This directory contains the Drosophila virilis 12 July 2004 assembly 
from Agencourt Bioscience Corporation. The annotations were generated 
by UCSC and collaborators worldwide.

Files included in this directory (updated nightly):

  - *.sql files: the MySQL commands used to create the tables.
    To see descriptions of the tables underlying Genome Browser annotation
    tracks, select the table in the Table Browser:
      http://genome.ucsc.edu/cgi-bin/hgTables?db=droVir1
    and click the "describe table schema" button.  There is also a "view
    table schema" link on the configuration page for each track.

  - *.txt.gz files: the database tables in a tab-delimited format 
    compressed with gzip. 

----------------------------------------------------------------
If you plan to download a large file or multiple files from 
this directory, we recommend that you use ftp rather than 
downloading the files via our website. To do so, ftp to 
hgdownload.cse.ucsc.edu, then go to the directory 
goldenPath/droVir1/database. To download multiple files, 
use the "mget" command:

    mget <filename1> <filename2> ...
    - or -
    mget -a (to download all the files in the directory) 

All the annotations in this directory are freely usable for any 
purpose. The D. virilis data have been freely provided by Agencourt
Bioscience Corporation before publication for use in the UCSC Genome 
Browser with the following understanding: 

1. The data may be freely downloaded, used in analyses, and repackaged in
   databases. 

2. Users are free to use the data in scientific papers analyzing particular 
   genes and regions, provided that the Agencourt is properly acknowledged. 

3. Agencourt reserves the right to publish the initial large-scale analyses 
   of the dataset, including large-scale identification of regions of 
   evolutionary conservation and large-scale genomic assembly. 

4. Any redistribution of the data should carry this notice. 


      Name                     Last modified      Size  Description
Parent Directory - bigFiles.txt.gz 2021-06-13 03:13 33 grp.txt.gz 2014-03-02 03:40 223 history.txt.gz 2004-12-13 17:18 231 gbDelete_tmp.sql 2013-10-01 12:48 326 genscanPep.sql 2013-10-01 12:48 330 chromInfo.sql 2013-10-01 12:48 396 history.sql 2013-10-01 12:48 537 gcPercent.sql 2013-10-01 12:48 546 chainDm2Link.sql 2013-10-01 12:48 577 hgFindSpec.txt.gz 2021-06-10 16:52 611 gap.sql 2013-10-01 12:48 722 genscan.sql 2013-10-01 12:48 748 chainDm2.sql 2013-10-01 12:48 878 geneid.sql 2013-10-01 12:48 1.0K rmsk.sql 2013-10-01 12:48 1.1K simpleRepeat.sql 2013-10-01 12:48 1.1K netDm2.sql 2013-10-01 12:48 1.3K blastDm2FB.sql 2013-10-01 12:48 1.3K bigFiles.sql 2021-06-13 03:13 1.4K grp.sql 2014-03-02 03:40 1.4K tableDescriptions.sql 2019-07-21 03:41 1.4K microsat.sql 2015-08-23 15:22 1.5K tableList.sql 2021-06-13 03:13 1.6K gbLoaded.sql 2020-08-21 14:38 1.6K xenoRefFlat.sql 2020-08-21 14:38 1.7K hgFindSpec.sql 2021-06-10 16:52 1.8K mrnaOrientInfo.sql 2020-08-21 14:18 1.8K mrnaOrientInfo.txt.gz 2020-08-21 14:18 1.8K tableList.txt.gz 2021-06-13 03:13 1.9K xenoRefGene.sql 2020-08-21 14:38 1.9K augustusGene.sql 2015-07-26 13:01 1.9K trackDb.sql 2021-06-10 16:52 2.1K all_mrna.sql 2020-08-21 14:18 2.1K xenoRefSeqAli.sql 2020-08-21 14:38 2.1K xenoMrna.sql 2016-02-21 14:46 2.4K tableDescriptions.txt.gz 2019-07-21 03:41 4.4K all_mrna.txt.gz 2020-08-21 14:18 7.4K trackDb.txt.gz 2021-06-10 16:52 11K gbLoaded.txt.gz 2020-08-21 14:38 15K microsat.txt.gz 2015-08-23 15:22 34K gcPercent.txt.gz 2004-12-13 17:18 45K chromInfo.txt.gz 2004-12-13 17:17 75K gap.txt.gz 2004-12-13 17:17 86K gbDelete_tmp.txt.gz 2005-09-27 05:01 159K augustusGene.txt.gz 2015-07-26 13:01 737K genscan.txt.gz 2005-01-09 04:35 871K geneid.txt.gz 2005-09-23 04:49 1.3M blastDm2FB.txt.gz 2005-07-28 05:23 1.4M simpleRepeat.txt.gz 2004-12-13 17:18 2.3M genscanPep.txt.gz 2004-12-13 17:18 5.1M rmsk.txt.gz 2004-12-13 17:18 5.2M netDm2.txt.gz 2006-01-19 06:03 8.3M chainDm2.txt.gz 2006-01-19 06:00 10M xenoRefFlat.txt.gz 2020-08-21 14:38 13M xenoRefSeqAli.txt.gz 2020-08-21 14:38 14M xenoRefGene.txt.gz 2020-08-21 14:38 14M chainDm2Link.txt.gz 2006-01-19 06:02 76M xenoMrna.txt.gz 2016-02-21 14:46 134M