This directory contains a dump of the UCSC genome annotation 
database for the Mar. 2004 freeze of the C. elegans genome from 
WormBase (ftp://ftp.sanger.ac.uk/pub/wormbase/WS120/CHROMOSOMES/). 

Files included in this directory (updated nightly):

  - *.sql files: the MySQL commands used to create the tables.
    To see descriptions of the tables underlying Genome Browser annotation
    tracks, select the table in the Table Browser:
      http://genome.ucsc.edu/cgi-bin/hgTables?db=ce2
    and click the "describe table schema" button.  There is also a "view
    table schema" link on the configuration page for each track.

  - *.txt.gz files: the database tables in a tab-delimited format 
    compressed with gzip. 

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If you plan to download a large file or multiple files from this 
directory, we recommend that you use ftp rather than downloading the 
files via our website. To do so, ftp to hgdownload.cse.ucsc.edu, 
then go to the directory goldenPath/ce2/database/. To download multiple 
files, use the "mget" command:

    mget <filename1> <filename2> ...
    - or -
    mget -a (to download all the files in the directory) 

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All the tables in this directory are freely available for public use.
The C. elegans sequence is made freely available to the community by the
Genome Sequencing Center at the WUSTL School of Medicine. Please see the
WUSTL data use policy at http://genome.wustl.edu/data.cgi for data use
restrictions and citation information.
      Name                        Last modified      Size  Description
Parent Directory - all_est.sql 2016-06-05 09:18 2.4K all_est.txt.gz 2016-06-05 09:18 14M all_mrna.sql 2020-08-21 06:07 2.4K all_mrna.txt.gz 2020-08-21 06:07 309K augustusGene.sql 2015-07-26 11:22 1.9K augustusGene.txt.gz 2015-07-26 11:22 1.3M axtNetCb1.sql 2013-10-01 12:48 661 axtNetCb1.txt.gz 2004-05-10 10:43 1.6M bigFiles.sql 2021-05-16 03:08 1.4K bigFiles.txt.gz 2021-05-16 03:08 33 blastHg16KG.sql 2013-10-01 12:48 1.3K blastHg16KG.txt.gz 2004-09-28 10:05 600K blatFr1.sql 2013-10-01 12:48 1.3K blatFr1.txt.gz 2004-05-10 10:43 1.6M c_briggsae_pwMaf.sql 2013-10-01 12:48 666 c_briggsae_pwMaf.txt.gz 2004-09-28 10:05 1.6M chrIII_blastzCb1.sql 2013-10-01 12:48 1.3K chrIII_blastzCb1.txt.gz 2004-05-10 10:43 10M chrIII_chainCb1.sql 2013-10-01 12:48 861 chrIII_chainCb1.txt.gz 2004-05-10 10:43 3.6M chrIII_chainCb1Link.sql 2013-10-01 12:48 584 chrIII_chainCb1Link.txt.gz 2004-05-10 10:43 8.6M chrIII_chainSelf.sql 2013-10-01 12:48 863 chrIII_chainSelf.txt.gz 2004-05-21 05:06 1.4M chrIII_chainSelfLink.sql 2013-10-01 12:48 586 chrIII_chainSelfLink.txt.gz 2004-05-21 05:05 11M chrIII_est.sql 2016-06-05 09:18 2.4K chrIII_est.txt.gz 2016-06-05 09:18 2.3M chrIII_gap.sql 2013-10-01 12:48 713 chrIII_gap.txt.gz 2004-05-10 10:44 123 chrIII_gold.sql 2013-10-01 12:48 790 chrIII_gold.txt.gz 2004-05-10 10:44 6.9K chrIII_intronEst.sql 2016-06-05 09:18 2.4K chrIII_intronEst.txt.gz 2016-06-05 09:18 1.9M chrIII_mrna.sql 2020-08-21 06:07 2.4K chrIII_mrna.txt.gz 2020-08-21 06:07 40K chrIII_rmsk.sql 2013-10-01 12:48 1.1K chrIII_rmsk.txt.gz 2004-05-10 10:44 392K chrIII_wabaCbr.sql 2013-10-01 12:48 575 chrIII_wabaCbr.txt.gz 2004-05-10 10:44 2.2M chrII_blastzCb1.sql 2013-10-01 12:48 1.3K chrII_blastzCb1.txt.gz 2004-05-10 10:44 10M chrII_chainCb1.sql 2013-10-01 12:48 859 chrII_chainCb1.txt.gz 2004-05-10 10:44 3.5M chrII_chainCb1Link.sql 2013-10-01 12:48 582 chrII_chainCb1Link.txt.gz 2004-05-10 10:44 9.1M chrII_chainSelf.sql 2013-10-01 12:48 861 chrII_chainSelf.txt.gz 2004-05-21 05:06 1.3M chrII_chainSelfLink.sql 2013-10-01 12:48 584 chrII_chainSelfLink.txt.gz 2004-05-21 05:05 9.3M chrII_est.sql 2016-06-05 09:18 2.4K chrII_est.txt.gz 2016-06-05 09:18 2.5M chrII_gap.sql 2013-10-01 12:48 711 chrII_gap.txt.gz 2004-05-10 10:45 93 chrII_gold.sql 2013-10-01 12:48 788 chrII_gold.txt.gz 2004-05-10 10:45 8.7K chrII_intronEst.sql 2016-06-05 09:18 2.4K chrII_intronEst.txt.gz 2016-06-05 09:18 2.1M chrII_mrna.sql 2020-08-21 06:07 2.4K chrII_mrna.txt.gz 2020-08-21 06:07 30K chrII_rmsk.sql 2013-10-01 12:48 1.0K chrII_rmsk.txt.gz 2004-05-10 10:45 347K chrII_wabaCbr.sql 2013-10-01 12:48 573 chrII_wabaCbr.txt.gz 2004-05-10 10:45 1.6M chrIV_blastzCb1.sql 2013-10-01 12:48 1.3K chrIV_blastzCb1.txt.gz 2004-05-10 10:45 11M chrIV_chainCb1.sql 2013-10-01 12:48 859 chrIV_chainCb1.txt.gz 2004-05-10 10:45 3.8M chrIV_chainCb1Link.sql 2013-10-01 12:48 582 chrIV_chainCb1Link.txt.gz 2004-05-10 10:45 10M chrIV_chainSelf.sql 2013-10-01 12:48 861 chrIV_chainSelf.txt.gz 2004-05-21 05:06 1.3M chrIV_chainSelfLink.sql 2013-10-01 12:48 584 chrIV_chainSelfLink.txt.gz 2004-05-21 05:05 7.0M chrIV_est.sql 2016-06-05 09:18 2.4K chrIV_est.txt.gz 2016-06-05 09:18 2.2M chrIV_gap.sql 2013-10-01 12:48 711 chrIV_gap.txt.gz 2004-05-10 10:46 34 chrIV_gold.sql 2013-10-01 12:48 788 chrIV_gold.txt.gz 2004-05-10 10:46 8.7K chrIV_intronEst.sql 2016-06-05 09:18 2.4K chrIV_intronEst.txt.gz 2016-06-05 09:18 1.7M chrIV_mrna.sql 2020-08-21 06:07 2.4K chrIV_mrna.txt.gz 2020-08-21 06:07 112K chrIV_rmsk.sql 2013-10-01 12:48 1.0K chrIV_rmsk.txt.gz 2004-05-10 10:46 381K chrIV_wabaCbr.sql 2013-10-01 12:48 573 chrIV_wabaCbr.txt.gz 2004-05-10 10:46 2.5M chrI_blastzCb1.sql 2013-10-01 12:48 1.3K chrI_blastzCb1.txt.gz 2004-05-10 10:46 9.6M chrI_chainCb1.sql 2013-10-01 12:48 857 chrI_chainCb1.txt.gz 2004-05-10 10:46 3.2M chrI_chainCb1Link.sql 2013-10-01 12:48 571 chrI_chainCb1Link.txt.gz 2004-06-01 07:23 8.2M chrI_chainSelf.sql 2013-10-01 12:48 859 chrI_chainSelf.txt.gz 2004-05-21 05:06 1.1M chrI_chainSelfLink.sql 2013-10-01 12:48 582 chrI_chainSelfLink.txt.gz 2004-05-21 05:05 7.9M chrI_est.sql 2016-06-05 09:18 2.4K chrI_est.txt.gz 2016-06-05 09:18 2.9M chrI_gap.sql 2013-10-01 12:48 709 chrI_gap.txt.gz 2004-05-10 10:46 33 chrI_gold.sql 2013-10-01 12:48 786 chrI_gold.txt.gz 2004-05-10 10:46 7.9K chrI_intronEst.sql 2016-06-05 09:18 2.4K chrI_intronEst.txt.gz 2016-06-05 09:18 2.1M chrI_mrna.sql 2020-05-07 17:18 2.4K chrI_mrna.txt.gz 2020-05-07 17:18 40K chrI_rmsk.sql 2013-10-01 12:48 1.0K chrI_rmsk.txt.gz 2004-05-10 10:46 409K chrI_wabaCbr.sql 2013-10-01 12:48 571 chrI_wabaCbr.txt.gz 2004-05-10 10:46 1.5M chrM_blastzCb1.sql 2013-10-01 12:48 1.3K chrM_blastzCb1.txt.gz 2004-05-10 10:47 2.1K chrM_chainCb1.sql 2013-10-01 12:48 857 chrM_chainCb1.txt.gz 2004-05-10 10:47 393 chrM_chainCb1Link.sql 2013-10-01 12:48 580 chrM_chainCb1Link.txt.gz 2004-05-10 10:47 2.0K chrM_est.sql 2016-06-05 09:18 2.4K chrM_est.txt.gz 2016-06-05 09:18 50K chrM_gap.sql 2013-10-01 12:48 709 chrM_gap.txt.gz 2004-05-10 10:47 33 chrM_gold.sql 2013-10-01 12:48 786 chrM_gold.txt.gz 2004-05-10 10:47 64 chrM_intronEst.sql 2008-03-18 03:55 2.2K chrM_intronEst.txt.gz 2008-03-18 03:55 39 chrM_mrna.sql 2008-03-18 03:55 2.2K chrM_mrna.txt.gz 2008-03-18 03:55 34 chrM_rmsk.sql 2013-10-01 12:48 1.0K chrM_rmsk.txt.gz 2004-05-10 10:47 662 chrM_wabaCbr.sql 2013-10-01 12:48 571 chrM_wabaCbr.txt.gz 2004-05-10 10:47 412 chrV_blastzCb1.sql 2013-10-01 12:48 1.3K chrV_blastzCb1.txt.gz 2004-05-10 10:47 15M chrV_chainCb1.sql 2013-10-01 12:48 857 chrV_chainCb1.txt.gz 2004-05-10 10:47 5.2M chrV_chainCb1Link.sql 2013-10-01 12:48 580 chrV_chainCb1Link.txt.gz 2004-05-10 10:47 13M chrV_chainSelf.sql 2013-10-01 12:48 859 chrV_chainSelf.txt.gz 2004-05-21 05:06 1.5M chrV_chainSelfLink.sql 2013-10-01 12:48 582 chrV_chainSelfLink.txt.gz 2004-05-21 05:06 10M chrV_est.sql 2016-06-05 09:18 2.4K chrV_est.txt.gz 2016-06-05 09:18 2.2M chrV_gap.sql 2013-10-01 12:48 709 chrV_gap.txt.gz 2004-05-10 10:48 33 chrV_gold.sql 2013-10-01 12:48 786 chrV_gold.txt.gz 2004-05-10 10:48 12K chrV_intronEst.sql 2016-06-05 09:18 2.4K chrV_intronEst.txt.gz 2016-06-05 09:18 1.8M chrV_mrna.sql 2018-01-07 06:38 2.4K chrV_mrna.txt.gz 2018-01-07 06:38 40K chrV_rmsk.sql 2013-10-01 12:48 1.0K chrV_rmsk.txt.gz 2004-05-10 10:48 456K chrV_wabaCbr.sql 2013-10-01 12:48 571 chrV_wabaCbr.txt.gz 2004-05-10 10:48 1.8M chrX_blastzCb1.sql 2013-10-01 12:48 1.3K chrX_blastzCb1.txt.gz 2004-05-10 10:48 6.0M chrX_chainCb1.sql 2013-10-01 12:48 857 chrX_chainCb1.txt.gz 2004-05-10 10:48 1.7M chrX_chainCb1Link.sql 2013-10-01 12:48 580 chrX_chainCb1Link.txt.gz 2004-05-10 10:48 5.3M chrX_chainSelf.sql 2013-10-01 12:48 859 chrX_chainSelf.txt.gz 2004-05-21 05:06 874K chrX_chainSelfLink.sql 2013-10-01 12:48 582 chrX_chainSelfLink.txt.gz 2004-05-21 05:06 3.3M chrX_est.sql 2016-06-05 09:18 2.4K chrX_est.txt.gz 2016-06-05 09:18 1.8M chrX_gap.sql 2013-10-01 12:48 709 chrX_gap.txt.gz 2004-05-10 10:48 33 chrX_gold.sql 2013-10-01 12:48 786 chrX_gold.txt.gz 2004-05-10 10:48 11K chrX_intronEst.sql 2016-06-05 09:18 2.4K chrX_intronEst.txt.gz 2016-06-05 09:18 1.4M chrX_mrna.sql 2020-08-21 06:07 2.4K chrX_mrna.txt.gz 2020-08-21 06:07 47K chrX_rmsk.sql 2013-10-01 12:48 1.0K chrX_rmsk.txt.gz 2004-05-10 10:48 289K chrX_wabaCbr.sql 2013-10-01 12:48 571 chrX_wabaCbr.txt.gz 2004-05-10 10:48 1.0M chromInfo.sql 2013-10-01 12:48 401 chromInfo.txt.gz 2004-05-10 10:48 140 dmBlastTab.sql 2007-08-30 18:04 1.6K dmBlastTab.txt.gz 2007-08-30 18:04 111K drBlastTab.sql 2010-04-04 10:26 1.8K drBlastTab.txt.gz 2010-04-04 10:26 291K estOrientInfo.sql 2016-06-05 09:18 1.9K estOrientInfo.txt.gz 2016-06-05 09:18 4.0M extFile.sql 2013-10-01 12:48 441 extFile.txt.gz 2004-09-28 10:05 295 gbLoaded.sql 2020-08-21 06:44 1.7K gbLoaded.txt.gz 2020-08-21 06:44 217K gc5Base.sql 2013-10-01 12:48 896 gc5Base.txt.gz 2004-05-10 10:48 385K geneid.sql 2013-10-01 12:48 1.0K geneid.txt.gz 2005-03-26 05:08 1.3M geneidPep.sql 2013-10-01 12:48 324 geneidPep.txt.gz 2005-03-26 05:08 4.8M grp.sql 2014-03-02 03:40 1.4K grp.txt.gz 2014-03-02 03:40 223 hgBlastTab.sql 2007-04-08 09:42 1.6K hgBlastTab.txt.gz 2007-04-08 09:42 121K hgFindSpec.sql 2020-10-25 07:47 1.7K hgFindSpec.txt.gz 2020-10-25 07:47 1.0K history.sql 2010-07-04 14:53 1.5K history.txt.gz 2010-07-04 14:53 1.0K kimExpDistance.sql 2013-10-01 12:48 390 kimExpDistance.txt.gz 2004-06-07 07:34 118M miRNA.sql 2013-10-01 12:48 776 miRNA.txt.gz 2004-05-10 10:48 2.3K microsat.sql 2015-08-23 12:09 1.5K microsat.txt.gz 2015-08-23 12:09 3.0K mmBlastTab.sql 2013-10-01 12:48 798 mmBlastTab.txt.gz 2006-05-26 05:31 280K mrnaOrientInfo.sql 2020-08-21 06:44 1.9K mrnaOrientInfo.txt.gz 2020-08-21 06:44 828K netCb1.sql 2013-10-01 12:48 1.3K netCb1.txt.gz 2004-05-10 10:48 4.4M orfToGene.sql 2013-10-01 12:48 371 orfToGene.txt.gz 2004-05-10 10:48 103K phastCons.sql 2013-10-01 12:48 891 phastCons.txt.gz 2004-09-28 10:05 2.3M phastConsElements.sql 2013-10-01 12:48 651 phastConsElements.txt.gz 2004-09-28 10:05 1.0M picTar.sql 2013-10-01 12:48 747 picTar.txt.gz 2006-04-28 03:42 117K refFlat.sql 2020-08-21 06:39 1.9K refFlat.txt.gz 2020-08-21 06:39 2.1M refGene.sql 2020-08-21 06:36 1.8K refGene.txt.gz 2020-08-21 06:36 1.9M refSeqAli.sql 2020-08-21 06:44 2.4K refSeqAli.txt.gz 2020-08-21 06:44 2.7M rnBlastTab.sql 2006-07-22 11:29 1.6K rnBlastTab.txt.gz 2006-07-22 11:29 236K rnaCluster.sql 2013-10-01 12:48 953 rnaCluster.txt.gz 2004-05-10 10:48 349K sangerBlastTab.sql 2013-10-01 12:48 806 sangerBlastTab.txt.gz 2004-06-07 07:35 19M sangerCanonical.sql 2013-10-01 12:48 610 sangerCanonical.txt.gz 2004-06-07 07:35 341K sangerGene.sql 2013-10-01 12:48 833 sangerGene.txt.gz 2004-05-27 05:10 1.2M sangerGenefinder.sql 2013-10-01 12:48 1.1K sangerGenefinder.txt.gz 2004-05-12 05:11 1.2M sangerIsoforms.sql 2013-10-01 12:48 403 sangerIsoforms.txt.gz 2004-06-07 07:35 106K sangerLinks.sql 2013-10-01 12:48 426 sangerLinks.txt.gz 2004-05-27 05:10 539K sangerPep.sql 2013-10-01 12:48 333 sangerPep.txt.gz 2004-05-27 05:10 4.8M sangerToKim.sql 2013-10-01 12:48 373 sangerToKim.txt.gz 2004-06-07 07:35 100K sangerToPfam.sql 2013-10-01 12:48 368 sangerToPfam.txt.gz 2004-06-07 07:35 69K sangerToRefSeq.sql 2013-10-01 12:48 379 sangerToRefSeq.txt.gz 2004-06-07 07:35 110K seq.sql 2013-10-01 12:48 596 seq.txt.gz 2004-05-10 10:48 232K simpleRepeat.sql 2013-10-01 12:48 1.1K simpleRepeat.txt.gz 2004-05-10 10:48 822K tableDescriptions.sql 2021-01-14 06:34 1.4K tableDescriptions.txt.gz 2021-01-14 06:34 6.4K tableList.sql 2021-05-16 03:08 1.6K tableList.txt.gz 2021-05-16 03:08 6.5K trackDb.sql 2020-10-25 07:47 2.0K trackDb.txt.gz 2020-10-25 07:47 23K twinscan.sql 2013-10-01 12:48 1.0K twinscan.txt.gz 2004-05-10 10:48 1.1M twinscanPep.sql 2013-10-01 12:48 337 twinscanPep.txt.gz 2004-05-10 10:48 4.3M wabaCbr.sql 2013-10-01 12:48 832 wabaCbr.txt.gz 2004-05-10 10:51 130M wormP2P.sql 2013-10-01 12:48 353 wormP2P.txt.gz 2005-06-16 04:54 473K xenoRefFlat.sql 2020-08-21 06:44 1.7K xenoRefFlat.txt.gz 2020-08-21 06:44 1.5M xenoRefGene.sql 2020-08-21 06:44 1.9K xenoRefGene.txt.gz 2020-08-21 06:44 1.7M xenoRefSeqAli.sql 2020-08-21 06:44 2.1K xenoRefSeqAli.txt.gz 2020-08-21 06:44 1.7M