Chromosome 15 - BAC End Pairs

Chromosome 15 - BAC End Pairs - Single Contig

Description of this page

Main Reports Page

Main Assembly Page

Main BAC End Pairs Page

Whole Chromosome

Single Contigs

Line color code:

White: lists number of confirming clone bridges for this accession
Blue: clone bridges two adjacent contigs
Green: clone bridges close contigs
Pink: multiple clones bridge distant regions on same chromosome
Red: multiple clones bridge regions on different chromosomes

NT_010362	NT_037852	NT_033275	NT_035354	NT_010346	NT_026446	NT_024683	NT_010280
NT_033278	NT_010363	NT_037853	NT_030828	NT_010194	NT_037854	NT_037855	NT_010265
NT_024654	NT_037856	NT_010356	NT_019601	NT_024670	NT_033276	NT_033277	NT_037857
NT_010274	NT_037858	NT_037859	NT_035324	NT_035325

NT_010356

Links	Contig1	Acc1	Start1	Phs	BAC End Acc1	Or1	Chr2	Contig2	Acc2	Start2	Phs	BAC End Acc2	Or2	Clone
S/G/Y/R/B/O	NT_010356	AC011944	72309598	3										4 confirm
S/G/Y/R/B/O	NT_010356	AC011944	72336138	3	AQ668673	-1	chr15	NT_024654	AC022748	72055498	3	AQ608937	1	RP11-1001M11
S/G/Y/R/B/O	NT_010356	AC011944	72372948	3	AQ623935	-1	chr15	NT_024654	AC022748	72108040	3	AQ820287	1	RP11-892E4
S/G/Y/R/B/O	NT_010356	AC011944	72371488	3	AQ613400	-1	chr15	NT_024654	AC022748	72134103	3	AQ441250	1	RP11-705H1
S/G/Y/R/B/O	NT_010356	AC104231	72475907	3										2 confirm
S/G/Y/R/B/O	NT_010356	AC069082	72512448	3										17 confirm
S/G/Y/R/B/O	NT_010356	AC011797	72675981	3										17 confirm
S/G/Y/R/B/O	NT_010356	AC027811	72770168	3										15 confirm
S/G/Y/R/B/O	NT_010356	AC105231	72877167	3										15 confirm
S/G/Y/R/B/O	NT_010356	AC023968	72984127	3										17 confirm
S/G/Y/R/B/O	NT_010356	AC026826	73157713	3										9 confirm
S/G/Y/R/B/O	NT_010356	AC021483	73245127	3										9 confirm
S/G/Y/R/B/O	NT_010356	AC015871	73321077	3										14 confirm
S/G/Y/R/B/O	NT_010356	AC092701	73450253	3										14 confirm
S/G/Y/R/B/O	NT_010356	AC087761	73570285	3										12 confirm
S/G/Y/R/B/O	NT_010356	AC012337	73724025	3										5 confirm
S/G/Y/R/B/O	NT_010356	AC016705	73767343	3										22 confirm
S/G/Y/R/B/O	NT_010356	AC108451	73911436	3										14 confirm
S/G/Y/R/B/O	NT_010356	AC108450	73980423	3										21 confirm
S/G/Y/R/B/O	NT_010356	AC023302	74127366	3										17 confirm
S/G/Y/R/B/O	NT_010356	AC027808	74264946	3										14 confirm
S/G/Y/R/B/O	NT_010356	AC068870	74419622	3										9 confirm
S/G/Y/R/B/O	NT_010356	AC036196	74517476	3										12 confirm
S/G/Y/R/B/O	NT_010356	AC103858	74682819	3										19 confirm
S/G/Y/R/B/O	NT_010356	AC109809	74829180	3										7 confirm
S/G/Y/R/B/O	NT_010356	AC060809	74878263	3										20 confirm
S/G/Y/R/B/O	NT_010356	AC023034	75046659	3										10 confirm
S/G/Y/R/B/O	NT_010356	AC104041	75127036	3										15 confirm
S/G/Y/R/B/O	NT_010356	AC103976	75259986	3										14 confirm
S/G/Y/R/B/O	NT_010356	AC025219	75381581	3										2 confirm
S/G/Y/R/B/O	NT_010356	AC026956	75392486	3										25 confirm
S/G/Y/R/B/O	NT_010356	AC026956	75499370	3	AQ734504	1	chr15	NT_019601	AC103965	77827897	3	AQ734345	1	CTD-3112H11
S/G/Y/R/B/O	NT_010356	AC026956	75535672	3	AQ323605	1	chr15	NT_019601	AC103965	77802148	3	AQ323607	1	RP11-94F22
S/G/Y/R/B/O	NT_010356	AC026956	75571949	3	AZ301275	1	chr15	NT_019601	AC044860	79020012	3	AZ301276	1	RP11-559G12
S/G/Y/R/B/O	NT_010356	AC037480	75588404	1										0 confirm
S/G/Y/R/B/O	NT_010356	AC026624	75608006	1										16 confirm
S/G/Y/R/B/O	NT_010356	AC026624	75647842	1	AQ706041	-1	chr15	NT_019601	AC103965	77885612	3	AQ685861	1	RP11-1126C3
S/G/Y/R/B/O	NT_010356	AC026624	75655605	1	AQ516662	1	chr15	NT_019601	AC010725	78049323	3	AQ511810	1	RP11-699A17
S/G/Y/R/B/O	NT_010356	AC026624	75658511	1	AQ211538	1	chr15	NT_019601	AC010725	77927978	3	AQ209708	1	CTD-3235D24
S/G/Y/R/B/O	NT_010356	AC026624	75658511	1	AQ211538	1	chr15	NT_019601	AC010725	78007068	3	AQ209708	1	CTD-3235D24
S/G/Y/R/B/O	NT_010356	AC026624	75658511	1	AQ211538	1	chr15	NT_019601	AC005630	78309027	3	AQ209708	-1	CTD-3235D24
S/G/Y/R/B/O	NT_010356	AC026624	75658511	1	AQ211538	1	chr15	NT_019601	AC005630	78457781	3	AQ209708	-1	CTD-3235D24
S/G/Y/R/B/O	NT_010356	AC108000	75675875	3										17 confirm
S/G/Y/R/B/O	NT_010356	AC108000	75675807	3	AQ818910	1	chr15	NT_019601	AC115102	78054016	3	AQ799837	1	RP11-867A2
S/G/Y/R/B/O	NT_010356	AC108000	75675807	3	AQ818910	1	chr15	NT_019601	AC005630	78332167	3	AQ799837	-1	RP11-867A2
S/G/Y/R/B/O	NT_010356	AC108000	75675875	3	AQ708886	1	chr15	NT_019601	AC103965	77882877	3	AQ700944	-1	CTD-2116G1
S/G/Y/R/B/O	NT_010356	AC108000	75682097	3	AQ054295	1	chr15	NT_019601	AC103965	77882963	3	AQ054294	-1	CTD-2338I10
S/G/Y/R/B/O	NT_010356	AC108000	75682097	3	AQ054295	1	chr15	NT_019601	AC115102	78062538	3	AQ054294	1	CTD-2338I10
S/G/Y/R/B/O	NT_010356	AC108000	75683388	3	B63469	1	chr15	NT_019601	AC010725	78029144	3	AZ516913	1	RP11-5H6
S/G/Y/R/B/O	NT_010356	AC108000	75683388	3	B63469	1	chr15	NT_019601	AC005630	78357024	3	AZ516913	-1	RP11-5H6

NT_010356 (cont)

Links	Contig1	Acc1	Start1	Phs	BAC End Acc1	Or1	Chr2	Contig2	Acc2	Start2	Phs	BAC End Acc2	Or2	Clone
S/G/Y/R/B/O	NT_010356	AC108000	75692764	3	AQ594084	1	chr15	NT_019601	AC027807	77608204	3	AQ699947	1	RP11-910C4
S/G/Y/R/B/O	NT_010356	AC108000	75727428	3	AQ464440	1	chr15	NT_019601	AC116157	77584351	3	AQ432472	1	RP11-679A9
S/G/Y/R/B/O	NT_010356	AC108000	75731428	3	AQ474976	1	chr15	NT_019601	AC116157	77545313	3	AQ474973	1	RP11-2591P8
S/G/Y/R/B/O	NT_010356	AC108000	75731450	3	B91811	-1	chr15	NT_019601	AC103965	77836860	3	B91812	-1	CTD-2164I3
S/G/Y/R/B/O	NT_010356	AC108000	75731453	3	AQ523451	1	chr15	NT_019601	AC116157	77584351	3	AQ556419	1	RP11-806J8
S/G/Y/R/B/O	NT_010356	AC108000	75732137	3	B16318	1	chr15	NT_019601	AC027807	77666592	3	B16317	1	CTA-347O16
S/G/Y/R/B/O	NT_010356	AC108000	75739842	3	AZ519296	1	chr15	NT_019601	AC010725	77937183	3	AQ283356	1	RP11-91F21
S/G/Y/R/B/O	NT_010356	AC108000	75739842	3	AZ519296	1	chr15	NT_019601	AC010725	78016251	3	AQ283356	1	RP11-91F21
S/G/Y/R/B/O	NT_010356	AC108000	75739842	3	AZ519296	1	chr15	NT_019601	AC005630	78369779	3	AQ283356	-1	RP11-91F21
S/G/Y/R/B/O	NT_010356	AC108000	75739842	3	AZ519296	1	chr15	NT_019601	AC005630	78448530	3	AQ283356	-1	RP11-91F21
S/G/Y/R/B/O	NT_010356	AC108000	75771667	3	AQ164437	1	chr15	NT_019601	AC115102	78088539	3	AQ089000	-1	CTD-2200H20
S/G/Y/R/B/O	NT_010356	AC108000	75771667	3	AQ164437	1	chr15	NT_019601	AC044860	78940041	3	AQ089000	1	CTD-2200H20
S/G/Y/R/B/O	NT_010356	AC108000	75782834	3	AQ164982	-1	chr15	NT_019601	AC044860	79054417	3	AQ091973	-1	CTD-3016G1
S/G/Y/R/B/O	NT_010356	AC108000	75791788	3	AQ420819	1	chr15	NT_019601	AC027078	78838854	3	AQ420818	1	RP11-205L7
S/G/Y/R/B/O	NT_010356	AC108000	75806192	3	AQ471651	-1	chr15	NT_019601	AC027807	77760290	3	AQ471649	1	RP11-2587J23
S/G/Y/R/B/O	NT_010356	AC108000	75806371	3	AQ418681	1	chr15	NT_019601	AC027078	78844115	3	AQ418683	1	RP11-203B11
S/G/Y/R/B/O	NT_010356	AC108000	75806397	3	B75215	1	chr15	NT_019601	AC027807	77748510	3	B75216	1	RP11-14C9
S/G/Y/R/B/O	NT_010356	AC108000	75814484	3	AQ059213	1	chr15	NT_019601	AC027078	78843585	3	AQ059211	1	CTD-2348B18
S/G/Y/R/B/O	NT_010356	AC108000	75828094	3	AQ244566	-1	chr15	NT_019601	AC027807	77782267	3	AQ235269	-1	CTD-2053J3
S/G/Y/R/B/O	NT_010356	AC126339	75843562	2										0 confirm
S/G/Y/R/B/O	NT_010356	AC127482	75844333	1										0 confirm
S/G/Y/R/B/O	NT_010356	AC127482	75847854	1	AQ767784	-1	chr15	NT_019601	AC087286	79361537	3	AQ786571	-1	CTD-3086J21
S/G/Y/R/B/O	NT_010356	AC127482	75848528	1	AQ059213	-1	chr15	NT_019601	AC027078	78843585	3	AQ059211	1	CTD-2348B18
S/G/Y/R/B/O	NT_010356	AC127482	75863304	1	AQ744315	1	chr15	NT_019601	AC027807	77756244	3	AQ745160	1	RP11-1078E2
S/G/Y/R/B/O	NT_010356	AC011295	75874892	3										15 confirm
S/G/Y/R/B/O	NT_010356	AC011295	75879162	3	AQ471651	-1	chr15	NT_019601	AC027807	77760290	3	AQ471649	1	RP11-2587J23
S/G/Y/R/B/O	NT_010356	AC011295	75879350	3	AQ418681	1	chr15	NT_019601	AC027078	78844115	3	AQ418683	1	RP11-203B11
S/G/Y/R/B/O	NT_010356	AC011295	75879376	3	B75215	1	chr15	NT_019601	AC027807	77748510	3	B75216	1	RP11-14C9
S/G/Y/R/B/O	NT_010356	AC011295	75892974	3	AQ141951	-1	chr15	NT_019601	AC103965	77824960	3	AQ212920	1	CTD-3173M10
S/G/Y/R/B/O	NT_010356	AC011295	75920551	3	AQ798754	-1	chr15	NT_019601	AC044860	79070962	3	AQ808073	-1	CTD-2169B19
S/G/Y/R/B/O	NT_010356	AC011295	75920611	3	AQ307703	-1	chr15	NT_019601	AC044860	79059399	3	AQ307558	-1	CTD-2183B19
S/G/Y/R/B/O	NT_010356	AC011295	75920624	3	AQ031391	-1	chr15	NT_019601	AC044860	79059491	3	AQ033147	-1	CTD-2222G4
S/G/Y/R/B/O	NT_010356	AC011295	75932570	3	AQ615408	-1	chr15	NT_019601	AC103965	77844359	3	AQ615564	1	RP11-720B5
S/G/Y/R/B/O	NT_010356	AC011295	75958364	3	AQ418681	1	chr15	NT_019601	AC027078	78844115	3	AQ418683	1	RP11-203B11
S/G/Y/R/B/O	NT_010356	AC011295	75958390	3	B75215	1	chr15	NT_019601	AC027807	77748510	3	B75216	1	RP11-14C9
S/G/Y/R/B/O	NT_010356	AC011295	75966492	3	AQ059213	1	chr15	NT_019601	AC027078	78843585	3	AQ059211	1	CTD-2348B18
S/G/Y/R/B/O	NT_010356	AC011295	75980145	3	AQ244566	-1	chr15	NT_019601	AC027807	77782267	3	AQ235269	-1	CTD-2053J3
S/G/Y/R/B/O	NT_010356	AC011295	75998948	3	B41911	-1	chr15	NT_019601	AC087732	78196836	1	B41910	-1	CTC-776L1
S/G/Y/R/B/O	NT_010356	AC011295	76005188	3	AQ394285	1	chr15	NT_019601	AC044860	79000681	3	AQ394282	-1	RP11-2547M4
S/G/Y/R/B/O	NT_010356	AC010724	76023590	3										11 confirm
S/G/Y/R/B/O	NT_010356	AC010724	76026939	3	AQ144191	1	chr15	NT_019601	AC103965	77833863	3	AQ147671	1	CTD-3076N18
S/G/Y/R/B/O	NT_010356	AC010724	76040612	3	AQ744315	-1	chr15	NT_019601	AC027807	77756244	3	AQ745160	1	RP11-1078E2
S/G/Y/R/B/O	NT_010356	AC010724	76050335	3	AQ615408	1	chr15	NT_019601	AC103965	77844359	3	AQ615564	1	RP11-720B5
S/G/Y/R/B/O	NT_010356	AC010724	76062371	3	AQ307703	1	chr15	NT_019601	AC044860	79059399	3	AQ307558	-1	CTD-2183B19
S/G/Y/R/B/O	NT_010356	AC010724	76062378	3	AQ798754	1	chr15	NT_019601	AC044860	79070962	3	AQ808073	-1	CTD-2169B19
S/G/Y/R/B/O	NT_010356	AC010724	76062390	3	AQ031391	1	chr15	NT_019601	AC044860	79059491	3	AQ033147	-1	CTD-2222G4
S/G/Y/R/B/O	NT_010356	AC010724	76090043	3	AQ141951	1	chr15	NT_019601	AC103965	77824960	3	AQ212920	1	CTD-3173M10
S/G/Y/R/B/O	NT_010356	AC010724	76097262	3	B15992	-1	chr15	NT_019601	AC010725	78046200	3	B15991	-1	CTA-346K3
S/G/Y/R/B/O	NT_010356	AC010724	76097262	3	B15992	-1	chr15	NT_019601	AC005630	78340156	3	B15991	1	CTA-346K3
S/G/Y/R/B/O	NT_010356	AC010724	76106117	3	AQ767784	-1	chr15	NT_019601	AC087286	79361537	3	AQ786571	-1	CTD-3086J21

NT_010356 (cont)

Links	Contig1	Acc1	Start1	Phs	BAC End Acc1	Or1	Chr2	Contig2	Acc2	Start2	Phs	BAC End Acc2	Or2	Clone
S/G/Y/R/B/O	NT_010356	AC010724	76114798	3	AQ418681	-1	chr15	NT_019601	AC027078	78844115	3	AQ418683	1	RP11-203B11
S/G/Y/R/B/O	NT_010356	AC010724	76106791	3	AQ059213	-1	chr15	NT_019601	AC027078	78843585	3	AQ059211	1	CTD-2348B18
S/G/Y/R/B/O	NT_010356	AC010724	76114905	3	B75215	-1	chr15	NT_019601	AC027807	77748510	3	B75216	1	RP11-14C9
S/G/Y/R/B/O	NT_010356	AC110291	76126622	3										17 confirm
S/G/Y/R/B/O	NT_010356	AC110291	76131183	3	AQ030655	-1	chr15	NT_019601	AC010725	77913416	3	AQ177270	-1	CTD-2192A23
S/G/Y/R/B/O	NT_010356	AC110291	76131183	3	AQ030655	-1	chr15	NT_019601	AC010725	77992505	3	AQ177270	-1	CTD-2192A23
S/G/Y/R/B/O	NT_010356	AC110291	76131183	3	AQ030655	-1	chr15	NT_019601	AC005630	78393561	3	AQ177270	1	CTD-2192A23
S/G/Y/R/B/O	NT_010356	AC110291	76131183	3	AQ030655	-1	chr15	NT_019601	AC044860	78957319	3	AQ177270	1	CTD-2192A23
S/G/Y/R/B/O	NT_010356	AC110291	76131185	3	AQ030654	-1	chr15	NT_019601	AC010725	77913409	3	AQ177269	-1	CTD-2192A21
S/G/Y/R/B/O	NT_010356	AC110291	76131185	3	AQ030654	-1	chr15	NT_019601	AC010725	77992498	3	AQ177269	-1	CTD-2192A21
S/G/Y/R/B/O	NT_010356	AC110291	76131185	3	AQ030654	-1	chr15	NT_019601	AC005630	78393591	3	AQ177269	1	CTD-2192A21
S/G/Y/R/B/O	NT_010356	AC110291	76131185	3	AQ030654	-1	chr15	NT_019601	AC044860	78957349	3	AQ177269	1	CTD-2192A21
S/G/Y/R/B/O	NT_010356	AC110291	76196541	3	AQ078709	-1	chr15	NT_019601	AC010725	77970576	3	AQ078712	-1	CTD-2368N8
S/G/Y/R/B/O	NT_010356	AC110291	76196541	3	AQ078709	-1	chr15	NT_019601	AC005630	78415639	3	AQ078712	1	CTD-2368N8
S/G/Y/R/B/O	NT_010356	AC110291	76196541	3	AQ078709	-1	chr15	NT_019601	AC044860	78979431	3	AQ078712	1	CTD-2368N8
S/G/Y/R/B/O	NT_010356	AC110291	76218865	3	AQ282541	-1	chr15	NT_019601	AC010725	77927441	3	AZ518715	-1	RP11-91O13
S/G/Y/R/B/O	NT_010356	AC110291	76218865	3	AQ282541	-1	chr15	NT_019601	AC010725	78006531	3	AZ518715	-1	RP11-91O13
S/G/Y/R/B/O	NT_010356	AC110291	76218865	3	AQ282541	-1	chr15	NT_019601	AC005630	78379478	3	AZ518715	1	RP11-91O13
S/G/Y/R/B/O	NT_010356	AC110291	76218865	3	AQ282541	-1	chr15	NT_019601	AC005630	78458287	3	AZ518715	1	RP11-91O13
S/G/Y/R/B/O	NT_010356	AC110291	76224051	3	AQ756104	-1	chr15	NT_019601	AC010725	77925617	3	AQ454830	-1	RP11-794G5
S/G/Y/R/B/O	NT_010356	AC110291	76224051	3	AQ756104	-1	chr15	NT_019601	AC010725	78004696	3	AQ454830	-1	RP11-794G5
S/G/Y/R/B/O	NT_010356	AC110291	76224051	3	AQ756104	-1	chr15	NT_019601	AC005630	78460131	3	AQ454830	1	RP11-794G5
S/G/Y/R/B/O	NT_010356	AC110291	76243417	3	AQ533462	-1	chr15	NT_019601	AC010725	77999678	3	AQ533460	-1	RP11-379H8
S/G/Y/R/B/O	NT_010356	AC110291	76243417	3	AQ533462	-1	chr15	NT_019601	AC005630	78465054	3	AQ533460	1	RP11-379H8
S/G/Y/R/B/O	NT_010356	AC105339	76243920	3										7 confirm
S/G/Y/R/B/O	NT_010356	AC105339	76287514	3	AQ106338	-1	chr15	NT_019601	AC010725	77948704	3	AQ099656	-1	CTD-3056K2
S/G/Y/R/B/O	NT_010356	AC105339	76287514	3	AQ106338	-1	chr15	NT_019601	AC005630	78437574	3	AQ099656	1	CTD-3056K2
S/G/Y/R/B/O	NT_010356	AC105339	76287514	3	AQ106338	-1	chr15	NT_019601	AC044860	79001371	3	AQ099656	1	CTD-3056K2
S/G/Y/R/B/O	NT_010356	AC105339	76318838	3	AQ762818	1	chr15	NT_019601	AC022558	76563748	3	AQ768439	-1	CTD-3188M15
S/G/Y/R/B/O	NT_010356	AC044907	76323275	3										6 confirm
S/G/Y/R/B/O	NT_010356	AC044907	76339836	3	AQ341662	1	chr15	NT_019601	AC022558	76609696	3	AQ341659	-1	RP11-120H20
S/G/Y/R/B/O	NT_010356	AC044907	76346957	3	AQ269142	1	chr15	NT_019601	AC022558	76616085	3	AQ269144	-1	RP11-69H19
S/G/Y/R/B/O	NT_010356	AC044907	76364824	3	AQ595851	1	chr15	NT_019601	AC022558	76614692	3	AQ604357	-1	CTD-2132H14
S/G/Y/R/B/O	NT_010356	AC044907	76390868	3	AQ663741	1	chr15	NT_019601	AC022558	76625582	3	AQ672390	-1	CTD-2276F22
S/G/Y/R/B/O	NT_010356	AC044907	76413258	3	AQ069389	1	chr15	NT_019601	AC022558	76659739	3	AQ071297	-1	CTD-2266H10
S/G/Y/R/B/O	NT_010356	AC044907	76426837	3	AQ350273	1	chr15	NT_019601	AC022558	76691558	3	AQ385580	-1	RP11-133L3
S/G/Y/R/B/O	NT_010356	AC044907	76438678	3	AZ517977	1	chr15	NT_019601	AC022558	76729982	3	AQ283516	-1	RP11-90B9
S/G/Y/R/B/O	NT_010356	AC044907	76465859	3	AZ518225	1	chr15	NT_019601	AC024270	76734544	3	AZ518226	-1	RP11-252H18