This directory contains the Build 35 finished human genome assembly (hg17, May 2004). The chromosomal sequences were assembled by the International Human Genome Project sequencing centers and verified by NCBI and UCSC. Files included in this directory: - chr*.fa.zip: compressed FASTA sequence of each chromosome. Each chromosome is in a separate file in a zipped Fasta format. Repeats -- which are shown in lower case -- are annotated by RepeatMasker run at the sensitive setting and Tandem Repeats Finder (repeats of period 12 or less). The main assembly is contained in the chrN.fa files, where N is the name of the chromosome. The chrN_random.fa files contain clones that are not yet finished or cannot be placed with certainty at a specific place on the chromosome. The two files: chr6_hla_hap1.fa.gz chr6_hla_hap2.fa.gz contain two different haplotypes of the human HLA region on chromosome 6. -------------------------------------------------------------------- If you plan to download a large file or multiple files from this directory, we recommend that you use ftp rather than downloading the files via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to the directory goldenPath/hg17/chromosomes. To download multiple files, use the "mget" command: mget <filename1> <filename2> ... - or - mget -a (to download all the files in the directory) All the files in this directory are freely available for public use.
Name Last modified Size Description
Parent Directory - chr1.fa.gz 2004-06-03 13:39 70M chr1_random.fa.gz 2004-06-03 13:39 1.0M chr2.fa.gz 2004-06-03 13:40 74M chr2_random.fa.gz 2004-06-03 13:40 115K chr3.fa.gz 2004-06-03 13:41 61M chr3_random.fa.gz 2004-06-03 13:41 247K chr4.fa.gz 2004-06-03 13:42 59M chr4_random.fa.gz 2004-06-03 13:42 247K chr5.fa.gz 2004-06-03 13:43 56M chr5_random.fa.gz 2004-06-03 13:43 47K chr6.fa.gz 2004-06-03 13:44 52M chr6_random.fa.gz 2004-06-03 13:44 587K chr7.fa.gz 2004-06-03 13:45 48M chr7_random.fa.gz 2004-06-03 13:45 200K chr8.fa.gz 2004-06-03 13:45 45M chr8_random.fa.gz 2004-06-03 13:45 165K chr9.fa.gz 2004-06-03 13:46 37M chr9_random.fa.gz 2004-06-03 13:46 270K chr10.fa.gz 2004-06-03 13:47 41M chr10_random.fa.gz 2004-06-03 13:47 35K chr11.fa.gz 2004-06-03 13:47 41M chr12.fa.gz 2004-06-03 13:48 41M chr12_random.fa.gz 2004-06-03 13:48 150K chr13.fa.gz 2004-06-03 13:48 30M chr13_random.fa.gz 2004-06-03 13:48 60K chr14.fa.gz 2004-06-03 13:49 28M chr15.fa.gz 2004-06-03 13:49 25M chr15_random.fa.gz 2004-06-03 13:49 187K chr16.fa.gz 2004-06-03 13:50 24M chr16_random.fa.gz 2004-06-03 13:50 33K chr17.fa.gz 2004-06-03 13:50 24M chr17_random.fa.gz 2004-06-03 13:50 574K chr18.fa.gz 2004-06-03 13:51 23M chr18_random.fa.gz 2004-06-03 13:51 1.4K chr19.fa.gz 2004-06-03 13:51 17M chr19_random.fa.gz 2004-06-03 13:51 69K chr20.fa.gz 2004-06-03 13:51 19M chr21.fa.gz 2004-06-03 13:51 11M chr22.fa.gz 2004-06-03 13:52 11M chr22_random.fa.gz 2004-06-03 13:52 67K chrX.fa.gz 2004-06-03 13:52 47M chrX_random.fa.gz 2004-06-03 13:52 467K chr6_hla_hap1.fa.gz 2004-06-03 13:53 45K chr6_hla_hap2.fa.gz 2004-06-03 13:53 49K chrM.fa.gz 2004-06-03 13:53 5.4K chrY.fa.gz 2004-06-03 13:53 7.7M md5sum.txt 2004-06-04 14:20 2.2K