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wgEncodeRikenCageA549CellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3422; labExpId=K16; bioRep=021WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapAlnRep1; type=bai; md5sum=6a1f2a4043e6ee827db74e49b69212f2; size=4.8M
wgEncodeRikenCageA549CellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3426; labExpId=K17; bioRep=022WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapAlnRep2; type=bam; md5sum=19b5a4f9929fe434cb11983a93433584; size=295M
wgEncodeRikenCageA549CellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3426; labExpId=K17; bioRep=022WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapAlnRep2; type=bai; md5sum=8382e9f1decfbe90bc25c2b19a8572a6; size=4.7M
wgEncodeRikenCageA549CellPapMinusSignalRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3481; geoSampleAccession=GSM849359; labExpId=K16; bioRep=021WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapMinusSignalRep1; type=bigWig; md5sum=cb45e712458ae6c29623d0e1cf7bc5b2; size=65M
wgEncodeRikenCageA549CellPapMinusSignalRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3482; geoSampleAccession=GSM849359; labExpId=K17; bioRep=022WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapMinusSignalRep2; type=bigWig; md5sum=cac38e9a81172791a918cdfb5c6775f3; size=53M
wgEncodeRikenCageA549CellPapPlusSignalRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3481; geoSampleAccession=GSM849359; labExpId=K16; bioRep=021WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapPlusSignalRep1; type=bigWig; md5sum=189929e27bbae8fbc603a66fd646e238; size=67M
wgEncodeRikenCageA549CellPapPlusSignalRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3482; geoSampleAccession=GSM849359; labExpId=K17; bioRep=022WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapPlusSignalRep2; type=bigWig; md5sum=286cb07c282eb64f4204349d61fa3678; size=55M
wgEncodeRikenCageA549CellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3422; geoSampleAccession=GSM849359; labExpId=K16; bioRep=021WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=6dc8e90ede3de081cd9391bddb3046c7; size=522M
wgEncodeRikenCageA549CellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=A549; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3426; geoSampleAccession=GSM849359; labExpId=K17; bioRep=022WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=5b90dc178a0d5c91d683b0d52fbc5eee; size=368M
wgEncodeRikenCageA549CellPapTssGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=A549; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4517; geoSampleAccession=GSM849359; labExpId=K16,K17; bioRep=021WC,022WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=52d88c27c4545855e132da2eeaecf85c; size=3.0M
wgEncodeRikenCageA549CellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=A549; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001158; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849359; labExpId=K16,K17; bioRep=021WC,022WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageA549CellPapTssHmm; type=bedRnaElements; md5sum=7b0f3d45b0bc364e95bd918c835fdae5; size=1.7M
wgEncodeRikenCageA549CytosolPapAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002736; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6657; labExpId=CThi10049; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549CytosolPapAlnRep3; type=bam; md5sum=9d7c580e8eea5c2b193070069f0b9e51; size=1.6G
wgEncodeRikenCageA549CytosolPapAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002736; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6657; labExpId=CThi10049; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549CytosolPapAlnRep3; type=bai; md5sum=46ed62f1350d8e9b3dd3a85f1f66d174; size=4.4M
wgEncodeRikenCageA549CytosolPapAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002736; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6688; labExpId=CThi10059; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549CytosolPapAlnRep4; type=bam; md5sum=cd4e783624d01398f8f1ac961770b60f; size=2.1G
wgEncodeRikenCageA549CytosolPapAlnRep4.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002736; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6688; labExpId=CThi10059; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549CytosolPapAlnRep4; type=bai; md5sum=9554cc029f1fb1aff7ecd492bbc627a1; size=4.4M
wgEncodeRikenCageA549CytosolPapMinusRawRep3.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002736; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6595; geoSampleAccession=GSM979632; labExpId=CThi10049; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549CytosolPapMinusRawRep3; type=bigWig; md5sum=7a79e9bc5f9edf7308728252d3bf6e11; size=26M
wgEncodeRikenCageA549CytosolPapMinusRawRep4.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002736; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6626; geoSampleAccession=GSM979632; labExpId=CThi10059; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549CytosolPapMinusRawRep4; type=bigWig; md5sum=d5408590ab9ea722a02563e50cae78c3; size=26M
wgEncodeRikenCageA549CytosolPapPlusRawRep3.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002736; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6595; geoSampleAccession=GSM979632; labExpId=CThi10049; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549CytosolPapPlusRawRep3; type=bigWig; md5sum=274bdd7e673e0c29c0981e389c661dcd; size=25M
wgEncodeRikenCageA549CytosolPapPlusRawRep4.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002736; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6626; geoSampleAccession=GSM979632; labExpId=CThi10059; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549CytosolPapPlusRawRep4; type=bigWig; md5sum=e14de5dee4e2a0c8c5ea6688dcaf9a4d; size=26M
wgEncodeRikenCageA549CytosolPapRawDataRep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002736; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6434; geoSampleAccession=GSM979632; labExpId=CThi10049; bioRep=087C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=9208e5ee1887657ac8d5a1416f3078a1; size=2.4G
wgEncodeRikenCageA549CytosolPapRawDataRep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002736; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6465; geoSampleAccession=GSM979632; labExpId=CThi10059; bioRep=088C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=64484988cb80ed64177b881392d1651a; size=3.2G
wgEncodeRikenCageA549CytosolPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=A549; localization=cytosol; rnaExtract=longPolyA; readType=1x50; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002736; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6723; geoSampleAccession=GSM979632; labExpId=CThi10049,CThi10059; bioRep=087C,088C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549CytosolPapTssHmm; type=bedRnaElements; md5sum=3ca940aaac31db4c9cd99b250b381984; size=3.8M
wgEncodeRikenCageA549NucleusPapAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002737; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6670; labExpId=CThi10106; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549NucleusPapAlnRep3; type=bam; md5sum=b2de372f2a14170431a7e2cf41c81b67; size=1.3G
wgEncodeRikenCageA549NucleusPapAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002737; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6670; labExpId=CThi10106; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549NucleusPapAlnRep3; type=bai; md5sum=67fc850ed90dcd91200ca434bc78d335; size=5.3M
wgEncodeRikenCageA549NucleusPapAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002737; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6689; labExpId=CThi10060; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549NucleusPapAlnRep4; type=bam; md5sum=84172dcb11974dae3de0b18ba2f78c70; size=2.2G
wgEncodeRikenCageA549NucleusPapAlnRep4.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002737; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6689; labExpId=CThi10060; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549NucleusPapAlnRep4; type=bai; md5sum=f69bb5158254ab8bfa56d4e17060676e; size=5.7M
wgEncodeRikenCageA549NucleusPapMinusRawRep3.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002737; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6608; geoSampleAccession=GSM979633; labExpId=CThi10106; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549NucleusPapMinusRawRep3; type=bigWig; md5sum=bdecc7faa264379e9d6f630a450a81bc; size=39M
wgEncodeRikenCageA549NucleusPapMinusRawRep4.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002737; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6627; geoSampleAccession=GSM979633; labExpId=CThi10060; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549NucleusPapMinusRawRep4; type=bigWig; md5sum=294fdaa0b30a6765b26962d5b8805480; size=69M
wgEncodeRikenCageA549NucleusPapPlusRawRep3.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002737; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6608; geoSampleAccession=GSM979633; labExpId=CThi10106; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549NucleusPapPlusRawRep3; type=bigWig; md5sum=3a6e65f30ef737261aca751e9da261cd; size=36M
wgEncodeRikenCageA549NucleusPapPlusRawRep4.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002737; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6627; geoSampleAccession=GSM979633; labExpId=CThi10060; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549NucleusPapPlusRawRep4; type=bigWig; md5sum=fa33f011425e6b9cb4db74dc538a2862; size=61M
wgEncodeRikenCageA549NucleusPapRawDataRep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002737; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6447; geoSampleAccession=GSM979633; labExpId=CThi10106; bioRep=087N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=1edf5fc648f0880d45007083366e5231; size=2.8G
wgEncodeRikenCageA549NucleusPapRawDataRep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002737; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6466; geoSampleAccession=GSM979633; labExpId=CThi10060; bioRep=088N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=f166417d95ae21529d5ecd95eecf618c; size=3.1G
wgEncodeRikenCageA549NucleusPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=A549; localization=nucleus; rnaExtract=longPolyA; readType=1x50; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002737; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6719; geoSampleAccession=GSM979633; labExpId=CThi10106,CThi10060; bioRep=087N,088N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageA549NucleusPapTssHmm; type=bedRnaElements; md5sum=a2e080e0849f65e0c15bf9553371b674; size=5.2M
wgEncodeRikenCageAg04450CellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3421; labExpId=K12; bioRep=017WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapAlnRep1; type=bam; md5sum=b4e3933531d3d4ba91680a2d19cbd497; size=530M
wgEncodeRikenCageAg04450CellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3421; labExpId=K12; bioRep=017WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapAlnRep1; type=bai; md5sum=fde66c3c3d6613bfb9f142b84fc6f0af; size=4.9M
wgEncodeRikenCageAg04450CellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3427; labExpId=K13; bioRep=018WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapAlnRep2; type=bam; md5sum=6137d7782b16a37eea79cf2580ffbce5; size=456M
wgEncodeRikenCageAg04450CellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3427; labExpId=K13; bioRep=018WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapAlnRep2; type=bai; md5sum=1b5991705c53711377cfc1aed5da1729; size=4.9M
wgEncodeRikenCageAg04450CellPapMinusSignalRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3479; geoSampleAccession=GSM849358; labExpId=K12; bioRep=017WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapMinusSignalRep1; type=bigWig; md5sum=f0a6517e60934654068bdc9e403abb1e; size=68M
wgEncodeRikenCageAg04450CellPapMinusSignalRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3480; geoSampleAccession=GSM849358; labExpId=K13; bioRep=018WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapMinusSignalRep2; type=bigWig; md5sum=a5a9e730880d6f3d05f9bcbf476ed337; size=62M
wgEncodeRikenCageAg04450CellPapPlusSignalRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3479; geoSampleAccession=GSM849358; labExpId=K12; bioRep=017WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapPlusSignalRep1; type=bigWig; md5sum=3655e816beecbbf279250e30a9691b66; size=70M
wgEncodeRikenCageAg04450CellPapPlusSignalRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3480; geoSampleAccession=GSM849358; labExpId=K13; bioRep=018WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapPlusSignalRep2; type=bigWig; md5sum=3582ebe3e115d576f987a5f5b61e04e4; size=64M
wgEncodeRikenCageAg04450CellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3421; geoSampleAccession=GSM849358; labExpId=K12; bioRep=017WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=eed6b59cf45655fa0ef9debfd8039f37; size=669M
wgEncodeRikenCageAg04450CellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=AG04450; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3427; geoSampleAccession=GSM849358; labExpId=K13; bioRep=018WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=eb2c60ac4cbe40d0c33933a7f296becc; size=563M
wgEncodeRikenCageAg04450CellPapTssGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=AG04450; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4520; geoSampleAccession=GSM849358; labExpId=K12,K13; bioRep=017WC,018WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=3016ad718c738c73a1b4464ebabfd966; size=3.1M
wgEncodeRikenCageAg04450CellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=AG04450; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001159; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849358; labExpId=K12,K13; bioRep=017WC,018WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageAg04450CellPapTssHmm; type=bedRnaElements; md5sum=ddc41e9f47db9fa7c2862b3ecdde70df; size=2.1M
wgEncodeRikenCageBjCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3428; labExpId=K18; bioRep=037WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapAlnRep1; type=bam; md5sum=a1132dad095044a9d2db183fdb09e3ff; size=418M
wgEncodeRikenCageBjCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3428; labExpId=K18; bioRep=037WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapAlnRep1; type=bai; md5sum=32292329cf614ce8fae8161ae5e4f385; size=4.8M
wgEncodeRikenCageBjCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3429; labExpId=K19; bioRep=038WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapAlnRep2; type=bam; md5sum=f4f7f44b1ac7044c8e9a886cccd5c391; size=421M
wgEncodeRikenCageBjCellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3429; labExpId=K19; bioRep=038WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapAlnRep2; type=bai; md5sum=4967ce59a18a9317d9aca85351ca78ca; size=5.0M
wgEncodeRikenCageBjCellPapMinusSignalRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3483; geoSampleAccession=GSM849328; labExpId=K18; bioRep=037WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapMinusSignalRep1; type=bigWig; md5sum=364067cd07ff38b75ad2e65b2d244d31; size=59M
wgEncodeRikenCageBjCellPapMinusSignalRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3484; geoSampleAccession=GSM849328; labExpId=K19; bioRep=038WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapMinusSignalRep2; type=bigWig; md5sum=af499c5f6e76233e78ab0c07f9676b51; size=63M
wgEncodeRikenCageBjCellPapPlusSignalRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3483; geoSampleAccession=GSM849328; labExpId=K18; bioRep=037WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapPlusSignalRep1; type=bigWig; md5sum=f8a208df77bad82c559a9c79454b27cc; size=61M
wgEncodeRikenCageBjCellPapPlusSignalRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-21; dateUnrestricted=2011-10-21; subId=3484; geoSampleAccession=GSM849328; labExpId=K19; bioRep=038WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapPlusSignalRep2; type=bigWig; md5sum=e8984fe76c3bf0b9808485aca37169dc; size=65M
wgEncodeRikenCageBjCellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3428; geoSampleAccession=GSM849328; labExpId=K18; bioRep=037WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=65d8e70e4d31f8c6fac7150db9dce317; size=516M
wgEncodeRikenCageBjCellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=BJ; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3429; geoSampleAccession=GSM849328; labExpId=K19; bioRep=038WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=b0c6e9f6d1bf16355c44fb7b68d379f2; size=500M
wgEncodeRikenCageBjCellPapTssGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=BJ; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4498; geoSampleAccession=GSM849328; labExpId=K18,K19; bioRep=037WC,038WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=92dc5d616b8527bfef4565fc4894fcb8; size=3.0M
wgEncodeRikenCageBjCellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=BJ; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001160; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849328; labExpId=K18,K19; bioRep=037WC,038WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageBjCellPapTssHmm; type=bedRnaElements; md5sum=5384dc8d939943aceddf0fd66effe38b; size=1.7M
wgEncodeRikenCageCd20CellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002738; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6687; labExpId=CThi10023; bioRep=041WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd20CellPapAlnRep1; type=bam; md5sum=387094d340b1e6ef83273828fab72a6a; size=1.4G
wgEncodeRikenCageCd20CellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002738; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6687; labExpId=CThi10023; bioRep=041WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd20CellPapAlnRep1; type=bai; md5sum=183b2c520f45473d819574114362531e; size=5.4M
wgEncodeRikenCageCd20CellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002738; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6710; labExpId=CThi10024; bioRep=042WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd20CellPapAlnRep2; type=bam; md5sum=b49964c65715c71f32c7329504721599; size=1.4G
wgEncodeRikenCageCd20CellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002738; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6710; labExpId=CThi10024; bioRep=042WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd20CellPapAlnRep2; type=bai; md5sum=4f2bf22b8f066c4cf14aca17fc418181; size=5.3M
wgEncodeRikenCageCd20CellPapMinusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002738; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6625; geoSampleAccession=GSM979634; labExpId=CThi10023; bioRep=041WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd20CellPapMinusRawRep1; type=bigWig; md5sum=2053bfd291ad4fec1ffaea1a5517828b; size=25M
wgEncodeRikenCageCd20CellPapMinusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002738; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6647; geoSampleAccession=GSM979634; labExpId=CThi10024; bioRep=042WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd20CellPapMinusRawRep2; type=bigWig; md5sum=0ea0e0130caaa4463c8df320d520d47e; size=24M
wgEncodeRikenCageCd20CellPapPlusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002738; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6625; geoSampleAccession=GSM979634; labExpId=CThi10023; bioRep=041WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd20CellPapPlusRawRep1; type=bigWig; md5sum=8b23418535fdb54eef063a684eb7380e; size=23M
wgEncodeRikenCageCd20CellPapPlusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002738; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6647; geoSampleAccession=GSM979634; labExpId=CThi10024; bioRep=042WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd20CellPapPlusRawRep2; type=bigWig; md5sum=290e3fee55b7c60fd32b705c1a012255; size=23M
wgEncodeRikenCageCd20CellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=RO01794; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002738; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6463; geoSampleAccession=GSM979634; labExpId=CThi10023; bioRep=041WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=390ad3d5d7ef514709e5eaf772cb1fbd; size=2.0G
wgEncodeRikenCageCd20CellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002738; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6487; geoSampleAccession=GSM979634; labExpId=CThi10024; bioRep=042WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=62de2bb1c831e4e12e21d73ce6edeaa0; size=2.0G
wgEncodeRikenCageCd20CellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=CD20+; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=RO01794,RO01778; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002738; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6744; geoSampleAccession=GSM979634; labExpId=CThi10023,CThi10024; bioRep=041WC,042WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd20CellPapTssHmm; type=bedRnaElements; md5sum=c69036e9a1bf0eb39d0b73687fc31ec1; size=2.5M
wgEncodeRikenCageCd34mobilizedCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=CD34+_Mobilized; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002739; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6679; labExpId=CThi10058; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd34mobilizedCellPapAlnRep1; type=bam; md5sum=6473babe341854a82cd55454238b553c; size=1.9G
wgEncodeRikenCageCd34mobilizedCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=CD34+_Mobilized; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002739; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6679; labExpId=CThi10058; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd34mobilizedCellPapAlnRep1; type=bai; md5sum=52cf9687562f4ff6c690286732041c4c; size=5.6M
wgEncodeRikenCageCd34mobilizedCellPapMinusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=CD34+_Mobilized; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002739; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6618; geoSampleAccession=GSM979635; labExpId=CThi10058; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd34mobilizedCellPapMinusRawRep1; type=bigWig; md5sum=d9ad2b6901d7044ac738e80d537c8cad; size=35M
wgEncodeRikenCageCd34mobilizedCellPapPlusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=CD34+_Mobilized; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002739; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6618; geoSampleAccession=GSM979635; labExpId=CThi10058; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd34mobilizedCellPapPlusRawRep1; type=bigWig; md5sum=b2ccda5c3c3645069e2cb640a85c4e98; size=33M
wgEncodeRikenCageCd34mobilizedCellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=CD34+_Mobilized; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002739; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6457; geoSampleAccession=GSM979635; labExpId=CThi10058; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=4c2bcef04c267c5a53d08d79cf5fa702; size=3.0G
wgEncodeRikenCageCd34mobilizedCellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=CD34+_Mobilized; localization=cell; rnaExtract=longPolyA; readType=1x50; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002739; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6725; geoSampleAccession=GSM979635; labExpId=CThi10058; bioRep=043WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageCd34mobilizedCellPapTssHmm; type=bedRnaElements; md5sum=ab8da53f0160caed5bf387c3f1f376d0; size=1.9M
wgEncodeRikenCageGm12878CellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3946; labExpId=J72; bioRep=003WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapAlnRep1; type=bam; md5sum=ea9f4c22893c4742e10c7a650eb708b1; size=598M
wgEncodeRikenCageGm12878CellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3946; labExpId=J72; bioRep=003WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapAlnRep1; type=bai; md5sum=2f6dcd025e5cd4cf2f2c27588907ea4d; size=5.1M
wgEncodeRikenCageGm12878CellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3951; labExpId=J73; bioRep=004WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapAlnRep2; type=bam; md5sum=1f7c9c2db92bf0c340342d3b79c2bb56; size=651M
wgEncodeRikenCageGm12878CellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3951; labExpId=J73; bioRep=004WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapAlnRep2; type=bai; md5sum=31c490fd5faccc8052d5c164607be4ab; size=5.1M
wgEncodeRikenCageGm12878CellPapMinusSignalRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3946; geoSampleAccession=GSM849368; labExpId=J72; bioRep=003WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapMinusSignalRep1; type=bigWig; md5sum=8cd60821188d81a0fff923b913a2f156; size=13M
wgEncodeRikenCageGm12878CellPapMinusSignalRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3951; geoSampleAccession=GSM849368; labExpId=J73; bioRep=004WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapMinusSignalRep2; type=bigWig; md5sum=4f1cbefb544bc5d8b00ebc089cf9178f; size=17M
wgEncodeRikenCageGm12878CellPapPlusSignalRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3946; geoSampleAccession=GSM849368; labExpId=J72; bioRep=003WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapPlusSignalRep1; type=bigWig; md5sum=6b3c771491b80a0c2a79d908a5e1f60b; size=15M
wgEncodeRikenCageGm12878CellPapPlusSignalRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3951; geoSampleAccession=GSM849368; labExpId=J73; bioRep=004WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapPlusSignalRep2; type=bigWig; md5sum=2c5e364b2affd07ca95a344f16ce8f26; size=15M
wgEncodeRikenCageGm12878CellPapRawDataRep1.fastq.tgz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=2389; geoSampleAccession=GSM849368; labExpId=J72; bioRep=003WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=38489b20550f89a117ba9652efd95373; size=731M
wgEncodeRikenCageGm12878CellPapRawDataRep2.fastq.tgz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=GM12878; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=2394; geoSampleAccession=GSM849368; labExpId=J73; bioRep=004WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=935bf7c7b2a9d9225739aab7ea69a65d; size=792M
wgEncodeRikenCageGm12878CellPapTssGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=GM12878; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4531; geoSampleAccession=GSM849368; labExpId=J72,J73; bioRep=003WC,004WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=177c08c98076452c958bef6b6e1ad7a2; size=3.1M
wgEncodeRikenCageGm12878CellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=GM12878; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001680; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849368; labExpId=J72,J73; bioRep=003WC,004WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CellPapTssHmm; type=bedRnaElements; md5sum=5f6e685ac94e68d1f8696df5f695fd1a; size=5.7M
wgEncodeRikenCageGm12878CytosolLongnonpolyaAln.bam	objStatus=renamed; project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; replicate=0; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2009-03-09; dateResubmitted=2010-06-21; dateUnrestricted=2009-12-09; subId=1797; bioRep=Generation 0; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageGm12878CytosolLongnonpolyaAln; type=bam; md5sum=ce61eeed6ffb7b9ea07c9e912a2aa65d; size=571M
wgEncodeRikenCageGm12878CytosolLongnonpolyaAln.bam.bai	objStatus=renamed; project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; replicate=0; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2009-03-09; dateResubmitted=2010-06-21; dateUnrestricted=2009-12-09; subId=1797; bioRep=Generation 0; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageGm12878CytosolLongnonpolyaAln; type=bai; md5sum=057098a2247ac79249d48cc55e6e9ee5; size=5.5M
wgEncodeRikenCageGm12878CytosolLongnonpolyaMinusClusters.bigWig	objStatus=renamed; project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; replicate=0; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2009-03-09; dateResubmitted=2010-06-21; dateUnrestricted=2009-12-09; subId=1797; bioRep=Generation 0; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageGm12878CytosolLongnonpolyaMinusClusters; type=bigWig; md5sum=16f881e10265380521e309683375cf3d; size=12M
wgEncodeRikenCageGm12878CytosolLongnonpolyaPlusClusters.bigWig	objStatus=renamed; project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; replicate=0; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2009-03-09; dateResubmitted=2010-06-21; dateUnrestricted=2009-12-09; subId=1797; bioRep=Generation 0; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageGm12878CytosolLongnonpolyaPlusClusters; type=bigWig; md5sum=5fec08d3900bf7c1c20a9b35689f5663; size=12M
wgEncodeRikenCageGm12878CytosolLongnonpolyaRawData.fastq.gz	objStatus=revoked - bad data from old release; project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; replicate=0; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2009-03-09; dateUnrestricted=2009-12-09; subId=2433; geoSampleAccession=GSM849329; bioRep=Generation 0; type=fastq; md5sum=a55c37bad666e528ba5cdd59e5479f09; size=562M
wgEncodeRikenCageGm12878CytosolPamAln.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2009-03-09; dateResubmitted=2010-06-21; dateUnrestricted=2009-12-09; subId=1797; labExpId=I27; bioRep=gen0104C; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageGm12878CytosolPamAln; type=bam; md5sum=ce61eeed6ffb7b9ea07c9e912a2aa65d; size=571M
wgEncodeRikenCageGm12878CytosolPamAln.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2009-03-09; dateResubmitted=2010-06-21; dateUnrestricted=2009-12-09; subId=1797; labExpId=I27; bioRep=gen0104C; labVersion=Delve version 0.9; tableName=wgEncodeRikenCageGm12878CytosolPamAln; type=bai; md5sum=057098a2247ac79249d48cc55e6e9ee5; size=5.5M
wgEncodeRikenCageGm12878CytosolPamMinusSignal.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2009-03-09; dateResubmitted=2010-06-21; dateUnrestricted=2009-12-09; subId=1797; geoSampleAccession=GSM849329; labExpId=I27; bioRep=gen0104C; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageGm12878CytosolPamMinusSignal; type=bigWig; md5sum=16f881e10265380521e309683375cf3d; size=12M
wgEncodeRikenCageGm12878CytosolPamPlusSignal.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE June 2010 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2009-03-09; dateResubmitted=2010-06-21; dateUnrestricted=2009-12-09; subId=1797; geoSampleAccession=GSM849329; labExpId=I27; bioRep=gen0104C; labVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageGm12878CytosolPamPlusSignal; type=bigWig; md5sum=5fec08d3900bf7c1c20a9b35689f5663; size=12M
wgEncodeRikenCageGm12878CytosolPamRawData.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2009-03-09; dateUnrestricted=2009-12-09; subId=2433; geoSampleAccession=GSM849329; labExpId=I27; bioRep=gen0104C; type=fastq; md5sum=a55c37bad666e528ba5cdd59e5479f09; size=562M
wgEncodeRikenCageGm12878CytosolPamTssGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4526; geoSampleAccession=GSM849329; labExpId=I27; bioRep=gen0104C; type=gtf; md5sum=4325ec242a56ce4d14b305a1ef2d7327; size=2.6M
wgEncodeRikenCageGm12878CytosolPamTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2011-11-04; dateUnrestricted=2012-08-04; subId=5075; geoSampleAccession=GSM849329; labExpId=I27; bioRep=gen0104C; labVersion=IDR; type=bedRnaElements; md5sum=329b5534c170df31bb68a5ec85fa29c7; size=3.1M
wgEncodeRikenCageGm12878CytosolPamTssHmmV2.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=GM12878; localization=cytosol; rnaExtract=longNonPolyA; submittedDataVersion=V2 - Repacing . with -1 for missing data; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000338; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5609; geoSampleAccession=GSM849329; labExpId=I27; bioRep=gen0104C; tableName=wgEncodeRikenCageGm12878CytosolPamTssHmmV2; type=bedRnaElements; md5sum=71a1a2c77cc44a6fe8096bcecd7c96e9; size=3.1M
wgEncodeRikenCageGm12878CytosolPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001679; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3950; labExpId=J84; bioRep=003C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CytosolPapAlnRep1; type=bam; md5sum=8cdec463b84758a0f9413ed98415aa0c; size=594M
wgEncodeRikenCageGm12878CytosolPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001679; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3950; labExpId=J84; bioRep=003C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CytosolPapAlnRep1; type=bai; md5sum=8d586a3389dd7d10466aa277903a3116; size=4.8M
wgEncodeRikenCageGm12878CytosolPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001679; dateSubmitted=2011-04-28; dateUnrestricted=2012-01-28; subId=3947; labExpId=J85; bioRep=004C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CytosolPapAlnRep2; type=bam; md5sum=e8873a432725fff6acf71991c178b875; size=589M
wgEncodeRikenCageGm12878CytosolPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001679; dateSubmitted=2011-04-28; dateUnrestricted=2012-01-28; subId=3947; labExpId=J85; bioRep=004C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CytosolPapAlnRep2; type=bai; md5sum=3604a10a48d7d54a0b06cd560416a3b6; size=4.5M
wgEncodeRikenCageGm12878CytosolPapMinusSignalRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=GM12878; localization=cytosol; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001679; dateSubmitted=2011-04-29; dateUnrestricted=2012-01-29; subId=3950; geoSampleAccession=GSM849349; labExpId=J84; bioRep=003C; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageGm12878CytosolPapMinusSignalRep1; type=bigWig; md5sum=33171018a1b5f7ca9469e87db1f2d052; size=12M
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wgEncodeRikenCageH1hescCellPamMinusSignal.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000341; dateSubmitted=2010-01-13; dateResubmitted=2010-09-22; dateUnrestricted=2010-10-13; subId=1799; geoSampleAccession=GSM849355; labExpId=I67; bioRep=gen0113WC; softwareVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageH1hescCellPamMinusSignal; type=bigWig; md5sum=94db6594e3652cd5d769fbcb24e7ec27; size=6.5M
wgEncodeRikenCageH1hescCellPamPlusSignal.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000341; dateSubmitted=2010-01-13; dateResubmitted=2010-09-22; dateUnrestricted=2010-10-13; subId=1799; geoSampleAccession=GSM849355; labExpId=I67; bioRep=gen0113WC; softwareVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageH1hescCellPamPlusSignal; type=bigWig; md5sum=7ec869e6e5dc08e4ff210d8f10a53ee6; size=9.2M
wgEncodeRikenCageH1hescCellPamRawData.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000341; dateSubmitted=2010-01-13; dateUnrestricted=2010-10-13; subId=2433; geoSampleAccession=GSM849355; labExpId=I67; bioRep=gen0113WC; type=fastq; md5sum=4d3aa53e55b2bc0038a5b73991a1a86a; size=933M
wgEncodeRikenCageH1hescCellPamTssGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=H1-hESC; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH000341; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4530; geoSampleAccession=GSM849355; labExpId=I67; bioRep=gen0113WC; type=gtf; md5sum=36f1f066b9e014ae349ccf85c97072c8; size=2.8M
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wgEncodeRikenCageHaoafCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HAoAF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6111301.9; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002740; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6668; labExpId=CThi10100CTT; bioRep=055WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHaoafCellPapAlnRep1; type=bam; md5sum=14cac2e94363cd4186e767507c947ced; size=737M
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wgEncodeRikenCageHaoecCellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HAoEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=8061102.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002741; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6454; geoSampleAccession=GSM979636; labExpId=CThi10105CTT; bioRep=058WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=526d791f2880746b0e1f63dd522d1370; size=541M
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wgEncodeRikenCageHchCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HCH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002742; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6707; labExpId=CThi10104CTT; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHchCellPapAlnRep1; type=bam; md5sum=dbb1648b53999f625db05b909894452a; size=107M
wgEncodeRikenCageHchCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HCH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002742; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6707; labExpId=CThi10104CTT; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHchCellPapAlnRep1; type=bai; md5sum=c818925f26354d2fbe51294ddfcbae64; size=3.1M
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wgEncodeRikenCageHchCellPapMinusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HCH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0011308.2P; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002742; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6645; geoSampleAccession=GSM979639; labExpId=CThi10104CTT; bioRep=059WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHchCellPapMinusRawRep1; type=bigWig; md5sum=d163e9d412b3229303633cd34d360e45; size=4.3M
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wgEncodeRikenCageHelas3CellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HeLa-S3; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001146; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2363; labExpId=J80; bioRep=011WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHelas3CellPapAlnRep1; type=bam; md5sum=45d63896684904984986a8eee2b0801e; size=634M
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wgEncodeRikenCageHfdpcCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HFDPC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002743; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6704; labExpId=CThi10103ACA; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHfdpcCellPapAlnRep1; type=bam; md5sum=1baf70bea2b671d77dc705dd3374ec20; size=231M
wgEncodeRikenCageHfdpcCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HFDPC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002743; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6704; labExpId=CThi10103ACA; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHfdpcCellPapAlnRep1; type=bai; md5sum=41bbe92efeaa4fd893e40cdef6489782; size=2.7M
wgEncodeRikenCageHfdpcCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HFDPC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002743; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6691; labExpId=CThi10100GAT; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHfdpcCellPapAlnRep2; type=bam; md5sum=01a4934717b5e198e1978aced58db375; size=39M
wgEncodeRikenCageHfdpcCellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HFDPC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002743; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6691; labExpId=CThi10100GAT; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHfdpcCellPapAlnRep2; type=bai; md5sum=1dc602e2e80ac268b0168871332afcf0; size=2.0M
wgEncodeRikenCageHfdpcCellPapMinusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HFDPC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002743; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6641; geoSampleAccession=GSM979638; labExpId=CThi10103ACA; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHfdpcCellPapMinusRawRep1; type=bigWig; md5sum=c689a9e97c8a89b8325f2821fb05f6e8; size=4.8M
wgEncodeRikenCageHfdpcCellPapMinusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HFDPC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002743; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6629; geoSampleAccession=GSM979638; labExpId=CThi10100GAT; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHfdpcCellPapMinusRawRep2; type=bigWig; md5sum=3f75e07bc611cddbae035fc5f1236d63; size=858K
wgEncodeRikenCageHfdpcCellPapPlusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HFDPC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002743; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6641; geoSampleAccession=GSM979638; labExpId=CThi10103ACA; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHfdpcCellPapPlusRawRep1; type=bigWig; md5sum=8a883c171601c88ba031a385ad956b85; size=4.7M
wgEncodeRikenCageHfdpcCellPapPlusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HFDPC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002743; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6629; geoSampleAccession=GSM979638; labExpId=CThi10100GAT; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHfdpcCellPapPlusRawRep2; type=bigWig; md5sum=8d9adbd1a0d366831eaf5a2ee4fa2bb1; size=860K
wgEncodeRikenCageHfdpcCellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HFDPC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0102703.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002743; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6480; geoSampleAccession=GSM979638; labExpId=CThi10103ACA; bioRep=061WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=4c4d15717956261850033f48573e49e5; size=407M
wgEncodeRikenCageHfdpcCellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HFDPC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002743; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6468; geoSampleAccession=GSM979638; labExpId=CThi10100GAT; bioRep=062WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=2ecea8120606ae016b06c7e446b5e111; size=97M
wgEncodeRikenCageHfdpcCellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HFDPC; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=0102703.3,0100503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002743; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6712; geoSampleAccession=GSM979638; labExpId=CThi10103ACA,CThi10100GAT; bioRep=061WC,062WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHfdpcCellPapTssHmm; type=bedRnaElements; md5sum=428dec786b51127afa8a70d753228f8c; size=338K
wgEncodeRikenCageHmepcCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HMEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002744; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6674; labExpId=CThi10105GAT; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmepcCellPapAlnRep1; type=bam; md5sum=2be4d9924e4951db44641dc2316b1c2a; size=526M
wgEncodeRikenCageHmepcCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HMEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002744; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6674; labExpId=CThi10105GAT; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmepcCellPapAlnRep1; type=bai; md5sum=0a1faac04b1e89f283228181464cdb42; size=3.9M
wgEncodeRikenCageHmepcCellPapMinusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HMEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002744; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6612; geoSampleAccession=GSM979641; labExpId=CThi10105GAT; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmepcCellPapMinusRawRep1; type=bigWig; md5sum=b68db89e4c98872955073d47d31b0386; size=12M
wgEncodeRikenCageHmepcCellPapPlusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HMEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002744; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6612; geoSampleAccession=GSM979641; labExpId=CThi10105GAT; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmepcCellPapPlusRawRep1; type=bigWig; md5sum=3e389290cf9e48d636cf6b5891646515; size=11M
wgEncodeRikenCageHmepcCellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HMEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002744; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6452; geoSampleAccession=GSM979641; labExpId=CThi10105GAT; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=8f51e124d754c1bdccb512e66aebc3d4; size=896M
wgEncodeRikenCageHmepcCellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HMEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=6022801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002744; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6722; geoSampleAccession=GSM979641; labExpId=CThi10105GAT; bioRep=063WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmepcCellPapTssHmm; type=bedRnaElements; md5sum=2086ceaa259db00df99625d501e85f06; size=1.1M
wgEncodeRikenCageHmscatCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-AT; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002765; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6706; labExpId=CThi10105ACA; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscatCellPapAlnRep1; type=bam; md5sum=980046cc51b708327214eb2a634eb0e8; size=339M
wgEncodeRikenCageHmscatCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-AT; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002765; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6706; labExpId=CThi10105ACA; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscatCellPapAlnRep1; type=bai; md5sum=3a9804cc91fe78c3ee04812d65138d93; size=3.3M
wgEncodeRikenCageHmscatCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-AT; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002765; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6664; labExpId=CThi10104GAT; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscatCellPapAlnRep2; type=bam; md5sum=e2dc0ad2bea4d51a66d104e1067edf98; size=530M
wgEncodeRikenCageHmscatCellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-AT; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002765; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6664; labExpId=CThi10104GAT; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscatCellPapAlnRep2; type=bai; md5sum=bea4c76fc37b7a93cf55f5ecbc43bc5a; size=3.7M
wgEncodeRikenCageHmscatCellPapMinusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=hMSC-AT; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002765; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6644; geoSampleAccession=GSM979652; labExpId=CThi10105ACA; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscatCellPapMinusRawRep1; type=bigWig; md5sum=b57164643803da6826596760dc823507; size=7.8M
wgEncodeRikenCageHmscatCellPapMinusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=hMSC-AT; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002765; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6602; geoSampleAccession=GSM979652; labExpId=CThi10104GAT; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscatCellPapMinusRawRep2; type=bigWig; md5sum=5f941c27d13a5e8fac1d9df4750e16f7; size=10M
wgEncodeRikenCageHmscatCellPapPlusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=hMSC-AT; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002765; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6644; geoSampleAccession=GSM979652; labExpId=CThi10105ACA; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscatCellPapPlusRawRep1; type=bigWig; md5sum=9467c8e83ff1f795b26a311d45484d04; size=7.4M
wgEncodeRikenCageHmscatCellPapPlusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=hMSC-AT; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002765; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6602; geoSampleAccession=GSM979652; labExpId=CThi10104GAT; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscatCellPapPlusRawRep2; type=bigWig; md5sum=86d9b9ceeadaa1b88cca2d32fa8e18ad; size=9.5M
wgEncodeRikenCageHmscatCellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=hMSC-AT; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0102604.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002765; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6483; geoSampleAccession=GSM979652; labExpId=CThi10105ACA; bioRep=065WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=601909b45f6cd13f0d746e0699d1f80f; size=587M
wgEncodeRikenCageHmscatCellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=hMSC-AT; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002765; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6442; geoSampleAccession=GSM979652; labExpId=CThi10104GAT; bioRep=066WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=bb080a462e532f415e905fd1efb33265; size=930M
wgEncodeRikenCageHmscatCellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=hMSC-AT; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=0102604.12,9061601.12; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002765; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6714; geoSampleAccession=GSM979652; labExpId=CThi10105ACA,CThi10104GAT; bioRep=065WC,066WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscatCellPapTssHmm; type=bedRnaElements; md5sum=19c4ad122a079e2041c4a2989085c7ff; size=1.3M
wgEncodeRikenCageHmscbmCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-BM; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002766; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6686; labExpId=CThi10103ATC; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscbmCellPapAlnRep1; type=bam; md5sum=8a0443fb6ab8a7ea9853179771ff8333; size=318M
wgEncodeRikenCageHmscbmCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-BM; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002766; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6686; labExpId=CThi10103ATC; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscbmCellPapAlnRep1; type=bai; md5sum=5f8000827e6b44903ed1c6205732394b; size=3.0M
wgEncodeRikenCageHmscbmCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-BM; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002766; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6684; labExpId=CThi10100ACA; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscbmCellPapAlnRep2; type=bam; md5sum=579776f5ec2b0142872a30eb1e53e419; size=196M
wgEncodeRikenCageHmscbmCellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-BM; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002766; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6684; labExpId=CThi10100ACA; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscbmCellPapAlnRep2; type=bai; md5sum=ce8ebefbe1aa690030a712c465732f08; size=2.6M
wgEncodeRikenCageHmscbmCellPapMinusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=hMSC-BM; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002766; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6624; geoSampleAccession=GSM979651; labExpId=CThi10103ATC; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscbmCellPapMinusRawRep1; type=bigWig; md5sum=085fca3bf647fbe0a9c507acc06ff188; size=5.9M
wgEncodeRikenCageHmscbmCellPapMinusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=hMSC-BM; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002766; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6622; geoSampleAccession=GSM979651; labExpId=CThi10100ACA; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscbmCellPapMinusRawRep2; type=bigWig; md5sum=a9bfecbd50178e599295da0d7290e542; size=3.8M
wgEncodeRikenCageHmscbmCellPapPlusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=hMSC-BM; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002766; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6624; geoSampleAccession=GSM979651; labExpId=CThi10103ATC; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscbmCellPapPlusRawRep1; type=bigWig; md5sum=120ee4dc72b1d20df23963c185cc8c14; size=5.8M
wgEncodeRikenCageHmscbmCellPapPlusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=hMSC-BM; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002766; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6622; geoSampleAccession=GSM979651; labExpId=CThi10100ACA; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscbmCellPapPlusRawRep2; type=bigWig; md5sum=27f7549d8ae1efe8549733a60c7a571b; size=3.8M
wgEncodeRikenCageHmscbmCellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=hMSC-BM; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0051105.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002766; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6464; geoSampleAccession=GSM979651; labExpId=CThi10103ATC; bioRep=067WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=0877bff47c35f382b23f3902679b2f4c; size=546M
wgEncodeRikenCageHmscbmCellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=hMSC-BM; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002766; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6462; geoSampleAccession=GSM979651; labExpId=CThi10100ACA; bioRep=068WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=1f46d6cf80a224507c450105aa42c236; size=329M
wgEncodeRikenCageHmscbmCellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=hMSC-BM; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=0051105.11,0050602.11; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002766; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6711; geoSampleAccession=GSM979651; labExpId=CThi10103ATC,CThi10100ACA; bioRep=067WC,068WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscbmCellPapTssHmm; type=bedRnaElements; md5sum=7cfa0a9e8866bd43ebb02ce293b54102; size=698K
wgEncodeRikenCageHmscucCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-UC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002767; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6695; labExpId=CThi10101CTT; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscucCellPapAlnRep1; type=bam; md5sum=be3b67391fdf14fbdb3135d2047ce434; size=1.2G
wgEncodeRikenCageHmscucCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-UC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002767; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6695; labExpId=CThi10101CTT; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscucCellPapAlnRep1; type=bai; md5sum=4fc482ef75f394323cf9b44668f14a07; size=4.3M
wgEncodeRikenCageHmscucCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-UC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002767; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6700; labExpId=CThi10100ATC; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscucCellPapAlnRep2; type=bam; md5sum=0a69c061b50005b169d74c009cf6086a; size=1.6G
wgEncodeRikenCageHmscucCellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=hMSC-UC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002767; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6700; labExpId=CThi10100ATC; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscucCellPapAlnRep2; type=bai; md5sum=76b9a4f767539d792e70c83a7bd97834; size=4.3M
wgEncodeRikenCageHmscucCellPapMinusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=hMSC-UC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002767; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6633; geoSampleAccession=GSM979650; labExpId=CThi10101CTT; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscucCellPapMinusRawRep1; type=bigWig; md5sum=c1e598de2fbfb2c96c1ab53697bfc74f; size=17M
wgEncodeRikenCageHmscucCellPapMinusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=hMSC-UC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002767; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6639; geoSampleAccession=GSM979650; labExpId=CThi10100ATC; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscucCellPapMinusRawRep2; type=bigWig; md5sum=b521039b2ecca4881401c3022b668c9d; size=16M
wgEncodeRikenCageHmscucCellPapPlusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=hMSC-UC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002767; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6633; geoSampleAccession=GSM979650; labExpId=CThi10101CTT; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscucCellPapPlusRawRep1; type=bigWig; md5sum=de5fa530b3f3a11b421d72aeb6f129f7; size=17M
wgEncodeRikenCageHmscucCellPapPlusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=hMSC-UC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002767; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6639; geoSampleAccession=GSM979650; labExpId=CThi10100ATC; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscucCellPapPlusRawRep2; type=bigWig; md5sum=0353c56ce570c4741371db0003d737fb; size=19M
wgEncodeRikenCageHmscucCellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=hMSC-UC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0052501.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002767; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6472; geoSampleAccession=GSM979650; labExpId=CThi10101CTT; bioRep=069WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=b13b5f26bb1893d3cf0a2c9083379922; size=1.8G
wgEncodeRikenCageHmscucCellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=hMSC-UC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002767; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6478; geoSampleAccession=GSM979650; labExpId=CThi10100ATC; bioRep=070WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=fde4f213ba6f3aee964e7167acc70a32; size=2.5G
wgEncodeRikenCageHmscucCellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=hMSC-UC; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=0052501.7,0081101.7; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002767; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6739; geoSampleAccession=GSM979650; labExpId=CThi10101CTT,CThi10100ATC; bioRep=069WC,070WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHmscucCellPapTssHmm; type=bedRnaElements; md5sum=acfb53556a373b84f867e7f1ee2e805d; size=2.0M
wgEncodeRikenCageHobCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HOB; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002745; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6658; labExpId=CThi10036; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHobCellPapAlnRep1; type=bam; md5sum=85bb887a0af49de0eb64695681d2c7b3; size=1.7G
wgEncodeRikenCageHobCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HOB; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002745; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6658; labExpId=CThi10036; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHobCellPapAlnRep1; type=bai; md5sum=3803eaea75416c948dc58ffa93bbeaf4; size=4.1M
wgEncodeRikenCageHobCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HOB; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002745; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6698; labExpId=CThi10037; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHobCellPapAlnRep2; type=bam; md5sum=7e0523b3f331936f5a6c02acae139f88; size=1.7G
wgEncodeRikenCageHobCellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HOB; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002745; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6698; labExpId=CThi10037; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHobCellPapAlnRep2; type=bai; md5sum=e2f378c17e9abd3e7007cac4cee19d06; size=4.1M
wgEncodeRikenCageHobCellPapMinusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HOB; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002745; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6596; geoSampleAccession=GSM979640; labExpId=CThi10036; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHobCellPapMinusRawRep1; type=bigWig; md5sum=f93551aae06acec990e950b96b5bc5cd; size=15M
wgEncodeRikenCageHobCellPapMinusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HOB; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002745; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6636; geoSampleAccession=GSM979640; labExpId=CThi10037; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHobCellPapMinusRawRep2; type=bigWig; md5sum=73c9b58a82de1c4b59dc07cb605896cd; size=14M
wgEncodeRikenCageHobCellPapPlusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HOB; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002745; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6596; geoSampleAccession=GSM979640; labExpId=CThi10036; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHobCellPapPlusRawRep1; type=bigWig; md5sum=10e14a33d547389bef49228efb06b431; size=15M
wgEncodeRikenCageHobCellPapPlusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HOB; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002745; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6636; geoSampleAccession=GSM979640; labExpId=CThi10037; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHobCellPapPlusRawRep2; type=bigWig; md5sum=294e2e3c2b8a3c030fd2ef6184853f99; size=14M
wgEncodeRikenCageHobCellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HOB; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0091301; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002745; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6436; geoSampleAccession=GSM979640; labExpId=CThi10036; bioRep=053WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=b2b468f53cfffef591e5373590e2baf2; size=2.9G
wgEncodeRikenCageHobCellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HOB; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002745; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6475; geoSampleAccession=GSM979640; labExpId=CThi10037; bioRep=054WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=f0eb0e43c546394631334cfcab12379d; size=2.7G
wgEncodeRikenCageHobCellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HOB; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=0091301,0090202.1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002745; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6716; geoSampleAccession=GSM979640; labExpId=CThi10036,CThi10037; bioRep=053WC,054WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHobCellPapTssHmm; type=bedRnaElements; md5sum=66d6a28d7dd699f81e2b2c9e1718e5da; size=1.6M
wgEncodeRikenCageHpcplCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HPC-PL; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002746; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6685; labExpId=CThi10057; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpcplCellPapAlnRep1; type=bam; md5sum=530ec925fef20862f9fe9769d0b1c21a; size=1.8G
wgEncodeRikenCageHpcplCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HPC-PL; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002746; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6685; labExpId=CThi10057; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpcplCellPapAlnRep1; type=bai; md5sum=e0e8a1ea4205ebc19b466108c33ad71b; size=4.2M
wgEncodeRikenCageHpcplCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HPC-PL; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002746; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6690; labExpId=CThi10105ATC; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpcplCellPapAlnRep2; type=bam; md5sum=6d73bb583fe274c89831579bc2aca3b0; size=1.1G
wgEncodeRikenCageHpcplCellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HPC-PL; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002746; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6690; labExpId=CThi10105ATC; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpcplCellPapAlnRep2; type=bai; md5sum=d38c0a825824891a273bb7bc356a5b6b; size=4.1M
wgEncodeRikenCageHpcplCellPapMinusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HPC-PL; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002746; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6623; geoSampleAccession=GSM979643; labExpId=CThi10057; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpcplCellPapMinusRawRep1; type=bigWig; md5sum=1576d30e4978fb8846234c9b02565c1b; size=15M
wgEncodeRikenCageHpcplCellPapMinusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HPC-PL; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002746; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6628; geoSampleAccession=GSM979643; labExpId=CThi10105ATC; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpcplCellPapMinusRawRep2; type=bigWig; md5sum=53e554a4290d7bda9306e8c131d28141; size=14M
wgEncodeRikenCageHpcplCellPapPlusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HPC-PL; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002746; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6623; geoSampleAccession=GSM979643; labExpId=CThi10057; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpcplCellPapPlusRawRep1; type=bigWig; md5sum=1c8c3f8e8680592033faf1530a4e777a; size=18M
wgEncodeRikenCageHpcplCellPapPlusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HPC-PL; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002746; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6628; geoSampleAccession=GSM979643; labExpId=CThi10105ATC; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpcplCellPapPlusRawRep2; type=bigWig; md5sum=4ee11ac3731de8868264605ed67182ef; size=13M
wgEncodeRikenCageHpcplCellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HPC-PL; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0101504.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002746; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6461; geoSampleAccession=GSM979643; labExpId=CThi10057; bioRep=071WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=2fc004fabb88bdfb50bccf7b433e7044; size=3.3G
wgEncodeRikenCageHpcplCellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HPC-PL; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002746; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6467; geoSampleAccession=GSM979643; labExpId=CThi10105ATC; bioRep=072WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=a8416111bb2c818b05857daff8acc9e2; size=1.8G
wgEncodeRikenCageHpcplCellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HPC-PL; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=0101504.13,0032601.13; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002746; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6742; geoSampleAccession=GSM979643; labExpId=CThi10057,CThi10105ATC; bioRep=071WC,072WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpcplCellPapTssHmm; type=bedRnaElements; md5sum=9391d21a6b8f779958ce2dbbc384d076; size=1.8M
wgEncodeRikenCageHpiepcCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HPIEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002747; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6672; labExpId=CThi10104ATC; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpiepcCellPapAlnRep1; type=bam; md5sum=9f9cb217ccef09079dba2460eb54008c; size=282M
wgEncodeRikenCageHpiepcCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HPIEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002747; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6672; labExpId=CThi10104ATC; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpiepcCellPapAlnRep1; type=bai; md5sum=5f685ef9b1d100d930cfc334297fac78; size=3.1M
wgEncodeRikenCageHpiepcCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HPIEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002747; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6682; labExpId=CThi10101GAT; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpiepcCellPapAlnRep2; type=bam; md5sum=f6e4abe3aca33a1e88becf0ce25cf11b; size=55M
wgEncodeRikenCageHpiepcCellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HPIEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002747; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6682; labExpId=CThi10101GAT; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpiepcCellPapAlnRep2; type=bai; md5sum=af44e35541853be7112327460716a6d0; size=2.5M
wgEncodeRikenCageHpiepcCellPapMinusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HPIEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002747; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6610; geoSampleAccession=GSM979642; labExpId=CThi10104ATC; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpiepcCellPapMinusRawRep1; type=bigWig; md5sum=0a3377455716db23914aceef8ab761e5; size=6.6M
wgEncodeRikenCageHpiepcCellPapMinusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HPIEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002747; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6620; geoSampleAccession=GSM979642; labExpId=CThi10101GAT; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpiepcCellPapMinusRawRep2; type=bigWig; md5sum=0b3d7328a67b0df52530a5e3d5345d40; size=2.0M
wgEncodeRikenCageHpiepcCellPapPlusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HPIEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002747; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6610; geoSampleAccession=GSM979642; labExpId=CThi10104ATC; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpiepcCellPapPlusRawRep1; type=bigWig; md5sum=d79e654f44e248aaf1781ce4a7f537a6; size=6.5M
wgEncodeRikenCageHpiepcCellPapPlusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HPIEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002747; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6620; geoSampleAccession=GSM979642; labExpId=CThi10101GAT; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpiepcCellPapPlusRawRep2; type=bigWig; md5sum=a8709a586ab01bcc73be2be002150efb; size=1.9M
wgEncodeRikenCageHpiepcCellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HPIEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=9041503.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002747; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6449; geoSampleAccession=GSM979642; labExpId=CThi10104ATC; bioRep=073WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=ff32096d5b9edad58554df8054b696ff; size=480M
wgEncodeRikenCageHpiepcCellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HPIEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002747; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6459; geoSampleAccession=GSM979642; labExpId=CThi10101GAT; bioRep=074WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=f537efe7b38a98b8ef4e37ff2189015f; size=92M
wgEncodeRikenCageHpiepcCellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HPIEpC; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=9041503.2,9012801.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002747; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6731; geoSampleAccession=GSM979642; labExpId=CThi10104ATC,CThi10101GAT; bioRep=073WC,074WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHpiepcCellPapTssHmm; type=bedRnaElements; md5sum=cd52198e6b309dce58fc32b9cdd70088; size=513K
wgEncodeRikenCageHsavecCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HSaVEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002748; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6671; labExpId=CThi10102ACA; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHsavecCellPapAlnRep1; type=bam; md5sum=d8a789cc77f1e0e3be96e2d733321edb; size=868M
wgEncodeRikenCageHsavecCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HSaVEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002748; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6671; labExpId=CThi10102ACA; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHsavecCellPapAlnRep1; type=bai; md5sum=03df28e1a279c8314e57fe56742e0edf; size=4.2M
wgEncodeRikenCageHsavecCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HSaVEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002748; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6702; labExpId=CThi10102ATC; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHsavecCellPapAlnRep2; type=bam; md5sum=2e6a99fc78a6fd7c98c030c22ef69c11; size=566M
wgEncodeRikenCageHsavecCellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HSaVEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002748; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6702; labExpId=CThi10102ATC; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHsavecCellPapAlnRep2; type=bai; md5sum=a9876ca8257ed2bf83ebb53ecc965b72; size=3.5M
wgEncodeRikenCageHsavecCellPapMinusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HSaVEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002748; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6609; geoSampleAccession=GSM979645; labExpId=CThi10102ACA; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHsavecCellPapMinusRawRep1; type=bigWig; md5sum=5bcdaa0f32ac79bdb47b105f01374fc5; size=15M
wgEncodeRikenCageHsavecCellPapMinusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HSaVEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002748; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6640; geoSampleAccession=GSM979645; labExpId=CThi10102ATC; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHsavecCellPapMinusRawRep2; type=bigWig; md5sum=e035bc418866b3e580bb12695a40cda4; size=9.8M
wgEncodeRikenCageHsavecCellPapPlusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HSaVEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002748; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6609; geoSampleAccession=GSM979645; labExpId=CThi10102ACA; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHsavecCellPapPlusRawRep1; type=bigWig; md5sum=e348c0627c08f0e86d137e10a8ca3db0; size=15M
wgEncodeRikenCageHsavecCellPapPlusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HSaVEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002748; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6640; geoSampleAccession=GSM979645; labExpId=CThi10102ATC; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHsavecCellPapPlusRawRep2; type=bigWig; md5sum=cc842f2ceb1685f8d8c5a7cba94d83fe; size=9.6M
wgEncodeRikenCageHsavecCellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HSaVEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=0022202.16; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002748; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6448; geoSampleAccession=GSM979645; labExpId=CThi10102ACA; bioRep=093WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=d8234203a67f2d02bb0c405d2b9fb29a; size=1.4G
wgEncodeRikenCageHsavecCellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HSaVEC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002748; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6479; geoSampleAccession=GSM979645; labExpId=CThi10102ATC; bioRep=094WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=db899de1400ffcd4416b5230d3ef9dec; size=870M
wgEncodeRikenCageHsavecCellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HSaVEC; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=0022202.16,9100101.15; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002748; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6737; geoSampleAccession=GSM979645; labExpId=CThi10102ACA,CThi10102ATC; bioRep=093WC,094WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHsavecCellPapTssHmm; type=bedRnaElements; md5sum=534dba862caf1e62bacc5b7286bdc28c; size=1.3M
wgEncodeRikenCageHuvecCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001141; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2376; labExpId=J78; bioRep=009WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecCellPapAlnRep1; type=bam; md5sum=537b2508198602e5da0c6f947a25146b; size=618M
wgEncodeRikenCageHuvecCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001141; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2376; labExpId=J78; bioRep=009WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecCellPapAlnRep1; type=bai; md5sum=740f8a7b69eb12c1ef235e6557f29295; size=4.8M
wgEncodeRikenCageHuvecCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HUVEC; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001141; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2388; labExpId=J79; bioRep=010WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageHuvecCellPapAlnRep2; type=bam; md5sum=c50d709d79cd25c8de7b46bf3122db2a; size=626M
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wgEncodeRikenCageHvmfCellPapPlusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HVMF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002750; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6611; geoSampleAccession=GSM979660; labExpId=CThi10035; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHvmfCellPapPlusRawRep2; type=bigWig; md5sum=706f3e2b39370f47c84ac2ed1452f438; size=16M
wgEncodeRikenCageHvmfCellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HVMF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6091203.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002750; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6433; geoSampleAccession=GSM979660; labExpId=CThi10034; bioRep=051WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=5fc59df23edea28a3d417e10d474fe45; size=2.3G
wgEncodeRikenCageHvmfCellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HVMF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002750; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6450; geoSampleAccession=GSM979660; labExpId=CThi10035; bioRep=052WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=101789c4fb73ae904a468529be5063f0; size=2.5G
wgEncodeRikenCageHvmfCellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HVMF; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=6091203.3,6100401.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002750; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6729; geoSampleAccession=GSM979660; labExpId=CThi10034,CThi10035; bioRep=051WC,052WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHvmfCellPapTssHmm; type=bedRnaElements; md5sum=e0759899d336dbf094ac38036181639f; size=1.5M
wgEncodeRikenCageHwpCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HWP; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002751; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6663; labExpId=CThi10101ACA; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHwpCellPapAlnRep1; type=bam; md5sum=955a78cf6652d5977d4e79211c31e9d0; size=1.4G
wgEncodeRikenCageHwpCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HWP; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002751; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6663; labExpId=CThi10101ACA; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHwpCellPapAlnRep1; type=bai; md5sum=dfba5cadc6009bc4173eed89157c66d2; size=4.6M
wgEncodeRikenCageHwpCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HWP; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002751; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6680; labExpId=CThi10101ATC; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHwpCellPapAlnRep2; type=bam; md5sum=8ec97ae6d082538cea50ce81046f9dba; size=358M
wgEncodeRikenCageHwpCellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=HWP; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002751; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6680; labExpId=CThi10101ATC; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHwpCellPapAlnRep2; type=bai; md5sum=98c34734b79b380cd5408b9115ca79ab; size=3.4M
wgEncodeRikenCageHwpCellPapMinusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HWP; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002751; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6601; geoSampleAccession=GSM979661; labExpId=CThi10101ACA; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHwpCellPapMinusRawRep1; type=bigWig; md5sum=6dfa2d709169cb3c93229ae0c25abc5d; size=20M
wgEncodeRikenCageHwpCellPapMinusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=HWP; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002751; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6617; geoSampleAccession=GSM979661; labExpId=CThi10101ATC; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHwpCellPapMinusRawRep2; type=bigWig; md5sum=7e1d87a6f9cfb09e3251d1d1f88668cf; size=8.5M
wgEncodeRikenCageHwpCellPapPlusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HWP; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002751; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6601; geoSampleAccession=GSM979661; labExpId=CThi10101ACA; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHwpCellPapPlusRawRep1; type=bigWig; md5sum=7715e67aca62a27c51f2734b3deacdbb; size=19M
wgEncodeRikenCageHwpCellPapPlusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=HWP; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002751; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6617; geoSampleAccession=GSM979661; labExpId=CThi10101ATC; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHwpCellPapPlusRawRep2; type=bigWig; md5sum=9f2fa6a405dffc931cfa231a462236b4; size=8.4M
wgEncodeRikenCageHwpCellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HWP; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=8120201.5; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002751; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6440; geoSampleAccession=GSM979661; labExpId=CThi10101ACA; bioRep=079WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=bfe0beccc15bd7111be03465e76523cb; size=2.1G
wgEncodeRikenCageHwpCellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=HWP; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002751; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6456; geoSampleAccession=GSM979661; labExpId=CThi10101ATC; bioRep=080WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=4b39033f59c0b4eda0fb1d26e63b60bc; size=555M
wgEncodeRikenCageHwpCellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=HWP; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=8120201.5,0092205; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002751; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6724; geoSampleAccession=GSM979661; labExpId=CThi10101ACA,CThi10101ATC; bioRep=079WC,080WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageHwpCellPapTssHmm; type=bedRnaElements; md5sum=f4fdfaecc08086094a6bc4968dbb2452; size=1.6M
wgEncodeRikenCageImr90CellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002754; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6699; labExpId=CThi10016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CellPapAlnRep1; type=bam; md5sum=c2335bded6de5331039157874f05cc4b; size=1.4G
wgEncodeRikenCageImr90CellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002754; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6699; labExpId=CThi10016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CellPapAlnRep1; type=bai; md5sum=7738469cfaa9957e2bd0f96e01560460; size=4.5M
wgEncodeRikenCageImr90CellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002754; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6705; labExpId=CThi10018; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CellPapAlnRep2; type=bam; md5sum=5e684acbcc1101595867090c30c4248d; size=1.4G
wgEncodeRikenCageImr90CellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002754; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6705; labExpId=CThi10018; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CellPapAlnRep2; type=bai; md5sum=92c5defd0bbe610997a999cc1fc21dff; size=4.1M
wgEncodeRikenCageImr90CellPapMinusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002754; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6637; geoSampleAccession=GSM979656; labExpId=CThi10016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CellPapMinusRawRep1; type=bigWig; md5sum=b2d0c91d42af965d82596f89ee2bcaca; size=23M
wgEncodeRikenCageImr90CellPapMinusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002754; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6643; geoSampleAccession=GSM979656; labExpId=CThi10018; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CellPapMinusRawRep2; type=bigWig; md5sum=216063c7658e4339b814d03911880c7e; size=19M
wgEncodeRikenCageImr90CellPapPlusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002754; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6637; geoSampleAccession=GSM979656; labExpId=CThi10016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CellPapPlusRawRep1; type=bigWig; md5sum=563adaeef1fd7d4793b339c0893ccbee; size=23M
wgEncodeRikenCageImr90CellPapPlusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002754; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6643; geoSampleAccession=GSM979656; labExpId=CThi10018; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CellPapPlusRawRep2; type=bigWig; md5sum=5678a852bb2659e5d39f3175e57eafe2; size=19M
wgEncodeRikenCageImr90CellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002754; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6476; geoSampleAccession=GSM979656; labExpId=CThi10016; bioRep=045WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=fd30013874d7b00aac4f0c096c285628; size=2.0G
wgEncodeRikenCageImr90CellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002754; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6482; geoSampleAccession=GSM979656; labExpId=CThi10018; bioRep=046WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=a6616539e4546f6a68129faa766383d8; size=2.1G
wgEncodeRikenCageImr90CellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=IMR90; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002754; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6740; geoSampleAccession=GSM979656; labExpId=CThi10016,CThi10018; bioRep=045WC,046WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CellPapTssHmm; type=bedRnaElements; md5sum=ed8a42b89e625c6c81d4ebad776bd405; size=4.5M
wgEncodeRikenCageImr90CytosolPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002752; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6650; labExpId=CThi10017; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CytosolPapAlnRep1; type=bam; md5sum=f122c6385dc0f344731461807b3db92d; size=1.4G
wgEncodeRikenCageImr90CytosolPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002752; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6650; labExpId=CThi10017; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CytosolPapAlnRep1; type=bai; md5sum=1f60da97236f425a6c26f4afc4bde66b; size=4.3M
wgEncodeRikenCageImr90CytosolPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002752; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6703; labExpId=CThi10019; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CytosolPapAlnRep2; type=bam; md5sum=697dc4edb97813385ec00964f6233e0e; size=1.5G
wgEncodeRikenCageImr90CytosolPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002752; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6703; labExpId=CThi10019; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CytosolPapAlnRep2; type=bai; md5sum=ae91cc7ef4df204611bf7af138dd7b68; size=4.2M
wgEncodeRikenCageImr90CytosolPapMinusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002752; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6588; geoSampleAccession=GSM979658; labExpId=CThi10017; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CytosolPapMinusRawRep1; type=bigWig; md5sum=d4e958a599f0c28f47f516b0e32c0901; size=26M
wgEncodeRikenCageImr90CytosolPapMinusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002752; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6642; geoSampleAccession=GSM979658; labExpId=CThi10019; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CytosolPapMinusRawRep2; type=bigWig; md5sum=676e843762c9928bd8259e354e7c9c67; size=25M
wgEncodeRikenCageImr90CytosolPapPlusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002752; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6588; geoSampleAccession=GSM979658; labExpId=CThi10017; bioRep=045C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CytosolPapPlusRawRep1; type=bigWig; md5sum=25e760b51fe5be3a33da99a9193197bb; size=25M
wgEncodeRikenCageImr90CytosolPapPlusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=IMR90; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002752; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6642; geoSampleAccession=GSM979658; labExpId=CThi10019; bioRep=046C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90CytosolPapPlusRawRep2; type=bigWig; md5sum=3d7e529799fd90aaec6c24d765ef3268; size=25M
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wgEncodeRikenCageImr90NucleusPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002753; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6651; labExpId=CThi10025; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90NucleusPapAlnRep1; type=bam; md5sum=6e57934b6bebc430b0ee9d601a611548; size=1.1G
wgEncodeRikenCageImr90NucleusPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002753; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6651; labExpId=CThi10025; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90NucleusPapAlnRep1; type=bai; md5sum=35afa06fb0ae3659a0ee6c70dc7b5b86; size=5.4M
wgEncodeRikenCageImr90NucleusPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002753; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6656; labExpId=CThi10026; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90NucleusPapAlnRep2; type=bam; md5sum=3472a0e19e670e505fbab834d7a7e22c; size=1.7G
wgEncodeRikenCageImr90NucleusPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002753; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6656; labExpId=CThi10026; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90NucleusPapAlnRep2; type=bai; md5sum=1d7ef806221488b825a2dd284f0bd922; size=5.5M
wgEncodeRikenCageImr90NucleusPapMinusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002753; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6589; geoSampleAccession=GSM979659; labExpId=CThi10025; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90NucleusPapMinusRawRep1; type=bigWig; md5sum=93ef825b02d40e6adc9f92aa24f62f74; size=37M
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wgEncodeRikenCageImr90NucleusPapPlusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002753; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6589; geoSampleAccession=GSM979659; labExpId=CThi10025; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90NucleusPapPlusRawRep1; type=bigWig; md5sum=3b354dbcdd2f5c85ea335d59a018f711; size=42M
wgEncodeRikenCageImr90NucleusPapPlusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002753; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6593; geoSampleAccession=GSM979659; labExpId=CThi10026; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90NucleusPapPlusRawRep2; type=bigWig; md5sum=c10fa87ffac7ba4c2c3702f09c3a7e0a; size=53M
wgEncodeRikenCageImr90NucleusPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002753; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6428; geoSampleAccession=GSM979659; labExpId=CThi10025; bioRep=045N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=cbcd86e519ee777e87e6fe14606bfec1; size=1.9G
wgEncodeRikenCageImr90NucleusPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002753; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6432; geoSampleAccession=GSM979659; labExpId=CThi10026; bioRep=046N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=4720cb72dc8e4bcb44c96a666643f9c9; size=2.4G
wgEncodeRikenCageImr90NucleusPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=IMR90; localization=nucleus; rnaExtract=longPolyA; readType=1x50; donorId=58607680; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002753; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6721; geoSampleAccession=GSM979659; labExpId=CThi10025,CThi10026; bioRep=045N,046N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageImr90NucleusPapTssHmm; type=bedRnaElements; md5sum=62e8c293813ed138b39231bf6b4bcf11; size=6.5M
wgEncodeRikenCageK562CellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001150; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2359; labExpId=J70; bioRep=001WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562CellPapAlnRep1; type=bam; md5sum=72474aac692f85f799fce7390f57b0e8; size=539M
wgEncodeRikenCageK562CellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001150; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2359; labExpId=J70; bioRep=001WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562CellPapAlnRep1; type=bai; md5sum=3657976be404b8230c4dc7eccdb21712; size=4.9M
wgEncodeRikenCageK562CellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=K562; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001150; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2362; labExpId=J71; bioRep=002WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageK562CellPapAlnRep2; type=bam; md5sum=0b3b753312128c5bdaf4c26d5efa2fc2; size=577M
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wgEncodeRikenCageMcf7CellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=MCF-7; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001151; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3425; geoSampleAccession=GSM849364; labExpId=K11; bioRep=016WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=cb3f964491ca3adf30f4fa6082d29363; size=317M
wgEncodeRikenCageMcf7CellPapTssGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=MCF-7; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001151; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4521; geoSampleAccession=GSM849364; labExpId=K07,K11; bioRep=015WC,016WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=d06d095e747daaf1137f81da567c2d80; size=3.1M
wgEncodeRikenCageMcf7CellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=MCF-7; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001151; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849364; labExpId=K07,K11; bioRep=015WC,016WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageMcf7CellPapTssHmm; type=bedRnaElements; md5sum=32fd7d2176d2f79b610fc49696232122; size=3.0M
wgEncodeRikenCageMcf7CytosolPapAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002755; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6678; labExpId=CThi10051; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMcf7CytosolPapAlnRep3; type=bam; md5sum=790a2e0fd18ce20006120ef89adce32b; size=801M
wgEncodeRikenCageMcf7CytosolPapAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002755; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6678; labExpId=CThi10051; bioRep=089C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMcf7CytosolPapAlnRep3; type=bai; md5sum=9ce76cdd9d5465ba03a9421e6a004e6a; size=4.0M
wgEncodeRikenCageMcf7CytosolPapAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=MCF-7; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002755; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6667; labExpId=CThi10053; bioRep=090C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMcf7CytosolPapAlnRep4; type=bam; md5sum=7f52832695331b51b7a91e295e8eab63; size=1.4G
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wgEncodeRikenCageMcf7NucleusPapRawDataRep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002756; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6430; geoSampleAccession=GSM979654; labExpId=CThi10054; bioRep=090N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=3b22221eab40e9bde8ba7b5faaa2539b; size=973M
wgEncodeRikenCageMcf7NucleusPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=MCF-7; localization=nucleus; rnaExtract=longPolyA; readType=1x50; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002756; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6738; geoSampleAccession=GSM979654; labExpId=CThi10052,CThi10054; bioRep=089N,090N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMcf7NucleusPapTssHmm; type=bedRnaElements; md5sum=2cad78608842b890816b348a2f401faa; size=4.5M
wgEncodeRikenCageMonocd14CellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002757; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6649; labExpId=CThi10021; bioRep=039WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMonocd14CellPapAlnRep1; type=bam; md5sum=227796481580d16e5502d58297b33d31; size=1.3G
wgEncodeRikenCageMonocd14CellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002757; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6649; labExpId=CThi10021; bioRep=039WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMonocd14CellPapAlnRep1; type=bai; md5sum=8d4ef758fed28b6b34f06aa70b4bc5fe; size=5.2M
wgEncodeRikenCageMonocd14CellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002757; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6683; labExpId=CThi10022; bioRep=040WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMonocd14CellPapAlnRep2; type=bam; md5sum=4c8c7dfec9b4ef166d8fc55b62b5770d; size=1.4G
wgEncodeRikenCageMonocd14CellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002757; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6683; labExpId=CThi10022; bioRep=040WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMonocd14CellPapAlnRep2; type=bai; md5sum=ae81d4ca260f27eb2abe262d68be73f4; size=5.1M
wgEncodeRikenCageMonocd14CellPapMinusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002757; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6587; geoSampleAccession=GSM979655; labExpId=CThi10021; bioRep=039WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMonocd14CellPapMinusRawRep1; type=bigWig; md5sum=ccb9c91e263282b3235e39b002f8bc0c; size=24M
wgEncodeRikenCageMonocd14CellPapMinusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002757; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6621; geoSampleAccession=GSM979655; labExpId=CThi10022; bioRep=040WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMonocd14CellPapMinusRawRep2; type=bigWig; md5sum=7e8709967ca09e9e7959e5cd0d5b829c; size=22M
wgEncodeRikenCageMonocd14CellPapPlusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002757; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6587; geoSampleAccession=GSM979655; labExpId=CThi10021; bioRep=039WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMonocd14CellPapPlusRawRep1; type=bigWig; md5sum=1849459d601e26a645ff55bdc1b4d913; size=28M
wgEncodeRikenCageMonocd14CellPapPlusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002757; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6621; geoSampleAccession=GSM979655; labExpId=CThi10022; bioRep=040WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMonocd14CellPapPlusRawRep2; type=bigWig; md5sum=9aa4c0910bafb529c27223690f8ced0a; size=25M
wgEncodeRikenCageMonocd14CellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002757; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6426; geoSampleAccession=GSM979655; labExpId=CThi10021; bioRep=039WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=77f1f2306ae9208dad1e0938509444dd; size=2.0G
wgEncodeRikenCageMonocd14CellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002757; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6460; geoSampleAccession=GSM979655; labExpId=CThi10022; bioRep=040WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=b7ac3bdeecb796f7efcc375b782c9b39; size=2.0G
wgEncodeRikenCageMonocd14CellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=Monocytes-CD14+; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=RO01746; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002757; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6715; geoSampleAccession=GSM979655; labExpId=CThi10021,CThi10022; bioRep=039WC,040WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageMonocd14CellPapTssHmm; type=bedRnaElements; md5sum=e44371b91fd0bb68b25c4231941fe096; size=2.7M
wgEncodeRikenCageNhdfCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHDF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002758; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6694; labExpId=CThi10032; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhdfCellPapAlnRep1; type=bam; md5sum=f8a20215289c5f3f5350100b6f2d5fc0; size=1.8G
wgEncodeRikenCageNhdfCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHDF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002758; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6694; labExpId=CThi10032; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhdfCellPapAlnRep1; type=bai; md5sum=b3330e915ab29c8788baf882ac68b5eb; size=4.4M
wgEncodeRikenCageNhdfCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHDF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002758; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6696; labExpId=CThi10033; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhdfCellPapAlnRep2; type=bam; md5sum=2afca48f2a1806ebb2fb6880c9ac3b4c; size=1.6G
wgEncodeRikenCageNhdfCellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHDF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002758; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6696; labExpId=CThi10033; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhdfCellPapAlnRep2; type=bai; md5sum=af76291ddb700a454f79652df8b844d3; size=3.9M
wgEncodeRikenCageNhdfCellPapMinusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=NHDF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002758; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6631; geoSampleAccession=GSM979662; labExpId=CThi10032; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhdfCellPapMinusRawRep1; type=bigWig; md5sum=790b563849165cb855ed4ffb324a91a2; size=18M
wgEncodeRikenCageNhdfCellPapMinusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=NHDF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002758; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6634; geoSampleAccession=GSM979662; labExpId=CThi10033; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhdfCellPapMinusRawRep2; type=bigWig; md5sum=5c593d1118d79c30fe111c356272593f; size=12M
wgEncodeRikenCageNhdfCellPapPlusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=NHDF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002758; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6631; geoSampleAccession=GSM979662; labExpId=CThi10032; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhdfCellPapPlusRawRep1; type=bigWig; md5sum=cb80d317a9ef95a15297d99a355b15d9; size=18M
wgEncodeRikenCageNhdfCellPapPlusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=NHDF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002758; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6634; geoSampleAccession=GSM979662; labExpId=CThi10033; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhdfCellPapPlusRawRep2; type=bigWig; md5sum=92ba0bc620b30dbe71f544d9ad71d91a; size=12M
wgEncodeRikenCageNhdfCellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=NHDF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7071701.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002758; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6469; geoSampleAccession=GSM979662; labExpId=CThi10032; bioRep=049WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=b43d322b489b0d416e7c2014cd356a47; size=3.0G
wgEncodeRikenCageNhdfCellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=NHDF; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002758; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6473; geoSampleAccession=GSM979662; labExpId=CThi10033; bioRep=050WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=7c15e090180a3b883344bf0f2ac3d730; size=2.4G
wgEncodeRikenCageNhdfCellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=NHDF; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=7071701.2,0060801.3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002758; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6730; geoSampleAccession=GSM979662; labExpId=CThi10032,CThi10033; bioRep=049WC,050WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhdfCellPapTssHmm; type=bedRnaElements; md5sum=590935f5c6400900191a9724fdd1eaff; size=1.7M
wgEncodeRikenCageNhekCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001152; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2372; labExpId=J76; bioRep=007WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCellPapAlnRep1; type=bam; md5sum=883264f44451a2e311de7c8797b3e1d4; size=587M
wgEncodeRikenCageNhekCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001152; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2372; labExpId=J76; bioRep=007WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCellPapAlnRep1; type=bai; md5sum=bca070302983d4e307c087bd7e94c488; size=4.7M
wgEncodeRikenCageNhekCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001152; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2361; labExpId=J77; bioRep=008WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCellPapAlnRep2; type=bam; md5sum=f5326f647a5302771f1ea7625f4d7042; size=601M
wgEncodeRikenCageNhekCellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEK; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001152; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2361; labExpId=J77; bioRep=008WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCellPapAlnRep2; type=bai; md5sum=d44b51e1de7b76a3d47a4793671b7c69; size=4.7M
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wgEncodeRikenCageNhekCellPapMinusSignalRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=NHEK; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001152; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2372; geoSampleAccession=GSM849367; labExpId=J76; bioRep=007WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCellPapMinusSignalRep1; type=bigWig; md5sum=cb87b610e265b22898e57000cce919f8; size=4.5M
wgEncodeRikenCageNhekCellPapMinusSignalRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=NHEK; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001152; dateSubmitted=2010-09-21; dateUnrestricted=2011-06-21; subId=2361; geoSampleAccession=GSM849367; labExpId=J77; bioRep=008WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageNhekCellPapMinusSignalRep2; type=bigWig; md5sum=f6130549c92a04c88a95771417f92546; size=4.5M
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wgEncodeRikenCageNhemfm2CellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=NHEM.f_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=6022001; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002759; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6441; geoSampleAccession=GSM979663; labExpId=CThi10102CTT; bioRep=081WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=292f9de2ccf12cbc99259b965b9963ec; size=891M
wgEncodeRikenCageNhemfm2CellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=NHEM.f_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002759; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6477; geoSampleAccession=GSM979663; labExpId=CThi10055; bioRep=082WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=4a2816adb4bd9b3e3581ddca2e04de71; size=3.2G
wgEncodeRikenCageNhemfm2CellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=NHEM.f_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=6022001,5071302.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002759; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6713; geoSampleAccession=GSM979663; labExpId=CThi10102CTT,CThi10055; bioRep=081WC,082WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemfm2CellPapTssHmm; type=bedRnaElements; md5sum=04bc7b8653648a4d0321c90876d67505; size=1.7M
wgEncodeRikenCageNhemm2CellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEM_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002760; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6708; labExpId=CThi10056; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemm2CellPapAlnRep1; type=bam; md5sum=ae918db6511e43f591df076f312f49ae; size=1.7G
wgEncodeRikenCageNhemm2CellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEM_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002760; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6708; labExpId=CThi10056; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemm2CellPapAlnRep1; type=bai; md5sum=2d3be8a5f415d28e52fe88b682bfafe5; size=4.1M
wgEncodeRikenCageNhemm2CellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEM_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002760; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6654; labExpId=CThi10102GAT; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemm2CellPapAlnRep2; type=bam; md5sum=0767dbdff31cf0fab83385858214411d; size=997M
wgEncodeRikenCageNhemm2CellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=NHEM_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002760; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6654; labExpId=CThi10102GAT; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemm2CellPapAlnRep2; type=bai; md5sum=452776aa5dd2c38c26a8347836578918; size=4.4M
wgEncodeRikenCageNhemm2CellPapMinusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=NHEM_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002760; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6646; geoSampleAccession=GSM979649; labExpId=CThi10056; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemm2CellPapMinusRawRep1; type=bigWig; md5sum=8a27c5f5c4281c88a9b8b2299b846fb3; size=11M
wgEncodeRikenCageNhemm2CellPapMinusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=NHEM_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002760; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6592; geoSampleAccession=GSM979649; labExpId=CThi10102GAT; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemm2CellPapMinusRawRep2; type=bigWig; md5sum=e6daea64e9383b534cefae2f2d0d1e81; size=17M
wgEncodeRikenCageNhemm2CellPapPlusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=NHEM_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002760; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6646; geoSampleAccession=GSM979649; labExpId=CThi10056; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemm2CellPapPlusRawRep1; type=bigWig; md5sum=de44e6317874b1926943c8d037f9e4d9; size=11M
wgEncodeRikenCageNhemm2CellPapPlusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=NHEM_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002760; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6592; geoSampleAccession=GSM979649; labExpId=CThi10102GAT; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemm2CellPapPlusRawRep2; type=bigWig; md5sum=24299f7c340356dd3fbeb95cc677b587; size=17M
wgEncodeRikenCageNhemm2CellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=NHEM_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=7012303; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002760; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6485; geoSampleAccession=GSM979649; labExpId=CThi10056; bioRep=083WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=664198af214886cb91fb346cef8f151d; size=3.1G
wgEncodeRikenCageNhemm2CellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=NHEM_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002760; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6431; geoSampleAccession=GSM979649; labExpId=CThi10102GAT; bioRep=084WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=f80926a3d4112090861fc77173bb225e; size=1.5G
wgEncodeRikenCageNhemm2CellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=NHEM_M2; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=7012303,7011001.2; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002760; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6743; geoSampleAccession=GSM979649; labExpId=CThi10056,CThi10102GAT; bioRep=083WC,084WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageNhemm2CellPapTssHmm; type=bedRnaElements; md5sum=d1a323a4b8f419721d401ec71c5618e3; size=2.2M
wgEncodeRikenCageProstateCellLongnonpolyaAln.bam	objStatus=renamed; project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=prostate; localization=cell; rnaExtract=longNonPolyA; replicate=0; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000331; dateSubmitted=2008-12-09; dateResubmitted=2010-09-22; dateUnrestricted=2009-09-09; subId=1813; bioRep=Generation 0; softwareVersion=Delve version 0.9; tableName=wgEncodeRikenCageProstateCellLongnonpolyaAln; type=bam; md5sum=1d926e84501daaf20f7cde1c46108b77; size=625M
wgEncodeRikenCageProstateCellLongnonpolyaAln.bam.bai	objStatus=renamed; project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=prostate; localization=cell; rnaExtract=longNonPolyA; replicate=0; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000331; dateSubmitted=2008-12-09; dateResubmitted=2010-09-22; dateUnrestricted=2009-09-09; subId=1813; bioRep=Generation 0; softwareVersion=Delve version 0.9; tableName=wgEncodeRikenCageProstateCellLongnonpolyaAln; type=bai; md5sum=014c00e373ac850d626e74af1997afce; size=5.6M
wgEncodeRikenCageProstateCellLongnonpolyaMinusClusters.bigWig	objStatus=renamed; project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=prostate; localization=cell; rnaExtract=longNonPolyA; replicate=0; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000331; dateSubmitted=2008-12-09; dateResubmitted=2010-09-22; dateUnrestricted=2009-09-09; subId=1813; bioRep=Generation 0; softwareVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageProstateCellLongnonpolyaMinusClusters; type=bigWig; md5sum=78471d5d5a867cd1642a09261f239926; size=17M
wgEncodeRikenCageProstateCellLongnonpolyaPlusClusters.bigWig	objStatus=renamed; project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=prostate; localization=cell; rnaExtract=longNonPolyA; replicate=0; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000331; dateSubmitted=2008-12-09; dateResubmitted=2010-09-22; dateUnrestricted=2009-09-09; subId=1813; bioRep=Generation 0; softwareVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageProstateCellLongnonpolyaPlusClusters; type=bigWig; md5sum=5e23eeff74cfa82ed6bfcbcda7eb02c4; size=17M
wgEncodeRikenCageProstateCellLongnonpolyaRawData.csfasta.gz	objStatus=revoked - bad data from old release; project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=prostate; localization=cell; rnaExtract=longNonPolyA; replicate=0; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000331; dateSubmitted=2008-12-09; dateResubmitted=2010-09-24; dateUnrestricted=2009-09-09; subId=2438; geoSampleAccession=GSM849336; bioRep=Generation 0; type=csfasta; md5sum=d149812b46a088135f76b11ee02ca828; size=340M
wgEncodeRikenCageProstateCellLongnonpolyaRawData2.csqual.gz	objStatus=revoked - bad data from old release; project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData2; cell=prostate; localization=cell; rnaExtract=longNonPolyA; replicate=0; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000331; dateSubmitted=2008-12-09; dateResubmitted=2010-09-24; dateUnrestricted=2009-09-09; subId=2438; geoSampleAccession=GSM849336; bioRep=Generation 0; type=csqual; md5sum=db1ae71115cabc68f4770cea867eaae8; size=758M
wgEncodeRikenCageProstateCellPamAln.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=prostate; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000331; dateSubmitted=2008-12-09; dateResubmitted=2010-09-22; dateUnrestricted=2009-09-09; subId=1813; labExpId=I09; bioRep=gen0159WC; softwareVersion=Delve version 0.9; tableName=wgEncodeRikenCageProstateCellPamAln; type=bam; md5sum=1d926e84501daaf20f7cde1c46108b77; size=625M
wgEncodeRikenCageProstateCellPamAln.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=prostate; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000331; dateSubmitted=2008-12-09; dateResubmitted=2010-09-22; dateUnrestricted=2009-09-09; subId=1813; labExpId=I09; bioRep=gen0159WC; softwareVersion=Delve version 0.9; tableName=wgEncodeRikenCageProstateCellPamAln; type=bai; md5sum=014c00e373ac850d626e74af1997afce; size=5.6M
wgEncodeRikenCageProstateCellPamMinusSignal.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=prostate; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000331; dateSubmitted=2008-12-09; dateResubmitted=2010-09-22; dateUnrestricted=2009-09-09; subId=1813; geoSampleAccession=GSM849336; labExpId=I09; bioRep=gen0159WC; softwareVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageProstateCellPamMinusSignal; type=bigWig; md5sum=78471d5d5a867cd1642a09261f239926; size=17M
wgEncodeRikenCageProstateCellPamPlusSignal.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=prostate; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000331; dateSubmitted=2008-12-09; dateResubmitted=2010-09-22; dateUnrestricted=2009-09-09; subId=1813; geoSampleAccession=GSM849336; labExpId=I09; bioRep=gen0159WC; softwareVersion=bedtools v2.7.1; tableName=wgEncodeRikenCageProstateCellPamPlusSignal; type=bigWig; md5sum=5e23eeff74cfa82ed6bfcbcda7eb02c4; size=17M
wgEncodeRikenCageProstateCellPamRawData.csfasta.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=prostate; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000331; dateSubmitted=2008-12-09; dateResubmitted=2010-09-24; dateUnrestricted=2009-09-09; subId=2438; geoSampleAccession=GSM849336; labExpId=I09; bioRep=gen0159WC; type=csfasta; md5sum=d149812b46a088135f76b11ee02ca828; size=340M
wgEncodeRikenCageProstateCellPamRawData2.csqual.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData2; cell=prostate; localization=cell; rnaExtract=longNonPolyA; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH000331; dateSubmitted=2008-12-09; dateResubmitted=2010-09-24; dateUnrestricted=2009-09-09; subId=2438; geoSampleAccession=GSM849336; labExpId=I09; bioRep=gen0159WC; type=csqual; md5sum=db1ae71115cabc68f4770cea867eaae8; size=758M
wgEncodeRikenCageSkmcCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SkMC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002764; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6669; labExpId=CThi10030; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSkmcCellPapAlnRep1; type=bam; md5sum=b8f668de1bae74a6f04db7eb810abd51; size=1.6G
wgEncodeRikenCageSkmcCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SkMC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002764; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6669; labExpId=CThi10030; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSkmcCellPapAlnRep1; type=bai; md5sum=048870092514ce709b9a6ec277c9b35c; size=4.2M
wgEncodeRikenCageSkmcCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SkMC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002764; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6659; labExpId=CThi10031; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSkmcCellPapAlnRep2; type=bam; md5sum=c96c5c3ad06556b68e18136080c088c2; size=1.8G
wgEncodeRikenCageSkmcCellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SkMC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002764; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6659; labExpId=CThi10031; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSkmcCellPapAlnRep2; type=bai; md5sum=5e6466a7ddfa44b15808891afc3c6f6f; size=4.3M
wgEncodeRikenCageSkmcCellPapMinusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=SkMC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002764; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6606; geoSampleAccession=GSM979653; labExpId=CThi10030; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSkmcCellPapMinusRawRep1; type=bigWig; md5sum=fbda9553d7cd84a2037e1fc4efe60ed2; size=17M
wgEncodeRikenCageSkmcCellPapMinusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=SkMC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002764; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6599; geoSampleAccession=GSM979653; labExpId=CThi10031; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSkmcCellPapMinusRawRep2; type=bigWig; md5sum=259aad4e44798a0219472cc2a2dc9db7; size=18M
wgEncodeRikenCageSkmcCellPapPlusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=SkMC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002764; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6606; geoSampleAccession=GSM979653; labExpId=CThi10030; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSkmcCellPapPlusRawRep1; type=bigWig; md5sum=77f4a41730e40a72cc94b108d4aa84d2; size=20M
wgEncodeRikenCageSkmcCellPapPlusRawRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=SkMC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002764; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6599; geoSampleAccession=GSM979653; labExpId=CThi10031; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSkmcCellPapPlusRawRep2; type=bigWig; md5sum=f73c49e37a8d58060c000ad440eb46bd; size=21M
wgEncodeRikenCageSkmcCellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=SkMC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=1; donorId=9011302; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002764; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6446; geoSampleAccession=GSM979653; labExpId=CThi10030; bioRep=047WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=2e86d7546804759d5105ce1d9deb9bc6; size=2.5G
wgEncodeRikenCageSkmcCellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=SkMC; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=2; donorId=8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002764; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6435; geoSampleAccession=GSM979653; labExpId=CThi10031; bioRep=048WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=7bc5587bcdd437ed5562fe89d9ece389; size=2.9G
wgEncodeRikenCageSkmcCellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=SkMC; localization=cell; rnaExtract=longPolyA; readType=1x50; donorId=9011302,8121902.17; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002764; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6732; geoSampleAccession=GSM979653; labExpId=CThi10030,CThi10031; bioRep=047WC,048WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSkmcCellPapTssHmm; type=bedRnaElements; md5sum=c87de368abf9533f40ea230bb6b504f7; size=1.9M
wgEncodeRikenCageSknshCellPapAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002763; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6660; labExpId=CThi10043; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCellPapAlnRep3; type=bam; md5sum=7be510bc3ee8df879967caff196e31f0; size=1.9G
wgEncodeRikenCageSknshCellPapAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002763; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6660; labExpId=CThi10043; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCellPapAlnRep3; type=bai; md5sum=342efb20e882d2d239f174028a49e3dc; size=5.0M
wgEncodeRikenCageSknshCellPapAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002763; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6692; labExpId=CThi10046; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCellPapAlnRep4; type=bam; md5sum=0f9a4d2dbb049af17b4f056c064f4e4b; size=1.7G
wgEncodeRikenCageSknshCellPapAlnRep4.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002763; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6692; labExpId=CThi10046; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCellPapAlnRep4; type=bai; md5sum=b1ba9fb0797167564cafcf3560763c8f; size=4.8M
wgEncodeRikenCageSknshCellPapMinusRawRep3.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002763; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6598; geoSampleAccession=GSM979646; labExpId=CThi10043; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCellPapMinusRawRep3; type=bigWig; md5sum=00abbedf7b3eef7b8afb48d5f7a02b52; size=31M
wgEncodeRikenCageSknshCellPapMinusRawRep4.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002763; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6632; geoSampleAccession=GSM979646; labExpId=CThi10046; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCellPapMinusRawRep4; type=bigWig; md5sum=738025f00849434c3c10e107e7d18b4c; size=28M
wgEncodeRikenCageSknshCellPapPlusRawRep3.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002763; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6598; geoSampleAccession=GSM979646; labExpId=CThi10043; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCellPapPlusRawRep3; type=bigWig; md5sum=a1f2226f7a17ed6d313fb29a0012994e; size=36M
wgEncodeRikenCageSknshCellPapPlusRawRep4.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002763; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6632; geoSampleAccession=GSM979646; labExpId=CThi10046; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCellPapPlusRawRep4; type=bigWig; md5sum=f5ec03882d8cd9cb223795fd742aff53; size=32M
wgEncodeRikenCageSknshCellPapRawDataRep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002763; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6437; geoSampleAccession=GSM979646; labExpId=CThi10043; bioRep=085WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=cb0927c3582e38f1c26fde7f99f4f9d5; size=3.1G
wgEncodeRikenCageSknshCellPapRawDataRep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002763; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6470; geoSampleAccession=GSM979646; labExpId=CThi10046; bioRep=086WC; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=a74cb3a0b4d4340baf2b5f18f3267437; size=2.7G
wgEncodeRikenCageSknshCellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=SK-N-SH; localization=cell; rnaExtract=longPolyA; readType=1x50; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002763; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6717; geoSampleAccession=GSM979646; labExpId=CThi10043,CThi10046; bioRep=085WC,086WC; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCellPapTssHmm; type=bedRnaElements; md5sum=bddbb755005f8023321aac770a03d6da; size=5.8M
wgEncodeRikenCageSknshCytosolPapAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002761; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6677; labExpId=CThi10044; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCytosolPapAlnRep3; type=bam; md5sum=546680e2c14240eae469fd0b54ffe65a; size=1.4G
wgEncodeRikenCageSknshCytosolPapAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002761; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6677; labExpId=CThi10044; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCytosolPapAlnRep3; type=bai; md5sum=b1ae519e91a76cd731ef0173b3b21d3e; size=4.4M
wgEncodeRikenCageSknshCytosolPapAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002761; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6652; labExpId=CThi10047; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCytosolPapAlnRep4; type=bam; md5sum=2246fe28882f890a8eeb799da4f27461; size=1.6G
wgEncodeRikenCageSknshCytosolPapAlnRep4.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002761; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6652; labExpId=CThi10047; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCytosolPapAlnRep4; type=bai; md5sum=8e48b3f650a647779cc5368f3acfb05a; size=4.3M
wgEncodeRikenCageSknshCytosolPapMinusRawRep3.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002761; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6615; geoSampleAccession=GSM979648; labExpId=CThi10044; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCytosolPapMinusRawRep3; type=bigWig; md5sum=c445e724eb436bae5eeeb527ff2e239f; size=26M
wgEncodeRikenCageSknshCytosolPapMinusRawRep4.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002761; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6590; geoSampleAccession=GSM979648; labExpId=CThi10047; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCytosolPapMinusRawRep4; type=bigWig; md5sum=947b8b462328a6f0876d9b052ee5c05a; size=26M
wgEncodeRikenCageSknshCytosolPapPlusRawRep3.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002761; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6615; geoSampleAccession=GSM979648; labExpId=CThi10044; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCytosolPapPlusRawRep3; type=bigWig; md5sum=844d0fea8302adb66f406df0f35f0cb1; size=25M
wgEncodeRikenCageSknshCytosolPapPlusRawRep4.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002761; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6590; geoSampleAccession=GSM979648; labExpId=CThi10047; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCytosolPapPlusRawRep4; type=bigWig; md5sum=1f8707a8f51ace83ff564bcc7945cdf6; size=25M
wgEncodeRikenCageSknshCytosolPapRawDataRep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002761; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6453; geoSampleAccession=GSM979648; labExpId=CThi10044; bioRep=085C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=e9ef5a17836cca98aa8fba2cb63e95bd; size=2.1G
wgEncodeRikenCageSknshCytosolPapRawDataRep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002761; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6429; geoSampleAccession=GSM979648; labExpId=CThi10047; bioRep=086C; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=76895e3e2960262ebb6ced908cad1955; size=2.7G
wgEncodeRikenCageSknshCytosolPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=SK-N-SH; localization=cytosol; rnaExtract=longPolyA; readType=1x50; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002761; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6734; geoSampleAccession=GSM979648; labExpId=CThi10044,CThi10047; bioRep=085C,086C; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshCytosolPapTssHmm; type=bedRnaElements; md5sum=ef26aeb224dab37910b554481158714c; size=4.7M
wgEncodeRikenCageSknshNucleusPapAlnRep3.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002762; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6675; labExpId=CThi10045; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshNucleusPapAlnRep3; type=bam; md5sum=13b0f544a005bfb6142984162c88a658; size=2.0G
wgEncodeRikenCageSknshNucleusPapAlnRep3.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002762; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6675; labExpId=CThi10045; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshNucleusPapAlnRep3; type=bai; md5sum=ebd59d8a52be4ede62a8f6307b783a04; size=5.6M
wgEncodeRikenCageSknshNucleusPapAlnRep4.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002762; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6661; labExpId=CThi10048; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshNucleusPapAlnRep4; type=bam; md5sum=4af03165898212fb069b0d437682e659; size=1.9G
wgEncodeRikenCageSknshNucleusPapAlnRep4.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002762; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6661; labExpId=CThi10048; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshNucleusPapAlnRep4; type=bai; md5sum=3083e871ff6f1e9c699168482d5d8d4e; size=5.5M
wgEncodeRikenCageSknshNucleusPapMinusRawRep3.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002762; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6613; geoSampleAccession=GSM979647; labExpId=CThi10045; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshNucleusPapMinusRawRep3; type=bigWig; md5sum=4aaf542b41cb9248b74d89fa2faf3b29; size=63M
wgEncodeRikenCageSknshNucleusPapMinusRawRep4.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002762; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6597; geoSampleAccession=GSM979647; labExpId=CThi10048; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshNucleusPapMinusRawRep4; type=bigWig; md5sum=2e2b660af8a977c608b509425132d753; size=55M
wgEncodeRikenCageSknshNucleusPapPlusRawRep3.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002762; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6613; geoSampleAccession=GSM979647; labExpId=CThi10045; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshNucleusPapPlusRawRep3; type=bigWig; md5sum=9c16360249d4a46bca6bce97cf955152; size=57M
wgEncodeRikenCageSknshNucleusPapPlusRawRep4.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002762; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6597; geoSampleAccession=GSM979647; labExpId=CThi10048; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshNucleusPapPlusRawRep4; type=bigWig; md5sum=08a0ba346c287ab6d809c5ab18c2b824; size=50M
wgEncodeRikenCageSknshNucleusPapRawDataRep3.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=3; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002762; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6451; geoSampleAccession=GSM979647; labExpId=CThi10045; bioRep=085N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=34f55979297e318b2273d16db8aa897b; size=3.1G
wgEncodeRikenCageSknshNucleusPapRawDataRep4.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=1x50; replicate=4; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002762; dateSubmitted=2012-03-28; dateUnrestricted=2012-12-28; subId=6438; geoSampleAccession=GSM979647; labExpId=CThi10048; bioRep=086N; seqPlatform=Illumina_HiSeq_2000; type=fastq; md5sum=8a87541d09f4b9fbd13e381469b57562; size=2.7G
wgEncodeRikenCageSknshNucleusPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=SK-N-SH; localization=nucleus; rnaExtract=longPolyA; readType=1x50; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH002762; dateSubmitted=2012-03-30; dateUnrestricted=2012-12-30; subId=6727; geoSampleAccession=GSM979647; labExpId=CThi10045,CThi10048; bioRep=085N,086N; seqPlatform=Illumina_HiSeq_2000; tableName=wgEncodeRikenCageSknshNucleusPapTssHmm; type=bedRnaElements; md5sum=146b4db17d96e77f46846daa198a0d4c; size=8.4M
wgEncodeRikenCageSknshraCellPapAlnRep1.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3423; labExpId=K14; bioRep=019WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageSknshraCellPapAlnRep1; type=bam; md5sum=dd157c5757c5e85f4c7854089a09bbf2; size=426M
wgEncodeRikenCageSknshraCellPapAlnRep1.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3423; labExpId=K14; bioRep=019WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageSknshraCellPapAlnRep1; type=bai; md5sum=deddd10a9ea249479aeb5a26a201c111; size=5.0M
wgEncodeRikenCageSknshraCellPapAlnRep2.bam	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3339; labExpId=K15; bioRep=020WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageSknshraCellPapAlnRep2; type=bam; md5sum=e0edada032843539e6d28574d4a0f766; size=367M
wgEncodeRikenCageSknshraCellPapAlnRep2.bam.bai	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=Alignments; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3339; labExpId=K15; bioRep=020WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageSknshraCellPapAlnRep2; type=bai; md5sum=e3148691af40a89746f4b3d7abc54707; size=4.8M
wgEncodeRikenCageSknshraCellPapMinusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-05-31; dateUnrestricted=2012-03-02; subId=4167; geoSampleAccession=GSM849362; labExpId=K14; bioRep=019WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageSknshraCellPapMinusRawRep1; type=bigWig; md5sum=c7d6b31c2be98961fbe5f56b1cdcdeff; size=11M
wgEncodeRikenCageSknshraCellPapMinusSignalRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=MinusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3339; geoSampleAccession=GSM849362; labExpId=K15; bioRep=020WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageSknshraCellPapMinusSignalRep2; type=bigWig; md5sum=49c53bb840d8c3f0b5f081f7f0e86ddc; size=63M
wgEncodeRikenCageSknshraCellPapPlusRawRep1.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-05-31; dateUnrestricted=2012-03-02; subId=4167; geoSampleAccession=GSM849362; labExpId=K14; bioRep=019WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageSknshraCellPapPlusRawRep1; type=bigWig; md5sum=aba33e70ca776b71c380a163f692c867; size=11M
wgEncodeRikenCageSknshraCellPapPlusSignalRep2.bigWig	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=PlusSignal; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3339; geoSampleAccession=GSM849362; labExpId=K15; bioRep=020WC; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageSknshraCellPapPlusSignalRep2; type=bigWig; md5sum=19083c96c5056b16a4345fb333e68b2a; size=65M
wgEncodeRikenCageSknshraCellPapRawDataRep1.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=1; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-01-20; dateUnrestricted=2011-10-20; subId=3423; geoSampleAccession=GSM849362; labExpId=K14; bioRep=019WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=aa505f281a58a7364a46d78534344add; size=513M
wgEncodeRikenCageSknshraCellPapRawDataRep2.fastq.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=RawData; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; replicate=2; dataVersion=ENCODE Jan 2011 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-01-19; dateUnrestricted=2011-10-19; subId=3339; geoSampleAccession=GSM849362; labExpId=K15; bioRep=020WC; seqPlatform=Illumina_GA2x; type=fastq; md5sum=5a506d27437e288f9672da2947864970; size=454M
wgEncodeRikenCageSknshraCellPapTssGencV7.gtf.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssGencV7; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2011-07-12; dateUnrestricted=2012-04-12; subId=4524; geoSampleAccession=GSM849362; labExpId=K14,K15; bioRep=019WC,020WC; seqPlatform=Illumina_GA2x; type=gtf; md5sum=8ad7deb793ed341deda73447d6d3e129; size=3.1M
wgEncodeRikenCageSknshraCellPapTssHmm.bedRnaElements.gz	project=wgEncode; grant=Gingeras; lab=RIKEN; composite=wgEncodeRikenCage; dataType=Cage; view=TssHmm; cell=SK-N-SH_RA; localization=cell; rnaExtract=longPolyA; dataVersion=ENCODE Mar 2012 Freeze; dccAccession=wgEncodeEH001157; dateSubmitted=2012-02-10; dateUnrestricted=2012-11-10; subId=5610; geoSampleAccession=GSM849362; labExpId=K14,K15; bioRep=019WC,020WC; labVersion=IDR; seqPlatform=Illumina_GA2x; tableName=wgEncodeRikenCageSknshraCellPapTssHmm; type=bedRnaElements; md5sum=74a76af62ea7f81ecbb2503d9b3e61c9; size=1.9M