This directory contains the assembled sequence for the June 2003 
update of the rat genome (rn3, Jun. 2003) in separate files for 
each chromosome in a zipped Fasta format. This assembly was 
provided by the Rat Genome Sequencing Consortium. It was produced 
at the Baylor College of Medicine. For more information on the rat 
genome, see the Rat Genome Project website for the Baylor College of 
Medicine Human Genome Sequencing Center at http://www.hgsc.bcm.tmc.edu/. 

Files included in this directory:

  - chr*.fa.zip: compressed FASTA sequence of each chromosome.
    Repeats from RepeatMasker and Tandem Repeats Finder (with period
    of 12 or less) are shown in lower case; non-repeating sequence is
    shown in upper case.

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If you plan to download a large file or multiple files from this 
directory, we recommend that you use ftp rather than downloading the 
files via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then 
go to the directory goldenPath/rnJun2003/chromosomes. To download 
multiple files, use the "mget" command:

    mget <filename1> <filename2> ...
    - or -
    mget -a (to download all the files in the directory)

These data are  made available before scientific publication with the
following understanding:
 
1. The data may be freely downloaded, used in analyses, and repackaged
   in databases.
2. Users are free to use the data in scientific papers analyzing
   particular genes and regions if the providers of this data (the Rat
   Genome Sequencing Consortium) are properly acknowledged.
3. The Centers producing the data reserve the right to publish the
   initial large-scale analyses of the dataset, including large-scale
   identification of regions of evolutionary conservation and large-scale
   genomic assembly. Large-scale refers to regions with size on the order
   of a chromosome (that is, 30 Mb or more). 
4. This is in accordance with, and with the understandings in the Fort
   Lauderdale meeting discussing Community Resource Projects (see
   http://www.wellcome.ac.uk/en/1/awtpubrepdat.html) and the resulting
   NHGRI policy statement
   (http://www.genome.gov/page.cfm?pageID=10506537).
5. Any redistribution of the data should carry this notice.

      Name                    Last modified      Size  Description
Parent Directory - chr1.fa.zip 2003-07-03 11:18 76M chr2.fa.zip 2003-07-03 11:21 74M chr4.fa.zip 2003-07-03 11:26 54M chr5.fa.zip 2003-07-03 11:28 50M chr3.fa.zip 2003-07-03 11:23 50M chrX.fa.zip 2003-07-03 11:35 45M chr6.fa.zip 2003-07-03 11:29 42M chr7.fa.zip 2003-07-03 11:31 41M chr8.fa.zip 2003-07-03 11:32 37M chr9.fa.zip 2003-07-03 11:34 33M chr13.fa.zip 2003-07-03 11:40 32M chr10.fa.zip 2003-07-03 11:37 32M chr14.fa.zip 2003-07-03 11:41 32M chr15.fa.zip 2003-07-03 11:42 31M chr17.fa.zip 2003-07-03 11:45 28M chr11.fa.zip 2003-07-03 11:38 26M chr16.fa.zip 2003-07-03 11:43 26M chr18.fa.zip 2003-07-03 11:46 25M chrUn.fa.zip 2003-07-03 11:48 17M chr19.fa.zip 2003-07-03 11:46 17M chr20.fa.zip 2003-07-03 11:47 16M chr12.fa.zip 2003-07-03 11:39 13M chrUn_random.fa.zip 2003-07-03 11:48 1.8M chr2_random.fa.zip 2003-07-03 11:36 1.2M chr1_random.fa.zip 2003-07-03 11:36 1.0M chr5_random.fa.zip 2003-07-03 11:36 570K chr4_random.fa.zip 2003-07-03 11:36 564K chr14_random.fa.zip 2003-07-03 11:48 495K chr6_random.fa.zip 2003-07-03 11:36 495K chrX_random.fa.zip 2003-07-03 11:36 489K chr3_random.fa.zip 2003-07-03 11:36 477K chr15_random.fa.zip 2003-07-03 11:48 446K chr16_random.fa.zip 2003-07-03 11:48 377K chr11_random.fa.zip 2003-07-03 11:48 370K chr7_random.fa.zip 2003-07-03 11:36 325K chr9_random.fa.zip 2003-07-03 11:36 316K chr19_random.fa.zip 2003-07-03 11:48 271K chr8_random.fa.zip 2003-07-03 11:36 243K chr10_random.fa.zip 2003-07-03 11:48 235K chr12_random.fa.zip 2003-07-03 11:48 216K chr20_random.fa.zip 2003-07-03 11:48 162K chr17_random.fa.zip 2003-07-03 11:48 160K chr18_random.fa.zip 2003-07-03 11:48 148K chr13_random.fa.zip 2003-07-03 11:48 145K conditions_for_use.txt 2003-07-03 08:36 1.0K