This directory contains compressed multiple alignments of the 
following assemblies to the mouse genome (mm6, Mar. 2005):

  - rat (rn3, Jun. 2003)
  - human (hg17, May 2004) 
  - dog (canFam2, May. 2005) 
  - cow (bosTau1, Sep. 2004) 
  - opossum (monDom1, Oct. 2004)
  - chicken (galGal2, Feb. 2004) 
  - frog (xenTro1, Oct. 2004) 
  - zebrafish (danRer3, May. 2005) 
  - Tetraodon (tetNig1, Feb. 2004) 

Files included in this directory:
  - chr*.maf.gz files: each contain all the alignments to that 
    particular mouse chromosome.  

For a description of multiple alignment format (MAF), see
http://genome.ucsc.edu/goldenPath/help/maf.html.

---------------------------------------------------------------
If you plan to download a large file or multiple files from this 
directory, we recommend that you use ftp rather than downloading the 
files via our website. To do so, ftp to hgdownload.cse.ucsc.edu, 
then go to the directory goldenPath/mm6/multiz10way. To download 
multiple files, use the "mget" command:

    mget <filename1> <filename2> ...
    - or -
    mget -a (to download all the files in the directory) 

All the files in this directory are freely usable for any 
purpose. For data use restrictions regarding the individual 
genome assemblies, see http://genome.ucsc.edu/goldenPath/credits.html.

      Name                    Last modified      Size  Description
Parent Directory - chr1.maf.gz 2005-12-05 19:50 196M chr1_random.maf.gz 2005-12-05 16:34 1.1M chr2.maf.gz 2005-12-05 20:05 202M chr3.maf.gz 2005-12-05 18:49 157M chr3_random.maf.gz 2005-12-05 16:35 2.9M chr4.maf.gz 2005-12-05 18:52 158M chr5.maf.gz 2005-12-05 18:36 149M chr5_random.maf.gz 2005-12-05 16:34 1.7M chr6.maf.gz 2005-12-05 18:37 151M chr6_random.maf.gz 2005-12-05 16:34 1.1M chr7.maf.gz 2005-12-05 18:17 134M chr7_random.maf.gz 2005-12-05 16:34 2.6M chr8.maf.gz 2005-12-05 18:10 129M chr8_random.maf.gz 2005-12-05 16:34 1.6M chr9.maf.gz 2005-12-05 18:18 133M chr9_random.maf.gz 2005-12-05 16:34 358K chr10.maf.gz 2005-12-05 18:17 133M chr10_random.maf.gz 2005-12-05 16:34 462K chr11.maf.gz 2005-12-05 18:27 137M chr12.maf.gz 2005-12-05 17:57 117M chr12_random.maf.gz 2005-12-05 16:35 2.7M chr13.maf.gz 2005-12-05 17:50 113M chr13_random.maf.gz 2005-12-05 16:35 3.0M chr14.maf.gz 2005-12-05 17:59 120M chr14_random.maf.gz 2005-12-05 16:34 1.4M chr15.maf.gz 2005-12-05 17:43 105M chr15_random.maf.gz 2005-12-05 16:34 778K chr16.maf.gz 2005-12-05 17:37 98M chr16_random.maf.gz 2005-12-05 16:34 1.4M chr17.maf.gz 2005-12-05 17:29 90M chr17_random.maf.gz 2005-12-05 16:34 1.2M chr18.maf.gz 2005-12-05 17:33 93M chr18_random.maf.gz 2005-12-05 16:34 744K chr19.maf.gz 2005-12-05 17:14 67M chr19_random.maf.gz 2005-12-05 16:34 631K chrM.maf.gz 2005-12-05 16:33 61K chrUn_random.maf.gz 2005-12-05 16:41 22M chrX.maf.gz 2005-12-05 18:00 124M chrY.maf.gz 2005-12-05 16:34 950K chrY_random.maf.gz 2005-12-05 16:36 12M