Markers vs. Genome Sequence Assembly

ctg16645 ctg19043 ctg14153 ctg17176 ctg12858 ctg16073 ctg17533 ctg13531 ctg17602 ctg15415 ctg16569 ctg14797 ctg17248 ctg15820 ctg18685 ctg17298 ctg15190 ctg15295 ctg15322 ctg18523 ctg16173 ctg15941 ctg15556 ctg15653 ctg16755 ctg17490