Markers vs. Genome Sequence Assembly

ctgX_BCM_1 ctgX_BCM_2 ctgX_BCM_3 ctgX_BCM_4 ctgX_BCM_5 ctgX_BCM_6 ctgX_BCM_7 ctgX_BCM_8 ctgX_BCM_9 ctgX_BCM_10 ctgX_BCM_11 ctgChr_Xctg40 ctgX_WUGSC_1 ctgX_WUGSC_2 ctgX_WUGSC_3 ctgX_WUGSC_4 ctgX_BCM_12 ctgX_BCM_13 ctgX_BCM_14 ctgX_BCM_15 ctgX_BCM_16 ctgX_BCM_17 ctgChr_Xctg171 ctgChr_Xctg198 ctgChr_Xctg26