Markers vs. Genome Sequence Assembly

ctgChr_1ctg1 ctgChr_1ctg2 ctgChr_1ctg3 ctgChr_1ctg4 ctgChr_1ctg7 ctgChr_1ctg8 ctgChr_1ctg9 ctgChr_1ctg13 ctgChr_1ctg15 ctgChr_1ctg18 ctgChr_1ctg20 ctgChr_1ctg25 ctgChr_1ctg27 ctgChr_1ctg30 ctgChr_1ctg31 ctgChr_1ctg34 ctgChr_1ctg50 ctgChr_1ctg52 ctgChr_1ctg70 ctgChr_1ctg71 ctgChr_1ctg72 ctgChr_1ctg73 ctgChr_1ctg75 ctgChr_1ctg76 ctgChr_1ctg78 ctgChr_1ctg82 ctgChr_1ctg88 ctgChr_1ctg92 ctgChr_1ctg95 ctgChr_1ctg98 ctgChr_1ctg102 ctgChr_1ctg104 ctgChr_1ctg109 ctgChr_1ctg110