Markers vs. Genome Sequence Assembly

ctg15544 ctg18484 ctg18466 ctg16182 ctg15053 ctg17140 ctg12823 ctg12425 ctg16820 ctg14945 ctg14946 ctg14943 ctg17465 ctg14933 ctg17655 ctg17652 ctg17939 ctg14932 ctg14947 ctg66 ctg14159 ctg15972 ctg15661 ctg12567 ctg18743 ctg17263 ctg15325 ctg18322 ctg17381 ctg17189