1934 139 17 0 chrX_random 501 802 -9298204 + AluSg SINE Alu 5 310 0 1306 293 128 29 chrX_random 1529 2811 -9296195 + L1M4 LINE L1 3528 4936 -1210 1533 230 31 53 chrX_random 2831 3435 -9295571 + L1ME1 LINE L1 4075 4665 -1481 1777 174 7 0 chrX_random 3443 3737 -9295269 + AluJo SINE Alu 1 296 -16 2409 202 34 37 chrX_random 3737 4178 -9294828 - MLT1E3 LTR MaLR -13 611 174 1291 207 67 69 chrX_random 4178 4569 -9294437 + MLT1B LTR MaLR 1 390 0 2409 202 34 37 chrX_random 4569 4702 -9294304 - MLT1E3 LTR MaLR -450 174 42 1289 229 80 36 chrX_random 4712 5166 -9293840 + L1ME1 LINE L1 5696 6163 -3 2150 110 3 0 chrX_random 7868 8175 -9290831 + AluSp SINE Alu 1 308 0 551 302 44 6 chrX_random 8178 8360 -9290646 - MIR SINE MIR -61 201 13 351 154 0 0 chrX_random 8377 8442 -9290564 + (TG)n Simple_repeat Simple_repeat 2 66 0 2430 38 0 0 chrX_random 8800 9090 -9289916 - L1PA5 LINE L1 0 6154 5865 190 319 0 0 chrX_random 9979 10026 -9288980 + L2 LINE L2 3262 3308 -5 588 323 99 44 chrX_random 10595 11031 -9287975 + LTR33 LTR ERVL 53 512 -9 2318 102 0 0 chrX_random 11276 11580 -9287426 + AluSg SINE Alu 1 304 -6 2085 171 47 28 chrX_random 11915 12460 -9286546 + MLT2A2 LTR ERVL 1 554 0 3507 243 9 1 chrX_random 12728 13677 -9285329 + L1 LINE L1 2925 3881 -2265 2823 97 12 5 chrX_random 13668 14090 -9284916 + L1P LINE L1 4883 5307 -839 * 243 0 0 0 chrX_random 14104 14131 -9284875 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 199 379 53 0 chrX_random 14213 14308 -9284698 - MIR SINE MIR -66 142 43 2527 124 3 0 chrX_random 14310 14672 -9284334 + L1PA15 LINE L1 5731 6093 -72 * 5957 99 10 14 chrX_random 14671 14685 -9284321 + L1PA10 LINE L1 5293 5306 -862 315 0 0 0 chrX_random 14685 14720 -9284286 + (CA)n Simple_repeat Simple_repeat 2 36 0 5957 99 10 14 chrX_random 14720 15580 -9283426 + L1PA10 LINE L1 5306 6164 -4 5777 215 11 8 chrX_random 15585 17400 -9281606 + L1PA16 LINE L1 3883 5700 -466 1602 180 220 0 chrX_random 17400 17745 -9281261 - MSTB LTR MaLR -2 424 4 7467 200 74 8 chrX_random 17748 19294 -9279712 - MSTB-int LTR MaLR 0 1651 3 1246 174 14 5 chrX_random 19296 19644 -9279362 - MSTB LTR MaLR 0 426 1 1662 142 121 8 chrX_random 19646 20031 -9278975 + L1PA16 LINE L1 5696 6165 -1 4533 163 22 27 chrX_random 20124 21014 -9277992 - L1MC1 LINE L1 -3 6330 5445 7422 96 7 19 chrX_random 22037 23107 -9275899 + MER11C LTR ERVK 1 1057 -14 1771 229 5 16 chrX_random 23641 23909 -9275097 + MER44D DNA MER2_type 8 272 -2215 2115 175 31 126 chrX_random 23909 24584 -9274422 + LTR9 LTR ERV1 2 612 0 1771 229 5 16 chrX_random 24584 24687 -9274319 + MER44D DNA MER2_type 272 375 -2112 1712 188 10 0 chrX_random 24688 24992 -9274014 + MER44D DNA MER2_type 427 605 0 1208 121 44 10 chrX_random 25920 26126 -9272880 + L1PA11 LINE L1 5955 6167 -7 313 179 90 13 chrX_random 27105 27183 -9271823 - L2 LINE L2 -2 3311 3228 876 147 56 0 chrX_random 28083 28226 -9270780 + MER2 DNA MER2_type 1 151 -194 5332 135 113 73 chrX_random 28228 28777 -9270229 - Tigger3b DNA MER2_type -1798 1230 705 1545 160 27 43 chrX_random 28777 28905 -9270101 - L1MA3 LINE L1 -1 6304 6175 1945 107 8 0 chrX_random 28905 29167 -9269839 - AluY SINE Alu -10 301 38 1545 160 27 43 chrX_random 29167 29406 -9269600 - L1MA3 LINE L1 -130 6175 5943 5332 135 113 73 chrX_random 29406 30037 -9268969 - Tigger3b DNA MER2_type -2323 705 2 1062 141 54 0 chrX_random 30038 30223 -9268783 + MER2 DNA MER2_type 151 345 0 36 0 0 0 chrX_random 30605 30641 -9268365 + AT_rich Low_complexity Low_complexity 1 36 0 564 246 46 29 chrX_random 30996 31171 -9267835 + MER5B DNA MER1_type 1 178 0 1799 96 0 0 chrX_random 31658 31907 -9267099 + L1PA13 LINE L1 5815 6063 -100 854 71 0 0 chrX_random 31964 32076 -9266930 + L1PA13 LINE L1 6047 6158 -5 200 308 86 26 chrX_random 33158 33275 -9265731 - L2 LINE L2 -230 3042 2919 184 250 125 19 chrX_random 33417 33521 -9265485 - L2 LINE L2 -603 2711 2597 385 340 26 41 chrX_random 33575 33769 -9265237 + MIR3 SINE MIR 16 206 -2 733 311 18 0 chrX_random 35344 35566 -9263440 + LTR16A LTR ERVL 219 444 -6 2274 108 0 0 chrX_random 35986 36292 -9262714 + AluSq SINE Alu 1 306 -7 717 243 25 20 chrX_random 36347 36549 -9262457 + L2 LINE L2 3111 3313 0 1498 191 25 3 chrX_random 36781 37063 -9261943 - MER65A LTR ERV1 -117 328 41 2428 126 0 5 chrX_random 37068 37442 -9261564 - L1PA15 LINE L1 0 6165 5794 504 307 20 5 chrX_random 37462 37664 -9261342 - HAL1 LINE L1 -604 1903 1699 249 165 177 13 chrX_random 37736 37815 -9261191 + MER92B LTR ERV1 541 632 -4 257 296 37 0 chrX_random 38313 38394 -9260612 + LTR67 LTR ERVL 439 522 -35 1493 256 194 57 chrX_random 38920 39186 -9259820 + L1M4 LINE L1 67 295 -6247 2154 96 51 0 chrX_random 39186 39479 -9259527 + AluSp SINE Alu 4 311 -2 1493 256 194 57 chrX_random 39479 40092 -9258914 + L1M4 LINE L1 295 1067 -5475 21032 158 12 33 chrX_random 40464 45496 -9253510 - L1PA11 LINE L1 0 6174 1257 2829 56 0 5 chrX_random 45934 46324 -9252682 - L1P LINE L1 -2716 3430 3043 15240 35 4 11 chrX_random 46324 48940 -9250066 + L1PA5 LINE L1 3548 6153 -1 1132 334 39 9 chrX_random 50081 50518 -9248488 + LTR33 LTR ERVL 70 519 -2 1537 335 72 51 chrX_random 50791 52419 -9246587 - HERV16 LTR ERVL -591 5063 3402 1084 290 116 45 chrX_random 52810 53065 -9245941 - HERV16 LTR ERVL -4349 647 412 2303 100 3 0 chrX_random 53065 53374 -9245632 + AluSq SINE Alu 1 310 -3 1084 290 116 45 chrX_random 53374 53722 -9245284 - HERV16 LTR ERVL -4584 412 1 818 322 39 34 chrX_random 53722 54159 -9244847 - LTR16A LTR ERVL 0 457 1 331 257 170 23 chrX_random 54563 54734 -9244272 - MLT1L LTR MaLR -5 610 415 237 139 0 0 chrX_random 54850 54893 -9244113 + (GA)n Simple_repeat Simple_repeat 1 43 0 235 306 24 12 chrX_random 54954 55039 -9243967 - MLT1L LTR MaLR -340 275 190 500 90 26 0 chrX_random 55041 55119 -9243887 - MADE1 DNA Mariner 0 80 1 32 0 0 0 chrX_random 55396 55428 -9243578 + AT_rich Low_complexity Low_complexity 1 32 0 24 0 0 0 chrX_random 55978 56002 -9243004 + AT_rich Low_complexity Low_complexity 1 24 0 1241 145 5 0 chrX_random 57075 57275 -9241731 + Tigger7 DNA MER2_type 2387 2587 0 232 353 35 17 chrX_random 57395 57511 -9241495 + MIR3 SINE MIR 76 193 -15 11407 198 17 2 chrX_random 58144 60164 -9238842 + L1PA13 LINE L1 2 2052 -4735 393 22 0 0 chrX_random 60958 61004 -9238002 + (CA)n Simple_repeat Simple_repeat 2 47 0 199 378 12 54 chrX_random 61207 61448 -9237558 - L2 LINE L2 -563 2751 2521 183 361 44 27 chrX_random 61861 62044 -9236962 - L2 LINE L2 -1309 2005 1820 365 203 68 116 chrX_random 62646 62834 -9236172 - MLT1J2 LTR MaLR -227 182 5 332 300 77 23 chrX_random 64196 64326 -9234680 - MLT1J2 LTR MaLR -44 406 270 1273 263 64 15 chrX_random 64328 64720 -9234286 - LTR52 LTR ERVL -2 419 9 245 295 37 104 chrX_random 64730 64971 -9234035 - MLT1J2 LTR MaLR -214 236 12 222 191 0 0 chrX_random 65409 65456 -9233550 + (TGAA)n Simple_repeat Simple_repeat 1 47 0 187 294 83 55 chrX_random 65559 65668 -9233338 + MIR SINE MIR 19 130 -78 1469 138 0 65 chrX_random 66682 66942 -9232064 + AluSx SINE Alu 3 245 -67 237 65 0 0 chrX_random 66942 66973 -9232033 + (CA)n Simple_repeat Simple_repeat 2 32 0 542 272 68 12 chrX_random 67510 67672 -9231334 - MER69A DNA AcHobo 0 177 7 355 209 23 12 chrX_random 68846 68932 -9230074 - LTR40a LTR ERVL -429 90 4 21 89 0 0 chrX_random 68998 69054 -9229952 + AT_rich Low_complexity Low_complexity 1 56 0 1154 248 74 54 chrX_random 69054 69342 -9229664 - L1ME2 LINE L1 -6 6158 5854 1960 85 56 4 chrX_random 69342 69632 -9229374 - AluSg SINE Alu 0 304 1 1154 248 74 54 chrX_random 69632 69826 -9229180 - L1ME2 LINE L1 -310 5854 5665 297 296 11 0 chrX_random 69918 70006 -9229000 + L1MC/D LINE L1 5507 5595 -2213 2282 94 3 3 chrX_random 70111 70418 -9228588 + AluSq SINE Alu 1 307 -6 349 318 92 24 chrX_random 70432 70856 -9228150 + L1M4 LINE L1 4723 5175 -971 269 301 57 42 chrX_random 70917 71219 -9227787 + L1M4 LINE L1 5255 5558 -612 297 263 0 0 chrX_random 71223 71303 -9227703 - MLT1J LTR MaLR -13 498 419 331 237 237 0 chrX_random 71347 71482 -9227524 - MLT1J LTR MaLR -243 268 102 306 292 110 30 chrX_random 71497 71733 -9227273 + L1M4 LINE L1 5551 5805 -373 2309 93 0 0 chrX_random 72075 72377 -9226629 + AluY SINE Alu 1 302 -9 183 42 0 0 chrX_random 73955 73979 -9225027 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 13947 175 61 38 chrX_random 74450 77971 -9221035 - L1 LINE L1 -921 6644 2942 2293 98 3 0 chrX_random 77971 78266 -9220740 - AluSq SINE Alu -15 298 3 13947 175 61 38 chrX_random 78266 80124 -9218882 - L1 LINE L1 -4623 2942 1130 31 0 0 0 chrX_random 80302 80333 -9218673 + AT_rich Low_complexity Low_complexity 1 31 0 577 338 92 33 chrX_random 80351 80777 -9218229 + L1ME LINE L1 5297 5747 -374 21 0 0 0 chrX_random 83381 83402 -9215604 + AT_rich Low_complexity Low_complexity 1 21 0 2074 243 23 27 chrX_random 84877 85400 -9213606 + MLT1F LTR MaLR 3 523 -19 1752 235 15 41 chrX_random 87982 88513 -9210493 + L1M4 LINE L1 4458 4974 -1172 467 142 225 17 chrX_random 88535 88655 -9210351 - L1MB4 LINE L1 -7 6173 6029 1864 171 60 46 chrX_random 88663 89097 -9209909 - MSTB2 LTR MaLR 0 457 18 1091 205 23 8 chrX_random 89097 89356 -9209650 - L1MB5 LINE L1 -152 6022 5760 * 6180 89 6 0 chrX_random 89342 90175 -9208831 - L1PA11 LINE L1 0 6174 5337 3053 166 34 0 chrX_random 90169 90736 -9208270 + L1PA11 LINE L1 4738 5323 -823 * 2247 184 37 7 chrX_random 90748 91335 -9207671 - L1MB5 LINE L1 -399 5775 5173 869 293 105 15 chrX_random 91430 91839 -9207167 - MLT1J2 LTR MaLR -4 446 1 1377 188 56 59 chrX_random 91963 92319 -9206687 + MLT1B LTR MaLR 1 355 -35 5372 107 22 11 chrX_random 93722 94108 -9204898 - L1PA15 LINE L1 0 6165 5785 1556 77 0 0 chrX_random 94108 94303 -9204703 - AluY SINE Alu -12 299 105 5372 107 22 11 chrX_random 94303 94830 -9204176 - L1PA15 LINE L1 -380 5785 5266 1802 113 4 8 chrX_random 94830 95087 -9203919 + AluSx SINE Alu 43 298 -14 5372 107 22 11 chrX_random 95087 96032 -9202974 - L1PA15 LINE L1 -899 5266 4279 23 0 0 0 chrX_random 96483 96506 -9202500 + AT_rich Low_complexity Low_complexity 1 23 0 244 191 21 0 chrX_random 97496 97543 -9201463 - MIR SINE MIR -147 115 68 14394 139 23 9 chrX_random 97603 99989 -9199017 - Tigger1 DNA MER2_type 0 2418 1 4437 204 57 25 chrX_random 100220 100919 -9198087 - L1MB3 LINE L1 -2 6181 5506 180 0 0 0 chrX_random 100919 100939 -9198067 + (TTG)n Simple_repeat Simple_repeat 2 21 0 4437 204 57 25 chrX_random 100939 101688 -9197318 - L1MB3 LINE L1 -677 5506 4656 2191 102 0 0 chrX_random 101688 101972 -9197034 - AluSg SINE Alu -26 284 1 4437 204 57 25 chrX_random 101972 102482 -9196524 - L1MB3 LINE L1 -1527 4656 4164 2107 106 0 3 chrX_random 102573 102879 -9196127 - AluSx SINE Alu 0 305 1 990 227 22 123 chrX_random 103005 103411 -9195595 + MLT1A1 LTR MaLR 1 365 0 533 218 0 0 chrX_random 103429 103530 -9195476 + Tigger3b DNA MER2_type 2 102 -1129 * 5137 126 61 24 chrX_random 103528 104020 -9194986 + Tigger3b DNA MER2_type 274 746 -2282 2422 84 0 0 chrX_random 104020 104319 -9194687 - AluY SINE Alu -12 299 1 5137 126 61 24 chrX_random 104319 104749 -9194257 + Tigger3b DNA MER2_type 746 1230 -1 1346 219 67 35 chrX_random 104805 105207 -9193799 - LTR52 LTR ERVL -2 419 5 1302 228 13 10 chrX_random 105214 105517 -9193489 - L1ME LINE L1 -407 5763 5460 1917 156 98 43 chrX_random 105565 105963 -9193043 + MSTA LTR MaLR 9 428 0 23 33 0 0 chrX_random 106062 106092 -9192914 + AT_rich Low_complexity Low_complexity 1 30 0 2161 122 6 3 chrX_random 106152 106463 -9192543 - AluSx SINE Alu 0 312 1 249 258 52 58 chrX_random 107817 107972 -9191034 + LTR31 LTR ERV1 437 590 -29 6429 17 9 0 chrX_random 107979 108731 -9190275 + L1P LINE L1 3935 4693 -1453 1291 182 12 104 chrX_random 108824 109170 -9189836 + MER67D LTR ERV1 1 314 -200 393 128 13 39 chrX_random 109220 109298 -9189708 + MER67D LTR ERV1 308 383 -131 1663 226 42 24 chrX_random 109641 110076 -9188930 - MER89 LTR ERV1 0 559 18 878 134 31 68 chrX_random 111223 111502 -9187504 - L1P LINE L1 -737 5429 5164 1995 141 23 0 chrX_random 111505 111869 -9187137 + L1PA11 LINE L1 5417 5827 -347 192 339 16 40 chrX_random 112772 112896 -9186110 - MIR SINE MIR -31 231 111 229 260 20 0 chrX_random 113017 113067 -9185939 - MIR SINE MIR -146 116 66 594 333 67 21 chrX_random 113127 113457 -9185549 + L1ME1 LINE L1 58 402 -5994 728 304 58 18 chrX_random 113535 113983 -9185023 + L1ME1 LINE L1 593 1058 -5338 1254 254 81 10 chrX_random 114051 114210 -9184796 + L1ME1 LINE L1 2287 2433 -3782 2308 166 18 23 chrX_random 114210 114645 -9184361 + Tigger2a DNA MER2_type 1 433 -1 1254 254 81 10 chrX_random 114645 114992 -9184014 + L1ME1 LINE L1 2433 2829 -3386 1840 247 63 13 chrX_random 115071 116007 -9182999 + L1ME1 LINE L1 5062 6211 -24 2442 119 19 3 chrX_random 116007 116376 -9182630 - THE1C LTR MaLR 0 375 1 10984 104 11 12 chrX_random 116378 117958 -9181048 - THE1C-int LTR MaLR -2 1578 1 2148 128 30 35 chrX_random 117958 118324 -9180682 - THE1B LTR MaLR 0 364 1 1831 93 69 7 chrX_random 118328 118619 -9180387 - THE1C-int LTR MaLR -1270 310 2 2358 136 22 3 chrX_random 118620 118988 -9180018 - THE1C LTR MaLR 0 375 1 551 267 141 0 chrX_random 119062 119253 -9179753 + MIR SINE MIR 32 249 -13 21 36 0 0 chrX_random 119676 119704 -9179302 + AT_rich Low_complexity Low_complexity 1 28 0 204 200 0 0 chrX_random 119820 119860 -9179146 + C-rich Low_complexity Low_complexity 3 42 0 441 116 0 0 chrX_random 121223 121292 -9177714 + (TG)n Simple_repeat Simple_repeat 2 70 0 23 0 0 0 chrX_random 121411 121434 -9177572 + AT_rich Low_complexity Low_complexity 1 23 0 509 261 37 18 chrX_random 121492 121710 -9177296 - L1MEc LINE L1 -3065 3150 2929 22 56 0 0 chrX_random 121777 121813 -9177193 + AT_rich Low_complexity Low_complexity 1 36 0 387 281 74 0 chrX_random 122367 122488 -9176518 + L1MC3 LINE L1 5516 5645 -521 1082 222 70 28 chrX_random 122488 122694 -9176312 - L1M4 LINE L1 -659 5525 5329 2133 142 3 0 chrX_random 122694 123004 -9176002 + AluSx SINE Alu 1 311 -1 1082 222 70 28 chrX_random 123004 123290 -9175716 - L1M4 LINE L1 -855 5329 5004 2293 237 74 33 chrX_random 123293 124073 -9174933 - L1MC3 LINE L1 -925 6860 6049 921 258 13 55 chrX_random 124066 124441 -9174565 - L1MCb LINE L1 -5727 318 3 * 317 321 68 9 chrX_random 124550 124703 -9174303 - L1MEc LINE L1 -4420 1976 1805 963 129 0 0 chrX_random 124703 124858 -9174148 + (TA)n Simple_repeat Simple_repeat 1 155 0 317 321 68 9 chrX_random 124858 124925 -9174081 - L1MEc LINE L1 -4591 1805 1743 638 275 52 62 chrX_random 124937 125340 -9173666 - L1MEc LINE L1 -4422 2141 1743 739 250 48 0 chrX_random 125479 125687 -9173319 - L1MEc LINE L1 -4874 1510 1293 805 245 21 19 chrX_random 125687 126029 -9172977 - MLT1D LTR MaLR 0 624 263 997 302 29 39 chrX_random 126042 126556 -9172450 + L1MC3 LINE L1 5845 6353 -1432 2675 84 3 19 chrX_random 126569 126938 -9172068 + THE1B LTR MaLR 2 364 0 2492 165 19 17 chrX_random 126938 127356 -9171650 + MSTB LTR MaLR 8 426 0 3977 252 34 50 chrX_random 127369 127962 -9171044 + L1MC4a LINE L1 6390 6991 -817 1492 235 49 64 chrX_random 127962 128490 -9170516 + MLT2B1 LTR ERVL 1 520 0 3977 252 34 50 chrX_random 128490 129338 -9169668 + L1MC4a LINE L1 6991 7808 0 19143 49 53 3 chrX_random 129364 131825 -9167181 + L1P LINE L1 1 2583 -3563 24 32 0 0 chrX_random 132228 132259 -9166747 + AT_rich Low_complexity Low_complexity 1 31 0 243 291 68 39 chrX_random 132474 132577 -9166429 + MIR SINE MIR 23 128 -80 33 43 0 0 chrX_random 133763 133810 -9165196 + AT_rich Low_complexity Low_complexity 1 47 0 22275 112 37 26 chrX_random 134304 137980 -9161026 + LOR1b-int LTR ERV1 1737 5456 -2664 2337 88 0 3 chrX_random 137980 138286 -9160720 + AluY SINE Alu 1 305 -6 22275 112 37 26 chrX_random 138286 138356 -9160650 + LOR1b-int LTR ERV1 5456 5524 -2596 1871 90 4 0 chrX_random 138355 138610 -9160396 + LOR1b-int LTR ERV1 5809 6064 -2056 * 614 88 11 11 chrX_random 138609 138700 -9160306 + LOR1b-int LTR ERV1 8030 8120 0 * 2483 181 7 13 chrX_random 138700 139164 -9159842 + LOR1b LTR ERV1 1 461 0 749 290 16 0 chrX_random 139170 139356 -9159650 + MER5A DNA MER1_type 1 189 0 2950 162 2 6 chrX_random 139897 140396 -9158610 - LOR1a LTR ERV1 0 497 1 389 264 152 0 chrX_random 140555 140680 -9158326 - MIR SINE MIR -73 189 46 446 322 96 14 chrX_random 140933 141141 -9157865 + MER20B DNA MER1_type 1 225 -558 34 24 0 0 chrX_random 141346 141387 -9157619 + AT_rich Low_complexity Low_complexity 1 41 0 590 269 42 0 chrX_random 142444 142611 -9156395 - MER5B DNA MER1_type -4 174 1 367 179 24 24 chrX_random 142776 142899 -9156107 + CT-rich Low_complexity Low_complexity 3 125 0 216 303 40 71 chrX_random 142947 143046 -9155960 - L2 LINE L2 -44 3228 3133 228 67 0 0 chrX_random 143947 143977 -9155029 + (TA)n Simple_repeat Simple_repeat 2 31 0 734 130 27 14 chrX_random 144007 144153 -9154853 - L1MA4A LINE L1 -11 6292 6145 812 148 13 13 chrX_random 144606 144761 -9154245 + L1MD3 LINE L1 7819 7973 -22 * 1395 184 24 0 chrX_random 144749 144918 -9154088 - L1P LINE L1 -796 5350 5170 339 25 0 0 chrX_random 144918 144958 -9154048 + (TTTTG)n Simple_repeat Simple_repeat 1 40 0 1395 184 24 0 chrX_random 144958 145082 -9153924 - L1P LINE L1 -976 5170 5050 * 4295 148 29 26 chrX_random 145080 145840 -9153166 + L1PA14 LINE L1 5355 6119 -42 2045 121 10 3 chrX_random 145840 146138 -9152868 + AluSx SINE Alu 1 300 -12 4295 148 29 26 chrX_random 146138 146176 -9152830 + L1PA14 LINE L1 6119 6155 -6 200 254 119 0 chrX_random 146238 146297 -9152709 + L2 LINE L2 3244 3309 -4 24 0 0 0 chrX_random 146302 146326 -9152680 + AT_rich Low_complexity Low_complexity 1 24 0 345 350 129 14 chrX_random 146470 146687 -9152319 + MIR SINE MIR 15 256 -6 249 33 0 0 chrX_random 146931 146961 -9152045 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 324 275 33 0 chrX_random 146974 147065 -9151941 - L2 LINE L2 -25 3247 3154 1501 195 9 58 chrX_random 147083 147431 -9151575 + MLT1B LTR MaLR 12 342 -48 244 342 33 53 chrX_random 147474 147626 -9151380 - MER5A DNA MER1_type -30 159 11 531 244 63 0 chrX_random 147657 147784 -9151222 - MER105 DNA DNA -62 142 8 181 402 21 0 chrX_random 147865 147962 -9151044 + MIR SINE MIR 47 145 -63 217 275 69 46 chrX_random 148003 148134 -9150872 + MIR SINE MIR 129 262 0 1409 176 40 31 chrX_random 148725 149048 -9149958 - MLT2D LTR ERVL -6 408 83 969 278 96 11 chrX_random 149226 149582 -9149424 - L2 LINE L2 -1076 2238 1853 573 158 0 0 chrX_random 149624 149725 -9149281 + (TA)n Simple_repeat Simple_repeat 2 102 0 1386 186 53 3 chrX_random 149725 150010 -9148996 - L1MC1 LINE L1 -7 6326 6028 1248 146 113 77 chrX_random 150221 150351 -9148655 + MSTA LTR MaLR 3 127 -301 2354 83 0 7 chrX_random 150351 150653 -9148353 + AluY SINE Alu 1 300 -11 1248 146 113 77 chrX_random 150653 150873 -9148133 + MSTA LTR MaLR 127 428 0 253 155 17 35 chrX_random 151197 151255 -9147751 - MER52C LTR ERV1 0 1278 1222 * 5225 197 104 84 chrX_random 151250 152684 -9146322 - MER52A LTR ERV1 -243 1512 50 330 376 17 17 chrX_random 153703 153881 -9145125 + MIR SINE MIR 20 197 -65 1003 249 84 9 chrX_random 155221 155566 -9143440 - L1MC4 LINE L1 -589 7453 7083 198 0 0 0 chrX_random 155910 155932 -9143074 + (CAAAA)n Simple_repeat Simple_repeat 5 26 0 2322 109 27 38 chrX_random 156059 156427 -9142579 + THE1B LTR MaLR 1 364 0 3454 192 50 81 chrX_random 157068 158205 -9140801 - L1MA10 LINE L1 -12 6322 5221 533 278 127 6 chrX_random 158213 158544 -9140462 + L1ME1 LINE L1 884 1254 -5142 21 71 0 0 chrX_random 158628 158670 -9140336 + AT_rich Low_complexity Low_complexity 1 42 0 5457 238 26 63 chrX_random 158742 160971 -9138035 + L1P3 LINE L1 5 2167 -4294 1839 91 15 0 chrX_random 160968 161242 -9137764 - L1P LINE L1 -781 5365 5088 * 4894 144 13 20 chrX_random 161239 162306 -9136700 + L1MD2 LINE L1 4352 5663 -579 513 253 90 13 chrX_random 162406 162705 -9136301 + L1MD2 LINE L1 5967 6337 -22 560 241 7 7 chrX_random 162746 162887 -9136119 + L1ME1 LINE L1 2731 2871 -3344 * 2187 250 84 33 chrX_random 162881 162947 -9136059 + L1ME1 LINE L1 4788 4849 -1386 393 39 0 0 chrX_random 162947 162998 -9136008 + (TAGA)n Simple_repeat Simple_repeat 3 53 0 2187 250 84 33 chrX_random 162998 164303 -9134703 + L1ME1 LINE L1 4849 6230 -5 284 317 0 73 chrX_random 166089 166212 -9132794 - L2 LINE L2 -8 3264 3151 458 332 78 17 chrX_random 166266 166498 -9132508 - MIR SINE MIR -4 258 13 2273 102 0 0 chrX_random 168830 169123 -9129883 - AluSx SINE Alu -19 293 1 30 27 0 0 chrX_random 169518 169555 -9129451 + AT_rich Low_complexity Low_complexity 1 37 0 210 164 0 0 chrX_random 170384 170439 -9128567 + (TA)n Simple_repeat Simple_repeat 2 56 0 448 220 13 6 chrX_random 170489 170648 -9128358 + CT-rich Low_complexity Low_complexity 1 160 0 211 349 95 16 chrX_random 170935 171061 -9127945 - L2 LINE L2 -189 3083 2948 401 339 48 16 chrX_random 171929 172118 -9126888 - MIR3 SINE MIR -6 202 8 307 299 155 17 chrX_random 172825 172999 -9126007 + MIR SINE MIR 41 238 -24 6382 201 27 1 chrX_random 174174 175609 -9123397 - L1 LINE L1 -1627 5479 4008 1786 296 62 91 chrX_random 175605 175756 -9123250 - L1P LINE L1 -2116 4030 3876 * 378 0 0 0 chrX_random 175756 175798 -9123208 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 1786 296 62 91 chrX_random 175798 175904 -9123102 - L1P LINE L1 -2270 3876 3768 332 143 0 0 chrX_random 175904 175960 -9123046 + Alu SINE Alu 245 300 -1 1786 296 62 91 chrX_random 175960 175977 -9123029 - L1P LINE L1 -2378 3768 3752 1211 111 5 11 chrX_random 175977 176166 -9122840 + L1PB1 LINE L1 5961 6148 -3 1786 296 62 91 chrX_random 176166 176374 -9122632 - L1P LINE L1 -2394 3752 3513 264 100 0 0 chrX_random 176374 176414 -9122592 + (TG)n Simple_repeat Simple_repeat 1 40 0 1786 296 62 91 chrX_random 176414 176556 -9122450 - L1P LINE L1 -2633 3513 3368 776 207 28 59 chrX_random 176536 176826 -9122180 - L1 LINE L1 -3086 4020 3740 * 1676 213 9 21 chrX_random 176832 176862 -9122144 - MLT2B3 LTR ERVL -12 542 513 617 38 12 0 chrX_random 176862 176942 -9122064 + (TAGA)n Simple_repeat Simple_repeat 4 84 0 1676 213 9 21 chrX_random 176942 177249 -9121757 - MLT2B3 LTR ERVL -41 513 209 7558 26 0 1 chrX_random 177249 178356 -9120650 + L1PA3 LINE L1 5066 6171 0 1886 298 28 16 chrX_random 178403 179095 -9119911 - L1 LINE L1 -6313 717 18 11724 90 27 17 chrX_random 179433 182435 -9116571 - MER61A-int LTR ERV1 -260 4957 1847 1253 106 41 6 chrX_random 182454 182701 -9116305 - MER61A-int LTR ERV1 -3596 1621 1320 * 1972 138 15 35 chrX_random 182694 183308 -9115698 - MER61A-int LTR ERV1 -4440 777 1 851 157 6 50 chrX_random 183308 183467 -9115539 - MER61A LTR ERV1 0 343 192 215 339 40 52 chrX_random 183770 183944 -9115062 - MIR SINE MIR -42 220 49 25 0 0 0 chrX_random 184044 184069 -9114937 + AT_rich Low_complexity Low_complexity 1 25 0 233 287 57 101 chrX_random 184567 184842 -9114164 - L1M4 LINE L1 -3403 2743 2480 378 0 0 0 chrX_random 184842 184884 -9114122 + (TG)n Simple_repeat Simple_repeat 1 42 0 233 287 57 101 chrX_random 184884 184904 -9114102 - L1M4 LINE L1 -3666 2480 2461 231 139 0 0 chrX_random 185865 185908 -9113098 + L1MA4A LINE L1 6244 6286 -17 469 150 0 0 chrX_random 185913 185993 -9113013 + L1MA4A LINE L1 6197 6276 -27 668 167 160 0 chrX_random 186016 186166 -9112840 - L1MA4 LINE L1 -103 6197 6024 3879 205 44 8 chrX_random 186756 187777 -9111229 - L1MB5 LINE L1 -9 6663 5606 3491 248 72 39 chrX_random 187773 189796 -9109210 - L1MB5 LINE L1 -4549 2097 3 * 2850 163 88 60 chrX_random 190317 191407 -9107599 + L1MA8 LINE L1 4675 5779 -512 265 47 47 0 chrX_random 191407 191450 -9107556 + (TA)n Simple_repeat Simple_repeat 1 45 0 2130 119 50 30 chrX_random 191450 191811 -9107195 - THE1C LTR MaLR -5 370 3 9137 120 57 39 chrX_random 191814 193367 -9105639 - THE1C-int LTR MaLR 0 1580 1 2038 130 50 19 chrX_random 193369 193731 -9105275 - THE1C LTR MaLR -2 373 1 2214 147 37 59 chrX_random 193733 194242 -9104764 + L1MA8 LINE L1 5787 6284 -7 5864 101 12 9 chrX_random 194349 194407 -9104599 + L1PA12 LINE L1 5308 5364 -804 2456 84 3 0 chrX_random 194407 194715 -9104291 + AluSp SINE Alu 1 309 -4 5864 101 12 9 chrX_random 194715 195514 -9103492 + L1PA12 LINE L1 5364 6167 -1 508 269 54 12 chrX_random 196500 196667 -9102339 + MER5B DNA MER1_type 4 177 -1 262 342 0 0 chrX_random 198392 198471 -9100535 - MIR SINE MIR -76 132 54 241 344 45 32 chrX_random 198548 198702 -9100304 - MER5A DNA MER1_type 0 189 34 1013 173 20 25 chrX_random 198919 199121 -9099885 + L1M2 LINE L1 5450 5650 -662 260 246 0 0 chrX_random 199126 199187 -9099819 - MER6 DNA MER2_type -13 852 792 743 183 22 15 chrX_random 200655 200792 -9098214 + MER5A DNA MER1_type 1 138 -51 225 0 0 0 chrX_random 200803 200828 -9098178 + (TG)n Simple_repeat Simple_repeat 1 25 0 1694 216 46 22 chrX_random 200832 201285 -9097721 - L1MD3 LINE L1 -126 7869 7406 312 179 0 51 chrX_random 201287 201365 -9097641 - MLT1F1 LTR MaLR -445 122 49 310 186 8 97 chrX_random 201377 201501 -9097505 - L1MC3 LINE L1 -691 7094 6982 1138 191 28 26 chrX_random 201626 201933 -9097073 - L1MA9 LINE L1 -55 6129 5816 * 4376 175 70 152 chrX_random 201921 202424 -9096582 - L1MA9 LINE L1 -1014 5132 4589 392 172 0 0 chrX_random 202424 202488 -9096518 - FLAM_A SINE Alu -7 126 63 4376 175 70 152 chrX_random 202488 202761 -9096245 - L1MA9 LINE L1 -1557 4589 4295 800 159 0 8 chrX_random 202761 202887 -9096119 - FLAM_C SINE Alu -18 125 1 4376 175 70 152 chrX_random 202887 203788 -9095218 - L1MA9 LINE L1 -1851 4295 3420 4104 249 51 38 chrX_random 203786 205458 -9093548 - L1M4 LINE L1 -1186 4960 3268 * 807 161 31 0 chrX_random 205471 205601 -9093405 - AluJo SINE Alu -178 134 1 13986 196 75 7 chrX_random 206020 209597 -9089409 + L1M1 LINE L1 16 4008 -3557 4700 254 7 8 chrX_random 209598 210807 -9088199 + L1M1 LINE L1 4990 6196 -1369 2057 142 24 37 chrX_random 210807 211009 -9087997 + THE1C LTR MaLR 1 197 -178 2215 114 0 3 chrX_random 211009 211307 -9087699 - AluY SINE Alu -14 297 1 2057 142 24 37 chrX_random 211307 211484 -9087522 + THE1C LTR MaLR 197 375 0 10063 128 39 3 chrX_random 211484 213010 -9085996 + THE1C-int LTR MaLR 1 1580 0 3201 164 26 16 chrX_random 213027 213606 -9085400 + MSTA-int LTR MaLR 990 1574 -6 2495 166 16 5 chrX_random 213611 214034 -9084972 + MSTA LTR MaLR 1 428 0 3833 193 18 11 chrX_random 214034 214988 -9084018 + L1M1 LINE L1 4511 5472 -743 3361 87 30 2 chrX_random 215013 215483 -9083523 - L1PA10 LINE L1 -13 6155 5673 4607 109 21 1 chrX_random 215485 216355 -9082651 - L1PA10 LINE L1 -236 5932 5049 5098 148 27 16 chrX_random 216355 217158 -9081848 + L1MA3 LINE L1 5370 6186 -119 3662 109 0 4 chrX_random 217158 217671 -9081335 - MER9 LTR ERVK 0 511 1 5098 148 27 16 chrX_random 217671 217793 -9081213 + L1MA3 LINE L1 6186 6305 0 1328 244 118 73 chrX_random 218488 219160 -9079846 - MER50 LTR ERV1 -23 711 10 1623 199 28 45 chrX_random 219394 219569 -9079437 + MLT1B LTR MaLR 1 178 -212 2406 82 0 3 chrX_random 219569 219873 -9079133 + AluY SINE Alu 1 303 -8 1623 199 28 45 chrX_random 219873 220094 -9078912 + MLT1B LTR MaLR 178 390 0 1358 276 92 13 chrX_random 220140 220608 -9078398 - MLT1D LTR MaLR 0 505 1 183 216 11 23 chrX_random 220625 220713 -9078293 + CT-rich Low_complexity Low_complexity 2 88 0 13545 25 0 0 chrX_random 221660 224019 -9074987 - L1PA2 LINE L1 -1 6154 3796 46 19 0 0 chrX_random 224208 224261 -9074745 + AT_rich Low_complexity Low_complexity 1 53 0 294 350 61 30 chrX_random 225449 225646 -9073360 + MIR SINE MIR 18 220 -42 2127 128 3 0 chrX_random 226309 226630 -9072376 - L1PA15 LINE L1 -4 6161 5840 1248 128 0 87 chrX_random 227051 227293 -9071713 - AluJb SINE Alu 0 307 85 10249 148 12 8 chrX_random 228806 229834 -9069172 + L1MA1 LINE L1 3342 4364 -1938 1922 146 0 10 chrX_random 229834 230129 -9068877 + AluSc SINE Alu 1 292 -17 10249 148 12 8 chrX_random 230129 232050 -9066956 + L1MA1 LINE L1 4364 6302 0 215 219 0 0 chrX_random 232789 232830 -9066176 + (TG)n Simple_repeat Simple_repeat 1 41 0 415 340 98 66 chrX_random 234101 234436 -9064570 - L2 LINE L2 -1 3271 2926 707 201 7 13 chrX_random 234443 234592 -9064414 - MER45C DNA AcHobo -6 947 800 614 221 9 0 chrX_random 234709 234822 -9064184 - MER45C DNA AcHobo -747 206 93 4679 277 60 14 chrX_random 234822 236182 -9062824 + L1M4 LINE L1 13 1435 -5424 1260 264 20 3 chrX_random 236185 236575 -9062431 + L1M4 LINE L1 4836 5232 -1725 390 174 35 26 chrX_random 236561 236676 -9062330 + L1M4 LINE L1 6033 6148 -809 * 431 269 187 11 chrX_random 236693 236875 -9062131 - L2 LINE L2 -558 2756 2543 494 193 19 12 chrX_random 236884 237010 -9061996 - L1MA4A LINE L1 -1 6280 6053 * 714 157 7 20 chrX_random 236996 237149 -9061857 - L1MA4A LINE L1 -181 6122 5972 362 329 102 9 chrX_random 237450 237666 -9061340 + MIR SINE MIR 15 250 -12 228 178 0 0 chrX_random 238091 238136 -9060870 - L1 LINE L1 -1626 4520 4476 6509 66 34 13 chrX_random 238201 238966 -9060040 - L1PA8A LINE L1 -13 6118 5371 2208 119 0 0 chrX_random 238966 239260 -9059746 - AluSc SINE Alu -15 294 1 6509 66 34 13 chrX_random 239260 240144 -9058862 - L1PA8A LINE L1 -760 5371 4453 949 227 5 23 chrX_random 240167 240410 -9058596 - AluJo SINE Alu 0 311 73 411 233 0 0 chrX_random 240410 240513 -9058493 - L1 LINE L1 -1668 4478 4376 2515 186 14 4 chrX_random 240553 241049 -9057957 + L1MA9 LINE L1 5611 6111 -201 314 267 48 24 chrX_random 241049 241214 -9057792 + L1M4 LINE L1 3239 3407 -2739 23 0 0 0 chrX_random 241434 241457 -9057549 + AT_rich Low_complexity Low_complexity 1 23 0 347 147 29 0 chrX_random 241484 241552 -9057454 + GA-rich Low_complexity Low_complexity 1 70 0 23 68 0 0 chrX_random 243597 243641 -9055365 + AT_rich Low_complexity Low_complexity 1 44 0 239 321 36 27 chrX_random 243783 243895 -9055111 + MLT1K LTR MaLR 279 391 -197 192 97 0 0 chrX_random 244043 244074 -9054932 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 323 234 117 23 chrX_random 244140 244268 -9054738 - L1ME LINE L1 -461 5660 5521 243 220 0 0 chrX_random 244348 244398 -9054608 - L2 LINE L2 -1 3312 3263 638 124 0 9 chrX_random 244752 244857 -9054149 - L1MB3 LINE L1 -228 5955 5852 4752 182 9 28 chrX_random 245337 246523 -9052483 + L1MB3 LINE L1 5016 6181 -2 2436 71 0 0 chrX_random 247725 248021 -9050985 - AluY SINE Alu -15 296 1 310 218 45 23 chrX_random 248059 248192 -9050814 + (TA)n Simple_repeat Simple_repeat 1 136 0 1857 135 3 93 chrX_random 251358 251714 -9047292 - MER4A LTR ERV1 0 664 341 493 135 101 0 chrX_random 251730 251819 -9047187 - MER4A LTR ERV1 -566 98 1 2362 83 35 11 chrX_random 251824 252172 -9046834 - MER4A-int LTR ERV1 -1 6597 6242 1883 128 7 7 chrX_random 252178 252476 -9046530 - L1MA4A LINE L1 -309 5994 5697 5068 40 14 3 chrX_random 252573 253200 -9045806 - L1PA5 LINE L1 -5 6149 5516 1315 238 59 85 chrX_random 254576 254649 -9044357 + MLT1G LTR MaLR 1 74 -516 2485 71 0 10 chrX_random 254649 254958 -9044048 + AluY SINE Alu 1 306 -5 1315 238 59 85 chrX_random 254958 255478 -9043528 + MLT1G LTR MaLR 74 526 -64 185 414 53 0 chrX_random 255614 255747 -9043259 + L2 LINE L2 394 533 -2781 393 81 0 81 chrX_random 257403 257465 -9041541 - AluJ/FRAM SINE Alu -13 289 233 521 208 48 16 chrX_random 257766 257891 -9041115 - L1MEc LINE L1 -4391 2005 1877 1559 230 73 5 chrX_random 258152 258521 -9040485 - MSTD LTR MaLR -2 394 1 326 256 12 0 chrX_random 258521 258607 -9040399 + L1ME3A LINE L1 6078 6164 -6 4603 260 24 15 chrX_random 258812 261734 -9037272 + L1PA13 LINE L1 1 3392 -3405 4643 215 27 1 chrX_random 261771 262819 -9036187 + L1 LINE L1 4509 5583 -1214 * 20088 179 15 5 chrX_random 262809 267068 -9031938 - L1PA12 LINE L1 -2730 4854 533 1835 166 75 3 chrX_random 267068 267388 -9031618 + MER61A LTR ERV1 1 343 0 20088 179 15 5 chrX_random 267388 267927 -9031079 - L1PA12 LINE L1 -7051 533 1 684 241 57 25 chrX_random 267944 268189 -9030817 - L1MA7 LINE L1 -12 6279 6027 231 378 0 10 chrX_random 268744 268842 -9030164 - MIR SINE MIR -62 146 50 2424 85 0 3 chrX_random 270229 270534 -9028472 + AluY SINE Alu 1 304 -7 3740 252 38 58 chrX_random 270660 272833 -9026173 + L1PBa LINE L1 67 1644 -5219 379 257 164 13 chrX_random 273083 273235 -9025771 - MIR SINE MIR -30 232 58 191 282 127 36 chrX_random 273728 273838 -9025168 - MIR SINE MIR -86 176 57 432 294 32 35 chrX_random 274330 274560 -9024446 + MIR SINE MIR 30 251 -11 767 307 69 38 chrX_random 274592 275186 -9023820 - L2 LINE L2 -1 3312 2505 242 350 130 35 chrX_random 275490 275921 -9023085 - L3 LINE CR1 -796 781 310 3639 257 63 28 chrX_random 276002 277583 -9021423 - L1ME1 LINE L1 -4 6162 4460 1901 96 4 4 chrX_random 277583 277843 -9021163 + AluSx SINE Alu 36 295 -17 3639 257 63 28 chrX_random 277843 278742 -9020264 - L1ME1 LINE L1 -1706 4460 3594 1047 143 5 71 chrX_random 278771 278981 -9020025 - L1MA2 LINE L1 0 6304 6109 207 117 33 33 chrX_random 278985 279045 -9019961 + (TTAA)n Simple_repeat Simple_repeat 1 60 0 2792 122 22 4 chrX_random 279049 279115 -9019891 - L1MA2 LINE L1 -209 6095 6030 970 273 32 48 chrX_random 279115 279551 -9019455 - L1PA15 LINE L1 -144 6021 5593 21 36 0 0 chrX_random 279615 279643 -9019363 + AT_rich Low_complexity Low_complexity 1 28 0 355 248 80 35 chrX_random 279834 279901 -9019105 - MER5B DNA MER1_type -2 176 101 2257 260 36 12 chrX_random 279901 280540 -9018466 + MLT1E1 LTR MaLR 1 654 0 355 248 80 35 chrX_random 280540 280585 -9018421 - MER5B DNA MER1_type -77 101 59 684 99 0 10 chrX_random 280588 280689 -9018317 - AluSg/x SINE Alu -17 295 196 186 125 31 0 chrX_random 280727 280759 -9018247 + MER5B DNA MER1_type 1 33 -145 22 35 0 0 chrX_random 280876 280905 -9018101 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chrX_random 281107 281128 -9017878 + AT_rich Low_complexity Low_complexity 1 21 0 823 261 17 0 chrX_random 281502 281682 -9017324 + MER5A DNA MER1_type 1 183 -6 299 301 34 67 chrX_random 282952 283221 -9015785 - ERVL LTR ERVL -431 5333 5074 306 232 21 32 chrX_random 283487 283582 -9015424 + HERVL LTR ERVL 3048 3141 -2513 838 176 0 20 chrX_random 283794 283947 -9015059 - MER3 DNA MER1_type -59 150 1 472 299 0 0 chrX_random 283998 284115 -9014891 + HERVL LTR ERVL 3352 3468 -2296 816 177 63 23 chrX_random 284523 284698 -9014308 + MSTD LTR MaLR 1 182 -214 2026 113 0 44 chrX_random 285195 285513 -9013493 - AluSg SINE Alu -6 304 1 6046 264 54 9 chrX_random 285713 288239 -9010767 - L1PBb LINE L1 -3113 4471 1735 3292 139 30 85 chrX_random 288419 289150 -9009856 - LTR8 LTR ERV1 0 691 1 520 281 53 89 chrX_random 289150 289431 -9009575 - L1PBb LINE L1 -5786 1799 1529 310 277 0 0 chrX_random 289458 289523 -9009483 - L1PBb LINE L1 -6367 1218 1154 1394 274 24 14 chrX_random 289984 290460 -9008546 - L1M2 LINE L1 -6475 1110 10 1911 199 28 2 chrX_random 290526 291036 -9007970 + L1MC/D LINE L1 5140 5660 -684 688 182 35 41 chrX_random 291032 291202 -9007804 - L1M4 LINE L1 -1947 4199 4031 * 2632 236 85 30 chrX_random 291343 292365 -9006641 - L1M4 LINE L1 -2090 4056 2979 965 264 44 19 chrX_random 292407 293087 -9005919 - L1MEc LINE L1 -5160 1236 491 23 0 0 0 chrX_random 294219 294242 -9004764 + AT_rich Low_complexity Low_complexity 1 23 0 3422 165 68 17 chrX_random 294314 295006 -9004000 + LTR8A LTR ERV1 1 727 0 256 253 265 0 chrX_random 295062 295145 -9003861 + MIR SINE MIR 66 170 -92 194 281 98 78 chrX_random 295541 295694 -9003312 - L2 LINE L2 -182 3090 2935 214 348 45 0 chrX_random 296241 296330 -9002676 + MIR3 SINE MIR 87 179 -29 345 390 68 33 chrX_random 296831 297375 -9001631 - L2 LINE L2 -355 2959 2397 338 331 43 33 chrX_random 297903 298087 -9000919 + L2 LINE L2 2179 2364 -950 613 288 23 42 chrX_random 298559 298774 -9000232 + MIR SINE MIR 10 220 -42 21 36 0 0 chrX_random 298793 298821 -9000185 + AT_rich Low_complexity Low_complexity 1 28 0 1598 308 75 47 chrX_random 299188 300364 -8998642 + ERVL LTR ERVL 4237 5445 -319 2393 86 0 6 chrX_random 300612 300925 -8998081 - AluSx SINE Alu -1 311 1 189 0 0 0 chrX_random 301958 301979 -8997027 + (TC)n Simple_repeat Simple_repeat 1 21 0 1625 273 71 15 chrX_random 302431 302908 -8996098 - LTR40a LTR ERVL -15 504 1 360 0 0 0 chrX_random 303414 303454 -8995552 + (CA)n Simple_repeat Simple_repeat 2 41 0 228 255 0 0 chrX_random 303480 303527 -8995479 + (CATA)n Simple_repeat Simple_repeat 2 48 0 2789 91 3 0 chrX_random 304291 304665 -8994341 - THE1C LTR MaLR 0 375 1 10640 91 37 37 chrX_random 304665 306244 -8992762 - THE1C-int LTR MaLR 0 1580 2 2610 111 11 0 chrX_random 306245 306616 -8992390 - THE1C LTR MaLR 0 375 1 626 206 10 93 chrX_random 306714 306793 -8992213 + MIR SINE MIR 45 129 -133 1606 184 0 38 chrX_random 306793 307108 -8991898 - AluJo SINE Alu -9 303 1 626 206 10 93 chrX_random 307108 307232 -8991774 + MIR SINE MIR 129 231 -31 457 319 83 83 chrX_random 307558 308038 -8990968 + L2 LINE L2 2774 3253 -19 689 158 0 36 chrX_random 308052 308191 -8990815 + L1P LINE L1 4535 4668 -1478 957 139 0 6 chrX_random 308193 308351 -8990655 + L1PA16 LINE L1 6008 6164 -2 331 244 22 33 chrX_random 308546 308636 -8990370 - MIR SINE MIR -108 154 66 268 265 60 12 chrX_random 308693 308776 -8990230 + MIR SINE MIR 45 131 -131 365 259 35 24 chrX_random 309035 309158 -8989848 + MLT1H1 LTR MaLR 43 206 -343 261 146 0 0 chrX_random 309298 309346 -8989660 + (GA)n Simple_repeat Simple_repeat 1 48 0 600 242 101 28 chrX_random 309361 309609 -8989397 + MLT1H1 LTR MaLR 290 555 0 389 219 0 0 chrX_random 311475 311571 -8987435 + L1 LINE L1 3040 3135 -3011 * 390 151 0 0 chrX_random 311567 311640 -8987366 + L1MA9 LINE L1 6240 6312 0 244 154 36 55 chrX_random 311891 311952 -8987054 + (TA)n Simple_repeat Simple_repeat 2 63 -46 1932 107 44 4 chrX_random 311952 312243 -8986763 - AluSx SINE Alu 0 304 3 2229 101 0 3 chrX_random 312245 312541 -8986465 - AluSx SINE Alu -17 295 1 244 154 36 55 chrX_random 312541 312585 -8986421 + (TA)n Simple_repeat Simple_repeat 64 109 0 369 0 0 0 chrX_random 312592 312633 -8986373 + (TG)n Simple_repeat Simple_repeat 2 42 0 1926 153 0 3 chrX_random 312636 312930 -8986076 - AluJo SINE Alu -14 298 6 812 322 144 32 chrX_random 313182 313789 -8985217 + L2 LINE L2 2633 3310 -3 25 0 0 0 chrX_random 314652 314677 -8984329 + AT_rich Low_complexity Low_complexity 1 25 0 372 366 14 7 chrX_random 314811 314953 -8984053 + MIR3 SINE MIR 34 176 -32 306 295 13 0 chrX_random 315152 315230 -8983776 - MIR SINE MIR -165 97 19 708 169 108 0 chrX_random 315342 315472 -8983534 + Tigger4(Zombi) DNA MER2_type 1 144 -2587 * 5100 119 10 49 chrX_random 315471 316367 -8982639 + Tigger4(Zombi) DNA MER2_type 1871 2731 0 1327 293 95 27 chrX_random 316540 316922 -8982084 + L2 LINE L2 1285 1727 -1587 2335 94 3 0 chrX_random 316922 317219 -8981787 - AluSp SINE Alu -15 298 1 1327 293 95 27 chrX_random 317219 317458 -8981548 + L2 LINE L2 1727 1948 -1366 3047 166 50 0 chrX_random 317465 318066 -8980940 - L1MA9 LINE L1 -2 6310 5680 2155 82 55 3 chrX_random 318066 318359 -8980647 + AluY SINE Alu 1 308 -3 2320 182 26 18 chrX_random 318377 318791 -8980215 + L1M2 LINE L1 4800 5209 -1103 6253 79 16 25 chrX_random 318791 319834 -8979172 + L1PA10 LINE L1 5123 6166 -2 2320 182 26 18 chrX_random 319834 320243 -8978763 + L1M2 LINE L1 5209 5632 -680 1024 311 99 34 chrX_random 320245 321017 -8977989 + L2 LINE L2 1942 2964 -349 6652 52 13 5 chrX_random 321020 321867 -8977139 - L1PA6 LINE L1 -2 6152 5299 648 303 19 69 chrX_random 321867 322230 -8976776 + L2 LINE L2 2962 3306 -7 2295 76 3 13 chrX_random 322904 323218 -8975788 - AluY SINE Alu 0 311 1 880 275 63 38 chrX_random 323267 323663 -8975343 - L1MDa LINE L1 -6127 413 8 2676 20 0 0 chrX_random 324801 325098 -8973908 + AluYa5 SINE Alu 1 297 -14 441 266 86 0 chrX_random 325557 325685 -8973321 - MIR3 SINE MIR -28 180 42 617 236 103 29 chrX_random 325717 325891 -8973115 - MER5A DNA MER1_type -1 188 2 4807 164 16 11 chrX_random 325942 326831 -8972175 - L1MB3 LINE L1 -1 6182 5290 2318 107 0 0 chrX_random 326849 327157 -8971849 - AluSg SINE Alu -2 308 1 29 28 0 0 chrX_random 327176 327212 -8971794 + AT_rich Low_complexity Low_complexity 1 36 0 839 253 142 4 chrX_random 328538 329181 -8969825 + L1MB5 LINE L1 5362 6132 -38 4038 201 28 54 chrX_random 331025 331540 -8967466 + L1MD1 LINE L1 4951 5478 -764 2195 104 3 3 chrX_random 331540 331862 -8967144 + AluSp SINE Alu 2 313 0 4038 201 28 54 chrX_random 331862 332628 -8966378 + L1MD1 LINE L1 5478 6214 -28 2463 60 0 7 chrX_random 332778 333080 -8965926 + AluY SINE Alu 1 300 -11 2043 129 153 5 chrX_random 333249 333622 -8965384 + MSTA LTR MaLR 1 428 0 1036 225 86 7 chrX_random 333732 333815 -8965191 + L1M1 LINE L1 11 86 -7479 183 42 0 0 chrX_random 333815 333839 -8965167 + (CA)n Simple_repeat Simple_repeat 2 25 0 1036 225 86 7 chrX_random 333839 334194 -8964812 + L1M1 LINE L1 86 531 -7034 976 167 52 0 chrX_random 334194 334368 -8964638 + MSTA LTR MaLR 246 428 0 6124 116 52 9 chrX_random 334374 335422 -8963584 + L1MA2 LINE L1 5213 6304 0 640 341 48 19 chrX_random 336142 336456 -8962550 + LTR16C LTR ERVL 168 490 -1 283 250 12 0 chrX_random 336562 336646 -8962360 + L1PB4 LINE L1 6070 6154 -2 1301 57 108 0 chrX_random 337418 337594 -8961412 - MER4E LTR ERV1 0 766 572 514 133 133 9 chrX_random 337594 337707 -8961299 + FLAM_C SINE Alu 1 127 -16 243 0 0 0 chrX_random 337707 337734 -8961272 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 4024 76 32 5 chrX_random 337734 338298 -8960708 - MER4E LTR ERV1 -187 579 1 5232 109 16 12 chrX_random 338350 339126 -8959880 - MER4E LTR ERV1 0 779 1 315 181 48 60 chrX_random 339829 339912 -8959094 - L1MC4 LINE L1 -1337 6705 6624 628 167 0 9 chrX_random 339912 340020 -8958986 - MER4B LTR ERV1 -293 317 211 578 35 83 35 chrX_random 340029 340337 -8958669 + (TA)n Simple_repeat Simple_repeat 1 322 0 1580 104 0 5 chrX_random 340337 340557 -8958449 - MER4B LTR ERV1 -391 219 1 10682 126 47 7 chrX_random 340557 342238 -8956768 - MER4B-int LTR ERV1 0 6758 5010 * 15612 126 90 47 chrX_random 342235 344236 -8954770 - MER4B-int LTR ERV1 -2276 4482 2293 1950 109 44 4 chrX_random 344236 344510 -8954496 + AluSc SINE Alu 4 288 -21 15612 126 90 47 chrX_random 344510 345691 -8953315 - MER4B-int LTR ERV1 -4465 2293 1164 2192 200 36 86 chrX_random 345705 346393 -8952613 - MER61E LTR ERV1 0 779 1 1860 168 45 22 chrX_random 346393 346793 -8952213 - MER4B-int LTR ERV1 -5593 1165 757 2888 124 19 14 chrX_random 346797 347388 -8951618 + MER4E LTR ERV1 1 761 -5 2063 186 16 0 chrX_random 347395 347761 -8951245 - MER4B-int LTR ERV1 -6004 754 383 727 172 53 18 chrX_random 347775 347944 -8951062 - MER4B-int LTR ERV1 -5159 1439 1265 2562 133 122 32 chrX_random 348016 348654 -8950352 - MER4B-int LTR ERV1 -5789 809 2 3364 116 47 67 chrX_random 348658 349181 -8949825 - MER4B LTR ERV1 0 610 101 1608 179 35 7 chrX_random 349181 349471 -8949535 - AluJb SINE Alu -14 298 1 3364 116 47 67 chrX_random 349471 349570 -8949436 - MER4B LTR ERV1 -509 101 1 528 284 74 79 chrX_random 349658 349794 -8949212 + L1MEd LINE L1 832 967 -5162 3946 28 45 0 chrX_random 349794 350263 -8948743 - LTR2B LTR ERV1 0 490 1 528 284 74 79 chrX_random 350263 350561 -8948445 + L1MEd LINE L1 967 1265 -4864 191 36 36 0 chrX_random 350561 350589 -8948417 + (TAA)n Simple_repeat Simple_repeat 1 29 0 528 284 74 79 chrX_random 350589 350874 -8948132 + L1MEd LINE L1 1265 1568 -4561 1617 273 71 15 chrX_random 351357 351833 -8947173 - LTR40a LTR ERVL -15 504 2 360 0 0 0 chrX_random 352341 352381 -8946625 + (CA)n Simple_repeat Simple_repeat 2 41 0 228 255 0 0 chrX_random 352407 352454 -8946552 + (CATA)n Simple_repeat Simple_repeat 2 48 0 2789 91 3 0 chrX_random 353218 353592 -8945414 - THE1C LTR MaLR 0 375 1 10628 92 37 37 chrX_random 353592 355171 -8943835 - THE1C-int LTR MaLR 0 1580 2 2610 111 11 0 chrX_random 355172 355543 -8943463 - THE1C LTR MaLR 0 375 1 626 206 10 93 chrX_random 355641 355720 -8943286 + MIR SINE MIR 45 129 -133 1606 184 0 38 chrX_random 355720 356035 -8942971 - AluJo SINE Alu -9 303 1 626 206 10 93 chrX_random 356035 356159 -8942847 + MIR SINE MIR 129 231 -31 457 319 83 83 chrX_random 356486 356966 -8942040 + L2 LINE L2 2774 3253 -19 689 158 0 36 chrX_random 356980 357119 -8941887 + L1P LINE L1 4535 4668 -1478 957 139 0 6 chrX_random 357121 357279 -8941727 + L1PA16 LINE L1 6008 6164 -2 331 244 22 33 chrX_random 357474 357564 -8941442 - MIR SINE MIR -108 154 66 243 289 60 12 chrX_random 357621 357704 -8941302 + MIR SINE MIR 45 131 -131 22 0 0 0 chrX_random 357725 357747 -8941259 + AT_rich Low_complexity Low_complexity 1 22 0 365 259 35 24 chrX_random 357964 358087 -8940919 + MLT1H1 LTR MaLR 43 206 -343 261 146 0 0 chrX_random 358227 358275 -8940731 + (GA)n Simple_repeat Simple_repeat 1 48 0 600 242 101 28 chrX_random 358290 358538 -8940468 + MLT1H1 LTR MaLR 290 555 0 389 219 0 0 chrX_random 360404 360500 -8938506 + L1 LINE L1 3040 3135 -3011 * 390 151 0 0 chrX_random 360496 360569 -8938437 + L1MA9 LINE L1 6240 6312 0 244 154 36 55 chrX_random 360820 360881 -8938125 + (TA)n Simple_repeat Simple_repeat 2 63 -46 1932 107 44 4 chrX_random 360881 361172 -8937834 - AluSx SINE Alu 0 304 3 2229 101 0 3 chrX_random 361174 361470 -8937536 - AluSx SINE Alu -17 295 1 244 154 36 55 chrX_random 361470 361514 -8937492 + (TA)n Simple_repeat Simple_repeat 64 109 0 369 0 0 0 chrX_random 361521 361562 -8937444 + (TG)n Simple_repeat Simple_repeat 2 42 0 1926 153 0 3 chrX_random 361565 361859 -8937147 - AluJo SINE Alu -14 298 6 812 322 144 32 chrX_random 362108 362715 -8936291 + L2 LINE L2 2633 3310 -3 25 0 0 0 chrX_random 363578 363603 -8935403 + AT_rich Low_complexity Low_complexity 1 25 0 372 366 14 7 chrX_random 363737 363879 -8935127 + MIR3 SINE MIR 34 176 -32 306 295 13 0 chrX_random 364078 364156 -8934850 - MIR SINE MIR -165 97 19 708 169 108 0 chrX_random 364268 364398 -8934608 + Tigger4(Zombi) DNA MER2_type 1 144 -2587 * 5100 119 10 49 chrX_random 364397 365293 -8933713 + Tigger4(Zombi) DNA MER2_type 1871 2731 0 1327 293 95 27 chrX_random 365466 365848 -8933158 + L2 LINE L2 1285 1727 -1587 2335 94 3 0 chrX_random 365848 366145 -8932861 - AluSp SINE Alu -15 298 1 1327 293 95 27 chrX_random 366145 366384 -8932622 + L2 LINE L2 1727 1948 -1366 3005 170 50 0 chrX_random 366391 366992 -8932014 - L1MA9 LINE L1 -2 6310 5680 2147 82 55 3 chrX_random 366992 367284 -8931722 + AluY SINE Alu 1 307 -4 2320 182 26 18 chrX_random 367302 367716 -8931290 + L1M2 LINE L1 4800 5209 -1103 6268 79 15 25 chrX_random 367716 368760 -8930246 + L1PA10 LINE L1 5123 6166 -2 2320 182 26 18 chrX_random 368760 369169 -8929837 + L1M2 LINE L1 5209 5632 -680 1024 311 99 34 chrX_random 369171 369943 -8929063 + L2 LINE L2 1942 2964 -349 6652 52 13 5 chrX_random 369946 370793 -8928213 - L1PA6 LINE L1 -2 6152 5299 648 303 19 69 chrX_random 370793 371156 -8927850 + L2 LINE L2 2962 3306 -7 2295 76 3 13 chrX_random 371830 372144 -8926862 - AluY SINE Alu 0 311 1 880 275 63 38 chrX_random 372193 372589 -8926417 - L1MDa LINE L1 -6127 413 8 2695 17 0 0 chrX_random 373727 374024 -8924982 + AluYa5 SINE Alu 1 297 -14 441 266 86 0 chrX_random 374483 374611 -8924395 - MIR3 SINE MIR -28 180 42 617 236 103 29 chrX_random 374643 374817 -8924189 - MER5A DNA MER1_type -1 188 2 4807 164 16 11 chrX_random 374868 375757 -8923249 - L1MB3 LINE L1 -1 6182 5290 1890 104 4 4 chrX_random 375781 376049 -8922957 - AluSx SINE Alu -9 303 36 1732 252 68 36 chrX_random 376063 377344 -8921662 + L1ME1 LINE L1 4534 5858 -308 3173 80 48 25 chrX_random 377451 377927 -8921079 + MER4E LTR ERV1 93 579 -187 2384 83 0 6 chrX_random 377927 378240 -8920766 - AluY SINE Alu 0 311 1 285 240 16 62 chrX_random 378246 378375 -8920631 - LTR27 LTR ERV1 -214 422 300 262 287 67 73 chrX_random 378848 378998 -8920008 + MER5A DNA MER1_type 34 182 -7 210 388 37 0 chrX_random 379073 379207 -8919799 + L2 LINE L2 2236 2374 -940 4153 197 38 21 chrX_random 379401 380237 -8918769 + MER21B LTR ERV1 13 862 -1 2643 159 16 21 chrX_random 380920 381437 -8917569 + L1MA5 LINE L1 5787 6300 0 309 283 78 36 chrX_random 381439 381605 -8917401 + HAL1 LINE L1 2335 2507 0 6474 144 31 8 chrX_random 382018 382467 -8916539 - Tigger1 DNA MER2_type 0 2418 1981 707 141 0 44 chrX_random 382467 382602 -8916404 - L1PA16 LINE L1 0 6166 6038 6474 144 31 8 chrX_random 382602 383253 -8915753 - Tigger1 DNA MER2_type -437 1981 1293 22 0 0 0 chrX_random 383963 383985 -8915021 + AT_rich Low_complexity Low_complexity 1 22 0 297 0 0 0 chrX_random 384106 384139 -8914867 + (TA)n Simple_repeat Simple_repeat 1 33 0 252 0 0 0 chrX_random 384138 384166 -8914840 + (CA)n Simple_repeat Simple_repeat 2 29 0 * 3304 145 0 6 chrX_random 384398 384944 -8914062 - L1MC1 LINE L1 -483 5850 5313 * 6036 146 12 16 chrX_random 384942 386076 -8912930 - L1MA5A LINE L1 -1 6296 5169 2751 84 0 0 chrX_random 386076 386431 -8912575 + THE1A LTR MaLR 1 355 0 1830 249 12 7 chrX_random 386438 387012 -8911994 - L1MC1 LINE L1 -824 5322 4746 22 35 0 0 chrX_random 387019 387048 -8911958 + AT_rich Low_complexity Low_complexity 1 29 0 1101 164 19 5 chrX_random 387582 387790 -8911216 - L1PA16 LINE L1 -9 6157 5947 235 270 0 0 chrX_random 388905 388968 -8910038 + MIR SINE MIR 156 218 -44 3869 140 19 0 chrX_random 389399 390048 -8908958 - L1MA4 LINE L1 -6 6294 5634 1271 147 5 4 chrX_random 390048 390286 -8908720 + L1MA4 LINE L1 5427 5660 -506 1557 244 52 40 chrX_random 390361 390864 -8908142 + MER74B LTR ERVL 79 587 -35 501 278 94 5 chrX_random 390989 391180 -8907826 + MLT1K LTR MaLR 375 582 -6 24 0 0 0 chrX_random 392764 392788 -8906218 + AT_rich Low_complexity Low_complexity 1 24 0 478 346 33 0 chrX_random 394324 394506 -8904500 + LTR16A LTR ERVL 30 217 -233 1681 213 19 139 chrX_random 394517 395220 -8903786 - L1M3e LINE L1 -6371 659 42 3411 278 90 42 chrX_random 395226 396685 -8902321 - L1M4b LINE L1 -5179 1680 163 4472 75 8 8 chrX_random 396685 397276 -8901730 + LTR10C LTR ERV1 1 591 0 3411 278 90 42 chrX_random 397276 397431 -8901575 - L1M4b LINE L1 -6696 163 17 240 100 0 0 chrX_random 397479 397519 -8901487 + (CA)n Simple_repeat Simple_repeat 2 41 0 301 279 107 0 chrX_random 397540 397662 -8901344 + MER112 DNA MER1_type 96 230 -30 2304 55 45 0 chrX_random 399261 399550 -8899456 - AluY SINE Alu -9 302 1 1720 129 0 0 chrX_random 399702 399957 -8899049 - AluSx SINE Alu 0 305 51 1341 88 16 10 chrX_random 401018 401210 -8897796 + AluY SINE Alu 109 301 -10 346 333 69 2 chrX_random 401355 401548 -8897458 + MIR SINE MIR 13 262 0 26 74 0 0 chrX_random 401717 401771 -8897235 + AT_rich Low_complexity Low_complexity 1 54 0 1903 133 73 14 chrX_random 404333 404687 -8894319 - THE1C LTR MaLR 0 375 1 1838 317 47 13 chrX_random 404874 405572 -8893434 - L2 LINE L2 -602 2712 1991 463 325 119 7 chrX_random 405616 405893 -8893113 - L2 LINE L2 -2566 748 441 1288 190 105 57 chrX_random 406734 406991 -8892015 + MER31B LTR ERV1 34 277 -266 4255 146 12 0 chrX_random 406991 407676 -8891330 - L1PA15 LINE L1 -2 6163 5471 1288 190 105 57 chrX_random 407676 407823 -8891183 + MER31B LTR ERV1 277 541 -2 23 0 0 0 chrX_random 408011 408034 -8890972 + AT_rich Low_complexity Low_complexity 1 23 0 2193 95 0 3 chrX_random 408253 408577 -8890429 + AluSx SINE Alu 1 323 0 808 328 17 20 chrX_random 409446 409742 -8889264 + MLT1H1 LTR MaLR 16 310 -245 1636 157 178 9 chrX_random 410191 410522 -8888484 - MSTA LTR MaLR 0 428 42 700 159 8 30 chrX_random 410622 410754 -8888252 + MER21A LTR ERV1 137 265 -666 2670 166 36 57 chrX_random 410767 411298 -8887708 + MER21A LTR ERV1 395 914 -17 28 0 0 0 chrX_random 411324 411352 -8887654 + AT_rich Low_complexity Low_complexity 1 28 0 217 209 30 30 chrX_random 412124 412191 -8886815 + (TAAA)n Simple_repeat Simple_repeat 4 70 0 25 51 0 0 chrX_random 412628 412667 -8886339 + AT_rich Low_complexity Low_complexity 1 39 0 2536 68 0 0 chrX_random 412917 413228 -8885778 - AluY SINE Alu 0 311 1 1543 188 17 20 chrX_random 413229 413527 -8885479 - AluJo SINE Alu -15 297 1 34 0 0 0 chrX_random 413723 413757 -8885249 + AT_rich Low_complexity Low_complexity 1 34 0 2323 84 0 0 chrX_random 413762 414048 -8884958 - AluSc SINE Alu -21 288 3 23 33 0 0 chrX_random 414050 414080 -8884926 + AT_rich Low_complexity Low_complexity 1 30 0 342 0 0 0 chrX_random 415221 415259 -8883747 + (CA)n Simple_repeat Simple_repeat 2 39 0 4297 154 11 14 chrX_random 415268 415981 -8883025 - MER50 LTR ERV1 -23 711 1 383 93 0 0 chrX_random 416142 416196 -8882810 - MSTA LTR MaLR -374 54 1 2198 68 0 0 chrX_random 417372 417638 -8881368 - AluY SINE Alu -11 300 35 512 354 43 50 chrX_random 418413 418693 -8880313 - L2 LINE L2 -2 3270 2993 328 335 7 52 chrX_random 418708 418863 -8880143 + LTR16A LTR ERVL 1 148 -302 3733 190 50 1 chrX_random 418865 419624 -8879382 - L1 LINE L1 -1962 4184 3389 2672 155 26 0 chrX_random 419624 420050 -8878956 + Tigger3(Golem) DNA MER2_type 2593 3029 0 363 366 43 39 chrX_random 420181 420438 -8878568 + L1MDa LINE L1 1 258 -6282 606 268 117 62 chrX_random 421032 421111 -8877895 + L1MDa LINE L1 916 989 -5627 2592 43 0 0 chrX_random 421111 421413 -8877593 - AluY SINE Alu -9 302 1 606 268 117 62 chrX_random 421413 421767 -8877239 + L1MDa LINE L1 989 1322 -5294 2216 91 0 3 chrX_random 421767 422105 -8876901 + AluY SINE Alu 1 337 0 606 268 117 62 chrX_random 422105 422390 -8876616 + L1MDa LINE L1 1322 1683 -4933 225 132 0 0 chrX_random 422446 422484 -8876522 + (TA)n Simple_repeat Simple_repeat 2 39 0 245 197 13 0 chrX_random 422564 422640 -8876366 + GA-rich Low_complexity Low_complexity 2 78 0 219 69 0 0 chrX_random 422638 422667 -8876339 + (CAA)n Simple_repeat Simple_repeat 2 30 0 * 2053 132 3 0 chrX_random 422712 423000 -8876006 + AluSq SINE Alu 3 291 -22 2378 233 34 35 chrX_random 423060 423359 -8875647 + L1M4 LINE L1 4442 4740 -1406 359 177 52 10 chrX_random 423359 423453 -8875553 + L1MA6 LINE L1 6201 6300 0 2378 233 34 35 chrX_random 423453 423913 -8875093 + L1M4 LINE L1 4740 5200 -946 2017 76 0 36 chrX_random 423988 424263 -8874743 - AluSg SINE Alu -45 265 1 4903 102 31 1 chrX_random 424347 425059 -8873947 - L1PA13 LINE L1 -1 6162 5430 2924 119 29 8 chrX_random 425059 425535 -8873471 + L1PA13 LINE L1 5668 6155 -8 3640 225 8 27 chrX_random 425541 426430 -8872576 + L1P LINE L1 3773 4644 -1502 1242 251 78 15 chrX_random 426431 426826 -8872180 - L1PA13 LINE L1 -5143 1644 1225 204 125 0 0 chrX_random 427086 427118 -8871888 + (CATA)n Simple_repeat Simple_repeat 4 35 0 21 0 0 0 chrX_random 427135 427156 -8871850 + AT_rich Low_complexity Low_complexity 1 21 0 2447 62 0 13 chrX_random 429072 429376 -8869630 - AluY SINE Alu -3 308 9 752 207 89 0 chrX_random 430441 430692 -8868314 + L1MA9 LINE L1 5921 6290 -22 22 0 0 0 chrX_random 430692 430714 -8868292 + AT_rich Low_complexity Low_complexity 1 22 0 2400 78 10 0 chrX_random 430774 431069 -8867937 - AluY SINE Alu -13 298 1 338 329 151 23 chrX_random 431169 431388 -8867618 + MIR SINE MIR 10 256 -6 602 138 69 6 chrX_random 431671 431831 -8867175 + CT-rich Low_complexity Low_complexity 4 173 0 946 217 60 8 chrX_random 431895 432144 -8866862 - L1ME2 LINE L1 -146 6018 5757 2277 90 7 0 chrX_random 432147 432446 -8866560 - AluSg SINE Alu -9 301 1 801 257 48 0 chrX_random 432623 432833 -8866173 + MER58A DNA MER1_type 5 224 0 2536 181 67 109 chrX_random 432905 433672 -8865334 + MER50 LTR ERV1 1 734 0 2492 183 151 32 chrX_random 434115 434733 -8864273 - LTR8 LTR ERV1 0 691 1 252 339 17 26 chrX_random 436094 436209 -8862797 + L2 LINE L2 3158 3271 -1 1459 264 91 29 chrX_random 436224 436739 -8862267 - MLT1E LTR MaLR 0 593 47 955 203 81 88 chrX_random 436788 437221 -8861785 + LTR7 LTR ERV1 21 450 0 3741 81 41 30 chrX_random 437401 437417 -8861589 + MER4E LTR ERV1 1 15 -751 2179 113 0 3 chrX_random 437417 437709 -8861297 - AluSq SINE Alu -22 291 1 3741 81 41 30 chrX_random 437709 438258 -8860748 + MER4E LTR ERV1 15 572 -194 2616 41 0 10 chrX_random 438266 438580 -8860426 - AluY SINE Alu 0 311 1 374 216 22 52 chrX_random 438580 438714 -8860292 - LTR27 LTR ERV1 -207 429 300 765 237 17 11 chrX_random 438790 438967 -8860039 - LTR28 LTR ERV1 -842 178 1 1289 166 20 56 chrX_random 439146 439575 -8859431 + pTR5 LTR ERV1 738 1200 -1238 492 18 0 0 chrX_random 439886 439943 -8859063 + (TCTA)n Simple_repeat Simple_repeat 2 58 0 2971 165 31 16 chrX_random 439943 440457 -8858549 - LTR26B LTR ERV1 -7 524 3 270 0 0 0 chrX_random 440458 440488 -8858518 + (TG)n Simple_repeat Simple_repeat 2 31 0 550 202 26 9 chrX_random 441954 442068 -8856938 - MLT1J LTR MaLR -280 231 116 338 296 51 87 chrX_random 442115 442368 -8856638 - MIR SINE MIR -13 249 6 23 33 0 0 chrX_random 443774 443804 -8855202 + AT_rich Low_complexity Low_complexity 1 30 0 208 341 88 22 chrX_random 445969 446060 -8852946 - L2 LINE L2 -6 3266 3170 594 319 86 13 chrX_random 446630 446934 -8852072 + L2 LINE L2 1806 2131 -1183 2052 96 37 0 chrX_random 447052 447351 -8851655 - AluSp SINE Alu 0 309 1 662 295 5 5 chrX_random 447357 447557 -8851449 + MIR SINE MIR 63 262 0 2319 83 0 17 chrX_random 447889 448191 -8850815 - AluY SINE Alu -14 297 1 29 78 0 0 chrX_random 448684 448748 -8850258 + AT_rich Low_complexity Low_complexity 1 64 0 2319 94 0 0 chrX_random 450532 450829 -8848177 + AluSg SINE Alu 1 297 -13 5121 128 69 9 chrX_random 451219 452078 -8846928 + L1M1 LINE L1 1700 2609 -4956 3910 78 238 33 chrX_random 452094 452784 -8846222 + pTR5 LTR ERV1 1195 2025 -413 345 245 10 0 chrX_random 452784 452882 -8846124 + LTR30 LTR ERV1 544 642 -80 975 92 0 0 chrX_random 452882 453012 -8845994 + pTR5 LTR ERV1 66 195 -2243 1112 38 8 0 chrX_random 453483 453614 -8845392 + AluSq/x SINE Alu 1 132 -181 6298 194 16 69 chrX_random 453741 454975 -8844031 - L1MA3 LINE L1 0 6305 5007 1822 171 0 25 chrX_random 454975 455291 -8843715 - AluJb SINE Alu -4 308 1 6298 194 16 69 chrX_random 455291 455953 -8843053 - L1MA3 LINE L1 -1298 5007 4311 2393 85 0 22 chrX_random 455953 456270 -8842736 - AluY SINE Alu -1 310 1 6298 194 16 69 chrX_random 456270 457303 -8841703 - L1MA3 LINE L1 -1994 4311 3546 7485 142 43 13 chrX_random 457308 458511 -8840495 + L1P3 LINE L1 3 1286 -4876 189 74 0 0 chrX_random 458511 458538 -8840468 + (CAA)n Simple_repeat Simple_repeat 1 27 0 7485 142 43 13 chrX_random 458538 458686 -8840320 + L1P3 LINE L1 1286 1428 -4734 999 167 17 0 chrX_random 458955 459129 -8839877 + MSTD LTR MaLR 220 396 0 364 265 23 47 chrX_random 459391 459606 -8839400 + L1M4 LINE L1 2220 2429 -3717 2827 255 81 10 chrX_random 459622 460012 -8838994 - L1 LINE L1 -1519 4627 4266 2367 91 3 0 chrX_random 460012 460309 -8838697 - AluSp SINE Alu -15 298 1 2827 255 81 10 chrX_random 460309 461455 -8837551 - L1 LINE L1 -1880 4266 2865 7628 166 8 27 chrX_random 461456 464132 -8834874 + L1P3 LINE L1 169 2850 -3611 266 296 25 12 chrX_random 464260 464341 -8834665 - L2 LINE L2 -1890 1424 1343 327 203 0 0 chrX_random 464452 464526 -8834480 + L1P3 LINE L1 2339 2412 -4049 2283 118 0 0 chrX_random 465075 465372 -8833634 + AluSq SINE Alu 3 299 -14 22 94 0 0 chrX_random 465960 466024 -8832982 + AT_rich Low_complexity Low_complexity 1 64 0 36 40 0 0 chrX_random 466371 466421 -8832585 + AT_rich Low_complexity Low_complexity 1 50 0 181 292 214 0 chrX_random 466481 466570 -8832436 + L2 LINE L2 3164 3271 -1 1525 318 90 42 chrX_random 466720 466958 -8832048 - L2 LINE L2 -1 3312 3087 2394 77 3 22 chrX_random 466958 467271 -8831735 - AluSp SINE Alu -6 307 1 1525 318 90 42 chrX_random 467271 467509 -8831497 - L2 LINE L2 -226 3087 2862 5028 116 25 5 chrX_random 467509 468271 -8830735 - MER4E LTR ERV1 0 779 3 1525 318 90 42 chrX_random 468271 468552 -8830454 - L2 LINE L2 -451 2862 2596 2177 108 3 0 chrX_random 468552 468849 -8830157 + AluSc SINE Alu 1 298 -11 1525 318 90 42 chrX_random 468849 469349 -8829657 - L2 LINE L2 -717 2596 1995 1012 316 17 25 chrX_random 469349 469823 -8829183 - L2 LINE L2 -2746 568 25 22 0 0 0 chrX_random 470531 470553 -8828453 + AT_rich Low_complexity Low_complexity 1 22 0 288 344 61 24 chrX_random 470739 470986 -8828020 - L3 LINE CR1 -48 1529 1274 1513 178 45 75 chrX_random 471294 471670 -8827336 - MLT1A1 LTR MaLR 0 365 1 1881 178 28 0 chrX_random 471670 472025 -8826981 - MLT1A1-int LTR MaLR 0 1735 1371 1936 99 0 0 chrX_random 472031 472274 -8826732 - AluSg SINE Alu -67 243 1 3592 245 65 40 chrX_random 472274 472815 -8826191 - L1 LINE L1 -2684 3698 3172 2412 78 0 3 chrX_random 472815 473111 -8825895 - AluY SINE Alu -16 295 1 3592 245 65 40 chrX_random 473111 474305 -8824701 - L1 LINE L1 -3210 3172 1858 2340 80 33 0 chrX_random 474305 474606 -8824400 - AluY SINE Alu 0 311 1 3592 245 65 40 chrX_random 474606 475406 -8823600 - L1 LINE L1 -4524 1858 1080 2190 121 7 0 chrX_random 475410 475717 -8823289 + AluSc SINE Alu 1 309 0 553 376 29 21 chrX_random 475724 476104 -8822902 + L1PA13 LINE L1 2 384 -6403 276 392 7 7 chrX_random 476463 476616 -8822390 + L1PA13 LINE L1 1368 1520 -5267 435 324 33 17 chrX_random 477511 477752 -8821254 + L1PA13 LINE L1 1510 1754 -5033 2301 114 0 0 chrX_random 477753 478060 -8820946 + AluSx SINE Alu 6 312 0 734 102 8 0 chrX_random 478069 478187 -8820819 + (GGAAA)n Simple_repeat Simple_repeat 2 120 0 2720 196 86 15 chrX_random 479312 479987 -8819019 - L1MB5 LINE L1 -41 6133 5411 1059 217 78 45 chrX_random 480000 480359 -8818647 - L1MB5 LINE L1 -897 5249 4879 294 125 0 0 chrX_random 480361 480409 -8818597 + (TC)n Simple_repeat Simple_repeat 1 48 0 193 308 38 75 chrX_random 480442 480575 -8818431 + L2 LINE L2 2937 3064 -208 189 171 0 0 chrX_random 480838 480873 -8818133 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 186 43 0 0 chrX_random 480896 480919 -8818087 + (TG)n Simple_repeat Simple_repeat 1 23 0 180 0 0 0 chrX_random 480922 480942 -8818064 + (GA)n Simple_repeat Simple_repeat 2 21 0 24 53 0 0 chrX_random 482425 482463 -8816543 + AT_rich Low_complexity Low_complexity 1 38 0 1108 218 14 0 chrX_random 482559 482779 -8816227 + MER58A DNA MER1_type 2 224 0 1022 192 32 32 chrX_random 483005 483255 -8815751 - MER82 DNA MER2_type -403 250 1 1373 256 58 116 chrX_random 483258 483367 -8815639 - L1MD3 LINE L1 -746 7249 7135 2560 64 3 0 chrX_random 483367 483678 -8815328 - AluSx SINE Alu 0 312 1 1373 256 58 116 chrX_random 483678 484763 -8814243 - L1MD3 LINE L1 -860 7135 6125 1164 251 104 15 chrX_random 484845 484948 -8814058 - L1MCc LINE L1 -4271 2671 2579 342 0 0 0 chrX_random 484948 484986 -8814020 + (TG)n Simple_repeat Simple_repeat 2 39 0 1164 251 104 15 chrX_random 484986 485690 -8813316 - L1MCc LINE L1 -4363 2579 1352 6666 158 38 13 chrX_random 485793 487757 -8811249 + L1PA11 LINE L1 4196 6173 -1 664 224 89 12 chrX_random 488732 488914 -8810092 + MIR SINE MIR 9 197 -65 25 31 0 0 chrX_random 488954 488986 -8810020 + AT_rich Low_complexity Low_complexity 1 32 0 318 310 13 26 chrX_random 490267 490422 -8808584 + L1MC4 LINE L1 7890 8042 0 413 88 0 29 chrX_random 490577 490645 -8808361 + (CAGA)n Simple_repeat Simple_repeat 1 66 0 969 195 41 5 chrX_random 490646 490841 -8808165 - MSTB LTR MaLR 0 426 225 3296 251 40 16 chrX_random 491120 492692 -8806314 + L1PA13 LINE L1 30 2084 -4703 4312 150 18 0 chrX_random 492700 493425 -8805581 - L1PBb LINE L1 -5267 1596 859 684 289 44 7 chrX_random 493422 493720 -8805286 - L1PBb LINE L1 -6552 311 3 * 405 274 93 26 chrX_random 493746 494016 -8804990 + HAL1 LINE L1 1389 1676 -831 730 319 42 0 chrX_random 494177 494415 -8804591 - L2 LINE L2 -1342 1972 1725 252 313 119 23 chrX_random 494414 494590 -8804416 + L2 LINE L2 3120 3312 -1 * 334 245 9 47 chrX_random 494648 494754 -8804252 + HAL1 LINE L1 2246 2347 -160 23 0 0 0 chrX_random 495905 495928 -8803078 + AT_rich Low_complexity Low_complexity 1 23 0 2123 101 0 41 chrX_random 496090 496406 -8802600 + AluSg SINE Alu 1 303 -7 872 203 98 39 chrX_random 496547 496809 -8802197 + MER33 DNA MER1_type 2 286 -2299 2550 62 0 0 chrX_random 496809 497117 -8801889 + AluY SINE Alu 1 308 -3 872 203 98 39 chrX_random 497117 497159 -8801847 + MER33 DNA MER1_type 286 324 0 421 300 54 85 chrX_random 497655 497809 -8801197 + L2 LINE L2 2564 2721 -593 2303 85 0 3 chrX_random 497809 498104 -8800902 + AluSc SINE Alu 1 294 -15 421 300 54 85 chrX_random 498104 498359 -8800647 + L2 LINE L2 2721 2960 -354 862 240 101 30 chrX_random 499449 499815 -8799191 + MLT1J2 LTR MaLR 59 450 0 2514 27 0 0 chrX_random 499909 500202 -8798804 + L1PA4 LINE L1 5855 6147 -8 445 305 14 35 chrX_random 500259 500400 -8798606 + L2 LINE L2 3175 3312 -1 189 167 0 0 chrX_random 500451 500505 -8798501 + (TA)n Simple_repeat Simple_repeat 1 54 0 279 0 0 0 chrX_random 501534 501565 -8797441 + (TG)n Simple_repeat Simple_repeat 2 32 0 2234 115 0 0 chrX_random 502182 502478 -8796528 - AluSg SINE Alu -14 296 1 233 714 0 0 chrX_random 502538 502692 -8796314 + (CA)n Simple_repeat Simple_repeat 1 154 0 1894 169 125 10 chrX_random 502695 503079 -8795927 + MSTA LTR MaLR 1 428 0 198 103 0 0 chrX_random 503928 503957 -8795049 + (A)n Simple_repeat Simple_repeat 1 29 0 2007 100 64 4 chrX_random 504119 504399 -8794607 + AluSg SINE Alu 1 297 -13 391 255 174 24 chrX_random 504404 504726 -8794280 - MLT1L LTR MaLR -143 472 23 339 305 8 8 chrX_random 505075 505203 -8793803 + LTR67 LTR ERVL 425 552 -5 3234 158 6 6 chrX_random 506630 507180 -8791826 - L1PA15 LINE L1 0 6165 5616 3026 181 33 76 chrX_random 507204 508496 -8790510 + L1P4 LINE L1 4369 5589 -576 336 211 58 58 chrX_random 508794 508898 -8790108 + MIR3 SINE MIR 90 193 -15 292 335 112 12 chrX_random 509572 509733 -8789273 + MIR SINE MIR 35 211 -51 223 262 41 8 chrX_random 510029 510151 -8788855 + (TA)n Simple_repeat Simple_repeat 2 127 0 562 303 47 25 chrX_random 510184 510501 -8788505 - L1ME LINE L1 -414 5707 5384 24 0 0 0 chrX_random 510632 510656 -8788350 + AT_rich Low_complexity Low_complexity 1 24 0 26 0 0 0 chrX_random 510675 510701 -8788305 + AT_rich Low_complexity Low_complexity 1 26 0 2097 194 60 2 chrX_random 510869 511267 -8787739 + MSTB LTR MaLR 2 422 -4 2532 210 2 26 chrX_random 511272 511620 -8787386 + MSTB-int LTR MaLR 2 334 -1317 2257 112 7 0 chrX_random 511620 511925 -8787081 + AluSp SINE Alu 1 307 -6 2532 210 2 26 chrX_random 511925 512118 -8786888 + MSTB-int LTR MaLR 334 530 -1121 2280 113 6 38 chrX_random 512126 512472 -8786534 - THE1B LTR MaLR 0 364 30 1630 240 3 9 chrX_random 512472 512818 -8786188 + MSTB-int LTR MaLR 552 895 -756 592 109 11 0 chrX_random 512818 512910 -8786096 + AluSp/q SINE Alu 217 309 -4 877 252 0 0 chrX_random 512910 513120 -8785886 + MSTB-int LTR MaLR 338 547 -1104 1798 236 187 11 chrX_random 513149 513684 -8785322 + MSTB-int LTR MaLR 839 1467 -113 25 0 0 0 chrX_random 513721 513746 -8785260 + AT_rich Low_complexity Low_complexity 1 25 0 2321 70 0 3 chrX_random 514182 514467 -8784539 + AluY SINE Alu 1 284 -27 23 54 0 0 chrX_random 514740 514777 -8784229 + AT_rich Low_complexity Low_complexity 1 37 0 876 317 155 9 chrX_random 515519 515985 -8783021 + MLT1G1 LTR MaLR 10 584 -11 41 21 0 0 chrX_random 516097 516145 -8782861 + AT_rich Low_complexity Low_complexity 1 48 0 1290 140 26 52 chrX_random 516312 516352 -8782654 - MER44D DNA MER2_type -1957 534 494 2600 100 5 21 chrX_random 516352 516733 -8782273 - THE1C LTR MaLR 0 375 1 1290 140 26 52 chrX_random 516733 516963 -8782043 - MER44D DNA MER2_type -1997 494 1 385 272 160 0 chrX_random 517049 517218 -8781788 - MLT1H1 LTR MaLR 0 567 372 624 248 105 39 chrX_random 517236 517588 -8781418 - MSTB2 LTR MaLR 0 457 11 604 262 49 79 chrX_random 517601 517987 -8781019 - MLT1H1 LTR MaLR -214 376 1 25 31 0 0 chrX_random 518025 518057 -8780949 + AT_rich Low_complexity Low_complexity 1 32 0 1901 143 34 3 chrX_random 518427 518748 -8780258 - HSMAR2 DNA Mariner -2 1300 970 510 113 45 38 chrX_random 518751 518884 -8780122 + CT-rich Low_complexity Low_complexity 2 135 0 1897 132 35 0 chrX_random 518896 519184 -8779822 - AluSx SINE Alu -12 300 3 3055 159 10 33 chrX_random 519211 520126 -8778880 - HSMAR2 DNA Mariner -334 968 2 2108 123 3 23 chrX_random 520613 520923 -8778083 + AluSx SINE Alu 1 304 -8 22 0 0 0 chrX_random 522157 522179 -8776827 + AT_rich Low_complexity Low_complexity 1 22 0 314 317 117 8 chrX_random 522226 522346 -8776660 + L2 LINE L2 3134 3266 -6 2443 147 2 5 chrX_random 522597 523011 -8775995 - L1PA16 LINE L1 -9 6157 5745 300 250 102 0 chrX_random 523406 523494 -8775512 + L1MC4 LINE L1 6607 6703 -1339 2384 89 0 10 chrX_random 524042 524355 -8774651 - AluSg SINE Alu 0 310 1 1952 223 86 4 chrX_random 524662 525129 -8773877 + MLT1D LTR MaLR 1 505 0 4267 167 18 18 chrX_random 525838 526611 -8772395 + MER21A-int LTR ERV1 3419 4191 0 419 184 40 17 chrX_random 526631 526805 -8772201 + (TA)n Simple_repeat Simple_repeat 1 178 0 1484 162 37 5 chrX_random 526813 527251 -8771755 + MER21A LTR ERV1 16 487 -376 2312 83 3 3 chrX_random 527251 527553 -8771453 + AluY SINE Alu 1 302 -9 23 0 0 0 chrX_random 527630 527653 -8771353 + AT_rich Low_complexity Low_complexity 1 23 0 1961 154 0 3 chrX_random 527838 528149 -8770857 + AluJb SINE Alu 1 310 -2 2270 246 73 18 chrX_random 528490 529275 -8769731 - MER69 DNA AcHobo 0 2526 1689 650 183 30 23 chrX_random 529275 529406 -8769600 - FLAM_C SINE Alu -1 132 1 2270 246 73 18 chrX_random 529406 529463 -8769543 - MER69 DNA AcHobo -837 1689 1637 732 147 1 7 chrX_random 529484 529614 -8769392 - L1MA9 LINE L1 -213 5951 5828 463 151 19 145 chrX_random 529622 529781 -8769225 + L1MA9 LINE L1 5959 6097 -215 313 202 18 64 chrX_random 529785 529894 -8769112 - MER69 DNA AcHobo -918 1608 1505 1215 250 7 3 chrX_random 529920 530220 -8768786 + L1 LINE L1 2535 2835 -3311 829 194 131 84 chrX_random 530229 530596 -8768410 + LTR7 LTR ERV1 34 417 -33 1725 185 129 29 chrX_random 530609 531026 -8767980 + HERVH LTR ERV1 1 459 -7254 6231 206 26 49 chrX_random 531084 533334 -8765672 + HERVH LTR ERV1 590 2658 -4028 2316 225 17 29 chrX_random 533336 533918 -8765088 + L1MCb LINE L1 575 1149 -4896 275 297 35 104 chrX_random 534244 534446 -8764560 + L2 LINE L2 344 531 -2783 258 256 78 22 chrX_random 534449 534539 -8764467 + L1MC3 LINE L1 5502 5596 -525 24 0 0 0 chrX_random 534601 534625 -8764381 + AT_rich Low_complexity Low_complexity 1 24 0 272 256 98 0 chrX_random 534693 534775 -8764231 + L1MC3 LINE L1 5759 5848 -1960 932 107 40 0 chrX_random 534795 534945 -8764061 - L1MA9 LINE L1 -1 6311 6156 25 0 0 0 chrX_random 535212 535237 -8763769 + AT_rich Low_complexity Low_complexity 1 25 0 238 292 31 21 chrX_random 535272 535368 -8763638 + L2 LINE L2 565 661 -2653 2384 84 3 7 chrX_random 535798 536108 -8762898 + AluSc SINE Alu 1 309 0 3475 231 132 56 chrX_random 537235 538823 -8760183 + L1MCa LINE L1 21 1815 -4611 572 257 53 15 chrX_random 538828 539029 -8759977 + L1MC3 LINE L1 6014 6223 -1558 1535 150 39 39 chrX_random 539029 539390 -8759616 + L1MA6 LINE L1 5940 6300 0 1981 105 8 0 chrX_random 539513 539779 -8759227 - AluSp SINE Alu -45 268 1 314 347 58 33 chrX_random 539966 540240 -8758766 + L1M3 LINE L1 3904 4184 -1962 1722 173 13 21 chrX_random 540252 540381 -8758625 - L1 LINE L1 -1697 4449 4320 2563 59 0 0 chrX_random 540381 540686 -8758320 - AluY SINE Alu -5 306 2 1722 173 13 21 chrX_random 540686 540932 -8758074 - L1 LINE L1 -1826 4320 4077 3444 183 23 48 chrX_random 540936 542306 -8756700 + L1M3 LINE L1 4456 5793 -541 272 202 48 42 chrX_random 542306 542474 -8756532 + (TA)n Simple_repeat Simple_repeat 2 170 0 539 143 6 37 chrX_random 542482 542620 -8756386 + L1MA9 LINE L1 5664 5791 -383 1369 181 34 15 chrX_random 542645 542955 -8756051 + L1MA9 LINE L1 5760 6092 -76 940 141 82 0 chrX_random 543148 543318 -8755688 + LTR47A LTR ERVL 261 444 -8 1537 135 34 69 chrX_random 543320 543404 -8755602 + L1MA10 LINE L1 5998 6083 -251 2832 140 4 15 chrX_random 543404 543867 -8755139 + LTR22A LTR ERVK 1 458 0 1537 135 34 69 chrX_random 543867 544131 -8754875 + L1MA10 LINE L1 6083 6334 0 2082 126 0 17 chrX_random 544372 544674 -8754332 + AluSq SINE Alu 1 297 -16 2079 104 46 0 chrX_random 544919 545199 -8753807 - AluSg SINE Alu -15 295 3 21 0 0 0 chrX_random 545435 545456 -8753550 + AT_rich Low_complexity Low_complexity 1 21 0 956 102 0 8 chrX_random 545564 545732 -8753274 - AluSp/q SINE Alu 0 322 156 2321 92 0 3 chrX_random 545935 546241 -8752765 + AluSg SINE Alu 1 305 -5 1866 113 11 11 chrX_random 546243 546525 -8752481 + AluSc SINE Alu 1 282 -27 189 0 0 0 chrX_random 548042 548063 -8750943 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 207 69 0 0 chrX_random 548069 548098 -8750908 + (TG)n Simple_repeat Simple_repeat 2 30 0 1675 68 147 15 chrX_random 548103 548394 -8750612 - AluY SINE Alu 0 327 2 2142 105 17 14 chrX_random 548703 548999 -8750007 - AluSx SINE Alu -15 297 1 3778 84 19 9 chrX_random 549471 550351 -8748655 - L1PA11 LINE L1 -388 5780 4895 2556 82 41 0 chrX_random 550351 550707 -8748299 + L1PA11 LINE L1 5793 6171 -3 25347 101 12 45 chrX_random 551216 557628 -8741378 - L1PA7 LINE L1 -1 6153 12 463 315 49 11 chrX_random 558690 558874 -8740132 - MIR SINE MIR -10 252 62 22 0 0 0 chrX_random 559980 560002 -8739004 + AT_rich Low_complexity Low_complexity 1 22 0 2572 249 62 29 chrX_random 560245 561252 -8737754 + L1ME1 LINE L1 5122 6160 -6 231 170 0 0 chrX_random 561941 561988 -8737018 + (CA)n Simple_repeat Simple_repeat 2 48 0 754 208 27 0 chrX_random 563314 563497 -8735509 + L1MA9 LINE L1 5898 6085 -227 2047 157 19 22 chrX_random 563497 563643 -8735363 - MER39 LTR ERV1 0 707 562 4157 181 124 16 chrX_random 563643 564564 -8734442 + LTR28 LTR ERV1 1 1020 0 2047 157 19 22 chrX_random 564564 564786 -8734220 - MER39 LTR ERV1 -145 562 340 1159 187 139 4 chrX_random 564787 565038 -8733968 - MER39 LTR ERV1 -421 286 2 1347 90 85 0 chrX_random 565039 565250 -8733756 + L1MA9 LINE L1 6081 6309 -3 587 321 34 19 chrX_random 565263 565472 -8733534 + MIR SINE MIR 1 212 -50 512 262 134 0 chrX_random 565807 565979 -8733027 - MIR SINE MIR 0 262 68 3625 111 0 4 chrX_random 565987 566500 -8732506 - MER9 LTR ERVK 0 511 1 1000 171 0 33 chrX_random 566547 566728 -8732278 - AluSx SINE Alu -1 311 137 650 161 42 42 chrX_random 566728 566871 -8732135 - MER39 LTR ERV1 -159 548 406 321 195 53 0 chrX_random 566996 567071 -8731935 - MER39 LTR ERV1 -309 398 182 976 133 0 0 chrX_random 567121 567256 -8731750 - AluSx SINE Alu -178 135 1 185 318 121 35 chrX_random 567268 567441 -8731565 - MIR SINE MIR -12 250 63 31 58 0 0 chrX_random 567509 567561 -8731445 + AT_rich Low_complexity Low_complexity 1 52 0 830 133 53 0 chrX_random 567744 567894 -8731112 + L1MA9 LINE L1 6155 6312 0 396 138 0 0 chrX_random 569563 569628 -8729378 + (CA)n Simple_repeat Simple_repeat 2 66 0 426 300 75 36 chrX_random 569942 570618 -8728388 + L1MEc LINE L1 908 1654 -4656 828 268 63 24 chrX_random 571658 572038 -8726968 + Charlie4a DNA MER1_type 24 418 -90 1616 168 3 49 chrX_random 572262 572566 -8726440 + AluJo SINE Alu 2 291 -21 183 255 98 49 chrX_random 573456 573558 -8725448 + L2 LINE L2 2410 2516 -798 1262 260 26 36 chrX_random 573588 573976 -8725030 + LTR16A LTR ERVL 54 437 -13 1963 113 13 37 chrX_random 574068 574368 -8724638 - AluSx SINE Alu 0 312 20 475 209 0 0 chrX_random 574721 574807 -8724199 + LTR16C LTR ERVL 403 488 -3 900 203 32 69 chrX_random 574837 575054 -8723952 + MER58A DNA MER1_type 1 209 -15 2505 137 10 2 chrX_random 575805 576208 -8722798 - L1P4 LINE L1 -401 5765 5360 374 200 0 38 chrX_random 576199 576279 -8722727 - L1PB4 LINE L1 -39 6117 6041 * 3995 97 51 6 chrX_random 576293 576915 -8722091 + L1MA1 LINE L1 5646 6295 -7 437 117 0 0 chrX_random 576929 576989 -8722017 + U6 snRNA snRNA 48 107 0 304 304 0 0 chrX_random 577010 577125 -8721881 + L1MA9 LINE L1 6159 6273 -39 471 302 0 0 chrX_random 577443 577559 -8721447 + MIR SINE MIR 29 144 -118 6117 142 16 13 chrX_random 577575 578542 -8720464 + THE1C-int LTR MaLR 612 1580 0 2598 106 8 16 chrX_random 578542 578920 -8720086 + THE1C LTR MaLR 1 375 0 8861 187 19 2 chrX_random 578926 581255 -8717751 + L1P5 LINE L1 3426 5795 -356 284 76 86 9 chrX_random 581255 581360 -8717646 + (TA)n Simple_repeat Simple_repeat 2 114 0 4759 197 51 3 chrX_random 582811 583856 -8715150 - L1 LINE L1 -1279 5049 3955 2861 255 59 44 chrX_random 583982 585203 -8713803 - L1 LINE L1 -4101 1227 540 886 353 16 36 chrX_random 586103 586545 -8712461 - L1 LINE L1 -5521 728 296 872 138 22 22 chrX_random 587603 587784 -8711222 + L1MA8 LINE L1 6105 6285 -6 208 370 158 5 chrX_random 588560 588744 -8710262 - MIR SINE MIR 0 262 51 299 316 21 11 chrX_random 589859 589978 -8709028 + MIR SINE MIR 34 153 -64 418 243 82 67 chrX_random 590037 590122 -8708884 + L1MC5 LINE L1 7510 7592 -369 360 0 0 0 chrX_random 590122 590162 -8708844 + (CA)n Simple_repeat Simple_repeat 2 41 0 418 243 82 67 chrX_random 590162 590344 -8708662 + L1MC5 LINE L1 7592 7781 -180 1797 163 28 48 chrX_random 590511 590866 -8708140 + MLT1B LTR MaLR 1 348 -42 255 224 0 0 chrX_random 590909 590967 -8708039 - MER92A LTR ERV1 0 412 355 1305 266 32 24 chrX_random 591222 591631 -8707375 - MER92A LTR ERV1 0 412 1 207 351 0 0 chrX_random 591705 591779 -8707227 + MIR SINE MIR 177 250 -12 260 254 0 0 chrX_random 591824 591879 -8707127 - MER5A DNA MER1_type -7 182 128 478 154 73 18 chrX_random 591893 592003 -8707003 + MER4C LTR ERV1 1 116 -349 944 228 69 67 chrX_random 592085 592548 -8706458 + LTR34 LTR ERV1 136 694 -5 1317 178 89 43 chrX_random 593769 593926 -8705080 + LTR48 LTR ERV1 41 189 -598 2144 127 16 47 chrX_random 593926 594313 -8704693 + THE1C LTR MaLR 1 375 0 1317 178 89 43 chrX_random 594313 594685 -8704321 + LTR48 LTR ERV1 189 754 -33 228 135 0 0 chrX_random 594713 594750 -8704256 + (T)n Simple_repeat Simple_repeat 1 37 0 2236 182 66 22 chrX_random 594776 595264 -8703742 + LTR22 LTR ERVK 1 509 0 1492 211 4 0 chrX_random 595267 595527 -8703479 - AluJb SINE Alu -51 261 1 224 261 0 0 chrX_random 596054 596100 -8702906 + MIR SINE MIR 58 103 -105 2195 121 11 11 chrX_random 596263 596618 -8702388 - THE1A LTR MaLR 0 355 1 547 245 50 91 chrX_random 597059 597405 -8701601 - LTR35 LTR ERV1 0 675 351 2678 123 51 35 chrX_random 597731 597853 -8701153 - L1PA16 LINE L1 -2 6164 6045 2572 40 0 3 chrX_random 597853 598153 -8700853 + AluY SINE Alu 1 299 -12 2678 123 51 35 chrX_random 598153 598517 -8700489 - L1PA16 LINE L1 -121 6045 5670 550 68 14 0 chrX_random 598517 598590 -8700416 + L1PA16 LINE L1 5579 5652 -514 1670 172 31 3 chrX_random 599806 600125 -8698881 - L1MB1 LINE L1 0 6168 5841 1793 179 82 26 chrX_random 600128 600591 -8698415 - L1MB1 LINE L1 -1793 4353 3865 23 33 0 0 chrX_random 601374 601404 -8697602 + AT_rich Low_complexity Low_complexity 1 30 0 1804 109 0 4 chrX_random 602972 603237 -8695769 + L1PB1 LINE L1 5887 6150 -1 1141 241 15 37 chrX_random 603800 603939 -8695067 + MLT1E LTR MaLR 328 461 -132 2132 63 8 8 chrX_random 603939 604251 -8694755 + AluSg1 SINE Alu 1 278 -31 1141 241 15 37 chrX_random 604251 604380 -8694626 + MLT1E LTR MaLR 461 591 -2 199 328 16 0 chrX_random 604532 604593 -8694413 + L2 LINE L2 3200 3261 -11 2255 102 3 0 chrX_random 604626 604920 -8694086 - AluSc SINE Alu -14 295 1 1534 179 48 3 chrX_random 605002 605293 -8693713 + AluJb SINE Alu 1 304 -8 211 133 0 22 chrX_random 605396 605441 -8693565 + (CAAAA)n Simple_repeat Simple_repeat 3 46 0 936 193 3 7 chrX_random 605700 605917 -8693089 - L1MB5 LINE L1 -1 6179 5963 * 1450 209 23 43 chrX_random 605903 606252 -8692754 + L1MB5 LINE L1 5825 6166 -8 671 173 126 37 chrX_random 606276 606467 -8692539 + L1MC2 LINE L1 6137 6344 0 1773 67 25 0 chrX_random 606507 606745 -8692261 - L1PA7 LINE L1 0 6154 5911 2070 184 38 11 chrX_random 606962 607467 -8691539 + LTR69 LTR ERVL 9 588 0 306 149 50 14 chrX_random 608583 608724 -8690282 + (TA)n Simple_repeat Simple_repeat 1 146 0 225 157 78 0 chrX_random 608733 608784 -8690222 + (TATAG)n Simple_repeat Simple_repeat 3 57 0 212 132 26 40 chrX_random 608786 608862 -8690144 + (TTATA)n Simple_repeat Simple_repeat 5 79 0 531 258 220 32 chrX_random 608949 609360 -8689646 + MLT1G1 LTR MaLR 87 595 0 21 36 0 0 chrX_random 610015 610043 -8688963 + AT_rich Low_complexity Low_complexity 1 28 0 216 0 0 0 chrX_random 610430 610454 -8688552 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 923 198 6 6 chrX_random 610800 610982 -8688024 + MLT1D LTR MaLR 324 505 0 4598 159 27 7 chrX_random 611152 611976 -8687030 + L1MC1 LINE L1 5289 6128 -205 7717 186 77 35 chrX_random 611976 613629 -8685377 + L1M1 LINE L1 16 1738 -5827 904 177 0 0 chrX_random 613630 613788 -8685218 - L1P LINE L1 -1208 4938 4781 8725 152 31 50 chrX_random 613794 615488 -8683518 - L1P LINE L1 -1901 4245 2583 686 312 106 30 chrX_random 616077 616446 -8682560 - MLT1I LTR MaLR -1 408 12 236 256 64 26 chrX_random 616846 616924 -8682082 + MLT1L LTR MaLR 1 81 -534 22 35 0 0 chrX_random 617295 617324 -8681682 + AT_rich Low_complexity Low_complexity 1 29 0 1300 255 46 19 chrX_random 618118 618491 -8680515 - LTR10C LTR ERV1 -21 570 188 802 93 0 44 chrX_random 618511 618694 -8680312 + (TA)n Simple_repeat Simple_repeat 2 176 0 507 28 45 73 chrX_random 618719 618896 -8680110 + (TA)n Simple_repeat Simple_repeat 1 172 0 198 83 55 55 chrX_random 618913 619022 -8679984 + (TA)n Simple_repeat Simple_repeat 1 109 0 216 355 0 0 chrX_random 619698 619760 -8679246 - MER5A DNA MER1_type -51 138 77 3930 52 17 0 chrX_random 619763 620245 -8678761 + LTR2B LTR ERV1 1 490 0 3659 149 17 8 chrX_random 620496 621092 -8677914 + L1PA12 LINE L1 1 601 -6980 4857 117 25 21 chrX_random 621093 621869 -8677137 + MER4E LTR ERV1 1 779 0 1261 148 30 48 chrX_random 621870 621931 -8677075 + L1MA10 LINE L1 6069 6130 -204 2043 107 3 3 chrX_random 621931 622220 -8676786 + AluSg SINE Alu 1 289 -21 1261 148 30 48 chrX_random 622220 622428 -8676578 + L1MA10 LINE L1 6130 6333 -1 454 365 11 11 chrX_random 623166 623355 -8675651 - MER5A DNA MER1_type 0 189 1 398 259 231 0 chrX_random 623365 623512 -8675494 - MER5A DNA MER1_type -5 184 4 3422 174 42 30 chrX_random 625066 625779 -8673227 - LTR8A LTR ERV1 -5 722 1 35 24 0 0 chrX_random 625795 625837 -8673169 + AT_rich Low_complexity Low_complexity 1 42 0 251 133 17 17 chrX_random 625856 625916 -8673090 - LTR66 LTR ERVL -171 439 380 204 97 0 0 chrX_random 625923 625954 -8673052 + (TG)n Simple_repeat Simple_repeat 1 31 0 4214 144 39 3 chrX_random 626600 627275 -8671731 - MER50 LTR ERV1 -35 699 1 529 351 128 26 chrX_random 629001 629460 -8669546 - L2 LINE L2 -352 2962 2457 300 308 53 15 chrX_random 630522 630655 -8668351 - MIR SINE MIR -6 256 119 421 323 27 42 chrX_random 631018 631352 -8667654 + HAL1 LINE L1 745 1073 -1434 204 200 0 40 chrX_random 631939 631989 -8667017 + (TATG)n Simple_repeat Simple_repeat 1 48 0 294 328 31 86 chrX_random 632231 632487 -8666519 + MIR SINE MIR 19 260 -2 676 121 40 0 chrX_random 632708 632832 -8666174 + L1PB3 LINE L1 6022 6150 -4 288 318 46 26 chrX_random 632833 632984 -8666022 + L3b LINE CR1 1308 1461 -122 342 355 95 28 chrX_random 634158 634547 -8664459 - L1ME3A LINE L1 -223 5947 5533 356 269 81 51 chrX_random 634582 634779 -8664227 - L1ME3A LINE L1 -772 5374 5172 2015 129 10 3 chrX_random 634899 635208 -8663798 + AluSq SINE Alu 3 313 0 1619 209 40 3 chrX_random 635223 635823 -8663183 - L1MC/D LINE L1 -743 5403 4968 896 118 0 0 chrX_random 635824 635943 -8663063 - AluSp SINE Alu -58 255 137 368 252 10 0 chrX_random 635949 636052 -8662954 - L1MC/D LINE L1 -1637 4509 4406 2246 136 8 30 chrX_random 636087 636417 -8662589 - MER46B DNA MER2_type -2495 236 38 699 220 0 0 chrX_random 636417 636549 -8662457 - FLAM_A SINE Alu 0 133 2 2246 136 8 30 chrX_random 636549 636587 -8662419 - MER46B DNA MER2_type -2693 38 1 752 272 43 11 chrX_random 636598 636877 -8662129 - L1MC/D LINE L1 -1777 4369 4082 353 202 121 10 chrX_random 636880 636979 -8662027 - L1 LINE L1 -2024 4122 4013 1457 97 5 5 chrX_random 636980 637176 -8661830 - AluSc SINE Alu -5 304 109 330 80 0 0 chrX_random 640399 640449 -8658557 + (TTCA)n Simple_repeat Simple_repeat 4 53 0 1133 147 15 15 chrX_random 640533 640730 -8658276 + AluJb SINE Alu 112 308 -4 22 35 0 0 chrX_random 641284 641313 -8657693 + AT_rich Low_complexity Low_complexity 1 29 0 598 228 8 16 chrX_random 641356 641483 -8657523 + FLAM_A SINE Alu 2 127 -6 2269 106 0 0 chrX_random 641488 641791 -8657215 + AluSc SINE Alu 1 303 -6 22 35 0 0 chrX_random 642749 642778 -8656228 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chrX_random 643236 643257 -8655749 + AT_rich Low_complexity Low_complexity 1 21 0 261 162 176 0 chrX_random 643257 643331 -8655675 - L1MA7 LINE L1 -4 6287 6201 4912 152 46 20 chrX_random 643394 644456 -8654550 - L1MA7 LINE L1 -96 6195 5117 * 5123 206 27 4 chrX_random 644439 645603 -8653403 - L1MA7 LINE L1 -1633 4513 3324 24 32 0 0 chrX_random 645605 645636 -8653370 + AT_rich Low_complexity Low_complexity 1 31 0 421 277 31 5 chrX_random 645711 645906 -8653100 + L1M4 LINE L1 4339 4538 -1608 305 56 0 0 chrX_random 646162 646198 -8652808 - U2 snRNA snRNA -152 36 1 267 377 115 0 chrX_random 646216 646338 -8652668 - L2 LINE L2 -11 3261 3126 672 263 0 0 chrX_random 646429 646585 -8652421 - MLT1E1 LTR MaLR 0 654 499 51 42 0 0 chrX_random 646640 646712 -8652294 + AT_rich Low_complexity Low_complexity 1 72 0 672 166 14 7 chrX_random 648377 648516 -8650490 - L1MB7 LINE L1 -303 5881 5742 2387 196 29 0 chrX_random 648900 649455 -8649551 - L1MB7 LINE L1 -424 5750 5181 2295 202 77 5 chrX_random 649458 649497 -8649509 - MLT2B2 LTR ERVL -1 514 479 336 102 0 0 chrX_random 649497 649546 -8649460 + (TAGA)n Simple_repeat Simple_repeat 2 50 0 2295 202 77 5 chrX_random 649546 649861 -8649145 - MLT2B2 LTR ERVL -36 479 119 1927 87 0 4 chrX_random 649861 650114 -8648892 - AluSq SINE Alu -53 260 9 2295 202 77 5 chrX_random 650114 650199 -8648807 - MLT2B2 LTR ERVL -396 119 42 341 67 0 0 chrX_random 650203 650248 -8648758 - MADE1 DNA Mariner -35 45 1 3034 285 42 68 chrX_random 650261 651874 -8647132 - L1M4 LINE L1 -4971 1571 2 193 330 33 22 chrX_random 652701 652792 -8646214 - L2 LINE L2 -43 3270 3179 207 375 39 16 chrX_random 653378 653506 -8645500 - L2 LINE L2 -570 2744 2614 18310 169 15 15 chrX_random 654098 654900 -8644106 - L1PA13 LINE L1 -9 7592 6792 1988 198 84 15 chrX_random 654900 655376 -8643630 + LTR22 LTR ERVK 1 509 0 18310 169 15 15 chrX_random 655376 657887 -8641119 - L1PA13 LINE L1 -809 6792 4272 2293 108 0 0 chrX_random 657887 658182 -8640824 - AluSc SINE Alu -14 295 1 18310 169 15 15 chrX_random 658182 659300 -8639706 - L1PA13 LINE L1 -3329 4272 3156 5715 254 35 39 chrX_random 659271 661546 -8637460 - L1PA13 LINE L1 -4762 2822 10 * 1200 96 23 0 chrX_random 661551 661728 -8637278 + L1MA5 LINE L1 6115 6295 -5 264 123 78 19 chrX_random 662347 662501 -8636505 + (TA)n Simple_repeat Simple_repeat 1 163 0 4697 236 32 43 chrX_random 663378 663899 -8635107 + L1MC3 LINE L1 6341 6866 -919 1622 143 43 16 chrX_random 663899 664157 -8634849 + AluJo SINE Alu 1 265 -47 4697 236 32 43 chrX_random 664157 665074 -8633932 + L1MC3 LINE L1 6866 7763 -22 1594 168 96 6 chrX_random 665446 665779 -8633227 - MLT1A1 LTR MaLR -2 363 1 297 304 205 0 chrX_random 665840 665952 -8633054 - MER5A DNA MER1_type -3 186 52 836 202 17 17 chrX_random 665967 666145 -8632861 + MER5A DNA MER1_type 12 189 0 380 288 100 19 chrX_random 666156 666316 -8632690 + MER5B DNA MER1_type 5 177 -1 204 342 13 0 chrX_random 667356 667435 -8631571 - MIR SINE MIR -13 249 170 353 285 47 52 chrX_random 667488 667681 -8631325 + L2 LINE L2 3102 3293 -20 465 223 7 14 chrX_random 667685 667833 -8631173 + GA-rich Low_complexity Low_complexity 2 148 0 753 142 11 68 chrX_random 668340 668519 -8630487 - LTR49 LTR ERV1 -462 133 1 23 0 0 0 chrX_random 671849 671872 -8627134 + AT_rich Low_complexity Low_complexity 1 23 0 688 121 0 0 chrX_random 672511 672602 -8626404 - MER8 DNA MER2_type 0 239 149 2337 88 0 0 chrX_random 672603 672918 -8626088 + AluSq SINE Alu 1 315 0 5306 90 6 0 chrX_random 672918 673642 -8625364 + L1PA11 LINE L1 5431 6158 -16 4353 164 36 27 chrX_random 673668 674305 -8624701 - L1MA5 LINE L1 -175 6125 5495 180 0 0 0 chrX_random 674305 674325 -8624681 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 4353 164 36 27 chrX_random 674325 675014 -8623992 - L1MA5 LINE L1 -805 5495 4782 26 0 0 0 chrX_random 675184 675210 -8623796 + AT_rich Low_complexity Low_complexity 1 26 0 21 57 0 0 chrX_random 675453 675488 -8623518 + AT_rich Low_complexity Low_complexity 1 35 0 21 36 0 0 chrX_random 675848 675876 -8623130 + AT_rich Low_complexity Low_complexity 1 28 0 230 139 0 0 chrX_random 676043 676079 -8622927 - MLT2C1 LTR ERVL -7 390 355 * 704 250 5 72 chrX_random 676072 676280 -8622726 - MLT2B1 LTR ERVL -93 427 234 6896 194 43 3 chrX_random 676280 678074 -8620932 - ERVL LTR ERVL -2917 2847 933 32 67 0 0 chrX_random 678235 678295 -8620711 + AT_rich Low_complexity Low_complexity 1 60 0 585 311 19 35 chrX_random 678993 679351 -8619655 + L1MB1 LINE L1 1356 1938 -5548 485 141 0 0 chrX_random 679647 679718 -8619288 - LTR8 LTR ERV1 -123 568 498 723 185 0 23 chrX_random 679732 679862 -8619144 - LTR8 LTR ERV1 -564 127 1 390 290 124 16 chrX_random 679881 680067 -8618939 + L1MB1 LINE L1 2774 2979 -4588 2831 126 93 27 chrX_random 680082 680661 -8618345 - MER4B LTR ERV1 0 779 1 7344 239 47 15 chrX_random 680664 681016 -8617990 + L1MB1 LINE L1 3069 3408 -4157 183 114 0 0 chrX_random 681016 681051 -8617955 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 7344 239 47 15 chrX_random 681051 683271 -8615735 + L1MB1 LINE L1 3408 5737 -1828 5409 178 7 7 chrX_random 683276 685047 -8613959 - L1MA4 LINE L1 -23 6459 4689 * 6286 159 15 71 chrX_random 685042 685760 -8613246 - L1MA4 LINE L1 -4119 1209 591 2285 155 57 5 chrX_random 685760 686167 -8612839 + MSTA LTR MaLR 1 428 0 6286 159 15 71 chrX_random 686167 686713 -8612293 - L1MA4 LINE L1 -4737 591 16 3934 234 28 5 chrX_random 686715 687704 -8611302 + L1MB1 LINE L1 5740 6751 -814 4009 169 43 20 chrX_random 689719 690238 -8608768 + L1MB1 LINE L1 6732 7238 -349 2023 117 0 7 chrX_random 690238 690520 -8608486 + AluSx SINE Alu 27 306 -6 186 43 0 0 chrX_random 690520 690543 -8608463 + (GA)n Simple_repeat Simple_repeat 2 24 0 4009 169 43 20 chrX_random 690543 690857 -8608149 + L1MB1 LINE L1 7237 7585 -2 634 340 110 0 chrX_random 690874 691209 -8607797 + LTR16A LTR ERVL 1 372 -78 255 264 11 11 chrX_random 693903 693990 -8605016 + (TA)n Simple_repeat Simple_repeat 2 88 0 2309 93 10 0 chrX_random 694051 694353 -8604653 - AluSq SINE Alu -6 307 3 2089 134 32 29 chrX_random 694381 694755 -8604251 - THE1C LTR MaLR 0 375 1 23 0 0 0 chrX_random 697507 697530 -8601476 + AT_rich Low_complexity Low_complexity 1 23 0 27 29 0 0 chrX_random 697806 697840 -8601166 + AT_rich Low_complexity Low_complexity 1 34 0 3400 120 51 51 chrX_random 698298 698908 -8600098 - MER4B LTR ERV1 0 610 1 5814 144 23 29 chrX_random 698908 699936 -8599070 - MER4B-int LTR ERV1 0 6758 5737 2167 123 28 19 chrX_random 699950 700274 -8598732 + MER1B DNA MER1_type 13 339 0 2851 101 35 53 chrX_random 700295 700781 -8598225 - MER4B-int LTR ERV1 -1269 5489 5013 968 85 24 55 chrX_random 700783 700948 -8598058 - MER4B-int LTR ERV1 -2278 4480 4321 8748 137 23 34 chrX_random 700952 702063 -8596943 - MER4B-int LTR ERV1 -2572 4186 3064 2256 112 0 0 chrX_random 702063 702359 -8596647 - AluSq SINE Alu -17 296 1 8748 137 23 34 chrX_random 702359 703973 -8595033 - MER4B-int LTR ERV1 -3694 3064 786 783 191 62 99 chrX_random 704168 704458 -8594548 + MER51C LTR ERV1 370 640 0 5132 116 28 23 chrX_random 704458 705176 -8593830 - MER4B-int LTR ERV1 -5691 1067 343 2341 67 40 0 chrX_random 705176 705475 -8593531 + AluY SINE Alu 1 311 0 5132 116 28 23 chrX_random 705475 705622 -8593384 - MER4B-int LTR ERV1 -6415 343 198 1055 247 37 27 chrX_random 705643 705979 -8593027 - MER4B-int LTR ERV1 -4172 2159 1861 30 0 0 0 chrX_random 705981 706011 -8592995 + AT_rich Low_complexity Low_complexity 1 30 0 294 84 0 56 chrX_random 706043 706114 -8592892 + (TTTTTG)n Simple_repeat Simple_repeat 1 67 0 2054 152 63 17 chrX_random 706181 706754 -8592252 - MER4B-int LTR ERV1 -5912 686 1 3778 113 51 10 chrX_random 706757 707343 -8591663 - MER4B LTR ERV1 0 610 1 299 290 123 42 chrX_random 707379 707525 -8591481 + L1MC4a LINE L1 7154 7287 -755 2256 114 0 0 chrX_random 707525 707814 -8591192 - AluSg SINE Alu -21 289 1 299 290 123 42 chrX_random 707814 708251 -8590755 + L1MC4a LINE L1 7287 7687 -355 252 59 0 0 chrX_random 708251 708285 -8590721 + (TG)n Simple_repeat Simple_repeat 1 34 0 401 114 143 0 chrX_random 708291 708361 -8590645 + MADE1 DNA Mariner 1 80 0 299 290 123 42 chrX_random 708361 708510 -8590496 + L1MC4a LINE L1 7691 8035 -7 224 339 58 63 chrX_random 709021 709195 -8589811 + MIR SINE MIR 63 235 -27 2282 67 16 3 chrX_random 709394 709707 -8589299 - L1MA1 LINE L1 -4 6298 5982 1770 114 0 4 chrX_random 709723 709987 -8589019 - AluSq SINE Alu 0 313 51 92 58 0 6 chrX_random 710089 710221 -8588785 + AT_rich Low_complexity Low_complexity 1 133 -39 1690 175 3 30 chrX_random 710221 710518 -8588488 - AluJo SINE Alu -22 290 2 92 58 0 6 chrX_random 710518 710558 -8588448 + AT_rich Low_complexity Low_complexity 133 172 0 399 293 65 45 chrX_random 710981 711227 -8587779 - LTR16A1 LTR ERVL -61 396 146 1068 261 30 43 chrX_random 711636 711770 -8587236 - MLT1E3 LTR MaLR 0 624 490 1423 224 61 45 chrX_random 711770 712002 -8587004 - LTR2 LTR ERV1 0 449 205 186 43 0 0 chrX_random 712002 712025 -8586981 + (CAGAA)n Simple_repeat Simple_repeat 1 23 0 1423 224 61 45 chrX_random 712025 712234 -8586772 - LTR2 LTR ERV1 -244 205 1 1068 261 30 43 chrX_random 712234 712470 -8586536 - MLT1E3 LTR MaLR -134 490 259 484 262 134 6 chrX_random 712612 712784 -8586222 - MLT1E3 LTR MaLR -430 194 1 1543 155 111 28 chrX_random 712887 713275 -8585731 - LTR49 LTR ERV1 -169 426 7 2460 214 48 52 chrX_random 713281 714009 -8584997 + MER50 LTR ERV1 10 734 0 3628 78 14 151 chrX_random 714185 714880 -8584126 + MER4A LTR ERV1 1 600 0 4142 148 35 3 chrX_random 715466 716155 -8582851 - MER50 LTR ERV1 -23 711 1 272 323 120 42 chrX_random 716716 716908 -8582098 + MIR SINE MIR 45 251 -11 281 237 43 32 chrX_random 717146 717239 -8581767 + L3b LINE CR1 1326 1419 -164 320 346 62 11 chrX_random 717737 717916 -8581090 - L1ME LINE L1 -449 5790 5603 345 269 77 39 chrX_random 717948 718104 -8580902 - L1ME LINE L1 -772 5443 5282 604 229 42 132 chrX_random 718228 718652 -8580354 - L1MD2 LINE L1 -79 6280 5895 542 323 45 15 chrX_random 718771 719037 -8579969 - L1ME LINE L1 -3976 2420 2147 2307 79 0 47 chrX_random 719504 719821 -8579185 - AluSp SINE Alu -11 302 1 898 173 35 6 chrX_random 720428 720601 -8578405 - MLT1C LTR MaLR 0 467 290 385 281 63 89 chrX_random 720605 721323 -8577683 - L1M4 LINE L1 -1370 4776 4080 2049 147 3 3 chrX_random 721323 721636 -8577370 - AluSq SINE Alu 0 313 1 385 281 63 89 chrX_random 721636 721726 -8577280 - L1M4 LINE L1 -2066 4080 3989 21 0 0 0 chrX_random 721780 721801 -8577205 + AT_rich Low_complexity Low_complexity 1 21 0 635 270 90 75 chrX_random 721883 722447 -8576559 - L1M4 LINE L1 -1155 4991 4437 2231 108 3 13 chrX_random 722447 722754 -8576252 - AluSp SINE Alu -9 304 1 635 270 90 75 chrX_random 722754 723298 -8575708 - L1M4 LINE L1 -1709 4437 3866 331 313 39 22 chrX_random 723317 723496 -8575510 + LTR33A LTR ERVL 3 184 -339 30 27 0 0 chrX_random 723505 723542 -8575464 + AT_rich Low_complexity Low_complexity 1 37 0 320 290 28 83 chrX_random 723627 723917 -8575089 + L1MC5 LINE L1 7076 7349 -612 2193 89 0 0 chrX_random 724226 724506 -8574500 + AluSg SINE Alu 14 293 -17 2373 63 0 38 chrX_random 725338 725653 -8573353 - AluY SINE Alu -8 303 1 182 362 29 58 chrX_random 731487 731625 -8567381 - MIR3 SINE MIR -74 134 1 23 42 0 21 chrX_random 732499 732520 -8566486 + AT_rich Low_complexity Low_complexity 1 21 -26 2202 87 31 0 chrX_random 732520 732807 -8566199 + AluSg1 SINE Alu 1 296 -13 23 42 0 21 chrX_random 732807 732833 -8566173 + AT_rich Low_complexity Low_complexity 21 47 0 870 185 116 139 chrX_random 732940 733544 -8565462 + LTR49 LTR ERV1 5 594 -1 681 125 0 45 chrX_random 733700 733759 -8565247 + AluSg/x SINE Alu 187 240 -72 2850 117 19 2 chrX_random 733759 734186 -8564820 + MER57B LTR ERV1 1 434 0 681 125 0 45 chrX_random 734186 734238 -8564768 + AluSg/x SINE Alu 240 293 -19 28 29 0 0 chrX_random 734775 734810 -8564196 + AT_rich Low_complexity Low_complexity 1 35 0 2435 111 31 0 chrX_random 735042 735395 -8563611 + THE1B LTR MaLR 1 364 0 1036 256 33 56 chrX_random 736076 736606 -8562400 - PABL_B LTR ERV1 -4 663 3 21 36 0 0 chrX_random 737075 737103 -8561903 + AT_rich Low_complexity Low_complexity 1 28 0 1022 186 0 33 chrX_random 738741 738924 -8560082 - AluJo SINE Alu -17 295 119 830 168 8 0 chrX_random 738953 739084 -8559922 - AluJo SINE Alu -170 132 1 2015 161 98 21 chrX_random 739285 739713 -8559293 - LOR1b LTR ERV1 0 461 1 1414 169 26 4 chrX_random 739714 739981 -8559025 - LOR1b-int LTR ERV1 -2 8118 7846 680 87 78 0 chrX_random 739981 740084 -8558922 - LOR1b-int LTR ERV1 -427 7693 7583 15613 152 21 60 chrX_random 740088 741974 -8557032 - LOR1b-int LTR ERV1 -1305 6815 4857 1835 188 26 0 chrX_random 741974 742278 -8556728 - AluJb SINE Alu 0 312 1 15613 152 21 60 chrX_random 742278 744050 -8554956 - LOR1b-int LTR ERV1 -3263 4857 2400 4410 124 24 66 chrX_random 744611 745576 -8553430 - LOR1b-int LTR ERV1 -6217 1903 980 1657 265 110 22 chrX_random 745582 746164 -8552842 + MER50 LTR ERV1 79 711 -23 404 184 0 0 chrX_random 746182 746285 -8552721 - LOR1b-int LTR ERV1 -7436 684 423 2328 183 16 13 chrX_random 746330 746393 -8552613 - LOR1b-int LTR ERV1 -7670 450 389 2329 97 0 10 chrX_random 746393 746702 -8552304 + AluSg SINE Alu 5 310 0 2328 183 16 13 chrX_random 746702 747087 -8551919 - LOR1b-int LTR ERV1 -7731 389 1 1880 164 90 14 chrX_random 747094 747343 -8551663 - LOR1b LTR ERV1 -7 454 159 1417 112 0 0 chrX_random 747343 747549 -8551457 - L1PA14 LINE L1 -17 6144 5939 1880 164 90 14 chrX_random 747549 747721 -8551285 - LOR1b LTR ERV1 -302 159 1 23 0 0 0 chrX_random 747856 747879 -8551127 + AT_rich Low_complexity Low_complexity 1 23 0 562 172 0 17 chrX_random 748689 748805 -8550201 + LTR49 LTR ERV1 318 431 -164 2316 89 0 54 chrX_random 748858 748985 -8550021 + MER4A LTR ERV1 5 137 -527 3182 138 11 72 chrX_random 748985 749577 -8549429 + MER4B LTR ERV1 1 551 -59 2178 78 4 0 chrX_random 749577 749845 -8549161 - AluSp SINE Alu -11 302 34 3182 138 11 72 chrX_random 749845 749902 -8549104 + MER4B LTR ERV1 551 610 0 2316 89 0 54 chrX_random 749902 750143 -8548863 + MER4A LTR ERV1 137 353 -311 1943 128 12 77 chrX_random 750112 750469 -8548537 + MER4A LTR ERV1 170 607 -57 * 5853 113 12 8 chrX_random 750469 752204 -8546802 - L1PA14 LINE L1 -9 6152 4409 1943 128 12 77 chrX_random 752204 752259 -8546747 + MER4A LTR ERV1 607 664 0 559 143 9 54 chrX_random 752259 752371 -8546635 + LTR49 LTR ERV1 489 595 0 1092 271 110 47 chrX_random 752654 752815 -8546191 + HAL1b LINE L1 376 525 -823 1445 208 127 92 chrX_random 752815 753518 -8545488 + LTR8A LTR ERV1 1 727 0 1092 271 110 47 chrX_random 753518 754265 -8544741 + HAL1b LINE L1 525 1341 -7 180 0 0 0 chrX_random 755913 755933 -8543073 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 6465 109 7 6 chrX_random 756975 757946 -8541060 - L1PB1 LINE L1 0 6151 5175 216 0 0 0 chrX_random 757946 757970 -8541036 + (TTA)n Simple_repeat Simple_repeat 2 25 0 6465 109 7 6 chrX_random 757970 758073 -8540933 - L1PB1 LINE L1 -976 5175 5074 201 290 101 0 chrX_random 758369 758438 -8540568 + L2 LINE L2 2425 2500 -814 1730 121 56 8 chrX_random 758482 758985 -8540021 - LTR36 LTR ERV1 0 611 4 700 65 0 11 chrX_random 759023 759116 -8539890 + L1PB1 LINE L1 5861 5952 -199 1372 114 24 24 chrX_random 759116 759350 -8539656 + AluSg/x SINE Alu 71 304 0 1212 135 0 5 chrX_random 759350 759543 -8539463 + L1PB1 LINE L1 5960 6151 0 497 242 32 23 chrX_random 759551 759711 -8539295 + L1MB7 LINE L1 6010 6179 -4 915 186 26 0 chrX_random 759956 760149 -8538857 - L1MA5 LINE L1 -2 6298 6101 235 384 0 0 chrX_random 761016 761102 -8537904 - MER5A DNA MER1_type -1 188 103 2212 100 0 0 chrX_random 761102 761402 -8537604 + AluSx SINE Alu 1 300 -12 203 310 23 35 chrX_random 761416 761503 -8537503 - MER5B DNA MER1_type -75 103 18 195 69 0 0 chrX_random 762120 762149 -8536857 + (GA)n Simple_repeat Simple_repeat 2 30 0 22 35 0 0 chrX_random 762373 762402 -8536604 + AT_rich Low_complexity Low_complexity 1 29 0 2941 200 65 51 chrX_random 762761 763061 -8535945 - L1MB5 LINE L1 -31 6143 5849 2195 85 3 3 chrX_random 763061 763390 -8535616 - AluSp SINE Alu 0 329 1 2941 200 65 51 chrX_random 763390 764388 -8534618 - L1MB5 LINE L1 -325 5849 4815 2775 174 10 35 chrX_random 764395 765041 -8533965 - LTR8A-int LTR ERV1 -2043 2837 2302 500 202 58 4 chrX_random 765114 765236 -8533770 - LTR8A-int LTR ERV1 -3729 2217 2112 22 0 0 0 chrX_random 765328 765350 -8533656 + AT_rich Low_complexity Low_complexity 1 22 0 747 212 65 37 chrX_random 765350 765677 -8533329 - LTR8A-int LTR ERV1 -5470 1128 803 415 349 32 16 chrX_random 765953 766142 -8532864 - LTR8A-int LTR ERV1 -6071 192 1 879 257 151 18 chrX_random 766142 766527 -8532479 - LTR8A LTR ERV1 0 727 292 412 259 67 15 chrX_random 766710 766765 -8532241 - LTR8 LTR ERV1 -547 144 93 243 0 0 0 chrX_random 766765 766792 -8532214 + (TTA)n Simple_repeat Simple_repeat 2 28 0 412 259 67 15 chrX_random 766792 766871 -8532135 - LTR8 LTR ERV1 -598 93 3 226 189 0 0 chrX_random 766946 766983 -8532023 + LTR48B LTR ERV1 5 41 -603 2085 111 30 0 chrX_random 766983 767280 -8531726 + AluSx SINE Alu 1 306 -6 2985 183 45 7 chrX_random 767319 767893 -8531113 + LTR29 LTR ERV1 27 622 0 22 35 0 0 chrX_random 768250 768279 -8530727 + AT_rich Low_complexity Low_complexity 1 29 0 469 90 146 0 chrX_random 769115 769204 -8529802 + LTR60 LTR ERV1 1 102 -484 370 159 142 108 chrX_random 769205 769381 -8529625 + LTR60 LTR ERV1 404 585 -1 31 0 0 0 chrX_random 769687 769718 -8529288 + AT_rich Low_complexity Low_complexity 1 31 0 2864 171 0 4 chrX_random 769768 770271 -8528735 - L1PA16 LINE L1 -2 6164 5664 828 181 39 11 chrX_random 770271 770439 -8528567 + L1MC1 LINE L1 6147 6333 0 242 350 15 36 chrX_random 770685 770822 -8528184 - MIR SINE MIR -113 149 16 1447 105 0 0 chrX_random 771205 771396 -8527610 + AluSc SINE Alu 36 226 -83 550 254 81 22 chrX_random 771588 771773 -8527233 + MIR SINE MIR 21 216 -46 764 253 76 67 chrX_random 771855 772183 -8526823 - L2 LINE L2 0 3313 2983 485 201 61 26 chrX_random 772448 772620 -8526386 + L1MA10 LINE L1 5987 6326 -8 22 56 0 0 chrX_random 772839 772875 -8526131 + AT_rich Low_complexity Low_complexity 1 36 0 23 54 0 0 chrX_random 772949 772986 -8526020 + AT_rich Low_complexity Low_complexity 1 37 0 6172 260 48 26 chrX_random 773653 775913 -8523093 + L1MB7 LINE L1 2452 4762 -1384 2286 66 0 0 chrX_random 776070 776344 -8522662 + AluY SINE Alu 6 279 -32 207 0 0 0 chrX_random 776346 776369 -8522637 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 2574 219 85 32 chrX_random 776369 777021 -8521985 + L1MB7 LINE L1 5324 6022 -162 1947 130 0 11 chrX_random 777021 777332 -8521674 + AluSx SINE Alu 1 308 0 2574 219 85 32 chrX_random 777332 777421 -8521585 + L1MB7 LINE L1 6022 6105 -79 25 83 0 0 chrX_random 777499 777559 -8521447 + AT_rich Low_complexity Low_complexity 1 60 0 24 0 0 0 chrX_random 777969 777993 -8521013 + AT_rich Low_complexity Low_complexity 1 24 0 917 240 84 20 chrX_random 778150 778446 -8520560 + LTR16A1 LTR ERVL 143 457 0 307 340 29 10 chrX_random 778641 778744 -8520262 - L2 LINE L2 0 3272 3168 1318 32 0 0 chrX_random 779302 779460 -8519546 + L1PA5 LINE L1 5997 6154 0 475 220 9 28 chrX_random 779930 780039 -8518967 - L2 LINE L2 0 3313 3207 21 0 0 0 chrX_random 780313 780334 -8518672 + AT_rich Low_complexity Low_complexity 1 21 0 309 188 0 0 chrX_random 780339 780419 -8518587 + (TA)n Simple_repeat Simple_repeat 1 80 0 264 111 0 0 chrX_random 781089 781134 -8517872 + (ATG)n Simple_repeat Simple_repeat 2 46 0 285 109 0 0 chrX_random 781411 781457 -8517549 + (TTA)n Simple_repeat Simple_repeat 3 48 0 368 326 75 42 chrX_random 781954 782261 -8516745 + L2 LINE L2 2373 2689 -625 2182 121 0 0 chrX_random 782336 782642 -8516364 - AluSx SINE Alu -6 306 1 26 50 0 0 chrX_random 782985 783025 -8515981 + AT_rich Low_complexity Low_complexity 1 40 0 336 137 93 201 chrX_random 783636 783840 -8515166 - MLT1H LTR MaLR -9 540 359 4981 260 44 40 chrX_random 784009 786525 -8512481 + L1M4 LINE L1 38 2697 -4128 551 81 0 0 chrX_random 786527 786601 -8512405 + L1PA10 LINE L1 6091 6164 -4 1678 133 30 7 chrX_random 786796 787097 -8511909 - L1MA8 LINE L1 -186 6105 5798 453 36 0 0 chrX_random 787097 787152 -8511854 + (CA)n Simple_repeat Simple_repeat 1 55 0 794 137 16 0 chrX_random 787159 787283 -8511723 + L1M2 LINE L1 5643 5768 -532 303 172 61 10 chrX_random 787397 787470 -8511536 - MIR SINE MIR -74 188 114 2331 74 3 0 chrX_random 787585 787883 -8511123 + AluSp SINE Alu 1 299 -14 1966 250 121 11 chrX_random 788079 788442 -8510564 + LTR41 LTR ERVL 3 325 -448 2333 72 0 7 chrX_random 788442 788746 -8510260 + AluSg SINE Alu 2 303 -7 1966 250 121 11 chrX_random 788746 788994 -8510012 + LTR41 LTR ERVL 325 681 -92 22 56 0 0 chrX_random 789012 789048 -8509958 + AT_rich Low_complexity Low_complexity 1 36 0 245 183 49 73 chrX_random 789052 789134 -8509872 + LTR41 LTR ERVL 679 758 -15 669 339 52 7 chrX_random 789440 789729 -8509277 + ERVL LTR ERVL 353 654 -5110 254 312 99 20 chrX_random 789968 790170 -8508836 - L2 LINE L2 -1232 2082 1865 21 36 0 0 chrX_random 790621 790649 -8508357 + AT_rich Low_complexity Low_complexity 1 28 0 291 294 70 0 chrX_random 791230 791373 -8507633 + L1MC/D LINE L1 5674 5826 -1982 1246 286 51 15 chrX_random 791729 792180 -8506826 - MLT1F LTR MaLR -43 524 8 34 55 0 0 chrX_random 792182 792237 -8506769 + AT_rich Low_complexity Low_complexity 1 55 0 24 67 0 0 chrX_random 792676 792721 -8506285 + AT_rich Low_complexity Low_complexity 1 45 0 2133 76 4 14 chrX_random 792855 793131 -8505875 + AluSg SINE Alu 28 300 -10 246 406 32 19 chrX_random 793169 793324 -8505682 - L2 LINE L2 0 3272 3116 267 31 0 0 chrX_random 794148 794180 -8504826 + (TG)n Simple_repeat Simple_repeat 2 33 0 306 0 0 0 chrX_random 794502 794536 -8504470 + (TG)n Simple_repeat Simple_repeat 2 35 0 386 335 196 25 chrX_random 794602 795049 -8503957 - L2 LINE L2 -515 2799 2430 1256 184 35 0 chrX_random 795049 795277 -8503729 - MER46A DNA MER2_type 0 236 1 386 335 196 25 chrX_random 795277 795506 -8503500 - L2 LINE L2 -884 2430 2007 1362 212 7 26 chrX_random 795723 796030 -8502976 - AluJb SINE Alu -9 303 3 977 324 44 12 chrX_random 800084 800489 -8498517 + L2 LINE L2 962 1379 -1935 1157 284 65 20 chrX_random 800502 801203 -8497803 + L2 LINE L2 2293 3308 -5 200 275 29 43 chrX_random 801728 801797 -8497209 - L2 LINE L2 -19 3294 3227 377 225 14 0 chrX_random 802045 802116 -8496890 - MER90 LTR ERV1 -498 77 6 788 262 22 27 chrX_random 802155 802290 -8496716 + MER58A DNA MER1_type 1 136 -2284 2380 80 3 0 chrX_random 802290 802589 -8496417 + AluSc SINE Alu 1 300 -9 788 262 22 27 chrX_random 802589 802678 -8496328 + MER58A DNA MER1_type 136 224 0 4152 189 25 4 chrX_random 803229 804063 -8494943 - L1MB7 LINE L1 -1 6183 5332 379 259 12 0 chrX_random 804063 804144 -8494862 + MLT1D LTR MaLR 1 82 -423 2174 108 0 3 chrX_random 804317 804614 -8494392 - AluSg SINE Alu -14 296 1 24 0 0 0 chrX_random 804951 804975 -8494031 + AT_rich Low_complexity Low_complexity 1 24 0 500 264 52 11 chrX_random 805664 805836 -8493170 + MLT1E3 LTR MaLR 432 610 -14 7518 133 12 59 chrX_random 805836 806291 -8492715 - HSMAR2 DNA Mariner -2 1300 826 2170 97 3 0 chrX_random 806291 806580 -8492426 - AluSg SINE Alu -20 290 1 7518 133 12 59 chrX_random 806580 807486 -8491520 - HSMAR2 DNA Mariner -476 826 2 461 325 39 28 chrX_random 807922 808122 -8490884 + LTR16A1 LTR ERVL 146 351 -106 958 156 84 156 chrX_random 808122 808196 -8490810 + MLT1A1 LTR MaLR 1 79 -286 2068 119 0 10 chrX_random 808196 808489 -8490517 + AluSx SINE Alu 19 308 -4 958 156 84 156 chrX_random 808489 808806 -8490200 + MLT1A1 LTR MaLR 79 364 -1 461 325 39 28 chrX_random 808806 808860 -8490146 + LTR16A1 LTR ERVL 351 403 -54 244 291 9 73 chrX_random 809578 809688 -8489318 - MIR SINE MIR -19 243 141 2502 169 139 30 chrX_random 810211 810856 -8488150 - LTR48 LTR ERV1 -71 716 1 240 200 0 0 chrX_random 811042 811092 -8487914 + (CA)n Simple_repeat Simple_repeat 1 50 0 301 276 135 22 chrX_random 811093 811351 -8487655 - L1MC4 LINE L1 -91 7717 7474 2614 134 54 18 chrX_random 811379 812119 -8486887 + MER4E LTR ERV1 1 779 0 429 345 43 8 chrX_random 812119 812374 -8486632 - L1MC4 LINE L1 -545 7497 7234 845 195 0 26 chrX_random 812517 812671 -8486335 + FRAM SINE Alu 1 146 -30 189 74 0 0 chrX_random 812674 812701 -8486305 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 312 246 0 0 chrX_random 812918 812983 -8486023 + L1MC4 LINE L1 6638 6702 -1340 2787 185 60 71 chrX_random 813209 813944 -8485062 - LTR8A LTR ERV1 0 727 1 292 198 17 0 chrX_random 814325 814390 -8484616 - L1MC4 LINE L1 -589 7291 7154 23 33 0 0 chrX_random 816001 816031 -8482975 + AT_rich Low_complexity Low_complexity 1 30 0 1872 94 4 0 chrX_random 816230 816475 -8482531 - AluSp SINE Alu -5 308 63 264 111 0 0 chrX_random 817232 817277 -8481729 + (CA)n Simple_repeat Simple_repeat 2 46 0 49 52 0 0 chrX_random 817662 817739 -8481267 + AT_rich Low_complexity Low_complexity 1 77 0 21 36 0 0 chrX_random 818240 818268 -8480738 + AT_rich Low_complexity Low_complexity 1 28 0 451 277 31 62 chrX_random 818279 818474 -8480532 - MER5A DNA MER1_type 0 189 1 388 190 0 0 chrX_random 818629 818708 -8480298 + MER116 DNA Mariner 2 80 0 30 59 0 0 chrX_random 818723 818774 -8480232 + AT_rich Low_complexity Low_complexity 1 51 0 712 100 25 17 chrX_random 819143 819263 -8479743 - AluSc SINE Alu -188 121 1 1943 121 0 54 chrX_random 820163 820478 -8478528 + AluJb SINE Alu 1 298 -14 315 71 0 0 chrX_random 820904 820946 -8478060 + (TG)n Simple_repeat Simple_repeat 2 43 0 5755 240 53 36 chrX_random 820946 821305 -8477701 - L1MD2 LINE L1 -222 6397 6046 258 32 0 0 chrX_random 821305 821336 -8477670 + (TA)n Simple_repeat Simple_repeat 2 32 0 5755 240 53 36 chrX_random 821336 823029 -8475977 - L1MD2 LINE L1 -573 6046 4264 2006 122 7 0 chrX_random 823029 823341 -8475665 + AluSx SINE Alu 6 319 0 5755 240 53 36 chrX_random 823341 824510 -8474496 - L1MD2 LINE L1 -2355 4264 3117 1184 247 40 27 chrX_random 824515 825162 -8473844 - L1MD2 LINE L1 -3681 2725 2070 307 221 57 86 chrX_random 825166 825306 -8473700 - L1MD2 LINE L1 -4374 2032 1897 276 170 0 0 chrX_random 825308 825361 -8473645 + CT-rich Low_complexity Low_complexity 1 53 0 926 199 0 0 chrX_random 825361 825527 -8473479 - AluJb SINE Alu -18 294 129 1950 142 26 0 chrX_random 825555 825858 -8473148 - AluSx SINE Alu -1 311 1 269 222 0 0 chrX_random 825865 825928 -8473078 - L1MD2 LINE L1 -4476 1930 1868 2134 114 3 0 chrX_random 825940 826230 -8472776 - AluSc SINE Alu -18 291 1 6802 116 14 10 chrX_random 826233 827470 -8471536 - L1MA3 LINE L1 -2 6303 5062 8509 173 14 12 chrX_random 827479 828950 -8470056 - L1M1 LINE L1 -6053 1512 40 4581 233 43 59 chrX_random 828949 830906 -8468100 - L1MD2 LINE L1 -4517 1889 7 * 1080 239 112 73 chrX_random 831303 832229 -8466777 - Charlie2 DNA MER1_type -49 2813 1852 513 273 26 32 chrX_random 832228 832382 -8466624 - Charlie2 DNA MER1_type -2458 324 172 * 24 0 0 0 chrX_random 832581 832605 -8466401 + AT_rich Low_complexity Low_complexity 1 24 0 4544 12 0 0 chrX_random 832605 833120 -8465886 - L1PA3 LINE L1 -3 6152 5638 22 0 0 0 chrX_random 834523 834545 -8464461 + AT_rich Low_complexity Low_complexity 1 22 0 739 62 0 0 chrX_random 834545 834642 -8464364 - L1MA1 LINE L1 -4 6298 6202 260 244 7 126 chrX_random 835608 835743 -8463263 + L2 LINE L2 1922 2040 -1274 1054 184 141 14 chrX_random 835914 836191 -8462815 + L1ME1 LINE L1 5833 6144 -22 1182 134 0 0 chrX_random 836198 836384 -8462622 - AluSq SINE Alu 0 305 120 697 67 115 10 chrX_random 836470 836574 -8462432 - AluSq SINE Alu -196 117 3 2172 89 3 7 chrX_random 837742 838033 -8460973 - AluSc SINE Alu -19 290 1 583 198 24 8 chrX_random 838113 838239 -8460767 + MER3 DNA MER1_type 70 197 -12 3238 222 77 2 chrX_random 838917 839108 -8459898 - L1MD2 LINE L1 -10 6349 6174 198 71 0 0 chrX_random 839108 839136 -8459870 + (TG)n Simple_repeat Simple_repeat 2 29 0 3238 222 77 2 chrX_random 839136 839765 -8459241 - L1MD2 LINE L1 -185 6174 5468 270 252 24 49 chrX_random 839762 839885 -8459121 - HAL1 LINE L1 -242 2265 2146 * 4199 129 1 8 chrX_random 839896 840562 -8458444 - L1MA2 LINE L1 0 7723 7062 11119 108 4 2 chrX_random 840562 842221 -8456785 + L1P LINE L1 2644 4306 -1840 10644 153 13 56 chrX_random 842219 844643 -8454363 - L1P3 LINE L1 -4046 2415 10 * 6569 174 23 8 chrX_random 844649 845975 -8453031 - L1MA2 LINE L1 -746 6819 5474 4751 169 13 8 chrX_random 845973 847628 -8451378 - L1MA2 LINE L1 -2984 4581 2921 * 2054 127 3 13 chrX_random 847628 847935 -8451071 - AluSx SINE Alu -8 304 1 24 85 0 0 chrX_random 848475 848534 -8450472 + AT_rich Low_complexity Low_complexity 1 59 0 21 57 0 0 chrX_random 848547 848582 -8450424 + AT_rich Low_complexity Low_complexity 1 35 0 25 65 0 0 chrX_random 848639 848685 -8450321 + AT_rich Low_complexity Low_complexity 1 46 0 560 212 66 35 chrX_random 849876 850102 -8448904 + L1MC4a LINE L1 5254 5486 -2322 989 245 21 13 chrX_random 850103 850340 -8448666 - MLT1E2 LTR MaLR -1 625 387 332 240 150 97 chrX_random 850358 850412 -8448594 - MLT1E2 LTR MaLR -345 281 231 2514 55 3 0 chrX_random 850412 850719 -8448287 + AluY SINE Alu 1 308 -3 332 240 150 97 chrX_random 850719 850931 -8448075 - MLT1E2 LTR MaLR -395 231 1 786 269 60 27 chrX_random 851062 851396 -8447610 + L1MC4a LINE L1 5598 5942 -1866 963 179 10 20 chrX_random 851411 851606 -8447400 + MER20 DNA MER1_type 27 219 0 329 299 97 0 chrX_random 852242 852396 -8446610 - MLT1J LTR MaLR -12 499 331 408 306 82 0 chrX_random 852514 852685 -8446321 - MLT1J LTR MaLR -290 156 6 1148 141 5 0 chrX_random 853008 853192 -8445814 - L1PB2 LINE L1 -3 6148 5964 1468 112 22 60 chrX_random 853192 853459 -8445547 - AluSx SINE Alu -14 298 42 26 88 0 0 chrX_random 853833 853901 -8445105 + AT_rich Low_complexity Low_complexity 1 68 0 6271 148 27 43 chrX_random 854018 856111 -8442895 + L1PA3 LINE L1 4104 6155 0 3502 100 2 18 chrX_random 856111 856648 -8442358 + L1MA1 LINE L1 5762 6302 0 426 238 19 38 chrX_random 857767 857872 -8441134 + MER5A DNA MER1_type 10 112 -77 198 0 0 0 chrX_random 857908 857930 -8441076 + (TG)n Simple_repeat Simple_repeat 1 22 0 345 274 151 0 chrX_random 859333 859439 -8439567 - L2 LINE L2 -9 3304 3183 644 189 21 161 chrX_random 859855 860140 -8438866 - L1ME3 LINE L1 -6 6156 5912 24 0 0 0 chrX_random 860156 860180 -8438826 + AT_rich Low_complexity Low_complexity 1 24 0 368 316 107 18 chrX_random 862074 862242 -8436764 + MIR SINE MIR 74 256 -6 2261 97 0 3 chrX_random 862398 862688 -8436318 + AluSc SINE Alu 1 289 -20 248 273 0 0 chrX_random 862702 862790 -8436216 + L1MC4 LINE L1 6614 6701 -1341 237 300 0 0 chrX_random 862734 862824 -8436182 - L1MC4 LINE L1 -1339 6703 6614 * 206 133 0 44 chrX_random 862824 862869 -8436137 + (TATATG)n Simple_repeat Simple_repeat 3 45 0 248 242 44 44 chrX_random 862869 862960 -8436046 + L1MC4 LINE L1 6613 6703 -1339 621 195 0 35 chrX_random 862963 863137 -8435869 + (TATATG)n Simple_repeat Simple_repeat 1 168 0 310 286 0 22 chrX_random 863137 863228 -8435778 - L1MC4 LINE L1 -1340 6702 6614 232 345 0 0 chrX_random 863232 863319 -8435687 - L1MC4 LINE L1 -1339 6703 6617 293 310 6 0 chrX_random 863327 863485 -8435521 + (TA)n Simple_repeat Simple_repeat 2 160 0 1282 136 9 31 chrX_random 863722 863950 -8435056 + L1MA7 LINE L1 5888 6110 -181 316 70 0 0 chrX_random 863950 863993 -8435013 + Alu SINE Alu 1 43 -259 2430 71 0 3 chrX_random 864874 865171 -8433835 - AluSq SINE Alu -17 296 1 1104 114 23 0 chrX_random 865449 865624 -8433382 - L1MA6 LINE L1 0 6300 6122 1881 115 0 61 chrX_random 865698 866010 -8432996 + AluSg SINE Alu 1 293 -17 25 0 0 0 chrX_random 866838 866863 -8432143 + AT_rich Low_complexity Low_complexity 1 25 0 2513 228 28 44 chrX_random 869289 869863 -8429143 + L1MC3 LINE L1 6348 6907 -878 2489 62 0 10 chrX_random 869863 870171 -8428835 + AluY SINE Alu 1 305 -6 2513 228 28 44 chrX_random 870171 870361 -8428645 + L1MC3 LINE L1 6907 7099 -686 2362 85 0 0 chrX_random 870660 870954 -8428052 + AluSx SINE Alu 4 297 -15 2275 105 3 0 chrX_random 871272 871566 -8427440 + AluSp SINE Alu 1 295 -18 3994 130 38 9 chrX_random 871740 872240 -8426766 + MER39B LTR ERV1 1 524 -129 2148 119 19 58 chrX_random 872240 872401 -8426605 + THE1B LTR MaLR 1 167 -197 2337 118 0 0 chrX_random 872401 872706 -8426300 - AluSg SINE Alu -5 305 1 2148 119 19 58 chrX_random 872706 872923 -8426083 + THE1B LTR MaLR 167 364 0 3994 130 38 9 chrX_random 872923 873052 -8425954 + MER39B LTR ERV1 524 648 -5 306 0 0 0 chrX_random 874579 874613 -8424393 + (TG)n Simple_repeat Simple_repeat 2 35 0 4502 216 46 28 chrX_random 875194 876128 -8422878 - L1MB3 LINE L1 0 6183 5267 4856 25 0 0 chrX_random 876128 876693 -8422313 - L1PA4 LINE L1 -6 6149 5585 4502 216 46 28 chrX_random 876693 878010 -8420996 - L1MB3 LINE L1 -916 5267 3898 2570 247 22 46 chrX_random 878019 878199 -8420807 - L1MB3 LINE L1 -2663 3483 3300 2659 151 7 2 chrX_random 878199 878622 -8420384 + MSTA LTR MaLR 4 428 0 2570 247 22 46 chrX_random 878622 879196 -8419810 - L1MB3 LINE L1 -2846 3300 2758 2250 112 0 0 chrX_random 879196 879492 -8419514 - AluSx SINE Alu -16 296 1 2570 247 22 46 chrX_random 879492 879780 -8419226 - L1MB3 LINE L1 -3388 2758 2465 3547 179 30 24 chrX_random 880040 880761 -8418245 + L1MC1 LINE L1 5598 6323 -10 37 81 0 0 chrX_random 882196 882282 -8416724 + AT_rich Low_complexity Low_complexity 1 86 0 268 268 0 0 chrX_random 882291 882373 -8416633 + L1P LINE L1 3108 3189 -2957 533 85 61 0 chrX_random 882375 882457 -8416549 + L1PA15 LINE L1 6072 6158 -7 1194 158 0 0 chrX_random 882734 882917 -8416089 - AluJ SINE Alu -10 302 120 180 111 0 0 chrX_random 882929 882956 -8416050 + (A)n Simple_repeat Simple_repeat 1 27 0 344 271 21 76 chrX_random 883697 883841 -8415165 - LTR16A1 LTR ERVL -296 161 26 2189 98 3 0 chrX_random 883989 884275 -8414731 - AluSp SINE Alu -24 289 3 24 0 0 0 chrX_random 884788 884812 -8414194 + AT_rich Low_complexity Low_complexity 1 24 0 191 353 47 55 chrX_random 885796 886031 -8412975 + L2 LINE L2 2654 2886 -428 620 294 45 5 chrX_random 887168 887369 -8411637 - MIR SINE MIR -40 222 14 427 192 32 214 chrX_random 887534 887815 -8411191 - MIR SINE MIR -10 252 23 438 244 32 49 chrX_random 887881 888004 -8411002 - L3 LINE CR1 -769 808 688 3885 206 55 48 chrX_random 888478 889054 -8409952 - L1MD2 LINE L1 -18 6735 6144 889 145 0 0 chrX_random 889054 889185 -8409821 - AluJ SINE Alu -171 131 1 3885 206 55 48 chrX_random 889185 889723 -8409283 - L1MD2 LINE L1 -609 6144 5611 715 207 58 52 chrX_random 889726 890069 -8408937 - L1MD2 LINE L1 -3466 3074 2730 268 226 7 20 chrX_random 890070 890216 -8408790 + (TA)n Simple_repeat Simple_repeat 2 145 0 585 238 44 6 chrX_random 890346 890527 -8408479 - L1MD2 LINE L1 -3960 2580 2393 2733 282 62 82 chrX_random 890722 892611 -8406395 - L1MD2 LINE L1 -4645 1895 44 2441 80 0 0 chrX_random 892611 892912 -8406094 - AluSq SINE Alu -12 301 1 2733 282 62 82 chrX_random 892912 892939 -8406067 - L1MD2 LINE L1 -6496 44 18 2809 104 10 0 chrX_random 943160 943575 -8355431 + L1PA8 LINE L1 5745 6163 -9 1125 125 11 17 chrX_random 943609 943785 -8355221 + AluSg/x SINE Alu 129 303 -9 2870 157 74 13 chrX_random 943787 944650 -8354356 + L1M1 LINE L1 3075 3968 -3597 4997 104 3 14 chrX_random 945097 945874 -8353132 - L1MA2 LINE L1 0 6304 5537 279 0 0 0 chrX_random 946344 946376 -8352630 + (TTTA)n Simple_repeat Simple_repeat 1 63 0 279 0 0 0 chrX_random 946376 946407 -8352599 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2285 93 0 0 chrX_random 946409 946700 -8352306 - AluSx SINE Alu -21 291 1 322 282 40 0 chrX_random 946720 946844 -8352162 - L1ME4a LINE L1 -2 6119 5991 24 32 0 0 chrX_random 947598 947629 -8351377 + AT_rich Low_complexity Low_complexity 1 31 0 244 354 45 39 chrX_random 948039 948217 -8350789 - MIR SINE MIR -64 198 20 1979 158 45 83 chrX_random 948232 948337 -8350669 + MER66B LTR ERV1 1 108 -378 2258 105 20 0 chrX_random 948337 948643 -8350363 - AluSx SINE Alu 0 312 1 1979 158 45 83 chrX_random 948643 949042 -8349964 + MER66B LTR ERV1 108 486 0 236 120 20 0 chrX_random 949549 949599 -8349407 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 982 86 7 0 chrX_random 949794 949934 -8349072 + L1M1 LINE L1 5652 5792 -512 * 8247 187 35 6 chrX_random 949933 951703 -8347303 - L1 LINE L1 -894 6671 4851 1173 188 80 67 chrX_random 951737 952292 -8346714 - LTR22B LTR ERVK 0 492 1 2022 197 176 11 chrX_random 952292 952906 -8346100 - L1 LINE L1 -2709 4856 4142 753 104 9 0 chrX_random 953019 953125 -8345881 - U6 snRNA snRNA 0 107 1 10484 154 32 4 chrX_random 953125 954906 -8344100 - L1 LINE L1 -4481 3084 1254 213 65 0 0 chrX_random 955617 955648 -8343358 + (CA)n Simple_repeat Simple_repeat 2 32 0 240 182 61 0 chrX_random 955692 955758 -8343248 + T-rich Low_complexity Low_complexity 1 70 0 4113 116 3 0 chrX_random 955762 956365 -8342641 - L1PA16 LINE L1 -9 6157 5553 397 326 56 14 chrX_random 957012 957156 -8341850 - MER5A DNA MER1_type 0 189 40 2095 110 7 7 chrX_random 957183 957483 -8341523 - AluSg SINE Alu -10 300 1 191 222 273 20 chrX_random 957553 957652 -8341354 + MER5A DNA MER1_type 43 166 -23 * 518 226 28 0 chrX_random 957577 957683 -8341323 - MER5A DNA MER1_type -77 112 4 24788 144 31 81 chrX_random 957782 961344 -8337662 + L1MA2 LINE L1 4 3742 -2562 2166 94 0 42 chrX_random 961344 961651 -8337355 + AluY SINE Alu 1 294 -17 24788 144 31 81 chrX_random 961651 962882 -8336124 + L1MA2 LINE L1 3742 4359 -1945 2288 76 0 17 chrX_random 962882 963183 -8335823 + AluY SINE Alu 5 300 -11 24788 144 31 81 chrX_random 963183 965037 -8333969 + L1MA2 LINE L1 4359 6304 0 1798 188 14 0 chrX_random 965236 965581 -8333425 + L1PB4 LINE L1 5804 6153 -3 190 341 130 29 chrX_random 966521 966659 -8332347 - L2 LINE L2 -205 3067 2916 5108 176 21 14 chrX_random 966660 967580 -8331426 + L1PA13 LINE L1 1140 2065 -4722 1330 103 0 11 chrX_random 967580 967765 -8331241 + AluY SINE Alu 39 221 -90 261 0 0 0 chrX_random 967904 967933 -8331073 + (T)n Simple_repeat Simple_repeat 1 29 0 2033 212 2 7 chrX_random 967933 968390 -8330616 - L1 LINE L1 -1439 4707 4253 374 276 8 24 chrX_random 968380 968467 -8330539 + L1 LINE L1 2964 3050 -3096 * 2046 140 3 10 chrX_random 968467 968775 -8330231 + AluSx SINE Alu 2 307 -5 374 276 8 24 chrX_random 968775 968814 -8330192 + L1 LINE L1 3050 3088 -3058 11597 74 18 7 chrX_random 968814 970415 -8328591 - L1P LINE L1 -3385 2761 1143 6982 58 2 3 chrX_random 970419 971665 -8327341 + L1PA6 LINE L1 4910 6154 0 4549 240 22 3 chrX_random 971674 972802 -8326204 + L1P LINE L1 3095 4243 -1903 1125 199 14 7 chrX_random 972800 973068 -8325938 - L1M3 LINE L1 -570 5613 5352 * 599 251 20 12 chrX_random 973546 973713 -8325293 + MIR SINE MIR 93 262 0 227 337 11 0 chrX_random 973937 974026 -8324980 + L1MC4 LINE L1 6614 6703 -1339 * 237 264 11 22 chrX_random 973998 974089 -8324917 - L1MC4 LINE L1 -1339 6703 6614 408 314 85 5 chrX_random 974774 974997 -8324009 - L1MEd LINE L1 -5099 1020 780 378 291 55 0 chrX_random 975118 975228 -8323778 - MIR SINE MIR -111 151 36 267 308 58 17 chrX_random 975688 975808 -8323198 - MIR SINE MIR -110 152 28 282 95 0 0 chrX_random 976400 976442 -8322564 + (CA)n Simple_repeat Simple_repeat 2 43 0 191 36 36 0 chrX_random 976443 976471 -8322535 + (TA)n Simple_repeat Simple_repeat 2 30 0 466 268 134 6 chrX_random 976558 976722 -8322284 - MER5A DNA MER1_type 0 189 5 311 343 29 7 chrX_random 977922 978059 -8320947 - MER69A DNA AcHobo -36 141 2 1544 193 17 60 chrX_random 978629 978982 -8320024 - MLT1B LTR MaLR -52 338 1 4640 111 32 6 chrX_random 979120 979843 -8319163 + L1MA1 LINE L1 5560 6301 -1 718 197 7 0 chrX_random 979854 980001 -8319005 + L1MB7 LINE L1 5474 5621 -563 655 167 18 0 chrX_random 980001 980109 -8318897 + L1MC1 LINE L1 6218 6333 0 2342 206 36 4 chrX_random 980109 980662 -8318344 + L1MB7 LINE L1 5605 6176 -8 339 274 0 20 chrX_random 981045 981147 -8317859 - MER5A DNA MER1_type -81 108 9 283 266 133 71 chrX_random 981541 981849 -8317157 + L1MD3 LINE L1 31 357 -5688 1434 194 70 85 chrX_random 981932 982334 -8316672 - MSTD LTR MaLR 0 396 1 285 146 0 0 chrX_random 982426 982474 -8316532 + (A)n Simple_repeat Simple_repeat 1 48 0 1977 239 74 36 chrX_random 982528 983287 -8315719 + L1MD3 LINE L1 4649 5436 -1128 201 213 0 0 chrX_random 983300 983347 -8315659 + (TA)n Simple_repeat Simple_repeat 2 48 0 773 259 19 8 chrX_random 983351 983610 -8315396 + L1MD3 LINE L1 5557 5818 -746 * 1785 264 82 50 chrX_random 983607 983670 -8315336 + L1MD3 LINE L1 6023 6083 -2330 1678 107 0 8 chrX_random 983670 983922 -8315084 + L1PB1 LINE L1 5899 6148 -3 1785 264 82 50 chrX_random 983922 984808 -8314198 + L1MD3 LINE L1 6083 7002 -1411 830 161 43 27 chrX_random 985198 985384 -8313622 + L1MA9 LINE L1 6124 6312 0 2297 88 3 11 chrX_random 986449 986868 -8312138 - L1M1 LINE L1 -737 5565 5150 931 195 44 0 chrX_random 986879 987117 -8311889 - L1M4 LINE L1 -699 5479 5232 474 309 48 10 chrX_random 987117 987324 -8311682 - L1M4 LINE L1 -2225 3921 3707 252 290 105 41 chrX_random 987601 988163 -8310843 + L1M4 LINE L1 3240 3837 -2309 29 60 0 0 chrX_random 988163 988213 -8310793 + AT_rich Low_complexity Low_complexity 1 50 0 346 306 77 10 chrX_random 988561 988757 -8310249 + HAL1b LINE L1 376 584 -764 9487 79 6 11 chrX_random 988789 990869 -8308137 + L1PA7 LINE L1 4089 6164 0 210 162 0 0 chrX_random 990878 990915 -8308091 + A-rich Low_complexity Low_complexity 1 37 0 319 280 30 10 chrX_random 990998 991098 -8307908 + HAL1b LINE L1 760 861 -487 31 0 0 0 chrX_random 991489 991520 -8307486 + AT_rich Low_complexity Low_complexity 1 31 0 438 326 0 15 chrX_random 991605 991740 -8307266 + L2 LINE L2 3179 3311 -2 27 0 0 0 chrX_random 992057 992084 -8306922 + AT_rich Low_complexity Low_complexity 1 27 0 16756 187 29 10 chrX_random 992092 995251 -8303755 + L1M1 LINE L1 19 3237 -4328 16240 171 17 11 chrX_random 995366 998787 -8300219 + L1PA13 LINE L1 3466 6910 -672 2364 83 0 0 chrX_random 998787 999088 -8299918 + AluSc SINE Alu 1 301 -8 16240 171 17 11 chrX_random 999088 999766 -8299240 + L1PA13 LINE L1 6910 7582 0 287 310 65 47 chrX_random 1000114 1000346 -8298660 - L2 LINE L2 -933 2381 2146 2822 169 40 0 chrX_random 1001415 1001937 -8297069 - L1MC1 LINE L1 0 6333 5791 916 164 18 111 chrX_random 1001958 1002183 -8296823 + MLT1A1 LTR MaLR 162 365 0 192 262 93 84 chrX_random 1002187 1002294 -8296712 - L2 LINE L2 -28 3285 3178 671 290 82 50 chrX_random 1002311 1002628 -8296378 - L2 LINE L2 -107 3206 2880 205 362 33 13 chrX_random 1003633 1003785 -8295221 - MIR SINE MIR -68 194 40 204 115 0 0 chrX_random 1005031 1005057 -8293949 + (T)n Simple_repeat Simple_repeat 1 26 0 207 0 0 0 chrX_random 1005399 1005422 -8293584 + (T)n Simple_repeat Simple_repeat 1 23 0 1328 291 19 5 chrX_random 1005422 1005797 -8293209 + LTR16C LTR ERVL 112 491 0 424 273 72 0 chrX_random 1006417 1006556 -8292450 - MER5C DNA MER1_type 0 324 176 358 316 17 31 chrX_random 1008736 1008906 -8290100 + MLT1J2 LTR MaLR 64 251 -260 1265 216 12 4 chrX_random 1010365 1010619 -8288387 + L1MA2 LINE L1 1330 1585 -5980 * 5253 125 31 75 chrX_random 1010617 1011710 -8287296 + L1MA2 LINE L1 2045 3089 -4476 13315 197 31 9 chrX_random 1011813 1015174 -8283832 + L1MA2 LINE L1 3321 6756 -818 25 0 0 0 chrX_random 1015178 1015203 -8283803 + AT_rich Low_complexity Low_complexity 1 25 0 5449 148 35 1 chrX_random 1015290 1016264 -8282742 + L1MA2 LINE L1 6739 7723 0 21 57 0 0 chrX_random 1016685 1016720 -8282286 + AT_rich Low_complexity Low_complexity 1 35 0 269 309 84 53 chrX_random 1018999 1019040 -8279966 - MIR3 SINE MIR -27 235 197 756 159 43 0 chrX_random 1019040 1019178 -8279828 - L1PA13 LINE L1 0 6163 6020 269 309 84 53 chrX_random 1019178 1019369 -8279637 - MIR3 SINE MIR -65 197 1 2279 102 0 3 chrX_random 1019484 1019797 -8279209 - AluSq SINE Alu -1 312 1 38 61 0 0 chrX_random 1020043 1020109 -8278897 + AT_rich Low_complexity Low_complexity 1 66 0 1234 182 70 102 chrX_random 1020150 1020551 -8278455 - MLT1B LTR MaLR -2 388 1 21 0 0 0 chrX_random 1020594 1020615 -8278391 + AT_rich Low_complexity Low_complexity 1 21 0 23 68 0 0 chrX_random 1023394 1023438 -8275568 + AT_rich Low_complexity Low_complexity 1 44 0 25 0 0 0 chrX_random 1024031 1024056 -8274950 + AT_rich Low_complexity Low_complexity 1 25 0 2562 187 45 22 chrX_random 1024061 1024596 -8274410 - MLT2B3 LTR ERVL -7 547 1 21 0 0 0 chrX_random 1024660 1024681 -8274325 + AT_rich Low_complexity Low_complexity 1 21 0 261 322 59 17 chrX_random 1025200 1025318 -8273688 - MIR3 SINE MIR -48 160 38 1763 181 24 134 chrX_random 1027464 1027680 -8271326 + MLT2B3 LTR ERVL 3 241 -313 189 74 0 0 chrX_random 1027680 1027707 -8271299 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 1763 181 24 134 chrX_random 1027707 1028050 -8270956 + MLT2B3 LTR ERVL 241 490 -64 405 58 0 0 chrX_random 1028050 1028102 -8270904 + (TG)n Simple_repeat Simple_repeat 1 52 0 1763 181 24 134 chrX_random 1028102 1028161 -8270845 + MLT2B3 LTR ERVL 490 554 0 22 0 0 0 chrX_random 1029328 1029350 -8269656 + AT_rich Low_complexity Low_complexity 1 22 0 2218 68 0 7 chrX_random 1029746 1030025 -8268981 - AluSq SINE Alu -2 311 35 2212 182 20 29 chrX_random 1030944 1031433 -8267573 - MER31A LTR ERV1 0 485 1 316 355 135 28 chrX_random 1031584 1031866 -8267140 + L2 LINE L2 2563 2874 -440 363 44 0 0 chrX_random 1031870 1031915 -8267091 + (TG)n Simple_repeat Simple_repeat 2 46 0 5345 192 94 9 chrX_random 1032221 1033347 -8265659 - L1M1 LINE L1 -6307 1258 62 292 281 52 48 chrX_random 1033496 1033706 -8265300 - L1ME LINE L1 -374 5747 5537 1276 204 47 25 chrX_random 1033767 1034042 -8264964 + AluJo SINE Alu 15 295 -17 23 0 0 0 chrX_random 1034237 1034260 -8264746 + AT_rich Low_complexity Low_complexity 1 23 0 1062 153 23 42 chrX_random 1034708 1034924 -8264082 - L1MA9 LINE L1 -38 6274 6063 682 271 52 10 chrX_random 1035195 1035483 -8263523 - HAL1 LINE L1 -831 1676 1377 302 205 0 39 chrX_random 1035491 1035569 -8263437 + L1MCa LINE L1 1995 2069 -4357 4241 168 19 2 chrX_random 1035602 1036772 -8262234 - L1PB4 LINE L1 -12 6144 4935 2391 200 47 17 chrX_random 1036772 1037351 -8261655 - L1PB4 LINE L1 -1497 4649 4054 * 2578 190 31 30 chrX_random 1037320 1037995 -8261011 - L1PB4 LINE L1 -2532 3614 2939 244 292 97 60 chrX_random 1037992 1038496 -8260510 - HAL1 LINE L1 -1160 1347 825 * 222 213 0 0 chrX_random 1039951 1039998 -8259008 + (CATATA)n Simple_repeat Simple_repeat 2 48 0 29 47 0 0 chrX_random 1039998 1040041 -8258965 + AT_rich Low_complexity Low_complexity 1 43 0 180 0 0 0 chrX_random 1040137 1040157 -8258849 + (TAA)n Simple_repeat Simple_repeat 2 21 0 23 0 0 0 chrX_random 1040972 1040995 -8258011 + AT_rich Low_complexity Low_complexity 1 23 0 413 284 93 55 chrX_random 1041020 1041104 -8257902 + HAL1 LINE L1 2238 2317 -190 1766 230 42 32 chrX_random 1041104 1041600 -8257406 + MLT1D LTR MaLR 5 505 0 413 284 93 55 chrX_random 1041600 1041772 -8257234 + HAL1 LINE L1 2317 2504 -3 3049 246 129 84 chrX_random 1042288 1042796 -8256210 - L1MC3 LINE L1 -33 7752 7268 299 288 25 0 chrX_random 1042796 1042876 -8256130 - MLT1F1 LTR MaLR -433 134 53 3049 246 129 84 chrX_random 1042876 1043950 -8255056 - L1MC3 LINE L1 -517 7268 6017 28 79 0 0 chrX_random 1044395 1044458 -8254548 + AT_rich Low_complexity Low_complexity 1 63 0 605 142 44 9 chrX_random 1044482 1044504 -8254502 - L1MA9 LINE L1 -22 6290 6269 2574 159 76 25 chrX_random 1044504 1045061 -8253945 - L1MA9 LINE L1 -44 6122 5582 1054 133 0 0 chrX_random 1045876 1046068 -8252938 - AluSg/x SINE Alu 0 324 133 1564 221 46 79 chrX_random 1047974 1048491 -8250515 - MLT1E1 LTR MaLR 0 654 155 611 224 92 20 chrX_random 1048505 1048657 -8250349 - MER20 DNA MER1_type -54 165 3 254 305 123 31 chrX_random 1048658 1049298 -8249708 + L1M4 LINE L1 2272 2970 -3176 336 289 70 13 chrX_random 1049674 1049972 -8249034 + L1M4 LINE L1 3141 3455 -2691 2009 94 0 14 chrX_random 1050209 1050486 -8248520 + AluSg SINE Alu 31 303 -7 801 347 71 64 chrX_random 1050510 1051733 -8247273 + L1M4 LINE L1 3788 5019 -1127 22 99 0 0 chrX_random 1051753 1051824 -8247182 + AT_rich Low_complexity Low_complexity 1 71 0 9461 143 14 33 chrX_random 1051829 1053416 -8245590 - THE1-int LTR MaLR -20 1560 4 2129 186 36 0 chrX_random 1053418 1053859 -8245147 - L1 LINE L1 -1767 5798 5342 1618 157 8 8 chrX_random 1053859 1054127 -8244879 - L1 LINE L1 -6424 1141 874 24 32 0 0 chrX_random 1054833 1054864 -8244142 + AT_rich Low_complexity Low_complexity 1 31 0 552 280 161 14 chrX_random 1055787 1056005 -8243001 + MIR SINE MIR 2 251 -11 531 78 0 26 chrX_random 1057275 1057352 -8241654 + MADE1 DNA Mariner 6 80 0 188 200 0 67 chrX_random 1057565 1057625 -8241381 - L2 LINE L2 -1254 2060 2005 398 312 22 7 chrX_random 1057751 1057889 -8241117 - MIR SINE MIR -109 153 14 25 31 0 0 chrX_random 1057912 1057944 -8241062 + AT_rich Low_complexity Low_complexity 1 32 0 369 0 0 0 chrX_random 1058049 1058090 -8240916 + (CA)n Simple_repeat Simple_repeat 1 41 0 2332 137 8 3 chrX_random 1058356 1058715 -8240291 + THE1B LTR MaLR 3 363 -1 10181 95 30 57 chrX_random 1058716 1060340 -8238666 + THE1B-int LTR MaLR 1 1580 0 2397 130 11 3 chrX_random 1060340 1060701 -8238305 + THE1B LTR MaLR 1 364 0 23 54 0 0 chrX_random 1063113 1063150 -8235856 + AT_rich Low_complexity Low_complexity 1 37 0 2493 57 0 0 chrX_random 1063335 1063634 -8235372 - AluY SINE Alu -12 299 1 23 33 0 0 chrX_random 1063643 1063673 -8235333 + AT_rich Low_complexity Low_complexity 1 30 0 6396 83 18 9 chrX_random 1063705 1064688 -8234318 - L1PA11 LINE L1 0 6174 5175 502 347 117 6 chrX_random 1065243 1065595 -8233411 + LTR16A LTR ERVL 60 450 0 2108 169 32 43 chrX_random 1068325 1068762 -8230244 + MSTB1 LTR MaLR 1 432 0 2008 135 132 5 chrX_random 1069559 1069938 -8229068 + MSTA LTR MaLR 2 428 0 347 273 65 32 chrX_random 1071153 1071230 -8227776 + L1MC4 LINE L1 7238 7311 -731 1055 155 49 45 chrX_random 1071230 1071475 -8227531 + L1MB7 LINE L1 5927 6172 -12 347 273 65 32 chrX_random 1071475 1071551 -8227455 + L1MC4 LINE L1 7311 7396 -646 21 0 0 0 chrX_random 1071886 1071907 -8227099 + AT_rich Low_complexity Low_complexity 1 21 0 251 333 61 32 chrX_random 1072331 1072577 -8226429 - LTR16A1 LTR ERVL -61 396 144 754 329 138 36 chrX_random 1073168 1073800 -8225206 + L3 LINE CR1 634 1329 -248 770 317 131 26 chrX_random 1075631 1076296 -8222710 + L2 LINE L2 1960 2694 -620 2265 58 41 3 chrX_random 1076296 1076587 -8222419 - AluY SINE Alu -9 302 1 382 363 9 0 chrX_random 1076985 1077098 -8221908 + L2 LINE L2 3155 3268 -4 2287 79 10 7 chrX_random 1077312 1077615 -8221391 + AluSc SINE Alu 1 304 -5 236 250 28 0 chrX_random 1077918 1077990 -8221016 + (TTA)n Simple_repeat Simple_repeat 3 76 0 24 0 0 0 chrX_random 1078056 1078080 -8220926 + AT_rich Low_complexity Low_complexity 1 24 0 386 355 17 12 chrX_random 1078208 1078380 -8220626 - MIR SINE MIR -1 261 89 318 237 89 37 chrX_random 1078973 1079108 -8219898 - MER119 DNA MER1_type -1 582 441 * 342 268 87 39 chrX_random 1079091 1079218 -8219788 - MER119 DNA MER1_type -450 133 1 317 247 25 12 chrX_random 1080401 1080482 -8218524 + MIR3 SINE MIR 75 156 -52 470 220 23 15 chrX_random 1081432 1081564 -8217442 - L1MA7 LINE L1 -4 6287 6155 * 3441 194 36 10 chrX_random 1081556 1082024 -8216982 - L1MA8 LINE L1 -235 6056 5602 2063 118 0 0 chrX_random 1082024 1082348 -8216658 - AluSg SINE Alu 0 324 1 3441 194 36 10 chrX_random 1082348 1082367 -8216639 - L1MA8 LINE L1 -689 5602 5585 3607 147 30 2 chrX_random 1082367 1082993 -8216013 - L1PA16 LINE L1 -9 6157 5514 1589 22 0 0 chrX_random 1083001 1083186 -8215820 - L1PA4 LINE L1 0 6155 5971 3441 194 36 10 chrX_random 1083186 1083644 -8215362 - L1MA8 LINE L1 -712 5579 5070 266 227 191 0 chrX_random 1083801 1083911 -8215095 - L1ME4a LINE L1 -23 6098 5968 363 344 46 0 chrX_random 1084103 1084234 -8214772 - MIR SINE MIR -107 155 19 222 128 0 0 chrX_random 1084258 1084297 -8214709 + (TG)n Simple_repeat Simple_repeat 2 40 0 1936 179 0 12 chrX_random 1084379 1084704 -8214302 - MLT1A1 LTR MaLR 0 365 45 1261 228 48 3 chrX_random 1084715 1085031 -8213975 - L1MA9 LINE L1 0 6312 5983 248 294 26 98 chrX_random 1085248 1085442 -8213564 - L1M3a LINE L1 -5775 180 1 308 109 0 55 chrX_random 1085449 1085504 -8213502 - MLT1A1 LTR MaLR -312 53 2 6003 227 39 68 chrX_random 1085505 1087226 -8211780 - MLT1B-int LTR MaLR 0 1735 110 340 192 68 0 chrX_random 1087218 1087291 -8211715 - MLT-int LTR MaLR -1506 229 152 * 1072 160 35 48 chrX_random 1087291 1087522 -8211484 - MLT1A1-int LTR MaLR -1506 229 2 962 163 0 12 chrX_random 1087526 1087686 -8211320 - MLT1A1 LTR MaLR -2 363 206 385 284 155 40 chrX_random 1087706 1088002 -8211004 - HAL1 LINE L1 -1434 1073 744 291 272 72 24 chrX_random 1088280 1088405 -8210601 + MIR SINE MIR 117 247 -15 23 33 0 0 chrX_random 1088517 1088547 -8210459 + AT_rich Low_complexity Low_complexity 1 30 0 27 49 0 0 chrX_random 1088828 1088869 -8210137 + AT_rich Low_complexity Low_complexity 1 41 0 327 341 28 34 chrX_random 1089578 1089754 -8209252 + L2 LINE L2 2457 2631 -683 319 390 102 43 chrX_random 1089951 1090371 -8208635 + L2 LINE L2 2828 3272 0 1850 284 60 8 chrX_random 1090937 1091454 -8207552 - REP3 LTR ERV -18 544 1 204 239 0 0 chrX_random 1092470 1092516 -8206490 - MIR SINE MIR -12 250 205 2250 98 10 0 chrX_random 1093437 1093743 -8205263 - AluSc SINE Alu 0 309 1 23 54 0 0 chrX_random 1093933 1093970 -8205036 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chrX_random 1095135 1095156 -8203850 + AT_rich Low_complexity Low_complexity 1 21 0 3827 255 63 35 chrX_random 1095381 1096221 -8202785 - L1M4b LINE L1 -2369 4588 3773 2075 120 3 0 chrX_random 1096221 1096505 -8202501 - AluSq SINE Alu -26 287 3 3827 255 63 35 chrX_random 1096505 1097200 -8201806 - L1M4b LINE L1 -3184 3773 3099 2465 181 27 16 chrX_random 1097200 1097374 -8201632 - L1MA10 LINE L1 0 6334 6163 180 0 0 0 chrX_random 1097374 1097394 -8201612 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 2465 181 27 16 chrX_random 1097394 1097770 -8201236 - L1MA10 LINE L1 -171 6163 5778 3827 255 63 35 chrX_random 1097770 1098230 -8200776 - L1M4b LINE L1 -3858 3099 2583 1604 219 18 25 chrX_random 1098230 1098623 -8200383 - MLT1B LTR MaLR 0 390 1 3827 255 63 35 chrX_random 1098623 1098730 -8200276 - L1M4b LINE L1 -4374 2583 2480 4414 263 76 34 chrX_random 1098752 1100570 -8198436 - L1M4b LINE L1 -4949 1906 21 570 286 104 20 chrX_random 1100579 1101132 -8197874 - L1M4 LINE L1 -3778 2866 2283 1212 56 31 0 chrX_random 1101167 1101329 -8197677 - BC200 scRNA scRNA -33 167 1 1634 268 43 63 chrX_random 1101407 1102274 -8196732 - L1M4 LINE L1 -4554 2092 1244 1056 275 78 59 chrX_random 1102346 1102888 -8196118 - L1M4 LINE L1 -5964 578 27 18280 27 1 0 chrX_random 1102900 1105849 -8193157 - L1PA3 LINE L1 0 6155 3205 279 0 0 0 chrX_random 1306395 1306426 -7992580 + (A)n Simple_repeat Simple_repeat 1 31 0 334 267 159 11 chrX_random 1306492 1306668 -7992338 + L1ME3 LINE L1 5311 5512 -652 1814 179 0 0 chrX_random 1306701 1307013 -7991993 + AluJo SINE Alu 1 312 0 387 300 44 20 chrX_random 1307018 1307291 -7991715 + L1ME3 LINE L1 5594 5883 -279 2522 54 3 0 chrX_random 1307298 1307596 -7991410 + AluY SINE Alu 1 299 -12 28 0 0 0 chrX_random 1308104 1308132 -7990874 + AT_rich Low_complexity Low_complexity 1 28 0 596 124 21 10 chrX_random 1308619 1308716 -7990290 + MER4A LTR ERV1 1 98 -566 1494 164 184 42 chrX_random 1308716 1309070 -7989936 + MER4A LTR ERV1 261 664 0 203 171 0 0 chrX_random 1309078 1309119 -7989887 + GA-rich Low_complexity Low_complexity 1 41 0 791 154 0 28 chrX_random 1310016 1310159 -7988847 - LTR7 LTR ERV1 -311 139 1 22 0 0 0 chrX_random 1310189 1310211 -7988795 + AT_rich Low_complexity Low_complexity 1 22 0 2308 114 29 24 chrX_random 1310284 1310662 -7988344 + Tigger2a DNA MER2_type 1 380 -54 2272 88 3 7 chrX_random 1311195 1311500 -7987506 - AluSc SINE Alu -5 304 1 2228 135 106 34 chrX_random 1313502 1313898 -7985108 - L1PA16 LINE L1 -45 6121 5688 2298 90 13 3 chrX_random 1313898 1314199 -7984807 - AluSc SINE Alu -5 304 1 2228 135 106 34 chrX_random 1314199 1314245 -7984761 - L1PA16 LINE L1 -478 5688 5647 23 86 0 0 chrX_random 1314270 1314328 -7984678 + AT_rich Low_complexity Low_complexity 1 58 0 571 213 0 0 chrX_random 1315177 1315285 -7983721 - AluJb SINE Alu -23 289 182 2068 179 25 0 chrX_random 1315419 1315811 -7983195 + MER57A LTR ERV1 2 403 0 253 173 13 40 chrX_random 1315814 1315889 -7983117 + (TATATG)n Simple_repeat Simple_repeat 5 77 0 279 257 17 0 chrX_random 1315897 1316084 -7982922 + (TA)n Simple_repeat Simple_repeat 1 190 0 358 330 30 35 chrX_random 1316120 1316317 -7982689 + MIR SINE MIR 43 238 -24 1231 184 9 0 chrX_random 1317572 1317789 -7981217 - AluJo SINE Alu -7 305 87 1373 188 120 0 chrX_random 1317932 1318198 -7980808 - AluJb SINE Alu -14 298 1 222 37 0 0 chrX_random 1319105 1319132 -7979874 + (TG)n Simple_repeat Simple_repeat 1 27 0 203 79 26 0 chrX_random 1319821 1319859 -7979147 + (TCTA)n Simple_repeat Simple_repeat 2 40 0 681 210 0 37 chrX_random 1319879 1319891 -7979115 - AluJo/FRAM SINE Alu -9 303 292 1955 143 4 4 chrX_random 1319891 1320170 -7978836 - AluSx SINE Alu -33 279 1 681 210 0 37 chrX_random 1320170 1320319 -7978687 - AluJo/FRAM SINE Alu -20 292 148 237 65 0 0 chrX_random 1320341 1320372 -7978634 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 6442 198 10 26 chrX_random 1320375 1321064 -7977942 - L1PA15 LINE L1 -5 6160 5462 2338 70 0 17 chrX_random 1321064 1321364 -7977642 - AluY SINE Alu -16 295 1 6442 198 10 26 chrX_random 1321364 1321535 -7977471 - L1PA15 LINE L1 -703 5462 5290 1892 137 3 36 chrX_random 1321535 1321862 -7977144 - AluSx SINE Alu 0 312 1 6442 198 10 26 chrX_random 1321862 1323339 -7975667 - L1PA15 LINE L1 -875 5290 3867 281 322 167 60 chrX_random 1323343 1323859 -7975147 + L2 LINE L2 1268 1838 -1476 204 184 31 0 chrX_random 1325114 1325212 -7973794 + (TA)n Simple_repeat Simple_repeat 2 102 0 324 0 0 0 chrX_random 1325262 1325298 -7973708 + (CA)n Simple_repeat Simple_repeat 2 37 0 651 173 48 7 chrX_random 1325299 1325416 -7973590 + (TCTA)n Simple_repeat Simple_repeat 1 112 -496 2235 131 0 0 chrX_random 1325416 1325728 -7973278 - AluSx SINE Alu 0 312 1 651 173 48 7 chrX_random 1325728 1325884 -7973122 + (TCTA)n Simple_repeat Simple_repeat 112 608 0 581 73 85 18 chrX_random 1325939 1326103 -7972903 + (TCTA)n Simple_repeat Simple_repeat 3 177 0 729 102 40 23 chrX_random 1326123 1326300 -7972706 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 200 125 25 25 chrX_random 1326367 1326407 -7972599 + CT-rich Low_complexity Low_complexity 2 41 0 26 0 0 0 chrX_random 1328068 1328094 -7970912 + AT_rich Low_complexity Low_complexity 1 26 0 413 226 12 18 chrX_random 1328974 1329138 -7969868 + CT-rich Low_complexity Low_complexity 3 165 0 1393 221 46 14 chrX_random 1329424 1329795 -7969211 + L1MC3 LINE L1 7026 7408 -377 1794 135 3 30 chrX_random 1329795 1330150 -7968856 - MER4A LTR ERV1 0 664 261 270 129 400 0 chrX_random 1330150 1330220 -7968786 - MER4A LTR ERV1 -566 98 1 270 263 13 0 chrX_random 1330220 1330296 -7968710 + L1MC3 LINE L1 7405 7481 -304 833 166 11 17 chrX_random 1331634 1331956 -7967050 + CT-rich Low_complexity Low_complexity 1 320 0 995 178 0 0 chrX_random 1332199 1332351 -7966655 + AluJb SINE Alu 129 280 -32 26 0 0 0 chrX_random 1332352 1332378 -7966628 + AT_rich Low_complexity Low_complexity 1 26 0 507 213 110 55 chrX_random 1333468 1333632 -7965374 + MER58B DNA MER1_type 168 340 -1 300 111 0 0 chrX_random 1333892 1333937 -7965069 + (TA)n Simple_repeat Simple_repeat 1 45 0 392 329 117 49 chrX_random 1334017 1335014 -7963992 + L1 LINE L1 4128 5204 -942 1594 187 78 36 chrX_random 1335455 1335840 -7963166 - LTR2B LTR ERV1 -58 432 32 394 191 60 77 chrX_random 1335861 1335917 -7963089 + Charlie1 DNA MER1_type 2502 2557 -204 2284 101 0 3 chrX_random 1335917 1336225 -7962781 + AluSq SINE Alu 5 311 -2 394 191 60 77 chrX_random 1336225 1336403 -7962603 + Charlie1 DNA MER1_type 2557 2732 -29 326 153 36 29 chrX_random 1336425 1336562 -7962444 + (TCTA)n Simple_repeat Simple_repeat 1 138 0 2318 88 3 0 chrX_random 1336631 1336928 -7962078 - AluSx SINE Alu -14 298 1 411 284 100 50 chrX_random 1336961 1337200 -7961806 + MIR SINE MIR 5 255 -7 654 204 6 16 chrX_random 1337472 1337986 -7961020 + GA-rich Low_complexity Low_complexity 1 508 0 2643 197 16 25 chrX_random 1339421 1339970 -7959036 + L1PA16 LINE L1 5619 6162 -4 268 227 136 0 chrX_random 1339971 1340037 -7958969 + Tigger2 DNA MER2_type 2644 2718 0 2340 118 25 6 chrX_random 1340493 1340850 -7958156 + THE1B LTR MaLR 1 364 0 1164 243 25 97 chrX_random 1340933 1341488 -7957518 - L1ME3A LINE L1 -5 6165 5651 2168 119 39 30 chrX_random 1342168 1342529 -7956477 + THE1B LTR MaLR 1 364 0 360 320 74 27 chrX_random 1342605 1342861 -7956145 - ERVL LTR ERVL -1545 4219 3952 222 214 0 0 chrX_random 1344182 1344224 -7954782 + GA-rich Low_complexity Low_complexity 2 43 0 2211 104 14 0 chrX_random 1344332 1344621 -7954385 + AluSx SINE Alu 1 293 -19 201 143 0 0 chrX_random 1344870 1344905 -7954101 + (CAGA)n Simple_repeat Simple_repeat 3 37 0 796 176 6 6 chrX_random 1344905 1345081 -7953925 + GA-rich Low_complexity Low_complexity 3 178 0 770 167 21 0 chrX_random 1345092 1345329 -7953677 + GA-rich Low_complexity Low_complexity 1 242 0 1374 91 11 0 chrX_random 1346764 1346940 -7952066 + AluSx SINE Alu 2 179 -133 958 62 78 0 chrX_random 1347020 1347149 -7951857 + MER85 DNA T2_type 1 139 0 23 0 0 0 chrX_random 1347379 1347402 -7951604 + AT_rich Low_complexity Low_complexity 1 23 0 238 327 86 67 chrX_random 1348209 1348570 -7950436 - L2 LINE L2 0 3313 2946 2113 141 0 0 chrX_random 1348722 1349020 -7949986 - AluSx SINE Alu -14 298 1 29 78 0 0 chrX_random 1349851 1349915 -7949091 + AT_rich Low_complexity Low_complexity 1 64 0 318 132 0 0 chrX_random 1350239 1350292 -7948714 + (TG)n Simple_repeat Simple_repeat 2 54 0 2474 53 0 38 chrX_random 1350467 1350785 -7948221 + AluY SINE Alu 1 306 -5 970 126 6 55 chrX_random 1351328 1351352 -7947654 - L1MA2 LINE L1 -5 6299 6275 2561 105 6 3 chrX_random 1351352 1351713 -7947293 + THE1B LTR MaLR 3 364 0 970 126 6 55 chrX_random 1351713 1351870 -7947136 - L1MA2 LINE L1 -29 6275 6127 397 293 37 111 chrX_random 1351942 1352212 -7946794 + L2 LINE L2 969 1218 -2096 2245 146 3 5 chrX_random 1352277 1352647 -7946359 - L1PB4 LINE L1 -6 6150 5782 223 206 29 29 chrX_random 1352765 1352800 -7946206 + CT-rich Low_complexity Low_complexity 2 39 -30 1521 197 7 10 chrX_random 1352800 1353090 -7945916 - AluJb SINE Alu -23 289 1 223 206 29 29 chrX_random 1353090 1353122 -7945884 + CT-rich Low_complexity Low_complexity 38 69 0 790 75 47 31 chrX_random 1353845 1354101 -7944905 + (TCTA)n Simple_repeat Simple_repeat 1 260 0 21 57 0 0 chrX_random 1354608 1354643 -7944363 + AT_rich Low_complexity Low_complexity 1 35 0 3064 147 49 9 chrX_random 1354759 1355332 -7943674 - L1MA4 LINE L1 -5 6295 5700 884 140 6 13 chrX_random 1355534 1355691 -7943315 - L1MA4 LINE L1 -593 5710 5555 2126 140 19 22 chrX_random 1355698 1356063 -7942943 - THE1B LTR MaLR 0 364 1 2131 145 0 0 chrX_random 1356460 1356757 -7942249 + AluSx SINE Alu 1 297 -15 1246 154 13 18 chrX_random 1356896 1357123 -7941883 - MLT1B LTR MaLR -1 389 164 2269 96 0 3 chrX_random 1357140 1357432 -7941574 - AluSq SINE Alu -22 291 1 1631 184 0 27 chrX_random 1357449 1357743 -7941263 - AluJb SINE Alu -24 288 3 939 193 6 0 chrX_random 1357745 1357921 -7941085 - MLT1B LTR MaLR -213 177 1 1167 141 5 35 chrX_random 1358676 1358899 -7940107 - AluJb SINE Alu 0 306 90 1828 179 0 0 chrX_random 1359062 1359386 -7939620 + L1MA9 LINE L1 5464 5787 -525 606 123 29 29 chrX_random 1359396 1359567 -7939439 + (TCTA)n Simple_repeat Simple_repeat 4 174 0 634 130 11 43 chrX_random 1359610 1359794 -7939212 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 1266 228 72 70 chrX_random 1359795 1360265 -7938741 + L1MA9 LINE L1 5804 6274 -38 21 0 0 0 chrX_random 1360266 1360287 -7938719 + AT_rich Low_complexity Low_complexity 1 21 0 776 156 0 15 chrX_random 1360542 1360677 -7938329 + FLAM_C SINE Alu 1 133 -10 1590 160 0 70 chrX_random 1361699 1361999 -7937007 + AluJo SINE Alu 1 279 -33 357 24 0 0 chrX_random 1363324 1363366 -7935640 + (TA)n Simple_repeat Simple_repeat 1 42 0 780 130 22 29 chrX_random 1363476 1363614 -7935392 - AluJo SINE Alu -175 137 1 280 85 21 0 chrX_random 1364565 1364612 -7934394 - MADE1 DNA Mariner 0 80 33 207 100 0 0 chrX_random 1364872 1364902 -7934104 + (A)n Simple_repeat Simple_repeat 1 30 0 286 179 0 0 chrX_random 1365682 1365738 -7933268 + L1MA9 LINE L1 5943 5998 -170 1160 194 48 39 chrX_random 1365812 1365972 -7933034 + L1MA9 LINE L1 5995 6152 -160 459 0 0 0 chrX_random 1365972 1366023 -7932983 + (CA)n Simple_repeat Simple_repeat 1 51 0 1160 194 48 39 chrX_random 1366023 1366043 -7932963 + L1MA9 LINE L1 6152 6170 -142 2473 169 50 67 chrX_random 1366043 1366666 -7932340 - LTR9 LTR ERV1 0 612 1 1160 194 48 39 chrX_random 1366666 1366794 -7932212 + L1MA9 LINE L1 6170 6307 -5 23 0 0 0 chrX_random 1367341 1367364 -7931642 + AT_rich Low_complexity Low_complexity 1 23 0 723 118 31 16 chrX_random 1367474 1367711 -7931295 + (TCTA)n Simple_repeat Simple_repeat 1 240 0 868 139 10 19 chrX_random 1367749 1368066 -7930940 + (TCTA)n Simple_repeat Simple_repeat 1 313 0 467 182 7 26 chrX_random 1368089 1368243 -7930763 + (TCTA)n Simple_repeat Simple_repeat 3 153 0 439 186 258 8 chrX_random 1368251 1368375 -7930631 - Tigger2 DNA MER2_type 0 2718 2564 * 764 203 18 55 chrX_random 1368374 1368591 -7930415 - Tigger2 DNA MER2_type -2508 210 2 696 285 112 19 chrX_random 1369140 1369407 -7929599 - MLT1E LTR MaLR -11 582 291 731 136 32 16 chrX_random 1369903 1370028 -7928978 + FLAM_A SINE Alu 16 142 0 941 260 3 10 chrX_random 1370309 1370613 -7928393 + AluJo SINE Alu 1 302 0 219 69 0 0 chrX_random 1371030 1371059 -7927947 + (GA)n Simple_repeat Simple_repeat 1 29 0 186 357 50 21 chrX_random 1371093 1371233 -7927773 + MIR SINE MIR 48 191 -71 506 132 0 0 chrX_random 1371637 1371713 -7927293 + AluJ/FLAM SINE Alu 1 76 -236 2509 112 11 11 chrX_random 1371713 1372087 -7926919 + THE1C LTR MaLR 2 375 0 968 163 0 0 chrX_random 1372091 1372238 -7926768 + FRAM SINE Alu 27 173 -3 22 35 0 0 chrX_random 1373061 1373090 -7925916 + AT_rich Low_complexity Low_complexity 1 29 0 239 214 48 29 chrX_random 1373689 1373792 -7925214 + (CATATA)n Simple_repeat Simple_repeat 6 110 0 184 239 0 22 chrX_random 1374028 1374120 -7924886 + (TATATG)n Simple_repeat Simple_repeat 3 92 0 1680 179 7 0 chrX_random 1375583 1375862 -7923144 + AluJo SINE Alu 1 281 -31 245 29 0 29 chrX_random 1375866 1375901 -7923105 + (TAA)n Simple_repeat Simple_repeat 2 35 0 22 35 0 0 chrX_random 1376424 1376453 -7922553 + AT_rich Low_complexity Low_complexity 1 29 0 1716 155 52 0 chrX_random 1376453 1376724 -7922282 - AluJo SINE Alu -27 285 1 2180 110 0 0 chrX_random 1377356 1377657 -7921349 - AluSg SINE Alu -9 301 1 231 114 0 0 chrX_random 1377830 1377865 -7921141 + (GA)n Simple_repeat Simple_repeat 2 36 0 2690 97 20 5 chrX_random 1378236 1378640 -7920366 - L1PA13 LINE L1 0 6163 5754 2247 243 61 27 chrX_random 1379077 1379227 -7919779 + MER82 DNA MER2_type 7 150 -503 2137 129 0 7 chrX_random 1379227 1379530 -7919476 - AluSx SINE Alu -11 301 1 2247 243 61 27 chrX_random 1379530 1380004 -7919002 + MER82 DNA MER2_type 150 652 -1 1712 186 7 0 chrX_random 1380059 1380339 -7918667 - AluJo SINE Alu -30 282 1 214 299 0 15 chrX_random 1381160 1381227 -7917779 + CT-rich Low_complexity Low_complexity 2 67 0 191 311 54 14 chrX_random 1381509 1381583 -7917423 - MIR SINE MIR -32 230 154 2106 149 19 21 chrX_random 1381677 1382053 -7916953 - THE1C LTR MaLR 0 375 1 1220 150 0 0 chrX_random 1382626 1382806 -7916200 + AluJo SINE Alu 126 305 -7 26 30 0 0 chrX_random 1382956 1382989 -7916017 + AT_rich Low_complexity Low_complexity 1 33 0 2365 84 3 0 chrX_random 1383338 1383637 -7915369 - AluY SINE Alu -10 301 2 215 289 135 19 chrX_random 1384216 1384320 -7914686 - MIR SINE MIR -62 200 85 429 179 0 0 chrX_random 1384540 1384663 -7914343 + CT-rich Low_complexity Low_complexity 1 123 0 1205 106 6 0 chrX_random 1385400 1385561 -7913445 + AluSx SINE Alu 1 162 -150 1304 195 33 107 chrX_random 1385582 1385800 -7913206 + MLT1B LTR MaLR 1 175 -215 1689 196 0 22 chrX_random 1385800 1386117 -7912889 + AluJb SINE Alu 3 312 0 1304 195 33 107 chrX_random 1386117 1386319 -7912687 + MLT1B LTR MaLR 175 390 0 2148 121 13 66 chrX_random 1386662 1387058 -7911948 + THE1C LTR MaLR 1 375 0 227 167 19 19 chrX_random 1388384 1388438 -7910568 + (TTTA)n Simple_repeat Simple_repeat 2 55 0 263 104 45 15 chrX_random 1388481 1388548 -7910458 + (TAGA)n Simple_repeat Simple_repeat 2 70 0 311 218 20 20 chrX_random 1388564 1388665 -7910341 + (TAGA)n Simple_repeat Simple_repeat 2 102 0 213 218 0 0 chrX_random 1388698 1388776 -7910230 + (TA)n Simple_repeat Simple_repeat 1 78 0 2218 100 0 13 chrX_random 1388891 1389201 -7909805 - AluSg SINE Alu 0 310 5 1636 177 0 7 chrX_random 1389568 1389845 -7909161 + AluJo SINE Alu 1 275 -37 2308 94 0 0 chrX_random 1390267 1390566 -7908440 + AluY SINE Alu 1 299 -12 1543 200 0 4 chrX_random 1392871 1393182 -7905824 + AluJo SINE Alu 11 320 0 875 189 4 103 chrX_random 1393666 1393865 -7905141 + MER20 DNA MER1_type 1 173 -46 1669 184 3 48 chrX_random 1393865 1394074 -7904932 + L1PA16 LINE L1 5815 6003 -163 210 37 0 0 chrX_random 1394074 1394101 -7904905 + (CTAAA)n Simple_repeat Simple_repeat 3 29 0 1669 184 3 48 chrX_random 1394101 1394249 -7904757 + L1PA16 LINE L1 6003 6156 -10 875 189 4 103 chrX_random 1394249 1394292 -7904714 + MER20 DNA MER1_type 173 219 0 1200 116 0 12 chrX_random 1394812 1394984 -7904022 + FRAM SINE Alu 1 169 -7 24 0 0 0 chrX_random 1395096 1395120 -7903886 + AT_rich Low_complexity Low_complexity 1 24 0 3134 136 120 17 chrX_random 1395240 1395830 -7903176 - MER39B LTR ERV1 -2 651 1 477 159 0 6 chrX_random 1396816 1396923 -7902083 - AluJ/FRAM SINE Alu -35 277 105 335 200 140 20 chrX_random 1396931 1397031 -7901975 + MER58B DNA MER1_type 196 307 -34 2458 153 113 31 chrX_random 1397153 1397703 -7901303 - LTR49 LTR ERV1 0 595 1 4002 34 32 0 chrX_random 1397956 1398430 -7900576 - LTR2B LTR ERV1 0 490 2 2726 163 33 13 chrX_random 1398486 1399008 -7899998 + L1MA5 LINE L1 5511 6042 -258 23 0 0 0 chrX_random 1399112 1399135 -7899871 + AT_rich Low_complexity Low_complexity 1 23 0 854 128 0 23 chrX_random 1399392 1399525 -7899481 - FLAM_C SINE Alu -1 132 3 322 328 49 45 chrX_random 1399542 1399786 -7899220 + HERVL LTR ERVL 2314 2558 -3096 1300 244 0 25 chrX_random 1399989 1400309 -7898697 + AluJo SINE Alu 1 312 0 26 0 0 0 chrX_random 1400784 1400810 -7898196 + AT_rich Low_complexity Low_complexity 1 26 0 1037 122 12 0 chrX_random 1400810 1400974 -7898032 - L1PA14 LINE L1 -3 6158 5993 364 256 51 7 chrX_random 1402438 1402575 -7896431 - L1ME2 LINE L1 -17 6147 6005 888 285 106 7 chrX_random 1402631 1403120 -7895886 - L1ME2 LINE L1 -247 5917 5347 1789 171 38 43 chrX_random 1403127 1403472 -7895534 - MER7A DNA MER2_type -5 341 1 1066 293 50 33 chrX_random 1403475 1404150 -7894856 - L1ME2 LINE L1 -987 5159 4473 243 0 0 0 chrX_random 1404163 1404190 -7894816 + (TG)n Simple_repeat Simple_repeat 2 28 0 5843 60 11 4 chrX_random 1404195 1404946 -7894060 - MER4E LTR ERV1 -10 756 1 686 272 54 14 chrX_random 1405041 1405317 -7893689 - L1ME2 LINE L1 -1792 4354 4068 26 74 0 0 chrX_random 1405337 1405391 -7893615 + AT_rich Low_complexity Low_complexity 1 54 0 270 232 28 39 chrX_random 1406281 1406462 -7892544 + (TA)n Simple_repeat Simple_repeat 2 180 0 195 170 0 0 chrX_random 1406556 1406603 -7892403 + (TA)n Simple_repeat Simple_repeat 2 48 0 30 0 0 0 chrX_random 1406614 1406644 -7892362 + AT_rich Low_complexity Low_complexity 1 30 0 428 85 0 0 chrX_random 1406644 1406703 -7892303 + AluSp/q SINE Alu 235 293 -20 339 277 28 11 chrX_random 1406710 1406887 -7892119 + (TA)n Simple_repeat Simple_repeat 1 180 0 557 266 62 29 chrX_random 1407248 1407522 -7891484 - L1ME1 LINE L1 -74 6092 5810 4591 194 20 41 chrX_random 1407535 1408750 -7890256 - L1MC2 LINE L1 -26 6318 5127 676 309 77 16 chrX_random 1408924 1409497 -7889509 - L1MC2 LINE L1 -1646 4500 3893 1964 161 3 54 chrX_random 1409523 1409913 -7889093 - MLT1B LTR MaLR -19 371 2 1928 74 0 8 chrX_random 1410044 1410288 -7888718 + AluY SINE Alu 59 300 -11 455 72 24 36 chrX_random 1410365 1410448 -7888558 + (TTATA)n Simple_repeat Simple_repeat 1 82 0 3451 128 2 2 chrX_random 1410457 1410994 -7888012 + L1PA13 LINE L1 5624 6160 -3 513 0 0 0 chrX_random 1411985 1412042 -7886964 + (CA)n Simple_repeat Simple_repeat 2 58 0 2317 88 16 0 chrX_random 1412709 1413062 -7885944 - AluSx SINE Alu 0 358 1 560 287 76 41 chrX_random 1413624 1414054 -7884952 - L1ME2 LINE L1 -8 6158 5705 291 266 65 16 chrX_random 1414055 1414179 -7884827 - L2 LINE L2 -1505 1809 1680 1748 119 76 4 chrX_random 1414304 1414581 -7884425 + AluSx SINE Alu 1 297 -15 290 146 0 0 chrX_random 1414612 1414660 -7884346 - MLT2B1 LTR ERVL 0 397 350 185 230 7 37 chrX_random 1414695 1414830 -7884176 + (TA)n Simple_repeat Simple_repeat 2 132 0 402 245 0 0 chrX_random 1414936 1415087 -7883919 + (TA)n Simple_repeat Simple_repeat 1 151 0 915 278 65 13 chrX_random 1415092 1415401 -7883605 - MLT2B1 LTR ERVL -185 335 11 1470 175 0 8 chrX_random 1415536 1415787 -7883219 + AluJb SINE Alu 51 299 -13 1851 154 31 7 chrX_random 1416132 1416425 -7882581 - AluSx SINE Alu 0 312 13 2769 151 15 74 chrX_random 1417604 1418252 -7880754 - MER4B LTR ERV1 0 610 1 1958 147 3 0 chrX_random 1418476 1418769 -7880237 - AluSx SINE Alu -13 299 6 1867 209 114 23 chrX_random 1419038 1419209 -7879797 + L1MC3 LINE L1 7158 7312 -473 3351 133 34 0 chrX_random 1419209 1419745 -7879261 + MER41C LTR ERV1 1 554 0 1867 209 114 23 chrX_random 1419745 1420133 -7878873 + L1MC3 LINE L1 7312 7768 -17 1397 180 4 31 chrX_random 1420169 1420456 -7878550 + AluJo SINE Alu 30 309 0 21 0 0 0 chrX_random 1422110 1422131 -7876875 + AT_rich Low_complexity Low_complexity 1 21 0 257 323 160 30 chrX_random 1422467 1423122 -7875884 + L2 LINE L2 2458 3268 -45 2528 182 43 2 chrX_random 1423270 1423787 -7875219 + L1PB4 LINE L1 5611 6148 -8 1684 309 68 9 chrX_random 1424044 1425020 -7873986 - L1MEc LINE L1 -2964 3251 2257 1103 288 85 32 chrX_random 1425029 1425557 -7873449 - L1ME1 LINE L1 -5 6161 5606 269 166 58 13 chrX_random 1425717 1425938 -7873068 + (TCTA)n Simple_repeat Simple_repeat 1 267 -12 267 31 0 0 chrX_random 1425938 1425970 -7873036 + (TC)n Simple_repeat Simple_repeat 2 33 0 269 166 58 13 chrX_random 1425970 1425984 -7873022 + (TCTA)n Simple_repeat Simple_repeat 267 279 0 1746 165 11 0 chrX_random 1427404 1427683 -7871323 + AluJo SINE Alu 1 282 -30 2159 99 123 0 chrX_random 1427890 1428222 -7870784 - THE1C LTR MaLR -2 373 1 2573 136 24 31 chrX_random 1429489 1429826 -7869180 + L1PB3 LINE L1 5694 6029 -125 1886 141 41 0 chrX_random 1429826 1430117 -7868889 + AluSx SINE Alu 1 303 -9 2573 136 24 31 chrX_random 1430117 1430234 -7868772 + L1PB3 LINE L1 6029 6145 -9 981 77 0 0 chrX_random 1430820 1430950 -7868056 - MER41A LTR ERV1 -322 232 103 189 267 0 0 chrX_random 1430950 1431066 -7867940 + (TA)n Simple_repeat Simple_repeat 1 116 0 198 0 0 0 chrX_random 1432030 1432052 -7866954 + (TA)n Simple_repeat Simple_repeat 2 23 0 1309 102 49 4 chrX_random 1432189 1432415 -7866591 + L1MA8 LINE L1 6051 6286 -5 286 292 23 1 chrX_random 1432431 1432526 -7866480 + MLT1G LTR MaLR 46 185 -410 304 287 85 8 chrX_random 1432555 1432684 -7866322 + HAL1b LINE L1 606 744 -604 410 233 58 112 chrX_random 1432699 1432978 -7866028 + MLT1G LTR MaLR 156 382 -150 327 49 0 0 chrX_random 1433200 1433241 -7865765 + (CA)n Simple_repeat Simple_repeat 1 41 0 252 0 0 0 chrX_random 1434223 1434251 -7864755 + (CA)n Simple_repeat Simple_repeat 2 29 0 1917 173 0 0 chrX_random 1435226 1435565 -7863441 + AluJb SINE Alu 1 339 0 1046 70 5 47 chrX_random 1435582 1435797 -7863209 + (GAAA)n Simple_repeat Simple_repeat 1 205 0 2809 185 4 4 chrX_random 1435801 1436276 -7862730 - MER66B LTR ERV1 -10 476 2 211 184 41 0 chrX_random 1437170 1437219 -7861787 + A-rich Low_complexity Low_complexity 3 53 0 198 0 0 0 chrX_random 1438535 1438557 -7860449 + (A)n Simple_repeat Simple_repeat 1 22 0 1596 119 0 8 chrX_random 1438563 1438807 -7860199 - L1P LINE L1 -1407 4739 4498 923 166 4 0 chrX_random 1438854 1439327 -7859679 + (CAT)n Simple_repeat Simple_repeat 1 475 0 21 0 0 0 chrX_random 1440423 1440444 -7858562 + AT_rich Low_complexity Low_complexity 1 21 0 241 262 18 16 chrX_random 1440790 1440868 -7858138 + MIR SINE MIR 69 151 -57 1299 170 0 10 chrX_random 1441401 1441607 -7857399 - AluJo SINE Alu -26 286 83 25 65 0 0 chrX_random 1441634 1441680 -7857326 + AT_rich Low_complexity Low_complexity 1 46 0 340 255 108 10 chrX_random 1442879 1442981 -7856025 - MER5A DNA MER1_type 0 189 78 970 230 111 41 chrX_random 1443007 1443351 -7855655 - L1MA7 LINE L1 0 6291 5924 366 23 0 0 chrX_random 1444345 1444388 -7854618 + (CA)n Simple_repeat Simple_repeat 2 44 0 1961 171 42 0 chrX_random 1444685 1445042 -7853964 - MLT1B LTR MaLR -2 388 17 379 125 0 0 chrX_random 1445166 1445222 -7853784 + MLT1B LTR MaLR 335 390 0 369 62 0 0 chrX_random 1445353 1445401 -7853605 + (CA)n Simple_repeat Simple_repeat 2 49 0 2363 87 39 0 chrX_random 1445401 1445758 -7853248 + L1PA13 LINE L1 5793 6163 0 2580 79 14 3 chrX_random 1446423 1446778 -7852228 - L1PA13 LINE L1 -2 6161 5803 504 153 0 1 chrX_random 1446778 1446864 -7852142 - L1PA12 LINE L1 -295 5873 5789 1936 132 7 10 chrX_random 1447036 1447325 -7851681 + AluSx SINE Alu 7 294 -18 276 154 0 0 chrX_random 1447765 1447817 -7851189 + A-rich Low_complexity Low_complexity 1 52 0 351 113 0 0 chrX_random 1448430 1448492 -7850514 + L1PA15 LINE L1 6101 6162 -3 222 254 15 15 chrX_random 1449267 1449334 -7849672 + (TATG)n Simple_repeat Simple_repeat 4 70 0 2037 155 6 40 chrX_random 1449442 1449536 -7849470 + MLT1B LTR MaLR 1 97 -299 1614 88 19 0 chrX_random 1449536 1449751 -7849255 - AluSp SINE Alu -9 304 86 2037 155 6 40 chrX_random 1449751 1450062 -7848944 + MLT1B LTR MaLR 97 396 0 1319 161 13 0 chrX_random 1450062 1450292 -7848714 + MLT1B LTR MaLR 158 390 0 24 0 0 0 chrX_random 1450923 1450947 -7848059 + AT_rich Low_complexity Low_complexity 1 24 0 2818 216 40 10 chrX_random 1451190 1451863 -7847143 - L1MB4 LINE L1 -2 6178 5486 24 32 0 0 chrX_random 1451865 1451896 -7847110 + AT_rich Low_complexity Low_complexity 1 31 0 753 188 15 0 chrX_random 1451900 1452033 -7846973 - AluJo SINE Alu -177 135 1 2148 173 4 69 chrX_random 1452213 1452285 -7846721 - MSTC LTR MaLR -5 423 348 8828 25 0 0 chrX_random 1452285 1454094 -7844912 - L1PA2 LINE L1 -2 6153 4345 2148 173 4 69 chrX_random 1454094 1454418 -7844588 - MSTC LTR MaLR -80 348 57 2022 142 7 0 chrX_random 1454418 1454727 -7844279 - AluSx SINE Alu -1 311 1 2148 173 4 69 chrX_random 1454727 1454781 -7844225 - MSTC LTR MaLR -371 57 1 299 175 0 38 chrX_random 1454994 1455074 -7843932 - MLT2B1 LTR ERVL -3 517 441 1545 178 36 11 chrX_random 1455109 1455390 -7843616 + AluJb SINE Alu 1 288 -24 1595 187 15 0 chrX_random 1455451 1455724 -7843282 - MLT2B3 LTR ERVL -46 508 232 225 132 0 0 chrX_random 1455739 1455777 -7843229 + (GA)n Simple_repeat Simple_repeat 2 39 0 1127 204 9 0 chrX_random 1455798 1456009 -7842997 - MLT2D LTR ERVL -340 213 1 297 305 0 0 chrX_random 1456975 1457057 -7841949 + L2 LINE L2 2948 3029 -284 183 333 27 0 chrX_random 1457179 1457254 -7841752 + L2 LINE L2 3233 3309 -4 1230 182 0 5 chrX_random 1457359 1457579 -7841427 - Tigger3(Golem) DNA MER2_type -40 2989 2771 598 239 45 0 chrX_random 1457575 1457709 -7841297 - Tigger3(Golem) DNA MER2_type -2886 143 4 * 297 280 30 0 chrX_random 1458722 1458822 -7840184 + GA-rich Low_complexity Low_complexity 6 108 0 3119 122 2 0 chrX_random 1459027 1459510 -7839496 + L1MA2 LINE L1 5821 6304 0 285 109 0 0 chrX_random 1459612 1459658 -7839348 + (CA)n Simple_repeat Simple_repeat 2 47 0 1149 260 99 24 chrX_random 1460210 1460744 -7838262 + L1ME2 LINE L1 5581 6154 -10 1754 125 49 15 chrX_random 1461117 1461381 -7837625 - Charlie3 DNA MER1_type -2437 273 1 3955 148 20 18 chrX_random 1461384 1462093 -7836913 - L1PB4 LINE L1 -188 5968 5259 24 0 0 0 chrX_random 1462584 1462608 -7836398 + AT_rich Low_complexity Low_complexity 1 24 0 31 68 0 0 chrX_random 1462754 1462813 -7836193 + AT_rich Low_complexity Low_complexity 1 59 0 429 255 164 0 chrX_random 1462937 1463145 -7835861 - HAL1 LINE L1 -982 1525 1284 1944 166 0 0 chrX_random 1463176 1463471 -7835535 - AluJb SINE Alu -17 295 1 22 56 0 0 chrX_random 1463859 1463895 -7835111 + AT_rich Low_complexity Low_complexity 1 36 0 1646 176 3 65 chrX_random 1464170 1464493 -7834513 - AluJb SINE Alu -9 303 1 22 0 0 0 chrX_random 1465235 1465257 -7833749 + AT_rich Low_complexity Low_complexity 1 22 0 300 27 0 0 chrX_random 1465713 1465750 -7833256 + (TG)n Simple_repeat Simple_repeat 2 38 0 2028 161 9 0 chrX_random 1465750 1466098 -7832908 - L1PB3 LINE L1 -3 6151 5801 1008 234 6 23 chrX_random 1466104 1466457 -7832549 - LTR2 LTR ERV1 0 449 3 189 147 0 0 chrX_random 1466541 1466575 -7832431 + (CA)n Simple_repeat Simple_repeat 2 35 0 914 263 20 50 chrX_random 1466575 1466875 -7832131 + MLT1A2 LTR MaLR 34 324 -50 668 130 0 10 chrX_random 1466876 1466976 -7832030 + MER4A LTR ERV1 1 99 -565 1666 133 55 11 chrX_random 1466976 1467306 -7831700 + MER4A LTR ERV1 262 664 0 4597 107 1 1 chrX_random 1467887 1468549 -7830457 - L1PA11 LINE L1 0 6174 5513 264 30 0 0 chrX_random 1468658 1468691 -7830315 + (TG)n Simple_repeat Simple_repeat 2 34 0 252 0 0 0 chrX_random 1468759 1468787 -7830219 + (GA)n Simple_repeat Simple_repeat 1 28 0 25 83 0 0 chrX_random 1469700 1469760 -7829246 + AT_rich Low_complexity Low_complexity 1 60 0 3842 100 59 7 chrX_random 1471371 1471943 -7827063 - MER4B LTR ERV1 -1 609 8 295 156 44 28 chrX_random 1471944 1472224 -7826782 + (TA)n Simple_repeat Simple_repeat 1 284 0 291 130 38 60 chrX_random 1472290 1472474 -7826532 + (TA)n Simple_repeat Simple_repeat 1 180 0 25 51 0 0 chrX_random 1473113 1473152 -7825854 + AT_rich Low_complexity Low_complexity 1 39 0 2237 110 0 0 chrX_random 1473478 1473779 -7825227 + AluSg SINE Alu 1 301 -9 1811 181 0 3 chrX_random 1473788 1474092 -7824914 + AluJb SINE Alu 1 303 -9 486 139 13 0 chrX_random 1474383 1474462 -7824544 - MADE1 DNA Mariner 0 80 1 45 79 0 0 chrX_random 1474465 1474566 -7824440 + AT_rich Low_complexity Low_complexity 1 101 0 4027 184 27 27 chrX_random 1475123 1475201 -7823805 - MER6 DNA MER2_type -4 861 784 1660 164 65 7 chrX_random 1475201 1475494 -7823512 + AluJb SINE Alu 1 310 -2 4027 184 27 27 chrX_random 1475494 1476276 -7822730 - MER6 DNA MER2_type -80 785 1 2115 114 44 33 chrX_random 1476317 1476677 -7822329 + THE1B LTR MaLR 1 364 0 336 347 14 56 chrX_random 1476880 1477165 -7821841 - MLT1I LTR MaLR -80 329 57 213 217 22 0 chrX_random 1478276 1478322 -7820684 + (TG)n Simple_repeat Simple_repeat 2 48 0 1474 167 35 32 chrX_random 1479518 1479800 -7819206 + AluJo SINE Alu 1 283 -29 338 208 13 0 chrX_random 1480061 1480138 -7818868 + MLT1A1 LTR MaLR 287 364 -1 3221 130 43 6 chrX_random 1480757 1481242 -7817764 + MER1A DNA MER1_type 1 503 -26 380 191 12 0 chrX_random 1481383 1481467 -7817539 - MLT1D LTR MaLR -2 503 419 260 130 152 0 chrX_random 1481468 1481514 -7817492 + L1MA9 LINE L1 6099 6151 -161 423 38 0 0 chrX_random 1481514 1481567 -7817439 + (CA)n Simple_repeat Simple_repeat 1 53 0 231 196 43 0 chrX_random 1481567 1481613 -7817393 - MLT1D LTR MaLR -80 425 378 1222 172 82 26 chrX_random 1481626 1481738 -7817268 + L1MA9 LINE L1 5988 6092 -220 4064 114 7 3 chrX_random 1481738 1482336 -7816670 - LTR43 LTR ERV1 0 602 3 1222 172 82 26 chrX_random 1482336 1482386 -7816620 + L1MA9 LINE L1 6092 6138 -174 213 39 0 0 chrX_random 1482386 1482412 -7816594 + (CA)n Simple_repeat Simple_repeat 1 26 0 1222 172 82 26 chrX_random 1482412 1482515 -7816491 + L1MA9 LINE L1 6138 6269 -43 2081 174 49 29 chrX_random 1482516 1483042 -7815964 + MLT2A2 LTR ERVL 1 554 0 1777 195 11 3 chrX_random 1483283 1483642 -7815364 + MLT1A1 LTR MaLR 4 365 0 3132 165 44 42 chrX_random 1484287 1484505 -7814501 - LTR29 LTR ERV1 0 622 406 2181 138 33 25 chrX_random 1484505 1484866 -7814140 - THE1B LTR MaLR 0 364 1 3132 165 44 42 chrX_random 1484866 1485266 -7813740 - LTR29 LTR ERV1 -216 406 3 2144 112 26 0 chrX_random 1485372 1485677 -7813329 + AluSq SINE Alu 1 313 0 1651 166 48 45 chrX_random 1486633 1487007 -7811999 - THE1C LTR MaLR 0 375 1 745 141 7 0 chrX_random 1487371 1487506 -7811500 - L1MA7 LINE L1 0 6291 6156 252 265 0 0 chrX_random 1487686 1487735 -7811271 - MER5A DNA MER1_type -140 49 1 21 57 0 0 chrX_random 1488542 1488577 -7810429 + AT_rich Low_complexity Low_complexity 1 35 0 853 172 6 18 chrX_random 1488977 1489146 -7809860 - Tigger5 DNA MER2_type -84 2239 2073 744 311 42 18 chrX_random 1489408 1489742 -7809264 - LTR16C LTR ERVL -1 490 149 2229 119 0 0 chrX_random 1489796 1490106 -7808900 + AluSx SINE Alu 3 312 0 1315 185 105 25 chrX_random 1490188 1490464 -7808542 + AluJo SINE Alu 3 300 -12 567 161 33 33 chrX_random 1490464 1490644 -7808362 + GA-rich Low_complexity Low_complexity 1 180 0 243 179 0 0 chrX_random 1490647 1490686 -7808320 + polypurine Low_complexity Low_complexity 1 39 0 301 254 32 21 chrX_random 1490999 1491139 -7807867 + L1M3 LINE L1 5551 5694 -474 386 311 27 14 chrX_random 1491593 1491741 -7807265 - L2 LINE L2 -8 3305 3156 809 104 7 0 chrX_random 1491752 1491887 -7807119 + (TCTA)n Simple_repeat Simple_repeat 1 136 0 410 173 19 25 chrX_random 1491969 1492131 -7806875 + (TCTA)n Simple_repeat Simple_repeat 1 161 0 367 196 14 0 chrX_random 1492150 1492288 -7806718 + (TCTA)n Simple_repeat Simple_repeat 2 141 0 233 284 0 14 chrX_random 1492306 1492380 -7806626 + (TCTA)n Simple_repeat Simple_repeat 2 74 0 21 0 0 0 chrX_random 1493024 1493045 -7805961 + AT_rich Low_complexity Low_complexity 1 21 0 327 300 87 13 chrX_random 1494114 1494264 -7804742 + MIR SINE MIR 92 252 -10 2312 91 0 3 chrX_random 1494350 1494647 -7804359 + AluSc SINE Alu 1 296 -13 1806 143 25 3 chrX_random 1494655 1494941 -7804065 + AluSx SINE Alu 1 292 -20 183 100 0 0 chrX_random 1495248 1495278 -7803728 + (CA)n Simple_repeat Simple_repeat 2 31 0 2044 155 120 5 chrX_random 1495278 1495652 -7803354 + MSTA LTR MaLR 1 417 -11 300 275 36 54 chrX_random 1495688 1496077 -7802929 + L1M4 LINE L1 3059 3440 -2706 246 217 0 0 chrX_random 1496253 1496299 -7802707 - L2 LINE L2 -254 3059 3014 3015 179 20 9 chrX_random 1496366 1496913 -7802093 - MER41D LTR ERV1 -2 555 3 1846 103 43 0 chrX_random 1497476 1497757 -7801249 - L1MA2 LINE L1 0 6304 6012 1059 80 22 0 chrX_random 1497773 1497910 -7801096 - AluY SINE Alu -14 297 158 1191 41 0 0 chrX_random 1499088 1499234 -7799772 + L1PA5 LINE L1 5995 6140 -14 2339 103 0 3 chrX_random 1499931 1500241 -7798765 - AluSq SINE Alu -4 309 1 276 100 0 0 chrX_random 1500351 1500391 -7798615 + (TA)n Simple_repeat Simple_repeat 1 40 0 823 171 0 0 chrX_random 1501439 1501579 -7797427 + L1P5 LINE L1 5484 5623 -533 206 233 0 33 chrX_random 1502833 1502893 -7796113 - MIR SINE MIR -71 191 134 2095 137 0 3 chrX_random 1502939 1503245 -7795761 + AluSx SINE Alu 1 305 -7 285 200 93 0 chrX_random 1503661 1503736 -7795270 + MER89 LTR ERV1 3 84 -475 1470 231 31 6 chrX_random 1503783 1504134 -7794872 + MER89 LTR ERV1 200 559 0 1871 145 19 49 chrX_random 1504576 1504941 -7794065 - THE1C LTR MaLR -21 354 1 1360 212 61 7 chrX_random 1505173 1505466 -7793540 + AluJo SINE Alu 1 309 -3 305 354 95 18 chrX_random 1506066 1506402 -7792604 - L1M4 LINE L1 -2437 3709 3348 373 166 31 37 chrX_random 1507366 1507529 -7791477 + (TCTA)n Simple_repeat Simple_repeat 4 165 0 765 134 15 30 chrX_random 1507576 1507908 -7791098 + (TCTA)n Simple_repeat Simple_repeat 1 327 0 2584 139 83 122 chrX_random 1509090 1509678 -7789328 + LTR25 LTR ERV1 14 601 -193 2261 96 0 3 chrX_random 1509678 1509969 -7789037 + AluSg SINE Alu 1 290 -20 2584 139 83 122 chrX_random 1509969 1510156 -7788850 + LTR25 LTR ERV1 601 794 0 2866 98 48 18 chrX_random 1511350 1511790 -7787216 - MLT2A2 LTR ERVL 0 453 1 191 32 0 32 chrX_random 1512207 1512229 -7786777 + (GAAA)n Simple_repeat Simple_repeat 2 24 -7 2438 84 0 0 chrX_random 1512229 1512540 -7786466 + AluY SINE Alu 1 311 0 191 32 0 32 chrX_random 1512540 1512548 -7786458 + (GAAA)n Simple_repeat Simple_repeat 24 31 0 180 200 0 0 chrX_random 1513291 1513336 -7785670 + (CA)n Simple_repeat Simple_repeat 2 46 0 29 28 0 0 chrX_random 1513767 1513803 -7785203 + AT_rich Low_complexity Low_complexity 1 36 0 917 132 15 88 chrX_random 1515008 1515213 -7783793 + L1MA7 LINE L1 5844 6033 -258 1197 183 40 15 chrX_random 1515504 1515777 -7783229 + L1MA7 LINE L1 6010 6289 -2 1559 147 60 4 chrX_random 1515850 1516101 -7782905 + AluSq SINE Alu 1 265 -48 202 266 223 11 chrX_random 1516567 1516661 -7782345 + MIR SINE MIR 132 245 -17 2224 79 4 0 chrX_random 1519044 1519322 -7779684 + AluSx SINE Alu 19 297 -15 189 94 0 0 chrX_random 1519330 1519362 -7779644 + (CCAA)n Simple_repeat Simple_repeat 2 33 0 272 262 179 29 chrX_random 1519362 1519702 -7779304 - L1ME LINE L1 -464 5706 5328 649 244 0 0 chrX_random 1519949 1520068 -7778938 + FLAM_A SINE Alu 1 119 -14 23 33 0 0 chrX_random 1520068 1520098 -7778908 + AT_rich Low_complexity Low_complexity 1 30 0 495 264 25 30 chrX_random 1520101 1520298 -7778708 + MER3 DNA MER1_type 4 199 -10 639 131 0 10 chrX_random 1520568 1520667 -7778339 + MER4A LTR ERV1 1 98 -566 1774 140 6 35 chrX_random 1520667 1521023 -7777983 + MER4A LTR ERV1 261 664 0 282 392 50 14 chrX_random 1522004 1522226 -7776780 - MLT1K LTR MaLR -278 310 81 2450 150 39 5 chrX_random 1522553 1522967 -7776039 - MSTA LTR MaLR 0 428 1 260 258 199 34 chrX_random 1523210 1523477 -7775529 - L1ME LINE L1 -511 5651 5341 2078 118 7 0 chrX_random 1523738 1524026 -7774980 - AluSx SINE Alu -2 310 21 22 35 0 0 chrX_random 1524528 1524557 -7774449 + AT_rich Low_complexity Low_complexity 1 29 0 323 102 95 15 chrX_random 1524570 1524707 -7774299 + (TCTA)n Simple_repeat Simple_repeat 3 150 0 27 29 0 0 chrX_random 1525533 1525567 -7773439 + AT_rich Low_complexity Low_complexity 1 34 0 2198 120 3 0 chrX_random 1526301 1526600 -7772406 - AluSx SINE Alu -12 300 1 854 217 56 20 chrX_random 1526679 1526877 -7772129 - MER20 DNA MER1_type -5 214 10 351 185 28 93 chrX_random 1526909 1526956 -7772050 - MER49 LTR ERV1 0 923 875 2229 128 0 0 chrX_random 1526956 1527268 -7771738 - AluSx SINE Alu 0 312 1 351 185 28 93 chrX_random 1527268 1527328 -7771678 - MER49 LTR ERV1 -48 875 823 782 183 6 0 chrX_random 1529336 1529670 -7769336 + (ATG)n Simple_repeat Simple_repeat 1 336 0 1268 110 0 0 chrX_random 1529849 1530022 -7768984 + AluSq SINE Alu 140 312 -1 24 0 0 0 chrX_random 1531283 1531307 -7767699 + AT_rich Low_complexity Low_complexity 1 24 0 43 47 0 0 chrX_random 1531322 1531386 -7767620 + AT_rich Low_complexity Low_complexity 1 64 0 197 298 40 73 chrX_random 1531830 1531954 -7767052 - MIR SINE MIR 0 262 143 1610 177 3 17 chrX_random 1531988 1532282 -7766724 + AluJo SINE Alu 1 290 -22 24 0 0 0 chrX_random 1532293 1532317 -7766689 + AT_rich Low_complexity Low_complexity 1 24 0 833 255 145 58 chrX_random 1532339 1532877 -7766129 - MER34C LTR ERV1 0 585 1 455 214 17 34 chrX_random 1533200 1533378 -7765628 + (TCTA)n Simple_repeat Simple_repeat 1 175 0 368 288 72 46 chrX_random 1533465 1533772 -7765234 - L1ME2 LINE L1 -1 6163 5844 2068 132 0 13 chrX_random 1533772 1534076 -7764930 - AluSx SINE Alu -12 300 1 368 288 72 46 chrX_random 1534076 1534214 -7764792 - L1ME2 LINE L1 -320 5844 5711 2132 204 49 20 chrX_random 1534500 1534950 -7764056 - MLT1D LTR MaLR 0 505 69 2123 125 53 14 chrX_random 1534950 1535311 -7763695 - THE1C LTR MaLR 0 375 1 2132 204 49 20 chrX_random 1535311 1535323 -7763683 - MLT1D LTR MaLR -436 69 59 216 67 0 0 chrX_random 1535323 1535353 -7763653 + (TTTTG)n Simple_repeat Simple_repeat 1 30 0 2132 204 49 20 chrX_random 1535353 1535380 -7763626 - MLT1D LTR MaLR -446 59 1 499 123 41 0 chrX_random 1535568 1535690 -7763316 + (TA)n Simple_repeat Simple_repeat 2 128 0 1884 165 3 0 chrX_random 1535690 1535981 -7763025 - AluJb SINE Alu -20 292 1 396 0 0 0 chrX_random 1536493 1536537 -7762469 + (TAGA)n Simple_repeat Simple_repeat 3 46 0 948 179 0 0 chrX_random 1537620 1537916 -7761090 + (TGGA)n Simple_repeat Simple_repeat 1 296 0 257 250 22 43 chrX_random 1538677 1538769 -7760237 + L1ME LINE L1 5798 5887 -283 2478 153 24 5 chrX_random 1538830 1539248 -7759758 - MSTB LTR MaLR 0 426 1 27 81 0 0 chrX_random 1539278 1539340 -7759666 + AT_rich Low_complexity Low_complexity 1 62 0 982 195 5 15 chrX_random 1539459 1539906 -7759100 + (TGGA)n Simple_repeat Simple_repeat 1 442 0 1523 254 160 78 chrX_random 1540884 1541446 -7757560 + MLT1E3 LTR MaLR 39 616 -8 23 54 0 0 chrX_random 1541694 1541731 -7757275 + AT_rich Low_complexity Low_complexity 1 37 0 3422 101 4 0 chrX_random 1543332 1543816 -7755190 + L1PA13 LINE L1 5659 6144 -19 21 0 0 0 chrX_random 1543820 1543841 -7755165 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chrX_random 1545121 1545152 -7753854 + AT_rich Low_complexity Low_complexity 1 31 0 197 328 31 0 chrX_random 1545243 1545307 -7753699 - L2 LINE L2 -2 3270 3205 1304 249 16 26 chrX_random 1545713 1546091 -7752915 - MLT1A2 LTR MaLR 0 374 1 975 115 0 0 chrX_random 1546203 1546351 -7752655 + (TA)n Simple_repeat Simple_repeat 1 148 0 2142 173 39 14 chrX_random 1546525 1546959 -7752047 - MER65A LTR ERV1 0 445 1 5646 177 21 8 chrX_random 1547449 1549446 -7749560 - L1MA5 LINE L1 0 6300 4277 1363 132 0 0 chrX_random 1549449 1549653 -7749353 - AluSg/x SINE Alu -4 306 103 1030 195 11 46 chrX_random 1549664 1549926 -7749080 - L1MA5 LINE L1 -1871 4275 4023 419 52 17 0 chrX_random 1550195 1550253 -7748753 + (GAAA)n Simple_repeat Simple_repeat 2 60 0 2126 183 11 3 chrX_random 1550283 1550665 -7748341 + MLT1B LTR MaLR 1 385 -5 3348 235 25 43 chrX_random 1551104 1552024 -7746982 - L1MD1 LINE L1 -1 6241 5337 2304 108 0 3 chrX_random 1552024 1552338 -7746668 - AluSq SINE Alu 0 313 1 3348 235 25 43 chrX_random 1552338 1552486 -7746520 - L1MD1 LINE L1 -905 5337 5188 23 68 0 0 chrX_random 1553061 1553105 -7745901 + AT_rich Low_complexity Low_complexity 1 44 0 2112 128 30 44 chrX_random 1554669 1555036 -7743970 + THE1B LTR MaLR 1 362 -2 2026 162 7 74 chrX_random 1555231 1555641 -7743365 - L1MA9 LINE L1 -3 6309 5932 2762 79 22 3 chrX_random 1555641 1556008 -7742998 - THE1C LTR MaLR -1 374 1 2026 162 7 74 chrX_random 1556008 1556059 -7742947 - L1MA9 LINE L1 -380 5932 5879 2274 108 135 8 chrX_random 1556069 1556447 -7742559 + MSTA LTR MaLR 1 426 -2 184 150 70 10 chrX_random 1557158 1557258 -7741748 + (TA)n Simple_repeat Simple_repeat 1 106 0 24 32 0 0 chrX_random 1557292 1557323 -7741683 + AT_rich Low_complexity Low_complexity 1 31 0 318 240 227 60 chrX_random 1558638 1558788 -7740218 + MER20 DNA MER1_type 45 219 0 2040 175 65 24 chrX_random 1559090 1559307 -7739699 - MSTB1 LTR MaLR 0 432 225 1701 194 3 0 chrX_random 1559307 1559601 -7739405 - AluJb SINE Alu -16 296 2 2040 175 65 24 chrX_random 1559601 1559795 -7739211 - MSTB1 LTR MaLR -207 225 4 23 86 0 0 chrX_random 1560673 1560731 -7738275 + AT_rich Low_complexity Low_complexity 1 58 0 1225 186 5 0 chrX_random 1560922 1561142 -7737864 - AluJb SINE Alu -91 221 1 1812 196 17 3 chrX_random 1561230 1561588 -7737418 + MLT1A1 LTR MaLR 1 363 -2 585 219 0 6 chrX_random 1561906 1562250 -7736756 + CT-rich Low_complexity Low_complexity 1 341 0 450 0 0 0 chrX_random 1562406 1562456 -7736550 + (TTTA)n Simple_repeat Simple_repeat 3 52 0 347 48 0 0 chrX_random 1562456 1562498 -7736508 - L1PA6 LINE L1 -16 6138 6097 21 0 0 0 chrX_random 1563087 1563108 -7735898 + AT_rich Low_complexity Low_complexity 1 21 0 1247 163 9 27 chrX_random 1563278 1563499 -7735507 - AluJo SINE Alu -5 307 91 1204 138 102 18 chrX_random 1565304 1565529 -7733477 - MSTA LTR MaLR 0 428 185 248 294 46 46 chrX_random 1565712 1565821 -7733185 + MLT1L LTR MaLR 98 206 -409 * 672 332 114 16 chrX_random 1565805 1566181 -7732825 + MLT1K LTR MaLR 137 549 -39 889 105 70 58 chrX_random 1566185 1566356 -7732650 - MSTA LTR MaLR -255 173 1 222 37 0 0 chrX_random 1568019 1568046 -7730960 + (TTTC)n Simple_repeat Simple_repeat 4 30 0 1385 174 0 82 chrX_random 1568046 1568340 -7730666 - AluJo SINE Alu -42 270 1 206 329 56 77 chrX_random 1568493 1568636 -7730370 + MER5A DNA MER1_type 7 146 -43 1072 161 6 0 chrX_random 1569249 1569411 -7729595 + AluJb SINE Alu 127 289 -23 389 294 7 7 chrX_random 1570506 1570659 -7728347 + (TA)n Simple_repeat Simple_repeat 1 153 0 28 0 0 0 chrX_random 1570672 1570700 -7728306 + AT_rich Low_complexity Low_complexity 1 28 0 263 229 42 14 chrX_random 1570735 1570879 -7728127 + (TA)n Simple_repeat Simple_repeat 2 149 0 200 176 39 0 chrX_random 1571073 1571124 -7727882 + T-rich Low_complexity Low_complexity 2 54 0 695 211 20 4 chrX_random 1571798 1572438 -7726568 + GA-rich Low_complexity Low_complexity 1 649 0 246 153 0 0 chrX_random 1572438 1572497 -7726509 + (CAGG)n Simple_repeat Simple_repeat 2 60 0 2414 65 0 3 chrX_random 1572806 1573113 -7725893 - AluY SINE Alu -5 306 1 1460 128 4 4 chrX_random 1573940 1574167 -7724839 - L1PB3 LINE L1 -1 6153 5927 2850 0 0 0 chrX_random 1574447 1574751 -7724255 + AluYa5 SINE Alu 1 304 -7 231 61 0 0 chrX_random 1574829 1574862 -7724144 + (CA)n Simple_repeat Simple_repeat 2 34 0 27 0 0 0 chrX_random 1574969 1574996 -7724010 + AT_rich Low_complexity Low_complexity 1 27 0 512 168 15 22 chrX_random 1575109 1575246 -7723760 + GA-rich Low_complexity Low_complexity 2 137 0 278 26 26 0 chrX_random 1575471 1575510 -7723496 + (TCTA)n Simple_repeat Simple_repeat 2 41 0 227 206 29 59 chrX_random 1575837 1575905 -7723101 + MER34 LTR ERV1 97 162 -380 40 59 0 0 chrX_random 1578420 1578488 -7720518 + AT_rich Low_complexity Low_complexity 1 68 0 212 171 0 0 chrX_random 1578751 1578792 -7720214 + (TA)n Simple_repeat Simple_repeat 2 42 0 1500 203 27 14 chrX_random 1579727 1580022 -7718984 - AluJb SINE Alu -13 299 1 226 152 0 30 chrX_random 1580712 1580778 -7718228 + (TA)n Simple_repeat Simple_repeat 2 65 0 873 244 4 27 chrX_random 1582872 1583093 -7715913 + L1ME LINE L1 34 596 -5934 354 300 67 28 chrX_random 1583074 1583254 -7715752 + L1ME LINE L1 374 560 -5980 * 1212 269 17 38 chrX_random 1583257 1583735 -7715271 + MLT2B1 LTR ERVL 1 469 -85 857 237 16 63 chrX_random 1583733 1584137 -7714869 + MLT2B1 LTR ERVL 267 514 -6 * 331 189 0 0 chrX_random 1584143 1584196 -7714810 + L1ME LINE L1 645 697 -5843 424 320 39 1 chrX_random 1584300 1584482 -7714524 + L1ME LINE L1 592 1087 -5453 2922 236 128 21 chrX_random 1584492 1585697 -7713309 + L1ME LINE L1 1202 2535 -4005 900 250 30 0 chrX_random 1585713 1585949 -7713057 + L1MD2 LINE L1 5707 5949 -410 1649 168 14 28 chrX_random 1586095 1586411 -7712595 + AluJb SINE Alu 1 312 0 29 28 0 0 chrX_random 1586558 1586594 -7712412 + AT_rich Low_complexity Low_complexity 1 36 0 324 320 41 35 chrX_random 1586991 1587163 -7711843 + L1ME3A LINE L1 5769 5941 -229 2629 115 0 0 chrX_random 1587312 1587676 -7711330 - THE1B LTR MaLR 0 364 1 1802 184 16 16 chrX_random 1588118 1588483 -7710523 - MLT1A1 LTR MaLR 0 365 1 31 0 0 0 chrX_random 1588835 1588866 -7710140 + AT_rich Low_complexity Low_complexity 1 31 0 1196 136 82 0 chrX_random 1589148 1589368 -7709638 - L1PA13 LINE L1 -4 6159 5922 1547 183 10 7 chrX_random 1590588 1590878 -7708128 + AluJo SINE Alu 7 297 -15 321 272 46 27 chrX_random 1591268 1591468 -7707538 + L1ME3 LINE L1 5683 5886 -276 38 0 0 0 chrX_random 1591559 1591597 -7707409 + AT_rich Low_complexity Low_complexity 1 38 0 339 251 87 5 chrX_random 1591749 1591956 -7707050 + L1M4 LINE L1 4427 4650 -1496 2173 64 22 0 chrX_random 1592219 1592486 -7706520 - AluY SINE Alu -1 310 38 3238 100 29 4 chrX_random 1592493 1592981 -7706025 - L1PA11 LINE L1 -2 6172 5673 1178 262 55 49 chrX_random 1593122 1593488 -7705518 - MLT1E LTR MaLR -19 574 207 1201 198 109 39 chrX_random 1593542 1593880 -7705126 - MLT1A2 LTR MaLR 0 374 13 536 189 57 0 chrX_random 1593976 1594082 -7704924 - MLT1E LTR MaLR -481 112 1 608 153 47 12 chrX_random 1594110 1594464 -7704542 + (TCTA)n Simple_repeat Simple_repeat 1 366 0 2719 157 52 31 chrX_random 1594880 1595325 -7703681 - MER1A DNA MER1_type -2174 526 92 271 0 51 0 chrX_random 1595325 1595364 -7703642 + (TTTTG)n Simple_repeat Simple_repeat 1 41 0 1982 147 0 0 chrX_random 1595366 1595645 -7703361 - AluSx SINE Alu -33 279 1 2719 157 52 31 chrX_random 1595645 1595711 -7703295 - MER1A DNA MER1_type -2608 92 1 1389 244 94 37 chrX_random 1597367 1597802 -7701204 + MLT1C LTR MaLR 1 460 -7 309 265 36 12 chrX_random 1598407 1598490 -7700516 - L2 LINE L2 -47 3266 3182 677 162 54 0 chrX_random 1598510 1598686 -7700320 + L1PB1 LINE L1 5910 6145 -6 381 322 83 22 chrX_random 1598815 1598995 -7700011 + MER91A DNA MER1_type 2 192 -4 2046 127 3 0 chrX_random 1599200 1599492 -7699514 - AluSx SINE Alu -19 293 1 1667 173 10 16 chrX_random 1600165 1600500 -7698506 - AluJb SINE Alu 0 333 1 255 61 0 0 chrX_random 1600735 1600768 -7698238 + (T)n Simple_repeat Simple_repeat 1 33 0 2106 132 3 0 chrX_random 1601955 1602250 -7696756 - AluSx SINE Alu -16 296 1 21 0 0 0 chrX_random 1602351 1602372 -7696634 + AT_rich Low_complexity Low_complexity 1 21 0 22 56 0 0 chrX_random 1602760 1602796 -7696210 + AT_rich Low_complexity Low_complexity 1 36 0 223 182 30 30 chrX_random 1603170 1603269 -7695737 + GA-rich Low_complexity Low_complexity 2 100 0 4114 50 0 0 chrX_random 1603355 1603858 -7695148 - L1PA5 LINE L1 -9 6145 5643 240 204 0 0 chrX_random 1604159 1604203 -7694803 - L2 LINE L2 -5 3308 3265 40 49 0 0 chrX_random 1604397 1604458 -7694548 + AT_rich Low_complexity Low_complexity 1 61 0 1964 125 0 28 chrX_random 1604512 1604827 -7694179 + AluSg SINE Alu 6 310 0 21 57 0 0 chrX_random 1604855 1604890 -7694116 + AT_rich Low_complexity Low_complexity 1 35 0 433 161 100 39 chrX_random 1606096 1606226 -7692780 + ORSL DNA AcHobo 48 185 -90 26 0 0 0 chrX_random 1606226 1606252 -7692754 + AT_rich Low_complexity Low_complexity 1 26 0 217 333 0 0 chrX_random 1606310 1606370 -7692636 + MER5A DNA MER1_type 110 169 -20 1392 99 0 0 chrX_random 1607183 1607374 -7691632 - L1PA14 LINE L1 -9 6152 5962 996 162 34 0 chrX_random 1607374 1607553 -7691453 - L1P LINE L1 -1107 5039 4855 1389 146 0 5 chrX_random 1608105 1608317 -7690689 + AluSg SINE Alu 1 211 -99 1444 180 9 91 chrX_random 1608378 1608717 -7690289 - AluJb SINE Alu -1 311 1 1891 154 41 0 chrX_random 1610260 1610552 -7688454 + AluJb SINE Alu 1 304 -8 3086 166 57 5 chrX_random 1610914 1611530 -7687476 - MER4D LTR ERV1 0 866 260 2144 158 46 35 chrX_random 1611586 1612126 -7686880 - MLT2A2 LTR ERVL 0 554 1 518 122 0 0 chrX_random 1612185 1612259 -7686747 - MER4D LTR ERV1 -680 223 150 2822 211 53 75 chrX_random 1812262 1813061 -7485945 - L1P3 LINE L1 -5671 790 10 2363 71 7 0 chrX_random 1813145 1813440 -7485566 + AluY SINE Alu 1 297 -14 2017 168 9 0 chrX_random 1813731 1814064 -7484942 - L1PA16 LINE L1 -62 6104 5769 16459 28 1 1 chrX_random 1814088 1816689 -7482317 - L1PA3 LINE L1 -3 6152 3553 337 234 0 0 chrX_random 1816729 1816793 -7482213 + MER2 DNA MER2_type 280 343 -2 2384 71 3 7 chrX_random 1816876 1817172 -7481834 + AluSx SINE Alu 1 295 -17 265 236 28 14 chrX_random 1817397 1817469 -7481537 + L2 LINE L2 3240 3312 -1 1024 158 6 0 chrX_random 1817943 1818101 -7480905 + FRAM SINE Alu 1 158 -18 21 0 0 0 chrX_random 1818221 1818242 -7480764 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chrX_random 1818251 1818272 -7480734 + AT_rich Low_complexity Low_complexity 1 21 0 913 39 5 3 chrX_random 1818289 1818316 -7480690 + L1PA4 LINE L1 5769 5794 -360 2007 38 0 34 chrX_random 1818316 1818581 -7480425 - L1PA5 LINE L1 -18 6136 5881 913 39 5 3 chrX_random 1818581 1818685 -7480321 + L1PA5 LINE L1 5794 5901 -253 2136 205 36 71 chrX_random 1819090 1819720 -7479286 + L1ME3A LINE L1 5562 6169 -1 261 0 0 0 chrX_random 1820421 1820450 -7478556 + (T)n Simple_repeat Simple_repeat 1 29 0 379 312 21 0 chrX_random 1820717 1820810 -7478196 + MER5A DNA MER1_type 11 105 -84 2320 115 0 0 chrX_random 1821118 1821430 -7477576 + AluSx SINE Alu 1 312 0 680 243 56 70 chrX_random 1821631 1821915 -7477091 + MLT1J LTR MaLR 1 280 -231 757 301 176 7 chrX_random 1821996 1822422 -7476584 + HAL1 LINE L1 237 734 -1773 2418 279 85 22 chrX_random 1822437 1823493 -7475513 + HAL1 LINE L1 786 1908 -599 180 0 0 0 chrX_random 1824141 1824161 -7474845 + (TAA)n Simple_repeat Simple_repeat 2 21 0 975 125 6 81 chrX_random 1824270 1824485 -7474521 + MLT1C LTR MaLR 4 195 -195 1023 141 5 50 chrX_random 1824626 1824825 -7474181 + MSTD LTR MaLR 1 190 -206 564 144 44 0 chrX_random 1824821 1824911 -7474095 + MSTD LTR MaLR 303 396 0 * 693 267 135 17 chrX_random 1825887 1826124 -7472882 - MLT1J1 LTR MaLR -2 444 236 180 0 0 0 chrX_random 1826124 1826144 -7472862 + (GA)n Simple_repeat Simple_repeat 2 21 0 693 267 135 17 chrX_random 1826144 1826165 -7472841 - MLT1J1 LTR MaLR -210 236 219 2374 104 64 14 chrX_random 1826165 1826522 -7472484 + THE1C LTR MaLR 1 375 0 693 267 135 17 chrX_random 1826522 1826618 -7472388 - MLT1J1 LTR MaLR -227 219 47 1306 256 78 58 chrX_random 1826829 1827367 -7471639 - MLT1H LTR MaLR 0 549 1 1868 224 120 13 chrX_random 1827735 1828203 -7470803 + MLT2B1 LTR ERVL 1 518 -2 494 259 15 15 chrX_random 1828920 1829055 -7469951 - MIR SINE MIR -116 146 12 1307 270 63 10 chrX_random 1829788 1830203 -7468803 + LTR16A LTR ERVL 14 450 0 367 337 95 16 chrX_random 1830401 1830644 -7468362 - MLT2E LTR ERVL -11 617 356 418 278 35 17 chrX_random 1830717 1830832 -7468174 - MLT2E LTR ERVL -500 128 12 250 204 0 0 chrX_random 1831714 1831758 -7467248 + MER5A DNA MER1_type 1 44 -145 729 291 136 24 chrX_random 1832398 1832773 -7466233 + LTR16C LTR ERVL 73 489 -2 343 333 18 9 chrX_random 1832843 1832957 -7466049 - L2 LINE L2 -17 3296 3182 191 364 36 0 chrX_random 1834512 1834622 -7464384 + L2 LINE L2 676 789 -2525 2008 101 10 20 chrX_random 1834798 1835094 -7463912 - AluSc SINE Alu -16 293 1 269 266 51 13 chrX_random 1835840 1835919 -7463087 + MIR SINE MIR 48 129 -133 241 184 0 0 chrX_random 1836002 1836051 -7462955 - L2 LINE L2 -1 3312 3264 1464 259 69 42 chrX_random 1837981 1838459 -7460547 - LTR16C LTR ERVL 0 491 1 693 262 11 16 chrX_random 1838839 1839026 -7459980 - MIR SINE MIR 0 262 77 2237 96 45 24 chrX_random 1839583 1839915 -7459091 - THE1C LTR MaLR 0 375 37 8391 108 21 84 chrX_random 1839915 1840764 -7458242 - THE1C-int LTR MaLR -238 1342 619 242 0 61 0 chrX_random 1840764 1840797 -7458209 + (TTTG)n Simple_repeat Simple_repeat 2 36 0 8391 108 21 84 chrX_random 1840797 1841380 -7457626 - THE1C-int LTR MaLR -961 619 1 2899 101 3 8 chrX_random 1841380 1841757 -7457249 - THE1C LTR MaLR 0 375 1 1481 278 58 8 chrX_random 1842204 1842690 -7456316 + L1MC4 LINE L1 6702 7211 -831 1631 219 57 0 chrX_random 1842802 1843171 -7455835 + L1P LINE L1 4060 4449 -1697 3897 119 13 6 chrX_random 1843180 1843971 -7455035 - L1P4 LINE L1 -632 5536 4743 3362 83 14 7 chrX_random 1843971 1844404 -7454602 + L1PA12 LINE L1 5732 6168 0 5027 132 0 20 chrX_random 1844433 1845192 -7453814 + L1PA15 LINE L1 5422 6165 0 874 244 37 53 chrX_random 1845239 1845538 -7453468 + MER20B DNA MER1_type 253 546 -237 2241 145 74 57 chrX_random 1845647 1846122 -7452884 - L1MC1 LINE L1 -11 6322 5840 761 179 82 11 chrX_random 1846162 1846346 -7452660 + MER20B DNA MER1_type 547 743 -40 3310 165 3 51 chrX_random 1846346 1846969 -7452037 + L1MB2 LINE L1 5572 6164 -7 621 260 119 39 chrX_random 1848587 1849009 -7449997 - MLT1H LTR MaLR 0 549 21 405 285 46 46 chrX_random 1849786 1849937 -7449069 + MIR3 SINE MIR 20 170 -38 463 258 111 16 chrX_random 1850849 1851039 -7447967 + L1MEc LINE L1 1627 1834 -4562 226 259 103 0 chrX_random 1851356 1851472 -7447534 + L1ME4a LINE L1 5991 6118 -3 23 33 0 0 chrX_random 1851796 1851826 -7447180 + AT_rich Low_complexity Low_complexity 1 30 0 704 196 7 7 chrX_random 1851943 1852086 -7446920 - MLT1A1 LTR MaLR 0 365 223 * 1804 110 0 4 chrX_random 1852081 1852327 -7446679 + THE1B LTR MaLR 118 362 -2 12333 86 0 0 chrX_random 1852329 1853889 -7445117 - HERVL-A2 LTR ERVL -1944 3710 2151 * 14573 101 3 4 chrX_random 1853880 1855833 -7443173 - HERVL-A2 LTR ERVL -3704 1950 1 2067 181 34 31 chrX_random 1855833 1856380 -7442626 - MLT2A2 LTR ERVL 0 554 4 1651 92 0 35 chrX_random 1856380 1856608 -7442398 + L1PA11 LINE L1 5955 6174 0 1877 188 42 0 chrX_random 1856809 1857139 -7441867 + MER2 DNA MER2_type 1 344 0 477 257 59 29 chrX_random 1857551 1857687 -7441319 + MIR SINE MIR 47 186 -76 602 218 112 34 chrX_random 1859311 1859539 -7439467 + MLT1J2 LTR MaLR 18 262 -184 313 198 156 10 chrX_random 1859559 1859655 -7439351 + MLT1J1 LTR MaLR 337 446 0 1229 167 43 0 chrX_random 1859697 1859907 -7439099 + MER20 DNA MER1_type 1 219 0 24 32 0 0 chrX_random 1860000 1860031 -7438975 + AT_rich Low_complexity Low_complexity 1 31 0 388 310 9 17 chrX_random 1860442 1860558 -7438448 + L2 LINE L2 3197 3311 -2 250 219 53 88 chrX_random 1860638 1860752 -7438254 - Charlie8 DNA MER1_type -2258 159 50 428 270 35 58 chrX_random 1860855 1860884 -7438122 - MIR SINE MIR -15 247 219 1364 260 129 8 chrX_random 1860884 1861372 -7437634 - MLT1H LTR MaLR 0 549 3 428 270 35 58 chrX_random 1861372 1861436 -7437570 - MIR SINE MIR -43 219 155 1580 177 44 49 chrX_random 1861436 1861507 -7437499 - MLT1A1 LTR MaLR 0 365 295 2128 122 16 0 chrX_random 1861507 1861811 -7437195 + AluSc SINE Alu 1 309 0 1580 177 44 49 chrX_random 1861811 1862106 -7436900 - MLT1A1 LTR MaLR -70 295 1 428 270 35 58 chrX_random 1862106 1862185 -7436821 - MIR SINE MIR -107 155 78 1832 153 49 27 chrX_random 1862386 1862753 -7436253 - THE1C LTR MaLR 0 375 1 9117 126 41 41 chrX_random 1862753 1864330 -7434676 - THE1C-int LTR MaLR 0 1580 4 254 116 23 23 chrX_random 1864333 1864376 -7434630 - THE1C LTR MaLR 0 355 313 4694 135 0 62 chrX_random 1864376 1865168 -7433838 - L1P LINE L1 -1373 4773 4031 6867 34 4 0 chrX_random 1865169 1866000 -7433006 + L1PA4 LINE L1 5320 6153 -2 1668 156 41 38 chrX_random 1866005 1866344 -7432662 - THE1C LTR MaLR -35 340 1 998 185 23 0 chrX_random 1867374 1867547 -7431459 + MER5B DNA MER1_type 1 177 -1 22 0 0 0 chrX_random 1868517 1868539 -7430467 + AT_rich Low_complexity Low_complexity 1 22 0 598 255 52 21 chrX_random 1868845 1869037 -7429969 - HAL1 LINE L1 -2286 221 24 237 308 85 24 chrX_random 1869099 1869346 -7429660 - L1MEc LINE L1 -4587 1723 1462 1030 272 100 73 chrX_random 1869450 1870078 -7428928 - L1MEc LINE L1 -5122 997 353 395 276 65 24 chrX_random 1870127 1870297 -7428709 - L1MEc LINE L1 -5903 216 40 1653 209 24 95 chrX_random 1870470 1871059 -7427947 + L1MC4 LINE L1 7496 8042 0 370 29 43 29 chrX_random 1871975 1872045 -7426961 + (TTATA)n Simple_repeat Simple_repeat 5 75 0 15764 155 28 7 chrX_random 1872304 1876632 -7422374 - L1MA3 LINE L1 0 7724 3486 183 80 0 0 chrX_random 1876632 1876657 -7422349 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 15764 155 28 7 chrX_random 1876657 1877018 -7421988 - L1MA3 LINE L1 -4238 3486 3134 2180 126 0 0 chrX_random 1877018 1877319 -7421687 - AluSx SINE Alu -11 301 1 15764 155 28 7 chrX_random 1877319 1877624 -7421382 - L1MA3 LINE L1 -4590 3134 2622 1425 253 55 68 chrX_random 1877624 1878244 -7420762 - LTR9 LTR ERV1 0 612 1 7209 188 3 1 chrX_random 1878247 1879457 -7419549 - L1M1 LINE L1 -5974 1591 379 * 20996 52 29 12 chrX_random 1879456 1882342 -7416664 + L1P LINE L1 2470 5403 -743 219 381 114 0 chrX_random 1882789 1882965 -7416041 + L2 LINE L2 2866 3061 -211 4564 168 35 8 chrX_random 1883309 1884180 -7414826 - L1MB8 LINE L1 -60 6118 5224 1258 34 11 17 chrX_random 1884349 1884377 -7414629 + (GAA)n Simple_repeat Simple_repeat 1 205 0 1258 34 11 17 chrX_random 1884377 1884556 -7414450 + (GAA)n Simple_repeat Simple_repeat 3 180 0 357 24 0 0 chrX_random 1884780 1884822 -7414184 + (CA)n Simple_repeat Simple_repeat 1 42 0 1649 193 24 3 chrX_random 1885863 1886200 -7412806 - L1MD3 LINE L1 0 7995 7652 * 7073 37 0 0 chrX_random 1886196 1887038 -7411968 - L1PA4 LINE L1 -1 6154 5313 1466 184 19 0 chrX_random 1887038 1887309 -7411697 - L1MC4 LINE L1 -481 7561 7286 22 35 0 0 chrX_random 1887742 1887771 -7411235 + AT_rich Low_complexity Low_complexity 1 29 0 346 383 35 0 chrX_random 1888560 1888701 -7410305 + L2 LINE L2 3124 3269 -3 258 311 83 23 chrX_random 1889047 1889179 -7409827 + L2 LINE L2 3173 3312 -1 24 32 0 0 chrX_random 1889502 1889533 -7409473 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chrX_random 1889683 1889706 -7409300 + AT_rich Low_complexity Low_complexity 1 23 0 221 306 28 28 chrX_random 1889956 1890064 -7408942 - L3b LINE CR1 -178 1405 1298 2031 226 105 15 chrX_random 1891313 1891793 -7407213 + L1MC4 LINE L1 7381 7929 -113 357 24 0 0 chrX_random 1891793 1891835 -7407171 + (TCTA)n Simple_repeat Simple_repeat 1 42 0 2031 226 105 15 chrX_random 1891835 1891961 -7407045 + L1MC4 LINE L1 7929 8042 0 410 310 99 12 chrX_random 1892434 1892605 -7406401 + MER20B DNA MER1_type 46 231 -552 3913 92 14 54 chrX_random 1892608 1893327 -7405679 + L1PB1 LINE L1 5460 6149 -2 246 270 34 51 chrX_random 1893467 1893645 -7405361 + HAL1 LINE L1 2333 2507 0 429 20 0 0 chrX_random 1893702 1893752 -7405254 + (TC)n Simple_repeat Simple_repeat 2 51 0 1173 305 29 22 chrX_random 1894713 1895201 -7403805 + LTR16C LTR ERVL 1 491 0 214 229 114 86 chrX_random 1896301 1896406 -7402600 - L2 LINE L2 -9 3304 3197 * 548 234 181 10 chrX_random 1896397 1896602 -7402404 - MIR SINE MIR -22 240 1 434 333 113 50 chrX_random 1896738 1897162 -7401844 - L2 LINE L2 -2 3270 2820 398 262 49 0 chrX_random 1897166 1897288 -7401718 + MER94 DNA DNA 7 134 0 573 320 35 73 chrX_random 1897293 1897634 -7401372 - L2 LINE L2 -519 2795 2468 276 361 143 0 chrX_random 1898757 1898890 -7400116 - MIR3 SINE MIR -40 168 17 299 276 179 67 chrX_random 1899729 1900026 -7398980 + L2 LINE L2 1732 2061 -1253 317 326 0 0 chrX_random 1900731 1900817 -7398189 - L2 LINE L2 -6 3307 3222 26 30 0 0 chrX_random 1901290 1901323 -7397683 + AT_rich Low_complexity Low_complexity 1 33 0 2101 205 102 2 chrX_random 1901865 1902324 -7396682 + MLT1D LTR MaLR 1 505 0 396 249 49 101 chrX_random 1902329 1902748 -7396258 - MLT1H LTR MaLR -8 541 42 878 228 55 15 chrX_random 1902775 1902977 -7396029 + MER63A DNA MER1_type 1 210 0 910 213 0 0 chrX_random 1903079 1903248 -7395758 - FRAM SINE Alu -7 169 1 183 42 0 0 chrX_random 1904544 1904568 -7394438 + (TTCA)n Simple_repeat Simple_repeat 1 24 0 199 316 86 79 chrX_random 1904569 1904708 -7394298 - L2 LINE L2 -10 3262 3123 188 261 14 72 chrX_random 1905359 1905428 -7393578 - L2 LINE L2 -207 3065 3001 7575 163 55 15 chrX_random 1905492 1907054 -7391952 + Charlie5 DNA MER1_type 175 1798 -814 4456 139 11 22 chrX_random 1907063 1907847 -7391159 - L1MB8 LINE L1 -9 6169 5394 3629 150 38 16 chrX_random 1907847 1908607 -7390399 + Charlie5 DNA MER1_type 1785 2561 -51 2086 172 97 0 chrX_random 1909137 1909527 -7389479 + MSTC LTR MaLR 1 428 0 412 238 74 35 chrX_random 1909573 1909775 -7389231 + L1ME4a LINE L1 5908 6117 -4 766 219 141 37 chrX_random 1910367 1910636 -7388370 + LTR50 LTR ERVL 9 305 -490 735 225 158 0 chrX_random 1910646 1910868 -7388138 + LTR50 LTR ERVL 539 795 0 317 136 30 45 chrX_random 1910979 1911045 -7387961 + MER2 DNA MER2_type 1 65 -280 194 354 20 30 chrX_random 1911330 1911429 -7387577 - L2 LINE L2 -672 2642 2545 554 181 55 47 chrX_random 1912086 1912213 -7386793 - MER5B DNA MER1_type -1 177 50 269 227 103 21 chrX_random 1912217 1912314 -7386692 + L1M4 LINE L1 3725 3829 -2317 331 239 15 0 chrX_random 1912317 1912384 -7386622 - MER5B DNA MER1_type -110 68 1 253 307 34 0 chrX_random 1913096 1913184 -7385822 - MIR SINE MIR -72 190 100 652 269 124 5 chrX_random 1913219 1913412 -7385594 + MIR SINE MIR 1 216 -46 2393 116 5 30 chrX_random 1913869 1914241 -7384765 - THE1B LTR MaLR -1 363 1 2225 56 4 0 chrX_random 1914560 1914830 -7384176 - AluY SINE Alu -1 310 40 295 229 96 62 chrX_random 1914926 1915166 -7383840 + L1MC4a LINE L1 3520 3767 -2379 321 26 0 0 chrX_random 1915282 1915320 -7383686 + (TC)n Simple_repeat Simple_repeat 2 39 0 264 143 43 0 chrX_random 1915320 1915390 -7383616 + (TA)n Simple_repeat Simple_repeat 1 73 0 725 299 10 0 chrX_random 1915392 1915593 -7383413 - MIR SINE MIR -58 204 2 874 83 30 0 chrX_random 1915702 1915834 -7383172 - L1MB3 LINE L1 -2 6181 6046 16736 29 0 1 chrX_random 1915843 1918605 -7380401 + L1PA3 LINE L1 3389 6150 -5 1392 303 103 28 chrX_random 1918646 1920364 -7378642 + L1MC4a LINE L1 4030 5384 -762 22 0 0 0 chrX_random 1920376 1920398 -7378608 + AT_rich Low_complexity Low_complexity 1 22 0 395 267 90 2 chrX_random 1920589 1920760 -7378246 + L1MEc LINE L1 1553 1737 -839 292 253 19 68 chrX_random 1921069 1921231 -7377775 + HAL1 LINE L1 2245 2398 -109 216 303 34 34 chrX_random 1921330 1921419 -7377587 - MIR SINE MIR -125 137 49 998 203 11 0 chrX_random 1921440 1921622 -7377384 - MER5A DNA MER1_type -3 186 3 15169 170 16 15 chrX_random 1922241 1922604 -7376402 - L1PA16 LINE L1 0 6882 6521 213 39 0 0 chrX_random 1922604 1922630 -7376376 + (TG)n Simple_repeat Simple_repeat 2 27 0 15169 170 16 15 chrX_random 1922630 1928369 -7370637 - L1PA16 LINE L1 -361 6521 636 1177 166 5 0 chrX_random 1928371 1928570 -7370436 - L1PA16 LINE L1 -6663 200 1 261 104 149 60 chrX_random 1929171 1929238 -7369768 - MLT1J1 LTR MaLR -2 444 372 1517 145 0 0 chrX_random 1929297 1929524 -7369482 + MLT2D LTR ERVL 1 227 -187 1893 166 0 16 chrX_random 1930293 1930600 -7368406 - AluJb SINE Alu -7 305 4 615 203 112 0 chrX_random 1930707 1930850 -7368156 - MER20 DNA MER1_type -39 180 22 2331 78 0 7 chrX_random 1931301 1931597 -7367409 - AluY SINE Alu -16 295 2 1860 146 54 3 chrX_random 1933049 1933344 -7365662 + AluJb SINE Alu 1 310 -2 324 197 15 0 chrX_random 1935184 1935250 -7363756 - L1M4 LINE L1 -1378 4768 4702 4965 219 72 41 chrX_random 1935270 1937519 -7361487 - L1MD2 LINE L1 -248 6111 3790 * 9199 200 35 10 chrX_random 1937516 1940108 -7358898 - L1P4 LINE L1 -464 7140 4491 618 266 51 29 chrX_random 1940106 1940451 -7358555 - L1P4 LINE L1 -5088 2486 2222 * 280 348 22 14 chrX_random 1941195 1941333 -7357673 - L1P4 LINE L1 -5286 2288 2150 * 929 322 40 44 chrX_random 1941331 1941809 -7357197 - L1P4 LINE L1 -6177 1397 922 258 297 11 22 chrX_random 1941798 1941889 -7357117 + L1PA13 LINE L1 1422 1511 -5276 * 526 250 8 0 chrX_random 1941891 1942019 -7356987 - L1M2 LINE L1 -6709 140 12 2409 196 51 27 chrX_random 1942210 1942843 -7356163 - L1MDa LINE L1 -4518 2022 1375 1399 275 30 35 chrX_random 1942845 1943412 -7355594 - L1MEc LINE L1 -4488 1908 1345 350 229 0 0 chrX_random 1943415 1943485 -7355521 - L1MEc LINE L1 -6299 97 28 250 259 0 0 chrX_random 1943486 1943540 -7355466 + MER5B DNA MER1_type 123 176 -2 21 0 0 0 chrX_random 1944095 1944116 -7354890 + AT_rich Low_complexity Low_complexity 1 21 0 182 311 204 29 chrX_random 1945209 1945312 -7353694 + MIR SINE MIR 17 137 -71 420 238 0 0 chrX_random 1945435 1945540 -7353466 + L1MA10 LINE L1 6219 6323 -11 1901 100 43 0 chrX_random 1945641 1945920 -7353086 + L1PA14 LINE L1 5859 6149 -12 267 290 0 0 chrX_random 1946910 1946979 -7352027 - MIR SINE MIR -12 250 182 399 253 0 0 chrX_random 1947114 1947193 -7351813 - L2 LINE L2 -4 3309 3231 44159 40 1 6 chrX_random 1947591 1953775 -7345231 + L1PA4 LINE L1 1 6151 -4 597 272 67 9 chrX_random 1953779 1954003 -7345003 + MLT1C LTR MaLR 171 407 -60 25 65 0 0 chrX_random 1954004 1954050 -7344956 + AT_rich Low_complexity Low_complexity 1 46 0 22 35 0 0 chrX_random 1954131 1954160 -7344846 + AT_rich Low_complexity Low_complexity 1 29 0 1016 254 24 0 chrX_random 1954821 1955034 -7343972 + MER58A DNA MER1_type 1 218 -6 24 32 0 0 chrX_random 1955124 1955155 -7343851 + AT_rich Low_complexity Low_complexity 1 31 0 324 205 0 39 chrX_random 1955596 1955674 -7343332 + MIR SINE MIR 130 204 -58 788 304 53 24 chrX_random 1956442 1956579 -7342427 + LTR16C LTR ERVL 107 256 -235 2658 160 32 0 chrX_random 1956579 1957022 -7341984 - MSTB2 LTR MaLR 0 457 1 788 304 53 24 chrX_random 1957022 1957131 -7341875 + LTR16C LTR ERVL 256 360 -131 1711 76 0 4 chrX_random 1957176 1957401 -7341605 + L1PA8 LINE L1 5947 6170 -2 590 223 77 0 chrX_random 1957412 1957542 -7341464 + LTR16C LTR ERVL 350 489 -2 530 296 66 27 chrX_random 1959263 1959871 -7339135 - L1MEc LINE L1 -4817 1438 790 229 305 47 16 chrX_random 1960222 1960350 -7338656 - L1MEc LINE L1 -5986 219 88 * 390 301 44 31 chrX_random 1960341 1960567 -7338439 + HAL1 LINE L1 790 1018 -1489 28 0 0 0 chrX_random 1960862 1960890 -7338116 + AT_rich Low_complexity Low_complexity 1 28 0 37 23 0 0 chrX_random 1961082 1961126 -7337880 + AT_rich Low_complexity Low_complexity 1 44 0 2397 76 0 3 chrX_random 1961126 1961430 -7337576 - AluY SINE Alu -8 303 1 2103 171 46 108 chrX_random 1961540 1962085 -7336921 - MLT2B1 LTR ERVL -9 511 1 189 0 0 0 chrX_random 1962622 1962643 -7336363 + (A)n Simple_repeat Simple_repeat 1 21 0 545 224 26 0 chrX_random 1962740 1962856 -7336150 - MER96 DNA MER1_type? -56 119 1 210 355 35 49 chrX_random 1962859 1963062 -7335944 - L2 LINE L2 -1171 2143 1944 329 284 187 23 chrX_random 1963081 1963684 -7335322 + L1ME4a LINE L1 5333 6025 -96 338 343 39 20 chrX_random 1963813 1964017 -7334989 - L2 LINE L2 -1389 1925 1718 683 239 161 0 chrX_random 1964189 1964369 -7334637 + MIR SINE MIR 33 241 -21 2437 137 13 3 chrX_random 1964372 1964758 -7334248 - MLT1B LTR MaLR 0 390 1 204 342 37 19 chrX_random 1964761 1964922 -7334084 - L2 LINE L2 -2609 705 542 216 64 64 0 chrX_random 1964932 1964979 -7334027 + (TA)n Simple_repeat Simple_repeat 2 51 0 402 279 43 91 chrX_random 1965773 1966049 -7332957 - L2 LINE L2 -2880 434 172 29 0 0 0 chrX_random 1966187 1966216 -7332790 + AT_rich Low_complexity Low_complexity 1 29 0 4821 58 6 32 chrX_random 1966673 1967333 -7331673 + L1PA7 LINE L1 5511 6153 -1 4674 104 24 1 chrX_random 1967333 1968002 -7331004 + L1PA15 LINE L1 5477 6165 0 2058 107 7 20 chrX_random 1968016 1968316 -7330690 + AluSx SINE Alu 1 296 -16 3883 17 0 15 chrX_random 1968540 1969000 -7330006 - L1PA3 LINE L1 0 6155 5703 350 329 205 14 chrX_random 1970546 1971106 -7327900 + L2 LINE L2 2139 2805 -509 4970 239 65 34 chrX_random 1971157 1972042 -7326964 - L1ME2 LINE L1 -8 6156 5300 2272 113 3 0 chrX_random 1972042 1972352 -7326654 - AluSp SINE Alu 0 313 3 4970 239 65 34 chrX_random 1972352 1974059 -7324947 - L1ME2 LINE L1 -864 5300 3477 5217 128 37 22 chrX_random 1974168 1974618 -7324388 - L1MA4 LINE L1 -62 6238 5796 2120 77 3 35 chrX_random 1974618 1974928 -7324078 - AluY SINE Alu -11 300 1 5217 128 37 22 chrX_random 1974928 1975114 -7323892 - L1MA4 LINE L1 -504 5796 5614 1068 92 6 12 chrX_random 1975114 1975278 -7323728 - L1MA4A LINE L1 -3 6300 6138 5217 128 37 22 chrX_random 1975278 1975548 -7323458 - L1MA4 LINE L1 -686 5614 5317 989 65 14 0 chrX_random 1975550 1975689 -7323317 - L1PA13 LINE L1 0 6163 6023 2936 67 0 3 chrX_random 1975689 1976068 -7322938 - L1PA5 LINE L1 0 6154 5770 39202 64 3 6 chrX_random 1976072 1982021 -7316985 - L1PA5 LINE L1 0 6154 227 2863 72 5 0 chrX_random 1982022 1982398 -7316608 - L1PA13 LINE L1 -127 6036 5659 796 162 40 25 chrX_random 1982398 1982596 -7316410 - L1MA4 LINE L1 -839 5307 5107 454 275 29 49 chrX_random 1982595 1982730 -7316276 - L1MEc LINE L1 -2674 4283 4147 * 1777 153 90 6 chrX_random 1982730 1983063 -7315943 + MER46B DNA MER2_type 1 236 0 454 275 29 49 chrX_random 1983063 1983313 -7315693 - L1MEc LINE L1 -2810 4147 3906 649 122 0 163 chrX_random 1983325 1983472 -7315534 - FLAM_C SINE Alu -18 125 3 2567 262 62 10 chrX_random 1983479 1984547 -7314459 - L1MEc LINE L1 -3063 3894 2799 1068 187 20 10 chrX_random 1984549 1984747 -7314259 - MER20 DNA MER1_type -2 217 18 1130 266 40 38 chrX_random 1984801 1985951 -7313055 - L1MEc LINE L1 -4356 2782 1394 353 368 16 0 chrX_random 1986476 1986669 -7312337 - L1MEc LINE L1 -6170 968 773 309 312 50 28 chrX_random 1988348 1988489 -7310517 + MIR SINE MIR 48 191 -71 263 248 120 70 chrX_random 1989289 1989648 -7309358 - L1ME LINE L1 -5175 905 529 3222 108 21 0 chrX_random 1989774 1990244 -7308762 + L1PA16 LINE L1 5676 6155 -11 369 334 10 31 chrX_random 1990381 1990572 -7308434 + MIR SINE MIR 60 246 -16 582 266 20 50 chrX_random 2391326 2391650 -6907356 - PABL_B LTR ERV1 -212 448 1 565 215 42 62 chrX_random 2391854 2392329 -6906677 - MER83B-int LTR ERV1 -1955 2925 1554 630 122 10 10 chrX_random 2392345 2392443 -6906563 + MER4A LTR ERV1 1 98 -566 1582 114 208 89 chrX_random 2392443 2392804 -6906202 + MER4A LTR ERV1 261 664 0 1029 171 5 20 chrX_random 2392948 2393147 -6905859 - MER4E LTR ERV1 0 779 584 243 0 0 0 chrX_random 2393262 2393289 -6905717 + (T)n Simple_repeat Simple_repeat 1 27 0 324 309 109 23 chrX_random 2393422 2393597 -6905409 - HAL1 LINE L1 -2314 193 4 5266 129 10 7 chrX_random 2393891 2394728 -6904278 - L1PA15 LINE L1 -4 6161 5323 877 217 6 0 chrX_random 2394728 2394903 -6904103 - AluJb SINE Alu -2 310 135 3463 198 31 12 chrX_random 2394905 2395377 -6903629 - L1PA15 LINE L1 -815 5331 4835 1724 150 55 30 chrX_random 2395377 2395743 -6903263 + THE1C LTR MaLR 1 375 0 3463 198 31 12 chrX_random 2395743 2396107 -6902899 - L1PA15 LINE L1 -1311 4835 4479 303 293 69 6 chrX_random 2396955 2397129 -6901877 - L1ME LINE L1 -351 5770 5586 1037 184 37 129 chrX_random 2397712 2398114 -6900892 + MLT1A1 LTR MaLR 1 365 0 333 320 49 48 chrX_random 2398312 2398419 -6900587 + L1MDa LINE L1 1581 1686 -4880 2138 118 59 36 chrX_random 2398419 2398775 -6900231 - THE1B LTR MaLR 0 364 1 333 320 49 48 chrX_random 2398775 2398951 -6900055 + L1MDa LINE L1 1686 1888 -4678 3702 104 21 14 chrX_random 2398956 2399525 -6899481 - L1PB1 LINE L1 0 6151 5579 477 136 0 0 chrX_random 2399527 2399635 -6899371 + AluSg/x SINE Alu 217 324 0 829 185 26 0 chrX_random 2399806 2399957 -6899049 + PABL_B LTR ERV1 513 667 0 1679 247 45 29 chrX_random 2399957 2401004 -6898002 + PABL_B-int LTR ERV1 2 1239 -5883 6779 259 2 4 chrX_random 2401115 2402489 -6896517 + PABL_B-int LTR ERV1 2690 4061 -3061 2415 226 42 9 chrX_random 2402485 2403384 -6895622 + PABL_B-int LTR ERV1 4926 5886 -1236 * 1844 217 27 86 chrX_random 2403408 2403920 -6895086 + PABL_B-int LTR ERV1 6641 7122 0 481 273 34 48 chrX_random 2403920 2404129 -6894877 + PABL_B LTR ERV1 1 206 -461 949 180 17 6 chrX_random 2404260 2404432 -6894574 + PABL_B LTR ERV1 494 667 0 965 220 14 25 chrX_random 2404436 2404713 -6894293 + MER57-int LTR ERV1 2299 2572 -2551 3376 230 89 49 chrX_random 2404815 2406649 -6892357 + MER57-int LTR ERV1 2493 4103 -768 1531 253 51 13 chrX_random 2406761 2407153 -6891853 + MER57-int LTR ERV1 6738 7144 -393 1120 183 25 38 chrX_random 2407153 2407393 -6891613 + LTR54 LTR ERV1 1 237 -273 295 237 31 29 chrX_random 2407435 2407531 -6891475 + MLT1G1 LTR MaLR 460 547 -2 2293 227 91 29 chrX_random 2408015 2408467 -6890539 - MER50 LTR ERV1 0 734 224 2028 140 0 10 chrX_random 2408467 2408946 -6890060 - AluSc SINE Alu 0 309 1 2293 227 91 29 chrX_random 2408946 2409176 -6889830 - MER50 LTR ERV1 -510 224 10 8940 123 23 6 chrX_random 2409176 2411007 -6887999 - MER50-int LTR ERV1 -2 7203 4164 2755 202 88 3 chrX_random 2411007 2411600 -6887406 - MER50-int LTR ERV1 -3002 4203 3561 1113 163 69 0 chrX_random 2411593 2411795 -6887211 - MER50-int LTR ERV1 -1076 3804 3589 * 539 255 0 0 chrX_random 2411800 2411906 -6887100 - MER50-int LTR ERV1 -4310 2895 2790 * 5265 168 67 29 chrX_random 2411889 2413473 -6885533 - MER50-int LTR ERV1 -421 4796 3274 189 0 0 0 chrX_random 2413473 2413494 -6885512 + (GA)n Simple_repeat Simple_repeat 1 21 0 5265 168 67 29 chrX_random 2413494 2413592 -6885414 - MER50-int LTR ERV1 -1943 3274 4 2162 235 93 23 chrX_random 2413641 2414296 -6884710 - MER50 LTR ERV1 0 734 34 5632 141 23 45 chrX_random 2415384 2416479 -6882527 + MER11C LTR ERVK 1 1071 0 493 240 52 7 chrX_random 2416549 2416703 -6882303 - L1MA9 LINE L1 -36 6276 6116 * 1340 162 15 18 chrX_random 2416702 2416751 -6882255 + L1MA1 LINE L1 5346 5394 -897 1793 183 10 0 chrX_random 2416751 2417046 -6881960 + AluJo SINE Alu 2 299 -13 1340 162 15 18 chrX_random 2417046 2417268 -6881738 + L1MA1 LINE L1 5394 5616 -675 2654 115 8 0 chrX_random 2417306 2417705 -6881301 + L1MA1 LINE L1 5842 6243 -59 29 84 0 0 chrX_random 2417711 2417782 -6881224 + AT_rich Low_complexity Low_complexity 1 71 0 837 206 50 153 chrX_random 2418404 2418821 -6880185 + MLT1A2 LTR MaLR 1 374 0 2043 170 0 15 chrX_random 2419528 2419870 -6879136 + MER1B DNA MER1_type 1 337 0 264 313 20 50 chrX_random 2419897 2419996 -6879010 - L2 LINE L2 -564 2750 2655 450 0 0 0 chrX_random 2420127 2420177 -6878829 + (TG)n Simple_repeat Simple_repeat 1 50 0 630 146 0 0 chrX_random 2420178 2420274 -6878732 - AluJb SINE Alu -34 278 183 907 154 0 0 chrX_random 2420274 2420410 -6878596 - FLAM_C SINE Alu -7 136 1 270 294 140 7 chrX_random 2421402 2421538 -6877468 - MIR SINE MIR -57 205 52 455 252 0 0 chrX_random 2421564 2421675 -6877331 - L1MC4 LINE L1 -400 7642 7532 1522 191 69 20 chrX_random 2421676 2421979 -6877027 - MLT1A1 LTR MaLR 0 365 48 2572 224 88 31 chrX_random 2422045 2422359 -6876647 - L1MC4 LINE L1 -528 7514 7219 1385 209 140 9 chrX_random 2422359 2422709 -6876297 - MSTD LTR MaLR 0 396 1 2572 224 88 31 chrX_random 2422709 2423204 -6875802 - L1MC4 LINE L1 -823 7219 6659 4329 186 29 34 chrX_random 2423764 2424602 -6874404 - L1MA7 LINE L1 -10 6281 5440 2076 136 19 48 chrX_random 2424602 2424977 -6874029 - THE1B LTR MaLR 0 364 1 11338 104 6 1 chrX_random 2424977 2426548 -6872458 - THE1B-int LTR MaLR 0 1580 1 1962 148 18 73 chrX_random 2426548 2426933 -6872073 - THE1B LTR MaLR 0 364 1 4329 186 29 34 chrX_random 2426933 2427044 -6871962 - L1MA7 LINE L1 -849 5442 5332 1955 133 61 19 chrX_random 2427044 2427404 -6871602 - THE1C LTR MaLR 0 375 1 4329 186 29 34 chrX_random 2427404 2427740 -6871266 - L1MA7 LINE L1 -959 5332 4999 244 240 13 80 chrX_random 2427895 2427970 -6871036 - L2 LINE L2 0 3313 3244 2072 188 70 8 chrX_random 2428531 2428930 -6870076 + MSTA LTR MaLR 1 424 -4 1017 254 67 36 chrX_random 2429149 2429508 -6869498 - L1ME1 LINE L1 -10 6156 5787 535 130 11 0 chrX_random 2429509 2429601 -6869405 + L1 LINE L1 4904 4996 -1150 246 200 80 13 chrX_random 2429618 2429693 -6869313 - L1ME1 LINE L1 -380 5784 5705 * 1147 74 0 12 chrX_random 2429677 2429839 -6869167 + L1MA1 LINE L1 6105 6264 -38 225 178 0 0 chrX_random 2430544 2430589 -6868417 + (CA)n Simple_repeat Simple_repeat 2 46 0 21 36 0 0 chrX_random 2431051 2431079 -6867927 + AT_rich Low_complexity Low_complexity 1 28 0 1282 240 130 60 chrX_random 2431321 2431465 -6867541 + MLT1F1 LTR MaLR 38 170 -397 249 33 0 0 chrX_random 2431465 2431495 -6867511 + (TC)n Simple_repeat Simple_repeat 1 30 0 1282 240 130 60 chrX_random 2431495 2431777 -6867229 + MLT1F1 LTR MaLR 170 504 -63 2527 156 18 2 chrX_random 2431777 2432212 -6866794 + L1PA16 LINE L1 5708 6149 -17 1282 240 130 60 chrX_random 2432212 2432268 -6866738 + MLT1F1 LTR MaLR 504 555 -12 342 0 0 0 chrX_random 2432270 2432308 -6866698 + (TG)n Simple_repeat Simple_repeat 2 39 0 204 205 0 0 chrX_random 2432308 2432347 -6866659 + GA-rich Low_complexity Low_complexity 2 40 0 28 0 0 0 chrX_random 2432528 2432556 -6866450 + AT_rich Low_complexity Low_complexity 1 28 0 195 42 0 0 chrX_random 2433927 2433951 -6865055 + (TTCA)n Simple_repeat Simple_repeat 4 27 0 349 391 107 8 chrX_random 2434280 2434523 -6864483 - L2 LINE L2 -338 2976 2710 1262 286 72 35 chrX_random 2434906 2435781 -6863225 + L1M4 LINE L1 4513 5420 -742 738 276 41 105 chrX_random 2435844 2436283 -6862723 - MLT1E2-int LTR MaLR 0 1371 961 822 237 39 0 chrX_random 2436487 2436694 -6862312 + L1MA4 LINE L1 14 228 -5100 3472 124 2 28 chrX_random 2436737 2437310 -6861696 - L1PA15 LINE L1 0 6165 5608 3255 181 45 21 chrX_random 2437312 2438116 -6860890 + L1MA4 LINE L1 379 1211 -4117 3242 190 47 6 chrX_random 2438098 2438794 -6860212 + L1MA4 LINE L1 3470 4194 -2134 * 462 198 0 4 chrX_random 2438794 2439031 -6859975 + AluJb SINE Alu 1 333 0 2471 193 29 14 chrX_random 2439031 2439856 -6859150 + L1MA4 LINE L1 4182 4993 -1489 2303 95 3 0 chrX_random 2439856 2440161 -6858845 - AluSp SINE Alu -7 306 1 2471 193 29 14 chrX_random 2440161 2441402 -6857604 + L1MA4 LINE L1 4993 6479 -3 2311 140 22 0 chrX_random 2441474 2441830 -6857176 - THE1B LTR MaLR 0 364 1 10068 121 36 2 chrX_random 2441830 2443357 -6855649 - THE1B-int LTR MaLR 0 1580 2 2617 108 8 0 chrX_random 2443358 2443719 -6855287 - THE1B LTR MaLR 0 364 1 1182 271 46 38 chrX_random 2443721 2444277 -6854729 - MLT1E2-int LTR MaLR -768 603 2 1218 269 108 55 chrX_random 2444283 2444848 -6854158 - MLT1E2 LTR MaLR -3 623 29 2932 119 10 95 chrX_random 2445697 2446275 -6852731 - MER61E LTR ERV1 -40 529 1 1364 200 16 3 chrX_random 2447399 2447709 -6851297 - L1MA4 LINE L1 -6 6294 5981 22 0 0 0 chrX_random 2447969 2447991 -6851015 + AT_rich Low_complexity Low_complexity 1 22 0 640 270 94 25 chrX_random 2448422 2449014 -6849992 - MER114 LTR ERV 0 648 7 2456 122 11 0 chrX_random 2450453 2450813 -6848193 + THE1B LTR MaLR 1 364 0 24 0 0 0 chrX_random 2451441 2451465 -6847541 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chrX_random 2451857 2451888 -6847118 + AT_rich Low_complexity Low_complexity 1 31 0 1431 116 49 0 chrX_random 2452795 2453020 -6845986 + L1PB2 LINE L1 5914 6149 -2 32 26 0 0 chrX_random 2453356 2453395 -6845611 + AT_rich Low_complexity Low_complexity 1 39 0 235 170 19 0 chrX_random 2453465 2453518 -6845488 - L1MC4 LINE L1 0 8042 7989 752 138 8 0 chrX_random 2453523 2453646 -6845360 - L1PA15 LINE L1 0 6165 6042 563 93 0 0 chrX_random 2453646 2453721 -6845285 - L1PA15 LINE L1 -49 6116 6042 * 2352 141 3 3 chrX_random 2453706 2454068 -6844938 - L1PA15 LINE L1 -34 6131 5770 3772 125 93 8 chrX_random 2454094 2454741 -6844265 - L1PA13 LINE L1 -6 6157 5456 435 19 0 0 chrX_random 2455828 2455880 -6843126 + (TA)n Simple_repeat Simple_repeat 2 53 0 291 246 87 0 chrX_random 2456054 2456123 -6842883 + LTR54B LTR ERV1 14 88 -410 319 294 222 0 chrX_random 2456174 2456300 -6842706 + MER57A LTR ERV1 195 348 -55 239 167 21 0 chrX_random 2456302 2456350 -6842656 + (CTTTG)n Simple_repeat Simple_repeat 4 52 0 339 356 43 24 chrX_random 2456475 2456683 -6842323 + HAL1 LINE L1 1458 1669 -838 664 299 79 21 chrX_random 2457243 2457569 -6841437 + LTR16A LTR ERVL 65 450 0 736 303 39 11 chrX_random 2457569 2457850 -6841156 + HERV16 LTR ERVL 1 289 -4707 264 292 15 0 chrX_random 2457880 2457945 -6841061 + MER52A LTR ERV1 1 66 -1689 7195 171 63 57 chrX_random 2458387 2459932 -6839074 + MER52A LTR ERV1 202 1755 0 21 0 0 0 chrX_random 2460750 2460771 -6838235 + AT_rich Low_complexity Low_complexity 1 21 0 1065 87 0 0 chrX_random 2461420 2461558 -6837448 + AluSq/x SINE Alu 1 138 -175 4322 244 39 28 chrX_random 2461559 2462782 -6836224 - L1PA13 LINE L1 -3136 3661 2453 2300 108 0 9 chrX_random 2462782 2463098 -6835908 + AluSq SINE Alu 1 313 0 4322 244 39 28 chrX_random 2463098 2463227 -6835779 - L1PA13 LINE L1 -4344 2453 2327 243 103 0 0 chrX_random 2463227 2463266 -6835740 + (TATTG)n Simple_repeat Simple_repeat 5 43 0 4322 244 39 28 chrX_random 2463266 2464157 -6834849 - L1PA13 LINE L1 -4470 2327 1283 1452 310 36 38 chrX_random 2464252 2464829 -6834177 - L1PA13 LINE L1 -5892 895 320 4471 140 18 5 chrX_random 2464839 2465573 -6833433 + L1PA15 LINE L1 5417 6159 -6 21 0 0 0 chrX_random 2465809 2465830 -6833176 + AT_rich Low_complexity Low_complexity 1 21 0 1580 247 51 21 chrX_random 2466419 2466929 -6832077 - LTR27 LTR ERV1 -137 499 3 1181 246 88 0 chrX_random 2468612 2468909 -6830097 - MER82 DNA MER2_type 0 653 331 562 218 38 8 chrX_random 2468951 2469084 -6829922 - MER82 DNA MER2_type -515 138 2 231 152 0 0 chrX_random 2470634 2470680 -6828326 + (CA)n Simple_repeat Simple_repeat 2 47 0 2321 162 18 20 chrX_random 2472103 2472542 -6826464 + L1MA7 LINE L1 5688 6125 -166 535 197 0 0 chrX_random 2472645 2472762 -6826244 + L1MA7 LINE L1 6175 6291 0 11181 233 40 39 chrX_random 2473391 2477463 -6821543 - L1 LINE L1 -2450 4398 209 1939 199 72 106 chrX_random 2477933 2478587 -6820419 + L1MD2 LINE L1 5602 6233 -9 210 171 0 0 chrX_random 2479017 2479058 -6819948 + A-rich Low_complexity Low_complexity 3 43 0 212 229 21 0 chrX_random 2480454 2480502 -6818504 + (TA)n Simple_repeat Simple_repeat 2 50 0 261 305 52 32 chrX_random 2480857 2481011 -6817995 - L1ME LINE L1 -571 5550 5394 438 334 46 66 chrX_random 2481102 2481662 -6817344 - L1ME LINE L1 -868 5278 4730 304 319 103 52 chrX_random 2481810 2482042 -6816964 - L1ME LINE L1 -1838 4308 4065 25 0 0 0 chrX_random 2482079 2482104 -6816902 + AT_rich Low_complexity Low_complexity 1 25 0 308 325 78 13 chrX_random 2482271 2482425 -6816581 - L1ME LINE L1 -3574 2572 2409 30 27 0 0 chrX_random 2482425 2482462 -6816544 + AT_rich Low_complexity Low_complexity 1 37 0 2171 122 0 0 chrX_random 2483025 2483321 -6815685 - AluSx SINE Alu -16 296 1 335 405 78 6 chrX_random 2483750 2484071 -6814935 - L1MC/D LINE L1 -2148 5660 5317 2105 157 104 13 chrX_random 2485140 2485583 -6813423 - MER31A LTR ERV1 0 543 1 1685 184 33 9 chrX_random 2486323 2486654 -6812352 - L1PA16 LINE L1 -16 6150 5812 2269 135 23 116 chrX_random 2486656 2487174 -6811832 + L1PA16 LINE L1 5333 5802 -364 743 318 53 46 chrX_random 2487434 2487849 -6811157 + MLT1K LTR MaLR 158 575 -13 2062 140 18 0 chrX_random 2488281 2488623 -6810383 - L1PA16 LINE L1 0 6166 5819 220 428 38 13 chrX_random 2491425 2491584 -6807422 - L3 LINE CR1 -112 1465 1303 29 28 0 0 chrX_random 2491830 2491866 -6807140 + AT_rich Low_complexity Low_complexity 1 36 0 1858 95 0 0 chrX_random 2491958 2492199 -6806807 + AluSg1 SINE Alu 39 279 -30 21 36 0 0 chrX_random 2492203 2492231 -6806775 + AT_rich Low_complexity Low_complexity 1 28 0 24 67 0 0 chrX_random 2492346 2492391 -6806615 + AT_rich Low_complexity Low_complexity 1 45 0 342 196 53 45 chrX_random 2492998 2493131 -6805875 + (CATATA)n Simple_repeat Simple_repeat 2 135 0 6257 107 28 8 chrX_random 2493234 2494227 -6804779 - L1MA2 LINE L1 0 6304 5292 1105 231 32 21 chrX_random 2494248 2494530 -6804476 - L1M1 LINE L1 -7268 297 13 1015 240 64 0 chrX_random 2494675 2494925 -6804081 + L1ME LINE L1 5460 5725 -439 252 230 0 40 chrX_random 2495807 2495881 -6803125 - MER92A LTR ERV1 0 412 342 9178 185 19 2 chrX_random 2496578 2498197 -6800809 - ERVL LTR ERVL -1389 4375 2730 239 284 132 74 chrX_random 2498289 2498479 -6800527 - LTR33A LTR ERVL -265 258 58 3325 23 0 2 chrX_random 2500571 2500969 -6798037 + L1PA2 LINE L1 5759 6155 0 235 292 31 0 chrX_random 2501409 2501505 -6797501 - L1MDa LINE L1 -4816 1313 1215 504 233 0 0 chrX_random 2501604 2501690 -6797316 - Tigger7 DNA MER2_type 0 2587 2502 1117 256 39 4 chrX_random 2501694 2501952 -6797054 - Tigger7 DNA MER2_type -466 267 1 278 273 80 34 chrX_random 2501952 2502190 -6796816 - L1MDa LINE L1 -4939 1180 932 4035 143 23 16 chrX_random 2502290 2502989 -6796017 + L1PA16 LINE L1 5456 6159 -7 213 363 20 10 chrX_random 2503483 2503585 -6795421 - L2 LINE L2 -596 2718 2616 1158 230 121 44 chrX_random 2504024 2504363 -6794643 - MLT1A1 LTR MaLR 0 365 1 505 265 137 20 chrX_random 2504802 2505051 -6793955 - L3 LINE CR1 -513 1064 787 1658 183 13 3 chrX_random 2505622 2505928 -6793078 + AluJb SINE Alu 1 309 -3 224 224 13 53 chrX_random 2506684 2506760 -6792246 + A-rich Low_complexity Low_complexity 6 78 0 302 276 51 0 chrX_random 2506839 2506937 -6792069 + MIR SINE MIR 86 188 -74 395 200 283 0 chrX_random 2506968 2507113 -6791893 + L1MD2 LINE L1 6162 6347 -12 234 0 0 0 chrX_random 2507154 2507180 -6791826 + (T)n Simple_repeat Simple_repeat 1 26 0 31 26 0 0 chrX_random 2507500 2507538 -6791468 + AT_rich Low_complexity Low_complexity 1 38 0 234 0 0 0 chrX_random 2507570 2507596 -6791410 + (T)n Simple_repeat Simple_repeat 1 26 0 183 270 63 109 chrX_random 2507896 2508070 -6790936 + L3 LINE CR1 1306 1471 -106 230 268 28 0 chrX_random 2508081 2508152 -6790854 + L2 LINE L2 3229 3301 -12 195 383 25 0 chrX_random 2508205 2508286 -6790720 + L3 LINE CR1 1491 1573 -4 229 283 242 0 chrX_random 2509283 2509382 -6789624 - MIR SINE MIR -73 189 67 1284 299 37 49 chrX_random 2509384 2509900 -6789106 + L1MEc LINE L1 204 714 -5849 677 150 31 62 chrX_random 2509900 2510060 -6788946 - L1PA15 LINE L1 -3 6162 6008 1284 299 37 49 chrX_random 2510060 2510135 -6788871 + L1MEc LINE L1 714 788 -5775 956 190 11 0 chrX_random 2510139 2510323 -6788683 - MLT1B LTR MaLR -10 380 195 658 146 13 20 chrX_random 2510357 2510508 -6788498 + CT-rich Low_complexity Low_complexity 3 152 0 478 199 37 68 chrX_random 2510516 2510624 -6788382 - MLT1B LTR MaLR -234 156 53 1859 219 0 6 chrX_random 2510624 2510989 -6788017 + MLT1A1 LTR MaLR 3 365 0 478 199 37 68 chrX_random 2510989 2511041 -6787965 - MLT1B LTR MaLR -337 53 1 25 0 0 0 chrX_random 2511135 2511160 -6787846 + AT_rich Low_complexity Low_complexity 1 25 0 862 238 22 5 chrX_random 2511240 2511454 -6787552 + L1MEc LINE L1 800 881 -5503 2487 279 49 59 chrX_random 2511468 2512713 -6786293 + L1M4 LINE L1 8 1240 -5302 1032 228 46 14 chrX_random 2512721 2513006 -6786000 + L1M4 LINE L1 1524 1817 -4829 * 3435 233 24 23 chrX_random 2512979 2513989 -6785017 + L1M4 LINE L1 4715 5725 -919 5097 156 22 16 chrX_random 2515190 2516192 -6782814 - L1PA16 LINE L1 0 6166 5308 3697 198 3 54 chrX_random 2516190 2517105 -6781901 + L1PA16 LINE L1 4450 5318 -828 * 2339 159 20 0 chrX_random 2517288 2517683 -6781323 - MER57A LTR ERV1 0 403 1 285 243 69 49 chrX_random 2518399 2518543 -6780463 + MER112 DNA MER1_type 18 164 -96 290 183 0 17 chrX_random 2518965 2519025 -6779981 - AluJb SINE Alu -1 301 243 1131 84 0 0 chrX_random 2519025 2519168 -6779838 - AluJb SINE Alu -169 143 1 536 29 14 0 chrX_random 2519292 2519362 -6779644 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 476 253 30 94 chrX_random 2520458 2520691 -6778315 - MER112 DNA MER1_type -8 252 35 3030 161 7 11 chrX_random 2520736 2521301 -6777705 + L1MA4 LINE L1 5735 6297 -3 22 0 0 0 chrX_random 2521367 2521389 -6777617 + AT_rich Low_complexity Low_complexity 1 22 0 213 228 70 0 chrX_random 2521404 2521461 -6777545 - MIR SINE MIR -31 231 171 299 319 9 26 chrX_random 2522990 2523103 -6775903 + MER5A DNA MER1_type 7 117 -72 1934 259 113 23 chrX_random 2523218 2523403 -6775603 + MER20B DNA MER1_type 17 184 -599 1559 196 68 104 chrX_random 2523403 2523978 -6775028 + MLT2B3 LTR ERVL 1 554 0 1934 259 113 23 chrX_random 2523978 2524490 -6774516 + MER20B DNA MER1_type 184 777 -6 2548 115 8 3 chrX_random 2524727 2525100 -6773906 + THE1C LTR MaLR 1 375 0 434 150 88 0 chrX_random 2525101 2525181 -6773825 + MER20 DNA MER1_type 17 103 -116 4514 182 16 23 chrX_random 2525962 2526057 -6772949 + L1PB4 LINE L1 4640 4734 -1422 2349 82 0 13 chrX_random 2526057 2526363 -6772643 - AluY SINE Alu -9 302 1 4514 182 16 23 chrX_random 2526363 2527433 -6771573 + L1PB4 LINE L1 4734 5798 -358 258 32 0 0 chrX_random 2527433 2527464 -6771542 + (CA)n Simple_repeat Simple_repeat 1 31 0 4514 182 16 23 chrX_random 2527464 2527779 -6771227 + L1PB4 LINE L1 5798 6114 -42 239 108 0 0 chrX_random 2527823 2527860 -6771146 + L1PB4 LINE L1 6115 6151 -5 4701 196 25 18 chrX_random 2527882 2529344 -6769662 + L1MA7 LINE L1 4812 6290 -1 180 125 0 0 chrX_random 2529895 2529927 -6769079 + (CA)n Simple_repeat Simple_repeat 1 32 0 833 286 23 10 chrX_random 2530159 2530460 -6768546 + L1MC4 LINE L1 7586 7890 -152 210 208 0 21 chrX_random 2530481 2530529 -6768477 + (TTA)n Simple_repeat Simple_repeat 3 49 0 592 319 43 55 chrX_random 2530544 2530974 -6768032 + LTR16A LTR ERVL 1 435 -15 1627 353 38 7 chrX_random 2531651 2532380 -6766626 + ERVL LTR ERVL 748 1499 -3497 254 344 109 0 chrX_random 2532649 2532777 -6766229 + ERVL LTR ERVL 1855 1996 -3658 865 231 19 9 chrX_random 2532791 2533003 -6766003 - MLT1F1 LTR MaLR 0 567 354 1321 193 35 118 chrX_random 2533014 2533419 -6765587 - MLT1A2 LTR MaLR 0 374 4 1195 268 70 12 chrX_random 2533422 2533751 -6765255 - MLT1F1 LTR MaLR -219 348 1 561 340 33 12 chrX_random 2533793 2534034 -6764972 + ERVL LTR ERVL 2077 2322 -2674 302 353 25 20 chrX_random 2534075 2534279 -6764727 + ERVL LTR ERVL 2428 2632 -2853 291 391 12 16 chrX_random 2534434 2534682 -6764324 - HERVL LTR ERVL -1052 4602 4356 * 447 331 47 16 chrX_random 2534669 2534926 -6764080 + ERVL LTR ERVL 4894 5158 -606 955 273 25 78 chrX_random 2535297 2535774 -6763232 + LTR16A1 LTR ERVL 5 456 -1 334 264 33 0 chrX_random 2536293 2536384 -6762622 - MIR3 SINE MIR -7 201 108 1749 184 42 6 chrX_random 2537322 2537653 -6761353 + MER61A LTR ERV1 1 343 0 2320 153 143 18 chrX_random 2537655 2538157 -6760849 + MER61A-int LTR ERV1 3 567 -4650 * 23944 98 6 10 chrX_random 2538140 2541928 -6757078 + MER61A-int LTR ERV1 1399 5217 0 1647 192 43 6 chrX_random 2541929 2542257 -6756749 + MER61A LTR ERV1 2 341 -2 213 125 0 25 chrX_random 2543246 2543286 -6755720 + (TATATG)n Simple_repeat Simple_repeat 4 42 0 1877 157 7 26 chrX_random 2543382 2543688 -6755318 - AluJo SINE Alu -10 302 3 244 324 135 0 chrX_random 2544541 2544652 -6754354 - MER5A DNA MER1_type -1 188 63 974 243 100 51 chrX_random 2546150 2546520 -6752486 + L2 LINE L2 2131 2518 -796 824 291 98 37 chrX_random 2546852 2547475 -6751531 + L2 LINE L2 2649 3313 0 24 32 0 0 chrX_random 2548307 2548338 -6750668 + AT_rich Low_complexity Low_complexity 1 31 0 483 161 0 0 chrX_random 2549161 2549248 -6749758 - L1MB1 LINE L1 -4 6164 6078 2562 124 56 7 chrX_random 2550975 2551403 -6747603 - L1MB1 LINE L1 -3 6165 5717 2056 164 24 3 chrX_random 2551403 2551775 -6747231 + L1MB1 LINE L1 5325 5704 -464 2132 121 13 0 chrX_random 2551894 2552192 -6746814 - AluSp SINE Alu -9 304 3 287 296 34 0 chrX_random 2552596 2552684 -6746322 + MLT1I LTR MaLR 63 153 -256 385 252 181 0 chrX_random 2553195 2553350 -6745656 - HAL1 LINE L1 -883 1624 1442 24 0 0 0 chrX_random 2553354 2553378 -6745628 + AT_rich Low_complexity Low_complexity 1 24 0 302 314 65 55 chrX_random 2553411 2553701 -6745305 - L1MEd LINE L1 -4902 1217 925 25 83 0 0 chrX_random 2553709 2553769 -6745237 + AT_rich Low_complexity Low_complexity 1 60 0 284 275 11 0 chrX_random 2554058 2554149 -6744857 + L1ME3 LINE L1 5879 5970 -192 1644 279 92 64 chrX_random 2554198 2555770 -6743236 - L1M4 LINE L1 -1279 5103 3488 589 257 26 48 chrX_random 2555816 2556127 -6742879 - L1M4 LINE L1 -4916 1468 1165 12317 209 35 10 chrX_random 2557425 2559943 -6739063 + ERVL LTR ERVL 1823 4402 -1362 1632 225 23 3 chrX_random 2559946 2560292 -6738714 + MLT1A1 LTR MaLR 1 353 -12 3392 270 27 9 chrX_random 2560293 2561344 -6737662 + ERVL LTR ERVL 4355 5457 -197 3191 237 70 3 chrX_random 2561398 2562304 -6736702 - L1MB7 LINE L1 -28 6156 5188 364 169 0 0 chrX_random 2562392 2562463 -6736543 - L1PA16 LINE L1 -1 6165 6095 782 256 38 14 chrX_random 2562463 2562752 -6736254 - L1MB7 LINE L1 -945 5201 4906 373 121 49 30 chrX_random 2562780 2562878 -6736128 - L1MA5 LINE L1 -34 6266 6173 1562 56 0 15 chrX_random 2562880 2563076 -6735930 - AluY SINE Alu -9 302 110 1869 78 29 0 chrX_random 2563077 2563320 -6735686 - THE1A LTR MaLR -72 283 34 11434 99 5 2 chrX_random 2563320 2564884 -6734122 - THE1A-int LTR MaLR -11 1569 1 2731 76 3 0 chrX_random 2564884 2565238 -6733768 - THE1A LTR MaLR 0 355 1 1621 180 0 39 chrX_random 2565279 2565584 -6733422 + AluJb SINE Alu 6 298 -14 227 228 144 24 chrX_random 2565732 2565899 -6733107 - L1ME4a LINE L1 -44 6077 5891 348 303 45 39 chrX_random 2566190 2566345 -6732661 - MLT1J LTR MaLR -104 407 252 21 71 0 0 chrX_random 2567983 2568025 -6730981 + AT_rich Low_complexity Low_complexity 1 42 0 218 200 22 0 chrX_random 2568436 2568481 -6730525 + CT-rich Low_complexity Low_complexity 1 46 0 24 32 0 0 chrX_random 2568483 2568514 -6730492 + AT_rich Low_complexity Low_complexity 1 31 0 1396 258 74 37 chrX_random 2568698 2569160 -6729846 - MLT1D LTR MaLR -3 502 24 281 325 12 44 chrX_random 2569870 2570030 -6728976 + L2 LINE L2 1903 2057 -1257 508 351 93 34 chrX_random 2570151 2570647 -6728359 - L2 LINE L2 -781 2533 2009 507 339 59 8 chrX_random 2570655 2570909 -6728097 + MLT1L LTR MaLR 3 269 -346 376 251 12 80 chrX_random 2571339 2571502 -6727504 + MER93a LTR ERV1 4 155 -247 9688 124 8 1 chrX_random 2571502 2572892 -6726114 + MER52-int LTR ERV1 3058 4456 -2635 616 126 0 0 chrX_random 2572893 2572980 -6726026 - MER52-int LTR ERV1 -2404 4687 4601 345 96 77 0 chrX_random 2572978 2573030 -6725976 + MER52-int LTR ERV1 4471 4526 -2565 * 1766 91 0 4 chrX_random 2573261 2573491 -6725515 - AluSg/x SINE Alu -6 306 78 382 273 189 8 chrX_random 2574203 2574335 -6724671 - MER5A DNA MER1_type -1 188 33 733 309 109 22 chrX_random 2574749 2575153 -6723853 + L1M4 LINE L1 1273 1711 -5752 2380 268 58 21 chrX_random 2575170 2576150 -6722856 + L1M4 LINE L1 5420 6435 -1130 439 239 7 0 chrX_random 2576148 2576286 -6722720 - L1 LINE L1 -2759 3387 3249 * 257 200 27 0 chrX_random 2576280 2576355 -6722651 + L1M4 LINE L1 3325 3401 -4164 * 1017 103 0 0 chrX_random 2576456 2576601 -6722405 + L1PA13 LINE L1 6008 6152 -11 228 201 32 4 chrX_random 2576617 2576679 -6722327 + L1M4 LINE L1 3336 3400 -4165 * 2806 228 25 26 chrX_random 2576659 2577554 -6721452 + L1M1 LINE L1 3461 4358 -3207 706 253 30 15 chrX_random 2577554 2577752 -6721254 + MIR SINE MIR 59 259 -3 322 315 28 32 chrX_random 2577998 2578214 -6720792 - L1MEd LINE L1 -4960 1159 945 413 330 35 65 chrX_random 2578865 2579095 -6719911 - L2 LINE L2 -2760 554 332 21 0 0 0 chrX_random 2579666 2579687 -6719319 + AT_rich Low_complexity Low_complexity 1 21 0 211 281 18 0 chrX_random 2580034 2580091 -6718915 + MIR SINE MIR 97 154 -108 1981 88 0 4 chrX_random 2580177 2580455 -6718551 + AluY SINE Alu 35 311 0 931 168 16 7 chrX_random 2580492 2580751 -6718255 - MLT1A1 LTR MaLR 0 365 28 4317 144 1 0 chrX_random 2580753 2581456 -6717550 - L1PA13 LINE L1 0 6163 5460 2404 115 8 3 chrX_random 2581456 2581812 -6717194 + MER9 LTR ERVK 1 358 -153 1637 161 10 10 chrX_random 2581912 2582203 -6716803 + L1P4 LINE L1 1531 1821 -4966 * 10028 196 27 17 chrX_random 2582179 2584639 -6714367 + L1P4 LINE L1 3260 5615 -1197 288 0 0 0 chrX_random 2584639 2584671 -6714335 + (CA)n Simple_repeat Simple_repeat 1 32 0 10028 196 27 17 chrX_random 2584671 2585489 -6713517 + L1P4 LINE L1 5615 6424 -388 255 294 39 0 chrX_random 2587394 2587496 -6711510 - MER103 DNA DNA -5 161 56 284 164 36 0 chrX_random 2587555 2587665 -6711341 + (TA)n Simple_repeat Simple_repeat 2 115 0 1498 181 96 0 chrX_random 2587761 2588042 -6710964 + AluJb SINE Alu 1 308 -4 3051 171 56 0 chrX_random 2588617 2588817 -6710189 + MER6A DNA MER2_type 17 204 -661 297 0 0 0 chrX_random 2588817 2588850 -6710156 + (TG)n Simple_repeat Simple_repeat 1 33 0 * 450 0 0 0 chrX_random 2588849 2588899 -6710107 + (GA)n Simple_repeat Simple_repeat 1 50 0 3051 171 56 0 chrX_random 2588850 2589255 -6709751 + MER6A DNA MER2_type 204 604 -1 271 333 0 22 chrX_random 2589641 2589731 -6709275 + MER5B DNA MER1_type 13 100 -78 202 314 35 12 chrX_random 2589795 2589881 -6709125 - MIR3 SINE MIR -36 172 85 253 231 0 0 chrX_random 2593147 2593199 -6705807 + MER9 LTR ERVK 460 511 0 11288 147 35 6 chrX_random 2593199 2593944 -6705062 - L1P4 LINE L1 -703 6116 5394 369 0 0 0 chrX_random 2593944 2593985 -6705021 + (TTTA)n Simple_repeat Simple_repeat 3 43 0 2038 128 0 0 chrX_random 2593987 2594268 -6704738 - AluSq SINE Alu -32 281 1 11288 147 35 6 chrX_random 2594268 2595243 -6703763 - L1P4 LINE L1 -1425 5394 4317 198 0 0 0 chrX_random 2595243 2595265 -6703741 + (TTG)n Simple_repeat Simple_repeat 3 24 0 11288 147 35 6 chrX_random 2595265 2595655 -6703351 - L1P4 LINE L1 -2502 4317 3940 7535 209 40 32 chrX_random 2595652 2597264 -6701742 - L1P4 LINE L1 -5056 1738 106 * 4901 227 14 36 chrX_random 2597425 2598633 -6700373 - L1PA13 LINE L1 -5303 1484 237 12404 159 11 28 chrX_random 2598719 2600529 -6698477 - L1M1 LINE L1 -2128 4978 3140 4899 60 2 0 chrX_random 2600529 2601140 -6697866 + L1PA7 LINE L1 5534 6150 -4 12404 159 11 28 chrX_random 2601140 2601188 -6697818 - L1M1 LINE L1 -3966 3140 3093 1547 227 59 91 chrX_random 2601188 2601719 -6697287 + MLT2B3 LTR ERVL 1 514 -40 522 0 0 0 chrX_random 2601719 2601777 -6697229 + (TA)n Simple_repeat Simple_repeat 2 59 0 1547 227 59 91 chrX_random 2601777 2601817 -6697189 + MLT2B3 LTR ERVL 514 554 0 12404 159 11 28 chrX_random 2601817 2602956 -6696050 - L1M1 LINE L1 -4013 3093 1462 288 0 0 0 chrX_random 2603068 2603100 -6695906 + (TA)n Simple_repeat Simple_repeat 1 32 0 * 333 0 0 0 chrX_random 2603099 2603136 -6695870 + (GA)n Simple_repeat Simple_repeat 2 38 0 6940 62 21 0 chrX_random 2603156 2604461 -6694545 - L1PA8 LINE L1 -1 6171 4862 699 99 0 47 chrX_random 2604461 2604699 -6694307 + (TA)n Simple_repeat Simple_repeat 1 226 0 187 352 110 0 chrX_random 2604739 2604830 -6694176 + L2 LINE L2 3205 3305 -8 184 311 0 0 chrX_random 2605841 2605886 -6693120 - L2 LINE L2 -76 3196 3152 1452 174 43 64 chrX_random 2605941 2606308 -6692698 + L1MB1 LINE L1 5710 6060 -108 944 107 0 7 chrX_random 2606322 2606462 -6692544 + AluSg/x SINE Alu 163 301 -9 350 160 38 42 chrX_random 2606515 2606632 -6692374 + L1MB1 LINE L1 6050 6159 -9 242 292 36 36 chrX_random 2606647 2606784 -6692222 + MIR SINE MIR 83 219 -43 357 24 0 0 chrX_random 2606883 2606925 -6692081 + (CA)n Simple_repeat Simple_repeat 1 42 0 915 174 37 5 chrX_random 2607356 2607546 -6691460 + MLT2B1 LTR ERVL 1 196 -324 2372 62 31 0 chrX_random 2608857 2609148 -6689858 - AluSc SINE Alu -9 300 1 204 83 56 0 chrX_random 2609150 2609186 -6689820 + T-rich Low_complexity Low_complexity 4 41 0 541 273 59 68 chrX_random 2609503 2609942 -6689064 - MLT1J LTR MaLR -6 505 71 253 75 38 19 chrX_random 2609975 2610028 -6688978 + A-rich Low_complexity Low_complexity 2 55 0 885 142 0 0 chrX_random 2610160 2610287 -6688719 + AluSx SINE Alu 1 127 -186 251 89 178 0 chrX_random 2610290 2610335 -6688671 - MADE1 DNA Mariner -24 56 4 1107 157 22 0 chrX_random 2610335 2610513 -6688493 + AluSx SINE Alu 123 304 -8 2276 84 20 0 chrX_random 2610522 2610820 -6688186 + AluSp SINE Alu 1 304 -9 249 325 163 25 chrX_random 2611063 2611389 -6687617 - L1MDa LINE L1 -2277 4263 3893 21 57 0 0 chrX_random 2611436 2611471 -6687535 + AT_rich Low_complexity Low_complexity 1 35 0 308 282 101 0 chrX_random 2611511 2611660 -6687346 - L1MDa LINE L1 -2842 3698 3535 653 332 75 18 chrX_random 2611663 2612118 -6686888 - L1MDa LINE L1 -3304 3236 2756 1515 135 0 0 chrX_random 2612133 2612378 -6686628 - L1MA2 LINE L1 0 6304 6060 302 250 72 29 chrX_random 2612491 2612699 -6686307 - L1MDa LINE L1 -4029 2692 2476 613 287 42 76 chrX_random 2612966 2613613 -6685393 - L1MDa LINE L1 -4577 2144 1488 29 0 0 0 chrX_random 2613616 2613645 -6685361 + AT_rich Low_complexity Low_complexity 1 29 0 5834 117 28 22 chrX_random 2613645 2613873 -6685133 - L1MA3 LINE L1 0 7724 7499 1793 176 10 0 chrX_random 2613873 2614180 -6684826 - AluJb SINE Alu -2 310 1 5834 117 28 22 chrX_random 2614180 2614973 -6684033 - L1MA3 LINE L1 -225 7499 6697 * 10566 191 20 31 chrX_random 2614962 2615861 -6683145 - L1MA3 LINE L1 -1293 6272 5365 341 102 0 0 chrX_random 2615861 2615920 -6683086 - Alu SINE Alu 0 300 242 10566 191 20 31 chrX_random 2615920 2617414 -6681592 - L1MA3 LINE L1 -2200 5365 3848 2063 165 49 11 chrX_random 2617414 2617784 -6681222 + MSTA LTR MaLR 1 384 -44 7225 129 30 13 chrX_random 2617910 2619257 -6679749 - L1MA3 LINE L1 -3813 3752 2381 1223 189 13 8 chrX_random 2619275 2619513 -6679493 - L1ME LINE L1 -503 5663 5425 1201 165 36 0 chrX_random 2619560 2619808 -6679198 - L1MA5A LINE L1 -4 6293 6037 971 134 0 18 chrX_random 2619830 2620001 -6679005 - L1PA13 LINE L1 0 6163 5996 322 225 18 0 chrX_random 2620001 2620112 -6678894 + (TA)n Simple_repeat Simple_repeat 2 114 0 293 244 26 0 chrX_random 2620244 2620359 -6678647 + (TA)n Simple_repeat Simple_repeat 2 119 0 25 51 0 0 chrX_random 2620571 2620610 -6678396 + AT_rich Low_complexity Low_complexity 1 39 0 186 311 96 22 chrX_random 2621448 2621583 -6677423 - L2 LINE L2 -8 3305 3161 223 293 80 0 chrX_random 2622185 2622260 -6676746 - L2 LINE L2 -542 2772 2692 1542 210 68 28 chrX_random 2622324 2622415 -6676591 - L1MCa LINE L1 -3652 2774 2688 2627 141 105 32 chrX_random 2622415 2622941 -6676065 - LTR6A LTR ERV1 0 564 1 1542 210 68 28 chrX_random 2622941 2624086 -6674920 - L1MCa LINE L1 -3738 2688 323 2744 261 41 13 chrX_random 2624089 2624400 -6674606 + L1MC/D LINE L1 4019 4320 -1859 2110 113 27 10 chrX_random 2624400 2624701 -6674305 - AluSc SINE Alu -3 306 1 2744 261 41 13 chrX_random 2624701 2625733 -6673273 + L1MC/D LINE L1 4320 5436 -743 2215 200 26 79 chrX_random 2625734 2626313 -6672693 + MLT2B3 LTR ERVL 1 548 -6 864 177 12 0 chrX_random 2626317 2626481 -6672525 + L1MC/D LINE L1 5435 5600 -733 706 169 0 0 chrX_random 2626482 2626606 -6672400 + L1MC/D LINE L1 5695 5818 -526 9709 195 32 6 chrX_random 2626724 2628914 -6670092 + L1 LINE L1 2630 4877 -1269 5351 181 12 13 chrX_random 2628922 2629183 -6669823 + L1PB3 LINE L1 4137 4397 -1757 203 77 0 26 chrX_random 2629183 2629222 -6669784 + (TAAAA)n Simple_repeat Simple_repeat 2 39 0 5351 181 12 13 chrX_random 2629222 2629354 -6669652 + L1PB3 LINE L1 4397 4528 -1626 5194 57 21 37 chrX_random 2629354 2630053 -6668953 - LTR12 LTR ERV1 0 688 1 5351 181 12 13 chrX_random 2630053 2631673 -6667333 + L1PB3 LINE L1 4528 6148 -6 3837 249 66 55 chrX_random 2631657 2633522 -6665484 + L1M4 LINE L1 2466 4350 -1796 * 2118 258 101 23 chrX_random 2633877 2634613 -6664393 - L1M3e LINE L1 -6227 803 11 181 313 30 30 chrX_random 2634621 2634688 -6664318 - MIR SINE MIR -195 67 1 180 111 0 0 chrX_random 2636627 2636654 -6662352 + (TATG)n Simple_repeat Simple_repeat 2 28 0 6897 64 16 0 chrX_random 2636655 2637836 -6661170 - L1PA7 LINE L1 -11 6143 4954 14178 89 6 9 chrX_random 2637836 2639905 -6659101 + L1PA7 LINE L1 2881 4944 -1202 25 51 0 0 chrX_random 2640494 2640533 -6658473 + AT_rich Low_complexity Low_complexity 1 39 0 561 178 69 0 chrX_random 2641058 2641159 -6657847 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 4098 147 14 20 chrX_random 2641149 2641906 -6657100 + Tigger3(Golem) DNA MER2_type 2276 3028 -1 2128 125 0 0 chrX_random 2642958 2643254 -6655752 + AluSg SINE Alu 1 296 -14 1936 133 3 10 chrX_random 2644526 2644827 -6654179 - AluJb SINE Alu -13 299 1 2407 250 87 20 chrX_random 2647665 2648877 -6650129 - L1ME LINE L1 -704 5462 4165 25 0 0 0 chrX_random 2648977 2649002 -6650004 + AT_rich Low_complexity Low_complexity 1 25 0 220 250 36 131 chrX_random 2649191 2649359 -6649647 + MIR SINE MIR 108 259 -3 7340 44 0 0 chrX_random 2649574 2650579 -6648427 - L1PA5 LINE L1 -1 6153 5149 240 194 48 0 chrX_random 2650862 2650924 -6648082 + L1M4 LINE L1 5246 5310 -836 3238 203 106 75 chrX_random 2650952 2651474 -6647532 + L1MC3 LINE L1 6564 7068 -717 315 186 17 0 chrX_random 2651474 2651533 -6647473 + MLT1F1 LTR MaLR 35 94 -473 3238 203 106 75 chrX_random 2651533 2652137 -6646869 + L1MC3 LINE L1 7068 7785 0 180 0 0 0 chrX_random 2652568 2652588 -6646418 + (A)n Simple_repeat Simple_repeat 1 20 0 1802 164 81 9 chrX_random 2653146 2653494 -6645512 + MLT2C2 LTR ERVL 1 373 -91 344 163 62 25 chrX_random 2654510 2654590 -6644416 - L1PA16 LINE L1 0 6166 6084 462 276 0 0 chrX_random 2654671 2654769 -6644237 - Tigger7 DNA MER2_type -1 2486 2389 * 1216 220 68 0 chrX_random 2654767 2655017 -6643989 - Tigger7 DNA MER2_type -466 267 1 25 51 0 0 chrX_random 2656314 2656353 -6642653 + AT_rich Low_complexity Low_complexity 1 39 0 189 74 0 0 chrX_random 2656435 2656462 -6642544 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1768 170 4 0 chrX_random 2656468 2656744 -6642262 - AluJb SINE Alu -34 278 2 1831 169 7 10 chrX_random 2657808 2658110 -6640896 + AluJb SINE Alu 3 303 -9 599 340 0 0 chrX_random 2658277 2658433 -6640573 + L2 LINE L2 3117 3272 0 476 298 19 74 chrX_random 2658694 2659003 -6640003 - LTR16A LTR ERVL -140 310 19 1132 213 34 47 chrX_random 2659427 2659780 -6639226 + L1MC4 LINE L1 5938 6249 -110 249 254 0 0 chrX_random 2659781 2659844 -6639162 + L1MD1 LINE L1 6131 6193 -49 310 312 158 23 chrX_random 2660239 2660454 -6638552 - MIR SINE MIR 0 262 19 650 326 129 13 chrX_random 2662985 2663371 -6635635 - L3 LINE CR1 -78 1499 1069 1303 243 160 36 chrX_random 2664402 2664851 -6634155 - MLT1D LTR MaLR 0 505 1 1536 258 13 12 chrX_random 2665761 2666297 -6632709 + MLT2F LTR ERVL 3 584 -79 561 283 34 115 chrX_random 2666361 2666718 -6632288 + MLT1F-int LTR MaLR 1020 1347 -24 938 239 117 82 chrX_random 2666722 2667244 -6631762 + MLT1F LTR MaLR 3 542 0 1663 161 65 0 chrX_random 2667569 2667848 -6631158 + AluSx SINE Alu 1 297 -15 212 239 0 0 chrX_random 2667885 2667952 -6631054 + T-rich Low_complexity Low_complexity 1 67 0 8009 170 14 5 chrX_random 2667953 2670813 -6628193 - L1MA2 LINE L1 0 7723 4832 2384 138 5 8 chrX_random 2670813 2671189 -6627817 - THE1C LTR MaLR 0 375 1 8031 164 30 34 chrX_random 2671197 2672773 -6626233 - THE1C-int LTR MaLR -8 1572 3 2180 128 2 60 chrX_random 2672775 2673173 -6625833 - THE1C LTR MaLR 0 375 1 9893 171 44 7 chrX_random 2673173 2676114 -6622892 - L1MA2 LINE L1 -2729 4836 1784 22 35 0 0 chrX_random 2676164 2676193 -6622813 + AT_rich Low_complexity Low_complexity 1 29 0 180 0 0 0 chrX_random 2676551 2676571 -6622435 + (TTG)n Simple_repeat Simple_repeat 2 21 0 212 261 92 42 chrX_random 2677120 2677239 -6621767 - L3b LINE CR1 -149 1434 1310 387 0 0 0 chrX_random 2678093 2678136 -6620870 + (ATATG)n Simple_repeat Simple_repeat 2 44 0 26 0 0 0 chrX_random 2678581 2678607 -6620399 + AT_rich Low_complexity Low_complexity 1 26 0 815 168 56 25 chrX_random 2678760 2678957 -6620049 - MER3 DNA MER1_type -2 207 5 1028 314 63 56 chrX_random 2679297 2680248 -6618758 + L2 LINE L2 2336 3305 -8 626 245 42 10 chrX_random 2680469 2680661 -6618345 + LTR16B LTR ERVL 265 462 -2 2460 45 7 0 chrX_random 2680759 2681050 -6617956 - AluY SINE Alu -18 293 1 396 0 0 0 chrX_random 2681076 2681120 -6617886 + (TG)n Simple_repeat Simple_repeat 2 45 0 224 268 144 10 chrX_random 2682048 2682145 -6616861 - L2 LINE L2 0 3272 3163 1322 147 111 7 chrX_random 2682171 2682450 -6616556 + L1MA4 LINE L1 5986 6293 -7 2593 262 84 28 chrX_random 2684181 2685906 -6613100 - L1ME LINE L1 -1803 4277 2417 2210 211 24 9 chrX_random 2685906 2686366 -6612640 - MLT1C LTR MaLR 0 467 1 344 231 0 0 chrX_random 2686366 2686444 -6612562 - L1ME LINE L1 -3663 2417 2340 987 294 86 64 chrX_random 2686470 2686851 -6612155 - L1ME LINE L1 -4147 2114 1743 1357 193 43 55 chrX_random 2686851 2687198 -6611808 + MER2 DNA MER2_type 2 344 0 987 294 86 64 chrX_random 2687198 2687956 -6611050 - L1ME LINE L1 -4518 1743 860 2199 177 11 13 chrX_random 2687956 2688408 -6610598 - L1MA5 LINE L1 -6 6294 5844 987 294 86 64 chrX_random 2688408 2688748 -6610258 - L1ME LINE L1 -5401 860 529 310 305 42 91 chrX_random 2688827 2689158 -6609848 - L1ME LINE L1 -5695 375 61 574 245 27 7 chrX_random 2689334 2689481 -6609525 - MIR SINE MIR -74 188 39 2589 52 0 0 chrX_random 2689958 2690268 -6608738 - AluY SINE Alu -1 310 1 684 183 0 24 chrX_random 2690556 2690682 -6608324 + FLAM_C SINE Alu 1 123 -10 1377 171 43 7 chrX_random 2690814 2691095 -6607911 - L1MA7 LINE L1 -1 6290 6000 4794 233 69 62 chrX_random 2691106 2691261 -6607745 - L1MC4a LINE L1 -392 7416 7264 198 0 0 0 chrX_random 2691261 2691283 -6607723 + (TTTG)n Simple_repeat Simple_repeat 4 25 0 4794 233 69 62 chrX_random 2691283 2691868 -6607138 - L1MC4a LINE L1 -544 7264 6685 369 0 0 0 chrX_random 2691868 2691909 -6607097 + (TG)n Simple_repeat Simple_repeat 2 42 0 4794 233 69 62 chrX_random 2691909 2692614 -6606392 - L1MC4a LINE L1 -1123 6685 5986 468 0 0 0 chrX_random 2692614 2692666 -6606340 + (TC)n Simple_repeat Simple_repeat 2 53 0 333 0 0 0 chrX_random 2692665 2692702 -6606304 + (TA)n Simple_repeat Simple_repeat 1 37 0 * 4794 233 69 62 chrX_random 2692666 2693089 -6605917 - L1MC4a LINE L1 -1822 5986 5569 307 283 0 0 chrX_random 2693277 2693337 -6605669 + Tigger3(Golem) DNA MER2_type 1 60 -2969 774 151 36 0 chrX_random 2693340 2693479 -6605527 + Tigger3(Golem) DNA MER2_type 2530 2673 -356 218 200 89 0 chrX_random 2694965 2695010 -6603996 - L2 LINE L2 -12 3260 3212 758 136 0 8 chrX_random 2695109 2695234 -6603772 + L1MA2 LINE L1 6181 6304 0 8702 193 27 17 chrX_random 2695377 2697631 -6601375 + L1PA15 LINE L1 3380 5654 -511 2411 115 49 42 chrX_random 2697631 2698056 -6600950 + MSTA LTR MaLR 1 428 0 510 146 0 0 chrX_random 2698056 2698138 -6600868 + MSTA-int LTR MaLR 1 82 -1569 1268 189 50 44 chrX_random 2698273 2698570 -6600436 + MLT2B3 LTR ERVL 251 549 -5 3069 150 6 4 chrX_random 2698570 2699071 -6599935 + L1PA15 LINE L1 5646 6147 -18 1879 189 14 3 chrX_random 2699383 2699632 -6599374 + MER47A DNA MER2_type 4 260 -2063 2259 79 3 0 chrX_random 2699632 2699924 -6599082 + AluSx SINE Alu 1 293 -19 1879 189 14 3 chrX_random 2699924 2700033 -6598973 + MER47A DNA MER2_type 260 366 0 230 316 63 0 chrX_random 2700196 2700275 -6598731 - MIR SINE MIR -113 149 66 373 235 0 0 chrX_random 2700675 2700756 -6598250 + MIR SINE MIR 100 180 -82 882 277 55 42 chrX_random 2701796 2702181 -6596825 - MLT1H LTR MaLR -169 386 5 368 288 74 94 chrX_random 2702818 2702977 -6596029 - MLT1I LTR MaLR -10 399 238 1988 175 78 10 chrX_random 2702977 2703376 -6595630 - MSTB LTR MaLR 0 426 1 368 288 74 94 chrX_random 2703376 2703622 -6595384 - MLT1I LTR MaLR -171 238 2 180 416 26 0 chrX_random 2706225 2706302 -6592704 - L2 LINE L2 -17 3255 3177 959 245 44 44 chrX_random 2707194 2707557 -6591449 + LTR37A LTR ERV1 26 388 -38 3691 165 95 29 chrX_random 2708388 2709298 -6589708 - MER11C LTR ERVK -4 1067 1 22 35 0 0 chrX_random 2709581 2709610 -6589396 + AT_rich Low_complexity Low_complexity 1 29 0 212 260 0 0 chrX_random 2710632 2710682 -6588324 + (CATA)n Simple_repeat Simple_repeat 1 50 0 531 232 38 81 chrX_random 2710891 2711002 -6588004 - L1ME2 LINE L1 0 6164 6065 2159 208 51 35 chrX_random 2711002 2711626 -6587380 + MER92B LTR ERV1 1 634 -2 531 232 38 81 chrX_random 2711626 2711725 -6587281 - L1ME2 LINE L1 -99 6065 5963 345 216 11 68 chrX_random 2711840 2711928 -6587078 - MER20 DNA MER1_type -16 203 121 203 119 34 68 chrX_random 2712315 2712374 -6586632 + (TTTA)n Simple_repeat Simple_repeat 1 57 0 348 80 0 0 chrX_random 2712375 2712425 -6586581 - L1PA10 LINE L1 -4 6164 6115 413 286 70 9 chrX_random 2713742 2713969 -6585037 - MER114 LTR ERV -46 602 362 4507 184 21 25 chrX_random 2713970 2715319 -6583687 - L1PB4 LINE L1 -23 6133 4784 202 100 0 0 chrX_random 2716991 2717021 -6581985 + L2 LINE L2 3284 3313 0 456 273 91 92 chrX_random 2717347 2717646 -6581360 - MLT1G3 LTR MaLR -247 308 4 257 326 71 0 chrX_random 2717747 2717845 -6581161 - MIR3 SINE MIR -46 162 58 23 33 0 0 chrX_random 2720734 2720764 -6578242 + AT_rich Low_complexity Low_complexity 1 30 0 399 341 80 0 chrX_random 2721057 2721283 -6577723 - MLT1L LTR MaLR -229 386 143 2140 138 0 0 chrX_random 2722421 2722725 -6576281 + AluSx SINE Alu 1 304 -8 576 112 34 0 chrX_random 2723595 2723684 -6575322 + MER34B LTR ERV1 303 394 -171 * 690 128 37 0 chrX_random 2723682 2723791 -6575215 - MER34B LTR ERV1 -452 113 1 327 113 0 0 chrX_random 2724127 2724180 -6574826 + (CAA)n Simple_repeat Simple_repeat 2 54 0 292 256 364 11 chrX_random 2724613 2724789 -6574217 - MIR SINE MIR 0 262 25 545 269 51 30 chrX_random 2725225 2725422 -6573584 + MLT1I LTR MaLR 37 237 -172 437 256 0 50 chrX_random 2725682 2725803 -6573203 + L2 LINE L2 3193 3307 -6 31 68 0 0 chrX_random 2726178 2726237 -6572769 + AT_rich Low_complexity Low_complexity 1 59 0 788 287 94 4 chrX_random 2727158 2727412 -6571594 - LTR16A LTR ERVL -2 448 172 501 248 90 110 chrX_random 2727713 2728249 -6570757 - L1MC4a LINE L1 -1971 5837 5313 273 264 0 11 chrX_random 2728500 2728587 -6570419 - LTR33A LTR ERVL -9 514 429 261 352 24 8 chrX_random 2729347 2729472 -6569534 + MIR3 SINE MIR 82 208 0 360 310 19 26 chrX_random 2729585 2729740 -6569266 - MER5A DNA MER1_type -1 188 35 285 313 73 40 chrX_random 2729607 2729757 -6569249 + MER5A DNA MER1_type 35 189 0 * 821 180 0 64 chrX_random 2730077 2730249 -6568757 + FRAM SINE Alu 1 161 -5 32 43 0 0 chrX_random 2730747 2730793 -6568213 + AT_rich Low_complexity Low_complexity 1 46 0 211 303 49 49 chrX_random 2731104 2731226 -6567780 + L2 LINE L2 1967 2088 -1226 1771 259 99 20 chrX_random 2731236 2731781 -6567225 - MLT1E LTR MaLR -5 588 1 383 315 95 25 chrX_random 2732125 2732535 -6566471 + L1MC/D LINE L1 4192 4631 -1515 1416 174 37 4 chrX_random 2732625 2732898 -6566108 + AluJb SINE Alu 35 315 0 376 257 19 9 chrX_random 2733299 2733404 -6565602 + L1MC/D LINE L1 5419 5524 -2284 226 288 0 0 chrX_random 2733409 2733468 -6565538 - Tigger5 DNA MER2_type 0 2323 2265 * 291 220 0 0 chrX_random 2733422 2733472 -6565534 + Tigger5 DNA MER2_type 2271 2320 -3 * 361 238 0 25 chrX_random 2733472 2733551 -6565455 - Tigger5 DNA MER2_type -2245 78 2 250 314 13 65 chrX_random 2733738 2733891 -6565115 + L2 LINE L2 2915 3059 -213 381 227 21 21 chrX_random 2734290 2734387 -6564619 - LTR65 LTR ERV1 -6 663 567 314 310 78 0 chrX_random 2734486 2734628 -6564378 - LTR65 LTR ERV1 -499 170 18 232 353 91 21 chrX_random 2734734 2734921 -6564085 + MIR SINE MIR 47 246 -16 377 296 10 0 chrX_random 2735590 2735688 -6563318 - L2 LINE L2 -14 3299 3201 320 328 76 25 chrX_random 2736649 2736847 -6562159 + HAL1 LINE L1 1106 1313 -1194 248 244 47 71 chrX_random 2736930 2737057 -6561949 + HAL1b LINE L1 286 409 -939 228 200 46 15 chrX_random 2737537 2737602 -6561404 + L1PA8A LINE L1 5673 5739 -392 234 312 43 14 chrX_random 2737606 2737744 -6561262 + L1MC/D LINE L1 5765 5906 -1902 195 351 113 9 chrX_random 2738197 2738419 -6560587 - MIR SINE MIR -15 247 3 2013 94 0 4 chrX_random 2738816 2739093 -6559913 + AluSx SINE Alu 1 276 -36 197 33 33 0 chrX_random 2739104 2739134 -6559872 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 1043 196 15 53 chrX_random 2739396 2739662 -6559344 - L1MA10 LINE L1 -124 6210 5955 2148 158 7 22 chrX_random 2739860 2740264 -6558742 + L1MA7 LINE L1 5894 6291 0 740 294 35 59 chrX_random 2740644 2741066 -6557940 + MER90 LTR ERV1 148 559 -16 23 0 0 0 chrX_random 2741078 2741101 -6557905 + AT_rich Low_complexity Low_complexity 1 23 0 363 250 42 0 chrX_random 2742734 2742830 -6556176 - MLT1I LTR MaLR 0 409 310 492 234 90 14 chrX_random 2742969 2743114 -6555892 - MLT1I LTR MaLR -253 156 1 322 326 69 7 chrX_random 2744057 2744201 -6554805 - L1M4 LINE L1 -2250 3896 3744 26 30 0 0 chrX_random 2745213 2745246 -6553760 + AT_rich Low_complexity Low_complexity 1 33 0 268 367 72 34 chrX_random 2746261 2746525 -6552481 + L2 LINE L2 2596 2869 -445 398 265 83 4 chrX_random 2746602 2746739 -6552267 - L1MC4 LINE L1 -852 7026 6814 293 675 0 0 chrX_random 2746917 2747068 -6551938 + A-rich Low_complexity Low_complexity 1 151 0 211 361 128 15 chrX_random 2747236 2747510 -6551496 + L2 LINE L2 2483 2787 -527 186 43 0 0 chrX_random 2748083 2748106 -6550900 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 3615 222 9 1 chrX_random 2748112 2748919 -6550087 + L1 LINE L1 2213 3025 -3121 1426 114 0 64 chrX_random 2748919 2749139 -6549867 - AluSc SINE Alu -83 226 21 23 54 0 0 chrX_random 2750376 2750413 -6548593 + AT_rich Low_complexity Low_complexity 1 37 0 1525 198 13 29 chrX_random 2750609 2750923 -6548083 + AluJo SINE Alu 2 310 -2 180 77 0 0 chrX_random 2751241 2751267 -6547739 + (CTATT)n Simple_repeat Simple_repeat 3 28 0 290 258 40 16 chrX_random 2751731 2751855 -6547151 - L1ME LINE L1 -387 5775 5649 697 226 16 37 chrX_random 2751860 2752050 -6546956 + MER3 DNA MER1_type 10 195 -14 348 325 39 55 chrX_random 2752726 2753037 -6545969 + ERVL LTR ERVL 1014 1319 -4445 4015 206 51 96 chrX_random 2753115 2754117 -6544889 - Tigger3b DNA MER2_type -1 1230 274 531 208 10 0 chrX_random 2754115 2754216 -6544790 - Tigger3b DNA MER2_type -1129 102 1 * 270 330 89 11 chrX_random 2754224 2754415 -6544591 + ERVL LTR ERVL 1265 1470 -4015 582 327 67 14 chrX_random 2754503 2754957 -6544049 + ERVL LTR ERVL 1654 2135 -3350 556 314 80 33 chrX_random 2754989 2755498 -6543508 + ERVL LTR ERVL 2252 2772 -2713 670 301 67 51 chrX_random 2755533 2756058 -6542948 + ERVL LTR ERVL 4995 5527 -237 184 115 0 0 chrX_random 2757414 2757440 -6541566 - MER5A DNA MER1_type -118 71 46 180 0 0 0 chrX_random 2758156 2758176 -6540830 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 186 284 49 49 chrX_random 2758216 2758297 -6540709 - MIR SINE MIR -110 152 72 367 306 18 9 chrX_random 2759674 2759785 -6539221 + MLT1L LTR MaLR 164 275 -340 991 184 92 38 chrX_random 2759797 2760036 -6538970 - AluJo SINE Alu -19 293 42 467 248 0 45 chrX_random 2760330 2760463 -6538543 - L2 LINE L2 0 3313 3187 325 262 19 48 chrX_random 2760679 2760782 -6538224 + LTR16C LTR ERVL 153 252 -239 645 231 26 19 chrX_random 2760816 2760972 -6538034 + LTR16C LTR ERVL 333 489 -2 203 260 0 0 chrX_random 2761091 2761141 -6537865 + CT-rich Low_complexity Low_complexity 1 50 0 186 43 0 0 chrX_random 2761436 2761459 -6537547 + (TTTTTA)n Simple_repeat Simple_repeat 1 23 0 461 337 51 39 chrX_random 2764299 2764655 -6534351 - MLT1I LTR MaLR -49 360 1 236 311 0 14 chrX_random 2765153 2765227 -6533779 - MIR SINE MIR -18 244 172 1709 151 0 4 chrX_random 2766670 2766922 -6532084 + AluSq SINE Alu 1 251 -62 371 308 34 0 chrX_random 2767042 2767159 -6531847 + MIR SINE MIR 114 234 -28 2543 105 16 8 chrX_random 2767186 2767558 -6531448 + THE1C LTR MaLR 1 375 0 9714 124 31 24 chrX_random 2767558 2769127 -6529879 + THE1C-int LTR MaLR 1 1580 0 2684 103 3 11 chrX_random 2769127 2769505 -6529501 + THE1C LTR MaLR 1 375 0 424 345 30 20 chrX_random 2771599 2771802 -6527204 - MIR SINE MIR -12 250 46 443 322 99 19 chrX_random 2771969 2772292 -6526714 + LTR33A LTR ERVL 151 499 -24 24 32 0 0 chrX_random 2772314 2772345 -6526661 + AT_rich Low_complexity Low_complexity 1 31 0 2367 174 47 41 chrX_random 2772582 2773093 -6525913 - MER67D LTR ERV1 0 514 1 182 270 95 27 chrX_random 2773752 2773826 -6525180 - MIR SINE MIR -114 94 16 24 53 0 0 chrX_random 2774442 2774480 -6524526 + AT_rich Low_complexity Low_complexity 1 38 0 2356 59 0 7 chrX_random 2775028 2775369 -6523637 - AluY SINE Alu 0 339 1 445 349 54 15 chrX_random 2775808 2776069 -6522937 - L2 LINE L2 -779 2535 2265 2381 205 47 2 chrX_random 2776078 2776431 -6522575 + MER6 DNA MER2_type 1 382 -483 225 0 0 0 chrX_random 2776431 2776456 -6522550 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 2381 205 47 2 chrX_random 2776456 2776570 -6522436 + MER6 DNA MER2_type 382 489 -376 1106 319 72 60 chrX_random 2777281 2777923 -6521083 - ERVL LTR ERVL -2883 2881 2221 3432 187 9 34 chrX_random 2777923 2778681 -6520325 - L1MB3 LINE L1 -1 6182 5444 1106 319 72 60 chrX_random 2778681 2779027 -6519979 - ERVL LTR ERVL -3543 2221 1881 2358 95 0 0 chrX_random 2779034 2779338 -6519668 - AluSg1 SINE Alu -5 304 1 762 104 0 0 chrX_random 2779339 2779445 -6519561 - MER61E LTR ERV1 -123 446 341 362 208 37 59 chrX_random 2779497 2779615 -6519391 - MER61E LTR ERV1 -380 189 89 604 162 19 20 chrX_random 2779618 2779759 -6519247 - LTR25 LTR ERV1 -438 356 103 414 182 0 132 chrX_random 2779750 2779871 -6519135 - MER61E LTR ERV1 -462 107 3 * 366 322 62 22 chrX_random 2780824 2780932 -6518074 - LTR33A LTR ERVL -236 287 185 1793 148 10 23 chrX_random 2780932 2781237 -6517769 + AluJo SINE Alu 1 301 -11 366 322 62 22 chrX_random 2781237 2781355 -6517651 - LTR33A LTR ERVL -338 185 52 340 364 105 34 chrX_random 2781560 2782121 -6516885 + L2 LINE L2 987 1587 -1727 22 0 0 0 chrX_random 2782127 2782149 -6516857 + AT_rich Low_complexity Low_complexity 1 22 0 2181 116 3 25 chrX_random 2783043 2783363 -6515643 - AluSp SINE Alu 0 313 1 616 199 58 12 chrX_random 2783433 2783604 -6515402 + L1M4 LINE L1 5121 5299 -847 206 244 0 0 chrX_random 2783666 2783711 -6515295 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 742 326 63 66 chrX_random 2785512 2786253 -6512753 - L2 LINE L2 -57 3256 2508 339 25 0 0 chrX_random 2786286 2786326 -6512680 + (TG)n Simple_repeat Simple_repeat 1 40 0 360 0 0 0 chrX_random 2786426 2786466 -6512540 + (TG)n Simple_repeat Simple_repeat 2 41 0 2498 43 40 0 chrX_random 2786580 2786879 -6512127 + AluY SINE Alu 1 311 0 339 113 0 0 chrX_random 2787000 2787053 -6511953 + (A)n Simple_repeat Simple_repeat 1 53 0 510 90 0 0 chrX_random 2787152 2787219 -6511787 - Alu SINE Alu -19 293 227 236 340 47 9 chrX_random 2787233 2787339 -6511667 + MIR3 SINE MIR 93 202 -6 269 285 49 21 chrX_random 2788607 2788751 -6510255 - L1M4 LINE L1 -325 5853 5706 288 333 54 24 chrX_random 2788949 2789358 -6509648 - L1M4 LINE L1 -977 5169 4749 1564 180 0 22 chrX_random 2789467 2789745 -6509261 + MLT2D LTR ERVL 20 291 -123 1016 202 26 13 chrX_random 2789745 2789973 -6509033 - L1M4 LINE L1 -1208 4938 4708 23 0 0 0 chrX_random 2789990 2790013 -6508993 + AT_rich Low_complexity Low_complexity 1 23 0 325 256 80 15 chrX_random 2790247 2790384 -6508622 + L1MEc LINE L1 2069 2214 -4182 269 270 60 0 chrX_random 2790401 2790501 -6508505 + L1MEc LINE L1 2202 2307 -3910 444 304 89 28 chrX_random 2790505 2791144 -6507862 + L1MEc LINE L1 3171 3848 -2367 888 58 25 0 chrX_random 2791379 2791499 -6507507 - L1P3 LINE L1 -497 5675 5553 * 2180 43 7 0 chrX_random 2791494 2791773 -6507233 + L1P3 LINE L1 5254 5534 -620 21301 45 48 3 chrX_random 2792099 2794818 -6504188 + L1P LINE L1 1 2841 -3305 477 300 57 10 chrX_random 2794918 2795215 -6503791 + L1MEc LINE L1 4194 4504 -1711 572 314 80 42 chrX_random 2795299 2795824 -6503182 + L1MEc LINE L1 4882 5426 -789 938 47 86 0 chrX_random 2795983 2796111 -6502895 + MER85 DNA T2_type 1 139 0 2194 85 4 0 chrX_random 2796344 2796625 -6502381 + AluSx SINE Alu 1 282 -30 3836 166 43 6 chrX_random 2797708 2798745 -6500261 + L1P4 LINE L1 4493 5560 -606 8926 28 4 3 chrX_random 2798848 2799927 -6499079 + L1PA2 LINE L1 3766 4845 -1301 5639 76 4 10 chrX_random 2799942 2800801 -6498205 + L1PA2 LINE L1 5254 6106 -48 1439 104 9 0 chrX_random 2800828 2801049 -6497957 + L1MA2 LINE L1 6082 6304 0 3917 125 8 9 chrX_random 2801116 2801750 -6497256 + L1PB2 LINE L1 5516 6148 -3 2521 42 3 10 chrX_random 2803493 2803804 -6495202 - AluY SINE Alu -2 309 1 1333 94 40 0 chrX_random 2804462 2804663 -6494343 - L1PA10 LINE L1 -9 6159 5951 2186 77 70 6 chrX_random 2804663 2805029 -6493977 + LTR7 LTR ERV1 1 450 0 630 85 32 0 chrX_random 2805029 2805123 -6493883 - L1PA10 LINE L1 -213 5955 5859 2118 104 11 0 chrX_random 2805230 2805517 -6493489 - AluSc SINE Alu -19 290 1 21 36 0 0 chrX_random 2805577 2805605 -6493401 + AT_rich Low_complexity Low_complexity 1 28 0 1200 164 0 20 chrX_random 2805916 2806111 -6492895 + Tigger4(Zombi) DNA MER2_type 1 191 -2540 * 3862 147 30 3 chrX_random 2806094 2806760 -6492246 + Tigger4(Zombi) DNA MER2_type 2048 2731 0 1274 233 58 16 chrX_random 2807519 2807949 -6491057 - L1MEc LINE L1 -5286 1110 663 22 56 0 0 chrX_random 2807978 2808014 -6490992 + AT_rich Low_complexity Low_complexity 1 36 0 1215 79 6 190 chrX_random 3208175 3208313 -6090693 + MER4A LTR ERV1 312 447 -296 1861 140 3 0 chrX_random 3208313 3208606 -6090400 + AluSx SINE Alu 1 294 -18 1215 79 6 190 chrX_random 3208606 3208730 -6090276 + MER4A LTR ERV1 447 592 -151 998 105 6 93 chrX_random 3208766 3208879 -6090127 + MER4B LTR ERV1 451 546 -64 1460 113 0 9 chrX_random 3208879 3209100 -6089906 + AluSg/x SINE Alu 83 301 -9 998 105 6 93 chrX_random 3209100 3209158 -6089848 + MER4B LTR ERV1 546 607 -3 1068 129 0 0 chrX_random 3209158 3209313 -6089693 + LTR26B LTR ERV1 48 202 -329 805 111 16 8 chrX_random 3209318 3209444 -6089562 + AluSq/x SINE Alu 1 127 -186 27 29 0 0 chrX_random 3209726 3209760 -6089246 + AT_rich Low_complexity Low_complexity 1 34 0 8643 24 0 2 chrX_random 3210017 3211789 -6087217 - L1PA2 LINE L1 -1 6154 4382 34692 37 34 2 chrX_random 3211889 3216122 -6082884 - L1PA2 LINE L1 -1774 4372 4 226 207 11 69 chrX_random 3216363 3216537 -6082469 + (TATAA)n Simple_repeat Simple_repeat 1 164 0 23 33 0 0 chrX_random 3216935 3216965 -6082041 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chrX_random 3217335 3217361 -6081645 + AT_rich Low_complexity Low_complexity 1 26 0 332 192 0 0 chrX_random 3217440 3217513 -6081493 - L1MC4 LINE L1 -505 7817 7745 704 74 11 0 chrX_random 3217571 3217666 -6081340 - AluY SINE Alu -6 305 210 2140 99 0 7 chrX_random 3217803 3218097 -6080909 - AluSq SINE Alu -21 292 1 312 371 29 0 chrX_random 3218880 3219020 -6079986 + L1 LINE L1 3466 3609 -2537 274 319 0 9 chrX_random 3219038 3219154 -6079852 - L1M4 LINE L1 -2400 3746 3632 2046 112 0 13 chrX_random 3219193 3219506 -6079500 + AluSc SINE Alu 1 309 0 2075 58 0 0 chrX_random 3219512 3219770 -6079236 + L1PA8 LINE L1 5915 6172 0 310 227 31 17 chrX_random 3220599 3220702 -6078304 - L1MC4 LINE L1 -1324 6998 2006 331 250 7 26 chrX_random 3220711 3220825 -6078181 - L1MC4 LINE L1 -1339 6983 1995 442 187 0 32 chrX_random 3220825 3220948 -6078058 + (CATA)n Simple_repeat Simple_repeat 4 122 0 386 258 8 47 chrX_random 3220948 3221100 -6077906 - L1MC4 LINE L1 -1339 6983 1995 322 221 0 15 chrX_random 3221092 3221160 -6077846 - L1MC4 LINE L1 -4365 2061 1995 * 354 279 47 0 chrX_random 3221156 3221242 -6077764 - L1MC4 LINE L1 -1339 6703 6614 347 330 0 0 chrX_random 3221170 3221261 -6077745 + L1MC4 LINE L1 6614 6704 -1338 * 1729 171 55 9 chrX_random 3221268 3221596 -6077410 - MER2 DNA MER2_type -1 343 1 771 84 45 0 chrX_random 3221697 3221903 -6077103 + (TAGA)n Simple_repeat Simple_repeat 1 215 0 843 56 39 34 chrX_random 3221924 3222103 -6076903 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 897 129 50 4 chrX_random 3222800 3223560 -6075446 + (TCTA)n Simple_repeat Simple_repeat 1 794 0 730 209 40 20 chrX_random 3223645 3223793 -6075213 + MER2 DNA MER2_type 1 151 -194 2074 103 7 0 chrX_random 3224580 3224870 -6074136 - AluSx SINE Alu -20 292 1 2237 92 0 0 chrX_random 3225220 3225515 -6073491 - AluSx SINE Alu -17 295 1 741 212 41 0 chrX_random 3226254 3226400 -6072606 - AluJb SINE Alu -27 285 134 2089 114 0 3 chrX_random 3226414 3226720 -6072286 - AluY SINE Alu -6 305 1 189 0 0 0 chrX_random 3227157 3227178 -6071828 + (TG)n Simple_repeat Simple_repeat 2 22 0 225 175 0 53 chrX_random 3227226 3227283 -6071723 + L1MC4 LINE L1 6653 6706 -1336 2184 103 7 3 chrX_random 3227408 3227718 -6071288 - AluSx SINE Alu -1 311 1 513 174 0 0 chrX_random 3227723 3227821 -6071185 + CT-rich Low_complexity Low_complexity 2 99 0 1404 166 6 72 chrX_random 3227839 3228158 -6070848 - AluJo SINE Alu -14 298 1 541 185 7 15 chrX_random 3228301 3228436 -6070570 + CT-rich Low_complexity Low_complexity 1 134 0 2188 104 0 0 chrX_random 3228447 3228745 -6070261 - AluSx SINE Alu -14 298 1 1619 173 55 20 chrX_random 3228791 3229138 -6069868 - MER89 LTR ERV1 0 559 201 420 188 12 24 chrX_random 3229196 3229281 -6069725 + MER58A DNA MER1_type 33 116 0 1064 162 0 0 chrX_random 3229300 3229485 -6069521 - AluJb SINE Alu -9 303 119 2258 85 0 7 chrX_random 3230213 3230520 -6068486 + AluSc SINE Alu 1 305 -4 1833 114 11 0 chrX_random 3230531 3230802 -6068204 + AluSp SINE Alu 26 299 -14 802 67 9 0 chrX_random 3230812 3230917 -6068089 - L1PA8 LINE L1 -401 5771 5666 * 2884 59 0 61 chrX_random 3230905 3230968 -6068038 + L1PA8 LINE L1 5767 5832 -340 2256 87 0 25 chrX_random 3230968 3231289 -6067717 + AluSq SINE Alu 1 313 0 2884 59 0 61 chrX_random 3231289 3231633 -6067373 + L1PA8 LINE L1 5832 6149 -23 1992 69 11 36 chrX_random 3231633 3231909 -6067097 + AluSc SINE Alu 28 296 -13 505 153 42 36 chrX_random 3232157 3232545 -6066461 + (TCTA)n Simple_repeat Simple_repeat 1 390 0 347 159 22 50 chrX_random 3232606 3232788 -6066218 + (TCTA)n Simple_repeat Simple_repeat 1 177 0 2424 62 3 0 chrX_random 3233639 3233945 -6065061 - AluY SINE Alu -4 307 1 234 0 0 0 chrX_random 3234122 3234148 -6064858 + (ATTG)n Simple_repeat Simple_repeat 3 28 0 2084 104 7 0 chrX_random 3234206 3234494 -6064512 + AluY SINE Alu 1 290 -21 267 31 0 0 chrX_random 3234494 3234526 -6064480 + (TA)n Simple_repeat Simple_repeat 2 33 0 657 222 19 53 chrX_random 3234688 3234895 -6064111 - MLT2B1 LTR ERVL -97 423 224 899 139 5 18 chrX_random 3235606 3235830 -6063176 + (TTCC)n Simple_repeat Simple_repeat 1 220 0 1848 113 0 32 chrX_random 3235833 3236116 -6062890 - AluSx SINE Alu -38 274 1 708 201 5 7 chrX_random 3236482 3236661 -6062345 - MLT2B1 LTR ERVL -97 423 269 2136 132 77 3 chrX_random 3237041 3237406 -6061600 - L1PA14 LINE L1 -1 6160 5769 3582 84 0 0 chrX_random 3237421 3237896 -6061110 - L1PA5 LINE L1 -3 6151 5677 1338 137 5 0 chrX_random 3237920 3238124 -6060882 - AluSc SINE Alu -67 242 38 588 108 10 3 chrX_random 3238138 3238239 -6060767 - L1PA5 LINE L1 -472 5689 5591 2081 115 0 0 chrX_random 3238308 3238612 -6060394 + AluSc SINE Alu 1 304 -5 1132 179 26 13 chrX_random 3238615 3238844 -6060162 + L1MC1 LINE L1 5760 5991 -342 627 158 34 9 chrX_random 3239121 3239563 -6059443 + (TAGA)n Simple_repeat Simple_repeat 1 453 0 591 154 34 14 chrX_random 3239609 3239904 -6059102 + (TAGA)n Simple_repeat Simple_repeat 1 301 0 216 111 0 0 chrX_random 3239940 3239976 -6059030 + (TCCA)n Simple_repeat Simple_repeat 3 38 0 1876 189 24 3 chrX_random 3239989 3240327 -6058679 + MER7A DNA MER2_type 2 344 -2 204 146 0 24 chrX_random 3240359 3240400 -6058606 + (TCTA)n Simple_repeat Simple_repeat 3 42 0 647 171 0 43 chrX_random 3240400 3240587 -6058419 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 244 197 33 0 chrX_random 3240600 3240661 -6058345 + (TCTA)n Simple_repeat Simple_repeat 1 63 0 291 203 0 0 chrX_random 3240661 3240730 -6058276 + (TCCA)n Simple_repeat Simple_repeat 1 69 0 228 35 0 0 chrX_random 3240806 3240835 -6058171 + (TATG)n Simple_repeat Simple_repeat 4 32 0 183 162 0 0 chrX_random 3240839 3240876 -6058130 + (TCCA)n Simple_repeat Simple_repeat 1 37 0 961 237 134 56 chrX_random 3241226 3241622 -6057384 + MLT1D LTR MaLR 21 447 -58 1535 170 20 27 chrX_random 3241629 3241929 -6057077 - AluSq SINE Alu -15 298 1 912 100 0 27 chrX_random 3241929 3242079 -6056927 - MER4E LTR ERV1 -404 474 241 244 246 0 18 chrX_random 3242083 3242140 -6056866 - MLT2B1 LTR ERVL -123 397 342 * 555 195 1 14 chrX_random 3242109 3242249 -6056757 - MLT2B1 LTR ERVL -123 397 269 3317 24 0 0 chrX_random 3242257 3242633 -6056373 - L1PA4 LINE L1 -453 5702 5327 3842 31 9 2 chrX_random 3242633 3243089 -6055917 + L1PA4 LINE L1 5693 6152 -3 1371 56 42 70 chrX_random 3243089 3243303 -6055703 - MER4E LTR ERV1 -558 208 1 351 274 0 0 chrX_random 3243366 3243461 -6055545 + LTR16A1 LTR ERVL 61 155 -302 1095 104 7 0 chrX_random 3243780 3243934 -6055072 - AluSg/x SINE Alu -1 309 155 1861 114 8 0 chrX_random 3243934 3244221 -6054785 + AluSx SINE Alu 20 308 0 321 251 66 120 chrX_random 3244250 3244417 -6054589 + L1M2 LINE L1 2408 2565 -4284 233 139 0 0 chrX_random 3244427 3244463 -6054543 - MER4A LTR ERV1 0 664 629 2160 90 0 7 chrX_random 3244463 3244762 -6054244 - AluY SINE Alu -14 297 1 990 111 0 7 chrX_random 3244878 3245022 -6053984 + AluSc SINE Alu 1 143 -166 2070 103 10 0 chrX_random 3245022 3245314 -6053692 + AluSg SINE Alu 1 295 -15 3692 49 0 0 chrX_random 3245747 3246195 -6052811 + L1PA7 LINE L1 5707 6154 0 1882 129 0 14 chrX_random 3246212 3246506 -6052500 + AluSx SINE Alu 1 290 -22 299 190 86 141 chrX_random 3246708 3246795 -6052211 + MLT1E2 LTR MaLR 13 88 -538 2292 86 3 0 chrX_random 3246795 3247097 -6051909 + AluSg SINE Alu 1 303 -7 299 190 86 141 chrX_random 3247097 3247172 -6051834 + MLT1E2 LTR MaLR 88 166 -460 1629 97 8 4 chrX_random 3247200 3247438 -6051568 - AluSx SINE Alu -13 299 61 1458 116 5 0 chrX_random 3247719 3247934 -6051072 - AluSg/x SINE Alu -24 286 71 2149 77 17 0 chrX_random 3247934 3248229 -6050777 - AluY SINE Alu -9 302 1 996 98 0 0 chrX_random 3248232 3248365 -6050641 - AluSq/x SINE Alu -180 133 1 2187 97 10 0 chrX_random 3248558 3248858 -6050148 - AluSx SINE Alu -9 303 1 2043 115 0 0 chrX_random 3248953 3249249 -6049757 + AluSx SINE Alu 1 296 -16 2148 79 6 35 chrX_random 3249486 3249801 -6049205 - AluSg SINE Alu -4 306 1 2227 112 0 0 chrX_random 3250295 3250608 -6048398 - AluSq SINE Alu 0 313 1 728 180 4 21 chrX_random 3250789 3251023 -6047983 + CT-rich Low_complexity Low_complexity 1 230 0 207 67 33 0 chrX_random 3251522 3251552 -6047454 + (CCCCCT)n Simple_repeat Simple_repeat 5 35 0 723 188 5 29 chrX_random 3251558 3252002 -6047004 + CT-rich Low_complexity Low_complexity 1 433 0 1762 148 0 14 chrX_random 3252002 3252293 -6046713 - AluJo SINE Alu -25 287 1 756 170 61 14 chrX_random 3252293 3252440 -6046566 - LTR39 LTR ERV1 -629 154 1 1371 168 18 60 chrX_random 3252626 3252706 -6046300 + LTR39 LTR ERV1 285 367 -416 2436 55 0 3 chrX_random 3252706 3253013 -6045993 + AluY SINE Alu 1 306 -5 1371 168 18 60 chrX_random 3253013 3253217 -6045789 + LTR39 LTR ERV1 367 557 -226 3660 141 115 81 chrX_random 3253217 3253378 -6045628 - MER4D LTR ERV1 0 872 718 2155 110 3 0 chrX_random 3253378 3253688 -6045318 - AluY SINE Alu 0 311 1 3660 141 115 81 chrX_random 3253688 3253826 -6045180 - MER4D LTR ERV1 -154 718 586 1887 153 0 16 chrX_random 3253826 3254133 -6044873 + AluSx SINE Alu 1 302 -10 3660 141 115 81 chrX_random 3254133 3254647 -6044359 - MER4D LTR ERV1 -286 586 30 2233 79 3 32 chrX_random 3254663 3254979 -6044027 - AluSg SINE Alu -3 307 1 1253 72 12 0 chrX_random 3254980 3255147 -6043859 - AluSx SINE Alu -143 169 1 1668 159 7 14 chrX_random 3255156 3255172 -6043834 - AluJb SINE Alu -19 293 278 306 0 0 0 chrX_random 3255172 3255206 -6043800 + (TG)n Simple_repeat Simple_repeat 1 34 0 1668 159 7 14 chrX_random 3255206 3255484 -6043522 - AluJb SINE Alu -34 278 1 1895 137 0 11 chrX_random 3255517 3255802 -6043204 - AluSx SINE Alu -30 282 1 216 0 0 0 chrX_random 3255820 3255844 -6043162 + (TG)n Simple_repeat Simple_repeat 1 24 0 2003 120 0 10 chrX_random 3255844 3256128 -6042878 - AluSx SINE Alu -29 283 1 2019 105 0 11 chrX_random 3256162 3256448 -6042558 - AluSx SINE Alu -29 283 1 1804 139 0 11 chrX_random 3256487 3256767 -6042239 - AluSx SINE Alu -35 277 1 1840 104 4 25 chrX_random 3256802 3257080 -6041926 - AluSx SINE Alu -35 277 6 1986 87 29 45 chrX_random 3257313 3257625 -6041381 + AluSg SINE Alu 1 307 -3 2252 100 0 3 chrX_random 3258306 3258616 -6040390 + AluY SINE Alu 1 309 -2 3938 131 10 2 chrX_random 3258616 3258727 -6040279 - MER41B LTR ERV1 -13 622 513 2137 119 3 3 chrX_random 3258727 3259039 -6039967 + AluSq SINE Alu 1 312 -1 3938 131 10 2 chrX_random 3259039 3259544 -6039462 - MER41B LTR ERV1 -122 513 1 846 268 49 34 chrX_random 3259814 3260245 -6038761 - LTR29 LTR ERV1 -8 645 185 2179 125 19 3 chrX_random 3260246 3260567 -6038439 + THE1B LTR MaLR 39 364 0 2422 137 33 40 chrX_random 3260900 3261330 -6037676 + MSTB1 LTR MaLR 6 432 0 1298 155 14 0 chrX_random 3261372 3261591 -6037415 + MLT1B LTR MaLR 169 390 0 2231 163 8 14 chrX_random 3261984 3262377 -6036629 + MLT1B LTR MaLR 1 467 0 1215 158 10 11 chrX_random 3262381 3262611 -6036395 + MLT1B LTR MaLR 162 467 0 1334 172 9 0 chrX_random 3262615 3262842 -6036164 + MLT1B LTR MaLR 162 390 0 644 275 33 102 chrX_random 3263592 3263676 -6035330 + MLT1I LTR MaLR 126 214 -195 5000 73 8 0 chrX_random 3263676 3264318 -6034688 - L1PA8 LINE L1 -10 6162 5516 644 275 33 102 chrX_random 3264318 3264538 -6034468 + MLT1I LTR MaLR 214 409 0 799 211 12 12 chrX_random 3265073 3265239 -6033767 - FRAM SINE Alu -14 162 1 901 191 0 6 chrX_random 3265258 3265420 -6033586 + AluJo SINE Alu 111 271 -41 674 143 0 0 chrX_random 3265420 3265518 -6033488 - AluJ/FLAM SINE Alu -213 99 2 275 163 0 0 chrX_random 3265789 3265832 -6033174 - L1ME LINE L1 -283 5887 5845 322 340 64 44 chrX_random 3265942 3266192 -6032814 - MIR SINE MIR 0 262 8 2353 66 3 3 chrX_random 3267437 3267738 -6031268 + AluY SINE Alu 1 301 -10 640 315 44 48 chrX_random 3267834 3268269 -6030737 - L1ME3A LINE L1 -71 6099 5667 1436 184 147 21 chrX_random 3269161 3269541 -6029465 - MSTC LTR MaLR 0 428 1 556 141 0 0 chrX_random 3269829 3269907 -6029099 - FRAM SINE Alu -26 150 73 231 259 106 77 chrX_random 3270582 3270752 -6028254 - LTR16B LTR ERVL -237 227 53 259 282 102 47 chrX_random 3270900 3271262 -6027744 + L1MC/D LINE L1 5353 5734 -2074 2082 130 0 7 chrX_random 3272152 3272460 -6026546 + AluSp SINE Alu 1 306 -7 2088 95 0 0 chrX_random 3272470 3272777 -6026229 + AluSx SINE Alu 1 307 0 1717 259 72 13 chrX_random 3272855 3273129 -6025877 + MER89 LTR ERV1 1 257 -302 2273 82 0 10 chrX_random 3273129 3273432 -6025574 + AluY SINE Alu 1 300 -11 1717 259 72 13 chrX_random 3273432 3273685 -6025321 + MER89 LTR ERV1 257 559 0 186 160 80 60 chrX_random 3273913 3273963 -6025043 + MIR SINE MIR 97 147 -61 1368 202 16 26 chrX_random 3274076 3274383 -6024623 + AluJo SINE Alu 1 304 -8 192 97 0 0 chrX_random 3274537 3274568 -6024438 + (GA)n Simple_repeat Simple_repeat 2 32 0 847 232 163 92 chrX_random 3274640 3274697 -6024309 - MER92B LTR ERV1 -1 635 583 1748 147 12 38 chrX_random 3274697 3275017 -6023989 + AluSx SINE Alu 1 312 0 847 232 163 92 chrX_random 3275017 3275342 -6023664 - MER92B LTR ERV1 -53 583 202 1876 142 13 0 chrX_random 3275342 3275645 -6023361 + AluSq SINE Alu 1 307 -6 847 232 163 92 chrX_random 3275645 3275795 -6023211 - MER92B LTR ERV1 -434 202 64 806 151 50 0 chrX_random 3275795 3275934 -6023072 + AluY SINE Alu 72 217 -94 1044 127 0 0 chrX_random 3275935 3276100 -6022906 + (TTCC)n Simple_repeat Simple_repeat 4 168 0 1812 168 7 0 chrX_random 3276119 3276428 -6022578 - AluSx SINE Alu -1 311 1 410 191 0 0 chrX_random 3276430 3276498 -6022508 - MER92B LTR ERV1 -567 69 2 718 282 129 6 chrX_random 3276498 3276846 -6022160 - MER69 DNA AcHobo -21 2505 2115 1898 90 10 10 chrX_random 3276847 3277136 -6021870 + AluSg SINE Alu 1 289 -21 1278 141 0 19 chrX_random 3277244 3277450 -6021556 - AluSp SINE Alu -111 202 1 1820 137 3 31 chrX_random 3277452 3277773 -6021233 - AluSx SINE Alu 0 312 1 219 36 0 0 chrX_random 3277775 3277803 -6021203 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1788 110 3 21 chrX_random 3277803 3278085 -6020921 - AluSx SINE Alu -31 281 5 447 313 23 23 chrX_random 3278086 3278339 -6020667 - MER69 DNA AcHobo -461 2065 1810 2197 94 0 3 chrX_random 3278339 3278636 -6020370 - AluSc SINE Alu -13 296 1 733 278 15 0 chrX_random 3278637 3278835 -6020171 - MLT2B1 LTR ERVL -309 211 11 485 244 129 10 chrX_random 3278844 3279045 -6019961 + MLT1C LTR MaLR 121 345 -122 1032 249 108 38 chrX_random 3279059 3279477 -6019529 + MLT1C LTR MaLR 5 451 -16 1055 162 5 16 chrX_random 3280479 3280670 -6018336 + AluJo SINE Alu 105 293 -19 1679 139 52 0 chrX_random 3280673 3280990 -6018016 + AluJb SINE Alu 1 331 0 2317 72 0 0 chrX_random 3281295 3281587 -6017419 + AluY SINE Alu 1 292 -19 2143 108 0 3 chrX_random 3282367 3282673 -6016333 + AluSg SINE Alu 1 305 -5 354 220 20 50 chrX_random 3282760 3282860 -6016146 - MER68 LTR ERV1 0 562 466 2043 123 0 16 chrX_random 3282864 3283181 -6015825 - AluSx SINE Alu 0 312 1 312 161 0 0 chrX_random 3283198 3283260 -6015746 - Alu SINE Alu 0 302 241 677 228 42 12 chrX_random 3283336 3283503 -6015503 - AluJb SINE Alu -7 305 134 2105 114 0 3 chrX_random 3283504 3283811 -6015195 - AluSc SINE Alu -3 306 1 586 210 178 51 chrX_random 3283848 3284062 -6014944 + MLT1C LTR MaLR 6 246 -144 1550 162 60 81 chrX_random 3284063 3284292 -6014714 - THE1C LTR MaLR 0 375 156 2141 115 3 3 chrX_random 3284292 3284604 -6014402 + AluSp SINE Alu 1 312 -1 1550 162 60 81 chrX_random 3284604 3284756 -6014250 - THE1C LTR MaLR -219 156 2 318 140 69 10 chrX_random 3284957 3285044 -6013962 - MSTA LTR MaLR -265 99 3 1040 181 42 67 chrX_random 3285059 3285297 -6013709 + MSTA LTR MaLR 68 299 -129 574 228 8 8 chrX_random 3285290 3285417 -6013589 + MLT1C LTR MaLR 324 450 -17 * 1751 106 0 68 chrX_random 3285566 3285858 -6013148 - AluSc SINE Alu -11 298 27 181 231 77 0 chrX_random 3286130 3286182 -6012824 + MIR SINE MIR 86 141 -121 324 319 0 11 chrX_random 3286616 3286707 -6012299 - MIR3 SINE MIR -9 199 110 1451 154 32 12 chrX_random 3286944 3287190 -6011816 + MSTA LTR MaLR 2 252 -176 2161 116 0 0 chrX_random 3287191 3287494 -6011512 + AluSg SINE Alu 1 303 -7 1659 201 11 32 chrX_random 3287495 3287873 -6011133 - L1PB4 LINE L1 -122 6034 5665 978 63 0 53 chrX_random 3287873 3288063 -6010943 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1527 147 8 0 chrX_random 3288100 3288351 -6010655 - AluSx SINE Alu 0 312 60 613 186 10 10 chrX_random 3288354 3288482 -6010524 - L1PB4 LINE L1 -478 5676 5546 3285 152 2 31 chrX_random 3288482 3288912 -6010094 - MER1A DNA MER1_type -2175 525 113 2117 112 3 7 chrX_random 3288912 3289216 -6009790 + AluSx SINE Alu 1 303 -9 3285 152 2 31 chrX_random 3289216 3289326 -6009680 - MER1A DNA MER1_type -2587 113 1 613 186 10 10 chrX_random 3289326 3289359 -6009647 - L1PB4 LINE L1 -607 5547 5515 2090 93 3 52 chrX_random 3289815 3290139 -6008867 - AluY SINE Alu -3 308 1 2039 117 7 7 chrX_random 3290180 3290488 -6008518 - AluSq SINE Alu -5 308 1 2115 94 0 52 chrX_random 3290529 3290857 -6008149 - AluSq SINE Alu -2 311 1 1059 204 39 14 chrX_random 3290976 3291306 -6007700 + MLT1C LTR MaLR 5 422 -45 1791 167 3 3 chrX_random 3291306 3291728 -6007278 - AluSx SINE Alu 0 422 1 2895 132 2 2 chrX_random 3291845 3292293 -6006713 - L1PB1 LINE L1 -3 6148 5701 407 103 15 0 chrX_random 3292294 3292362 -6006644 + L1PB2 LINE L1 6080 6148 -3 682 142 1 9 chrX_random 3292378 3292503 -6006503 - L1PB1 LINE L1 -454 5702 5578 369 152 0 51 chrX_random 3292503 3292582 -6006424 - L1P5 LINE L1 -525 5626 5552 * 412 137 0 14 chrX_random 3292552 3292625 -6006381 - L1P5 LINE L1 -525 5626 5555 369 82 0 0 chrX_random 3292601 3292650 -6006356 - L1P5 LINE L1 -525 5626 5578 * 385 108 40 14 chrX_random 3292650 3292724 -6006282 - L1P5 LINE L1 -525 5626 5551 * 395 151 0 14 chrX_random 3292699 3292772 -6006234 - L1P5 LINE L1 -525 5626 5555 365 178 0 14 chrX_random 3292748 3292821 -6006185 - L1P5 LINE L1 -525 5626 5555 * 376 98 0 0 chrX_random 3292797 3292848 -6006158 - L1P5 LINE L1 -525 5626 5576 2642 110 1 7 chrX_random 3292848 3293311 -6005695 - L1P5 LINE L1 -527 5624 5164 1965 122 7 3 chrX_random 3293986 3294281 -6004725 + AluSq SINE Alu 2 297 -16 401 301 241 34 chrX_random 3294869 3295030 -6003976 - L1MC5 LINE L1 -74 7887 7761 2013 110 0 35 chrX_random 3295030 3295348 -6003658 - AluSg SINE Alu -3 307 1 401 301 241 34 chrX_random 3295348 3295535 -6003471 - L1MC5 LINE L1 -200 7761 7467 1576 111 9 0 chrX_random 3295761 3295987 -6003019 - AluSg/x SINE Alu 0 310 83 584 167 47 0 chrX_random 3295995 3296145 -6002861 + GA-rich Low_complexity Low_complexity 4 160 0 2298 92 3 0 chrX_random 3296982 3297286 -6001720 - AluSx SINE Alu -7 305 1 644 263 29 34 chrX_random 3297293 3297605 -6001401 - MSTD LTR MaLR 0 396 10 304 242 85 26 chrX_random 3297762 3297895 -6001111 + MIR3 SINE MIR 76 212 -41 677 215 85 22 chrX_random 3297983 3298206 -6000800 - L1MA9 LINE L1 -39 6273 6037 1332 97 0 0 chrX_random 3298254 3298440 -6000566 - AluY SINE Alu -6 305 120 229 222 19 0 chrX_random 3298448 3298502 -6000504 + CT-rich Low_complexity Low_complexity 3 57 0 2132 99 3 7 chrX_random 3299297 3299591 -5999415 + AluSx SINE Alu 1 293 -19 1891 139 7 3 chrX_random 3300022 3300324 -5998682 - AluSx SINE Alu -9 303 1 1821 255 23 13 chrX_random 3300333 3300867 -5998139 - L1MB5 LINE L1 -1 6179 5666 1893 208 6 3 chrX_random 3300867 3301214 -5997792 + MLT1A1 LTR MaLR 1 348 -17 478 280 91 17 chrX_random 3303211 3303443 -5995563 + MER76 LTR ERV 3 251 -437 2197 75 18 0 chrX_random 3303731 3304049 -5994957 + AluSq SINE Alu 1 323 0 1983 86 32 4 chrX_random 3304061 3304339 -5994667 + AluSx SINE Alu 1 286 -26 335 222 0 28 chrX_random 3304340 3304412 -5994594 + L1MC4 LINE L1 6636 6705 -1337 217 246 0 18 chrX_random 3304424 3304481 -5994525 + (TATG)n Simple_repeat Simple_repeat 2 57 0 997 66 15 7 chrX_random 3304584 3304721 -5994285 - AluSq/x SINE Alu -174 138 1 853 246 0 0 chrX_random 3304732 3304923 -5994083 - AluJb SINE Alu -2 310 120 2230 91 0 3 chrX_random 3304931 3305228 -5993778 - AluSq SINE Alu -17 296 1 2112 100 0 0 chrX_random 3305481 3305771 -5993235 - AluSc SINE Alu -19 290 1 700 113 0 0 chrX_random 3306204 3306301 -5992705 + AluSg/x SINE Alu 196 292 -20 212 179 0 0 chrX_random 3306542 3306581 -5992425 + A-rich Low_complexity Low_complexity 2 40 0 554 77 13 0 chrX_random 3306610 3306688 -5992318 + L1MA2 LINE L1 6073 6151 -153 364 57 0 60 chrX_random 3306688 3306730 -5992276 - THE1B LTR MaLR 0 355 339 2226 103 0 0 chrX_random 3306730 3307040 -5991966 + AluSx SINE Alu 1 310 -2 364 57 0 60 chrX_random 3307040 3307065 -5991941 - THE1B LTR MaLR -16 339 314 1851 143 34 28 chrX_random 3307070 3307392 -5991614 - THE1B LTR MaLR -25 339 16 413 105 0 0 chrX_random 3307392 3307449 -5991557 - THE1B LTR MaLR -292 72 16 * 428 103 0 0 chrX_random 3307448 3307506 -5991500 - THE1B LTR MaLR -291 73 16 415 105 0 0 chrX_random 3307505 3307562 -5991444 - THE1B LTR MaLR -291 73 17 * 529 123 0 0 chrX_random 3307562 3307635 -5991371 - THE1B LTR MaLR -291 73 1 785 93 0 0 chrX_random 3307635 3307742 -5991264 + L1MA2 LINE L1 6147 6253 -51 1020 212 13 31 chrX_random 3307820 3308046 -5990960 - MLT2B1 LTR ERVL -227 293 72 1821 54 0 0 chrX_random 3308058 3308280 -5990726 + L1PA7 LINE L1 5925 6146 -8 249 83 62 0 chrX_random 3308335 3308383 -5990623 + L1MA3 LINE L1 6255 6305 0 210 154 0 0 chrX_random 3308858 3308897 -5990109 + GA-rich Low_complexity Low_complexity 4 42 0 309 241 56 28 chrX_random 3308936 3309044 -5989962 + L1M4 LINE L1 3073 3183 -2963 675 195 22 4 chrX_random 3309044 3309326 -5989680 + GA-rich Low_complexity Low_complexity 1 287 0 804 145 0 38 chrX_random 3309334 3309520 -5989486 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 793 117 0 48 chrX_random 3309550 3309738 -5989268 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 1135 120 0 0 chrX_random 3310436 3310603 -5988403 - AluSq SINE Alu -18 295 129 21 0 0 0 chrX_random 3310610 3310631 -5988375 + AT_rich Low_complexity Low_complexity 1 21 0 2372 84 0 0 chrX_random 3311285 3311593 -5987413 - AluSx SINE Alu -4 308 1 958 128 0 0 chrX_random 3311730 3311871 -5987135 + AluSg/x SINE Alu 155 295 -17 1331 258 66 34 chrX_random 3312194 3312636 -5986370 - MLT1C LTR MaLR -6 461 6 815 243 88 40 chrX_random 3312651 3312980 -5986026 - MLT1C LTR MaLR -122 345 1 763 250 100 36 chrX_random 3312996 3313276 -5985730 - MLT1C LTR MaLR -128 339 42 214 338 13 13 chrX_random 3313555 3313632 -5985374 - L2 LINE L2 -7 3306 3230 2549 181 24 18 chrX_random 3313785 3314206 -5984800 - MER75 DNA T2_type -4 510 84 2020 91 35 3 chrX_random 3314206 3314492 -5984514 + AluSx SINE Alu 1 295 -17 2549 181 24 18 chrX_random 3314492 3314577 -5984429 - MER75 DNA T2_type -430 84 1 1741 115 0 0 chrX_random 3315147 3315399 -5983607 - AluSx SINE Alu -15 297 46 1101 52 0 0 chrX_random 3315399 3315533 -5983473 - AluSg SINE Alu -176 134 1 39 22 0 0 chrX_random 3315926 3315972 -5983034 + AT_rich Low_complexity Low_complexity 1 46 0 1781 122 21 3 chrX_random 3316017 3316304 -5982702 - AluY SINE Alu -19 292 1 21 0 0 0 chrX_random 3316312 3316333 -5982673 + AT_rich Low_complexity Low_complexity 1 21 0 216 187 67 30 chrX_random 3316527 3316661 -5982345 + (TA)n Simple_repeat Simple_repeat 2 140 0 2143 98 0 0 chrX_random 3316667 3316954 -5982052 + AluSg SINE Alu 1 287 -23 249 267 61 0 chrX_random 3317070 3317201 -5981805 + (TA)n Simple_repeat Simple_repeat 1 139 0 305 197 33 0 chrX_random 3317217 3317278 -5981728 - L1MC4 LINE L1 -1340 6702 6640 341 232 71 27 chrX_random 3317503 3317615 -5981391 + MLT1A1 LTR MaLR 5 121 -244 * 1140 234 33 4 chrX_random 3317597 3317870 -5981136 + MLT1A1 LTR MaLR 33 313 -52 2011 158 8 22 chrX_random 3317916 3318247 -5980759 + MLT1A1 LTR MaLR 4 331 -34 2018 87 4 7 chrX_random 3318247 3318522 -5980484 - AluSx SINE Alu -13 299 26 2011 158 8 22 chrX_random 3318522 3318557 -5980449 + MLT1A1 LTR MaLR 331 365 0 2199 81 0 10 chrX_random 3318723 3319021 -5979985 + AluSg SINE Alu 1 295 -15 2035 101 7 0 chrX_random 3319373 3319659 -5979347 - AluSq SINE Alu -25 288 1 565 247 86 0 chrX_random 3319663 3319825 -5979181 - MLT1C LTR MaLR -285 182 7 2072 99 3 7 chrX_random 3320107 3320411 -5978595 + AluSg SINE Alu 1 303 -7 1937 116 18 0 chrX_random 3320426 3320711 -5978295 + AluSq SINE Alu 1 290 -23 182 79 66 26 chrX_random 3320714 3320747 -5978259 + (TATAA)n Simple_repeat Simple_repeat 2 32 -48 1964 114 0 3 chrX_random 3320747 3321037 -5977969 + AluSq SINE Alu 1 289 -24 182 79 66 26 chrX_random 3321037 3321070 -5977936 + (TATAA)n Simple_repeat Simple_repeat 32 74 -6 2110 114 0 3 chrX_random 3321070 3321378 -5977628 + AluSq SINE Alu 1 307 -6 182 79 66 26 chrX_random 3321378 3321386 -5977620 + (TATAA)n Simple_repeat Simple_repeat 74 80 0 827 216 64 57 chrX_random 3321757 3322039 -5976967 + L1MB8 LINE L1 5856 6139 -39 932 86 0 16 chrX_random 3322127 3322255 -5976751 + AluSq/x SINE Alu 1 126 -186 264 61 0 0 chrX_random 3322347 3322380 -5976626 + THE1B LTR MaLR 155 187 -177 841 152 30 42 chrX_random 3322385 3322550 -5976456 - AluJo SINE Alu -38 274 112 180 0 0 0 chrX_random 3322559 3322579 -5976427 + (TA)n Simple_repeat Simple_repeat 2 21 0 1551 137 4 0 chrX_random 3322579 3322844 -5976162 + AluSx SINE Alu 42 307 0 507 121 29 114 chrX_random 3322844 3322940 -5976066 - Tigger1 DNA MER2_type -97 2321 2239 1284 56 0 0 chrX_random 3322940 3323100 -5975906 - L1PA5 LINE L1 -3 6151 5992 507 121 29 114 chrX_random 3323100 3323143 -5975863 - Tigger1 DNA MER2_type -179 2239 2194 347 224 17 95 chrX_random 3323128 3323244 -5975762 - Tigger1 DNA MER2_type -2311 107 1 * 1817 129 7 0 chrX_random 3323313 3323662 -5975344 - AluSx SINE Alu 0 351 1 203 318 19 19 chrX_random 3324957 3325111 -5973895 + (TAA)n Simple_repeat Simple_repeat 2 155 0 203 318 19 19 chrX_random 3325308 3325462 -5973544 + (TAA)n Simple_repeat Simple_repeat 2 155 0 203 318 19 19 chrX_random 3326368 3326522 -5972484 + (TAA)n Simple_repeat Simple_repeat 2 155 0 2209 99 0 6 chrX_random 3328106 3328418 -5970588 + AluY SINE Alu 1 310 -1 1870 131 0 3 chrX_random 3328488 3328798 -5970208 + AluSx SINE Alu 1 309 0 722 187 0 0 chrX_random 3328800 3328923 -5970083 + MSTC LTR MaLR 47 169 -259 1367 140 5 0 chrX_random 3328986 3329200 -5969806 - MLT1B LTR MaLR -17 373 159 1385 140 5 9 chrX_random 3329201 3329435 -5969571 - MLT1B LTR MaLR 0 396 159 440 188 13 32 chrX_random 3329436 3329560 -5969446 - MLT1A1 LTR MaLR 0 365 285 4496 78 3 0 chrX_random 3330286 3330873 -5968133 + L1PA7 LINE L1 5566 6154 0 774 201 6 56 chrX_random 3331106 3331276 -5967730 + MLT1C LTR MaLR 1 161 -306 768 243 33 0 chrX_random 3331276 3331457 -5967549 - MLT1A1 LTR MaLR 0 365 179 324 150 17 0 chrX_random 3331494 3331554 -5967452 - MLT1A1 LTR MaLR -334 92 32 270 169 34 0 chrX_random 3331552 3331611 -5967395 - MSTB LTR MaLR -334 92 32 * 259 141 31 31 chrX_random 3331604 3331668 -5967338 - MSTB LTR MaLR -331 95 32 * 352 105 18 0 chrX_random 3331668 3331725 -5967281 - MSTB LTR MaLR -337 89 32 275 196 18 0 chrX_random 3331727 3331783 -5967223 - MSTB LTR MaLR -338 88 32 256 183 17 0 chrX_random 3331781 3331841 -5967165 - MSTB LTR MaLR -334 92 32 * 231 136 34 34 chrX_random 3331834 3331893 -5967113 - MSTB LTR MaLR -331 95 37 * 316 119 34 0 chrX_random 3331896 3331955 -5967051 - MSTB LTR MaLR -334 92 32 290 167 17 0 chrX_random 3331953 3332013 -5966993 - MSTB LTR MaLR -334 92 32 * 293 143 18 0 chrX_random 3332015 3332071 -5966935 - MSTB LTR MaLR -338 88 32 284 169 17 0 chrX_random 3332069 3332128 -5966878 - MSTB1 LTR MaLR -340 92 33 * 305 150 17 0 chrX_random 3332127 3332187 -5966819 - MSTB LTR MaLR -334 92 32 257 203 17 0 chrX_random 3332185 3332244 -5966762 - MSTB1 LTR MaLR -340 92 33 * 294 167 17 0 chrX_random 3332243 3332303 -5966703 - MSTB LTR MaLR -334 92 32 * 298 172 17 0 chrX_random 3332301 3332359 -5966647 - MSTB1 LTR MaLR -340 92 34 246 123 46 46 chrX_random 3332354 3332419 -5966587 - MSTB LTR MaLR -331 95 31 * 303 154 15 31 chrX_random 3332411 3332476 -5966530 - MSTB LTR MaLR -331 95 32 * 336 150 17 0 chrX_random 3332474 3332534 -5966472 - MSTB LTR MaLR -334 92 32 299 183 17 0 chrX_random 3332532 3332592 -5966414 - MSTB LTR MaLR -334 92 32 * 295 167 17 0 chrX_random 3332648 3332708 -5966298 - MSTB1 LTR MaLR -340 92 32 256 154 19 0 chrX_random 3332711 3332763 -5966243 - MSTB LTR MaLR -339 87 35 232 209 15 30 chrX_random 3332756 3332823 -5966183 - MSTB1 LTR MaLR -334 98 33 * 229 217 17 0 chrX_random 3332822 3332882 -5966124 - MSTB LTR MaLR -334 92 32 * 330 133 17 0 chrX_random 3332880 3332940 -5966066 - MSTB LTR MaLR -334 92 32 * 369 117 17 0 chrX_random 3332938 3332998 -5966008 - MSTB LTR MaLR -334 92 32 271 179 18 0 chrX_random 3333000 3333056 -5965950 - MSTB LTR MaLR -338 88 32 249 200 17 0 chrX_random 3333054 3333114 -5965892 - MSTB LTR MaLR -334 92 32 * 303 186 17 0 chrX_random 3333112 3333171 -5965835 - MSTB1 LTR MaLR -340 92 33 285 167 17 0 chrX_random 3333170 3333230 -5965776 - MSTB LTR MaLR -334 92 32 * 295 183 17 0 chrX_random 3333228 3333288 -5965718 - MSTB LTR MaLR -334 92 32 * 313 150 17 0 chrX_random 3333286 3333346 -5965660 - MSTB LTR MaLR -334 92 32 278 200 17 0 chrX_random 3333344 3333404 -5965602 - MSTB LTR MaLR -334 92 32 * 349 133 17 0 chrX_random 3333402 3333462 -5965544 - MSTB1 LTR MaLR -340 92 32 294 169 15 31 chrX_random 3333455 3333520 -5965486 - MSTB1 LTR MaLR -337 95 32 * 284 108 31 46 chrX_random 3333513 3333578 -5965428 - MSTB LTR MaLR -331 95 32 * 296 167 17 0 chrX_random 3333576 3333636 -5965370 - MSTB LTR MaLR -334 92 32 * 316 150 17 0 chrX_random 3333634 3333694 -5965312 - MSTB LTR MaLR -334 92 32 297 172 17 0 chrX_random 3333692 3333750 -5965256 - MSTB LTR MaLR -334 92 34 * 269 185 15 31 chrX_random 3333745 3333810 -5965196 - MSTB LTR MaLR -331 95 32 * 278 183 17 0 chrX_random 3333808 3333868 -5965138 - MSTB LTR MaLR -334 92 32 301 143 18 0 chrX_random 3333870 3333926 -5965080 - MSTB LTR MaLR -338 88 32 * 309 167 17 0 chrX_random 3333924 3333984 -5965022 - MSTB LTR MaLR -334 92 32 295 183 17 0 chrX_random 3333982 3334042 -5964964 - MSTB LTR MaLR -334 92 32 * 330 133 17 0 chrX_random 3334040 3334100 -5964906 - MSTB LTR MaLR -334 92 32 291 148 16 16 chrX_random 3334098 3334159 -5964847 - MSTB LTR MaLR -334 92 32 * 247 164 91 0 chrX_random 3334157 3334212 -5964794 - MSTB1 LTR MaLR -340 92 33 * 330 167 17 0 chrX_random 3334211 3334271 -5964735 - MSTB1 LTR MaLR -340 92 32 306 154 15 31 chrX_random 3334264 3334329 -5964677 - MSTB LTR MaLR -331 95 32 * 333 153 17 0 chrX_random 3334327 3334386 -5964620 - MSTB1 LTR MaLR -340 92 33 299 167 17 0 chrX_random 3334385 3334445 -5964561 - MSTB LTR MaLR -334 92 32 * 265 200 17 0 chrX_random 3334443 3334503 -5964503 - MSTB LTR MaLR -334 92 32 * 268 167 17 0 chrX_random 3334501 3334561 -5964445 - MSTB LTR MaLR -334 92 32 * 322 164 16 0 chrX_random 3334559 3334620 -5964386 - MSTB LTR MaLR -334 92 31 309 156 0 47 chrX_random 3334617 3334681 -5964325 - MSTB LTR MaLR -334 92 32 * 315 156 0 47 chrX_random 3334679 3334743 -5964263 - MSTB LTR MaLR -334 92 32 249 169 34 0 chrX_random 3334741 3334800 -5964206 - MSTB LTR MaLR -334 92 32 * 280 175 18 0 chrX_random 3334803 3334860 -5964146 - MSTB LTR MaLR -339 87 30 272 164 16 49 chrX_random 3334856 3334917 -5964089 - MSTB1 LTR MaLR -340 92 34 * 316 113 32 32 chrX_random 3334912 3334974 -5964032 - MSTB LTR MaLR -331 95 34 567 135 10 21 chrX_random 3335027 3335123 -5963883 - MSTB LTR MaLR -331 95 1 750 256 165 4 chrX_random 3335160 3335426 -5963580 + MLT1C LTR MaLR 157 465 -2 1937 121 0 43 chrX_random 3335509 3335831 -5963175 - AluSg SINE Alu 0 310 3 616 279 6 6 chrX_random 3335863 3336028 -5962978 + MLT1C LTR MaLR 301 465 -2 2005 114 7 7 chrX_random 3336091 3336389 -5962617 - AluSc SINE Alu -11 298 1 359 237 0 44 chrX_random 3336556 3336670 -5962336 + L1MA8 LINE L1 6179 6287 -4 400 309 0 15 chrX_random 3336790 3336926 -5962080 + MLT1B LTR MaLR 255 388 -2 2161 95 0 28 chrX_random 3337020 3337337 -5961669 - AluSg SINE Alu -2 308 1 237 237 8 51 chrX_random 3337443 3337561 -5961445 + L1MA8 LINE L1 6179 6291 0 314 100 0 0 chrX_random 3337584 3337624 -5961382 - U6 snRNA snRNA -66 41 2 525 213 70 30 chrX_random 3337681 3337837 -5961169 + MLT1C LTR MaLR 320 465 -2 1657 116 0 41 chrX_random 3337860 3338203 -5960803 + AluSx SINE Alu 28 359 0 1380 117 5 59 chrX_random 3338258 3338480 -5960526 - THE1B LTR MaLR 0 364 155 1665 87 0 0 chrX_random 3338480 3338699 -5960307 + AluSq SINE Alu 1 219 -94 1978 133 0 16 chrX_random 3338699 3339007 -5959999 + AluSg SINE Alu 1 303 -7 2107 97 7 0 chrX_random 3339292 3339582 -5959424 - AluSq SINE Alu -21 292 1 1255 144 10 0 chrX_random 3339946 3340147 -5958859 + AluSx SINE Alu 1 203 -109 499 62 0 0 chrX_random 3340147 3340212 -5958794 + AluSq/x SINE Alu 69 133 -180 923 128 0 0 chrX_random 3340212 3340345 -5958661 + AluSq/x SINE Alu 1 133 -180 1940 138 0 0 chrX_random 3340345 3340642 -5958364 + AluSx SINE Alu 1 297 -15 1950 137 3 0 chrX_random 3340859 3341166 -5957840 - AluSx SINE Alu -4 308 1 259 79 26 0 chrX_random 3342083 3342121 -5956885 + (GAAA)n Simple_repeat Simple_repeat 1 39 0 970 147 28 17 chrX_random 3342121 3342472 -5956534 + GA-rich Low_complexity Low_complexity 3 356 0 430 323 128 15 chrX_random 3342472 3342667 -5956339 + HAL1 LINE L1 1716 1932 -575 2167 98 0 10 chrX_random 3343162 3343469 -5955537 - AluSx SINE Alu -8 304 1 2907 93 19 14 chrX_random 3343807 3344343 -5954663 - LTR61 LTR ERV1 0 595 1 1638 123 35 147 chrX_random 3344370 3344792 -5954214 - THE1C LTR MaLR 0 375 1 645 93 12 0 chrX_random 3344854 3344940 -5954066 - THE1B LTR MaLR -277 87 1 599 116 12 0 chrX_random 3345002 3345088 -5953918 - THE1B LTR MaLR -277 87 1 645 93 12 0 chrX_random 3345150 3345236 -5953770 - THE1B LTR MaLR -277 87 1 600 111 0 0 chrX_random 3345303 3345384 -5953622 - THE1B LTR MaLR -283 81 1 618 89 0 0 chrX_random 3345451 3345530 -5953476 - THE1B LTR MaLR -283 81 3 2185 92 0 43 chrX_random 3346934 3347261 -5951745 - AluSq SINE Alu 0 313 1 1751 184 37 85 chrX_random 3347563 3347735 -5951271 + MSTB1 LTR MaLR 3 182 -182 3255 58 0 5 chrX_random 3347735 3348148 -5950858 - L1PA7 LINE L1 -1 6153 5743 1751 184 37 85 chrX_random 3348148 3348356 -5950650 + MSTB1 LTR MaLR 182 398 34 222 116 0 0 chrX_random 3348356 3348399 -5950607 + (ATTG)n Simple_repeat Simple_repeat 2 44 0 1904 108 0 47 chrX_random 3348400 3348696 -5950310 - AluSq SINE Alu -31 282 1 1751 184 37 85 chrX_random 3348696 3348753 -5950253 + MSTB1 LTR MaLR 298 356 -8 2050 111 0 0 chrX_random 3348972 3349260 -5949746 + AluSc SINE Alu 11 298 -11 1917 126 0 11 chrX_random 3349336 3349648 -5949358 + AluSx SINE Alu 1 309 0 334 73 0 0 chrX_random 3349821 3349862 -5949144 - Alu SINE Alu -259 42 2 780 181 58 47 chrX_random 3349862 3350033 -5948973 + AluJb SINE Alu 116 288 -24 1917 116 0 4 chrX_random 3350045 3350322 -5948684 + AluSx SINE Alu 25 300 -12 638 219 118 25 chrX_random 3350438 3350676 -5948330 + MLT1C LTR MaLR 55 314 -153 507 155 0 0 chrX_random 3350685 3350769 -5948237 + L1MA8 LINE L1 6193 6276 -15 2081 131 0 0 chrX_random 3350840 3351152 -5947854 + AluSq SINE Alu 1 312 -1 2173 89 0 3 chrX_random 3351390 3351682 -5947324 - AluSx SINE Alu -4 308 18 1970 68 0 29 chrX_random 3351735 3352016 -5946990 + AluY SINE Alu 33 305 -6 1838 85 0 0 chrX_random 3352547 3352782 -5946224 + AluSx SINE Alu 1 235 -77 21 0 0 0 chrX_random 3352791 3352812 -5946194 + AT_rich Low_complexity Low_complexity 1 21 0 2438 61 0 3 chrX_random 3353359 3353699 -5945307 - AluY SINE Alu 0 339 1 1972 126 0 13 chrX_random 3353827 3354137 -5944869 - AluSx SINE Alu -4 308 3 1758 175 0 3 chrX_random 3354147 3354455 -5944551 - AluJo SINE Alu -3 309 3 7321 45 6 0 chrX_random 3354537 3355467 -5943539 - L1PA6 LINE L1 -1 6153 5221 1379 65 0 0 chrX_random 3355467 3355637 -5943369 - L1P2 LINE L1 -493 5661 5492 1948 107 3 37 chrX_random 3356108 3356408 -5942598 - AluSx SINE Alu -20 292 3 1708 155 21 10 chrX_random 3356547 3356837 -5942169 - AluSx SINE Alu -19 293 1 2049 87 3 69 chrX_random 3356906 3357238 -5941768 - AluSg SINE Alu 0 310 1 2155 110 0 0 chrX_random 3357528 3357837 -5941169 + AluSg SINE Alu 1 309 -1 1486 69 0 0 chrX_random 3357838 3358026 -5940980 + AluY SINE Alu 124 311 0 1515 102 127 8 chrX_random 3358115 3358393 -5940613 - AluSg SINE Alu 0 314 8 442 260 21 0 chrX_random 3358539 3358635 -5940371 - MER5A DNA MER1_type -83 106 9 2173 89 3 0 chrX_random 3358911 3359204 -5939802 + AluSc SINE Alu 11 304 -5 207 0 0 0 chrX_random 3359584 3359607 -5939399 + (TAAA)n Simple_repeat Simple_repeat 3 25 0 32 26 0 0 chrX_random 3359607 3359646 -5939360 + AT_rich Low_complexity Low_complexity 1 39 0 2034 157 167 10 chrX_random 3359747 3360160 -5938846 + LTR19A LTR ERV1 1 478 -8 2020 95 20 0 chrX_random 3360164 3360458 -5938548 - AluY SINE Alu -11 300 1 1966 119 4 4 chrX_random 3360883 3361161 -5937845 + AluSx SINE Alu 1 278 -34 715 159 9 27 chrX_random 3361161 3361615 -5937391 + GA-rich Low_complexity Low_complexity 1 446 0 2055 119 0 0 chrX_random 3362223 3362517 -5936489 - AluSg SINE Alu -16 294 1 402 282 134 35 chrX_random 3362520 3362722 -5936284 + MLT1C LTR MaLR 156 377 -90 1023 75 0 0 chrX_random 3362724 3362858 -5936148 + AluYb8 SINE Alu 1 134 -184 2084 96 0 0 chrX_random 3362858 3363179 -5935827 + AluY SINE Alu 1 321 0 1151 177 43 0 chrX_random 3363251 3363460 -5935546 - MLT1A1 LTR MaLR 0 365 148 557 149 0 0 chrX_random 3363450 3363537 -5935469 - MLT1A1 LTR MaLR -131 234 148 * 573 149 0 0 chrX_random 3363527 3363614 -5935392 - MLT1A1 LTR MaLR -131 234 148 557 149 0 0 chrX_random 3363604 3363691 -5935315 - MLT1A1 LTR MaLR -131 234 148 * 573 149 0 0 chrX_random 3363681 3363768 -5935238 - MLT1A1 LTR MaLR -131 234 148 557 149 0 0 chrX_random 3363758 3363845 -5935161 - MLT1A1 LTR MaLR -131 234 148 * 579 138 0 0 chrX_random 3363835 3363922 -5935084 - MLT1A1 LTR MaLR -131 234 148 * 708 143 0 0 chrX_random 3363912 3364017 -5934989 - MLT1A1 LTR MaLR -131 234 130 1644 214 30 68 chrX_random 3364030 3364192 -5934814 + MSTB LTR MaLR 17 184 -242 3445 43 0 0 chrX_random 3364192 3364606 -5934400 - L1PA5 LINE L1 0 6154 5741 1644 214 30 68 chrX_random 3364606 3364831 -5934175 + MSTB LTR MaLR 184 389 -37 2118 105 7 3 chrX_random 3364831 3365136 -5933870 - AluSx SINE Alu -6 306 1 1644 214 30 68 chrX_random 3365136 3365173 -5933833 + MSTB LTR MaLR 389 426 0 737 161 15 7 chrX_random 3365173 3365310 -5933696 - MLT1A1 LTR MaLR -227 138 1 782 267 22 17 chrX_random 3365310 3365542 -5933464 + MER92B LTR ERV1 26 258 -378 628 254 60 67 chrX_random 3365544 3365726 -5933280 - MLT1C LTR MaLR -93 374 193 2235 89 7 0 chrX_random 3365726 3366028 -5932978 - AluSp SINE Alu -9 304 1 628 254 60 67 chrX_random 3366028 3366129 -5932877 - MLT1C LTR MaLR -274 193 93 250 254 91 27 chrX_random 3366118 3366228 -5932778 + MER92B LTR ERV1 254 370 -266 * 2299 60 7 10 chrX_random 3366450 3366749 -5932257 + AluY SINE Alu 1 298 -13 1013 153 0 0 chrX_random 3366749 3366919 -5932087 + AluSg/x SINE Alu 133 302 -7 1346 232 67 36 chrX_random 3367026 3367474 -5931532 - MLT1C LTR MaLR 0 467 6 1062 206 92 49 chrX_random 3367489 3367815 -5931191 - MLT1C LTR MaLR -122 345 6 652 274 55 60 chrX_random 3367830 3367984 -5931022 - MLT1C LTR MaLR -122 345 192 2062 113 10 0 chrX_random 3367984 3368285 -5930721 - AluSg SINE Alu -6 304 1 652 274 55 60 chrX_random 3368285 3368448 -5930558 - MLT1C LTR MaLR -275 192 24 1721 169 0 72 chrX_random 3369261 3369429 -5929577 - LTR39 LTR ERV1 -1 782 604 2010 100 10 0 chrX_random 3369429 3369720 -5929286 - AluSg SINE Alu -16 294 1 1721 169 0 72 chrX_random 3369720 3369746 -5929260 - LTR39 LTR ERV1 -179 604 578 1313 232 0 3 chrX_random 3369746 3370039 -5928967 - AluJb SINE Alu -20 292 1 1721 169 0 72 chrX_random 3370039 3370191 -5928815 - LTR39 LTR ERV1 -205 578 460 709 110 10 0 chrX_random 3370193 3370293 -5928713 + AluS SINE Alu 2 102 -210 685 189 12 6 chrX_random 3370293 3370457 -5928549 + GA-rich Low_complexity Low_complexity 2 166 0 218 192 19 0 chrX_random 3370475 3370527 -5928479 + A-rich Low_complexity Low_complexity 3 55 0 246 165 71 0 chrX_random 3370538 3370623 -5928383 + GA-rich Low_complexity Low_complexity 4 94 0 1033 45 34 28 chrX_random 3370635 3370814 -5928192 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 3853 81 0 6 chrX_random 3371525 3372041 -5926965 - L1PA8 LINE L1 0 6172 5660 1444 176 0 22 chrX_random 3372051 3372329 -5926677 - AluJo SINE Alu -23 289 18 234 0 0 0 chrX_random 3372344 3372370 -5926636 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 660 153 17 25 chrX_random 3372372 3372490 -5926516 - FLAM_C SINE Alu -16 117 1 2050 103 3 0 chrX_random 3372874 3373164 -5925842 - AluSg SINE Alu -19 291 1 2219 99 0 3 chrX_random 3373743 3374047 -5924959 + AluSg SINE Alu 1 303 -7 3532 111 39 42 chrX_random 3374379 3374410 -5924596 + LTR61 LTR ERV1 1 31 -564 2268 60 0 0 chrX_random 3374410 3374713 -5924293 + AluY SINE Alu 1 303 0 3532 111 39 42 chrX_random 3374713 3375277 -5923729 + LTR61 LTR ERV1 31 595 0 2304 104 0 0 chrX_random 3375291 3375599 -5923407 + AluSg SINE Alu 1 308 -2 556 305 0 9 chrX_random 3375617 3375827 -5923179 + L1M4 LINE L1 2325 2532 -3614 226 224 0 0 chrX_random 3375867 3375916 -5923090 + L1M4 LINE L1 2535 2583 -3563 1746 161 3 0 chrX_random 3375944 3376229 -5922777 + AluJb SINE Alu 1 286 -26 1655 148 30 0 chrX_random 3376266 3376558 -5922448 + AluSx SINE Alu 7 306 0 183 100 0 0 chrX_random 3376560 3376590 -5922416 + (CAAT)n Simple_repeat Simple_repeat 3 32 0 2183 275 47 66 chrX_random 3376591 3376922 -5922084 + L1M4 LINE L1 2644 2980 -3166 1901 98 3 83 chrX_random 3376922 3377247 -5921759 + AluSx SINE Alu 1 299 -13 2183 275 47 66 chrX_random 3377247 3377794 -5921212 + L1M4 LINE L1 2980 3536 -2610 2000 121 3 0 chrX_random 3377794 3378076 -5920930 - AluSc SINE Alu -26 283 1 2183 275 47 66 chrX_random 3378076 3378679 -5920327 + L1M4 LINE L1 3536 4098 -2048 2038 124 3 3 chrX_random 3378744 3379051 -5919955 - AluSc SINE Alu -2 307 1 240 183 28 28 chrX_random 3379051 3379122 -5919884 - L1M LINE L1 -975 5328 5258 2137 107 0 0 chrX_random 3379282 3379582 -5919424 - AluSg SINE Alu -10 300 1 274 363 28 28 chrX_random 3379666 3379878 -5919128 - L1MC4a LINE L1 -1897 5911 5700 2173 95 10 0 chrX_random 3379923 3380218 -5918788 - AluSp SINE Alu -15 298 1 183 80 0 0 chrX_random 3380364 3380389 -5918617 + (TTTG)n Simple_repeat Simple_repeat 4 28 0 826 179 0 7 chrX_random 3380389 3380534 -5918472 - FRAM SINE Alu -32 144 1 2021 117 0 7 chrX_random 3380538 3380838 -5918168 - AluSc SINE Alu -11 298 1 1942 135 0 0 chrX_random 3381011 3381293 -5917713 - AluSx SINE Alu -30 282 1 558 186 27 26 chrX_random 3381300 3381757 -5917249 + CT-rich Low_complexity Low_complexity 1 457 0 215 271 35 35 chrX_random 3382215 3382300 -5916706 + MIR SINE MIR 143 227 -35 1964 121 3 26 chrX_random 3382354 3382667 -5916339 - AluSc SINE Alu -3 306 1 561 254 0 0 chrX_random 3382742 3382872 -5916134 - L1MB5 LINE L1 -314 5860 5731 * 819 201 19 43 chrX_random 3382861 3383070 -5915936 + L1MB5 LINE L1 5971 6174 0 1984 91 57 3 chrX_random 3383081 3383378 -5915628 - AluSq SINE Alu 0 313 1 1765 129 0 0 chrX_random 3383612 3383876 -5915130 + AluSx SINE Alu 14 277 -35 344 219 31 62 chrX_random 3383881 3383977 -5915029 - L1MC4 LINE L1 -1337 6705 6613 335 167 43 0 chrX_random 3383992 3384154 -5914852 + (TA)n Simple_repeat Simple_repeat 1 169 0 268 136 45 30 chrX_random 3384181 3384313 -5914693 + (TA)n Simple_repeat Simple_repeat 2 135 0 424 118 0 0 chrX_random 3384634 3384702 -5914304 + AluSc SINE Alu 240 307 -2 424 333 11 6 chrX_random 3384924 3385101 -5913905 + MER5B DNA MER1_type 1 178 0 389 113 0 0 chrX_random 3385206 3385259 -5913747 - L1P4 LINE L1 -449 5712 5660 1968 128 0 0 chrX_random 3385259 3385569 -5913437 - AluSx SINE Alu 0 311 2 991 65 0 0 chrX_random 3385570 3385693 -5913313 - AluSq/x SINE Alu -177 135 13 481 60 60 0 chrX_random 3385693 3385760 -5913246 - AluSg/x SINE Alu -174 136 66 1329 112 0 0 chrX_random 3385761 3385948 -5913058 - AluSx SINE Alu -113 199 13 586 90 0 0 chrX_random 3385950 3386028 -5912978 - AluSg SINE Alu -176 134 57 1243 127 0 0 chrX_random 3386028 3386217 -5912789 - AluSg SINE Alu -121 189 1 2216 143 0 3 chrX_random 3386218 3386567 -5912439 - L1PA13 LINE L1 -486 5679 5332 1636 175 10 22 chrX_random 3386557 3386687 -5912319 + L1PA13 LINE L1 5696 5826 -337 * 2237 91 3 3 chrX_random 3386687 3386995 -5912011 + AluSp SINE Alu 1 308 -5 1636 175 10 22 chrX_random 3386995 3387178 -5911828 + L1PA13 LINE L1 5826 6005 -158 1845 133 6 47 chrX_random 3387184 3387501 -5911505 - AluSx SINE Alu -8 304 1 411 231 71 71 chrX_random 3387505 3387674 -5911332 - MLT1B LTR MaLR -219 171 3 2239 93 3 3 chrX_random 3387789 3388089 -5910917 + AluSx SINE Alu 1 300 -12 618 82 59 12 chrX_random 3388609 3388779 -5910227 + (TAGA)n Simple_repeat Simple_repeat 1 178 0 301 118 56 45 chrX_random 3388808 3388986 -5910020 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 480 121 40 29 chrX_random 3389026 3389200 -5909806 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 573 115 41 25 chrX_random 3389244 3389495 -5909511 + (TAGA)n Simple_repeat Simple_repeat 1 255 0 1089 257 70 3 chrX_random 3389495 3389826 -5909180 - MLT1C LTR MaLR -56 411 59 187 382 47 29 chrX_random 3389911 3390081 -5908925 - L2 LINE L2 -643 2671 2499 364 221 13 0 chrX_random 3390130 3390207 -5908799 - MER20 DNA MER1_type -141 78 1 237 163 0 0 chrX_random 3390237 3390286 -5908720 + GA-rich Low_complexity Low_complexity 2 50 0 613 154 32 15 chrX_random 3390291 3390829 -5908177 + (TAGA)n Simple_repeat Simple_repeat 1 547 0 378 199 17 33 chrX_random 3390862 3391043 -5907963 + (TAGA)n Simple_repeat Simple_repeat 1 178 0 198 71 0 0 chrX_random 3391063 3391091 -5907915 + (TAGG)n Simple_repeat Simple_repeat 4 31 0 304 272 143 57 chrX_random 3391143 3391444 -5907562 + L1MEc LINE L1 840 1166 -5230 1917 111 0 7 chrX_random 3391526 3391805 -5907201 + AluSg SINE Alu 1 277 -33 1684 144 49 3 chrX_random 3591871 3592197 -5706809 + MLT1A1 LTR MaLR 25 365 0 603 211 23 11 chrX_random 3593923 3594098 -5704908 + GA-rich Low_complexity Low_complexity 1 177 0 284 299 19 9 chrX_random 3594111 3594218 -5704788 - LTR16C LTR ERVL 0 491 384 22 56 0 0 chrX_random 3595569 3595605 -5703401 + AT_rich Low_complexity Low_complexity 1 36 0 349 278 123 31 chrX_random 3596115 3596342 -5702664 - LTR16C LTR ERVL 0 491 244 601 189 0 117 chrX_random 3596883 3597089 -5701917 - L1PBa LINE L1 -1558 5304 5123 9460 177 32 28 chrX_random 3597092 3599512 -5699494 - L1PBa LINE L1 -1949 4913 2207 2403 98 0 3 chrX_random 3599512 3599819 -5699187 - AluSc SINE Alu -3 306 1 9460 177 32 28 chrX_random 3599819 3601397 -5697609 - L1PBa LINE L1 -4655 2207 636 918 200 15 0 chrX_random 3601399 3601594 -5697412 - L1PBa LINE L1 -6663 200 3 305 104 0 0 chrX_random 3602969 3603017 -5695989 - MLT2B1 LTR ERVL 0 520 473 234 147 44 0 chrX_random 3603017 3603085 -5695921 + (TCTA)n Simple_repeat Simple_repeat 1 71 0 716 240 54 104 chrX_random 3603144 3603461 -5695545 - MLT2B1 LTR ERVL -43 477 177 23 0 0 0 chrX_random 3605301 3605324 -5693682 + AT_rich Low_complexity Low_complexity 1 23 0 323 262 39 39 chrX_random 3605602 3605705 -5693301 - MIR SINE MIR -116 146 44 207 0 0 0 chrX_random 3606058 3606081 -5692925 + (CA)n Simple_repeat Simple_repeat 1 23 0 1546 166 19 28 chrX_random 3606251 3606570 -5692436 - L1MC1 LINE L1 -15 6318 6003 257 292 79 0 chrX_random 3606614 3606703 -5692303 + MIR3 SINE MIR 108 203 -5 2191 123 3 0 chrX_random 3607632 3607924 -5691082 - AluSx SINE Alu -19 293 1 405 225 72 77 chrX_random 3608048 3608270 -5690736 - MER106A DNA MER1_type -15 221 1 180 179 0 0 chrX_random 3608536 3608575 -5690431 + (TGAA)n Simple_repeat Simple_repeat 1 39 0 260 120 20 0 chrX_random 3609434 3609484 -5689522 + (TA)n Simple_repeat Simple_repeat 2 52 0 630 204 131 45 chrX_random 3610163 3610339 -5688667 + MER33 DNA MER1_type 5 205 -2380 602 270 108 38 chrX_random 3610339 3610680 -5688326 - MLT1A1 LTR MaLR 0 365 1 630 204 131 45 chrX_random 3610680 3610724 -5688282 + MER33 DNA MER1_type 205 244 -80 1569 242 65 5 chrX_random 3611210 3611640 -5687366 + MLT1F LTR MaLR 87 542 0 357 328 42 36 chrX_random 3611915 3612107 -5686899 - L3 LINE CR1 -4 1573 1381 579 12 38 0 chrX_random 3612962 3613042 -5685964 + (TCTA)n Simple_repeat Simple_repeat 4 86 0 1715 180 3 3 chrX_random 3613042 3613326 -5685680 - AluJo SINE Alu -28 284 1 2449 120 53 16 chrX_random 3613376 3613810 -5685196 + LTR7 LTR ERV1 1 450 0 441 279 156 7 chrX_random 3615150 3615304 -5683702 + MER5A DNA MER1_type 13 189 0 1901 170 0 16 chrX_random 3615378 3615695 -5683311 + AluJo SINE Alu 1 312 0 21 36 0 0 chrX_random 3616873 3616901 -5682105 + AT_rich Low_complexity Low_complexity 1 28 0 1806 140 11 0 chrX_random 3617002 3617267 -5681739 + AluJb SINE Alu 36 303 -9 21 0 0 0 chrX_random 3617402 3617423 -5681583 + AT_rich Low_complexity Low_complexity 1 21 0 699 197 8 0 chrX_random 3617640 3617772 -5681234 - FLAM_A SINE Alu 0 133 1 841 194 69 103 chrX_random 3618470 3618702 -5680304 + MLT1D LTR MaLR 228 488 -16 1277 210 91 11 chrX_random 3618793 3619079 -5679927 - AluJo SINE Alu -3 309 1 3832 151 17 5 chrX_random 3619795 3620437 -5678569 + MER39B LTR ERV1 1 650 -3 2353 143 22 3 chrX_random 3620437 3620794 -5678212 + THE1B LTR MaLR 1 364 0 2250 114 34 14 chrX_random 3621253 3621611 -5677395 + MLT1A1 LTR MaLR 1 365 0 183 303 9 128 chrX_random 3622057 3622114 -5676892 - L2 LINE L2 -19 3253 3213 597 229 16 6 chrX_random 3622114 3622297 -5676709 - MER53 DNA DNA -1 188 4 183 303 9 128 chrX_random 3622297 3622348 -5676658 - L2 LINE L2 -59 3213 3158 246 169 0 0 chrX_random 3623109 3623162 -5675844 - MLT2C1 LTR ERVL -3 507 349 207 204 0 0 chrX_random 3623184 3623228 -5675778 + (TG)n Simple_repeat Simple_repeat 2 45 0 2005 171 50 41 chrX_random 3623241 3623704 -5675302 - MLT2B1 LTR ERVL -44 476 10 373 209 33 22 chrX_random 3623729 3623820 -5675186 - MER5A DNA MER1_type -85 104 13 222 356 45 15 chrX_random 3624282 3624414 -5674592 - MIR3 SINE MIR -63 145 10 338 103 51 0 chrX_random 3625445 3625523 -5673483 + (TCTA)n Simple_repeat Simple_repeat 2 83 0 2180 123 0 0 chrX_random 3625577 3625877 -5673129 - AluSx SINE Alu -12 300 1 1745 171 4 4 chrX_random 3626097 3626378 -5672628 + AluJo SINE Alu 6 286 -26 23 0 0 0 chrX_random 3626386 3626409 -5672597 + AT_rich Low_complexity Low_complexity 1 23 0 288 347 41 34 chrX_random 3626593 3626740 -5672266 + L2 LINE L2 2874 3021 -292 1412 182 15 52 chrX_random 3626791 3627115 -5671891 - AluJb SINE Alu 0 312 1 272 342 0 0 chrX_random 3627187 3627266 -5671740 + L2 LINE L2 3235 3313 0 243 125 0 0 chrX_random 3627852 3627892 -5671114 + (GGA)n Simple_repeat Simple_repeat 2 41 0 213 261 29 29 chrX_random 3628248 3628313 -5670693 - L2 LINE L2 -4 3309 3244 734 9 47 9 chrX_random 3628313 3628419 -5670587 + (GAAA)n Simple_repeat Simple_repeat 1 110 0 2079 124 0 7 chrX_random 3628995 3629286 -5669720 + AluSx SINE Alu 1 289 -23 2015 144 82 10 chrX_random 3629320 3629708 -5669298 + MSTA LTR MaLR 1 416 -12 1425 217 48 46 chrX_random 3629887 3630181 -5668825 - MLT1C LTR MaLR 0 467 170 1645 167 22 29 chrX_random 3630181 3630493 -5668513 - AluJo SINE Alu -2 310 1 1425 217 48 46 chrX_random 3630493 3630659 -5668347 - MLT1C LTR MaLR -297 170 6 225 273 0 0 chrX_random 3630818 3630873 -5668133 - MER81 DNA DNA -56 58 4 806 306 105 37 chrX_random 3631932 3632047 -5666959 - L2 LINE L2 -4 3309 3203 1673 146 4 15 chrX_random 3632047 3632308 -5666698 + AluJo SINE Alu 1 258 -54 806 306 105 37 chrX_random 3632308 3632938 -5666068 - L2 LINE L2 -110 3203 2503 1435 224 64 64 chrX_random 3633510 3633996 -5665010 - MER21B LTR ERV1 -108 755 270 619 308 128 0 chrX_random 3636252 3636463 -5662543 - MIR SINE MIR -6 256 19 205 222 19 0 chrX_random 3636624 3636678 -5662328 + A-rich Low_complexity Low_complexity 5 59 0 492 346 74 17 chrX_random 3637349 3637580 -5661426 + MIR SINE MIR 19 262 0 192 77 0 0 chrX_random 3638066 3638092 -5660914 + (TC)n Simple_repeat Simple_repeat 1 26 0 215 260 62 21 chrX_random 3638325 3638421 -5660585 - L2 LINE L2 0 3272 3173 205 125 21 21 chrX_random 3639089 3639137 -5659869 + (TA)n Simple_repeat Simple_repeat 2 49 0 290 250 11 33 chrX_random 3640032 3640124 -5658882 - LTR16C LTR ERVL 0 491 402 2054 116 4 0 chrX_random 3640530 3640807 -5658199 - AluSx SINE Alu -6 306 29 343 299 90 22 chrX_random 3641293 3641427 -5657579 - MIR SINE MIR -114 148 6 280 289 33 0 chrX_random 3642935 3643025 -5655981 + L1MC4a LINE L1 5720 5812 -1996 180 0 0 0 chrX_random 3643026 3643046 -5655960 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 341 200 47 59 chrX_random 3643104 3643189 -5655817 + L1MC4a LINE L1 5990 6073 -1735 698 118 0 0 chrX_random 3643444 3643546 -5655460 - AluJ/FLAM SINE Alu -210 102 1 207 210 32 16 chrX_random 3643593 3643655 -5655351 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 205 361 30 38 chrX_random 3643661 3643794 -5655212 + L2 LINE L2 3141 3272 0 180 0 0 0 chrX_random 3644242 3644262 -5654744 + (A)n Simple_repeat Simple_repeat 1 20 0 585 133 29 0 chrX_random 3644722 3644827 -5654179 - L1MA7 LINE L1 -3 6288 6181 373 238 171 6 chrX_random 3645092 3645256 -5653750 + LTR16A1 LTR ERVL 266 456 -1 251 325 67 17 chrX_random 3645398 3645518 -5653488 + MIR SINE MIR 100 225 -37 425 134 12 37 chrX_random 3645892 3645974 -5653032 + Tigger2a DNA MER2_type 1 80 -354 3319 150 108 2 chrX_random 3645974 3646842 -5652164 - LTR28 LTR ERV1 0 1020 1 2183 122 46 30 chrX_random 3646842 3646974 -5652032 + Tigger2a DNA MER2_type 76 204 -2514 2319 72 3 3 chrX_random 3646974 3647266 -5651740 - AluY SINE Alu -19 292 1 2183 122 46 30 chrX_random 3647266 3647486 -5651520 + Tigger2a DNA MER2_type 204 434 -10 1600 146 57 31 chrX_random 3647675 3648064 -5650942 - L1MA8 LINE L1 -126 6040 5609 1211 176 33 0 chrX_random 3648066 3648310 -5650696 + L1MA6 LINE L1 6049 6300 0 249 108 0 0 chrX_random 3650832 3650869 -5648137 + (TG)n Simple_repeat Simple_repeat 1 37 0 279 0 0 0 chrX_random 3652402 3652433 -5646573 + (TG)n Simple_repeat Simple_repeat 2 32 0 1880 251 40 19 chrX_random 3652792 3653315 -5645691 - MLT1F1 LTR MaLR 0 567 34 949 175 0 2 chrX_random 3653319 3653553 -5645453 + AluJo SINE Alu 1 282 -30 315 0 0 0 chrX_random 3653559 3653594 -5645412 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 229 163 0 23 chrX_random 3653594 3653637 -5645369 - MLT1F1 LTR MaLR -525 42 1 212 167 0 19 chrX_random 3653851 3653905 -5645101 + (CA)n Simple_repeat Simple_repeat 2 54 0 227 152 0 0 chrX_random 3654100 3654146 -5644860 - L1MC4 LINE L1 -1339 6703 6658 313 21 21 21 chrX_random 3654193 3654240 -5644766 + (TA)n Simple_repeat Simple_repeat 2 48 0 * 342 0 0 0 chrX_random 3654239 3654277 -5644729 + (GA)n Simple_repeat Simple_repeat 2 39 0 2489 251 46 7 chrX_random 3654283 3654892 -5644114 + MER82 DNA MER2_type 10 642 -11 361 295 93 21 chrX_random 3654907 3655100 -5643906 - HAL1 LINE L1 -1074 1433 1227 980 63 0 0 chrX_random 3655271 3655398 -5643608 + AluY SINE Alu 183 309 -2 689 77 0 0 chrX_random 3655417 3655508 -5643498 + L1M1 LINE L1 5727 5817 -488 197 65 32 0 chrX_random 3655515 3655546 -5643460 + (CA)n Simple_repeat Simple_repeat 1 32 0 339 237 61 18 chrX_random 3656814 3656928 -5642078 + LTR50 LTR ERVL 565 683 -112 1210 225 37 4 chrX_random 3656935 3657179 -5641827 + MLT1E LTR MaLR 340 591 -2 360 291 160 29 chrX_random 3657339 3657545 -5641461 + MIR SINE MIR 28 260 -2 1710 144 4 4 chrX_random 3657779 3658057 -5640949 - L1PA15 LINE L1 -1 6164 5887 3245 153 32 18 chrX_random 3658181 3658497 -5640509 + MER7C DNA MER2_type 27 356 -2672 2499 110 31 8 chrX_random 3658497 3658853 -5640153 - THE1B LTR MaLR 0 364 1 3245 153 32 18 chrX_random 3658853 3659104 -5639902 + MER7C DNA MER2_type 356 602 0 761 239 8 86 chrX_random 3659799 3659895 -5639111 + MER58A DNA MER1_type 1 103 -2317 2281 81 0 16 chrX_random 3659895 3660202 -5638804 - AluSx SINE Alu -10 302 1 761 239 8 86 chrX_random 3660202 3660348 -5638658 + MER58A DNA MER1_type 103 224 0 5598 90 11 18 chrX_random 3661121 3661186 -5637820 - L1MA1 LINE L1 -4 6298 6234 2154 133 36 30 chrX_random 3661186 3661548 -5637458 + THE1B LTR MaLR 1 364 0 5598 90 11 18 chrX_random 3661548 3662312 -5636694 - L1MA1 LINE L1 -68 6234 5475 561 146 0 0 chrX_random 3662344 3662426 -5636580 - L1PA15-16 LINE L1 -5904 945 864 1989 138 10 0 chrX_random 3666833 3667130 -5631876 + AluJb SINE Alu 1 300 -12 1039 65 12 24 chrX_random 3667248 3667417 -5631589 + (TTTC)n Simple_repeat Simple_repeat 2 168 0 1796 123 7 18 chrX_random 3667423 3667699 -5631307 - AluSx SINE Alu -35 277 5 521 175 103 0 chrX_random 3668612 3668738 -5630268 - MER106B DNA MER1_type -15 1044 906 192 200 0 0 chrX_random 3670721 3670766 -5628240 + (TA)n Simple_repeat Simple_repeat 1 45 0 311 272 0 43 chrX_random 3670772 3670864 -5628142 - L1MC4 LINE L1 -1339 6703 6616 388 224 0 9 chrX_random 3670869 3670985 -5628021 + (TA)n Simple_repeat Simple_repeat 2 116 0 181 116 23 23 chrX_random 3671100 3671143 -5627863 + (CA)n Simple_repeat Simple_repeat 2 44 0 26 50 0 0 chrX_random 3672343 3672383 -5626623 + AT_rich Low_complexity Low_complexity 1 40 0 186 324 14 14 chrX_random 3672925 3672996 -5626010 + MIR SINE MIR 20 90 -172 246 128 0 0 chrX_random 3673324 3673363 -5625643 + (A)n Simple_repeat Simple_repeat 1 39 0 722 312 17 13 chrX_random 3674032 3674263 -5624743 - MLT1E3 LTR MaLR -26 567 336 415 237 0 0 chrX_random 3674297 3674390 -5624616 - L1MA4A LINE L1 -23 6280 6188 582 166 79 0 chrX_random 3674394 3674533 -5624473 - L1MA4A LINE L1 -182 6121 5972 1057 229 50 21 chrX_random 3674636 3674876 -5624130 - MLT1E3 LTR MaLR -377 247 1 457 254 133 29 chrX_random 3675965 3676244 -5622762 + MLT1H LTR MaLR 205 512 -37 229 345 95 27 chrX_random 3676399 3676735 -5622271 + L2 LINE L2 2457 2815 -499 1955 154 19 16 chrX_random 3677134 3677511 -5621495 - L1MA8 LINE L1 -11 6280 5903 366 276 18 80 chrX_random 3677723 3677886 -5621120 - MARNA DNA Mariner -373 213 61 247 65 43 0 chrX_random 3679017 3679063 -5619943 + T-rich Low_complexity Low_complexity 1 48 0 2062 267 57 50 chrX_random 3679282 3679469 -5619537 - L1ME3 LINE L1 -7 6155 5971 7092 57 0 11 chrX_random 3679469 3680603 -5618403 - L1PA5 LINE L1 0 6154 5026 2062 267 57 50 chrX_random 3680603 3682343 -5616663 - L1ME3 LINE L1 -191 5971 4196 4238 18 0 0 chrX_random 3682346 3682861 -5616145 + L1P LINE L1 2783 3297 -2849 899 191 0 6 chrX_random 3684123 3684285 -5614721 + FRAM SINE Alu 2 162 -4 333 0 0 0 chrX_random 3685217 3685254 -5613752 + (TAAA)n Simple_repeat Simple_repeat 4 40 0 236 399 25 15 chrX_random 3685606 3685809 -5613197 + L2 LINE L2 1819 2023 -1291 297 0 0 0 chrX_random 3686280 3686313 -5612693 + (CA)n Simple_repeat Simple_repeat 1 33 0 186 356 44 11 chrX_random 3686328 3686418 -5612588 - L2 LINE L2 -46 3226 3134 2059 147 20 42 chrX_random 3686627 3686982 -5612024 + THE1B LTR MaLR 1 347 -17 510 31 0 0 chrX_random 3687007 3687071 -5611935 + (TG)n Simple_repeat Simple_repeat 2 65 0 1585 196 32 3 chrX_random 3687092 3687403 -5611603 - MLT2D LTR ERVL -94 320 1 25 0 0 0 chrX_random 3688269 3688294 -5610712 + AT_rich Low_complexity Low_complexity 1 25 0 2507 31 0 3 chrX_random 3688662 3688990 -5610016 - AluY SINE Alu 0 327 1 21 57 0 0 chrX_random 3688995 3689030 -5609976 + AT_rich Low_complexity Low_complexity 1 35 0 22 0 0 0 chrX_random 3689391 3689413 -5609593 + AT_rich Low_complexity Low_complexity 1 22 0 960 279 126 20 chrX_random 3689446 3690130 -5608876 - L1ME2 LINE L1 -213 6020 5266 314 230 0 40 chrX_random 3690141 3690241 -5608765 - L1ME3 LINE L1 0 6162 6067 * 1386 212 83 50 chrX_random 3690238 3690384 -5608622 - L1ME2 LINE L1 -4128 2268 2128 3552 157 54 6 chrX_random 3690384 3691047 -5607959 - L1PB4 LINE L1 -5 6151 5457 1386 212 83 50 chrX_random 3691047 3691395 -5607611 - L1ME2 LINE L1 -4268 2128 1758 25 31 0 0 chrX_random 3691501 3691533 -5607473 + AT_rich Low_complexity Low_complexity 1 32 0 297 348 203 0 chrX_random 3691675 3691882 -5607124 + MIR SINE MIR 7 255 -7 254 353 58 13 chrX_random 3692137 3692293 -5606713 + MIR3 SINE MIR 45 207 -1 2301 81 7 3 chrX_random 3692400 3692698 -5606308 + AluSg1 SINE Alu 1 299 -10 2148 113 30 0 chrX_random 3694032 3694332 -5604674 - AluSx SINE Alu -3 309 1 326 290 110 21 chrX_random 3696049 3696194 -5602812 - MIR3 SINE MIR -6 202 45 1864 88 0 8 chrX_random 3696513 3696776 -5602230 + L1PB1 LINE L1 5890 6150 -1 202 216 0 0 chrX_random 3699546 3699583 -5599423 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 245 375 69 41 chrX_random 3699762 3700007 -5598999 - L2 LINE L2 -211 3061 2810 302 285 103 53 chrX_random 3700210 3700491 -5598515 - L2 LINE L2 -892 2422 2128 219 179 39 39 chrX_random 3700994 3701092 -5597914 + (TTTAA)n Simple_repeat Simple_repeat 1 98 0 218 254 45 15 chrX_random 3701292 3701359 -5597647 + MIR3 SINE MIR 86 154 -54 360 294 10 20 chrX_random 3701431 3701533 -5597473 + MER5A DNA MER1_type 63 163 -26 185 336 22 52 chrX_random 3703097 3703231 -5595775 + L2 LINE L2 2748 2877 -437 202 371 95 0 chrX_random 3703452 3703557 -5595449 + L2 LINE L2 3133 3247 -25 28 48 0 0 chrX_random 3703583 3703625 -5595381 + AT_rich Low_complexity Low_complexity 1 42 0 531 222 124 26 chrX_random 3704093 3704246 -5594760 + MER5B DNA MER1_type 7 174 -4 214 354 0 0 chrX_random 3704266 3704331 -5594675 - MER5A DNA MER1_type 0 189 125 1381 258 69 82 chrX_random 3704610 3705208 -5593798 + MLT1E LTR MaLR 3 592 -1 3057 96 12 0 chrX_random 3706246 3706651 -5592355 + MLT2A2 LTR ERVL 1 410 -43 182 114 0 105 chrX_random 3706758 3706863 -5592143 + (TA)n Simple_repeat Simple_repeat 2 95 0 335 60 40 0 chrX_random 3706897 3706947 -5592059 + MLT2A2 LTR ERVL 393 444 0 21 0 0 0 chrX_random 3707606 3707627 -5591379 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chrX_random 3707766 3707787 -5591219 + AT_rich Low_complexity Low_complexity 1 21 0 214 125 23 45 chrX_random 3707955 3708043 -5590963 + (TTA)n Simple_repeat Simple_repeat 1 86 0 3556 69 4 0 chrX_random 3709469 3709920 -5589086 + MLT2A2 LTR ERVL 1 453 0 1329 239 161 40 chrX_random 3709922 3710419 -5588587 + MLT1E2 LTR MaLR 69 625 -1 2321 155 45 24 chrX_random 3711492 3711917 -5587089 + Tigger2a DNA MER2_type 1 434 0 2199 99 3 3 chrX_random 3712355 3712694 -5586312 + AluSx SINE Alu 1 339 0 221 310 28 0 chrX_random 3713021 3713092 -5585914 - MIR3 SINE MIR -28 180 108 28 61 0 0 chrX_random 3713207 3713256 -5585750 + AT_rich Low_complexity Low_complexity 1 49 0 21 0 0 0 chrX_random 3713312 3713333 -5585673 + AT_rich Low_complexity Low_complexity 1 21 0 376 248 18 26 chrX_random 3713902 3714015 -5584991 - ORSL DNA AcHobo -26 249 138 270 200 91 0 chrX_random 3714253 3714418 -5584588 + (TA)n Simple_repeat Simple_repeat 1 180 0 313 189 31 44 chrX_random 3714445 3714604 -5584402 + (TTATA)n Simple_repeat Simple_repeat 5 161 0 231 238 30 20 chrX_random 3714653 3714754 -5584252 + (TATAA)n Simple_repeat Simple_repeat 5 106 0 202 123 74 31 chrX_random 3714754 3714917 -5584089 + (TA)n Simple_repeat Simple_repeat 1 170 0 200 141 44 30 chrX_random 3714977 3715112 -5583894 + (TATAA)n Simple_repeat Simple_repeat 1 137 0 1375 232 37 3 chrX_random 3715323 3715780 -5583226 + MLT1D LTR MaLR 1 503 -2 233 216 0 0 chrX_random 3715782 3715833 -5583173 + (TGAA)n Simple_repeat Simple_repeat 3 53 0 13560 128 90 3 chrX_random 3716000 3718223 -5580783 + Tigger1 DNA MER2_type 2 2418 0 341 277 5 101 chrX_random 3718766 3718954 -5580052 + MER5B DNA MER1_type 3 172 -6 376 68 102 0 chrX_random 3719752 3719811 -5579195 + MADE1 DNA Mariner 13 77 -3 1002 164 41 75 chrX_random 3719811 3720079 -5578927 - L1MA8 LINE L1 -17 6274 6016 23 68 0 0 chrX_random 3721091 3721135 -5577871 + AT_rich Low_complexity Low_complexity 1 44 0 2024 126 7 13 chrX_random 3721402 3721704 -5577302 - AluSx SINE Alu -12 300 1 282 333 125 6 chrX_random 3722431 3722599 -5576407 - MIR SINE MIR -17 245 58 251 341 44 0 chrX_random 3723281 3723372 -5575634 + MIR3 SINE MIR 111 205 -3 2668 23 0 3 chrX_random 3723813 3724114 -5574892 + AluY SINE Alu 1 300 -11 553 135 11 28 chrX_random 3724420 3724589 -5574417 + GA-rich Low_complexity Low_complexity 1 166 0 3123 107 10 33 chrX_random 3724589 3724742 -5574264 + L1PB1 LINE L1 5652 5807 -371 471 78 0 0 chrX_random 3724742 3724806 -5574200 + (TG)n Simple_repeat Simple_repeat 2 65 0 3123 107 10 33 chrX_random 3724806 3725191 -5573815 + L1PB1 LINE L1 5807 6178 0 637 274 33 37 chrX_random 3725638 3725853 -5573153 + L2 LINE L2 1769 1982 -1332 22 35 0 0 chrX_random 3726232 3726261 -5572745 + AT_rich Low_complexity Low_complexity 1 29 0 223 217 0 67 chrX_random 3727645 3727705 -5571301 - L2 LINE L2 -1 3271 3216 191 231 0 13 chrX_random 3729214 3729292 -5569714 + GA-rich Low_complexity Low_complexity 1 77 0 558 101 21 69 chrX_random 3729960 3730149 -5568857 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 2395 67 0 16 chrX_random 3730254 3730585 -5568421 + AluY SINE Alu 1 311 0 186 379 0 0 chrX_random 3730589 3730655 -5568351 - L2 LINE L2 -340 2974 2909 1078 147 51 0 chrX_random 3730782 3730979 -5568027 - L1MA8 LINE L1 -1 6290 6084 28 71 0 0 chrX_random 3731217 3731273 -5567733 + AT_rich Low_complexity Low_complexity 1 56 0 1954 118 0 0 chrX_random 3731333 3731595 -5567411 + AluSx SINE Alu 6 267 -45 297 37 0 56 chrX_random 3731603 3731657 -5567349 + (CAAAA)n Simple_repeat Simple_repeat 2 52 0 1506 204 25 30 chrX_random 3732138 3732500 -5566506 + MLT1A1 LTR MaLR 1 360 -5 3923 120 15 3 chrX_random 3732997 3733590 -5565416 - LTR43 LTR ERV1 -2 600 1 1529 201 19 10 chrX_random 3734256 3734564 -5564442 + AluJo SINE Alu 2 312 0 2171 120 7 3 chrX_random 3736129 3736430 -5562576 - AluSx SINE Alu -10 302 1 355 327 59 40 chrX_random 3736643 3736946 -5562060 - L1ME4a LINE L1 -24 6097 5789 2083 214 50 60 chrX_random 3737121 3737739 -5561267 - LTR9 LTR ERV1 0 612 1 1967 165 66 55 chrX_random 3737949 3738404 -5560602 - LTR2B LTR ERV1 0 490 31 1554 0 0 0 chrX_random 3738913 3739080 -5559926 - AluYa5 SINE Alu -7 304 138 2022 136 3 0 chrX_random 3739369 3739677 -5559329 - AluSx SINE Alu -3 309 1 1002 266 100 59 chrX_random 3740863 3741721 -5557285 - L1MC5 LINE L1 -426 7535 6643 349 310 5 11 chrX_random 3742647 3742834 -5556172 - L1M4 LINE L1 -2192 3954 3769 2280 85 0 3 chrX_random 3743163 3743469 -5555537 - AluSq SINE Alu 0 307 3 28 29 0 0 chrX_random 3745192 3745227 -5553779 + AT_rich Low_complexity Low_complexity 1 35 0 243 0 0 0 chrX_random 3745460 3745487 -5553519 + (CAAAAA)n Simple_repeat Simple_repeat 3 29 0 305 241 97 28 chrX_random 3745686 3745831 -5553175 - MLT1J2 LTR MaLR -225 225 71 345 82 0 0 chrX_random 3746057 3746106 -5552900 + (CA)n Simple_repeat Simple_repeat 1 49 0 2288 204 38 32 chrX_random 3746554 3747109 -5551897 + MER74A LTR ERVL 1 558 0 338 290 26 16 chrX_random 3747182 3747375 -5551631 + MERVL LTR ERVL 3737 3931 -1554 26 50 0 0 chrX_random 3747457 3747497 -5551509 + AT_rich Low_complexity Low_complexity 1 40 0 1664 183 0 32 chrX_random 3747497 3747809 -5551197 - AluJo SINE Alu -10 302 1 22 0 0 0 chrX_random 3747863 3747885 -5551121 + AT_rich Low_complexity Low_complexity 1 22 0 407 210 136 2 chrX_random 3748256 3748429 -5550577 + MER8 DNA MER2_type 1 239 0 1632 189 20 30 chrX_random 3748448 3748845 -5550161 + L1MC2 LINE L1 5944 6336 -8 198 317 48 19 chrX_random 3750396 3750492 -5548514 + L2 LINE L2 1607 1699 -1615 342 0 0 0 chrX_random 3750492 3750530 -5548476 + (CA)n Simple_repeat Simple_repeat 1 38 0 198 317 48 19 chrX_random 3750530 3750641 -5548365 + L2 LINE L2 1699 1820 -1494 5149 94 18 0 chrX_random 3750733 3751458 -5547548 + L1PA11 LINE L1 5435 6172 -2 29 0 0 0 chrX_random 3751585 3751614 -5547392 + AT_rich Low_complexity Low_complexity 1 29 0 1915 130 7 32 chrX_random 3751891 3752199 -5546807 + AluJo SINE Alu 1 300 -12 2316 88 3 3 chrX_random 3753724 3754018 -5544988 - AluSg SINE Alu -16 294 1 1697 234 67 49 chrX_random 3755256 3755476 -5543530 + MLT1E2 LTR MaLR 1 216 -410 2230 106 3 19 chrX_random 3755476 3755788 -5543218 + AluSg SINE Alu 1 307 -3 1697 234 67 49 chrX_random 3755788 3756181 -5542825 + MLT1E2 LTR MaLR 216 625 -1 2375 136 54 2 chrX_random 3756194 3756599 -5542407 + MSTB LTR MaLR 1 426 0 908 223 5 0 chrX_random 3756747 3756931 -5542075 + MER58A DNA MER1_type 37 221 -3 1624 199 75 27 chrX_random 3757698 3758041 -5540965 + L1MC3 LINE L1 7315 7685 -100 3080 97 14 0 chrX_random 3758041 3758486 -5540520 + L1PA13 LINE L1 5712 6162 -1 1624 199 75 27 chrX_random 3758486 3758585 -5540421 + L1MC3 LINE L1 7685 7778 -7 242 274 116 21 chrX_random 3759047 3759142 -5539864 + MIR3 SINE MIR 82 185 -23 1209 169 39 11 chrX_random 3759560 3759839 -5539167 + MER33 DNA MER1_type 1 287 -37 679 212 49 44 chrX_random 3765806 3766009 -5532997 - MER3 DNA MER1_type -5 204 1 24 0 0 0 chrX_random 3766693 3766717 -5532289 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chrX_random 3766774 3766796 -5532210 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chrX_random 3768545 3768568 -5530438 + AT_rich Low_complexity Low_complexity 1 23 0 2010 137 4 0 chrX_random 3768680 3768958 -5530048 - AluSq SINE Alu -34 279 1 307 62 0 141 chrX_random 3769492 3769556 -5529450 - MLT2B1 LTR ERVL 0 520 466 825 75 50 15 chrX_random 3769563 3769885 -5529121 + (TA)n Simple_repeat Simple_repeat 1 333 0 309 292 10 10 chrX_random 3769914 3770010 -5528996 + L2 LINE L2 2554 2649 -665 213 247 12 49 chrX_random 3770360 3770441 -5528565 + L2 LINE L2 3158 3235 -78 22 94 0 0 chrX_random 3770460 3770524 -5528482 + AT_rich Low_complexity Low_complexity 1 64 0 431 100 114 0 chrX_random 3770820 3770890 -5528116 - MADE1 DNA Mariner -2 78 1 2405 70 0 3 chrX_random 3772156 3772458 -5526548 + AluY SINE Alu 1 301 -10 253 262 19 160 chrX_random 3772760 3772966 -5526040 + MIR SINE MIR 49 225 -37 1232 201 16 12 chrX_random 3772970 3773219 -5525787 - AluJo SINE Alu -8 304 55 669 336 47 14 chrX_random 3773219 3773854 -5525152 + HERV17 LTR ERV1 3304 4630 -1114 440 342 35 14 chrX_random 3774091 3774462 -5524544 + HERV17 LTR ERV1 4572 4950 -2806 492 315 14 60 chrX_random 3774797 3775397 -5523609 + HERV17 LTR ERV1 4549 6482 -1884 1502 56 0 0 chrX_random 3775792 3775987 -5523019 - THE1A LTR MaLR -160 195 1 707 167 6 39 chrX_random 3775991 3776147 -5522859 - L1M1 LINE L1 -7397 168 18 345 91 36 0 chrX_random 3776161 3776216 -5522790 - L1 LINE L1 -1379 4767 4711 1454 163 33 7 chrX_random 3776224 3776500 -5522506 - Tigger1 DNA MER2_type -2135 283 1 3877 185 44 13 chrX_random 3776594 3777117 -5521889 + L1MA4A LINE L1 4492 4998 -1307 1924 138 3 35 chrX_random 3777117 3777428 -5521578 + AluSx SINE Alu 1 301 -11 3877 185 44 13 chrX_random 3777428 3778044 -5520962 + L1MA4A LINE L1 4998 5699 -606 195 42 0 0 chrX_random 3778044 3778068 -5520938 + (GA)n Simple_repeat Simple_repeat 1 24 0 3877 185 44 13 chrX_random 3778068 3778432 -5520574 + L1MA4A LINE L1 5699 6050 -255 296 217 36 0 chrX_random 3778425 3778508 -5520498 + L1MB4 LINE L1 6094 6179 -1 * 1166 189 23 11 chrX_random 3779654 3780109 -5518897 - L1M2 LINE L1 -611 5689 5158 338 136 11 91 chrX_random 3780109 3780197 -5518809 + MLT2C1 LTR ERVL 260 340 -57 21 36 0 0 chrX_random 3780235 3780263 -5518743 + AT_rich Low_complexity Low_complexity 1 28 0 207 0 0 0 chrX_random 3780263 3780286 -5518720 + (CA)n Simple_repeat Simple_repeat 2 24 0 5458 140 5 5 chrX_random 3782148 3783035 -5515971 - Tigger1 DNA MER2_type -466 1952 1066 233 56 0 28 chrX_random 3783290 3783326 -5515680 + (CCCCCT)n Simple_repeat Simple_repeat 2 36 0 2308 102 51 22 chrX_random 3783327 3783834 -5515172 + pTR5 LTR ERV1 1196 2029 -409 303 221 0 0 chrX_random 3783834 3783911 -5515095 + LTR30 LTR ERV1 548 624 -98 1400 95 29 2 chrX_random 3783911 3784143 -5514863 + pTR5 LTR ERV1 49 392 -2046 324 0 0 0 chrX_random 3784462 3784498 -5514508 + (TG)n Simple_repeat Simple_repeat 2 37 0 207 100 0 0 chrX_random 3785502 3785532 -5513474 + (TG)n Simple_repeat Simple_repeat 2 31 0 2264 128 0 0 chrX_random 3785567 3785879 -5513127 - AluJb SINE Alu 0 312 1 707 191 26 37 chrX_random 3786666 3786855 -5512151 - MER53 DNA DNA -2 187 1 291 291 73 22 chrX_random 3787428 3787607 -5511399 + LTR33A LTR ERVL 303 490 -33 2203 115 3 26 chrX_random 3789448 3789761 -5509245 - AluSx SINE Alu -6 306 1 2724 115 64 2 chrX_random 3790354 3790790 -5508216 - MER4C LTR ERV1 0 465 3 2284 143 18 75 chrX_random 3790916 3791370 -5507636 + MSTC LTR MaLR 1 428 0 274 254 71 76 chrX_random 3791508 3791732 -5507274 - L2 LINE L2 -188 3084 2862 1508 186 0 0 chrX_random 3792525 3792777 -5506229 + AluJo SINE Alu 1 252 -60 26 0 0 0 chrX_random 3792903 3792929 -5506077 + AT_rich Low_complexity Low_complexity 1 26 0 1734 131 22 34 chrX_random 3792946 3793266 -5505740 + THE1C LTR MaLR 1 316 -59 30 0 0 0 chrX_random 3793892 3793922 -5505084 + AT_rich Low_complexity Low_complexity 1 30 0 1093 112 0 0 chrX_random 3793922 3794065 -5504941 - AluSq/x SINE Alu -169 143 1 218 336 18 26 chrX_random 3794346 3794459 -5504547 - MIR SINE MIR -101 161 50 3169 137 8 6 chrX_random 3794684 3795195 -5503811 + MER41E LTR ERV1 1 512 0 2512 152 27 12 chrX_random 3795367 3795846 -5503160 + LTR29 LTR ERV1 137 622 0 1118 113 0 30 chrX_random 3797444 3797637 -5501369 + AluSg/x SINE Alu 117 304 0 213 208 0 0 chrX_random 3797943 3797996 -5501010 + A-rich Low_complexity Low_complexity 4 56 0 463 236 164 7 chrX_random 3797996 3798136 -5500870 - MLT1A2 LTR MaLR -23 351 190 255 79 0 0 chrX_random 3798151 3798189 -5500817 + (GA)n Simple_repeat Simple_repeat 1 38 0 2943 76 40 45 chrX_random 3798241 3798644 -5500362 + MLT2A1 LTR ERVL 1 403 -41 180 0 0 0 chrX_random 3798644 3798664 -5500342 + (TA)n Simple_repeat Simple_repeat 2 21 0 2943 76 40 45 chrX_random 3798664 3798706 -5500300 + MLT2A1 LTR ERVL 403 444 0 3286 59 5 0 chrX_random 3798706 3799132 -5499874 + HERVL-A1 LTR ERVL 1 428 -5226 1275 223 12 22 chrX_random 3799462 3799785 -5499221 - MER7A DNA MER2_type -22 324 7 216 220 20 0 chrX_random 3799961 3800011 -5498995 + (TATG)n Simple_repeat Simple_repeat 4 54 0 1395 205 3 24 chrX_random 3800120 3800413 -5498593 + AluJb SINE Alu 6 292 -20 370 323 121 46 chrX_random 3800486 3801165 -5497841 - L1M4 LINE L1 -1318 4828 4099 4231 103 13 0 chrX_random 3801174 3801787 -5497219 - L1PA13 LINE L1 -1 6162 5542 3122 94 0 33 chrX_random 3801788 3802247 -5496759 + MLT2A1 LTR ERVL 1 444 0 557 119 40 71 chrX_random 3802248 3802374 -5496632 - MLT1A2 LTR MaLR -251 123 2 1806 179 0 14 chrX_random 3803895 3804192 -5494814 - AluJb SINE Alu -19 293 1 272 178 41 0 chrX_random 3804499 3804572 -5494434 + (TA)n Simple_repeat Simple_repeat 1 76 0 24 0 0 0 chrX_random 3805810 3805834 -5493172 + AT_rich Low_complexity Low_complexity 1 24 0 1322 277 72 14 chrX_random 3806623 3807110 -5491896 - MLT2B2 LTR ERVL 0 515 1 271 248 142 92 chrX_random 3807127 3807268 -5491738 - MIR SINE MIR -114 148 1 911 218 29 4 chrX_random 3808251 3808494 -5490512 + L1 LINE L1 5024 5272 -874 198 0 0 0 chrX_random 3808529 3808551 -5490455 + (GA)n Simple_repeat Simple_repeat 2 23 0 201 74 0 0 chrX_random 3808578 3808605 -5490401 + (TTA)n Simple_repeat Simple_repeat 2 28 0 2322 88 14 0 chrX_random 3809486 3809783 -5489223 + AluSx SINE Alu 1 301 -11 204 252 9 45 chrX_random 3810228 3810339 -5488667 + A-rich Low_complexity Low_complexity 4 110 0 341 309 61 44 chrX_random 3810397 3811057 -5487949 + L1M4 LINE L1 2248 2918 -3228 21 0 0 0 chrX_random 3811156 3811177 -5487829 + AT_rich Low_complexity Low_complexity 1 21 0 414 0 0 0 chrX_random 3811229 3811275 -5487731 + (TG)n Simple_repeat Simple_repeat 1 46 0 264 253 13 0 chrX_random 3811339 3811418 -5487588 + L1MC5 LINE L1 7809 7888 -73 436 332 89 45 chrX_random 3811560 3811964 -5487042 - L1MC4a LINE L1 -1866 5942 5521 3951 97 2 25 chrX_random 3812403 3813029 -5485977 + L1PB1 LINE L1 5575 6151 0 4612 115 16 18 chrX_random 3813255 3813666 -5485340 + L1PB1 LINE L1 5383 5793 -358 180 0 0 0 chrX_random 3813666 3813686 -5485320 + (TA)n Simple_repeat Simple_repeat 2 21 0 4612 115 16 18 chrX_random 3813686 3814045 -5484961 + L1PB1 LINE L1 5793 6151 0 29 0 0 0 chrX_random 3814045 3814074 -5484932 + AT_rich Low_complexity Low_complexity 1 29 0 821 137 8 15 chrX_random 3814545 3814676 -5484330 + FLAM_C SINE Alu 1 130 -13 27 0 0 0 chrX_random 3814678 3814705 -5484301 + AT_rich Low_complexity Low_complexity 1 27 0 21 57 0 0 chrX_random 3815785 3815820 -5483186 + AT_rich Low_complexity Low_complexity 1 35 0 1050 214 42 5 chrX_random 3816042 3816257 -5482749 + MER58A DNA MER1_type 2 224 0 782 186 36 78 chrX_random 3816268 3816390 -5482616 - MER5A DNA MER1_type -3 186 73 2492 69 3 0 chrX_random 3816390 3816694 -5482312 + AluY SINE Alu 1 305 -6 782 186 36 78 chrX_random 3816694 3816764 -5482242 - MER5A DNA MER1_type -116 73 2 2316 109 0 0 chrX_random 3816919 3817222 -5481784 - AluSx SINE Alu -9 303 1 2317 70 17 10 chrX_random 3817740 3818039 -5480967 - AluY SINE Alu -10 301 1 5446 152 30 75 chrX_random 3818128 3818185 -5480821 + Tigger3b DNA MER2_type 1 59 -2969 7799 30 2 0 chrX_random 3818185 3819080 -5479926 - MER11D LTR ERVK 0 897 1 5446 152 30 75 chrX_random 3819080 3819214 -5479792 + Tigger3b DNA MER2_type 59 197 -2831 2058 117 4 0 chrX_random 3819214 3819515 -5479491 + AluSx SINE Alu 3 304 0 5446 152 30 75 chrX_random 3819515 3820609 -5478397 + Tigger3b DNA MER2_type 197 1231 0 936 180 0 6 chrX_random 3821776 3821937 -5477069 - AluJb SINE Alu -9 303 144 2354 169 31 79 chrX_random 3822094 3822702 -5476304 - L1MC3 LINE L1 -8 7777 7199 273 262 33 25 chrX_random 3823011 3823133 -5475873 - MLT1J LTR MaLR 0 511 389 239 287 28 49 chrX_random 3823333 3823476 -5475530 - MLT1J LTR MaLR -350 161 22 762 330 18 29 chrX_random 3823506 3823961 -5475045 - ERVL LTR ERVL -3199 2565 2116 1902 189 87 17 chrX_random 3826934 3827393 -5471613 + MLT1D LTR MaLR 1 491 -14 2431 149 115 39 chrX_random 3827395 3828134 -5470872 + pTR5 LTR ERV1 743 2020 -418 367 233 10 0 chrX_random 3828134 3828237 -5470769 + LTR30 LTR ERV1 539 642 -80 2328 76 0 3 chrX_random 3828237 3828565 -5470441 + pTR5 LTR ERV1 66 392 -2046 1362 162 61 171 chrX_random 3829034 3829559 -5469447 + MLT1C LTR MaLR 1 467 0 1307 162 30 34 chrX_random 3829976 3830304 -5468702 - pTR5 LTR ERV1 -1370 1068 742 899 149 12 25 chrX_random 3830871 3831032 -5467974 + AluJb SINE Alu 144 302 -10 486 253 11 39 chrX_random 3831551 3831665 -5467341 + MER96B DNA MER1_type? 5 115 -302 2141 92 21 0 chrX_random 3831665 3831973 -5467033 + AluSq SINE Alu 1 314 0 486 253 11 39 chrX_random 3831973 3832035 -5466971 + MER96B DNA MER1_type? 115 177 -240 488 315 21 31 chrX_random 3832077 3832363 -5466643 + MER69 DNA AcHobo 76 358 -2168 1705 178 166 25 chrX_random 3832366 3832389 -5466617 - MLT1D LTR MaLR 0 505 487 2275 132 91 8 chrX_random 3832389 3832784 -5466222 + MSTA LTR MaLR 1 428 0 1705 178 166 25 chrX_random 3832784 3833199 -5465807 - MLT1D LTR MaLR -18 487 5 563 304 75 15 chrX_random 3833204 3833405 -5465601 + MER69 DNA AcHobo 358 570 -656 * 860 233 96 12 chrX_random 3833403 3833531 -5465475 + MER69 DNA AcHobo 2013 2129 -397 1967 124 0 55 chrX_random 3833531 3833838 -5465168 - AluSx SINE Alu -22 290 1 860 233 96 12 chrX_random 3833838 3834125 -5464881 + MER69 DNA AcHobo 2129 2463 -63 2213 117 0 7 chrX_random 3834127 3834435 -5464571 + AluSx SINE Alu 1 306 -6 1078 97 5 32 chrX_random 3835399 3835585 -5463421 + L1MA5A LINE L1 6114 6294 -3 1593 194 53 0 chrX_random 3835753 3836036 -5462970 + AluJb SINE Alu 1 298 -14 25 0 0 0 chrX_random 3836078 3836103 -5462903 + AT_rich Low_complexity Low_complexity 1 25 0 1565 191 37 7 chrX_random 3838965 3839259 -5459747 + AluJo SINE Alu 1 303 -9 235 260 27 55 chrX_random 3840491 3840564 -5458442 + MIR SINE MIR 23 93 -115 1428 241 34 61 chrX_random 3840753 3841227 -5457779 - MLT2B1 LTR ERVL -59 461 1 235 272 41 71 chrX_random 3842394 3842655 -5456351 - L2 LINE L2 -271 3042 2794 2567 97 8 24 chrX_random 3843181 3843551 -5455455 + THE1B LTR MaLR 1 364 0 1718 147 6 22 chrX_random 3844456 3844769 -5454237 + L1MB3 LINE L1 5869 6176 -7 463 201 29 0 chrX_random 3844850 3845024 -5453982 + (TA)n Simple_repeat Simple_repeat 2 180 0 324 83 117 167 chrX_random 3845410 3845530 -5453476 - MER34C LTR ERV1 -1 584 451 1189 214 61 19 chrX_random 3845542 3845678 -5453328 - MER4D LTR ERV1 -1 902 773 501 150 0 0 chrX_random 3845678 3845758 -5453248 + MADE1 DNA Mariner 1 80 0 1189 214 61 19 chrX_random 3845758 3845981 -5453025 - MER4D LTR ERV1 -130 773 528 1569 170 7 0 chrX_random 3845993 3846276 -5452730 - MER49 LTR ERV1 -638 285 1 1164 189 65 89 chrX_random 3846276 3846507 -5452499 - MER34C LTR ERV1 -122 463 245 2130 118 0 10 chrX_random 3846507 3846804 -5452202 + AluSc SINE Alu 1 294 -15 1164 189 65 89 chrX_random 3846804 3847000 -5452006 - MER34C LTR ERV1 -340 245 46 860 264 18 0 chrX_random 3847789 3848009 -5450997 - MER58A DNA MER1_type 0 224 1 3262 149 98 25 chrX_random 3848256 3848989 -5450017 - LTR48 LTR ERV1 0 787 1 4125 243 71 30 chrX_random 3849031 3850528 -5448478 - L1MCa LINE L1 -1551 4875 3300 2408 104 0 0 chrX_random 3850528 3850835 -5448171 - AluSg SINE Alu -3 307 1 4125 243 71 30 chrX_random 3850835 3851026 -5447980 - L1MCa LINE L1 -3126 3300 3118 1233 243 112 19 chrX_random 3851022 3851539 -5447467 - L1MCa LINE L1 -3639 2787 2319 * 2317 106 3 0 chrX_random 3851539 3851851 -5447155 - AluSp SINE Alu 0 313 1 1233 243 112 19 chrX_random 3851851 3852188 -5446818 - L1MCa LINE L1 -4107 2319 1851 23 33 0 0 chrX_random 3852800 3852830 -5446176 + AT_rich Low_complexity Low_complexity 1 30 0 295 297 68 16 chrX_random 3852948 3853140 -5445866 + Charlie2 DNA MER1_type 2494 2695 -167 356 300 0 0 chrX_random 3853185 3853315 -5445691 + L1MC/D LINE L1 3699 3828 -2318 1092 70 0 0 chrX_random 3853547 3853676 -5445330 + AluSq/x SINE Alu 1 129 -183 336 24 0 0 chrX_random 3853676 3853717 -5445289 + (TAAAA)n Simple_repeat Simple_repeat 2 42 0 438 296 39 30 chrX_random 3853720 3853953 -5445053 + L1MC/D LINE L1 4309 4543 -1603 2162 112 24 7 chrX_random 3853958 3854254 -5444752 - AluSg SINE Alu -9 301 1 346 188 0 0 chrX_random 3854404 3854468 -5444538 + MER77 LTR ERV1 77 140 -465 1136 203 18 0 chrX_random 3854588 3854805 -5444201 + AluJb SINE Alu 71 291 -21 450 0 0 0 chrX_random 3854812 3854862 -5444144 + (CA)n Simple_repeat Simple_repeat 2 51 0 707 292 70 27 chrX_random 3854862 3855169 -5443837 + MER77 LTR ERV1 309 604 -1 287 310 86 5 chrX_random 3855326 3855523 -5443483 + L1MC/D LINE L1 4804 5016 -1130 404 260 161 31 chrX_random 3855879 3856043 -5442963 + L1MC/D LINE L1 5427 5621 -2187 360 0 0 0 chrX_random 3856043 3856083 -5442923 + (CA)n Simple_repeat Simple_repeat 1 40 0 404 260 161 31 chrX_random 3856083 3856110 -5442896 + L1MC/D LINE L1 5621 5643 -2165 1798 148 56 36 chrX_random 3856196 3856554 -5442452 + MER47A DNA MER2_type 2 366 0 24 0 0 0 chrX_random 3856766 3856790 -5442216 + AT_rich Low_complexity Low_complexity 1 24 0 1773 52 5 0 chrX_random 3857141 3857351 -5441655 + AluSp SINE Alu 89 299 -14 318 290 114 50 chrX_random 3858174 3858402 -5440604 + MIR SINE MIR 3 242 -20 213 279 0 0 chrX_random 3858404 3858447 -5440559 + polypyrimidine Low_complexity Low_complexity 2 44 0 180 0 0 0 chrX_random 3859905 3859925 -5439081 + (A)n Simple_repeat Simple_repeat 1 20 0 297 51 0 0 chrX_random 3860433 3860472 -5438534 + (TG)n Simple_repeat Simple_repeat 2 40 0 2703 94 6 0 chrX_random 3860596 3860958 -5438048 - THE1B LTR MaLR 0 364 1 249 159 0 0 chrX_random 3861479 3861523 -5437483 + (TA)n Simple_repeat Simple_repeat 2 45 0 1023 194 32 19 chrX_random 3862225 3862441 -5436565 - MER20 DNA MER1_type 0 219 1 356 321 0 43 chrX_random 3862515 3862655 -5436351 - L2 LINE L2 -1 3271 3138 212 362 46 40 chrX_random 3862732 3862884 -5436122 - L2 LINE L2 -556 2758 2606 408 60 194 0 chrX_random 3863367 3863434 -5435572 - MADE1 DNA Mariner 0 80 1 320 85 0 0 chrX_random 3863458 3863505 -5435501 - MADE1 DNA Mariner -33 47 1 311 49 0 0 chrX_random 3863533 3863574 -5435432 - MADE1 DNA Mariner -39 41 1 374 175 25 8 chrX_random 3864362 3864482 -5434524 + (TAGA)n Simple_repeat Simple_repeat 4 125 0 347 238 212 58 chrX_random 3864610 3864799 -5434207 - L2 LINE L2 -2 3311 3094 2183 121 18 52 chrX_random 3864897 3865285 -5433721 + THE1C LTR MaLR 1 375 0 461 292 50 40 chrX_random 3865706 3865908 -5433098 - MIR SINE MIR -48 214 11 23 33 0 0 chrX_random 3866217 3866247 -5432759 + AT_rich Low_complexity Low_complexity 1 30 0 263 259 30 38 chrX_random 3866536 3866667 -5432339 + MER103 DNA DNA 27 156 -10 305 219 27 17 chrX_random 3866806 3866952 -5432054 + MER53 DNA DNA 1 189 0 216 0 0 0 chrX_random 3867262 3867286 -5431720 + (T)n Simple_repeat Simple_repeat 1 24 0 2349 96 3 0 chrX_random 3869397 3869698 -5429308 - AluSp SINE Alu -11 302 1 212 257 14 14 chrX_random 3869833 3869907 -5429099 + (CATATA)n Simple_repeat Simple_repeat 5 78 0 489 249 17 33 chrX_random 3870636 3870817 -5428189 + LTR41 LTR ERVL 1 178 -595 189 0 0 0 chrX_random 3871300 3871321 -5427685 + (A)n Simple_repeat Simple_repeat 1 21 0 1852 159 50 19 chrX_random 3871517 3871881 -5427125 - THE1C LTR MaLR 0 375 1 560 319 115 65 chrX_random 3872683 3872834 -5426172 - L2 LINE L2 -607 2707 2565 2212 100 0 20 chrX_random 3872834 3873135 -5425871 + AluSg SINE Alu 1 295 -15 560 319 115 65 chrX_random 3873135 3873479 -5425527 - L2 LINE L2 -749 2565 2187 439 200 248 21 chrX_random 3873659 3873804 -5425202 - MER5B DNA MER1_type 0 178 1 242 391 47 19 chrX_random 3874454 3874669 -5424337 - L2 LINE L2 -625 2689 2469 1463 224 72 64 chrX_random 3874788 3875289 -5423717 - MLT1D LTR MaLR 0 505 1 258 203 14 27 chrX_random 3876464 3876528 -5422478 + (TA)n Simple_repeat Simple_repeat 2 66 -8 2317 121 8 85 chrX_random 3876528 3876998 -5422008 - Tigger2a DNA MER2_type 0 434 1 258 203 14 27 chrX_random 3876998 3877007 -5421999 + (TA)n Simple_repeat Simple_repeat 66 74 0 1515 242 118 28 chrX_random 3877064 3877605 -5421401 + MLT1E LTR MaLR 4 593 0 26 30 0 0 chrX_random 3877968 3878001 -5421005 + AT_rich Low_complexity Low_complexity 1 33 0 1470 224 78 21 chrX_random 3878564 3878997 -5420009 - MLT1D LTR MaLR -1 504 47 2313 104 13 3 chrX_random 3879141 3879448 -5419558 + AluSx SINE Alu 1 310 -2 1979 174 21 19 chrX_random 3880139 3880513 -5418493 + THE1C LTR MaLR 1 375 0 27 0 0 0 chrX_random 3880582 3880609 -5418397 + AT_rich Low_complexity Low_complexity 1 27 0 1656 147 35 35 chrX_random 3880609 3880977 -5418029 + L1MA7 LINE L1 5882 6249 -42 251 291 0 47 chrX_random 3881665 3881751 -5417255 - L2 LINE L2 -11 3261 3180 2259 118 0 0 chrX_random 3881852 3882158 -5416848 + AluSx SINE Alu 1 306 -6 2073 190 24 80 chrX_random 3882566 3883141 -5415865 - MLT2B3 LTR ERVL -10 544 2 932 302 143 33 chrX_random 3884652 3885493 -5413513 - L2 LINE L2 -3 3310 2385 507 354 56 24 chrX_random 3885982 3886355 -5412651 + L2 LINE L2 133 517 -2797 23 0 0 0 chrX_random 3886478 3886501 -5412505 + AT_rich Low_complexity Low_complexity 1 23 0 1013 174 138 120 chrX_random 3886581 3886725 -5412281 - MLT1E2 LTR MaLR -116 510 370 1957 132 4 0 chrX_random 3886725 3887005 -5412001 - AluSx SINE Alu -30 282 2 1013 174 138 120 chrX_random 3887005 3887303 -5411703 - MLT1E2 LTR MaLR -256 370 60 1039 103 6 12 chrX_random 3888877 3889042 -5409964 - Charlie3 DNA MER1_type -4 2706 2543 215 143 24 0 chrX_random 3891502 3891544 -5407462 + (CA)n Simple_repeat Simple_repeat 2 44 0 195 129 0 0 chrX_random 3891661 3891692 -5407314 + (TG)n Simple_repeat Simple_repeat 2 32 0 32 0 0 0 chrX_random 3893103 3893135 -5405871 + AT_rich Low_complexity Low_complexity 1 32 0 2113 119 0 23 chrX_random 3893404 3893714 -5405292 + AluSx SINE Alu 1 303 -9 186 43 0 0 chrX_random 3894111 3894134 -5404872 + (TAGA)n Simple_repeat Simple_repeat 4 26 0 419 223 17 29 chrX_random 3894177 3894352 -5404654 + (TA)n Simple_repeat Simple_repeat 1 173 0 239 284 0 29 chrX_random 3894323 3894425 -5404581 + (CATA)n Simple_repeat Simple_repeat 2 100 0 * 813 209 115 30 chrX_random 3894500 3894734 -5404272 - MLT2F LTR ERVL -43 620 367 626 259 113 32 chrX_random 3894816 3895160 -5403846 + MLT1J LTR MaLR 107 478 -33 305 276 29 11 chrX_random 3897651 3897744 -5401262 + (TA)n Simple_repeat Simple_repeat 2 104 -74 1649 181 3 3 chrX_random 3897744 3898056 -5400950 + AluJo SINE Alu 1 312 0 305 276 29 11 chrX_random 3898056 3898133 -5400873 + (TA)n Simple_repeat Simple_repeat 104 178 0 187 225 0 17 chrX_random 3898600 3898720 -5400286 + (TA)n Simple_repeat Simple_repeat 2 119 0 30 45 0 0 chrX_random 3898731 3898775 -5400231 + AT_rich Low_complexity Low_complexity 1 44 0 208 176 20 0 chrX_random 3898807 3898858 -5400148 + (TA)n Simple_repeat Simple_repeat 2 53 0 409 56 0 28 chrX_random 3899443 3899514 -5399492 + (TG)n Simple_repeat Simple_repeat 1 69 0 802 280 31 14 chrX_random 3900011 3900304 -5398702 + LTR16C LTR ERVL 163 460 -31 2135 83 11 7 chrX_random 3900770 3901075 -5397931 - AluSg1 SINE Alu 0 306 1 1656 159 26 29 chrX_random 3901099 3901408 -5397598 - AluJb SINE Alu -4 308 1 651 329 133 23 chrX_random 3901465 3902036 -5396970 + L3 LINE CR1 806 1439 -138 253 286 89 70 chrX_random 3903274 3903533 -5395473 - MARNA DNA Mariner -42 544 281 2360 85 0 22 chrX_random 3903553 3903872 -5395134 - AluSx SINE Alu 0 312 1 3276 120 27 27 chrX_random 3903893 3904096 -5394910 + L1PB4 LINE L1 5593 5795 -361 234 0 0 0 chrX_random 3904096 3904122 -5394884 + (CA)n Simple_repeat Simple_repeat 2 27 0 3276 120 27 27 chrX_random 3904122 3904469 -5394537 + L1PB4 LINE L1 5794 6143 -13 2164 124 20 3 chrX_random 3904824 3905180 -5393826 - MER1A DNA MER1_type -167 362 1 408 55 0 0 chrX_random 3905424 3905479 -5393527 + (TG)n Simple_repeat Simple_repeat 2 56 0 340 258 0 21 chrX_random 3905487 3905580 -5393426 - L1MC4 LINE L1 -1339 6703 6613 219 204 0 0 chrX_random 3905584 3905633 -5393373 + (TATATG)n Simple_repeat Simple_repeat 2 50 0 227 215 31 0 chrX_random 3905637 3905702 -5393304 - L1MC4 LINE L1 -1339 6703 6637 267 216 0 14 chrX_random 3905727 3905801 -5393205 + (TA)n Simple_repeat Simple_repeat 2 74 0 2227 124 0 0 chrX_random 3906003 3906301 -5392705 - AluSx SINE Alu -11 301 4 231 299 0 0 chrX_random 3906577 3906664 -5392342 + L1MC5 LINE L1 7711 7797 -164 1805 183 14 6 chrX_random 3906666 3907022 -5391984 - MLT1A1 LTR MaLR -6 359 1 294 196 78 29 chrX_random 3907029 3907131 -5391875 + L1MC5 LINE L1 7802 7908 -53 261 382 32 8 chrX_random 3907331 3907454 -5391552 - L2 LINE L2 -23 3249 3124 1922 183 0 0 chrX_random 3907892 3908204 -5390802 - AluJb SINE Alu 0 312 1 2520 74 0 0 chrX_random 3908655 3908964 -5390042 + AluY SINE Alu 1 309 -2 650 45 22 0 chrX_random 3908964 3909053 -5389953 + (GGAA)n Simple_repeat Simple_repeat 2 92 0 1787 165 4 4 chrX_random 3909071 3909350 -5389656 + AluJb SINE Alu 1 279 -33 203 0 37 0 chrX_random 3909351 3909378 -5389628 + (GAAAA)n Simple_repeat Simple_repeat 4 31 0 396 161 0 0 chrX_random 3909378 3909459 -5389547 + GA-rich Low_complexity Low_complexity 1 81 0 752 177 0 8 chrX_random 3909559 3909689 -5389317 - FLAM_A SINE Alu -4 129 1 885 182 0 41 chrX_random 3909780 3909950 -5389056 - FRAM SINE Alu -3 163 1 5275 98 5 9 chrX_random 3910394 3911192 -5387814 - L1PA13 LINE L1 -1 6162 5368 213 39 0 0 chrX_random 3911363 3911389 -5387617 + (TG)n Simple_repeat Simple_repeat 1 26 0 227 263 151 36 chrX_random 3912079 3912220 -5386786 - MIR SINE MIR -67 141 18 311 281 80 72 chrX_random 3912426 3913074 -5385932 + L1MEd LINE L1 605 1257 -4862 335 289 52 46 chrX_random 3913210 3913404 -5385602 + L1MEd LINE L1 3104 3298 -2831 617 192 0 8 chrX_random 3913663 3913793 -5385213 - MER3 DNA MER1_type -10 199 71 23 0 0 0 chrX_random 3914098 3914121 -5384885 + AT_rich Low_complexity Low_complexity 1 23 0 1801 113 27 0 chrX_random 3914959 3915251 -5383755 + L1MA2 LINE L1 6005 6304 0 29 0 0 0 chrX_random 3915251 3915280 -5383726 + AT_rich Low_complexity Low_complexity 1 29 0 723 180 0 0 chrX_random 3915344 3915466 -5383540 - Tigger3(Golem) DNA MER2_type -2 3027 2906 2579 160 31 75 chrX_random 3915469 3916055 -5382951 - Tigger3b DNA MER2_type -669 562 3 294 125 0 0 chrX_random 3916059 3916107 -5382899 + (TAGG)n Simple_repeat Simple_repeat 1 48 0 287 232 12 0 chrX_random 3916396 3916478 -5382528 - L1M4 LINE L1 -2187 3959 3877 189 107 0 0 chrX_random 3916511 3916539 -5382467 + (CA)n Simple_repeat Simple_repeat 2 29 0 27 62 0 0 chrX_random 3916717 3916765 -5382241 + AT_rich Low_complexity Low_complexity 1 48 0 336 294 28 73 chrX_random 3919402 3919579 -5379427 - MIR3 SINE MIR -3 205 37 240 35 0 0 chrX_random 3919663 3919692 -5379314 + (TTTG)n Simple_repeat Simple_repeat 3 31 0 381 198 10 20 chrX_random 3919972 3920073 -5378933 + LTR1 LTR ERV1 1 100 -685 263 360 80 8 chrX_random 3920706 3920831 -5378175 + L2 LINE L2 3139 3272 0 1676 141 26 15 chrX_random 3921182 3921478 -5377528 + AluJb SINE Alu 12 310 0 218 325 50 75 chrX_random 3921559 3921719 -5377287 - MIR3 SINE MIR -21 187 32 188 362 0 0 chrX_random 3921811 3921869 -5377137 - L2 LINE L2 0 3313 3256 2198 117 0 13 chrX_random 3922279 3922578 -5376428 + AluSq SINE Alu 5 299 -14 327 169 0 17 chrX_random 3923560 3923619 -5375387 - MER20 DNA MER1_type -160 59 2 540 251 58 29 chrX_random 3923730 3923901 -5375105 - FRAM SINE Alu 0 176 1 705 167 128 28 chrX_random 3924108 3924280 -5374726 + MLT2B2 LTR ERVL 321 481 -34 924 70 14 14 chrX_random 3924280 3924423 -5374583 + (TCTA)n Simple_repeat Simple_repeat 3 145 0 705 167 128 28 chrX_random 3924423 3924462 -5374544 + MLT2B2 LTR ERVL 481 515 0 2380 106 33 22 chrX_random 3925435 3925795 -5373211 - THE1B LTR MaLR 0 364 1 2450 99 0 0 chrX_random 3926776 3927089 -5371917 - AluSq SINE Alu 0 313 1 369 214 0 0 chrX_random 3927214 3927312 -5371694 + (TCCA)n Simple_repeat Simple_repeat 4 101 0 952 221 9 40 chrX_random 3928082 3928304 -5370702 - AluJo SINE Alu -11 301 87 2363 107 30 30 chrX_random 3928844 3929208 -5369798 - THE1B LTR MaLR 0 364 1 1330 172 0 5 chrX_random 3930137 3930341 -5368665 - AluJb SINE Alu -23 289 87 3005 169 29 50 chrX_random 3930377 3931093 -5367913 - LTR1 LTR ERV1 0 785 85 907 217 74 10 chrX_random 3932315 3932518 -5366488 - AluJo SINE Alu -94 218 3 337 262 181 20 chrX_random 3933498 3933647 -5365359 + MER5B DNA MER1_type 6 178 0 2036 214 120 53 chrX_random 3935433 3935635 -5363371 + L1MC4 LINE L1 6991 7178 -864 1630 170 14 17 chrX_random 3935635 3935923 -5363083 + AluJo SINE Alu 26 312 0 2036 214 120 53 chrX_random 3935923 3936523 -5362483 + L1MC4 LINE L1 7178 7846 -196 925 176 39 5 chrX_random 3937260 3937464 -5361542 + MER20B DNA MER1_type 1 211 -8 2009 141 7 0 chrX_random 3938322 3938620 -5360386 + AluSq SINE Alu 1 300 -13 295 309 84 15 chrX_random 3939315 3939470 -5359536 - MIR SINE MIR -68 140 18 24 35 0 53 chrX_random 3940192 3940249 -5358757 + AT_rich Low_complexity Low_complexity 1 54 0 991 176 0 0 chrX_random 3940308 3940484 -5358522 + L1MA8 LINE L1 5623 5798 -493 328 200 87 0 chrX_random 3940508 3940623 -5358383 + (TATATG)n Simple_repeat Simple_repeat 3 127 0 2682 123 31 22 chrX_random 3940640 3941129 -5357877 + L1MA8 LINE L1 5793 6285 -6 24 0 0 0 chrX_random 3941134 3941158 -5357848 + AT_rich Low_complexity Low_complexity 1 24 0 383 273 74 28 chrX_random 3941682 3941898 -5357108 - MER20B DNA MER1_type -44 739 514 1606 199 25 7 chrX_random 3942147 3942429 -5356577 + AluJo SINE Alu 1 287 -25 1451 175 0 45 chrX_random 3942440 3942726 -5356280 + AluJo SINE Alu 1 273 -39 489 267 213 7 chrX_random 3942767 3943044 -5355962 - MER20B DNA MER1_type -449 334 1 225 108 0 0 chrX_random 3945939 3945976 -5353030 + (T)n Simple_repeat Simple_repeat 1 37 0 876 157 13 106 chrX_random 3947076 3947311 -5351695 + MER20 DNA MER1_type 1 213 -6 463 275 0 18 chrX_random 3947953 3948138 -5350868 + L1MC4 LINE L1 7382 7653 -342 4985 88 126 85 chrX_random 3948147 3949617 -5349389 + pTR5 LTR ERV1 743 2438 0 382 239 206 22 chrX_random 3949627 3949903 -5349103 + L1MC4 LINE L1 7574 7900 -142 23 54 0 0 chrX_random 3950133 3950170 -5348836 + AT_rich Low_complexity Low_complexity 1 37 0 1355 230 58 27 chrX_random 3950194 3950564 -5348442 + L1MB7 LINE L1 5713 6101 -83 1935 141 46 32 chrX_random 3950564 3950934 -5348072 + THE1C LTR MaLR 1 375 0 1355 230 58 27 chrX_random 3950934 3951011 -5347995 + L1MB7 LINE L1 6101 6174 -10 1268 119 0 6 chrX_random 3951224 3951401 -5347605 - AluSg/x SINE Alu -12 300 125 621 225 73 17 chrX_random 3951933 3952111 -5346895 + MER5A DNA MER1_type 2 189 0 2153 155 14 3 chrX_random 3952937 3953298 -5345708 - MLT1A1 LTR MaLR 0 365 1 22 35 0 0 chrX_random 3955025 3955054 -5343952 + AT_rich Low_complexity Low_complexity 1 29 0 1021 103 7 0 chrX_random 3955831 3955967 -5343039 + AluY SINE Alu 1 137 -174 873 199 37 19 chrX_random 3955989 3956205 -5342801 - L1MB2 LINE L1 -57 6114 5895 303 233 0 0 chrX_random 3956294 3956367 -5342639 - LTR16A LTR ERVL -79 371 299 2295 91 0 0 chrX_random 3956564 3956851 -5342155 - AluSg SINE Alu -23 287 1 310 281 23 53 chrX_random 3957390 3957561 -5341445 - ERVL LTR ERVL -829 4935 4770 225 240 20 0 chrX_random 3957805 3957855 -5341151 + MER91B DNA MER1_type 1 51 -139 271 278 25 11 chrX_random 3958496 3958583 -5340423 + MIR SINE MIR 19 107 -101 258 32 0 0 chrX_random 3959691 3959722 -5339284 + (CA)n Simple_repeat Simple_repeat 2 32 0 * 279 0 0 0 chrX_random 3959721 3959752 -5339254 + (GA)n Simple_repeat Simple_repeat 2 32 0 870 206 11 11 chrX_random 3961205 3961394 -5337612 - MLT1D LTR MaLR 0 505 317 23 0 0 0 chrX_random 3961550 3961573 -5337433 + AT_rich Low_complexity Low_complexity 1 23 0 942 216 12 48 chrX_random 3962261 3962577 -5336429 - MLT1A1 LTR MaLR 0 365 19 3488 117 4 2 chrX_random 3962915 3963444 -5335562 - LTR26B LTR ERV1 0 531 2 2601 143 18 7 chrX_random 3964379 3964819 -5334187 + MER65A LTR ERV1 1 445 0 2341 36 0 0 chrX_random 3964995 3965273 -5333733 + L1PA3 LINE L1 5875 6152 -3 25 0 0 0 chrX_random 3965292 3965317 -5333689 + AT_rich Low_complexity Low_complexity 1 25 0 1052 146 55 32 chrX_random 3965510 3965730 -5333276 + L1MB7 LINE L1 5944 6168 -16 754 376 51 15 chrX_random 3965792 3966263 -5332743 - L3 LINE CR1 -41 1536 1049 649 215 31 0 chrX_random 3966355 3966518 -5332488 - MER53 DNA DNA 0 189 22 3053 199 44 8 chrX_random 3966524 3967234 -5331772 - L1MC1 LINE L1 -10 6323 5589 193 255 20 0 chrX_random 3967365 3967416 -5331590 - L2 LINE L2 0 3313 3262 188 393 12 0 chrX_random 3968852 3968936 -5330070 - L2 LINE L2 0 3313 3229 1514 168 69 9 chrX_random 3969220 3969554 -5329452 + L1MA4 LINE L1 5941 6294 -6 958 203 19 0 chrX_random 3970547 3970754 -5328252 + L1MC1 LINE L1 6113 6323 -10 337 254 15 0 chrX_random 3970788 3970918 -5328088 + (CATA)n Simple_repeat Simple_repeat 3 134 0 2824 80 21 92 chrX_random 3971947 3972043 -5326963 - MLT2A1 LTR ERVL 0 444 343 297 0 0 0 chrX_random 3972043 3972076 -5326930 + (CA)n Simple_repeat Simple_repeat 2 34 0 2824 80 21 92 chrX_random 3972076 3972457 -5326549 - MLT2A1 LTR ERVL -101 343 1 26292 62 7 1 chrX_random 3972457 3975887 -5323119 - HERVL-A1 LTR ERVL 0 5654 2205 5560 56 8 7 chrX_random 3975883 3976620 -5322386 - HERVL-A1 LTR ERVL -4479 1175 438 * 294 29 0 0 chrX_random 3976650 3976685 -5322321 + (CA)n Simple_repeat Simple_repeat 2 36 0 2697 84 20 5 chrX_random 3976685 3977068 -5321938 - MLT2A1 LTR ERVL -52 392 1 2180 161 28 86 chrX_random 3978277 3978849 -5320157 - LTR9 LTR ERV1 -20 592 54 325 143 0 36 chrX_random 3978853 3978909 -5320097 - HUERS-P1 LTR ERV1 -6209 54 1 4432 115 45 0 chrX_random 3978909 3979570 -5319436 - LTR8 LTR ERV1 0 691 1 189 0 0 0 chrX_random 3979590 3979611 -5319395 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 1659 144 8 102 chrX_random 3980061 3980463 -5318543 + LTR8 LTR ERV1 1 364 -327 581 118 109 25 chrX_random 3980457 3980576 -5318430 - LTR8A LTR ERV1 -598 129 1 * 5323 135 14 19 chrX_random 3981667 3982573 -5316433 - L1PB3 LINE L1 -2 6152 5255 1882 112 179 16 chrX_random 3982573 3982886 -5316120 + THE1B LTR MaLR 1 364 0 5323 135 14 19 chrX_random 3982886 3982961 -5316045 - L1PB3 LINE L1 -899 5255 5181 4750 39 0 0 chrX_random 3983346 3983961 -5315045 - L1P LINE L1 -3044 3102 2488 8926 37 0 3 chrX_random 3983961 3985832 -5313174 + L1PA5 LINE L1 4281 6151 -3 255 204 0 0 chrX_random 3990823 3990877 -5308129 + (TATATG)n Simple_repeat Simple_repeat 6 59 0 215 350 60 0 chrX_random 3992134 3992251 -5306755 + MIR SINE MIR 133 256 -6 485 224 6 24 chrX_random 3992408 3992578 -5306428 + GA-rich Low_complexity Low_complexity 6 172 0 687 98 0 0 chrX_random 3992708 3992800 -5306206 - AluSg/x SINE Alu -13 297 206 22 0 0 0 chrX_random 3993231 3993253 -5305753 + AT_rich Low_complexity Low_complexity 1 22 0 2268 119 44 44 chrX_random 3993692 3994054 -5304952 + THE1B LTR MaLR 1 362 -2 3991 92 8 8 chrX_random 3994194 3994705 -5304301 + MER9 LTR ERVK 1 511 0 328 269 19 0 chrX_random 3994834 3994942 -5304064 + GA-rich Low_complexity Low_complexity 2 111 0 400 320 56 30 chrX_random 3995997 3996231 -5302775 + MIR SINE MIR 10 249 -13 1538 159 19 52 chrX_random 3998585 3998893 -5300113 - AluJb SINE Alu -14 298 1 280 365 152 7 chrX_random 3999383 3999528 -5299478 - L2 LINE L2 0 3272 3107 315 268 36 36 chrX_random 4000873 4000985 -5298021 + MER94 DNA DNA 2 113 -21 181 226 0 0 chrX_random 4001044 4001075 -5297931 + MER5B DNA MER1_type 14 44 -134 * 192 77 0 0 chrX_random 4001078 4001104 -5297902 + (CA)n Simple_repeat Simple_repeat 2 27 0 185 327 0 19 chrX_random 4001104 4001146 -5297860 + MIR3 SINE MIR 150 192 -16 240 350 98 6 chrX_random 4001588 4001771 -5297235 + MIR SINE MIR 44 243 -19 237 283 22 11 chrX_random 4001771 4001863 -5297143 + (CTA)n Simple_repeat Simple_repeat 1 93 0 2079 147 41 49 chrX_random 4001886 4002254 -5296752 + MLT1A1 LTR MaLR 1 365 0 2110 137 34 62 chrX_random 4002273 4002306 -5296700 - THE1C LTR MaLR 0 375 343 2133 129 0 0 chrX_random 4002306 4002601 -5296405 + AluSx SINE Alu 16 310 -2 2110 137 34 62 chrX_random 4002601 4002953 -5296053 - THE1C LTR MaLR -32 343 1 476 357 32 22 chrX_random 4003250 4003561 -5295445 + LTR16B LTR ERVL 37 350 -114 22 0 0 0 chrX_random 4004158 4004180 -5294826 + AT_rich Low_complexity Low_complexity 1 22 0 252 266 43 32 chrX_random 4004194 4004288 -5294718 - MIR SINE MIR -26 236 142 337 327 9 0 chrX_random 4004396 4004506 -5294500 - MIR SINE MIR -34 228 118 2497 133 0 38 chrX_random 4004513 4004905 -5294101 - MER83B LTR ERV1 -1 377 1 1082 204 35 9 chrX_random 4004905 4005131 -5293875 + L1M1 LINE L1 18 249 -7316 7479 128 14 6 chrX_random 4005175 4007367 -5291639 + L1MA1 LINE L1 4093 6302 0 518 200 20 0 chrX_random 4007376 4007476 -5291530 - MIR SINE MIR -121 141 40 265 91 18 0 chrX_random 4007588 4007643 -5291363 - LTR66 LTR ERVL -161 449 394 236 160 0 80 chrX_random 4007650 4007750 -5291256 + (CATA)n Simple_repeat Simple_repeat 3 94 0 260 290 54 11 chrX_random 4008509 4008602 -5290404 + L2 LINE L2 3217 3313 0 249 256 35 12 chrX_random 4008651 4008737 -5290269 - MARNA DNA Mariner -486 100 13 292 203 0 0 chrX_random 4009214 4009273 -5289733 + L1ME4a LINE L1 6063 6121 0 27 0 0 0 chrX_random 4009571 4009598 -5289408 + AT_rich Low_complexity Low_complexity 1 27 0 23 33 0 0 chrX_random 4010659 4010689 -5288317 + AT_rich Low_complexity Low_complexity 1 30 0 818 161 43 0 chrX_random 4011229 4011391 -5287615 - L1MA8 LINE L1 -3 6288 6120 4328 225 41 32 chrX_random 4011649 4012680 -5286326 + MER45B DNA AcHobo 1 1040 0 180 311 27 0 chrX_random 4013072 4013146 -5285860 + MER5B DNA MER1_type 2 77 -101 577 294 39 11 chrX_random 4013825 4014005 -5285001 + MIR SINE MIR 56 240 -22 2122 116 0 7 chrX_random 4014672 4014987 -5284019 - AluSx SINE Alu 0 313 1 2278 123 37 57 chrX_random 4016722 4017105 -5281901 + THE1C LTR MaLR 1 375 0 2188 112 0 0 chrX_random 4017242 4017529 -5281477 - AluSx SINE Alu -8 304 18 2465 85 3 0 chrX_random 4018546 4018852 -5280154 - AluSp SINE Alu -6 307 1 2159 168 11 8 chrX_random 4019760 4020124 -5278882 + MLT1A1 LTR MaLR 1 365 0 233 139 69 14 chrX_random 4020157 4020229 -5278777 + (TA)n Simple_repeat Simple_repeat 1 76 0 245 70 47 0 chrX_random 4020655 4020698 -5278308 + (TCTG)n Simple_repeat Simple_repeat 2 46 0 2524 61 3 0 chrX_random 4021226 4021523 -5277483 + AluSp SINE Alu 2 299 -14 200 321 94 28 chrX_random 4021874 4021980 -5277026 + L2 LINE L2 3139 3251 -21 248 259 0 0 chrX_random 4022143 4022197 -5276809 - L2 LINE L2 -12 3301 3248 813 211 0 0 chrX_random 4022259 4022392 -5276614 - FLAM_A SINE Alu 0 133 1 1926 160 53 28 chrX_random 4022780 4023136 -5275870 - MLT1A1 LTR MaLR 0 365 1 253 289 74 25 chrX_random 4023917 4024038 -5274968 - MIR SINE MIR -63 145 19 2026 210 72 13 chrX_random 4028358 4028816 -5270190 - MLT1D LTR MaLR 0 505 21 220 278 44 22 chrX_random 4029028 4029118 -5269888 + L2 LINE L2 3203 3294 -19 351 350 36 0 chrX_random 4029140 4029280 -5269726 + MIR SINE MIR 47 191 -71 243 358 53 0 chrX_random 4029293 4029388 -5269618 - MER5B DNA MER1_type -2 176 77 2103 152 0 0 chrX_random 4030638 4030940 -5268066 - AluSx SINE Alu -7 305 4 224 307 27 27 chrX_random 4031003 4031078 -5267928 - MIR SINE MIR -110 98 24 488 264 83 54 chrX_random 4031720 4031996 -5267010 + L2 LINE L2 3030 3313 0 1367 249 19 70 chrX_random 4032203 4032730 -5266276 + MLT1D LTR MaLR 1 500 -5 2408 114 5 43 chrX_random 4033379 4033748 -5265258 + THE1A LTR MaLR 1 355 0 218 186 0 0 chrX_random 4034068 4034111 -5264895 + (TG)n Simple_repeat Simple_repeat 2 44 0 304 281 67 43 chrX_random 4034156 4034320 -5264686 + MIR SINE MIR 42 209 -53 214 280 175 21 chrX_random 4034410 4034553 -5264453 - L3b LINE CR1 -291 1292 1128 21 0 0 0 chrX_random 4034653 4034674 -5264332 + AT_rich Low_complexity Low_complexity 1 21 0 251 341 24 0 chrX_random 4035272 4035357 -5263649 + MIR SINE MIR 60 146 -116 566 182 97 91 chrX_random 4036520 4036696 -5262310 - MER20 DNA MER1_type -37 182 6 209 135 27 0 chrX_random 4037814 4037851 -5261155 + (TAAA)n Simple_repeat Simple_repeat 3 40 0 849 244 6 17 chrX_random 4038133 4038313 -5260693 + MER45A DNA AcHobo 1 178 0 22 0 0 0 chrX_random 4041033 4041055 -5257951 + AT_rich Low_complexity Low_complexity 1 22 0 40 37 0 0 chrX_random 4041414 4041468 -5257538 + AT_rich Low_complexity Low_complexity 1 54 0 872 296 79 11 chrX_random 4041949 4042317 -5256689 + MLT1J LTR MaLR 2 394 -117 2451 71 0 0 chrX_random 4042357 4042653 -5256353 - AluY SINE Alu -15 296 1 242 341 22 0 chrX_random 4042701 4042792 -5256214 - MIR SINE MIR -100 162 70 1344 168 0 26 chrX_random 4043990 4044216 -5254790 + AluJb SINE Alu 87 306 -6 25 0 0 0 chrX_random 4044220 4044245 -5254761 + AT_rich Low_complexity Low_complexity 1 25 0 2349 102 0 3 chrX_random 4044612 4044916 -5254090 + AluSq SINE Alu 1 303 -10 246 114 0 0 chrX_random 4044990 4045025 -5253981 + U2 snRNA snRNA 1 35 -153 551 233 80 18 chrX_random 4045978 4046141 -5252865 - MER58A DNA MER1_type -16 208 36 234 162 0 0 chrX_random 4046181 4046218 -5252788 + MIR3 SINE MIR 118 154 -54 240 319 0 0 chrX_random 4046431 4046500 -5252506 + L2 LINE L2 3203 3271 -1 216 257 0 0 chrX_random 4047977 4048047 -5250959 + (CATATA)n Simple_repeat Simple_repeat 3 72 0 2442 46 0 0 chrX_random 4048332 4048656 -5250350 + AluY SINE Alu 1 324 0 914 136 23 0 chrX_random 4050114 4050246 -5248760 - AluJb SINE Alu -173 139 5 1770 166 0 17 chrX_random 4050330 4050631 -5248375 - AluJb SINE Alu -16 296 1 634 204 66 7 chrX_random 4050796 4050948 -5248058 + MER20 DNA MER1_type 58 218 -1 2339 119 33 25 chrX_random 4051736 4052097 -5246909 - THE1B LTR MaLR 0 364 1 486 0 0 0 chrX_random 4052250 4052304 -5246702 + (TC)n Simple_repeat Simple_repeat 1 54 0 739 73 18 0 chrX_random 4053143 4053252 -5245754 - L1PA13 LINE L1 -1 6162 6052 206 305 0 0 chrX_random 4054554 4054613 -5244393 + (CATATA)n Simple_repeat Simple_repeat 6 64 0 265 177 113 0 chrX_random 4055989 4056051 -5242955 + Tigger2 DNA MER2_type 1 69 -2649 * 2315 140 54 30 chrX_random 4056049 4056478 -5242528 + Tigger2 DNA MER2_type 2280 2718 0 252 261 14 0 chrX_random 4057056 4057125 -5241881 + (CATATA)n Simple_repeat Simple_repeat 2 71 0 304 240 158 7 chrX_random 4057145 4057291 -5241715 + MER112 DNA MER1_type 81 248 -12 274 321 34 59 chrX_random 4058215 4058452 -5240554 - L2 LINE L2 -8 3305 3075 319 349 7 59 chrX_random 4058476 4058628 -5240378 - MER91B DNA MER1_type 0 190 47 1457 173 37 57 chrX_random 4058646 4058946 -5240060 - AluJo SINE Alu -6 306 13 31 0 0 0 chrX_random 4059102 4059133 -5239873 + AT_rich Low_complexity Low_complexity 1 31 0 415 57 0 0 chrX_random 4059555 4059608 -5239398 + LTR46 LTR ERV1 1 53 -407 3367 70 38 5 chrX_random 4059614 4060059 -5238947 + LTR46 LTR ERV1 1 460 0 2015 145 6 3 chrX_random 4060497 4060808 -5238198 + AluJb SINE Alu 1 312 0 2495 112 16 0 chrX_random 4060892 4061267 -5237739 - L1PA16 LINE L1 -4 6162 5782 1189 147 11 0 chrX_random 4061353 4061543 -5237463 - AluJb SINE Alu 0 312 121 198 0 0 0 chrX_random 4061543 4061565 -5237441 + (TTTA)n Simple_repeat Simple_repeat 4 25 0 989 0 0 0 chrX_random 4061565 4061674 -5237332 - AluYb8 SINE Alu 0 318 210 937 130 0 0 chrX_random 4061675 4061806 -5237200 - AluJb SINE Alu -181 131 1 180 152 0 0 chrX_random 4061849 4061882 -5237124 + T-rich Low_complexity Low_complexity 4 36 0 1563 205 16 30 chrX_random 4062001 4062304 -5236702 + AluJo SINE Alu 1 299 -13 341 284 181 26 chrX_random 4063309 4063464 -5235542 + MER5A DNA MER1_type 8 186 -3 23 54 0 0 chrX_random 4064571 4064608 -5234398 + AT_rich Low_complexity Low_complexity 1 37 0 1143 326 118 32 chrX_random 4064685 4065697 -5233309 + L2 LINE L2 1278 2376 -938 317 309 59 32 chrX_random 4068569 4068789 -5230217 - L1MC/D LINE L1 -2116 5692 5467 186 43 0 0 chrX_random 4070277 4070300 -5228706 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 2561 115 3 3 chrX_random 4070639 4071003 -5228003 - THE1B LTR MaLR 0 364 1 2560 106 17 3 chrX_random 4073591 4073950 -5225056 - THE1B LTR MaLR 0 364 1 189 224 0 0 chrX_random 4074317 4074375 -5224631 + CT-rich Low_complexity Low_complexity 4 61 0 183 260 120 0 chrX_random 4075549 4075599 -5223407 - L2 LINE L2 -76 3237 3182 978 207 18 14 chrX_random 4075687 4075904 -5223102 + MER20 DNA MER1_type 2 219 0 871 92 0 0 chrX_random 4075949 4076069 -5222937 - L1PA10 LINE L1 -4 6164 6045 25 51 0 0 chrX_random 4076192 4076231 -5222775 + AT_rich Low_complexity Low_complexity 1 39 0 2046 107 3 3 chrX_random 4076254 4076544 -5222462 + AluSx SINE Alu 1 290 -22 26 0 0 0 chrX_random 4076548 4076574 -5222432 + AT_rich Low_complexity Low_complexity 1 26 0 2121 79 50 0 chrX_random 4078190 4078467 -5220539 + AluY SINE Alu 1 291 -20 192 77 0 0 chrX_random 4078467 4078493 -5220513 + (TA)n Simple_repeat Simple_repeat 2 27 0 21 0 0 0 chrX_random 4078752 4078773 -5220233 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chrX_random 4079144 4079173 -5219833 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chrX_random 4080635 4080667 -5218339 + AT_rich Low_complexity Low_complexity 1 32 0 481 161 61 0 chrX_random 4080929 4081109 -5217897 - L1MC1 LINE L1 -16 6317 6077 * 534 237 6 6 chrX_random 4081102 4081258 -5217748 - L1M4 LINE L1 -1233 4913 4758 27 0 0 0 chrX_random 4081343 4081370 -5217636 + AT_rich Low_complexity Low_complexity 1 27 0 24 32 0 0 chrX_random 4082062 4082093 -5216913 + AT_rich Low_complexity Low_complexity 1 31 0 295 251 75 86 chrX_random 4082543 4082730 -5216276 - MIR SINE MIR -77 185 1 3465 108 23 12 chrX_random 4082860 4083187 -5215819 + L1MA2 LINE L1 5741 6078 -226 2260 70 3 0 chrX_random 4083187 4083472 -5215534 + AluY SINE Alu 26 311 0 3465 108 23 12 chrX_random 4083472 4083702 -5215304 + L1MA2 LINE L1 6078 6304 0 26 30 0 0 chrX_random 4083717 4083750 -5215256 + AT_rich Low_complexity Low_complexity 1 33 0 354 291 124 34 chrX_random 4083844 4084109 -5214897 + L1 LINE L1 3163 3451 -2695 522 307 20 0 chrX_random 4084492 4084642 -5214364 + L2 LINE L2 1094 1246 -2068 598 277 24 12 chrX_random 4084683 4084849 -5214157 - MER5B DNA MER1_type -4 174 7 402 241 234 0 chrX_random 4084850 4084987 -5214019 - MER5A DNA MER1_type -18 171 3 737 267 76 41 chrX_random 4084990 4085331 -5213675 + L2 LINE L2 1305 1657 -1657 203 147 0 0 chrX_random 4085366 4085400 -5213606 + (CAGG)n Simple_repeat Simple_repeat 1 34 0 594 179 0 53 chrX_random 4085400 4085590 -5213416 + GA-rich Low_complexity Low_complexity 1 180 0 2196 302 65 45 chrX_random 4085601 4086154 -5212852 + L2 LINE L2 1810 2351 -962 216 0 0 0 chrX_random 4086154 4086178 -5212828 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2196 302 65 45 chrX_random 4086178 4086807 -5212199 + L2 LINE L2 2351 3014 -299 501 263 144 19 chrX_random 4086986 4087146 -5211860 - MER5A DNA MER1_type -1 188 9 1519 180 51 46 chrX_random 4087257 4087629 -5211377 - MLT1A2 LTR MaLR 0 374 1 1742 191 0 7 chrX_random 4087784 4088083 -5210923 + AluJo SINE Alu 6 302 -10 209 382 76 30 chrX_random 4088820 4088951 -5210055 - L2 LINE L2 -18 3254 3118 403 315 54 22 chrX_random 4089491 4089675 -5209331 - HAL1 LINE L1 -17 2490 2301 871 311 136 13 chrX_random 4089774 4090394 -5208612 - HAL1 LINE L1 -337 2170 1475 421 337 101 35 chrX_random 4090503 4090791 -5208215 + HAL1 LINE L1 657 963 -1544 27 0 0 0 chrX_random 4090907 4090934 -5208072 + AT_rich Low_complexity Low_complexity 1 27 0 27 62 0 0 chrX_random 4091545 4091593 -5207413 + AT_rich Low_complexity Low_complexity 1 48 0 1990 139 126 23 chrX_random 4092877 4093265 -5205741 + MSTA LTR MaLR 1 428 0 1720 151 19 68 chrX_random 4093634 4093681 -5205325 + MLT1A1 LTR MaLR 10 58 -307 1875 154 6 25 chrX_random 4093681 4093999 -5205007 + AluJb SINE Alu 1 312 0 1720 151 19 68 chrX_random 4093999 4094321 -5204685 + MLT1A1 LTR MaLR 58 361 -4 199 390 93 17 chrX_random 4094550 4094668 -5204338 - MIR SINE MIR -62 146 20 633 244 17 6 chrX_random 4096318 4096490 -5202516 + L1ME LINE L1 5547 5720 -450 286 346 138 0 chrX_random 4096720 4096850 -5202156 - MIR SINE MIR -47 215 68 * 1344 287 73 90 chrX_random 4096844 4097875 -5201131 - L2 LINE L2 -174 3139 2090 210 37 0 0 chrX_random 4098074 4098101 -5200905 + (TG)n Simple_repeat Simple_repeat 2 28 0 367 191 15 29 chrX_random 4099336 4099472 -5199534 + CT-rich Low_complexity Low_complexity 1 134 0 226 139 0 0 chrX_random 4099478 4099514 -5199492 + MLT1A2 LTR MaLR 339 374 0 615 239 166 15 chrX_random 4099515 4099720 -5199286 - MER21B LTR ERV1 -609 254 19 2834 65 3 0 chrX_random 4099843 4100195 -5198811 + THE1A LTR MaLR 1 353 -2 630 73 0 10 chrX_random 4100197 4100293 -5198713 + THE1A-int LTR MaLR 1 95 -1485 1071 141 40 5 chrX_random 4100858 4101057 -5197949 + L1MB1 LINE L1 5850 6055 -134 1651 166 69 31 chrX_random 4101057 4101593 -5197413 - MLT2A2 LTR ERVL 0 554 1 432 217 0 33 chrX_random 4101595 4101715 -5197291 + L1MB1 LINE L1 6053 6168 0 228 279 153 47 chrX_random 4101781 4101941 -5197065 + MIR SINE MIR 1 182 -26 292 246 0 0 chrX_random 4102003 4102064 -5196942 + L2 LINE L2 3210 3270 -2 22 56 0 0 chrX_random 4102064 4102100 -5196906 + AT_rich Low_complexity Low_complexity 1 36 0 313 308 103 71 chrX_random 4102638 4102796 -5196210 + MIR SINE MIR 1 170 -92 1446 271 72 14 chrX_random 4102796 4103283 -5195723 + MLT2B2 LTR ERVL 1 515 0 313 308 103 71 chrX_random 4103283 4103348 -5195658 + MIR SINE MIR 170 231 -31 2174 118 0 29 chrX_random 4104100 4104413 -5194593 - AluSx SINE Alu -8 304 1 23 86 0 0 chrX_random 4105665 4105723 -5193283 + AT_rich Low_complexity Low_complexity 1 58 0 373 189 23 6 chrX_random 4105723 4105898 -5193108 + (TA)n Simple_repeat Simple_repeat 1 178 0 181 223 21 0 chrX_random 4106037 4106131 -5192875 + (TA)n Simple_repeat Simple_repeat 1 96 0 199 153 47 12 chrX_random 4106186 4106271 -5192735 + (TA)n Simple_repeat Simple_repeat 1 88 0 33 43 0 0 chrX_random 4106344 4106391 -5192615 + AT_rich Low_complexity Low_complexity 1 47 0 241 182 36 12 chrX_random 4106469 4106634 -5192372 + (TA)n Simple_repeat Simple_repeat 1 169 0 25 51 0 0 chrX_random 4106637 4106676 -5192330 + AT_rich Low_complexity Low_complexity 1 39 0 444 220 40 6 chrX_random 4106720 4106893 -5192113 + (TA)n Simple_repeat Simple_repeat 1 179 0 396 200 5 35 chrX_random 4107324 4107560 -5191446 + CT-rich Low_complexity Low_complexity 1 228 0 300 148 0 34 chrX_random 4108565 4108653 -5190353 + (TCCC)n Simple_repeat Simple_repeat 1 85 0 478 192 0 28 chrX_random 4108665 4108847 -5190159 + CT-rich Low_complexity Low_complexity 1 177 0 2238 112 3 0 chrX_random 4110334 4110639 -5188367 + AluSp SINE Alu 1 306 -7 336 24 0 0 chrX_random 4110896 4110937 -5188069 + (TG)n Simple_repeat Simple_repeat 2 42 0 327 159 11 91 chrX_random 4111007 4111095 -5187911 - MLT2C1 LTR ERVL -57 340 260 1559 181 29 71 chrX_random 4111095 4111645 -5187361 + L1M2 LINE L1 5158 5689 -623 6661 87 13 1 chrX_random 4112165 4113093 -5185913 + THE1A-int LTR MaLR 642 1580 0 2565 102 11 6 chrX_random 4113093 4113446 -5185560 + THE1A LTR MaLR 1 355 0 290 233 23 23 chrX_random 4113747 4113833 -5185173 + CT-rich Low_complexity Low_complexity 3 88 0 312 70 0 0 chrX_random 4113883 4113926 -5185080 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 2470 101 8 8 chrX_random 4114104 4114459 -5184547 + THE1A LTR MaLR 1 355 0 222 37 0 0 chrX_random 4115662 4115689 -5183317 + (TA)n Simple_repeat Simple_repeat 1 27 0 1931 124 11 3 chrX_random 4115728 4116042 -5182964 + AluSx SINE Alu 1 316 0 348 64 0 0 chrX_random 4116832 4116879 -5182127 + (CAT)n Simple_repeat Simple_repeat 1 47 0 219 336 199 18 chrX_random 4117833 4118175 -5180831 + L2 LINE L2 2481 2884 -430 268 348 44 37 chrX_random 4118483 4118618 -5180388 + L2 LINE L2 3137 3272 0 351 272 0 0 chrX_random 4119132 4119235 -5179771 + (TG)n Simple_repeat Simple_repeat 1 103 0 1600 159 39 88 chrX_random 4119422 4119786 -5179220 - MER7A DNA MER2_type -1 345 2 365 340 20 20 chrX_random 4119833 4119983 -5179023 - MIR SINE MIR -1 261 112 267 258 192 33 chrX_random 4120166 4120317 -5178689 + MIR SINE MIR 62 236 -26 242 167 0 45 chrX_random 4121297 4121363 -5177643 + GA-rich Low_complexity Low_complexity 6 68 0 1960 160 3 10 chrX_random 4121658 4121971 -5177035 - AluJo SINE Alu -1 311 1 366 23 0 0 chrX_random 4122007 4122050 -5176956 + (TCCA)n Simple_repeat Simple_repeat 3 45 0 264 295 209 29 chrX_random 4122073 4122212 -5176794 - L2 LINE L2 0 3272 3109 333 296 0 38 chrX_random 4123481 4123667 -5175339 + (TA)n Simple_repeat Simple_repeat 2 180 0 1854 159 0 3 chrX_random 4123739 4124035 -5174971 - AluSx SINE Alu -17 295 1 23 0 0 0 chrX_random 4124044 4124067 -5174939 + AT_rich Low_complexity Low_complexity 1 23 0 246 283 243 13 chrX_random 4125405 4125557 -5173449 - MER5A DNA MER1_type 0 189 3 186 249 58 116 chrX_random 4125824 4125997 -5173009 + L2 LINE L2 3046 3208 -105 741 89 32 0 chrX_random 4126066 4126189 -5172817 + GA-rich Low_complexity Low_complexity 1 127 0 811 244 106 9 chrX_random 4126189 4126683 -5172323 - L1ME LINE L1 -525 5639 5095 409 303 181 36 chrX_random 4127075 4127191 -5171815 + L2 LINE L2 2470 2568 -746 2552 225 61 11 chrX_random 4127191 4127813 -5171193 + MER82 DNA MER2_type 1 653 0 409 303 181 36 chrX_random 4127813 4127973 -5171033 + L2 LINE L2 2568 2786 -528 185 331 181 30 chrX_random 4128055 4128221 -5170785 + L2 LINE L2 2852 3042 -271 966 266 33 27 chrX_random 4128246 4128755 -5170251 - MER34B LTR ERV1 -5 560 11 300 348 13 51 chrX_random 4128832 4128990 -5170016 + L2 LINE L2 3160 3311 -2 193 227 61 45 chrX_random 4129026 4129092 -5169914 + L2 LINE L2 3156 3222 -91 1000 245 130 17 chrX_random 4129263 4129724 -5169282 - MLT1G1 LTR MaLR 0 595 83 235 289 0 0 chrX_random 4129853 4129905 -5169101 + (TG)n Simple_repeat Simple_repeat 2 53 0 23 0 0 0 chrX_random 4129934 4129957 -5169049 + AT_rich Low_complexity Low_complexity 1 23 0 279 0 0 0 chrX_random 4130294 4130325 -5168681 + (TG)n Simple_repeat Simple_repeat 2 32 0 312 274 116 14 chrX_random 4130388 4130534 -5168472 - L2 LINE L2 -3 3310 3150 2040 147 0 0 chrX_random 4131536 4131835 -5167171 - AluSx SINE Alu -12 300 2 1943 153 53 35 chrX_random 4131910 4132037 -5166969 - L1MA10 LINE L1 -2 6332 6209 2357 98 42 25 chrX_random 4132037 4132395 -5166611 + THE1B LTR MaLR 1 364 0 1943 153 53 35 chrX_random 4132395 4132718 -5166288 - L1MA10 LINE L1 -125 6209 5874 2841 159 27 0 chrX_random 4132718 4133234 -5165772 + L1MA10 LINE L1 5351 5880 -309 678 180 17 17 chrX_random 4134115 4134293 -5164713 + CT-rich Low_complexity Low_complexity 2 179 0 603 224 17 0 chrX_random 4134310 4134484 -5164522 + CT-rich Low_complexity Low_complexity 3 179 0 198 209 0 0 chrX_random 4135253 4135296 -5163710 + (CATG)n Simple_repeat Simple_repeat 1 43 0 439 194 19 37 chrX_random 4135419 4135527 -5163479 - MER20 DNA MER1_type -113 106 1 538 277 23 34 chrX_random 4135755 4135932 -5163074 + MER5B DNA MER1_type 4 178 0 253 358 32 8 chrX_random 4136289 4136535 -5162471 - HAL1b LINE L1 -690 658 407 350 336 57 39 chrX_random 4136643 4136872 -5162134 - HAL1b LINE L1 -1051 297 65 183 260 120 0 chrX_random 4188517 4188567 -5110439 - L2 LINE L2 -76 3237 3182 990 203 18 14 chrX_random 4188655 4188872 -5110134 + MER20 DNA MER1_type 2 219 0 864 100 0 0 chrX_random 4188917 4189037 -5109969 - L1PA10 LINE L1 -4 6164 6045 25 51 0 0 chrX_random 4189160 4189199 -5109807 + AT_rich Low_complexity Low_complexity 1 39 0 2046 107 3 3 chrX_random 4189222 4189512 -5109494 + AluSx SINE Alu 1 290 -22 22 0 0 0 chrX_random 4189516 4189538 -5109468 + AT_rich Low_complexity Low_complexity 1 22 0 2151 79 50 0 chrX_random 4191154 4191434 -5107572 + AluY SINE Alu 1 294 -17 22 35 0 0 chrX_random 4192107 4192136 -5106870 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chrX_random 4193596 4193628 -5105378 + AT_rich Low_complexity Low_complexity 1 32 0 481 161 61 0 chrX_random 4193890 4194070 -5104936 - L1MC1 LINE L1 -16 6317 6077 * 534 237 6 6 chrX_random 4194063 4194219 -5104787 - L1M4 LINE L1 -1233 4913 4758 27 0 0 0 chrX_random 4194304 4194331 -5104675 + AT_rich Low_complexity Low_complexity 1 27 0 24 32 0 0 chrX_random 4195026 4195057 -5103949 + AT_rich Low_complexity Low_complexity 1 31 0 295 251 75 86 chrX_random 4195507 4195694 -5103312 - MIR SINE MIR -77 185 1 3447 109 23 12 chrX_random 4195824 4196151 -5102855 + L1MA2 LINE L1 5741 6078 -226 2247 74 3 0 chrX_random 4196151 4196436 -5102570 + AluY SINE Alu 26 311 0 3447 109 23 12 chrX_random 4196436 4196666 -5102340 + L1MA2 LINE L1 6078 6304 0 26 30 0 0 chrX_random 4196681 4196714 -5102292 + AT_rich Low_complexity Low_complexity 1 33 0 349 283 128 38 chrX_random 4196808 4197073 -5101933 + L1 LINE L1 3163 3451 -2695 522 307 20 0 chrX_random 4197456 4197606 -5101400 + L2 LINE L2 1094 1246 -2068 590 283 24 12 chrX_random 4197647 4197813 -5101193 - MER5B DNA MER1_type -4 174 7 402 241 234 0 chrX_random 4197814 4197951 -5101055 - MER5A DNA MER1_type -18 171 3 708 273 76 41 chrX_random 4197954 4198295 -5100711 + L2 LINE L2 1305 1657 -1657 203 147 0 0 chrX_random 4198330 4198364 -5100642 + (CAGG)n Simple_repeat Simple_repeat 1 34 0 594 179 0 53 chrX_random 4198364 4198554 -5100452 + GA-rich Low_complexity Low_complexity 1 180 0 2196 302 65 45 chrX_random 4198565 4199118 -5099888 + L2 LINE L2 1810 2351 -962 216 0 0 0 chrX_random 4199118 4199142 -5099864 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2196 302 65 45 chrX_random 4199142 4199771 -5099235 + L2 LINE L2 2351 3014 -299 501 263 144 19 chrX_random 4199950 4200110 -5098896 - MER5A DNA MER1_type -1 188 9 1500 183 51 46 chrX_random 4200221 4200593 -5098413 - MLT1A2 LTR MaLR 0 374 1 1742 191 0 7 chrX_random 4200748 4201047 -5097959 + AluJo SINE Alu 6 302 -10 209 382 76 30 chrX_random 4201784 4201915 -5097091 - L2 LINE L2 -18 3254 3118 401 315 54 22 chrX_random 4202455 4202639 -5096367 - HAL1 LINE L1 -17 2490 2301 871 311 136 13 chrX_random 4202738 4203358 -5095648 - HAL1 LINE L1 -337 2170 1475 421 337 101 35 chrX_random 4203467 4203755 -5095251 + HAL1 LINE L1 657 963 -1544 27 0 0 0 chrX_random 4203871 4203898 -5095108 + AT_rich Low_complexity Low_complexity 1 27 0 27 62 0 0 chrX_random 4204509 4204557 -5094449 + AT_rich Low_complexity Low_complexity 1 48 0 1990 139 126 23 chrX_random 4205841 4206229 -5092777 + MSTA LTR MaLR 1 428 0 1726 151 19 68 chrX_random 4206598 4206645 -5092361 + MLT1A1 LTR MaLR 10 58 -307 1875 154 6 25 chrX_random 4206645 4206963 -5092043 + AluJb SINE Alu 1 312 0 1726 151 19 68 chrX_random 4206963 4207285 -5091721 + MLT1A1 LTR MaLR 58 361 -4 215 381 93 17 chrX_random 4207514 4207632 -5091374 - MIR SINE MIR -62 146 20 633 244 17 6 chrX_random 4209282 4209454 -5089552 + L1ME LINE L1 5547 5720 -450 286 346 138 0 chrX_random 4209684 4209814 -5089192 - MIR SINE MIR -47 215 68 * 1337 287 73 90 chrX_random 4209808 4210839 -5088167 - L2 LINE L2 -174 3139 2090 192 40 0 0 chrX_random 4211038 4211063 -5087943 + (TG)n Simple_repeat Simple_repeat 2 26 0 403 197 13 26 chrX_random 4212279 4212431 -5086575 + CT-rich Low_complexity Low_complexity 1 150 0 226 139 0 0 chrX_random 4212437 4212473 -5086533 + MLT1A2 LTR MaLR 339 374 0 615 239 166 15 chrX_random 4212474 4212679 -5086327 - MER21B LTR ERV1 -609 254 19 681 65 0 11 chrX_random 4212802 4212894 -5086112 + THE1A LTR MaLR 1 91 -264 632 363 16 12 chrX_random 4213058 4213306 -5085700 + MIR SINE MIR 14 262 0 180 244 0 22 chrX_random 4213512 4213557 -5085449 + L2 LINE L2 1758 1801 -1513 383 296 43 57 chrX_random 4214618 4214898 -5084108 + MLT1H LTR MaLR 7 320 -228 353 253 23 0 chrX_random 4215927 4216014 -5082992 + MARNA DNA Mariner 427 515 -71 204 283 30 81 chrX_random 4216530 4216629 -5082377 + MIR3 SINE MIR 108 201 -7 1579 191 0 55 chrX_random 4216998 4217323 -5081683 + AluJo SINE Alu 2 308 -4 191 267 93 53 chrX_random 4217342 4217417 -5081589 - MIR SINE MIR -98 164 87 2315 121 25 3 chrX_random 4217574 4217930 -5081076 + THE1B LTR MaLR 1 364 0 217 310 62 62 chrX_random 4218095 4218224 -5080782 + MER5A DNA MER1_type 61 189 0 480 308 158 0 chrX_random 4218367 4218513 -5080493 + MER5A DNA MER1_type 16 184 -5 1256 134 8 71 chrX_random 4218656 4218910 -5080096 + MER50 LTR ERV1 497 734 0 596 191 9 0 chrX_random 4218912 4219027 -5079979 + MER50-int LTR ERV1 4 119 -7086 2145 126 3 0 chrX_random 4219177 4219486 -5079520 + AluSx SINE Alu 3 312 0 1109 237 86 124 chrX_random 4219556 4220185 -5078821 + MER77 LTR ERV1 1 605 0 2354 161 30 23 chrX_random 4220262 4220691 -5078315 - MSTB1 LTR MaLR 0 432 1 320 308 147 57 chrX_random 4220694 4220993 -5078013 - L3 LINE CR1 -286 1291 966 190 324 76 0 chrX_random 4222495 4222600 -5076406 + MIR3 SINE MIR 91 203 -5 411 171 88 3 chrX_random 4222744 4222833 -5076173 + LTR28 LTR ERV1 1 87 -933 319 267 15 18 chrX_random 4223629 4223902 -5075104 + C-rich Low_complexity Low_complexity 1 271 0 474 217 0 48 chrX_random 4223916 4224105 -5074901 + C-rich Low_complexity Low_complexity 1 180 0 242 167 0 45 chrX_random 4225025 4225091 -5073915 + GA-rich Low_complexity Low_complexity 6 68 0 1960 160 3 10 chrX_random 4225386 4225699 -5073307 - AluJo SINE Alu -1 311 1 366 23 0 0 chrX_random 4225735 4225778 -5073228 + (TCCA)n Simple_repeat Simple_repeat 3 45 0 203 292 226 29 chrX_random 4225801 4225938 -5073068 - L2 LINE L2 0 3272 3109 333 296 0 38 chrX_random 4227208 4227394 -5071612 + (TA)n Simple_repeat Simple_repeat 2 180 0 1854 159 0 3 chrX_random 4227466 4227762 -5071244 - AluSx SINE Alu -17 295 1 23 0 0 0 chrX_random 4227771 4227794 -5071212 + AT_rich Low_complexity Low_complexity 1 23 0 348 64 0 0 chrX_random 4228877 4228924 -5070082 + (ATG)n Simple_repeat Simple_repeat 1 47 0 228 35 0 0 chrX_random 4229714 4229743 -5069263 + (TTG)n Simple_repeat Simple_repeat 1 29 0 1930 124 11 3 chrX_random 4229745 4230028 -5068978 - AluSx SINE Alu -27 285 1 222 37 0 0 chrX_random 4230067 4230094 -5068912 + (TA)n Simple_repeat Simple_repeat 1 27 0 2470 101 8 8 chrX_random 4231297 4231652 -5067354 - THE1A LTR MaLR 0 355 1 246 116 0 0 chrX_random 4231831 4231874 -5067132 + (TAGA)n Simple_repeat Simple_repeat 3 45 0 290 233 23 23 chrX_random 4231924 4232010 -5066996 + GA-rich Low_complexity Low_complexity 3 88 0 2565 102 11 6 chrX_random 4232311 4232664 -5066342 - THE1A LTR MaLR 0 355 1 6661 87 13 1 chrX_random 4232664 4233592 -5065414 - THE1A-int LTR MaLR 0 1580 642 1466 190 29 69 chrX_random 4234114 4234660 -5064346 - L1M2 LINE L1 -626 5686 5158 316 171 11 91 chrX_random 4234660 4234748 -5064258 + MLT2C1 LTR ERVL 260 340 -57 318 26 0 0 chrX_random 4234818 4234857 -5064149 + (CA)n Simple_repeat Simple_repeat 2 40 0 438 196 0 33 chrX_random 4235691 4235875 -5063131 + GA-rich Low_complexity Low_complexity 1 178 0 444 220 40 6 chrX_random 4236340 4236513 -5062493 + (TA)n Simple_repeat Simple_repeat 1 179 0 21 0 0 0 chrX_random 4236557 4236578 -5062428 + AT_rich Low_complexity Low_complexity 1 21 0 289 187 36 8 chrX_random 4236578 4236767 -5062239 + (TA)n Simple_repeat Simple_repeat 5 219 0 314 201 37 22 chrX_random 4236946 4237080 -5061926 + (TA)n Simple_repeat Simple_repeat 1 136 0 181 223 21 0 chrX_random 4237105 4237199 -5061807 + (TA)n Simple_repeat Simple_repeat 1 96 0 373 189 23 6 chrX_random 4237338 4237513 -5061493 + (TA)n Simple_repeat Simple_repeat 1 178 0 23 86 0 0 chrX_random 4237513 4237571 -5061435 + AT_rich Low_complexity Low_complexity 1 58 0 1812 126 7 38 chrX_random 4238824 4239139 -5059867 + AluSx SINE Alu 1 306 0 313 308 103 71 chrX_random 4239888 4239953 -5059053 - MIR SINE MIR -31 231 170 1446 271 72 14 chrX_random 4239953 4240440 -5058566 - MLT2B2 LTR ERVL 0 515 1 313 308 103 71 chrX_random 4240440 4240598 -5058408 - MIR SINE MIR -92 170 1 22 56 0 0 chrX_random 4241136 4241172 -5057834 + AT_rich Low_complexity Low_complexity 1 36 0 292 246 0 0 chrX_random 4241172 4241233 -5057773 - L2 LINE L2 -2 3270 3210 228 279 153 47 chrX_random 4241295 4241455 -5057551 - MIR SINE MIR -26 182 1 402 215 0 41 chrX_random 4241521 4241642 -5057364 - L1MB1 LINE L1 0 6168 6053 955 144 50 0 chrX_random 4241648 4241828 -5057178 + MLT2A2 LTR ERVL 4 192 -261 5026 21 0 0 chrX_random 4241929 4242536 -5056470 - L1PA4 LINE L1 -146 6009 5403 232 220 17 17 chrX_random 4244495 4244554 -5054452 + (CA)n Simple_repeat Simple_repeat 2 60 0 2400 101 16 42 chrX_random 4245456 4245841 -5053165 + THE1C LTR MaLR 1 375 0 569 306 40 0 chrX_random 4246947 4247120 -5051886 + L3b LINE CR1 1228 1407 -176 1098 117 0 42 chrX_random 4248366 4248579 -5050427 + L1MA8 LINE L1 5468 5670 -504 3061 154 26 17 chrX_random 4248705 4249309 -5049697 + L1MA8 LINE L1 5676 6285 -6 448 266 119 48 chrX_random 4249795 4250047 -5048959 - LTR16C LTR ERVL -28 463 194 3483 37 0 2 chrX_random 4250114 4250559 -5048447 - L1PA3 LINE L1 -795 5351 4906 6974 25 0 2 chrX_random 4250559 4251375 -5047631 + L1PA3 LINE L1 5338 6152 -3 3483 37 0 2 chrX_random 4251375 4251386 -5047620 - L1P LINE L1 -1240 4906 4896 756 126 0 0 chrX_random 4251443 4251554 -5047452 - FRAM SINE Alu -18 158 48 797 219 10 21 chrX_random 4254320 4254512 -5044494 + MER58B DNA MER1_type 146 335 -6 24 0 0 0 chrX_random 4254719 4254743 -5044263 + AT_rich Low_complexity Low_complexity 1 24 0 213 154 0 0 chrX_random 4254772 4254811 -5044195 + A-rich Low_complexity Low_complexity 1 39 0 180 0 0 0 chrX_random 4254819 4254839 -5044167 + (TC)n Simple_repeat Simple_repeat 2 21 0 1857 184 34 3 chrX_random 4255317 4255671 -5043335 - MLT1A1 LTR MaLR 0 365 1 660 121 23 8 chrX_random 4257244 4257376 -5041630 + CT-rich Low_complexity Low_complexity 3 136 0 234 253 88 76 chrX_random 4257471 4257720 -5041286 + L1ME3 LINE L1 4102 4353 -1793 763 312 80 20 chrX_random 4257971 4258961 -5040045 + L1ME3 LINE L1 4890 5940 -222 192 158 0 0 chrX_random 4259054 4259092 -5039914 + (CA)n Simple_repeat Simple_repeat 1 38 0 296 285 88 0 chrX_random 4259385 4259522 -5039484 + L1ME LINE L1 5591 5739 -382 1997 153 7 0 chrX_random 4259970 4260271 -5038735 - AluSx SINE Alu -9 303 1 421 206 24 0 chrX_random 4261172 4261298 -5037708 + CT-rich Low_complexity Low_complexity 4 132 0 24 0 0 0 chrX_random 4261299 4261323 -5037683 + AT_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chrX_random 4261379 4261407 -5037599 + AT_rich Low_complexity Low_complexity 1 28 0 408 318 116 72 chrX_random 4261491 4261837 -5037169 + L3b LINE CR1 1190 1550 -33 1920 138 59 36 chrX_random 4262691 4263047 -5035959 - THE1B LTR MaLR 0 364 1 2468 175 86 0 chrX_random 4263102 4263623 -5035383 - L1MC3 LINE L1 -2 7783 7218 284 295 54 0 chrX_random 4263623 4263735 -5035271 - MLT1F1 LTR MaLR -415 152 35 410 122 10 41 chrX_random 4263735 4263833 -5035173 - L1MC3 LINE L1 -688 7097 7003 929 129 123 7 chrX_random 4265112 4265267 -5033739 - AluJb SINE Alu -11 301 129 256 256 58 0 chrX_random 4267258 4267344 -5031662 + MIR SINE MIR 63 153 -109 199 288 113 25 chrX_random 4267598 4267678 -5031328 + MIR SINE MIR 60 146 -62 405 0 0 0 chrX_random 4268536 4268581 -5030425 + (TG)n Simple_repeat Simple_repeat 1 45 0 1743 159 58 10 chrX_random 4269120 4269415 -5029591 + AluJb SINE Alu 1 309 -3 190 159 11 182 chrX_random 4269530 4269618 -5029388 - MER5A DNA MER1_type 0 189 117 * 324 275 0 33 chrX_random 4269552 4269643 -5029363 + MER5A DNA MER1_type 22 109 -80 2143 104 0 7 chrX_random 4270162 4270451 -5028555 - AluSc SINE Alu -20 289 3 199 91 91 127 chrX_random 4270456 4270511 -5028495 - MER5B DNA MER1_type -119 59 7 33 25 0 0 chrX_random 4270549 4270589 -5028417 + AT_rich Low_complexity Low_complexity 1 40 0 195 186 0 0 chrX_random 4270620 4270663 -5028343 + (CA)n Simple_repeat Simple_repeat 1 43 0 1116 182 77 72 chrX_random 4270683 4271046 -5027960 + MLT1A1 LTR MaLR 1 365 0 1326 224 38 19 chrX_random 4271253 4271531 -5027475 - LTR40b LTR ERVL -2 460 168 2561 128 39 7 chrX_random 4271531 4271945 -5027061 + MSTA LTR MaLR 2 428 0 1326 224 38 19 chrX_random 4271945 4272052 -5026954 - LTR40b LTR ERVL -294 168 64 225 330 73 44 chrX_random 4272980 4273186 -5025820 - MIR SINE MIR -31 231 20 314 341 72 6 chrX_random 4273640 4273807 -5025199 - L1ME4a LINE L1 -218 5903 5726 384 248 248 7 chrX_random 4274631 4274776 -5024230 - MER5A DNA MER1_type -1 188 9 264 200 33 0 chrX_random 4274792 4274852 -5024154 - MER5B DNA MER1_type 0 178 117 898 184 37 50 chrX_random 4274876 4275094 -5023912 + MER20 DNA MER1_type 1 215 -4 1633 171 0 65 chrX_random 4276111 4276421 -5022585 + AluJb SINE Alu 1 290 -22 213 161 35 210 chrX_random 4276894 4277037 -5021969 - MER5A DNA MER1_type -51 138 21 288 0 0 0 chrX_random 4277590 4277622 -5021384 + (TG)n Simple_repeat Simple_repeat 2 33 0 21 36 0 0 chrX_random 4277656 4277684 -5021322 + AT_rich Low_complexity Low_complexity 1 28 0 2020 142 0 14 chrX_random 4278554 4278850 -5020156 + AluSx SINE Alu 7 298 -14 374 0 22 0 chrX_random 4279253 4279299 -5019707 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 744 122 0 0 chrX_random 4280239 4280354 -5018652 + FRAM SINE Alu 54 168 -8 524 207 0 0 chrX_random 4282270 4282352 -5016654 + T-rich Low_complexity Low_complexity 1 82 0 266 173 37 12 chrX_random 4282351 4282432 -5016574 + CT-rich Low_complexity Low_complexity 1 83 0 * 598 178 41 206 chrX_random 4282693 4282985 -5016021 + LTR28 LTR ERV1 1 179 -841 542 202 32 218 chrX_random 4282993 4283459 -5015547 + MER52A LTR ERV1 340 1445 -25 1999 142 61 3 chrX_random 4283942 4284286 -5014720 + THE1B LTR MaLR 1 364 0 1613 124 38 4 chrX_random 4284421 4284687 -5014319 - L1MB3 LINE L1 -1 6182 5908 817 101 7 2 chrX_random 4284692 4284828 -5014178 - L1PBa LINE L1 -4188 2674 2493 4276 141 1 17 chrX_random 4284843 4285594 -5013412 - L1P LINE L1 -3012 3134 2396 219 336 199 18 chrX_random 4286657 4286999 -5012007 + L2 LINE L2 2481 2884 -430 268 348 44 37 chrX_random 4287307 4287442 -5011564 + L2 LINE L2 3137 3272 0 351 272 0 0 chrX_random 4287957 4288060 -5010946 + (TG)n Simple_repeat Simple_repeat 1 103 0 1583 208 157 2 chrX_random 4289534 4289929 -5009077 + MLT2B1 LTR ERVL 1 456 -64 219 231 0 0 chrX_random 4289935 4290043 -5008963 + (TA)n Simple_repeat Simple_repeat 2 109 0 310 275 73 0 chrX_random 4290043 4290152 -5008854 + L1MC4 LINE L1 6586 6702 -1340 1387 259 28 41 chrX_random 4290598 4290834 -5008172 + MER119 DNA MER1_type 50 288 -295 2638 97 8 21 chrX_random 4290834 4291214 -5007792 + THE1C LTR MaLR 1 375 0 1387 259 28 41 chrX_random 4291214 4291518 -5007488 + MER119 DNA MER1_type 288 583 0 1938 156 0 13 chrX_random 4291741 4292056 -5006950 + AluJo SINE Alu 1 311 -1 762 238 4 61 chrX_random 4293787 4294018 -5004988 + MER20 DNA MER1_type 2 219 0 217 328 117 16 chrX_random 4294072 4294200 -5004806 - MIR SINE MIR -30 232 92 270 336 72 8 chrX_random 4294348 4294473 -5004533 - MIR SINE MIR -115 147 15 366 221 21 142 chrX_random 4294511 4294701 -5004305 + MLT1D LTR MaLR 1 167 -338 257 239 0 14 chrX_random 4295096 4295167 -5003839 + LTR67 LTR ERVL 427 496 -61 237 83 0 0 chrX_random 4295203 4295239 -5003767 + (TATG)n Simple_repeat Simple_repeat 1 36 0 811 159 28 0 chrX_random 4296425 4296570 -5002436 - MER20 DNA MER1_type -64 155 7 327 338 89 50 chrX_random 4298200 4298603 -5000403 + L2 LINE L2 2222 2640 -674 184 200 156 0 chrX_random 4299239 4299284 -4999722 - MIR SINE MIR -8 254 203 1271 314 71 43 chrX_random 4299689 4301175 -4997831 + L1ME LINE L1 285 1812 -4584 923 248 96 8 chrX_random 4301223 4301771 -4997235 + L1ME LINE L1 5033 5640 -595 23 68 0 0 chrX_random 4302489 4302533 -4996473 + AT_rich Low_complexity Low_complexity 1 44 0 2037 127 26 32 chrX_random 4302552 4302929 -4996077 + THE1C LTR MaLR 1 375 0 487 175 306 0 chrX_random 4303481 4303641 -4995365 + MER3 DNA MER1_type 1 209 0 313 224 7 147 chrX_random 4303753 4303896 -4995110 + MER20 DNA MER1_type 4 126 -93 853 185 6 29 chrX_random 4305124 4305297 -4993709 - FRAM SINE Alu -3 173 5 216 0 0 0 chrX_random 4306301 4306325 -4992681 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 630 365 8 8 chrX_random 4307190 4307450 -4991556 + MIR SINE MIR 3 262 0 246 283 243 13 chrX_random 4308736 4308888 -4990118 - MER5A DNA MER1_type 0 189 3 186 249 58 116 chrX_random 4309155 4309328 -4989678 + L2 LINE L2 3046 3208 -105 669 96 35 0 chrX_random 4309397 4309512 -4989494 + GA-rich Low_complexity Low_complexity 1 119 0 797 245 106 9 chrX_random 4309512 4310006 -4989000 - L1ME LINE L1 -525 5639 5095 195 211 33 11 chrX_random 4310886 4310976 -4988030 + GA-rich Low_complexity Low_complexity 5 96 0 2850 159 27 0 chrX_random 4311896 4312413 -4986593 - L1MA10 LINE L1 -309 5880 5350 1913 153 53 38 chrX_random 4312421 4312736 -4986270 + L1MA10 LINE L1 5874 6208 -126 2357 98 42 25 chrX_random 4312736 4313094 -4985912 - THE1B LTR MaLR 0 364 1 1913 153 53 38 chrX_random 4313094 4313221 -4985785 + L1MA10 LINE L1 6208 6332 -2 2118 116 0 3 chrX_random 4313296 4313613 -4985393 + AluSx SINE Alu 2 317 0 351 164 30 0 chrX_random 4313614 4313681 -4985325 - LTR51 LTR ERV1 -462 209 141 5897 143 9 27 chrX_random 4313789 4314861 -4984145 + Tigger1 DNA MER2_type 1366 2418 0 202 234 0 0 chrX_random 4315253 4315300 -4983706 + (TAA)n Simple_repeat Simple_repeat 1 47 0 193 263 91 69 chrX_random 4315466 4315641 -4983365 - L3 LINE CR1 -222 1355 1177 2089 94 24 3 chrX_random 4316075 4316404 -4982602 + THE1A LTR MaLR 18 353 -2 630 73 0 10 chrX_random 4316406 4316502 -4982504 + THE1A-int LTR MaLR 1 95 -1485 1071 141 40 5 chrX_random 4317067 4317266 -4981740 + L1MB1 LINE L1 5850 6055 -134 1070 132 55 28 chrX_random 4317266 4317526 -4981480 - MLT2A2 LTR ERVL 0 453 290 1414 111 36 32 chrX_random 4318310 4318563 -4980443 + THE1C LTR MaLR 122 375 0 232 286 24 12 chrX_random 4318563 4318646 -4980360 - MLT1H LTR MaLR -45 504 421 807 302 41 13 chrX_random 4318679 4318980 -4980026 - MLT1H LTR MaLR -196 353 1 22 56 0 0 chrX_random 4319118 4319154 -4979852 + AT_rich Low_complexity Low_complexity 1 36 0 419 174 0 41 chrX_random 4319841 4320013 -4978993 + CT-rich Low_complexity Low_complexity 1 165 0 212 167 0 19 chrX_random 4320025 4320079 -4978927 + CT-rich Low_complexity Low_complexity 1 53 0 7282 119 24 10 chrX_random 4322133 4323319 -4975687 + Tigger1 DNA MER2_type 26 1227 -1191 481 318 21 34 chrX_random 4326020 4326256 -4972750 - MIR SINE MIR 0 262 30 1532 78 60 0 chrX_random 4326300 4326517 -4972489 + MER4E LTR ERV1 537 766 0 3310 134 30 2 chrX_random 4326576 4327115 -4971891 - MER4E LTR ERV1 -225 554 1 1866 166 0 0 chrX_random 4327115 4327428 -4971578 - MER7A DNA MER2_type -34 312 2 375 206 178 7 chrX_random 4327429 4327575 -4971431 + MER2 DNA MER2_type 151 321 -24 590 240 16 0 chrX_random 4327589 4327718 -4971288 - MER2 DNA MER2_type -213 132 2 408 291 133 18 chrX_random 4327918 4328203 -4970803 - MLT1H LTR MaLR -220 329 12 677 262 0 0 chrX_random 4328950 4329095 -4969911 - FRAM SINE Alu -34 142 1 1485 170 42 3 chrX_random 4329394 4329705 -4969301 - MLT1B LTR MaLR -63 327 5 187 257 14 40 chrX_random 4330317 4330391 -4968615 - L3 LINE CR1 -709 868 797 211 355 99 0 chrX_random 4330721 4330842 -4968164 + MIR SINE MIR 79 211 -51 * 623 325 8 38 chrX_random 4330799 4331039 -4967967 - MIR SINE MIR -2 260 28 526 246 12 0 chrX_random 4331165 4331332 -4967674 + CT-rich Low_complexity Low_complexity 3 171 0 198 209 0 0 chrX_random 4332101 4332144 -4966862 + (CATG)n Simple_repeat Simple_repeat 1 43 0 189 0 0 0 chrX_random 4332679 4332700 -4966306 + (CA)n Simple_repeat Simple_repeat 2 22 0 23 0 0 0 chrX_random 4333037 4333060 -4965946 + AT_rich Low_complexity Low_complexity 1 23 0 235 289 0 0 chrX_random 4333089 4333141 -4965865 + (CA)n Simple_repeat Simple_repeat 2 53 0 244 278 124 33 chrX_random 4333270 4333576 -4965430 + MLT1G1 LTR MaLR 83 416 -179 231 320 0 0 chrX_random 4333683 4333761 -4965245 + C-rich Low_complexity Low_complexity 1 78 0 537 286 37 6 chrX_random 4334597 4334758 -4964248 + MIR SINE MIR 60 225 -37 1756 246 41 35 chrX_random 4334803 4335343 -4963663 + LTR26 LTR ERV1 61 603 0 247 291 48 10 chrX_random 4336605 4336708 -4962298 - MIR SINE MIR -35 227 121 604 90 13 0 chrX_random 4337124 4337202 -4961804 + MADE1 DNA Mariner 2 80 0 252 354 26 18 chrX_random 4338730 4338843 -4960163 + MIR SINE MIR 35 148 -60 2161 103 0 0 chrX_random 4339017 4339326 -4959680 + AluSx SINE Alu 1 309 0 1069 207 4 59 chrX_random 4339465 4339702 -4959304 + MER58A DNA MER1_type 1 224 0 389 171 29 0 chrX_random 4339931 4340001 -4959005 + MER5A DNA MER1_type 41 112 -77 448 313 103 52 chrX_random 4340577 4341041 -4957965 - HAL1 LINE L1 -775 1732 1245 2702 98 28 8 chrX_random 4341190 4341547 -4957459 - THE1B LTR MaLR 0 364 1 2052 134 0 0 chrX_random 4342716 4343028 -4955978 - AluSx SINE Alu 0 312 1 1612 154 0 69 chrX_random 4344208 4344513 -4954493 - AluJo SINE Alu -28 284 1 1613 27 0 0 chrX_random 4346456 4346641 -4952365 - AluYb8 SINE Alu 0 318 134 25 83 0 0 chrX_random 4346901 4346961 -4952045 + AT_rich Low_complexity Low_complexity 1 60 0 2726 89 46 0 chrX_random 4347717 4348065 -4950941 - THE1B LTR MaLR 0 364 1 336 143 0 0 chrX_random 4348296 4348345 -4950661 - MLT2B3 LTR ERVL 0 554 506 346 175 38 19 chrX_random 4348350 4348510 -4950496 + (TAGA)n Simple_repeat Simple_repeat 2 164 0 397 161 0 76 chrX_random 4349311 4349437 -4949569 + MER5B DNA MER1_type 1 163 -15 181 340 20 53 chrX_random 4350209 4350359 -4948647 + MIR SINE MIR 118 262 0 1558 172 12 56 chrX_random 4350765 4351084 -4947922 + AluJo SINE Alu 1 305 -7 240 283 23 23 chrX_random 4351225 4351398 -4947608 + (TTTG)n Simple_repeat Simple_repeat 4 176 0 231 236 0 18 chrX_random 4351646 4351701 -4947305 + (CATATA)n Simple_repeat Simple_repeat 6 59 0 239 167 51 0 chrX_random 4351706 4351767 -4947239 - MER21B LTR ERV1 -539 392 273 258 81 0 0 chrX_random 4351767 4351804 -4947202 + (CA)n Simple_repeat Simple_repeat 2 38 0 3450 210 104 19 chrX_random 4351804 4352544 -4946462 + MER21A LTR ERV1 20 822 -109 1157 80 0 58 chrX_random 4352544 4352732 -4946274 + THE1B LTR MaLR 1 177 -187 210 261 4 69 chrX_random 4353759 4353965 -4945041 + C-rich Low_complexity Low_complexity 1 192 0 24 0 0 0 chrX_random 4354221 4354245 -4944761 + AT_rich Low_complexity Low_complexity 1 24 0 2172 116 3 0 chrX_random 4354584 4354885 -4944121 - AluSp SINE Alu -11 302 1 446 322 5 34 chrX_random 4355077 4355620 -4943386 + CT-rich Low_complexity Low_complexity 1 526 0 1583 157 46 91 chrX_random 4355749 4356100 -4942906 - MER7A DNA MER2_type -12 334 2 346 340 20 20 chrX_random 4356147 4356297 -4942709 - MIR SINE MIR -1 261 112 294 248 133 44 chrX_random 4356499 4356612 -4942394 + MIR SINE MIR 93 215 -47 1149 93 5 98 chrX_random 4406792 4406985 -4892021 - AluSp SINE Alu -138 175 1 614 159 19 0 chrX_random 4407400 4407507 -4891499 + L1MA9 LINE L1 6199 6307 -5 969 173 6 0 chrX_random 4407631 4407793 -4891213 + Charlie3 DNA MER1_type 1 163 -2547 21 0 0 0 chrX_random 4407998 4408019 -4890987 + AT_rich Low_complexity Low_complexity 1 21 0 6374 52 0 20 chrX_random 4408228 4408611 -4890395 - L1PA6 LINE L1 0 6154 5792 2695 36 0 0 chrX_random 4408611 4408915 -4890091 - AluY SINE Alu -7 304 1 6374 52 0 20 chrX_random 4408915 4409294 -4889712 - L1PA6 LINE L1 -362 5792 5407 5119 181 28 19 chrX_random 4409399 4410937 -4888069 - L1M3 LINE L1 -389 5782 4223 1223 128 6 6 chrX_random 4411865 4412045 -4886961 + Charlie3 DNA MER1_type 2527 2706 -4 229 325 39 0 chrX_random 4412201 4412278 -4886728 + L2 LINE L2 2715 2794 -520 210 288 0 30 chrX_random 4412374 4412440 -4886566 + L2 LINE L2 3141 3204 -68 256 229 43 29 chrX_random 4412587 4412657 -4886349 + L2 LINE L2 3243 3313 0 1247 189 77 89 chrX_random 4413028 4413133 -4885873 + MER96B DNA MER1_type? 4 109 -308 3178 105 7 7 chrX_random 4413133 4413572 -4885434 - L1PA13 LINE L1 -1 6162 5724 1247 189 77 89 chrX_random 4413572 4413883 -4885123 + MER96B DNA MER1_type? 109 415 -2 21 0 0 0 chrX_random 4413985 4414006 -4885000 + AT_rich Low_complexity Low_complexity 1 21 0 297 264 28 0 chrX_random 4414121 4414193 -4884813 + MER20 DNA MER1_type 146 219 0 2087 134 10 3 chrX_random 4414331 4414665 -4884341 + AluSx SINE Alu 1 312 0 180 0 0 0 chrX_random 4414727 4414747 -4884259 + (T)n Simple_repeat Simple_repeat 1 20 0 5640 69 34 79 chrX_random 4415363 4416533 -4882473 + SVA Other Other 4 866 -520 1754 195 7 0 chrX_random 4417293 4417601 -4881405 - AluJo SINE Alu -2 310 1 517 279 73 27 chrX_random 4417771 4417990 -4881016 + MIR SINE MIR 28 256 -6 1145 206 106 43 chrX_random 4418304 4418654 -4880352 - L1MB7 LINE L1 0 6184 5813 1699 129 22 4 chrX_random 4418745 4419017 -4879989 + L1MA8 LINE L1 6008 6284 -7 288 296 14 0 chrX_random 4419376 4419447 -4879559 + L2 LINE L2 3201 3272 0 590 126 34 42 chrX_random 4419934 4420053 -4878953 + L1MB2 LINE L1 6052 6169 -2 1200 201 29 32 chrX_random 4421103 4421416 -4877590 - MER33 DNA MER1_type -12 312 1 229 348 49 24 chrX_random 4421822 4421986 -4877020 - L3b LINE CR1 -116 1467 1300 189 74 0 0 chrX_random 4422725 4422752 -4876254 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 325 167 26 0 chrX_random 4422770 4422848 -4876158 + (CTAGGG)n Simple_repeat Simple_repeat 1 80 0 567 285 99 43 chrX_random 4423377 4423752 -4875254 + MLT1J1 LTR MaLR 40 435 -11 306 231 0 0 chrX_random 4424116 4424181 -4874825 + HsTC2 DNA Tc2 1830 1894 -4 1136 256 93 0 chrX_random 4424913 4425037 -4873969 + MER58B DNA MER1_type 1 112 -2308 1606 183 14 24 chrX_random 4425037 4425332 -4873674 + AluJo SINE Alu 1 292 -20 1136 256 93 0 chrX_random 4425332 4425519 -4873487 + MER58B DNA MER1_type 112 341 0 373 263 158 53 chrX_random 4425534 4425686 -4873320 + MER5A DNA MER1_type 22 189 0 2641 160 11 34 chrX_random 4425788 4426225 -4872781 - MSTC LTR MaLR 0 428 2 26 30 0 0 chrX_random 4426537 4426570 -4872436 + AT_rich Low_complexity Low_complexity 1 33 0 2313 128 19 27 chrX_random 4426583 4426950 -4872056 + THE1B LTR MaLR 1 364 0 180 77 0 0 chrX_random 4429484 4429510 -4869496 + (GA)n Simple_repeat Simple_repeat 2 27 0 237 403 59 21 chrX_random 4430105 4430341 -4868665 - L3 LINE CR1 -1090 487 243 787 219 265 4 chrX_random 4430767 4431046 -4867960 + L1MC4 LINE L1 7471 7822 -220 550 303 6 12 chrX_random 4431432 4431594 -4867412 + MER5A DNA MER1_type 1 161 -28 207 282 35 35 chrX_random 4431596 4431681 -4867325 - L2 LINE L2 -2 3311 3227 709 163 108 0 chrX_random 4431688 4431817 -4867189 + L1MC/D LINE L1 5545 5687 -657 4066 82 0 4 chrX_random 4431819 4432346 -4866660 + LTR17 LTR ERV1 256 780 0 10567 54 14 86 chrX_random 4432346 4433875 -4865131 + HERV17 LTR ERV1 1 1420 -7206 4126 50 0 2 chrX_random 4433874 4434369 -4864637 + HERV17 LTR ERV1 3027 3520 -5106 * 7350 55 2 1 chrX_random 4434474 4435474 -4863532 - L1P LINE L1 -771 5375 4375 23 0 0 0 chrX_random 4436285 4436308 -4862698 + AT_rich Low_complexity Low_complexity 1 23 0 29 70 0 0 chrX_random 4436597 4436654 -4862352 + AT_rich Low_complexity Low_complexity 1 57 0 1949 139 7 7 chrX_random 4436763 4437064 -4861942 + AluSx SINE Alu 1 301 -11 602 258 235 27 chrX_random 4437430 4437728 -4861278 + L2 LINE L2 2131 2490 -824 549 327 59 11 chrX_random 4437729 4438001 -4861005 - HERV16 LTR ERVL -2025 2971 2687 709 347 53 10 chrX_random 4438161 4438576 -4860430 - HERV16 LTR ERVL -3249 2515 2083 376 335 59 25 chrX_random 4438585 4438788 -4860218 - HERV16 LTR ERVL -3060 1936 1727 430 352 50 32 chrX_random 4438873 4439436 -4859570 - HERV16 LTR ERVL -3476 1520 948 1780 158 10 3 chrX_random 4439484 4439775 -4859231 + AluJo SINE Alu 4 296 -16 767 255 0 5 chrX_random 4439962 4440150 -4858856 + MER5A DNA MER1_type 1 187 -2 1425 159 34 4 chrX_random 4440935 4441174 -4857832 - AluJo SINE Alu -12 300 55 245 135 0 122 chrX_random 4441206 4441280 -4857726 - LTR48 LTR ERV1 -72 715 459 741 206 21 26 chrX_random 4441554 4441743 -4857263 - MER39 LTR ERV1 -260 447 260 204 40 0 0 chrX_random 4442775 4442800 -4856206 + (TCCC)n Simple_repeat Simple_repeat 4 28 0 630 204 6 11 chrX_random 4442883 4443064 -4855942 + CT-rich Low_complexity Low_complexity 1 180 0 2532 27 3 0 chrX_random 4443185 4443486 -4855520 + HERV17 LTR ERV1 3602 3903 -4723 * 12719 55 4 2 chrX_random 4443477 4445119 -4853887 + HERV17 LTR ERV1 6980 8623 -3 2623 46 0 0 chrX_random 4445122 4445446 -4853560 + LTR17 LTR ERV1 1 324 -456 2509 142 52 11 chrX_random 4445456 4445920 -4853086 + L1MC1 LINE L1 5675 6157 -176 22 0 0 0 chrX_random 4445953 4445975 -4853031 + AT_rich Low_complexity Low_complexity 1 22 0 236 217 14 0 chrX_random 4446069 4446138 -4852868 + Charlie2a DNA MER1_type 1597 1666 -1196 25 65 0 0 chrX_random 4446138 4446184 -4852822 + AT_rich Low_complexity Low_complexity 1 46 0 189 109 55 0 chrX_random 4446184 4446239 -4852767 + (TATAA)n Simple_repeat Simple_repeat 5 62 0 406 209 45 9 chrX_random 4446266 4446376 -4852630 + Charlie2a DNA MER1_type 2721 2834 -28 23 0 0 0 chrX_random 4447827 4447850 -4851156 + AT_rich Low_complexity Low_complexity 1 23 0 741 256 87 33 chrX_random 4448321 4448688 -4850318 + L1MEc LINE L1 869 1255 -5141 369 300 164 52 chrX_random 4448802 4449149 -4849857 - HAL1 LINE L1 -2106 401 16 208 274 85 19 chrX_random 4450703 4450809 -4848197 - L3b LINE CR1 -352 1231 1119 2072 172 18 3 chrX_random 4452105 4452489 -4846517 - MLT1B LTR MaLR 0 390 1 494 181 19 19 chrX_random 4453013 4453168 -4845838 + GA-rich Low_complexity Low_complexity 3 157 0 977 112 11 11 chrX_random 4453170 4453349 -4845657 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 205 182 0 0 chrX_random 4453359 4453392 -4845614 + polypurine Low_complexity Low_complexity 4 36 0 229 135 0 0 chrX_random 4454201 4454238 -4844768 + L1PB4 LINE L1 6108 6144 -12 306 125 0 0 chrX_random 4454381 4454429 -4844577 + (TCCC)n Simple_repeat Simple_repeat 3 50 0 2236 110 7 10 chrX_random 4454429 4454739 -4844267 - AluSx SINE Alu -3 309 1 334 127 79 0 chrX_random 4454740 4454803 -4844203 - MER5A DNA MER1_type -113 76 9 370 182 182 0 chrX_random 4455160 4455237 -4843769 + MER5A DNA MER1_type 11 101 -88 245 309 73 20 chrX_random 4455237 4455441 -4843565 + L1MEd LINE L1 606 820 -5299 338 321 52 20 chrX_random 4455816 4456065 -4842941 + L1ME3 LINE L1 6 262 -5857 752 166 0 55 chrX_random 4456136 4456281 -4842725 - AluJo SINE Alu -175 137 1 6036 91 41 28 chrX_random 4456525 4457666 -4841340 - L1PA14 LINE L1 0 6161 5010 263 350 42 7 chrX_random 4457667 4457810 -4841196 + L1ME3 LINE L1 580 727 -5392 366 266 324 12 chrX_random 4457917 4458090 -4840916 - MIR SINE MIR -24 238 12 362 267 150 33 chrX_random 4458142 4458382 -4840624 + L1ME3 LINE L1 990 1257 -4862 246 207 0 0 chrX_random 4458471 4458529 -4840477 + (CA)n Simple_repeat Simple_repeat 1 58 0 413 339 48 20 chrX_random 4458578 4458829 -4840177 + L1ME3 LINE L1 1452 1709 -4601 376 301 176 4 chrX_random 4458824 4459080 -4839926 + L1ME3 LINE L1 4591 4890 -1239 * 729 246 49 79 chrX_random 4459081 4459512 -4839494 + L1ME3 LINE L1 5302 5719 -434 201 175 0 0 chrX_random 4459616 4459656 -4839350 + (TG)n Simple_repeat Simple_repeat 1 40 0 204 235 0 0 chrX_random 4459695 4459746 -4839260 + (TA)n Simple_repeat Simple_repeat 1 51 0 24 32 0 0 chrX_random 4460038 4460069 -4838937 + AT_rich Low_complexity Low_complexity 1 31 0 193 0 61 30 chrX_random 4460150 4460183 -4838823 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2426 29 0 0 chrX_random 4460183 4460462 -4838544 - AluY SINE Alu -32 279 1 25 31 0 0 chrX_random 4460469 4460501 -4838505 + AT_rich Low_complexity Low_complexity 1 32 0 1763 158 25 7 chrX_random 4462030 4462314 -4836692 + AluJo SINE Alu 1 289 -23 22 0 0 0 chrX_random 4462315 4462337 -4836669 + AT_rich Low_complexity Low_complexity 1 22 0 254 331 116 17 chrX_random 4462607 4462779 -4836227 + MIR SINE MIR 3 191 -71 2421 75 9 0 chrX_random 4463490 4463812 -4835194 + L1PA10 LINE L1 5839 6163 -5 603 217 19 10 chrX_random 4464839 4465220 -4833786 + CT-rich Low_complexity Low_complexity 1 384 0 307 294 50 25 chrX_random 4465340 4465500 -4833506 + L1ME3 LINE L1 5928 6091 -54 22 0 0 0 chrX_random 4465552 4465574 -4833432 + AT_rich Low_complexity Low_complexity 1 22 0 1652 157 17 53 chrX_random 4465574 4465873 -4833133 + AluJo SINE Alu 1 288 -24 627 159 0 0 chrX_random 4466075 4466188 -4832818 + CT-rich Low_complexity Low_complexity 3 115 0 1959 156 0 3 chrX_random 4466190 4466491 -4832515 - AluSx SINE Alu -12 300 1 876 252 48 5 chrX_random 4467742 4467952 -4831054 - MER20 DNA MER1_type 0 219 1 263 263 38 68 chrX_random 4468235 4468368 -4830638 - L2 LINE L2 -505 2809 2681 2521 80 0 0 chrX_random 4468784 4469095 -4829911 + AluSx SINE Alu 1 311 -1 1049 24 0 0 chrX_random 4469221 4469345 -4829661 + L1PA5 LINE L1 6028 6151 -3 1407 152 27 35 chrX_random 4469451 4469707 -4829299 + AluJo SINE Alu 43 296 -16 249 111 0 48 chrX_random 4471629 4471692 -4827314 + (TA)n Simple_repeat Simple_repeat 1 60 0 188 398 9 9 chrX_random 4471818 4471926 -4827080 - L2 LINE L2 0 3313 3206 423 0 0 0 chrX_random 4472115 4472162 -4826844 + (TA)n Simple_repeat Simple_repeat 1 47 0 2119 173 14 33 chrX_random 4472438 4472745 -4826261 - LOR1b LTR ERV1 0 461 163 2438 74 0 10 chrX_random 4472745 4473043 -4825963 - AluSc SINE Alu -13 296 2 2119 173 14 33 chrX_random 4473043 4473163 -4825843 - LOR1b LTR ERV1 -298 163 42 1367 208 220 87 chrX_random 4473266 4474165 -4824841 - LTR28 LTR ERV1 -1 1019 1 356 306 54 43 chrX_random 4474167 4474425 -4824581 + L2 LINE L2 2716 2976 -338 1160 204 14 0 chrX_random 4475694 4475910 -4823096 - MER20 DNA MER1_type 0 219 1 362 294 41 69 chrX_random 4476060 4476198 -4822808 - MIR SINE MIR -15 247 112 524 242 101 39 chrX_random 4476198 4476376 -4822630 - MER5A DNA MER1_type 0 189 1 362 294 41 69 chrX_random 4476376 4476483 -4822523 - MIR SINE MIR -150 112 3 21 0 0 0 chrX_random 4477940 4477961 -4821045 + AT_rich Low_complexity Low_complexity 1 21 0 293 356 46 19 chrX_random 4478129 4478390 -4820616 + L2 LINE L2 1637 1904 -1410 912 223 65 65 chrX_random 4478416 4478844 -4820162 + L1ME1 LINE L1 5722 6152 -14 3910 107 25 66 chrX_random 4478844 4479525 -4819481 + MER39B LTR ERV1 1 653 0 912 223 65 65 chrX_random 4479525 4479541 -4819465 + L1ME1 LINE L1 6151 6166 0 22 35 0 0 chrX_random 4480980 4481009 -4817997 + AT_rich Low_complexity Low_complexity 1 29 0 608 293 31 54 chrX_random 4481027 4481286 -4817720 - MIR SINE MIR -2 260 8 332 283 28 19 chrX_random 4483365 4483462 -4815544 + MLT2E LTR ERVL 19 116 -512 1497 147 21 35 chrX_random 4483462 4483748 -4815258 + LTR39 LTR ERV1 1 282 -501 1620 214 54 2 chrX_random 4483930 4484314 -4814692 + LTR39 LTR ERV1 297 783 0 396 374 18 13 chrX_random 4484413 4484640 -4814366 + MLT2F LTR ERVL 230 457 -206 233 270 14 0 chrX_random 4484738 4484812 -4814194 + MLT2E LTR ERVL 196 270 -358 184 318 15 15 chrX_random 4484871 4484937 -4814069 - MIR SINE MIR -176 86 21 396 55 0 0 chrX_random 4486546 4486601 -4812405 + (CA)n Simple_repeat Simple_repeat 1 55 0 333 0 0 0 chrX_random 4486858 4486895 -4812111 + (TG)n Simple_repeat Simple_repeat 1 37 0 259 200 11 11 chrX_random 4486897 4486987 -4812019 + GA-rich Low_complexity Low_complexity 2 91 0 230 140 0 20 chrX_random 4486978 4487028 -4811978 + (GGA)n Simple_repeat Simple_repeat 2 50 0 * 261 133 0 147 chrX_random 4487304 4487379 -4811627 + MER21B LTR ERV1 1 64 -799 3399 204 41 34 chrX_random 4487414 4487647 -4811359 + MER21B LTR ERV1 18 248 -615 1272 217 19 53 chrX_random 4487647 4488025 -4810981 - MLT1A1 LTR MaLR 0 365 1 3399 204 41 34 chrX_random 4488025 4488101 -4810905 + MER21B LTR ERV1 248 322 -541 2500 108 14 3 chrX_random 4488101 4488470 -4810536 - THE1C LTR MaLR -2 373 1 3399 204 41 34 chrX_random 4488470 4488987 -4810019 + MER21B LTR ERV1 322 851 -12 1057 193 5 14 chrX_random 4489322 4489534 -4809472 + MER20 DNA MER1_type 5 214 -5 1983 155 0 3 chrX_random 4490132 4490428 -4808578 - AluSx SINE Alu -17 295 1 1606 175 0 71 chrX_random 4490751 4491077 -4807929 - AluJb SINE Alu -1 311 9 339 180 22 0 chrX_random 4491194 4491283 -4807723 - Charlie2 DNA MER1_type -37 2825 2735 23 0 0 0 chrX_random 4491864 4491887 -4807119 + AT_rich Low_complexity Low_complexity 1 23 0 189 435 24 24 chrX_random 4492396 4492566 -4806440 + L2 LINE L2 3006 3175 -97 746 102 0 25 chrX_random 4492593 4492711 -4806295 - FLAM_C SINE Alu -5 138 24 196 205 26 0 chrX_random 4492727 4492766 -4806240 + L2 LINE L2 3274 3313 0 2124 87 18 0 chrX_random 4493486 4493809 -4805197 - AluSg SINE Alu 0 328 1 544 262 154 0 chrX_random 4493939 4494088 -4804918 - MER5A DNA MER1_type -6 183 12 224 214 36 0 chrX_random 4494254 4494310 -4804696 + (TA)n Simple_repeat Simple_repeat 1 58 0 1530 137 0 0 chrX_random 4494310 4494544 -4804462 - MER46A DNA MER2_type 0 236 3 2048 205 51 8 chrX_random 4494938 4495406 -4803600 - LTR39 LTR ERV1 -2 781 294 625 103 0 0 chrX_random 4495507 4495594 -4803412 + THE1A LTR MaLR 269 355 0 3378 134 35 7 chrX_random 4495694 4496259 -4802747 - L1PA16 LINE L1 -3 6163 5583 247 209 11 22 chrX_random 4498156 4498247 -4800759 + L1MC4 LINE L1 6614 6703 -1339 284 224 8 136 chrX_random 4498286 4498411 -4800595 + MER21B LTR ERV1 1 109 -754 1733 254 77 47 chrX_random 4498444 4499132 -4799874 + MER21B LTR ERV1 98 806 -57 3347 147 92 43 chrX_random 4499236 4499986 -4799020 + LTR48 LTR ERV1 1 787 0 369 264 0 0 chrX_random 4500038 4500125 -4798881 + MIR SINE MIR 71 157 -105 487 248 131 44 chrX_random 4500353 4500559 -4798447 + MER58A DNA MER1_type 1 224 0 250 228 25 13 chrX_random 4501534 4501613 -4797393 + L1MC2 LINE L1 6254 6333 -11 2477 115 42 12 chrX_random 4501640 4502049 -4796957 + L1MC1 LINE L1 5911 6331 -2 21 36 0 0 chrX_random 4502077 4502105 -4796901 + AT_rich Low_complexity Low_complexity 1 28 0 1605 165 18 0 chrX_random 4502635 4502908 -4796098 - AluJo SINE Alu -1 311 34 21 0 0 0 chrX_random 4504094 4504115 -4794891 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chrX_random 4504739 4504769 -4794237 + AT_rich Low_complexity Low_complexity 1 30 0 231 146 0 0 chrX_random 4504876 4504917 -4794089 - L1PA16 LINE L1 -19 6147 6107 * 4674 241 30 19 chrX_random 4504915 4505790 -4793216 - L1PA12 LINE L1 -3091 4493 3629 2319 113 0 0 chrX_random 4505790 4506091 -4792915 - AluSx SINE Alu -11 301 1 4674 241 30 19 chrX_random 4506091 4507483 -4791523 - L1PA12 LINE L1 -3955 3629 2182 324 278 0 0 chrX_random 4507717 4507814 -4791192 - L1PA12 LINE L1 -5399 2182 2086 796 360 17 19 chrX_random 4507982 4508562 -4790444 - L1PA12 LINE L1 -6208 1366 788 23 33 0 0 chrX_random 4509184 4509214 -4789792 + AT_rich Low_complexity Low_complexity 1 30 0 206 342 13 0 chrX_random 4509863 4509942 -4789064 + L2 LINE L2 3195 3274 -39 312 94 0 0 chrX_random 4510126 4510179 -4788827 + (TG)n Simple_repeat Simple_repeat 2 54 0 286 321 72 10 chrX_random 4513180 4513389 -4785617 - LTR16A LTR ERVL 0 450 229 341 306 12 38 chrX_random 4514130 4514290 -4784716 - LTR16A LTR ERVL -242 208 53 218 254 60 0 chrX_random 4516358 4516425 -4782581 + MIR SINE MIR 133 203 -59 389 202 34 42 chrX_random 4517313 4517432 -4781574 + MIR SINE MIR 97 214 -48 202 255 20 0 chrX_random 4517846 4517897 -4781109 + L2 LINE L2 3243 3294 -19 2298 84 17 0 chrX_random 4518616 4518912 -4780094 - AluSg SINE Alu -9 301 1 11787 153 35 23 chrX_random 4519150 4522584 -4776422 - L1MA6 LINE L1 0 6300 2837 2208 243 23 11 chrX_random 4522583 4523351 -4775655 + L1MA6 LINE L1 3474 4257 -3308 * 342 354 68 57 chrX_random 4523354 4523707 -4775299 + L2 LINE L2 2916 3272 0 481 357 21 12 chrX_random 4523789 4524030 -4774976 + MIR SINE MIR 18 260 -2 5233 143 32 11 chrX_random 4524509 4525955 -4773051 - L1PB1 LINE L1 -1 6150 4676 22 0 0 0 chrX_random 4526971 4526993 -4772013 + AT_rich Low_complexity Low_complexity 1 22 0 823 187 0 75 chrX_random 4527600 4527787 -4771219 + MER20 DNA MER1_type 16 188 -31 207 293 73 49 chrX_random 4527947 4528070 -4770936 - MIR SINE MIR -67 141 16 390 42 0 0 chrX_random 4528105 4528153 -4770853 + (TG)n Simple_repeat Simple_repeat 1 48 0 7109 54 5 32 chrX_random 4529287 4530351 -4768655 + SVA Other Other 433 1386 0 25 0 0 0 chrX_random 4530351 4530376 -4768630 + AT_rich Low_complexity Low_complexity 1 25 0 2087 135 0 0 chrX_random 4530681 4530985 -4768021 - AluSx SINE Alu -8 304 1 3020 74 19 83 chrX_random 4531081 4531553 -4767453 - MLT2A1 LTR ERVL 0 444 3 200 229 29 29 chrX_random 4531719 4531789 -4767217 + CT-rich Low_complexity Low_complexity 3 72 0 561 133 0 0 chrX_random 4532663 4532761 -4766245 - MER31A LTR ERV1 0 485 388 272 247 22 22 chrX_random 4532801 4532890 -4766116 + GA-rich Low_complexity Low_complexity 2 90 0 2372 111 5 39 chrX_random 4532894 4533301 -4765705 - MER31A LTR ERV1 -92 393 1 354 23 0 0 chrX_random 4533497 4533540 -4765466 + (TG)n Simple_repeat Simple_repeat 1 43 0 183 42 0 0 chrX_random 4533539 4533563 -4765443 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 2183 114 0 7 chrX_random 4533681 4533980 -4765026 - AluSg SINE Alu -11 299 3 2442 156 24 69 chrX_random 4534845 4535384 -4763622 + MLT2B3 LTR ERVL 1 515 -39 752 156 6 17 chrX_random 4535410 4535589 -4763417 + (TCTA)n Simple_repeat Simple_repeat 4 180 0 182 190 0 17 chrX_random 4535606 4535664 -4763342 + (TCTA)n Simple_repeat Simple_repeat 3 59 0 566 169 20 14 chrX_random 4535678 4535826 -4763180 + (TCTA)n Simple_repeat Simple_repeat 1 149 0 278 162 0 73 chrX_random 4535826 4535894 -4763112 + MLT2B3 LTR ERVL 458 554 0 1183 213 66 39 chrX_random 4536386 4536765 -4762241 - LTR10C LTR ERV1 -42 591 188 1033 145 0 54 chrX_random 4538392 4538578 -4760428 - AluJb SINE Alu 0 312 137 1791 193 7 0 chrX_random 4538616 4538912 -4760094 + AluJo SINE Alu 1 298 -14 447 260 73 26 chrX_random 4539102 4539294 -4759712 + MIR SINE MIR 32 232 -30 1654 179 7 13 chrX_random 4539802 4540104 -4758902 + AluJo SINE Alu 3 302 -10 600 249 30 67 chrX_random 4540317 4540586 -4758420 + MLT1J1 LTR MaLR 13 271 -175 1999 135 27 10 chrX_random 4540605 4541450 -4757556 + L1MA7 LINE L1 5178 6275 -16 575 149 0 0 chrX_random 4541450 4541555 -4757451 + L1MA7 LINE L1 6175 6281 -10 415 216 11 22 chrX_random 4542069 4542250 -4756756 + (TA)n Simple_repeat Simple_repeat 1 179 0 410 175 34 23 chrX_random 4542289 4542466 -4756540 + (TA)n Simple_repeat Simple_repeat 2 180 0 267 31 0 0 chrX_random 4544454 4544486 -4754520 + (TG)n Simple_repeat Simple_repeat 2 33 0 42562 32 1 2 chrX_random 4544597 4550757 -4748249 + L1PA3 LINE L1 5 6155 0 2347 104 3 0 chrX_random 4551152 4551461 -4747545 + AluSx SINE Alu 1 310 -2 3963 192 33 37 chrX_random 4552146 4552304 -4746702 + L1MB2 LINE L1 5112 5269 -902 324 0 0 0 chrX_random 4552304 4552340 -4746666 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 3963 192 33 37 chrX_random 4552340 4553239 -4745767 + L1MB2 LINE L1 5269 6168 -3 1814 186 0 3 chrX_random 4553269 4553564 -4745442 + AluJb SINE Alu 7 300 -12 559 236 172 16 chrX_random 4554264 4554514 -4744492 - LTR50 LTR ERVL -506 289 1 466 228 10 0 chrX_random 4554686 4554787 -4744219 + MLT2C1 LTR ERVL 248 349 -48 478 0 16 16 chrX_random 4554803 4554866 -4744140 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 1321 150 54 111 chrX_random 4554876 4555262 -4743744 + MLT1A1 LTR MaLR 2 365 0 429 20 0 0 chrX_random 4555276 4555326 -4743680 + (TAGA)n Simple_repeat Simple_repeat 3 52 0 23 0 0 0 chrX_random 4557130 4557153 -4741853 + AT_rich Low_complexity Low_complexity 1 23 0 416 241 39 24 chrX_random 4557190 4557397 -4741609 - L1M4 LINE L1 -801 5345 5136 1813 160 32 29 chrX_random 4557943 4558317 -4740689 + THE1C LTR MaLR 1 375 0 809 163 0 30 chrX_random 4560121 4560256 -4738750 - FLAM_C SINE Alu 0 133 3 2145 135 33 33 chrX_random 4560948 4561312 -4737694 - THE1B LTR MaLR 0 364 1 1011 240 71 5 chrX_random 4561358 4561737 -4737269 + L1M4 LINE L1 4015 4418 -1728 1606 318 21 27 chrX_random 4561967 4562593 -4736413 - L2 LINE L2 -871 2443 1822 1535 134 4 13 chrX_random 4562735 4562966 -4736040 - AluJb SINE Alu -83 229 1 1849 155 47 0 chrX_random 4564760 4565056 -4733950 - AluJb SINE Alu -2 310 1 1444 287 99 2 chrX_random 4565066 4565659 -4733347 - L1ME3 LINE L1 -66 6096 5446 242 130 0 65 chrX_random 4566547 4566593 -4732413 - L2 LINE L2 -4 3309 3267 2329 116 36 28 chrX_random 4566738 4567099 -4731907 + THE1B LTR MaLR 1 364 0 22 35 0 0 chrX_random 4567999 4568028 -4730978 + AT_rich Low_complexity Low_complexity 1 29 0 730 215 51 11 chrX_random 4568501 4568678 -4730328 + MER58A DNA MER1_type 30 213 -11 208 209 23 0 chrX_random 4568691 4568734 -4730272 - MIR3 SINE MIR -50 158 115 1898 144 33 10 chrX_random 4568791 4569096 -4729910 + AluJb SINE Alu 1 312 0 1129 256 26 35 chrX_random 4569416 4569760 -4729246 + MER58B DNA MER1_type 1 341 0 226 204 0 0 chrX_random 4570295 4570344 -4728662 - MLT2D LTR ERVL 0 464 416 291 218 0 0 chrX_random 4570399 4570454 -4728552 + MLT2D LTR ERVL 317 371 -43 732 226 62 87 chrX_random 4570529 4570847 -4728159 - MLT2D LTR ERVL -48 416 105 761 181 0 0 chrX_random 4570847 4570980 -4728026 + L1MA2 LINE L1 6172 6304 0 732 226 62 87 chrX_random 4570980 4571078 -4727928 - MLT2D LTR ERVL -359 105 6 22 35 0 0 chrX_random 4571381 4571410 -4727596 + AT_rich Low_complexity Low_complexity 1 29 0 680 189 0 0 chrX_random 4571767 4571878 -4727128 + FRAM SINE Alu 36 146 -30 453 36 0 0 chrX_random 4571878 4571933 -4727073 + (TAAA)n Simple_repeat Simple_repeat 3 57 0 312 291 0 0 chrX_random 4571968 4572054 -4726952 + A-rich Low_complexity Low_complexity 5 90 0 1598 219 40 31 chrX_random 4572056 4572508 -4726498 + L1MC3 LINE L1 7329 7784 -1 25 51 0 0 chrX_random 4573870 4573909 -4725097 + AT_rich Low_complexity Low_complexity 1 39 0 391 344 205 12 chrX_random 4574156 4574415 -4724591 - L3 LINE CR1 -1088 489 181 1542 254 113 30 chrX_random 4575217 4575909 -4723097 - L1ME2 LINE L1 -66 6098 5350 425 223 127 6 chrX_random 4575918 4576075 -4722931 - L1MC4a LINE L1 -3 7805 7630 481 264 35 15 chrX_random 4576206 4576403 -4722603 - L1MC4a LINE L1 -1846 5962 5762 1371 165 29 62 chrX_random 4576502 4576628 -4722378 + AluJb SINE Alu 24 153 -159 2110 70 0 7 chrX_random 4576628 4576900 -4722106 + AluY SINE Alu 42 311 0 1371 165 29 62 chrX_random 4576900 4577046 -4721960 + AluJb SINE Alu 153 287 -25 196 347 42 21 chrX_random 4577725 4577820 -4721186 - L3 LINE CR1 -1269 308 212 466 221 21 0 chrX_random 4578820 4578965 -4720041 + GA-rich Low_complexity Low_complexity 2 149 0 267 273 45 66 chrX_random 4579473 4579671 -4719335 - LTR33 LTR ERVL -25 496 303 232 244 168 34 chrX_random 4580052 4580171 -4718835 + L2 LINE L2 3161 3295 -18 252 0 0 0 chrX_random 4581040 4581068 -4717938 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 6669 48 8 0 chrX_random 4581166 4582324 -4716682 + L1PA4 LINE L1 4925 6092 -63 3333 155 19 5 chrX_random 4982324 4982632 -4316374 - L1P4 LINE L1 -365 5800 5498 462 15 45 0 chrX_random 4982632 4982699 -4316307 + (TTTA)n Simple_repeat Simple_repeat 2 71 0 3333 155 19 5 chrX_random 4982699 4983324 -4315682 - L1P4 LINE L1 -667 5498 4854 671 260 25 30 chrX_random 4983310 4983595 -4315411 - L1M1 LINE L1 -5010 2479 1897 * 1689 295 49 59 chrX_random 4983637 4984403 -4314603 - L1M1 LINE L1 -6437 1052 267 2287 75 0 0 chrX_random 4984403 4984722 -4314284 - AluY SINE Alu 0 319 1 1689 295 49 59 chrX_random 4984722 4984975 -4314031 - L1M1 LINE L1 -7222 267 13 2009 147 0 0 chrX_random 4985287 4985580 -4313426 - AluSx SINE Alu -17 295 3 385 215 0 0 chrX_random 4985595 4985660 -4313346 - L2 LINE L2 -5 3308 3244 249 197 0 0 chrX_random 4986632 4986693 -4312313 + (TCCA)n Simple_repeat Simple_repeat 4 64 0 5721 143 16 6 chrX_random 4987490 4988102 -4310904 - L1MA8 LINE L1 -2 6289 5662 2211 176 76 2 chrX_random 4988102 4988499 -4310507 + MSTB LTR MaLR 1 426 0 5721 143 16 6 chrX_random 4988499 4988877 -4310129 - L1MA8 LINE L1 -629 5662 5289 253 192 0 0 chrX_random 4988886 4988938 -4310068 - MLT2A1 LTR ERVL 0 444 393 335 259 47 0 chrX_random 4988940 4989025 -4309981 + L1MC4 LINE L1 6614 6702 -1340 279 79 0 0 chrX_random 4989030 4989068 -4309938 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 3218 62 2 2 chrX_random 4989070 4989470 -4309536 - MLT2A1 LTR ERVL -44 400 1 1360 181 14 11 chrX_random 4989470 4989751 -4309255 - L1MA8 LINE L1 -867 5279 4998 1011 189 45 20 chrX_random 4989752 4989953 -4309053 + AluJo SINE Alu 83 288 -24 27 0 0 0 chrX_random 4989953 4989980 -4309026 + AT_rich Low_complexity Low_complexity 1 27 0 4949 174 16 55 chrX_random 4989981 4991145 -4307861 - L1MA8 LINE L1 -1137 5009 3892 38 0 0 0 chrX_random 4991249 4991287 -4307719 + AT_rich Low_complexity Low_complexity 1 38 0 269 0 0 0 chrX_random 4991287 4991324 -4307682 - L1PA4 LINE L1 -4 6151 6115 24 53 0 0 chrX_random 4992110 4992148 -4306858 + AT_rich Low_complexity Low_complexity 1 38 0 16102 210 15 19 chrX_random 4992867 4998087 -4300919 + L1PA15 LINE L1 1668 6859 -9 236 307 11 23 chrX_random 4998853 4998941 -4300065 - MIR3 SINE MIR -13 195 109 297 317 139 19 chrX_random 4998952 4999160 -4299846 + LTR16C LTR ERVL 258 490 -1 2505 66 3 0 chrX_random 4999279 4999583 -4299423 - AluSp SINE Alu -8 305 1 343 258 21 0 chrX_random 4999901 4999998 -4299008 - MLT1L LTR MaLR -7 608 510 722 341 36 9 chrX_random 5000175 5000594 -4298412 - L1MC4a LINE L1 -1932 5876 5447 9641 132 51 1 chrX_random 5000596 5003009 -4295997 - L1PA11 LINE L1 0 6174 3671 4273 236 44 27 chrX_random 5003020 5003982 -4295024 + L1PA11 LINE L1 2712 3703 -2443 387 98 0 0 chrX_random 5003982 5004043 -4294963 + (CA)n Simple_repeat Simple_repeat 2 62 0 4273 236 44 27 chrX_random 5004043 5004393 -4294613 + L1P LINE L1 3703 4046 -2100 290 130 0 0 chrX_random 5004415 5004461 -4294545 + AluJ/FLAM SINE Alu 54 99 -203 2189 95 7 3 chrX_random 5004654 5005156 -4293850 + L1P4 LINE L1 5071 5574 -600 488 275 23 59 chrX_random 5005308 5005502 -4293504 - MER5B DNA MER1_type 0 178 2 1061 163 21 38 chrX_random 5006190 5006429 -4292577 + MER106A DNA MER1_type 1 235 -1 1016 211 88 140 chrX_random 5007609 5008088 -4290918 + LTR33 LTR ERVL 56 509 -12 239 288 123 18 chrX_random 5011213 5011383 -4287623 + L2 LINE L2 2301 2488 -826 772 280 101 29 chrX_random 5011392 5011806 -4287200 + MLT1J1 LTR MaLR 1 444 -2 315 338 52 65 chrX_random 5011848 5012230 -4286776 + L2 LINE L2 2554 2930 -384 243 234 31 0 chrX_random 5012907 5012971 -4286035 - MIR SINE MIR -3 259 194 611 267 6 0 chrX_random 5013037 5013198 -4285808 + L1MEd LINE L1 20 181 -5938 2823 126 104 6 chrX_random 5013198 5013698 -4285308 - MER44D DNA MER2_type -1 604 1 807 253 64 0 chrX_random 5013754 5013956 -4285050 + LTR16C LTR ERVL 277 491 0 479 310 61 5 chrX_random 5013956 5014165 -4284841 + Charlie7 DNA MER1_type 263 483 -2129 380 266 138 61 chrX_random 5014299 5014537 -4284469 + HAL1 LINE L1 858 1076 -1431 2442 57 0 0 chrX_random 5014537 5014820 -4284186 + AluY SINE Alu 13 295 -16 192 77 0 0 chrX_random 5014822 5014848 -4284158 + (TA)n Simple_repeat Simple_repeat 1 26 0 380 266 138 61 chrX_random 5014848 5015184 -4283822 + HAL1 LINE L1 1076 1480 -1027 * 735 194 7 2 chrX_random 5015177 5015332 -4283674 + L1M3 LINE L1 5373 5526 -630 1638 194 3 0 chrX_random 5015334 5015623 -4283383 - L1M3 LINE L1 -378 5793 5504 615 202 42 18 chrX_random 5015639 5015807 -4283199 - L1M3 LINE L1 -835 5311 5140 353 333 36 7 chrX_random 5016977 5017115 -4281891 - MIR SINE MIR 0 262 121 457 351 55 15 chrX_random 5017176 5017378 -4281628 + MIR SINE MIR 32 241 -21 319 129 214 0 chrX_random 5017455 5017525 -4281481 - L1MB8 LINE L1 -1 6177 6093 2588 185 8 42 chrX_random 5017566 5017852 -4281154 - L1MB4 LINE L1 -22 6146 5852 1398 163 4 0 chrX_random 5017852 5018109 -4280897 + L1MA4 LINE L1 6034 6291 -9 2588 185 8 42 chrX_random 5018109 5018577 -4280429 - L1MB4 LINE L1 -316 5852 5450 529 212 80 124 chrX_random 5019590 5019816 -4279190 + MIR SINE MIR 32 247 -15 309 335 123 0 chrX_random 5020063 5020218 -4278788 + L3 LINE CR1 1389 1562 -15 494 347 20 0 chrX_random 5020972 5021171 -4277835 + MIR SINE MIR 5 207 -55 681 239 72 11 chrX_random 5021209 5021389 -4277617 + MIR SINE MIR 72 262 0 264 320 41 0 chrX_random 5022956 5023078 -4275928 - L1ME4a LINE L1 -24 6097 5971 417 265 193 62 chrX_random 5023100 5023406 -4275600 - L1ME4a LINE L1 -239 5882 5537 764 227 11 6 chrX_random 5023950 5024126 -4274880 + MER69A DNA AcHobo 1 177 0 2180 195 36 11 chrX_random 5024664 5025140 -4273866 - Charlie4a DNA MER1_type 0 508 21 2469 136 13 3 chrX_random 5025206 5025589 -4273417 + MLT1B LTR MaLR 1 387 -3 602 304 12 51 chrX_random 5025662 5025915 -4273091 + MIR SINE MIR 13 255 -7 308 281 0 156 chrX_random 5026143 5026278 -4272728 - L2 LINE L2 -1 3271 3158 3595 218 18 16 chrX_random 5126334 5127414 -4171592 - L1 LINE L1 -3025 4540 3460 439 151 12 0 chrX_random 5127422 5127508 -4171498 - L1 LINE L1 -5288 2277 2191 680 337 6 6 chrX_random 5127527 5127696 -4171310 - L1PA10 LINE L1 -9 6159 5991 214 359 0 0 chrX_random 5127698 5127762 -4171244 + C-rich Low_complexity Low_complexity 2 65 0 208 203 47 0 chrX_random 5127766 5127830 -4171176 + CT-rich Low_complexity Low_complexity 3 69 0 262 320 0 13 chrX_random 5128840 5128918 -4170088 + MIR3 SINE MIR 83 159 -49 1128 264 57 39 chrX_random 5129122 5129351 -4169655 - L2 LINE L2 0 3313 3090 285 29 0 0 chrX_random 5129351 5129385 -4169621 + (TG)n Simple_repeat Simple_repeat 1 34 0 1128 264 57 39 chrX_random 5129385 5129595 -4169411 - L2 LINE L2 -223 3090 2866 4838 191 27 11 chrX_random 5129701 5130985 -4168021 + L1M1 LINE L1 3419 4717 -2848 389 219 62 0 chrX_random 5130990 5131086 -4167920 - L1 LINE L1 -2808 3338 3237 1692 146 66 30 chrX_random 5131186 5131521 -4167485 - THE1C LTR MaLR -26 349 3 24 0 0 0 chrX_random 5131774 5131798 -4167208 + AT_rich Low_complexity Low_complexity 1 24 0 276 319 22 0 chrX_random 5131800 5131891 -4167115 - MIR3 SINE MIR -49 159 67 399 187 0 0 chrX_random 5132029 5132104 -4166902 - MER116 DNA Mariner -5 75 1 2053 101 7 17 chrX_random 5132189 5132498 -4166508 - AluSp SINE Alu 0 306 1 435 295 9 9 chrX_random 5133499 5133611 -4165395 + MIR SINE MIR 35 146 -62 9846 132 27 4 chrX_random 5134364 5135122 -4163884 - L1PA10 LINE L1 -130 7457 6718 369 0 0 0 chrX_random 5135122 5135163 -4163843 + (TC)n Simple_repeat Simple_repeat 2 42 0 9846 132 27 4 chrX_random 5135163 5136256 -4162750 - L1PA10 LINE L1 -869 6718 644 10709 133 58 28 chrX_random 5136410 5138340 -4160666 - L1M1 LINE L1 -4161 3404 1415 7983 127 70 5 chrX_random 5138445 5139915 -4159091 + L1MA3 LINE L1 2184 3744 -3821 4159 109 73 11 chrX_random 5139894 5140603 -4158403 + L1MA3 LINE L1 6965 7717 -7 * 9007 185 5 9 chrX_random 5140768 5140870 -4158136 - L1P LINE L1 -1827 4319 4218 1967 150 0 3 chrX_random 5140870 5141176 -4157830 + AluSx SINE Alu 1 305 -7 9007 185 5 9 chrX_random 5141176 5142796 -4156210 - L1P LINE L1 -1928 4218 2605 2457 131 18 0 chrX_random 5142797 5143186 -4155820 + L1PA13 LINE L1 5760 6155 -8 299 185 0 0 chrX_random 5143336 5143401 -4155605 + MER63 DNA MER1_type 950 1014 -48 1902 103 29 42 chrX_random 5143479 5143790 -4155216 + AluSq SINE Alu 1 307 -6 4559 142 6 4 chrX_random 5143939 5144649 -4154357 + MER50 LTR ERV1 1 711 -23 206 245 20 0 chrX_random 5145322 5145371 -4153635 + MIR SINE MIR 213 262 0 904 99 33 0 chrX_random 5146012 5146133 -4152873 - AluJb SINE Alu -187 125 1 376 302 0 0 chrX_random 5146314 5146410 -4152596 - MIR3 SINE MIR -21 187 92 5806 60 34 3 chrX_random 5146628 5147384 -4151622 + LTR17 LTR ERV1 1 780 0 965 197 0 43 chrX_random 5147490 5147698 -4151308 - MER3 DNA MER1_type -6 203 5 1155 153 34 0 chrX_random 5148569 5148746 -4150260 - Tigger3(Golem) DNA MER2_type -1 3028 2846 812 168 110 7 chrX_random 5148743 5148898 -4150108 - Tigger3(Golem) DNA MER2_type -2856 173 3 * 2663 148 98 27 chrX_random 5149389 5149902 -4149104 - MER44D DNA MER2_type -1 604 1 1177 215 78 73 chrX_random 5151059 5151597 -4147409 + MER39 LTR ERV1 6 707 0 217 370 31 24 chrX_random 5151719 5151846 -4147160 + L3 LINE CR1 1448 1575 -2 1622 164 38 57 chrX_random 5152572 5153057 -4145949 - MSTD LTR MaLR 0 428 1 263 310 46 11 chrX_random 5153095 5153182 -4145824 - MIR SINE MIR -153 109 20 12036 23 0 1 chrX_random 5153545 5154979 -4144027 - L1P LINE L1 -1918 4228 2796 8244 159 18 15 chrX_random 5154975 5156962 -4142044 + L1MA2 LINE L1 3799 5783 -522 * 857 126 17 31 chrX_random 5156963 5157146 -4141860 + L1MA2 LINE L1 5955 6127 -170 252 212 50 61 chrX_random 5157449 5157548 -4141458 + L1MC/D LINE L1 5702 5799 -2009 23 68 0 0 chrX_random 5158903 5158947 -4140059 + AT_rich Low_complexity Low_complexity 1 44 0 262 335 71 14 chrX_random 5160328 5160540 -4138466 + L1MEd LINE L1 412 635 -5895 2692 273 126 17 chrX_random 5161211 5162294 -4136712 - L1MD2 LINE L1 -10 6349 5132 266 351 49 17 chrX_random 5162364 5162556 -4136450 + MER20B DNA MER1_type 2 201 -18 31 0 0 0 chrX_random 5162718 5162749 -4136257 + AT_rich Low_complexity Low_complexity 1 31 0 2789 165 30 30 chrX_random 5163055 5163620 -4135386 + MER34B LTR ERV1 1 565 0 471 282 57 13 chrX_random 5163622 5163882 -4135124 + L1MEd LINE L1 2478 2746 -3794 977 229 47 0 chrX_random 5163892 5164106 -4134900 + MER58A DNA MER1_type 1 224 0 974 283 18 36 chrX_random 5164798 5165127 -4133879 + Charlie2 DNA MER1_type 1 323 -2459 1466 244 66 9 chrX_random 5165136 5165578 -4133428 + Charlie2 DNA MER1_type 1861 2327 -535 317 175 63 0 chrX_random 5166222 5166285 -4132721 + Charlie5 DNA MER1_type 1 67 -2545 525 143 42 0 chrX_random 5166288 5166407 -4132599 + Charlie5 DNA MER1_type 2471 2594 -18 255 125 0 0 chrX_random 5167505 5167545 -4131461 - L3b LINE CR1 -185 1398 1359 26 30 0 0 chrX_random 5167591 5167624 -4131382 + AT_rich Low_complexity Low_complexity 1 33 0 510 261 116 56 chrX_random 5168086 5168370 -4130636 + MLT1L LTR MaLR 94 394 -221 552 259 88 0 chrX_random 5168574 5168721 -4130285 + MLT1L LTR MaLR 448 607 -8 198 118 0 0 chrX_random 5168937 5168971 -4130035 + (TC)n Simple_repeat Simple_repeat 1 34 0 237 350 60 92 chrX_random 5169463 5169626 -4129380 - L2 LINE L2 -4 3268 3116 769 156 0 15 chrX_random 5169626 5169761 -4129245 + FLAM_C SINE Alu 1 133 0 237 350 60 92 chrX_random 5169761 5169880 -4129126 - L2 LINE L2 -156 3116 2995 408 387 64 5 chrX_random 5170652 5170856 -4128150 + MIR SINE MIR 46 261 -1 486 341 64 75 chrX_random 5170875 5171248 -4127758 - L2 LINE L2 -202 3070 2681 2616 93 5 14 chrX_random 5171248 5171615 -4127391 - THE1B LTR MaLR 0 364 1 486 341 64 75 chrX_random 5171615 5171964 -4127042 - L2 LINE L2 -591 2681 2330 1723 195 36 13 chrX_random 5172027 5172417 -4126589 + LTR52 LTR ERVL 5 403 -18 277 254 14 0 chrX_random 5173422 5173493 -4125513 + MER117 DNA MER1_type 17 88 -109 450 319 12 43 chrX_random 5173869 5174032 -4124974 + MIR SINE MIR 16 173 -89 258 105 0 0 chrX_random 5174038 5174076 -4124930 + (TG)n Simple_repeat Simple_repeat 2 39 0 407 310 0 58 chrX_random 5174134 5174289 -4124717 - MIR SINE MIR -86 176 31 2217 130 21 16 chrX_random 5175023 5175400 -4123606 - L1MC1 LINE L1 0 6333 5955 1001 110 110 20 chrX_random 5175670 5175870 -4123136 - THE1C LTR MaLR -2 373 156 1051 94 0 0 chrX_random 5175871 5175998 -4123008 + AluSq/x SINE Alu 1 127 -186 27 0 0 0 chrX_random 5176583 5176610 -4122396 + AT_rich Low_complexity Low_complexity 1 27 0 1250 136 196 57 chrX_random 5176763 5177028 -4121978 + AluJo SINE Alu 1 302 0 3792 204 54 7 chrX_random 5178031 5178804 -4120202 - MER21B LTR ERV1 -53 810 1 334 354 139 5 chrX_random 5178840 5179049 -4119957 - MIR SINE MIR -14 248 12 27 49 0 0 chrX_random 5179705 5179746 -4119260 + AT_rich Low_complexity Low_complexity 1 41 0 472 251 76 15 chrX_random 5179817 5180051 -4118955 + MLT1J1 LTR MaLR 72 325 -125 229 267 116 23 chrX_random 5180086 5180172 -4118834 + L2 LINE L2 3207 3300 -13 258 355 28 21 chrX_random 5180228 5180369 -4118637 + L3 LINE CR1 1424 1565 -12 1085 189 60 52 chrX_random 5182010 5182359 -4116647 - L1MEc LINE L1 -3561 2654 2303 1158 190 0 5 chrX_random 5182684 5182884 -4116122 - AluJo SINE Alu -29 283 85 755 174 25 0 chrX_random 5182894 5183055 -4115951 - L1MEc LINE L1 -4050 2346 2182 554 269 159 0 chrX_random 5183203 5183348 -4115658 - MER5A DNA MER1_type 0 189 22 1347 12 0 19 chrX_random 5184425 5184587 -4114419 - L1PA2 LINE L1 0 6155 5997 656 25 0 0 chrX_random 5184587 5184668 -4114338 + L1HS LINE L1 5895 5975 -180 280 269 26 13 chrX_random 5184671 5184749 -4114257 + L2 LINE L2 3235 3313 0 2395 90 0 3 chrX_random 5185016 5185327 -4113679 + AluSq SINE Alu 1 310 -3 1293 299 47 2 chrX_random 5185428 5185853 -4113153 + LTR16A LTR ERVL 1 444 -6 208 370 76 16 chrX_random 5187160 5187344 -4111662 - MIR3 SINE MIR -9 199 5 * 221 229 35 0 chrX_random 5187308 5187366 -4111640 + MIR SINE MIR 100 158 -50 183 156 0 0 chrX_random 5187655 5187687 -4111319 + (ATG)n Simple_repeat Simple_repeat 2 33 0 884 182 0 0 chrX_random 5187846 5188027 -4110979 - MER53 DNA DNA 0 189 9 1464 194 126 3 chrX_random 5188048 5188373 -4110633 - MLT1A1 LTR MaLR 0 365 1 367 302 122 6 chrX_random 5188484 5188656 -4110350 - LTR16C LTR ERVL 0 491 300 705 241 22 102 chrX_random 5188756 5189273 -4109733 + MER34B LTR ERV1 1 445 -97 2476 273 50 32 chrX_random 5189706 5190491 -4108515 + L1PA13 LINE L1 4 802 -5985 14906 227 19 21 chrX_random 5190627 5195449 -4103557 + L1PA13 LINE L1 1245 6076 -740 5798 204 25 26 chrX_random 5195557 5196844 -4102162 - L1M1 LINE L1 -6265 1300 15 241 316 69 6 chrX_random 5196922 5197096 -4101910 - L1ME LINE L1 -349 5772 5588 1049 223 48 3 chrX_random 5197825 5198117 -4100889 + L1 LINE L1 4261 4565 -1581 1525 201 54 28 chrX_random 5198119 5198412 -4100594 - MLT1A1 LTR MaLR -2 363 79 2152 135 48 25 chrX_random 5198412 5198768 -4100238 - THE1B LTR MaLR 0 364 1 12000 87 6 0 chrX_random 5198768 5200338 -4098668 - THE1B-int LTR MaLR 0 1580 1 2181 126 48 25 chrX_random 5200338 5200694 -4098312 - THE1B LTR MaLR 0 364 1 1525 201 54 28 chrX_random 5200694 5200752 -4098254 - MLT1A1 LTR MaLR -285 80 1 3615 197 24 0 chrX_random 5200753 5201559 -4097447 + L1 LINE L1 4562 5386 -760 4532 154 25 18 chrX_random 5201563 5202447 -4096559 + L1MB1 LINE L1 5279 6168 0 1186 267 31 86 chrX_random 5202690 5203180 -4095826 - L2 LINE L2 0 3313 2851 319 98 0 0 chrX_random 5203749 5203800 -4095206 + L1MA4 LINE L1 6234 6284 -16 28 0 0 0 chrX_random 5203804 5203832 -4095174 + AT_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chrX_random 5204282 5204303 -4094703 + AT_rich Low_complexity Low_complexity 1 21 0 33 56 0 0 chrX_random 5204573 5204627 -4094379 + AT_rich Low_complexity Low_complexity 1 54 0 2216 121 57 10 chrX_random 5204631 5205019 -4093987 - L1MA1 LINE L1 -7 6295 5890 2703 150 19 0 chrX_random 5205331 5205751 -4093255 - MSTA LTR MaLR 0 428 1 256 338 13 0 chrX_random 5206106 5206183 -4092823 - LTR67 LTR ERVL -357 200 123 401 230 177 0 chrX_random 5207195 5207308 -4091698 + MIR SINE MIR 104 236 -26 26 0 0 0 chrX_random 5207320 5207346 -4091660 + AT_rich Low_complexity Low_complexity 1 26 0 480 295 154 0 chrX_random 5207438 5207587 -4091419 + MER5A DNA MER1_type 10 181 -8 658 280 89 25 chrX_random 5207599 5207835 -4091171 + MIR SINE MIR 8 258 -4 414 308 0 8 chrX_random 5208352 5208485 -4090521 + MIR SINE MIR 120 251 -11 6688 67 3 2 chrX_random 5208493 5209932 -4089074 + L1PA8A LINE L1 4694 6129 -2 189 74 0 0 chrX_random 5209955 5209982 -4089024 + (TTG)n Simple_repeat Simple_repeat 2 28 0 418 276 20 13 chrX_random 5210697 5210849 -4088157 - L1ME LINE L1 -452 5669 5517 305 332 60 35 chrX_random 5211074 5211306 -4087700 - L1ME LINE L1 -871 5275 5038 600 287 118 29 chrX_random 5212363 5212711 -4086295 + MLT1H LTR MaLR 119 497 -52 6987 59 3 1 chrX_random 5212733 5214472 -4084534 - L1PA7 LINE L1 -3 6151 4410 7490 106 1 14 chrX_random 5214472 5215651 -4083355 + L1PA7 LINE L1 3232 4395 -1751 6553 233 97 24 chrX_random 5215651 5217780 -4081226 - L1M2 LINE L1 -4909 2300 1 1620 149 86 31 chrX_random 5218210 5218560 -4080446 - THE1C LTR MaLR -4 371 3 4480 134 15 12 chrX_random 5218562 5219280 -4079726 - THE1C-int LTR MaLR 0 1580 861 337 128 0 0 chrX_random 5219278 5219325 -4079681 - THE1C-int LTR MaLR -938 642 596 * 232 128 0 26 chrX_random 5219374 5219413 -4079593 - MSTA LTR MaLR -363 65 28 369 113 0 0 chrX_random 5219415 5219468 -4079538 - THE1C-int LTR MaLR -1016 564 512 3313 263 23 25 chrX_random 5219569 5219913 -4079093 - L2 LINE L2 -490 2824 2481 772 269 14 28 chrX_random 5219913 5220125 -4078881 + MER63A DNA MER1_type 1 209 -1 3313 263 23 25 chrX_random 5220125 5220679 -4078327 - L2 LINE L2 -833 2481 1927 1534 252 91 40 chrX_random 5222463 5222959 -4076047 + MLT1G1 LTR MaLR 75 595 0 773 200 47 35 chrX_random 5223874 5224044 -4074962 + MER5A DNA MER1_type 11 182 -7 1682 216 83 7 chrX_random 5224526 5224934 -4074072 - L1ME1 LINE L1 -5 6161 5723 6608 141 23 19 chrX_random 5224948 5225890 -4073116 - L1MA2 LINE L1 0 6304 5367 1937 127 4 0 chrX_random 5225890 5226157 -4072849 - AluSx SINE Alu -44 268 1 6608 141 23 19 chrX_random 5226157 5227295 -4071711 - L1MA2 LINE L1 -937 5367 4204 1175 240 20 47 chrX_random 5228214 5228510 -4070496 - LTR16C LTR ERVL -4 487 200 234 0 0 0 chrX_random 5229552 5229578 -4069428 + (T)n Simple_repeat Simple_repeat 1 26 0 980 218 11 54 chrX_random 5229887 5230167 -4068839 + MER96B DNA MER1_type? 5 272 -145 391 294 121 4 chrX_random 5230543 5230815 -4068191 - L1ME4a LINE L1 0 6121 5818 2631 52 0 0 chrX_random 5230954 5231259 -4067747 - AluY SINE Alu -6 305 1 938 260 23 23 chrX_random 5231333 5231598 -4067408 + LTR16A1 LTR ERVL 147 411 -46 5030 139 34 16 chrX_random 5231703 5232583 -4066423 - L1MA8 LINE L1 -4 6287 5392 23 33 0 0 chrX_random 5232821 5232851 -4066155 + AT_rich Low_complexity Low_complexity 1 30 0 414 0 0 0 chrX_random 5233239 5233285 -4065721 + (CA)n Simple_repeat Simple_repeat 1 46 0 * 441 0 0 0 chrX_random 5233284 5233333 -4065673 + (GA)n Simple_repeat Simple_repeat 2 50 0 4412 275 115 24 chrX_random 5234068 5234948 -4064058 + L2 LINE L2 1106 1904 -1409 338 0 24 0 chrX_random 5234948 5234990 -4064016 + (TTG)n Simple_repeat Simple_repeat 2 44 0 4412 275 115 24 chrX_random 5234990 5235972 -4063034 + L2 LINE L2 1904 3155 -158 412 111 25 12 chrX_random 5236186 5236267 -4062739 + (TCTA)n Simple_repeat Simple_repeat 1 82 0 1950 200 45 24 chrX_random 5236492 5236917 -4062089 - Tigger2a DNA MER2_type 0 434 1 19509 102 6 2 chrX_random 5237037 5240653 -4058353 - L1PA8 LINE L1 -1 6486 2819 2285 162 41 6 chrX_random 5241056 5241420 -4057586 + L1P3 LINE L1 10 386 -6075 938 173 0 28 chrX_random 5241419 5241633 -4057373 - L1PA8 LINE L1 -5055 1406 1199 * 263 247 39 26 chrX_random 5241874 5241951 -4057055 - MIR SINE MIR -120 142 65 294 313 36 10 chrX_random 5242230 5242422 -4056584 - L1M4 LINE L1 -1543 5624 5428 10789 186 7 9 chrX_random 5242467 5244626 -4054380 + L1PA13 LINE L1 3075 5229 -917 3665 135 25 0 chrX_random 5244658 5245250 -4053756 + L1PA13 LINE L1 5544 6150 -13 195 48 48 24 chrX_random 5245255 5245297 -4053709 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 431 321 19 44 chrX_random 5245310 5245581 -4053425 - L1M4 LINE L1 -1814 5353 5090 3485 170 16 8 chrX_random 5246225 5246891 -4052115 + L1MA8 LINE L1 4591 5262 -884 296 177 25 63 chrX_random 5246869 5246948 -4052058 + L1MD2 LINE L1 6235 6310 -49 * 2996 147 11 41 chrX_random 5246965 5247049 -4051957 + L1MA8 LINE L1 5254 5339 -952 2533 69 0 0 chrX_random 5247049 5247355 -4051651 + AluSc SINE Alu 1 306 -3 2996 147 11 41 chrX_random 5247355 5247835 -4051171 + L1MA8 LINE L1 5339 5801 -490 393 188 17 34 chrX_random 5247858 5247975 -4051031 + L1MA8 LINE L1 6068 6182 -109 645 229 36 14 chrX_random 5248199 5248422 -4050584 - L1M4 LINE L1 -2099 5068 4841 2552 167 16 26 chrX_random 5249062 5249570 -4049436 - L1MC/D LINE L1 -603 5756 5254 927 201 9 5 chrX_random 5249572 5249786 -4049220 - L1MC/D LINE L1 -1315 4831 4617 28 0 0 0 chrX_random 5249804 5249832 -4049174 + AT_rich Low_complexity Low_complexity 1 28 0 1182 230 11 69 chrX_random 5249835 5250270 -4048736 - L1MA9 LINE L1 -38 6274 5865 3045 193 27 5 chrX_random 5250370 5251379 -4047627 - L1MA9 LINE L1 -484 5828 4800 2184 238 32 8 chrX_random 5251370 5252090 -4046916 - L1M4 LINE L1 -2342 4825 4089 * 1419 225 99 26 chrX_random 5252088 5252814 -4046192 - L1M4 LINE L1 -3471 3696 2897 * 871 193 0 48 chrX_random 5252842 5253008 -4045998 - FRAM SINE Alu -17 159 2 4761 235 36 17 chrX_random 5253053 5254943 -4044063 - L1M4 LINE L1 -4161 3007 1212 * 5288 142 9 36 chrX_random 5254942 5255521 -4043485 + L1PA16 LINE L1 5162 5706 -460 2266 112 0 6 chrX_random 5255521 5255833 -4043173 + AluSx SINE Alu 3 312 0 5288 142 9 36 chrX_random 5255833 5256282 -4042724 + L1PA16 LINE L1 5706 6165 -1 3534 299 36 18 chrX_random 5256319 5257518 -4041488 - L1M4 LINE L1 -5944 1224 4 605 291 86 53 chrX_random 5257534 5258551 -4040455 - L1MDa LINE L1 -3018 3522 2472 255 205 134 39 chrX_random 5258613 5258740 -4040266 - L1MB1 LINE L1 0 6168 6030 5313 97 51 0 chrX_random 5258788 5259672 -4039334 + L1PB1 LINE L1 5187 6115 -36 275 246 43 0 chrX_random 5259812 5259881 -4039125 + LTR16A1 LTR ERVL 370 441 -16 1027 191 28 83 chrX_random 5259893 5260227 -4038779 - MER33 DNA MER1_type -13 311 1 302 340 21 0 chrX_random 5260246 5260343 -4038663 - L1MB1 LINE L1 -2028 5780 5682 396 0 0 0 chrX_random 5261349 5261393 -4037613 + (CA)n Simple_repeat Simple_repeat 2 45 0 225 65 0 0 chrX_random 5261539 5261570 -4037436 + (TG)n Simple_repeat Simple_repeat 1 31 0 26 0 0 0 chrX_random 5262093 5262119 -4036887 + AT_rich Low_complexity Low_complexity 1 26 0 1290 290 61 48 chrX_random 5262465 5262908 -4036098 - MLT1G LTR MaLR -163 427 1 1489 327 38 41 chrX_random 5263022 5263939 -4035067 - L2 LINE L2 -189 3083 2183 249 323 0 0 chrX_random 5264145 5264210 -4034796 - MIR3 SINE MIR -132 76 12 1585 178 27 11 chrX_random 5265089 5265421 -4033585 - MER4A LTR ERV1 0 664 269 468 156 89 0 chrX_random 5265430 5265520 -4033486 - MER4A LTR ERV1 -566 98 1 15195 110 53 23 chrX_random 5265527 5268127 -4030879 - MER4A-int LTR ERV1 -2 6596 3918 2419 93 103 19 chrX_random 5268104 5268254 -4030752 - MER4A-int LTR ERV1 -3337 3261 3125 * 294 29 0 0 chrX_random 5268254 5268289 -4030717 + (CA)n Simple_repeat Simple_repeat 1 35 0 2419 93 103 19 chrX_random 5268289 5268622 -4030384 - MER4A-int LTR ERV1 -3473 3125 2737 1374 149 66 8 chrX_random 5268622 5268864 -4030142 + LTR8 LTR ERV1 1 256 -435 4180 87 51 32 chrX_random 5268865 5269577 -4029429 - MER4A-int LTR ERV1 -4103 2495 1771 1055 63 11 252 chrX_random 5269575 5269952 -4029054 - MER4A-int LTR ERV1 -4266 1271 510 * 2411 119 90 39 chrX_random 5269938 5270463 -4028543 - MER4A-int LTR ERV1 -5997 601 1 1734 117 36 77 chrX_random 5270466 5270826 -4028180 - MER4A LTR ERV1 0 664 261 493 133 89 0 chrX_random 5270826 5270916 -4028090 - MER4A LTR ERV1 -566 98 1 351 203 63 0 chrX_random 5270922 5271001 -4028005 - MER94 DNA DNA -31 103 20 1553 282 52 2 chrX_random 5271444 5271905 -4027101 - LTR16C LTR ERVL -7 484 1 234 373 73 9 chrX_random 5272246 5272356 -4026650 - L3 LINE CR1 -6 1571 1455 23 33 0 0 chrX_random 5272613 5272643 -4026363 + AT_rich Low_complexity Low_complexity 1 30 0 1669 121 26 36 chrX_random 5272894 5273136 -4025870 - L1MB3 LINE L1 -3 6180 5937 2592 115 5 0 chrX_random 5273136 5273509 -4025497 + THE1C LTR MaLR 1 375 0 10725 108 33 4 chrX_random 5273509 5275044 -4023962 + THE1C-int LTR MaLR 1 1580 0 2509 114 19 0 chrX_random 5275044 5275412 -4023594 + THE1C LTR MaLR 1 375 0 1669 121 26 36 chrX_random 5275412 5275472 -4023534 - L1MB3 LINE L1 -243 5940 5879 870 281 124 21 chrX_random 5275864 5276299 -4022707 + MLT1L LTR MaLR 132 611 -4 376 264 112 16 chrX_random 5276340 5276465 -4022541 - LTR16A LTR ERVL 0 450 314 236 352 33 0 chrX_random 5276505 5276596 -4022410 - LTR16A LTR ERVL -216 234 141 274 339 65 16 chrX_random 5277648 5277772 -4021234 + L2 LINE L2 3182 3311 -2 308 184 39 68 chrX_random 5278039 5278142 -4020864 - MER34 LTR ERV1 -5 537 438 4057 163 3 29 chrX_random 5278148 5278713 -4020293 - L1PA15 LINE L1 -5 6160 5582 240 35 0 0 chrX_random 5278713 5278742 -4020264 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2025 112 3 14 chrX_random 5278745 5279030 -4019976 - AluSx SINE Alu -30 282 1 4057 163 3 29 chrX_random 5279030 5279223 -4019783 - L1PA15 LINE L1 -585 5580 5418 275 253 42 11 chrX_random 5279419 5279514 -4019492 - L1 LINE L1 -2179 3967 3870 3092 179 6 2 chrX_random 5279598 5279632 -4019374 - L1MB1 LINE L1 -134 6034 6001 2563 231 29 57 chrX_random 5279632 5280895 -4018111 - L1MD3 LINE L1 -743 5386 4777 * 3331 255 76 34 chrX_random 5280884 5280895 -4018111 - L1MD3 LINE L1 -3854 2275 2266 8343 91 2 0 chrX_random 5280895 5282832 -4016174 - L1PA7 LINE L1 0 6154 4209 3331 255 76 34 chrX_random 5282832 5285182 -4013824 - L1MD3 LINE L1 -3863 2266 160 282 307 55 0 chrX_random 5285323 5285486 -4013520 - L1MD3 LINE L1 -5941 178 7 1991 178 3 3 chrX_random 5285812 5286155 -4012851 + MLT2C1 LTR ERVL 1 343 -54 210 372 56 20 chrX_random 5286219 5286415 -4012591 + L2 LINE L2 559 761 -2553 347 345 76 50 chrX_random 5287697 5288054 -4010952 + L2 LINE L2 2431 2796 -518 341 228 13 13 chrX_random 5289062 5289141 -4009865 + MIR SINE MIR 184 262 0 563 332 47 30 chrX_random 5289165 5289400 -4009606 + MIR SINE MIR 24 262 0 1937 179 20 20 chrX_random 5289624 5290014 -4008992 - L1MB8 LINE L1 -6 6172 5783 1600 199 50 0 chrX_random 5290114 5290436 -4008570 + MER58B DNA MER1_type 4 341 0 1482 255 30 52 chrX_random 5290693 5291195 -4007811 - LTR16C LTR ERVL 0 491 1 588 285 157 4 chrX_random 5291227 5291476 -4007530 - L2 LINE L2 -12 3301 3015 356 189 0 11 chrX_random 5293480 5293570 -4005436 + (GAATG)n Simple_repeat Simple_repeat 3 91 0 417 184 0 0 chrX_random 5294648 5294757 -4004249 + (TA)n Simple_repeat Simple_repeat 1 109 0 183 147 0 0 chrX_random 5295634 5295645 -4003361 + (CATATA)n Simple_repeat Simple_repeat 1 11 -23 1664 161 40 50 chrX_random 5295645 5296024 -4002982 - THE1C LTR MaLR 0 375 1 183 147 0 0 chrX_random 5296024 5296046 -4002960 + (CATATA)n Simple_repeat Simple_repeat 10 34 0 756 229 37 60 chrX_random 5296212 5296430 -4002576 - MER58C DNA MER1_type -2 213 1 263 229 36 46 chrX_random 5296472 5296564 -4002442 - MLT1H LTR MaLR -10 585 454 1562 119 0 0 chrX_random 5296650 5296885 -4002121 - L1MA6 LINE L1 0 6300 6066 232 206 27 68 chrX_random 5297063 5297136 -4001870 - MIR SINE MIR -11 251 182 1742 246 32 35 chrX_random 5297632 5298234 -4000772 - L1ME3 LINE L1 -8 6162 5590 426 39 0 0 chrX_random 5298342 5298394 -4000612 + (CA)n Simple_repeat Simple_repeat 1 52 0 16906 151 49 27 chrX_random 5298396 5298562 -4000444 + L1M1 LINE L1 614 775 -6790 2253 96 53 31 chrX_random 5298562 5298918 -4000088 - THE1B LTR MaLR 0 364 1 16906 151 49 27 chrX_random 5298918 5299888 -3999118 + L1M1 LINE L1 775 1723 -5842 204 40 0 0 chrX_random 5299888 5299913 -3999093 + (GA)n Simple_repeat Simple_repeat 2 26 0 16906 151 49 27 chrX_random 5299913 5302434 -3996572 + L1M1 LINE L1 1723 4351 -3214 22979 47 0 5 chrX_random 5302444 5305298 -3993708 + L1PA4 LINE L1 1 2840 -3306 567 27 0 0 chrX_random 5305298 5305372 -3993634 + AluY SINE Alu 234 307 -4 20905 33 6 12 chrX_random 5305392 5308729 -3990277 + L1PA4 LINE L1 2827 6152 -3 520 218 0 8 chrX_random 5308735 5308859 -3990147 + L1M1 LINE L1 4339 4461 -3104 1166 184 34 0 chrX_random 5308870 5309109 -3989897 + L1M1 LINE L1 4781 5027 -2538 3526 133 72 9 chrX_random 5709112 5709749 -3589257 + Tigger3(Golem) DNA MER2_type 2351 3027 -2 552 144 21 0 chrX_random 5709927 5710024 -3588982 + L1MA10 LINE L1 6236 6334 0 1011 278 79 18 chrX_random 5710396 5710838 -3588168 - L1MC/D LINE L1 -2082 5726 5258 1068 225 14 0 chrX_random 5710986 5711204 -3587802 - AluJo SINE Alu -89 223 3 292 296 23 0 chrX_random 5711239 5711327 -3587679 - LTR16A LTR ERVL -5 445 356 22 0 0 0 chrX_random 5711498 5711520 -3587486 + AT_rich Low_complexity Low_complexity 1 22 0 954 202 75 33 chrX_random 5711938 5712300 -3586706 - L1MC5 LINE L1 -90 7871 7495 1688 189 0 6 chrX_random 5712306 5712624 -3586382 - L1 LINE L1 -3304 2842 2527 236 292 56 49 chrX_random 5712628 5712772 -3586234 - L1MC/D LINE L1 -1328 4818 4674 11037 192 123 12 chrX_random 5712824 5715728 -3583278 - L1PBa LINE L1 -3626 3236 6 234 377 40 35 chrX_random 5717121 5717320 -3581686 + L2 LINE L2 154 353 -2961 461 216 0 0 chrX_random 5717627 5717701 -3581305 - MER63 DNA MER1_type -2 1058 985 337 207 46 35 chrX_random 5717707 5717794 -3581212 - MER63 DNA MER1_type -348 714 1 782 104 26 9 chrX_random 5718223 5718338 -3580668 - MSTB1 LTR MaLR 0 432 316 214 44 111 0 chrX_random 5718704 5718749 -3580257 + A-rich Low_complexity Low_complexity 2 51 0 614 322 57 27 chrX_random 5719038 5719469 -3579537 + LTR33 LTR ERVL 25 513 -8 646 297 58 47 chrX_random 5719985 5720349 -3578657 + L1ME3A LINE L1 5517 5884 -286 318 326 0 0 chrX_random 5721986 5722078 -3576928 - L3 LINE CR1 -1 1576 1485 2143 95 21 7 chrX_random 5723290 5723573 -3575433 - AluSx SINE Alu -25 287 1 1332 108 0 0 chrX_random 5724124 5724327 -3574679 + L1MA4 LINE L1 6097 6299 -1 1857 156 0 3 chrX_random 5724754 5725081 -3573925 + AluSx SINE Alu 1 326 0 27 0 0 0 chrX_random 5726384 5726411 -3572595 + AT_rich Low_complexity Low_complexity 1 27 0 424 284 58 48 chrX_random 5727365 5727573 -3571433 - MIR SINE MIR -7 255 46 329 293 173 27 chrX_random 5727845 5727995 -3571011 - MIR3 SINE MIR -17 191 20 291 68 68 68 chrX_random 5728585 5728644 -3570362 + L1MA5 LINE L1 6220 6278 -22 296 266 102 37 chrX_random 5728727 5728927 -3570079 - MER20B DNA MER1_type 0 219 2 768 351 13 53 chrX_random 5728987 5729496 -3569510 - L2 LINE L2 -5 3267 2791 943 291 45 73 chrX_random 5730493 5730998 -3568008 + LTR16C LTR ERVL 1 491 0 356 360 70 0 chrX_random 5731527 5731641 -3567365 + L2 LINE L2 3150 3271 -1 2324 103 0 3 chrX_random 5733573 5733883 -3565123 + AluSg SINE Alu 1 309 -1 203 314 145 6 chrX_random 5734132 5734291 -3564715 + MIR3 SINE MIR 27 207 -1 1410 266 62 21 chrX_random 5734341 5734774 -3564232 - LTR16A1 LTR ERVL 0 457 7 228 35 0 0 chrX_random 5735252 5735281 -3563725 + (A)n Simple_repeat Simple_repeat 1 29 0 2264 179 44 2 chrX_random 5735419 5735828 -3563178 - MSTB LTR MaLR 0 426 1 1992 113 3 0 chrX_random 5736604 5736929 -3562077 - AluSx SINE Alu 0 326 1 211 294 43 54 chrX_random 5737979 5738071 -3560935 - L2 LINE L2 -42 3271 3181 * 547 340 166 45 chrX_random 5738063 5739185 -3559821 - L2 LINE L2 -1743 1571 314 204 67 0 0 chrX_random 5739207 5739237 -3559769 + (TG)n Simple_repeat Simple_repeat 1 30 0 286 230 100 20 chrX_random 5739887 5739987 -3559019 + MIR SINE MIR 105 212 -50 273 119 0 0 chrX_random 5740839 5740881 -3558125 + (TATATG)n Simple_repeat Simple_repeat 3 44 0 769 240 23 0 chrX_random 5741001 5741172 -3557834 + MER58B DNA MER1_type 167 341 0 645 347 15 15 chrX_random 5741462 5741724 -3557282 - MIR SINE MIR 0 262 1 205 333 96 34 chrX_random 5741724 5741877 -3557129 + L2 LINE L2 3065 3228 -44 25 51 0 0 chrX_random 5743533 5743572 -3555434 + AT_rich Low_complexity Low_complexity 1 39 0 360 320 118 6 chrX_random 5744023 5744201 -3554805 + MIR SINE MIR 2 199 -63 525 32 0 0 chrX_random 5744305 5744368 -3554638 + (CA)n Simple_repeat Simple_repeat 1 63 0 2141 208 38 16 chrX_random 5744409 5744861 -3554145 + MLT1C LTR MaLR 6 467 0 4791 126 9 26 chrX_random 5745159 5745705 -3553301 + Tigger2 DNA MER2_type 1 530 -2188 2304 72 21 0 chrX_random 5745705 5745995 -3553011 + AluY SINE Alu 1 296 -15 4791 126 9 26 chrX_random 5745995 5746240 -3552766 + Tigger2 DNA MER2_type 530 778 -1940 1427 133 44 8 chrX_random 5746271 5746520 -3552486 + Tigger2 DNA MER2_type 2451 2708 -10 1849 181 103 6 chrX_random 5746768 5747401 -3551605 - L1M4 LINE L1 -599 5575 4883 250 196 22 0 chrX_random 5747821 5747867 -3551139 + L1M4 LINE L1 3494 3540 -2606 * 1372 252 28 48 chrX_random 5747866 5748366 -3550640 + L1ME LINE L1 157 646 -5424 416 238 119 0 chrX_random 5748392 5748577 -3550429 + L1ME LINE L1 764 970 -5100 3522 223 42 50 chrX_random 5748714 5749913 -3549093 - L1M4 LINE L1 -1444 4702 3513 336 135 0 0 chrX_random 5749912 5749964 -3549042 + L1 LINE L1 5136 5187 -959 * 225 281 16 0 chrX_random 5750246 5750310 -3548696 + (TATATG)n Simple_repeat Simple_repeat 4 68 0 2439 113 25 0 chrX_random 5750421 5750776 -3548230 + THE1B LTR MaLR 1 364 0 21 57 0 0 chrX_random 5751135 5751170 -3547836 + AT_rich Low_complexity Low_complexity 1 35 0 416 324 7 21 chrX_random 5752505 5752647 -3546359 + MIR SINE MIR 41 180 -82 281 291 0 0 chrX_random 5752854 5752933 -3546073 - HsTC2 DNA Tc2 -1812 86 8 506 268 29 14 chrX_random 5752938 5753076 -3545930 - MIR SINE MIR -1 261 122 2177 61 0 24 chrX_random 5753394 5753690 -3545316 + L1PA7 LINE L1 5852 6140 -14 1312 185 39 1 chrX_random 5753777 5754033 -3544973 - L1MC3 LINE L1 -326 5825 5725 293 271 209 16 chrX_random 5754230 5754359 -3544647 - MER5A DNA MER1_type -3 186 33 22 35 0 0 chrX_random 5754610 5754639 -3544367 + AT_rich Low_complexity Low_complexity 1 29 0 5740 27 0 0 chrX_random 5754756 5755428 -3543578 + L1PA4 LINE L1 5481 6152 -3 1177 179 5 0 chrX_random 5755554 5755772 -3543234 + L1 LINE L1 3509 3727 -2419 552 14 0 0 chrX_random 5755783 5755852 -3543154 + L1PA4 LINE L1 6087 6155 0 2436 121 83 40 chrX_random 5756933 5757388 -3541618 + L1PA16 LINE L1 5685 6159 -7 21 82 0 0 chrX_random 5758869 5758918 -3540088 + AT_rich Low_complexity Low_complexity 1 49 0 384 77 0 0 chrX_random 5758970 5759022 -3539984 + (CA)n Simple_repeat Simple_repeat 2 53 0 383 242 42 33 chrX_random 5759540 5759660 -3539346 - L2 LINE L2 -4 3309 3189 23 33 0 0 chrX_random 5760625 5760655 -3538351 + AT_rich Low_complexity Low_complexity 1 30 0 224 239 0 0 chrX_random 5761373 5761419 -3537587 + L2 LINE L2 3264 3309 -4 3955 197 52 13 chrX_random 5761864 5762854 -3536152 - L1MB2 LINE L1 -7 6164 5106 1749 174 7 7 chrX_random 5762854 5763153 -3535853 - AluJo SINE Alu -13 299 1 3955 197 52 13 chrX_random 5763153 5763530 -3535476 - L1MB2 LINE L1 -1065 5106 4745 26 50 0 0 chrX_random 5764162 5764202 -3534804 + AT_rich Low_complexity Low_complexity 1 40 0 1711 113 0 0 chrX_random 5764262 5764493 -3534513 + AluSg/x SINE Alu 76 306 -6 4489 194 42 33 chrX_random 5764620 5766526 -3532480 + L1MD1 LINE L1 1514 3434 -3106 681 155 4 216 chrX_random 5766522 5766598 -3532408 + L1MD1 LINE L1 5907 5997 -639 * 291 56 0 0 chrX_random 5766598 5766634 -3532372 - U2 snRNA snRNA -152 36 1 681 155 4 216 chrX_random 5766634 5766754 -3532252 + L1MD1 LINE L1 5997 6089 -547 2875 140 18 10 chrX_random 5766754 5767235 -3531771 + L1MA8 LINE L1 5783 6280 -11 2322 184 36 57 chrX_random 5767287 5767862 -3531144 + L1MD1 LINE L1 6072 6634 -2 23 33 0 0 chrX_random 5768071 5768101 -3530905 + AT_rich Low_complexity Low_complexity 1 30 0 221 30 61 0 chrX_random 5768328 5768361 -3530645 + T-rich Low_complexity Low_complexity 2 36 0 2350 96 0 0 chrX_random 5768365 5768677 -3530329 - AluSx SINE Alu 0 312 1 284 298 12 12 chrX_random 5768760 5768844 -3530162 + MIR SINE MIR 178 261 -1 540 224 24 16 chrX_random 5768889 5769014 -3529992 - L2 LINE L2 -1 3312 3187 1030 84 0 0 chrX_random 5769494 5769637 -3529369 + L1MA1 LINE L1 6054 6196 -106 416 118 0 59 chrX_random 5770822 5770907 -3528099 - L1MA10 LINE L1 -2 6332 6253 322 154 0 0 chrX_random 5770984 5771036 -3527970 + L1PA16 LINE L1 5898 5949 -217 5255 129 19 38 chrX_random 5771036 5771983 -3527023 + L1PA16 LINE L1 5200 6128 -38 2197 96 24 0 chrX_random 5771983 5772274 -3526732 - AluSp SINE Alu -15 298 1 5255 129 19 38 chrX_random 5772274 5772311 -3526695 + L1PA16 LINE L1 6128 6164 -2 1229 134 46 14 chrX_random 5772327 5772544 -3526462 + L1PA16 LINE L1 5943 6166 0 248 179 0 0 chrX_random 5772749 5772788 -3526218 - U2 snRNA snRNA -147 41 3 751 282 61 63 chrX_random 5772848 5773277 -3525729 + MLT1L LTR MaLR 186 613 -2 628 273 79 0 chrX_random 5774402 5774567 -3524439 + MER5B DNA MER1_type 1 178 0 282 342 73 30 chrX_random 5774579 5774813 -3524193 + L2 LINE L2 2804 3047 -225 340 64 0 0 chrX_random 5774949 5774996 -3524010 - MADE1 DNA Mariner 0 80 34 263 356 19 0 chrX_random 5774997 5775101 -3523905 + L2 LINE L2 3195 3300 -13 30107 42 4 3 chrX_random 5775105 5778951 -3520055 + L1PA7 LINE L1 1644 5494 -660 2300 87 0 10 chrX_random 5778951 5779260 -3519746 + AluY SINE Alu 1 306 -5 30107 42 4 3 chrX_random 5779260 5779922 -3519084 + L1PA7 LINE L1 5494 6154 0 391 278 6 49 chrX_random 5780945 5781107 -3517899 + MLT1H LTR MaLR 21 175 -374 414 0 0 0 chrX_random 5781173 5781219 -3517787 + (A)n Simple_repeat Simple_repeat 1 46 0 21 0 0 0 chrX_random 5784060 5784081 -3514925 + AT_rich Low_complexity Low_complexity 1 21 0 204 97 0 0 chrX_random 5784410 5784441 -3514565 + (GA)n Simple_repeat Simple_repeat 1 31 0 411 202 0 0 chrX_random 5784513 5784597 -3514409 + L1M4 LINE L1 4499 4582 -1564 299 219 24 37 chrX_random 5784812 5784894 -3514112 + MLT1H LTR MaLR 23 103 -446 * 394 204 86 0 chrX_random 5784893 5784986 -3514020 + MLT1H LTR MaLR 433 533 -16 1530 204 92 55 chrX_random 5785703 5786212 -3512794 - L1ME2 LINE L1 -9 6155 5628 * 1767 254 84 34 chrX_random 5786209 5786537 -3512469 - L1ME2 LINE L1 -1542 4604 4294 288 0 0 0 chrX_random 5786537 5786569 -3512437 + (TA)n Simple_repeat Simple_repeat 1 32 0 1767 254 84 34 chrX_random 5786569 5786999 -3512007 - L1ME2 LINE L1 -1852 4294 3808 392 236 30 2 chrX_random 5786998 5787118 -3511888 + L1M4 LINE L1 2360 2481 -3665 * 333 258 0 0 chrX_random 5787335 5787424 -3511582 + L1MD1 LINE L1 6147 6235 -7 223 154 0 39 chrX_random 5787869 5787921 -3511085 + T-rich Low_complexity Low_complexity 2 51 0 1924 146 15 54 chrX_random 5788038 5788428 -3510578 - THE1C LTR MaLR 0 375 1 327 94 0 0 chrX_random 5788627 5788680 -3510326 + L1MA9 LINE L1 6222 6274 -38 22 80 0 0 chrX_random 5788680 5788730 -3510276 + AT_rich Low_complexity Low_complexity 1 50 0 315 266 68 54 chrX_random 5788730 5789139 -3509867 + L1M4 LINE L1 2850 3264 -2882 354 45 0 0 chrX_random 5789376 5789420 -3509586 + (CA)n Simple_repeat Simple_repeat 2 45 0 201 74 0 0 chrX_random 5789421 5789448 -3509558 + (TC)n Simple_repeat Simple_repeat 1 27 0 2061 115 7 0 chrX_random 5789604 5789899 -3509107 + AluSx SINE Alu 5 301 -11 3811 231 31 49 chrX_random 5790140 5791627 -3507379 + L1MA8 LINE L1 2410 3873 -3692 2351 68 0 0 chrX_random 5791627 5791922 -3507084 + AluY SINE Alu 1 295 -16 3811 231 31 49 chrX_random 5791922 5792288 -3506718 + L1MA8 LINE L1 3873 4244 -3321 * 9756 169 40 11 chrX_random 5792265 5795051 -3503955 + L1MA8 LINE L1 4845 7706 -4 482 295 34 22 chrX_random 5795084 5795814 -3503192 + L1ME4a LINE L1 5299 6023 -98 222 150 0 0 chrX_random 5795921 5795961 -3503045 + (TTATG)n Simple_repeat Simple_repeat 3 42 0 2243 88 3 7 chrX_random 5796071 5796366 -3502640 + AluSg SINE Alu 1 294 -16 486 175 45 2 chrX_random 5796401 5796510 -3502496 + L1MA9 LINE L1 6197 6320 -14 5902 165 15 20 chrX_random 5796571 5797984 -3501022 + L1MA7 LINE L1 4875 6287 -4 304 315 46 28 chrX_random 5797999 5798107 -3500899 + L1ME LINE L1 5480 5589 -532 363 61 0 91 chrX_random 5798187 5798253 -3500753 - L1PA6 LINE L1 0 6154 6095 28 29 0 0 chrX_random 5798329 5798364 -3500642 + AT_rich Low_complexity Low_complexity 1 35 0 474 263 19 32 chrX_random 5798477 5798633 -3500373 - MER5B DNA MER1_type -24 154 1 21 0 0 0 chrX_random 5799134 5799155 -3499851 + AT_rich Low_complexity Low_complexity 1 21 0 1475 346 144 21 chrX_random 5799298 5800884 -3498122 - L2 LINE L2 -5 3267 1494 706 192 7 7 chrX_random 5802814 5802965 -3496041 - LTR37A LTR ERV1 -3 423 273 1688 198 50 6 chrX_random 5802985 5803323 -3495683 - MLT1A1 LTR MaLR -12 353 1 451 237 101 19 chrX_random 5803329 5803536 -3495470 - LTR37A LTR ERV1 -162 264 41 5625 224 68 25 chrX_random 5803732 5803784 -3495222 - L1MD1 LINE L1 -1 6635 6587 1021 38 0 15 chrX_random 5803784 5803916 -3495090 + L1PA13 LINE L1 6021 6150 -13 5625 224 68 25 chrX_random 5803916 5806826 -3492180 - L1MD1 LINE L1 -49 6587 3540 1033 169 37 5 chrX_random 5806826 5807015 -3491991 - MLT1D LTR MaLR -310 195 1 459 238 15 145 chrX_random 5807015 5807222 -3491784 - MLT1D-int LTR MaLR 0 1734 1243 1244 232 12 0 chrX_random 5807227 5807481 -3491525 - L1MD1 LINE L1 -6257 283 27 24 0 0 0 chrX_random 5807836 5807860 -3491146 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chrX_random 5808212 5808241 -3490765 + AT_rich Low_complexity Low_complexity 1 29 0 325 289 0 9 chrX_random 5808266 5808380 -3490626 - L1MC4 LINE L1 0 8042 7930 233 220 38 38 chrX_random 5808409 5808541 -3490465 + (TATAA)n Simple_repeat Simple_repeat 5 136 0 299 198 42 62 chrX_random 5808547 5808643 -3490363 - L1MC4 LINE L1 -144 7898 7805 370 232 289 9 chrX_random 5808702 5808881 -3490125 - L1MC4 LINE L1 -172 7676 7415 856 127 45 13 chrX_random 5808938 5809095 -3489911 - L1MA8 LINE L1 -5 6286 6125 492 234 32 32 chrX_random 5809096 5809254 -3489752 - L1MC4 LINE L1 -1996 5812 5655 1657 275 16 18 chrX_random 5809429 5809865 -3489141 - LTR16A LTR ERVL 0 450 16 254 369 0 0 chrX_random 5810038 5810122 -3488884 + L2 LINE L2 3229 3312 -1 586 343 93 20 chrX_random 5810139 5810538 -3488468 + L3 LINE CR1 537 964 -613 597 192 0 0 chrX_random 5810560 5810680 -3488326 + (TA)n Simple_repeat Simple_repeat 1 120 0 204 222 0 0 chrX_random 5810706 5810742 -3488264 + (TATG)n Simple_repeat Simple_repeat 3 38 0 247 225 25 50 chrX_random 5811012 5811092 -3487914 + L1MA10 LINE L1 3705 3782 -2364 261 299 37 37 chrX_random 5811684 5811901 -3487105 + L1MA10 LINE L1 4405 4621 -1525 303 294 105 7 chrX_random 5812438 5812581 -3486425 + L1MA10 LINE L1 5266 5422 -2386 286 246 141 63 chrX_random 5812604 5812746 -3486260 - L2 LINE L2 -5 3308 3156 1960 147 0 0 chrX_random 5812752 5813038 -3485968 + AluSx SINE Alu 1 286 -26 987 203 75 62 chrX_random 5813081 5813387 -3485619 + L1MA10 LINE L1 6025 6334 0 5394 140 27 4 chrX_random 5813624 5814643 -3484363 + L1MB1 LINE L1 5126 6167 -1 3809 229 43 30 chrX_random 5814653 5816194 -3482812 - L1MC4a LINE L1 -17 7791 4761 823 144 0 8 chrX_random 5816221 5816346 -3482660 - FLAM_C SINE Alu -9 124 1 355 339 52 62 chrX_random 5816520 5816889 -3482117 + L1MEd LINE L1 3 367 -5752 254 298 85 40 chrX_random 5817009 5817257 -3481749 + L1MEd LINE L1 532 790 -5329 307 114 14 207 chrX_random 5817296 5817393 -3481613 - Charlie5 DNA MER1_type -3 2582 2518 2048 137 0 0 chrX_random 5817393 5817700 -3481306 + AluJb SINE Alu 2 308 -4 307 114 14 207 chrX_random 5817700 5817742 -3481264 - Charlie5 DNA MER1_type -67 2518 2470 432 270 55 110 chrX_random 5817867 5818104 -3480902 - L2 LINE L2 -3 3310 3087 261 119 0 0 chrX_random 5818106 5818148 -3480858 + (TG)n Simple_repeat Simple_repeat 1 42 0 217 357 0 0 chrX_random 5818162 5818232 -3480774 - L2 LINE L2 -234 3079 3010 231 234 45 90 chrX_random 5818238 5818349 -3480657 + L1MEd LINE L1 897 1002 -5117 708 131 24 95 chrX_random 5818482 5818650 -3480356 - Charlie5 DNA MER1_type 0 2624 2469 338 232 14 0 chrX_random 5818648 5818717 -3480289 - Charlie5 DNA MER1_type -2542 70 1 * 23 0 0 0 chrX_random 5820132 5820155 -3478851 + AT_rich Low_complexity Low_complexity 1 23 0 192 179 0 0 chrX_random 5821384 5821423 -3477583 + (TCTA)n Simple_repeat Simple_repeat 4 42 0 266 267 52 43 chrX_random 5821447 5821563 -3477443 - MIR SINE MIR -72 190 74 2534 11 0 0 chrX_random 5821816 5822093 -3476913 - AluYa5 SINE Alu -13 298 22 316 321 101 46 chrX_random 5822405 5822623 -3476383 - MIR SINE MIR -13 249 20 421 60 0 0 chrX_random 5822698 5822748 -3476258 + THE1A LTR MaLR 306 355 0 284 222 50 40 chrX_random 5822748 5822847 -3476159 - L1M2 LINE L1 -6496 353 254 273 319 100 31 chrX_random 5823045 5823205 -3475801 - MIR3 SINE MIR -15 193 23 2573 119 25 46 chrX_random 5823412 5823848 -3475158 - MSTA LTR MaLR 0 428 2 244 347 35 28 chrX_random 5823970 5824114 -3474892 + L2 LINE L2 3163 3307 -6 335 289 63 6 chrX_random 5824361 5824520 -3474486 - L1ME4a LINE L1 -16 6105 5938 7490 155 32 8 chrX_random 5824524 5826894 -3472112 + L1MA4A LINE L1 3879 6299 -4 1045 201 18 75 chrX_random 5826908 5827292 -3471714 + L1MC5 LINE L1 6924 7285 -676 217 307 0 13 chrX_random 5827301 5827376 -3471630 + MIR SINE MIR 158 231 -31 1366 219 55 59 chrX_random 5827868 5828325 -3470681 + MLT1C LTR MaLR 13 467 0 1197 121 11 0 chrX_random 5828873 5829055 -3469951 + MER46B DNA MER2_type 1 59 -177 289 286 23 30 chrX_random 5829103 5829236 -3469770 - L1ME4a LINE L1 -365 5756 5625 22 0 0 0 chrX_random 5830227 5830249 -3468757 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chrX_random 5830269 5830292 -3468714 + (TG)n Simple_repeat Simple_repeat 2 24 0 387 263 26 0 chrX_random 5830393 5830545 -3468461 - L1ME4a LINE L1 -285 5836 5678 1051 298 34 29 chrX_random 5830741 5831157 -3467849 + LTR16C LTR ERVL 74 491 0 2233 99 0 0 chrX_random 5831309 5831603 -3467403 + AluSg SINE Alu 1 294 -16 915 204 24 19 chrX_random 5832054 5832260 -3466746 + MER3 DNA MER1_type 2 208 -1 717 280 121 0 chrX_random 5832475 5832707 -3466299 - MIR SINE MIR 0 262 3 191 352 40 45 chrX_random 5833845 5834021 -3464985 - L2 LINE L2 -410 2904 2730 180 111 0 0 chrX_random 5835428 5835455 -3463551 + (CATA)n Simple_repeat Simple_repeat 4 30 0 271 330 33 17 chrX_random 5836096 5836306 -3462700 + L3 LINE CR1 935 1198 -379 193 291 67 60 chrX_random 5836302 5836436 -3462570 + L2 LINE L2 2356 2490 -824 * 348 362 8 0 chrX_random 5836695 5836822 -3462184 + L2 LINE L2 2507 2634 -680 309 304 104 0 chrX_random 5836826 5836961 -3462045 - MIR SINE MIR -49 213 65 3232 152 37 13 chrX_random 5838137 5838757 -3460249 + L1MC1 LINE L1 5699 6333 0 1908 261 44 26 chrX_random 5838763 5838895 -3460111 + HAL1b LINE L1 171 299 -1049 1418 193 147 46 chrX_random 5838895 5839310 -3459696 - MSTB2 LTR MaLR 0 457 1 1908 261 44 26 chrX_random 5839310 5839955 -3459051 + HAL1b LINE L1 299 962 -386 2105 117 3 0 chrX_random 5840401 5840730 -3458276 - AluSx SINE Alu 0 330 1 321 259 38 70 chrX_random 5840955 5841113 -3457893 - MER31-int LTR ERV1 -1870 3066 2914 252 0 0 0 chrX_random 5841192 5841220 -3457786 + (T)n Simple_repeat Simple_repeat 1 28 0 25 51 0 0 chrX_random 5841263 5841302 -3457704 + AT_rich Low_complexity Low_complexity 1 39 0 450 94 0 0 chrX_random 5841665 5841729 -3457277 + (TTCC)n Simple_repeat Simple_repeat 1 64 0 32 0 0 0 chrX_random 5842732 5842764 -3456242 + AT_rich Low_complexity Low_complexity 1 32 0 518 262 11 66 chrX_random 5843052 5843323 -3455683 - MER31-int LTR ERV1 -3640 1296 1041 198 148 16 33 chrX_random 5843570 5843631 -3455375 + A-rich Low_complexity Low_complexity 1 60 0 707 231 67 25 chrX_random 5843796 5844034 -3454972 - LTR37B LTR ERV1 0 468 221 439 135 22 67 chrX_random 5844035 5844124 -3454882 - MER53 DNA DNA 0 189 105 2011 107 7 10 chrX_random 5844380 5844670 -3454336 + AluSg SINE Alu 1 289 -21 318 198 162 45 chrX_random 5845273 5845384 -3453622 - L2 LINE L2 0 3313 3190 436 304 56 37 chrX_random 5846242 5846512 -3452494 + MLT1J LTR MaLR 230 504 -7 425 287 140 13 chrX_random 5846652 5846809 -3452197 - MER5A DNA MER1_type -4 185 9 30 0 0 0 chrX_random 5847053 5847083 -3451923 + AT_rich Low_complexity Low_complexity 1 30 0 781 177 20 110 chrX_random 5847086 5847340 -3451666 - LTR37B LTR ERV1 -63 405 175 2139 119 0 0 chrX_random 5847903 5848220 -3450786 - AluSq SINE Alu 0 317 1 302 294 73 62 chrX_random 5848306 5848578 -3450428 + L1M4 LINE L1 20 294 -6565 2937 233 57 15 chrX_random 5848616 5849146 -3449860 + L1M4 LINE L1 3479 3985 -2972 763 168 7 19 chrX_random 5849146 5849301 -3449705 - L1PB4 LINE L1 0 6156 6004 2937 233 57 15 chrX_random 5849301 5849767 -3449239 + L1M4 LINE L1 3985 4517 -2440 1844 186 53 8 chrX_random 5849767 5850128 -3448878 + MSTD LTR MaLR 1 377 -19 803 175 0 76 chrX_random 5850158 5850292 -3448714 + L1ME1 LINE L1 5701 5813 -351 2100 179 6 3 chrX_random 5850292 5850656 -3448350 + MLT1A1 LTR MaLR 1 365 0 803 175 0 76 chrX_random 5850656 5850744 -3448262 + L1ME1 LINE L1 5813 5906 -258 31856 104 11 56 chrX_random 5850748 5853356 -3445650 + L1PA7 LINE L1 2 2724 -3430 225 65 0 0 chrX_random 5853356 5853387 -3445619 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 31856 104 11 56 chrX_random 5853387 5857222 -3441784 + L1PA7 LINE L1 2724 6152 -2 534 269 46 32 chrX_random 5857218 5857437 -3441569 + L1ME1 LINE L1 5891 6112 -54 * 531 220 75 6 chrX_random 5857330 5857489 -3441517 + L1MA10 LINE L1 6165 6334 0 * 4312 242 75 22 chrX_random 5857497 5857520 -3441486 + L1MC2 LINE L1 3504 3524 -2622 2967 65 5 27 chrX_random 5857520 5857932 -3441074 + L1PA8A LINE L1 5729 6131 0 4312 242 75 22 chrX_random 5857932 5859622 -3439384 + L1MC2 LINE L1 3524 5349 -797 4445 148 16 1 chrX_random 5859623 5860391 -3438615 + L1MC2 LINE L1 5550 6328 -16 255 282 35 0 chrX_random 5861368 5861453 -3437553 - L1MC4a LINE L1 -1647 6161 6074 313 257 0 29 chrX_random 5862870 5862940 -3436066 + L2 LINE L2 3205 3272 0 283 194 0 0 chrX_random 5863858 5863920 -3435086 + L1MA9 LINE L1 6213 6274 -38 226 209 0 0 chrX_random 5864532 5864575 -3434431 + (CA)n Simple_repeat Simple_repeat 1 43 0 727 232 17 17 chrX_random 5864652 5864829 -3434177 - MER5B DNA MER1_type -1 177 1 1833 68 17 0 chrX_random 5865410 5865646 -3433360 + L1PA7 LINE L1 5912 6151 -3 25 0 0 0 chrX_random 5865918 5865943 -3433063 + AT_rich Low_complexity Low_complexity 1 25 0 273 29 0 0 chrX_random 5868107 5868141 -3430865 + (TC)n Simple_repeat Simple_repeat 1 34 0 933 206 6 0 chrX_random 5868328 5868493 -3430513 - MER58A DNA MER1_type -40 184 19 242 167 17 0 chrX_random 5869124 5869184 -3429822 + CT-rich Low_complexity Low_complexity 1 61 0 2488 200 60 15 chrX_random 5871354 5872098 -3426908 - MER21B LTR ERV1 -52 811 1 417 296 104 0 chrX_random 5873356 5873471 -3425535 + L2 LINE L2 3187 3313 0 717 221 99 41 chrX_random 5874533 5874705 -3424301 + MER45 DNA AcHobo 7 188 -1393 573 196 107 0 chrX_random 5874703 5874815 -3424191 + MER45 DNA AcHobo 1458 1581 0 * 21 36 0 0 chrX_random 5875525 5875553 -3423453 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chrX_random 5875775 5875801 -3423205 + AT_rich Low_complexity Low_complexity 1 26 0 183 293 41 89 chrX_random 5876237 5876360 -3422646 + L2 LINE L2 2420 2536 -778 365 286 0 0 chrX_random 5876761 5876845 -3422161 - MIR SINE MIR -20 242 159 379 299 36 29 chrX_random 5877693 5877830 -3421176 + L2 LINE L2 2852 2989 -283 216 0 0 0 chrX_random 5878809 5878833 -3420173 + (TC)n Simple_repeat Simple_repeat 2 25 0 1607 291 76 23 chrX_random 5879704 5880522 -3418484 + L1ME2 LINE L1 5296 6156 -8 757 286 120 26 chrX_random 5881141 5881606 -3417400 - L1ME3A LINE L1 -222 5948 5440 529 320 68 28 chrX_random 5881611 5882157 -3416849 - L1ME3A LINE L1 -757 5389 4822 21 57 0 0 chrX_random 5882690 5882725 -3416281 + AT_rich Low_complexity Low_complexity 1 35 0 244 140 53 0 chrX_random 5882739 5882796 -3416210 + (TA)n Simple_repeat Simple_repeat 1 60 0 348 139 57 0 chrX_random 5882948 5883106 -3415900 + (TA)n Simple_repeat Simple_repeat 1 167 0 29 0 0 0 chrX_random 5883111 5883140 -3415866 + AT_rich Low_complexity Low_complexity 1 29 0 569 126 67 0 chrX_random 5883146 5883481 -3415525 + (TA)n Simple_repeat Simple_repeat 1 357 0 501 92 92 0 chrX_random 5884477 5884641 -3414365 + (TA)n Simple_repeat Simple_repeat 1 179 0 522 61 63 40 chrX_random 5884665 5885014 -3413992 + (TA)n Simple_repeat Simple_repeat 1 357 0 585 74 51 34 chrX_random 5885051 5885227 -3413779 + (TA)n Simple_repeat Simple_repeat 2 180 0 29 47 0 0 chrX_random 5885227 5885270 -3413736 + AT_rich Low_complexity Low_complexity 1 43 0 2005 154 43 6 chrX_random 5885270 5885615 -3413391 - L1M2 LINE L1 -521 5791 5434 4881 160 14 28 chrX_random 5885647 5886061 -3412945 - L1MA7 LINE L1 -1 6290 5872 405 0 0 0 chrX_random 5886061 5886106 -3412900 + (TA)n Simple_repeat Simple_repeat 2 46 0 4881 160 14 28 chrX_random 5886106 5887115 -3411891 - L1MA7 LINE L1 -419 5872 4850 798 102 86 0 chrX_random 5887115 5887243 -3411763 - MER85 DNA T2_type 0 139 1 4881 160 14 28 chrX_random 5887243 5887342 -3411664 - L1MA7 LINE L1 -1441 4850 4751 186 43 0 0 chrX_random 5887342 5887365 -3411641 + (TG)n Simple_repeat Simple_repeat 1 23 0 4881 160 14 28 chrX_random 5887365 5887611 -3411395 - L1MA7 LINE L1 -1540 4751 4444 225 205 0 0 chrX_random 5887611 5887650 -3411356 + tRNA-Val-GTG tRNA tRNA 2 40 -36 1568 183 37 20 chrX_random 5887650 5888038 -3410968 - L1M2 LINE L1 -732 5436 5048 * 6449 171 28 5 chrX_random 5888026 5889294 -3409712 - L1M2 LINE L1 -1336 4810 3513 835 226 5 41 chrX_random 5889660 5889855 -3409151 - MER5A DNA MER1_type -1 188 1 1940 122 0 27 chrX_random 5890842 5891136 -3407870 - AluSx SINE Alu -13 299 14 6820 124 25 2 chrX_random 5892252 5893825 -3405181 - L1MA3 LINE L1 0 6305 4700 284 219 90 80 chrX_random 5894678 5894879 -3404127 + L2 LINE L2 3111 3313 0 2360 68 3 13 chrX_random 5895558 5895867 -3403139 + AluY SINE Alu 1 306 -5 377 308 70 7 chrX_random 5896435 5896578 -3402428 - MIR3 SINE MIR -14 194 43 444 298 24 0 chrX_random 5896624 5896748 -3402258 + MIR SINE MIR 31 157 -105 274 247 106 12 chrX_random 5897326 5897411 -3401595 - L3 LINE CR1 -540 1037 945 414 321 43 73 chrX_random 5897411 5897713 -3401293 - L3 LINE CR1 -815 762 470 290 67 0 44 chrX_random 5898130 5898175 -3400831 + Alu SINE Alu 249 291 -11 690 216 75 61 chrX_random 5898614 5898824 -3400182 + LTR50 LTR ERVL 1 212 -309 * 886 274 205 3 chrX_random 5898820 5899210 -3399796 + LTR50 LTR ERVL 327 795 0 278 276 68 53 chrX_random 5899225 5899395 -3399611 - MIR SINE MIR -67 141 13 253 319 21 61 chrX_random 5899795 5899983 -3399023 + MIR SINE MIR 10 187 -75 34 55 0 0 chrX_random 5901208 5901263 -3397743 + AT_rich Low_complexity Low_complexity 1 55 0 807 273 36 24 chrX_random 5901541 5901790 -3397216 - MIR SINE MIR -5 257 6 227 270 86 86 chrX_random 5902314 5902477 -3396529 - MIR3 SINE MIR -39 169 7 348 344 72 0 chrX_random 5904573 5904698 -3394308 - L2 LINE L2 0 3272 3139 1072 307 18 12 chrX_random 5904742 5905074 -3393932 - LTR16A LTR ERVL 0 450 117 195 71 0 0 chrX_random 5906248 5906276 -3392730 - L2 LINE L2 -2 3311 3284 257 264 0 120 chrX_random 5906277 5906402 -3392604 - LTR16A1 LTR ERVL -1 456 347 409 312 60 64 chrX_random 5906662 5906944 -3392062 - L2 LINE L2 -25 3288 3008 528 283 159 32 chrX_random 5907324 5907632 -3391374 + L1MEd LINE L1 474 820 -5299 24 0 0 0 chrX_random 5907783 5907807 -3391199 + AT_rich Low_complexity Low_complexity 1 24 0 2381 55 19 3 chrX_random 5907812 5908124 -3390882 - L1PA12 LINE L1 0 6168 5852 2349 211 41 8 chrX_random 5908545 5909080 -3389926 + MER90 LTR ERV1 62 614 0 409 296 52 7 chrX_random 5909512 5909647 -3389359 + MLT1J LTR MaLR 7 147 -364 897 323 37 56 chrX_random 5909674 5910105 -3388901 + L3 LINE CR1 1152 1574 -3 317 232 21 63 chrX_random 5911036 5911131 -3387875 + LTR33A LTR ERVL 24 136 -387 314 203 29 74 chrX_random 5911219 5911341 -3387665 + LTR33A LTR ERVL 406 620 -8 219 318 65 9 chrX_random 5913181 5913288 -3385718 - MIR SINE MIR -10 252 140 45 69 0 0 chrX_random 5913930 5914017 -3384989 + AT_rich Low_complexity Low_complexity 1 87 0 507 17 0 0 chrX_random 5915115 5915175 -3383831 + (TG)n Simple_repeat Simple_repeat 2 61 0 243 364 6 34 chrX_random 5915328 5915504 -3383502 - HAL1 LINE L1 -2334 173 3 201 328 0 0 chrX_random 5915676 5915734 -3383272 + CT-rich Low_complexity Low_complexity 3 60 0 671 223 0 0 chrX_random 5915860 5915981 -3383025 + FLAM_A SINE Alu 1 121 -12 22 70 0 0 chrX_random 5915989 5916032 -3382974 + AT_rich Low_complexity Low_complexity 1 43 0 243 188 58 14 chrX_random 5916150 5916219 -3382787 + L1ME LINE L1 5750 5821 -349 207 114 0 0 chrX_random 5916388 5916423 -3382583 + (T)n Simple_repeat Simple_repeat 1 35 0 4812 190 13 9 chrX_random 6117069 6117936 -3181070 + L1 LINE L1 3977 4850 -1296 2123 120 3 7 chrX_random 6117936 6118244 -3180762 - AluSg SINE Alu -3 307 1 4812 190 13 9 chrX_random 6118244 6118356 -3180650 + L1 LINE L1 4850 4960 -1186 1204 249 7 83 chrX_random 6119166 6119486 -3179520 + MLT1E2 LTR MaLR 1 281 -345 2029 151 34 17 chrX_random 6119486 6119844 -3179162 - MLT1A1 LTR MaLR -1 364 1 1204 249 7 83 chrX_random 6119844 6119956 -3179050 + MLT1E2 LTR MaLR 281 400 -226 523 148 9 9 chrX_random 6120065 6120173 -3178833 + G-rich Low_complexity Low_complexity 5 112 0 30 69 0 0 chrX_random 6121658 6121716 -3177290 + AT_rich Low_complexity Low_complexity 1 58 0 192 276 40 53 chrX_random 6122094 6122170 -3176836 + MIR SINE MIR 56 130 -132 2307 227 48 33 chrX_random 6123665 6124458 -3174548 - L1M4 LINE L1 -4906 1636 832 256 293 24 12 chrX_random 6124606 6124688 -3174318 - L1M4 LINE L1 -5711 935 853 3432 151 33 14 chrX_random 6124692 6125355 -3173651 - L1MA8 LINE L1 0 6291 5616 25 31 0 0 chrX_random 6125481 6125513 -3173493 + AT_rich Low_complexity Low_complexity 1 32 0 800 208 150 48 chrX_random 6127357 6127555 -3171451 - L1MC4 LINE L1 -18 8024 7781 1445 97 69 5 chrX_random 6127555 6127771 -3171235 + MER30 DNA MER1_type 1 230 0 800 208 150 48 chrX_random 6127771 6127885 -3171121 - L1MC4 LINE L1 -261 7781 7680 2427 67 0 0 chrX_random 6127895 6128192 -3170814 + AluY SINE Alu 2 298 -13 1189 175 14 27 chrX_random 6128359 6128582 -3170424 + AluJo SINE Alu 58 277 -35 1254 136 18 9 chrX_random 6128597 6128825 -3170181 + L1PA15 LINE L1 5936 6165 0 1085 191 14 0 chrX_random 6128830 6129045 -3169961 + L1M1 LINE L1 5495 5712 -591 11536 214 21 17 chrX_random 6129068 6131844 -3167162 + L1P LINE L1 1982 4770 -1376 2215 71 6 56 chrX_random 6131917 6132241 -3166765 + AluY SINE Alu 1 308 -3 505 144 206 0 chrX_random 6133337 6133455 -3165551 - L1MC4 LINE L1 -221 7774 7543 26 0 0 0 chrX_random 6134178 6134204 -3164802 + AT_rich Low_complexity Low_complexity 1 26 0 22 0 0 0 chrX_random 6135191 6135213 -3163793 + AT_rich Low_complexity Low_complexity 1 22 0 318 106 0 0 chrX_random 6136084 6136131 -3162875 + (T)n Simple_repeat Simple_repeat 1 47 0 4737 216 16 5 chrX_random 6136155 6137392 -3161614 + L1 LINE L1 2479 3802 -2344 13416 194 27 14 chrX_random 6137891 6138804 -3160202 + L1MA1 LINE L1 2936 3836 -3885 2478 54 0 0 chrX_random 6138804 6139100 -3159906 - AluY SINE Alu -15 296 1 13416 194 27 14 chrX_random 6139100 6141848 -3157158 + L1MA1 LINE L1 3836 6676 -1045 2150 152 3 0 chrX_random 6141848 6142184 -3156822 - MER1B DNA MER1_type 0 337 1 13416 194 27 14 chrX_random 6142184 6142955 -3156051 + L1MA1 LINE L1 6676 7436 -285 789 213 38 19 chrX_random 6142960 6143171 -3155835 - L1M1 LINE L1 -4231 3334 3120 24 0 0 0 chrX_random 6143317 6143341 -3155665 + AT_rich Low_complexity Low_complexity 1 24 0 1823 328 17 26 chrX_random 6144497 6145192 -3153814 + L1 LINE L1 1 689 -6479 4259 246 47 4 chrX_random 6145639 6146812 -3152194 + L1 LINE L1 1768 2990 -4178 7321 181 13 8 chrX_random 6146929 6148403 -3150603 + L1 LINE L1 4862 6342 -825 367 19 19 0 chrX_random 6148542 6148594 -3150412 + L1MA3 LINE L1 6253 6305 0 23 54 0 0 chrX_random 6148880 6148917 -3150089 + AT_rich Low_complexity Low_complexity 1 37 0 414 244 102 24 chrX_random 6149351 6149478 -3149528 - L2 LINE L2 0 3313 3177 3043 114 7 2 chrX_random 6149479 6149925 -3149081 + MER75 DNA T2_type 67 514 0 635 268 31 0 chrX_random 6149925 6150119 -3148887 + L1P LINE L1 2360 2559 -3587 1562 245 11 3 chrX_random 6150128 6150507 -3148499 + L1 LINE L1 4181 4562 -1584 1113 249 52 8 chrX_random 6150502 6150817 -3148189 - L1ME1 LINE L1 -16 6150 5824 * 5534 165 17 32 chrX_random 6150965 6152606 -3146400 + L1PA16 LINE L1 4551 6166 0 684 157 28 24 chrX_random 6152798 6153039 -3145967 + GA-rich Low_complexity Low_complexity 1 242 0 562 76 0 25 chrX_random 6153039 6153118 -3145888 + (GGAA)n Simple_repeat Simple_repeat 4 80 0 429 20 0 0 chrX_random 6153977 6154027 -3144979 + (TCCA)n Simple_repeat Simple_repeat 4 53 0 320 342 179 4 chrX_random 6154044 6154284 -3144722 - L2 LINE L2 -40 3273 2992 372 397 22 0 chrX_random 6154542 6154678 -3144328 - L2 LINE L2 -13 3259 3121 22 56 0 0 chrX_random 6154695 6154731 -3144275 + AT_rich Low_complexity Low_complexity 1 36 0 28 86 0 0 chrX_random 6154981 6155051 -3143955 + AT_rich Low_complexity Low_complexity 1 70 0 47 67 0 0 chrX_random 6155429 6155518 -3143488 + AT_rich Low_complexity Low_complexity 1 89 0 237 220 0 20 chrX_random 6155794 6155844 -3143162 + MER94 DNA DNA 61 109 -25 273 291 228 0 chrX_random 6156158 6156285 -3142721 + MER5A DNA MER1_type 34 189 0 2919 99 20 20 chrX_random 6156403 6156847 -3142159 - MLT2A1 LTR ERVL 0 444 1 27 29 0 0 chrX_random 6157255 6157289 -3141717 + AT_rich Low_complexity Low_complexity 1 34 0 237 263 12 12 chrX_random 6157708 6157788 -3141218 + L1MC4 LINE L1 6619 6698 -1344 28 29 0 0 chrX_random 6157905 6157940 -3141066 + AT_rich Low_complexity Low_complexity 1 35 0 228 255 0 0 chrX_random 6158040 6158087 -3140919 - MER5A DNA MER1_type 0 189 143 1199 221 10 24 chrX_random 6158123 6158412 -3140594 + L1MCa LINE L1 414 698 -5728 * 4314 237 72 91 chrX_random 6158400 6159553 -3139453 + L1M4 LINE L1 3193 4367 -1779 601 172 33 57 chrX_random 6159553 6159675 -3139331 + AluJb SINE Alu 157 275 -37 423 0 0 0 chrX_random 6159676 6159723 -3139283 + (TG)n Simple_repeat Simple_repeat 2 48 0 4314 237 72 91 chrX_random 6159723 6160596 -3138410 + L1M4 LINE L1 4366 5300 -846 8080 236 45 50 chrX_random 6160643 6164828 -3134178 + L1MB1 LINE L1 2461 6447 -1 668 281 0 0 chrX_random 6164848 6164994 -3134012 - MER5A DNA MER1_type -36 153 8 689 337 47 56 chrX_random 6166980 6167289 -3131717 + L2 LINE L2 2510 2820 -493 2497 48 0 0 chrX_random 6167289 6167579 -3131427 + AluY SINE Alu 1 290 -21 689 337 47 56 chrX_random 6167579 6168063 -3130943 + L2 LINE L2 2820 3305 -8 1374 303 83 23 chrX_random 6168128 6168643 -3130363 - MLT1H1 LTR MaLR 0 555 10 24 20 0 60 chrX_random 6169423 6169473 -3129533 + AT_rich Low_complexity Low_complexity 1 47 0 230 279 192 0 chrX_random 6169479 6169583 -3129423 + MIR3 SINE MIR 50 173 -35 10579 233 53 17 chrX_random 6169757 6172329 -3126677 + L1MA3 LINE L1 11 2675 -4174 2233 76 7 33 chrX_random 6172457 6172760 -3126246 - AluSc SINE Alu -14 295 1 5852 161 12 14 chrX_random 6172761 6174436 -3124570 + L1MA3 LINE L1 5333 7003 -4 1163 248 55 3 chrX_random 6174459 6174822 -3124184 + L1M1 LINE L1 3159 3540 -3308 250 303 29 23 chrX_random 6174823 6174998 -3124008 + (CATATA)n Simple_repeat Simple_repeat 5 180 0 9401 204 30 40 chrX_random 6175012 6177492 -3121514 + L1M1 LINE L1 3551 6053 -872 2010 139 0 25 chrX_random 6177492 6177809 -3121197 + AluSx SINE Alu 1 309 -3 9401 204 30 40 chrX_random 6177809 6177885 -3121121 + L1M1 LINE L1 6053 6094 -831 2279 96 0 0 chrX_random 6177885 6178176 -3120830 + AluSg SINE Alu 1 291 -19 9401 204 30 40 chrX_random 6178176 6178258 -3120748 + L1M1 LINE L1 6094 6175 -750 498 149 0 23 chrX_random 6178265 6178352 -3120654 - L1P LINE L1 -1365 4781 4697 1718 98 53 8 chrX_random 6178359 6178623 -3120383 - L1PA10 LINE L1 -5 6163 5888 4285 100 36 0 chrX_random 6178724 6179644 -3119362 - L1PA10 LINE L1 -295 5873 4922 632 188 73 18 chrX_random 6179651 6179816 -3119190 - L1P LINE L1 -1459 4687 4514 * 3085 167 20 7 chrX_random 6179807 6180806 -3118200 + L1P4 LINE L1 4800 5809 -356 * 8564 181 22 23 chrX_random 6180786 6182234 -3116772 + L1MA1 LINE L1 3372 4819 -1483 238 122 0 0 chrX_random 6182234 6182275 -3116731 - Alu SINE Alu -258 42 2 8564 181 22 23 chrX_random 6182275 6183715 -3115291 + L1MA1 LINE L1 4819 6298 -4 700 335 29 14 chrX_random 6185426 6185704 -3113302 + LTR16C LTR ERVL 180 461 -30 24080 162 21 36 chrX_random 6185890 6192440 -3106566 + L1PA10 LINE L1 1 6481 -2 250 316 11 0 chrX_random 6192546 6192641 -3106365 - MER103 DNA DNA -14 152 57 285 306 27 9 chrX_random 6193798 6193909 -3105097 + MIR SINE MIR 148 260 -2 210 394 0 14 chrX_random 6193936 6194007 -3104999 + L2 LINE L2 3106 3175 -97 2219 112 3 0 chrX_random 6195204 6195499 -3103507 + AluSq SINE Alu 2 297 -16 1808 183 16 55 chrX_random 6195597 6195964 -3103042 - MSTB LTR MaLR -73 353 1 2212 182 61 26 chrX_random 6195964 6196028 -3102978 + L1MA9 LINE L1 5713 5773 -539 198 71 0 0 chrX_random 6196028 6196056 -3102950 + (TA)n Simple_repeat Simple_repeat 1 28 0 2212 182 61 26 chrX_random 6196056 6196215 -3102791 + L1MA9 LINE L1 5773 5925 -387 2047 138 0 3 chrX_random 6196215 6196520 -3102486 + AluSx SINE Alu 2 305 -7 2212 182 61 26 chrX_random 6196520 6196833 -3102173 + L1MA9 LINE L1 5925 6269 -43 2175 252 69 23 chrX_random 6196899 6198127 -3100879 + L1M4c LINE L1 2017 3318 -3064 3803 214 28 0 chrX_random 6198137 6198843 -3100163 + L1P4 LINE L1 2 727 -6060 1776 179 0 6 chrX_random 6198893 6199592 -3099414 + L1P4 LINE L1 874 1710 -5077 * 6440 170 41 2 chrX_random 6199584 6201026 -3097980 + L1P4 LINE L1 4650 6154 -665 2439 264 31 24 chrX_random 6201029 6201476 -3097530 + L1 LINE L1 2572 3014 -3132 1734 159 70 28 chrX_random 6201476 6201835 -3097171 - THE1C LTR MaLR -1 374 1 2439 264 31 24 chrX_random 6201835 6202389 -3096617 + L1 LINE L1 3014 3580 -2566 26 30 0 0 chrX_random 6203484 6203517 -3095489 + AT_rich Low_complexity Low_complexity 1 33 0 3784 272 103 20 chrX_random 6204147 6205553 -3093453 + L1MA1 LINE L1 1 1523 -5686 1515 110 5 5 chrX_random 6205557 6205776 -3093230 + AluSg/x SINE Alu 88 306 -6 720 176 11 5 chrX_random 6205781 6205969 -3093037 + L1MA1 LINE L1 2127 2315 -4894 15345 188 21 36 chrX_random 6205982 6208613 -3090393 + L1M1 LINE L1 9 2678 -4887 192 40 0 0 chrX_random 6208613 6208638 -3090368 + (TTA)n Simple_repeat Simple_repeat 3 27 0 668 38 0 0 chrX_random 6208638 6208717 -3090289 - L1PA4 LINE L1 -18 6137 6059 15345 188 21 36 chrX_random 6208717 6208813 -3090193 + L1M1 LINE L1 2677 2773 -4792 2407 81 3 0 chrX_random 6208813 6209110 -3089896 + AluSp SINE Alu 1 298 -15 15345 188 21 36 chrX_random 6209110 6209474 -3089532 + L1M1 LINE L1 2773 3056 -4509 6315 164 19 8 chrX_random 6209474 6211666 -3087340 + L1MA1 LINE L1 4991 7205 -159 3663 242 39 20 chrX_random 6211766 6213865 -3085141 + L1M1 LINE L1 3078 5207 -2358 5947 204 48 2 chrX_random 6213878 6215059 -3083947 + L1PBa LINE L1 3 1238 -5625 436 263 9 94 chrX_random 6215059 6215272 -3083734 + Charlie2 DNA MER1_type 28 222 -2640 432 238 9 0 chrX_random 6215362 6215467 -3083539 + Charlie2 DNA MER1_type 1856 1961 -901 2434 58 0 16 chrX_random 6215476 6215784 -3083222 + AluY SINE Alu 1 303 -8 275 200 78 44 chrX_random 6215784 6215874 -3083132 + Charlie2 DNA MER1_type 2037 2129 -733 1180 248 49 29 chrX_random 6215979 6216527 -3082479 + Charlie2 DNA MER1_type 2287 2845 -17 1046 196 73 7 chrX_random 6218350 6218625 -3080381 - L1MA4 LINE L1 -7 6293 6001 190 350 117 0 chrX_random 6218708 6218828 -3080178 - MIR SINE MIR -15 247 114 648 168 0 0 chrX_random 6219879 6219992 -3079014 + MER3 DNA MER1_type 97 209 0 234 380 23 8 chrX_random 6220019 6220148 -3078858 - MLT1J1 LTR MaLR -224 222 92 343 271 18 113 chrX_random 6220371 6220592 -3078414 - MER112 DNA MER1_type -54 206 7 23 0 0 0 chrX_random 6220734 6220757 -3078249 + AT_rich Low_complexity Low_complexity 1 23 0 5303 104 8 7 chrX_random 6220757 6221523 -3077483 - L1PA13 LINE L1 -4 6159 5393 3551 146 32 2 chrX_random 6221521 6222151 -3076855 + L1PA13 LINE L1 4715 5363 -783 * 331 68 34 0 chrX_random 6222247 6222306 -3076700 + (TG)n Simple_repeat Simple_repeat 2 62 0 8520 143 45 16 chrX_random 6222679 6225194 -3073812 + L1PB1 LINE L1 6 2971 -3892 3832 112 0 0 chrX_random 6225248 6225898 -3073108 + L1PB1 LINE L1 5857 6506 -361 222 198 23 23 chrX_random 6225950 6226011 -3072995 + (TATAA)n Simple_repeat Simple_repeat 5 68 -22 2110 142 22 6 chrX_random 6226011 6226371 -3072635 + L1PB1 LINE L1 6500 6865 -2 222 198 23 23 chrX_random 6226371 6226395 -3072611 + (TATAA)n Simple_repeat Simple_repeat 67 90 0 185 333 24 72 chrX_random 6226621 6226828 -3072178 + L2 LINE L2 2734 2930 -384 2101 114 0 3 chrX_random 6226861 6227169 -3071837 - AluSx SINE Alu -5 307 1 1055 276 35 81 chrX_random 6227275 6227989 -3071017 - L2 LINE L2 -1 3312 2636 245 284 0 0 chrX_random 6228054 6228121 -3070885 + (TA)n Simple_repeat Simple_repeat 1 67 0 243 279 130 19 chrX_random 6228122 6228276 -3070730 + MER112 DNA MER1_type 81 251 -9 660 326 35 38 chrX_random 6228278 6228622 -3070384 - L2 LINE L2 -684 2630 2288 269 241 170 57 chrX_random 6228782 6228923 -3070083 + L2 LINE L2 3140 3296 -17 1040 306 79 30 chrX_random 6229179 6229605 -3069401 + MLT1G1 LTR MaLR 93 580 -15 289 254 0 0 chrX_random 6229605 6229672 -3069334 + LTR16C LTR ERVL 403 469 -22 3009 41 3 3 chrX_random 6231137 6231506 -3067500 + L1PA7 LINE L1 5782 6150 -4 1269 296 44 69 chrX_random 6232248 6233026 -3065980 - L1ME3 LINE L1 -21 6141 5384 592 207 0 9 chrX_random 6233026 6233142 -3065864 - FLAM_A SINE Alu -14 128 14 340 254 74 66 chrX_random 6233156 6233412 -3065594 - L1ME3 LINE L1 -758 5388 5131 1515 288 60 10 chrX_random 6233821 6234741 -3064265 - L1ME3 LINE L1 -965 5181 4143 192 40 0 0 chrX_random 6234843 6234868 -3064138 + (TG)n Simple_repeat Simple_repeat 1 25 0 5987 100 7 0 chrX_random 6234986 6235853 -3063153 + L1MA3 LINE L1 5433 6305 0 333 338 91 20 chrX_random 6236056 6236450 -3062556 - L1MC/D LINE L1 -2055 5753 5332 1914 138 34 0 chrX_random 6236632 6236930 -3062076 - AluSx SINE Alu -4 308 1 231 162 0 0 chrX_random 6237741 6237778 -3061228 - MER5B DNA MER1_type 0 178 142 * 482 201 45 37 chrX_random 6237745 6237879 -3061127 + MER5B DNA MER1_type 44 178 0 213 226 0 0 chrX_random 6240919 6240972 -3058034 + (TA)n Simple_repeat Simple_repeat 2 54 0 660 280 10 35 chrX_random 6243327 6243438 -3055568 - MER63A DNA MER1_type -1479 209 104 2011 121 67 14 chrX_random 6243438 6243794 -3055212 + THE1C LTR MaLR 1 375 0 660 280 10 35 chrX_random 6243794 6243882 -3055124 - MER63A DNA MER1_type -1584 104 15 350 294 86 31 chrX_random 6245439 6245602 -3053404 - MER5B DNA MER1_type 0 178 7 223 273 30 0 chrX_random 6246481 6246547 -3052459 + CT-rich Low_complexity Low_complexity 5 72 0 802 230 11 21 chrX_random 6246887 6247078 -3051928 - MER5A DNA MER1_type 0 189 1 1049 180 5 14 chrX_random 6247241 6247452 -3051554 + L1PA16 LINE L1 5955 6163 -3 21 0 0 0 chrX_random 6247452 6247473 -3051533 + AT_rich Low_complexity Low_complexity 1 21 0 1302 37 0 6 chrX_random 6247473 6247626 -3051380 + L1PA5 LINE L1 5992 6145 -9 189 74 0 0 chrX_random 6247626 6247653 -3051353 + (TA)n Simple_repeat Simple_repeat 2 28 0 367 260 82 7 chrX_random 6248235 6248381 -3050625 + MER103 DNA DNA 7 163 -3 265 289 22 22 chrX_random 6248738 6248918 -3050088 + (TA)n Simple_repeat Simple_repeat 1 180 0 248 94 0 0 chrX_random 6248956 6249008 -3049998 + Alu SINE Alu 253 304 0 21 0 0 0 chrX_random 6249872 6249893 -3049113 + AT_rich Low_complexity Low_complexity 1 21 0 2025 116 70 20 chrX_random 6250131 6250486 -3048520 + THE1C LTR MaLR 3 375 0 4892 165 38 42 chrX_random 6251847 6252367 -3046639 - L1MA10 LINE L1 -3 6331 5811 228 35 0 0 chrX_random 6252367 6252396 -3046610 + (TC)n Simple_repeat Simple_repeat 2 30 0 4892 165 38 42 chrX_random 6252396 6252926 -3046080 - L1MA10 LINE L1 -523 5811 5285 5449 136 13 19 chrX_random 6253007 6254000 -3045006 - L1PB3 LINE L1 -1 6153 5161 208 128 32 64 chrX_random 6254374 6254468 -3044538 + (TA)n Simple_repeat Simple_repeat 1 91 0 1205 310 53 7 chrX_random 6254742 6255158 -3043848 + LTR16A LTR ERVL 16 450 0 23 0 0 0 chrX_random 6255579 6255602 -3043404 + AT_rich Low_complexity Low_complexity 1 23 0 21 71 0 0 chrX_random 6256282 6256324 -3042682 + AT_rich Low_complexity Low_complexity 1 42 0 2219 263 35 39 chrX_random 6257077 6257827 -3041179 - MER99 DNA DNA -2 826 80 511 286 0 0 chrX_random 6257821 6257954 -3041052 - MER99 DNA DNA -691 137 5 * 580 116 24 2 chrX_random 6260725 6260827 -3038179 - L1ME LINE L1 -497 5673 5569 3568 75 18 14 chrX_random 6260827 6261320 -3037686 + L1PA13 LINE L1 5663 6158 -5 2058 128 10 7 chrX_random 6261322 6261618 -3037388 + AluSx SINE Alu 1 297 -15 1520 268 108 62 chrX_random 6262051 6262521 -3036485 - HAL1 LINE L1 -1078 1429 982 1740 189 3 3 chrX_random 6262521 6262833 -3036173 - AluJb SINE Alu 0 312 1 1520 268 108 62 chrX_random 6262833 6263503 -3035503 - HAL1 LINE L1 -1525 982 237 301 286 104 52 chrX_random 6263597 6263751 -3035255 - HAL1 LINE L1 -2336 171 10 459 318 91 15 chrX_random 6264998 6265196 -3033810 - MIR SINE MIR -37 225 13 23 0 0 0 chrX_random 6266047 6266070 -3032936 + AT_rich Low_complexity Low_complexity 1 23 0 294 171 26 34 chrX_random 6268669 6268786 -3030220 + CT-rich Low_complexity Low_complexity 6 121 0 466 291 127 86 chrX_random 6268812 6268966 -3030040 - MLT1L LTR MaLR -204 411 265 1237 209 0 95 chrX_random 6268966 6269122 -3029884 - AluJo SINE Alu -14 288 119 339 25 0 0 chrX_random 6269122 6269162 -3029844 + (TG)n Simple_repeat Simple_repeat 2 41 0 1237 209 0 95 chrX_random 6269162 6269179 -3029827 - AluJo SINE Alu -183 119 102 2203 99 7 3 chrX_random 6269179 6269473 -3029533 - AluSq SINE Alu -17 296 2 1237 209 0 95 chrX_random 6269473 6269614 -3029392 - AluJo SINE Alu -200 102 3 466 291 127 86 chrX_random 6269614 6269854 -3029152 - MLT1L LTR MaLR -350 265 1 360 331 72 7 chrX_random 6270181 6270320 -3028686 - MER5A DNA MER1_type -1 188 41 366 349 11 5 chrX_random 6271461 6271650 -3027356 + Charlie8 DNA MER1_type 74 263 -2154 2769 173 2 31 chrX_random 6271901 6272380 -3026626 + MLT2B2 LTR ERVL 1 465 -50 3543 144 7 5 chrX_random 6272398 6272975 -3026031 - HSMAR2 DNA Mariner -121 1181 604 754 168 0 8 chrX_random 6272975 6273106 -3025900 - AluSc SINE Alu -11 298 169 3563 155 3 7 chrX_random 6273106 6273711 -3025295 - HSMAR2 DNA Mariner -694 608 6 260 241 0 0 chrX_random 6273793 6273851 -3025155 - MLT2B2 LTR ERVL 0 414 357 186 133 0 0 chrX_random 6273851 6273881 -3025125 + (TGGA)n Simple_repeat Simple_repeat 2 31 0 1154 240 106 38 chrX_random 6273902 6274326 -3024680 - MLT2B2 LTR ERVL -38 456 18 276 273 13 13 chrX_random 6274377 6274454 -3024552 + MIR SINE MIR 186 262 0 374 167 0 33 chrX_random 6275480 6275570 -3023436 + (CATATA)n Simple_repeat Simple_repeat 4 90 0 231 333 70 9 chrX_random 6275683 6275797 -3023209 + MIR SINE MIR 71 191 -71 21 36 0 0 chrX_random 6275799 6275827 -3023179 + AT_rich Low_complexity Low_complexity 1 28 0 312 308 60 13 chrX_random 6275850 6275983 -3023023 - MIR SINE MIR -64 144 3 937 228 35 22 chrX_random 6276956 6277184 -3021822 + L1MA6 LINE L1 281 511 -7054 * 1043 80 0 0 chrX_random 6277162 6277312 -3021694 + L1M1 LINE L1 2974 3123 -4442 321 220 0 0 chrX_random 6277307 6277366 -3021640 + L1MA6 LINE L1 495 553 -7012 * 8727 171 35 14 chrX_random 6277431 6280881 -3018125 + L1MA6 LINE L1 2003 5525 -2040 7210 119 84 0 chrX_random 6280904 6282250 -3016756 - L1PA4 LINE L1 0 6155 4670 5114 176 51 49 chrX_random 6282248 6283256 -3015750 + L1MA6 LINE L1 5505 6510 -1209 * 2315 69 20 0 chrX_random 6283256 6283561 -3015445 + AluY SINE Alu 1 311 0 5114 176 51 49 chrX_random 6283561 6284764 -3014242 + L1MA6 LINE L1 6510 7711 -8 451 285 38 19 chrX_random 6285730 6285888 -3013118 + MIR SINE MIR 90 250 -12 198 310 52 0 chrX_random 6285933 6285991 -3013015 + MIR SINE MIR 64 124 -84 1028 17 0 0 chrX_random 6286000 6286119 -3012887 + L1PA5 LINE L1 6030 6148 -6 929 260 25 70 chrX_random 6286131 6286489 -3012517 - L1M4b LINE L1 -5481 1378 1037 3180 135 9 86 chrX_random 6286554 6286665 -3012341 - L1M LINE L1 -745 5401 5283 1106 136 0 6 chrX_random 6286665 6286841 -3012165 - L1MA2 LINE L1 -7 6297 6123 3180 135 9 86 chrX_random 6286841 6286901 -3012105 - L1M LINE L1 -863 5283 5220 3219 101 11 0 chrX_random 6286901 6287368 -3011638 - L1MA2 LINE L1 -4 6300 5829 3180 135 9 86 chrX_random 6287368 6287937 -3011069 - L1M LINE L1 -926 5220 4729 2715 50 6 0 chrX_random 6288040 6288382 -3010624 - L1P LINE L1 -1160 4986 4643 * 6381 171 17 10 chrX_random 6288376 6289820 -3009186 + L1M1 LINE L1 4104 5563 -739 1425 101 28 0 chrX_random 6289820 6290027 -3008979 + L1MA1 LINE L1 6080 6302 0 29 47 0 0 chrX_random 6290035 6290078 -3008928 + AT_rich Low_complexity Low_complexity 1 43 0 30 103 0 0 chrX_random 6290519 6290626 -3008380 + AT_rich Low_complexity Low_complexity 1 107 0 24 53 0 0 chrX_random 6291227 6291265 -3007741 + AT_rich Low_complexity Low_complexity 1 38 0 272 341 59 0 chrX_random 6291740 6291875 -3007131 - MIR SINE MIR -41 221 79 232 295 26 0 chrX_random 6292017 6292095 -3006911 + (TAGA)n Simple_repeat Simple_repeat 3 82 0 2200 138 5 19 chrX_random 6292099 6292477 -3006529 + THE1C LTR MaLR 3 375 0 27 0 0 0 chrX_random 6293058 6293085 -3005921 + AT_rich Low_complexity Low_complexity 1 27 0 35 0 0 0 chrX_random 6293305 6293340 -3005666 + AT_rich Low_complexity Low_complexity 1 35 0 22 70 0 0 chrX_random 6294587 6294630 -3004376 + AT_rich Low_complexity Low_complexity 1 43 0 346 319 127 19 chrX_random 6295927 6296140 -3002866 - MIR SINE MIR -26 236 1 2678 106 30 2 chrX_random 6296628 6297032 -3001974 + L1PB1 LINE L1 5732 6146 -5 1442 251 71 3 chrX_random 6297313 6297897 -3001109 + MER69 DNA AcHobo 3 697 -1829 1151 229 155 5 chrX_random 6297901 6298281 -3000725 + MER69 DNA AcHobo 1451 1887 -639 2283 82 0 0 chrX_random 6298546 6298857 -3000149 - AluSc SINE Alu 0 311 1 13643 142 42 3 chrX_random 6299251 6301577 -2997429 - Tigger1 DNA MER2_type -2 2416 1 1931 131 3 3 chrX_random 6302891 6303173 -2995833 + AluSx SINE Alu 1 282 -30 23 0 0 0 chrX_random 6303503 6303526 -2995480 + AT_rich Low_complexity Low_complexity 1 23 0 258 339 51 15 chrX_random 6304319 6304514 -2994492 - L1M4 LINE L1 -1938 4208 4007 1925 123 49 0 chrX_random 6305157 6305442 -2993564 + AluSx SINE Alu 1 299 -13 4107 162 24 12 chrX_random 6306585 6307393 -2991613 - L1MA6 LINE L1 0 6300 5484 1376 111 14 0 chrX_random 6307464 6307672 -2991334 - L1PA10 LINE L1 -11 6157 5947 1913 81 0 0 chrX_random 6307672 6307919 -2991087 + L1PA10 LINE L1 5697 5943 -225 10622 171 36 13 chrX_random 6307935 6310467 -2988539 - L1MA6 LINE L1 -746 5400 2889 189 344 10 52 chrX_random 6311339 6311435 -2987571 + L2 LINE L2 2958 3049 -223 1378 197 123 3 chrX_random 6312961 6313261 -2985745 + MER2 DNA MER2_type 10 345 0 23 54 0 0 chrX_random 6315938 6315975 -2983031 + AT_rich Low_complexity Low_complexity 1 37 0 26 30 0 0 chrX_random 6316415 6316448 -2982558 + AT_rich Low_complexity Low_complexity 1 33 0 707 71 9 18 chrX_random 6316450 6316562 -2982444 - L1PA14 LINE L1 0 6161 6051 376 342 20 79 chrX_random 6316855 6317209 -2981797 - MLT1I LTR MaLR -17 392 60 22 56 0 0 chrX_random 6317215 6317251 -2981755 + AT_rich Low_complexity Low_complexity 1 36 0 642 304 45 62 chrX_random 6317701 6318053 -2980953 + MLT1H LTR MaLR 1 346 -203 227 139 0 0 chrX_random 6318057 6318093 -2980913 + MLT1H LTR MaLR 490 525 -30 25 0 0 0 chrX_random 6318159 6318184 -2980822 + AT_rich Low_complexity Low_complexity 1 25 0 1295 193 105 16 chrX_random 6319114 6319419 -2979587 - MER2 DNA MER2_type -1 344 13 2089 96 0 28 chrX_random 6319765 6320056 -2978950 - AluSg1 SINE Alu -26 283 1 1875 132 11 0 chrX_random 6320778 6321051 -2977955 + AluSx SINE Alu 1 276 -36 590 308 56 83 chrX_random 6321412 6321650 -2977356 + L1ME3A LINE L1 5695 5915 -251 898 149 17 11 chrX_random 6321650 6321824 -2977182 - L1MB4 LINE L1 -1 6179 6005 590 308 56 83 chrX_random 6321824 6322065 -2976941 + L1ME3A LINE L1 5915 6161 -5 1907 120 77 34 chrX_random 6322232 6322581 -2976425 + THE1B LTR MaLR 1 364 0 9909 115 4 0 chrX_random 6322581 6323973 -2975033 + THE1B-int LTR MaLR 1 1397 -183 3122 116 7 2 chrX_random 6324073 6324523 -2974483 + THE1B-int LTR MaLR 1129 1580 0 1388 139 58 42 chrX_random 6324523 6324782 -2974224 + THE1B LTR MaLR 1 263 -101 488 281 66 40 chrX_random 6324923 6325151 -2973855 - MLT1H LTR MaLR -261 288 55 603 248 97 41 chrX_random 6325196 6325217 -2973789 - L1ME1 LINE L1 -4 6162 6144 1656 148 14 40 chrX_random 6325217 6325514 -2973492 - AluSx SINE Alu -1 311 23 603 248 97 41 chrX_random 6325514 6325811 -2973195 - L1ME1 LINE L1 -22 6144 5826 528 285 6 17 chrX_random 6325819 6325898 -2973108 - L1ME1 LINE L1 -395 5771 5693 1171 197 44 9 chrX_random 6325898 6326126 -2972880 - MER46A DNA MER2_type 0 236 1 528 285 6 17 chrX_random 6326126 6326225 -2972781 - L1ME1 LINE L1 -473 5693 5595 244 176 22 33 chrX_random 6326301 6326392 -2972614 + CT-rich Low_complexity Low_complexity 3 92 0 868 238 37 29 chrX_random 6326421 6327096 -2971910 - L1M4 LINE L1 -2889 3755 2916 254 187 18 2 chrX_random 6327094 6327166 -2971840 - L1M4 LINE L1 -4602 1973 1483 * 581 272 8 59 chrX_random 6327260 6327514 -2971492 - L1M4 LINE L1 -6301 241 1 336 248 62 55 chrX_random 6327512 6327657 -2971349 - L1ME1 LINE L1 -944 5202 5057 * 32 57 0 0 chrX_random 6328079 6328132 -2970874 + AT_rich Low_complexity Low_complexity 1 53 0 25 51 0 0 chrX_random 6328390 6328429 -2970577 + AT_rich Low_complexity Low_complexity 1 39 0 573 322 88 4 chrX_random 6328500 6328727 -2970279 - MIR SINE MIR -15 247 2 260 274 71 9 chrX_random 6328730 6328843 -2970163 - L1ME LINE L1 -312 5809 5690 3268 122 71 2 chrX_random 6329113 6329646 -2969360 - L1MA1 LINE L1 0 6302 5733 2512 129 78 5 chrX_random 6329641 6329962 -2969044 + L1M1 LINE L1 5162 5532 -770 * 959 79 0 22 chrX_random 6329962 6330101 -2968905 + L1PA7 LINE L1 6019 6154 0 2512 129 78 5 chrX_random 6330101 6330292 -2968714 + L1M1 LINE L1 5532 5708 -594 10604 43 1 0 chrX_random 6330316 6331846 -2967160 - L1PA5 LINE L1 -540 5614 4084 4345 44 13 2 chrX_random 6331846 6332393 -2966613 + L1PA5 LINE L1 5599 6151 -3 453 170 9 19 chrX_random 6333079 6333185 -2965821 + L1MA3 LINE L1 6201 6305 0 2470 48 0 0 chrX_random 6333190 6333482 -2965524 - AluY SINE Alu -19 292 1 217 240 0 0 chrX_random 6333886 6333936 -2965070 + CT-rich Low_complexity Low_complexity 2 51 0 1192 320 28 25 chrX_random 6333939 6334744 -2964262 - L2 LINE L2 -8 3305 2500 4762 76 0 0 chrX_random 6335283 6335913 -2963093 - L1PA7 LINE L1 -1688 4458 3829 * 6197 69 20 9 chrX_random 6335911 6337241 -2961765 + L1PA7 LINE L1 4485 5826 -328 1465 145 130 15 chrX_random 6337241 6337503 -2961503 - AluSc SINE Alu -11 298 7 680 199 65 11 chrX_random 6337552 6337738 -2961268 - L1 LINE L1 -3544 3664 3469 * 8333 207 100 42 chrX_random 6337736 6337977 -2961029 - L1 LINE L1 -3950 3259 3033 207 0 0 0 chrX_random 6337977 6338000 -2961006 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 8333 207 100 42 chrX_random 6338000 6338863 -2960143 - L1 LINE L1 -4176 3033 2221 4501 116 14 10 chrX_random 6338863 6339587 -2959419 - L1MA2 LINE L1 0 6304 5578 8333 207 100 42 chrX_random 6339587 6341661 -2957345 - L1 LINE L1 -4988 2221 1 2127 88 7 30 chrX_random 6342040 6342337 -2956669 + AluSx SINE Alu 1 290 -22 207 279 88 0 chrX_random 6342710 6342778 -2956228 - MIR SINE MIR -12 250 177 26 50 0 0 chrX_random 6343383 6343423 -2955583 + AT_rich Low_complexity Low_complexity 1 40 0 246 83 0 0 chrX_random 6343622 6343658 -2955348 - L1MA2 LINE L1 -304 6000 5965 1607 242 40 9 chrX_random 6344112 6344558 -2954448 - L1MB8 LINE L1 -16 6162 5703 448 253 73 13 chrX_random 6345545 6345695 -2953311 - MER103 DNA DNA -7 159 1 621 313 36 0 chrX_random 6346050 6346245 -2952761 + MIR SINE MIR 43 244 -18 200 111 0 28 chrX_random 6346372 6346408 -2952598 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 255 353 92 0 chrX_random 6347281 6347358 -2951648 - MIR SINE MIR -25 237 169 2185 90 0 35 chrX_random 6347358 6347668 -2951338 + AluY SINE Alu 1 299 -12 255 353 92 0 chrX_random 6347668 6347763 -2951243 - MIR SINE MIR -93 169 49 806 139 0 7 chrX_random 6347838 6347975 -2951031 + L1MA3 LINE L1 6170 6305 0 207 271 0 0 chrX_random 6348055 6348103 -2950903 + MIR SINE MIR 104 151 -111 524 272 83 0 chrX_random 6348259 6348439 -2950567 - MIR SINE MIR 0 262 68 529 189 8 8 chrX_random 6348852 6348979 -2950027 - L1MA7 LINE L1 0 6291 6165 180 350 62 12 chrX_random 6349085 6349165 -2949841 + L2 LINE L2 2723 2806 -508 240 250 37 96 chrX_random 6349414 6349550 -2949456 - L1MC4 LINE L1 -1301 6741 6614 197 132 26 0 chrX_random 6349552 6349590 -2949416 + (TA)n Simple_repeat Simple_repeat 2 40 0 3920 194 102 8 chrX_random 6349600 6350560 -2948446 - L1MC3 LINE L1 -25 7760 6711 23 0 0 0 chrX_random 6351180 6351203 -2947803 + AT_rich Low_complexity Low_complexity 1 23 0 587 309 63 36 chrX_random 6351671 6351972 -2947034 - MLT1H LTR MaLR -215 334 26 6341 148 25 10 chrX_random 6353853 6355591 -2943415 - L1MA2 LINE L1 0 6304 4540 812 218 75 92 chrX_random 6356779 6357150 -2941856 - MLT1A1 LTR MaLR 0 365 1 321 286 20 10 chrX_random 6357217 6357315 -2941691 + MER5A DNA MER1_type 9 107 -82 354 255 47 87 chrX_random 6358343 6358492 -2940514 + HAL1b LINE L1 344 486 -862 865 305 136 9 chrX_random 6359451 6359669 -2939337 + LTR33 LTR ERVL 1 190 -331 1615 198 0 16 chrX_random 6359669 6359977 -2939029 - AluJo SINE Alu -9 303 1 865 305 136 9 chrX_random 6359977 6360220 -2938786 + LTR33 LTR ERVL 190 521 0 594 76 0 0 chrX_random 6361489 6361568 -2937438 + MADE1 DNA Mariner 1 79 -1 229 264 150 94 chrX_random 6362506 6362813 -2936193 + L2 LINE L2 2988 3311 -2 1953 245 87 15 chrX_random 6363012 6363613 -2935393 + LTR48B LTR ERV1 1 644 0 7778 180 108 28 chrX_random 6363898 6365521 -2933485 + MER52A LTR ERV1 2 1755 0 526 154 34 17 chrX_random 6365572 6365689 -2933317 - L1MA9 LINE L1 -35 6277 6159 660 293 57 4 chrX_random 6366125 6366371 -2932635 - MIR SINE MIR 0 262 4 242 298 8 8 chrX_random 6366714 6366845 -2932161 + L1M4 LINE L1 3853 3983 -2163 282 279 106 34 chrX_random 6366888 6366970 -2932036 + L1M4 LINE L1 4070 4145 -2001 183 42 0 0 chrX_random 6366970 6366994 -2932012 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 282 279 106 34 chrX_random 6366994 6367148 -2931858 + L1M4 LINE L1 4145 4323 -1823 4930 223 78 63 chrX_random 6367152 6368718 -2930288 + L1M4 LINE L1 2 1543 -5103 2583 105 40 54 chrX_random 6368718 6369165 -2929841 + L1PA11 LINE L1 5734 6174 0 4930 223 78 63 chrX_random 6369165 6369417 -2929589 + L1M4 LINE L1 1543 1790 -4856 2332 57 0 0 chrX_random 6369417 6369721 -2929285 - AluY SINE Alu 0 304 1 4930 223 78 63 chrX_random 6369721 6369947 -2929059 + L1M4 LINE L1 1790 2082 -4564 428 298 12 6 chrX_random 6369965 6370126 -2928880 + L1M4 LINE L1 4224 4385 -2259 342 167 61 0 chrX_random 6370129 6370195 -2928811 + MSTD-int LTR MaLR 1665 1734 -1 1947 167 39 21 chrX_random 6370195 6370584 -2928422 + MSTD LTR MaLR 1 396 0 3752 193 22 41 chrX_random 6370584 6371413 -2927593 + L1MB7 LINE L1 5284 6096 -88 4128 194 17 81 chrX_random 6371413 6372257 -2926749 + MER6 DNA MER2_type 1 783 -82 2100 138 0 0 chrX_random 6372257 6372555 -2926451 - AluSx SINE Alu -14 298 1 4128 194 17 81 chrX_random 6372555 6372634 -2926372 + MER6 DNA MER2_type 783 865 0 3752 193 22 41 chrX_random 6372634 6372701 -2926305 + L1MB7 LINE L1 6096 6163 -21 23 54 0 0 chrX_random 6372703 6372740 -2926266 + AT_rich Low_complexity Low_complexity 1 37 0 1219 195 27 0 chrX_random 6372781 6373037 -2925969 + L1ME LINE L1 3196 3458 -3186 580 294 71 71 chrX_random 6373023 6373129 -2925877 + L1ME LINE L1 4872 4977 -1667 * 2163 52 42 38 chrX_random 6373129 6373417 -2925589 + AluY SINE Alu 16 304 -7 580 294 71 71 chrX_random 6373417 6373638 -2925368 + L1ME LINE L1 4977 5197 -1447 1822 187 32 12 chrX_random 6373638 6374050 -2924956 - L1MA9 LINE L1 0 6312 5893 580 294 71 71 chrX_random 6374050 6374631 -2924375 + L1ME LINE L1 5196 5781 -863 670 304 72 25 chrX_random 6374639 6375001 -2924005 + L1ME LINE L1 5808 6186 -482 257 343 129 13 chrX_random 6375176 6375363 -2923643 - L2 LINE L2 -313 3000 2794 1241 84 35 10 chrX_random 6375496 6375699 -2923307 + L1MA3 LINE L1 6098 6305 0 23 86 0 0 chrX_random 6375970 6376028 -2922978 + AT_rich Low_complexity Low_complexity 1 58 0 2142 97 0 21 chrX_random 6376682 6377031 -2921975 - AluSx SINE Alu 0 343 1 22 35 0 0 chrX_random 6377453 6377482 -2921524 + AT_rich Low_complexity Low_complexity 1 29 0 1629 122 22 4 chrX_random 6378125 6378395 -2920611 - L1PA13 LINE L1 -1 6162 5888 25 51 0 0 chrX_random 6378760 6378799 -2920207 + AT_rich Low_complexity Low_complexity 1 39 0 2334 97 3 0 chrX_random 6379594 6379902 -2919104 - AluY SINE Alu -2 309 1 199 243 203 0 chrX_random 6379908 6379982 -2919024 - MIR3 SINE MIR -15 193 105 4240 111 6 5 chrX_random 6380051 6380691 -2918315 - L1PA13 LINE L1 -14 6149 5509 216 0 0 0 chrX_random 6380699 6380723 -2918283 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 285 311 66 0 chrX_random 6383646 6383752 -2915254 - L2 LINE L2 0 3313 3201 616 258 11 62 chrX_random 6383793 6383971 -2915035 + MER20 DNA MER1_type 51 219 0 227 378 40 32 chrX_random 6385368 6385617 -2913389 - L3 LINE CR1 -38 1539 1289 22 56 0 0 chrX_random 6385890 6385926 -2913080 + AT_rich Low_complexity Low_complexity 1 36 0 22 88 0 0 chrX_random 6389068 6389125 -2909881 + AT_rich Low_complexity Low_complexity 1 57 0 950 49 42 56 chrX_random 6389407 6389551 -2909455 - L1PA7 LINE L1 0 6154 6013 429 198 0 22 chrX_random 6390117 6390208 -2908798 + L1M3e LINE L1 9 97 -6933 649 197 0 16 chrX_random 6390213 6390338 -2908668 - MER6B DNA MER2_type -144 132 20 807 326 86 60 chrX_random 6390371 6391193 -2907813 + L1M1 LINE L1 174 1017 -6548 2481 231 60 29 chrX_random 6391305 6392611 -2906395 + L1M1 LINE L1 2924 4271 -3294 3390 251 54 63 chrX_random 6392632 6395080 -2903926 + L1PA15 LINE L1 2 2398 -4399 280 99 11 44 chrX_random 6395081 6395172 -2903834 + HERV17 LTR ERV1 776 863 -7763 842 50 0 0 chrX_random 6395178 6395277 -2903729 + AluY SINE Alu 1 99 -212 12687 221 38 23 chrX_random 6395321 6399144 -2899862 + L1PA15 LINE L1 2393 6281 -535 2132 115 56 34 chrX_random 6399144 6399500 -2899506 + THE1B LTR MaLR 1 364 0 12687 221 38 23 chrX_random 6399500 6400012 -2898994 + L1PA15 LINE L1 6281 6784 -32 4329 195 70 9 chrX_random 6400069 6400756 -2898250 + L1M1 LINE L1 4260 5042 -2523 1149 255 17 0 chrX_random 6400756 6400991 -2898015 - MER8 DNA MER2_type 0 239 1 4329 195 70 9 chrX_random 6400991 6401412 -2897594 + L1M1 LINE L1 5042 5436 -2129 6105 109 20 36 chrX_random 6401455 6402526 -2896480 - L1PA11 LINE L1 -2 6172 5104 5770 28 2 0 chrX_random 6402626 6403658 -2895348 - L1P2 LINE L1 -429 5726 4693 479 227 11 0 chrX_random 6603658 6603746 -2695260 + Tigger2 DNA MER2_type 2619 2707 -11 7416 143 125 2 chrX_random 6603757 6605026 -2693980 + Tigger1 DNA MER2_type 993 2418 0 189 171 0 0 chrX_random 6605797 6605832 -2693174 + CT-rich Low_complexity Low_complexity 2 36 0 191 336 52 127 chrX_random 6605953 6606316 -2692690 - L2 LINE L2 -18 3254 2919 821 258 96 46 chrX_random 6606346 6606900 -2692106 + MLT1G LTR MaLR 1 548 -7 322 300 110 0 chrX_random 6606979 6607079 -2691927 + L2 LINE L2 3143 3253 -19 205 337 83 26 chrX_random 6607128 6607321 -2691685 - L2 LINE L2 -444 2870 2667 21 36 0 0 chrX_random 6607422 6607450 -2691556 + AT_rich Low_complexity Low_complexity 1 28 0 1693 146 45 51 chrX_random 6608151 6608358 -2690648 - MLT1A1 LTR MaLR 0 365 159 2132 121 0 3 chrX_random 6608358 6608647 -2690359 - AluSx SINE Alu -24 288 1 1693 146 45 51 chrX_random 6608647 6608775 -2690231 - MLT1A1 LTR MaLR -206 159 32 1196 275 79 5 chrX_random 6608966 6609373 -2689633 - L1MCc LINE L1 -5947 476 40 2707 133 7 30 chrX_random 6609604 6610040 -2688966 + MSTB LTR MaLR 1 426 0 420 205 0 12 chrX_random 6610195 6610278 -2688728 - L2 LINE L2 -5 3308 3227 2055 97 7 10 chrX_random 6610470 6610760 -2688246 - AluSq SINE Alu -24 289 1 481 174 0 0 chrX_random 6611096 6611182 -2687824 + L1MA4A LINE L1 6193 6278 -25 572 280 93 5 chrX_random 6611277 6611509 -2687497 - MER110A LTR ERV1 -15 476 220 572 232 84 13 chrX_random 6611504 6611659 -2687347 - MER110A LTR ERV1 -251 217 52 929 163 16 126 chrX_random 6611659 6611905 -2687101 + MER20 DNA MER1_type 1 219 0 1088 194 25 10 chrX_random 6611919 6612120 -2686886 - MER58A DNA MER1_type -19 205 2 233 81 27 0 chrX_random 6612128 6612165 -2686841 - MER110A LTR ERV1 -430 38 1 218 321 150 0 chrX_random 6612604 6612744 -2686262 + L2 LINE L2 3099 3259 -54 855 282 8 8 chrX_random 6612792 6613047 -2685959 - MIR SINE MIR -4 258 4 2133 122 141 5 chrX_random 6613480 6613857 -2685149 + MSTA LTR MaLR 1 428 0 273 29 0 0 chrX_random 6614441 6614475 -2684531 + (GA)n Simple_repeat Simple_repeat 1 34 0 29 0 0 0 chrX_random 6614770 6614799 -2684207 + AT_rich Low_complexity Low_complexity 1 29 0 250 289 0 0 chrX_random 6615115 6615205 -2683801 + (TA)n Simple_repeat Simple_repeat 1 90 0 222 333 23 11 chrX_random 6616153 6616240 -2682766 - L2 LINE L2 -49 3223 3136 2284 95 3 0 chrX_random 6618146 6618440 -2680566 - AluSp SINE Alu -18 295 1 14933 152 18 15 chrX_random 6618929 6623591 -2675415 - L1MA3 LINE L1 -1 7723 3044 2018 133 0 29 chrX_random 6623591 6623900 -2675106 - AluSx SINE Alu -12 300 1 14933 152 18 15 chrX_random 6623900 6624293 -2674713 - L1MA3 LINE L1 -4680 3044 2654 196 364 20 40 chrX_random 6624301 6624452 -2674554 + MIR SINE MIR 38 185 -77 735 137 114 163 chrX_random 6625872 6626099 -2672907 + MER20 DNA MER1_type 2 217 -2 297 237 13 0 chrX_random 6626425 6626501 -2672505 - MER116 DNA Mariner 0 80 4 1784 103 0 16 chrX_random 6626817 6627060 -2671946 + AluSx SINE Alu 61 299 -13 274 260 0 26 chrX_random 6627318 6627395 -2671611 - MLT2E LTR ERVL -524 104 30 1214 195 65 19 chrX_random 6628120 6628428 -2670578 - MER5C DNA MER1_type 0 324 3 429 282 100 33 chrX_random 6628428 6628666 -2670340 - MLT1J2 LTR MaLR -14 406 168 546 103 0 0 chrX_random 6628666 6628744 -2670262 - MADE1 DNA Mariner 0 80 3 429 282 100 33 chrX_random 6628744 6628844 -2670162 - MLT1J2 LTR MaLR -252 168 76 1955 143 3 16 chrX_random 6629003 6629311 -2669695 + AluSx SINE Alu 1 304 -8 2144 60 0 0 chrX_random 6629962 6630227 -2668779 - AluY SINE Alu -12 299 35 22 0 0 0 chrX_random 6630627 6630649 -2668357 + AT_rich Low_complexity Low_complexity 1 22 0 1388 275 106 29 chrX_random 6630900 6631860 -2667146 + L1MCc LINE L1 1260 2516 -4606 1164 331 55 2 chrX_random 6631870 6632287 -2666719 + L1M2 LINE L1 12 450 -6399 308 352 31 47 chrX_random 6632624 6632752 -2666254 + L1M2 LINE L1 662 787 -6062 332 335 91 61 chrX_random 6632768 6632998 -2666008 + L1M2 LINE L1 548 784 -6065 263 368 0 0 chrX_random 6633156 6633243 -2665763 + L1M2 LINE L1 1070 1156 -5693 * 4848 213 62 36 chrX_random 6633236 6633672 -2665334 + L1M2 LINE L1 2593 3016 -3832 2519 51 0 19 chrX_random 6633672 6633986 -2665020 + AluY SINE Alu 1 308 -3 4848 213 62 36 chrX_random 6633986 6634072 -2664934 + L1M2 LINE L1 3016 3098 -3750 189 0 0 0 chrX_random 6634072 6634093 -2664913 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 4848 213 62 36 chrX_random 6634093 6634217 -2664789 + L1M2 LINE L1 3098 3217 -3631 2426 58 0 39 chrX_random 6634217 6634529 -2664477 + AluY SINE Alu 2 301 -10 4848 213 62 36 chrX_random 6634529 6635548 -2663458 + L1M2 LINE L1 3217 3588 -3260 2316 104 0 3 chrX_random 6635548 6635855 -2663151 + AluSc SINE Alu 3 308 -1 4848 213 62 36 chrX_random 6635855 6636485 -2662521 + L1M2 LINE L1 3588 4200 -2648 481 264 45 34 chrX_random 6636507 6636685 -2662321 + L1ME2 LINE L1 5937 6116 -48 534 82 44 59 chrX_random 6636714 6637020 -2661986 + (TTTAA)n Simple_repeat Simple_repeat 1 301 0 1459 163 4 39 chrX_random 6637235 6637493 -2661513 + AluJo SINE Alu 39 287 -25 741 135 0 0 chrX_random 6637691 6637802 -2661204 + AluJb SINE Alu 178 288 -24 22 0 0 0 chrX_random 6637812 6637834 -2661172 + AT_rich Low_complexity Low_complexity 1 22 0 4880 83 0 8 chrX_random 6637874 6638525 -2660481 - THE1A-int LTR MaLR -934 646 1 2751 84 0 0 chrX_random 6638525 6638880 -2660126 - THE1A LTR MaLR 0 355 1 433 249 55 55 chrX_random 6639245 6639410 -2659596 - MIR3 SINE MIR -1 207 43 216 342 17 17 chrX_random 6639597 6639717 -2659289 + CT-rich Low_complexity Low_complexity 1 120 0 914 272 85 39 chrX_random 6640208 6640513 -2658493 - MLT1G1 LTR MaLR -11 584 266 288 198 57 75 chrX_random 6640475 6640581 -2658425 + LTR33A LTR ERVL 364 467 -56 * 449 292 25 12 chrX_random 6640672 6640833 -2658173 - MLT1G1 LTR MaLR -404 163 1 633 243 67 70 chrX_random 6640853 6641278 -2657728 + LTR33A LTR ERVL 1 457 -66 2223 112 3 0 chrX_random 6641317 6641620 -2657386 - AluSq SINE Alu -9 304 1 5573 212 20 11 chrX_random 6643977 6646166 -2652840 - L1MC1 LINE L1 -6 6327 4121 653 238 6 0 chrX_random 6646183 6646351 -2652655 - L1M4 LINE L1 -1047 5099 4931 279 306 5 0 chrX_random 6646379 6646460 -2652546 - L1MC1 LINE L1 -2037 4109 4025 3658 88 8 9 chrX_random 6646482 6647015 -2651991 - L1MA2 LINE L1 0 6304 5773 7063 142 9 22 chrX_random 6647071 6647127 -2651879 - L1MB3 LINE L1 -347 7255 7200 2855 128 2 2 chrX_random 6647127 6647564 -2651442 - L1PB3 LINE L1 -1 6153 5717 7063 142 9 22 chrX_random 6647564 6648348 -2650658 - L1MB3 LINE L1 -402 7200 6407 2602 51 0 16 chrX_random 6648348 6648664 -2650342 - AluY SINE Alu 0 311 1 7063 142 9 22 chrX_random 6648664 6649023 -2649983 - L1MB3 LINE L1 -1195 6407 6045 2315 140 79 27 chrX_random 6649023 6649430 -2649576 - MSTA LTR MaLR 0 428 1 7063 142 9 22 chrX_random 6649430 6650151 -2648855 - L1MB3 LINE L1 -1557 6045 5381 2693 104 30 11 chrX_random 6650142 6650582 -2648424 - L1MB3 LINE L1 -3955 3610 3163 * 5326 105 12 69 chrX_random 6650578 6651509 -2647497 + L1PA16 LINE L1 5288 6165 -1 2027 108 18 7 chrX_random 6651515 6651839 -2647167 + AluSx SINE Alu 1 327 0 9382 174 110 33 chrX_random 6651857 6652503 -2646503 - L1MCa LINE L1 -3898 2528 1933 1142 146 18 79 chrX_random 6652503 6652783 -2646223 - L1MA10 LINE L1 -3 6331 6069 9382 174 110 33 chrX_random 6652783 6653778 -2645228 - L1MCa LINE L1 -4493 1933 1016 2200 126 0 0 chrX_random 6653778 6654088 -2644918 + AluSx SINE Alu 3 312 0 9382 174 110 33 chrX_random 6654088 6654739 -2644267 - L1MCa LINE L1 -5410 1016 55 2470 195 11 4 chrX_random 6654903 6655426 -2643580 - L1MB3 LINE L1 -240 5943 5417 320 268 44 60 chrX_random 6655624 6655802 -2643204 + MIR SINE MIR 38 211 -51 309 284 0 37 chrX_random 6656802 6656911 -2642095 - L1MC4a LINE L1 -1878 5930 5826 363 305 152 10 chrX_random 6656927 6657124 -2641882 - MIR SINE MIR -30 232 8 29 70 0 0 chrX_random 6657164 6657221 -2641785 + AT_rich Low_complexity Low_complexity 1 57 0 4027 117 45 2 chrX_random 6657387 6658004 -2641002 + LTR9B LTR ERV1 1 644 0 1772 158 78 0 chrX_random 6658022 6658344 -2640662 + MER7A DNA MER2_type 1 345 -1 189 147 0 0 chrX_random 6658629 6658663 -2640343 + (A)n Simple_repeat Simple_repeat 1 34 0 286 281 18 26 chrX_random 6659386 6659500 -2639506 + CT-rich Low_complexity Low_complexity 3 115 0 1743 218 85 53 chrX_random 6659501 6660157 -2638849 - MER67C LTR ERV1 0 710 34 229 167 0 0 chrX_random 6660180 6660222 -2638784 - L2 LINE L2 -9 3304 3263 2170 119 38 43 chrX_random 6660423 6660843 -2638163 - L1MA8 LINE L1 -4 6287 5870 1794 146 3 3 chrX_random 6660846 6661162 -2637844 + L1MA8 LINE L1 5543 5858 -433 505 215 221 7 chrX_random 6661460 6661609 -2637397 + MER5A DNA MER1_type 9 189 0 826 139 11 22 chrX_random 6661851 6661923 -2637083 + GA-rich Low_complexity Low_complexity 3 74 -106 1942 141 50 7 chrX_random 6661923 6662044 -2636962 + AluSx SINE Alu 1 115 -197 267 54 0 0 chrX_random 6662044 6662081 -2636925 + (TAAAA)n Simple_repeat Simple_repeat 2 38 0 1942 141 50 7 chrX_random 6662081 6662258 -2636748 + AluSx SINE Alu 115 312 0 826 139 11 22 chrX_random 6662258 6662365 -2636641 + GA-rich Low_complexity Low_complexity 74 180 0 372 368 76 25 chrX_random 6662470 6662826 -2636180 + L1M4 LINE L1 3385 3758 -2388 327 308 74 11 chrX_random 6662852 6663216 -2635790 + L1M4 LINE L1 3802 4188 -1958 467 274 163 20 chrX_random 6663396 6663794 -2635212 + L1M4 LINE L1 4320 4774 -1372 2344 81 0 16 chrX_random 6664092 6664400 -2634606 + AluSc SINE Alu 1 303 -6 2379 67 0 0 chrX_random 6664485 6664795 -2634211 - AluSp SINE Alu 0 310 1 230 204 204 0 chrX_random 6665059 6665113 -2633893 - L2 LINE L2 -25 3288 3224 27 0 0 0 chrX_random 6665120 6665147 -2633859 + AT_rich Low_complexity Low_complexity 1 27 0 1462 281 83 49 chrX_random 6665367 6665831 -2633175 - L2 LINE L2 -1 3312 2865 1416 199 97 30 chrX_random 6665831 6666202 -2632804 + MSTD LTR MaLR 1 396 0 1462 281 83 49 chrX_random 6666202 6666611 -2632395 - L2 LINE L2 -448 2865 2401 225 268 171 0 chrX_random 6666614 6666696 -2632310 + MER34 LTR ERV1 1 96 -446 270 248 38 19 chrX_random 6666858 6666963 -2632043 + LTR48 LTR ERV1 379 485 -302 418 207 69 69 chrX_random 6666987 6667161 -2631845 + LTR48 LTR ERV1 614 787 0 1207 270 95 54 chrX_random 6667162 6667644 -2631362 + L2 LINE L2 2812 3313 0 706 261 34 34 chrX_random 6667749 6667987 -2631019 - HAL1 LINE L1 -2106 401 161 4205 102 8 5 chrX_random 6667987 6668585 -2630421 - MER4A LTR ERV1 0 600 1 706 261 34 34 chrX_random 6668585 6668614 -2630392 - HAL1 LINE L1 -2345 162 134 2603 78 125 5 chrX_random 6668627 6669027 -2629979 + LTR7 LTR ERV1 1 448 -2 2879 100 4 26 chrX_random 6669029 6669498 -2629508 + HERVH LTR ERV1 1 459 -7254 14398 83 12 22 chrX_random 6669552 6671778 -2627228 + HERVH LTR ERV1 793 2995 -4718 5557 92 12 6 chrX_random 6671757 6672606 -2626400 + HERVH LTR ERV1 3140 3993 -3720 * 4152 140 0 1 chrX_random 6672608 6673271 -2625735 + HERVH LTR ERV1 4488 5149 -2564 1277 120 53 0 chrX_random 6673272 6673481 -2625525 + HERVH LTR ERV1 5600 5819 -1894 2360 77 48 13 chrX_random 6673481 6673858 -2625148 + HERVH LTR ERV1 7324 7713 0 2813 66 98 5 chrX_random 6673858 6674268 -2624738 + LTR7 LTR ERV1 1 448 -2 458 284 41 26 chrX_random 6674483 6674677 -2624329 + MIR SINE MIR 66 262 0 2007 132 10 3 chrX_random 6674815 6675110 -2623896 + AluSx SINE Alu 1 297 -15 22 0 0 0 chrX_random 6675887 6675909 -2623097 + AT_rich Low_complexity Low_complexity 1 22 0 350 233 333 0 chrX_random 6676065 6676185 -2622821 - MER5A DNA MER1_type 0 189 30 2510 134 10 72 chrX_random 6676494 6676860 -2622146 - L1PA16 LINE L1 0 6166 5836 2199 89 0 0 chrX_random 6676860 6677140 -2621866 - AluSg SINE Alu -30 280 1 2510 134 10 72 chrX_random 6677140 6677258 -2621748 - L1PA16 LINE L1 -330 5836 5712 21 36 0 0 chrX_random 6677308 6677336 -2621670 + AT_rich Low_complexity Low_complexity 1 28 0 237 35 0 0 chrX_random 6678285 6678314 -2620692 - U6 snRNA snRNA -76 31 3 1505 243 51 48 chrX_random 6678384 6678414 -2620592 + L1ME3A LINE L1 5621 5649 -521 1777 150 105 12 chrX_random 6678414 6678748 -2620258 - MLT1A1 LTR MaLR 0 365 1 1505 243 51 48 chrX_random 6678748 6679264 -2619742 + L1ME3A LINE L1 5649 6169 -1 1702 222 96 49 chrX_random 6679351 6679842 -2619164 + LTR40a LTR ERVL 5 518 -1 668 311 34 17 chrX_random 6679969 6680207 -2618799 - MIR SINE MIR -3 259 18 458 241 28 47 chrX_random 6681537 6681749 -2617257 - L1ME3A LINE L1 -1 6169 5962 234 0 0 0 chrX_random 6681858 6681884 -2617122 + (TA)n Simple_repeat Simple_repeat 2 27 0 851 267 61 20 chrX_random 6681884 6682404 -2616602 - L1ME3A LINE L1 -287 5883 5185 551 211 82 49 chrX_random 6682404 6682581 -2616425 + MLT1G LTR MaLR 200 376 -195 640 223 31 26 chrX_random 6682669 6682862 -2616144 + MLT1G LTR MaLR 397 590 0 2137 121 0 3 chrX_random 6683526 6683839 -2615167 + AluSx SINE Alu 1 312 0 702 205 99 0 chrX_random 6685376 6685547 -2613459 + MER58C DNA MER1_type 3 190 -25 1098 286 78 0 chrX_random 6686133 6686517 -2612489 - L1ME LINE L1 -5644 426 13 222 150 0 0 chrX_random 6686924 6686964 -2612042 + (GA)n Simple_repeat Simple_repeat 1 40 0 14623 134 26 3 chrX_random 6687380 6689744 -2609262 + Tigger1 DNA MER2_type 1 2418 0 239 273 54 14 chrX_random 6692691 6692855 -2606151 + L2 LINE L2 3169 3291 -22 1665 114 122 11 chrX_random 6692855 6693117 -2605889 - AluSg1 SINE Alu -18 291 1 453 254 101 22 chrX_random 6693631 6693769 -2605237 + MIR SINE MIR 3 151 -111 1542 230 23 63 chrX_random 6693769 6693811 -2605195 + L1ME3A LINE L1 5607 5649 -521 5927 108 7 6 chrX_random 6693811 6694859 -2604147 + L1PB1 LINE L1 5103 6151 0 1542 230 23 63 chrX_random 6694859 6695172 -2603834 + L1ME3A LINE L1 5649 5936 -234 2248 95 3 0 chrX_random 6695172 6695482 -2603524 + AluSp SINE Alu 1 311 0 1542 230 23 63 chrX_random 6695482 6695680 -2603326 + L1ME3A LINE L1 5936 6140 -30 189 307 45 23 chrX_random 6695716 6695804 -2603202 + MIR SINE MIR 153 242 -20 1433 176 101 43 chrX_random 6697285 6697632 -2601374 + MSTB LTR MaLR 1 367 -59 568 70 0 30 chrX_random 6697632 6697732 -2601274 - L1PA13 LINE L1 0 6163 6067 1322 103 20 0 chrX_random 6697732 6697935 -2601071 + L1P4 LINE L1 5579 5785 -378 452 140 10 9 chrX_random 6697935 6698037 -2600969 + MSTB LTR MaLR 334 426 0 261 0 0 0 chrX_random 6698489 6698518 -2600488 + (TG)n Simple_repeat Simple_repeat 2 30 0 297 274 60 24 chrX_random 6699697 6699781 -2599225 - L2 LINE L2 -52 3220 3134 1818 166 151 27 chrX_random 6699847 6700257 -2598749 - MER21B LTR ERV1 -74 789 329 1643 239 37 19 chrX_random 6701401 6701882 -2597124 - L1ME3A LINE L1 -20 6150 5660 1322 13 0 0 chrX_random 6701882 6702032 -2596974 - L1PA4 LINE L1 -8 6147 5998 1643 239 37 19 chrX_random 6702032 6702043 -2596963 - L1ME3A LINE L1 -510 5660 5651 24 77 0 0 chrX_random 6702938 6702990 -2596016 + AT_rich Low_complexity Low_complexity 1 52 0 506 338 53 10 chrX_random 6703379 6703621 -2595385 - MIR SINE MIR -8 254 3 640 215 70 17 chrX_random 6703752 6703924 -2595082 - MSTC LTR MaLR 0 365 185 4118 80 26 0 chrX_random 6703948 6704488 -2594518 - MER41A LTR ERV1 0 554 1 664 183 26 34 chrX_random 6704509 6704694 -2594312 - MSTC LTR MaLR -185 180 1 246 377 53 39 chrX_random 6704928 6705340 -2593666 + L2 LINE L2 2636 3056 -216 644 267 134 14 chrX_random 6705480 6705697 -2593309 + MIR SINE MIR 19 261 -1 1486 301 105 25 chrX_random 6705950 6706549 -2592457 - MLT2F LTR ERVL 0 663 17 1230 52 0 0 chrX_random 6707332 6707487 -2591519 + L1PA5 LINE L1 6000 6154 0 23 78 0 0 chrX_random 6707510 6707561 -2591445 + AT_rich Low_complexity Low_complexity 1 51 0 322 273 74 74 chrX_random 6708394 6708650 -2590356 + MIR SINE MIR 3 258 -4 380 351 48 6 chrX_random 6708783 6708951 -2590055 + MIR SINE MIR 74 248 -14 228 386 61 25 chrX_random 6709285 6709448 -2589558 - MER5A DNA MER1_type -16 173 5 368 247 166 38 chrX_random 6709544 6709779 -2589227 + L1ME4a LINE L1 5670 5934 -187 242 293 60 15 chrX_random 6709795 6709928 -2589078 + L1ME4a LINE L1 5978 6116 -5 1901 215 19 59 chrX_random 6710004 6710530 -2588476 + MLT1D LTR MaLR 1 505 0 323 250 100 25 chrX_random 6710743 6710863 -2588143 - MLT1L LTR MaLR -235 380 252 758 234 50 37 chrX_random 6710876 6711094 -2587912 + MIR SINE MIR 14 234 -28 687 213 151 89 chrX_random 6711155 6711572 -2587434 + MLT1H LTR MaLR 107 549 0 209 276 40 40 chrX_random 6711834 6711910 -2587096 - MIR SINE MIR -114 94 19 583 273 65 8 chrX_random 6712833 6713082 -2585924 - MER90 LTR ERV1 -8 567 304 8219 169 101 32 chrX_random 6713082 6714117 -2584889 + MER52A LTR ERV1 1 1193 -562 4511 158 49 75 chrX_random 6714117 6715216 -2583790 - MER11C LTR ERVK 0 1071 1 8219 169 101 32 chrX_random 6715216 6715821 -2583185 + MER52A LTR ERV1 1193 1755 0 2332 80 3 10 chrX_random 6716102 6716401 -2582605 + AluSc SINE Alu 1 297 -12 819 242 63 5 chrX_random 6716752 6716942 -2582064 - MER58A DNA MER1_type -21 203 3 845 321 81 9 chrX_random 6717157 6717577 -2581429 + LTR16A LTR ERVL 1 450 0 333 259 94 0 chrX_random 6718199 6718284 -2580722 - L2 LINE L2 -3 3310 3218 1124 259 23 93 chrX_random 6718465 6718894 -2580112 + LTR16C LTR ERVL 80 478 -13 1015 234 28 0 chrX_random 6719374 6719592 -2579414 - MER58A DNA MER1_type 0 224 1 516 209 251 6 chrX_random 6719600 6719763 -2579243 + MER3 DNA MER1_type 1 203 -6 1833 247 65 40 chrX_random 6720667 6720832 -2578174 - L1ME3A LINE L1 -181 5989 5830 2403 76 0 10 chrX_random 6720832 6721135 -2577871 - AluY SINE Alu -11 300 1 1833 247 65 40 chrX_random 6721135 6721694 -2577312 - L1ME3A LINE L1 -340 5830 5255 22 0 0 0 chrX_random 6721699 6721721 -2577285 + AT_rich Low_complexity Low_complexity 1 22 0 30 45 0 0 chrX_random 6721795 6721839 -2577167 + AT_rich Low_complexity Low_complexity 1 44 0 1399 156 19 4 chrX_random 6722627 6722883 -2576123 + L1MB3 LINE L1 5922 6181 -2 2375 41 14 14 chrX_random 6723020 6723315 -2575691 - AluY SINE Alu -16 295 1 26 50 0 0 chrX_random 6724196 6724236 -2574770 + AT_rich Low_complexity Low_complexity 1 40 0 2144 146 71 29 chrX_random 6724237 6724647 -2574359 - MSTA LTR MaLR -1 427 1 476 215 74 57 chrX_random 6724793 6725043 -2573963 - MER115 DNA AcHobo -78 615 279 270 261 0 33 chrX_random 6726387 6726479 -2572527 + MER103 DNA DNA 64 152 -14 1174 205 0 26 chrX_random 6726609 6726838 -2572168 - MER58A DNA MER1_type -1 223 1 192 158 0 0 chrX_random 6727031 6727069 -2571937 + (CA)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chrX_random 6727185 6727206 -2571800 + AT_rich Low_complexity Low_complexity 1 21 0 34 24 0 0 chrX_random 6727309 6727350 -2571656 + AT_rich Low_complexity Low_complexity 1 41 0 189 0 0 0 chrX_random 6727980 6728001 -2571005 + (TA)n Simple_repeat Simple_repeat 1 21 0 201 229 62 94 chrX_random 6728450 6728546 -2570460 - L2 LINE L2 -3 3269 3177 2240 109 0 7 chrX_random 6729220 6729523 -2569483 - AluSq SINE Alu -12 301 1 714 266 114 23 chrX_random 6729578 6729928 -2569078 - L1ME4a LINE L1 -202 5919 5538 230 250 16 0 chrX_random 6730558 6730622 -2568384 - L2 LINE L2 -1 3271 3207 335 270 36 0 chrX_random 6730657 6730768 -2568238 - L1ME4a LINE L1 0 6121 6007 24 77 0 0 chrX_random 6731258 6731310 -2567696 + AT_rich Low_complexity Low_complexity 1 52 0 4519 124 16 3 chrX_random 6731310 6731669 -2567337 - L1PB3 LINE L1 -1 6153 5800 351 0 0 0 chrX_random 6731669 6731708 -2567298 + (TA)n Simple_repeat Simple_repeat 2 40 0 4519 124 16 3 chrX_random 6731708 6732048 -2566958 - L1PB3 LINE L1 -354 5800 5445 378 315 30 33 chrX_random 6732890 6733210 -2565796 - L1M4 LINE L1 -1983 4163 3850 594 313 59 46 chrX_random 6733546 6733853 -2565153 + MLT1I LTR MaLR 80 390 -19 2043 24 0 12 chrX_random 6734037 6734284 -2564722 + L1PA5 LINE L1 5911 6154 0 307 342 39 59 chrX_random 6736638 6737062 -2561944 + L2 LINE L2 2554 3058 -214 378 309 7 15 chrX_random 6737069 6737205 -2561801 + L2 LINE L2 3177 3311 -2 222 337 178 24 chrX_random 6737218 6737482 -2561524 - L2 LINE L2 -1216 2098 1876 895 211 0 0 chrX_random 6737482 6737634 -2561372 - FRAM SINE Alu -14 152 1 222 337 178 24 chrX_random 6737634 6737784 -2561222 - L2 LINE L2 -1438 1876 1620 516 278 8 49 chrX_random 6738249 6738452 -2560554 + MIR SINE MIR 19 212 -50 369 299 39 8 chrX_random 6738518 6738645 -2560361 + MIR SINE MIR 64 194 -68 531 246 176 0 chrX_random 6738826 6738968 -2560038 + MER5A DNA MER1_type 20 186 -3 186 176 0 0 chrX_random 6740816 6740867 -2558139 + GA-rich Low_complexity Low_complexity 3 53 0 332 329 29 0 chrX_random 6741337 6741474 -2557532 - L1ME4a LINE L1 -350 5828 5688 502 162 0 147 chrX_random 6741477 6741613 -2557393 + MER20 DNA MER1_type 1 116 -103 474 248 47 51 chrX_random 6741728 6741872 -2557134 - Charlie7 DNA MER1_type -669 1943 1799 2256 96 0 3 chrX_random 6741872 6742165 -2556841 + AluSc SINE Alu 1 292 -17 474 248 47 51 chrX_random 6742165 6742234 -2556772 - Charlie7 DNA MER1_type -813 1799 1731 324 297 58 45 chrX_random 6742775 6743172 -2555834 - L1MEd LINE L1 -3623 2506 2105 587 308 62 19 chrX_random 6743701 6744321 -2554685 - L1MEd LINE L1 -4731 1579 895 3881 263 51 29 chrX_random 6744401 6744478 -2554528 + L1MEc LINE L1 38 112 -2464 2809 186 111 31 chrX_random 6744478 6745243 -2553763 + LTR1B LTR ERV1 1 826 0 3881 263 51 29 chrX_random 6745243 6746680 -2552326 + L1MEc LINE L1 112 1638 -938 257 274 42 0 chrX_random 6747045 6747140 -2551866 - Charlie7 DNA MER1_type -1078 1534 1436 291 203 31 0 chrX_random 6747421 6747485 -2551521 - MER116 DNA Mariner -14 66 1 899 256 30 26 chrX_random 6747675 6747909 -2551097 + MIR SINE MIR 4 238 -24 1819 215 83 12 chrX_random 6748527 6749031 -2549975 - MER119 DNA MER1_type 0 583 1 1488 314 49 30 chrX_random 6749804 6750400 -2548606 - MLT2F LTR ERVL -56 607 1 322 382 42 28 chrX_random 6750430 6750499 -2548507 + L2 LINE L2 3127 3194 -78 2340 181 71 111 chrX_random 6750499 6751359 -2547647 + LTR1B LTR ERV1 1 826 0 322 382 42 28 chrX_random 6751359 6751433 -2547573 + L2 LINE L2 3194 3272 0 45 83 0 0 chrX_random 6751753 6751861 -2547145 + AT_rich Low_complexity Low_complexity 1 108 0 250 385 43 0 chrX_random 6752712 6752829 -2546177 - MIR SINE MIR -94 168 47 512 308 75 0 chrX_random 6752992 6753125 -2545881 - L2 LINE L2 -5 3267 3125 553 288 69 43 chrX_random 6753842 6754075 -2544931 + MIR SINE MIR 2 240 -22 945 290 54 32 chrX_random 6754335 6754776 -2544230 - LTR16A1 LTR ERVL 0 457 7 284 92 0 123 chrX_random 6755686 6755751 -2543255 - L1PB4 LINE L1 0 6156 6100 346 345 89 30 chrX_random 6756161 6756364 -2542642 + L2 LINE L2 3058 3272 0 216 296 37 0 chrX_random 6758089 6758143 -2540863 - MIR SINE MIR -137 71 16 2366 105 3 0 chrX_random 6758298 6758604 -2540402 + AluSq SINE Alu 1 307 -6 2518 77 151 3 chrX_random 6759019 6759409 -2539597 + LTR7 LTR ERV1 1 448 -2 22 0 0 0 chrX_random 6760341 6760363 -2538643 + AT_rich Low_complexity Low_complexity 1 22 0 180 111 0 0 chrX_random 6761479 6761506 -2537500 + (TATG)n Simple_repeat Simple_repeat 4 30 0 2640 195 26 2 chrX_random 6762223 6762725 -2536281 + MLT2B2 LTR ERVL 1 514 -1 2142 84 40 4 chrX_random 6763460 6763759 -2535247 + AluSp SINE Alu 1 309 0 291 215 0 15 chrX_random 6764241 6764306 -2534700 - HAL1 LINE L1 -1656 851 788 269 313 0 0 chrX_random 6764306 6764373 -2534633 - HAL1 LINE L1 -2179 328 262 4538 208 92 35 chrX_random 6764568 6765329 -2533677 + L1M4 LINE L1 2489 3206 -2940 405 0 0 0 chrX_random 6765329 6765374 -2533632 + (CA)n Simple_repeat Simple_repeat 2 46 0 4538 208 92 35 chrX_random 6765374 6765832 -2533174 + L1M4 LINE L1 3206 3800 -2346 2255 116 7 3 chrX_random 6765832 6766142 -2532864 + AluSx SINE Alu 1 311 -1 4538 208 92 35 chrX_random 6766142 6766331 -2532675 + L1M4 LINE L1 3800 3977 -2169 1684 165 40 3 chrX_random 6766332 6766653 -2532353 + L1MC2 LINE L1 5999 6331 -13 2406 93 0 13 chrX_random 6766653 6766965 -2532041 + AluSp SINE Alu 1 308 -5 29 0 0 0 chrX_random 6766966 6766995 -2532011 + AT_rich Low_complexity Low_complexity 1 29 0 6071 48 13 17 chrX_random 6767314 6768083 -2530923 + MER4E LTR ERV1 1 766 0 217 219 0 0 chrX_random 6768369 6768410 -2530596 + MIR SINE MIR 106 146 -116 297 151 0 0 chrX_random 6768678 6768731 -2530275 + GA-rich Low_complexity Low_complexity 4 56 0 879 189 34 48 chrX_random 6768791 6768943 -2530063 + MER3 DNA MER1_type 3 153 -56 2145 115 7 3 chrX_random 6768943 6769239 -2529767 - AluSx SINE Alu -15 297 1 879 189 34 48 chrX_random 6769239 6769292 -2529714 + MER3 DNA MER1_type 153 205 -4 233 311 129 38 chrX_random 6770014 6770146 -2528860 - MER5A DNA MER1_type -3 186 43 23 0 0 0 chrX_random 6770446 6770469 -2528537 + AT_rich Low_complexity Low_complexity 1 23 0 533 234 0 94 chrX_random 6773089 6773260 -2525746 - MER103 DNA DNA -2 164 10 2163 105 24 3 chrX_random 6773566 6773862 -2525144 - AluSq SINE Alu -11 302 1 2454 94 12 59 chrX_random 6775369 6775857 -2523149 + MER4A LTR ERV1 1 423 -241 653 121 187 60 chrX_random 6775877 6776043 -2522963 + MER4C LTR ERV1 277 463 -2 1924 75 8 11 chrX_random 6776469 6776734 -2522272 + L1PA8 LINE L1 5905 6168 -4 619 271 77 5 chrX_random 6778058 6778265 -2520741 - MIR SINE MIR -2 260 39 3479 128 17 79 chrX_random 6779274 6779917 -2519089 - LTR26 LTR ERV1 0 603 1 2416 56 0 23 chrX_random 6781741 6782047 -2516959 + AluY SINE Alu 1 299 -12 2625 118 68 5 chrX_random 6782296 6782696 -2516310 - MSTA LTR MaLR -3 425 1 2526 74 3 0 chrX_random 6785502 6785812 -2513194 + AluSp SINE Alu 1 311 -2 293 284 90 0 chrX_random 6785942 6786092 -2512914 - MIR SINE MIR -56 206 45 2364 100 0 10 chrX_random 6787377 6787688 -2511318 + AluSx SINE Alu 1 308 -4 446 268 77 0 chrX_random 6788938 6789106 -2509900 - MIR SINE MIR -30 232 52 242 170 0 0 chrX_random 6790497 6790544 -2508462 - L1MA9 LINE L1 -38 6274 6228 1256 161 210 0 chrX_random 6790546 6790789 -2508217 + Tigger3b DNA MER2_type 3 296 -935 332 87 0 0 chrX_random 6790795 6790841 -2508165 - MADE1 DNA Mariner 0 80 35 299 180 18 45 chrX_random 6790857 6790968 -2508038 + (TAA)n Simple_repeat Simple_repeat 1 108 0 1974 128 0 0 chrX_random 6790968 6791233 -2507773 - AluSx SINE Alu -28 284 20 6184 112 24 10 chrX_random 6791237 6792161 -2506845 + Tigger3b DNA MER2_type 293 1229 -2 4092 183 27 44 chrX_random 6792163 6792597 -2506409 - L1MA9 LINE L1 -83 6229 5789 1907 80 34 0 chrX_random 6792597 6792859 -2506147 - L1PA15 LINE L1 -6 6159 5889 4092 183 27 44 chrX_random 6792859 6793336 -2505670 - L1MA9 LINE L1 -523 5789 5333 2131 133 7 0 chrX_random 6794415 6794724 -2504282 + AluSx SINE Alu 1 311 -1 241 253 56 74 chrX_random 6794904 6795016 -2503990 - MIR SINE MIR -104 104 3 1538 167 7 17 chrX_random 6796175 6796463 -2502543 + AluJb SINE Alu 1 285 -27 1141 87 0 0 chrX_random 6796463 6796634 -2502372 + AluSg/x SINE Alu 132 302 0 683 199 0 88 chrX_random 6796668 6796849 -2502157 + AluSg/x SINE Alu 148 312 0 1553 170 3 17 chrX_random 6797477 6797766 -2501240 + AluJb SINE Alu 1 285 -27 1129 93 0 0 chrX_random 6797766 6797941 -2501065 + AluSg/x SINE Alu 132 306 0 22 0 0 0 chrX_random 6797946 6797968 -2501038 + AT_rich Low_complexity Low_complexity 1 22 0 327 206 61 14 chrX_random 6797968 6798066 -2500940 + AluJ/FLAM SINE Alu 1 94 -208 602 113 10 10 chrX_random 6798066 6798163 -2500843 + AluJo/FRAM SINE Alu 154 250 -62 1160 124 76 0 chrX_random 6798163 6798377 -2500629 + AluSg/x SINE Alu 85 312 0 21 0 0 0 chrX_random 6798382 6798403 -2500603 + AT_rich Low_complexity Low_complexity 1 21 0 649 210 0 88 chrX_random 6798413 6798594 -2500412 + AluSg/x SINE Alu 148 312 0 25 0 0 0 chrX_random 6799208 6799233 -2499773 + AT_rich Low_complexity Low_complexity 1 25 0 1249 63 44 0 chrX_random 6802993 6803152 -2495854 + AluYb8 SINE Alu 142 307 -11 321 306 108 6 chrX_random 6803841 6803998 -2495008 - MIR SINE MIR -50 212 40 198 0 0 0 chrX_random 6804359 6804381 -2494625 + (T)n Simple_repeat Simple_repeat 1 22 0 5125 179 30 9 chrX_random 6805445 6806632 -2492374 - L1MC1 LINE L1 0 6333 5122 497 269 56 25 chrX_random 6810539 6810699 -2488307 - MIR SINE MIR -85 177 13 2334 66 0 0 chrX_random 6812826 6813112 -2485894 + AluY SINE Alu 22 307 -4 21 36 0 0 chrX_random 6817158 6817186 -2481820 + AT_rich Low_complexity Low_complexity 1 28 0 385 336 159 5 chrX_random 6818219 6818427 -2480579 - MIR SINE MIR 0 262 23 374 299 139 25 chrX_random 6819778 6820059 -2478947 + MLT1J2 LTR MaLR 1 313 -137 4293 127 155 18 chrX_random 6820548 6821544 -2477462 - MER11B LTR ERVK 0 1236 1 272 48 24 0 chrX_random 6823883 6823925 -2475081 + (TTTTG)n Simple_repeat Simple_repeat 3 45 0 1263 253 43 63 chrX_random 6824049 6824718 -2474288 - L1MEc LINE L1 -4419 1977 1322 535 183 0 139 chrX_random 6824724 6824932 -2474074 - L1MEc LINE L1 -6187 209 31 21 0 0 0 chrX_random 6825944 6825965 -2473041 + AT_rich Low_complexity Low_complexity 1 21 0 911 207 101 13 chrX_random 6826028 6826336 -2472670 + MER33 DNA MER1_type 1 324 0 252 296 83 68 chrX_random 6826436 6826568 -2472438 + MIR3 SINE MIR 63 196 -12 288 330 0 0 chrX_random 6826805 6826923 -2472083 + L1ME LINE L1 5584 5701 -420 252 0 0 0 chrX_random 6827217 6827245 -2471761 + (TAGA)n Simple_repeat Simple_repeat 4 31 0 243 263 136 8 chrX_random 6827287 6827405 -2471601 + MLT1H LTR MaLR 23 155 -394 900 208 113 30 chrX_random 6828014 6828245 -2470761 + MIR SINE MIR 13 262 0 2295 113 0 0 chrX_random 6829308 6829608 -2469398 + AluSg SINE Alu 1 300 -10 252 246 0 0 chrX_random 6829836 6829897 -2469109 + L1ME LINE L1 5589 5649 -472 232 244 46 53 chrX_random 6830285 6830416 -2468590 - MLT1J1 LTR MaLR -316 130 1 296 391 81 30 chrX_random 6830416 6830812 -2468194 + L2 LINE L2 2017 2432 -882 1801 165 17 22 chrX_random 6830846 6831203 -2467803 + MLT2C2 LTR ERVL 19 373 -91 273 39 39 19 chrX_random 6831204 6831256 -2467750 + (TA)n Simple_repeat Simple_repeat 2 54 0 201 175 25 0 chrX_random 6831323 6831363 -2467643 + (CATATA)n Simple_repeat Simple_repeat 1 41 0 342 0 0 0 chrX_random 6831369 6831407 -2467599 + (TG)n Simple_repeat Simple_repeat 1 38 0 25 51 0 0 chrX_random 6832284 6832323 -2466683 + AT_rich Low_complexity Low_complexity 1 39 0 473 266 58 62 chrX_random 6832445 6832519 -2466487 - L1M4 LINE L1 -1334 4812 4739 2203 96 20 0 chrX_random 6832519 6832811 -2466195 + AluSx SINE Alu 1 298 -14 930 113 0 0 chrX_random 6832811 6832953 -2466053 + (TA)n Simple_repeat Simple_repeat 2 143 0 473 266 58 62 chrX_random 6832953 6833118 -2465888 - L1M4 LINE L1 -1405 4741 4573 313 328 81 44 chrX_random 6833153 6833473 -2465533 + L2 LINE L2 1921 2252 -1062 222 318 40 28 chrX_random 6833607 6833783 -2465223 + L2 LINE L2 2307 2484 -830 244 172 37 108 chrX_random 6833822 6833937 -2465069 - MLT1G LTR MaLR 0 574 462 388 364 59 4 chrX_random 6834290 6834543 -2464463 + L2 LINE L2 2550 2816 -498 182 286 32 32 chrX_random 6834656 6834719 -2464287 + L2 LINE L2 3249 3311 -2 186 295 248 9 chrX_random 6835228 6835333 -2463673 - L2 LINE L2 -1 3271 3142 512 275 58 79 chrX_random 6835371 6835749 -2463257 + MLT1I LTR MaLR 40 409 0 322 346 103 34 chrX_random 6836308 6836629 -2462377 + L2 LINE L2 2332 2674 -640 892 264 37 0 chrX_random 6836735 6836951 -2462055 - MER58A DNA MER1_type 0 224 1 538 359 41 44 chrX_random 6836980 6837345 -2461661 + L2 LINE L2 2909 3272 0 736 300 77 46 chrX_random 6837844 6838301 -2460705 - MLT2F LTR ERVL -4 659 189 2291 88 22 0 chrX_random 6838323 6838642 -2460364 + THE1B LTR MaLR 1 326 -38 225 173 0 120 chrX_random 6838658 6838733 -2460273 - L1M2 LINE L1 -811 5489 5424 824 128 21 0 chrX_random 6838735 6838876 -2460130 + L1MA6 LINE L1 5798 5941 -359 261 81 0 0 chrX_random 6838896 6838933 -2460073 + THE1B LTR MaLR 328 364 0 619 178 27 41 chrX_random 6838949 6839095 -2459911 - MLT2F LTR ERVL -519 144 1 1520 124 8 8 chrX_random 6839382 6839647 -2459359 - L1M2 LINE L1 -609 5691 5427 1318 121 0 5 chrX_random 6839647 6839844 -2459162 + L1PA10 LINE L1 5961 6157 -11 2996 118 39 0 chrX_random 6839942 6840426 -2458580 + L1MA6 LINE L1 5798 6300 0 36 23 0 0 chrX_random 6842471 6842514 -2456492 + AT_rich Low_complexity Low_complexity 1 43 0 285 306 78 42 chrX_random 6843289 6843482 -2455524 + MIR SINE MIR 20 219 -43 1747 187 0 0 chrX_random 6843538 6843821 -2455185 + AluJb SINE Alu 16 298 -14 21 57 0 0 chrX_random 6843883 6843918 -2455088 + AT_rich Low_complexity Low_complexity 1 35 0 29 60 0 0 chrX_random 6843946 6843996 -2455010 + AT_rich Low_complexity Low_complexity 1 50 0 468 235 13 60 chrX_random 6843999 6844148 -2454858 - MIR SINE MIR -58 204 63 14238 133 19 16 chrX_random 6844785 6846164 -2452842 + Tigger1 DNA MER2_type 1 1375 -1043 312 27 0 0 chrX_random 6846164 6846201 -2452805 + (TTA)n Simple_repeat Simple_repeat 3 39 0 5609 32 1 1 chrX_random 6846201 6846864 -2452142 - L1PA5 LINE L1 -18 6136 5474 14238 133 19 16 chrX_random 6846864 6847894 -2451112 + Tigger1 DNA MER2_type 1374 2418 0 478 288 44 63 chrX_random 6849452 6849723 -2449283 - MLT1J1 LTR MaLR -174 272 7 21 0 0 0 chrX_random 6850182 6850203 -2448803 + AT_rich Low_complexity Low_complexity 1 21 0 764 242 153 21 chrX_random 6851654 6852147 -2446859 + MLT1G LTR MaLR 1 559 -8 903 265 8 41 chrX_random 6852551 6852819 -2446187 - MIR SINE MIR -2 260 2 434 274 88 29 chrX_random 6852874 6853038 -2445968 + MIR SINE MIR 3 173 -62 1486 136 16 0 chrX_random 6855494 6855745 -2443261 - L1MB1 LINE L1 -239 5929 5675 1982 136 16 48 chrX_random 6858958 6859334 -2439672 + THE1B LTR MaLR 1 364 0 12102 85 3 4 chrX_random 6859334 6860916 -2438090 + THE1B-int LTR MaLR 1 1580 0 1879 145 21 46 chrX_random 6860916 6861289 -2437717 + THE1B LTR MaLR 1 364 0 263 289 5 67 chrX_random 6861773 6861967 -2437039 - LTR41 LTR ERVL -591 182 1 333 305 161 6 chrX_random 6863376 6863550 -2435456 + MIR SINE MIR 41 241 -21 2125 110 4 0 chrX_random 6863668 6863982 -2435024 - AluSx SINE Alu 0 315 1 2239 122 27 19 chrX_random 6864162 6864532 -2434474 - THE1C LTR MaLR 0 375 3 295 93 0 0 chrX_random 6865012 6865055 -2433951 + Charlie4 DNA MER1_type 119 161 -1800 1898 258 27 20 chrX_random 6865055 6865613 -2433393 + MER68 LTR ERV1 1 562 0 418 300 25 67 chrX_random 6865614 6865670 -2433336 + MER68-int LTR ERV1 3 48 -4143 636 236 44 25 chrX_random 6865670 6865873 -2433133 + HERVL68 LTR ERVL 1 207 -2830 476 229 17 57 chrX_random 6865988 6866163 -2432843 + HERVL68 LTR ERVL 363 530 -2507 714 190 23 0 chrX_random 6866168 6866342 -2432664 + GA-rich Low_complexity Low_complexity 3 180 0 8032 180 81 48 chrX_random 6866342 6866383 -2432623 + HERVL68 LTR ERVL 495 533 -2504 837 99 0 0 chrX_random 6866383 6866504 -2432502 + (GGGA)n Simple_repeat Simple_repeat 4 124 0 8032 180 81 48 chrX_random 6866504 6868605 -2430401 + HERVL68 LTR ERVL 533 2712 -325 216 0 0 0 chrX_random 6868605 6868629 -2430377 + (TG)n Simple_repeat Simple_repeat 1 24 0 8032 180 81 48 chrX_random 6868629 6868660 -2430346 + HERVL68 LTR ERVL 2712 2741 -296 310 203 40 27 chrX_random 6868682 6868756 -2430250 + Charlie4 DNA MER1_type 1887 1961 0 286 280 11 11 chrX_random 6868965 6869058 -2429948 + Tigger8 DNA MER2_type 504 596 -70 22 56 0 0 chrX_random 6869610 6869646 -2429360 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chrX_random 6871530 6871560 -2427446 + AT_rich Low_complexity Low_complexity 1 30 0 351 0 0 0 chrX_random 6871720 6871759 -2427247 + (TG)n Simple_repeat Simple_repeat 2 40 0 344 275 0 11 chrX_random 6871931 6872022 -2426984 + MER5A DNA MER1_type 40 129 -60 194 261 22 0 chrX_random 6872623 6872669 -2426337 + MIR3 SINE MIR 144 190 -18 306 298 111 111 chrX_random 6873460 6874263 -2424743 + L1M2 LINE L1 543 1345 -5504 371 216 208 8 chrX_random 6875012 6875137 -2423869 + MER5A DNA MER1_type 40 189 0 215 269 90 26 chrX_random 6875177 6875255 -2423751 - L2 LINE L2 -16 3297 3215 1800 133 36 7 chrX_random 6875328 6875636 -2423370 - L1PA15 LINE L1 0 6165 5849 919 47 0 16 chrX_random 6875900 6876027 -2422979 + (TTCC)n Simple_repeat Simple_repeat 4 128 0 201 175 0 0 chrX_random 6876027 6876067 -2422939 + CT-rich Low_complexity Low_complexity 2 41 0 674 295 57 26 chrX_random 6876167 6876259 -2422747 + MIR SINE MIR 6 94 -168 1661 197 172 27 chrX_random 6876259 6876700 -2422306 - MLT1D LTR MaLR 0 505 1 674 295 57 26 chrX_random 6876700 6876834 -2422172 + MIR SINE MIR 94 239 -23 512 239 61 43 chrX_random 6877302 6877465 -2421541 + L2 LINE L2 3137 3302 -11 257 345 126 0 chrX_random 6877641 6877771 -2421235 + MIR SINE MIR 2 149 -62 2082 117 0 26 chrX_random 6879655 6879984 -2419022 - AluSx SINE Alu 0 312 2 229 250 0 0 chrX_random 6880019 6880067 -2418939 + L2 LINE L2 3261 3308 -5 633 50 0 0 chrX_random 6880236 6880316 -2418690 + MADE1 DNA Mariner 1 80 0 225 0 0 0 chrX_random 6880391 6880416 -2418590 + (TA)n Simple_repeat Simple_repeat 1 25 0 2207 132 8 8 chrX_random 6880470 6880842 -2418164 - L1MA4A LINE L1 0 6303 5932 318 283 102 18 chrX_random 6881211 6881377 -2417629 - LTR16C LTR ERVL -13 478 299 232 250 18 0 chrX_random 6882108 6882164 -2416842 - MLT1K LTR MaLR -110 478 422 938 289 143 24 chrX_random 6882193 6882950 -2416056 + L2 LINE L2 2455 3292 -21 216 0 0 0 chrX_random 6883181 6883205 -2415801 + (A)n Simple_repeat Simple_repeat 1 24 0 288 0 0 0 chrX_random 6883481 6883513 -2415493 + (TG)n Simple_repeat Simple_repeat 2 33 0 645 251 92 0 chrX_random 6884390 6884553 -2414453 + MER5A DNA MER1_type 11 188 -1 417 215 122 105 chrX_random 6884564 6884736 -2414270 - MER5B DNA MER1_type -3 175 1 222 37 0 0 chrX_random 6884773 6884800 -2414206 + (TAA)n Simple_repeat Simple_repeat 2 28 0 322 330 71 33 chrX_random 6885231 6885413 -2413593 + L2 LINE L2 2574 2762 -552 189 361 0 0 chrX_random 6885738 6885821 -2413185 + L2 LINE L2 2887 2969 -303 1008 275 73 3 chrX_random 6886144 6886431 -2412575 - MLT1I LTR MaLR -3 406 100 1821 94 8 0 chrX_random 6886918 6887152 -2411854 - AluSq SINE Alu -15 298 63 23354 26 3 0 chrX_random 6888137 6891078 -2407928 - L1PA3 LINE L1 -789 5357 2410 6680 42 0 4 chrX_random 6891078 6891885 -2407121 + L1PA3 LINE L1 5349 6155 0 207 316 34 60 chrX_random 6892050 6892167 -2406839 - L2 LINE L2 -341 2973 2860 822 285 54 47 chrX_random 6892886 6893352 -2405654 - MLT1J LTR MaLR -42 469 1 2131 106 0 17 chrX_random 6893560 6893852 -2405154 - AluSq SINE Alu -26 287 1 4093 182 15 25 chrX_random 6893980 6895128 -2403878 - L1MB7 LINE L1 -30 6154 5016 2602 227 61 21 chrX_random 6895129 6895223 -2403783 - L1MB7 LINE L1 -1735 4411 4322 2053 118 0 46 chrX_random 6895223 6895529 -2403477 + AluSx SINE Alu 1 292 -20 2602 227 61 21 chrX_random 6895529 6896186 -2402820 - L1MB7 LINE L1 -1824 4322 3630 348 205 3 0 chrX_random 6896186 6896273 -2402733 + L1P5 LINE L1 5709 5795 -356 345 291 40 45 chrX_random 6897223 6897422 -2401584 - MER90 LTR ERV1 -14 600 403 324 288 32 0 chrX_random 6897596 6897721 -2401285 - LTR65 LTR ERV1 -531 138 10 355 239 64 28 chrX_random 6898113 6898222 -2400784 + L2 LINE L2 3197 3309 -4 364 250 0 22 chrX_random 6898870 6898962 -2400044 - L1MC4 LINE L1 -1339 6703 6614 319 275 0 22 chrX_random 6898896 6898987 -2400019 + L1MC4 LINE L1 6614 6702 -1340 * 328 292 0 0 chrX_random 6899016 6899105 -2399901 + L1MC4 LINE L1 6614 6702 -1340 * 352 289 0 0 chrX_random 6899026 6899116 -2399890 - L1MC4 LINE L1 -1339 6703 6614 356 242 0 22 chrX_random 6899124 6899215 -2399791 - L1MC4 LINE L1 -1339 6703 6615 320 311 0 0 chrX_random 6899160 6899250 -2399756 + L1MC4 LINE L1 6614 6703 -1339 * 377 267 0 0 chrX_random 6899244 6899334 -2399672 - L1MC4 LINE L1 -1339 6703 6614 305 240 0 62 chrX_random 6899278 6899374 -2399632 + L1MC4 LINE L1 6614 6703 -1339 * 318 247 11 54 chrX_random 6899346 6899439 -2399567 - L1MC4 LINE L1 -1339 6703 6615 21 0 0 0 chrX_random 6899499 6899520 -2399486 + AT_rich Low_complexity Low_complexity 1 21 0 798 309 85 14 chrX_random 6899789 6900155 -2398851 - LTR16C LTR ERVL -1 490 99 736 250 0 11 chrX_random 6900848 6901024 -2397982 + MER5B DNA MER1_type 4 177 -1 519 353 161 16 chrX_random 6901880 6901966 -2397040 + L2 LINE L2 1701 1773 -1541 5949 102 13 19 chrX_random 6901966 6902663 -2396343 + L1PA16 LINE L1 4649 5348 -818 2419 97 0 0 chrX_random 6902663 6902971 -2396035 - AluY SINE Alu -3 308 1 5949 102 13 19 chrX_random 6902971 6903794 -2395212 + L1PA16 LINE L1 5348 6165 -1 519 353 161 16 chrX_random 6903794 6904271 -2394735 + L2 LINE L2 1773 2346 -968 197 309 25 25 chrX_random 6904280 6904361 -2394645 + L2 LINE L2 1850 1930 -1384 751 291 19 60 chrX_random 6905427 6905692 -2393314 + MIR SINE MIR 3 256 -6 226 352 16 16 chrX_random 6905891 6906019 -2392987 - LTR16C LTR ERVL 0 491 364 2547 254 81 33 chrX_random 6906094 6907037 -2391969 + Zaphod DNA AcHobo 1 988 -3043 1162 175 27 11 chrX_random 6907037 6907300 -2391706 + MER33 DNA MER1_type 1 267 -57 787 213 78 30 chrX_random 6907323 6907591 -2391415 + Zaphod DNA AcHobo 3600 3880 -151 5271 205 50 21 chrX_random 6908754 6910699 -2388307 + L1MA4 LINE L1 1022 2911 -3783 2640 29 0 3 chrX_random 6910699 6911006 -2388000 + AluY SINE Alu 1 306 -5 5271 205 50 21 chrX_random 6911006 6911878 -2387128 + L1MA4 LINE L1 2911 6570 -124 2299 56 3 14 chrX_random 6911882 6912169 -2386837 + AluSc SINE Alu 1 284 -25 284 341 8 8 chrX_random 6912387 6912516 -2386490 - L1ME LINE L1 -503 5618 5490 1178 182 31 23 chrX_random 6912860 6913118 -2385888 + L1MA9 LINE L1 6053 6312 0 714 150 8 0 chrX_random 6913137 6913264 -2385742 + L1MA4 LINE L1 6165 6292 -8 2322 206 48 15 chrX_random 6913283 6913610 -2385396 + L1ME1 LINE L1 2740 3055 -3091 1847 171 0 19 chrX_random 6913610 6913925 -2385081 + AluJo SINE Alu 1 309 -3 2322 206 48 15 chrX_random 6913925 6914319 -2384687 + L1ME1 LINE L1 3055 3485 -2661 * 3293 233 31 19 chrX_random 6914308 6915522 -2383484 + L1ME1 LINE L1 4419 5664 -502 1027 212 18 26 chrX_random 6915522 6915748 -2383258 - MER58A DNA MER1_type 0 224 1 3293 233 31 19 chrX_random 6915748 6916207 -2382799 + L1ME1 LINE L1 5664 6116 -50 12106 152 7 11 chrX_random 6916309 6919258 -2379748 - L1PA13 LINE L1 0 6814 3881 6936 183 12 8 chrX_random 6919294 6920620 -2378386 - L1PA13 LINE L1 -3452 3345 2014 2027 175 20 25 chrX_random 6920912 6921311 -2377695 - L1PA13 LINE L1 -4790 1997 1601 237 171 0 0 chrX_random 6921322 6921363 -2377643 - MER94 DNA DNA -93 41 1 180 265 59 15 chrX_random 6921373 6921441 -2377565 - MIR SINE MIR -79 183 113 2194 274 50 96 chrX_random 6921594 6922864 -2376142 - L2 LINE L2 -248 3065 1853 911 224 51 5 chrX_random 6923984 6924180 -2374826 + MER63A DNA MER1_type 1 205 -5 354 253 32 11 chrX_random 6924494 6924589 -2374417 - MLT1J2 LTR MaLR -352 98 2 22 56 0 0 chrX_random 6925177 6925213 -2373793 + AT_rich Low_complexity Low_complexity 1 36 0 183 286 0 71 chrX_random 6925363 6925447 -2373559 + L3b LINE CR1 1109 1186 -397 1803 114 0 0 chrX_random 6925962 6926199 -2372807 + AluSx SINE Alu 1 237 -75 1019 157 0 69 chrX_random 6926263 6926479 -2372527 - MER3 DNA MER1_type 0 209 9 1081 278 25 80 chrX_random 6927172 6927423 -2371583 + L2 LINE L2 2633 2896 -417 2185 111 7 0 chrX_random 6927423 6927712 -2371294 - AluSc SINE Alu -18 291 1 1081 278 25 80 chrX_random 6927712 6928172 -2370834 + L2 LINE L2 2896 3313 0 455 364 6 0 chrX_random 6928257 6928430 -2370576 - MIR3 SINE MIR -1 207 34 364 257 29 36 chrX_random 6928431 6928571 -2370435 + MARNA DNA Mariner 337 475 -111 188 288 17 0 chrX_random 6930218 6930277 -2368729 - MIR SINE MIR -23 239 180 216 0 0 0 chrX_random 6930709 6930733 -2368273 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 270 308 0 39 chrX_random 6930845 6930923 -2368083 - L2 LINE L2 -2 3311 3237 1027 258 79 41 chrX_random 6931138 6931530 -2367476 + MLT1J2 LTR MaLR 44 450 0 14285 134 28 14 chrX_random 6931754 6934136 -2364870 - Tigger1 DNA MER2_type 0 2418 3 634 333 110 48 chrX_random 6934259 6934967 -2364039 + L2 LINE L2 2152 2903 -411 700 172 55 16 chrX_random 6934987 6935115 -2363891 - FLAM_C SINE Alu 0 133 1 307 350 29 7 chrX_random 6935289 6935429 -2363577 + L2 LINE L2 3167 3309 -4 262 264 160 57 chrX_random 6935638 6935744 -2363262 - MIR SINE MIR -118 144 28 222 118 0 0 chrX_random 6937286 6937320 -2361686 + (T)n Simple_repeat Simple_repeat 1 34 0 558 313 30 0 chrX_random 6937512 6937678 -2361328 + MER91A DNA MER1_type 1 171 -25 246 345 12 36 chrX_random 6937702 6937786 -2361220 + MER91B DNA MER1_type 109 190 0 294 228 0 0 chrX_random 6937873 6937930 -2361076 - LTR16A1 LTR ERVL 0 457 401 551 239 0 18 chrX_random 6937930 6938043 -2360963 + MER81 DNA DNA 1 111 -3 1085 262 65 52 chrX_random 6938046 6938447 -2360559 - LTR16A1 LTR ERVL -51 406 1 462 179 0 12 chrX_random 6938796 6938880 -2360126 - MER81 DNA DNA -1 113 31 479 255 120 38 chrX_random 6939869 6940053 -2358953 + MIR SINE MIR 8 206 -56 251 353 144 0 chrX_random 6940202 6940322 -2358684 + MIR SINE MIR 1 136 -72 * 696 294 136 30 chrX_random 6940310 6940640 -2358366 + L2 LINE L2 2949 3313 0 256 254 16 0 chrX_random 6940653 6940716 -2358290 + MIR3 SINE MIR 135 198 -10 847 297 81 30 chrX_random 6941780 6942177 -2356829 + MLT1J2 LTR MaLR 34 450 0 2793 232 32 7 chrX_random 6942837 6943765 -2355241 - L1MCa LINE L1 -3259 3167 2220 2607 89 5 22 chrX_random 6943765 6944134 -2354872 + THE1C LTR MaLR 1 363 -12 10204 103 31 35 chrX_random 6944144 6945730 -2353276 + THE1C-int LTR MaLR 1 1580 0 2639 95 8 16 chrX_random 6945730 6946108 -2352898 + THE1C LTR MaLR 1 375 0 735 233 91 89 chrX_random 6946108 6946587 -2352419 - L1MCa LINE L1 -4204 2222 1739 5260 85 5 11 chrX_random 6946587 6947325 -2351681 - L1PB1 LINE L1 0 6151 5418 735 233 91 89 chrX_random 6947325 6947634 -2351372 - L1MCa LINE L1 -4687 1739 1432 357 184 0 92 chrX_random 6947636 6947723 -2351283 + MLT1C LTR MaLR 1 79 -388 805 172 97 27 chrX_random 6947812 6947998 -2351008 - L1PB4 LINE L1 -2 6154 5956 1486 198 129 16 chrX_random 6947998 6948361 -2350645 + MLT1C LTR MaLR 64 467 0 2013 198 46 2 chrX_random 6948361 6948836 -2350170 - L1MCa LINE L1 -4992 1434 939 864 159 26 0 chrX_random 6948836 6948987 -2350019 - MLT1B LTR MaLR -2 388 234 2111 95 0 7 chrX_random 6949425 6949738 -2349268 + AluSx SINE Alu 1 311 0 2148 242 56 39 chrX_random 6949934 6950625 -2348381 + L1ME3A LINE L1 5455 6157 -13 1878 232 15 30 chrX_random 6950885 6951350 -2347656 + MLT1C LTR MaLR 7 464 -3 264 308 172 18 chrX_random 6952282 6952503 -2346503 + L2 LINE L2 2592 2846 -468 251 288 93 50 chrX_random 6952706 6952845 -2346161 + L2 LINE L2 3169 3313 0 1555 270 91 15 chrX_random 6952975 6953524 -2345482 - MLT1E LTR MaLR 0 593 3 2470 267 57 37 chrX_random 6953810 6954218 -2344788 - L2 LINE L2 0 3313 2915 2462 86 0 0 chrX_random 6954218 6954522 -2344484 - AluSg SINE Alu -6 304 1 2470 267 57 37 chrX_random 6954522 6955248 -2343758 - L2 LINE L2 -398 2915 2147 251 247 90 11 chrX_random 6955567 6955656 -2343350 - MER5A DNA MER1_type -68 121 26 2174 96 28 3 chrX_random 6955969 6956260 -2342746 + AluSx SINE Alu 1 298 -14 356 333 17 17 chrX_random 6956360 6956480 -2342526 + MLT1I LTR MaLR 99 218 -191 309 200 62 12 chrX_random 6956597 6956677 -2342329 + MLT1I LTR MaLR 318 401 -8 191 244 22 0 chrX_random 6957227 6957272 -2341734 + L2 LINE L2 3218 3263 -9 271 206 16 16 chrX_random 6958041 6958104 -2340902 + MER103 DNA DNA 24 86 -80 1174 171 41 26 chrX_random 6958119 6958388 -2340618 - ORSL DNA AcHobo -1 274 2 367 364 83 16 chrX_random 6958630 6958943 -2340063 - L2 LINE L2 -962 2352 2019 826 296 58 14 chrX_random 6958996 6959361 -2339645 + L1ME4a LINE L1 5509 5889 -232 1773 184 13 72 chrX_random 6959428 6959901 -2339105 + MER65A LTR ERV1 1 445 0 302 256 53 45 chrX_random 6959910 6960021 -2338985 + L1ME4a LINE L1 5985 6099 -22 1366 188 80 7 chrX_random 6960021 6960297 -2338709 - AluJo SINE Alu -16 296 1 302 256 53 45 chrX_random 6960297 6960318 -2338688 + L1ME4a LINE L1 6099 6118 -3 181 373 130 16 chrX_random 6960327 6960896 -2338110 - L2 LINE L2 -1313 2001 1368 279 309 223 24 chrX_random 6961071 6961447 -2337559 - L2 LINE L2 -2425 889 439 974 164 0 0 chrX_random 6962082 6962228 -2336778 + FRAM SINE Alu 1 146 -30 558 284 70 59 chrX_random 6962293 6962719 -2336287 + LTR67 LTR ERVL 123 553 -4 1839 215 64 35 chrX_random 6962769 6963317 -2335689 + L1ME3A LINE L1 5599 6162 -8 253 229 152 19 chrX_random 6963334 6963439 -2335567 - MIR3 SINE MIR -81 127 9 * 281 281 74 30 chrX_random 6963420 6963555 -2335451 - MIR SINE MIR -67 195 55 331 250 0 33 chrX_random 6963666 6963758 -2335248 + L1MC4a LINE L1 5840 5928 -1880 1089 168 45 5 chrX_random 6964202 6964404 -2334602 + L1PB4 LINE L1 5935 6144 -12 2536 246 83 24 chrX_random 6965544 6965604 -2333402 - L1ME3 LINE L1 -12 6150 6095 351 0 0 0 chrX_random 6965604 6965643 -2333363 + (CA)n Simple_repeat Simple_repeat 2 40 0 2536 246 83 24 chrX_random 6965643 6966372 -2332634 - L1ME3 LINE L1 -67 6095 5314 486 289 67 49 chrX_random 7016743 7017596 -2281410 + L1MC/D LINE L1 4736 5604 -755 530 242 8 0 chrX_random 7017893 7018025 -2280981 + LTR16A1 LTR ERVL 322 454 -3 536 246 207 43 chrX_random 7018361 7018641 -2280365 + Charlie2 DNA MER1_type 6 331 -2531 * 1726 234 39 12 chrX_random 7018631 7019154 -2279852 + Charlie2 DNA MER1_type 1856 2398 -464 2495 56 0 3 chrX_random 7019154 7019456 -2279550 + AluY SINE Alu 1 301 -10 1726 234 39 12 chrX_random 7019456 7019521 -2279485 + Charlie2 DNA MER1_type 2398 2460 -402 467 123 0 0 chrX_random 7019564 7019637 -2279369 + L1MA8 LINE L1 6162 6234 -57 * 5102 146 49 41 chrX_random 7019622 7019688 -2279318 + L1MA4 LINE L1 4931 4995 -1305 1334 160 67 67 chrX_random 7019688 7020000 -2279006 + AluJo SINE Alu 1 312 0 5102 146 49 41 chrX_random 7020000 7021297 -2277709 + L1MA4 LINE L1 4995 6295 -5 1242 64 0 0 chrX_random 7021318 7021474 -2277532 - AluSq SINE Alu -1 312 157 756 99 0 0 chrX_random 7021476 7021577 -2277429 - AluSq SINE Alu -211 101 1 477 160 0 34 chrX_random 7021599 7021718 -2277288 + GA-rich Low_complexity Low_complexity 2 116 0 334 211 31 93 chrX_random 7021733 7021894 -2277112 + Charlie2 DNA MER1_type 2550 2700 -162 950 183 17 6 chrX_random 7022605 7022785 -2276221 - MIR SINE MIR -1 261 80 6907 54 52 0 chrX_random 7023457 7024415 -2274591 - L1PA7 LINE L1 0 6154 5183 2088 101 52 0 chrX_random 7024415 7024702 -2274304 - AluSx SINE Alu -9 303 2 422 139 0 13 chrX_random 7024704 7024783 -2274223 + L1MA9 LINE L1 6191 6268 -44 7330 104 7 4 chrX_random 7024783 7026007 -2272999 + HSMAR1 DNA Mariner 1 1280 -7 4779 175 56 34 chrX_random 7026038 7027508 -2271498 + L1MC1 LINE L1 4832 6332 -1 387 300 8 0 chrX_random 7027513 7027643 -2271363 + L1ME LINE L1 5317 5447 -717 7606 27 1 1 chrX_random 7027653 7029253 -2269753 - L1PA3 LINE L1 0 6155 4556 4358 21 0 0 chrX_random 7029253 7029785 -2269221 + L1P LINE L1 3829 4360 -1786 339 274 129 5 chrX_random 7029778 7029979 -2269027 + L1ME LINE L1 5431 5656 -510 * 294 87 0 0 chrX_random 7029986 7030032 -2268974 + (TCTCTG)n Simple_repeat Simple_repeat 3 48 0 * 447 19 0 0 chrX_random 7030031 7030083 -2268923 + (CA)n Simple_repeat Simple_repeat 1 52 0 2380 79 3 3 chrX_random 7031058 7031361 -2267645 + AluSp SINE Alu 1 303 -10 2516 46 3 10 chrX_random 7031362 7031667 -2267339 + AluY SINE Alu 2 304 -7 1298 194 51 6 chrX_random 7031894 7032249 -2266757 - MER114 LTR ERV -53 595 225 676 186 0 16 chrX_random 7032268 7032397 -2266609 + FLAM_A SINE Alu 9 135 -7 1045 177 41 64 chrX_random 7032519 7032863 -2266143 + L1MC5 LINE L1 7249 7584 -377 458 235 126 82 chrX_random 7033032 7033398 -2265608 - L1MC5 LINE L1 -424 7537 7156 34 65 0 0 chrX_random 7033422 7033484 -2265522 + AT_rich Low_complexity Low_complexity 1 62 0 655 216 8 0 chrX_random 7033494 7033619 -2265387 - FLAM_A SINE Alu -6 127 2 21 0 0 0 chrX_random 7034347 7034368 -2264638 + AT_rich Low_complexity Low_complexity 1 21 0 441 358 38 8 chrX_random 7034612 7034659 -2264347 + L3 LINE CR1 229 273 -1304 1554 93 56 0 chrX_random 7034659 7034874 -2264132 - MER30 DNA MER1_type 0 230 4 441 358 38 8 chrX_random 7034874 7035066 -2263940 + L3 LINE CR1 273 475 -1102 1492 229 71 55 chrX_random 7035066 7035559 -2263447 - MLT2B1 LTR ERVL -2 518 18 319 302 132 8 chrX_random 7035578 7035707 -2263299 + L3 LINE CR1 466 610 -967 2327 79 0 0 chrX_random 7036040 7036332 -2262674 + AluSx SINE Alu 1 292 -20 297 0 0 0 chrX_random 7036333 7036349 -2262657 + (TG)n Simple_repeat Simple_repeat 1 49 0 297 0 0 0 chrX_random 7036349 7036382 -2262624 + (TG)n Simple_repeat Simple_repeat 2 34 0 2523 52 0 7 chrX_random 7036608 7036917 -2262089 + AluY SINE Alu 1 307 -4 399 207 28 28 chrX_random 7036934 7037188 -2261818 + GA-rich Low_complexity Low_complexity 1 254 0 923 69 28 0 chrX_random 7037418 7037563 -2261443 + (TTTC)n Simple_repeat Simple_repeat 1 149 0 1808 140 0 4 chrX_random 7038045 7038310 -2260696 + AluSp SINE Alu 1 264 -49 1289 181 2 16 chrX_random 7038541 7038968 -2260038 + MLT1D LTR MaLR 29 491 -14 227 242 105 11 chrX_random 7039718 7039813 -2259193 - L2 LINE L2 0 3313 3210 833 258 27 76 chrX_random 7039938 7040213 -2258793 + MIR SINE MIR 6 262 0 543 262 209 36 chrX_random 7040367 7040726 -2258280 + LTR16A LTR ERVL 18 438 -12 1073 157 15 10 chrX_random 7040775 7040973 -2258033 - MER58B DNA MER1_type -3 338 140 277 247 188 0 chrX_random 7041212 7041297 -2257709 - L2 LINE L2 -4 3268 3168 211 213 9 139 chrX_random 7041346 7041412 -2257594 + MIR SINE MIR 141 189 -73 2023 126 14 7 chrX_random 7041412 7041706 -2257300 + AluSx SINE Alu 1 296 -16 211 213 9 139 chrX_random 7041706 7041747 -2257259 + MIR SINE MIR 189 234 -28 184 256 47 0 chrX_random 7041723 7041766 -2257240 + L2 LINE L2 3256 3300 -13 * 299 399 31 20 chrX_random 7041839 7042105 -2256901 - L2 LINE L2 -233 3039 2766 436 133 0 24 chrX_random 7042152 7042235 -2256771 + MER53 DNA DNA 108 188 -1 709 246 96 67 chrX_random 7042260 7042634 -2256372 + MLT1H LTR MaLR 123 507 -42 347 234 202 0 chrX_random 7043047 7043141 -2255865 + L2 LINE L2 3193 3305 -8 714 304 47 47 chrX_random 7043190 7043595 -2255411 - MLT1L LTR MaLR -14 601 197 2355 101 0 0 chrX_random 7044365 7044672 -2254334 - AluSq SINE Alu -6 307 1 2815 68 98 5 chrX_random 7044964 7045374 -2253632 - LTR7 LTR ERV1 -2 448 1 2253 96 50 13 chrX_random 7045374 7045750 -2253256 - HERVH LTR ERV1 0 7713 7324 1344 120 18 5 chrX_random 7045750 7045967 -2253039 - HERVH LTR ERV1 -1894 5819 5600 4192 138 1 1 chrX_random 7045968 7046630 -2252376 - HERVH LTR ERV1 -2564 5149 4488 5478 90 26 14 chrX_random 7046632 7047490 -2251516 - HERVH LTR ERV1 -3720 3993 3126 * 19704 94 11 5 chrX_random 7047462 7050430 -2248576 - HERVH LTR ERV1 -4726 2987 1 2979 87 7 35 chrX_random 7050432 7050893 -2248113 - LTR7 LTR ERV1 -2 448 1 2106 98 40 0 chrX_random 7051473 7051770 -2247236 - AluSp SINE Alu -3 310 2 600 255 5 62 chrX_random 7051801 7051993 -2247013 + L2 LINE L2 3133 3313 0 23 33 0 0 chrX_random 7052269 7052299 -2246707 + AT_rich Low_complexity Low_complexity 1 30 0 6389 57 0 1 chrX_random 7052299 7053130 -2245876 - L1PA6 LINE L1 0 6154 5325 794 268 62 0 chrX_random 7053695 7053889 -2245117 + MIR SINE MIR 53 258 -4 215 309 0 44 chrX_random 7053967 7054035 -2244971 - MIR SINE MIR -76 132 68 219 103 35 17 chrX_random 7054628 7054686 -2244320 + (TAGA)n Simple_repeat Simple_repeat 4 62 0 431 299 90 17 chrX_random 7054977 7055154 -2243852 - MIR SINE MIR -10 252 63 22 0 0 0 chrX_random 7055194 7055216 -2243790 + AT_rich Low_complexity Low_complexity 1 22 0 439 299 57 21 chrX_random 7056421 7056615 -2242391 + L2 LINE L2 1710 1910 -1404 309 284 106 36 chrX_random 7056639 7056914 -2242092 + HAL1 LINE L1 118 411 -2096 1796 286 66 26 chrX_random 7057154 7058477 -2240529 - L1ME LINE L1 -611 5551 4174 1272 253 104 33 chrX_random 7058558 7058822 -2240184 - L1ME3A LINE L1 -4 6166 5922 1884 169 0 0 chrX_random 7058822 7059112 -2239894 - AluJo SINE Alu -22 290 1 1272 253 104 33 chrX_random 7059112 7059365 -2239641 - L1ME3A LINE L1 -248 5922 5612 257 345 62 0 chrX_random 7059553 7059666 -2239340 - L2 LINE L2 -3 3269 3150 874 178 33 11 chrX_random 7061005 7061185 -2237821 + MLT1E LTR MaLR 410 593 0 3885 153 62 38 chrX_random 7061231 7062192 -2236814 + L1MB8 LINE L1 5178 6161 -17 214 294 59 24 chrX_random 7062464 7062549 -2236457 + MIR3 SINE MIR 108 195 -13 26 50 0 0 chrX_random 7063511 7063551 -2235455 + AT_rich Low_complexity Low_complexity 1 40 0 697 208 56 65 chrX_random 7064800 7064961 -2234045 - L1MA9 LINE L1 -2 6310 6150 198 71 0 0 chrX_random 7064961 7064989 -2234017 + (TG)n Simple_repeat Simple_repeat 1 28 0 697 208 56 65 chrX_random 7064989 7065058 -2233948 - L1MA9 LINE L1 -162 6150 6082 * 1493 165 0 0 chrX_random 7065041 7065302 -2233704 + L1MA9 LINE L1 5709 5969 -343 1412 203 0 36 chrX_random 7065309 7065615 -2233391 - AluJo SINE Alu -5 307 13 1550 11 6 0 chrX_random 7065717 7065894 -2233112 - AluYb8 SINE Alu 0 318 141 5805 131 27 26 chrX_random 7066579 7066683 -2232323 + L1MA8 LINE L1 5227 5329 -962 2259 106 3 3 chrX_random 7066683 7066994 -2232012 + AluSx SINE Alu 1 311 -1 5805 131 27 26 chrX_random 7066994 7067950 -2231056 + L1MA8 LINE L1 5329 6285 -6 21 36 0 0 chrX_random 7068219 7068247 -2230759 + AT_rich Low_complexity Low_complexity 1 28 0 2330 85 10 0 chrX_random 7069008 7069314 -2229692 + AluY SINE Alu 1 309 -2 517 182 101 20 chrX_random 7070523 7070671 -2228335 - L1ME4a LINE L1 -2 6119 5960 680 196 110 18 chrX_random 7070722 7070885 -2228121 - MER5B DNA MER1_type 0 178 1 316 288 125 87 chrX_random 7071121 7071465 -2227541 - L2 LINE L2 -356 2958 2602 900 284 124 24 chrX_random 7071655 7072035 -2226971 - LTR33 LTR ERVL -100 421 4 708 164 14 29 chrX_random 7072395 7072535 -2226471 + L1PA16 LINE L1 6029 6166 0 11184 96 1 0 chrX_random 7073198 7074713 -2224293 + L1P LINE L1 11 1526 -4620 186 43 0 0 chrX_random 7075129 7075152 -2223854 + (CA)n Simple_repeat Simple_repeat 2 24 0 2586 106 11 0 chrX_random 7075805 7076165 -2222841 - THE1B LTR MaLR 0 364 1 1613 73 0 46 chrX_random 7076281 7076500 -2222506 - AluY SINE Alu -102 209 1 911 226 67 4 chrX_random 7076874 7077144 -2221862 - AluY SINE Alu -14 287 1 3214 87 0 2 chrX_random 7077144 7077594 -2221412 - L1P LINE L1 -953 5193 4745 356 269 0 0 chrX_random 7077594 7077672 -2221334 + L2 LINE L2 3226 3303 -10 410 271 33 16 chrX_random 7077934 7078056 -2220950 + MER5C DNA MER1_type 1 124 -200 546 188 10 0 chrX_random 7078417 7078513 -2220493 - MIR SINE MIR -75 187 91 593 288 80 52 chrX_random 7078979 7079224 -2219782 - MLT1H LTR MaLR -185 364 106 2333 65 28 0 chrX_random 7079224 7079515 -2219491 + AluSq SINE Alu 8 306 -7 593 288 80 52 chrX_random 7079515 7079596 -2219410 - MLT1H LTR MaLR -443 106 29 601 254 44 33 chrX_random 7079617 7079858 -2219148 - MLT1H LTR MaLR -27 522 276 212 246 35 0 chrX_random 7080117 7080174 -2218832 + L2 LINE L2 3214 3272 0 1118 318 155 29 chrX_random 7080300 7080479 -2218527 + L3 LINE CR1 664 819 -758 1976 162 0 0 chrX_random 7080479 7080788 -2218218 + AluJb SINE Alu 1 309 -3 1118 318 155 29 chrX_random 7080788 7081045 -2217961 + L3 LINE CR1 819 1042 -535 2434 82 3 0 chrX_random 7081045 7081348 -2217658 + AluSp SINE Alu 1 304 -9 1118 318 155 29 chrX_random 7081348 7081710 -2217296 + L3 LINE CR1 1042 1564 -13 710 242 79 5 chrX_random 7081889 7082079 -2216927 - MIR SINE MIR 0 262 59 484 328 81 23 chrX_random 7083780 7084125 -2214881 + LTR33 LTR ERVL 45 409 -112 21 0 0 0 chrX_random 7084147 7084168 -2214838 + AT_rich Low_complexity Low_complexity 1 21 0 1659 225 11 28 chrX_random 7084269 7084629 -2214377 - MLT1A1 LTR MaLR -11 354 1 613 219 84 122 chrX_random 7084685 7084923 -2214083 - MIR SINE MIR 0 262 34 423 270 50 19 chrX_random 7085154 7085313 -2213693 - MIR SINE MIR -14 248 85 884 212 41 0 chrX_random 7085881 7086051 -2212955 - MER45A DNA AcHobo -1 177 1 2190 111 0 26 chrX_random 7086280 7086587 -2212419 - AluSx SINE Alu -13 299 1 364 274 34 34 chrX_random 7086595 7086712 -2212294 - L2 LINE L2 0 3313 3197 1539 194 13 75 chrX_random 7087860 7088247 -2210759 - MLT1A2 LTR MaLR -11 363 1 245 263 75 83 chrX_random 7088354 7088487 -2210519 - MIR SINE MIR -111 151 20 557 185 14 14 chrX_random 7088907 7089053 -2209953 + GA-rich Low_complexity Low_complexity 2 147 0 261 139 0 0 chrX_random 7089079 7089122 -2209884 + (GAA)n Simple_repeat Simple_repeat 3 45 0 1206 203 9 0 chrX_random 7089338 7089560 -2209446 - MER58A DNA MER1_type 0 224 1 2221 191 60 18 chrX_random 7089859 7089906 -2209100 - MLT2B1 LTR ERVL 0 520 476 459 0 0 0 chrX_random 7089906 7089957 -2209049 + (CA)n Simple_repeat Simple_repeat 2 52 0 2221 191 60 18 chrX_random 7089957 7090406 -2208600 - MLT2B1 LTR ERVL -44 476 3 2280 95 3 0 chrX_random 7090466 7090761 -2208245 + AluSp SINE Alu 1 296 -17 2331 199 130 49 chrX_random 7090764 7091494 -2207512 + L1ME2 LINE L1 5367 6155 -9 269 180 0 124 chrX_random 7091538 7091627 -2207379 - MLT1J LTR MaLR -211 300 223 1885 184 130 39 chrX_random 7093078 7093541 -2205465 + MLT1D LTR MaLR 1 505 0 281 261 25 116 chrX_random 7093544 7093743 -2205263 - MIR SINE MIR -74 188 8 2307 108 3 0 chrX_random 7094012 7094318 -2204688 + AluSx SINE Alu 1 307 -5 599 273 44 24 chrX_random 7095379 7095742 -2203264 + LTR16C LTR ERVL 99 491 0 337 328 84 0 chrX_random 7096895 7097026 -2201980 - MIR SINE MIR -35 227 86 880 256 34 61 chrX_random 7097163 7097491 -2201515 - MLT1H LTR MaLR -193 356 38 459 264 66 8 chrX_random 7099338 7099459 -2199547 - L2 LINE L2 -8 3264 3137 234 286 16 0 chrX_random 7102837 7102900 -2196106 + GA-rich Low_complexity Low_complexity 3 66 0 306 125 0 0 chrX_random 7102901 7102949 -2196057 + (GGAA)n Simple_repeat Simple_repeat 3 50 0 218 306 130 0 chrX_random 7103186 7103294 -2195712 + MIR SINE MIR 82 203 -59 1123 308 78 26 chrX_random 7104034 7104563 -2194443 - MLT1K LTR MaLR -19 569 14 2510 77 3 0 chrX_random 7105558 7105870 -2193136 - AluSp SINE Alu 0 313 1 1852 123 22 42 chrX_random 7106007 7106136 -2192870 - L1MA8 LINE L1 -5 6286 6156 2401 126 11 8 chrX_random 7106136 7106510 -2192496 + THE1C LTR MaLR 1 375 0 1852 123 22 42 chrX_random 7106510 7106739 -2192267 - L1MA8 LINE L1 -135 6156 5935 1975 166 3 0 chrX_random 7106807 7107145 -2191861 + L1PB4 LINE L1 5817 6155 -1 2065 129 7 7 chrX_random 7107222 7107437 -2191569 - AluSg1 SINE Alu 0 343 126 213 65 0 0 chrX_random 7107437 7107468 -2191538 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2065 129 7 7 chrX_random 7107468 7107595 -2191411 - AluSg1 SINE Alu -216 127 1 259 255 0 32 chrX_random 7107646 7107740 -2191266 - HAL1b LINE L1 -574 774 684 250 228 0 0 chrX_random 7107746 7107803 -2191203 - HAL1b LINE L1 -703 645 589 15101 114 27 13 chrX_random 7107834 7108450 -2190556 + Tigger1 DNA MER2_type 80 686 -1732 2042 136 0 43 chrX_random 7108450 7108802 -2190204 - MER1B DNA MER1_type 0 337 1 15101 114 27 13 chrX_random 7108802 7110492 -2188514 + Tigger1 DNA MER2_type 686 2418 0 747 270 113 16 chrX_random 7110498 7110816 -2188190 - HAL1b LINE L1 -803 545 197 2250 91 3 0 chrX_random 7111061 7111348 -2187658 - AluSc SINE Alu -21 288 1 648 266 60 10 chrX_random 7111545 7111744 -2187262 - LTR16C LTR ERVL -9 482 274 394 227 195 39 chrX_random 7111746 7111874 -2187132 - MER5A DNA MER1_type -4 185 38 345 295 133 29 chrX_random 7111934 7112107 -2186899 - LTR16C LTR ERVL -272 219 29 33 25 0 0 chrX_random 7112690 7112730 -2186276 + AT_rich Low_complexity Low_complexity 1 40 0 187 379 11 11 chrX_random 7112948 7113035 -2185971 + MIR SINE MIR 60 146 -62 249 298 21 21 chrX_random 7113214 7113308 -2185698 + L3b LINE CR1 1287 1380 -203 1682 106 19 0 chrX_random 7113324 7113589 -2185417 - L1MA5A LINE L1 0 6297 6028 1795 135 0 8 chrX_random 7113766 7114026 -2184980 - AluSx SINE Alu -39 273 16 6210 119 39 1 chrX_random 7114110 7115118 -2183888 - L1MA5 LINE L1 0 6300 5255 297 203 0 0 chrX_random 7115187 7115246 -2183760 - L1ME1 LINE L1 -270 5896 5838 1671 179 38 0 chrX_random 7115310 7115600 -2183406 + AluJb SINE Alu 1 301 -11 773 222 14 43 chrX_random 7115810 7115896 -2183110 - MLT2B1 LTR ERVL -1 519 432 2281 94 0 7 chrX_random 7115896 7116193 -2182813 + AluSq SINE Alu 1 295 -18 773 222 14 43 chrX_random 7116193 7116313 -2182693 - MLT2B1 LTR ERVL -88 432 319 229 307 53 13 chrX_random 7116345 7116420 -2182586 - MER5C DNA MER1_type -246 78 1 325 281 125 19 chrX_random 7117246 7117406 -2181600 - L1ME4a LINE L1 -11 6110 5934 3682 80 8 14 chrX_random 7117523 7118037 -2180969 - MER9 LTR ERVK 0 511 1 293 277 169 47 chrX_random 7118579 7118727 -2180279 - MLT1H LTR MaLR 0 549 384 2152 115 0 3 chrX_random 7119075 7119371 -2179635 + AluSx SINE Alu 1 295 -17 255 230 122 0 chrX_random 7119598 7119672 -2179334 - LTR67 LTR ERVL -7 550 468 589 319 48 39 chrX_random 7120282 7120648 -2178358 - LTR16A1 LTR ERVL -7 450 106 275 298 70 35 chrX_random 7120907 7121021 -2177985 + LTR67 LTR ERVL 98 215 -342 712 221 7 0 chrX_random 7121951 7122087 -2176919 + MER20 DNA MER1_type 81 217 -2 511 353 70 24 chrX_random 7122096 7122470 -2176536 + L2 LINE L2 2470 2860 -454 299 370 132 28 chrX_random 7122515 7122842 -2176164 + L2 LINE L2 2912 3272 0 189 195 0 0 chrX_random 7123663 7123704 -2175302 + (TATATG)n Simple_repeat Simple_repeat 2 42 0 796 240 29 53 chrX_random 7124825 7125033 -2173973 + MER63A DNA MER1_type 1 203 -7 3413 127 0 4 chrX_random 7125241 7125778 -2173228 - L1MA3 LINE L1 -3 6302 5768 383 259 18 112 chrX_random 7126044 7126214 -2172792 + LTR67 LTR ERVL 31 184 -373 713 112 0 17 chrX_random 7126214 7126343 -2172663 + L1MA3 LINE L1 5840 5967 -324 366 100 0 0 chrX_random 7126473 7126533 -2172473 + (CAG)n Simple_repeat Simple_repeat 2 61 0 2364 93 3 3 chrX_random 7126566 7126878 -2172128 - AluSx SINE Alu 0 312 1 346 175 0 0 chrX_random 7127031 7127088 -2171918 + LTR67 LTR ERVL 499 555 -2 282 266 48 32 chrX_random 7127501 7127625 -2171381 + MLT1H LTR MaLR 71 196 -353 250 182 14 116 chrX_random 7127681 7127784 -2171222 + MLT1G LTR MaLR 495 557 -33 1436 163 28 7 chrX_random 7127784 7128066 -2170940 + AluSq SINE Alu 1 288 -25 21 0 0 0 chrX_random 7128841 7128862 -2170144 + AT_rich Low_complexity Low_complexity 1 21 0 841 281 20 16 chrX_random 7128903 7129152 -2169854 + Charlie8 DNA MER1_type 27 276 -2141 609 326 124 4 chrX_random 7129216 7129636 -2169370 + LTR33 LTR ERVL 1 519 -2 2055 132 35 0 chrX_random 7129754 7130041 -2168965 - AluSx SINE Alu -9 303 7 238 252 41 65 chrX_random 7130280 7130403 -2168603 - MLT2E LTR ERVL -7 621 502 322 254 17 51 chrX_random 7130553 7130671 -2168335 - MLT2E LTR ERVL -479 149 36 846 277 32 0 chrX_random 7131544 7131797 -2167209 + MIR SINE MIR 2 262 0 272 374 20 0 chrX_random 7132074 7132221 -2166785 + L2 LINE L2 2897 3046 -267 2232 107 3 3 chrX_random 7132232 7132541 -2166465 - AluSq SINE Alu -4 309 1 1342 205 35 39 chrX_random 7133085 7133515 -2165491 + MLT1D LTR MaLR 24 505 0 289 252 101 42 chrX_random 7134967 7135086 -2163920 + MIR SINE MIR 29 154 -108 329 0 24 0 chrX_random 7135357 7135398 -2163608 + (TG)n Simple_repeat Simple_repeat 1 42 0 387 56 0 0 chrX_random 7136538 7136592 -2162414 + (TG)n Simple_repeat Simple_repeat 2 55 0 215 310 0 0 chrX_random 7137126 7137184 -2161822 - MIR3 SINE MIR -4 204 147 486 303 26 26 chrX_random 7137208 7137442 -2161564 + MER112 DNA MER1_type 4 237 -23 460 276 167 6 chrX_random 7137458 7137614 -2161392 + MER5A DNA MER1_type 9 189 0 273 325 32 8 chrX_random 7137917 7138043 -2160963 + L2 LINE L2 2431 2559 -755 3569 177 38 15 chrX_random 7139236 7139972 -2159034 - L1MB8 LINE L1 -11 6167 5415 6163 80 26 6 chrX_random 7140146 7141601 -2157405 + L1PA13 LINE L1 4688 6159 -4 378 237 141 39 chrX_random 7141755 7141911 -2157095 + MIR SINE MIR 91 262 0 208 320 178 13 chrX_random 7141980 7142205 -2156801 + L3b LINE CR1 1261 1522 -61 183 378 47 39 chrX_random 7143360 7143487 -2155519 + MIR SINE MIR 18 145 -63 965 228 38 25 chrX_random 7143972 7144247 -2154759 + L1MC/D LINE L1 5516 5792 -561 2221 102 7 0 chrX_random 7144986 7145279 -2153727 + AluSx SINE Alu 1 295 -17 235 397 9 9 chrX_random 7145646 7145762 -2153244 - L2 LINE L2 -214 3058 2943 304 287 79 63 chrX_random 7146792 7147109 -2151897 + L1ME LINE L1 5357 5678 -443 1129 162 20 5 chrX_random 7147252 7147456 -2151550 - L1PA16 LINE L1 -1 6165 5959 1519 114 29 0 chrX_random 7147471 7147716 -2151290 - L1MA2 LINE L1 0 6304 6053 1526 121 0 97 chrX_random 7147716 7148014 -2150992 - L1PA16 LINE L1 -191 5975 5707 1701 141 39 50 chrX_random 7148209 7148571 -2150435 - L1MA7 LINE L1 -4 6287 5930 2002 120 49 27 chrX_random 7148647 7149014 -2149992 - THE1C LTR MaLR 0 375 1 813 290 41 55 chrX_random 7149611 7150245 -2148761 + L1M4 LINE L1 2206 2830 -3316 1782 214 68 16 chrX_random 7150265 7150690 -2148316 + LTR40b LTR ERVL 4 450 -12 8195 179 28 50 chrX_random 7150741 7152243 -2146763 + L1PA15 LINE L1 2903 4436 -1729 2234 118 0 0 chrX_random 7152243 7152548 -2146458 + AluSq SINE Alu 1 305 -8 8195 179 28 50 chrX_random 7152548 7153834 -2145172 + L1PA15 LINE L1 4436 5674 -491 2133 129 7 0 chrX_random 7153834 7154128 -2144878 + AluSx SINE Alu 1 296 -16 8195 179 28 50 chrX_random 7154128 7154580 -2144426 + L1PA15 LINE L1 5674 6134 -31 2643 136 16 71 chrX_random 7154577 7154833 -2144173 + L1MA9 LINE L1 5064 5333 -979 * 2065 68 38 0 chrX_random 7154833 7155120 -2143886 + AluSq SINE Alu 15 311 0 196 42 0 0 chrX_random 7155096 7155299 -2143707 + (TAA)n Simple_repeat Simple_repeat 2 204 0 2643 136 16 71 chrX_random 7155120 7155742 -2143264 + L1MA9 LINE L1 5333 5746 -566 291 171 57 7 chrX_random 7155752 7155892 -2143114 + (TA)n Simple_repeat Simple_repeat 2 148 0 2802 129 8 45 chrX_random 7155928 7156358 -2142648 + L1MA9 LINE L1 5776 6186 -126 2198 92 48 0 chrX_random 7156358 7156651 -2142355 - AluSx SINE Alu -4 308 2 2802 129 8 45 chrX_random 7156651 7156732 -2142274 + L1MA9 LINE L1 6186 6268 -44 7743 105 7 4 chrX_random 7156732 7157957 -2141049 + HSMAR1 DNA Mariner 1 1280 -7 4809 174 56 34 chrX_random 7157988 7159457 -2139549 + L1MC1 LINE L1 4832 6332 -1 387 300 8 0 chrX_random 7159462 7159592 -2139414 + L1ME LINE L1 5317 5447 -717 7629 28 0 1 chrX_random 7159602 7161203 -2137803 - L1PA3 LINE L1 0 6155 4556 4335 23 0 0 chrX_random 7161203 7161735 -2137271 + L1P LINE L1 3829 4360 -1786 339 274 129 5 chrX_random 7161728 7161929 -2137077 + L1ME LINE L1 5431 5656 -510 * 294 87 0 0 chrX_random 7161936 7161982 -2137024 + (TCTCTG)n Simple_repeat Simple_repeat 3 48 0 * 411 21 0 0 chrX_random 7161981 7162029 -2136977 + (CA)n Simple_repeat Simple_repeat 1 48 0 2471 74 3 3 chrX_random 7163003 7163314 -2135692 + AluSp SINE Alu 1 311 -2 2495 53 0 10 chrX_random 7163315 7163618 -2135388 + AluY SINE Alu 2 301 -10 1298 194 51 6 chrX_random 7163845 7164200 -2134806 - MER114 LTR ERV -53 595 225 676 186 0 16 chrX_random 7164219 7164348 -2134658 + FLAM_A SINE Alu 9 135 -7 1045 177 41 64 chrX_random 7164470 7164814 -2134192 + L1MC5 LINE L1 7249 7584 -377 702 286 72 19 chrX_random 7164982 7165345 -2133661 - L1MC5 LINE L1 -424 7537 7156 34 65 0 0 chrX_random 7165369 7165431 -2133575 + AT_rich Low_complexity Low_complexity 1 62 0 655 216 8 0 chrX_random 7165441 7165566 -2133440 - FLAM_A SINE Alu -6 127 2 21 0 0 0 chrX_random 7166295 7166316 -2132690 + AT_rich Low_complexity Low_complexity 1 21 0 413 351 71 38 chrX_random 7166560 7166607 -2132399 + L3 LINE CR1 229 273 -1304 1664 91 45 0 chrX_random 7166607 7166827 -2132179 - MER30 DNA MER1_type 0 230 1 413 351 71 38 chrX_random 7166827 7167018 -2131988 + L3 LINE CR1 273 475 -1102 1492 229 71 55 chrX_random 7167018 7167511 -2131495 - MLT2B1 LTR ERVL -2 518 18 319 302 132 8 chrX_random 7167530 7167659 -2131347 + L3 LINE CR1 466 610 -967 2317 82 0 0 chrX_random 7167992 7168284 -2130722 + AluSx SINE Alu 1 292 -20 297 0 0 0 chrX_random 7168285 7168297 -2130709 + (TG)n Simple_repeat Simple_repeat 1 45 0 297 0 0 0 chrX_random 7168297 7168330 -2130676 + (TG)n Simple_repeat Simple_repeat 2 34 0 2571 42 0 7 chrX_random 7168554 7168863 -2130143 + AluY SINE Alu 1 307 -4 399 207 28 28 chrX_random 7168880 7169134 -2129872 + GA-rich Low_complexity Low_complexity 1 254 0 923 69 28 0 chrX_random 7169364 7169509 -2129497 + (TTTC)n Simple_repeat Simple_repeat 1 149 0 1808 140 0 4 chrX_random 7169991 7170256 -2128750 + AluSp SINE Alu 1 264 -49 1289 179 2 16 chrX_random 7170487 7170914 -2128092 + MLT1D LTR MaLR 29 491 -14 248 250 94 10 chrX_random 7171664 7171760 -2127246 - L2 LINE L2 0 3313 3210 833 258 27 76 chrX_random 7171885 7172160 -2126846 + MIR SINE MIR 6 262 0 543 262 209 36 chrX_random 7172314 7172673 -2126333 + LTR16A LTR ERVL 18 438 -12 1745 177 12 15 chrX_random 7172722 7173061 -2125945 - MER58B DNA MER1_type -3 338 1 2407 95 0 0 chrX_random 7173252 7173556 -2125450 - AluSq SINE Alu -9 304 1 2235 100 3 7 chrX_random 7173970 7174269 -2124737 - AluSq SINE Alu -15 298 1 487 298 32 115 chrX_random 7175619 7175931 -2123075 - L2 LINE L2 -1 3271 2986 226 333 9 61 chrX_random 7176164 7176278 -2122728 + L2 LINE L2 3155 3262 -10 3720 247 124 25 chrX_random 7177969 7178059 -2120947 + HAL1 LINE L1 12 92 -2415 351 44 0 0 chrX_random 7178059 7178104 -2120902 + (CA)n Simple_repeat Simple_repeat 2 46 0 3720 247 124 25 chrX_random 7178104 7178219 -2120787 + HAL1 LINE L1 92 194 -2313 2222 90 65 8 chrX_random 7178219 7178574 -2120432 + THE1C LTR MaLR 1 375 0 3720 247 124 25 chrX_random 7178574 7179981 -2119025 + HAL1 LINE L1 194 1786 -721 901 343 14 25 chrX_random 7179986 7180350 -2118656 + MER115 DNA AcHobo 5 364 -329 437 260 119 40 chrX_random 7180436 7180663 -2118343 + HAL1 LINE L1 1788 2032 -475 673 180 93 0 chrX_random 7180671 7180821 -2118185 + MER3 DNA MER1_type 1 164 -45 2273 119 7 0 chrX_random 7180922 7181232 -2117774 - AluSx SINE Alu 0 312 1 2362 105 0 0 chrX_random 7181386 7181690 -2117316 + AluSx SINE Alu 1 304 -8 444 186 167 0 chrX_random 7181937 7182039 -2116967 + MER3 DNA MER1_type 2 120 -89 216 67 0 0 chrX_random 7182042 7182072 -2116934 + (TTTAA)n Simple_repeat Simple_repeat 1 30 0 237 188 21 0 chrX_random 7182072 7182120 -2116886 - MER3 DNA MER1_type -120 89 41 2007 129 44 0 chrX_random 7182168 7182463 -2116543 + AluJo SINE Alu 1 308 -4 235 209 0 146 chrX_random 7182501 7182611 -2116395 + HAL1 LINE L1 2091 2184 -323 667 254 113 24 chrX_random 7182777 7183068 -2115938 + HAL1 LINE L1 2185 2501 -6 25 51 0 0 chrX_random 7183068 7183107 -2115899 + AT_rich Low_complexity Low_complexity 1 39 0 2291 94 0 3 chrX_random 7183116 7183414 -2115592 + AluSx SINE Alu 1 297 -15 238 354 173 10 chrX_random 7184163 7184683 -2114323 - L2 LINE L2 -452 2862 2258 2276 83 3 23 chrX_random 7184892 7185194 -2113812 + AluSg SINE Alu 1 296 -14 23 0 0 0 chrX_random 7185348 7185371 -2113635 + AT_rich Low_complexity Low_complexity 1 23 0 216 0 0 0 chrX_random 7185398 7185422 -2113584 + (CA)n Simple_repeat Simple_repeat 1 24 0 229 286 71 0 chrX_random 7185439 7185495 -2113511 + MIR SINE MIR 19 78 -130 509 254 144 17 chrX_random 7185529 7185710 -2113296 - MIR SINE MIR -3 259 56 289 317 10 0 chrX_random 7185715 7185816 -2113190 + MIR3 SINE MIR 104 205 -3 2289 94 3 0 chrX_random 7186060 7186491 -2112515 + AluSp SINE Alu 1 432 0 2077 107 0 30 chrX_random 7186498 7186797 -2112209 + AluSx SINE Alu 1 290 -22 202 156 31 0 chrX_random 7187140 7187204 -2111802 + (TA)n Simple_repeat Simple_repeat 1 66 0 1069 185 42 0 chrX_random 7187504 7187769 -2111237 - L1MA8 LINE L1 -2 6289 6014 867 234 72 5 chrX_random 7187884 7188093 -2110913 - MER58A DNA MER1_type -1 223 1 476 321 0 0 chrX_random 7188266 7188400 -2110606 - MIR SINE MIR -108 154 21 2196 116 0 0 chrX_random 7188797 7189119 -2109887 + AluSx SINE Alu 1 322 0 194 288 150 40 chrX_random 7189125 7189351 -2109655 + L2 LINE L2 2726 2976 -338 318 197 0 0 chrX_random 7190066 7190132 -2108874 - L1ME LINE L1 -536 5585 5520 642 200 93 71 chrX_random 7191242 7191522 -2107484 + L1MC4 LINE L1 7627 7912 -130 306 258 33 0 chrX_random 7191600 7191720 -2107286 + L1MC4 LINE L1 7919 8042 0 21 57 0 0 chrX_random 7193315 7193350 -2105656 + AT_rich Low_complexity Low_complexity 1 35 0 2505 53 0 0 chrX_random 7193353 7193656 -2105350 + AluY SINE Alu 1 303 -8 736 317 52 3 chrX_random 7193689 7193998 -2105008 + L1MC/D LINE L1 5483 5806 -2002 2357 101 3 0 chrX_random 7193998 7194304 -2104702 + AluSx SINE Alu 1 307 -5 5846 92 1 1 chrX_random 7194414 7195239 -2103767 - L1MA2 LINE L1 0 6304 5480 285 29 0 0 chrX_random 7195637 7195671 -2103335 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 2271 81 35 0 chrX_random 7196820 7197104 -2101902 + AluSx SINE Alu 1 294 -18 286 134 30 0 chrX_random 7197136 7197203 -2101803 + (TA)n Simple_repeat Simple_repeat 2 70 0 207 0 0 0 chrX_random 7197203 7197226 -2101780 + (CA)n Simple_repeat Simple_repeat 2 24 0 239 348 21 37 chrX_random 7197284 7197471 -2101535 + L2 LINE L2 1827 2010 -1304 3819 140 5 2 chrX_random 7197525 7198124 -2100882 - MER7C DNA MER2_type -1 601 1 362 286 123 23 chrX_random 7198236 7198407 -2100599 - L1MC4a LINE L1 -1873 5935 5748 2125 102 7 0 chrX_random 7198585 7198889 -2100117 + AluSq SINE Alu 1 306 0 773 130 0 87 chrX_random 7198899 7199037 -2099969 + Tigger3(Golem) DNA MER2_type 1 126 -2903 2385 76 0 3 chrX_random 7199066 7199367 -2099639 + AluSc SINE Alu 1 300 -9 1282 44 0 0 chrX_random 7200443 7200602 -2098404 - L1PA4 LINE L1 -3 6152 5994 2075 153 43 19 chrX_random 7201040 7201108 -2097898 - MSTB1 LTR MaLR 0 432 367 2329 104 0 3 chrX_random 7201108 7201417 -2097589 + AluSp SINE Alu 1 308 -5 2075 153 43 19 chrX_random 7201417 7201766 -2097240 - MSTB1 LTR MaLR -65 367 5 2813 201 27 5 chrX_random 7201770 7202323 -2096683 - MSTB1-int LTR MaLR 0 1651 1087 1654 258 32 9 chrX_random 7202326 7202761 -2096245 - MSTB1-int LTR MaLR -736 915 471 2443 115 23 23 chrX_random 7202804 7203044 -2095962 - L1MA2 LINE L1 0 6304 6062 2080 127 7 7 chrX_random 7203044 7203352 -2095654 - AluSx SINE Alu -4 308 1 2443 115 23 23 chrX_random 7203352 7203538 -2095468 - L1MA2 LINE L1 -241 6063 5878 673 100 0 0 chrX_random 7203538 7203665 -2095341 - AluSg SINE Alu 0 334 208 1030 100 7 7 chrX_random 7203665 7203805 -2095201 - AluSg SINE Alu -170 140 1 3171 93 6 21 chrX_random 7203805 7204288 -2094718 - L1MA2 LINE L1 -417 5888 5413 1365 186 11 4 chrX_random 7204277 7204546 -2094460 - MSTB1-int LTR MaLR -1167 484 214 * 354 182 0 26 chrX_random 7204554 7204631 -2094375 - MSTB1-int LTR MaLR -1576 75 1 2104 162 69 10 chrX_random 7204631 7205039 -2093967 - MSTB1 LTR MaLR 0 432 1 464 191 13 102 chrX_random 7206365 7206522 -2092484 + L1MA9 LINE L1 6132 6274 -38 534 239 187 19 chrX_random 7206540 7206695 -2092311 - MER5A DNA MER1_type 0 189 9 550 257 102 29 chrX_random 7206755 7206961 -2092045 - MIR SINE MIR -13 249 29 25 0 0 0 chrX_random 7207404 7207429 -2091577 + AT_rich Low_complexity Low_complexity 1 25 0 2271 96 3 7 chrX_random 7207641 7207942 -2091064 + AluSx SINE Alu 1 300 -12 202 255 0 20 chrX_random 7208007 7208058 -2090948 - L2 LINE L2 -1 3312 3263 339 294 63 21 chrX_random 7208798 7208941 -2090065 - MER5A DNA MER1_type -1 188 40 199 250 0 0 chrX_random 7208962 7209006 -2090000 + MER5B DNA MER1_type 1 44 -134 1111 129 12 0 chrX_random 7209006 7209169 -2089837 - AluJb SINE Alu -2 310 146 364 240 58 10 chrX_random 7209193 7209297 -2089709 - MER5B DNA MER1_type -53 125 17 301 193 0 0 chrX_random 7209327 7209384 -2089622 - Charlie1a DNA MER1_type -1 1454 1398 892 173 68 0 chrX_random 7209385 7209547 -2089459 + FAM SINE Alu 1 47 -2 5659 174 58 84 chrX_random 7209547 7210672 -2088334 - Charlie1a DNA MER1_type -1356 1405 238 499 60 12 83 chrX_random 7210672 7210795 -2088211 - AluSc SINE Alu 0 309 215 5659 174 58 84 chrX_random 7210795 7211028 -2087978 - Charlie1a DNA MER1_type -2523 238 1 292 306 118 18 chrX_random 7211148 7211318 -2087688 - MIR SINE MIR -75 187 1 416 269 132 42 chrX_random 7211347 7211559 -2087447 - MIR SINE MIR -3 259 29 2402 70 3 0 chrX_random 7211579 7211887 -2087119 + AluSp SINE Alu 1 309 0 245 262 39 19 chrX_random 7214417 7214520 -2084486 + L1MC4a LINE L1 5824 5928 -1880 235 250 25 0 chrX_random 7214541 7214621 -2084385 - L1MC4 LINE L1 -1347 6695 6614 276 154 0 0 chrX_random 7214623 7214675 -2084331 + (TA)n Simple_repeat Simple_repeat 2 53 0 231 256 70 0 chrX_random 7214746 7214832 -2084174 - L1MC4 LINE L1 -1339 6703 6612 2913 7 0 0 chrX_random 7214836 7215146 -2083860 - AluYa5 SINE Alu -1 310 1 265 184 52 37 chrX_random 7215167 7215303 -2083703 + (TA)n Simple_repeat Simple_repeat 2 139 0 26 50 0 0 chrX_random 7215523 7215563 -2083443 + AT_rich Low_complexity Low_complexity 1 40 0 711 183 9 0 chrX_random 7216367 7216482 -2082524 - FLAM_C SINE Alu -26 117 2 237 184 0 41 chrX_random 7216634 7216683 -2082323 - MLT1A2 LTR MaLR 0 374 328 6602 69 31 53 chrX_random 7216691 7219062 -2079944 + SVA Other Other 56 1386 0 201 364 31 19 chrX_random 7220003 7220165 -2078841 - L2 LINE L2 -246 3026 2863 2412 85 0 13 chrX_random 7220477 7220613 -2078393 + AluSx SINE Alu 1 137 -175 2329 85 0 52 chrX_random 7220613 7220943 -2078063 + AluSp SINE Alu 1 313 0 2412 85 0 13 chrX_random 7220943 7221112 -2077894 + AluSx SINE Alu 137 302 -10 2226 93 7 0 chrX_random 7221308 7221617 -2077389 + AluSq SINE Alu 1 311 0 340 194 25 0 chrX_random 7221622 7221710 -2077296 + L1M1 LINE L1 5382 5470 -681 849 311 44 6 chrX_random 7221713 7222031 -2076975 + L1MC4a LINE L1 5583 5912 -1896 214 147 0 0 chrX_random 7222061 7222095 -2076911 + (TG)n Simple_repeat Simple_repeat 2 35 0 22 0 0 0 chrX_random 7222260 7222282 -2076724 + AT_rich Low_complexity Low_complexity 1 22 0 2164 136 0 0 chrX_random 7222712 7223021 -2075985 + AluJb SINE Alu 1 309 -3 1677 88 18 13 chrX_random 7223210 7223437 -2075569 + MER30 DNA MER1_type 2 229 -1 1806 150 63 92 chrX_random 7224066 7224492 -2074514 - MLT2D LTR ERVL 0 414 1 960 268 139 31 chrX_random 7224538 7224926 -2074080 - MLT1J LTR MaLR -52 459 30 2571 78 3 0 chrX_random 7225486 7225819 -2073187 + MER4C LTR ERV1 1 334 -131 447 284 28 60 chrX_random 7225894 7226010 -2072996 - MIR SINE MIR -6 256 138 2172 128 0 0 chrX_random 7226010 7226316 -2072690 - AluSx SINE Alu -6 306 1 447 284 28 60 chrX_random 7226316 7226344 -2072662 - MIR SINE MIR -124 138 111 2182 113 10 3 chrX_random 7226344 7226645 -2072361 + AluSx SINE Alu 1 303 -9 447 284 28 60 chrX_random 7226645 7226662 -2072344 - MIR SINE MIR -151 111 95 1963 131 3 29 chrX_random 7226662 7226968 -2072038 + AluJo SINE Alu 1 298 -14 447 284 28 60 chrX_random 7226968 7227019 -2071987 - MIR SINE MIR -167 95 49 2100 90 52 21 chrX_random 7227340 7227628 -2071378 + AluSq SINE Alu 1 297 -16 2286 75 3 20 chrX_random 7228269 7228574 -2070432 + AluY SINE Alu 1 300 -11 21 0 0 0 chrX_random 7228720 7228741 -2070265 + AT_rich Low_complexity Low_complexity 1 21 0 673 197 184 0 chrX_random 7229071 7229223 -2069783 + L1ME2 LINE L1 37 216 -6180 2806 204 60 36 chrX_random 7229225 7229773 -2069233 + L1ME2 LINE L1 3823 4495 -1720 1804 151 0 15 chrX_random 7229773 7230045 -2068961 + AluJb SINE Alu 17 284 -28 2806 204 60 36 chrX_random 7230045 7230356 -2068650 + L1ME2 LINE L1 4495 4797 -1418 2391 161 27 3 chrX_random 7230394 7230760 -2068246 + Tigger7 DNA MER2_type 1 375 -2112 1387 151 0 91 chrX_random 7230751 7230790 -2068216 + Tigger7 DNA MER2_type 2316 2357 -230 * 439 73 59 0 chrX_random 7230790 7230858 -2068148 + L1MA5 LINE L1 6229 6300 0 1387 151 0 91 chrX_random 7230858 7231116 -2067890 + Tigger7 DNA MER2_type 2357 2586 -1 2305 199 88 22 chrX_random 7231127 7232088 -2066918 + L1ME2 LINE L1 4835 5847 -388 792 164 0 8 chrX_random 7232088 7232216 -2066790 + FLAM_A SINE Alu 1 127 -6 2305 199 88 22 chrX_random 7232216 7232264 -2066742 + L1ME2 LINE L1 5847 5890 -345 1441 189 4 15 chrX_random 7232263 7232528 -2066478 + L1M3f LINE L1 1 262 -5066 * 5039 125 53 26 chrX_random 7233340 7234175 -2064831 + L1M3f LINE L1 251 1107 -4221 676 236 28 16 chrX_random 7234170 7234352 -2064654 + L1ME2 LINE L1 5883 6066 -167 * 2457 81 0 0 chrX_random 7234724 7235021 -2063985 - AluSg SINE Alu -13 297 1 2456 169 9 23 chrX_random 7235443 7235875 -2063131 + MSTB LTR MaLR 1 426 0 1879 124 0 25 chrX_random 7235980 7236262 -2062744 + AluSx SINE Alu 1 275 -37 309 51 0 0 chrX_random 7236300 7236339 -2062667 + (CAAAA)n Simple_repeat Simple_repeat 1 39 0 675 203 68 80 chrX_random 7236344 7236581 -2062425 - LTR41 LTR ERVL -61 712 479 1920 146 60 101 chrX_random 7236581 7236864 -2062142 + LTR54B LTR ERV1 1 255 -243 2719 33 3 0 chrX_random 7236864 7237170 -2061836 + AluY SINE Alu 1 307 -4 1920 146 60 101 chrX_random 7237170 7237401 -2061605 + LTR54B LTR ERV1 255 494 -4 1430 217 154 23 chrX_random 7237401 7237829 -2061177 - LTR41 LTR ERVL -289 484 1 1322 217 101 3 chrX_random 7238461 7238834 -2060172 - MER110A LTR ERV1 0 468 93 384 153 14 0 chrX_random 7238840 7238912 -2060094 + L1MA2 LINE L1 4116 4188 -1958 1874 133 26 0 chrX_random 7238912 7239040 -2059966 + AluSx SINE Alu 1 124 -188 252 0 0 0 chrX_random 7239040 7239068 -2059938 + (TAA)n Simple_repeat Simple_repeat 2 29 0 1874 133 26 0 chrX_random 7239068 7239209 -2059797 + AluSx SINE Alu 124 277 -35 6927 107 7 37 chrX_random 7239218 7239648 -2059358 + L1MA2 LINE L1 5120 5561 -743 2638 46 0 3 chrX_random 7239648 7239952 -2059054 + AluY SINE Alu 1 303 -8 6927 107 7 37 chrX_random 7239952 7240743 -2058263 + L1MA2 LINE L1 5561 6304 0 49 18 0 0 chrX_random 7240743 7240799 -2058207 + AT_rich Low_complexity Low_complexity 1 56 0 2366 70 0 3 chrX_random 7240807 7241120 -2057886 + AluY SINE Alu 1 312 0 237 174 72 58 chrX_random 7241130 7241199 -2057807 - MER110A LTR ERV1 -398 70 1 853 242 24 0 chrX_random 7241344 7241555 -2057451 - MIR SINE MIR -46 216 1 188 206 0 0 chrX_random 7241622 7241656 -2057350 - MIR SINE MIR -157 105 72 3219 136 117 22 chrX_random 7242396 7242992 -2056014 + MER39B LTR ERV1 1 653 0 2352 83 3 13 chrX_random 7244490 7244804 -2054202 + AluSx SINE Alu 1 311 -1 608 173 6 110 chrX_random 7245102 7245275 -2053731 + MLT1D LTR MaLR 1 155 -471 1617 171 77 23 chrX_random 7246150 7246514 -2052492 + MLT1D LTR MaLR 116 501 -4 243 0 0 0 chrX_random 7247061 7247088 -2051918 + (CA)n Simple_repeat Simple_repeat 2 28 0 696 202 12 20 chrX_random 7247092 7247244 -2051762 + MSTC LTR MaLR 1 150 -276 1086 131 0 0 chrX_random 7247245 7247398 -2051608 + AluSx SINE Alu 1 153 -159 2627 58 0 3 chrX_random 7247795 7248105 -2050901 - AluY SINE Alu -2 309 1 258 206 82 0 chrX_random 7248208 7248281 -2050725 - L1M4 LINE L1 -1537 4609 4531 1982 154 0 3 chrX_random 7248400 7248705 -2050301 - AluJb SINE Alu -8 304 1 503 61 0 0 chrX_random 7248988 7249054 -2049952 - L1P LINE L1 -745 5429 5364 5027 83 3 25 chrX_random 7249054 7249763 -2049243 + L1PA10 LINE L1 5465 6157 -11 2363 95 13 0 chrX_random 7249948 7250252 -2048754 - AluSq SINE Alu -5 308 1 673 153 57 24 chrX_random 7250391 7250515 -2048491 - FLAM_A SINE Alu -5 137 10 2547 50 0 7 chrX_random 7250529 7250829 -2048177 - AluY SINE Alu -13 298 1 23 0 0 0 chrX_random 7250925 7250948 -2048058 + AT_rich Low_complexity Low_complexity 1 23 0 2200 113 0 10 chrX_random 7251154 7251465 -2047541 - AluSx SINE Alu -4 308 1 2606 43 7 0 chrX_random 7251488 7251788 -2047218 + AluY SINE Alu 1 302 -9 255 360 50 14 chrX_random 7252203 7252342 -2046664 + MIR3 SINE MIR 3 146 -62 1776 172 20 3 chrX_random 7252694 7252991 -2046015 + AluJb SINE Alu 1 302 -10 2121 107 3 17 chrX_random 7253193 7253528 -2045478 + AluSx SINE Alu 1 331 0 257 308 56 47 chrX_random 7253528 7253742 -2045264 - L2 LINE L2 -239 3033 2818 3507 108 10 10 chrX_random 7254756 7255267 -2043739 - MER9 LTR ERVK 0 511 1 476 287 92 56 chrX_random 7255285 7255464 -2043542 + MLT1H LTR MaLR 1 193 -356 2508 61 0 3 chrX_random 7255464 7255761 -2043245 - AluY SINE Alu -15 296 1 476 287 92 56 chrX_random 7255761 7255832 -2043174 + MLT1H LTR MaLR 193 260 -289 2349 93 0 13 chrX_random 7256417 7256719 -2042287 + AluSq SINE Alu 1 298 -15 3565 83 49 10 chrX_random 7257001 7257508 -2041498 + L1PA10 LINE L1 5641 6167 -1 700 244 70 94 chrX_random 7257513 7257927 -2041079 - MLT1H LTR MaLR -38 511 108 2435 75 7 3 chrX_random 7259174 7259480 -2039526 + AluSp SINE Alu 1 307 -6 2197 143 17 3 chrX_random 7259483 7259841 -2039165 - L1MC1 LINE L1 -483 5850 5488 21 0 0 0 chrX_random 7260267 7260288 -2038718 + AT_rich Low_complexity Low_complexity 1 21 0 1722 75 5 0 chrX_random 7260291 7260505 -2038501 + AluSg SINE Alu 1 215 -95 2318 67 37 10 chrX_random 7260704 7261001 -2038005 + AluY SINE Alu 3 307 -4 1781 160 0 29 chrX_random 7261373 7261679 -2037327 + AluJb SINE Alu 1 297 -15 1680 156 16 35 chrX_random 7261973 7262288 -2036718 + AluJo SINE Alu 4 312 0 519 205 68 155 chrX_random 7262455 7262986 -2036020 - MLT1H1 LTR MaLR 0 547 24 193 293 12 61 chrX_random 7263124 7263206 -2035800 - MER5A DNA MER1_type -93 96 19 * 299 192 0 0 chrX_random 7263158 7263210 -2035796 + MER5A DNA MER1_type 138 189 0 2085 119 3 20 chrX_random 7263232 7263535 -2035471 - AluSx SINE Alu -13 299 2 502 230 203 20 chrX_random 7263697 7263845 -2035161 + MER5A DNA MER1_type 1 175 -14 2173 104 37 0 chrX_random 7263845 7264143 -2034863 - AluSp SINE Alu -4 309 1 2111 102 6 50 chrX_random 7264344 7264667 -2034339 + AluSx SINE Alu 1 309 -3 231 308 46 39 chrX_random 7264678 7264808 -2034198 + MIR3 SINE MIR 58 188 -20 281 301 47 62 chrX_random 7265271 7265480 -2033526 - MIR SINE MIR -51 211 3 227 355 9 37 chrX_random 7265593 7265700 -2033306 + MIR SINE MIR 21 124 -84 1292 189 106 0 chrX_random 7265924 7266199 -2032807 + MER2 DNA MER2_type 42 345 0 2391 81 0 3 chrX_random 7266246 7266554 -2032452 + AluSg SINE Alu 1 307 -3 206 150 0 25 chrX_random 7267273 7267313 -2031693 + (GAAAA)n Simple_repeat Simple_repeat 4 42 0 353 250 101 12 chrX_random 7267372 7267540 -2031466 - MER112 DNA MER1_type -7 253 71 1922 95 66 43 chrX_random 7269622 7269926 -2029080 + AluSq SINE Alu 1 311 -2 205 219 27 0 chrX_random 7270068 7270141 -2028865 + (TA)n Simple_repeat Simple_repeat 2 76 0 604 219 183 36 chrX_random 7270529 7270748 -2028258 - Charlie8 DNA MER1_type -2129 288 38 2371 95 0 0 chrX_random 7272006 7272310 -2026696 - AluSg SINE Alu -6 304 1 554 294 81 9 chrX_random 7272720 7272931 -2026075 - MIR SINE MIR -24 238 13 243 204 41 0 chrX_random 7273345 7273394 -2025612 - L2 LINE L2 0 3313 3263 2413 85 0 7 chrX_random 7273472 7273777 -2025229 - AluSg SINE Alu -7 303 1 238 313 138 0 chrX_random 7273932 7274012 -2024994 + L2 LINE L2 3154 3244 -28 207 0 0 0 chrX_random 7274176 7274199 -2024807 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2259 72 3 17 chrX_random 7274202 7274494 -2024512 - AluSp SINE Alu -25 288 1 2326 102 0 0 chrX_random 7274916 7275210 -2023796 - AluSx SINE Alu -18 294 1 249 33 0 0 chrX_random 7275354 7275384 -2023622 + (TAA)n Simple_repeat Simple_repeat 1 30 0 271 303 0 0 chrX_random 7275621 7275697 -2023309 + (TAG)n Simple_repeat Simple_repeat 1 76 0 278 243 139 69 chrX_random 7275756 7275900 -2023106 - MIR SINE MIR -105 157 4 2338 97 0 3 chrX_random 7275963 7276273 -2022733 - AluSc SINE Alu 0 309 1 267 330 115 39 chrX_random 7276311 7276675 -2022331 + L2 LINE L2 2288 2679 -635 196 315 11 45 chrX_random 7276759 7276848 -2022158 + L2 LINE L2 3011 3096 -217 559 150 0 0 chrX_random 7276862 7276942 -2022064 + AluSg/x SINE Alu 210 289 -23 1182 140 135 46 chrX_random 7277203 7277515 -2021491 + MER33 DNA MER1_type 1 319 -5 1922 133 40 0 chrX_random 7277851 7278336 -2020670 - AluSp SINE Alu 0 313 1 486 227 8 17 chrX_random 7278524 7278643 -2020363 - L2 LINE L2 -7 3306 3189 619 101 47 0 chrX_random 7279100 7279359 -2019647 + (TA)n Simple_repeat Simple_repeat 1 271 0 2276 77 14 20 chrX_random 7279361 7279658 -2019348 - AluSq SINE Alu -17 296 2 2052 116 26 17 chrX_random 7279864 7280166 -2018840 - AluSq SINE Alu -8 305 1 2497 208 79 11 chrX_random 7281226 7281797 -2017209 + L1ME2 LINE L1 5554 6163 -1 2667 32 0 13 chrX_random 7282039 7282348 -2016658 + AluY SINE Alu 6 310 -1 1196 300 61 36 chrX_random 7283336 7284263 -2014743 - L2 LINE L2 0 3313 2354 2354 77 0 7 chrX_random 7284345 7284642 -2014364 - AluSg SINE Alu -14 296 2 222 157 235 0 chrX_random 7284968 7285019 -2013987 - L2 LINE L2 -13 3259 3197 2310 112 0 0 chrX_random 7285864 7286167 -2012839 + AluSg SINE Alu 1 303 -7 2511 68 0 10 chrX_random 7286167 7286477 -2012529 + AluSq SINE Alu 1 307 -6 383 290 136 12 chrX_random 7286477 7286639 -2012367 - MIR3 SINE MIR -22 186 5 2245 93 3 50 chrX_random 7287023 7287346 -2011660 + AluSp SINE Alu 1 308 -5 2559 62 0 0 chrX_random 7287693 7287998 -2011008 + AluSp SINE Alu 1 305 -8 21 57 0 0 chrX_random 7288106 7288141 -2010865 + AT_rich Low_complexity Low_complexity 1 35 0 228 184 105 53 chrX_random 7288150 7288226 -2010780 - L1ME4a LINE L1 -86 6035 5956 193 325 0 60 chrX_random 7289018 7289101 -2009905 + L3 LINE CR1 898 975 -602 688 251 190 0 chrX_random 7289230 7289425 -2009581 - MIR SINE MIR -10 252 21 34 0 0 0 chrX_random 7289824 7289858 -2009148 + AT_rich Low_complexity Low_complexity 1 34 0 813 111 34 0 chrX_random 7289859 7289976 -2009030 - L1PA16 LINE L1 -21 6145 6025 1013 246 67 32 chrX_random 7290005 7290350 -2008656 + L3 LINE CR1 989 1345 -232 2491 60 0 7 chrX_random 7290360 7290658 -2008348 - AluY SINE Alu -15 296 1 1520 167 94 11 chrX_random 7290669 7290956 -2008050 - AluJo SINE Alu -1 311 1 2204 109 0 3 chrX_random 7290958 7291252 -2007754 - AluSx SINE Alu -19 293 1 264 186 0 51 chrX_random 7291254 7291313 -2007693 - AluJo SINE Alu -161 141 86 728 213 15 7 chrX_random 7291313 7291449 -2007557 - AluJo SINE Alu -92 220 84 380 314 83 24 chrX_random 7291472 7291641 -2007365 + L3 LINE CR1 1389 1567 -10 650 256 17 34 chrX_random 7291663 7291839 -2007167 + MER5B DNA MER1_type 2 174 -4 213 94 0 0 chrX_random 7292105 7292137 -2006869 + (CA)n Simple_repeat Simple_repeat 1 32 0 2366 110 0 0 chrX_random 7292707 7293015 -2005991 + AluSg SINE Alu 2 309 -1 2194 89 15 58 chrX_random 7293834 7294161 -2004845 - AluSq SINE Alu 0 313 1 1694 139 32 0 chrX_random 7294382 7294634 -2004372 - AluSx SINE Alu -7 305 46 349 309 114 30 chrX_random 7295355 7295556 -2003450 - MIR SINE MIR -4 258 41 224 219 12 0 chrX_random 7345758 7345830 -1953176 - L2 LINE L2 -310 2964 2889 1263 166 221 28 chrX_random 7346162 7346415 -1952591 + AluJo SINE Alu 1 302 0 1134 207 39 35 chrX_random 7346429 7346685 -1952321 - AluJo SINE Alu -21 291 35 919 86 34 37 chrX_random 7346687 7346955 -1952051 + (CCTTG)n Simple_repeat Simple_repeat 1 267 0 792 65 12 71 chrX_random 7347063 7347333 -1951673 + (CAAGG)n Simple_repeat Simple_repeat 1 254 0 739 97 2 74 chrX_random 7347366 7348071 -1950935 + (CAAGG)n Simple_repeat Simple_repeat 1 653 0 624 96 16 69 chrX_random 7348104 7348292 -1950714 + (CAAGG)n Simple_repeat Simple_repeat 2 179 0 730 102 54 41 chrX_random 7348321 7348803 -1950203 + (CAAGG)n Simple_repeat Simple_repeat 1 488 0 783 99 23 60 chrX_random 7348847 7349136 -1949870 + (CAAGG)n Simple_repeat Simple_repeat 1 278 0 321 126 58 19 chrX_random 7349236 7349339 -1949667 + (CAAGG)n Simple_repeat Simple_repeat 1 107 0 517 242 0 0 chrX_random 7349340 7349431 -1949575 - MER7A DNA MER2_type -254 92 4 1203 176 69 8 chrX_random 7349448 7349693 -1949313 + L1MD3 LINE L1 7726 7985 -10 1020 169 113 25 chrX_random 7349851 7349978 -1949028 + L1MD1 LINE L1 5979 6093 -266 4850 138 66 23 chrX_random 7349978 7350770 -1948236 + LTR1B LTR ERV1 1 826 0 1020 169 113 25 chrX_random 7350770 7350884 -1948122 + L1MD1 LINE L1 6093 6358 -1 1582 206 112 60 chrX_random 7351465 7351939 -1947067 + L1MC4 LINE L1 7281 7729 -313 1610 157 75 7 chrX_random 7351939 7352219 -1946787 + AluJb SINE Alu 1 299 -13 1582 206 112 60 chrX_random 7352219 7352355 -1946651 + L1MC4 LINE L1 7729 7927 -115 234 0 0 0 chrX_random 7352355 7352381 -1946625 + (TG)n Simple_repeat Simple_repeat 2 27 0 1582 206 112 60 chrX_random 7352381 7352401 -1946605 + L1MC4 LINE L1 7927 7945 -97 246 348 85 0 chrX_random 7352471 7352589 -1946417 + HAL1 LINE L1 10 137 -2370 1939 158 10 0 chrX_random 7353116 7353419 -1945587 + AluJb SINE Alu 1 306 -6 2571 55 3 0 chrX_random 7357541 7357849 -1941157 - AluY SINE Alu -2 309 1 706 113 64 0 chrX_random 7357988 7358129 -1940877 + MER33 DNA MER1_type 79 228 -96 940 136 0 0 chrX_random 7358130 7358270 -1940736 + AluY SINE Alu 1 140 -171 1738 91 0 0 chrX_random 7358515 7358734 -1940272 - AluSx SINE Alu -44 268 50 1337 154 9 39 chrX_random 7359289 7359522 -1939484 + AluJb SINE Alu 79 304 -8 1855 163 0 10 chrX_random 7361504 7361798 -1937208 - AluJb SINE Alu -21 291 1 971 163 21 32 chrX_random 7362096 7362286 -1936720 - MER58A DNA MER1_type 0 224 37 440 252 0 0 chrX_random 7363729 7363836 -1935170 - MIR SINE MIR -56 206 100 1643 105 0 0 chrX_random 7363937 7364147 -1934859 + AluSg/x SINE Alu 80 289 -23 438 315 115 91 chrX_random 7364485 7364718 -1934288 + L1MEd LINE L1 461 687 -5432 3264 148 22 39 chrX_random 7364718 7365340 -1933666 + LTR9 LTR ERV1 1 612 0 438 315 115 91 chrX_random 7365340 7365567 -1933439 + L1MEd LINE L1 687 907 -5212 3284 109 49 73 chrX_random 7365567 7366182 -1932824 - MER4A LTR ERV1 0 600 1 438 315 115 91 chrX_random 7366182 7366238 -1932768 + L1MEd LINE L1 907 960 -5159 2070 121 0 23 chrX_random 7366238 7366545 -1932461 - AluSx SINE Alu -12 300 1 438 315 115 91 chrX_random 7366545 7366619 -1932387 + L1MEd LINE L1 960 1067 -5052 254 254 15 15 chrX_random 7367100 7367167 -1931839 + GA-rich Low_complexity Low_complexity 2 68 0 1827 167 42 0 chrX_random 7367184 7367472 -1931534 + AluJo SINE Alu 1 300 -12 528 219 44 24 chrX_random 7368573 7368609 -1930397 + MLT1H LTR MaLR 232 266 -283 2347 122 22 17 chrX_random 7368609 7368971 -1930035 - THE1B LTR MaLR 0 364 1 528 219 44 24 chrX_random 7368971 7369132 -1929874 + MLT1H LTR MaLR 266 549 0 655 293 116 52 chrX_random 7369312 7370158 -1928848 + L2 LINE L2 2455 3309 -4 284 186 35 35 chrX_random 7370908 7370994 -1928012 + MLT1H LTR MaLR 459 544 -5 192 242 113 0 chrX_random 7371006 7371068 -1927938 + L2 LINE L2 2678 2746 -568 216 97 0 0 chrX_random 7371156 7371187 -1927819 + (TG)n Simple_repeat Simple_repeat 1 31 0 2442 81 0 0 chrX_random 7372141 7372451 -1926555 - AluSg SINE Alu 0 310 1 445 285 82 58 chrX_random 7372551 7373003 -1926003 + MLT1H LTR MaLR 81 543 -6 4900 161 57 81 chrX_random 7373258 7373333 -1925673 - L1MA9 LINE L1 -282 6030 5955 1440 378 3 10 chrX_random 7373333 7373645 -1925361 - AluSq SINE Alu -3 310 1 4900 161 57 81 chrX_random 7373645 7374022 -1924984 - L1MA9 LINE L1 -357 5955 5570 1468 160 21 83 chrX_random 7374022 7374221 -1924785 - AluJb SINE Alu -7 305 132 2026 98 25 60 chrX_random 7374221 7374537 -1924469 + AluSq SINE Alu 2 306 -7 1468 160 21 83 chrX_random 7374537 7374662 -1924344 - AluJb SINE Alu -180 132 1 4900 161 57 81 chrX_random 7374662 7375787 -1923219 - L1MA9 LINE L1 -742 5570 4419 1407 181 66 35 chrX_random 7375787 7376074 -1922932 - AluJo SINE Alu -16 296 1 4900 161 57 81 chrX_random 7376074 7376255 -1922751 - L1MA9 LINE L1 -1893 4419 4235 2441 91 3 0 chrX_random 7376255 7376563 -1922443 - AluSg SINE Alu -1 309 1 4900 161 57 81 chrX_random 7376563 7376901 -1922105 - L1MA9 LINE L1 -2077 4235 3975 1139 197 29 39 chrX_random 7376908 7377218 -1921788 - L1MA7 LINE L1 -11 6280 5974 7682 35 39 3 chrX_random 7377529 7378946 -1920060 - SVA Other Other -839 1382 31 354 176 71 0 chrX_random 7379527 7379612 -1919394 + L1M4 LINE L1 2452 2542 -3604 9501 175 152 19 chrX_random 7379654 7381342 -1917664 + L1PA13 LINE L1 2 1465 -5332 1934 137 31 3 chrX_random 7381342 7381635 -1917371 - AluSx SINE Alu -11 301 1 9501 175 152 19 chrX_random 7381635 7382112 -1916894 + L1PA13 LINE L1 1465 1878 -4919 1820 155 4 4 chrX_random 7382112 7382390 -1916616 - AluJo SINE Alu -21 291 14 9501 175 152 19 chrX_random 7382390 7382431 -1916575 + L1PA13 LINE L1 1878 2516 -4281 650 162 0 0 chrX_random 7382431 7382530 -1916476 + AluJ/FLAM SINE Alu 1 99 -213 875 243 70 0 chrX_random 7382650 7382942 -1916064 - L1ME LINE L1 -352 5818 5504 233 207 33 58 chrX_random 7382975 7383096 -1915910 + T-rich Low_complexity Low_complexity 4 121 0 2548 53 0 31 chrX_random 7383214 7383535 -1915471 - AluY SINE Alu 0 311 1 331 288 119 0 chrX_random 7384390 7384508 -1914498 + L2 LINE L2 3173 3304 -9 2394 194 64 43 chrX_random 7384709 7385290 -1913716 - MLT1E LTR MaLR 0 593 1 1259 118 168 1 chrX_random 7386828 7387112 -1911894 + MER33 DNA MER1_type 1 324 0 2217 149 60 14 chrX_random 7387821 7388238 -1910768 - L1MB7 LINE L1 -8 6176 5741 430 282 17 8 chrX_random 7388297 7388414 -1910592 - MIR SINE MIR -55 207 90 245 365 27 0 chrX_random 7388466 7388540 -1910466 - MIR SINE MIR -168 94 19 406 401 22 9 chrX_random 7388658 7388880 -1910126 + L3 LINE CR1 444 668 -909 221 354 103 14 chrX_random 7390841 7391064 -1907942 - L2 LINE L2 -353 2961 2719 2344 62 0 42 chrX_random 7391798 7392105 -1906901 - AluY SINE Alu -17 294 1 560 175 103 48 chrX_random 7392462 7392588 -1906418 + FLAM_A SINE Alu 1 133 0 195 314 29 0 chrX_random 7393106 7393176 -1905830 - L2 LINE L2 -11 3302 3231 2500 59 0 0 chrX_random 7393616 7393919 -1905087 + AluY SINE Alu 2 304 -7 407 102 0 0 chrX_random 7393933 7393992 -1905014 + MER33 DNA MER1_type 264 322 -2 31 0 0 0 chrX_random 7394587 7394618 -1904388 + AT_rich Low_complexity Low_complexity 1 31 0 2072 125 0 35 chrX_random 7394676 7394995 -1904011 - AluJo SINE Alu -2 310 3 225 245 0 0 chrX_random 7395822 7395871 -1903135 + CT-rich Low_complexity Low_complexity 2 50 0 1897 120 0 4 chrX_random 7396626 7396892 -1902114 + AluJb SINE Alu 1 265 -47 887 147 0 0 chrX_random 7397054 7397210 -1901796 - AluSg/x SINE Alu 0 309 154 672 173 0 0 chrX_random 7397211 7397321 -1901685 - AluJb SINE Alu -202 110 1 2286 101 0 7 chrX_random 7398327 7398625 -1900381 - AluSx SINE Alu -16 296 1 2276 92 0 10 chrX_random 7399089 7399395 -1899611 - AluSg SINE Alu -7 303 1 1818 56 5 0 chrX_random 7399611 7399826 -1899180 - AluSp SINE Alu -97 216 1 2051 214 66 16 chrX_random 7401651 7402292 -1896714 - L1M LINE L1 -778 5388 4717 825 154 59 0 chrX_random 7402294 7402430 -1896576 - AluJ SINE Alu -14 298 155 880 171 27 7 chrX_random 7402494 7402640 -1896366 - AluJ SINE Alu -163 149 1 3005 223 45 45 chrX_random 7402660 7403735 -1895271 - L1M4 LINE L1 -1447 4699 3625 877 134 134 0 chrX_random 7403735 7403892 -1895114 + L1MC1 LINE L1 6106 6283 -50 1094 253 146 16 chrX_random 7403936 7404086 -1894920 - L1M4 LINE L1 -2519 3627 3498 376 19 38 0 chrX_random 7404086 7404139 -1894867 + (TA)n Simple_repeat Simple_repeat 2 56 0 1094 253 146 16 chrX_random 7404139 7404562 -1894444 - L1M4 LINE L1 -2648 3498 2979 1184 91 178 5 chrX_random 7404686 7404951 -1894055 + THE1B LTR MaLR 1 355 0 2086 99 53 0 chrX_random 7405334 7405617 -1893389 + AluSx SINE Alu 1 298 -14 1919 142 3 35 chrX_random 7405932 7406243 -1892763 - AluJo SINE Alu -11 301 1 359 326 60 38 chrX_random 7406264 7406448 -1892558 - MIR SINE MIR -42 220 33 1995 115 7 11 chrX_random 7406872 7407159 -1891847 - AluSx SINE Alu -26 286 1 1202 182 0 78 chrX_random 7407336 7407578 -1891428 - MER58A DNA MER1_type -1 223 1 24283 31 2 0 chrX_random 7407623 7412486 -1886520 - L1PA4 LINE L1 -3 6152 1283 391 19 39 0 chrX_random 7412656 7412708 -1886298 - L1PA6 LINE L1 -2 6152 6099 1067 42 0 0 chrX_random 7412708 7412850 -1886156 + L1PA5 LINE L1 5929 6070 -84 431 252 9 0 chrX_random 7412870 7412977 -1886029 - MIR SINE MIR -73 189 82 2304 122 0 0 chrX_random 7413473 7413785 -1885221 - AluSx SINE Alu 0 312 1 562 243 21 0 chrX_random 7413863 7414007 -1884999 - MLT1H1 LTR MaLR -2 553 407 3925 204 68 39 chrX_random 7414143 7414471 -1884535 - L1MB7 LINE L1 -16 6168 5851 2426 97 3 0 chrX_random 7414471 7414780 -1884226 - AluSp SINE Alu -3 310 1 3925 204 68 39 chrX_random 7414780 7415098 -1883908 - L1MB7 LINE L1 -333 5851 5544 1832 150 0 0 chrX_random 7415098 7415378 -1883628 + AluJb SINE Alu 3 282 -30 3925 204 68 39 chrX_random 7415378 7415739 -1883267 - L1MB7 LINE L1 -640 5544 5195 2338 79 0 0 chrX_random 7415739 7416047 -1882959 - AluSc SINE Alu 0 308 1 2149 88 35 0 chrX_random 7416049 7416333 -1882673 - AluSq SINE Alu -19 294 1 3925 204 68 39 chrX_random 7416333 7417468 -1881538 - L1MB7 LINE L1 -989 5195 3856 2016 143 109 20 chrX_random 7417468 7417861 -1881145 + MSTA LTR MaLR 1 428 0 3925 204 68 39 chrX_random 7417861 7417997 -1881009 - L1MB7 LINE L1 -2328 3856 3725 1286 163 4 4 chrX_random 7418016 7418243 -1880763 + MLT2B1 LTR ERVL 1 227 -293 1197 212 108 8 chrX_random 7418282 7418753 -1880253 - L1MB7 LINE L1 -2681 3465 2948 229 340 135 40 chrX_random 7418765 7418890 -1880116 - L2 LINE L2 -977 2337 2225 4200 172 77 49 chrX_random 7418890 7419883 -1879123 + LTR28 LTR ERV1 1 1020 0 229 340 135 40 chrX_random 7419883 7420127 -1878879 - L2 LINE L2 -1089 2225 1933 1917 172 87 18 chrX_random 7420401 7420837 -1878169 + MER31B LTR ERV1 1 466 0 261 176 324 0 chrX_random 7420921 7420995 -1878011 + MER39 LTR ERV1 2 99 -608 1412 196 48 33 chrX_random 7421083 7421497 -1877509 + LTR48B LTR ERV1 174 644 0 1365 107 8 0 chrX_random 7421516 7421734 -1877272 - L1PA6 LINE L1 -4 6150 5950 548 296 83 11 chrX_random 7422206 7422483 -1876523 - HAL1 LINE L1 -604 1903 1607 403 152 122 113 chrX_random 7422510 7422532 -1876474 + LTR8 LTR ERV1 1 21 -670 2090 71 49 0 chrX_random 7422532 7422839 -1876167 - AluYa5 SINE Alu 0 320 1 403 152 122 113 chrX_random 7422839 7422996 -1876010 + LTR8 LTR ERV1 21 204 -487 1689 176 56 34 chrX_random 7423010 7423427 -1875579 + LTR8 LTR ERV1 307 691 0 399 252 150 39 chrX_random 7423473 7423520 -1875486 - HAL1 LINE L1 -985 1522 1482 2105 119 3 3 chrX_random 7423520 7423814 -1875192 - AluSq SINE Alu -19 294 1 399 252 150 39 chrX_random 7423814 7424127 -1874879 - HAL1 LINE L1 -1025 1482 1122 1023 98 0 0 chrX_random 7426603 7426736 -1872270 + AluSp SINE Alu 1 133 -180 468 234 117 0 chrX_random 7427904 7428075 -1870931 + L1MC4a LINE L1 5742 5932 -1876 405 102 0 0 chrX_random 7428200 7428208 -1870798 + (TG)n Simple_repeat Simple_repeat 1 67 0 405 102 0 0 chrX_random 7428208 7428267 -1870739 + (TG)n Simple_repeat Simple_repeat 2 60 0 2093 113 6 39 chrX_random 7428294 7428605 -1870401 - AluSg SINE Alu -9 301 1 2297 102 0 7 chrX_random 7429295 7429619 -1869387 + AluSx SINE Alu 1 312 0 2051 117 14 0 chrX_random 7430367 7430657 -1868349 - AluSg SINE Alu -16 294 1 23 0 0 0 chrX_random 7431241 7431264 -1867742 + AT_rich Low_complexity Low_complexity 1 23 0 1717 167 0 23 chrX_random 7431484 7431789 -1867217 - AluJb SINE Alu -14 298 1 970 156 6 62 chrX_random 7432694 7432873 -1866133 + AluJo SINE Alu 2 170 -142 1749 136 34 20 chrX_random 7433003 7433298 -1865708 - AluJb SINE Alu -13 299 1 30 27 0 0 chrX_random 7433367 7433404 -1865602 + AT_rich Low_complexity Low_complexity 1 37 0 2501 63 0 3 chrX_random 7434077 7434379 -1864627 - AluY SINE Alu -10 301 1 934 227 58 110 chrX_random 7434413 7434805 -1864201 - MLT1H LTR MaLR 0 549 185 1883 151 3 20 chrX_random 7434805 7435097 -1863909 - AluJb SINE Alu -17 295 9 934 227 58 110 chrX_random 7435097 7435184 -1863822 - MLT1H LTR MaLR -364 185 95 2160 126 7 3 chrX_random 7435187 7435496 -1863510 - AluJb SINE Alu -2 310 1 275 279 162 0 chrX_random 7435645 7435781 -1863225 - L1ME4a LINE L1 0 6121 5964 23 0 0 0 chrX_random 7436431 7436454 -1862552 + AT_rich Low_complexity Low_complexity 1 23 0 10517 166 38 5 chrX_random 7436793 7437378 -1861628 - L1PA13 LINE L1 -14 6149 5585 1871 146 154 19 chrX_random 7437378 7437755 -1861251 + MSTA LTR MaLR 1 428 0 10517 166 38 5 chrX_random 7437755 7437835 -1861171 - L1PA13 LINE L1 -578 5585 5509 2290 85 0 0 chrX_random 7437835 7438116 -1860890 - AluSg SINE Alu -29 281 1 10517 166 38 5 chrX_random 7438116 7439393 -1859613 - L1PA13 LINE L1 -654 5509 4112 2391 86 3 3 chrX_random 7439393 7439694 -1859312 - AluSg SINE Alu -9 301 1 10517 166 38 5 chrX_random 7439694 7440535 -1858471 - L1PA13 LINE L1 -2051 4112 3300 1410 128 0 5 chrX_random 7440549 7440752 -1858254 - AluSg/x SINE Alu -25 287 86 2110 81 4 7 chrX_random 7441153 7441426 -1857580 - AluY SINE Alu -9 302 31 200 80 0 100 chrX_random 7441753 7441803 -1857203 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 1900 102 80 11 chrX_random 7442170 7442444 -1856562 - AluSx SINE Alu -19 293 1 2588 62 0 0 chrX_random 7442691 7442999 -1856007 - AluY SINE Alu -2 309 2 2350 128 0 0 chrX_random 7443221 7443533 -1855473 - AluSx SINE Alu 0 312 1 418 205 41 8 chrX_random 7444703 7444825 -1854181 - L1MC5 LINE L1 -117 7844 7719 228 176 0 20 chrX_random 7445296 7445347 -1853659 + (CAA)n Simple_repeat Simple_repeat 2 51 0 671 169 69 0 chrX_random 7445481 7445611 -1853395 + MER33 DNA MER1_type 2 140 -184 248 111 19 0 chrX_random 7446373 7446427 -1852579 + (CAAA)n Simple_repeat Simple_repeat 2 56 0 2506 37 7 3 chrX_random 7448107 7448401 -1850605 + AluY SINE Alu 2 296 -15 1373 96 0 0 chrX_random 7448401 7448579 -1850427 + AluSp SINE Alu 134 311 -2 253 309 103 48 chrX_random 7448658 7448823 -1850183 - MIR SINE MIR -50 212 39 407 158 79 0 chrX_random 7448860 7449025 -1849981 + (TA)n Simple_repeat Simple_repeat 1 178 0 2138 112 7 0 chrX_random 7449053 7449348 -1849658 - AluSx SINE Alu -15 297 1 206 398 64 23 chrX_random 7449723 7449894 -1849112 - MIR3 SINE MIR -17 191 14 2349 89 3 0 chrX_random 7450812 7451116 -1847890 + AluSp SINE Alu 1 305 -8 235 372 83 16 chrX_random 7451530 7451651 -1847355 - MIR SINE MIR -61 147 19 24 0 0 0 chrX_random 7451691 7451715 -1847291 + AT_rich Low_complexity Low_complexity 1 24 0 2514 74 3 0 chrX_random 7451716 7452026 -1846980 - AluSp SINE Alu -2 311 1 522 301 107 5 chrX_random 7452164 7452360 -1846646 - MIR SINE MIR -44 218 3 2037 138 14 0 chrX_random 7453363 7453653 -1845353 + AluSx SINE Alu 1 294 -18 189 0 0 0 chrX_random 7453813 7453834 -1845172 + (TA)n Simple_repeat Simple_repeat 1 21 0 1805 178 4 0 chrX_random 7453834 7454115 -1844891 - AluJo SINE Alu -30 282 1 319 277 39 82 chrX_random 7454133 7454262 -1844744 - L2 LINE L2 -1291 2023 1907 2485 65 0 0 chrX_random 7454262 7454554 -1844452 - AluSc SINE Alu -17 292 1 319 277 39 82 chrX_random 7454554 7454655 -1844351 - L2 LINE L2 -1407 1907 1803 2333 90 0 10 chrX_random 7456731 7457030 -1841976 + AluSc SINE Alu 1 296 -13 21 36 0 0 chrX_random 7457288 7457316 -1841690 + AT_rich Low_complexity Low_complexity 1 28 0 253 333 17 85 chrX_random 7457994 7458171 -1840835 + MIR3 SINE MIR 41 205 -3 190 302 0 32 chrX_random 7458817 7458880 -1840126 + MIR SINE MIR 201 261 -1 262 308 15 62 chrX_random 7458936 7459066 -1839940 - L3 LINE CR1 -2 1575 1452 800 296 108 78 chrX_random 7459129 7459721 -1839285 - L3 LINE CR1 -313 1264 655 300 256 53 111 chrX_random 7459731 7459938 -1839068 - MIR3 SINE MIR -6 202 8 27 62 0 0 chrX_random 7460117 7460165 -1838841 + AT_rich Low_complexity Low_complexity 1 48 0 254 383 42 33 chrX_random 7460186 7460426 -1838580 - L3 LINE CR1 -1203 374 133 192 152 0 0 chrX_random 7460790 7460823 -1838183 + T-rich Low_complexity Low_complexity 1 33 0 814 267 37 24 chrX_random 7460961 7461376 -1837630 - L1MEd LINE L1 -974 1516 988 2150 120 7 0 chrX_random 7462510 7462802 -1836204 + AluSx SINE Alu 1 294 -18 186 308 154 0 chrX_random 7463816 7463946 -1835060 - MIR SINE MIR -12 250 101 636 266 73 40 chrX_random 7464188 7464436 -1834570 - MIR SINE MIR -6 256 1 299 232 141 0 chrX_random 7464539 7464638 -1834368 + L1MC5 LINE L1 7826 7938 -23 2419 80 0 10 chrX_random 7464699 7465010 -1833996 + AluSg SINE Alu 1 308 -2 191 316 0 0 chrX_random 7466031 7466088 -1832918 - L2 LINE L2 -213 3059 3003 198 346 0 0 chrX_random 7466232 7466284 -1832722 + L2 LINE L2 3102 3153 -119 32 26 0 0 chrX_random 7466652 7466691 -1832315 + AT_rich Low_complexity Low_complexity 1 39 0 2306 101 3 0 chrX_random 7467937 7468243 -1830763 - AluSx SINE Alu -5 307 1 201 156 0 0 chrX_random 7470034 7470066 -1828940 + (CTA)n Simple_repeat Simple_repeat 3 34 0 24 53 0 0 chrX_random 7470227 7470265 -1828741 + AT_rich Low_complexity Low_complexity 1 38 0 874 75 33 48 chrX_random 7470872 7471159 -1827847 + (CCTTG)n Simple_repeat Simple_repeat 1 282 0 629 80 0 101 chrX_random 7471206 7471405 -1827601 + (CCTTG)n Simple_repeat Simple_repeat 1 179 0 832 84 31 57 chrX_random 7471426 7472772 -1826234 + (CCTTG)n Simple_repeat Simple_repeat 1 1311 0 755 116 9 70 chrX_random 7472806 7473473 -1825533 + (CCTTG)n Simple_repeat Simple_repeat 1 626 0 731 95 31 61 chrX_random 7473500 7474249 -1824757 + (CCTTG)n Simple_repeat Simple_repeat 1 726 0 955 92 15 51 chrX_random 7474269 7474866 -1824140 + (CCTTG)n Simple_repeat Simple_repeat 1 761 0 549 112 0 87 chrX_random 7474878 7475074 -1823932 + (CCTTG)n Simple_repeat Simple_repeat 1 179 0 921 36 5 78 chrX_random 7475104 7475296 -1823710 + (CCTTG)n Simple_repeat Simple_repeat 1 178 0 841 83 0 80 chrX_random 7475315 7475596 -1823410 + (CCTTG)n Simple_repeat Simple_repeat 1 258 0 665 82 0 92 chrX_random 7475611 7475806 -1823200 + (CCTTG)n Simple_repeat Simple_repeat 2 178 0 907 78 0 83 chrX_random 7475825 7476413 -1822593 + (CCTTG)n Simple_repeat Simple_repeat 2 716 0 989 93 15 68 chrX_random 7476443 7478638 -1820368 + (CCTTG)n Simple_repeat Simple_repeat 1 2257 0 675 82 0 87 chrX_random 7478674 7478870 -1820136 + (CCTTG)n Simple_repeat Simple_repeat 2 180 0 841 97 17 56 chrX_random 7478927 7479308 -1819698 + (CCTTG)n Simple_repeat Simple_repeat 1 366 0 834 115 22 51 chrX_random 7479346 7480462 -1818544 + (CCTTG)n Simple_repeat Simple_repeat 1 1083 0 424 134 58 35 chrX_random 7480476 7480597 -1818409 + (CCTTG)n Simple_repeat Simple_repeat 2 130 -46 1714 73 0 9 chrX_random 7480597 7480817 -1818189 - AluY SINE Alu -11 300 83 424 134 58 35 chrX_random 7480817 7480866 -1818140 + (CCTTG)n Simple_repeat Simple_repeat 130 176 0 619 111 28 69 chrX_random 7480880 7481252 -1817754 + (CCTTG)n Simple_repeat Simple_repeat 1 356 0 676 107 0 73 chrX_random 7481300 7481687 -1817319 + (CCTTG)n Simple_repeat Simple_repeat 1 358 0 884 73 32 49 chrX_random 7481715 7482129 -1816877 + (CCTTG)n Simple_repeat Simple_repeat 1 406 0 499 118 56 45 chrX_random 7482158 7482336 -1816670 + (CCTTG)n Simple_repeat Simple_repeat 1 180 0 712 82 0 82 chrX_random 7482377 7482573 -1816433 + (CCTTG)n Simple_repeat Simple_repeat 1 180 0 645 82 0 93 chrX_random 7482610 7482804 -1816202 + (CCTTG)n Simple_repeat Simple_repeat 2 177 0 737 96 16 59 chrX_random 7482818 7483005 -1816001 + (CCTTG)n Simple_repeat Simple_repeat 1 179 0 640 115 47 46 chrX_random 7483047 7483396 -1815610 + (CCTTG)n Simple_repeat Simple_repeat 1 349 0 576 81 75 46 chrX_random 7483429 7483603 -1815403 + (CCTTG)n Simple_repeat Simple_repeat 1 179 0 700 95 5 69 chrX_random 7483674 7483863 -1815143 + (CCTTG)n Simple_repeat Simple_repeat 1 177 0 759 93 16 55 chrX_random 7483894 7484077 -1814929 + (CCTTG)n Simple_repeat Simple_repeat 1 176 0 628 113 0 77 chrX_random 7484105 7484299 -1814707 + (CCTTG)n Simple_repeat Simple_repeat 2 180 0 270 129 71 29 chrX_random 7484313 7484383 -1814623 + (CCTTG)n Simple_repeat Simple_repeat 1 73 0 321 142 90 15 chrX_random 7484402 7484536 -1814470 + (CCTTG)n Simple_repeat Simple_repeat 5 148 0 722 98 23 64 chrX_random 7484553 7485082 -1813924 + (CCTTG)n Simple_repeat Simple_repeat 1 507 0 568 126 23 56 chrX_random 7485093 7485373 -1813633 + (CCTTG)n Simple_repeat Simple_repeat 1 270 0 628 129 19 65 chrX_random 7485412 7485881 -1813125 + (CCTTG)n Simple_repeat Simple_repeat 1 447 0 689 79 13 84 chrX_random 7485932 7486191 -1812815 + (CCTTG)n Simple_repeat Simple_repeat 1 240 0 811 66 0 82 chrX_random 7486204 7486400 -1812606 + (CCTTG)n Simple_repeat Simple_repeat 1 180 0 760 115 26 59 chrX_random 7486422 7486869 -1812137 + (CCTTG)n Simple_repeat Simple_repeat 1 432 0 745 103 2 75 chrX_random 7486923 7487365 -1811641 + (CCTTG)n Simple_repeat Simple_repeat 1 409 0 780 87 61 33 chrX_random 7487381 7487688 -1811318 + (CCTTG)n Simple_repeat Simple_repeat 1 315 0 671 92 16 65 chrX_random 7487700 7487884 -1811122 + (CCTTG)n Simple_repeat Simple_repeat 3 177 0 1345 226 7 14 chrX_random 7487951 7488226 -1810780 - AluJo SINE Alu -39 273 1 1858 124 6 64 chrX_random 7488467 7488781 -1810225 + AluJo SINE Alu 1 296 -16 315 267 0 0 chrX_random 7488990 7489065 -1809941 - L2 LINE L2 -3 3310 3236 650 233 86 14 chrX_random 7489468 7489678 -1809328 + L1ME3 LINE L1 5922 6146 -16 1801 170 31 0 chrX_random 7490636 7490930 -1808076 - AluJb SINE Alu -9 303 1 819 70 0 0 chrX_random 7491158 7491258 -1807748 - AluSp/q SINE Alu -16 297 198 2550 47 0 3 chrX_random 7491416 7491716 -1807290 - AluY SINE Alu -12 299 1 1944 134 0 4 chrX_random 7491979 7492256 -1806750 + AluJb SINE Alu 1 276 -36 360 0 0 0 chrX_random 7492263 7492303 -1806703 + (TAAA)n Simple_repeat Simple_repeat 4 43 0 351 265 26 17 chrX_random 7492381 7492498 -1806508 - MER5B DNA MER1_type 0 178 61 1250 169 0 0 chrX_random 7492882 7493065 -1805941 + AluJo SINE Alu 5 187 -125 906 198 0 12 chrX_random 7493310 7493477 -1805529 + AluJb SINE Alu 140 304 -8 1478 142 0 0 chrX_random 7493508 7493720 -1805286 + AluSg/x SINE Alu 82 293 -17 1867 178 57 0 chrX_random 7493720 7494069 -1804937 - L1MA9 LINE L1 -177 6135 5767 1028 156 0 12 chrX_random 7494381 7494548 -1804458 - FRAM SINE Alu 0 166 2 390 185 131 4 chrX_random 7494879 7495020 -1803986 - L1MD3 LINE L1 -2 7987 6200 1929 198 88 39 chrX_random 7495588 7495723 -1803283 - L1MA10 LINE L1 0 6334 6207 318 87 0 0 chrX_random 7495723 7495769 -1803237 + (TG)n Simple_repeat Simple_repeat 2 47 0 1577 151 12 23 chrX_random 7495778 7496036 -1802970 - AluJo SINE Alu -47 265 11 1929 198 88 39 chrX_random 7496036 7496086 -1802920 - L1MA10 LINE L1 -134 6200 6154 1758 126 0 0 chrX_random 7496086 7496333 -1802673 + AluSx SINE Alu 57 303 -9 1929 198 88 39 chrX_random 7496333 7496622 -1802384 - L1MA10 LINE L1 -180 6154 5825 2233 114 13 0 chrX_random 7496625 7496933 -1802073 - AluSq SINE Alu -1 312 1 646 284 0 5 chrX_random 7497234 7497431 -1801575 + MIR SINE MIR 67 262 0 5569 213 48 26 chrX_random 7497472 7498010 -1800996 + L1M4 LINE L1 2474 2999 -3147 2054 141 7 7 chrX_random 7498010 7498316 -1800690 + AluSx SINE Alu 1 306 -6 5569 213 48 26 chrX_random 7498316 7499305 -1799701 + L1M4 LINE L1 2999 4034 -2112 1743 166 72 33 chrX_random 7499305 7499667 -1799339 + MSTA LTR MaLR 26 401 -27 459 35 0 0 chrX_random 7499709 7499766 -1799240 + (TC)n Simple_repeat Simple_repeat 2 58 0 186 43 0 0 chrX_random 7499765 7499788 -1799218 + (TG)n Simple_repeat Simple_repeat 2 24 0 * 6259 109 36 3 chrX_random 7499794 7500140 -1798866 - L1PB1 LINE L1 -2 6149 5816 270 0 0 0 chrX_random 7500140 7500170 -1798836 + (TG)n Simple_repeat Simple_repeat 2 31 0 6259 109 36 3 chrX_random 7500170 7501045 -1797961 - L1PB1 LINE L1 -335 5816 4891 346 71 0 0 chrX_random 7501045 7501087 -1797919 + MSTA LTR MaLR 386 427 -1 4921 138 42 15 chrX_random 7501087 7501617 -1797389 + L1MA8 LINE L1 4796 5310 -981 2041 107 47 23 chrX_random 7501617 7501917 -1797089 - AluSx SINE Alu -5 307 1 4921 138 42 15 chrX_random 7501917 7502541 -1796465 + L1MA8 LINE L1 5310 6119 -172 757 132 0 52 chrX_random 7502541 7502677 -1796329 + FLAM_C SINE Alu 1 129 -4 4921 138 42 15 chrX_random 7502677 7502855 -1796151 + L1MA8 LINE L1 6119 6291 0 1958 145 142 16 chrX_random 7503542 7503922 -1795084 - MSTA LTR MaLR 0 428 1 1869 157 20 13 chrX_random 7506805 7507104 -1791902 + AluJo SINE Alu 1 301 -11 1385 122 31 0 chrX_random 7507342 7507538 -1791468 + AluJo SINE Alu 87 288 -24 549 238 85 16 chrX_random 7507735 7507924 -1791082 + L1MC5 LINE L1 7723 7924 -37 1975 140 13 3 chrX_random 7507942 7508242 -1790764 - AluJo SINE Alu -9 303 1 194 332 195 16 chrX_random 7711008 7711198 -1587808 - L2 LINE L2 -1358 1956 1733 644 252 20 75 chrX_random 7711315 7711569 -1587437 + L2 LINE L2 3074 3313 0 27 0 0 0 chrX_random 7712749 7712776 -1586230 + AT_rich Low_complexity Low_complexity 1 27 0 206 286 11 22 chrX_random 7713157 7713248 -1585758 + GA-rich Low_complexity Low_complexity 1 90 0 333 0 0 0 chrX_random 7714284 7714321 -1584685 + (CA)n Simple_repeat Simple_repeat 1 37 0 709 309 88 34 chrX_random 7715954 7716283 -1582723 + L1MEc LINE L1 1376 1734 -4662 2790 13 0 0 chrX_random 7716283 7716590 -1582416 - AluY SINE Alu -4 307 1 709 309 88 34 chrX_random 7716590 7716678 -1582328 + L1MEc LINE L1 1734 1816 -4580 1530 43 0 5 chrX_random 7716745 7716932 -1582074 + L1PA3 LINE L1 5968 6153 -2 24 32 0 0 chrX_random 7716932 7716963 -1582043 + AT_rich Low_complexity Low_complexity 1 31 0 201 340 145 49 chrX_random 7717043 7717834 -1581172 - L2 LINE L2 -463 2851 1985 325 96 0 0 chrX_random 7717934 7717986 -1581020 + L1PA14 LINE L1 6107 6158 -3 7742 177 12 23 chrX_random 7717994 7718240 -1580766 - L1M1 LINE L1 -602 5703 5456 2118 128 0 3 chrX_random 7718240 7718536 -1580470 + AluSx SINE Alu 3 297 -15 7742 177 12 23 chrX_random 7718536 7720395 -1578611 - L1M1 LINE L1 -849 5456 3622 1285 243 41 0 chrX_random 7720394 7720736 -1578270 - L1M1 LINE L1 -3210 2936 2581 * 788 116 6 43 chrX_random 7720746 7720910 -1578096 - L1 LINE L1 -1531 6034 5877 750 103 0 175 chrX_random 7721016 7721151 -1577855 - L1 LINE L1 -4998 2567 2485 2455 124 16 3 chrX_random 7721151 7721539 -1577467 - L1PB1 LINE L1 -8 6143 5751 750 103 0 175 chrX_random 7721539 7721626 -1577380 - L1 LINE L1 -5080 2485 2384 4084 184 18 0 chrX_random 7721632 7722367 -1576639 - L1 LINE L1 -5857 1708 961 1566 107 0 14 chrX_random 7722467 7722683 -1576323 - AluSp SINE Alu -21 292 80 8221 170 28 17 chrX_random 7722998 7724557 -1574449 + MSTA-int LTR MaLR 77 1651 0 2366 144 41 19 chrX_random 7724557 7724973 -1574033 + MSTA LTR MaLR 1 425 -3 3271 165 7 13 chrX_random 7725562 7726245 -1572761 + L1MA4 LINE L1 4660 5338 -808 2341 134 20 10 chrX_random 7726348 7726752 -1572254 + L1MA4 LINE L1 5879 6286 -14 22 88 0 0 chrX_random 7726754 7726811 -1572195 + AT_rich Low_complexity Low_complexity 1 57 0 22 0 0 0 chrX_random 7726933 7726955 -1572051 + AT_rich Low_complexity Low_complexity 1 22 0 552 333 35 6 chrX_random 7727355 7727526 -1571480 + L3 LINE CR1 1389 1564 -13 759 197 48 21 chrX_random 7729266 7729454 -1569552 - THE1C LTR MaLR -182 193 1 6607 91 0 0 chrX_random 7729500 7730600 -1568406 - L1PA12 LINE L1 0 6168 5069 359 363 35 6 chrX_random 7730602 7730773 -1568233 - L1MC/D LINE L1 -2030 5778 5603 838 225 34 11 chrX_random 7731118 7731296 -1567710 - MER5A DNA MER1_type 0 189 8 239 114 23 0 chrX_random 7731956 7732000 -1567006 + (TA)n Simple_repeat Simple_repeat 2 46 0 595 347 71 63 chrX_random 7732140 7732619 -1566387 - L2 LINE L2 -16 3256 2775 223 259 0 17 chrX_random 7732716 7732774 -1566232 - L2 LINE L2 0 3272 3216 976 264 65 45 chrX_random 7732881 7733263 -1565743 + MLT1B LTR MaLR 1 390 0 380 302 168 0 chrX_random 7733315 7733464 -1565542 - L3 LINE CR1 -45 1532 1359 274 337 22 31 chrX_random 7733988 7734176 -1564830 + MIR SINE MIR 6 191 -65 4019 243 87 19 chrX_random 7734221 7734573 -1564433 + L1M4 LINE L1 19 346 -6194 375 23 0 0 chrX_random 7734573 7734617 -1564389 + (CA)n Simple_repeat Simple_repeat 2 45 0 4019 243 87 19 chrX_random 7734617 7735454 -1563552 + L1M4 LINE L1 346 1289 -5251 3779 214 16 43 chrX_random 7735494 7736941 -1562065 + L1M4 LINE L1 4692 6101 -467 243 160 40 0 chrX_random 7737058 7737108 -1561898 + L1M4 LINE L1 6176 6227 -345 * 12895 187 17 33 chrX_random 7737106 7739807 -1559199 + L1M1 LINE L1 13 2670 -4895 1023 147 78 15 chrX_random 7739807 7740011 -1558995 - THE1C LTR MaLR 0 375 159 9615 174 34 11 chrX_random 7740024 7741704 -1557302 + L1P3 LINE L1 10 1727 -4734 233 289 111 0 chrX_random 7742908 7742998 -1556008 - L2 LINE L2 -11 3261 3162 452 297 231 6 chrX_random 7743397 7743579 -1555427 + MIR SINE MIR 31 253 -9 997 215 122 4 chrX_random 7743624 7743870 -1555136 + Charlie1b DNA MER1_type 16 290 -233 5007 93 13 0 chrX_random 7743874 7744569 -1554437 - L1PA10 LINE L1 -4 6164 5461 2807 96 5 0 chrX_random 7744569 7744966 -1554040 - L1P LINE L1 -5672 474 76 4617 24 2 0 chrX_random 7744967 7745504 -1553502 + L1PA4 LINE L1 5614 6151 -4 17650 146 21 14 chrX_random 7746346 7748302 -1550704 - L1PA10 LINE L1 -662 5469 3529 2792 19 0 0 chrX_random 7748302 7748613 -1550393 + AluYa5 SINE Alu 1 311 0 17650 146 21 14 chrX_random 7748613 7749544 -1549462 - L1PA10 LINE L1 -2602 3529 2549 2260 133 28 0 chrX_random 7749544 7749898 -1549108 - THE1B LTR MaLR 0 364 1 17650 146 21 14 chrX_random 7749898 7750474 -1548532 - L1PA10 LINE L1 -3582 2549 1979 25024 123 7 7 chrX_random 7750574 7754577 -1544429 + L1PA8 LINE L1 1379 5380 -766 1949 82 0 25 chrX_random 7754577 7754853 -1544153 + L1PA8 LINE L1 5897 6169 -3 256 312 81 98 chrX_random 7754949 7755308 -1543698 + L2 LINE L2 2826 3178 -94 918 158 42 12 chrX_random 7755449 7755614 -1543392 - THE1C LTR MaLR -205 170 1 6236 178 44 21 chrX_random 7755614 7757007 -1541999 + L1MA2 LINE L1 2666 4135 -3430 1584 195 13 16 chrX_random 7757007 7757320 -1541686 - AluJb SINE Alu 0 312 1 6236 178 44 21 chrX_random 7757320 7758278 -1540728 + L1MA2 LINE L1 4135 5069 -2496 5735 40 1 0 chrX_random 7758279 7758979 -1540027 + L1PA3 LINE L1 4391 5091 -1055 7207 35 1 0 chrX_random 7759079 7759939 -1539067 + L1PA3 LINE L1 5287 6147 -8 225 65 0 0 chrX_random 7759943 7759974 -1539032 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 8462 152 10 10 chrX_random 7759974 7762533 -1536473 + L1MA2 LINE L1 5095 7658 -65 1347 148 0 0 chrX_random 7762530 7762732 -1536274 - THE1-int LTR MaLR -827 753 552 * 1788 133 61 21 chrX_random 7762731 7763061 -1535945 + L1MA2 LINE L1 5901 6243 -61 * 5887 116 4 1 chrX_random 7763059 7763894 -1535112 + THE1C-int LTR MaLR 744 1580 0 2667 95 0 19 chrX_random 7763898 7764276 -1534730 + THE1C LTR MaLR 5 375 0 5923 235 54 48 chrX_random 7764280 7765534 -1533472 + L1MD1 LINE L1 2276 3521 -2694 993 243 58 9 chrX_random 7765534 7765760 -1533246 + MER8 DNA MER2_type 1 237 -2 5923 235 54 48 chrX_random 7765760 7766976 -1532030 + L1MD1 LINE L1 3521 4723 -1492 1779 186 49 3 chrX_random 7766976 7767325 -1531681 - MLT1A1 LTR MaLR 0 365 1 5923 235 54 48 chrX_random 7767325 7767415 -1531591 + L1MD1 LINE L1 4723 4811 -1404 396 287 63 21 chrX_random 7767534 7767771 -1531235 + MER41B LTR ERV1 184 430 -205 4230 215 31 22 chrX_random 7767989 7769397 -1529609 + L1MD1 LINE L1 4818 6232 -79 1895 103 67 36 chrX_random 7769397 7769728 -1529278 - Tigger1 DNA MER2_type 0 2418 2078 225 0 0 0 chrX_random 7769728 7769753 -1529253 + (TTTC)n Simple_repeat Simple_repeat 4 28 0 920 189 17 0 chrX_random 7769827 7770007 -1528999 - Tigger1 DNA MER2_type -325 2093 1911 878 244 11 21 chrX_random 7770402 7770685 -1528321 + AluSx SINE Alu 1 280 -32 207 0 0 0 chrX_random 7770685 7770708 -1528298 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 12100 132 14 4 chrX_random 7770708 7772556 -1526450 - Tigger1 DNA MER2_type -529 1889 24 370 97 0 0 chrX_random 7772582 7772644 -1526362 + L1MD2 LINE L1 6297 6358 -1 355 202 12 12 chrX_random 7772963 7773047 -1525959 + HsTC2 DNA Tc2 1 84 -1814 885 291 82 48 chrX_random 7773722 7774430 -1524576 + L1MEd LINE L1 482 1213 -4906 5166 145 37 21 chrX_random 7774530 7775371 -1523635 - L1M1 LINE L1 -6666 899 46 8850 44 2 2 chrX_random 7775375 7776431 -1522575 - MER11C LTR ERVK -14 1057 2 194 361 39 31 chrX_random 7776868 7776998 -1522008 - L2 LINE L2 -221 3051 2921 273 214 10 92 chrX_random 7778859 7778957 -1520049 + MIR3 SINE MIR 110 199 -9 182 349 35 23 chrX_random 7779040 7779126 -1519880 - L2 LINE L2 -2894 420 334 676 281 65 5 chrX_random 7779526 7779725 -1519281 + MIR SINE MIR 2 212 -50 350 270 15 95 chrX_random 7779872 7779943 -1519063 + MIR SINE MIR 12 69 -193 2084 87 18 0 chrX_random 7779943 7780260 -1518746 - AluY SINE Alu 0 322 1 350 270 15 95 chrX_random 7780260 7780324 -1518682 + MIR SINE MIR 69 137 -125 666 280 0 33 chrX_random 7781571 7781753 -1517253 - MER5A DNA MER1_type -3 186 11 643 264 65 25 chrX_random 7782860 7783136 -1515870 - L1MC4a LINE L1 -1846 5962 5676 28 0 0 0 chrX_random 7783292 7783320 -1515686 + AT_rich Low_complexity Low_complexity 1 28 0 394 311 22 15 chrX_random 7783636 7783771 -1515235 - MLT1I LTR MaLR -75 334 199 426 297 72 18 chrX_random 7783948 7784170 -1514836 - L1MC4a LINE L1 -548 5622 5389 514 252 55 1 chrX_random 7784195 7784435 -1514571 - L1MC4a LINE L1 -735 5427 5214 439 391 10 5 chrX_random 7784464 7784661 -1514345 - L3b LINE CR1 -241 1342 1145 252 372 6 19 chrX_random 7785202 7785358 -1513648 - L3 LINE CR1 -740 837 684 434 292 0 23 chrX_random 7785841 7785971 -1513035 + L3 LINE CR1 1345 1471 -106 328 219 64 64 chrX_random 7786084 7786209 -1512797 - L1ME4a LINE L1 -71 6050 5923 466 84 0 14 chrX_random 7786209 7786280 -1512726 - L1PA8 LINE L1 -3 6169 6100 328 219 64 64 chrX_random 7786280 7786373 -1512633 - L1ME4a LINE L1 -197 5924 5832 231 269 115 11 chrX_random 7786492 7786674 -1512332 - L1MC4 LINE L1 -1 8041 7841 312 181 106 44 chrX_random 7786751 7786902 -1512104 - L1MA10 LINE L1 -5 6161 6008 1927 155 44 22 chrX_random 7787217 7787584 -1511422 - THE1C LTR MaLR 0 375 1 9324 134 21 30 chrX_random 7787584 7789176 -1509830 - THE1C-int LTR MaLR 0 1580 4 4479 228 40 58 chrX_random 7789305 7791587 -1507419 - L1P3 LINE L1 -4147 2314 1 697 167 17 33 chrX_random 7791601 7791781 -1507225 + Charlie1 DNA MER1_type 2524 2700 -61 2063 216 73 10 chrX_random 7792102 7792592 -1506414 - L1ME1 LINE L1 -10 6156 5636 10323 184 22 6 chrX_random 7793054 7794212 -1504794 - L1PB1 LINE L1 0 6151 5013 2399 68 7 3 chrX_random 7794212 7794522 -1504484 - AluY SINE Alu 0 311 1 10323 184 22 6 chrX_random 7794522 7796429 -1502577 - L1PB1 LINE L1 -1138 5013 3037 3787 77 0 0 chrX_random 7796439 7796933 -1502073 - L1PA7 LINE L1 0 6154 5661 10489 136 6 0 chrX_random 7796935 7798614 -1500392 + L1PA8A LINE L1 3385 5073 -1073 1126 58 0 0 chrX_random 7798583 7798722 -1500284 + L1PA5 LINE L1 6000 6138 -16 * 342 0 0 0 chrX_random 7798722 7798760 -1500246 + (TA)n Simple_repeat Simple_repeat 1 38 0 4524 79 8 0 chrX_random 7798764 7799374 -1499632 + L1PA8A LINE L1 5318 5932 -199 1942 211 38 43 chrX_random 7799344 7799952 -1499054 + L1MA7 LINE L1 2949 3553 -2593 * 5297 145 15 63 chrX_random 7799951 7800121 -1498885 + L1MA7 LINE L1 5163 5340 -951 3610 108 11 2 chrX_random 7800121 7800659 -1498347 + L1PA13 LINE L1 5616 6159 -4 5297 145 15 63 chrX_random 7800659 7801643 -1497363 + L1MA7 LINE L1 5340 6291 0 251 217 19 85 chrX_random 7801693 7801799 -1497207 + L1ME4a LINE L1 4456 4554 -1592 876 274 116 11 chrX_random 7801799 7802153 -1496853 + L2 LINE L2 1979 2369 -945 624 279 68 90 chrX_random 7802156 7802511 -1496495 + L2 LINE L2 2952 3298 -15 2402 194 59 10 chrX_random 7802514 7803025 -1495981 - MER44D DNA MER2_type 0 605 15 367 333 33 58 chrX_random 7803069 7803429 -1495577 + L1ME4a LINE L1 4582 4932 -1214 1278 287 101 15 chrX_random 7803535 7804140 -1494866 - L1MC4a LINE L1 -361 5803 5260 1070 186 79 0 chrX_random 7804506 7804721 -1494285 + MER46A DNA MER2_type 5 236 0 266 125 21 0 chrX_random 7804721 7804769 -1494237 + L1MC4 LINE L1 7993 8041 -1 1016 291 54 47 chrX_random 7804981 7805538 -1493468 + L1ME4a LINE L1 5258 5818 -303 746 227 45 0 chrX_random 7805635 7805811 -1493195 - L1MB4 LINE L1 -184 5996 5813 3797 94 11 2 chrX_random 7805988 7806531 -1492475 - L1PA13 LINE L1 0 6163 5616 655 103 22 59 chrX_random 7806558 7806694 -1492312 + L1MB4 LINE L1 6044 6174 -6 307 253 148 30 chrX_random 7806699 7806901 -1492105 + L1ME4a LINE L1 5884 6109 -12 203 244 0 0 chrX_random 7807422 7807463 -1491543 - L2 LINE L2 -67 3246 3206 * 269 315 27 60 chrX_random 7807456 7807605 -1491401 - L2 LINE L2 -229 3043 2900 532 296 46 135 chrX_random 7808865 7809474 -1489532 + MLT1K LTR MaLR 34 588 0 295 286 0 0 chrX_random 7809864 7809927 -1489079 + MIR SINE MIR 12 74 -188 756 247 35 0 chrX_random 7810035 7810209 -1488797 + MIR SINE MIR 82 261 -1 522 284 28 57 chrX_random 7810242 7810453 -1488553 + MIR3 SINE MIR 1 205 -3 353 295 149 0 chrX_random 7810486 7810623 -1488383 - MIR SINE MIR -50 212 49 5243 127 14 5 chrX_random 7811549 7812411 -1486595 - L1MA4A LINE L1 -8 6295 5426 21 0 0 0 chrX_random 7813369 7813390 -1485616 + AT_rich Low_complexity Low_complexity 1 21 0 4787 201 28 37 chrX_random 7814608 7815874 -1483132 - L1MD1 LINE L1 0 6636 5397 590 186 10 0 chrX_random 7815874 7815976 -1483030 - U6 snRNA snRNA -2 105 3 4787 201 28 37 chrX_random 7815976 7816472 -1482534 - L1MD1 LINE L1 -1239 5397 4898 1275 247 65 33 chrX_random 7816483 7817026 -1481980 - L1MD1 LINE L1 -4698 1842 1283 29942 121 15 62 chrX_random 7817078 7823087 -1475919 + L1P3 LINE L1 12 5730 -424 3071 156 63 10 chrX_random 7823574 7823642 -1475364 - L1MA7 LINE L1 -278 6022 5959 1401 132 36 0 chrX_random 7823642 7823893 -1475113 - L1MA8 LINE L1 -1 6290 6031 3071 156 63 10 chrX_random 7823893 7824482 -1474524 - L1MA7 LINE L1 -341 5959 5296 * 5301 106 11 33 chrX_random 7824477 7825328 -1473678 - L1PB1 LINE L1 0 6151 5320 675 155 12 84 chrX_random 7825336 7825478 -1473528 - MLT1A2 LTR MaLR -55 341 185 3203 129 2 0 chrX_random 7825483 7825981 -1473025 - L1PA8A LINE L1 0 6147 5693 13206 202 36 13 chrX_random 7825989 7830042 -1468964 - L1PBa LINE L1 -819 6043 1898 2999 54 0 0 chrX_random 7830049 7830422 -1468584 - L1PA5 LINE L1 -5 6149 5777 231 36 0 0 chrX_random 7830422 7830450 -1468556 + (TTTTC)n Simple_repeat Simple_repeat 3 30 0 2666 77 31 19 chrX_random 7830450 7830854 -1468152 - LTR7 LTR ERV1 -43 407 1 2380 96 50 13 chrX_random 7830854 7831230 -1467776 - HERVH LTR ERV1 0 7713 7324 1291 146 0 0 chrX_random 7831224 7831423 -1467583 - HERVH LTR ERV1 -1889 5824 5626 * 38358 63 43 1 chrX_random 7831424 7836961 -1462045 - L1P2 LINE L1 -369 5785 11 10147 166 34 25 chrX_random 7836970 7838862 -1460144 - L1PBa LINE L1 -4948 1915 6 7975 231 106 33 chrX_random 7838860 7839854 -1459152 - L1M4 LINE L1 -812 6294 5374 * 1346 138 5 0 chrX_random 7839854 7840071 -1458935 - L1PB1 LINE L1 0 6151 5934 7975 231 106 33 chrX_random 7840071 7843043 -1455963 - L1M4 LINE L1 -1732 5374 2621 2692 105 3 0 chrX_random 7843043 7843406 -1455600 - THE1B LTR MaLR 0 364 1 9882 113 53 12 chrX_random 7843406 7844925 -1454081 - THE1B-int LTR MaLR 0 1580 1 2558 122 0 0 chrX_random 7844927 7845289 -1453717 - THE1B LTR MaLR -2 362 1 7975 231 106 33 chrX_random 7845289 7847423 -1451583 - L1M4 LINE L1 -4485 2621 10 267 163 0 0 chrX_random 7848559 7848608 -1450398 - MLT2B2 LTR ERVL -5 515 467 234 192 0 0 chrX_random 7848611 7848663 -1450343 + (TA)n Simple_repeat Simple_repeat 1 52 0 * 243 0 0 0 chrX_random 7848662 7848689 -1450317 + (GA)n Simple_repeat Simple_repeat 2 28 0 2150 204 9 16 chrX_random 7848689 7849129 -1449877 - MLT2B2 LTR ERVL -39 476 40 283 254 0 0 chrX_random 7849157 7849224 -1449782 - MIR SINE MIR 0 262 196 284 203 39 39 chrX_random 7849333 7849486 -1449520 + (TATAA)n Simple_repeat Simple_repeat 1 153 0 26 50 0 0 chrX_random 7849578 7849618 -1449388 + AT_rich Low_complexity Low_complexity 1 40 0 811 230 57 73 chrX_random 7849618 7849866 -1449140 + MLT2B1 LTR ERVL 275 518 -2 810 279 86 31 chrX_random 7849866 7850450 -1448556 + L1ME4a LINE L1 5391 6006 -115 9261 202 35 12 chrX_random 7850548 7853669 -1445337 - L1MA9 LINE L1 -40 6272 3082 711 232 13 13 chrX_random 7853746 7853897 -1445109 + FRAM SINE Alu 1 151 -25 669 200 7 7 chrX_random 7853907 7854062 -1444944 - L1MA10 LINE L1 -11 6323 6169 372 243 113 28 chrX_random 7854073 7854250 -1444756 - L1ME1 LINE L1 -165 6395 6204 5261 164 29 10 chrX_random 7854252 7854779 -1444227 + L1MA8 LINE L1 4958 5474 -817 2059 182 71 0 chrX_random 7854779 7855174 -1443832 - MSTA LTR MaLR -1 427 5 5261 164 29 10 chrX_random 7855174 7855957 -1443049 + L1MA8 LINE L1 5474 6288 -3 5272 194 54 19 chrX_random 7855967 7857282 -1441724 - L1ME1 LINE L1 -1060 5480 4213 1999 173 32 88 chrX_random 7857282 7857815 -1441191 + MLT1D LTR MaLR 3 505 0 5272 194 54 19 chrX_random 7857815 7859829 -1439177 - L1ME1 LINE L1 -2327 4213 1927 1076 284 71 34 chrX_random 7859829 7860659 -1438347 - L1ME LINE L1 -3940 2456 1596 1769 148 47 27 chrX_random 7860674 7861039 -1437967 - L1MA9 LINE L1 -159 6153 5782 210 171 0 0 chrX_random 7861039 7861080 -1437926 + (TATG)n Simple_repeat Simple_repeat 2 42 0 241 162 81 54 chrX_random 7861104 7861178 -1437828 - L1MC4 LINE L1 -1339 6703 6628 * 828 142 14 14 chrX_random 7861146 7861294 -1437712 - L1MA9 LINE L1 -526 5786 5639 1646 168 55 33 chrX_random 7861296 7861659 -1437347 + THE1C LTR MaLR 3 373 -2 5973 132 4 54 chrX_random 7861663 7862697 -1436309 + THE1C-int LTR MaLR 3 984 -596 652 274 101 36 chrX_random 7862686 7863275 -1435731 - L1ME LINE L1 -5041 1164 693 * 425 313 62 10 chrX_random 7863608 7863800 -1435206 - L1ME LINE L1 -6140 256 55 1884 144 0 54 chrX_random 7863843 7864156 -1434850 - AluSg SINE Alu -14 296 1 22 35 0 0 chrX_random 7864386 7864415 -1434591 + AT_rich Low_complexity Low_complexity 1 29 0 230 329 58 31 chrX_random 7865215 7865440 -1433566 + L2 LINE L2 2071 2301 -1013 13188 75 3 7 chrX_random 7865797 7867502 -1431504 + HERVL-A1 LTR ERVL 646 2343 -3311 * 17898 70 2 14 chrX_random 7867499 7869807 -1429199 + HERVL-A1 LTR ERVL 3374 5654 0 2958 86 58 2 chrX_random 7869809 7870226 -1428780 + MLT2A1 LTR ERVL 3 442 -2 2030 136 46 0 chrX_random 7870231 7870577 -1428429 + L1P LINE L1 4730 5091 -1055 329 155 0 0 chrX_random 8070577 8070635 -1228371 - MLT2B3 LTR ERVL -496 58 1 3470 202 66 16 chrX_random 8071760 8072802 -1226204 + L1MA7 LINE L1 5011 6095 -196 346 222 91 51 chrX_random 8072979 8073151 -1225855 - MIR SINE MIR -62 146 19 2116 136 0 0 chrX_random 8073178 8073487 -1225519 - AluSx SINE Alu 0 312 4 307 349 71 0 chrX_random 8073886 8074012 -1224994 - MIR3 SINE MIR -25 183 49 903 217 4 71 chrX_random 8074125 8074365 -1224641 - MER58A DNA MER1_type 0 224 1 347 357 65 22 chrX_random 8074418 8074603 -1224403 + L2 LINE L2 3079 3271 -1 269 227 91 11 chrX_random 8075679 8075767 -1223239 + L2 LINE L2 2916 3010 -262 201 276 92 40 chrX_random 8075745 8075821 -1223185 + L2 LINE L2 2722 2801 -513 * 402 257 20 10 chrX_random 8075838 8075939 -1223067 + MER94 DNA DNA 19 120 -14 504 308 86 4 chrX_random 8075949 8076183 -1222823 + L2 LINE L2 2809 3061 -252 411 282 70 36 chrX_random 8076812 8077113 -1221893 - L1ME LINE L1 -544 5626 5316 571 367 33 20 chrX_random 8077465 8078065 -1220941 + L1MEc LINE L1 112 719 -5677 650 296 41 75 chrX_random 8078169 8078514 -1220492 + MLT1H LTR MaLR 126 458 -91 184 359 0 0 chrX_random 8079110 8079188 -1219818 - MIR SINE MIR -73 135 58 258 56 0 0 chrX_random 8080692 8080728 -1218278 + (CA)n Simple_repeat Simple_repeat 1 36 0 2070 232 52 21 chrX_random 8080947 8081577 -1217429 + L1ME1 LINE L1 5318 5967 -199 3318 187 12 0 chrX_random 8081597 8082190 -1216816 + Charlie3 DNA MER1_type 2 601 -2109 14247 183 22 18 chrX_random 8082295 8086726 -1212280 + L1MA4A LINE L1 119 4583 -2422 1309 181 56 38 chrX_random 8086726 8086842 -1212164 + AluJb SINE Alu 3 115 -197 244 0 56 0 chrX_random 8086842 8086878 -1212128 + (CAA)n Simple_repeat Simple_repeat 2 39 0 1309 181 56 38 chrX_random 8086878 8087049 -1211957 + AluJb SINE Alu 115 295 -17 14247 183 22 18 chrX_random 8087049 8089480 -1209526 + L1MA4A LINE L1 4583 7004 -1 295 338 95 7 chrX_random 8090152 8090300 -1208706 + L2 LINE L2 2820 2980 -333 293 265 59 0 chrX_random 8090329 8090397 -1208609 + MIR SINE MIR 1 72 -190 21 36 0 0 chrX_random 8090545 8090573 -1208433 + AT_rich Low_complexity Low_complexity 1 28 0 13901 190 23 9 chrX_random 8090683 8094242 -1204764 - L1MA4 LINE L1 -4 6478 2856 1864 179 0 0 chrX_random 8094242 8094543 -1204463 + AluJb SINE Alu 1 301 -11 13901 190 23 9 chrX_random 8094543 8094938 -1204068 - L1MA4 LINE L1 -3626 2856 2468 195 162 0 0 chrX_random 8095033 8095070 -1203936 + A-rich Low_complexity Low_complexity 4 40 0 23 0 0 0 chrX_random 8095685 8095708 -1203298 + GC_rich Low_complexity Low_complexity 1 23 0 6429 190 62 40 chrX_random 8095796 8098271 -1200735 - L1MA4 LINE L1 -3847 2481 4 1111 171 46 37 chrX_random 8099479 8099696 -1199310 + MER20 DNA MER1_type 1 219 0 189 107 0 0 chrX_random 8100417 8100445 -1198561 + (TG)n Simple_repeat Simple_repeat 1 28 0 3605 129 7 2 chrX_random 8101314 8101878 -1197128 - L1PA16 LINE L1 0 6166 5600 1475 174 11 14 chrX_random 8102213 8102494 -1196512 - L1MA9 LINE L1 -440 5872 5593 239 259 0 0 chrX_random 8102536 8102594 -1196412 - MLT1E2 LTR MaLR 0 626 569 785 150 0 29 chrX_random 8102594 8102734 -1196272 - L1MA9 LINE L1 -701 5611 5476 989 249 51 42 chrX_random 8102738 8103071 -1195935 + L1MA9 LINE L1 5939 6274 -38 564 183 10 0 chrX_random 8103245 8103349 -1195657 + FLAM_A SINE Alu 28 132 -10 217 331 55 31 chrX_random 8103811 8103938 -1195068 + L2 LINE L2 3143 3272 0 245 263 0 0 chrX_random 8104109 8104187 -1194819 + MIR SINE MIR 58 135 -73 1105 280 39 62 chrX_random 8104783 8105247 -1193759 - MLT1H LTR MaLR -91 458 6 455 151 0 0 chrX_random 8105395 8105481 -1193525 - L1M3 LINE L1 -731 5437 5352 22 80 0 0 chrX_random 8105651 8105701 -1193305 + AT_rich Low_complexity Low_complexity 1 50 0 386 212 0 0 chrX_random 8105745 8105830 -1193176 - L1M3 LINE L1 -732 5436 5352 264 272 0 25 chrX_random 8105824 8105905 -1193101 - L1M3e LINE L1 -5408 1622 1544 * 3008 222 42 30 chrX_random 8105916 8106054 -1192952 - L1ME1 LINE L1 -50 6116 5981 18971 102 14 11 chrX_random 8106054 8107875 -1191131 - Charlie3 DNA MER1_type 0 2706 872 2203 86 20 30 chrX_random 8107875 8108177 -1190829 - AluSx SINE Alu -13 299 1 18971 102 14 11 chrX_random 8108177 8109051 -1189955 - Charlie3 DNA MER1_type -1834 872 2 3008 222 42 30 chrX_random 8109051 8109856 -1189150 - L1MA7 LINE L1 -185 5981 5164 1593 170 55 30 chrX_random 8109853 8110182 -1188824 + L1MA7 LINE L1 5955 6291 0 * 684 210 105 24 chrX_random 8110189 8110437 -1188569 - L1ME1 LINE L1 -973 5173 4906 447 90 34 34 chrX_random 8110461 8110550 -1188456 - L1MA4 LINE L1 -1 6299 6211 980 86 26 0 chrX_random 8110589 8110740 -1188266 + L1M LINE L1 5263 5417 -883 330 263 51 15 chrX_random 8110748 8110885 -1188121 - L1MC5 LINE L1 -516 7445 7304 1559 245 25 59 chrX_random 8111010 8111308 -1187698 - L1MC4 LINE L1 -733 7228 6986 2032 104 7 31 chrX_random 8111308 8111632 -1187374 - AluSx SINE Alu 0 317 1 1559 245 25 59 chrX_random 8111632 8111917 -1187089 - L1MC4 LINE L1 -975 6986 6693 25 0 0 0 chrX_random 8113919 8113944 -1185062 + AT_rich Low_complexity Low_complexity 1 25 0 30 27 0 0 chrX_random 8114057 8114094 -1184912 + AT_rich Low_complexity Low_complexity 1 37 0 240 302 16 0 chrX_random 8114360 8114423 -1184583 - L2 LINE L2 -6 3307 3244 310 353 43 24 chrX_random 8114466 8114673 -1184333 - MIR SINE MIR -19 243 33 233 374 71 16 chrX_random 8114689 8114871 -1184135 - L2 LINE L2 -247 3025 2834 1704 200 96 38 chrX_random 8114916 8115415 -1183591 - L1ME1 LINE L1 -4 6162 5635 4151 288 77 27 chrX_random 8115419 8117687 -1181319 - L1MEc LINE L1 -3980 2416 36 1180 257 67 97 chrX_random 8117939 8118786 -1180220 + L1ME3 LINE L1 5293 6114 -48 1459 177 31 40 chrX_random 8118865 8119192 -1179814 - MER33 DNA MER1_type 0 324 1 370 311 33 0 chrX_random 8119496 8119618 -1179388 + MIR SINE MIR 124 249 -13 237 313 12 12 chrX_random 8119616 8119696 -1179310 - L2 LINE L2 -4 3309 3230 * 973 105 8 0 chrX_random 8120269 8120402 -1178604 - AluSq SINE Alu -16 297 164 540 108 0 0 chrX_random 8120402 8120476 -1178530 - AluSq SINE Alu -238 74 1 2495 212 50 5 chrX_random 8120478 8121054 -1177952 - L1ME2 LINE L1 -13 6151 5550 203 156 0 0 chrX_random 8121167 8121199 -1177807 + (TG)n Simple_repeat Simple_repeat 1 32 0 476 304 114 14 chrX_random 8121213 8121570 -1177436 - MLT2E LTR ERVL -71 557 109 359 310 99 46 chrX_random 8121825 8122170 -1176836 - L1ME2 LINE L1 -748 5398 5036 242 351 140 18 chrX_random 8122245 8122359 -1176647 - L2 LINE L2 -1 3271 3144 877 154 22 41 chrX_random 8122489 8122715 -1176291 - L1MA8 LINE L1 -1 6290 6081 1180 237 77 16 chrX_random 8123738 8124050 -1174956 - MLT1H LTR MaLR 0 549 219 270 56 0 0 chrX_random 8124307 8124343 -1174663 + (CA)n Simple_repeat Simple_repeat 2 37 0 188 346 73 59 chrX_random 8125340 8125476 -1173530 - MIR SINE MIR -105 157 20 585 278 104 13 chrX_random 8125698 8125928 -1173078 - MER5C DNA MER1_type -47 277 27 265 284 95 0 chrX_random 8126058 8126174 -1172832 + L1MC4a LINE L1 5920 6046 -1762 545 235 32 21 chrX_random 8126174 8126361 -1172645 + L1MC4 LINE L1 7702 7890 -152 279 277 0 50 chrX_random 8126368 8126469 -1172537 + L1MC4 LINE L1 7943 8038 -4 1983 149 0 7 chrX_random 8127407 8127715 -1171291 - AluJb SINE Alu -6 306 1 799 225 16 0 chrX_random 8130631 8130813 -1168193 + MIR SINE MIR 8 192 -70 1267 216 153 3 chrX_random 8132367 8132700 -1166306 - MLT1B LTR MaLR -3 387 5 737 256 10 5 chrX_random 8133226 8133267 -1165739 - MER3 DNA MER1_type 0 209 170 1836 167 39 6 chrX_random 8133267 8133603 -1165403 + MER7A DNA MER2_type 1 345 -1 737 256 10 5 chrX_random 8133603 8133760 -1165246 - MER3 DNA MER1_type -39 170 10 207 304 29 14 chrX_random 8134078 8134147 -1164859 + L2 LINE L2 3142 3211 -61 442 258 31 93 chrX_random 8134185 8134410 -1164596 - MIR SINE MIR -51 211 1 300 349 76 0 chrX_random 8134733 8134865 -1164141 - L2 LINE L2 -7 3265 3124 340 291 40 112 chrX_random 8135077 8135355 -1163651 + MIR SINE MIR 5 262 0 194 331 167 23 chrX_random 8135845 8136041 -1162965 + L2 LINE L2 2175 2420 -894 1160 165 0 76 chrX_random 8136041 8136278 -1162728 + MER20 DNA MER1_type 1 219 0 194 331 167 23 chrX_random 8136278 8136344 -1162662 + L2 LINE L2 2420 2475 -839 278 349 11 58 chrX_random 8136713 8136902 -1162104 + L2 LINE L2 2914 3093 -179 189 0 0 0 chrX_random 8136916 8136937 -1162069 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 764 180 0 0 chrX_random 8136937 8137059 -1161947 - FRAM SINE Alu -32 144 23 206 300 160 20 chrX_random 8137087 8137187 -1161819 + L2 LINE L2 3150 3263 -9 225 253 44 44 chrX_random 8137253 8137344 -1161662 - LTR33 LTR ERVL -8 513 423 203 0 37 0 chrX_random 8137465 8137492 -1161514 + (GA)n Simple_repeat Simple_repeat 1 28 0 621 245 19 13 chrX_random 8137516 8137675 -1161331 - LTR33 LTR ERVL -361 160 1 288 366 108 14 chrX_random 8137675 8137888 -1161118 + MIR SINE MIR 6 238 -24 267 264 215 0 chrX_random 8139625 8139746 -1159260 - MIR SINE MIR -14 248 102 6717 97 23 9 chrX_random 8139767 8140756 -1158250 - L1MA1 LINE L1 0 6302 5300 20096 159 45 21 chrX_random 8140759 8143562 -1155444 - L1 LINE L1 -2681 4884 2149 2351 92 0 0 chrX_random 8143562 8143854 -1155152 + AluSx SINE Alu 1 292 -20 20096 159 45 21 chrX_random 8143854 8144458 -1154548 - L1 LINE L1 -5416 2149 1561 1204 43 12 12 chrX_random 8144458 8144620 -1154386 - L1PA13 LINE L1 0 6163 6002 20096 159 45 21 chrX_random 8144620 8145969 -1153037 - L1 LINE L1 -6004 1561 16 1777 260 93 10 chrX_random 8145976 8146472 -1152534 + L2 LINE L2 2284 2820 -494 403 258 57 16 chrX_random 8146455 8146579 -1152427 + L2 LINE L2 3185 3313 0 * 460 298 102 19 chrX_random 8147090 8147295 -1151711 - L3b LINE CR1 -254 1329 1108 450 203 152 7 chrX_random 8148723 8148861 -1150145 + MER3 DNA MER1_type 1 158 -51 25 51 0 0 chrX_random 8148876 8148915 -1150091 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chrX_random 8149056 8149077 -1149929 + AT_rich Low_complexity Low_complexity 1 21 0 1741 167 6 32 chrX_random 8149348 8149659 -1149347 - AluJb SINE Alu -9 303 1 1824 122 87 32 chrX_random 8149696 8150041 -1148965 - THE1B LTR MaLR 0 364 1 1355 265 157 9 chrX_random 8150252 8150693 -1148313 - MLT1G1 LTR MaLR -9 586 81 314 189 244 11 chrX_random 8150913 8151003 -1148003 - MER5A DNA MER1_type 0 189 79 805 204 35 6 chrX_random 8151031 8151203 -1147803 - L1PA16 LINE L1 -9 6157 5981 1131 160 1 5 chrX_random 8151303 8151523 -1147483 - L1PA16 LINE L1 -384 5772 5559 268 284 102 0 chrX_random 8151834 8151922 -1147084 + MER91C DNA MER1_type 14 110 -30 23 24 0 24 chrX_random 8152422 8152446 -1146560 + AT_rich Low_complexity Low_complexity 1 25 -15 2170 27 0 4 chrX_random 8152446 8152705 -1146301 - L1PA3 LINE L1 0 6155 5898 23 24 0 24 chrX_random 8152705 8152721 -1146285 + AT_rich Low_complexity Low_complexity 25 40 0 1537 266 68 34 chrX_random 8153083 8153614 -1145392 - MLT1H LTR MaLR 0 549 1 367 356 63 11 chrX_random 8153871 8154045 -1144961 + L2 LINE L2 3131 3313 0 1446 165 150 9 chrX_random 8154141 8154468 -1144538 + THE1C LTR MaLR 3 375 0 10746 108 1 42 chrX_random 8154468 8156115 -1142891 + THE1C-int LTR MaLR 1 1580 0 1595 167 52 75 chrX_random 8156115 8156499 -1142507 + THE1C LTR MaLR 1 375 0 1531 217 28 14 chrX_random 8158709 8159069 -1139937 + MLT1A1 LTR MaLR 1 365 0 444 269 8 15 chrX_random 8159517 8159651 -1139355 + MER94 DNA DNA 2 134 0 327 349 93 47 chrX_random 8159651 8160207 -1138799 + L2 LINE L2 2280 2861 -453 1001 180 64 9 chrX_random 8160439 8160672 -1138334 - L1ME2 LINE L1 0 6164 5919 344 323 39 46 chrX_random 8161254 8161384 -1137622 + L2 LINE L2 3184 3312 -1 331 344 0 41 chrX_random 8162244 8162366 -1136640 + MIR3 SINE MIR 78 194 -14 295 286 40 32 chrX_random 8165658 8165784 -1133222 + MER5A DNA MER1_type 2 139 -50 350 230 157 47 chrX_random 8165878 8166058 -1132948 + MIR SINE MIR 1 262 0 508 252 170 7 chrX_random 8166327 8166474 -1132532 - MER5A DNA MER1_type -6 183 13 529 328 100 12 chrX_random 8167793 8168052 -1130954 - MLT1H LTR MaLR -200 349 68 494 161 21 0 chrX_random 8168182 8168275 -1130731 - MER53 DNA DNA -2 187 93 268 155 26 112 chrX_random 8168315 8168431 -1130575 - MER53 DNA DNA -83 106 1 1508 201 16 57 chrX_random 8168980 8169348 -1129658 - MLT1E3 LTR MaLR -6 618 266 180 0 0 0 chrX_random 8169408 8169428 -1129578 + (TTG)n Simple_repeat Simple_repeat 2 21 0 758 253 0 6 chrX_random 8169432 8169594 -1129412 - AluJo SINE Alu -30 282 122 485 212 44 9 chrX_random 8169606 8169719 -1129287 - MLT1E3 LTR MaLR -506 118 2 2126 125 0 7 chrX_random 8169719 8170022 -1128984 + AluSx SINE Alu 1 301 -11 2280 112 0 0 chrX_random 8170166 8170478 -1128528 - AluSx SINE Alu 0 312 1 22 0 0 0 chrX_random 8170677 8170699 -1128307 + AT_rich Low_complexity Low_complexity 1 22 0 1952 86 36 13 chrX_random 8170940 8171244 -1127762 - L1MA2 LINE L1 0 6304 5994 381 239 0 0 chrX_random 8172232 8172299 -1126707 + L2 LINE L2 3235 3301 -12 704 252 89 5 chrX_random 8172301 8172515 -1126491 - MIR SINE MIR -12 250 19 185 376 51 25 chrX_random 8172505 8172662 -1126344 - MIR SINE MIR -101 161 1 * 2784 177 7 18 chrX_random 8172696 8173256 -1125750 - L1MB2 LINE L1 0 6171 5618 1595 146 42 3 chrX_random 8174163 8174450 -1124556 - L1MA3 LINE L1 0 6305 6008 16303 165 24 11 chrX_random 8174458 8175742 -1123264 - L1M1 LINE L1 -4741 2824 1558 1979 140 56 8 chrX_random 8175742 8176100 -1122906 + THE1C LTR MaLR 1 375 0 16303 165 24 11 chrX_random 8176100 8177448 -1121558 - L1M1 LINE L1 -6007 1558 153 2185 118 0 3 chrX_random 8177448 8177754 -1121252 + AluSx SINE Alu 1 305 -7 16303 165 24 11 chrX_random 8177754 8177899 -1121107 - L1M1 LINE L1 -7412 153 11 21 57 0 0 chrX_random 8178367 8178402 -1120604 + AT_rich Low_complexity Low_complexity 1 35 0 21 71 0 0 chrX_random 8178468 8178510 -1120496 + AT_rich Low_complexity Low_complexity 1 42 0 448 279 56 20 chrX_random 8178652 8178903 -1120103 - L1MC4 LINE L1 -144 7898 7639 1992 119 6 19 chrX_random 8178924 8179243 -1119763 + L1PA13 LINE L1 5833 6147 -16 530 45 0 0 chrX_random 8179243 8179309 -1119697 - AluSp/q SINE Alu -18 295 230 2143 92 0 0 chrX_random 8179309 8179580 -1119426 - AluSx SINE Alu -41 271 1 795 294 98 33 chrX_random 8179670 8180119 -1118887 - LTR33 LTR ERVL -7 514 37 434 279 126 66 chrX_random 8180171 8180504 -1118502 - L1M4 LINE L1 -2848 3298 2946 2271 109 0 0 chrX_random 8180644 8180946 -1118060 + AluSx SINE Alu 11 312 0 422 306 17 35 chrX_random 8181436 8181609 -1117397 + MIR SINE MIR 64 233 -29 229 280 22 174 chrX_random 8181986 8182261 -1116745 + MIR SINE MIR 20 252 -10 3136 27 3 0 chrX_random 8184545 8184917 -1114089 + L1PA4 LINE L1 5783 6155 0 516 329 95 42 chrX_random 8185228 8185900 -1113106 - L2 LINE L2 -1 3312 2596 199 288 121 15 chrX_random 8185891 8185957 -1113049 - MIR SINE MIR -94 114 42 * 575 282 32 91 chrX_random 8186000 8186252 -1112754 - MIR SINE MIR 0 262 26 729 286 53 57 chrX_random 8186290 8186552 -1112454 + MIR SINE MIR 2 262 0 199 389 63 8 chrX_random 8187426 8187552 -1111454 - MIR SINE MIR -55 153 21 668 273 34 0 chrX_random 8187673 8187849 -1111157 - MIR SINE MIR -10 252 71 210 147 0 0 chrX_random 8187964 8187998 -1111008 + (CA)n Simple_repeat Simple_repeat 1 34 0 296 266 9 28 chrX_random 8188137 8188246 -1110760 + CT-rich Low_complexity Low_complexity 4 110 0 2191 99 3 13 chrX_random 8189636 8189807 -1109199 - AluSg SINE Alu -11 299 128 270 0 0 0 chrX_random 8189807 8189837 -1109169 + (TTCA)n Simple_repeat Simple_repeat 3 32 0 2101 106 0 3 chrX_random 8189837 8190119 -1108887 - AluY SINE Alu -28 283 3 2191 99 3 13 chrX_random 8190119 8190248 -1108758 - AluSg SINE Alu -180 130 1 270 184 67 0 chrX_random 8190351 8190749 -1108257 + (TA)n Simple_repeat Simple_repeat 1 424 0 426 165 21 31 chrX_random 8190762 8190859 -1108147 + L1MA10 LINE L1 6236 6331 -3 27 29 0 0 chrX_random 8190879 8190913 -1108093 + AT_rich Low_complexity Low_complexity 1 34 0 476 88 75 6 chrX_random 8190922 8191081 -1107925 + (TA)n Simple_repeat Simple_repeat 1 170 0 242 281 55 16 chrX_random 8191365 8191493 -1107513 + L1ME LINE L1 5677 5809 -312 2281 147 36 54 chrX_random 8191615 8192057 -1106949 - MER57B LTR ERV1 0 434 1 1523 105 230 198 chrX_random 8192057 8192658 -1106348 - MER57B-int LTR ERV1 0 7537 6918 2603 108 55 0 chrX_random 8192710 8193090 -1105916 - MER57B-int LTR ERV1 -597 6940 6540 * 3319 89 40 2 chrX_random 8193086 8193536 -1105470 - MER57B-int LTR ERV1 -7070 467 1 2806 137 7 0 chrX_random 8193540 8193962 -1105044 - MER57B LTR ERV1 -9 425 1 252 209 75 0 chrX_random 8194360 8194427 -1104579 + MIR SINE MIR 97 168 -94 1847 181 151 3 chrX_random 8194591 8194955 -1104051 + MER47B DNA MER2_type 1 418 0 408 378 111 14 chrX_random 8194969 8195392 -1103614 + L2 LINE L2 2298 2761 -553 409 249 65 43 chrX_random 8195455 8195640 -1103366 - MER112 DNA MER1_type -7 253 65 191 357 54 18 chrX_random 8195831 8195943 -1103063 + L2 LINE L2 2945 3060 -212 206 341 24 0 chrX_random 8196116 8196198 -1102808 + MIR3 SINE MIR 125 208 0 1744 104 0 0 chrX_random 8197301 8197523 -1101483 + AluSx SINE Alu 64 285 -27 220 171 0 0 chrX_random 8197537 8197572 -1101434 - L2 LINE L2 -92 3221 3187 30 45 0 0 chrX_random 8197792 8197836 -1101170 + AT_rich Low_complexity Low_complexity 1 44 0 25 31 0 0 chrX_random 8198130 8198162 -1100844 + AT_rich Low_complexity Low_complexity 1 32 0 2106 109 0 10 chrX_random 8198162 8198456 -1100550 + AluSq SINE Alu 1 291 -22 276 353 215 13 chrX_random 8198456 8198768 -1100238 - L3 LINE CR1 -149 1428 1054 566 247 114 34 chrX_random 8200003 8200327 -1098679 - HAL1b LINE L1 -133 1215 866 22 0 0 0 chrX_random 8200574 8200596 -1098410 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chrX_random 8200821 8200842 -1098164 + AT_rich Low_complexity Low_complexity 1 21 0 266 210 34 17 chrX_random 8200981 8201100 -1097906 + (TATATG)n Simple_repeat Simple_repeat 3 123 0 879 256 97 14 chrX_random 8201101 8201472 -1097534 - HAL1b LINE L1 -598 750 349 333 295 0 11 chrX_random 8201960 8202055 -1096951 + L1MC4 LINE L1 6610 6703 -1339 267 210 0 0 chrX_random 8202056 8202110 -1096896 + (TA)n Simple_repeat Simple_repeat 1 57 -5 2416 98 138 0 chrX_random 8202110 8202486 -1096520 - MSTA LTR MaLR 0 428 1 267 210 0 0 chrX_random 8202486 8202493 -1096513 + (TA)n Simple_repeat Simple_repeat 56 62 0 1999 128 0 10 chrX_random 8202493 8202798 -1096208 + MER4D LTR ERV1 1 302 -601 2195 105 3 0 chrX_random 8202798 8203124 -1095882 + AluSq SINE Alu 1 327 0 4478 118 17 18 chrX_random 8203125 8203834 -1095172 + MER4D LTR ERV1 196 903 0 498 307 84 36 chrX_random 8203851 8204102 -1094904 + L1MEc LINE L1 137 399 -5997 885 222 140 0 chrX_random 8204250 8204457 -1094549 + MLT1G1 LTR MaLR 360 595 0 855 236 29 14 chrX_random 8205245 8205453 -1093553 - MER20 DNA MER1_type -8 211 1 324 309 98 31 chrX_random 8205974 8206333 -1092673 + L1ME4a LINE L1 5357 5739 -382 5553 61 1 3 chrX_random 8206663 8207367 -1091639 - L1PA7 LINE L1 0 6154 5452 357 286 30 38 chrX_random 8207619 8207752 -1091254 + L1ME4a LINE L1 5780 5911 -210 577 193 37 0 chrX_random 8207780 8207889 -1091117 + FLAM_A SINE Alu 8 120 -22 264 30 0 0 chrX_random 8207902 8207935 -1091071 + (CA)n Simple_repeat Simple_repeat 2 34 0 2137 118 0 37 chrX_random 8208428 8208750 -1090256 + AluSx SINE Alu 3 312 0 596 191 95 0 chrX_random 8209331 8209457 -1089549 + MER5A DNA MER1_type 1 138 -51 414 361 48 0 chrX_random 8210140 8210348 -1088658 - MIR SINE MIR -27 235 18 328 200 0 15 chrX_random 8210629 8210694 -1088312 - MER5B DNA MER1_type -110 68 5 3412 146 30 32 chrX_random 8212071 8212647 -1086359 + L1MB7 LINE L1 5518 6094 -90 1430 194 0 0 chrX_random 8212647 8212884 -1086122 - MER8 DNA MER2_type 0 239 3 3412 146 30 32 chrX_random 8212884 8212966 -1086040 + L1MB7 LINE L1 6094 6175 -9 309 26 0 0 chrX_random 8213357 8213395 -1085611 + (TG)n Simple_repeat Simple_repeat 1 38 0 337 252 14 41 chrX_random 8215245 8215392 -1083614 + L1MC4 LINE L1 6849 6991 -1051 25 51 0 0 chrX_random 8215630 8215669 -1083337 + AT_rich Low_complexity Low_complexity 1 39 0 3875 124 78 20 chrX_random 8216107 8216799 -1082207 - L1PA16 LINE L1 0 6166 5435 603 164 48 25 chrX_random 8216825 8217040 -1081966 + L1 LINE L1 5197 5420 -746 367 274 0 0 chrX_random 8217532 8217616 -1081390 - MIR SINE MIR -60 148 65 21 0 0 0 chrX_random 8217987 8218008 -1080998 + AT_rich Low_complexity Low_complexity 1 21 0 362 105 0 18 chrX_random 8218190 8218247 -1080759 - MADE1 DNA Mariner 0 80 25 1237 311 11 78 chrX_random 8218346 8218818 -1080188 + L1 LINE L1 2352 2791 -3355 800 176 136 5 chrX_random 8219268 8219489 -1079517 - L1MA8 LINE L1 -5 6286 6037 2275 85 3 0 chrX_random 8219531 8219824 -1079182 - AluY SINE Alu -17 294 1 366 335 25 5 chrX_random 8219853 8220053 -1078953 - L1M1 LINE L1 -2409 5156 4953 8968 58 1 1 chrX_random 8220178 8221305 -1077701 - L1P LINE L1 -4967 1179 53 22681 35 2 0 chrX_random 8221305 8224843 -1074163 + L1PA4 LINE L1 2612 6154 -1 402 306 98 33 chrX_random 8224885 8224934 -1074072 - L1M1 LINE L1 -2780 4785 4741 2240 112 0 3 chrX_random 8224934 8225239 -1073767 + AluSx SINE Alu 1 304 -8 402 306 98 33 chrX_random 8225239 8225434 -1073572 - L1M1 LINE L1 -2824 4741 4525 6202 153 11 15 chrX_random 8225441 8227159 -1071847 - L1MA2 LINE L1 0 6304 4590 842 269 41 47 chrX_random 8227366 8227972 -1071034 - L1M1 LINE L1 -4579 3167 2479 24 91 0 0 chrX_random 8228213 8228279 -1070727 + AT_rich Low_complexity Low_complexity 1 66 0 2389 87 0 3 chrX_random 8228443 8228752 -1070254 - AluSq SINE Alu -5 308 1 5165 189 26 13 chrX_random 8229976 8231040 -1067966 - Tigger6a DNA MER2_type -1 1082 5 451 163 0 0 chrX_random 8232130 8232210 -1066796 - MER116 DNA Mariner 0 80 1 487 304 31 16 chrX_random 8232409 8232603 -1066403 + MIR SINE MIR 66 262 0 5485 154 51 5 chrX_random 8233762 8235036 -1063970 + L1MA7 LINE L1 4952 6289 -2 1434 172 75 42 chrX_random 8235266 8235597 -1063409 - MER2 DNA MER2_type -2 342 1 272 195 78 52 chrX_random 8237255 8237332 -1061674 + MER91C DNA MER1_type 35 113 -27 283 288 51 74 chrX_random 8237477 8237907 -1061099 + L1M4 LINE L1 4413 4832 -1314 2721 268 78 41 chrX_random 8238397 8238512 -1060494 + L1M4 LINE L1 3645 3754 -2392 1458 182 64 72 chrX_random 8238512 8238903 -1060103 + MLT1B LTR MaLR 3 390 0 2721 268 78 41 chrX_random 8238903 8240314 -1058692 + L1M4 LINE L1 3754 5228 -918 1861 114 0 0 chrX_random 8240318 8240563 -1058443 + AluSx SINE Alu 1 245 -67 3477 141 19 37 chrX_random 8240565 8241354 -1057652 + L1MA4 LINE L1 5110 5889 -411 583 117 0 0 chrX_random 8241354 8241444 -1057562 + L1MA4 LINE L1 6199 6292 -8 2558 47 7 0 chrX_random 8242752 8243051 -1055955 + AluY SINE Alu 1 301 -10 211 162 0 59 chrX_random 8243449 8243517 -1055489 + CT-rich Low_complexity Low_complexity 1 64 0 230 140 0 20 chrX_random 8245047 8245097 -1053909 + (GGAA)n Simple_repeat Simple_repeat 2 50 0 25 31 0 0 chrX_random 8245166 8245198 -1053808 + AT_rich Low_complexity Low_complexity 1 32 0 279 281 60 48 chrX_random 8245250 8245469 -1053537 - HAL1b LINE L1 -106 2401 794 408 282 0 39 chrX_random 8245521 8245677 -1053329 - HAL1b LINE L1 -437 911 762 338 261 0 33 chrX_random 8245813 8245905 -1053101 - MLT1J2 LTR MaLR -298 152 64 1301 277 24 21 chrX_random 8245924 8246343 -1052663 - L1MC/D LINE L1 -2129 5679 5260 1765 138 41 80 chrX_random 8246695 8247012 -1051994 + THE1C LTR MaLR 1 302 -73 2222 109 3 0 chrX_random 8247012 8247314 -1051692 + AluSp SINE Alu 1 303 -10 1765 138 41 80 chrX_random 8247314 8247386 -1051620 + THE1C LTR MaLR 302 375 0 11278 166 74 37 chrX_random 8247758 8250656 -1048350 - L1MA3 LINE L1 0 7724 4629 1695 105 16 0 chrX_random 8250656 8250914 -1048092 - L1MA1 LINE L1 -8 6294 6033 11278 166 74 37 chrX_random 8250914 8251980 -1047026 - L1MA3 LINE L1 -3095 4629 3604 4465 69 5 5 chrX_random 8251983 8252575 -1046431 - L1PA7 LINE L1 0 6154 5563 2343 48 40 0 chrX_random 8252575 8252927 -1046079 + L1PA7 LINE L1 5199 5561 -593 * 4214 106 38 38 chrX_random 8252925 8253707 -1045299 - L1MA3 LINE L1 -3956 3609 2828 4805 79 50 131 chrX_random 8253707 8254606 -1044400 - LTR12 LTR ERV1 0 826 1 393 224 83 68 chrX_random 8254756 8255020 -1043986 - pTR5 LTR ERV1 -1428 1010 743 16024 153 46 12 chrX_random 8255020 8257744 -1041262 - L1M1 LINE L1 -4734 2831 15 2452 74 0 0 chrX_random 8258280 8258579 -1040427 - AluY SINE Alu -12 299 1 22 0 0 0 chrX_random 8459378 8459400 -839606 + GC_rich Low_complexity Low_complexity 1 22 0 306 0 0 0 chrX_random 8459547 8459581 -839425 + (T)n Simple_repeat Simple_repeat 1 34 0 293 281 21 0 chrX_random 8459603 8459699 -839307 + MIR SINE MIR 163 260 -2 2700 63 15 5 chrX_random 8460578 8460972 -838034 - L1M1 LINE L1 -642 5662 5265 1477 204 34 98 chrX_random 8461065 8461099 -837907 - MLT1C LTR MaLR 0 467 432 580 215 162 78 chrX_random 8461099 8461420 -837586 - MER7A DNA MER2_type 0 346 1 1477 204 34 98 chrX_random 8461420 8461884 -837122 - MLT1C LTR MaLR -35 432 1 295 333 0 24 chrX_random 8461884 8462007 -836999 + MER94 DNA DNA 5 124 -10 619 240 128 0 chrX_random 8462113 8462292 -836714 - MER58A DNA MER1_type -13 211 10 246 98 73 0 chrX_random 8462453 8462535 -836471 + (TA)n Simple_repeat Simple_repeat 1 88 0 2097 118 3 7 chrX_random 8462538 8462827 -836179 - AluSx SINE Alu -24 288 1 201 246 18 18 chrX_random 8462951 8463008 -835998 + L2 LINE L2 3255 3311 -2 247 193 57 80 chrX_random 8463172 8463260 -835746 - MIR SINE MIR -70 192 107 2098 98 7 30 chrX_random 8463606 8463911 -835095 + AluSg SINE Alu 1 298 -12 204 359 19 0 chrX_random 8464347 8464400 -834606 - L2 LINE L2 -90 3182 3129 508 305 17 22 chrX_random 8464401 8464702 -834304 - LTR16A LTR ERVL -9 441 90 2155 92 0 33 chrX_random 8465780 8466104 -832902 + AluSc SINE Alu 1 309 0 22 0 0 0 chrX_random 8466439 8466461 -832545 + AT_rich Low_complexity Low_complexity 1 22 0 2472 95 0 0 chrX_random 8466464 8466768 -832238 + AluSx SINE Alu 1 304 -8 24 0 0 0 chrX_random 8467457 8467481 -831525 + AT_rich Low_complexity Low_complexity 1 24 0 294 339 39 15 chrX_random 8468180 8468310 -830696 + L2 LINE L2 3139 3271 -1 208 75 25 25 chrX_random 8468310 8468350 -830656 + (GAAA)n Simple_repeat Simple_repeat 4 43 0 580 306 35 39 chrX_random 8468925 8469088 -829918 + MIR SINE MIR 32 195 -67 2390 71 20 0 chrX_random 8469088 8469382 -829624 + AluSc SINE Alu 1 300 -9 580 306 35 39 chrX_random 8469382 8469450 -829556 + MIR SINE MIR 195 262 0 2287 95 7 0 chrX_random 8470006 8470310 -828696 - AluSq SINE Alu -7 306 1 328 201 22 129 chrX_random 8471027 8471166 -827840 + MIR SINE MIR 127 250 -12 26 0 0 0 chrX_random 8472263 8472289 -826717 + AT_rich Low_complexity Low_complexity 1 26 0 1956 146 33 0 chrX_random 8472891 8473012 -825994 + AluJb SINE Alu 1 117 -195 207 0 0 0 chrX_random 8473012 8473035 -825971 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 1956 146 33 0 chrX_random 8473035 8473215 -825791 + AluJb SINE Alu 117 312 0 384 201 69 57 chrX_random 8473554 8473713 -825293 - MER103 DNA DNA -1 165 5 829 309 122 9 chrX_random 8474429 8474879 -824127 + L2 LINE L2 2811 3311 -2 21 0 0 0 chrX_random 8475351 8475372 -823634 + AT_rich Low_complexity Low_complexity 1 21 0 238 264 0 0 chrX_random 8478938 8478991 -820015 + L2 LINE L2 1919 1971 -1343 2653 290 85 25 chrX_random 8478993 8480299 -818707 + L2 LINE L2 1922 3308 -5 327 294 32 16 chrX_random 8480288 8480414 -818592 + MIR SINE MIR 134 261 -1 * 315 0 0 0 chrX_random 8483698 8483733 -815273 + (CA)n Simple_repeat Simple_repeat 2 36 0 231 296 61 45 chrX_random 8483957 8484089 -814917 + L2 LINE L2 3179 3312 -1 446 226 9 70 chrX_random 8484843 8484958 -814048 - MER5A DNA MER1_type -78 111 4 332 255 61 31 chrX_random 8485387 8485485 -813521 - L2 LINE L2 -18 3254 3154 998 188 0 11 chrX_random 8485966 8486147 -812859 + MER58A DNA MER1_type 2 180 -44 825 314 68 52 chrX_random 8486225 8486664 -812342 - MER115 DNA AcHobo -247 446 1 187 330 126 0 chrX_random 8486964 8487067 -811939 + MIR SINE MIR 11 126 -136 305 320 24 9 chrX_random 8487439 8487625 -811381 - MER5B DNA MER1_type 0 178 1 2243 99 0 0 chrX_random 8488954 8489257 -809749 - AluY SINE Alu -8 303 1 306 0 0 0 chrX_random 8489269 8489303 -809703 + (T)n Simple_repeat Simple_repeat 1 34 0 22 0 0 0 chrX_random 8489926 8489948 -809058 + GC_rich Low_complexity Low_complexity 1 22 0 3332 82 34 23 chrX_random 8490058 8490581 -808425 + L1MA2 LINE L1 5776 6304 0 1801 196 40 65 chrX_random 8490958 8491514 -807492 + MER34 LTR ERV1 1 542 0 2314 108 0 0 chrX_random 8491514 8491820 -807186 - AluSx SINE Alu -6 306 1 203 267 122 0 chrX_random 8492442 8492532 -806474 + L3b LINE CR1 1289 1389 -194 350 267 25 25 chrX_random 8493469 8493589 -805417 + MIR SINE MIR 86 205 -57 384 22 0 0 chrX_random 8493694 8493739 -805267 + (CA)n Simple_repeat Simple_repeat 2 46 0 65 43 0 0 chrX_random 8493966 8494059 -804947 + AT_rich Low_complexity Low_complexity 1 93 0 935 250 14 0 chrX_random 8494118 8494338 -804668 - MER58A DNA MER1_type 0 224 2 1864 120 0 28 chrX_random 8495258 8495541 -803465 - AluJb SINE Alu -31 281 7 2370 127 57 55 chrX_random 8495800 8495963 -803043 - L1MB4 LINE L1 -5 6175 6014 1958 123 3 3 chrX_random 8495963 8496247 -802759 + AluSq SINE Alu 1 284 -29 2370 127 57 55 chrX_random 8496247 8496438 -802568 - L1MB4 LINE L1 -166 6014 5817 1397 206 40 30 chrX_random 8496438 8496734 -802272 - AluJo SINE Alu -13 299 1 2370 127 57 55 chrX_random 8496734 8496873 -802133 - L1MB4 LINE L1 -363 5817 5680 700 125 7 83 chrX_random 8497017 8497123 -801883 + MIR SINE MIR 119 213 -49 548 225 47 31 chrX_random 8497123 8497252 -801754 + FLAM_A SINE Alu 1 131 -2 700 125 7 83 chrX_random 8497252 8497289 -801717 + MIR SINE MIR 213 251 -11 2177 125 0 0 chrX_random 8498015 8498319 -800687 + AluSx SINE Alu 1 304 -8 31 26 0 0 chrX_random 8498347 8498385 -800621 + AT_rich Low_complexity Low_complexity 1 38 0 245 297 186 21 chrX_random 8498713 8498858 -800148 + MIR3 SINE MIR 9 177 -31 655 310 86 12 chrX_random 8498979 8499224 -799782 + LTR16C LTR ERVL 1 263 -228 1163 93 0 0 chrX_random 8499251 8499401 -799605 - AluSq SINE Alu -159 154 5 707 256 50 5 chrX_random 8499513 8499712 -799294 + LTR16C LTR ERVL 280 487 -4 189 298 193 35 chrX_random 8500213 8500327 -798679 + L2 LINE L2 3137 3268 -4 457 207 36 45 chrX_random 8501939 8502050 -796956 - MIR SINE MIR -67 195 86 435 277 4 94 chrX_random 8502047 8502282 -796724 - L2 LINE L2 -21 3292 3079 * 207 191 24 0 chrX_random 8502559 8502601 -796405 + (ATG)n Simple_repeat Simple_repeat 3 45 0 1565 210 36 31 chrX_random 8502733 8503209 -795797 - MER113 DNA MER1_type? -33 488 11 990 186 117 23 chrX_random 8503484 8503926 -795080 - MLT1E2 LTR MaLR 0 626 56 242 259 0 17 chrX_random 8504024 8504082 -794924 - L2 LINE L2 0 3272 3216 1916 138 3 24 chrX_random 8505122 8505413 -793593 + AluJo SINE Alu 1 285 -27 1069 211 13 22 chrX_random 8505798 8506067 -792939 + MLT1D LTR MaLR 200 502 -3 1955 154 59 6 chrX_random 8506132 8506488 -792518 - THE1C LTR MaLR 0 375 1 6591 112 47 25 chrX_random 8506488 8507180 -791826 - THE1C-int LTR MaLR 0 1580 904 2085 121 24 3 chrX_random 8507180 8507470 -791536 - AluSx SINE Alu -16 296 1 6591 112 47 25 chrX_random 8507470 8507847 -791159 - THE1C-int LTR MaLR -676 904 537 2334 107 3 3 chrX_random 8507847 8508156 -790850 - AluSx SINE Alu 0 312 4 6591 112 47 25 chrX_random 8508156 8508608 -790398 - THE1C-int LTR MaLR -1043 537 1 1822 159 55 27 chrX_random 8508608 8508973 -790033 - THE1C LTR MaLR 0 375 1 1103 335 37 30 chrX_random 8508974 8509737 -789269 - HERV16 LTR ERVL -1391 4263 3496 315 354 28 28 chrX_random 8510519 8510700 -788306 - HERV16 LTR ERVL -4815 181 1 729 301 45 3 chrX_random 8510700 8510986 -788020 - LTR16C LTR ERVL 0 491 194 2288 100 0 0 chrX_random 8512416 8512706 -786300 + AluSx SINE Alu 1 290 -22 465 236 99 16 chrX_random 8513038 8513220 -785786 - MIR SINE MIR 0 262 66 331 274 88 101 chrX_random 8513538 8514005 -785001 + L1ME4a LINE L1 5582 6042 -79 807 147 40 11 chrX_random 8514292 8514469 -784537 + MER53 DNA DNA 5 186 -3 2119 120 3 0 chrX_random 8514495 8514804 -784202 + AluSg SINE Alu 1 310 0 21 0 0 0 chrX_random 8515181 8515202 -783804 + AT_rich Low_complexity Low_complexity 1 21 0 3956 149 31 22 chrX_random 8515310 8515816 -783190 + L1MA4 LINE L1 5520 6037 -263 2365 64 6 22 chrX_random 8515816 8516129 -782877 + AluY SINE Alu 1 308 -3 3956 149 31 22 chrX_random 8516129 8516392 -782614 + L1MA4 LINE L1 6037 6296 -4 722 237 156 9 chrX_random 8517033 8517257 -781749 - MIR SINE MIR -3 259 3 2109 124 0 0 chrX_random 8517801 8518115 -780891 + AluSq SINE Alu 1 314 0 4255 132 30 9 chrX_random 8518206 8518898 -780108 - MER39 LTR ERV1 0 707 1 348 299 24 8 chrX_random 8519302 8519429 -779577 - MER5A DNA MER1_type -60 129 1 718 192 33 67 chrX_random 8520405 8520645 -778361 - MER67B LTR ERV1 -2 659 428 1645 189 68 43 chrX_random 8520746 8521190 -777816 - MER67B LTR ERV1 -206 455 1 1958 109 10 10 chrX_random 8521742 8522053 -776953 + AluY SINE Alu 1 311 0 29 84 0 0 chrX_random 8522184 8522255 -776751 + AT_rich Low_complexity Low_complexity 1 71 0 187 93 47 0 chrX_random 8522267 8522310 -776696 + (TTATA)n Simple_repeat Simple_repeat 5 49 0 360 268 91 39 chrX_random 8522338 8522474 -776532 + HAL1 LINE L1 1395 1523 -984 2544 64 0 3 chrX_random 8522474 8522786 -776220 - AluY SINE Alu 0 311 1 360 268 91 39 chrX_random 8522786 8522903 -776103 + HAL1 LINE L1 1523 1661 -846 635 198 148 25 chrX_random 8523113 8523275 -775731 - MER5A DNA MER1_type -1 188 7 1322 292 69 59 chrX_random 8523372 8523611 -775395 + L1MDa LINE L1 2427 2662 -3878 2201 116 3 0 chrX_random 8523611 8523912 -775094 + AluSx SINE Alu 1 302 -10 1322 292 69 59 chrX_random 8523912 8524250 -774756 + L1MDa LINE L1 2662 2995 -3545 1987 132 50 0 chrX_random 8524250 8524531 -774475 + AluSg SINE Alu 1 295 -15 1322 292 69 59 chrX_random 8524531 8524780 -774226 + L1MDa LINE L1 2995 3240 -3300 201 74 0 0 chrX_random 8524780 8524807 -774199 + (CA)n Simple_repeat Simple_repeat 2 28 0 1322 292 69 59 chrX_random 8524807 8525116 -773890 + L1MDa LINE L1 3240 3587 -2953 362 348 19 48 chrX_random 8525648 8525964 -773042 - L1MDa LINE L1 -6212 328 22 331 308 105 61 chrX_random 8526404 8526791 -772215 - MLT1J2 LTR MaLR -2 448 39 2396 79 3 0 chrX_random 8526791 8527095 -771911 + AluSc SINE Alu 4 308 -1 331 308 105 61 chrX_random 8527095 8527136 -771870 - MLT1J2 LTR MaLR -411 39 1 576 267 175 0 chrX_random 8527781 8527972 -771034 + MIR SINE MIR 34 261 -1 24 32 0 0 chrX_random 8528228 8528259 -770747 + AT_rich Low_complexity Low_complexity 1 31 0 2300 93 3 0 chrX_random 8528303 8528593 -770413 - AluSg SINE Alu -19 291 1 2504 276 15 7 chrX_random 8528616 8529428 -769578 - L1ME3A LINE L1 -5 6165 5348 202 54 27 27 chrX_random 8529699 8529736 -769270 + (CAAAAA)n Simple_repeat Simple_repeat 5 41 0 320 264 171 21 chrX_random 8529838 8529978 -769028 - MIR SINE MIR -21 241 81 355 278 32 40 chrX_random 8530103 8530229 -768777 + MIR3 SINE MIR 78 202 -6 468 333 117 17 chrX_random 8530360 8530600 -768406 + L2 LINE L2 3005 3268 -4 353 234 62 55 chrX_random 8530703 8530848 -768158 - LTR16A1 LTR ERVL -124 333 188 341 361 0 8 chrX_random 8531558 8531677 -767329 + L2 LINE L2 3192 3309 -4 22 0 0 0 chrX_random 8532012 8532034 -766972 + AT_rich Low_complexity Low_complexity 1 22 0 408 341 7 14 chrX_random 8534261 8534399 -764607 - MIR3 SINE MIR -24 184 48 557 239 151 25 chrX_random 8535210 8535369 -763637 + MER5A DNA MER1_type 9 187 -2 221 176 0 39 chrX_random 8535562 8535613 -763393 + C-rich Low_complexity Low_complexity 1 49 0 210 296 0 68 chrX_random 8536794 8536926 -762080 + T-rich Low_complexity Low_complexity 5 127 0 579 66 0 0 chrX_random 8537354 8537430 -761576 + (TG)n Simple_repeat Simple_repeat 1 76 0 259 242 95 74 chrX_random 8540888 8540983 -758023 + MIR SINE MIR 27 123 -139 195 343 30 0 chrX_random 8543669 8543736 -755270 - MIR SINE MIR -66 142 74 239 281 146 0 chrX_random 8545190 8545272 -753734 + L2 LINE L2 3160 3253 -19 256 172 16 16 chrX_random 8545486 8545550 -753456 + CT-rich Low_complexity Low_complexity 2 65 0 1187 128 46 0 chrX_random 8545705 8545901 -753105 + MER2 DNA MER2_type 5 209 -136 24 77 0 0 chrX_random 8545906 8545958 -753048 + AT_rich Low_complexity Low_complexity 1 52 0 294 29 0 0 chrX_random 8546676 8546711 -752295 + (TG)n Simple_repeat Simple_repeat 2 36 0 277 243 117 19 chrX_random 8548877 8548980 -750026 - MLT1H LTR MaLR -7 542 430 1147 241 68 12 chrX_random 8549022 8549345 -749661 - MLT1H LTR MaLR -197 352 12 195 281 53 0 chrX_random 8550269 8550326 -748680 - L3 LINE CR1 -114 1463 1404 219 214 0 129 chrX_random 8551817 8551887 -747119 - L2 LINE L2 -74 3198 3138 370 284 39 24 chrX_random 8552866 8552993 -746013 + MIR SINE MIR 107 235 -27 1654 199 36 31 chrX_random 8553013 8553401 -745605 - MLT1B LTR MaLR 0 390 1 2043 181 29 52 chrX_random 8553455 8553828 -745178 - Charlie1b DNA MER1_type -2249 512 153 2066 132 7 0 chrX_random 8553828 8554124 -744882 - AluSx SINE Alu -8 304 7 2043 181 29 52 chrX_random 8554124 8554274 -744732 - Charlie1b DNA MER1_type -2608 153 1 226 121 86 0 chrX_random 8554790 8554848 -744158 - L1MA7 LINE L1 0 6291 6229 1692 147 34 31 chrX_random 8554950 8555243 -743763 - AluSx SINE Alu -18 294 1 278 197 28 0 chrX_random 8555253 8555324 -743682 + (TATATG)n Simple_repeat Simple_repeat 4 76 0 328 310 0 0 chrX_random 8555331 8555418 -743588 - L1MC4 LINE L1 -1342 6700 6614 * 350 261 0 22 chrX_random 8555360 8555452 -743554 + L1MC4 LINE L1 6614 6703 -1339 216 97 0 0 chrX_random 8555423 8555454 -743552 + (TA)n Simple_repeat Simple_repeat 2 32 0 * 1708 217 73 28 chrX_random 8555842 8556266 -742740 + LTR40b LTR ERVL 1 443 -19 2255 117 14 31 chrX_random 8556300 8556658 -742348 + MER47A DNA MER2_type 6 357 -9 372 295 44 96 chrX_random 8557523 8557909 -741097 - MLT1J LTR MaLR -142 369 4 186 311 115 68 chrX_random 8558088 8558323 -740683 + L2 LINE L2 2837 3082 -231 25 31 0 0 chrX_random 8559612 8559644 -739362 + AT_rich Low_complexity Low_complexity 1 32 0 333 332 118 11 chrX_random 8559916 8560103 -738903 + MIR SINE MIR 49 255 -7 1044 274 26 13 chrX_random 8560508 8560815 -738191 - LTR16A1 LTR ERVL 0 457 147 264 347 67 6 chrX_random 8561196 8561275 -737731 - MIR SINE MIR -1 261 188 2123 129 0 16 chrX_random 8561275 8561592 -737414 - AluSx SINE Alu 0 312 1 264 347 67 6 chrX_random 8561592 8561719 -737287 - MIR SINE MIR -74 188 47 962 187 50 10 chrX_random 8561807 8562005 -737001 - MLT1F LTR MaLR -1 566 361 6475 60 0 7 chrX_random 8562006 8562835 -736171 - L1PA7 LINE L1 0 6154 5332 * 6947 96 4 7 chrX_random 8562832 8563836 -735170 + L1P LINE L1 2217 3217 -2929 2274 109 0 0 chrX_random 8563836 8564129 -734877 - AluSx SINE Alu -18 294 2 1576 229 17 32 chrX_random 8564141 8564486 -734520 - MLT1F LTR MaLR -202 340 1 2444 88 3 0 chrX_random 8566007 8566315 -732691 + AluSp SINE Alu 1 309 -4 1697 134 57 51 chrX_random 8567008 8567343 -731663 - MER1B DNA MER1_type 0 337 1 436 299 45 106 chrX_random 8567925 8568369 -730637 + L2 LINE L2 2269 2685 -629 1526 209 79 64 chrX_random 8568369 8568837 -730169 - MER110 LTR ERV1 0 491 17 594 257 201 12 chrX_random 8568868 8569237 -729769 + L2 LINE L2 2722 3159 -154 * 599 339 0 0 chrX_random 8569229 8569421 -729585 + MIR SINE MIR 20 211 -51 933 228 55 58 chrX_random 8569461 8569772 -729234 - MER110A LTR ERV1 -28 440 131 308 130 0 0 chrX_random 8569902 8569948 -729058 + MIR SINE MIR 199 244 -18 338 221 0 52 chrX_random 8570009 8570086 -728920 + L2 LINE L2 3241 3313 0 427 373 0 0 chrX_random 8570086 8570244 -728762 + L2 LINE L2 3156 3313 0 476 205 106 7 chrX_random 8570367 8570518 -728488 + MER103 DNA DNA 1 166 0 2305 99 54 20 chrX_random 8571168 8571520 -727486 - THE1B LTR MaLR 0 364 1 1340 219 9 44 chrX_random 8571761 8571846 -727160 + MER58B DNA MER1_type 38 124 -2296 1965 170 11 6 chrX_random 8571846 8572204 -726802 + MER46B DNA MER2_type 1 235 -1 1340 219 9 44 chrX_random 8572204 8572433 -726573 + MER58B DNA MER1_type 124 341 0 290 371 41 24 chrX_random 8572770 8572940 -726066 - L3b LINE CR1 0 1583 1411 2314 92 0 0 chrX_random 8574134 8574427 -724579 + AluSx SINE Alu 1 293 -19 295 274 24 24 chrX_random 8575197 8575321 -723685 - MIR SINE MIR 0 262 139 301 326 116 14 chrX_random 8575626 8575773 -723233 - MIR SINE MIR -10 252 91 558 126 11 11 chrX_random 8576301 8576396 -722610 - L1PA15 LINE L1 0 6165 6071 303 378 57 69 chrX_random 8577402 8577686 -721320 + L2 LINE L2 2853 3132 -140 2560 46 0 3 chrX_random 8577686 8577988 -721018 + AluY SINE Alu 1 301 -10 303 378 57 69 chrX_random 8577988 8578124 -720882 + L2 LINE L2 3132 3268 -4 311 296 25 0 chrX_random 8579031 8579112 -719894 + L2 LINE L2 3227 3309 -4 2183 116 3 0 chrX_random 8579164 8579458 -719548 - AluSx SINE Alu -17 295 1 21 0 0 0 chrX_random 8579716 8579737 -719269 + AT_rich Low_complexity Low_complexity 1 21 0 338 294 24 0 chrX_random 8580761 8580846 -718160 + MER5A DNA MER1_type 61 147 -42 486 0 0 0 chrX_random 8581028 8581082 -717924 + (TG)n Simple_repeat Simple_repeat 2 55 0 24 0 0 0 chrX_random 8582437 8582461 -716545 + AT_rich Low_complexity Low_complexity 1 24 0 243 289 167 44 chrX_random 8583220 8583538 -715468 - L2 LINE L2 -569 2745 2389 282 358 22 15 chrX_random 8583797 8583934 -715072 - MIR SINE MIR -108 154 17 195 204 0 0 chrX_random 8583977 8584021 -714985 + A-rich Low_complexity Low_complexity 3 46 0 807 195 130 5 chrX_random 8584328 8584543 -714463 + MER5C DNA MER1_type 80 321 -3 590 135 135 47 chrX_random 8586237 8586407 -712599 - MER53 DNA DNA 0 189 5 2257 118 0 0 chrX_random 8586427 8586732 -712274 - AluSx SINE Alu -7 305 1 1744 169 42 17 chrX_random 8588583 8588939 -710067 - MLT1A1 LTR MaLR 0 365 1 2116 101 3 7 chrX_random 8589201 8589499 -709507 - AluSg SINE Alu -13 297 1 254 193 57 80 chrX_random 8589845 8589933 -709073 + MIR SINE MIR 107 192 -70 201 246 18 18 chrX_random 8590097 8590154 -708852 - L2 LINE L2 -2 3311 3255 2054 121 3 7 chrX_random 8590278 8590567 -708439 + AluSx SINE Alu 1 288 -24 326 123 59 18 chrX_random 8590570 8590740 -708266 + (TA)n Simple_repeat Simple_repeat 2 178 0 561 234 9 0 chrX_random 8591001 8591112 -707894 + MER81 DNA DNA 1 112 -2 212 349 37 21 chrX_random 8591490 8591636 -707370 + MIR SINE MIR 23 170 -85 2408 73 21 0 chrX_random 8593742 8594069 -704937 - L1PA13 LINE L1 -1 6162 5829 2404 142 0 0 chrX_random 8594069 8594457 -704549 + L1P LINE L1 4773 5160 -986 219 348 107 0 chrX_random 8594624 8594736 -704270 + L2 LINE L2 3149 3272 0 2211 117 0 0 chrX_random 8597392 8597701 -701305 + AluSx SINE Alu 1 309 -3 343 305 35 82 chrX_random 8598205 8598461 -700545 - L1MC4a LINE L1 -1856 5952 5709 2062 146 0 0 chrX_random 8598535 8598829 -700177 - AluSx SINE Alu -18 294 1 3430 135 20 7 chrX_random 8598933 8599481 -699525 - LTR38 LTR ERV1 0 556 2 325 172 0 0 chrX_random 8599728 8599792 -699214 - L1MB5 LINE L1 -1 6173 6110 9079 164 34 31 chrX_random 8599794 8602220 -696786 - L1MA9 LINE L1 -574 5738 3288 2496 164 42 29 chrX_random 8602220 8602768 -696238 + L1MA9 LINE L1 5757 6312 0 2076 208 49 0 chrX_random 8602777 8603224 -695782 - L1MB5 LINE L1 -54 6120 5652 1622 121 0 9 chrX_random 8603238 8603470 -695536 - AluSg/x SINE Alu 0 310 81 321 111 0 0 chrX_random 8603470 8603515 -695491 - Alu SINE Alu -257 45 1 304 137 20 0 chrX_random 8603515 8603566 -695440 - L1MB5 LINE L1 -505 5669 5618 247 329 0 13 chrX_random 8604367 8604446 -694560 - MIR3 SINE MIR -9 199 122 2426 173 54 16 chrX_random 8604521 8605006 -694000 - MLT1D LTR MaLR -2 503 1 24 0 0 0 chrX_random 8605792 8605816 -693190 + AT_rich Low_complexity Low_complexity 1 24 0 533 182 68 68 chrX_random 8606506 8606682 -692324 + MER104 DNA MER2_type 5 180 0 23 0 0 0 chrX_random 8607667 8607690 -691316 + AT_rich Low_complexity Low_complexity 1 23 0 2588 52 0 0 chrX_random 8608442 8608751 -690255 + AluY SINE Alu 1 309 -2 2270 105 0 7 chrX_random 8608767 8609072 -689934 + AluSx SINE Alu 7 309 -3 1724 148 6 64 chrX_random 8609140 8609451 -689555 - AluJb SINE Alu -19 293 1 21 36 0 0 chrX_random 8609931 8609959 -689047 + AT_rich Low_complexity Low_complexity 1 28 0 2614 82 30 8 chrX_random 8610120 8610487 -688519 + THE1C LTR MaLR 1 375 0 27 49 0 0 chrX_random 8610506 8610547 -688459 + AT_rich Low_complexity Low_complexity 1 41 0 407 338 26 7 chrX_random 8610738 8610889 -688117 - MLT1I LTR MaLR -150 259 106 849 245 90 30 chrX_random 8610912 8611379 -687627 + LTR33A LTR ERVL 1 521 -2 356 247 0 0 chrX_random 8611389 8611462 -687544 - MLT1I LTR MaLR -332 77 5 487 301 76 93 chrX_random 8611464 8612587 -686419 + L2 LINE L2 2211 3313 0 228 238 0 0 chrX_random 8612602 8612665 -686341 + CT-rich Low_complexity Low_complexity 3 65 0 2249 124 11 101 chrX_random 8612785 8613260 -685746 - MSTB1 LTR MaLR 0 432 1 361 297 125 35 chrX_random 8613294 8613526 -685480 + MIR SINE MIR 7 259 -3 470 208 0 0 chrX_random 8613824 8613930 -685076 - L1MA7 LINE L1 -6 6285 6180 299 328 224 10 chrX_random 8616149 8616350 -682656 - MIR SINE MIR -14 248 5 387 271 42 51 chrX_random 8616615 8616733 -682273 - L2 LINE L2 0 3313 3197 1350 146 41 4 chrX_random 8617349 8617616 -681390 + L1MA4 LINE L1 6016 6292 -8 22 56 0 0 chrX_random 8617644 8617680 -681326 + AT_rich Low_complexity Low_complexity 1 36 0 325 309 70 23 chrX_random 8617729 8617985 -681021 - L1ME LINE L1 -306 5815 5548 408 331 11 28 chrX_random 8618032 8618213 -680793 - L1ME LINE L1 -734 5432 5255 23 68 0 0 chrX_random 8618398 8618442 -680564 + AT_rich Low_complexity Low_complexity 1 44 0 182 288 61 15 chrX_random 8618650 8618716 -680290 - L2 LINE L2 0 3272 3204 260 285 81 57 chrX_random 8618822 8618945 -680061 + MIR3 SINE MIR 65 190 -18 664 259 103 5 chrX_random 8621300 8621476 -677530 - MIR SINE MIR -48 214 18 5273 52 0 1 chrX_random 8621476 8622128 -676878 - L1PA8 LINE L1 0 6172 5522 522 264 55 22 chrX_random 8624109 8624291 -674715 + MIR SINE MIR 72 259 -3 243 189 0 19 chrX_random 8624292 8624345 -674661 + (ATG)n Simple_repeat Simple_repeat 2 53 0 420 82 0 0 chrX_random 8625355 8625416 -673590 + (CA)n Simple_repeat Simple_repeat 2 62 0 605 339 138 27 chrX_random 8625424 8625738 -673268 - L2 LINE L2 -37 3276 2998 324 0 0 0 chrX_random 8625738 8625774 -673232 + (CA)n Simple_repeat Simple_repeat 1 36 0 605 339 138 27 chrX_random 8625774 8626152 -672854 - L2 LINE L2 -315 2998 2500 210 330 113 28 chrX_random 8626495 8626601 -672405 - L2 LINE L2 -37 3235 3121 567 223 25 11 chrX_random 8626863 8627027 -671979 - L1ME LINE L1 -474 5647 5481 1933 130 43 7 chrX_random 8627028 8627329 -671677 + MER7A DNA MER2_type 1 310 -36 2283 110 7 3 chrX_random 8627345 8627655 -671351 - AluSx SINE Alu -1 311 1 214 257 238 0 chrX_random 8627891 8627996 -671010 - L2 LINE L2 0 3272 3143 970 306 11 11 chrX_random 8628094 8628359 -670647 + LTR16C LTR ERVL 79 343 -148 3230 142 143 13 chrX_random 8629291 8629962 -669044 + L1MA4A LINE L1 5521 6278 -25 607 265 35 55 chrX_random 8630211 8630411 -668595 - MIR SINE MIR -42 220 25 288 373 16 0 chrX_random 8630712 8630838 -668168 + L1MC/D LINE L1 5537 5664 -2144 868 248 92 89 chrX_random 8631041 8631549 -667457 - L2 LINE L2 0 3313 2804 1345 186 46 0 chrX_random 8631552 8631866 -667140 - MER33 DNA MER1_type -1 323 1 2268 249 54 42 chrX_random 8631870 8632553 -666453 - L2 LINE L2 -515 2799 2109 207 96 58 0 chrX_random 8632672 8632724 -666282 + (TA)n Simple_repeat Simple_repeat 2 56 0 536 293 20 80 chrX_random 8632809 8633208 -665798 + L1MCb LINE L1 2 376 -5669 319 138 0 17 chrX_random 8633256 8633314 -665692 - L1MDa LINE L1 -4625 1915 1859 333 238 36 12 chrX_random 8633330 8633414 -665592 + MLT1I LTR MaLR 259 344 -65 2360 71 0 10 chrX_random 8634001 8634297 -664709 - AluY SINE Alu -18 293 1 210 37 0 0 chrX_random 8635364 8635391 -663615 + (GGAA)n Simple_repeat Simple_repeat 1 27 0 7847 145 150 3 chrX_random 8635856 8637348 -661658 + L1PA13 LINE L1 2506 4216 -1930 6272 85 18 1 chrX_random 8637351 8638607 -660399 + L1PA13 LINE L1 4874 6163 0 351 244 13 0 chrX_random 8639069 8639147 -659859 - L2 LINE L2 -1 3312 3234 300 302 99 45 chrX_random 8640082 8640304 -658702 + MIR SINE MIR 29 262 0 27580 42 4 0 chrX_random 8641543 8645724 -653282 - L1PA5 LINE L1 -1 6153 1956 2358 89 3 0 chrX_random 8645887 8646191 -652815 - AluY SINE Alu -6 305 1 329 255 95 41 chrX_random 8646394 8646534 -652472 - MER21B LTR ERV1 -359 572 326 180 227 120 67 chrX_random 8647135 8647210 -651796 + MIR3 SINE MIR 115 193 -15 191 185 74 19 chrX_random 8647401 8647455 -651551 - L2 LINE L2 -1 3271 3215 686 306 40 16 chrX_random 8647554 8647806 -651200 - MIR SINE MIR -1 261 4 6368 37 10 0 chrX_random 8647994 8648737 -650269 - L1P LINE L1 -1512 4634 3881 2473 21 0 3 chrX_random 8648737 8649042 -649964 + L1PA2 LINE L1 5862 6155 0 6368 37 10 0 chrX_random 8649042 8649084 -649922 - L1P LINE L1 -2265 3881 3841 1905 77 4 0 chrX_random 8650657 8650892 -648114 + AluY SINE Alu 1 236 -75 26 30 0 0 chrX_random 8650999 8651032 -647974 + AT_rich Low_complexity Low_complexity 1 33 0 2057 83 4 0 chrX_random 8653558 8653812 -645194 + AluSc SINE Alu 28 282 -27 22 0 0 0 chrX_random 8653812 8653834 -645172 + AT_rich Low_complexity Low_complexity 1 22 0 603 278 62 17 chrX_random 8653848 8654024 -644982 + MIR SINE MIR 2 185 -77 214 304 14 0 chrX_random 8654027 8654096 -644910 + (TA)n Simple_repeat Simple_repeat 1 70 0 3322 290 73 23 chrX_random 8654263 8655771 -643235 + L2 LINE L2 1732 3313 0 22 0 0 0 chrX_random 8656385 8656407 -642599 + AT_rich Low_complexity Low_complexity 1 22 0 1632 179 27 7 chrX_random 8656439 8656736 -642270 + AluJo SINE Alu 3 305 -7 2171 95 7 7 chrX_random 8657093 8657388 -641618 + AluSg SINE Alu 1 295 -15 387 41 0 0 chrX_random 8657984 8658033 -640973 + (TTTTC)n Simple_repeat Simple_repeat 2 50 0 2063 132 0 3 chrX_random 8658035 8658499 -640507 - AluSx SINE Alu 0 463 1 359 327 46 7 chrX_random 8658750 8658903 -640103 - L2 LINE L2 -4 3309 3151 231 250 0 0 chrX_random 8658904 8658972 -640034 + GA-rich Low_complexity Low_complexity 3 70 0 948 293 143 11 chrX_random 8659240 8659674 -639332 - L2 LINE L2 -1 3312 2822 626 331 51 20 chrX_random 8659859 8660352 -638654 + L2 LINE L2 2661 3247 -66 666 275 64 14 chrX_random 8660355 8660573 -638433 - MIR SINE MIR 0 262 34 344 340 51 82 chrX_random 8660645 8660998 -638008 + L2 LINE L2 2928 3269 -3 4908 130 0 0 chrX_random 8661440 8662448 -636558 - L1PA15 LINE L1 0 6165 5190 208 280 13 67 chrX_random 8663297 8663372 -635634 - L2 LINE L2 -9 3263 3193 197 274 66 47 chrX_random 8663826 8663932 -635074 + MIR SINE MIR 100 207 -55 393 133 48 24 chrX_random 8664690 8664773 -634233 - L1MA9 LINE L1 -42 6270 6186 287 273 0 11 chrX_random 8664980 8665068 -633938 + CT-rich Low_complexity Low_complexity 2 88 0 439 339 156 0 chrX_random 8665250 8665436 -633570 - MIR SINE MIR -33 229 15 348 373 94 0 chrX_random 8665580 8665813 -633193 - L2 LINE L2 -48 3265 3011 768 339 33 20 chrX_random 8666285 8666680 -632326 - L2 LINE L2 -815 2499 2100 263 45 0 45 chrX_random 8666985 8667029 -631977 - L1PA5 LINE L1 0 6154 6113 * 1323 20 0 0 chrX_random 8667027 8667178 -631828 + L1PA6 LINE L1 5731 5881 -273 1995 125 0 17 chrX_random 8668295 8668591 -630415 + AluSx SINE Alu 1 291 -21 269 248 43 68 chrX_random 8668788 8668949 -630057 - L1MEd LINE L1 -4917 1202 1046 27 0 0 0 chrX_random 8669481 8669508 -629498 + AT_rich Low_complexity Low_complexity 1 27 0 5514 144 49 6 chrX_random 8669594 8670847 -628159 - L1MA6 LINE L1 -3 6297 4996 240 111 0 0 chrX_random 8670847 8670883 -628123 + (A)n Simple_repeat Simple_repeat 1 36 0 1988 118 7 0 chrX_random 8670899 8671170 -627836 - AluSx SINE Alu -17 295 23 214 273 0 18 chrX_random 8672585 8672640 -626366 + L2 LINE L2 3192 3245 -68 379 341 8 8 chrX_random 8672792 8672921 -626085 + MIR SINE MIR 4 132 -130 24 32 0 0 chrX_random 8673040 8673071 -625935 + AT_rich Low_complexity Low_complexity 1 31 0 265 288 0 25 chrX_random 8673257 8673337 -625669 - LTR33A LTR ERVL 0 523 446 929 237 14 14 chrX_random 8673967 8674186 -624820 + MER58A DNA MER1_type 5 223 -1 309 169 0 0 chrX_random 8674838 8674897 -624109 + GA-rich Low_complexity Low_complexity 2 60 0 2372 91 0 7 chrX_random 8675930 8676237 -622769 - AluSq SINE Alu -8 305 1 1008 224 0 0 chrX_random 8676283 8676475 -622531 - MER3 DNA MER1_type -11 198 7 560 222 123 18 chrX_random 8676737 8676908 -622098 - MER5A DNA MER1_type 0 189 1 378 300 108 0 chrX_random 8677866 8677996 -621010 + MIR SINE MIR 111 254 -8 381 235 87 66 chrX_random 8678503 8678686 -620320 + MER91B DNA MER1_type 1 187 -3 187 270 63 16 chrX_random 8679582 8679645 -619361 - L2 LINE L2 -1313 2001 1936 2232 101 0 3 chrX_random 8679896 8680192 -618814 + AluSq SINE Alu 1 295 -18 662 211 67 98 chrX_random 8680349 8680695 -618311 + L1MC5 LINE L1 6884 7218 -743 4585 149 30 4 chrX_random 8681609 8681747 -617259 + L1PA16 LINE L1 5357 5490 -676 2242 101 0 13 chrX_random 8681747 8682054 -616952 + AluSg SINE Alu 1 303 -7 4585 149 30 4 chrX_random 8682054 8682685 -616321 + L1PA16 LINE L1 5490 6146 -20 614 297 92 4 chrX_random 8682793 8683022 -615984 + MIR SINE MIR 13 261 -1 405 329 86 51 chrX_random 8683641 8683715 -615291 - MLT1K LTR MaLR 0 588 518 354 98 0 0 chrX_random 8683715 8683766 -615240 + (CA)n Simple_repeat Simple_repeat 2 52 0 261 0 0 0 chrX_random 8683765 8683794 -615212 + (GA)n Simple_repeat Simple_repeat 2 30 0 * 405 329 86 51 chrX_random 8683766 8684114 -614892 - MLT1K LTR MaLR -70 518 180 25 0 0 0 chrX_random 8685103 8685128 -613878 + AT_rich Low_complexity Low_complexity 1 25 0 854 93 0 0 chrX_random 8685362 8685470 -613536 + AluSq/x SINE Alu 1 108 -205 219 114 0 0 chrX_random 8685744 8685779 -613227 + (CA)n Simple_repeat Simple_repeat 2 36 0 3759 50 0 0 chrX_random 8685786 8686251 -612755 + L1PA5 LINE L1 5684 6148 -6 326 257 14 0 chrX_random 8686251 8686325 -612681 - MER58A DNA MER1_type -149 75 1 30 27 0 0 chrX_random 8686347 8686384 -612622 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chrX_random 8687318 8687339 -611667 + AT_rich Low_complexity Low_complexity 1 21 0 6293 81 8 1 chrX_random 8687339 8688213 -610793 - L1MA1 LINE L1 0 6302 5423 227 318 11 0 chrX_random 8688533 8688621 -610385 - L1MC4 LINE L1 -1350 6692 6604 279 133 0 0 chrX_random 8688657 8688702 -610304 + (TG)n Simple_repeat Simple_repeat 2 46 0 600 50 0 0 chrX_random 8689618 8689698 -609308 + (TC)n Simple_repeat Simple_repeat 2 81 0 249 209 0 33 chrX_random 8689702 8689793 -609213 + L1MC4 LINE L1 6614 6701 -1341 267 79 0 0 chrX_random 8690075 8690113 -608893 + (TG)n Simple_repeat Simple_repeat 1 38 0 317 259 26 24 chrX_random 8690271 8690393 -608613 - MLT1H LTR MaLR -375 174 61 303 342 90 32 chrX_random 8690808 8690963 -608043 - MIR3 SINE MIR -30 178 15 628 261 6 6 chrX_random 8691166 8691323 -607683 - MER69A DNA AcHobo -2 175 19 203 273 61 76 chrX_random 8691958 8692090 -606916 - MIR SINE MIR -96 166 37 1371 7 0 0 chrX_random 8692754 8692908 -606098 + AluYb8 SINE Alu 164 317 -1 1419 305 136 54 chrX_random 8693749 8694003 -605003 + L2 LINE L2 1025 1257 -2057 198 0 0 0 chrX_random 8694003 8694025 -604981 + (TC)n Simple_repeat Simple_repeat 1 22 0 1543 193 0 11 chrX_random 8694033 8694313 -604693 - AluJo SINE Alu -30 282 6 1419 305 136 54 chrX_random 8694313 8695183 -603823 + L2 LINE L2 1263 2251 -1063 1576 229 80 31 chrX_random 8695211 8695699 -603307 - MLT1F LTR MaLR 0 542 31 1150 333 99 25 chrX_random 8695713 8696095 -602911 + L2 LINE L2 2325 2677 -636 1649 220 53 16 chrX_random 8696095 8696545 -602461 - MLT1C LTR MaLR 0 467 1 1150 333 99 25 chrX_random 8696545 8697069 -601937 + L2 LINE L2 2677 3300 -13 516 163 231 38 chrX_random 8697626 8697786 -601220 + MIR SINE MIR 72 262 0 2184 210 72 4 chrX_random 8697925 8698396 -600610 - MLT1D LTR MaLR -2 503 1 885 199 32 16 chrX_random 8698700 8698886 -600120 + MER20 DNA MER1_type 31 219 0 217 200 0 20 chrX_random 8698927 8698977 -600029 + MER5A DNA MER1_type 4 52 -137