264 311 42 18 chr5 0 167 -203085365 + CT-rich Low_complexity Low_complexity 2 172 0 562 234 223 16 chr5 506 690 -203084842 - MER58A DNA MER1_type -2 222 1 26 30 0 0 chr5 1852 1885 -203083647 + AT_rich Low_complexity Low_complexity 1 33 0 556 233 58 28 chr5 2334 2574 -203082958 + L1M4 LINE L1 2958 3215 -2931 22 0 0 0 chr5 2720 2742 -203082790 + AT_rich Low_complexity Low_complexity 1 22 0 1602 163 12 4 chr5 2747 3004 -203082528 - AluJb SINE Alu -36 276 18 1506 120 48 0 chr5 3023 3273 -203082259 - AluSg SINE Alu -18 292 31 8725 48 1 7 chr5 3413 4507 -203081025 - L1P LINE L1 -1638 4508 3422 210 213 62 0 chr5 4793 4873 -203080659 + (TA)n Simple_repeat Simple_repeat 1 85 0 299 262 0 65 chr5 5141 5248 -203080284 + MIR SINE MIR 163 262 0 431 195 142 12 chr5 5420 5589 -203079943 - LTR54B LTR ERV1 0 498 308 646 189 49 0 chr5 5735 5857 -203079675 + MER41A LTR ERV1 426 553 -1 308 283 170 39 chr5 5859 6142 -203079390 + L2 LINE L2 2921 3240 -73 23 68 0 0 chr5 6955 6999 -203078533 + AT_rich Low_complexity Low_complexity 1 44 0 183 42 0 0 chr5 7669 7693 -203077839 + (T)n Simple_repeat Simple_repeat 1 24 0 2514 57 7 0 chr5 8144 8441 -203077091 + AluY SINE Alu 3 301 -10 1928 120 31 7 chr5 10114 10405 -203075127 + AluSx SINE Alu 1 298 -14 2364 91 0 7 chr5 10407 10704 -203074828 + AluSg SINE Alu 1 295 -15 2343 91 0 3 chr5 11588 11895 -203073637 - AluSx SINE Alu -6 306 1 1006 96 58 13 chr5 12189 12345 -203073187 - MER30 DNA MER1_type 0 230 68 1315 184 109 0 chr5 12734 13027 -203072505 + Charlie1 DNA MER1_type 2437 2761 0 435 193 167 0 chr5 13191 13305 -203072227 - L1MB5 LINE L1 -1 6173 6041 7263 110 11 17 chr5 13650 14859 -203070673 - L1P LINE L1 -3710 2436 1236 197 215 0 25 chr5 15218 15297 -203070235 + (CATA)n Simple_repeat Simple_repeat 4 80 0 338 0 0 23 chr5 15406 15449 -203070083 + (TTTC)n Simple_repeat Simple_repeat 3 44 0 2435 75 13 0 chr5 15452 15758 -203069774 - AluY SINE Alu -1 310 1 595 126 0 0 chr5 16189 16276 -203069256 + AluSg/x SINE Alu 198 284 -28 195 69 0 0 chr5 16276 16305 -203069227 + (TA)n Simple_repeat Simple_repeat 2 30 0 239 261 78 17 chr5 16338 16453 -203069079 - L1ME4a LINE L1 -49 6072 5951 2194 105 0 29 chr5 16473 16786 -203068746 - AluSx SINE Alu -8 304 1 1576 74 35 30 chr5 16829 17007 -203068525 + L1MA1 LINE L1 6068 6249 -53 2443 88 3 0 chr5 17007 17314 -203068218 + AluY SINE Alu 1 308 -3 1576 74 35 30 chr5 17314 17365 -203068167 + L1MA1 LINE L1 6249 6298 -4 2137 108 20 7 chr5 17434 17740 -203067792 - AluSg SINE Alu 0 310 1 420 350 37 28 chr5 18619 18836 -203066696 + MIR SINE MIR 26 244 -18 1709 126 0 8 chr5 19192 19439 -203066093 - AluSp SINE Alu -68 245 1 935 167 29 23 chr5 19439 19613 -203065919 - FRAM SINE Alu -1 175 1 601 222 61 11 chr5 20299 20479 -203065053 - AluSg1 SINE Alu -120 189 1 647 179 32 32 chr5 20483 20639 -203064893 - L1MC5 LINE L1 -35 7926 7771 1454 162 85 22 chr5 20651 20923 -203064609 - AluJo SINE Alu -23 289 1 314 93 23 0 chr5 20923 20966 -203064566 - Alu SINE Alu -257 44 1 405 256 109 0 chr5 21040 21196 -203064336 - L1MC5 LINE L1 -428 7533 7361 516 275 34 22 chr5 21499 21677 -203063855 + MIR SINE MIR 34 213 -49 384 324 49 0 chr5 21980 22122 -203063410 - MIR3 SINE MIR -17 191 43 5632 151 32 23 chr5 22578 24144 -203061388 - L1M2 LINE L1 -512 5788 4211 1977 110 23 3 chr5 24304 24605 -203060927 + AluSc SINE Alu 1 307 -2 1031 65 87 0 chr5 24605 24743 -203060789 + AluSp SINE Alu 134 283 -30 42 20 0 0 chr5 25640 25689 -203059843 + GC_rich Low_complexity Low_complexity 1 49 0 2051 122 0 16 chr5 26677 26980 -203058552 + AluSx SINE Alu 3 300 -12 22 0 0 0 chr5 27264 27286 -203058246 + AT_rich Low_complexity Low_complexity 1 22 0 1103 80 7 0 chr5 27472 27610 -203057922 + AluSq/x SINE Alu 1 139 -173 367 286 25 8 chr5 27871 27990 -203057542 - MIR SINE MIR -50 212 92 369 309 79 0 chr5 28521 28660 -203056872 + MER91A DNA MER1_type 13 162 -34 2236 4 96 0 chr5 29712 29963 -203055569 - AluYa5 SINE Alu -11 300 26 337 323 186 4 chr5 30877 31140 -203054392 + L1ME LINE L1 5512 5822 -299 2493 74 0 0 chr5 31159 31456 -203054076 + AluSx SINE Alu 7 303 -9 7436 108 45 25 chr5 32104 32502 -203053030 + HSMAR2 DNA Mariner 135 524 -778 2021 121 24 3 chr5 32502 32791 -203052741 + AluSx SINE Alu 2 296 -16 7436 108 45 25 chr5 32791 33121 -203052411 + HSMAR2 DNA Mariner 524 846 -456 2217 129 0 0 chr5 33121 33416 -203052116 - AluSx SINE Alu -17 295 1 7436 108 45 25 chr5 33416 33625 -203051907 + HSMAR2 DNA Mariner 846 1049 -253 2137 115 3 23 chr5 33625 33930 -203051602 + AluSq SINE Alu 1 299 -14 7436 108 45 25 chr5 33930 34135 -203051397 + HSMAR2 DNA Mariner 1049 1302 0 996 136 13 0 chr5 34436 34591 -203050941 + FRAM SINE Alu 8 164 -12 2614 40 0 0 chr5 34593 34889 -203050643 + AluY SINE Alu 1 296 -15 810 221 55 3 chr5 35004 35197 -203050335 + MLT1F1 LTR MaLR 7 251 -298 1230 85 7 0 chr5 35371 35547 -203049985 - AluSg/x SINE Alu 0 307 131 2551 68 3 0 chr5 35548 35856 -203049676 - AluSx SINE Alu -3 309 1 410 119 13 0 chr5 35968 36044 -203049488 - L1P5 LINE L1 -703 5451 5375 265 234 0 16 chr5 36039 36103 -203049429 + L1ME4a LINE L1 5598 5660 -461 * 369 0 0 0 chr5 36103 36144 -203049388 + (CA)n Simple_repeat Simple_repeat 2 42 0 301 269 83 0 chr5 36259 36367 -203049165 + L1ME4a LINE L1 6003 6119 -2 554 203 0 70 chr5 36510 36638 -203048894 + L1MC4a LINE L1 6699 6817 -991 189 0 0 0 chr5 36663 36684 -203048848 + (GGA)n Simple_repeat Simple_repeat 3 23 0 25 0 0 0 chr5 37595 37620 -203047912 + AT_rich Low_complexity Low_complexity 1 25 0 2589 40 10 0 chr5 37844 38148 -203047384 - AluY SINE Alu -4 307 1 517 277 117 0 chr5 38609 38746 -203046786 - L1MC/D LINE L1 -2177 5631 5479 2273 120 0 0 chr5 38796 39105 -203046427 + AluSx SINE Alu 1 309 -3 860 249 175 25 chr5 39328 39722 -203045810 + MLT1H LTR MaLR 91 543 -6 2207 107 7 0 chr5 39779 40070 -203045462 + AluSx SINE Alu 1 293 -19 1569 264 114 20 chr5 40166 40659 -203044873 + MLT1E LTR MaLR 3 541 -52 2394 79 0 3 chr5 40781 41086 -203044446 - AluY SINE Alu -1 310 7 2235 97 0 4 chr5 41253 41568 -203043964 + AluSx SINE Alu 5 318 0 618 84 21 42 chr5 41759 41854 -203043678 + MSTB1 LTR MaLR 340 432 0 1619 217 72 0 chr5 41873 42260 -203043272 + MLT1E1 LTR MaLR 225 639 -15 380 220 110 0 chr5 42260 42378 -203043154 + L1M4 LINE L1 2258 2388 -3758 2428 86 7 0 chr5 42397 42701 -203042831 - AluY SINE Alu -5 306 1 1459 180 11 123 chr5 42702 42961 -203042571 + L1M4 LINE L1 4837 5123 -1023 2150 147 0 3 chr5 42961 43274 -203042258 - AluSx SINE Alu 0 312 1 1459 180 11 123 chr5 43274 43364 -203042168 + L1M4 LINE L1 5123 5221 -925 2306 105 0 0 chr5 43364 43659 -203041873 + AluSg1 SINE Alu 1 295 -14 1459 180 11 123 chr5 43659 43683 -203041849 + L1M4 LINE L1 5221 5151 -995 2227 126 3 0 chr5 43683 43992 -203041540 + AluSx SINE Alu 1 310 -2 1459 180 11 123 chr5 43992 44089 -203041443 + L1M4 LINE L1 5150 5256 -890 2350 130 15 44 chr5 44089 44289 -203041243 + MSTB LTR MaLR 1 184 -242 2977 9 0 0 chr5 44289 44604 -203040928 + AluYb8 SINE Alu 1 315 -3 2350 130 15 44 chr5 44604 44811 -203040721 + MSTB LTR MaLR 184 396 -30 989 185 0 25 chr5 44812 45012 -203040520 - AluJb SINE Alu -2 310 116 743 168 0 0 chr5 45083 45196 -203040336 + FLAM_C SINE Alu 21 133 -10 1764 148 17 27 chr5 45361 45658 -203039874 + AluJb SINE Alu 5 298 -14 234 0 0 0 chr5 46058 46084 -203039448 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2046 132 3 3 chr5 46096 46385 -203039147 + AluSq SINE Alu 1 289 -24 21 0 0 0 chr5 46385 46406 -203039126 + AT_rich Low_complexity Low_complexity 1 21 0 765 142 42 0 chr5 46409 46529 -203039003 - FLAM_A SINE Alu -8 125 1 2011 111 0 62 chr5 46547 46872 -203038660 - MER1B DNA MER1_type 0 339 35 409 362 97 13 chr5 47109 47246 -203038286 + L2 LINE L2 1991 2115 -1199 2310 95 3 10 chr5 47246 47552 -203037980 - AluSp SINE Alu -9 304 1 409 362 97 13 chr5 47552 48093 -203037439 + L2 LINE L2 2115 2726 -588 2958 76 39 7 chr5 48404 48836 -203036696 + L1PA8 LINE L1 5697 6142 -30 2215 103 10 3 chr5 49055 49365 -203036167 - AluSx SINE Alu 0 312 1 2374 91 0 7 chr5 49648 49955 -203035577 + AluSx SINE Alu 1 305 -7 1869 150 0 11 chr5 50030 50316 -203035216 + AluJb SINE Alu 1 283 -29 226 0 0 0 chr5 50316 50341 -203035191 + (CAAA)n Simple_repeat Simple_repeat 2 128 0 288 255 104 32 chr5 50384 50557 -203034975 + L1PB4 LINE L1 5638 5828 -477 294 202 0 0 chr5 50558 50619 -203034913 + L1PB4 LINE L1 6094 6154 -2 * 355 235 20 0 chr5 50611 50709 -203034823 + L1MC4a LINE L1 5812 5911 -1897 2385 108 3 0 chr5 50882 51188 -203034344 - AluSx SINE Alu -5 307 1 1306 52 0 0 chr5 51584 51739 -203033793 - AluY SINE Alu 0 311 157 2899 234 57 18 chr5 51843 52614 -203032918 - MER54A LTR ERVL -98 803 3 2072 97 11 4 chr5 53144 53440 -203032092 + AluSx SINE Alu 15 312 0 1804 153 7 17 chr5 53536 53830 -203031702 - AluSq SINE Alu -22 291 1 1025 240 16 29 chr5 54062 54100 -203031432 - MIR SINE MIR -21 241 204 1466 139 0 5 chr5 54100 54309 -203031223 - AluJb SINE Alu -18 294 87 1025 240 16 29 chr5 54309 54512 -203031020 - MIR SINE MIR -58 204 3 1351 158 132 19 chr5 54592 54857 -203030675 - AluJb SINE Alu -5 297 3 1135 240 117 36 chr5 55172 55690 -203029842 - MLT1F1 LTR MaLR 0 567 4 2693 82 26 87 chr5 55736 56501 -203029031 + SVA Other Other 396 868 -520 821 82 13 63 chr5 56994 57153 -203028379 - AluY SINE Alu -156 155 5 443 271 129 19 chr5 57158 57313 -203028219 - MLT1E LTR MaLR -452 141 13 301 194 49 13 chr5 57524 57627 -203027905 + MIR SINE MIR 15 158 -104 1422 103 42 0 chr5 57629 57843 -203027689 - MSTC LTR MaLR -205 223 1 345 135 0 0 chr5 57991 58043 -203027489 + L1MD2 LINE L1 5541 5592 -650 3102 186 57 28 chr5 58109 58199 -203027333 + L1MD2 LINE L1 5596 5682 -677 2177 119 3 0 chr5 58199 58513 -203027019 + AluSx SINE Alu 1 312 0 3102 186 57 28 chr5 58513 58898 -203026634 + L1MD2 LINE L1 5682 6102 -257 1906 154 13 19 chr5 58898 59210 -203026322 - AluJo SINE Alu -2 310 1 3102 186 57 28 chr5 59210 59453 -203026079 + L1MD2 LINE L1 6102 6336 -23 2368 92 0 19 chr5 59597 59912 -203025620 + AluSc SINE Alu 1 309 0 487 296 111 74 chr5 59921 60412 -203025120 + L2 LINE L2 2275 2746 -567 1120 113 50 134 chr5 60412 60732 -203024800 + AluJb SINE Alu 1 293 -9 487 296 111 74 chr5 60732 61237 -203024295 + L2 LINE L2 2746 3313 0 368 234 43 0 chr5 61243 61337 -203024195 + MIR SINE MIR 47 144 -118 258 136 106 15 chr5 61339 61405 -203024127 - LTR16A1 LTR ERVL -2 455 384 1251 83 21 47 chr5 61736 61928 -203023604 + AluSx SINE Alu 1 187 -125 196 194 0 0 chr5 64164 64200 -203021332 - L2 LINE L2 -17 3255 3220 2041 151 0 0 chr5 64567 64859 -203020673 + AluSx SINE Alu 1 292 -20 2523 71 0 0 chr5 65052 65349 -203020183 - AluSg SINE Alu -13 297 1 691 145 8 0 chr5 66882 66999 -203018533 - MER46A DNA MER2_type -1 235 118 410 143 312 0 chr5 67004 67081 -203018451 + AluJ/FLAM SINE Alu 2 102 -210 300 269 39 0 chr5 67287 67365 -203018167 + L2 LINE L2 3191 3271 -1 2085 118 35 0 chr5 68131 68419 -203017113 + AluSq SINE Alu 1 298 -15 2414 108 0 0 chr5 68760 69067 -203016465 - AluSq SINE Alu -6 307 1 1826 141 27 37 chr5 69264 69561 -203015971 + AluJo SINE Alu 1 294 -18 883 119 13 50 chr5 70430 70589 -203014943 + FRAM SINE Alu 1 40 0 1874 134 10 38 chr5 70589 70881 -203014651 + AluJb SINE Alu 4 287 -25 530 271 177 0 chr5 71190 71393 -203014139 + MIR SINE MIR 3 241 -21 1839 126 61 24 chr5 71822 72115 -203013417 - AluSq SINE Alu -9 304 1 613 22 0 82 chr5 74577 74712 -203010820 + (TA)n Simple_repeat Simple_repeat 2 125 0 2045 135 0 0 chr5 74933 75221 -203010311 + AluJb SINE Alu 1 288 -24 246 251 97 101 chr5 76265 76415 -203009117 - L2 LINE L2 -1 3312 3163 2992 126 37 0 chr5 76415 76876 -203008656 + L1PA16 LINE L1 5686 6163 -3 246 251 97 101 chr5 76876 76889 -203008643 - L2 LINE L2 -150 3163 3151 2109 98 7 7 chr5 76889 77174 -203008358 + AluSx SINE Alu 12 296 -16 246 251 97 101 chr5 77174 77216 -203008316 - L2 LINE L2 -162 3151 3107 2049 82 48 4 chr5 77998 78291 -203007241 + AluY SINE Alu 1 305 0 300 118 71 35 chr5 78819 78989 -203006543 + (CA)n Simple_repeat Simple_repeat 1 176 0 380 121 80 12 chr5 79071 79491 -203006041 + (CA)n Simple_repeat Simple_repeat 1 448 0 342 119 66 37 chr5 80031 80275 -203005257 + (CA)n Simple_repeat Simple_repeat 1 251 0 2501 212 60 6 chr5 81203 81825 -203003707 + LTR34 LTR ERV1 1 655 -44 2090 118 0 4 chr5 81830 82110 -203003422 + AluSx SINE Alu 1 279 -33 270 237 22 0 chr5 82885 83024 -203002508 + G-rich Low_complexity Low_complexity 4 145 0 410 261 6 0 chr5 83043 83219 -203002313 + G-rich Low_complexity Low_complexity 3 179 0 374 250 0 0 chr5 83222 83338 -203002194 + (CTGGGG)n Simple_repeat Simple_repeat 3 118 0 11052 126 9 21 chr5 84653 86449 -202999083 - L1P LINE L1 -4360 1786 11 353 189 19 39 chr5 88363 88579 -202996953 + (CACCAT)n Simple_repeat Simple_repeat 1 211 0 420 220 11 40 chr5 88605 88782 -202996750 + (CACCAT)n Simple_repeat Simple_repeat 6 177 0 2127 120 0 3 chr5 91267 91567 -202993965 - AluSg SINE Alu -11 299 1 930 291 79 34 chr5 91821 92288 -202993244 + L1ME1 LINE L1 5670 6157 -9 306 261 71 82 chr5 92293 92477 -202993055 + HAL1 LINE L1 1549 1730 -777 2253 97 3 7 chr5 92486 92785 -202992747 + AluSx SINE Alu 1 298 -14 508 298 143 24 chr5 93016 93435 -202992097 + HAL1 LINE L1 2039 2507 0 338 272 52 87 chr5 93711 93998 -202991534 + MLT1J LTR MaLR 225 501 -10 322 256 43 38 chr5 94562 94857 -202990675 + MLT1D LTR MaLR 89 389 -78 231 211 26 53 chr5 96536 96650 -202988882 + (CA)n Simple_repeat Simple_repeat 2 112 0 268 108 20 138 chr5 96763 96958 -202988574 + (CACAG)n Simple_repeat Simple_repeat 1 172 0 262 155 5 102 chr5 96909 97096 -202988436 + (CACG)n Simple_repeat Simple_repeat 3 171 0 * 201 222 0 81 chr5 97127 97312 -202988220 + (CA)n Simple_repeat Simple_repeat 1 170 0 1084 57 0 0 chr5 100051 100174 -202985358 + AluY SINE Alu 1 123 -188 1154 158 0 0 chr5 100342 100513 -202985019 + AluJb SINE Alu 135 305 -7 751 253 50 56 chr5 102579 102899 -202982633 - MLT2C1 LTR ERVL -65 332 15 233 222 0 0 chr5 103212 103257 -202982275 + MIR SINE MIR 112 156 -106 2502 194 16 8 chr5 104426 104925 -202980607 + L1MC1 LINE L1 5430 5932 -401 1366 186 37 93 chr5 104916 105466 -202980066 + L1M3 LINE L1 5065 5582 -601 * 2012 61 0 0 chr5 105566 105830 -202979702 + L1HS LINE L1 5892 6155 0 207 69 0 0 chr5 105830 105859 -202979673 + (A)n Simple_repeat Simple_repeat 1 29 0 2272 123 7 0 chr5 105960 106262 -202979270 + AluSx SINE Alu 1 304 -8 580 279 47 12 chr5 107021 107193 -202978339 - MER45A DNA AcHobo 0 178 1 354 138 55 9 chr5 107477 107586 -202977946 + CT-rich Low_complexity Low_complexity 4 117 0 27 0 0 0 chr5 107592 107619 -202977913 + AT_rich Low_complexity Low_complexity 1 27 0 1062 292 77 47 chr5 110776 111876 -202973656 - L1ME LINE L1 -486 5684 4549 1163 233 60 6 chr5 112333 112650 -202972882 + MLT1A1 LTR MaLR 20 353 -12 1709 248 128 4 chr5 113668 114184 -202971348 - MER82 DNA MER2_type -1 652 73 502 226 10 36 chr5 114488 114938 -202970594 + (CA)n Simple_repeat Simple_repeat 1 438 0 263 194 39 0 chr5 114965 115068 -202970464 + (CA)n Simple_repeat Simple_repeat 1 107 0 408 147 16 79 chr5 115150 115340 -202970192 + (CA)n Simple_repeat Simple_repeat 2 179 0 888 266 18 39 chr5 116885 117216 -202968316 - MER33 DNA MER1_type 0 324 1 252 293 0 0 chr5 117241 117316 -202968216 + MER58A DNA MER1_type 36 110 -114 4925 200 58 24 chr5 118434 118702 -202966830 - Tigger3b DNA MER2_type -1816 1212 955 2436 83 0 3 chr5 118702 119002 -202966530 + AluY SINE Alu 1 299 -12 4925 200 58 24 chr5 119002 119902 -202965630 - Tigger3b DNA MER2_type -2073 955 4 646 228 53 0 chr5 120427 120598 -202964934 + MER5A DNA MER1_type 5 184 -5 21 36 0 0 chr5 121098 121126 -202964406 + AT_rich Low_complexity Low_complexity 1 28 0 386 304 89 5 chr5 121230 121363 -202964169 + Charlie5 DNA MER1_type 2391 2550 -74 1911 161 0 32 chr5 121363 121679 -202963853 - AluJb SINE Alu -2 310 5 386 304 89 5 chr5 121679 121759 -202963773 + Charlie5 DNA MER1_type 2550 2622 -2 226 340 19 19 chr5 122182 122288 -202963244 - L3b LINE CR1 -228 1355 1250 2478 21 0 0 chr5 122354 122680 -202962852 - L1HS LINE L1 -2832 3314 2989 * 17028 16 0 0 chr5 122677 125512 -202960020 + L1HS LINE L1 3321 6155 0 24 0 0 0 chr5 125512 125536 -202959996 + AT_rich Low_complexity Low_complexity 1 24 0 532 161 0 0 chr5 125643 125724 -202959808 + AluS SINE Alu 2 82 -231 1296 202 87 39 chr5 126996 127170 -202958362 - MLT1B LTR MaLR -16 374 210 2154 107 0 20 chr5 127170 127468 -202958064 - AluSg SINE Alu -18 292 1 1296 202 87 39 chr5 127468 127649 -202957883 - MLT1B LTR MaLR -180 210 2 2298 116 7 0 chr5 128091 128393 -202957139 + AluSx SINE Alu 1 304 -8 399 290 53 24 chr5 129438 129645 -202955887 - MLT1H LTR MaLR -4 545 333 362 272 28 15 chr5 129702 129861 -202955671 - MLT1H LTR MaLR -381 168 21 336 211 279 42 chr5 131557 131747 -202953785 - MLT1E1 LTR MaLR 0 654 420 487 254 101 21 chr5 131807 131996 -202953536 - MLT1E1 LTR MaLR -383 271 68 4027 197 11 5 chr5 133125 133933 -202951599 + L1MB3 LINE L1 5368 6180 -3 205 195 0 0 chr5 134265 134306 -202951226 + A-rich Low_complexity Low_complexity 1 41 0 2586 186 10 46 chr5 134507 134594 -202950938 + L1MA8 LINE L1 5260 5349 -942 2873 16 0 0 chr5 134594 134900 -202950632 + AluYb8 SINE Alu 3 308 -10 2586 186 10 46 chr5 134900 135399 -202950133 + L1MA8 LINE L1 5349 5825 -466 1419 245 90 25 chr5 135430 135495 -202950037 + L1MA9 LINE L1 5768 5827 -485 2204 118 0 13 chr5 135495 135801 -202949731 + AluSq SINE Alu 1 302 -11 1419 245 90 25 chr5 135801 136248 -202949284 + L1MA9 LINE L1 5827 6312 0 32 75 0 0 chr5 136256 136323 -202949209 + AT_rich Low_complexity Low_complexity 1 67 0 540 318 37 16 chr5 136736 136981 -202948551 + MLT1A1 LTR MaLR 116 365 0 575 261 73 9 chr5 136987 137205 -202948327 - MLT1E1 LTR MaLR -5 649 418 354 283 51 8 chr5 137262 137424 -202948108 - MLT1E3 LTR MaLR -382 272 95 591 267 80 13 chr5 139646 140088 -202945444 + L1ME2 LINE L1 5043 5517 -645 1052 249 22 11 chr5 140092 140369 -202945163 - L1MA6 LINE L1 -36 6264 5985 438 321 26 19 chr5 140383 140621 -202944911 + L1ME2 LINE L1 5536 5780 -384 605 266 30 94 chr5 140744 141116 -202944416 + L1ME2 LINE L1 5804 6151 -13 21 0 0 0 chr5 141286 141307 -202944225 + AT_rich Low_complexity Low_complexity 1 21 0 457 174 43 0 chr5 141400 141492 -202944040 + MER85 DNA T2_type 32 127 -12 24 32 0 0 chr5 143678 143709 -202941823 + AT_rich Low_complexity Low_complexity 1 31 0 1985 100 14 60 chr5 146374 146559 -202938973 - THE1C LTR MaLR -40 335 172 2419 94 3 0 chr5 146559 146866 -202938666 + AluSg1 SINE Alu 1 308 -1 1985 100 14 60 chr5 146866 147031 -202938501 - THE1C LTR MaLR -203 172 1 197 328 0 0 chr5 148185 148243 -202937289 - MIR SINE MIR -111 151 94 444 298 82 21 chr5 149022 149351 -202936181 - L1ME4a LINE L1 0 6121 5773 433 272 151 8 chr5 149360 149599 -202935933 - MLT1C LTR MaLR -8 459 187 751 198 38 17 chr5 149764 149974 -202935558 - MLT1C LTR MaLR -176 214 1 1141 246 107 17 chr5 151423 151825 -202933707 + MLT1C LTR MaLR 1 438 -29 602 313 9 33 chr5 152666 152877 -202932655 + MIR SINE MIR 24 229 -33 552 182 19 71 chr5 153037 153191 -202932341 - MLT2D LTR ERVL -8 406 261 888 269 32 3 chr5 153341 153623 -202931909 - MLT2D LTR ERVL -108 306 17 812 200 47 0 chr5 156899 157069 -202928463 + MER58A DNA MER1_type 46 223 -1 335 224 22 60 chr5 157173 157307 -202928225 + L1ME4a LINE L1 5966 6094 -27 2162 99 0 0 chr5 157309 157633 -202927899 - AluSx SINE Alu 0 324 1 395 250 0 49 chr5 157807 157951 -202927581 + GA-rich Low_complexity Low_complexity 1 137 0 659 228 183 0 chr5 162196 162420 -202923112 - L1MB7 LINE L1 -2 6182 5918 2852 92 11 0 chr5 162433 162803 -202922729 - THE1C LTR MaLR -1 374 1 403 183 12 0 chr5 162821 162903 -202922629 + L1M4 LINE L1 5683 5765 -409 321 333 0 41 chr5 165297 165444 -202920088 - MIR SINE MIR -8 254 114 315 213 0 0 chr5 166158 166233 -202919299 + (TG)n Simple_repeat Simple_repeat 2 76 0 464 292 111 58 chr5 166442 166685 -202918847 + MLT1J LTR MaLR 245 500 -11 905 248 50 5 chr5 167689 168068 -202917464 - L1ME LINE L1 -2805 3275 2880 338 273 80 0 chr5 168168 168256 -202917276 - L1ME LINE L1 -4309 1952 1858 522 280 149 12 chr5 168264 168432 -202917100 - L1ME LINE L1 -4436 1825 1635 339 270 109 80 chr5 168441 169077 -202916455 - L1ME LINE L1 -4682 1579 837 1963 130 7 10 chr5 169077 169376 -202916156 + AluSx SINE Alu 1 298 -14 339 270 109 80 chr5 169376 169698 -202915834 - L1ME LINE L1 -5424 837 526 334 271 30 78 chr5 170050 170216 -202915316 - MLT1J2 LTR MaLR -21 429 272 226 314 24 65 chr5 170433 170557 -202914975 + L2 LINE L2 3100 3218 -54 269 335 86 18 chr5 170748 171156 -202914376 + L2 LINE L2 2572 3239 -74 2359 179 28 13 chr5 171230 171687 -202913845 + MLT2B3 LTR ERVL 1 464 -90 217 246 0 0 chr5 171687 171744 -202913788 + (TA)n Simple_repeat Simple_repeat 2 58 0 293 256 0 0 chr5 171744 171834 -202913698 - L1MC4 LINE L1 -1339 6703 6614 264 149 0 0 chr5 171921 171968 -202913564 + (CA)n Simple_repeat Simple_repeat 2 48 0 202 259 0 35 chr5 172051 172109 -202913423 + MIR SINE MIR 12 67 -195 215 173 19 0 chr5 172251 172303 -202913229 + CT-rich Low_complexity Low_complexity 1 53 0 1021 244 17 27 chr5 173046 173341 -202912191 + MLT1E LTR MaLR 302 593 0 647 205 53 16 chr5 174428 174618 -202910914 + L1MB7 LINE L1 5987 6183 -1 885 159 0 0 chr5 174697 174829 -202910703 + FLAM_C SINE Alu 1 132 -11 237 33 0 0 chr5 174896 174926 -202910606 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 250 245 136 71 chr5 174950 175105 -202910427 + L1MC5 LINE L1 7749 7913 -48 524 292 87 14 chr5 178601 178878 -202906654 - MLT1I LTR MaLR 0 409 113 696 271 138 35 chr5 179151 179491 -202906041 + MLT1E LTR MaLR 1 375 -218 771 146 0 15 chr5 179514 179644 -202905888 - THE1B LTR MaLR -1 363 236 1271 95 0 0 chr5 179645 179813 -202905719 + L1PA7 LINE L1 5983 6150 -4 2944 86 2 0 chr5 179835 180263 -202905269 - THE1B-int LTR MaLR -1151 429 1 1700 168 75 23 chr5 180263 180609 -202904923 - THE1B LTR MaLR 0 364 1 623 271 47 5 chr5 180614 180806 -202904726 + MLT1E LTR MaLR 394 593 0 327 331 14 0 chr5 180813 180955 -202904577 + MLT1E-int LTR MaLR 15 158 -1213 270 258 56 0 chr5 181094 181183 -202904349 + MLT1E-int LTR MaLR 442 535 -836 191 288 50 12 chr5 181746 181826 -202903706 + L2 LINE L2 3185 3267 -5 220 294 234 22 chr5 181933 182117 -202903415 - L2 LINE L2 -6 3307 3085 1890 218 21 42 chr5 182244 182721 -202902811 + MLT1C LTR MaLR 1 467 0 21 57 0 0 chr5 187987 188022 -202897510 + GC_rich Low_complexity Low_complexity 1 35 0 26 30 0 0 chr5 188240 188273 -202897259 + GC_rich Low_complexity Low_complexity 1 33 0 198 182 26 26 chr5 190110 190187 -202895345 + G-rich Low_complexity Low_complexity 3 79 0 26 30 0 0 chr5 192293 192326 -202893206 + GC_rich Low_complexity Low_complexity 1 33 0 408 307 0 51 chr5 193466 193756 -202891776 + C-rich Low_complexity Low_complexity 1 275 0 22 35 0 0 chr5 193900 193929 -202891603 + GC_rich Low_complexity Low_complexity 1 29 0 224 217 0 0 chr5 195403 195449 -202890083 + G-rich Low_complexity Low_complexity 5 50 0 2521 37 0 0 chr5 195687 195982 -202889550 + AluY SINE Alu 1 295 -16 201 74 0 0 chr5 196571 196598 -202888934 + (CCG)n Simple_repeat Simple_repeat 2 28 0 315 71 0 0 chr5 200197 200239 -202885293 + (T)n Simple_repeat Simple_repeat 1 42 0 220 204 0 0 chr5 200444 200493 -202885039 + CT-rich Low_complexity Low_complexity 5 53 0 232 151 12 70 chr5 200511 200597 -202884935 + CT-rich Low_complexity Low_complexity 1 81 0 252 272 10 48 chr5 201241 201344 -202884188 + G-rich Low_complexity Low_complexity 2 100 0 360 0 0 0 chr5 202415 202455 -202883077 + (CA)n Simple_repeat Simple_repeat 2 41 0 251 213 21 0 chr5 203729 203823 -202881709 + (CACG)n Simple_repeat Simple_repeat 4 99 0 433 219 0 22 chr5 203836 204019 -202881513 + (CACG)n Simple_repeat Simple_repeat 1 179 0 439 218 0 23 chr5 204049 204401 -202881131 + (CACG)n Simple_repeat Simple_repeat 1 343 0 347 233 0 14 chr5 204435 204581 -202880951 + (CACG)n Simple_repeat Simple_repeat 4 147 0 320 217 0 43 chr5 204611 204795 -202880737 + (CACG)n Simple_repeat Simple_repeat 4 179 0 * 357 263 0 0 chr5 204788 204963 -202880569 + (CA)n Simple_repeat Simple_repeat 1 175 0 217 355 0 11 chr5 205017 205110 -202880422 + (CA)n Simple_repeat Simple_repeat 1 92 0 222 191 0 0 chr5 207035 207077 -202878455 + (CGG)n Simple_repeat Simple_repeat 1 42 0 217 317 12 12 chr5 207542 207703 -202877829 + C-rich Low_complexity Low_complexity 2 162 0 265 339 0 0 chr5 210127 210254 -202875278 + HERVL LTR ERVL 907 1033 -4621 1435 166 26 12 chr5 210825 211312 -202874220 + MER50 LTR ERV1 1 711 -23 1613 177 53 29 chr5 211313 211692 -202873840 - MSTC LTR MaLR -40 388 1 463 266 120 66 chr5 211694 212028 -202873504 + HERVL LTR ERVL 1678 2029 -3735 246 347 73 0 chr5 212855 212979 -202872553 + L2 LINE L2 3178 3310 -3 476 269 62 10 chr5 213809 214017 -202871515 + MER20 DNA MER1_type 1 219 0 189 0 0 0 chr5 215148 215169 -202870363 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1484 158 57 0 chr5 220459 220705 -202864827 - AluJo SINE Alu -9 303 44 1133 303 77 0 chr5 221007 221472 -202864060 + L1MC2 LINE L1 5832 6332 -12 554 206 19 7 chr5 221478 221633 -202863899 + GA-rich Low_complexity Low_complexity 2 158 0 1072 172 62 10 chr5 221633 221842 -202863690 + AluJo SINE Alu 1 220 -92 259 211 13 40 chr5 223366 223442 -202862090 + G-rich Low_complexity Low_complexity 3 76 0 271 360 65 13 chr5 228598 228751 -202856781 + MIR3 SINE MIR 18 178 -30 332 323 45 0 chr5 228762 228917 -202856615 - MLT1B LTR MaLR -2 652 491 334 358 0 15 chr5 228932 229066 -202856466 + (CGTG)n Simple_repeat Simple_repeat 4 135 0 515 358 78 51 chr5 229726 230410 -202855122 + L1MEc LINE L1 810 1475 -4921 343 295 20 81 chr5 230543 230692 -202854840 + L1MC4 LINE L1 6563 6702 -1340 * 347 256 22 44 chr5 230682 230772 -202854760 + L1MC4 LINE L1 6615 6702 -1340 221 381 0 11 chr5 230774 230955 -202854577 + (TATATG)n Simple_repeat Simple_repeat 2 180 0 1982 110 29 0 chr5 231440 231738 -202853794 + AluSx SINE Alu 1 306 0 431 283 23 34 chr5 234661 234838 -202850694 - MLT1C LTR MaLR -227 240 66 2205 102 0 7 chr5 236334 236638 -202848894 + AluSp SINE Alu 1 302 -11 911 211 154 0 chr5 241674 241953 -202843579 - MLT1B LTR MaLR -68 322 1 21 0 0 0 chr5 244115 244136 -202841396 + AT_rich Low_complexity Low_complexity 1 21 0 236 253 0 11 chr5 244666 244753 -202840779 + G-rich Low_complexity Low_complexity 3 88 0 3055 238 63 16 chr5 245507 245648 -202839884 - Charlie1 DNA MER1_type -2 2759 2626 2044 108 14 0 chr5 245648 245935 -202839597 + AluSg SINE Alu 2 292 -18 3055 238 63 16 chr5 245935 246340 -202839192 - Charlie1 DNA MER1_type -135 2626 2241 2350 73 0 16 chr5 246340 246643 -202838889 - AluSq SINE Alu -15 298 1 3055 238 63 16 chr5 246643 247063 -202838469 - Charlie1 DNA MER1_type -520 2241 1747 270 191 0 76 chr5 247265 247397 -202838135 + (CCCCG)n Simple_repeat Simple_repeat 1 121 0 768 211 112 12 chr5 247476 247718 -202837814 - MLT1A1 LTR MaLR -99 266 1 2032 120 0 0 chr5 251203 251509 -202834023 + AluSx SINE Alu 3 308 0 1312 260 65 38 chr5 251533 252013 -202833519 + L1MDa LINE L1 20 512 -6028 296 210 49 0 chr5 252086 252167 -202833365 + L1MA7 LINE L1 6205 6289 -2 * 640 239 54 33 chr5 252160 252292 -202833240 + L1MDa LINE L1 2454 2582 -3958 2034 100 20 13 chr5 252292 252592 -202832940 + AluSg SINE Alu 6 307 -3 640 239 54 33 chr5 252592 252789 -202832743 + L1MDa LINE L1 2582 2788 -3752 534 287 16 0 chr5 252789 252918 -202832614 - ERVL LTR ERVL -3721 2043 1913 853 217 107 4 chr5 253057 253301 -202832231 + MLT1C LTR MaLR 6 274 -193 341 324 0 0 chr5 253608 253784 -202831748 + GA-rich Low_complexity Low_complexity 4 179 0 626 215 67 53 chr5 253794 254003 -202831529 + MLT1C LTR MaLR 256 467 0 322 281 78 39 chr5 255218 255346 -202830186 - L1ME4a LINE L1 -11 6110 5978 308 338 61 25 chr5 255784 255982 -202829550 - L1ME4a LINE L1 -756 5390 5186 420 340 92 33 chr5 256013 256439 -202829093 + L1MEc LINE L1 2157 2564 -3651 245 309 12 0 chr5 256547 256628 -202828904 + L1MEc LINE L1 2794 2875 -3340 697 316 112 13 chr5 256682 257372 -202828160 + L1MEc LINE L1 2991 3748 -2467 219 286 0 0 chr5 257628 257684 -202827848 + C-rich Low_complexity Low_complexity 1 56 0 305 342 70 70 chr5 258225 258538 -202826994 - HAL1 LINE L1 -948 1559 1247 339 270 0 0 chr5 258540 258778 -202826754 + CT-rich Low_complexity Low_complexity 1 238 0 1288 189 84 3 chr5 260367 260692 -202824840 + MLT1B LTR MaLR 15 379 -11 657 298 67 53 chr5 262223 262376 -202823156 + L1MC5 LINE L1 6448 6597 -1211 2309 81 3 0 chr5 262376 262673 -202822859 - AluSx SINE Alu -14 298 1 657 298 67 53 chr5 262673 263029 -202822503 + L1MC5 LINE L1 6597 6902 -906 723 185 71 28 chr5 263065 263411 -202822121 + MSTC LTR MaLR 1 427 -1 1519 216 120 40 chr5 263411 264060 -202821472 + L1MC5 LINE L1 6994 7694 -267 2464 171 23 12 chr5 264129 264557 -202820975 - Tigger2a DNA MER2_type 0 434 2 271 260 76 18 chr5 267526 267642 -202817890 + LTR50 LTR ERVL 327 447 -76 2124 165 49 180 chr5 267985 268795 -202816737 - L1MB3 LINE L1 0 6183 5480 1804 171 3 3 chr5 270091 270396 -202815136 - AluJb SINE Alu -7 305 1 1452 188 124 3 chr5 270421 270767 -202814765 + L1MC2 LINE L1 5941 6328 -16 429 260 19 0 chr5 272014 272118 -202813414 - MER117 DNA MER1_type -53 144 39 29 28 0 0 chr5 272972 273008 -202812524 + AT_rich Low_complexity Low_complexity 1 36 0 234 286 13 0 chr5 275126 275203 -202810329 + L1MC4 LINE L1 7960 8037 -5 591 248 170 47 chr5 277180 277588 -202807944 - MLT1H1 LTR MaLR 0 555 44 188 228 18 0 chr5 278348 278405 -202807127 + (TG)n Simple_repeat Simple_repeat 2 59 0 520 271 67 5 chr5 279215 279419 -202806113 - MER20 DNA MER1_type 0 219 4 239 328 106 29 chr5 279439 279787 -202805745 - LTR16C LTR ERVL -36 455 81 1272 184 104 12 chr5 280607 280934 -202804598 + MLT1A1 LTR MaLR 1 357 -8 473 249 110 29 chr5 282368 282541 -202802991 + MER58A DNA MER1_type 35 221 -3 1900 142 0 34 chr5 282741 283064 -202802468 + AluSx SINE Alu 1 312 0 1870 158 10 0 chr5 283567 283864 -202801668 + AluJb SINE Alu 1 300 -12 1258 252 102 21 chr5 283945 284377 -202801155 - MLT1C LTR MaLR 0 467 1 22 0 0 0 chr5 284396 284418 -202801114 + AT_rich Low_complexity Low_complexity 1 22 0 4703 87 17 17 chr5 285580 286214 -202799318 - MER51A LTR ERV1 0 634 1 354 325 163 0 chr5 287076 287242 -202798290 - MIR SINE MIR -7 255 63 312 180 36 18 chr5 287387 287498 -202798034 + (CAGAGA)n Simple_repeat Simple_repeat 1 113 0 180 333 61 8 chr5 289517 289649 -202795883 - L2 LINE L2 -812 2502 2364 2083 104 7 0 chr5 289763 290051 -202795481 - AluSx SINE Alu -22 290 1 197 310 133 5 chr5 290836 291039 -202794493 - L2 LINE L2 -1102 2212 1984 2016 115 0 33 chr5 291359 291664 -202793868 + AluSx SINE Alu 1 295 -17 391 321 19 19 chr5 292508 292670 -202792862 + (CGTG)n Simple_repeat Simple_repeat 1 162 0 221 263 25 12 chr5 292678 292758 -202792774 + (TG)n Simple_repeat Simple_repeat 1 81 0 352 241 0 14 chr5 293628 293773 -202791759 + (CTGGGG)n Simple_repeat Simple_repeat 1 143 0 2309 171 18 2 chr5 294144 294541 -202790991 + MER57A LTR ERV1 1 403 0 1018 247 87 20 chr5 297345 297701 -202787831 - MLT1B LTR MaLR -7 383 4 308 272 48 32 chr5 298674 298799 -202786733 - L1ME4a LINE L1 -6 6115 5989 373 242 0 0 chr5 298961 299052 -202786480 - L1ME4a LINE L1 -204 5960 5870 * 2566 269 35 34 chr5 299050 299949 -202785583 - L1M4 LINE L1 -1946 4200 3207 1833 183 0 10 chr5 299949 300261 -202785271 - AluSx SINE Alu -3 309 1 2566 269 35 34 chr5 300261 300508 -202785024 - L1M4 LINE L1 -2939 3207 2962 23 0 0 0 chr5 300614 300637 -202784895 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr5 300824 300846 -202784686 + AT_rich Low_complexity Low_complexity 1 22 0 1722 171 0 4 chr5 300848 301111 -202784421 - AluJb SINE Alu -33 279 18 2249 116 3 0 chr5 301122 301424 -202784108 - AluSx SINE Alu -9 303 1 358 310 97 57 chr5 301464 301902 -202783630 - L1 LINE L1 -2742 3404 2804 1140 195 108 7 chr5 303049 303456 -202782076 + LTR45B LTR ERV1 3 603 0 182 197 148 33 chr5 304214 304275 -202781257 - MIR SINE MIR -75 133 66 2066 277 48 2 chr5 304985 305614 -202779918 - L1MB5 LINE L1 0 6174 5517 401 86 38 153 chr5 306043 306366 -202779166 + (CGGTG)n Simple_repeat Simple_repeat 1 285 0 2038 130 0 11 chr5 308732 309040 -202776492 - AluSx SINE Alu 0 305 1 1227 183 108 37 chr5 309041 309336 -202776196 - MLT2C2 LTR ERVL -146 318 3 237 125 4 1 chr5 309371 309405 -202776127 + MLT1L LTR MaLR 277 411 -100 705 119 0 2 chr5 313019 313263 -202772269 + AluSx SINE Alu 1 294 -16 501 316 30 0 chr5 315315 315483 -202770049 - MER58A DNA MER1_type -9 215 43 1093 129 0 0 chr5 315744 315891 -202769641 + AluSg/x SINE Alu 154 300 -12 369 109 0 0 chr5 315891 315946 -202769586 + (TA)n Simple_repeat Simple_repeat 2 56 0 38 39 0 0 chr5 315954 316006 -202769526 + AT_rich Low_complexity Low_complexity 1 52 0 291 331 57 57 chr5 316038 316334 -202769198 - L1MC/D LINE L1 -1944 5864 5569 383 277 64 96 chr5 316343 316908 -202768624 - L1MEd LINE L1 -968 1522 895 2370 73 0 33 chr5 316988 317291 -202768241 + AluSg SINE Alu 1 293 -17 2132 106 3 3 chr5 318058 318370 -202767162 - AluSx SINE Alu 0 312 1 271 359 48 4 chr5 318861 319240 -202766292 + L1ME LINE L1 5202 5603 -559 1198 262 43 3 chr5 320021 320372 -202765160 - MLT1A1 LTR MaLR 0 365 1 2180 128 6 6 chr5 320551 320863 -202764669 + AluSx SINE Alu 1 312 0 2174 123 7 0 chr5 321080 321365 -202764167 + AluSx SINE Alu 1 287 -25 22 0 0 0 chr5 322853 322875 -202762657 + GC_rich Low_complexity Low_complexity 1 22 0 253 275 0 78 chr5 323641 323808 -202761724 + G-rich Low_complexity Low_complexity 3 156 0 316 291 127 45 chr5 324789 325033 -202760499 - L1MC4a LINE L1 -1487 6321 6058 1776 154 10 23 chr5 325056 325362 -202760170 - AluJo SINE Alu -8 304 3 305 282 106 65 chr5 327856 328266 -202757266 + MLT1B LTR MaLR 1 459 -8 193 130 0 74 chr5 328528 328582 -202756950 + (TTACG)n Simple_repeat Simple_repeat 4 53 0 965 188 96 135 chr5 330872 331228 -202754304 - MLT1C LTR MaLR -42 425 7 7284 161 95 8 chr5 331726 333450 -202752082 + L1MCa LINE L1 17 1984 -4442 3270 219 30 6 chr5 333445 333538 -202751994 + L1MCa LINE L1 3222 3311 -3115 * 2175 130 0 10 chr5 333538 333838 -202751694 + AluSx SINE Alu 1 297 -15 3270 219 30 6 chr5 333838 334694 -202750838 + L1MCa LINE L1 3311 4194 -2232 699 143 21 21 chr5 334751 334891 -202750641 + L1MC1 LINE L1 2043 2182 -4244 4893 188 49 60 chr5 334903 337333 -202748199 + L1MC1 LINE L1 4217 8065 0 359 200 21 11 chr5 339227 339322 -202746210 + MER53 DNA DNA 23 118 -71 309 298 152 36 chr5 339332 339661 -202745871 + MLT1H LTR MaLR 112 478 -71 2214 113 7 3 chr5 340961 341261 -202744271 + AluSx SINE Alu 1 301 -11 537 262 167 40 chr5 342149 342519 -202743013 + MER31A LTR ERV1 7 427 -39 4603 84 20 55 chr5 342851 343567 -202741965 - LTR8 LTR ERV1 0 691 1 508 203 23 16 chr5 343935 344063 -202741469 + MER5B DNA MER1_type 1 129 -49 4698 223 24 28 chr5 346156 347089 -202738443 + L1MB5 LINE L1 3987 4915 -1231 204 40 0 0 chr5 347089 347114 -202738418 + (TAA)n Simple_repeat Simple_repeat 3 27 0 4698 223 24 28 chr5 347114 347438 -202738094 + L1MB5 LINE L1 4915 5239 -907 1787 125 14 7 chr5 347438 347718 -202737814 - THE1B LTR MaLR 0 364 83 2984 217 117 8 chr5 347740 348592 -202736940 + L1MB5 LINE L1 5231 6174 0 1920 174 43 34 chr5 348606 349154 -202736378 + MLT2A2 LTR ERVL 1 554 0 266 265 20 10 chr5 349161 349263 -202736269 + L1ME LINE L1 5669 5771 -350 462 220 0 0 chr5 349408 349585 -202735947 + (TA)n Simple_repeat Simple_repeat 2 178 0 2115 59 0 0 chr5 349693 349948 -202735584 + AluY SINE Alu 54 308 -3 1953 111 4 4 chr5 350962 351233 -202734299 - AluSq SINE Alu -17 296 26 27 49 0 0 chr5 351675 351716 -202733816 + AT_rich Low_complexity Low_complexity 1 41 0 338 100 0 0 chr5 352309 352359 -202733173 - MADE1 DNA Mariner 0 80 31 271 68 23 0 chr5 352399 352443 -202733089 + MADE1 DNA Mariner 36 80 0 21 36 0 0 chr5 353387 353415 -202732117 + AT_rich Low_complexity Low_complexity 1 28 0 1483 237 95 31 chr5 354914 355588 -202729944 + MER97a DNA MER1_type? 167 883 -11 1752 146 173 19 chr5 355588 355959 -202729573 + MSTA LTR MaLR 1 428 0 413 181 96 0 chr5 355959 356053 -202729479 + MLT1B LTR MaLR 288 390 0 1262 282 120 0 chr5 356053 356577 -202728955 + L1MEc LINE L1 255 841 -5555 * 3540 258 36 33 chr5 356559 358984 -202726548 + L1MEc LINE L1 1258 3639 -2576 3653 251 65 10 chr5 358986 360237 -202725295 + L1MEc LINE L1 4086 5406 -809 2267 92 3 23 chr5 360918 361222 -202724310 - AluSx SINE Alu -14 298 1 233 322 83 0 chr5 361659 361923 -202723609 - L1MEc LINE L1 -3385 2830 2545 312 278 125 17 chr5 361964 362140 -202723392 - L1MEc LINE L1 -3874 2522 2328 243 354 0 22 chr5 363152 363333 -202722199 + (TAGG)n Simple_repeat Simple_repeat 2 178 0 203 344 0 11 chr5 365408 365498 -202720034 + (CATA)n Simple_repeat Simple_repeat 1 89 0 240 35 0 0 chr5 416207 416236 -202669296 + (GGGGA)n Simple_repeat Simple_repeat 3 31 0 311 306 45 0 chr5 416302 416436 -202669096 + MER70B LTR ERVL 15 154 -424 1241 240 52 3 chr5 416779 417141 -202668391 + MER70B LTR ERVL 199 578 0 588 257 59 21 chr5 417752 417989 -202667543 + MER33 DNA MER1_type 5 250 -74 248 196 0 36 chr5 418187 418243 -202667289 + GA-rich Low_complexity Low_complexity 3 56 0 502 188 0 23 chr5 418351 418484 -202667048 + GA-rich Low_complexity Low_complexity 4 133 0 1070 31 0 0 chr5 419041 419221 -202666311 + L1PA3 LINE L1 6002 6181 0 204 40 0 0 chr5 419582 419607 -202665925 + (A)n Simple_repeat Simple_repeat 1 25 0 805 188 0 0 chr5 419623 419751 -202665781 + AluJ SINE Alu 14 141 -171 987 224 0 0 chr5 419791 419974 -202665558 + AluJ SINE Alu 121 303 -9 207 258 32 0 chr5 421333 421395 -202664137 - L2 LINE L2 -945 2369 2306 343 283 26 91 chr5 422852 423082 -202662450 - L1MEc LINE L1 -4625 1590 1376 407 312 47 13 chr5 423140 423438 -202662094 - L1MEc LINE L1 -4862 1343 1036 2077 157 0 0 chr5 423441 423741 -202661791 - AluSx SINE Alu -12 300 1 24 0 0 0 chr5 423838 423862 -202661670 + AT_rich Low_complexity Low_complexity 1 24 0 421 259 9 0 chr5 423876 423992 -202661540 - L1MA10 LINE L1 -8 6326 6210 376 180 7 167 chr5 424105 424211 -202661321 - L1ME LINE L1 -483 5683 5606 2306 124 0 6 chr5 424211 424525 -202661007 - AluSx SINE Alu 0 312 1 376 180 7 167 chr5 424525 424568 -202660964 - L1ME LINE L1 -560 5606 5558 263 128 0 0 chr5 424563 424602 -202660930 + L1M4 LINE L1 3531 3569 -2577 * 1774 169 28 22 chr5 424602 425175 -202660357 - LTR10E LTR ERV1 -6 627 1 449 302 39 12 chr5 425175 425430 -202660102 + L1M4 LINE L1 3580 3841 -2305 1901 141 61 0 chr5 425441 425718 -202659814 + AluSq SINE Alu 1 294 -19 1126 97 58 0 chr5 425718 425872 -202659660 + AluSg/x SINE Alu 132 294 -16 366 176 0 0 chr5 425951 426019 -202659513 - L1MEc LINE L1 -5591 805 738 * 41553 32 23 1 chr5 426018 432034 -202653498 - L1PA3 LINE L1 0 6155 5 1155 316 65 15 chr5 432037 432636 -202652896 - L1MEc LINE L1 -5643 753 125 242 211 42 21 chr5 432683 432778 -202652754 + (TG)n Simple_repeat Simple_repeat 1 97 0 351 201 75 19 chr5 433618 433777 -202651755 + (CA)n Simple_repeat Simple_repeat 1 168 0 222 91 0 0 chr5 433803 433836 -202651696 + (CA)n Simple_repeat Simple_repeat 1 33 0 1858 47 0 5 chr5 435785 436000 -202649532 - AluY SINE Alu -16 295 82 587 294 60 16 chr5 436115 436367 -202649165 - HAL1 LINE L1 -2226 281 19 1349 86 0 17 chr5 440945 441120 -202644412 - AluSg/x SINE Alu -19 291 120 1274 137 0 0 chr5 441457 441671 -202643861 + AluSg/x SINE Alu 112 325 0 232 242 73 40 chr5 441858 441982 -202643550 + L1MCa LINE L1 1282 1409 -5017 16664 94 40 26 chr5 442168 444708 -202640824 + Charlie3 DNA MER1_type 1 2575 -135 345 22 0 0 chr5 444711 444756 -202640776 - MADE1 DNA Mariner -1 79 35 388 314 83 12 chr5 444787 444956 -202640576 + L1MCa LINE L1 1833 2013 -4594 189 0 0 0 chr5 445133 445154 -202640378 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1713 163 3 18 chr5 445171 445454 -202640078 - AluJb SINE Alu -33 279 1 462 315 47 17 chr5 445722 445957 -202639575 + L1ME LINE L1 637 878 -5652 1145 288 51 48 chr5 446244 446285 -202639247 + L1ME LINE L1 1085 1124 -5416 2621 50 0 0 chr5 446285 446586 -202638946 + AluY SINE Alu 1 301 -10 1145 288 51 48 chr5 446586 447109 -202638423 + L1ME LINE L1 1124 1657 -4883 2480 84 0 0 chr5 447109 447419 -202638113 + AluY SINE Alu 1 310 -1 1145 288 51 48 chr5 447419 447927 -202637605 + L1ME LINE L1 1657 2162 -4378 1489 199 201 30 chr5 447927 448420 -202637112 - LTR8A LTR ERV1 -150 577 1 793 287 45 33 chr5 448445 448779 -202636753 + L1ME2 LINE L1 5797 6134 -30 1566 228 133 79 chr5 448828 449533 -202635999 + LTR1B LTR ERV1 3 745 -81 2238 112 14 0 chr5 449863 450159 -202635373 + AluSx SINE Alu 1 300 -12 1099 224 187 45 chr5 450189 450376 -202635156 + L1M4 LINE L1 3871 4030 -2116 2204 132 0 0 chr5 450376 450679 -202634853 + AluSx SINE Alu 1 303 -9 1099 224 187 45 chr5 450679 450983 -202634549 + L1M4 LINE L1 4030 4289 -1857 1904 183 3 0 chr5 450983 451294 -202634238 + AluJb SINE Alu 1 312 0 1099 224 187 45 chr5 451294 451511 -202634021 + L1M4 LINE L1 4289 4681 -1465 562 108 0 0 chr5 451514 451597 -202633935 - AluSp SINE Alu -12 301 219 1098 126 13 0 chr5 451599 451750 -202633782 - AluSp SINE Alu -160 153 1 412 303 7 0 chr5 451756 451901 -202633631 + L1M4 LINE L1 4687 4832 -1314 326 279 12 0 chr5 451896 451982 -202633550 - L1M4 LINE L1 -2780 3366 3280 * 281 314 12 0 chr5 451986 452072 -202633460 - L1M4 LINE L1 -2780 3366 3280 331 279 12 0 chr5 452076 452162 -202633370 - L1M4 LINE L1 -2780 3366 3280 247 325 12 0 chr5 452166 452249 -202633283 - L1M4 LINE L1 -2780 3366 3283 304 322 0 0 chr5 452256 452343 -202633189 - L1M4 LINE L1 -2780 3366 3280 236 349 12 0 chr5 452347 452433 -202633099 - L1M4 LINE L1 -2780 3366 3280 321 360 0 0 chr5 452437 452562 -202632970 - L1M4 LINE L1 -2780 3366 3242 310 235 29 11 chr5 453050 453134 -202632398 - MER69 DNA AcHobo 0 2526 2445 2413 106 0 0 chr5 453134 453437 -202632095 + AluSc SINE Alu 4 306 -3 310 235 29 11 chr5 453437 453469 -202632063 - MER69 DNA AcHobo -81 2445 61 612 169 0 0 chr5 453552 453682 -202631850 + (CA)n Simple_repeat Simple_repeat 2 131 0 22 0 0 0 chr5 455894 455916 -202629616 + AT_rich Low_complexity Low_complexity 1 22 0 279 338 7 7 chr5 455936 456075 -202629457 + (CA)n Simple_repeat Simple_repeat 2 140 0 1826 256 109 77 chr5 457181 457669 -202627863 - L1MEc LINE L1 -2665 3875 3404 2236 110 7 0 chr5 457669 457959 -202627573 - AluSx SINE Alu -13 299 8 1826 256 109 77 chr5 457959 458644 -202626888 - L1MEc LINE L1 -3136 3404 2664 1075 260 82 42 chr5 458684 459236 -202626296 - L1MEc LINE L1 -4109 2612 2027 2852 3 0 7 chr5 459236 459541 -202625991 - AluYa5 SINE Alu -8 303 1 1075 260 82 42 chr5 459541 459660 -202625872 - L1MEc LINE L1 -4694 2027 1914 2099 222 55 0 chr5 459722 460213 -202625319 + L1MA4A LINE L1 1 518 -6691 547 268 98 5 chr5 460209 460403 -202625129 + L1MA4A LINE L1 1501 1724 -5485 * 3591 172 33 32 chr5 460404 460430 -202625102 + L1MA4A LINE L1 3394 3418 -3947 2364 154 9 37 chr5 460430 460866 -202624666 + MSTB LTR MaLR 1 424 -2 3591 172 33 32 chr5 460866 464005 -202621527 + L1MA4A LINE L1 3418 6634 -731 2305 123 0 0 chr5 464005 464307 -202621225 + AluSx SINE Alu 7 308 -4 3591 172 33 32 chr5 464307 465036 -202620496 + L1MA4A LINE L1 6634 7360 -5 618 309 94 18 chr5 465038 465527 -202620005 - L1MEc LINE L1 -4673 1867 1342 1660 158 42 3 chr5 465531 465841 -202619691 + MER47A DNA MER2_type 2 323 -43 25 51 0 0 chr5 465872 465911 -202619621 + AT_rich Low_complexity Low_complexity 1 39 0 595 321 61 31 chr5 465929 466019 -202619513 - L1MEc LINE L1 -5344 1377 1291 2306 105 7 0 chr5 466019 466315 -202619217 - AluSp SINE Alu -15 298 1 595 321 61 31 chr5 466315 466766 -202618766 - L1MEc LINE L1 -5430 1291 820 286 242 116 0 chr5 466795 466890 -202618642 + L1MEc LINE L1 887 992 -5404 228 279 83 25 chr5 466896 467100 -202618432 - L1MDa LINE L1 -4924 1797 1582 464 305 66 34 chr5 467143 467463 -202618069 - L1MDa LINE L1 -5038 1492 1162 2446 88 0 3 chr5 467508 467813 -202617719 + AluSx SINE Alu 1 304 -8 1827 147 3 49 chr5 467835 468141 -202617391 + AluJb SINE Alu 1 292 -20 189 0 0 0 chr5 468142 468163 -202617369 + (TA)n Simple_repeat Simple_repeat 2 22 0 194 333 118 7 chr5 468251 468404 -202617128 - MIR SINE MIR -60 202 33 247 263 0 91 chr5 469474 469573 -202615959 - MIR SINE MIR -167 95 6 539 241 10 13 chr5 469907 470064 -202615468 - MER63 DNA MER1_type -58 778 3 21 36 0 0 chr5 470120 470148 -202615384 + AT_rich Low_complexity Low_complexity 1 28 0 1637 114 25 65 chr5 472579 472939 -202612593 - MER4A LTR ERV1 0 664 261 570 133 10 10 chr5 472939 473037 -202612495 - MER4A LTR ERV1 -566 98 1 201 119 0 134 chr5 474277 474344 -202611188 + (CCCCCG)n Simple_repeat Simple_repeat 5 62 0 745 86 19 0 chr5 474911 475016 -202610516 - MER30 DNA MER1_type 0 230 124 1190 118 0 15 chr5 475016 475220 -202610312 + L1P5 LINE L1 5289 5489 -662 180 0 0 0 chr5 476756 476776 -202608756 + (TTCA)n Simple_repeat Simple_repeat 1 20 0 220 282 32 65 chr5 476780 476904 -202608628 - L2 LINE L2 -14 3299 3180 312 286 162 11 chr5 476931 477116 -202608416 + MIR SINE MIR 2 214 -48 347 205 0 43 chr5 478406 478591 -202606941 + (CA)n Simple_repeat Simple_repeat 2 178 0 306 251 0 0 chr5 478612 478840 -202606692 + (CA)n Simple_repeat Simple_repeat 1 228 0 204 326 32 21 chr5 478945 479040 -202606492 + L3 LINE CR1 1246 1341 -236 253 178 42 0 chr5 480647 480765 -202604767 + (CA)n Simple_repeat Simple_repeat 2 124 0 958 284 57 3 chr5 481485 481816 -202603716 + MLT1A2 LTR MaLR 26 374 0 2199 138 3 0 chr5 483477 483788 -202601744 + AluSq SINE Alu 1 312 -1 606 193 103 167 chr5 484301 484649 -202600883 - MLT1A2 LTR MaLR -48 326 1 320 262 2 43 chr5 484654 484748 -202600784 + MLT1C LTR MaLR 331 460 -45 535 167 113 20 chr5 484921 485071 -202600461 + ORSL DNA AcHobo 104 267 -8 776 270 138 5 chr5 485486 485878 -202599654 - MLT1C LTR MaLR 0 467 24 209 130 0 43 chr5 486580 486626 -202598906 + (TGGGGG)n Simple_repeat Simple_repeat 4 47 0 214 171 0 0 chr5 486708 486749 -202598783 + CT-rich Low_complexity Low_complexity 2 42 0 286 236 8 57 chr5 487846 487969 -202597563 + (CACG)n Simple_repeat Simple_repeat 1 117 0 223 248 0 60 chr5 489618 489735 -202595797 + (CACCC)n Simple_repeat Simple_repeat 3 112 0 369 282 91 112 chr5 489898 490238 -202595294 - L1ME4a LINE L1 -96 6025 5693 241 297 123 36 chr5 490279 490474 -202595058 - MER58C DNA MER1_type 0 215 4 305 340 77 19 chr5 490474 490630 -202594902 - L1ME4a LINE L1 -481 5640 5476 817 175 35 0 chr5 490887 491058 -202594474 - L1MA4 LINE L1 -8 6292 6116 2144 107 37 10 chr5 491061 491514 -202594018 + AluSx SINE Alu 1 461 0 3760 184 13 5 chr5 491514 492265 -202593267 - L1MA4A LINE L1 -175 6128 5372 458 175 79 21 chr5 492267 492412 -202593120 + L1ME LINE L1 5254 5402 -770 2360 120 0 0 chr5 492441 492749 -202592783 - AluSx SINE Alu -4 308 1 1997 112 10 56 chr5 492936 493240 -202592292 - AluSx SINE Alu -20 292 3 9139 35 7 0 chr5 493623 495543 -202589989 - L1PA5 LINE L1 -5 6149 4222 656 291 103 19 chr5 497570 497790 -202587742 - L1MB7 LINE L1 -73 6111 5875 2395 78 0 7 chr5 497790 498086 -202587446 - AluY SINE Alu -17 294 1 656 291 103 19 chr5 498086 498117 -202587415 - L1MB7 LINE L1 -309 5875 5848 941 156 88 34 chr5 498758 498963 -202586569 + MLT1A1 LTR MaLR 139 354 -11 405 329 43 18 chr5 499006 499170 -202586362 - L1MEd LINE L1 -5030 1089 922 402 269 157 15 chr5 501433 501630 -202583902 + L1ME LINE L1 5586 5810 -311 613 247 110 46 chr5 502314 502738 -202582794 - MLT1D LTR MaLR -10 457 30 292 157 114 0 chr5 505055 505125 -202580407 - MER5A DNA MER1_type -65 124 47 2270 78 3 3 chr5 506358 506664 -202578868 - AluSp SINE Alu -7 306 1 1235 142 43 114 chr5 506674 506999 -202578533 - AluJb SINE Alu 0 302 1 421 235 0 43 chr5 507428 507615 -202577917 + C-rich Low_complexity Low_complexity 2 180 0 778 162 0 0 chr5 510701 510818 -202574714 + FLAM_C SINE Alu 1 117 -16 1179 162 44 0 chr5 511608 511812 -202573720 + AluJb SINE Alu 85 297 -15 503 141 0 0 chr5 512053 512124 -202573408 - FLAM SINE Alu -24 119 49 1924 118 0 4 chr5 512700 512999 -202572533 - AluY SINE Alu 0 310 13 1555 92 14 0 chr5 513002 513219 -202572313 + AluSg/x SINE Alu 90 309 -1 578 277 16 41 chr5 513512 513720 -202571812 - L2 LINE L2 0 3313 3110 1920 144 10 13 chr5 513720 513840 -202571692 + AluJb SINE Alu 1 120 -192 459 0 0 0 chr5 513840 513891 -202571641 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 1920 144 10 13 chr5 513891 514083 -202571449 + AluJb SINE Alu 120 312 0 578 277 16 41 chr5 514083 514116 -202571416 - L2 LINE L2 -203 3110 3078 304 111 93 0 chr5 515084 515138 -202570394 - MADE1 DNA Mariner -21 59 1 235 366 35 25 chr5 515232 515434 -202570098 - L2 LINE L2 -199 3073 2870 288 264 33 8 chr5 515464 515585 -202569947 - L2 LINE L2 -339 2974 2851 227 179 54 18 chr5 522351 522407 -202563125 - MLT2D LTR ERVL -128 286 229 235 160 20 20 chr5 523260 523310 -202562222 - MLT2D LTR ERVL -116 298 249 189 0 0 0 chr5 524152 524173 -202561359 + (GAAA)n Simple_repeat Simple_repeat 2 22 0 204 135 0 0 chr5 524952 524989 -202560543 + (TTC)n Simple_repeat Simple_repeat 3 39 0 233 176 0 0 chr5 526894 526945 -202558587 - Alu SINE Alu -4 298 248 276 276 129 64 chr5 527403 527903 -202557629 - L1ME LINE L1 -347 5823 5303 2143 128 0 0 chr5 527914 528226 -202557306 - AluSx SINE Alu 0 312 1 297 302 83 18 chr5 528342 528511 -202557021 - L2 LINE L2 -433 2881 2702 1325 304 53 20 chr5 529171 530155 -202555377 + L1ME1 LINE L1 4976 5994 -172 2810 176 36 2 chr5 530870 531348 -202554184 - LOR1a LTR ERV1 0 497 4 743 239 46 10 chr5 532616 532813 -202552719 - L1MA10 LINE L1 -10 6324 6121 2146 97 10 16 chr5 534182 534493 -202551039 - AluSg SINE Alu -1 309 1 473 240 118 36 chr5 534695 535084 -202550448 + MER77 LTR ERV1 1 503 -102 237 262 0 0 chr5 537327 537388 -202548144 - MER20B DNA MER1_type -242 541 481 565 267 117 114 chr5 537966 538464 -202547068 - L1MEd LINE L1 -4960 1159 661 738 196 0 8 chr5 538518 538651 -202546881 - FLAM_A SINE Alu 0 133 2 580 133 0 10 chr5 539126 539224 -202546308 + MER4A LTR ERV1 2 98 -566 1624 151 9 25 chr5 539224 539575 -202545957 + MER4A LTR ERV1 261 664 0 682 210 36 6 chr5 539824 539991 -202545541 + L1MD1 LINE L1 6071 6242 0 2204 89 7 0 chr5 540342 540659 -202544873 + AluSc SINE Alu 1 319 0 1406 161 103 4 chr5 541659 541932 -202543600 - AluJb SINE Alu -12 300 1 300 301 127 18 chr5 542065 542231 -202543301 - MIR SINE MIR -50 212 29 1359 80 0 0 chr5 542579 542755 -202542777 + AluSc SINE Alu 134 309 0 621 206 0 0 chr5 542888 543014 -202542518 + MLT2B2 LTR ERVL 1 126 -389 844 231 163 10 chr5 594131 594425 -202491107 - MER44D DNA MER2_type 0 609 1 686 173 23 30 chr5 594651 594784 -202490748 - FLAM_C SINE Alu -1 132 1 213 282 59 24 chr5 600459 600544 -202484988 + L2 LINE L2 3183 3270 -2 1604 180 38 11 chr5 604691 605072 -202480460 - MLT1B LTR MaLR 0 396 1 657 238 74 0 chr5 605185 605374 -202480158 - MLT1A1 LTR MaLR -16 349 147 278 311 38 0 chr5 605746 605878 -202479654 - L1MC5 LINE L1 -1130 6831 6695 2237 84 10 0 chr5 608623 608921 -202476611 - AluSp SINE Alu -12 301 1 273 348 73 0 chr5 609145 609323 -202476209 + L1M4 LINE L1 2964 3154 -2992 231 365 0 10 chr5 609875 609979 -202475553 + L1M4 LINE L1 3853 3955 -2191 335 240 69 8 chr5 610298 610513 -202475019 + Charlie5 DNA MER1_type 2341 2624 0 213 358 0 0 chr5 611430 611606 -202473926 + (CAGGT)n Simple_repeat Simple_repeat 3 178 0 336 258 53 13 chr5 612599 612750 -202472782 + Charlie8 DNA MER1_type 76 232 -2185 440 293 47 0 chr5 613222 613372 -202472160 + MER58A DNA MER1_type 40 196 -28 326 353 0 8 chr5 614393 614526 -202471006 + (TG)n Simple_repeat Simple_repeat 1 132 0 208 258 11 11 chr5 614540 614633 -202470899 + (TG)n Simple_repeat Simple_repeat 1 93 0 278 258 12 24 chr5 614677 614844 -202470688 + (TATG)n Simple_repeat Simple_repeat 1 165 0 206 214 0 0 chr5 614851 614893 -202470639 + (TG)n Simple_repeat Simple_repeat 1 42 0 262 309 49 8 chr5 616090 616213 -202469319 - HAL1 LINE L1 -1364 1143 1016 2258 114 0 0 chr5 616973 617281 -202468251 - AluSx SINE Alu -4 308 1 445 171 170 24 chr5 619428 619582 -202465950 - MLT1D LTR MaLR -215 184 22 323 304 40 8 chr5 620765 620890 -202464642 - Looper DNA T2_type -80 1478 1350 775 263 191 3 chr5 621369 621689 -202463843 - Looper DNA T2_type -306 1252 873 788 269 82 31 chr5 621862 622407 -202463125 - Looper DNA T2_type -917 641 29 389 281 178 43 chr5 622718 623116 -202462416 - MLT1C LTR MaLR -12 455 4 666 184 11 10 chr5 630603 630897 -202454635 + (CACCC)n Simple_repeat Simple_repeat 1 294 0 235 229 16 0 chr5 630900 630961 -202454571 + (CCCCAG)n Simple_repeat Simple_repeat 2 63 0 1586 147 73 18 chr5 633958 634244 -202451288 - AluJo SINE Alu -10 302 1 217 269 0 13 chr5 636505 636583 -202448949 + CT-rich Low_complexity Low_complexity 3 79 0 460 191 107 30 chr5 638222 638353 -202447179 + Tigger1 DNA MER2_type 22 162 -2256 801 223 128 0 chr5 638353 638595 -202446937 + Tigger1 DNA MER2_type 115 387 -2031 2150 111 0 13 chr5 643600 643907 -202441625 - AluSx SINE Alu -5 307 5 304 364 6 11 chr5 647489 647665 -202437867 + (TG)n Simple_repeat Simple_repeat 1 175 0 466 260 14 41 chr5 647810 648187 -202437345 + (TG)n Simple_repeat Simple_repeat 1 366 0 339 305 0 68 chr5 648177 648367 -202437165 + (CGTG)n Simple_repeat Simple_repeat 2 178 0 * 491 261 13 22 chr5 648277 648821 -202436711 + (TG)n Simple_repeat Simple_repeat 1 538 0 375 359 0 6 chr5 653577 653758 -202431774 + (CA)n Simple_repeat Simple_repeat 1 180 0 272 392 0 0 chr5 653785 653938 -202431594 + (CA)n Simple_repeat Simple_repeat 2 154 0 219 401 0 6 chr5 654013 654185 -202431347 + (CA)n Simple_repeat Simple_repeat 2 172 0 * 313 302 0 62 chr5 654159 654351 -202431181 + (CATG)n Simple_repeat Simple_repeat 1 180 0 287 280 34 46 chr5 654401 654576 -202430956 + (CATG)n Simple_repeat Simple_repeat 1 173 0 * 332 391 0 0 chr5 654504 654678 -202430854 + (CA)n Simple_repeat Simple_repeat 2 175 0 596 317 12 32 chr5 654679 654928 -202430604 - ERVL LTR ERVL -330 5434 5191 404 350 65 16 chr5 655239 655548 -202429984 - MLT1I LTR MaLR -25 384 61 321 383 52 22 chr5 655620 655850 -202429682 - ERVL LTR ERVL -936 4828 4592 904 297 60 21 chr5 655928 656308 -202429224 - ERVL LTR ERVL -1271 4493 4099 700 294 102 9 chr5 656318 656757 -202428775 + L1MEc LINE L1 1066 1545 -4851 284 182 0 0 chr5 656762 656817 -202428715 + L1MCa LINE L1 1513 1567 -4859 284 182 0 0 chr5 656822 656877 -202428655 + L1MCa LINE L1 1513 1567 -4859 284 182 0 0 chr5 656882 656937 -202428595 + L1MCa LINE L1 1513 1567 -4859 284 182 0 0 chr5 656942 656997 -202428535 + L1MCa LINE L1 1513 1567 -4859 539 306 139 28 chr5 657002 657325 -202428207 + L1MCa LINE L1 1513 1967 -4555 929 245 167 23 chr5 657325 657366 -202428166 + L1MCa LINE L1 2224 2258 -4168 1712 158 25 3 chr5 657366 657651 -202427881 + AluSx SINE Alu 1 291 -21 929 245 167 23 chr5 657651 657932 -202427600 + L1MCa LINE L1 2258 2497 -3929 2082 134 0 6 chr5 657932 658245 -202427287 + AluSx SINE Alu 1 311 -1 929 245 167 23 chr5 658245 658707 -202426825 + L1MCa LINE L1 2497 3092 -3334 231 260 41 14 chr5 658709 658782 -202426750 - MLT1J2 LTR MaLR -304 146 72 2052 147 0 0 chr5 658906 659212 -202426320 + AluSx SINE Alu 1 306 -6 280 224 0 0 chr5 659227 659276 -202426256 + L1ME1 LINE L1 37 85 -6311 1543 268 70 25 chr5 659288 659946 -202425586 + L1ME1 LINE L1 577 1118 -4995 1734 245 63 40 chr5 659953 660631 -202424901 + L1ME1 LINE L1 2454 3147 -3068 1971 259 106 24 chr5 660650 660798 -202424734 + L1ME1 LINE L1 4692 4826 -1409 1424 193 66 39 chr5 660798 661160 -202424372 - MLT1A2 LTR MaLR -2 372 1 1971 259 106 24 chr5 661160 662275 -202423257 + L1ME1 LINE L1 4826 6078 -157 1692 189 0 0 chr5 662275 662556 -202422976 + AluSx SINE Alu 28 308 -4 1971 259 106 24 chr5 662556 662722 -202422810 + L1ME1 LINE L1 6078 6229 -6 1628 256 72 4 chr5 662818 663302 -202422230 - L1M4 LINE L1 -1429 4717 4201 324 341 67 0 chr5 663304 663483 -202422049 - ERVL LTR ERVL -1741 3913 3723 339 307 119 3 chr5 663653 663873 -202421659 - ERVL LTR ERVL -2132 3561 3267 1283 328 34 26 chr5 663913 663965 -202421567 - ERVL LTR ERVL -2532 3232 3182 784 235 10 56 chr5 663965 664161 -202421371 + MER5A DNA MER1_type 1 187 -2 1283 328 34 26 chr5 664161 664721 -202420811 - ERVL LTR ERVL -2582 3182 2615 1450 170 65 0 chr5 665877 666153 -202419379 - AluJb SINE Alu -18 294 1 716 238 105 28 chr5 666422 666708 -202418824 + MLT1A1 LTR MaLR 43 350 -15 216 280 0 0 chr5 666796 666871 -202418661 + G-rich Low_complexity Low_complexity 1 75 0 213 258 11 22 chr5 667839 667928 -202417604 + G-rich Low_complexity Low_complexity 2 89 0 24 32 0 0 chr5 668119 668150 -202417382 + GC_rich Low_complexity Low_complexity 1 31 0 407 248 0 8 chr5 668931 669060 -202416472 + (TG)n Simple_repeat Simple_repeat 1 128 0 1420 168 18 96 chr5 669413 669746 -202415786 + AluJo SINE Alu 3 309 -3 250 333 19 0 chr5 671122 671227 -202414305 - MIR SINE MIR -77 185 79 244 203 20 27 chr5 672328 672484 -202413048 + (TCTA)n Simple_repeat Simple_repeat 1 154 0 1654 167 20 73 chr5 672497 672893 -202412639 - MLT1B LTR MaLR 0 390 16 215 246 36 0 chr5 672902 673012 -202412520 + (TCTA)n Simple_repeat Simple_repeat 3 116 0 * 850 182 10 0 chr5 672994 673288 -202412244 + (TCCA)n Simple_repeat Simple_repeat 1 297 0 186 358 87 10 chr5 673373 673580 -202411952 - MIR SINE MIR -16 246 24 243 0 0 0 chr5 674072 674099 -202411433 + (CCCCCA)n Simple_repeat Simple_repeat 3 29 0 301 220 33 0 chr5 675921 676071 -202409461 + CT-rich Low_complexity Low_complexity 1 155 0 2261 93 0 3 chr5 676148 676458 -202409074 - AluSc SINE Alu 0 309 1 205 143 53 127 chr5 679359 679548 -202405984 + (TGGA)n Simple_repeat Simple_repeat 4 178 0 193 81 141 20 chr5 679577 679676 -202405856 + (TGGA)n Simple_repeat Simple_repeat 4 114 0 374 103 103 81 chr5 679787 679961 -202405571 + (TGGA)n Simple_repeat Simple_repeat 2 179 0 213 293 48 12 chr5 681753 681920 -202403612 + (CAGCC)n Simple_repeat Simple_repeat 4 176 0 * 240 337 30 0 chr5 681809 682036 -202403496 + (CCCGG)n Simple_repeat Simple_repeat 1 233 0 225 125 25 0 chr5 684942 684982 -202400550 - L1MEc LINE L1 -3162 3053 3013 3055 234 72 10 chr5 685085 686486 -202399046 - L1MEc LINE L1 -3130 3085 1634 4231 171 64 20 chr5 686497 686901 -202398631 - L1MB3 LINE L1 -8 6175 5790 1773 171 3 13 chr5 686901 687205 -202398327 - AluJb SINE Alu -11 301 1 4231 171 64 20 chr5 687205 687956 -202397576 - L1MB3 LINE L1 -393 5790 4962 407 333 15 5 chr5 687956 688157 -202397375 - L1MEc LINE L1 -5519 877 675 1934 99 4 0 chr5 691870 692133 -202393399 + AluSq SINE Alu 36 299 -14 764 117 22 34 chr5 693942 694121 -202391411 + (TGGA)n Simple_repeat Simple_repeat 1 177 0 267 107 76 23 chr5 694176 694307 -202391225 + (TAGA)n Simple_repeat Simple_repeat 4 141 0 225 254 103 40 chr5 700275 700499 -202385033 - MLT1I LTR MaLR -143 266 29 363 248 33 6 chr5 700543 700857 -202384675 + (TG)n Simple_repeat Simple_repeat 1 322 0 769 185 11 0 chr5 701638 701816 -202383716 + (CA)n Simple_repeat Simple_repeat 1 180 0 237 297 89 10 chr5 704087 704188 -202381344 + MIR SINE MIR 41 149 -59 1596 107 9 124 chr5 704271 704609 -202380923 + AluSp SINE Alu 3 301 -12 1245 258 42 11 chr5 705607 705987 -202379545 + L1MB3 LINE L1 5784 6175 -8 241 296 31 0 chr5 706937 707035 -202378497 + MER58A DNA MER1_type 19 119 0 426 204 0 0 chr5 709064 709172 -202376360 + (GGATG)n Simple_repeat Simple_repeat 3 110 0 204 40 0 0 chr5 709693 709718 -202375814 + (TG)n Simple_repeat Simple_repeat 2 26 0 228 170 0 0 chr5 709791 709844 -202375688 + (TG)n Simple_repeat Simple_repeat 2 54 0 272 310 155 0 chr5 712133 712262 -202373270 - MIR SINE MIR -49 213 65 1292 312 91 22 chr5 712923 714095 -202371437 - L1MEc LINE L1 -2919 3507 2296 2184 118 0 0 chr5 714095 714399 -202371133 - AluSx SINE Alu -6 306 3 1292 312 91 22 chr5 714399 714456 -202371076 - L1MEc LINE L1 -4130 2296 2244 381 343 61 25 chr5 714670 714868 -202370664 - L1MEc LINE L1 -4539 1887 1683 1183 58 41 35 chr5 715010 715211 -202370321 - AluY SINE Alu 0 311 119 1138 296 87 16 chr5 715650 716214 -202369318 - L1MEc LINE L1 -5748 859 256 383 299 134 5 chr5 716455 716649 -202368883 - L1MEd LINE L1 -5304 815 597 253 323 161 29 chr5 720095 720479 -202365053 + L2 LINE L2 2362 2796 -518 476 286 20 6 chr5 721502 721702 -202363830 + L1M3 LINE L1 5254 5458 -722 261 304 130 5 chr5 722060 722244 -202363288 + LTR16A1 LTR ERVL 248 454 -3 1030 218 64 123 chr5 722420 722874 -202362658 + MLT1C LTR MaLR 8 434 -33 248 235 59 69 chr5 723231 723333 -202362199 + L2 LINE L2 3172 3272 0 296 231 10 0 chr5 723333 723437 -202362095 + (TGGA)n Simple_repeat Simple_repeat 2 106 0 344 246 8 0 chr5 723473 723595 -202361937 + (TGGA)n Simple_repeat Simple_repeat 2 124 0 226 271 0 0 chr5 723598 723646 -202361886 + polypurine Low_complexity Low_complexity 4 51 0 215 263 0 0 chr5 723619 723676 -202361856 + (TGGG)n Simple_repeat Simple_repeat 3 59 0 * 572 198 12 17 chr5 723684 723856 -202361676 + (TGGA)n Simple_repeat Simple_repeat 1 171 0 189 0 0 0 chr5 723895 723916 -202361616 + (TGGA)n Simple_repeat Simple_repeat 4 24 0 902 164 0 11 chr5 723928 724203 -202361329 + (TGGA)n Simple_repeat Simple_repeat 1 272 0 247 224 17 0 chr5 725477 725535 -202359997 + MER81 DNA DNA 2 60 -54 389 285 137 23 chr5 727764 727955 -202357577 + MIR SINE MIR 11 215 -47 371 291 125 35 chr5 728704 729048 -202356484 + MLT1E LTR MaLR 105 479 -114 1166 134 32 0 chr5 729323 729509 -202356023 - AluSg/x SINE Alu -1 309 118 1828 88 149 0 chr5 729513 729774 -202355758 - AluSx SINE Alu -2 300 1 415 300 9 3 chr5 730553 730888 -202354644 + (TG)n Simple_repeat Simple_repeat 1 337 0 446 316 0 7 chr5 730922 731074 -202354458 + (TG)n Simple_repeat Simple_repeat 1 151 0 1393 226 29 9 chr5 731415 731765 -202353767 - MLT1A1 LTR MaLR -6 359 3 632 202 97 45 chr5 731793 732040 -202353492 + pTR5 LTR ERV1 738 997 -1441 3732 158 67 42 chr5 732134 732805 -202352727 + LTR12 LTR ERV1 1 688 0 674 231 89 41 chr5 733647 733966 -202351566 + L1MC4a LINE L1 6113 6476 -1332 626 193 114 0 chr5 733967 734107 -202351425 - MER45A DNA AcHobo -1 177 22 1317 265 98 55 chr5 734292 734620 -202350912 + L1MC4a LINE L1 6623 6935 -873 1712 178 7 7 chr5 734620 734913 -202350619 + AluJb SINE Alu 1 293 -19 1317 265 98 55 chr5 734913 735350 -202350182 + L1MC4a LINE L1 6935 7421 -387 626 259 40 71 chr5 735384 735681 -202349851 + L1MC4a LINE L1 7518 7805 -3 1772 109 66 0 chr5 735782 736039 -202349493 + AluSx SINE Alu 1 274 -38 669 265 55 0 chr5 736158 736377 -202349155 + MLT1C LTR MaLR 53 283 -184 1093 213 144 56 chr5 736772 737172 -202348360 - MER66A LTR ERV1 0 478 97 1425 192 91 0 chr5 737274 737582 -202347950 - MER66A-int LTR ERV1 -2 6674 6339 525 156 7 4 chr5 737633 737775 -202347757 + MER66B LTR ERV1 290 486 0 281 231 15 0 chr5 737858 737923 -202347609 - MER66A-int LTR ERV1 -287 6389 6324 610 189 0 24 chr5 737998 738125 -202347407 - MER66A-int LTR ERV1 -1852 4824 4701 1709 135 0 105 chr5 738163 738496 -202347036 - AluJb SINE Alu -4 298 1 945 258 70 36 chr5 738499 738637 -202346895 - MER66A-int LTR ERV1 -2509 4167 4035 2227 100 0 3 chr5 738637 738937 -202346595 + AluSg SINE Alu 1 299 -11 945 258 70 36 chr5 738937 739128 -202346404 - MER66A-int LTR ERV1 -2641 4035 3827 1336 74 0 0 chr5 739128 739291 -202346241 + AluSq SINE Alu 1 163 -150 4315 235 53 20 chr5 739318 740066 -202345466 - MER66A-int LTR ERV1 -2863 3813 3091 1569 110 9 9 chr5 740066 740294 -202345238 + AluSc SINE Alu 65 292 -17 4315 235 53 20 chr5 740294 740877 -202344655 - MER66A-int LTR ERV1 -3585 3091 2336 2056 199 59 5 chr5 740866 741539 -202343993 - MER66A-int LTR ERV1 -4508 2168 1424 * 4541 224 81 32 chr5 741986 743279 -202342253 - MER66A-int LTR ERV1 -5268 1408 53 1306 174 92 90 chr5 743399 743778 -202341754 - MER66A LTR ERV1 0 478 99 385 348 139 16 chr5 743926 744472 -202341060 - L1MC4a LINE L1 -1927 5881 5269 2326 90 3 3 chr5 744622 744934 -202340598 - AluSp SINE Alu -1 312 1 5037 209 33 12 chr5 744945 746446 -202339086 - L1MC1 LINE L1 -1 6332 4802 245 270 45 11 chr5 746446 746535 -202338997 + (CCCA)n Simple_repeat Simple_repeat 4 95 0 514 309 40 0 chr5 746553 746728 -202338804 - L1MC1 LINE L1 -1372 4774 4593 339 85 0 0 chr5 746731 746778 -202338754 + (CA)n Simple_repeat Simple_repeat 2 48 0 1813 118 0 0 chr5 746792 747046 -202338486 - AluSx SINE Alu -58 254 1 2190 112 10 0 chr5 747249 747553 -202337979 - AluSg SINE Alu -3 307 1 862 129 8 8 chr5 747553 747685 -202337847 - AluSg SINE Alu -178 132 1 233 301 39 19 chr5 748536 748639 -202336893 - MER20B DNA MER1_type 0 783 679 239 326 28 21 chr5 748798 748939 -202336593 - MER20B DNA MER1_type -385 398 257 2157 101 0 7 chr5 749299 749597 -202335935 - AluSx SINE Alu -16 296 1 1475 272 52 82 chr5 749894 750659 -202334873 - MER21B LTR ERV1 -107 756 15 1969 120 0 4 chr5 750662 750938 -202334594 - AluSx SINE Alu -24 288 14 213 189 33 67 chr5 751006 751096 -202334436 + (CCCCAG)n Simple_repeat Simple_repeat 2 88 0 659 179 132 24 chr5 751798 751881 -202333651 - MER45B DNA AcHobo -562 1019 946 2076 113 14 0 chr5 751881 752173 -202333359 - AluSx SINE Alu -16 296 1 659 179 132 24 chr5 752173 752301 -202333231 - MER45B DNA AcHobo -635 946 785 345 299 46 37 chr5 752744 752961 -202332571 - MER45B DNA AcHobo -247 793 575 380 258 20 0 chr5 753140 753251 -202332281 - MER45 DNA AcHobo -787 166 67 258 322 66 8 chr5 753971 754092 -202331440 + MIR SINE MIR 106 233 -29 1362 184 46 20 chr5 755098 755446 -202330086 + MLT1B LTR MaLR 1 357 -33 3069 164 72 2 chr5 755447 755964 -202329568 + MER41C LTR ERV1 2 554 0 2224 106 0 6 chr5 756587 756898 -202328634 - AluSq SINE Alu -4 309 1 686 331 48 3 chr5 756912 757226 -202328306 + L1ME1 LINE L1 5402 5729 -2079 731 258 116 68 chr5 757268 758336 -202327196 + L1MEc LINE L1 1008 2023 -4192 1905 150 0 26 chr5 758336 758643 -202326889 + AluJb SINE Alu 1 299 -13 2060 116 3 3 chr5 758645 758937 -202326595 + AluSq SINE Alu 1 292 -21 731 258 116 68 chr5 758937 759196 -202326336 + L1MEc LINE L1 2023 2561 -3654 3189 209 129 3 chr5 759277 760137 -202325395 + L1 LINE L1 1 968 -5821 3174 150 8 0 chr5 760135 760743 -202324789 + L1 LINE L1 4950 5562 -1226 * 1671 140 52 4 chr5 760743 761014 -202324518 + AluJo SINE Alu 9 292 -20 484 272 51 24 chr5 761018 761319 -202324213 + L1ME1 LINE L1 5685 6037 -129 1892 145 10 3 chr5 761319 761615 -202323917 - AluJb SINE Alu -14 298 1 484 272 51 24 chr5 761615 761749 -202323783 + L1ME1 LINE L1 6037 6166 0 2528 157 52 7 chr5 761923 762349 -202323183 - MER65A LTR ERV1 0 445 1 3676 140 28 25 chr5 762498 762693 -202322839 + MER50 LTR ERV1 24 217 -517 1660 54 45 18 chr5 762693 762915 -202322617 + L1PA6 LINE L1 5922 6149 -5 3676 140 28 25 chr5 762915 763405 -202322127 + MER50 LTR ERV1 217 711 -23 2388 58 0 0 chr5 764214 764505 -202321027 + AluY SINE Alu 2 292 -19 22 56 0 0 chr5 767394 767430 -202318102 + GC_rich Low_complexity Low_complexity 1 36 0 43 64 0 0 chr5 767561 767639 -202317893 + GC_rich Low_complexity Low_complexity 1 78 0 24 0 0 0 chr5 767809 767833 -202317699 + GC_rich Low_complexity Low_complexity 1 24 0 2182 95 3 0 chr5 769276 769570 -202315962 - AluSg SINE Alu -15 295 1 1761 149 14 10 chr5 769592 769881 -202315651 + AluJb SINE Alu 1 290 -22 279 0 0 0 chr5 770443 770474 -202315058 + (CA)n Simple_repeat Simple_repeat 1 31 0 1980 103 59 10 chr5 771417 771707 -202313825 + AluSx SINE Alu 1 304 -8 2012 126 0 7 chr5 777686 778013 -202307519 - AluSx SINE Alu 0 312 1 844 231 163 10 chr5 779765 780059 -202305473 - MER44D DNA MER2_type 0 609 1 686 173 23 30 chr5 780285 780418 -202305114 - FLAM_C SINE Alu -1 132 1 233 204 20 0 chr5 790506 790555 -202294977 - Tigger3(Golem) DNA MER2_type -2979 50 1 198 240 40 0 chr5 793050 793100 -202292432 + MER5A DNA MER1_type 47 98 -91 559 211 48 53 chr5 997199 997407 -202088125 + Charlie5 DNA MER1_type 2333 2539 -73 212 241 0 60 chr5 999964 1000047 -202085485 + C-rich Low_complexity Low_complexity 6 83 0 306 255 0 21 chr5 1000288 1000382 -202085150 + C-rich Low_complexity Low_complexity 2 93 0 455 94 118 47 chr5 1001084 1001169 -202084363 + AluJo SINE Alu 85 175 -137 2041 107 4 0 chr5 1002836 1003106 -202082426 + AluSx SINE Alu 1 271 -41 344 203 0 16 chr5 1003217 1003281 -202082251 + L2 LINE L2 3251 3313 0 395 247 62 0 chr5 1003299 1003396 -202082136 + Zaphod DNA AcHobo 500 602 -3429 201 264 190 33 chr5 1004454 1004575 -202080957 + L2 LINE L2 3128 3267 -46 635 163 0 36 chr5 1005262 1005428 -202080104 + (CCCTAA)n Simple_repeat Simple_repeat 6 165 0 388 143 0 33 chr5 1005439 1005530 -202080002 + (CCCTAA)n Simple_repeat Simple_repeat 6 93 0 207 0 0 0 chr5 1005718 1005741 -202079791 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 2817 116 7 9 chr5 1005741 1006172 -202079360 - L1PB1 LINE L1 -11 6140 5711 1701 152 0 0 chr5 1007187 1007437 -202078095 - AluSx SINE Alu -62 250 1 2195 120 3 3 chr5 1007806 1008107 -202077425 - AluSg SINE Alu -9 301 1 32 26 0 0 chr5 1008116 1008155 -202077377 + AT_rich Low_complexity Low_complexity 1 39 0 2321 104 0 0 chr5 1009952 1010259 -202075273 - AluSg SINE Alu -3 307 1 222 235 59 0 chr5 1012715 1012783 -202072749 + MIR3 SINE MIR 116 187 -21 213 246 31 0 chr5 1013266 1013331 -202072201 + (TG)n Simple_repeat Simple_repeat 1 67 0 216 277 0 15 chr5 1013457 1013522 -202072010 + T-rich Low_complexity Low_complexity 2 65 0 269 262 8 41 chr5 1013922 1014044 -202071488 + (CGGGG)n Simple_repeat Simple_repeat 1 118 0 269 294 198 6 chr5 1016091 1016268 -202069264 - MLT1J2 LTR MaLR -51 399 189 420 337 118 3 chr5 1017761 1018117 -202067415 + HAL1 LINE L1 255 651 -1856 1308 213 97 19 chr5 1018224 1018716 -202066816 + MER74A LTR ERVL 1 558 0 303 221 18 71 chr5 1018863 1018976 -202066556 - L1MC5 LINE L1 -402 7559 7453 1411 195 94 6 chr5 1019009 1019514 -202066018 + L1MB7 LINE L1 5459 6164 -20 918 287 120 11 chr5 1019519 1019968 -202065564 + HAL1 LINE L1 1291 1788 -719 187 250 16 47 chr5 1020089 1020153 -202065379 - L3 LINE CR1 -772 805 744 5371 135 6 26 chr5 1021487 1021987 -202063545 + L1PA14 LINE L1 4877 5385 -776 2289 123 0 0 chr5 1021987 1022295 -202063237 + AluY SINE Alu 1 308 -3 5371 135 6 26 chr5 1022295 1022515 -202063017 + L1PA14 LINE L1 5385 5608 -553 8600 52 20 1 chr5 1022515 1023564 -202061968 - MER11C LTR ERVK -2 1069 1 5371 135 6 26 chr5 1023564 1024123 -202061409 + L1PA14 LINE L1 5608 6133 -28 867 204 23 27 chr5 1024225 1024445 -202061087 + L1MC3 LINE L1 7077 7295 -490 1267 163 91 77 chr5 1024454 1024829 -202060703 + L1MC3 LINE L1 7403 7782 -3 606 131 0 10 chr5 1025701 1025800 -202059732 + MER4A LTR ERV1 1 98 -566 1673 147 9 13 chr5 1025800 1026147 -202059385 + MER4A LTR ERV1 261 664 0 35 41 0 0 chr5 1026649 1026698 -202058834 + AT_rich Low_complexity Low_complexity 1 49 0 194 220 85 0 chr5 1028838 1028897 -202056635 - L2 LINE L2 -71 3201 3138 9474 42 0 2 chr5 1029473 1031420 -202054112 + L1PA5 LINE L1 4207 6154 0 229 269 65 21 chr5 1032274 1032367 -202053165 - HAL1 LINE L1 -1605 902 806 609 124 0 0 chr5 1035077 1035174 -202050358 + (TG)n Simple_repeat Simple_repeat 2 98 0 26 30 0 0 chr5 1035961 1035994 -202049538 + AT_rich Low_complexity Low_complexity 1 33 0 185 270 27 40 chr5 1036085 1036159 -202049373 - MIR3 SINE MIR -52 156 84 673 250 41 37 chr5 1036868 1037112 -202048420 - L1MC2 LINE L1 -181 6163 5919 1831 184 90 3 chr5 1037164 1037870 -202047662 - L1MC/D LINE L1 -750 5396 4791 216 321 114 15 chr5 1038975 1039106 -202046426 - MIR SINE MIR -83 179 36 2347 87 3 3 chr5 1039722 1040022 -202045510 - AluSp SINE Alu -13 300 1 6905 61 13 14 chr5 1040504 1041797 -202043735 - L1PA7 LINE L1 -2 6152 4854 267 265 10 0 chr5 1041909 1042007 -202043525 + L1ME1 LINE L1 6060 6158 -8 328 297 42 36 chr5 1042480 1042645 -202042887 - MLT1K LTR MaLR -24 564 399 3673 170 40 77 chr5 1043342 1044000 -202041532 - L1MA7 LINE L1 -5 6286 5610 327 109 0 47 chr5 1044000 1044064 -202041468 - Alu SINE Alu -2 300 240 3673 170 40 77 chr5 1044064 1044325 -202041207 - L1MA7 LINE L1 -681 5610 5341 1940 227 13 13 chr5 1044324 1044774 -202040758 + L1 LINE L1 3805 4254 -1892 * 2692 86 0 3 chr5 1044774 1045136 -202040396 - THE1C LTR MaLR 0 375 15 10538 101 70 3 chr5 1045136 1046617 -202038915 - THE1C-int LTR MaLR 0 1580 1 1681 63 5 5 chr5 1046617 1046840 -202038692 - THE1C LTR MaLR 0 375 153 348 132 0 0 chr5 1046842 1046895 -202038637 + Alu SINE Alu 1 53 -248 1042 79 0 0 chr5 1046897 1047048 -202038484 + AluSg/x SINE Alu 159 309 0 1093 102 25 0 chr5 1047048 1047205 -202038327 - THE1C LTR MaLR -214 161 1 3345 176 40 22 chr5 1047206 1047975 -202037557 + L1 LINE L1 4251 5033 -1113 611 76 0 0 chr5 1047975 1048054 -202037478 + MER30B DNA MER1_type 2 80 -110 877 132 0 0 chr5 1048054 1048168 -202037364 + AluSg SINE Alu 1 114 -196 39072 69 10 8 chr5 1048176 1054309 -202031223 + L1PA6 LINE L1 8 6147 -7 1437 104 5 0 chr5 1054309 1054501 -202031031 + AluSg SINE Alu 103 295 -15 396 0 0 0 chr5 1054502 1054546 -202030986 + (CA)n Simple_repeat Simple_repeat 2 45 0 824 119 60 8 chr5 1054548 1054682 -202030850 + MER30B DNA MER1_type 90 230 0 1048 210 27 57 chr5 1054682 1055015 -202030517 + L1 LINE L1 5027 5349 -797 214 222 14 14 chr5 1055156 1055228 -202030304 + (TA)n Simple_repeat Simple_repeat 2 73 0 690 205 0 0 chr5 1056272 1056399 -202029133 - MSTC LTR MaLR -80 348 222 310 394 8 0 chr5 1057298 1057425 -202028107 - L2 LINE L2 -1 3271 3144 391 306 51 2 chr5 1057823 1058024 -202027508 - L1M4b LINE L1 -6395 460 11 1661 178 3 18 chr5 1059749 1060035 -202025497 - AluJo SINE Alu -30 282 1 805 218 35 44 chr5 1060055 1060284 -202025248 - AluJo SINE Alu -1 311 85 579 233 62 11 chr5 1060284 1060460 -202025072 - AluJb SINE Alu -62 250 66 4619 151 14 1 chr5 1060818 1061587 -202023945 + Tigger1 DNA MER2_type 75 853 -1565 1089 142 21 16 chr5 1065495 1065685 -202019847 + L1PB4 LINE L1 5958 6148 -8 6789 134 36 8 chr5 1070391 1071588 -202013944 + Tigger1 DNA MER2_type 971 2201 -217 3835 171 28 52 chr5 1071895 1072812 -202012720 - L1MC1 LINE L1 0 6333 5439 1793 129 0 80 chr5 1073466 1073624 -202011908 + AluSx SINE Alu 1 121 -191 2583 82 0 9 chr5 1073624 1073940 -202011592 + AluSp SINE Alu 1 313 0 1793 129 0 80 chr5 1073940 1074107 -202011425 + AluSx SINE Alu 121 300 -12 341 187 40 0 chr5 1074141 1074216 -202011316 + AluJ/FLAM SINE Alu 11 88 -214 2037 119 3 52 chr5 1074398 1074726 -202010806 - AluSx SINE Alu 0 312 1 1018 106 0 28 chr5 1074731 1074873 -202010659 - FRAM SINE Alu -15 161 24 1286 119 0 11 chr5 1075025 1075210 -202010322 - AluSg/x SINE Alu -9 301 119 1032 117 37 19 chr5 1075212 1075374 -202010158 - AluSg/x SINE Alu -23 289 125 306 287 57 38 chr5 1075397 1075554 -202009978 + L1MCa LINE L1 1906 2065 -4361 206 162 0 147 chr5 1078522 1078590 -202006942 + MIR SINE MIR 161 218 -44 663 248 221 34 chr5 1078674 1079171 -202006361 - MLT1G LTR MaLR 0 590 1 1996 120 39 0 chr5 1079335 1079618 -202005914 + AluSx SINE Alu 1 294 -18 581 235 6 0 chr5 1079879 1080058 -202005474 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 267 152 0 0 chr5 1080081 1080127 -202005405 + (TCCA)n Simple_repeat Simple_repeat 4 49 0 2332 98 0 3 chr5 1080130 1080427 -202005105 - AluSx SINE Alu -16 296 1 2056 96 0 14 chr5 1080481 1080761 -202004771 - AluSx SINE Alu -11 301 26 1278 175 62 15 chr5 1082789 1083094 -202002438 - AluSx SINE Alu 0 329 12 575 125 0 153 chr5 1086944 1087088 -201998444 - AluJb SINE Alu -189 123 2 1833 122 15 4 chr5 1087508 1087779 -201997753 - AluSx SINE Alu 0 312 39 1712 170 30 36 chr5 1089798 1090243 -201995289 + L1M4 LINE L1 5333 5775 -403 244 232 110 0 chr5 1090286 1090368 -201995164 - MIR SINE MIR -1 261 171 285 231 51 13 chr5 1090580 1090658 -201994874 - MLT1E3 LTR MaLR -293 237 157 597 101 4 22 chr5 1092520 1092611 -201992921 + AluSg/x SINE Alu 197 285 -25 199 0 0 0 chr5 1092611 1092633 -201992899 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 1978 148 0 10 chr5 1092642 1092952 -201992580 + AluSx SINE Alu 4 310 -2 271 250 16 0 chr5 1093129 1093193 -201992339 - Alu SINE Alu -22 279 215 23 0 0 0 chr5 1093937 1093960 -201991572 + GC_rich Low_complexity Low_complexity 1 23 0 366 23 0 0 chr5 1094482 1094525 -201991007 + (GAA)n Simple_repeat Simple_repeat 2 44 0 214 192 0 19 chr5 1098924 1098976 -201986556 + A-rich Low_complexity Low_complexity 3 53 0 255 310 18 9 chr5 1099273 1099386 -201986146 + GA-rich Low_complexity Low_complexity 3 116 0 508 190 100 0 chr5 1099556 1099656 -201985876 - MLT1E3 LTR MaLR -472 152 43 1312 203 132 33 chr5 1099656 1100095 -201985437 - MER66A LTR ERV1 0 478 97 1427 151 63 4 chr5 1100174 1100445 -201985087 - MER66A-int LTR ERV1 0 6676 6390 * 1727 128 48 93 chr5 1100439 1100836 -201984696 - MER66-int LTR ERV1 -1740 4936 4558 507 226 0 19 chr5 1100837 1100943 -201984589 - MER4D LTR ERV1 -712 160 57 547 99 165 8 chr5 1100955 1101076 -201984456 - MER66-int LTR ERV1 -2230 4446 4307 295 175 16 63 chr5 1103943 1104132 -201981400 + G-rich Low_complexity Low_complexity 1 180 0 185 50 0 100 chr5 1104369 1104409 -201981123 + (CCCCCA)n Simple_repeat Simple_repeat 3 38 0 250 69 0 128 chr5 1104456 1104558 -201980974 + (CCCCCA)n Simple_repeat Simple_repeat 4 92 0 368 274 152 19 chr5 1104660 1104970 -201980562 - MLT1C LTR MaLR -72 395 45 189 0 0 0 chr5 1105052 1105073 -201980459 + (T)n Simple_repeat Simple_repeat 1 21 0 266 238 33 26 chr5 1105706 1105857 -201979675 + (CA)n Simple_repeat Simple_repeat 1 152 0 319 257 47 0 chr5 1105892 1106063 -201979469 + (CA)n Simple_repeat Simple_repeat 1 179 0 885 101 0 25 chr5 1107290 1107409 -201978123 - AluJb SINE Alu -19 293 178 701 83 19 0 chr5 1107428 1107536 -201977996 - HY1 scRNA scRNA -1 111 2 1436 159 13 4 chr5 1108766 1108998 -201976534 - AluJo SINE Alu -78 234 1 281 398 0 0 chr5 1109360 1109531 -201976001 + C-rich Low_complexity Low_complexity 3 173 0 * 357 255 11 69 chr5 1109432 1109620 -201975912 + CT-rich Low_complexity Low_complexity 2 178 0 306 346 0 13 chr5 1109546 1109705 -201975827 + C-rich Low_complexity Low_complexity 2 158 0 * 271 310 3 57 chr5 1109895 1110150 -201975382 + C-rich Low_complexity Low_complexity 1 241 0 7206 197 31 18 chr5 1111026 1112608 -201972924 + L1MB3 LINE L1 3581 5214 -969 1917 176 7 0 chr5 1112608 1112903 -201972629 + AluJo SINE Alu 4 300 -12 7206 197 31 18 chr5 1112903 1113847 -201971685 + L1MB3 LINE L1 5214 6144 -39 2925 207 165 0 chr5 1113861 1114669 -201970863 + L1ME1 LINE L1 5222 6161 -5 1753 269 115 28 chr5 1115193 1115543 -201969989 - L1ME LINE L1 -4594 1486 1168 1680 215 0 0 chr5 1115543 1115855 -201969677 - AluJo SINE Alu 0 312 1 1753 269 115 28 chr5 1115855 1116061 -201969471 - L1ME LINE L1 -4912 1168 981 1759 130 90 31 chr5 1116061 1116415 -201969117 + THE1C LTR MaLR 1 375 0 1753 269 115 28 chr5 1116415 1116981 -201968551 - L1ME LINE L1 -5099 981 282 1704 187 3 16 chr5 1117018 1117334 -201968198 - AluJb SINE Alu 0 312 1 2268 110 0 7 chr5 1117348 1117648 -201967884 - AluSc SINE Alu -11 298 1 234 250 31 0 chr5 1117840 1117904 -201967628 - L1ME LINE L1 -5957 113 48 183 100 0 0 chr5 1117966 1117996 -201967536 + (T)n Simple_repeat Simple_repeat 1 30 0 237 239 30 0 chr5 1120599 1120666 -201964866 - LTR23 LTR ERV1 -16 421 353 416 191 76 168 chr5 1120721 1121078 -201964454 - LTR56 LTR ERV1 -121 324 1 200 204 34 34 chr5 1121491 1121579 -201963953 + CT-rich Low_complexity Low_complexity 1 88 0 1423 146 56 0 chr5 1121714 1121982 -201963550 + AluJb SINE Alu 30 312 0 2299 89 3 7 chr5 1121985 1122289 -201963243 + AluSp SINE Alu 1 303 -10 607 322 25 32 chr5 1122760 1123074 -201962458 - L3 LINE CR1 -863 714 403 2838 119 106 12 chr5 1123159 1123722 -201961810 + MER4B LTR ERV1 1 779 0 604 170 0 0 chr5 1123925 1124019 -201961513 + AluJ/FLAM SINE Alu 2 95 -217 342 265 189 0 chr5 1124296 1124428 -201961104 - MIR SINE MIR -56 206 50 2303 73 59 0 chr5 1124532 1124820 -201960712 + AluY SINE Alu 1 305 -6 245 159 23 0 chr5 1125460 1125504 -201960028 + L2 LINE L2 3269 3313 0 341 261 34 0 chr5 1125955 1126043 -201959489 + MER3 DNA MER1_type 1 91 -118 274 171 114 0 chr5 1126887 1126957 -201958575 + MER5A DNA MER1_type 47 124 -65 204 175 88 114 chr5 1127023 1127137 -201958395 + MER5A DNA MER1_type 77 187 -2 1637 91 14 5 chr5 1127164 1127374 -201958158 - AluSq SINE Alu -17 296 85 402 284 56 10 chr5 1127378 1127575 -201957957 - L1MC5 LINE L1 -796 7165 6960 230 208 21 0 chr5 1127626 1127674 -201957858 - L1MC3 LINE L1 -1049 6736 6688 2317 98 7 0 chr5 1127777 1128072 -201957460 - AluSq SINE Alu -16 297 1 822 245 94 87 chr5 1128932 1129368 -201956164 - L1MC3 LINE L1 -1958 5850 5412 467 267 76 9 chr5 1129399 1129629 -201955903 - L1MD2 LINE L1 -108 6058 5802 1991 159 0 0 chr5 1129766 1130062 -201955470 + AluJb SINE Alu 9 304 -8 600 88 0 0 chr5 1130128 1130208 -201955324 - MADE1 DNA Mariner 0 80 1 1590 120 9 19 chr5 1130332 1130593 -201954939 - MER1B DNA MER1_type -2 337 119 229 65 0 0 chr5 1130613 1130644 -201954888 - MER1B DNA MER1_type -174 123 133 248 108 0 0 chr5 1130671 1130708 -201954824 - MER1B DNA MER1_type -168 129 133 226 135 0 0 chr5 1130799 1130836 -201954696 - MER1B DNA MER1_type -168 129 133 * 248 108 0 0 chr5 1130831 1130868 -201954664 - MER1B DNA MER1_type -168 129 133 248 108 0 0 chr5 1131151 1131188 -201954344 - MER1B DNA MER1_type -168 129 133 226 135 0 0 chr5 1131183 1131220 -201954312 - MER1B DNA MER1_type -168 129 133 * 231 132 0 0 chr5 1131440 1131478 -201954054 - MER1B DNA MER1_type -168 129 132 254 105 0 0 chr5 1131536 1131574 -201953958 - MER1B DNA MER1_type -168 129 132 248 108 0 0 chr5 1131600 1131637 -201953895 - MER1B DNA MER1_type -168 129 133 * 249 108 0 0 chr5 1131632 1131669 -201953863 - MER1B DNA MER1_type -168 129 133 248 108 0 0 chr5 1131792 1131829 -201953703 - MER1B DNA MER1_type -168 129 133 225 135 0 0 chr5 1131824 1131861 -201953671 - MER1B DNA MER1_type -168 129 133 * 239 130 6 0 chr5 1131856 1131906 -201953626 - MER1B DNA MER1_type -168 129 119 226 135 0 0 chr5 1132018 1132055 -201953477 - MER1B DNA MER1_type -168 129 133 225 135 0 0 chr5 1132114 1132151 -201953381 - MER1B DNA MER1_type -168 129 133 227 83 28 0 chr5 1132242 1132278 -201953254 - MER1B DNA MER1_type -168 129 133 * 248 108 0 0 chr5 1132273 1132310 -201953222 - MER1B DNA MER1_type -168 129 133 248 108 0 0 chr5 1132305 1132342 -201953190 - MER1B DNA MER1_type -168 129 133 248 108 0 0 chr5 1132337 1132374 -201953158 - MER1B DNA MER1_type -168 129 133 248 108 0 0 chr5 1132369 1132406 -201953126 - MER1B DNA MER1_type -168 129 133 226 135 0 0 chr5 1132465 1132502 -201953030 - MER1B DNA MER1_type -168 129 133 226 135 0 0 chr5 1132497 1132534 -201952998 - MER1B DNA MER1_type -168 129 133 * 239 130 6 0 chr5 1132529 1132579 -201952953 - MER1B DNA MER1_type -168 129 119 228 91 0 0 chr5 1132598 1132631 -201952901 - MER1B DNA MER1_type -173 124 132 231 132 0 0 chr5 1132657 1132695 -201952837 - MER1B DNA MER1_type -168 129 132 225 132 0 0 chr5 1132689 1132727 -201952805 - MER1B DNA MER1_type -168 129 132 * 231 132 0 0 chr5 1132785 1132823 -201952709 - MER1B DNA MER1_type -168 129 132 242 62 0 0 chr5 1132950 1132982 -201952550 - MER1B DNA MER1_type -173 124 133 * 248 108 0 0 chr5 1132977 1133014 -201952518 - MER1B DNA MER1_type -168 129 133 229 132 0 0 chr5 1133009 1133047 -201952485 - MER1B DNA MER1_type -168 129 132 * 226 135 0 0 chr5 1133073 1133110 -201952422 - MER1B DNA MER1_type -168 129 133 * 242 108 0 0 chr5 1133105 1133142 -201952390 - MER1B DNA MER1_type -168 129 133 * 248 108 0 0 chr5 1133137 1133174 -201952358 - MER1B DNA MER1_type -168 129 133 228 91 0 0 chr5 1133206 1133239 -201952293 - MER1B DNA MER1_type -173 124 132 239 130 6 0 chr5 1133265 1133315 -201952217 - MER1B DNA MER1_type -168 129 119 228 91 0 0 chr5 1133302 1133335 -201952197 - MER1B DNA MER1_type -173 124 132 * 248 108 0 0 chr5 1133361 1133398 -201952134 - MER1B DNA MER1_type -168 129 133 226 135 0 0 chr5 1133453 1133490 -201952042 - MER1B DNA MER1_type -168 129 133 281 81 0 0 chr5 1133547 1133584 -201951948 - MER1B DNA MER1_type -168 129 133 228 118 0 0 chr5 1134485 1134519 -201951013 - MER1B DNA MER1_type -171 126 133 225 135 0 0 chr5 1134514 1134551 -201950981 - MER1B DNA MER1_type -168 129 133 * 737 178 89 13 chr5 1134607 1134764 -201950768 - MER1B DNA MER1_type -168 129 1 1505 144 137 39 chr5 1134886 1135170 -201950362 + AluJo SINE Alu 1 312 0 1140 171 83 0 chr5 1135886 1136103 -201949429 + MER46A DNA MER2_type 2 236 0 1435 178 103 11 chr5 1136251 1136532 -201949000 + AluJb SINE Alu 1 307 -5 276 233 14 40 chr5 1137761 1138055 -201947477 + CT-rich Low_complexity Low_complexity 1 286 0 230 294 12 12 chr5 1139927 1140012 -201945520 - L1ME LINE L1 -199 5922 5838 4649 193 32 67 chr5 1141438 1143130 -201942402 - L1MB3 LINE L1 -17 6100 4351 429 20 0 0 chr5 1143130 1143180 -201942352 + (TA)n Simple_repeat Simple_repeat 2 51 0 2125 101 3 3 chr5 1143180 1143478 -201942054 - AluY SINE Alu -13 298 1 4649 193 32 67 chr5 1143478 1143653 -201941879 - L1MB3 LINE L1 -1765 4352 4306 2374 76 0 0 chr5 1143653 1143956 -201941576 - AluY SINE Alu -8 303 1 4649 193 32 67 chr5 1143956 1144070 -201941462 - L1MB3 LINE L1 -1811 4306 4190 2095 137 0 0 chr5 1144072 1144378 -201941154 - AluSx SINE Alu -4 308 3 5831 75 19 82 chr5 1144386 1144741 -201940791 - L1PB1 LINE L1 0 6151 5775 505 42 32 21 chr5 1144741 1144836 -201940696 + (TA)n Simple_repeat Simple_repeat 2 97 0 5831 75 19 82 chr5 1144836 1144921 -201940611 - L1PB1 LINE L1 -376 5775 5686 240 35 0 0 chr5 1144921 1144950 -201940582 + (TG)n Simple_repeat Simple_repeat 2 30 0 5831 75 19 82 chr5 1144950 1145467 -201940065 - L1PB1 LINE L1 -465 5686 5254 4911 222 7 3 chr5 1145462 1146581 -201938951 + L1PB1 LINE L1 4144 5267 -879 * 1796 181 21 21 chr5 1146567 1146942 -201938590 - L1MB3 LINE L1 -1879 4201 3827 * 6396 58 5 11 chr5 1146942 1147749 -201937783 + L1PA6 LINE L1 5350 6154 0 325 253 65 84 chr5 1148453 1148607 -201936925 - L1ME LINE L1 -2384 5424 5274 198 71 0 0 chr5 1148774 1148802 -201936730 + (TC)n Simple_repeat Simple_repeat 2 29 0 4954 158 56 8 chr5 1149202 1150064 -201935468 - MER4D LTR ERV1 0 903 1 11028 180 84 37 chr5 1150086 1150397 -201935135 + L1M4c LINE L1 14 309 -6073 4742 123 47 5 chr5 1150397 1151145 -201934387 + MER4E LTR ERV1 1 779 0 11028 180 84 37 chr5 1151145 1151483 -201934049 + L1M4c LINE L1 309 630 -5752 360 0 0 0 chr5 1151483 1151523 -201934009 + (TAA)n Simple_repeat Simple_repeat 3 42 0 11028 180 84 37 chr5 1151523 1151546 -201933986 + L1M4c LINE L1 630 650 -5732 3257 147 20 61 chr5 1151546 1152184 -201933348 + LTR9 LTR ERV1 1 612 0 11028 180 84 37 chr5 1152184 1153728 -201931804 + L1M4c LINE L1 650 2120 -4262 2025 99 25 0 chr5 1153728 1154012 -201931520 - AluSx SINE Alu -21 291 1 11028 180 84 37 chr5 1154012 1155511 -201930021 + L1M4c LINE L1 2120 3916 -2466 1617 253 144 43 chr5 1155504 1156141 -201929391 - L1MB3 LINE L1 -3215 2865 2294 * 1938 114 4 4 chr5 1156141 1156459 -201929073 + AluSx SINE Alu 1 318 0 1617 253 144 43 chr5 1156459 1157593 -201927939 - L1MB3 LINE L1 -3786 2294 829 2444 59 0 3 chr5 1157593 1157896 -201927636 - AluY SINE Alu -9 302 1 1617 253 144 43 chr5 1157896 1158052 -201927480 - L1MB3 LINE L1 -5251 829 690 1288 184 10 37 chr5 1158605 1158899 -201926633 - AluJo SINE Alu -26 286 1 889 77 77 8 chr5 1159426 1159556 -201925976 + MER85 DNA T2_type 1 139 0 226 205 222 8 chr5 1159584 1159701 -201925831 - L1 LINE L1 -3316 2830 2689 1983 121 0 29 chr5 1159701 1160008 -201925524 + AluJb SINE Alu 1 298 -14 962 128 27 0 chr5 1160131 1160280 -201925252 + Tigger1 DNA MER2_type 1516 1668 -750 316 160 120 0 chr5 1160280 1160355 -201925177 + L1MEc LINE L1 2008 2091 -4305 276 296 103 25 chr5 1160568 1160811 -201924721 - L1 LINE L1 -3598 2548 2287 2087 112 7 0 chr5 1160995 1161290 -201924242 - AluSx SINE Alu -15 297 1 21 0 0 0 chr5 1161475 1161496 -201924036 + AT_rich Low_complexity Low_complexity 1 21 0 14843 133 36 11 chr5 1162347 1164142 -201921390 + Tigger1 DNA MER2_type 1 1871 -547 1850 108 4 0 chr5 1164142 1164400 -201921132 + AluSx SINE Alu 39 297 -15 14843 133 36 11 chr5 1164400 1164963 -201920569 + Tigger1 DNA MER2_type 1871 2418 0 269 299 46 17 chr5 1168179 1168353 -201917179 + (TG)n Simple_repeat Simple_repeat 2 180 0 342 210 10 115 chr5 1168417 1168617 -201916915 + (TG)n Simple_repeat Simple_repeat 2 180 0 289 228 21 98 chr5 1168771 1168964 -201916568 + (TG)n Simple_repeat Simple_repeat 2 179 0 1665 112 4 27 chr5 1169441 1169701 -201915831 - AluSg SINE Alu -5 305 52 2130 141 52 12 chr5 1174868 1175271 -201910261 + L1MA4 LINE L1 5871 6289 -11 1143 187 82 12 chr5 1176100 1176322 -201909210 - MSTA LTR MaLR 0 428 189 1259 135 0 42 chr5 1176322 1176537 -201908995 + MER75 DNA T2_type 3 208 -306 198 247 161 25 chr5 1176574 1176655 -201908877 - MIR SINE MIR -3 259 168 5138 214 42 40 chr5 1179037 1179967 -201905565 + L1MB5 LINE L1 3731 4658 -1488 387 0 0 0 chr5 1179967 1180010 -201905522 + (TA)n Simple_repeat Simple_repeat 1 43 0 2136 102 0 3 chr5 1180013 1180306 -201905226 - AluSg SINE Alu -18 292 1 5138 214 42 40 chr5 1180306 1180419 -201905113 + L1MB5 LINE L1 4659 4770 -1376 2081 86 20 3 chr5 1180419 1180532 -201905000 + AluSc SINE Alu 11 121 -188 387 0 0 0 chr5 1180532 1180575 -201904957 + (CA)n Simple_repeat Simple_repeat 2 44 0 2081 86 20 3 chr5 1180575 1180753 -201904779 + AluSc SINE Alu 121 307 -2 5138 214 42 40 chr5 1180753 1181115 -201904417 + L1MB5 LINE L1 4770 5144 -1002 2596 218 36 14 chr5 1181151 1181784 -201903748 + L1MB5 LINE L1 5418 6064 -110 832 164 0 0 chr5 1182112 1182252 -201903280 + L1MB5 LINE L1 6023 6162 -12 219 250 26 53 chr5 1182879 1182955 -201902577 - MIR SINE MIR 0 262 189 199 204 19 19 chr5 1184308 1184362 -201901170 - MIR SINE MIR -130 132 79 258 279 154 44 chr5 1185011 1185147 -201900385 + MIR SINE MIR 36 186 -76 347 297 35 0 chr5 1186620 1186765 -201898767 + C-rich Low_complexity Low_complexity 5 154 0 214 297 16 16 chr5 1188624 1188688 -201896844 - L2 LINE L2 -84 3188 3125 267 314 26 33 chr5 1189370 1189523 -201896009 + LTR67 LTR ERVL 384 535 -22 494 272 201 10 chr5 1189549 1189843 -201895689 - L2 LINE L2 -858 2456 2107 6236 217 49 15 chr5 1189860 1191975 -201893557 + L1MB4 LINE L1 3581 5752 -428 891 254 61 7 chr5 1191976 1192256 -201893276 + L1MB4 LINE L1 5886 6180 0 683 269 126 31 chr5 1192359 1192716 -201892816 - L2 LINE L2 -1212 2102 1712 253 258 162 0 chr5 1193395 1193562 -201891970 + L2 LINE L2 2867 3060 -253 1917 79 16 4 chr5 1194124 1194378 -201891154 + L1PA6 LINE L1 5898 6154 0 331 253 65 84 chr5 1195082 1195236 -201890296 - L1M LINE L1 -2384 5424 5274 198 71 0 0 chr5 1195403 1195431 -201890101 + (TC)n Simple_repeat Simple_repeat 2 29 0 5002 158 56 8 chr5 1195831 1196693 -201888839 - MER4D LTR ERV1 0 903 1 10368 186 81 34 chr5 1196715 1197026 -201888506 + L1M4c LINE L1 14 309 -6073 4750 123 47 5 chr5 1197026 1197774 -201887758 + MER4E LTR ERV1 1 779 0 10368 186 81 34 chr5 1197774 1198112 -201887420 + L1M4c LINE L1 309 630 -5752 414 0 0 0 chr5 1198112 1198158 -201887374 + (TAA)n Simple_repeat Simple_repeat 3 48 0 10368 186 81 34 chr5 1198158 1198182 -201887350 + L1M4c LINE L1 630 651 -5731 3311 147 20 61 chr5 1198182 1198820 -201886712 + LTR9 LTR ERV1 1 612 0 10368 186 81 34 chr5 1198820 1200364 -201885168 + L1M4c LINE L1 651 2122 -4260 2166 99 25 0 chr5 1200364 1200648 -201884884 - AluSx SINE Alu -21 291 1 10368 186 81 34 chr5 1200648 1202148 -201883384 + L1M4c LINE L1 2122 3916 -2466 1471 246 131 48 chr5 1202141 1202778 -201882754 - L1ME LINE L1 -864 1577 2088 * 2072 114 4 4 chr5 1202778 1203096 -201882436 + AluSx SINE Alu 1 318 0 1471 246 131 48 chr5 1203096 1203891 -201881641 - L1ME LINE L1 -352 2089 1362 445 296 58 36 chr5 1203903 1204230 -201881302 - L1ME LINE L1 -4981 1089 841 2590 59 0 3 chr5 1204230 1204533 -201880999 - AluY SINE Alu -9 302 1 445 296 58 36 chr5 1204533 1204689 -201880843 - L1ME LINE L1 -5229 841 690 1425 184 10 37 chr5 1205242 1205536 -201879996 - AluJo SINE Alu -26 286 1 428 248 223 34 chr5 1206003 1206063 -201879469 - L1ME LINE L1 -3213 2867 2820 889 77 77 8 chr5 1206063 1206193 -201879339 + MER85 DNA T2_type 1 139 0 428 248 223 34 chr5 1206193 1206338 -201879194 - L1ME LINE L1 -3260 2820 2623 2121 121 0 29 chr5 1206338 1206644 -201878888 + AluJb SINE Alu 1 297 -15 913 128 27 0 chr5 1206767 1206916 -201878616 + Tigger1 DNA MER2_type 1516 1668 -750 299 160 120 0 chr5 1206916 1206991 -201878541 + L1MEc LINE L1 2008 2091 -4305 235 300 103 25 chr5 1207204 1207447 -201878085 - L1ME LINE L1 -3598 2482 2221 2230 112 7 0 chr5 1207631 1207926 -201877606 - AluSx SINE Alu -15 297 1 21 0 0 0 chr5 1208111 1208132 -201877400 + AT_rich Low_complexity Low_complexity 1 21 0 14907 133 36 11 chr5 1208983 1210778 -201874754 + Tigger1 DNA MER2_type 1 1871 -547 1978 108 4 0 chr5 1210778 1211036 -201874496 + AluSx SINE Alu 39 297 -15 14907 133 36 11 chr5 1211036 1211599 -201873933 + Tigger1 DNA MER2_type 1871 2418 0 290 279 52 23 chr5 1214815 1214987 -201870545 + (TG)n Simple_repeat Simple_repeat 2 178 0 342 210 10 115 chr5 1215051 1215251 -201870281 + (TG)n Simple_repeat Simple_repeat 2 180 0 289 228 21 98 chr5 1215405 1215598 -201869934 + (TG)n Simple_repeat Simple_repeat 2 179 0 1792 112 4 27 chr5 1216075 1216335 -201869197 - AluSg SINE Alu -5 305 52 3480 191 36 3 chr5 1218684 1219398 -201866134 + L1MB3 LINE L1 5407 6144 -39 2716 214 142 1 chr5 1219412 1220226 -201865306 + L1ME1 LINE L1 5222 6161 -5 1681 268 115 30 chr5 1220743 1221101 -201864431 - L1ME LINE L1 -4588 1492 1166 1673 215 0 0 chr5 1221101 1221413 -201864119 - AluJo SINE Alu 0 312 1 1681 268 115 30 chr5 1221413 1221619 -201863913 - L1ME LINE L1 -4914 1166 979 1894 122 93 34 chr5 1221619 1221973 -201863559 + THE1C LTR MaLR 1 375 0 1681 268 115 30 chr5 1221973 1222539 -201862993 - L1ME LINE L1 -5101 979 282 1701 187 3 16 chr5 1222576 1222892 -201862640 - AluJb SINE Alu 0 312 1 2257 110 0 7 chr5 1222906 1223206 -201862326 - AluSc SINE Alu -11 298 1 228 250 31 0 chr5 1223398 1223462 -201862070 - L1ME LINE L1 -5957 113 48 183 100 0 0 chr5 1223524 1223554 -201861978 + (T)n Simple_repeat Simple_repeat 1 30 0 230 239 30 0 chr5 1226157 1226224 -201859308 - LTR23 LTR ERV1 -16 421 353 384 188 76 168 chr5 1226279 1226636 -201858896 - LTR56 LTR ERV1 -121 324 1 380 153 34 117 chr5 1227049 1227349 -201858183 + CT-rich Low_complexity Low_complexity 1 275 0 250 234 16 120 chr5 1227284 1227476 -201858056 + C-rich Low_complexity Low_complexity 5 176 0 * 282 246 5 128 chr5 1227442 1227645 -201857887 + CT-rich Low_complexity Low_complexity 1 178 0 448 255 57 6 chr5 1227723 1227880 -201857652 - HAL1 LINE L1 -725 1782 1618 397 321 55 18 chr5 1228314 1228479 -201857053 - HAL1 LINE L1 -1300 1207 1037 1390 126 38 25 chr5 1233065 1233322 -201852210 - MER1B DNA MER1_type 0 339 119 226 139 0 0 chr5 1233394 1233430 -201852102 - MER1B DNA MER1_type -168 129 134 226 139 0 0 chr5 1233458 1233494 -201852038 - MER1B DNA MER1_type -168 129 134 243 108 0 0 chr5 1233614 1233651 -201851881 - MER1B DNA MER1_type -168 129 133 276 81 0 0 chr5 1233676 1233713 -201851819 - MER1B DNA MER1_type -168 129 133 225 57 57 0 chr5 1233863 1233898 -201851634 - MER1B DNA MER1_type -168 129 133 709 178 89 13 chr5 1234735 1234892 -201850640 - MER1B DNA MER1_type -168 129 1 1502 144 137 39 chr5 1235014 1235298 -201850234 + AluJo SINE Alu 1 312 0 1213 171 83 0 chr5 1236011 1236228 -201849304 + MER46A DNA MER2_type 2 236 0 1426 178 103 11 chr5 1236376 1236657 -201848875 + AluJb SINE Alu 1 307 -5 304 242 0 30 chr5 1237980 1238046 -201847486 - HAL1 LINE L1 -1344 1163 1100 1518 148 81 4 chr5 1238053 1238324 -201847208 - AluJb SINE Alu -20 292 1 2198 106 23 3 chr5 1238368 1238670 -201846862 + AluSx SINE Alu 1 308 -4 506 331 74 8 chr5 1242050 1242307 -201843225 - L1M4 LINE L1 -1701 4445 4172 3122 104 89 4 chr5 1242308 1242778 -201842754 - MER9 LTR ERVK 0 511 2 16454 92 22 1 chr5 1242779 1245435 -201840097 - HERVK9 LTR ERVK 0 8033 3304 1093 155 0 0 chr5 1245425 1245599 -201839933 - HERVK9 LTR ERVK -2487 3429 3256 * 393 152 0 0 chr5 1245600 1245666 -201839866 - HERVK9 LTR ERVK -2595 3321 3256 372 171 0 0 chr5 1245663 1245733 -201839799 - HERVK9 LTR ERVK -2591 3325 3256 * 402 136 0 0 chr5 1245734 1245800 -201839732 - HERVK9 LTR ERVK -2595 3321 3256 388 167 56 22 chr5 1245797 1245887 -201839645 - HERVK9 LTR ERVK -2591 3325 3233 * 364 159 0 0 chr5 1245864 1245933 -201839599 - HERVK9 LTR ERVK -2591 3325 3257 * 1050 123 0 0 chr5 1245998 1246153 -201839379 - HERVK9 LTR ERVK -2591 3325 3171 588 62 12 0 chr5 1246149 1246230 -201839302 - HERVK9 LTR ERVK -2681 3235 3154 * 23982 79 6 4 chr5 1246221 1249449 -201836083 - HERVK9 LTR ERVK -2684 3232 1 2961 96 123 9 chr5 1249449 1249906 -201835626 - MER9 LTR ERVK 0 511 3 224 289 91 33 chr5 1249969 1250090 -201835442 + L2 LINE L2 3142 3269 -3 443 263 51 0 chr5 1250491 1250609 -201834923 - MER3 DNA MER1_type -78 131 8 243 276 110 8 chr5 1250697 1250824 -201834708 + MLT1J LTR MaLR 93 232 -279 2329 180 43 24 chr5 1251098 1251565 -201833967 + L1PB4 LINE L1 5679 6154 -2 21 57 0 19 chr5 1252010 1252032 -201833500 + AT_rich Low_complexity Low_complexity 1 22 -30 2252 115 3 0 chr5 1252032 1252327 -201833205 + AluSx SINE Alu 1 296 -16 21 57 0 19 chr5 1252327 1252357 -201833175 + AT_rich Low_complexity Low_complexity 22 52 0 1862 131 31 17 chr5 1252528 1252819 -201832713 - AluSx SINE Alu -17 295 1 2025 137 0 16 chr5 1253119 1253425 -201832107 - AluJb SINE Alu -11 301 1 410 160 25 14 chr5 1253456 1253654 -201831878 + AluJo SINE Alu 20 294 -18 392 235 39 0 chr5 1253862 1253964 -201831568 - L1ME1 LINE L1 -182 6378 6273 1571 151 65 48 chr5 1255153 1255445 -201830087 + AluJo SINE Alu 1 297 -15 2136 129 3 0 chr5 1255778 1256072 -201829460 + AluSx SINE Alu 1 295 -17 378 289 35 0 chr5 1257087 1257201 -201828331 - L2 LINE L2 -2 3311 3194 1556 121 62 107 chr5 1257269 1257625 -201827907 + MER2 DNA MER2_type 1 340 -5 2674 50 0 0 chr5 1257657 1257960 -201827572 - AluY SINE Alu -4 307 5 469 254 208 10 chr5 1259058 1259255 -201826277 - MIR SINE MIR -10 252 17 1744 183 0 32 chr5 1259581 1259892 -201825640 + AluJb SINE Alu 1 301 -11 2434 98 0 0 chr5 1260518 1260824 -201824708 - AluSx SINE Alu -6 306 1 2194 121 3 7 chr5 1261453 1261759 -201823773 - AluSx SINE Alu -7 305 1 22 35 0 0 chr5 1261816 1261845 -201823687 + AT_rich Low_complexity Low_complexity 1 29 0 796 177 118 23 chr5 1261860 1262080 -201823452 - L1MA9 LINE L1 -5 6307 6067 3932 160 52 33 chr5 1262397 1263326 -201822206 - L1MA9 LINE L1 -204 6108 5152 205 244 44 0 chr5 1263474 1263519 -201822013 + MIR3 SINE MIR 110 156 -52 406 249 124 23 chr5 1264272 1264449 -201821083 - MER3 DNA MER1_type -14 195 1 1297 242 33 41 chr5 1267225 1267712 -201817820 - L1ME1 LINE L1 -743 5797 5375 870 302 129 11 chr5 1267725 1268166 -201817366 - L1ME1 LINE L1 -1942 4598 4106 2202 204 125 42 chr5 1268449 1269397 -201816135 - L1ME1 LINE L1 -5180 1360 16 227 254 167 53 chr5 1269400 1269514 -201816018 - MIR3 SINE MIR -79 129 3 189 247 67 79 chr5 1273082 1273171 -201812361 - MIR SINE MIR -56 206 119 * 222 303 15 0 chr5 1273167 1273233 -201812299 - MIR SINE MIR -49 213 147 801 275 84 10 chr5 1273240 1273711 -201811821 - MER68 LTR ERV1 -5 557 12 252 250 43 43 chr5 1273731 1273823 -201811709 - MIR SINE MIR -146 116 25 2215 104 13 16 chr5 1274300 1274609 -201810923 - AluSx SINE Alu -4 308 1 2093 118 10 0 chr5 1274969 1275258 -201810274 - AluSx SINE Alu -20 292 1 245 324 37 37 chr5 1276735 1276871 -201808661 + MIR SINE MIR 117 252 -10 2147 122 26 0 chr5 1279307 1279610 -201805922 + AluSx SINE Alu 1 311 -1 2518 64 0 3 chr5 1280833 1281130 -201804402 + AluY SINE Alu 1 296 -15 219 231 0 39 chr5 1283435 1283513 -201802019 + (CCCCG)n Simple_repeat Simple_repeat 2 76 0 608 206 0 0 chr5 1284519 1284645 -201800887 - MLT2B1 LTR ERVL -394 126 1 1363 78 0 22 chr5 1284780 1284960 -201800572 - AluSc SINE Alu 0 309 134 204 267 0 56 chr5 1284963 1285053 -201800479 + L2 LINE L2 3224 3308 -5 317 283 63 61 chr5 1285272 1285475 -201800057 + MIR SINE MIR 14 212 -50 1489 159 101 7 chr5 1285608 1285885 -201799647 + AluJb SINE Alu 1 303 -9 2362 85 0 0 chr5 1286903 1287197 -201798335 - AluSc SINE Alu -15 294 1 762 180 36 6 chr5 1287548 1287715 -201797817 - L1MD1 LINE L1 0 6242 6071 2531 200 32 5 chr5 1287735 1288318 -201797214 - L1MC1 LINE L1 -245 6391 5814 1265 243 32 41 chr5 1291312 1291815 -201793717 - L1MC1 LINE L1 -743 5797 5360 891 304 125 7 chr5 1291812 1292253 -201793279 - L1MC1 LINE L1 -1942 4598 4106 * 2009 220 123 40 chr5 1293005 1293953 -201791579 - L1MC1 LINE L1 -5180 1360 16 214 254 167 53 chr5 1293956 1294070 -201791462 - MIR3 SINE MIR -79 129 3 182 247 67 79 chr5 1297603 1297692 -201787840 - MIR SINE MIR -56 206 119 * 225 303 15 0 chr5 1297688 1297754 -201787778 - MIR SINE MIR -49 213 147 850 273 84 10 chr5 1297761 1298232 -201787300 - MER68 LTR ERV1 -5 557 12 261 258 34 45 chr5 1298252 1298341 -201787191 - MIR SINE MIR -146 116 29 2131 104 13 16 chr5 1298821 1299130 -201786402 - AluSx SINE Alu -4 308 1 2020 118 10 0 chr5 1299489 1299778 -201785754 - AluSx SINE Alu -20 292 1 3280 208 36 66 chr5 1304300 1305285 -201780247 + LTR5 LTR ERVK 1 956 -13 498 225 11 18 chr5 1307545 1307708 -201777824 + MER58 DNA MER1_type 40 232 -109 268 263 12 0 chr5 1310346 1310426 -201775106 + MLT1H LTR MaLR 463 543 -6 431 216 6 0 chr5 1312613 1312780 -201772752 + GA-rich Low_complexity Low_complexity 1 168 0 240 179 0 36 chr5 1312785 1312841 -201772691 + (CAGAGA)n Simple_repeat Simple_repeat 4 57 0 331 261 11 0 chr5 1317768 1317860 -201767672 - L1MA10 LINE L1 -9 6325 6233 598 251 166 19 chr5 1317968 1318275 -201767257 - L1MEc LINE L1 -4182 2214 1863 724 182 0 54 chr5 1318276 1318424 -201767108 - AluJo SINE Alu -172 140 1 340 58 0 19 chr5 1318442 1318494 -201767038 - MER75 DNA T2_type 0 504 454 781 296 70 0 chr5 1318566 1318880 -201766652 - L1MEc LINE L1 -4653 1743 1408 1077 191 70 8 chr5 1318903 1319121 -201766411 + MLT2B3 LTR ERVL 282 520 -34 702 93 0 0 chr5 1319121 1319229 -201766303 + (TCTA)n Simple_repeat Simple_repeat 2 109 0 1077 191 70 8 chr5 1319229 1319267 -201766265 + MLT2B3 LTR ERVL 520 554 0 1396 288 73 67 chr5 1319268 1319431 -201766101 - L1MEc LINE L1 -5249 1147 986 2152 64 8 0 chr5 1319431 1319697 -201765835 - AluY SINE Alu -22 289 22 1396 288 73 67 chr5 1319697 1320646 -201764886 - L1MEc LINE L1 -5410 986 29 553 279 107 32 chr5 1321868 1322232 -201763300 + HAL1 LINE L1 1720 2140 -367 471 332 158 46 chr5 1322873 1323477 -201762055 + L1ME LINE L1 607 1148 -4965 587 252 64 36 chr5 1323852 1324102 -201761430 + L1ME LINE L1 2196 2452 -3944 1051 215 119 10 chr5 1324109 1324420 -201761112 - MER2 DNA MER2_type 0 345 1 649 290 60 17 chr5 1324420 1324772 -201760760 + L1ME LINE L1 2423 2789 -3426 552 253 179 16 chr5 1324811 1325119 -201760413 + MER50 LTR ERV1 10 367 -367 1592 196 76 10 chr5 1325288 1325685 -201759847 + MER50 LTR ERV1 312 734 0 1054 268 55 29 chr5 1325694 1326149 -201759383 + L1ME LINE L1 2852 3318 -2897 1497 210 146 7 chr5 1326369 1326779 -201758753 + LTR24 LTR ERV1 1 467 0 884 263 46 52 chr5 1328254 1328638 -201756894 + LTR24 LTR ERV1 186 467 0 446 238 0 48 chr5 1328639 1328786 -201756746 + (CCCCAG)n Simple_repeat Simple_repeat 2 141 0 332 181 0 58 chr5 1328816 1328971 -201756561 + (CCCCAG)n Simple_repeat Simple_repeat 3 148 0 502 231 9 0 chr5 1331324 1331432 -201754100 + LTR55 LTR ERV 119 227 -321 2182 114 3 0 chr5 1332519 1332818 -201752714 + AluSg SINE Alu 1 300 -10 2165 105 0 25 chr5 1333945 1334259 -201751273 + AluSc SINE Alu 1 306 -3 21 0 0 0 chr5 1335198 1335219 -201750313 + AT_rich Low_complexity Low_complexity 1 21 0 697 171 13 7 chr5 1336404 1336562 -201748970 + MER1B DNA MER1_type 1 129 -168 1344 126 34 25 chr5 1338253 1338511 -201747021 + MER1B DNA MER1_type 119 339 0 444 324 53 18 chr5 1343091 1343261 -201742271 + HAL1 LINE L1 1032 1207 -1300 343 263 33 70 chr5 1343695 1343908 -201741624 + HAL1 LINE L1 1618 1822 -685 332 257 0 46 chr5 1344454 1344629 -201740903 + C-rich Low_complexity Low_complexity 2 168 0 216 310 46 35 chr5 1347074 1347161 -201738371 + MIR SINE MIR 171 258 -4 748 142 0 0 chr5 1347745 1347858 -201737674 + AluJb SINE Alu 1 113 -199 1218 157 44 0 chr5 1348646 1348850 -201736682 + AluJb SINE Alu 85 297 -15 558 132 0 0 chr5 1349089 1349165 -201736367 - FLAM_A SINE Alu -24 118 43 2026 110 0 14 chr5 1349732 1349901 -201735631 - AluY SINE Alu -11 300 135 2378 75 13 0 chr5 1349901 1350207 -201735325 - AluY SINE Alu 0 311 2 2026 110 0 14 chr5 1350207 1350329 -201735203 - AluY SINE Alu -176 135 13 1538 97 14 0 chr5 1350332 1350549 -201734983 + AluSg/x SINE Alu 90 309 -1 518 274 42 58 chr5 1350833 1351035 -201734497 - L2 LINE L2 0 3313 3114 1886 160 3 13 chr5 1351035 1351347 -201734185 + AluJb SINE Alu 1 309 -3 518 274 42 58 chr5 1351347 1351385 -201734147 - L2 LINE L2 -199 3114 3077 207 0 0 0 chr5 1352391 1352414 -201733118 + (A)n Simple_repeat Simple_repeat 1 23 0 280 128 0 0 chr5 1352435 1352482 -201733050 - MADE1 DNA Mariner -33 47 1 257 381 32 23 chr5 1352577 1352795 -201732737 - L2 LINE L2 -199 3073 2854 334 273 75 7 chr5 1352809 1353010 -201732522 - L2 LINE L2 -339 2974 2748 281 339 35 12 chr5 1359893 1360064 -201725468 + MLT1K LTR MaLR 413 587 -1 311 65 22 0 chr5 1360854 1360900 -201724632 + (TA)n Simple_repeat Simple_repeat 2 48 0 189 0 0 0 chr5 1361176 1361197 -201724335 + (GAAA)n Simple_repeat Simple_repeat 2 22 0 250 268 78 42 chr5 1364306 1364448 -201721084 - L1ME LINE L1 -347 5823 5677 277 243 9 37 chr5 1364706 1364813 -201720719 - L1ME LINE L1 -763 5399 5296 2207 122 0 0 chr5 1364819 1365131 -201720401 - AluSx SINE Alu 0 312 1 332 324 65 6 chr5 1365240 1365410 -201720122 - L2 LINE L2 -433 2881 2702 1238 310 47 19 chr5 1366610 1367596 -201717936 + L1ME1 LINE L1 4976 5994 -172 2885 171 36 2 chr5 1368309 1368787 -201716745 - LOR1a LTR ERV1 0 497 4 365 342 81 52 chr5 1368973 1369318 -201716214 + L1ME3A LINE L1 5682 6036 -134 697 253 45 5 chr5 1370056 1370254 -201715278 - L1MA10 LINE L1 -10 6324 6119 201 381 0 0 chr5 1371581 1371741 -201713791 + C-rich Low_complexity Low_complexity 1 160 0 2316 84 0 0 chr5 1372126 1372423 -201713109 - AluY SINE Alu -14 297 1 23 0 0 0 chr5 1372425 1372448 -201713084 + AT_rich Low_complexity Low_complexity 1 23 0 463 252 94 30 chr5 1372634 1372984 -201712548 + MER77 LTR ERV1 1 451 -154 342 0 0 0 chr5 1374645 1374683 -201710849 + (TG)n Simple_repeat Simple_repeat 1 38 0 195 42 0 0 chr5 1374766 1374790 -201710742 + (TG)n Simple_repeat Simple_repeat 1 24 0 213 39 0 0 chr5 1375066 1375092 -201710440 + (TG)n Simple_repeat Simple_repeat 1 26 0 225 290 0 0 chr5 1376232 1376301 -201709231 - MER20B DNA MER1_type -234 549 481 638 267 117 114 chr5 1376878 1377376 -201708156 - L1MEd LINE L1 -4960 1159 661 732 203 0 8 chr5 1377430 1377563 -201707969 - FLAM_A SINE Alu 0 133 2 1979 131 30 7 chr5 1384256 1384561 -201700971 - AluSx SINE Alu 0 312 1 1181 136 0 0 chr5 1385240 1385416 -201700116 + AluSg/x SINE Alu 137 312 0 862 198 19 6 chr5 1386041 1386198 -201699334 - AluJb SINE Alu -14 298 140 866 216 6 22 chr5 1386253 1386434 -201699098 - AluJb SINE Alu -13 299 122 225 337 0 0 chr5 1390575 1390661 -201694871 + C-rich Low_complexity Low_complexity 1 86 0 1850 126 3 11 chr5 1392348 1392633 -201692899 + AluSx SINE Alu 6 288 -24 184 278 63 40 chr5 1392838 1392964 -201692568 - L2 LINE L2 -332 2981 2853 24 53 0 0 chr5 1394141 1394179 -201691353 + GC_rich Low_complexity Low_complexity 1 38 0 187 349 128 0 chr5 1394947 1395033 -201690499 - MIR SINE MIR -118 144 48 2006 134 0 34 chr5 1396274 1396679 -201688853 - AluSg SINE Alu 0 394 1 1639 101 0 13 chr5 1396830 1397058 -201688474 + AluSp SINE Alu 86 310 -3 2281 97 0 0 chr5 1398013 1398324 -201687208 - AluSq SINE Alu -2 311 1 3503 204 39 40 chr5 1398340 1399019 -201686513 - L1MB5 LINE L1 -9 6165 5487 2088 103 3 3 chr5 1399019 1399309 -201686223 + AluSx SINE Alu 1 290 -22 3503 204 39 40 chr5 1399309 1399471 -201686061 - L1MB5 LINE L1 -687 5487 5323 2887 196 16 2 chr5 1399471 1400018 -201685514 - L1PB4 LINE L1 0 6156 5602 2912 49 0 0 chr5 1400026 1400375 -201685157 - L1PA4 LINE L1 0 6155 5807 2077 114 19 33 chr5 1400375 1400498 -201685034 - L1PB4 LINE L1 -687 5616 5493 2048 102 58 0 chr5 1400498 1400793 -201684739 - AluSx SINE Alu 0 312 1 2077 114 19 33 chr5 1400793 1401138 -201684394 - L1PB4 LINE L1 -810 5493 5150 987 179 53 11 chr5 1401179 1401369 -201684163 + THE1C LTR MaLR 1 198 -177 1566 189 16 26 chr5 1401442 1401748 -201683784 - AluJo SINE Alu -9 303 1 8925 175 69 53 chr5 1401751 1402626 -201682906 - L1PB4 LINE L1 -1505 4641 3782 1773 154 14 0 chr5 1402626 1402906 -201682626 - AluSx SINE Alu -22 290 7 8925 175 69 53 chr5 1402906 1403112 -201682420 - L1PB4 LINE L1 -2364 3782 3581 2321 66 0 13 chr5 1403112 1403417 -201682115 - AluSc SINE Alu -8 301 1 8925 175 69 53 chr5 1403417 1403851 -201681681 - L1PB4 LINE L1 -2565 3581 3155 2304 139 3 15 chr5 1403851 1404190 -201681342 + MER1B DNA MER1_type 1 335 -2 8925 175 69 53 chr5 1404190 1404506 -201681026 - L1PB4 LINE L1 -2991 3155 2846 2357 89 0 0 chr5 1404506 1404808 -201680724 - AluSg SINE Alu -8 302 1 8925 175 69 53 chr5 1404808 1405326 -201680206 - L1PB4 LINE L1 -3300 2846 2251 798 154 0 0 chr5 1405332 1405449 -201680083 - FLAM_C SINE Alu -25 118 2 9387 235 53 52 chr5 1405454 1405558 -201679974 - L1M4c LINE L1 -3886 2964 2862 2141 123 0 0 chr5 1405558 1405858 -201679674 + AluSx SINE Alu 3 302 -10 9387 235 53 52 chr5 1405858 1408700 -201676832 - L1M4c LINE L1 -3988 2862 13 1632 186 14 132 chr5 1408706 1409265 -201676267 - L1M4 LINE L1 -810 5336 4844 1208 142 0 26 chr5 1409642 1409832 -201675700 - AluJb SINE Alu -33 279 95 27 0 0 0 chr5 1409835 1409862 -201675670 + AT_rich Low_complexity Low_complexity 1 27 0 385 309 51 6 chr5 1410118 1410293 -201675239 - LTR41 LTR ERVL -590 183 1 1113 286 94 6 chr5 1410326 1410802 -201674730 - L1MEc LINE L1 -4434 1962 1445 871 143 8 0 chr5 1410803 1410936 -201674596 + AluJb SINE Alu 1 134 -178 427 279 53 13 chr5 1410937 1411163 -201674369 - L1MEc LINE L1 -4942 1454 1220 2808 222 60 68 chr5 1411166 1411349 -201674183 - L1M4 LINE L1 -1734 4412 4229 1739 159 3 41 chr5 1411349 1411663 -201673869 - AluJo SINE Alu -10 302 1 2808 222 60 68 chr5 1411663 1412537 -201672995 - L1M4 LINE L1 -1917 4229 3350 1679 183 55 33 chr5 1412537 1412903 -201672629 - MLT1A2 LTR MaLR 0 374 1 225 0 0 0 chr5 1412907 1412932 -201672600 + (TA)n Simple_repeat Simple_repeat 1 25 0 2282 101 0 3 chr5 1412932 1413240 -201672292 - AluSq SINE Alu -6 307 1 2181 125 0 0 chr5 1413246 1413557 -201671975 - AluSx SINE Alu -1 311 1 2808 222 60 68 chr5 1413557 1413728 -201671804 - L1M4 LINE L1 -2803 3343 3179 213 121 0 0 chr5 1413728 1413761 -201671771 + (TCCCC)n Simple_repeat Simple_repeat 3 35 0 1073 140 38 11 chr5 1413761 1413947 -201671585 - AluSg/x SINE Alu -2 310 120 2471 223 101 13 chr5 1413947 1414801 -201670731 - L1M4 LINE L1 -2980 3166 2238 244 200 17 0 chr5 1416686 1416806 -201668726 + (TG)n Simple_repeat Simple_repeat 1 122 0 387 112 10 92 chr5 1416818 1417014 -201668518 + (TG)n Simple_repeat Simple_repeat 1 180 0 328 246 16 33 chr5 1417080 1417263 -201668269 + (TG)n Simple_repeat Simple_repeat 1 180 0 548 145 0 25 chr5 1417299 1417458 -201668074 + (TG)n Simple_repeat Simple_repeat 2 156 0 350 114 14 0 chr5 1417615 1417685 -201667847 + (TG)n Simple_repeat Simple_repeat 2 72 0 279 231 51 39 chr5 1417952 1418030 -201667502 - LTR40c LTR ERVL -274 191 113 822 268 49 4 chr5 1418778 1419024 -201666508 + LTR40b LTR ERVL 196 452 -10 243 263 100 0 chr5 1419037 1419117 -201666415 - L1ME LINE L1 -469 5652 5565 369 208 144 58 chr5 1419171 1419344 -201666188 - L1ME LINE L1 -2366 5442 5255 2786 235 75 35 chr5 1420424 1421361 -201664171 - L1ME1 LINE L1 -5 6161 5128 2446 58 0 10 chr5 1421361 1421671 -201663861 + AluY SINE Alu 1 307 -4 2786 235 75 35 chr5 1421671 1422364 -201663168 - L1ME1 LINE L1 -1038 5128 4464 3920 221 25 2 chr5 1422836 1423819 -201661713 + L1MB5 LINE L1 5170 6172 -2 818 258 48 98 chr5 1431634 1432034 -201653498 + MLT1B LTR MaLR 3 382 -8 3497 241 67 33 chr5 1432034 1432601 -201652931 + MLT1A2-int LTR MaLR 15 561 -1174 2051 99 32 0 chr5 1432601 1432885 -201652647 + AluSg1 SINE Alu 1 293 -16 3497 241 67 33 chr5 1432885 1433617 -201651915 + MLT1A2-int LTR MaLR 561 1735 0 1564 193 45 58 chr5 1433617 1433996 -201651536 + MLT1A2 LTR MaLR 1 374 0 396 337 22 71 chr5 1435719 1436120 -201649412 + L1MDa LINE L1 1846 2242 -4298 1162 308 92 10 chr5 1436187 1437263 -201648269 + L1MDa LINE L1 2436 3574 -2966 513 235 42 25 chr5 1437332 1437570 -201647962 + L1MDa LINE L1 3727 3968 -2572 2300 240 90 74 chr5 1437581 1438571 -201646961 + L1MC4a LINE L1 6540 7545 -263 267 267 27 0 chr5 1438658 1438733 -201646799 + L1MC4 LINE L1 7965 8041 -1 476 248 151 31 chr5 1442558 1442933 -201642599 - MLT2B2 LTR ERVL -2 513 57 22 35 0 0 chr5 1445463 1445492 -201640040 + GC_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 1445570 1445591 -201639941 + GC_rich Low_complexity Low_complexity 1 21 0 301 172 78 0 chr5 1450114 1450178 -201635354 - U3 snRNA snRNA -147 70 2 8275 225 61 62 chr5 1450608 1452431 -201633101 - L1ME1 LINE L1 -18 6082 4259 2622 204 40 42 chr5 1452431 1452984 -201632548 - MLT2B3 LTR ERVL -2 552 1 8275 225 61 62 chr5 1452984 1453187 -201632345 - L1ME1 LINE L1 -1841 4259 4057 2399 78 3 3 chr5 1453187 1453494 -201632038 - AluSg SINE Alu -3 307 1 8275 225 61 62 chr5 1453494 1455235 -201630297 - L1ME1 LINE L1 -2043 4057 2319 1709 161 13 32 chr5 1455235 1455545 -201629987 - AluJo SINE Alu -8 304 1 8275 225 61 62 chr5 1455545 1456112 -201629420 - L1ME1 LINE L1 -3781 2319 1753 2057 132 7 0 chr5 1456113 1456401 -201629131 - AluSq SINE Alu -23 290 1 317 299 0 36 chr5 1456793 1456960 -201628572 + (CTGGGG)n Simple_repeat Simple_repeat 2 162 0 1813 138 14 30 chr5 1457626 1457923 -201627609 - AluJb SINE Alu -20 292 1 238 221 23 29 chr5 1458722 1459307 -201626225 + G-rich Low_complexity Low_complexity 1 581 0 257 266 3 74 chr5 1462424 1462624 -201622908 + C-rich Low_complexity Low_complexity 1 185 0 3645 221 26 2 chr5 1463234 1464216 -201621316 + L1MB5 LINE L1 5170 6172 -2 716 258 48 98 chr5 1470940 1471340 -201614192 + MLT1B LTR MaLR 3 382 -8 2212 192 72 18 chr5 1471340 1471907 -201613625 + MLT1B-int LTR MaLR 15 612 -759 2342 63 0 10 chr5 1471920 1472219 -201613313 + AluY SINE Alu 12 307 -4 1669 232 59 33 chr5 1472237 1472901 -201612631 - L1M4 LINE L1 -991 5155 4475 1737 263 82 24 chr5 1473351 1473488 -201612044 - L1ME1 LINE L1 -4398 1682 1554 1719 93 4 0 chr5 1473488 1473714 -201611818 + AluSg SINE Alu 1 227 -83 1737 263 82 24 chr5 1473714 1473786 -201611746 - L1ME1 LINE L1 -4526 1554 1488 1762 196 6 6 chr5 1473786 1474098 -201611434 - AluJo SINE Alu 0 312 1 1737 263 82 24 chr5 1474098 1474907 -201610625 - L1ME1 LINE L1 -4592 1488 627 1663 223 94 28 chr5 1474907 1475377 -201610155 + MLT1D LTR MaLR 1 501 -4 1737 263 82 24 chr5 1475377 1475429 -201610103 - L1ME1 LINE L1 -5453 627 579 301 299 112 48 chr5 1475728 1476022 -201609510 - L1ME1 LINE L1 -5573 497 185 795 209 199 67 chr5 1476391 1476797 -201608735 - MLT1C LTR MaLR -2 465 6 256 319 92 18 chr5 1476944 1477107 -201608425 - MIR SINE MIR -32 230 56 391 341 17 23 chr5 1478456 1478662 -201606870 + GA-rich Low_complexity Low_complexity 1 204 0 559 345 33 86 chr5 1478670 1478737 -201606795 + HAL1 LINE L1 877 946 -1561 1283 201 34 0 chr5 1478737 1478976 -201606556 + L1MA2 LINE L1 6058 6304 0 559 345 33 86 chr5 1478976 1479267 -201606265 + HAL1 LINE L1 946 1216 -1291 317 302 0 0 chr5 1479355 1479451 -201606081 + HAL1 LINE L1 1397 1492 -1015 429 205 0 76 chr5 1479936 1480121 -201605411 + (CGGGG)n Simple_repeat Simple_repeat 2 172 0 204 177 55 37 chr5 1480122 1480286 -201605246 + (CAGGG)n Simple_repeat Simple_repeat 5 171 0 321 223 29 43 chr5 1480302 1480441 -201605091 + (CAGGG)n Simple_repeat Simple_repeat 5 141 0 334 371 14 68 chr5 1480444 1480724 -201604808 + HAL1 LINE L1 2211 2475 -32 2173 103 33 0 chr5 1481604 1481905 -201603627 - AluSx SINE Alu -1 311 1 305 299 13 25 chr5 1487570 1487710 -201597822 - MIR SINE MIR -59 149 44 331 266 62 0 chr5 1489823 1489936 -201595596 + L1M3 LINE L1 5700 5819 -364 958 243 43 0 chr5 1489941 1490359 -201595173 + L1M2 LINE L1 5115 5547 -744 277 160 0 0 chr5 1490366 1490416 -201595116 + L1MB3 LINE L1 5498 5547 -757 265 160 0 0 chr5 1490423 1490473 -201595059 + L1MB3 LINE L1 5498 5547 -757 265 160 0 0 chr5 1490480 1490530 -201595002 + L1MB3 LINE L1 5498 5547 -758 1700 223 23 56 chr5 1490537 1491057 -201594475 + L1MA8 LINE L1 5498 6000 -291 904 218 125 0 chr5 1491070 1491359 -201594173 + L1MB3 LINE L1 5817 6141 -42 2322 83 3 7 chr5 1491370 1491671 -201593861 + AluSx SINE Alu 1 300 -12 240 293 61 0 chr5 1493738 1493837 -201591695 + LTR37A LTR ERV1 302 406 -20 426 399 42 40 chr5 1494436 1494880 -201590652 + L1M4 LINE L1 3442 3888 -2258 546 349 91 22 chr5 1494937 1495535 -201589997 - L1M4 LINE L1 -1229 4917 4255 2111 95 10 14 chr5 1495535 1495852 -201589680 - AluSq SINE Alu 0 313 1 546 349 91 22 chr5 1495852 1496010 -201589522 - L1M4 LINE L1 -1891 4255 4109 683 313 0 0 chr5 1496019 1496214 -201589318 - MER58A DNA MER1_type -2 222 28 788 365 31 15 chr5 1496249 1496985 -201588547 - L1M4 LINE L1 -2043 4103 3356 * 2079 268 80 10 chr5 1496984 1498065 -201587467 - L1ME2 LINE L1 -141 6023 4865 1081 226 36 39 chr5 1498112 1498213 -201587319 - L1ME2 LINE L1 -1394 4752 4652 1871 140 13 48 chr5 1498213 1498527 -201587005 - AluJo SINE Alu -9 303 1 1081 226 36 39 chr5 1498527 1498784 -201586748 - L1ME2 LINE L1 -1494 4652 4395 * 1119 249 40 34 chr5 1498782 1499255 -201586277 - L1ME2 LINE L1 -2615 3531 3056 293 284 29 7 chr5 1499479 1499642 -201585890 + L1ME LINE L1 5265 5431 -739 655 316 165 34 chr5 1500157 1500720 -201584812 + L1 LINE L1 3307 3943 -2203 1689 113 0 0 chr5 1500725 1500954 -201584578 - AluSg/x SINE Alu -1 309 81 2316 85 0 0 chr5 1501998 1502304 -201583228 + AluSg SINE Alu 1 306 -4 480 353 39 62 chr5 1502501 1502807 -201582725 + L1MEd LINE L1 636 934 -5185 2182 101 7 7 chr5 1507456 1507753 -201577779 - AluSx SINE Alu -15 297 1 390 168 22 0 chr5 1509075 1509212 -201576320 + (CACG)n Simple_repeat Simple_repeat 4 143 0 27 29 0 0 chr5 1512916 1512950 -201572582 + AT_rich Low_complexity Low_complexity 1 34 0 207 0 0 0 chr5 1513601 1513624 -201571908 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1431 60 6 6 chr5 1513626 1513809 -201571723 - AluY SINE Alu -32 279 97 588 198 25 0 chr5 1514295 1514416 -201571116 - MER63 DNA MER1_type -312 750 1 996 151 3 8 chr5 1514498 1514854 -201570678 + (TGGA)n Simple_repeat Simple_repeat 1 355 0 1019 137 4 6 chr5 1514895 1515417 -201570115 + (TGGA)n Simple_repeat Simple_repeat 1 521 0 206 273 0 0 chr5 1515668 1515712 -201569820 - MIR3 SINE MIR -13 195 152 237 100 50 0 chr5 1515870 1515910 -201569622 - Charlie3 DNA MER1_type -65 2645 2604 3214 141 17 30 chr5 1516825 1517356 -201568176 - MER1A DNA MER1_type -3 524 1 896 144 0 14 chr5 1525420 1525559 -201559973 + AluJo SINE Alu 1 137 -175 2084 148 0 0 chr5 1527417 1527728 -201557804 - AluSx SINE Alu -1 311 1 243 287 83 46 chr5 1527920 1528028 -201557504 - L2 LINE L2 -1 3271 3160 396 285 51 43 chr5 1528436 1528671 -201556861 - L1M4 LINE L1 -813 5333 5097 437 373 54 19 chr5 1529179 1529495 -201556037 - L1MEd LINE L1 -5733 386 60 1804 136 0 52 chr5 1529533 1529841 -201555691 - AluSx SINE Alu -20 292 1 2407 57 3 13 chr5 1529851 1530165 -201555367 - AluY SINE Alu 0 311 1 399 113 0 0 chr5 1531544 1531615 -201553917 + (CGG)n Simple_repeat Simple_repeat 1 71 0 341 306 131 31 chr5 1532826 1533048 -201552484 + L1ME4a LINE L1 5795 6038 -83 239 264 80 24 chr5 1533180 1533305 -201552227 + L1ME4a LINE L1 5990 6121 0 2487 54 0 16 chr5 1533674 1533990 -201551542 - AluY SINE Alu 0 311 1 2244 109 3 3 chr5 1534910 1535222 -201550310 + AluSx SINE Alu 1 312 0 2798 203 45 3 chr5 1537614 1538265 -201547267 - L1MB3 LINE L1 -2 6417 5740 * 9787 178 63 35 chr5 1538244 1538299 -201547233 - L1MB3 LINE L1 -3180 3202 3150 2216 85 0 0 chr5 1538299 1538607 -201546925 + AluSq SINE Alu 1 308 0 9787 178 63 35 chr5 1538607 1541638 -201543894 - L1MB3 LINE L1 -3232 3150 25 325 338 54 22 chr5 1542646 1542868 -201542664 - MIR SINE MIR -29 233 5 180 0 0 0 chr5 1543204 1543224 -201542308 + (T)n Simple_repeat Simple_repeat 1 20 0 21 36 0 0 chr5 1543980 1544008 -201541524 + AT_rich Low_complexity Low_complexity 1 28 0 1640 71 0 5 chr5 1544028 1544239 -201541293 - AluY SINE Alu -101 210 1 920 227 14 0 chr5 1544436 1544643 -201540889 + MER2 DNA MER2_type 1 210 -135 21 0 0 0 chr5 1544644 1544665 -201540867 + AT_rich Low_complexity Low_complexity 1 21 0 265 221 59 0 chr5 1544768 1544836 -201540696 - L2 LINE L2 -18 3295 3224 655 165 0 0 chr5 1546746 1546843 -201538689 - AluSg/x SINE Alu -19 291 195 253 257 118 40 chr5 1548571 1548723 -201536809 - L1MC5 LINE L1 -817 7144 6981 21 0 0 0 chr5 1548945 1548966 -201536566 + AT_rich Low_complexity Low_complexity 1 21 0 277 220 90 33 chr5 1549089 1549118 -201536414 - AluJo/F(R)AM SINE Alu -79 223 262 2257 110 0 0 chr5 1549118 1549418 -201536114 + AluSg SINE Alu 1 300 -10 277 220 90 33 chr5 1549418 1549514 -201536018 - AluJo/F(R)AM SINE Alu -39 263 174 400 343 45 8 chr5 1550418 1550552 -201534980 + L1ME4a LINE L1 3698 3836 -2310 2069 108 7 0 chr5 1550605 1550893 -201534639 + AluSp SINE Alu 1 290 -23 421 327 59 96 chr5 1551061 1551729 -201533803 + L1ME4a LINE L1 5256 5882 -239 332 314 54 76 chr5 1557407 1557722 -201527810 + L1M2 LINE L1 1603 1910 -4939 2178 90 10 10 chr5 1558158 1558447 -201527085 + AluSx SINE Alu 1 289 -23 200 188 0 0 chr5 1559240 1559272 -201526260 + MIR SINE MIR 219 250 -12 213 209 0 23 chr5 1559627 1559670 -201525862 + (CACG)n Simple_repeat Simple_repeat 3 44 0 22 0 0 0 chr5 1562307 1562329 -201523203 + GC_rich Low_complexity Low_complexity 1 22 0 29 60 0 0 chr5 1562409 1562459 -201523073 + GC_rich Low_complexity Low_complexity 1 50 0 22 80 0 0 chr5 1562670 1562720 -201522812 + GC_rich Low_complexity Low_complexity 1 50 0 209 262 16 71 chr5 1563489 1563672 -201521860 + GA-rich Low_complexity Low_complexity 2 174 0 241 271 6 55 chr5 1563924 1564105 -201521427 + GA-rich Low_complexity Low_complexity 5 176 0 2063 109 3 0 chr5 1570159 1570442 -201515090 - AluSx SINE Alu -15 297 14 23 0 0 0 chr5 1573420 1573443 -201512089 + AT_rich Low_complexity Low_complexity 1 23 0 203 187 13 80 chr5 1575816 1575891 -201509641 + G-rich Low_complexity Low_complexity 1 70 0 328 137 37 100 chr5 1576468 1576658 -201508874 + (CACCG)n Simple_repeat Simple_repeat 2 179 0 373 132 49 81 chr5 1576723 1577101 -201508431 + (CACCG)n Simple_repeat Simple_repeat 1 365 0 238 268 0 0 chr5 1577114 1577170 -201508362 + MLT1B LTR MaLR 330 385 -5 2324 78 0 0 chr5 1577209 1577503 -201508029 - AluSx SINE Alu -18 294 1 21 0 0 0 chr5 1778789 1778810 -201306722 + AT_rich Low_complexity Low_complexity 1 21 0 205 330 29 10 chr5 1779101 1779204 -201306328 + (CATA)n Simple_repeat Simple_repeat 3 107 0 * 215 314 0 14 chr5 1779136 1779206 -201306326 + (CATATA)n Simple_repeat Simple_repeat 3 71 0 566 220 6 12 chr5 1781837 1782482 -201303050 + (CTCA)n Simple_repeat Simple_repeat 1 641 0 466 241 6 6 chr5 1782846 1783176 -201302356 + (CTCA)n Simple_repeat Simple_repeat 1 330 0 206 231 15 0 chr5 1783208 1783273 -201302259 + (CTCA)n Simple_repeat Simple_repeat 2 67 0 263 245 11 0 chr5 1783375 1783469 -201302063 + (TTCA)n Simple_repeat Simple_repeat 1 95 0 1990 156 38 26 chr5 1784062 1784297 -201301235 - MSTB LTR MaLR 0 426 182 2166 139 18 0 chr5 1784297 1784628 -201300904 - MER1B DNA MER1_type 0 337 1 1990 156 38 26 chr5 1784628 1784809 -201300723 - MSTB LTR MaLR -244 182 5 501 183 26 0 chr5 1784800 1784915 -201300617 - MSTB LTR MaLR -304 122 5 * 501 183 26 0 chr5 1784906 1785021 -201300511 - MSTB LTR MaLR -304 122 5 252 149 60 0 chr5 1785012 1785079 -201300453 - MSTB2 LTR MaLR -319 138 68 * 2116 115 3 6 chr5 1787883 1788196 -201297336 - AluSx SINE Alu 0 312 1 374 289 66 68 chr5 1789438 1789874 -201295658 - MLT1D LTR MaLR -3 464 1 567 283 60 92 chr5 1789887 1790255 -201295277 - MLT1D-int LTR MaLR -15 1356 1001 223 354 12 6 chr5 1791291 1791455 -201294077 + C-rich Low_complexity Low_complexity 3 167 0 * 272 193 0 86 chr5 1791351 1791548 -201293984 + CT-rich Low_complexity Low_complexity 1 180 0 * 410 145 0 88 chr5 1791409 1791774 -201293758 + (CCTCG)n Simple_repeat Simple_repeat 1 332 0 372 270 22 28 chr5 1792569 1792805 -201292727 + G-rich Low_complexity Low_complexity 1 234 0 444 180 81 12 chr5 1794801 1794962 -201290570 + (CCCCAG)n Simple_repeat Simple_repeat 6 177 0 765 208 0 0 chr5 1795411 1795589 -201289943 + (CTCA)n Simple_repeat Simple_repeat 1 178 0 210 315 0 14 chr5 1803069 1803142 -201282390 + G-rich Low_complexity Low_complexity 4 75 0 47 104 0 0 chr5 1805412 1805585 -201279947 + GC_rich Low_complexity Low_complexity 1 173 0 1643 98 102 70 chr5 1807269 1807554 -201277978 - AluSx SINE Alu -15 297 4 240 366 12 6 chr5 1813461 1813633 -201271899 + (TATG)n Simple_repeat Simple_repeat 1 173 0 * 309 336 0 0 chr5 1813558 1813671 -201271861 + (TG)n Simple_repeat Simple_repeat 1 113 0 183 42 0 0 chr5 1817356 1817380 -201268152 + (CACCC)n Simple_repeat Simple_repeat 4 27 0 1184 101 28 11 chr5 1818502 1818680 -201266852 + L1PA10 LINE L1 5978 6158 -10 2210 101 0 3 chr5 1818735 1819032 -201266500 + AluSg SINE Alu 1 296 -14 676 260 97 8 chr5 1819248 1819506 -201266026 + L1ME3A LINE L1 5584 5864 -306 831 227 122 18 chr5 1819776 1820111 -201265421 + MLT1B LTR MaLR 21 390 0 429 180 79 29 chr5 1820138 1820277 -201265255 + L1ME3A LINE L1 6020 6165 -5 229 319 36 0 chr5 1820349 1820487 -201265045 + L1MC4 LINE L1 6963 7105 -937 424 337 137 4 chr5 1820489 1820738 -201264794 + L1M4 LINE L1 2802 3083 -3063 2026 119 7 0 chr5 1821213 1821507 -201264025 - AluSx SINE Alu -16 296 1 1676 154 222 3 chr5 1823458 1823809 -201261723 + MSTA LTR MaLR 1 428 0 8648 130 18 52 chr5 1823811 1824231 -201261301 + MSTA-int LTR MaLR 3 436 -1144 1899 145 9 28 chr5 1824231 1824549 -201260983 - AluSx SINE Alu 0 312 1 8648 130 18 52 chr5 1824549 1825756 -201259776 + MSTA-int LTR MaLR 436 1575 -5 1751 148 195 11 chr5 1825764 1826123 -201259409 + MSTA LTR MaLR 4 428 0 480 235 53 8 chr5 1827723 1827855 -201257677 + MER34 LTR ERV1 120 257 -285 1389 189 261 3 chr5 1827915 1828291 -201257241 - MER101 LTR ERV1 -1 473 1 344 336 35 0 chr5 1828295 1828438 -201257094 + MER34 LTR ERV1 356 503 -39 1236 152 140 16 chr5 1828886 1829143 -201256389 - MSTA LTR MaLR -139 289 1 9221 134 9 40 chr5 1829143 1830771 -201254761 - MSTA-int LTR MaLR 0 1580 3 1816 126 161 34 chr5 1830773 1830819 -201254713 - MSTA LTR MaLR 0 428 389 2328 81 0 3 chr5 1830819 1831123 -201254409 - AluSq SINE Alu 0 303 1 1816 126 161 34 chr5 1831123 1831455 -201254077 - MSTA LTR MaLR -39 389 1 1721 159 26 16 chr5 1834612 1834920 -201250612 + AluJo SINE Alu 1 311 -1 292 281 56 0 chr5 1837481 1837570 -201247962 - MER58B DNA MER1_type -6 335 242 1150 240 68 29 chr5 1837659 1838205 -201247327 + L1MEc LINE L1 871 1437 -5170 524 205 150 0 chr5 1838207 1838334 -201247198 + MER3 DNA MER1_type 64 209 0 255 240 0 0 chr5 1838294 1838344 -201247188 - MER3 DNA MER1_type -122 87 38 * 380 282 89 8 chr5 1838350 1838474 -201247058 + L1MEc LINE L1 2238 2371 -4055 1284 266 112 24 chr5 1838484 1839426 -201246106 + L1MEc LINE L1 2452 3494 -2932 344 284 40 57 chr5 1839480 1839656 -201245876 + L1MEc LINE L1 4383 4555 -1871 205 178 0 0 chr5 1840542 1840587 -201244945 + A-rich Low_complexity Low_complexity 1 45 0 2101 101 39 3 chr5 1840590 1840876 -201244656 - AluSg SINE Alu -14 296 1 194 0 39 0 chr5 1841235 1841261 -201244271 + (TG)n Simple_repeat Simple_repeat 2 28 0 606 265 52 13 chr5 1841924 1842154 -201243378 - Charlie5 DNA MER1_type -35 2577 2339 613 306 8 35 chr5 1843425 1843680 -201241852 + L1MEd LINE L1 30 277 -5768 2809 248 83 15 chr5 1843740 1845133 -201240399 + L1MEd LINE L1 223 1689 -4854 1985 243 23 2 chr5 1845133 1845606 -201239926 + L1MC3 LINE L1 7302 7784 -1 22 0 0 0 chr5 1845612 1845634 -201239898 + AT_rich Low_complexity Low_complexity 1 22 0 250 329 0 0 chr5 1845903 1845982 -201239550 + MIR3 SINE MIR 110 188 -20 321 248 127 6 chr5 1847191 1847348 -201238184 + LTR52 LTR ERVL 167 342 -79 230 359 23 8 chr5 1847586 1847714 -201237818 + MIR3 SINE MIR 71 200 -8 533 271 39 0 chr5 1849927 1850082 -201235450 + MER69 DNA AcHobo 72 232 -994 283 261 49 28 chr5 1851621 1851763 -201233769 + L1MEd LINE L1 438 582 -5972 877 307 94 76 chr5 1851833 1852746 -201232786 + L1MEd LINE L1 715 1644 -4910 364 285 71 57 chr5 1852744 1852892 -201232640 + L1MEd LINE L1 1566 1710 -1215 * 2624 37 3 0 chr5 1852892 1853188 -201232344 - AluY SINE Alu -14 297 1 364 285 71 57 chr5 1853188 1853423 -201232109 + L1MEd LINE L1 1710 2039 -886 2968 104 21 0 chr5 1853461 1854184 -201231348 + L1P4 LINE L1 4917 5652 -516 493 290 163 23 chr5 1854284 1854591 -201230941 + L1MEd LINE L1 3330 3679 -2885 305 296 45 62 chr5 1854611 1854787 -201230745 + L1MEd LINE L1 4521 4693 -1871 3277 57 16 11 chr5 1855541 1855983 -201229549 + MLT2A1 LTR ERVL 1 444 0 23 0 0 0 chr5 1856673 1856696 -201228836 + AT_rich Low_complexity Low_complexity 1 23 0 201 74 0 0 chr5 1859812 1859839 -201225693 + (CA)n Simple_repeat Simple_repeat 1 27 0 2145 129 7 3 chr5 1860906 1861208 -201224324 + AluSx SINE Alu 3 305 -7 2587 53 0 0 chr5 1862969 1863270 -201222262 - AluY SINE Alu -10 301 1 223 347 0 49 chr5 1863347 1863491 -201222041 + L2 LINE L2 3125 3261 -52 3557 103 2 6 chr5 1864511 1865024 -201220508 + MER9 LTR ERVK 1 511 0 2523 69 0 13 chr5 1865578 1865883 -201219649 - AluY SINE Alu -10 301 1 1351 165 116 15 chr5 1868354 1868621 -201216911 - AluJb SINE Alu -12 300 7 1642 316 88 28 chr5 1868789 1870023 -201215509 + L1MEc LINE L1 32 1340 -5056 364 245 109 27 chr5 1870074 1870221 -201215311 + L1MEc LINE L1 2723 2881 -3334 8162 38 13 0 chr5 1870980 1871974 -201213558 + LTR13 LTR ERVK 1 1007 0 192 40 0 0 chr5 1872352 1872377 -201213155 + (CAAAA)n Simple_repeat Simple_repeat 4 28 0 547 147 69 17 chr5 1872478 1872594 -201212938 + Tigger7 DNA MER2_type 2345 2466 -21 2385 78 6 34 chr5 1872637 1872958 -201212574 + AluSx SINE Alu 1 312 0 1503 204 10 19 chr5 1877026 1877340 -201208192 - AluJo SINE Alu -1 311 1 225 288 38 23 chr5 1877411 1877543 -201207989 - L1M1 LINE L1 -476 5828 5695 249 299 26 0 chr5 1878051 1878128 -201207404 + L2 LINE L2 3235 3313 0 564 343 64 20 chr5 1878673 1878924 -201206608 + MIR SINE MIR 1 262 0 25 31 0 0 chr5 1880682 1880714 -201204818 + GC_rich Low_complexity Low_complexity 1 32 0 200 35 35 0 chr5 1881655 1881684 -201203848 + (GAA)n Simple_repeat Simple_repeat 2 31 0 451 216 105 26 chr5 1882436 1882589 -201202943 + MER58C DNA MER1_type 48 212 -3 893 157 43 16 chr5 1883157 1883342 -201202190 - AluJo SINE Alu -8 304 115 418 322 65 0 chr5 1889943 1890142 -201195390 - Charlie5 DNA MER1_type -35 2577 2366 360 228 22 11 chr5 1891180 1891272 -201194260 - L1MC4a LINE L1 -1038 6770 6678 380 217 46 53 chr5 1894345 1894497 -201191035 + MER20 DNA MER1_type 6 156 -63 1086 186 85 80 chr5 1895312 1895689 -201189843 - MLT1B LTR MaLR -11 379 1 391 309 42 13 chr5 1897450 1897686 -201187846 - L1MEc LINE L1 -4590 1973 1731 2275 81 3 3 chr5 1897725 1898022 -201187510 + AluY SINE Alu 1 297 -14 502 307 49 0 chr5 1898072 1898235 -201187297 + MER58C DNA MER1_type 27 197 -18 288 281 102 15 chr5 1898251 1898454 -201187078 - L1MEc LINE L1 -4790 1592 1271 486 319 76 34 chr5 1898531 1898794 -201186738 - L1MEc LINE L1 -5250 1313 1040 426 283 104 0 chr5 1898859 1899110 -201186422 + MER33 DNA MER1_type 4 280 -44 820 170 78 0 chr5 1899111 1899264 -201186268 + AluJb SINE Alu 136 300 -12 3524 153 27 73 chr5 1899608 1900175 -201185357 - LTR39 LTR ERV1 0 783 262 1955 129 0 7 chr5 1900175 1900462 -201185070 - AluSx SINE Alu 0 312 28 3524 153 27 73 chr5 1900462 1900699 -201184833 - LTR39 LTR ERV1 -521 262 16 953 243 104 19 chr5 1903024 1903370 -201182162 + MER21B LTR ERV1 20 335 -528 4829 176 39 14 chr5 1903370 1904251 -201181281 - MER4D LTR ERV1 0 903 1 953 243 104 19 chr5 1904251 1904422 -201181110 + MER21B LTR ERV1 335 672 -191 761 247 148 3 chr5 1904541 1904824 -201180708 - MER68 LTR ERV1 -75 487 164 2003 150 145 18 chr5 1905038 1905418 -201180114 - MSTA LTR MaLR 0 428 1 7613 140 45 44 chr5 1905418 1906936 -201178596 - MSTA-int LTR MaLR 0 1580 61 403 359 122 17 chr5 1906944 1907181 -201178351 - L1MEc LINE L1 -5454 1109 848 21 36 0 0 chr5 1908924 1908952 -201176580 + AT_rich Low_complexity Low_complexity 1 28 0 517 199 140 23 chr5 1910568 1910739 -201174793 + MSTB2 LTR MaLR 229 444 -13 251 213 8 63 chr5 1912218 1912345 -201173187 + G-rich Low_complexity Low_complexity 3 122 0 * 325 291 28 22 chr5 1912286 1912465 -201173067 + (TG)n Simple_repeat Simple_repeat 1 180 0 711 264 58 55 chr5 1912515 1912863 -201172669 + MLT1A1 LTR MaLR 16 364 -1 229 134 79 8 chr5 1916277 1916404 -201169128 + (TG)n Simple_repeat Simple_repeat 1 136 0 241 120 48 60 chr5 1916442 1916609 -201168923 + (GTGTG)n Simple_repeat Simple_repeat 1 165 0 409 148 93 6 chr5 1916719 1916881 -201168651 + (TG)n Simple_repeat Simple_repeat 2 177 0 * 428 139 32 86 chr5 1916763 1917065 -201168467 + (GTGTG)n Simple_repeat Simple_repeat 1 285 0 1983 126 161 34 chr5 1917719 1918051 -201167481 + MSTA LTR MaLR 1 389 -39 2218 81 0 3 chr5 1918051 1918355 -201167177 + AluSq SINE Alu 1 303 0 1983 126 161 34 chr5 1918355 1918401 -201167131 + MSTA LTR MaLR 389 428 0 9896 133 9 41 chr5 1918403 1920033 -201165499 + MSTA-int LTR MaLR 3 1580 0 753 123 227 7 chr5 1920033 1920187 -201165345 + MSTA LTR MaLR 1 188 -240 196 141 47 12 chr5 1921743 1921828 -201163704 + (GGCTG)n Simple_repeat Simple_repeat 4 91 0 295 263 34 0 chr5 1921856 1921974 -201163558 + (GGCTG)n Simple_repeat Simple_repeat 1 122 0 309 300 80 33 chr5 1922181 1922331 -201163201 - L1MEc LINE L1 -5367 1029 873 469 283 104 0 chr5 1922396 1922647 -201162885 + MER33 DNA MER1_type 4 280 -44 862 170 78 0 chr5 1922648 1922801 -201162731 + AluJb SINE Alu 136 300 -12 2864 176 19 30 chr5 1923145 1923712 -201161820 - LTR39 LTR ERV1 0 783 223 2115 118 0 3 chr5 1923712 1924025 -201161507 - AluSx SINE Alu 0 312 1 693 194 0 0 chr5 1924765 1924925 -201160607 + (CA)n Simple_repeat Simple_repeat 1 160 0 304 212 153 0 chr5 1925536 1925621 -201159911 + L2 LINE L2 3172 3269 -3 2372 74 0 0 chr5 1925980 1926279 -201159253 - AluY SINE Alu -12 299 1 290 234 76 10 chr5 1926388 1926567 -201158965 - MSTC LTR MaLR -208 188 1 367 316 102 62 chr5 1926594 1927068 -201158464 - L1M4c LINE L1 -1202 1541 945 550 326 23 19 chr5 1927109 1927367 -201158165 - L1M4 LINE L1 -2010 4136 3878 183 243 0 0 chr5 1927466 1927503 -201158029 + MIR SINE MIR 108 144 -118 184 176 0 0 chr5 1930683 1930717 -201154815 + MIR SINE MIR 109 142 -120 505 223 196 42 chr5 1932607 1932966 -201152566 - MLT1F1 LTR MaLR -93 474 47 456 288 58 28 chr5 1933055 1933401 -201152131 - MLT1F1 LTR MaLR -166 376 27 185 319 67 8 chr5 1936809 1936928 -201148604 - MIR SINE MIR -29 233 108 1251 307 55 21 chr5 1937271 1937835 -201147697 - L1MD3 LINE L1 -8 7987 7405 1421 187 8 0 chr5 1937839 1938106 -201147426 - AluJb SINE Alu -4 308 40 1804 249 113 0 chr5 1938106 1938608 -201146924 - L1MD3 LINE L1 -736 7259 6701 24 0 0 0 chr5 1938638 1938662 -201146870 + AT_rich Low_complexity Low_complexity 1 24 0 412 362 83 24 chr5 1939018 1939441 -201146091 + L1MEd LINE L1 499 946 -5173 379 295 113 58 chr5 1939517 1939931 -201145601 + L1MEd LINE L1 960 1581 -909 394 255 13 27 chr5 1939931 1940080 -201145452 + L1MA10 LINE L1 6188 6334 0 336 345 20 34 chr5 1940094 1940242 -201145290 + L1MEc LINE L1 1034 1142 -5063 448 369 104 33 chr5 1940332 1940725 -201144807 + L1MEc LINE L1 1370 1790 -4606 1160 306 137 27 chr5 1941130 1941993 -201143539 + L1MEc LINE L1 2211 3220 -2995 2390 70 0 0 chr5 1941993 1942291 -201143241 + AluY SINE Alu 1 298 -13 1160 306 137 27 chr5 1942291 1942638 -201142894 + L1MEc LINE L1 3220 3527 -2688 * 4522 175 12 3 chr5 1942632 1943530 -201142002 + L1PA14 LINE L1 4474 5379 -767 2808 62 3 0 chr5 1943510 1943884 -201141648 + L1PA8 LINE L1 5797 6171 -1 * 5617 95 2 5 chr5 1943880 1944692 -201140840 + L1PA14 LINE L1 5352 6161 0 1525 284 123 26 chr5 1944730 1944783 -201140749 + L1MEc LINE L1 3506 3552 -2663 1965 125 0 7 chr5 1944783 1945086 -201140446 + AluSc SINE Alu 1 301 0 1525 284 123 26 chr5 1945086 1945876 -201139656 + L1MEc LINE L1 3552 4432 -1783 1796 212 73 9 chr5 1945894 1946001 -201139531 + L1M3 LINE L1 5363 5462 -721 252 0 0 0 chr5 1946001 1946029 -201139503 + (TAA)n Simple_repeat Simple_repeat 2 29 0 1796 212 73 9 chr5 1946029 1946345 -201139187 + L1M3 LINE L1 5462 5813 -370 267 286 0 0 chr5 1946347 1946410 -201139122 + L1ME LINE L1 5748 5810 -354 270 286 0 0 chr5 1946415 1946478 -201139054 + L1ME LINE L1 5748 5810 -354 227 333 0 0 chr5 1946483 1946546 -201138986 + L1ME LINE L1 5748 5810 -354 282 286 0 0 chr5 1946551 1946614 -201138918 + L1ME LINE L1 5748 5810 -354 263 302 0 0 chr5 1946619 1946682 -201138850 + L1ME LINE L1 5745 5807 -359 306 242 0 0 chr5 1946687 1946753 -201138779 + L1M3 LINE L1 5748 5813 -370 306 242 0 0 chr5 1946755 1946821 -201138711 + L1M2 LINE L1 5748 5813 -478 279 254 0 0 chr5 1946823 1946886 -201138646 + L1M4 LINE L1 5748 5810 -368 244 302 0 0 chr5 1946891 1946954 -201138578 + L1ME LINE L1 5748 5810 -354 295 258 0 0 chr5 1946959 1947025 -201138507 + L1M2 LINE L1 5748 5813 -478 281 286 0 0 chr5 1947027 1947090 -201138442 + L1ME LINE L1 5745 5807 -359 268 286 0 0 chr5 1947163 1947226 -201138306 + L1ME LINE L1 5748 5810 -354 268 286 0 0 chr5 1947231 1947294 -201138238 + L1ME LINE L1 5748 5810 -354 268 286 0 0 chr5 1947299 1947362 -201138170 + L1ME LINE L1 5748 5810 -354 285 270 0 0 chr5 1947367 1947430 -201138102 + L1ME LINE L1 5748 5810 -354 2199 189 33 2 chr5 1947435 1947858 -201137674 + L1MB3 LINE L1 5748 6183 0 2394 256 133 5 chr5 1949026 1949773 -201135759 - L1MA4 LINE L1 0 6300 5459 672 200 0 0 chr5 1950360 1950520 -201135012 + (CA)n Simple_repeat Simple_repeat 1 160 0 302 212 153 0 chr5 1951131 1951216 -201134316 + L2 LINE L2 3172 3269 -3 842 55 47 12 chr5 1954945 1955289 -201130243 + (TG)n Simple_repeat Simple_repeat 1 356 0 327 276 108 67 chr5 1955375 1955720 -201129812 - L1ME LINE L1 -5175 1241 975 716 301 120 33 chr5 1956038 1956767 -201128765 + L1ME3A LINE L1 1020 1770 -4445 441 311 80 51 chr5 1956803 1957262 -201128270 + L1ME3A LINE L1 1819 2361 -3854 3741 108 8 4 chr5 1957262 1957771 -201127761 - MER9 LTR ERVK 0 511 1 441 311 80 51 chr5 1957771 1957843 -201127689 + L1ME3A LINE L1 2361 2429 -3786 1784 42 0 0 chr5 1958000 1958214 -201127318 - LTR14B LTR ERVK -394 214 1 987 281 75 28 chr5 1958218 1958684 -201126848 + L1ME3A LINE L1 3347 3834 -2381 * 1666 194 8 8 chr5 1958667 1959044 -201126488 + L1ME3A LINE L1 4339 4715 -1500 759 127 22 0 chr5 1959042 1959176 -201126356 - L1 LINE L1 -1369 4777 4641 * 774 184 7 15 chr5 1959176 1959425 -201126107 + GA-rich Low_complexity Low_complexity 1 247 0 669 219 97 7 chr5 1959425 1959580 -201125952 - MER93b LTR ERV1 -203 170 2 1253 302 119 11 chr5 1959631 1960194 -201125338 + L1ME3A LINE L1 5328 5951 -284 25 31 0 0 chr5 1960378 1960410 -201125122 + AT_rich Low_complexity Low_complexity 1 32 0 2122 103 3 10 chr5 1960413 1960546 -201124986 + AluY SINE Alu 1 133 -178 2045 130 0 16 chr5 1960546 1960861 -201124671 + AluSg SINE Alu 1 310 0 2122 103 3 10 chr5 1960861 1961028 -201124504 + AluY SINE Alu 133 299 -12 718 252 34 17 chr5 1961975 1962213 -201123319 + L1M4 LINE L1 2360 2601 -3545 1179 54 0 0 chr5 1962218 1962365 -201123167 + AluY SINE Alu 158 304 -7 2199 77 0 13 chr5 1962439 1962737 -201122795 - AluY SINE Alu -17 294 1 26 0 0 0 chr5 1963676 1963702 -201121830 + AT_rich Low_complexity Low_complexity 1 26 0 2485 46 10 0 chr5 1964545 1964848 -201120684 + AluY SINE Alu 1 306 -5 285 191 38 30 chr5 1965419 1965550 -201119982 + GA-rich Low_complexity Low_complexity 5 136 0 639 171 26 0 chr5 1965662 1965779 -201119753 - MER45A DNA AcHobo 0 178 59 243 293 0 13 chr5 1965858 1965933 -201119599 + (TG)n Simple_repeat Simple_repeat 1 74 0 2012 136 0 7 chr5 1967313 1967622 -201117910 + AluSx SINE Alu 1 307 -5 607 356 99 55 chr5 1967649 1968162 -201117370 + L1ME4a LINE L1 5304 5846 -275 2526 227 94 21 chr5 1968162 1968835 -201116697 + MER72 LTR ERV1 1 722 0 607 356 99 55 chr5 1968835 1968899 -201116633 + L1ME4a LINE L1 5846 5906 -215 259 221 96 19 chr5 1968926 1969030 -201116502 + L1ME4a LINE L1 6009 6120 -1 187 114 45 0 chr5 1969588 1969632 -201115900 + GA-rich Low_complexity Low_complexity 3 48 0 338 303 9 9 chr5 1971232 1971341 -201114191 + Charlie7 DNA MER1_type 335 443 -2169 2031 98 7 11 chr5 1972521 1972833 -201112699 + AluSx SINE Alu 1 311 0 2101 87 6 81 chr5 1974021 1974356 -201111176 + AluSx SINE Alu 1 310 -2 336 24 0 0 chr5 1975630 1975671 -201109861 + (TG)n Simple_repeat Simple_repeat 1 41 0 23 0 0 0 chr5 1976319 1976342 -201109190 + GC_rich Low_complexity Low_complexity 1 23 0 21 82 0 0 chr5 1976377 1976426 -201109106 + GC_rich Low_complexity Low_complexity 1 49 0 238 161 16 65 chr5 1977968 1978030 -201107502 + L1MB8 LINE L1 6120 6178 0 24 32 0 0 chr5 1980158 1980189 -201105343 + GC_rich Low_complexity Low_complexity 1 31 0 22 106 0 0 chr5 1980253 1980338 -201105194 + GC_rich Low_complexity Low_complexity 1 85 0 21 36 0 0 chr5 1980391 1980419 -201105113 + GC_rich Low_complexity Low_complexity 1 28 0 24 32 0 0 chr5 1980443 1980474 -201105058 + GC_rich Low_complexity Low_complexity 1 31 0 192 40 0 0 chr5 1980517 1980542 -201104990 + (CGGG)n Simple_repeat Simple_repeat 2 26 0 27 29 0 0 chr5 1980650 1980684 -201104848 + GC_rich Low_complexity Low_complexity 1 34 0 513 244 0 0 chr5 1989385 1989545 -201095987 + (TG)n Simple_repeat Simple_repeat 1 160 0 323 333 68 93 chr5 1993889 1994303 -201091229 - HAL1 LINE L1 -1076 1431 1029 2210 110 0 0 chr5 1994303 1994612 -201090920 - AluSx SINE Alu -3 309 1 323 333 68 93 chr5 1994612 1994668 -201090864 - HAL1 LINE L1 -1478 1029 973 196 141 47 12 chr5 1997397 1997482 -201088050 + (GGCTG)n Simple_repeat Simple_repeat 4 91 0 295 263 34 0 chr5 1997510 1997628 -201087904 + (GGCTG)n Simple_repeat Simple_repeat 1 122 0 221 312 29 22 chr5 2001969 2002103 -201083429 + MIR SINE MIR 80 211 -51 212 218 18 77 chr5 2002326 2002496 -201083036 + (CCCTG)n Simple_repeat Simple_repeat 3 162 0 * 417 298 0 41 chr5 2002372 2002635 -201082897 + C-rich Low_complexity Low_complexity 1 252 0 252 274 107 20 chr5 2003327 2003524 -201082008 + MLT1D LTR MaLR 33 246 -259 414 271 80 69 chr5 2006045 2006307 -201079225 + L1ME LINE L1 674 938 -5181 186 385 33 16 chr5 2006911 2007033 -201078499 + L2 LINE L2 3148 3271 -1 235 214 0 0 chr5 2009142 2009198 -201076334 + (TG)n Simple_repeat Simple_repeat 1 56 0 1909 162 14 0 chr5 2009310 2009607 -201075925 - AluSx SINE Alu -11 301 1 2283 291 78 61 chr5 2009657 2011414 -201074118 + L1ME LINE L1 3397 5183 -946 762 200 113 0 chr5 2011416 2011611 -201073921 - Tigger1 DNA MER2_type 0 2418 2202 737 180 6 25 chr5 2011592 2011753 -201073779 - Tigger1 DNA MER2_type -2255 163 6 * 532 195 144 8 chr5 2011912 2012030 -201073502 + AluJo SINE Alu 1 134 -178 1092 207 23 80 chr5 2012043 2012430 -201073102 + L1ME LINE L1 5296 5660 -489 407 296 122 38 chr5 2013142 2013464 -201072068 - L1ME LINE L1 -536 5634 5272 2190 104 3 29 chr5 2013596 2013905 -201071627 - AluY SINE Alu -5 306 6 26 0 0 0 chr5 2013913 2013939 -201071593 + AT_rich Low_complexity Low_complexity 1 26 0 * 11956 212 29 18 chr5 2013928 2014783 -201070749 - L1PB1 LINE L1 0 6867 6023 207 0 0 0 chr5 2014783 2014806 -201070726 + (TTTG)n Simple_repeat Simple_repeat 1 23 0 1835 160 3 3 chr5 2014806 2015082 -201070450 - AluSx SINE Alu -32 280 5 11956 212 29 18 chr5 2015082 2017904 -201067628 - L1PB1 LINE L1 -844 6023 3086 6123 54 15 15 chr5 2017904 2018649 -201066883 + SVA Other Other 642 1386 0 11956 212 29 18 chr5 2018649 2020651 -201064881 - L1PB1 LINE L1 -3781 3086 1109 754 226 17 6 chr5 2020654 2020831 -201064701 - L1PB1 LINE L1 -6679 184 6 25 0 0 0 chr5 2021602 2021627 -201063905 + AT_rich Low_complexity Low_complexity 1 25 0 300 257 29 0 chr5 2021693 2021798 -201063734 + (TG)n Simple_repeat Simple_repeat 2 109 0 1464 228 3 10 chr5 2021913 2022211 -201063321 - AluJo SINE Alu -16 296 1 1307 256 57 44 chr5 2022916 2023580 -201061952 + L1ME LINE L1 4796 5479 -687 621 175 0 44 chr5 2023580 2023717 -201061815 + FLAM_C SINE Alu 3 133 0 1307 256 57 44 chr5 2023717 2023921 -201061611 + L1ME LINE L1 5479 5679 -487 2035 182 8 3 chr5 2023933 2024313 -201061219 - MLT1B LTR MaLR -8 382 1 708 209 41 0 chr5 2024688 2024860 -201060672 - L1PBa LINE L1 -6679 184 6 326 332 89 52 chr5 2025278 2025661 -201059871 - L1M4 LINE L1 -1128 5018 4622 257 275 22 0 chr5 2027299 2027390 -201058142 + (TG)n Simple_repeat Simple_repeat 2 94 0 1607 199 3 10 chr5 2027510 2027811 -201057721 - AluJo SINE Alu -13 299 1 281 263 46 72 chr5 2028533 2028685 -201056847 + L1ME LINE L1 4798 4945 -1201 195 400 9 0 chr5 2030152 2030262 -201055270 + L2 LINE L2 3145 3255 -17 188 402 51 8 chr5 2030373 2030490 -201055042 + L3b LINE CR1 1455 1576 -7 2272 85 0 69 chr5 2030722 2031040 -201054492 - AluSx SINE Alu -16 296 1 950 82 48 0 chr5 2033030 2033176 -201052356 - MER41A LTR ERV1 0 554 402 32 0 0 0 chr5 2035566 2035598 -201049934 + GC_rich Low_complexity Low_complexity 1 32 0 782 265 49 48 chr5 2038956 2039332 -201046200 - MLT1B LTR MaLR -12 378 1 208 277 45 28 chr5 2043115 2043292 -201042240 + (GGCTG)n Simple_repeat Simple_repeat 1 180 0 197 290 29 0 chr5 2047632 2047701 -201037831 + MIR SINE MIR 81 151 -57 26 0 0 0 chr5 2048413 2048439 -201037093 + GC_rich Low_complexity Low_complexity 1 26 0 277 229 0 13 chr5 2048693 2048772 -201036760 + L1ME LINE L1 5606 5681 -483 830 222 28 37 chr5 2048773 2048989 -201036543 + L1ME LINE L1 5466 5679 -487 1965 183 13 3 chr5 2049001 2049379 -201036153 - MLT1B LTR MaLR -8 382 1 248 234 0 0 chr5 2050442 2050506 -201035026 + (CA)n Simple_repeat Simple_repeat 1 64 0 1726 193 30 0 chr5 2050993 2051289 -201034243 - AluJb SINE Alu -7 305 1 401 343 78 50 chr5 2051382 2051703 -201033829 - L1MC4a LINE L1 -1892 5916 5587 329 296 111 29 chr5 2051750 2051993 -201033539 - L1MC4a LINE L1 -646 5520 5258 660 313 114 65 chr5 2051997 2052655 -201032877 - L1MC4a LINE L1 -897 5249 4560 333 299 103 58 chr5 2053217 2053441 -201032091 - L1ME4a LINE L1 -22 6597 6364 767 232 22 5 chr5 2054573 2054758 -201030774 - MLT1A2 LTR MaLR 0 374 187 543 256 56 32 chr5 2054758 2055008 -201030524 - MLT1A1 LTR MaLR -91 274 19 303 28 0 0 chr5 2055322 2055358 -201030174 + (TG)n Simple_repeat Simple_repeat 2 37 0 1978 88 11 4 chr5 2055378 2055641 -201029891 + AluY SINE Alu 33 297 -14 1147 135 12 0 chr5 2055641 2055811 -201029721 + AluSg/x SINE Alu 134 305 -7 186 308 48 19 chr5 2056571 2056675 -201028857 + MIR SINE MIR 75 181 -81 955 307 102 17 chr5 2057138 2058206 -201027326 - L1ME4a LINE L1 -285 6383 5222 2284 233 29 42 chr5 2058564 2058899 -201026633 - L1ME4a LINE L1 -3939 2707 2369 1572 194 32 7 chr5 2058899 2059183 -201026349 - AluJo SINE Alu -21 291 1 2284 233 29 42 chr5 2059183 2059911 -201025621 - L1ME4a LINE L1 -4277 2369 1570 644 178 0 0 chr5 2059925 2060026 -201025506 - Tigger7 DNA MER2_type -6 2481 2381 * 1264 195 22 0 chr5 2060024 2060255 -201025277 - Tigger7 DNA MER2_type -497 236 1 2116 246 53 26 chr5 2060255 2060991 -201024541 - L1ME4a LINE L1 -4971 1571 816 2153 96 0 69 chr5 2061286 2061620 -201023912 - AluY SINE Alu 0 311 1 235 211 60 0 chr5 2062969 2063042 -201022490 - MIR SINE MIR -73 135 76 2055 181 37 37 chr5 2064836 2065268 -201020264 - MSTB1 LTR MaLR 0 432 1 2206 248 25 28 chr5 2065833 2065854 -201019678 - L1M4c LINE L1 -4237 2409 2389 1282 226 28 14 chr5 2065854 2066141 -201019391 - AluJo SINE Alu -11 291 1 2206 248 25 28 chr5 2066141 2066867 -201018665 - L1M4c LINE L1 -4257 2389 1570 637 178 0 0 chr5 2066881 2066982 -201018550 - Tigger7 DNA MER2_type -6 2485 2385 * 1276 204 4 0 chr5 2066980 2067215 -201018317 - Tigger7 DNA MER2_type -497 236 1 2129 251 47 23 chr5 2067215 2067953 -201017579 - L1M4c LINE L1 -4971 1571 816 1183 152 0 0 chr5 2068251 2068442 -201017090 - AluY SINE Alu -2 309 119 297 0 0 0 chr5 2068442 2068475 -201017057 + (T)n Simple_repeat Simple_repeat 1 33 0 1090 69 0 0 chr5 2068478 2068609 -201016923 - AluY SINE Alu -180 131 1 245 188 47 31 chr5 2069970 2070034 -201015498 - MIR SINE MIR -67 141 77 2000 188 37 37 chr5 2071829 2072261 -201013271 - MSTB1 LTR MaLR 0 432 1 975 324 100 26 chr5 2072922 2074059 -201011473 + L1MEd LINE L1 90 1253 -4866 2091 92 0 3 chr5 2074092 2074376 -201011156 - AluY SINE Alu -28 283 1 2684 167 5 16 chr5 2075692 2076123 -201009409 - MSTB LTR MaLR 0 426 1 5001 175 29 32 chr5 2076123 2077099 -201008433 - MSTB-int LTR MaLR 0 1651 679 430 217 46 53 chr5 2078181 2078333 -201007199 + MER20 DNA MER1_type 6 156 -63 8087 119 101 103 chr5 2080343 2082043 -201003489 - pTR5 LTR ERV1 0 2438 742 262 302 129 18 chr5 2082252 2082477 -201003055 - L1MC5 LINE L1 -54 7907 7658 1148 264 39 35 chr5 2082741 2082843 -201002689 - L1M4 LINE L1 -2627 3519 3419 2055 123 0 19 chr5 2082843 2083159 -201002373 - AluSg SINE Alu 0 310 1 1148 264 39 35 chr5 2083159 2083575 -201001957 - L1M4 LINE L1 -2727 3419 2999 853 264 50 48 chr5 2085671 2086047 -200999485 - MLT1B LTR MaLR -12 378 1 207 284 45 23 chr5 2089830 2090006 -200995526 + (GGCTG)n Simple_repeat Simple_repeat 1 180 0 206 290 29 0 chr5 2094286 2094355 -200991177 + MIR SINE MIR 81 151 -57 279 264 0 66 chr5 2094656 2094777 -200990755 + C-rich Low_complexity Low_complexity 4 116 0 363 246 29 51 chr5 2094796 2094971 -200990561 + C-rich Low_complexity Low_complexity 5 175 0 338 274 102 15 chr5 2095654 2095851 -200989681 + MLT1D LTR MaLR 33 246 -259 357 298 78 67 chr5 2097997 2098252 -200987280 + L1ME LINE L1 674 931 -5188 182 385 33 16 chr5 2098864 2098986 -200986546 + L2 LINE L2 3148 3271 -1 235 214 0 0 chr5 2101185 2101241 -200984291 + (TG)n Simple_repeat Simple_repeat 1 56 0 1848 166 13 0 chr5 2101353 2101654 -200983878 - AluSx SINE Alu -7 305 1 2638 291 77 61 chr5 2101704 2103463 -200982069 + L1ME LINE L1 3397 5183 -946 827 203 102 0 chr5 2103465 2103662 -200981870 - Tigger1 DNA MER2_type 0 2418 2202 776 183 14 0 chr5 2103660 2103802 -200981730 - Tigger1 DNA MER2_type -2269 149 6 * 204 146 24 0 chr5 2103900 2103941 -200981591 + (CAAA)n Simple_repeat Simple_repeat 2 43 0 518 188 145 8 chr5 2103966 2104083 -200981449 + AluJo SINE Alu 2 134 -178 1197 229 27 53 chr5 2104096 2104471 -200981061 + L1ME LINE L1 5296 5660 -489 2003 100 7 32 chr5 2105633 2105942 -200979590 - AluY SINE Alu -5 306 6 11765 182 30 15 chr5 2105965 2106823 -200978709 - L1PB1 LINE L1 0 6867 6023 1705 163 4 3 chr5 2106823 2107126 -200978406 - AluSx SINE Alu -32 280 5 11765 182 30 15 chr5 2107126 2111922 -200973610 - L1PB1 LINE L1 -844 6023 1109 822 220 11 0 chr5 2111925 2112102 -200973430 - L1PB1 LINE L1 -6679 184 6 279 273 31 8 chr5 2112933 2113061 -200972471 + (TG)n Simple_repeat Simple_repeat 2 132 0 1308 214 0 84 chr5 2113176 2113499 -200972033 - AluJo SINE Alu -6 296 1 1317 262 56 43 chr5 2114204 2114866 -200970666 + L1ME LINE L1 4798 5479 -687 675 175 0 44 chr5 2114866 2115003 -200970529 + FLAM_C SINE Alu 3 133 0 1317 262 56 43 chr5 2115003 2115207 -200970325 + L1ME LINE L1 5479 5679 -487 2089 186 10 5 chr5 2115211 2115599 -200969933 - MLT1B LTR MaLR 0 390 1 234 250 0 0 chr5 2116664 2116728 -200968804 + (CA)n Simple_repeat Simple_repeat 1 64 0 1544 198 31 0 chr5 2117217 2117505 -200968027 - AluJb SINE Alu -15 297 1 233 330 28 50 chr5 2117616 2117834 -200967698 - L1MC/D LINE L1 -1911 5897 5685 344 296 111 29 chr5 2117966 2118209 -200967323 - L1MC/D LINE L1 -646 5520 5258 619 342 117 38 chr5 2118213 2118769 -200966763 - L1MC/D LINE L1 -897 5249 4650 2588 157 7 25 chr5 2120121 2120555 -200964977 - MSTB LTR MaLR 0 426 1 8003 180 20 10 chr5 2120555 2121979 -200963553 - MSTB-int LTR MaLR 0 1651 214 1611 148 120 68 chr5 2121979 2122405 -200963127 - LTR7 LTR ERV1 -2 448 1 2447 100 45 35 chr5 2122405 2123000 -200962532 - HERVH LTR ERV1 0 7713 5600 1283 176 60 0 chr5 2123001 2123234 -200962298 - HERVH LTR ERV1 -2564 5149 4903 5840 174 15 1 chr5 2123336 2124338 -200961194 - MSTA-int LTR MaLR -635 1016 1 310 200 15 0 chr5 2124338 2124403 -200961129 - MSTA LTR MaLR 0 428 363 278 279 97 45 chr5 2124501 2124748 -200960784 + L1MEc LINE L1 1442 1701 -4695 453 321 79 54 chr5 2124781 2125061 -200960471 + L1MEc LINE L1 2544 2830 -3385 1070 251 29 57 chr5 2125075 2125586 -200959946 - L1MEc LINE L1 -4897 1499 1003 513 239 65 0 chr5 2125646 2125801 -200959731 - L1MEc LINE L1 -5497 899 735 301 269 97 37 chr5 2125802 2125936 -200959596 + L1MEc LINE L1 1314 1455 -4941 4835 172 62 2 chr5 2125972 2127775 -200957757 - L1PB4 LINE L1 -7 6149 4245 1960 144 32 32 chr5 2127775 2128121 -200957411 + THE1B LTR MaLR 1 346 -18 3742 169 35 1 chr5 2128126 2128835 -200956697 - L1PB4 LINE L1 -1897 4249 3517 213 222 0 0 chr5 2129459 2129522 -200956010 + (CA)n Simple_repeat Simple_repeat 2 64 0 798 318 97 17 chr5 2130264 2131128 -200954404 - L1ME3A LINE L1 -219 6345 5426 506 275 148 41 chr5 2131486 2131670 -200953862 - MLT1C LTR MaLR -47 420 257 925 265 132 9 chr5 2131670 2131995 -200953537 - MLT1A1 LTR MaLR 0 365 1 506 275 148 41 chr5 2131995 2132148 -200953384 - MLT1C LTR MaLR -210 257 47 290 181 166 111 chr5 2136073 2136398 -200949134 + L1M3e LINE L1 1430 1772 -5258 392 238 8 0 chr5 2145669 2145795 -200939737 + (TGGA)n Simple_repeat Simple_repeat 4 130 0 373 260 6 6 chr5 2146742 2146919 -200938613 + (TG)n Simple_repeat Simple_repeat 1 177 0 289 264 0 0 chr5 2146934 2147055 -200938477 + (TG)n Simple_repeat Simple_repeat 1 121 0 383 292 136 30 chr5 2149275 2149511 -200936021 + L1M4 LINE L1 2 262 -6280 1423 263 114 8 chr5 2149584 2150112 -200935420 + L1M4 LINE L1 3754 4337 -2307 441 276 47 75 chr5 2150642 2150856 -200934676 + L1M4 LINE L1 5604 5811 -833 367 286 7 21 chr5 2150959 2151099 -200934433 - L1ME3A LINE L1 -1447 5093 4956 262 322 52 2 chr5 2151099 2151264 -200934268 + L1M4 LINE L1 1720 2329 -4316 336 216 45 23 chr5 2153135 2153223 -200932309 - MER91C DNA MER1_type -19 121 32 279 247 32 21 chr5 2154319 2154412 -200931120 + (TCCA)n Simple_repeat Simple_repeat 1 94 0 194 303 139 41 chr5 2154395 2154517 -200931015 - L2 LINE L2 0 3313 3180 * 246 250 147 26 chr5 2154644 2154760 -200930772 - L2 LINE L2 -277 3036 2907 208 301 108 0 chr5 2154902 2154995 -200930537 - L2 LINE L2 -738 2576 2474 294 190 51 0 chr5 2155383 2155462 -200930070 - LTR50 LTR ERVL -2 793 711 256 175 16 0 chr5 2155586 2155649 -200929883 - LTR50 LTR ERVL -277 518 455 316 292 10 36 chr5 2155776 2156084 -200929448 - L1MCa LINE L1 -4727 1699 1400 * 3811 115 52 7 chr5 2156062 2157190 -200928342 - L1PBa LINE L1 -4940 1923 595 236 219 14 55 chr5 2157622 2157695 -200927837 - L1MCa LINE L1 -5954 898 829 2172 118 7 0 chr5 2157779 2158084 -200927448 + AluSx SINE Alu 1 307 -5 722 294 106 6 chr5 2158645 2158975 -200926557 - MLT1C LTR MaLR 0 467 105 2646 260 87 42 chr5 2159076 2160716 -200924816 - L1ME3A LINE L1 -1842 4698 2945 1034 198 142 20 chr5 2160716 2161060 -200924472 + MLT1B LTR MaLR 1 386 -4 1043 293 70 15 chr5 2161064 2161825 -200923707 - L1MDa LINE L1 -3591 2949 2149 234 258 174 23 chr5 2163086 2163218 -200922314 - L2 LINE L2 -158 3114 2963 227 229 71 64 chr5 2164104 2164244 -200921288 + HAL1b LINE L1 1195 1335 -13 2359 84 0 0 chr5 2164285 2164583 -200920949 + AluY SINE Alu 1 298 -13 468 255 20 7 chr5 2164591 2164744 -200920788 + L1MEc LINE L1 37 191 -6205 778 205 80 0 chr5 2164788 2165012 -200920520 + L1MEc LINE L1 1895 2136 -4260 2008 125 17 0 chr5 2165714 2166001 -200919531 + AluSq SINE Alu 4 295 -18 4422 115 63 9 chr5 2166083 2166736 -200918796 - LTR12 LTR ERV1 0 688 1 603 195 13 6 chr5 2167649 2167808 -200917724 + (TGGA)n Simple_repeat Simple_repeat 3 162 0 254 250 0 0 chr5 2169246 2169298 -200916234 + LTR30 LTR ERV1 1 52 -670 1067 130 140 23 chr5 2169298 2169552 -200915980 + LTR12 LTR ERV1 55 2032 -406 280 227 0 0 chr5 2169553 2169628 -200915904 + LTR30 LTR ERV1 553 627 -95 742 112 26 0 chr5 2169628 2169744 -200915788 + LTR12 LTR ERV1 362 480 -234 387 335 94 12 chr5 2173994 2174164 -200911368 + L1MC4 LINE L1 6459 6642 -1400 862 261 109 7 chr5 2174171 2174474 -200911058 - MER2 DNA MER2_type -8 337 4 653 251 32 58 chr5 2174974 2175070 -200910462 + L1MEc LINE L1 2125 2222 -4174 2262 100 0 3 chr5 2175070 2175369 -200910163 - AluSx SINE Alu -14 298 1 653 251 32 58 chr5 2175369 2175614 -200909918 + L1MEc LINE L1 2222 2457 -3939 * 1309 223 45 16 chr5 2175611 2176038 -200909494 + L1ME1 LINE L1 5723 6161 -5 2033 140 3 9 chr5 2176224 2176539 -200908993 + AluSq SINE Alu 1 313 0 29 60 0 0 chr5 2179456 2179506 -200906026 + GC_rich Low_complexity Low_complexity 1 50 0 22 99 0 0 chr5 2179673 2179744 -200905788 + GC_rich Low_complexity Low_complexity 1 71 0 21 0 0 0 chr5 2179969 2179990 -200905542 + GC_rich Low_complexity Low_complexity 1 21 0 2199 68 72 0 chr5 2181215 2181507 -200904025 - AluSp SINE Alu 0 313 1 254 234 54 72 chr5 2185793 2185904 -200899628 + L2 LINE L2 3205 3313 0 1026 135 3 22 chr5 2185907 2186274 -200899258 + (TGGA)n Simple_repeat Simple_repeat 1 360 0 891 187 5 18 chr5 2186286 2186725 -200898807 + (TGGA)n Simple_repeat Simple_repeat 1 433 0 290 336 0 10 chr5 2186825 2186929 -200898603 + (TGGG)n Simple_repeat Simple_repeat 1 103 0 387 312 89 7 chr5 2186931 2187115 -200898417 + MIR SINE MIR 3 200 -62 929 222 0 0 chr5 2187408 2187584 -200897948 + AluJb SINE Alu 136 311 -1 450 214 21 7 chr5 2187598 2187738 -200897794 + GA-rich Low_complexity Low_complexity 1 142 0 562 161 193 6 chr5 2188820 2188981 -200896551 - L1MC2 LINE L1 0 6344 6154 186 276 60 75 chr5 2189630 2189764 -200895768 + L3 LINE CR1 517 648 -929 1123 250 118 53 chr5 2190806 2191314 -200894218 - MLT1F LTR MaLR 0 542 2 2785 100 11 0 chr5 2191345 2191716 -200893816 - THE1C LTR MaLR 0 375 1 272 361 53 34 chr5 2191727 2191945 -200893587 - MIR3 SINE MIR -10 252 30 28 0 0 0 chr5 2192603 2192631 -200892901 + GC_rich Low_complexity Low_complexity 1 28 0 202 213 38 50 chr5 2192689 2192769 -200892763 + (CCCCG)n Simple_repeat Simple_repeat 1 79 0 841 156 13 26 chr5 2192956 2193110 -200892422 + AluJo SINE Alu 30 181 -131 321 304 14 16 chr5 2193390 2193557 -200891975 + L1M4 LINE L1 4260 4424 -1722 1138 248 42 121 chr5 2193580 2194456 -200891076 - L1M4 LINE L1 -2585 3561 2755 230 279 243 29 chr5 2199116 2199252 -200886280 - MIR3 SINE MIR -26 182 18 197 211 19 0 chr5 2199886 2199938 -200885594 + (TAGA)n Simple_repeat Simple_repeat 3 55 0 2208 92 0 3 chr5 2200276 2200569 -200884963 + AluSc SINE Alu 1 292 -17 1906 154 0 22 chr5 2200578 2200897 -200884635 + AluJb SINE Alu 1 312 0 238 297 55 0 chr5 2202061 2202152 -200883380 + MER5A DNA MER1_type 14 109 -80 1983 96 17 7 chr5 2203878 2204171 -200881361 + AluY SINE Alu 1 296 -15 265 208 49 87 chr5 2205497 2205680 -200879852 + (CATCC)n Simple_repeat Simple_repeat 1 176 0 320 291 36 0 chr5 2209736 2209846 -200875686 + MIR SINE MIR 38 151 -111 180 111 0 0 chr5 2211032 2211059 -200874473 + (TG)n Simple_repeat Simple_repeat 2 28 0 210 37 0 0 chr5 2214282 2214309 -200871223 + (TTTTTG)n Simple_repeat Simple_repeat 3 29 0 347 250 56 12 chr5 2215732 2215912 -200869620 + L1MCa LINE L1 1690 1969 -4564 1604 88 22 9 chr5 2215971 2216198 -200869334 - MER30 DNA MER1_type 0 230 1 207 0 0 0 chr5 2216987 2217010 -200868522 + (CAA)n Simple_repeat Simple_repeat 2 24 0 241 202 147 9 chr5 2217551 2217660 -200867872 - L1MB8 LINE L1 -77 6101 5978 317 309 47 0 chr5 2218520 2218669 -200866863 + L1ME LINE L1 167 322 -5883 254 296 142 12 chr5 2219073 2219242 -200866290 + L1ME LINE L1 810 1000 -5396 541 231 54 51 chr5 2219411 2219671 -200865861 + MER4C LTR ERV1 275 683 -16 694 230 32 8 chr5 2219713 2219965 -200865567 + L1ME LINE L1 2788 3045 -3170 1739 133 158 142 chr5 2219965 2220689 -200864843 - LTR12 LTR ERV1 -133 2017 54 261 176 20 0 chr5 2220689 2220740 -200864792 - LTR30 LTR ERV1 -670 52 1 3492 257 79 19 chr5 2220741 2222284 -200863248 + L1ME LINE L1 3043 4677 -1538 279 304 0 10 chr5 2222464 2222566 -200862966 - MIR SINE MIR -72 136 36 4720 166 41 8 chr5 2224515 2225311 -200860221 - L1PA16 LINE L1 -9 6157 5298 2341 63 0 7 chr5 2225311 2225611 -200859921 - AluY SINE Alu -13 298 1 4720 166 41 8 chr5 2225611 2226124 -200859408 - L1PA16 LINE L1 -868 5298 4803 297 226 0 0 chr5 2227958 2228020 -200857512 - MLT1D LTR MaLR 0 505 444 245 195 57 98 chr5 2228137 2228260 -200857272 - MLT1D LTR MaLR -293 212 95 222 275 71 58 chr5 2229661 2229804 -200855728 - MIR SINE MIR -67 141 17 1068 178 32 9 chr5 2230372 2230591 -200854941 - MSTB LTR MaLR 0 426 203 1073 143 56 79 chr5 2230956 2231037 -200854495 - MSTB LTR MaLR -165 261 180 2251 99 0 10 chr5 2231037 2231339 -200854193 - AluSx SINE Alu -13 299 1 1073 143 56 79 chr5 2231339 2231523 -200854009 - MSTB LTR MaLR -246 180 2 384 271 6 41 chr5 2233188 2233358 -200852174 + (TG)n Simple_repeat Simple_repeat 1 164 0 298 224 40 0 chr5 2234138 2234214 -200851318 + G-rich Low_complexity Low_complexity 3 81 0 1736 229 53 28 chr5 2239317 2239846 -200845686 - MER6A DNA MER2_type -63 542 1 246 238 83 24 chr5 2239914 2239998 -200845534 + L1ME LINE L1 5340 5428 -807 237 274 27 0 chr5 2240142 2240215 -200845317 + L1ME LINE L1 5451 5525 -714 818 179 87 6 chr5 2242025 2242198 -200843334 - AluJo SINE Alu -10 302 116 247 316 155 0 chr5 2243938 2244093 -200841439 + MLT1E LTR MaLR 398 576 -17 1470 123 4 48 chr5 2245333 2245601 -200839931 - HERVH LTR ERV1 -2970 4743 4488 3028 116 6 2 chr5 2245603 2246095 -200839437 - HERVH LTR ERV1 -3720 3993 3500 715 182 20 0 chr5 2246094 2246242 -200839290 - HERVH LTR ERV1 -4423 3290 3140 * 14661 113 25 23 chr5 2246236 2249523 -200836009 - HERVH LTR ERV1 -4726 2987 1 1621 144 114 74 chr5 2249525 2249956 -200835576 - LTR7 LTR ERV1 -2 448 1 1161 157 19 0 chr5 2249956 2250172 -200835360 - MSTA-int LTR MaLR -1431 220 1 289 114 0 0 chr5 2250181 2250225 -200835307 - MSTA LTR MaLR -9 419 376 635 320 59 69 chr5 2250227 2250618 -200834914 + L1MDa LINE L1 1600 1986 -4554 834 152 26 26 chr5 2250762 2250993 -200834539 - HERVH LTR ERV1 -7481 232 2 1568 146 114 74 chr5 2250997 2251428 -200834104 - LTR7 LTR ERV1 -2 448 1 1161 157 19 0 chr5 2251428 2251644 -200833888 - MSTA-int LTR MaLR -1431 220 1 270 122 0 0 chr5 2251653 2251694 -200833838 - MSTA LTR MaLR -9 419 379 771 335 83 76 chr5 2251698 2252405 -200833127 + L1MDa LINE L1 1600 3166 -3374 984 236 31 64 chr5 2252409 2252922 -200832610 - L1MEc LINE L1 -4899 1497 1002 462 235 85 0 chr5 2252980 2253133 -200832399 - L1MEc LINE L1 -5496 900 735 4463 172 56 2 chr5 2253304 2255120 -200830412 - L1PB4 LINE L1 -7 6149 4246 1797 147 32 32 chr5 2255121 2255467 -200830065 + THE1B LTR MaLR 1 346 -18 3538 169 35 1 chr5 2255472 2256181 -200829351 - L1PB4 LINE L1 -1897 4249 3517 414 296 0 0 chr5 2256842 2257182 -200828350 + (CA)n Simple_repeat Simple_repeat 1 340 0 427 245 49 120 chr5 2258019 2258409 -200827123 + MLT1C LTR MaLR 15 383 -7 192 61 20 61 chr5 2260428 2260477 -200825055 + (CGGGG)n Simple_repeat Simple_repeat 3 49 0 25 31 0 0 chr5 2260585 2260617 -200824915 + GC_rich Low_complexity Low_complexity 1 32 0 708 309 102 16 chr5 2264879 2265534 -200819998 - L1ME LINE L1 -427 5737 5032 308 280 197 21 chr5 2265892 2266077 -200819455 - MLT1C LTR MaLR -47 420 269 1006 259 132 9 chr5 2266077 2266402 -200819130 - MLT1A1 LTR MaLR 0 365 1 308 280 197 21 chr5 2266402 2266571 -200818961 - MLT1C LTR MaLR -198 269 25 535 245 62 26 chr5 2267154 2267427 -200818105 + pTR5 LTR ERV1 1060 1342 -1096 3074 135 77 151 chr5 2267441 2268183 -200817349 + LTR12 LTR ERV1 2 688 0 316 325 129 35 chr5 2272563 2272849 -200812683 - HAL1 LINE L1 -720 1787 1475 190 366 138 0 chr5 2273064 2273187 -200812345 + L2 LINE L2 3098 3237 -76 305 278 0 22 chr5 2276077 2276348 -200809184 + (TG)n Simple_repeat Simple_repeat 1 265 0 232 260 23 79 chr5 2277579 2277756 -200807776 + (CACCG)n Simple_repeat Simple_repeat 3 169 0 371 338 134 13 chr5 2284177 2284491 -200801041 - L1ME LINE L1 -411 5755 5404 1631 266 90 26 chr5 2285146 2285864 -200799668 - L1ME LINE L1 -756 5390 4661 214 260 26 13 chr5 2287008 2287085 -200798447 + G-rich Low_complexity Low_complexity 4 81 0 225 0 0 0 chr5 2292742 2292767 -200792765 + (TA)n Simple_repeat Simple_repeat 1 25 0 279 283 81 0 chr5 2293426 2293574 -200791958 + L1MDa LINE L1 1841 2040 -4548 341 316 95 49 chr5 2293884 2294004 -200791528 + L1MDa LINE L1 1094 1207 -5323 2634 39 0 3 chr5 2294004 2294316 -200791216 + AluY SINE Alu 1 311 0 341 316 95 49 chr5 2294316 2294499 -200791033 + L1MDa LINE L1 1207 1411 -5119 281 294 9 0 chr5 2294918 2295027 -200790505 + L1MDa LINE L1 3755 3864 -2676 339 340 14 0 chr5 2295406 2295547 -200789985 + L1MDa LINE L1 3892 4034 -2506 475 313 37 0 chr5 2295649 2295783 -200789749 - MIR SINE MIR -12 250 112 1080 270 111 39 chr5 2295813 2296706 -200788826 + L1MDa LINE L1 4124 5080 -1460 721 301 78 19 chr5 2296807 2297279 -200788253 + L1MDa LINE L1 5295 5794 -746 378 306 39 63 chr5 2297545 2297599 -200787933 + L1M4c LINE L1 998 1052 -5332 2106 114 10 0 chr5 2297599 2297896 -200787636 - AluSx SINE Alu -12 300 1 378 306 39 63 chr5 2297896 2298256 -200787276 + L1M4c LINE L1 1052 1402 -4982 306 87 0 0 chr5 2298496 2298542 -200786990 + (CA)n Simple_repeat Simple_repeat 1 46 0 438 224 5 68 chr5 2298564 2298756 -200786776 + (CA)n Simple_repeat Simple_repeat 1 180 0 254 114 114 36 chr5 2298676 2298843 -200786689 + (CACAG)n Simple_repeat Simple_repeat 1 180 0 * 394 139 0 64 chr5 2298847 2299020 -200786512 + (CA)n Simple_repeat Simple_repeat 1 162 0 397 320 106 69 chr5 2299757 2300266 -200785266 - L1M4 LINE L1 -2786 3360 2833 1736 229 53 28 chr5 2305406 2305935 -200779597 - MER6A DNA MER2_type -63 542 1 246 238 83 24 chr5 2306003 2306087 -200779445 + L1ME LINE L1 5271 5359 -807 237 274 27 0 chr5 2306231 2306304 -200779228 + L1ME LINE L1 5382 5456 -708 818 179 87 6 chr5 2308118 2308291 -200777241 - AluJo SINE Alu -10 302 116 247 316 155 0 chr5 2310182 2310337 -200775195 + MLT1E LTR MaLR 398 576 -17 182 244 0 26 chr5 2313920 2313998 -200771534 + (CATA)n Simple_repeat Simple_repeat 3 78 0 2138 129 3 0 chr5 2314503 2314814 -200770718 - AluSx SINE Alu 0 312 1 397 279 41 0 chr5 2315225 2315372 -200770160 + MSTD LTR MaLR 1 153 -243 908 192 60 34 chr5 2315513 2315747 -200769785 + MSTD LTR MaLR 157 396 0 1269 123 5 0 chr5 2316271 2316458 -200769074 + AluSg/x SINE Alu 124 311 -1 475 254 58 5 chr5 2316466 2316655 -200768877 + L1M4 LINE L1 5132 5330 -816 343 288 136 30 chr5 2322163 2322399 -200763133 + L1M4 LINE L1 2 262 -6280 2407 276 83 17 chr5 2322468 2322997 -200762535 + L1M4 LINE L1 3754 4247 -2397 1627 168 24 30 chr5 2322997 2323295 -200762237 - AluJo SINE Alu -16 296 1 2407 276 83 17 chr5 2323295 2323752 -200761780 + L1M4 LINE L1 4247 4805 -1839 760 199 39 57 chr5 2323787 2324112 -200761420 + MLT1B LTR MaLR 21 337 -130 310 297 119 0 chr5 2324331 2324449 -200761083 + MER58B DNA MER1_type 210 341 0 2070 131 0 0 chr5 2327758 2328055 -200757477 + AluSx SINE Alu 1 297 -15 266 298 92 0 chr5 2328663 2328794 -200756738 - MIR SINE MIR -10 252 110 219 231 87 10 chr5 2329231 2329335 -200756197 - MIR SINE MIR -132 130 19 337 318 67 6 chr5 2329988 2330134 -200755398 - MIR SINE MIR -4 258 105 2146 175 107 5 chr5 2330935 2331375 -200754157 + MER31A LTR ERV1 1 485 0 1142 144 0 0 chr5 2331941 2332114 -200753418 - AluSg/x SINE Alu -6 304 132 677 87 77 29 chr5 2332332 2332436 -200753096 - AluSq/x SINE Alu -204 109 1 621 255 84 56 chr5 2332475 2332832 -200752700 + L1MDa LINE L1 20 386 -6154 196 77 51 0 chr5 2332869 2332908 -200752624 + (CA)n Simple_repeat Simple_repeat 1 41 0 333 0 0 0 chr5 2332999 2333036 -200752496 + (CA)n Simple_repeat Simple_repeat 1 37 0 1703 232 92 20 chr5 2333232 2334402 -200751130 + L1MDa LINE L1 1014 2098 -4442 2116 115 13 0 chr5 2334402 2334706 -200750826 + AluSq SINE Alu 3 310 -3 1703 232 92 20 chr5 2334706 2335172 -200750360 + L1MDa LINE L1 2098 3290 -3250 1094 74 0 4 chr5 2335172 2335387 -200750145 + AluY SINE Alu 1 302 -9 1143 223 67 5 chr5 2335389 2335779 -200749753 + L1MDa LINE L1 3282 3695 -2845 2027 191 57 17 chr5 2335784 2336164 -200749368 + LTR26 LTR ERV1 9 452 -151 2186 86 17 7 chr5 2336164 2336454 -200749078 + AluSx SINE Alu 1 293 -19 2027 191 57 17 chr5 2336454 2336613 -200748919 + LTR26 LTR ERV1 452 603 0 456 332 58 8 chr5 2336626 2337006 -200748526 + L1MDa LINE L1 3715 4113 -2427 207 273 23 30 chr5 2338870 2339002 -200746530 + (TG)n Simple_repeat Simple_repeat 1 131 0 754 167 8 8 chr5 2542637 2542763 -200542769 + MER49 LTR ERV1 10 135 -788 1516 194 77 119 chr5 2542763 2543344 -200542188 - LTR1B LTR ERV1 0 826 284 249 278 159 20 chr5 2546372 2546523 -200539009 - LTR16B LTR ERVL -4 460 289 603 229 13 0 chr5 2546531 2546769 -200538763 + GA-rich Low_complexity Low_complexity 1 241 0 250 318 122 0 chr5 2547525 2547632 -200537900 + L2 LINE L2 3153 3272 0 580 318 66 3 chr5 2548131 2548417 -200537115 + L1ME3A LINE L1 5548 5851 -319 331 295 0 0 chr5 2549699 2549794 -200535738 + (CA)n Simple_repeat Simple_repeat 2 96 0 411 261 0 0 chr5 2550990 2551401 -200534131 + (TG)n Simple_repeat Simple_repeat 1 411 0 237 237 136 0 chr5 2552175 2552234 -200533298 + L2 LINE L2 3204 3270 -2 196 188 31 0 chr5 2553666 2553730 -200531802 + (TG)n Simple_repeat Simple_repeat 1 66 0 1211 265 131 23 chr5 2554052 2554479 -200531053 + MLT1E LTR MaLR 121 593 0 2070 120 0 3 chr5 2554690 2554998 -200530534 + AluSq SINE Alu 1 307 -6 628 174 14 28 chr5 2555175 2555488 -200530044 + GA-rich Low_complexity Low_complexity 1 308 0 2715 171 37 70 chr5 2556457 2557325 -200528207 - L1MCa LINE L1 -3981 2445 1332 3209 64 5 0 chr5 2557350 2557758 -200527774 - L1PA7 LINE L1 -4 6150 5741 437 311 14 0 chr5 2557819 2557967 -200527565 + Charlie2 DNA MER1_type 2670 2819 -43 2095 90 28 3 chr5 2557973 2558262 -200527270 + AluSc SINE Alu 1 296 -13 2339 123 2 73 chr5 2558723 2559121 -200526411 - L1PA13 LINE L1 -289 5874 5505 1337 148 3 67 chr5 2559763 2560094 -200525438 - AluSx SINE Alu 0 312 3 345 251 11 11 chr5 2561083 2561262 -200524270 + (CA)n Simple_repeat Simple_repeat 1 179 0 340 366 6 0 chr5 2561335 2561551 -200523981 + (CA)n Simple_repeat Simple_repeat 1 217 0 2259 84 3 0 chr5 2561853 2562150 -200523382 + AluSp SINE Alu 1 298 -15 266 268 14 0 chr5 2562151 2562222 -200523310 - MER53 DNA DNA -117 72 1 1546 228 56 18 chr5 2562387 2562834 -200522698 - MLT1C LTR MaLR 0 467 4 2202 93 6 10 chr5 2563637 2563949 -200521583 + AluY SINE Alu 1 311 0 183 204 0 0 chr5 2565808 2565852 -200519680 + (TG)n Simple_repeat Simple_repeat 1 44 0 225 277 59 10 chr5 2565913 2566014 -200519518 + MER88 LTR ERVL 79 184 -280 * 257 337 24 12 chr5 2565925 2566094 -200519438 - MER74B LTR ERVL -74 548 378 236 254 17 0 chr5 2566108 2566167 -200519365 - MER74A LTR ERVL -293 265 206 394 203 0 0 chr5 2566395 2566469 -200519063 + AluJ SINE Alu 49 122 -180 258 171 26 13 chr5 2566469 2566545 -200518987 + (TA)n Simple_repeat Simple_repeat 1 77 0 831 199 0 17 chr5 2566546 2566722 -200518810 + AluJ SINE Alu 125 297 -15 373 365 15 0 chr5 2567655 2567813 -200517719 - MIR SINE MIR -62 146 15 395 345 40 17 chr5 2568022 2568196 -200517336 + MER5B DNA MER1_type 1 178 0 23 78 0 0 chr5 2569997 2570048 -200515484 + AT_rich Low_complexity Low_complexity 1 51 0 22 56 0 0 chr5 2570456 2570492 -200515040 + AT_rich Low_complexity Low_complexity 1 36 0 1733 160 17 3 chr5 2570763 2571057 -200514475 - AluJb SINE Alu -14 298 1 1846 114 66 79 chr5 2571940 2572318 -200513214 - THE1C LTR MaLR -2 373 1 1341 215 48 100 chr5 2572957 2573436 -200512096 + MLT1C LTR MaLR 6 459 -8 1206 174 4 17 chr5 2575523 2575764 -200509768 - L1MA3 LINE L1 0 6305 6068 285 350 17 8 chr5 2576548 2576665 -200508867 - MIR3 SINE MIR -53 155 38 245 73 0 24 chr5 2576774 2576815 -200508717 + (TTTTA)n Simple_repeat Simple_repeat 1 40 0 10103 29 2 0 chr5 2576815 2578746 -200506786 - L1PA3 LINE L1 -24 6131 4199 438 259 51 0 chr5 2581509 2581667 -200503865 - L1M4 LINE L1 -1638 4508 4343 1286 307 77 10 chr5 2582444 2583147 -200502385 + L1M4 LINE L1 3104 3853 -2293 892 185 70 182 chr5 2583147 2583902 -200501630 + MER4A LTR ERV1 1 870 -2 6174 183 25 70 chr5 2583929 2584810 -200500722 + L1MC1 LINE L1 1 920 -5506 258 32 0 0 chr5 2584810 2584841 -200500691 + (CA)n Simple_repeat Simple_repeat 2 32 0 6174 183 25 70 chr5 2584841 2585315 -200500217 + L1MC1 LINE L1 920 1286 -5140 6898 62 9 2 chr5 2585315 2586481 -200499051 + L1PA7 LINE L1 4979 6150 -4 6174 183 25 70 chr5 2586481 2586611 -200498921 + L1MC1 LINE L1 1286 1420 -5006 5036 227 85 42 chr5 2586596 2587394 -200498138 + L1MC1 LINE L1 1685 2446 -3980 * 291 154 19 0 chr5 2587394 2587446 -200498086 + LTR23 LTR ERV1 306 358 -79 5036 227 85 42 chr5 2587446 2589476 -200496056 + L1MC1 LINE L1 2446 4685 -1741 1738 199 55 19 chr5 2589485 2589902 -200495630 + MSTB1 LTR MaLR 1 432 0 2263 66 3 7 chr5 2589931 2590233 -200495299 + AluY SINE Alu 1 301 -10 388 219 0 0 chr5 2590240 2590304 -200495228 + MLT1D LTR MaLR 125 188 -317 4635 156 66 7 chr5 2590349 2591187 -200494345 + ERVL-B3 LTR ERVL 4871 5757 -7 1784 200 15 151 chr5 2591187 2591800 -200493732 + MLT2B3 LTR ERVL 1 408 -36 4644 197 79 14 chr5 2591800 2592607 -200492925 + L1MC1 LINE L1 4877 5631 -982 2003 124 48 0 chr5 2592607 2592897 -200492635 + AluSq SINE Alu 1 304 -9 4644 197 79 14 chr5 2592897 2593712 -200491820 + L1MC1 LINE L1 5631 6602 -11 554 255 136 53 chr5 2593716 2594034 -200491498 + L1M4 LINE L1 4067 4441 -1705 2272 89 0 0 chr5 2594034 2594340 -200491192 + AluY SINE Alu 1 306 0 554 255 136 53 chr5 2594340 2594506 -200491026 + L1M4 LINE L1 4441 4592 -1554 1441 76 0 0 chr5 2594893 2595065 -200490467 + AluSg/x SINE Alu 124 295 -17 249 262 16 0 chr5 2595505 2595566 -200489966 + MER45 DNA AcHobo 61 122 -56 942 185 75 5 chr5 2600471 2600671 -200484861 + L1MA4A LINE L1 5555 5768 -535 231 164 0 0 chr5 2600671 2600726 -200484806 - LTR66 LTR ERVL -162 448 394 551 131 0 4 chr5 2600768 2600869 -200484663 - L1MC/D LINE L1 -560 5682 5585 289 0 49 0 chr5 2600874 2600915 -200484617 + (TA)n Simple_repeat Simple_repeat 2 44 0 2266 156 78 11 chr5 2600916 2601390 -200484142 + L1MA4A LINE L1 5795 6300 -3 197 279 114 13 chr5 2602626 2602705 -200482827 + L2 LINE L2 3208 3294 -19 2023 122 3 20 chr5 2604061 2604356 -200481176 - AluSx SINE Alu 0 312 23 366 362 7 7 chr5 2604411 2604549 -200480983 + MER5B DNA MER1_type 35 172 -6 203 322 67 0 chr5 2609716 2609806 -200475726 + L2 LINE L2 3172 3267 -5 182 367 20 10 chr5 2609877 2609975 -200475557 - MIR SINE MIR -6 256 158 243 0 0 0 chr5 2610319 2610346 -200475186 + (TA)n Simple_repeat Simple_repeat 2 28 0 2268 65 65 0 chr5 2611988 2612280 -200473252 + AluY SINE Alu 1 311 0 193 311 77 46 chr5 2614039 2614235 -200471297 - L2 LINE L2 -490 2824 2623 429 343 50 15 chr5 2615283 2615624 -200469908 - HERV16 LTR ERVL -1217 4547 4195 697 294 81 15 chr5 2616290 2616623 -200468909 - HERV16 LTR ERVL -3845 1151 797 216 260 0 0 chr5 2616635 2616685 -200468847 + (TG)n Simple_repeat Simple_repeat 2 51 0 3064 145 19 6 chr5 2617939 2618464 -200467068 - L1MA2 LINE L1 0 6304 5773 1376 241 20 0 chr5 2619573 2619921 -200465611 - MLT1A1 LTR MaLR -2 363 9 2350 110 3 0 chr5 2619955 2620256 -200465276 + AluSp SINE Alu 1 302 -11 2213 113 0 0 chr5 2620496 2620789 -200464743 - AluSx SINE Alu -17 295 3 279 263 11 11 chr5 2621777 2621956 -200463576 + (CA)n Simple_repeat Simple_repeat 1 179 0 337 376 0 0 chr5 2622047 2622225 -200463307 + (CA)n Simple_repeat Simple_repeat 2 179 0 341 278 0 6 chr5 2622257 2622437 -200463095 + (CA)n Simple_repeat Simple_repeat 2 180 0 286 269 13 0 chr5 2622478 2622556 -200462976 + (CA)n Simple_repeat Simple_repeat 1 79 0 226 260 16 0 chr5 2622577 2622704 -200462828 + (CA)n Simple_repeat Simple_repeat 1 129 0 518 226 36 48 chr5 2623453 2623621 -200461911 + MER5A DNA MER1_type 2 167 -22 2019 131 35 26 chr5 2625015 2625359 -200460173 + THE1B LTR MaLR 18 364 0 1741 171 0 46 chr5 2625382 2625709 -200459823 + AluSx SINE Alu 1 312 0 4165 116 4 48 chr5 2626333 2627015 -200458517 + L1PA13 LINE L1 5505 6156 -7 2265 108 3 16 chr5 2627151 2627493 -200458039 - AluSq SINE Alu 0 313 1 257 363 80 55 chr5 2628477 2628766 -200456766 - L2 LINE L2 -1 3271 2976 315 332 87 23 chr5 2629007 2629399 -200456133 - L2 LINE L2 -646 2668 2252 491 266 42 60 chr5 2629542 2629876 -200455656 - MLT1D LTR MaLR -177 328 1 358 231 0 0 chr5 2630054 2630132 -200455400 - MLT1K LTR MaLR -61 527 450 281 218 72 4 chr5 2630787 2630876 -200454656 - MLT1J LTR MaLR -288 189 74 1273 173 35 35 chr5 2632449 2632733 -200452799 + L1MA5 LINE L1 6017 6300 0 957 253 104 20 chr5 2632750 2633106 -200452426 + MLT1C LTR MaLR 80 465 -2 239 274 71 12 chr5 2633812 2633896 -200451636 + L2 LINE L2 3185 3273 -40 258 81 0 0 chr5 2639201 2639238 -200446294 + (CA)n Simple_repeat Simple_repeat 2 38 0 2247 117 3 3 chr5 2640467 2640775 -200444757 - AluSx SINE Alu -4 308 1 326 228 89 41 chr5 2642974 2643097 -200442435 + L1ME4a LINE L1 5992 6120 -1 25 31 0 0 chr5 2643584 2643616 -200441916 + AT_rich Low_complexity Low_complexity 1 32 0 28 0 0 0 chr5 2643649 2643677 -200441855 + AT_rich Low_complexity Low_complexity 1 28 0 24 67 0 0 chr5 2644167 2644212 -200441320 + AT_rich Low_complexity Low_complexity 1 45 0 219 217 22 0 chr5 2645284 2645330 -200440202 - L2 LINE L2 -16 3256 3210 2058 95 32 14 chr5 2645426 2645755 -200439777 + AluSq SINE Alu 5 313 0 24 0 0 0 chr5 2645845 2645869 -200439663 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr5 2648769 2648791 -200436741 + AT_rich Low_complexity Low_complexity 1 22 0 675 160 0 0 chr5 2649297 2649403 -200436129 - AluSc SINE Alu -6 303 198 1425 94 6 0 chr5 2649403 2649584 -200435948 + AluSc SINE Alu 9 190 -119 233 282 0 24 chr5 2652630 2652715 -200432817 + GA-rich Low_complexity Low_complexity 2 84 0 21 0 0 0 chr5 2652816 2652837 -200432695 + AT_rich Low_complexity Low_complexity 1 21 0 222 91 0 0 chr5 2655519 2655552 -200429980 + (TC)n Simple_repeat Simple_repeat 2 34 0 200 209 23 0 chr5 2658968 2659011 -200426521 + (CAGA)n Simple_repeat Simple_repeat 1 44 0 638 132 48 12 chr5 2659018 2659185 -200426347 + (TAGA)n Simple_repeat Simple_repeat 4 176 0 490 133 31 8 chr5 2659212 2659340 -200426192 + (TAGA)n Simple_repeat Simple_repeat 4 134 0 3016 136 21 14 chr5 2659369 2659885 -200425647 - HSMAR2 DNA Mariner -2 1300 781 247 265 34 17 chr5 2659936 2660053 -200425479 + L1MEd LINE L1 990 1108 -5011 2439 174 31 0 chr5 2660983 2661398 -200424134 - MSTA LTR MaLR 0 428 1 229 294 11 0 chr5 2662194 2662286 -200423246 + L1MEd LINE L1 2833 2925 -3204 25 65 0 0 chr5 2662417 2662463 -200423069 + AT_rich Low_complexity Low_complexity 1 46 0 316 281 81 25 chr5 2662701 2662861 -200422671 - MIR SINE MIR 0 262 94 231 179 26 13 chr5 2662955 2663033 -200422499 + (TA)n Simple_repeat Simple_repeat 1 79 0 316 325 68 16 chr5 2663074 2663323 -200422209 + L1M4 LINE L1 5069 5330 -816 1479 255 3 3 chr5 2663548 2663905 -200421627 + L1PB4 LINE L1 5795 6151 -5 378 228 104 41 chr5 2663955 2664223 -200421309 - L1M4 LINE L1 -3057 3089 2805 * 875 288 18 0 chr5 2664220 2664498 -200421034 - L1ME2 LINE L1 -187 5977 5695 578 214 132 31 chr5 2664614 2664835 -200420697 - Charlie2 DNA MER1_type -106 2756 2490 1926 146 7 7 chr5 2664835 2665136 -200420396 + AluSx SINE Alu 1 301 -11 578 214 132 31 chr5 2665136 2665241 -200420291 - Charlie2 DNA MER1_type -372 2490 2397 410 279 268 4 chr5 2665247 2665516 -200420016 - Charlie2b DNA MER1_type -1748 1034 695 219 167 0 0 chr5 2665547 2665589 -200419943 + (TAGA)n Simple_repeat Simple_repeat 3 44 0 1441 206 62 62 chr5 2665698 2665907 -200419625 - MLT1A2 LTR MaLR 0 374 163 896 167 0 0 chr5 2665907 2666039 -200419493 - FLAM_C SINE Alu -1 132 1 1441 206 62 62 chr5 2666039 2666203 -200419329 - MLT1A2 LTR MaLR -210 164 1 298 282 130 0 chr5 2666207 2666338 -200419194 - Charlie2b DNA MER1_type -2207 575 428 356 360 20 0 chr5 2666369 2666519 -200419013 - Charlie2b DNA MER1_type -2544 318 166 533 232 34 11 chr5 2666520 2666697 -200418835 + L1MEc LINE L1 2168 2348 -4048 292 217 0 0 chr5 2666699 2666759 -200418773 + AluJ/monomer SINE Alu 241 300 -2 737 259 102 32 chr5 2666773 2667147 -200418385 + L1MEc LINE L1 2303 2702 -3513 348 189 90 115 chr5 2667152 2667199 -200418333 - MSTC LTR MaLR -242 123 76 2133 110 7 7 chr5 2667199 2667490 -200418042 - AluSp SINE Alu -22 291 1 348 189 90 115 chr5 2667490 2667564 -200417968 - MSTC LTR MaLR -289 76 5 21 36 0 0 chr5 2669404 2669432 -200416100 + AT_rich Low_complexity Low_complexity 1 28 0 1704 194 42 35 chr5 2669653 2670082 -200415450 - L1 LINE L1 -816 5330 4899 255 252 55 84 chr5 2670082 2670320 -200415212 + MLT1H LTR MaLR 221 451 -98 448 326 57 6 chr5 2670822 2670997 -200414535 + MIR SINE MIR 43 226 -36 1867 144 92 23 chr5 2672493 2672841 -200412691 + THE1C LTR MaLR 1 372 -3 689 164 4 0 chr5 2673360 2673592 -200411940 + (CA)n Simple_repeat Simple_repeat 1 233 0 270 293 140 25 chr5 2673648 2673805 -200411727 - MIR SINE MIR -10 252 78 23 33 0 0 chr5 2675240 2675270 -200410262 + AT_rich Low_complexity Low_complexity 1 30 0 1810 231 25 104 chr5 2675878 2676598 -200408934 + L1ME2 LINE L1 4615 5277 -869 815 212 0 0 chr5 2676607 2676753 -200408779 - FRAM SINE Alu -21 155 10 2229 246 60 29 chr5 2676771 2677259 -200408273 + L1ME2 LINE L1 5282 5804 -360 2849 104 8 8 chr5 2677259 2677634 -200407898 + THE1C LTR MaLR 1 375 0 2229 246 60 29 chr5 2677634 2677916 -200407616 + L1ME2 LINE L1 5804 6076 -88 194 250 40 53 chr5 2681611 2681687 -200403845 + L2 LINE L2 1634 1708 -1606 1578 183 3 13 chr5 2681718 2682045 -200403487 + AluJo SINE Alu 1 312 0 1209 140 5 5 chr5 2682521 2682714 -200402818 - L1PA13 LINE L1 -5 6158 5966 1464 117 2 14 chr5 2682714 2682988 -200402544 + L1PA12 LINE L1 5754 6017 -114 664 315 247 3 chr5 2683025 2683660 -200401872 + L2 LINE L2 2186 2975 -339 353 201 141 67 chr5 2684444 2684593 -200400939 + L1MC4 LINE L1 7688 7847 -195 4774 225 53 39 chr5 2684666 2685231 -200400301 + L1MD1 LINE L1 1136 1692 -4848 1608 174 48 61 chr5 2685231 2685610 -200399922 + MLT1A2 LTR MaLR 1 374 0 4774 225 53 39 chr5 2685610 2686552 -200398980 + L1MD1 LINE L1 1692 2623 -3917 1863 159 6 25 chr5 2686552 2686674 -200398858 + AluSx SINE Alu 1 124 -188 351 0 0 0 chr5 2686674 2686713 -200398819 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 1863 159 6 25 chr5 2686713 2686905 -200398627 + AluSx SINE Alu 124 309 -3 4774 225 53 39 chr5 2686905 2687216 -200398316 + L1MD1 LINE L1 2623 2928 -3612 325 167 0 0 chr5 2687237 2687291 -200398241 - LTR16C LTR ERVL -30 461 408 1444 267 17 8 chr5 2687333 2687808 -200397724 + L1MD1 LINE L1 2959 3437 -3103 1400 243 41 10 chr5 2687801 2688002 -200397530 + L1MD1 LINE L1 5964 6157 -405 * 779 191 0 22 chr5 2688002 2688138 -200397394 + FLAM_C SINE Alu 1 133 0 1400 243 41 10 chr5 2688138 2688343 -200397189 + L1MD1 LINE L1 6157 6380 -182 735 164 37 22 chr5 2688351 2688485 -200397047 + FLAM_C SINE Alu 2 137 -6 453 275 35 7 chr5 2688598 2688740 -200396792 + LTR16C LTR ERVL 316 461 -30 2542 219 9 6 chr5 2688929 2689462 -200396070 - MLT1-int LTR MaLR -835 536 2 21 36 0 0 chr5 2689630 2689658 -200395874 + AT_rich Low_complexity Low_complexity 1 28 0 3064 198 18 36 chr5 2689794 2689970 -200395562 + L1MB3 LINE L1 5446 5624 -559 1575 167 16 46 chr5 2689970 2690105 -200395427 + AluJb SINE Alu 1 138 -174 2024 138 7 0 chr5 2690105 2690402 -200395130 + AluSx SINE Alu 3 301 -11 1575 167 16 46 chr5 2690402 2690571 -200394961 + AluJb SINE Alu 138 296 -16 3064 198 18 36 chr5 2690571 2691067 -200394465 + L1MB3 LINE L1 5624 6106 -77 21 36 0 0 chr5 2691311 2691339 -200394193 + AT_rich Low_complexity Low_complexity 1 28 0 414 269 62 24 chr5 2692527 2692735 -200392797 + MER20 DNA MER1_type 1 216 -3 2498 58 0 29 chr5 2692957 2693270 -200392262 - AluY SINE Alu -7 304 1 499 293 80 52 chr5 2693432 2693920 -200391612 - L2 LINE L2 -208 3064 2556 1879 171 3 0 chr5 2694129 2694428 -200391104 - AluJo SINE Alu -12 300 1 210 71 0 0 chr5 2694951 2694979 -200390553 + (TG)n Simple_repeat Simple_repeat 1 28 0 305 275 58 72 chr5 2694981 2695119 -200390413 - L2 LINE L2 0 3272 3137 488 226 80 0 chr5 2696296 2696433 -200389099 - L1ME1 LINE L1 -65 6101 5954 1490 193 51 10 chr5 2696568 2696864 -200388668 - AluJb SINE Alu -4 308 1 2565 169 55 29 chr5 2696972 2697276 -200388256 + MER7C DNA MER2_type 40 366 -2662 2265 83 0 64 chr5 2697276 2697603 -200387929 - AluSq SINE Alu -7 306 1 2565 169 55 29 chr5 2697603 2697847 -200387685 + MER7C DNA MER2_type 366 602 0 21 0 0 0 chr5 2698088 2698109 -200387423 + AT_rich Low_complexity Low_complexity 1 21 0 1495 268 106 19 chr5 2699741 2700356 -200385176 + L1MCa LINE L1 21 688 -5738 1558 215 95 23 chr5 2702789 2702835 -200382697 - MLT2C2 LTR ERVL -1 463 422 285 98 0 0 chr5 2702835 2702876 -200382656 + (CA)n Simple_repeat Simple_repeat 2 42 0 1558 215 95 23 chr5 2702876 2703261 -200382271 - MLT2C2 LTR ERVL -42 422 1 183 80 0 0 chr5 2703463 2703488 -200382044 + (TG)n Simple_repeat Simple_repeat 2 26 0 1981 156 0 13 chr5 2704234 2704548 -200380984 + AluJb SINE Alu 1 310 -2 33 25 0 0 chr5 2704593 2704633 -200380899 + AT_rich Low_complexity Low_complexity 1 40 0 2759 32 0 0 chr5 2705083 2705391 -200380141 - AluY SINE Alu -3 308 1 27 49 0 0 chr5 2706872 2706913 -200378619 + AT_rich Low_complexity Low_complexity 1 41 0 697 259 49 5 chr5 2707279 2707484 -200378048 - MER20 DNA MER1_type -5 214 1 2149 134 3 0 chr5 2708012 2708319 -200377213 + AluSg SINE Alu 1 308 -2 565 301 75 84 chr5 2708468 2709008 -200376524 + L1MC/D LINE L1 5245 5780 -747 24 32 0 0 chr5 2709281 2709312 -200376220 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr5 2710043 2710064 -200375468 + AT_rich Low_complexity Low_complexity 1 21 0 270 136 0 0 chr5 2710211 2710255 -200375277 + (T)n Simple_repeat Simple_repeat 1 44 0 22 56 0 0 chr5 2710542 2710578 -200374954 + AT_rich Low_complexity Low_complexity 1 36 0 180 158 0 0 chr5 2710791 2710829 -200374703 + (TG)n Simple_repeat Simple_repeat 2 39 0 396 0 0 0 chr5 2713106 2713150 -200372382 + (CA)n Simple_repeat Simple_repeat 2 45 0 672 36 0 0 chr5 2716592 2716675 -200368857 + (TC)n Simple_repeat Simple_repeat 2 84 0 2310 42 0 0 chr5 2718888 2719152 -200366380 + AluY SINE Alu 40 303 -8 1950 169 80 3 chr5 2719389 2719762 -200365770 + MER57A LTR ERV1 2 403 0 2144 122 0 3 chr5 2719910 2720205 -200365327 - AluSq SINE Alu -15 298 5 2655 34 7 0 chr5 2720634 2720932 -200364600 - AluY SINE Alu -11 300 1 24 0 0 0 chr5 2720995 2721019 -200364513 + AT_rich Low_complexity Low_complexity 1 24 0 2023 147 0 10 chr5 2721021 2721334 -200364198 + AluSg SINE Alu 1 310 0 1916 138 56 30 chr5 2721354 2721658 -200363874 + AluJb SINE Alu 1 312 0 1032 70 0 0 chr5 2721828 2721957 -200363575 - AluY SINE Alu -6 305 177 1988 137 0 3 chr5 2722756 2723049 -200362483 + AluJo SINE Alu 14 305 -7 2133 148 0 0 chr5 2723076 2723423 -200362109 + AluSq SINE Alu 1 347 0 182 405 0 0 chr5 2723446 2723520 -200362012 - MIR SINE MIR -12 250 177 219 36 0 0 chr5 2725325 2725353 -200360179 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 492 304 170 37 chr5 2725497 2725955 -200359577 - L2 LINE L2 -365 2949 2431 741 143 24 18 chr5 2727644 2727812 -200357720 + G-rich Low_complexity Low_complexity 2 170 0 205 104 0 42 chr5 2727826 2727874 -200357658 + (GGGGA)n Simple_repeat Simple_repeat 4 49 0 1868 159 10 0 chr5 2731915 2732241 -200353291 - AluSx SINE Alu 0 312 1 1367 230 7 3 chr5 2734333 2734637 -200350895 + MLT1A1 LTR MaLR 1 305 -60 214 169 31 0 chr5 2734814 2734879 -200350653 + (TCTA)n Simple_repeat Simple_repeat 2 68 0 391 313 129 16 chr5 2734879 2735189 -200350343 + HAL1 LINE L1 858 1202 -1305 2175 97 40 3 chr5 2735687 2735986 -200349546 - AluY SINE Alu -1 310 1 288 125 18 0 chr5 2737821 2737877 -200347655 - L1PB2 LINE L1 -3 6148 6092 2243 105 10 0 chr5 2737879 2738173 -200347359 - AluSg SINE Alu -11 299 3 1012 227 122 34 chr5 2739641 2740036 -200345496 + MLT1C LTR MaLR 2 390 0 2326 105 0 0 chr5 2740287 2740582 -200344950 - AluSx SINE Alu -17 295 1 2045 128 7 0 chr5 2742210 2742499 -200343033 + AluSx SINE Alu 1 291 -21 211 68 0 68 chr5 2742502 2742546 -200342986 + (TAAA)n Simple_repeat Simple_repeat 4 44 0 1736 47 5 0 chr5 2743085 2743299 -200342233 + L1PA4 LINE L1 5940 6154 -1 1570 44 0 0 chr5 2743825 2744008 -200341524 + L1PA5 LINE L1 5964 6146 -8 591 276 116 24 chr5 2744058 2744428 -200341104 - MLT1I LTR MaLR -1 408 5 2161 93 7 0 chr5 2744800 2745089 -200340443 - AluSx SINE Alu -21 291 1 2135 139 0 0 chr5 2745860 2746170 -200339362 - AluSx SINE Alu -1 311 2 964 201 126 57 chr5 2746196 2746529 -200339003 + MLT1A1 LTR MaLR 4 359 -6 1678 122 30 19 chr5 2746530 2746801 -200338731 - L1MB2 LINE L1 -41 6130 5857 7849 214 56 19 chr5 2746805 2748303 -200337229 - L1MB2 LINE L1 -631 5552 3946 2221 106 3 0 chr5 2748303 2748605 -200336927 - AluSp SINE Alu -10 303 1 7849 214 56 19 chr5 2748605 2749401 -200336131 - L1MB2 LINE L1 -2237 3946 3181 246 222 32 0 chr5 2749731 2749794 -200335738 + (TCTA)n Simple_repeat Simple_repeat 2 66 0 633 323 69 41 chr5 2749837 2750227 -200335305 - MLT1I LTR MaLR -2 407 7 379 292 169 64 chr5 2750309 2750730 -200334802 + L1ME LINE L1 5272 5736 -430 1426 178 108 93 chr5 2752739 2752874 -200332658 + MLT2C2 LTR ERVL 1 132 -332 843 120 0 24 chr5 2752874 2752999 -200332533 - FLAM_C SINE Alu -11 122 1 1426 178 108 93 chr5 2752999 2753262 -200332270 + MLT2C2 LTR ERVL 132 405 -59 288 120 0 0 chr5 2753309 2753359 -200332173 + (CA)n Simple_repeat Simple_repeat 2 51 0 21 0 0 0 chr5 2755246 2755267 -200330265 + AT_rich Low_complexity Low_complexity 1 21 0 799 205 15 19 chr5 2755267 2755472 -200330060 - L1MA9 LINE L1 -37 6275 6072 259 100 60 0 chr5 2755882 2755932 -200329600 - L1MA9 LINE L1 -241 6071 6019 2713 130 17 9 chr5 2757078 2757500 -200328032 - MSTA LTR MaLR 0 428 4 238 184 102 0 chr5 2757571 2757620 -200327912 + L2 LINE L2 3213 3266 -6 26 88 0 0 chr5 2758208 2758276 -200327256 + AT_rich Low_complexity Low_complexity 1 68 0 378 340 48 14 chr5 2759385 2759532 -200326000 - MIR SINE MIR -4 258 107 25 0 0 0 chr5 2760213 2760238 -200325294 + AT_rich Low_complexity Low_complexity 1 25 0 1794 126 48 0 chr5 2760246 2760538 -200324994 + AluSx SINE Alu 1 305 0 1774 244 125 70 chr5 2760610 2761323 -200324209 + MER21B LTR ERV1 1 752 -111 183 80 0 0 chr5 2761339 2761364 -200324168 + (A)n Simple_repeat Simple_repeat 1 25 0 184 373 63 0 chr5 2761478 2761620 -200323912 + MIR SINE MIR 28 178 -84 359 242 0 11 chr5 2761774 2761865 -200323667 - MLT1A2 LTR MaLR -114 276 187 197 139 23 0 chr5 2761874 2761917 -200323615 + GA-rich Low_complexity Low_complexity 1 44 0 369 209 131 69 chr5 2761922 2762083 -200323449 - MLT1A2 LTR MaLR -217 173 3 5914 118 17 1 chr5 2762130 2763333 -200322199 + L1PA13 LINE L1 4961 6158 -5 1985 129 3 0 chr5 2763333 2763643 -200321889 + AluSx SINE Alu 1 311 -1 248 307 64 21 chr5 2764967 2765107 -200320425 - LTR67 LTR ERVL -4 553 408 1768 141 32 0 chr5 2766525 2766809 -200318723 + AluSx SINE Alu 1 293 -19 294 125 0 0 chr5 2766809 2766857 -200318675 + (GGAA)n Simple_repeat Simple_repeat 1 48 0 1103 119 6 0 chr5 2766859 2767035 -200318497 + (GAAA)n Simple_repeat Simple_repeat 3 179 0 200 278 69 0 chr5 2767116 2767188 -200318344 + MIR3 SINE MIR 115 191 -17 213 65 0 0 chr5 2767384 2767415 -200318117 + (CA)n Simple_repeat Simple_repeat 2 32 0 188 297 16 0 chr5 2768205 2768269 -200317263 + MIR SINE MIR 194 258 -4 660 256 61 17 chr5 2769681 2770004 -200315528 + MER31B LTR ERV1 2 661 0 600 244 31 12 chr5 2770722 2770882 -200314650 - L1MD3 LINE L1 -13 7982 7820 681 261 168 28 chr5 2770905 2771106 -200314426 + L1MC4a LINE L1 7299 7555 -253 1727 188 5 72 chr5 2771106 2771520 -200314012 - MLT1B LTR MaLR -4 386 1 681 261 168 28 chr5 2771520 2771609 -200313923 + L1MC4a LINE L1 7555 7630 -178 2215 110 0 0 chr5 2771621 2771922 -200313610 - AluSg SINE Alu -9 301 1 2492 117 14 0 chr5 2772750 2773109 -200312423 + THE1B LTR MaLR 1 364 0 467 290 134 44 chr5 2773155 2773721 -200311811 - L1ME4a LINE L1 -240 5881 5265 2282 76 0 3 chr5 2774033 2774335 -200311197 - AluY SINE Alu -10 301 1 273 57 0 0 chr5 2775969 2776004 -200309528 + (A)n Simple_repeat Simple_repeat 1 35 0 393 241 52 9 chr5 2777928 2778044 -200307488 + L1MC3 LINE L1 7019 7139 -646 2061 220 70 55 chr5 2778078 2778750 -200306782 + L1MD3 LINE L1 7314 7995 0 1500 149 23 62 chr5 2779388 2779696 -200305836 + AluJb SINE Alu 1 296 -16 568 259 202 3 chr5 2780125 2780496 -200305036 + Charlie2 DNA MER1_type 1886 2330 -532 346 239 128 13 chr5 2780542 2780776 -200304756 + Charlie2 DNA MER1_type 2402 2662 -200 3428 35 2 0 chr5 2780863 2781265 -200304267 - L1PA5 LINE L1 -11 6143 5741 437 311 14 0 chr5 2781326 2781474 -200304058 + Charlie2 DNA MER1_type 2670 2819 -43 2095 90 28 3 chr5 2781480 2781769 -200303763 + AluSc SINE Alu 1 296 -13 29 0 0 0 chr5 2784309 2784338 -200301194 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr5 2788086 2788121 -200297411 + AT_rich Low_complexity Low_complexity 1 35 0 239 212 15 0 chr5 2789327 2789393 -200296139 - L1ME4a LINE L1 -12 6109 6043 213 154 0 0 chr5 2789957 2789996 -200295536 + (CA)n Simple_repeat Simple_repeat 1 39 0 673 210 84 0 chr5 2790107 2790274 -200295258 - L1ME4a LINE L1 -501 5663 5483 315 258 107 67 chr5 2790284 2790509 -200295023 + L1MEd LINE L1 861 1094 -5025 618 156 10 15 chr5 2790512 2790718 -200294814 + (TAGA)n Simple_repeat Simple_repeat 1 205 0 203 197 28 28 chr5 2793644 2793715 -200291817 + (TA)n Simple_repeat Simple_repeat 2 72 0 195 167 0 0 chr5 2793716 2793758 -200291774 + (CA)n Simple_repeat Simple_repeat 1 42 0 435 85 37 0 chr5 2793921 2794003 -200291529 + (CA)n Simple_repeat Simple_repeat 1 85 0 371 106 15 0 chr5 2794148 2794214 -200291318 + (CA)n Simple_repeat Simple_repeat 1 67 0 224 188 38 25 chr5 2794306 2794386 -200291146 + (TA)n Simple_repeat Simple_repeat 2 82 0 306 87 0 0 chr5 2794387 2794433 -200291099 + (CA)n Simple_repeat Simple_repeat 1 46 0 3403 144 44 72 chr5 2794445 2795168 -200290364 - Tigger3b DNA MER2_type 0 1231 529 3363 200 2 0 chr5 2795168 2795813 -200289719 - L1P LINE L1 -1632 4514 3869 635 146 45 0 chr5 2795813 2795919 -200289613 + L1PA13 LINE L1 6034 6148 -15 3419 254 28 7 chr5 2795937 2796865 -200288667 + L1M4 LINE L1 4005 4952 -1194 2295 188 120 12 chr5 2797276 2797766 -200287766 - Tigger3b DNA MER2_type -688 543 1 615 278 78 39 chr5 2797772 2798103 -200287429 - MLT2C1 LTR ERVL -51 346 3 1672 217 30 2 chr5 2802225 2802630 -200282902 - L1MC1 LINE L1 -1 6332 5917 263 170 0 0 chr5 2802630 2802677 -200282855 - MLT2B2 LTR ERVL 0 515 469 702 202 0 0 chr5 2802677 2802855 -200282677 + (CA)n Simple_repeat Simple_repeat 1 178 0 474 251 0 0 chr5 2802867 2803030 -200282502 + (CA)n Simple_repeat Simple_repeat 2 164 0 580 241 77 91 chr5 2803074 2803427 -200282105 - MLT2B2 LTR ERVL -65 349 2 873 239 198 6 chr5 2803481 2803795 -200281737 - MLT1A2 LTR MaLR 0 374 1 1552 220 3 3 chr5 2803817 2804131 -200281401 - L1MC1 LINE L1 -479 5854 5541 1677 79 130 58 chr5 2804211 2804488 -200281044 - AluSp SINE Alu -15 298 2 233 227 0 0 chr5 2805512 2805556 -200279976 + (CCA)n Simple_repeat Simple_repeat 3 46 0 571 232 211 0 chr5 2805566 2805760 -200279772 - MIR SINE MIR -18 244 10 959 246 159 36 chr5 2808385 2808825 -200276707 + MLT1D LTR MaLR 5 498 -7 217 289 96 19 chr5 2808829 2808933 -200276599 - MIR SINE MIR -40 222 111 251 232 0 98 chr5 2811014 2811096 -200274436 - MIR SINE MIR -112 150 77 227 261 43 0 chr5 2812036 2812105 -200273427 - L2 LINE L2 -621 2693 2622 2004 208 42 62 chr5 2813431 2813959 -200271573 - LTR9 LTR ERV1 -95 517 1 659 254 23 17 chr5 2813963 2814140 -200271392 - MLT1A1 LTR MaLR -185 180 3 2052 118 0 9 chr5 2814149 2814464 -200271068 - AluSq SINE Alu -1 312 1 272 222 91 30 chr5 2814482 2814581 -200270951 - MER103 DNA DNA -45 121 17 28 0 0 0 chr5 2814733 2814761 -200270771 + AT_rich Low_complexity Low_complexity 1 28 0 403 218 0 73 chr5 2814779 2814889 -200270643 + MER58 DNA MER1_type 2318 2419 -1 3426 251 85 65 chr5 2815395 2816168 -200269364 + L1ME2 LINE L1 2771 3527 -2637 1396 141 45 0 chr5 2816168 2816388 -200269144 + MER30 DNA MER1_type 1 230 0 3426 251 85 65 chr5 2816388 2817217 -200268315 + L1ME2 LINE L1 3527 4338 -1826 2258 86 7 0 chr5 2817217 2817519 -200268013 + AluSg SINE Alu 1 304 -6 3426 251 85 65 chr5 2817519 2819232 -200266300 + L1ME2 LINE L1 4338 6157 -7 477 0 0 0 chr5 2819232 2819285 -200266247 + (CA)n Simple_repeat Simple_repeat 2 54 0 488 268 94 54 chr5 2821027 2821251 -200264281 + MLT1E LTR MaLR 8 240 -353 1770 250 23 69 chr5 2821258 2821909 -200263623 - MER74B LTR ERVL -1 621 1 930 243 55 16 chr5 2821915 2822170 -200263362 + MLT1E LTR MaLR 329 593 0 213 224 35 17 chr5 2822713 2822771 -200262761 + MIR SINE MIR 108 166 -96 630 322 105 10 chr5 2822783 2823174 -200262358 - MER110 LTR ERV1 -1 490 63 1326 287 58 9 chr5 2824212 2824647 -200260885 - MLT1E2 LTR MaLR 0 626 169 1409 251 90 14 chr5 2824647 2825070 -200260462 + MLT1C LTR MaLR 1 455 -12 528 225 94 7 chr5 2825074 2825212 -200260320 - MLT1E2 LTR MaLR -466 160 11 317 217 169 0 chr5 2825227 2825310 -200260222 - MIR SINE MIR -61 201 105 3489 159 10 26 chr5 2827699 2828134 -200257398 + MER50 LTR ERV1 135 559 -175 2361 83 0 3 chr5 2828134 2828446 -200257086 - AluY SINE Alu 0 311 1 3489 159 10 26 chr5 2828446 2828620 -200256912 + MER50 LTR ERV1 559 734 0 1883 131 14 7 chr5 2830500 2830791 -200254741 + AluSx SINE Alu 3 295 -17 552 30 0 0 chr5 2830791 2830857 -200254675 + (GGAA)n Simple_repeat Simple_repeat 2 67 0 624 253 134 35 chr5 2882443 2882922 -200202610 - MER34 LTR ERV1 0 542 17 2033 76 45 24 chr5 2882994 2883282 -200202250 + AluY SINE Alu 17 310 -1 394 264 100 80 chr5 2883358 2883759 -200201773 - MLT1H LTR MaLR -7 542 134 2277 91 3 0 chr5 2884338 2884634 -200200898 + AluY SINE Alu 1 297 -14 221 246 82 27 chr5 2885014 2885124 -200200408 + L2 LINE L2 1722 1837 -1477 1425 282 63 17 chr5 2885218 2886067 -200199465 - L1ME3 LINE L1 -88 6143 5221 553 305 97 2 chr5 2886127 2886259 -200199273 - L1ME3 LINE L1 -1627 4588 4470 594 268 58 10 chr5 2886259 2886464 -200199068 + MER58C DNA MER1_type 1 215 0 553 305 97 2 chr5 2886464 2886797 -200198735 - L1ME3 LINE L1 -1745 4470 4079 310 172 0 0 chr5 2886833 2886891 -200198641 - Alu SINE Alu -3 298 241 717 177 61 0 chr5 2886891 2887038 -200198494 - L1PA16 LINE L1 -45 6121 5966 * 1167 316 18 15 chr5 2887033 2887708 -200197824 - L1ME3 LINE L1 -2162 4053 3377 349 304 84 24 chr5 2887713 2888693 -200196839 - L1ME3 LINE L1 -4027 2369 1254 435 163 0 0 chr5 2888750 2888830 -200196702 + CT-rich Low_complexity Low_complexity 2 81 0 186 43 0 0 chr5 2891816 2891839 -200193693 + (CA)n Simple_repeat Simple_repeat 1 23 0 33 25 0 0 chr5 2893037 2893077 -200192455 + AT_rich Low_complexity Low_complexity 1 40 0 396 292 81 6 chr5 2893899 2894060 -200191472 - MLT1I LTR MaLR -144 265 93 1754 161 137 11 chr5 2894189 2894569 -200190963 + MSTA LTR MaLR 1 428 0 2180 105 10 0 chr5 2895541 2895835 -200189697 - AluSp SINE Alu -16 297 1 2129 99 11 11 chr5 2895835 2896117 -200189415 - AluSx SINE Alu -10 302 21 378 325 113 29 chr5 2897470 2898275 -200187257 - L1M4 LINE L1 -1101 5045 4173 2282 106 7 7 chr5 2899527 2899829 -200185703 - AluSq SINE Alu -11 302 1 259 354 0 0 chr5 2902290 2902389 -200183143 + MIR SINE MIR 140 238 -24 1920 96 44 11 chr5 2902398 2902689 -200182843 + AluY SINE Alu 1 300 0 212 200 20 0 chr5 2903459 2903509 -200182023 + (AATAG)n Simple_repeat Simple_repeat 4 54 0 232 180 73 62 chr5 2903733 2903911 -200181621 + (TG)n Simple_repeat Simple_repeat 1 180 0 461 316 128 47 chr5 2904740 2905308 -200180224 + L1MC4a LINE L1 5025 5634 -755 21 36 0 0 chr5 2905347 2905375 -200180157 + AT_rich Low_complexity Low_complexity 1 28 0 318 335 34 25 chr5 2905446 2905685 -200179847 + L1MC4a LINE L1 5737 5977 -1831 24 32 0 0 chr5 2907414 2907445 -200178087 + AT_rich Low_complexity Low_complexity 1 31 0 180 0 0 0 chr5 2907819 2907839 -200177693 + (T)n Simple_repeat Simple_repeat 1 20 0 1186 220 57 31 chr5 2911625 2912028 -200173504 - MLT1B LTR MaLR -1 373 9 360 197 14 0 chr5 2912351 2912422 -200173110 - MER1B DNA MER1_type -139 158 87 529 200 21 15 chr5 2912834 2912980 -200172552 - MER1B DNA MER1_type -182 115 1 490 312 70 34 chr5 2914437 2914735 -200170797 + MER58B DNA MER1_type 10 318 -23 693 243 101 30 chr5 2914853 2915149 -200170383 - LTR54B LTR ERV1 -2 496 180 189 107 0 0 chr5 2915630 2915658 -200169874 + (CAA)n Simple_repeat Simple_repeat 3 30 0 388 265 5 69 chr5 2916755 2917016 -200168516 + GA-rich Low_complexity Low_complexity 1 244 0 37 99 0 0 chr5 2917236 2917357 -200168175 + AT_rich Low_complexity Low_complexity 1 121 0 664 273 61 63 chr5 2918978 2919120 -200166412 + MLT1C LTR MaLR 43 184 -283 2441 77 0 0 chr5 2919120 2919420 -200166112 + AluY SINE Alu 3 302 -9 664 273 61 63 chr5 2919420 2919687 -200165845 + MLT1C LTR MaLR 184 451 -16 212 371 71 0 chr5 2920759 2920899 -200164633 - MIR SINE MIR -21 241 92 186 43 0 0 chr5 2921266 2921289 -200164243 + (GA)n Simple_repeat Simple_repeat 2 24 0 187 191 128 0 chr5 2922997 2923044 -200162488 + L2 LINE L2 2394 2446 -868 1494 235 37 18 chr5 2923588 2923971 -200161561 + MLT1B LTR MaLR 1 390 0 2325 114 0 9 chr5 2924028 2924343 -200161189 + AluSx SINE Alu 1 312 0 2500 54 0 3 chr5 2925229 2925525 -200160007 - AluY SINE Alu -15 296 2 288 143 0 0 chr5 2925657 2925713 -200159819 + (CCCTAA)n Simple_repeat Simple_repeat 1 56 0 222 62 0 0 chr5 2927983 2928015 -200157517 + (CA)n Simple_repeat Simple_repeat 2 33 0 1069 78 0 48 chr5 2930367 2930533 -200154999 + MER30B DNA MER1_type 23 180 -10 355 244 33 0 chr5 2930855 2930945 -200154587 - MER81 DNA DNA 0 114 22 1309 202 133 22 chr5 2931037 2931452 -200154080 + MLT1C LTR MaLR 7 467 0 1513 118 36 5 chr5 2931893 2932114 -200153418 - MER30 DNA MER1_type 0 230 3 708 145 90 24 chr5 2932466 2932623 -200152909 - MLT2C1 LTR ERVL -40 480 199 22 35 0 0 chr5 2933560 2933589 -200151943 + AT_rich Low_complexity Low_complexity 1 29 0 29 47 0 0 chr5 2933685 2933728 -200151804 + AT_rich Low_complexity Low_complexity 1 43 0 189 0 0 0 chr5 2934859 2934880 -200150652 + (ATTG)n Simple_repeat Simple_repeat 2 22 0 4859 216 33 48 chr5 2935736 2937293 -200148239 + Looper DNA T2_type 1 1534 -24 324 0 0 0 chr5 2937294 2937330 -200148202 + (TTTA)n Simple_repeat Simple_repeat 3 38 0 1741 215 146 30 chr5 2937341 2937807 -200147725 - MLT2B1 LTR ERVL 0 520 1 188 200 17 0 chr5 2938176 2938236 -200147296 + GA-rich Low_complexity Low_complexity 2 62 0 360 245 31 10 chr5 2939304 2939402 -200146130 + MER69 DNA AcHobo 41 140 -1086 189 0 0 0 chr5 2939871 2939892 -200145640 + (T)n Simple_repeat Simple_repeat 1 21 0 839 265 71 36 chr5 2940375 2940767 -200144765 + MLT1C LTR MaLR 60 465 -2 4050 116 20 3 chr5 2942391 2942995 -200142537 - L1PA13 LINE L1 -4 6159 5546 21 0 0 0 chr5 2943093 2943114 -200142418 + AT_rich Low_complexity Low_complexity 1 21 0 526 152 0 103 chr5 2943677 2943822 -200141710 + MER96B DNA MER1_type? 238 367 -50 294 300 0 42 chr5 2944604 2944724 -200140808 - L2 LINE L2 -2 3311 3197 2162 139 0 7 chr5 2945015 2945325 -200140207 + AluSx SINE Alu 1 308 -4 306 182 106 15 chr5 2945778 2945844 -200139688 + MIR3 SINE MIR 110 181 -27 707 197 34 11 chr5 2946381 2946559 -200138973 + MER96B DNA MER1_type? 2 183 -234 1608 196 68 46 chr5 2947163 2947616 -200137916 - MER31B LTR ERV1 0 466 4 210 341 57 48 chr5 2948755 2948984 -200136548 - L2 LINE L2 -638 2676 2446 23 0 0 0 chr5 2949056 2949079 -200136453 + AT_rich Low_complexity Low_complexity 1 23 0 540 323 72 26 chr5 2949079 2949494 -200136038 + L1MC/D LINE L1 4160 4593 -1553 433 327 92 58 chr5 2950425 2950926 -200134606 + L1MC/D LINE L1 5307 5824 -1984 26 64 0 0 chr5 2951741 2951788 -200133744 + AT_rich Low_complexity Low_complexity 1 47 0 803 244 117 7 chr5 2951901 2952208 -200133324 - MER2 DNA MER2_type -3 341 1 237 148 140 0 chr5 2952211 2952278 -200133254 + MIR SINE MIR 53 141 -67 22 0 0 0 chr5 2952424 2952446 -200133086 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr5 2952597 2952625 -200132907 + AT_rich Low_complexity Low_complexity 1 28 0 1831 23 5 0 chr5 2953136 2953353 -200132179 - L1PA4 LINE L1 0 6155 5938 202 265 0 0 chr5 2954520 2954569 -200130963 + GA-rich Low_complexity Low_complexity 1 49 0 1178 251 28 3 chr5 2955164 2955527 -200130005 - L1MB1 LINE L1 0 6168 5798 360 258 118 39 chr5 2956481 2956659 -200128873 - L3 LINE CR1 -231 1346 1155 222 216 0 20 chr5 2959371 2959422 -200126110 - L2 LINE L2 -2 3311 3262 320 319 35 0 chr5 2961093 2961209 -200124323 - MIR SINE MIR -108 154 35 255 312 51 13 chr5 2962226 2962383 -200123149 + MER103 DNA DNA 2 164 -2 466 222 31 8 chr5 2962542 2962716 -200122816 + MER61B LTR ERV1 1 105 -320 1412 179 36 11 chr5 2962786 2963065 -200122467 + MER61D LTR ERV1 216 501 0 1864 119 141 28 chr5 2964017 2964344 -200121188 + THE1B LTR MaLR 1 364 0 1654 215 74 17 chr5 2966024 2966442 -200119090 + MLT2B1 LTR ERVL 1 442 -78 1583 287 20 33 chr5 2967810 2968409 -200117123 + L1M2b LINE L1 14 604 -6605 594 241 48 35 chr5 2968607 2968817 -200116715 + L1M2b LINE L1 1685 1881 -5328 3695 210 16 47 chr5 2968953 2970228 -200115304 + L1M2b LINE L1 2162 3396 -3812 806 185 0 0 chr5 2970231 2970377 -200115155 + Tigger1 DNA MER2_type 1 146 -2272 1090 172 5 18 chr5 2970377 2970598 -200114934 + Tigger1 DNA MER2_type 2201 2418 0 9951 193 27 5 chr5 2970601 2972901 -200112631 + L1M2b LINE L1 3406 5757 -1451 864 177 43 22 chr5 2972904 2973136 -200112396 + L1MA5 LINE L1 3972 4208 -3000 573 135 10 0 chr5 2973126 2973230 -200112302 + L1MA5 LINE L1 5753 5857 -1351 * 5087 169 21 24 chr5 2973210 2974785 -200110747 + L1MA5 LINE L1 5789 7357 -5 1383 124 44 26 chr5 2975198 2975424 -200110108 - MER30 DNA MER1_type 0 230 1 2114 146 7 3 chr5 2975784 2976093 -200109439 + AluSx SINE Alu 3 312 0 21 0 0 0 chr5 2978062 2978083 -200107449 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 2978167 2978188 -200107344 + AT_rich Low_complexity Low_complexity 1 21 0 634 305 72 90 chr5 2980136 2980958 -200104574 + L1MDa LINE L1 1236 2042 -4498 9340 104 2 3 chr5 2981142 2983301 -200102231 + L1PA8 LINE L1 4014 6172 0 428 266 62 41 chr5 2983438 2983652 -200101880 + L1MDa LINE L1 2537 2760 -3780 866 94 78 0 chr5 2983652 2983780 -200101752 - MER85 DNA T2_type -1 138 1 428 266 62 41 chr5 2983780 2983855 -200101677 + L1MDa LINE L1 2760 2832 -3708 249 296 19 0 chr5 2983864 2983972 -200101560 - L1M4 LINE L1 -3570 2576 2467 406 264 111 0 chr5 2984108 2984316 -200101216 + L1MDa LINE L1 3176 3406 -3134 1466 160 33 4 chr5 2984318 2984593 -200100939 + L1PA16 LINE L1 5869 6151 -15 866 81 8 0 chr5 2984605 2984728 -200100804 - L1PB1 LINE L1 0 6151 6028 3644 256 79 51 chr5 2984817 2987511 -200098021 - L1M4 LINE L1 -554 5866 3030 1737 178 3 0 chr5 2987511 2987797 -200097735 - AluJb SINE Alu -22 290 4 3644 256 79 51 chr5 2987797 2988065 -200097467 - L1M4 LINE L1 -3390 3030 2771 279 173 0 0 chr5 2988089 2988141 -200097391 - L1MB8 LINE L1 -12 6166 6115 1139 154 125 38 chr5 2988142 2988382 -200097150 - Tigger2 DNA MER2_type -173 2545 1 3464 171 75 8 chr5 2988382 2989131 -200096401 - L1MB7 LINE L1 -86 6098 5300 640 251 103 37 chr5 2989098 2989719 -200095813 - L1M4 LINE L1 -3602 2780 2144 * 3719 60 6 2 chr5 2989749 2990217 -200095315 - L1PA5 LINE L1 -7 6147 5678 21 82 0 0 chr5 2990319 2990368 -200095164 + AT_rich Low_complexity Low_complexity 1 49 0 593 294 55 14 chr5 2990430 2990705 -200094827 - L1M4 LINE L1 -4644 1740 1455 2201 120 0 0 chr5 2991449 2991749 -200093783 - AluSx SINE Alu -12 300 1 2086 123 7 13 chr5 2992507 2992808 -200092724 - AluSg SINE Alu -11 299 1 310 243 157 96 chr5 2993585 2993865 -200091667 - MLT1H LTR MaLR -2 547 251 389 231 0 66 chr5 2994180 2994271 -200091261 - L2 LINE L2 0 3313 3229 200 283 71 18 chr5 2995718 2995831 -200089701 - MIR3 SINE MIR -7 201 83 254 230 0 23 chr5 2996043 2996130 -200089402 + (CATA)n Simple_repeat Simple_repeat 2 86 0 451 262 21 35 chr5 2997392 2997533 -200087999 + MLT1I LTR MaLR 247 385 -24 493 273 83 46 chr5 2997712 2998484 -200087048 + L1MEc LINE L1 2131 2893 -3322 358 182 0 0 chr5 2998515 2998570 -200086962 + Tigger5 DNA MER2_type 1 55 -2268 318 173 13 53 chr5 2998539 2998614 -200086918 + Tigger5 DNA MER2_type 2251 2322 -1 * 238 198 40 69 chr5 2998631 2998732 -200086800 + L1MEc LINE L1 2924 3021 -3194 202 303 174 0 chr5 2998732 2998864 -200086668 - MIR SINE MIR -12 250 96 2686 33 0 3 chr5 2998952 2999259 -200086273 + AluY SINE Alu 1 306 -5 596 264 45 80 chr5 2999269 2999841 -200085691 + L1MEc LINE L1 3469 4020 -2195 35 24 0 0 chr5 2999844 2999886 -200085646 + AT_rich Low_complexity Low_complexity 1 42 0 591 245 54 0 chr5 2999927 3000074 -200085458 + MLT1D LTR MaLR 1 155 -350 976 211 18 22 chr5 3000141 3000364 -200085168 + MLT1D LTR MaLR 271 492 -13 1964 133 7 4 chr5 3000822 3001101 -200084431 + AluSq SINE Alu 1 280 -33 267 31 0 0 chr5 3001101 3001133 -200084399 + (CA)n Simple_repeat Simple_repeat 1 32 0 31 0 0 0 chr5 3001774 3001805 -200083727 + AT_rich Low_complexity Low_complexity 1 31 0 220 386 59 5 chr5 3002487 3002689 -200082843 + MIR SINE MIR 22 234 -28 235 225 33 42 chr5 3002740 3002860 -200082672 + (TATATG)n Simple_repeat Simple_repeat 6 124 0 237 268 28 0 chr5 3003076 3003147 -200082385 + CT-rich Low_complexity Low_complexity 3 75 0 2638 189 34 55 chr5 3003244 3003806 -200081726 - MER52A LTR ERV1 0 1755 1206 1286 227 88 65 chr5 3003779 3004268 -200081264 - MER52A LTR ERV1 -304 1349 531 * 307 264 172 0 chr5 3004292 3004379 -200081153 - MER52A LTR ERV1 -671 1084 983 518 219 233 7 chr5 3004396 3004542 -200080990 - MER52A LTR ERV1 -664 1091 913 3620 198 89 28 chr5 3004610 3005563 -200079969 - MER52A LTR ERV1 -658 1097 1 4138 149 17 8 chr5 3007099 3007804 -200077728 + MER50 LTR ERV1 1 711 -23 717 204 0 0 chr5 3008832 3008984 -200076548 + T-rich Low_complexity Low_complexity 1 152 0 2275 115 3 3 chr5 3008988 3009301 -200076231 - AluSq SINE Alu 0 313 1 22 0 0 0 chr5 3010564 3010586 -200074946 + AT_rich Low_complexity Low_complexity 1 22 0 180 0 0 0 chr5 3011735 3011755 -200073777 + (CCCCCT)n Simple_repeat Simple_repeat 2 21 0 641 244 0 0 chr5 3012492 3012668 -200072864 + (CTGGGG)n Simple_repeat Simple_repeat 5 180 0 615 241 0 0 chr5 3012735 3012909 -200072623 + (CTGGGG)n Simple_repeat Simple_repeat 3 176 0 584 258 0 0 chr5 3012929 3013107 -200072425 + (CTGGGG)n Simple_repeat Simple_repeat 3 180 0 569 274 6 0 chr5 3013119 3013471 -200072061 + (CTGGGG)n Simple_repeat Simple_repeat 1 354 0 1979 150 7 0 chr5 3014732 3015038 -200070494 - AluSx SINE Alu -4 308 1 28 61 0 0 chr5 3015785 3015834 -200069698 + AT_rich Low_complexity Low_complexity 1 49 0 1297 214 64 113 chr5 3017447 3017961 -200067571 - MLT1E LTR MaLR -4 589 75 2225 125 0 0 chr5 3018581 3018893 -200066639 - AluSx SINE Alu 0 312 1 284 307 83 43 chr5 3018946 3019200 -200066332 + L1MC/D LINE L1 5476 5739 -382 182 132 53 0 chr5 3019693 3019731 -200065801 + CT-rich Low_complexity Low_complexity 1 40 0 266 176 20 0 chr5 3021053 3021104 -200064428 + LTR30 LTR ERV1 1 52 -670 1253 91 37 118 chr5 3021104 3021368 -200064164 + LTR12 LTR ERV1 57 258 -456 305 291 26 0 chr5 3021368 3021485 -200064047 + LTR30 LTR ERV1 524 643 -79 2526 84 0 0 chr5 3021485 3021807 -200063725 + LTR12 LTR ERV1 377 698 -16 1223 177 101 122 chr5 3021811 3022246 -200063286 + MSTA LTR MaLR 3 428 0 533 249 80 127 chr5 3022943 3023345 -200062187 + MLT1C LTR MaLR 1 464 -3 203 256 0 44 chr5 3025454 3025544 -200059988 + (TA)n Simple_repeat Simple_repeat 2 87 0 213 121 0 0 chr5 3026400 3026433 -200059099 + (TAAAA)n Simple_repeat Simple_repeat 3 35 0 495 0 0 0 chr5 3028532 3028587 -200056945 + (TA)n Simple_repeat Simple_repeat 2 56 0 2149 111 0 0 chr5 3028586 3028887 -200056645 - AluSg SINE Alu 0 301 1 28 48 0 0 chr5 3029081 3029123 -200056409 + AT_rich Low_complexity Low_complexity 1 42 0 1673 182 88 45 chr5 3029382 3029849 -200055683 + MLT2B1 LTR ERVL 1 487 -33 1791 214 86 34 chr5 3031878 3032402 -200053130 + L1MB7 LINE L1 5634 6184 0 291 365 58 12 chr5 3032745 3032986 -200052546 + MIR SINE MIR 8 259 -3 264 363 7 15 chr5 3033930 3034065 -200051467 + MIR SINE MIR 84 217 -45 2069 112 22 0 chr5 3035556 3035832 -200049700 + AluSg SINE Alu 13 294 -16 3368 224 35 33 chr5 3036049 3036363 -200049169 - L1MB8 LINE L1 -7 6171 5859 2308 101 7 0 chr5 3036363 3036669 -200048863 - AluSx SINE Alu -2 310 3 3368 224 35 33 chr5 3036669 3037232 -200048300 - L1MB8 LINE L1 -319 5859 5298 1930 192 78 2 chr5 3037232 3037628 -200047904 + MSTB LTR MaLR 1 426 0 3368 224 35 33 chr5 3037628 3038163 -200047369 - L1MB8 LINE L1 -880 5298 4747 2472 71 0 7 chr5 3038163 3038473 -200047059 - AluY SINE Alu -3 308 1 3368 224 35 33 chr5 3038473 3038590 -200046942 - L1MB8 LINE L1 -1431 4747 4632 1852 64 0 0 chr5 3038690 3038943 -200046589 + AluY SINE Alu 67 319 0 32 43 0 0 chr5 3039142 3039188 -200046344 + AT_rich Low_complexity Low_complexity 1 46 0 1544 267 69 18 chr5 3039227 3039833 -200045699 + L1ME2 LINE L1 5291 5927 -237 4683 147 14 13 chr5 3039934 3040710 -200044822 - Tigger1 DNA MER2_type -1519 899 123 1111 128 24 0 chr5 3041355 3041519 -200044013 + AluSp SINE Alu 103 270 -43 276 77 0 0 chr5 3041522 3041561 -200043971 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 763 321 69 53 chr5 3041645 3042225 -200043307 - L1MC4a LINE L1 -1795 6013 5425 950 232 70 35 chr5 3042250 3042595 -200042937 + MER74B LTR ERVL 261 617 -5 953 236 16 64 chr5 3042598 3043047 -200042485 - L1MC4a LINE L1 -717 5449 5024 1082 156 0 118 chr5 3044634 3044871 -200040661 - AluJb SINE Alu -19 293 85 239 308 56 52 chr5 3047650 3047676 -200037856 + HAL1 LINE L1 2254 2278 -229 189 0 0 0 chr5 3047676 3047697 -200037835 + (TTAA)n Simple_repeat Simple_repeat 3 23 0 239 308 56 52 chr5 3047697 3047920 -200037612 + HAL1 LINE L1 2278 2504 -3 231 184 53 13 chr5 3047991 3048067 -200037465 + CT-rich Low_complexity Low_complexity 1 79 0 1122 209 17 120 chr5 3049391 3049798 -200035734 - MLT1A1 LTR MaLR 0 365 1 492 233 194 30 chr5 3049829 3050061 -200035471 + MER5C DNA MER1_type 55 324 0 22 0 0 0 chr5 3051176 3051198 -200034334 + AT_rich Low_complexity Low_complexity 1 22 0 363 276 155 0 chr5 3053532 3053648 -200031884 - MIR SINE MIR -11 251 118 208 329 44 44 chr5 3053622 3053759 -200031773 - MER91A DNA MER1_type -26 170 34 * 641 149 0 8 chr5 3056488 3056622 -200028910 + (TTCC)n Simple_repeat Simple_repeat 3 135 0 5358 155 21 25 chr5 3056718 3057827 -200027705 - L1MA7 LINE L1 0 6291 5188 4775 173 19 4 chr5 3057820 3058790 -200026742 + L1MA7 LINE L1 4202 5185 -961 * 1900 211 0 0 chr5 3062265 3062611 -200022921 - MER7A DNA MER2_type -1 345 2 2238 93 0 0 chr5 3062712 3062992 -200022540 + AluSx SINE Alu 33 312 0 297 0 0 0 chr5 3063277 3063310 -200022222 + (CA)n Simple_repeat Simple_repeat 2 34 0 25 0 0 0 chr5 3063622 3063647 -200021885 + AT_rich Low_complexity Low_complexity 1 25 0 208 298 18 0 chr5 3066548 3066605 -200018927 + CT-rich Low_complexity Low_complexity 6 63 0 696 309 75 10 chr5 3067215 3067510 -200018022 - L3 LINE CR1 -622 955 642 861 190 0 118 chr5 3068045 3068282 -200017250 - AluJb SINE Alu -19 293 85 180 0 0 0 chr5 3068684 3068704 -200016828 + (TCTG)n Simple_repeat Simple_repeat 3 22 0 288 0 0 0 chr5 3069955 3069987 -200015545 + (TG)n Simple_repeat Simple_repeat 2 33 0 2092 132 0 0 chr5 3072158 3072459 -200013073 - AluSg SINE Alu 0 301 1 304 216 72 72 chr5 3073452 3073577 -200011955 - L1MEd LINE L1 -5176 943 819 24 0 0 0 chr5 3074127 3074151 -200011381 + AT_rich Low_complexity Low_complexity 1 24 0 520 370 49 52 chr5 3074278 3074595 -200010937 + L1MC4a LINE L1 4296 4612 -1534 2277 60 32 11 chr5 3074595 3074879 -200010653 - AluY SINE Alu -21 290 1 520 370 49 52 chr5 3074879 3075433 -200010099 + L1MC4a LINE L1 4612 5165 -981 226 253 0 12 chr5 3075590 3075673 -200009859 + L1MC4a LINE L1 5316 5397 -962 816 228 140 40 chr5 3075870 3076308 -200009224 + MLT1D LTR MaLR 5 378 -12 320 250 40 92 chr5 3076586 3076738 -200008794 + L1MC4a LINE L1 6121 6264 -1544 353 277 64 58 chr5 3076824 3077012 -200008520 + L1ME4a LINE L1 5933 6121 0 23 33 0 0 chr5 3078290 3078320 -200007212 + AT_rich Low_complexity Low_complexity 1 30 0 201 119 24 24 chr5 3079879 3079921 -200005611 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 278 80 60 0 chr5 3079923 3079973 -200005559 - L1MA4 LINE L1 -5 6295 6243 3097 38 0 0 chr5 3080216 3080584 -200004948 - L1PA4 LINE L1 -3 6152 5785 256 242 39 70 chr5 3081596 3081724 -200003808 - LTR16C LTR ERVL -2 489 366 1051 39 0 0 chr5 3085089 3085217 -200000315 + L1PA4 LINE L1 6028 6155 0 587 207 40 8 chr5 3088792 3088940 -199996592 - MLT1C LTR MaLR 0 458 238 239 321 97 12 chr5 3089021 3089186 -199996346 - MLT1C LTR MaLR -322 183 5 1194 214 117 35 chr5 3090968 3091285 -199994247 + MER2 DNA MER2_type 1 343 -1 351 332 124 31 chr5 3091518 3091744 -199993788 - L3 LINE CR1 -1050 527 281 449 312 53 72 chr5 3091790 3092053 -199993479 - MIR SINE MIR -3 259 2 2472 85 0 0 chr5 3096713 3097008 -199988524 - AluSg SINE Alu -15 295 1 21 0 0 0 chr5 3097016 3097037 -199988495 + AT_rich Low_complexity Low_complexity 1 21 0 2219 84 19 22 chr5 3097637 3097948 -199987584 - AluSq SINE Alu -3 310 1 23 0 0 0 chr5 3097983 3098006 -199987526 + AT_rich Low_complexity Low_complexity 1 23 0 2204 133 0 0 chr5 3099162 3099462 -199986070 + AluSq SINE Alu 1 300 -13 595 257 60 6 chr5 3099644 3099827 -199985705 + MIR SINE MIR 67 259 -3 669 232 46 66 chr5 3100495 3100754 -199984778 - MLT1C LTR MaLR 0 467 214 1724 196 33 53 chr5 3100977 3101294 -199984238 + MER65A LTR ERV1 1 308 -137 6222 75 0 1 chr5 3101294 3102122 -199983410 + L1PA7 LINE L1 5346 6154 0 1724 196 33 53 chr5 3102122 3102258 -199983274 + MER65A LTR ERV1 308 445 0 1760 183 36 25 chr5 3103758 3104119 -199981413 - MLT1A1 LTR MaLR 0 365 1 2283 98 0 3 chr5 3104270 3104567 -199980965 + AluSg SINE Alu 1 296 -14 1606 155 66 7 chr5 3104715 3104986 -199980546 + AluJo SINE Alu 7 293 -19 1918 139 28 0 chr5 3107995 3108283 -199977249 - AluSx SINE Alu -16 296 1 228 196 0 20 chr5 3110049 3110100 -199975432 + (TTTA)n Simple_repeat Simple_repeat 1 50 0 2146 114 20 0 chr5 3110490 3110788 -199974744 + AluSx SINE Alu 1 304 -8 202 209 0 0 chr5 3110920 3110963 -199974569 + (CA)n Simple_repeat Simple_repeat 2 44 0 385 181 44 0 chr5 3114048 3114149 -199971383 + L1M4 LINE L1 1024 1275 -5271 24 53 0 0 chr5 3114222 3114260 -199971272 + AT_rich Low_complexity Low_complexity 1 38 0 399 277 80 40 chr5 3114344 3114568 -199970964 + L1ME LINE L1 5590 5822 -299 532 269 83 65 chr5 3114583 3115329 -199970203 + L1M4 LINE L1 1389 2360 -4465 4958 262 58 30 chr5 3115330 3116357 -199969175 + L1M4 LINE L1 2384 3381 -3263 1780 168 28 0 chr5 3116357 3116642 -199968890 - AluJb SINE Alu -18 294 2 4958 262 58 30 chr5 3116642 3117884 -199967648 + L1M4 LINE L1 3381 4686 -1958 2074 253 62 37 chr5 3118004 3119253 -199966279 + L1M4 LINE L1 4930 6222 -440 318 295 103 46 chr5 3119493 3119795 -199965737 + L1M4 LINE L1 2411 2729 -3653 453 194 136 99 chr5 3119979 3120221 -199965311 - MLT1F1 LTR MaLR -209 358 108 496 141 202 10 chr5 3120385 3120484 -199965048 - Tigger1 DNA MER2_type 0 2418 2301 900 181 66 6 chr5 3121680 3121862 -199963670 + MER58 DNA MER1_type 1 193 -148 2184 102 3 10 chr5 3121889 3122184 -199963348 + AluY SINE Alu 1 293 -18 7384 127 23 6 chr5 3122184 3123347 -199962185 - Tigger1 DNA MER2_type -109 2309 1127 1083 223 48 53 chr5 3123447 3123824 -199961708 + MLT1C LTR MaLR 77 451 -16 548 276 65 5 chr5 3124125 3124324 -199961208 - MLT1J LTR MaLR -246 265 55 1519 134 0 0 chr5 3124812 3125028 -199960504 - AluSg/x SINE Alu -1 311 96 236 324 76 34 chr5 3125246 3125508 -199960024 - L1ME LINE L1 -302 5819 5547 1245 204 106 23 chr5 3126602 3126950 -199958582 + MLT1B LTR MaLR 6 382 -8 548 232 132 32 chr5 3127487 3127707 -199957825 + MLT1C LTR MaLR 6 247 -220 1057 202 51 14 chr5 3128834 3129216 -199956316 - MLT1B LTR MaLR -38 352 2 2256 105 0 3 chr5 3129285 3129636 -199955896 + AluSg SINE Alu 1 350 0 1024 174 9 19 chr5 3130688 3130900 -199954632 + L1MA4 LINE L1 6091 6300 0 453 292 97 36 chr5 3130900 3131439 -199954093 + L1MC/D LINE L1 951 1504 -4625 29 47 0 0 chr5 3131665 3131708 -199953824 + AT_rich Low_complexity Low_complexity 1 43 0 297 323 143 37 chr5 3132165 3132470 -199953062 + L1MC/D LINE L1 3457 3818 -2311 2248 99 0 0 chr5 3132470 3132786 -199952746 - AluSx SINE Alu 0 318 3 297 323 143 37 chr5 3132786 3132885 -199952647 + L1MC/D LINE L1 3818 3905 -2224 * 686 252 38 24 chr5 3132872 3133082 -199952450 + L1MD3 LINE L1 7783 7995 0 455 291 166 32 chr5 3133079 3133519 -199952013 + HAL1 LINE L1 1553 2051 -456 * 21 0 0 0 chr5 3134114 3134135 -199951397 + AT_rich Low_complexity Low_complexity 1 21 0 425 308 74 8 chr5 3134244 3134504 -199951028 + L1MC/D LINE L1 5197 5471 -743 717 235 54 0 chr5 3134606 3134810 -199950722 - L1ME3 LINE L1 0 6162 5948 2347 248 64 90 chr5 3134943 3135105 -199950427 - L1ME3 LINE L1 -1127 5019 4854 406 159 16 0 chr5 3135105 3135198 -199950334 - AluJ/FRAM SINE Alu 0 314 221 2347 248 64 90 chr5 3135198 3136328 -199949204 - L1ME3 LINE L1 -1292 4854 3699 2374 244 74 53 chr5 3136348 3136595 -199948937 + L1M4 LINE L1 3797 4037 -2109 2065 119 0 14 chr5 3136595 3136930 -199948602 + AluSp SINE Alu 1 331 0 2374 244 74 53 chr5 3136930 3137780 -199947752 + L1M4 LINE L1 4037 4919 -1227 499 197 0 26 chr5 3137911 3138028 -199947504 + L1MB8 LINE L1 6064 6177 -1 1748 210 54 32 chr5 3138067 3139199 -199946333 - L1MC/D LINE L1 -608 5751 4618 210 342 13 0 chr5 3139334 3139413 -199946119 - L2 LINE L2 0 3272 3193 191 349 0 0 chr5 3139772 3139838 -199945694 - L2 LINE L2 0 3313 3248 1377 211 41 64 chr5 3140207 3140643 -199944889 - MSTB LTR MaLR 0 426 1 23 0 0 0 chr5 3142377 3142400 -199943132 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr5 3144693 3144722 -199940810 + GC_rich Low_complexity Low_complexity 1 29 0 297 237 8 42 chr5 3147758 3147937 -199937595 + G-rich Low_complexity Low_complexity 1 172 0 248 275 0 0 chr5 3148008 3148077 -199937455 + C-rich Low_complexity Low_complexity 2 70 0 200 111 28 0 chr5 3148277 3148313 -199937219 + (CCG)n Simple_repeat Simple_repeat 2 38 0 39 100 0 0 chr5 3148340 3148470 -199937062 + GC_rich Low_complexity Low_complexity 1 130 0 192 40 0 0 chr5 3148680 3148705 -199936827 + (CCG)n Simple_repeat Simple_repeat 1 25 0 21 0 0 0 chr5 3148800 3148821 -199936711 + GC_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr5 3148929 3148960 -199936572 + GC_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr5 3151068 3151096 -199934436 + GC_rich Low_complexity Low_complexity 1 28 0 21 0 0 0 chr5 3151130 3151151 -199934381 + GC_rich Low_complexity Low_complexity 1 21 0 28 61 0 0 chr5 3151213 3151262 -199934270 + GC_rich Low_complexity Low_complexity 1 49 0 27 0 0 0 chr5 3151545 3151572 -199933960 + GC_rich Low_complexity Low_complexity 1 27 0 359 164 0 16 chr5 3152557 3152618 -199932914 + L1MC4 LINE L1 6644 6703 -1339 208 162 27 0 chr5 3152619 3152656 -199932876 + (TATATG)n Simple_repeat Simple_repeat 6 43 0 198 0 0 0 chr5 3153120 3153142 -199932390 + (A)n Simple_repeat Simple_repeat 1 22 0 450 0 0 0 chr5 3155768 3155818 -199929714 + (CA)n Simple_repeat Simple_repeat 2 51 0 21 57 0 0 chr5 3156338 3156373 -199929159 + GC_rich Low_complexity Low_complexity 1 35 0 23 54 0 0 chr5 3156502 3156539 -199928993 + GC_rich Low_complexity Low_complexity 1 37 0 26 50 0 0 chr5 3157262 3157302 -199928230 + AT_rich Low_complexity Low_complexity 1 40 0 1024 225 61 58 chr5 3162876 3163529 -199922003 - Zaphod DNA AcHobo -20 4011 736 921 140 136 9 chr5 3164238 3164459 -199921073 - L1MC2 LINE L1 0 6344 6096 259 224 0 15 chr5 3164652 3164719 -199920813 - MER53 DNA DNA -120 69 4 1628 180 27 24 chr5 3168780 3169074 -199916458 - AluJo SINE Alu -13 299 5 219 148 16 33 chr5 3170108 3170169 -199915363 + (TCTA)n Simple_repeat Simple_repeat 4 63 0 336 48 0 0 chr5 3170441 3170483 -199915049 + (CA)n Simple_repeat Simple_repeat 2 43 0 211 358 100 0 chr5 3171085 3171205 -199914327 + L2 LINE L2 3133 3264 -8 209 289 107 71 chr5 3172197 3172394 -199913138 - MIR SINE MIR -45 217 14 28 0 0 0 chr5 3173096 3173124 -199912408 + AT_rich Low_complexity Low_complexity 1 28 0 1953 131 0 38 chr5 3176115 3176405 -199909127 + AluSx SINE Alu 1 279 -33 210 71 0 0 chr5 3176407 3176435 -199909097 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 23 0 0 0 chr5 3177280 3177303 -199908229 + AT_rich Low_complexity Low_complexity 1 23 0 1471 157 80 44 chr5 3181827 3181981 -199903551 - THE1C LTR MaLR -12 416 269 288 0 0 0 chr5 3181981 3182013 -199903519 + (GA)n Simple_repeat Simple_repeat 1 32 0 1471 157 80 44 chr5 3182013 3182186 -199903346 - THE1C LTR MaLR -159 269 9 315 83 0 21 chr5 3182186 3182234 -199903298 - THE1B LTR MaLR -317 47 1 500 266 137 78 chr5 3182303 3182724 -199902808 - MLT1D LTR MaLR -2 465 27 238 286 12 12 chr5 3182860 3182944 -199902588 + CT-rich Low_complexity Low_complexity 4 87 0 801 236 34 0 chr5 3183443 3183621 -199901911 - MLT1G LTR MaLR -13 577 394 1572 216 18 9 chr5 3183621 3183955 -199901577 + MLT2C1 LTR ERVL 1 337 -60 453 153 201 49 chr5 3183955 3184099 -199901433 - MER4A LTR ERV1 0 465 300 1916 125 38 60 chr5 3184139 3184524 -199901008 - MER4A LTR ERV1 -240 357 2 271 242 15 0 chr5 3184776 3184842 -199900690 - MLT1G LTR MaLR -57 533 467 * 371 337 28 17 chr5 3184838 3185019 -199900513 - MLT1G LTR MaLR -407 183 1 26 0 0 0 chr5 3185527 3185553 -199899979 + AT_rich Low_complexity Low_complexity 1 26 0 627 308 97 21 chr5 3186391 3186898 -199898634 - MLT1G LTR MaLR 0 590 18 216 0 0 0 chr5 3186996 3187020 -199898512 + (TCCA)n Simple_repeat Simple_repeat 2 25 0 3037 155 28 6 chr5 3187353 3187856 -199897676 - MER1A DNA MER1_type 0 529 16 189 147 0 0 chr5 3187981 3188015 -199897517 + (TCCC)n Simple_repeat Simple_repeat 2 35 0 260 369 92 18 chr5 3188018 3188346 -199897186 + L2 LINE L2 2916 3267 -5 1926 179 0 3 chr5 3188626 3188939 -199896593 + AluSx SINE Alu 1 312 0 358 302 43 2 chr5 3189569 3189703 -199895829 - MIR SINE MIR -46 162 34 223 49 49 0 chr5 3241237 3241278 -199844254 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 471 219 0 0 chr5 3242025 3242203 -199843329 + (TG)n Simple_repeat Simple_repeat 2 179 0 404 236 6 0 chr5 3242249 3242427 -199843105 + (TG)n Simple_repeat Simple_repeat 1 179 0 362 214 7 0 chr5 3242462 3242607 -199842925 + (TG)n Simple_repeat Simple_repeat 2 147 0 312 302 82 60 chr5 3244102 3244334 -199841198 - L1M4 LINE L1 -813 5333 5097 903 190 6 0 chr5 3244413 3244587 -199840945 - FRAM SINE Alu -7 169 1 22 0 0 0 chr5 3246215 3246237 -199839295 + AT_rich Low_complexity Low_complexity 1 22 0 2116 110 3 13 chr5 3246361 3246670 -199838862 + AluSx SINE Alu 1 306 -6 212 197 0 33 chr5 3247907 3247968 -199837564 + GA-rich Low_complexity Low_complexity 3 61 0 1920 163 10 7 chr5 3248454 3248760 -199836772 + AluJb SINE Alu 6 312 0 2331 87 3 13 chr5 3250023 3250335 -199835197 - AluY SINE Alu -2 309 1 2113 131 0 0 chr5 3251596 3251922 -199833610 + AluSx SINE Alu 1 326 0 181 286 0 54 chr5 3254952 3255008 -199830524 + MIR SINE MIR 95 145 -63 204 200 0 0 chr5 3255579 3255614 -199829918 - L3 LINE CR1 -994 583 549 27 0 0 0 chr5 3256526 3256553 -199828979 + AT_rich Low_complexity Low_complexity 1 27 0 285 309 51 86 chr5 3257125 3257520 -199828012 + MLT1I LTR MaLR 20 400 -9 182 150 25 0 chr5 3259649 3259689 -199825843 + (TA)n Simple_repeat Simple_repeat 1 41 0 2262 134 10 21 chr5 3259700 3260089 -199825443 + L1PA16 LINE L1 5524 5908 -258 183 80 0 0 chr5 3260089 3260114 -199825418 + (TATATG)n Simple_repeat Simple_repeat 3 27 0 960 36 61 0 chr5 3260767 3260932 -199824600 + (TCTA)n Simple_repeat Simple_repeat 3 177 0 336 393 23 40 chr5 3261368 3261486 -199824046 + L1MC4a LINE L1 5548 5666 -2142 6921 75 6 0 chr5 3261486 3262580 -199822952 + L1PA8 LINE L1 5090 6193 0 336 393 23 40 chr5 3262580 3262814 -199822718 + L1MC4a LINE L1 5666 5895 -1913 304 318 90 42 chr5 3263982 3264171 -199821361 + L1MDa LINE L1 2441 2638 -3902 271 308 91 23 chr5 3264529 3264750 -199820782 - MER106A DNA MER1_type 0 236 1 3565 190 11 22 chr5 3264807 3265439 -199820093 - MER72 LTR ERV1 0 722 98 2216 114 3 19 chr5 3265439 3265756 -199819776 - AluSx SINE Alu 0 312 1 3565 190 11 22 chr5 3265756 3265853 -199819679 - MER72 LTR ERV1 -624 98 1 182 341 11 0 chr5 3267878 3267966 -199817566 - L2 LINE L2 -836 2478 2390 291 114 0 0 chr5 3271922 3271966 -199813566 + (CA)n Simple_repeat Simple_repeat 1 44 0 244 346 57 0 chr5 3275026 3275155 -199810377 - MIR SINE MIR -77 131 16 2193 114 3 7 chr5 3275214 3275520 -199810012 + AluSc SINE Alu 5 309 0 437 279 33 0 chr5 3276980 3277102 -199808430 - MER63 DNA MER1_type -279 783 32 2286 110 0 3 chr5 3281571 3281870 -199803662 - AluY SINE Alu -13 298 1 2059 141 3 0 chr5 3282080 3282378 -199803154 + AluSx SINE Alu 1 299 -13 330 274 109 95 chr5 3282682 3283094 -199802438 - L2 LINE L2 -31 3241 2824 280 302 113 22 chr5 3286093 3286368 -199799164 - LTR16A1 LTR ERVL -2 455 156 243 250 0 0 chr5 3288097 3288157 -199797375 + (CA)n Simple_repeat Simple_repeat 2 61 0 291 247 28 22 chr5 3288399 3288577 -199796955 + (TA)n Simple_repeat Simple_repeat 2 180 0 360 276 57 9 chr5 3288956 3289061 -199796471 + L2 LINE L2 3203 3312 -1 290 279 7 57 chr5 3291996 3292136 -199793396 + MER115 DNA AcHobo 505 637 -56 2138 125 7 0 chr5 3293199 3293496 -199792036 - AluSx SINE Alu -13 299 1 2367 100 0 6 chr5 3293686 3294015 -199791517 + L1PA8A LINE L1 5798 6124 -7 181 268 73 49 chr5 3295241 3295323 -199790209 + MIR SINE MIR 65 148 -114 447 289 112 27 chr5 3295552 3295739 -199789793 - MIR SINE MIR 0 262 60 300 0 0 0 chr5 3296285 3296321 -199789211 + L1PA6 LINE L1 6111 6146 -8 845 209 81 0 chr5 3296337 3296548 -199788984 - MLT2C2 LTR ERVL -236 228 1 193 316 168 11 chr5 3297189 3297284 -199788248 + MER5A DNA MER1_type 10 119 -70 612 268 166 50 chr5 3297374 3297777 -199787755 + MLT1F LTR MaLR 85 534 -8 363 319 137 28 chr5 3297902 3298259 -199787273 + L2 LINE L2 2576 2971 -343 188 384 0 27 chr5 3298299 3298411 -199787121 + L2 LINE L2 3168 3276 -37 2216 92 13 10 chr5 3298588 3298893 -199786639 - AluSc SINE Alu -3 306 1 560 273 136 10 chr5 3299102 3299300 -199786232 + MER58A DNA MER1_type 1 223 -1 188 229 62 0 chr5 3301014 3301062 -199784470 + L2 LINE L2 3222 3272 0 302 276 133 0 chr5 3302495 3302600 -199782932 + L1M4 LINE L1 3039 3157 -2989 * 414 276 115 0 chr5 3302594 3302750 -199782782 + L1M4 LINE L1 3081 3254 -2892 538 266 101 38 chr5 3302850 3303117 -199782415 + L1M4 LINE L1 3579 3862 -2284 229 300 12 0 chr5 3303809 3303889 -199781643 + (TA)n Simple_repeat Simple_repeat 2 82 0 998 254 71 97 chr5 3306063 3307328 -199778204 - L1ME LINE L1 -4602 1659 371 427 341 101 23 chr5 3307522 3308088 -199777444 - L1 LINE L1 -2285 3861 3252 2828 16 0 0 chr5 3308248 3308552 -199776980 - AluYb8 SINE Alu -14 304 1 21 0 0 0 chr5 3308723 3308744 -199776788 + AT_rich Low_complexity Low_complexity 1 21 0 323 325 122 27 chr5 3308850 3309398 -199776134 - L1 LINE L1 -3381 2765 2166 384 338 55 55 chr5 3309954 3310297 -199775235 - HAL1b LINE L1 -710 638 296 1841 113 7 25 chr5 3310428 3310703 -199774829 - AluSq SINE Alu -39 274 5 284 284 61 34 chr5 3311406 3311554 -199773978 + L1ME LINE L1 5533 5684 -437 35 0 0 0 chr5 3311595 3311630 -199773902 + AT_rich Low_complexity Low_complexity 1 35 0 329 272 22 0 chr5 3311857 3311949 -199773583 - L1MC4 LINE L1 -1338 6704 6611 440 205 6 0 chr5 3312625 3312781 -199772751 + (TG)n Simple_repeat Simple_repeat 1 157 0 486 213 0 0 chr5 3312794 3312954 -199772578 + (TG)n Simple_repeat Simple_repeat 2 161 0 294 222 81 0 chr5 3312957 3313056 -199772476 + (TCTG)n Simple_repeat Simple_repeat 4 110 0 566 188 0 6 chr5 3313061 3313242 -199772290 + (TG)n Simple_repeat Simple_repeat 1 180 0 342 249 0 0 chr5 3313266 3313439 -199772093 + (TG)n Simple_repeat Simple_repeat 2 174 0 385 152 22 43 chr5 3314155 3314339 -199771193 + (CA)n Simple_repeat Simple_repeat 1 180 0 210 306 45 18 chr5 3316807 3316918 -199768614 + MER5A DNA MER1_type 1 114 -75 2369 95 0 0 chr5 3316984 3317290 -199768242 - AluSx SINE Alu -6 306 1 405 39 0 0 chr5 3317979 3318030 -199767502 + (TC)n Simple_repeat Simple_repeat 2 52 0 926 301 36 40 chr5 3319657 3320106 -199765426 - MLT1E3 LTR MaLR -12 612 166 717 207 4 0 chr5 3321772 3322042 -199763490 + (TCCA)n Simple_repeat Simple_repeat 1 271 0 1622 272 42 27 chr5 3323995 3324542 -199760990 + MLT1H1 LTR MaLR 1 555 0 287 248 91 16 chr5 3324733 3324854 -199760678 + MIR SINE MIR 85 214 -48 1385 142 0 0 chr5 3324900 3325097 -199760435 - AluSc SINE Alu -16 293 97 5603 87 1 20 chr5 3325904 3326713 -199758819 + L1PA8A LINE L1 5331 6124 -7 504 48 0 0 chr5 3327896 3327959 -199757573 + (GAAA)n Simple_repeat Simple_repeat 2 64 0 1170 117 0 0 chr5 3327959 3328138 -199757394 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 763 133 7 14 chr5 3328143 3328286 -199757246 + (GAAA)n Simple_repeat Simple_repeat 2 143 0 378 42 0 0 chr5 3328563 3328611 -199756921 + (CA)n Simple_repeat Simple_repeat 2 49 0 396 167 0 0 chr5 3330210 3330282 -199755250 + (TG)n Simple_repeat Simple_repeat 1 72 0 1472 201 30 0 chr5 3332129 3332433 -199753099 - MLT1B LTR MaLR -7 383 71 482 151 28 38 chr5 3332457 3332563 -199752969 - MLT1B LTR MaLR -272 118 14 342 204 39 107 chr5 3334131 3334234 -199751298 - L1ME1 LINE L1 0 6444 6349 1831 270 54 22 chr5 3334316 3336657 -199748875 - L1ME1 LINE L1 -77 6369 3561 231 184 20 0 chr5 3336656 3336705 -199748827 + L1MCc LINE L1 823 872 -5551 * 220 327 98 19 chr5 3337642 3337725 -199747807 - MIR SINE MIR -40 222 147 192 77 0 0 chr5 3337725 3337751 -199747781 + (CAAAA)n Simple_repeat Simple_repeat 3 28 0 220 327 98 19 chr5 3337751 3337872 -199747660 - MIR SINE MIR -115 147 2 313 319 55 40 chr5 3339821 3340094 -199745438 - L1ME1 LINE L1 -3518 2908 2632 278 319 85 11 chr5 3340179 3340367 -199745165 + LTR33 LTR ERVL 15 216 -305 2015 152 3 0 chr5 3340590 3340887 -199744645 - AluJb SINE Alu -14 298 1 359 306 126 0 chr5 3341072 3341278 -199744254 - L1ME1 LINE L1 -3981 2445 2214 2035 137 3 0 chr5 3342248 3342540 -199742992 + AluSq SINE Alu 1 293 -20 3580 65 9 2 chr5 3342877 3343338 -199742194 - L1PA8 LINE L1 -1 6171 5708 295 237 50 101 chr5 3346160 3346299 -199739233 + LTR33A LTR ERVL 61 192 -331 2371 32 43 11 chr5 3347665 3347975 -199737557 - AluY SINE Alu 0 311 3 249 108 0 0 chr5 3349520 3349557 -199735975 + (A)n Simple_repeat Simple_repeat 1 37 0 358 211 62 62 chr5 3350783 3350911 -199734621 - L1ME4a LINE L1 0 6121 5994 460 353 56 71 chr5 3353831 3354635 -199730897 + L1ME2 LINE L1 376 1167 -5554 373 251 74 82 chr5 3354734 3355124 -199730408 + L1ME2 LINE L1 1262 1648 -4892 246 222 0 0 chr5 3355154 3355208 -199730324 + GA-rich Low_complexity Low_complexity 1 54 0 253 262 84 61 chr5 3355215 3355478 -199730054 + L1ME2 LINE L1 1675 1943 -4597 306 299 11 92 chr5 3355562 3355736 -199729796 + L1ME2 LINE L1 2019 2178 -4362 302 256 78 11 chr5 3355904 3355994 -199729538 + L1ME2 LINE L1 2345 2440 -4281 421 293 58 10 chr5 3355996 3356328 -199729204 + L1ME2 LINE L1 2399 2749 -3791 796 172 55 43 chr5 3356367 3356530 -199729002 + FRAM SINE Alu 1 156 -20 367 235 10 10 chr5 3356530 3356628 -199728904 + L1ME2 LINE L1 5564 5661 -879 227 237 23 8 chr5 3356631 3356762 -199728770 + (TA)n Simple_repeat Simple_repeat 2 134 0 2085 288 51 22 chr5 3356771 3357610 -199727922 + L1ME2 LINE L1 5683 6549 -9 363 223 157 16 chr5 3359180 3359301 -199726231 - L2 LINE L2 0 3313 3176 301 270 92 58 chr5 3359437 3359934 -199725598 - MLT1F LTR MaLR -90 452 2 408 245 90 58 chr5 3360005 3360160 -199725372 - MIR SINE MIR -17 245 86 195 280 118 11 chr5 3362068 3362161 -199723371 - L2 LINE L2 -145 3127 3025 1683 125 131 41 chr5 3362860 3363204 -199722328 + THE1C LTR MaLR 1 375 0 1682 195 13 10 chr5 3364003 3364311 -199721221 - AluJb SINE Alu -3 309 1 449 289 84 4 chr5 3365340 3365589 -199719943 - Charlie5 DNA MER1_type 0 2620 2352 448 246 27 77 chr5 3365588 3365771 -199719761 - Charlie5 DNA MER1_type -2413 199 26 * 194 180 0 60 chr5 3367066 3367166 -199718366 + (CA)n Simple_repeat Simple_repeat 1 94 0 433 257 6 39 chr5 3367231 3367410 -199718122 + (CA)n Simple_repeat Simple_repeat 1 173 0 336 272 16 38 chr5 3367583 3367767 -199717765 + (CA)n Simple_repeat Simple_repeat 1 180 0 315 256 0 0 chr5 3368666 3368756 -199716776 + (TGGA)n Simple_repeat Simple_repeat 4 93 0 932 183 7 0 chr5 3368772 3369068 -199716464 + (TGGA)n Simple_repeat Simple_repeat 1 298 0 180 176 0 0 chr5 3369086 3369120 -199716412 + (TAGA)n Simple_repeat Simple_repeat 4 37 0 809 185 6 0 chr5 3369140 3369313 -199716219 + (TAGA)n Simple_repeat Simple_repeat 3 176 0 351 0 0 0 chr5 3369631 3369670 -199715862 + (TG)n Simple_repeat Simple_repeat 2 40 0 702 187 49 76 chr5 3372569 3372794 -199712738 + MER20 DNA MER1_type 1 219 0 188 326 167 0 chr5 3372973 3373105 -199712427 + MIR SINE MIR 103 256 -6 302 123 37 25 chr5 3373215 3373296 -199712236 + (TCTA)n Simple_repeat Simple_repeat 4 85 0 1520 225 77 64 chr5 3374347 3374813 -199710719 + MLT1H1 LTR MaLR 16 491 -64 2080 135 14 0 chr5 3374813 3375109 -199710423 - AluSx SINE Alu -12 300 1 1520 225 77 64 chr5 3375109 3375175 -199710357 + MLT1H1 LTR MaLR 491 555 0 363 318 19 7 chr5 3375319 3375473 -199710059 + MER112 DNA MER1_type 97 252 -8 407 213 7 0 chr5 3376732 3376873 -199708659 + (TG)n Simple_repeat Simple_repeat 1 142 0 759 176 0 2 chr5 3376890 3377494 -199708038 + (TG)n Simple_repeat Simple_repeat 1 602 0 701 175 4 0 chr5 3377507 3377765 -199707767 + (TG)n Simple_repeat Simple_repeat 1 259 0 194 365 73 10 chr5 3380382 3380478 -199705054 - MIR SINE MIR -159 103 2 5294 168 21 10 chr5 3380705 3381738 -199703794 - L1MA6 LINE L1 0 6300 5256 443 266 35 53 chr5 3381738 3381907 -199703625 + MER5B DNA MER1_type 8 173 -5 1946 193 29 60 chr5 3381983 3382180 -199703352 + MER82 DNA MER2_type 1 203 -450 2125 160 30 0 chr5 3382180 3382518 -199703014 + MER7A DNA MER2_type 1 346 0 1946 193 29 60 chr5 3382518 3382801 -199702731 + MER82 DNA MER2_type 203 466 -187 698 211 18 4 chr5 3382839 3383307 -199702225 + (CA)n Simple_repeat Simple_repeat 1 474 0 587 159 34 28 chr5 3383290 3383466 -199702066 + (CATA)n Simple_repeat Simple_repeat 2 178 0 * 642 274 93 13 chr5 3384162 3384472 -199701060 + MER93b LTR ERV1 39 373 0 1638 195 139 0 chr5 3386369 3386743 -199698789 - MSTA LTR MaLR -2 426 1 2275 80 35 0 chr5 3387134 3387421 -199698111 + AluSp SINE Alu 1 297 -16 2210 119 13 0 chr5 3388539 3388842 -199696690 + AluSx SINE Alu 1 307 -5 541 239 16 38 chr5 3390728 3390912 -199694620 + L1MA10 LINE L1 6108 6287 -47 1432 229 38 15 chr5 3394138 3394478 -199691054 + MER7A DNA MER2_type 1 346 0 360 298 44 73 chr5 3394547 3394766 -199690766 - MIR SINE MIR -34 228 19 423 0 0 0 chr5 3394978 3395025 -199690507 + (TG)n Simple_repeat Simple_repeat 2 48 0 32 43 0 0 chr5 3395330 3395376 -199690156 + AT_rich Low_complexity Low_complexity 1 46 0 316 57 0 38 chr5 3396157 3396210 -199689322 + (TCCCG)n Simple_repeat Simple_repeat 3 53 0 591 127 25 0 chr5 3396233 3396351 -199689181 + CT-rich Low_complexity Low_complexity 3 123 0 1645 100 8 34 chr5 3396359 3396598 -199688934 - AluSg/x SINE Alu -6 306 74 581 185 0 22 chr5 3396959 3397143 -199688389 + CT-rich Low_complexity Low_complexity 1 180 0 228 294 0 0 chr5 3397807 3397926 -199687606 + (CA)n Simple_repeat Simple_repeat 1 119 0 195 299 28 47 chr5 3397973 3398080 -199687452 + L2 LINE L2 1831 1935 -1379 343 247 0 0 chr5 3399060 3399141 -199686391 - MLT1D LTR MaLR 0 505 425 196 222 97 28 chr5 3399267 3399339 -199686193 - MIR SINE MIR -97 165 89 852 203 0 0 chr5 3399394 3399735 -199685797 + (TGGA)n Simple_repeat Simple_repeat 1 341 0 765 194 0 0 chr5 3399755 3399925 -199685607 + (TGGA)n Simple_repeat Simple_repeat 1 170 0 902 181 0 3 chr5 3399943 3400308 -199685224 + (TGGA)n Simple_repeat Simple_repeat 1 363 0 1146 188 0 0 chr5 3400328 3400675 -199684857 + (TGGA)n Simple_repeat Simple_repeat 1 347 0 214 280 40 0 chr5 3401378 3401428 -199684104 + MER5B DNA MER1_type 125 176 -2 2372 81 0 0 chr5 3401520 3401830 -199683702 - AluY SINE Alu -1 310 1 324 284 193 25 chr5 3403522 3403765 -199681767 - L2 LINE L2 -1242 2072 1789 228 309 118 58 chr5 3404191 3404537 -199680995 - L2 LINE L2 -1758 1556 1190 221 273 191 22 chr5 3404613 3404844 -199680688 - L2 LINE L2 -2311 1003 734 1990 122 0 0 chr5 3406713 3407000 -199678532 + AluSx SINE Alu 11 297 -15 1771 147 0 10 chr5 3407367 3407660 -199677872 + AluJb SINE Alu 1 290 -22 2492 110 31 8 chr5 3409148 3409504 -199676028 - THE1B LTR MaLR 0 364 1 1071 224 113 36 chr5 3409577 3409912 -199675620 - MLT1A1 LTR MaLR -2 363 3 403 253 121 91 chr5 3410197 3410537 -199674995 - MLT1I LTR MaLR 0 409 60 226 271 17 0 chr5 3410644 3410703 -199674829 - MIR SINE MIR -171 91 32 1713 191 34 8 chr5 3413052 3413408 -199672124 + MLT1A1 LTR MaLR 1 365 0 303 298 116 56 chr5 3413597 3413795 -199671737 + L1M4 LINE L1 3770 3979 -2167 266 288 34 20 chr5 3413927 3414073 -199671459 + L1M4 LINE L1 4128 4275 -1871 27 29 0 0 chr5 3414634 3414668 -199670864 + AT_rich Low_complexity Low_complexity 1 34 0 1113 163 128 0 chr5 3414677 3414935 -199670597 - MER33 DNA MER1_type -1 323 33 475 327 24 6 chr5 3415374 3415542 -199669990 + MIR SINE MIR 46 216 -46 250 250 0 0 chr5 3416756 3416812 -199668720 + (CA)n Simple_repeat Simple_repeat 2 57 0 21 82 0 0 chr5 3417379 3417428 -199668104 + AT_rich Low_complexity Low_complexity 1 49 0 1186 239 34 34 chr5 3417578 3417934 -199667598 - MLT1A2 LTR MaLR 0 374 19 23 0 0 0 chr5 3419560 3419583 -199665949 + AT_rich Low_complexity Low_complexity 1 23 0 189 0 0 0 chr5 3419991 3420012 -199665520 + (TAA)n Simple_repeat Simple_repeat 2 22 0 407 306 19 19 chr5 3420014 3420171 -199665361 - MIR SINE MIR -11 251 95 297 276 14 55 chr5 3420306 3420451 -199665081 + (CATG)n Simple_repeat Simple_repeat 1 139 0 214 406 6 6 chr5 3420513 3420688 -199664844 + (CA)n Simple_repeat Simple_repeat 1 175 0 22 0 0 0 chr5 3421911 3421933 -199663599 + AT_rich Low_complexity Low_complexity 1 22 0 950 180 6 0 chr5 3422003 3422195 -199663337 - AluSx SINE Alu 0 313 121 568 176 0 0 chr5 3422231 3422322 -199663210 - AluSx SINE Alu -180 133 43 261 358 84 28 chr5 3425135 3425314 -199660218 + L3 LINE CR1 1246 1434 -143 897 211 40 44 chr5 3425636 3425863 -199659669 - ORSL DNA AcHobo -14 261 36 331 307 35 9 chr5 3427117 3427231 -199658301 - L1M4 LINE L1 -846 5798 5682 533 267 87 46 chr5 3427267 3427353 -199658179 - L1MEc LINE L1 -1784 4860 4779 1828 163 0 0 chr5 3427353 3427653 -199657879 - AluSx SINE Alu -12 300 1 533 267 87 46 chr5 3427653 3427761 -199657771 - L1MEc LINE L1 -1865 4779 4658 319 295 27 54 chr5 3427793 3428129 -199657403 - L1MEc LINE L1 -2063 4581 4255 619 244 93 136 chr5 3428135 3428396 -199657136 - L1MEc LINE L1 -2610 4034 3764 222 37 0 0 chr5 3428396 3428423 -199657109 + (TC)n Simple_repeat Simple_repeat 2 28 0 619 244 93 136 chr5 3428423 3428783 -199656749 - L1MEc LINE L1 -2880 3764 3472 4313 56 9 0 chr5 3428783 3429321 -199656211 + L1PA5 LINE L1 5612 6154 0 619 244 93 136 chr5 3429321 3429746 -199655786 - L1MEc LINE L1 -3172 3472 3031 1834 138 17 3 chr5 3429746 3430035 -199655497 + AluSq SINE Alu 1 293 -20 857 232 103 21 chr5 3430141 3430520 -199655012 - L1MEc LINE L1 -3940 2706 2297 1226 198 154 31 chr5 3430636 3430954 -199654578 - MLT1A1 LTR MaLR 0 365 9 357 144 36 18 chr5 3430954 3431065 -199654467 + (TA)n Simple_repeat Simple_repeat 2 114 0 5172 249 46 36 chr5 3431065 3433115 -199652417 - L1M4 LINE L1 -4565 2081 5 242 264 100 27 chr5 3433133 3433243 -199652289 - L1MEc LINE L1 -4766 2059 1942 284 298 53 11 chr5 3433389 3433483 -199652049 + MER20B DNA MER1_type 62 159 -624 2105 111 0 0 chr5 3435624 3435922 -199649610 + AluSg SINE Alu 1 298 -12 295 245 11 21 chr5 3437386 3437480 -199648052 + CT-rich Low_complexity Low_complexity 2 94 0 1085 239 77 11 chr5 3438749 3439100 -199646432 + MLT1A2 LTR MaLR 1 374 0 623 254 172 67 chr5 3439226 3439674 -199645858 - L1ME4a LINE L1 -6 6115 5621 2258 92 7 0 chr5 3441753 3442059 -199643473 - AluY SINE Alu -3 308 1 407 348 13 25 chr5 3442191 3442349 -199643183 - MIR SINE MIR -52 210 55 677 251 67 5 chr5 3442394 3442589 -199642943 - MER20 DNA MER1_type -5 214 8 187 255 0 43 chr5 3442876 3442923 -199642609 + L3 LINE CR1 642 686 -891 2506 96 19 25 chr5 3443342 3443708 -199641824 + THE1B LTR MaLR 1 364 0 253 260 53 60 chr5 3444012 3444162 -199641370 - MIR SINE MIR -54 208 60 27 0 0 0 chr5 3445807 3445834 -199639698 + AT_rich Low_complexity Low_complexity 1 27 0 1260 206 29 29 chr5 3450054 3450399 -199635133 - MLT1C LTR MaLR -42 425 81 243 269 0 0 chr5 3450573 3450703 -199634829 + (CA)n Simple_repeat Simple_repeat 1 130 0 183 184 0 0 chr5 3450721 3450759 -199634773 + (CATATA)n Simple_repeat Simple_repeat 2 39 0 * 282 292 0 0 chr5 3450732 3450910 -199634622 + (CA)n Simple_repeat Simple_repeat 1 178 0 435 38 0 0 chr5 3452161 3452214 -199633318 + (TG)n Simple_repeat Simple_repeat 2 54 0 237 33 0 0 chr5 3454285 3454315 -199631217 + (CA)n Simple_repeat Simple_repeat 1 30 0 285 81 0 0 chr5 3455579 3455616 -199629916 - tRNA-Gly-GGA tRNA tRNA -38 37 1 720 176 0 2 chr5 3456033 3456639 -199628893 + (TG)n Simple_repeat Simple_repeat 1 604 0 725 150 0 6 chr5 3456658 3456825 -199628707 + (TG)n Simple_repeat Simple_repeat 2 167 0 328 267 19 0 chr5 3457631 3457736 -199627796 - L2 LINE L2 -8 3305 3199 30 27 0 0 chr5 3457819 3457856 -199627676 + AT_rich Low_complexity Low_complexity 1 37 0 21 36 0 0 chr5 3458095 3458123 -199627409 + AT_rich Low_complexity Low_complexity 1 28 0 278 213 16 16 chr5 3458372 3458433 -199627099 + MER81 DNA DNA 54 114 0 238 327 89 12 chr5 3458822 3459070 -199626462 + L1M4 LINE L1 4949 5215 -931 1010 209 87 0 chr5 3459602 3459798 -199625734 + MER58A DNA MER1_type 1 213 -11 1881 194 65 7 chr5 3460494 3460897 -199624635 + MER95 LTR ERV 6 431 0 412 283 62 24 chr5 3461086 3461480 -199624052 - LTR16A LTR ERVL -1 449 2 2138 138 0 0 chr5 3462102 3462400 -199623132 + AluSx SINE Alu 1 298 -14 247 241 0 0 chr5 3462592 3462646 -199622886 - L1M4 LINE L1 -1324 4822 4769 2220 95 20 10 chr5 3464098 3464394 -199621138 + AluSq SINE Alu 1 299 -14 2522 61 0 26 chr5 3464416 3464727 -199620805 - AluY SINE Alu -7 304 2 192 135 0 0 chr5 3464879 3464916 -199620616 + (TG)n Simple_repeat Simple_repeat 1 37 0 214 378 33 0 chr5 3465034 3465185 -199620347 - L3 LINE CR1 -864 713 558 2379 73 7 3 chr5 3466028 3466328 -199619204 + AluY SINE Alu 1 301 -10 1117 243 49 27 chr5 3467796 3468163 -199617369 - MER96B DNA MER1_type? -4 413 39 435 240 21 0 chr5 3468163 3468259 -199617273 + MLT1C LTR MaLR 1 98 -369 2103 197 47 11 chr5 3468259 3468731 -199616801 + L1MA6 LINE L1 5483 5971 -329 258 81 0 0 chr5 3469361 3469398 -199616134 + (TG)n Simple_repeat Simple_repeat 2 38 0 1417 225 38 3 chr5 3472847 3473194 -199612338 - L1MB4 LINE L1 -1 6179 5821 848 169 6 0 chr5 3474211 3474389 -199611143 + (ATG)n Simple_repeat Simple_repeat 2 180 0 737 202 6 0 chr5 3474420 3474778 -199610754 + (ATG)n Simple_repeat Simple_repeat 1 360 0 213 196 0 0 chr5 3474794 3474840 -199610692 + (ATG)n Simple_repeat Simple_repeat 1 46 0 230 0 33 0 chr5 3476897 3476927 -199608605 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 350 259 95 41 chr5 3477205 3477481 -199608051 + L1ME LINE L1 958 1260 -5156 2496 38 10 0 chr5 3477481 3477773 -199607759 + AluY SINE Alu 1 295 -16 350 259 95 41 chr5 3477773 3477863 -199607669 + L1ME LINE L1 1260 1344 -5072 240 188 50 38 chr5 3477864 3477944 -199607588 + L1ME LINE L1 1247 1327 -5099 2094 143 10 0 chr5 3479883 3480177 -199605355 + AluSx SINE Alu 1 297 -15 186 43 0 0 chr5 3483960 3483983 -199601549 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 416 259 131 27 chr5 3485634 3485667 -199599865 - MER5C DNA MER1_type 0 324 296 362 21 21 0 chr5 3485667 3485714 -199599818 + (TG)n Simple_repeat Simple_repeat 2 49 0 416 259 131 27 chr5 3485714 3485939 -199599593 - MER5C DNA MER1_type -28 296 39 234 260 65 53 chr5 3487239 3487395 -199598137 + MIR3 SINE MIR 4 159 -63 342 315 100 0 chr5 3487784 3487914 -199597618 + MIR3 SINE MIR 18 160 -48 217 217 0 0 chr5 3489611 3489657 -199595875 - L2 LINE L2 -1 3312 3267 25 65 0 0 chr5 3490218 3490264 -199595268 + AT_rich Low_complexity Low_complexity 1 46 0 4815 254 91 25 chr5 3490335 3492367 -199593165 + L1ME LINE L1 2358 4476 -1950 468 287 134 18 chr5 3493487 3493710 -199591822 - MIR SINE MIR 0 262 14 1861 127 0 0 chr5 3493863 3494108 -199591424 - AluSq SINE Alu -64 249 5 2127 120 0 13 chr5 3494762 3495071 -199590461 - AluSx SINE Alu -7 305 1 3939 166 22 40 chr5 3497098 3497881 -199587651 - LTR1 LTR ERV1 0 785 17 186 71 0 0 chr5 3499641 3499669 -199585863 + (CAAAA)n Simple_repeat Simple_repeat 1 28 0 614 229 32 0 chr5 3499795 3499982 -199585550 - L1MB3 LINE L1 -219 5952 5747 2034 137 0 16 chr5 3500008 3500315 -199585217 + AluSc SINE Alu 1 302 -7 557 118 0 0 chr5 3500233 3500318 -199585214 + AluSc SINE Alu 221 305 -4 2268 177 46 15 chr5 3506067 3506542 -199578990 - L1M2 LINE L1 -500 5812 5323 457 244 105 26 chr5 3506560 3506868 -199578664 - L1MCa LINE L1 -3862 2564 2221 1870 140 58 0 chr5 3506868 3506984 -199578548 + AluSx SINE Alu 2 110 -202 222 37 0 0 chr5 3506984 3507011 -199578521 + (TAAA)n Simple_repeat Simple_repeat 4 30 0 1870 140 58 0 chr5 3507011 3507172 -199578360 + AluSx SINE Alu 110 295 -17 457 244 105 26 chr5 3507172 3507244 -199578288 - L1MCa LINE L1 -4205 2221 2156 317 260 135 10 chr5 3507245 3507349 -199578183 - L1 LINE L1 -944 5202 5086 834 179 5 58 chr5 3507354 3507454 -199578078 + L1 LINE L1 5171 5275 -871 2034 152 10 0 chr5 3507454 3507751 -199577781 + AluSx SINE Alu 1 300 -12 834 179 5 58 chr5 3507751 3507873 -199577659 + L1 LINE L1 5275 5381 -765 1803 163 30 3 chr5 3507873 3508205 -199577327 - MER6 DNA MER2_type 0 865 265 466 248 185 57 chr5 3508205 3508243 -199577289 - L1MCa LINE L1 -5992 434 402 1376 158 153 78 chr5 3508243 3508590 -199576942 + THE1C LTR MaLR 1 373 -2 466 248 185 57 chr5 3508590 3508918 -199576614 - L1MCa LINE L1 -6024 402 21 1986 144 48 17 chr5 3508987 3509342 -199576190 + MER47A DNA MER2_type 1 366 0 186 43 0 0 chr5 3509806 3509829 -199575703 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2154 107 0 0 chr5 3509831 3510103 -199575429 - AluSc SINE Alu -37 272 1 2197 132 28 25 chr5 3511130 3511485 -199574047 - THE1B LTR MaLR 0 364 9 11455 94 19 11 chr5 3511493 3512823 -199572709 - THE1B-int LTR MaLR 0 1580 235 2221 79 0 0 chr5 3512823 3513090 -199572442 - AluY SINE Alu -18 293 27 11455 94 19 11 chr5 3513090 3513327 -199572205 - THE1B-int LTR MaLR -1345 235 1 2407 123 36 22 chr5 3513328 3513686 -199571846 - THE1B LTR MaLR -1 363 1 222 91 0 0 chr5 3515544 3515577 -199569955 + (TCC)n Simple_repeat Simple_repeat 2 34 0 319 111 0 0 chr5 3516544 3516589 -199568943 - THE1B LTR MaLR 0 428 384 1012 87 24 0 chr5 3516589 3516716 -199568816 + AluSq/x SINE Alu 1 130 -182 204 326 84 0 chr5 3517342 3517437 -199568095 + MER5A DNA MER1_type 4 106 -83 182 320 100 10 chr5 3518212 3518312 -199567220 + L2 LINE L2 3150 3258 -14 418 226 0 57 chr5 3518412 3518536 -199566996 - MIR SINE MIR -56 206 90 242 265 39 29 chr5 3521098 3521200 -199564332 + HAL1 LINE L1 769 871 -1636 531 250 5 75 chr5 3521200 3521412 -199564120 + MER3 DNA MER1_type 13 209 0 368 367 29 0 chr5 3521447 3521586 -199563946 + HAL1 LINE L1 1678 1820 -687 442 207 8 43 chr5 3521632 3521898 -199563634 + GA-rich Low_complexity Low_complexity 1 256 0 215 77 0 26 chr5 3522017 3522056 -199563476 + (TG)n Simple_repeat Simple_repeat 2 39 0 276 209 88 0 chr5 3522432 3522523 -199563009 + MER5A DNA MER1_type 26 124 -65 476 296 110 36 chr5 3524443 3525146 -199560386 - L2 LINE L2 -188 3125 2370 289 271 74 25 chr5 3528841 3528963 -199556569 - LTR68 LTR ERV1 -606 134 7 185 0 0 39 chr5 3530202 3530228 -199555304 + (CAGA)n Simple_repeat Simple_repeat 1 25 0 1538 214 30 32 chr5 3532597 3532970 -199552562 + MLT1A2 LTR MaLR 3 374 0 432 245 91 22 chr5 3533011 3533211 -199552321 - MLT1H LTR MaLR -294 255 1 4781 201 49 19 chr5 3533255 3533847 -199551685 - L1MC2 LINE L1 -9 6335 5762 2044 128 34 0 chr5 3533847 3534143 -199551389 + AluSx SINE Alu 1 306 -6 4781 201 49 19 chr5 3534143 3534851 -199550681 - L1MC2 LINE L1 -582 5762 4985 527 248 14 7 chr5 3534878 3535019 -199550513 - MER69A DNA AcHobo -33 144 3 513 0 0 0 chr5 3536281 3536338 -199549194 + (TC)n Simple_repeat Simple_repeat 2 58 0 375 23 0 0 chr5 3536337 3536381 -199549151 + (TA)n Simple_repeat Simple_repeat 1 44 0 * 2437 149 19 9 chr5 3536389 3536708 -199548824 - L1PA16 LINE L1 -21 6145 5820 2375 138 5 22 chr5 3536708 3537078 -199548454 + THE1B LTR MaLR 1 364 0 2437 149 19 9 chr5 3537078 3537180 -199548352 - L1PA16 LINE L1 -346 5820 5720 1837 105 23 11 chr5 3539135 3539401 -199546131 - AluSq SINE Alu -12 301 33 183 186 0 0 chr5 3540826 3540869 -199544663 + (TTCA)n Simple_repeat Simple_repeat 1 43 0 3535 80 2 0 chr5 3540899 3541360 -199544172 + L1PA5 LINE L1 5691 6152 -2 2581 83 9 0 chr5 3541360 3541701 -199543831 + L1PA8 LINE L1 5814 6166 -6 424 343 17 14 chr5 3544884 3545249 -199540283 + (TG)n Simple_repeat Simple_repeat 1 366 0 267 208 60 77 chr5 3545202 3545385 -199540147 + (CATG)n Simple_repeat Simple_repeat 1 180 0 * 345 331 23 17 chr5 3545362 3545534 -199539998 + (TG)n Simple_repeat Simple_repeat 2 174 0 2193 104 0 7 chr5 3546584 3546906 -199538626 - AluSq SINE Alu 0 313 1 399 188 12 47 chr5 3547304 3547389 -199538143 - MER5A DNA MER1_type -83 106 25 277 346 115 6 chr5 3548181 3548337 -199537195 - MER5B DNA MER1_type -3 175 3 202 196 39 0 chr5 3548897 3548948 -199536584 + A-rich Low_complexity Low_complexity 4 56 0 2978 266 31 35 chr5 3549390 3550950 -199534582 + L1MA7 LINE L1 1 1672 -4609 9412 201 44 10 chr5 3550953 3553496 -199532036 + L1MA7 LINE L1 2902 5608 -771 1914 170 40 37 chr5 3553496 3553897 -199531635 + L1MA7 LINE L1 6094 6495 0 9412 201 44 10 chr5 3553897 3553915 -199531617 + L1MA7 LINE L1 5608 5624 -755 199 269 30 0 chr5 3554168 3554235 -199531297 - L2 LINE L2 -219 3053 2985 284 317 45 60 chr5 3554659 3555012 -199530520 - L2 LINE L2 -927 2387 2040 243 261 0 14 chr5 3555320 3555389 -199530143 + GA-rich Low_complexity Low_complexity 2 69 0 361 301 120 32 chr5 3556160 3556376 -199529156 - MIR SINE MIR -6 256 22 2047 248 70 14 chr5 3556414 3556971 -199528561 - MLT1E LTR MaLR -5 588 1 726 148 22 44 chr5 3557241 3557376 -199528156 - FLAM_C SINE Alu -10 133 2 216 234 0 0 chr5 3559465 3559512 -199526020 - L2 LINE L2 -7 3265 3219 215 91 0 23 chr5 3562232 3562276 -199523256 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 1159 244 75 49 chr5 3562616 3563067 -199522465 - MLT1C LTR MaLR -4 463 1 235 248 91 25 chr5 3563163 3563284 -199522248 - L1M4 LINE L1 -1528 4854 4726 698 160 92 23 chr5 3563332 3563463 -199522069 + THE1C LTR MaLR 1 140 -235 2847 174 8 4 chr5 3563490 3564001 -199521531 + HSMAR2 DNA Mariner 169 681 -621 228 117 33 17 chr5 3564065 3564125 -199521407 + (TA)n Simple_repeat Simple_repeat 2 62 0 998 215 59 19 chr5 3564149 3564405 -199521127 - L1MA9 LINE L1 -39 6273 6008 * 1598 276 82 68 chr5 3564402 3565014 -199520518 - L1M4 LINE L1 -3884 2500 1898 1991 142 0 4 chr5 3565014 3565295 -199520237 + AluSx SINE Alu 3 282 -30 1598 276 82 68 chr5 3565295 3565857 -199519675 - L1M4 LINE L1 -4486 1898 1345 2008 154 0 0 chr5 3565857 3566150 -199519382 - AluSx SINE Alu -19 293 1 1598 276 82 68 chr5 3566150 3566704 -199518828 - L1M4 LINE L1 -5039 1345 747 6756 253 67 12 chr5 3567274 3568872 -199516660 + L1PA13 LINE L1 1 1685 -5896 8504 229 27 21 chr5 3568897 3571124 -199514408 + L1PA13 LINE L1 2473 4723 -2861 2230 119 0 6 chr5 3571124 3571436 -199514096 + AluSx SINE Alu 1 310 -2 8504 229 27 21 chr5 3571436 3571750 -199513782 + L1PA13 LINE L1 4723 5034 -2550 8453 196 16 10 chr5 3571772 3574247 -199511285 + L1PA13 LINE L1 5120 7601 0 261 266 25 0 chr5 3575245 3575324 -199510208 + MIR SINE MIR 72 152 -56 1628 224 83 25 chr5 3576443 3576889 -199508643 - MER63C DNA MER1_type -213 717 246 1450 214 31 13 chr5 3578185 3578568 -199506964 + MLT1B LTR MaLR 1 390 0 410 284 14 20 chr5 3581450 3581598 -199503934 + (CATA)n Simple_repeat Simple_repeat 4 150 0 359 339 6 22 chr5 3581548 3581731 -199503801 + (CA)n Simple_repeat Simple_repeat 1 180 0 * 408 328 0 23 chr5 3581743 3581914 -199503618 + (CA)n Simple_repeat Simple_repeat 2 168 0 2374 83 47 39 chr5 3581963 3582324 -199503208 + THE1B LTR MaLR 1 364 0 879 217 77 5 chr5 3582708 3582929 -199502603 + MLT1A1 LTR MaLR 129 365 0 23 0 0 0 chr5 3583637 3583660 -199501872 + AT_rich Low_complexity Low_complexity 1 23 0 548 261 22 0 chr5 3583843 3583981 -199501551 + MER58A DNA MER1_type 37 177 -47 305 221 132 42 chr5 3584654 3584844 -199500688 + LTR33A LTR ERVL 268 474 -49 1378 193 27 24 chr5 3587391 3587687 -199497845 + AluJo SINE Alu 1 297 -15 375 328 8 0 chr5 3587695 3587829 -199497703 - HAL1 LINE L1 -125 2382 2248 267 31 0 0 chr5 3587854 3587886 -199497646 + (CA)n Simple_repeat Simple_repeat 1 32 0 486 270 0 0 chr5 3589311 3589489 -199496043 + (CA)n Simple_repeat Simple_repeat 2 179 0 1999 138 165 8 chr5 3590632 3591002 -199494530 + MSTA LTR MaLR 1 428 0 1000 154 32 6 chr5 3591030 3591186 -199494346 + FRAM SINE Alu 1 157 -19 2162 123 0 3 chr5 3591345 3591645 -199493887 - AluSc SINE Alu -9 300 2 198 311 75 81 chr5 3591978 3592139 -199493393 + L3b LINE CR1 1344 1503 -80 2302 118 52 6 chr5 3593072 3593420 -199492112 - THE1B LTR MaLR 0 364 1 1995 55 4 12 chr5 3595319 3595574 -199489958 - L1P3 LINE L1 -533 5621 5369 1450 98 0 0 chr5 3595574 3595767 -199489765 + L1PA7 LINE L1 5960 6153 -1 4453 209 120 72 chr5 3596092 3598464 -199487068 + L1MD1 LINE L1 19 2277 -4263 1524 184 29 7 chr5 3598464 3598741 -199486791 + AluJb SINE Alu 3 285 -27 225 65 0 0 chr5 3598748 3598779 -199486753 + (CATA)n Simple_repeat Simple_repeat 2 32 0 4453 209 120 72 chr5 3598779 3598871 -199486661 + L1MD1 LINE L1 2282 2680 -3860 3449 211 65 59 chr5 3598879 3599920 -199485612 + L1MD1 LINE L1 4974 6008 -628 2413 68 0 7 chr5 3599920 3600237 -199485295 - AluY SINE Alu 0 311 2 3449 211 65 59 chr5 3600237 3600264 -199485268 + L1MD1 LINE L1 6008 6033 -603 2220 177 32 20 chr5 3600264 3600523 -199485009 - MER65A LTR ERV1 0 445 177 315 0 0 0 chr5 3600523 3600558 -199484974 + (TG)n Simple_repeat Simple_repeat 1 35 0 2220 177 32 20 chr5 3600558 3600738 -199484794 - MER65A LTR ERV1 -268 177 1 3449 211 65 59 chr5 3600738 3601230 -199484302 + L1MD1 LINE L1 6033 6531 -105 2720 30 7 0 chr5 3601230 3601532 -199484000 + AluY SINE Alu 1 304 -7 3449 211 65 59 chr5 3601532 3601590 -199483942 + L1MD1 LINE L1 6531 6587 -49 210 37 0 0 chr5 3602784 3602811 -199482721 + (CA)n Simple_repeat Simple_repeat 2 28 0 * 216 0 0 0 chr5 3602810 3602834 -199482698 + (GA)n Simple_repeat Simple_repeat 2 25 0 323 163 12 0 chr5 3602933 3603013 -199482519 + (CA)n Simple_repeat Simple_repeat 2 82 0 213 204 23 23 chr5 3603032 3603120 -199482412 + (CA)n Simple_repeat Simple_repeat 2 89 0 672 252 9 51 chr5 3603683 3603897 -199481635 - MER101 LTR ERV1 -19 455 251 405 248 152 21 chr5 3604069 3604214 -199481318 - MER101 LTR ERV1 -302 172 9 421 213 31 55 chr5 3604473 3604600 -199480932 - MER5A DNA MER1_type -2 187 64 2384 100 3 0 chr5 3604828 3605129 -199480403 - AluSx SINE Alu -10 302 1 2440 70 0 13 chr5 3605558 3605859 -199479673 + AluY SINE Alu 1 297 -14 771 251 26 11 chr5 3606957 3607148 -199478384 + MLT1B LTR MaLR 195 388 -2 312 27 0 0 chr5 3608020 3608057 -199477475 + (TG)n Simple_repeat Simple_repeat 1 37 0 2199 112 6 34 chr5 3608553 3608874 -199476658 - AluSx SINE Alu 0 312 1 327 226 13 7 chr5 3612531 3612686 -199472846 + GA-rich Low_complexity Low_complexity 1 156 0 184 333 69 0 chr5 3613943 3614015 -199471517 + MIR SINE MIR 116 192 -70 318 204 68 116 chr5 3615726 3615873 -199469659 - MLT1B LTR MaLR -246 144 5 318 296 99 62 chr5 3617112 3617355 -199468177 + L1MC/D LINE L1 5456 5707 -2101 520 244 125 0 chr5 3618078 3618238 -199467294 + MER31B LTR ERV1 2 181 -285 1135 233 94 36 chr5 3618648 3619086 -199466446 + MER101 LTR ERV1 12 474 0 5239 149 18 6 chr5 3620713 3621942 -199463590 - L1PA15 LINE L1 -21 6144 4902 1245 193 7 15 chr5 3621933 3622203 -199463329 + L1PA15 LINE L1 4619 4886 -1260 * 459 174 6 56 chr5 3623464 3623642 -199461890 + GA-rich Low_complexity Low_complexity 1 169 0 2316 91 7 0 chr5 3623652 3623950 -199461582 + AluSq SINE Alu 13 312 -1 200 260 100 0 chr5 3624243 3624293 -199461239 - MER5A DNA MER1_type -5 184 130 1614 180 4 0 chr5 3624483 3624795 -199460737 - AluJb SINE Alu 0 312 33 1899 171 84 3 chr5 3625041 3625432 -199460100 + MSTB LTR MaLR 4 426 0 2398 237 33 32 chr5 3627175 3627867 -199457665 + L1MD2 LINE L1 5473 6165 -194 248 320 21 10 chr5 3627871 3627968 -199457564 + (CA)n Simple_repeat Simple_repeat 1 98 0 473 302 0 39 chr5 3627985 3628167 -199457365 + (CA)n Simple_repeat Simple_repeat 1 175 0 375 197 26 0 chr5 3628172 3628248 -199457284 + L1MD2 LINE L1 6139 6216 -143 291 296 61 0 chr5 3628356 3628471 -199457061 + L1MD2 LINE L1 6230 6351 -8 1838 134 3 24 chr5 3628477 3628768 -199456764 - AluSg1 SINE Alu -14 295 11 804 216 0 2 chr5 3632740 3633192 -199452340 + (CCCA)n Simple_repeat Simple_repeat 1 450 0 318 204 68 116 chr5 3635058 3635205 -199450327 - MLT1B LTR MaLR -246 144 5 324 298 99 58 chr5 3636444 3636686 -199448846 + L1MC/D LINE L1 5456 5707 -2101 520 244 125 0 chr5 3637409 3637569 -199447963 + MER31B LTR ERV1 2 181 -285 1135 233 94 36 chr5 3637979 3638417 -199447115 + MER101 LTR ERV1 12 474 0 5309 149 16 6 chr5 3640045 3641276 -199444256 - L1PA15 LINE L1 -21 6144 4902 1245 193 7 15 chr5 3641267 3641537 -199443995 + L1PA15 LINE L1 4619 4886 -1260 * 463 209 19 19 chr5 3642796 3642954 -199442578 + A-rich Low_complexity Low_complexity 5 162 0 225 233 0 50 chr5 3642955 3642987 -199442545 + GA-rich Low_complexity Low_complexity 4 33 -27 2316 91 7 0 chr5 3642987 3643285 -199442247 + AluSq SINE Alu 13 312 -1 225 233 0 50 chr5 3643285 3643312 -199442220 + GA-rich Low_complexity Low_complexity 33 60 0 200 260 100 0 chr5 3643578 3643628 -199441904 - MER5A DNA MER1_type -5 184 130 1614 180 4 0 chr5 3643818 3644130 -199441402 - AluJb SINE Alu 0 312 33 1899 171 84 3 chr5 3644376 3644767 -199440765 + MSTB LTR MaLR 4 426 0 2425 234 33 32 chr5 3646510 3647202 -199438330 + L1MD2 LINE L1 5473 6165 -194 237 320 21 10 chr5 3647206 3647303 -199438229 + (CA)n Simple_repeat Simple_repeat 1 98 0 441 311 0 39 chr5 3647320 3647500 -199438032 + (CA)n Simple_repeat Simple_repeat 1 173 0 382 197 26 0 chr5 3647505 3647581 -199437951 + L1MD2 LINE L1 6139 6216 -143 319 278 61 0 chr5 3647689 3647804 -199437728 + L1MD2 LINE L1 6230 6351 -8 1798 132 3 31 chr5 3647810 3648099 -199437433 - AluSg1 SINE Alu -18 291 11 803 196 0 6 chr5 3652070 3652249 -199433283 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 219 300 17 0 chr5 3652249 3652309 -199433223 + (TCCA)n Simple_repeat Simple_repeat 1 61 0 330 106 0 0 chr5 3654607 3654654 -199430878 + Alu SINE Alu 1 47 -261 354 128 0 0 chr5 3654666 3654729 -199430803 + Alu SINE Alu 1 47 -255 2209 92 7 0 chr5 3654755 3655038 -199430494 + AluSx SINE Alu 1 285 -27 222 274 186 18 chr5 3655948 3656061 -199429471 + MIR SINE MIR 13 144 -118 2176 133 0 0 chr5 3656687 3656988 -199428544 + AluSg SINE Alu 1 301 -9 2838 110 19 19 chr5 3657931 3658357 -199427175 + L1PA11 LINE L1 5746 6171 -3 550 194 10 0 chr5 3658378 3658476 -199427056 + FLAM_A SINE Alu 12 110 -32 309 26 0 0 chr5 3658478 3658516 -199427016 + (TC)n Simple_repeat Simple_repeat 1 38 0 378 107 0 0 chr5 3658518 3658574 -199426958 + (GGA)n Simple_repeat Simple_repeat 3 58 0 317 237 13 0 chr5 3660006 3660082 -199425450 + MER103 DNA DNA 8 84 -82 462 274 7 28 chr5 3660722 3660930 -199424602 + C-rich Low_complexity Low_complexity 1 203 0 714 226 73 29 chr5 3662334 3662649 -199422883 + MLT1A1 LTR MaLR 4 354 -36 25 0 0 0 chr5 3663259 3663284 -199422248 + AT_rich Low_complexity Low_complexity 1 25 0 2272 112 128 13 chr5 3663669 3664053 -199421479 - MSTA LTR MaLR 0 428 1 23 54 0 0 chr5 3664185 3664222 -199421310 + AT_rich Low_complexity Low_complexity 1 37 0 1988 211 42 68 chr5 3664340 3664984 -199420548 - MER63C DNA MER1_type -303 627 1 329 335 62 40 chr5 3664987 3665163 -199420369 + L1M4 LINE L1 3742 3921 -2225 277 261 23 0 chr5 3665610 3665698 -199419834 + L1M4 LINE L1 4137 4226 -1920 2316 109 0 6 chr5 3666089 3666402 -199419130 - AluSq SINE Alu -2 311 1 228 143 0 0 chr5 3666425 3666467 -199419065 + (T)n Simple_repeat Simple_repeat 1 42 0 21 36 0 0 chr5 3666880 3666908 -199418624 + AT_rich Low_complexity Low_complexity 1 28 0 299 276 57 57 chr5 3667340 3667452 -199418080 - L1ME4a LINE L1 -158 5963 5852 4839 95 6 13 chr5 3667452 3668139 -199417393 - L1PA8A LINE L1 -4 6127 5446 299 276 57 57 chr5 3668139 3668309 -199417223 - L1ME4a LINE L1 -268 5853 5681 23 0 0 0 chr5 3669056 3669079 -199416453 + AT_rich Low_complexity Low_complexity 1 23 0 200 309 0 0 chr5 3669455 3669552 -199415980 + (GGATG)n Simple_repeat Simple_repeat 1 97 0 399 41 0 0 chr5 3670055 3670104 -199415428 + (GA)n Simple_repeat Simple_repeat 2 50 0 231 245 0 0 chr5 3673134 3673228 -199412304 + (CA)n Simple_repeat Simple_repeat 2 95 0 558 246 2 0 chr5 3676090 3676673 -199408859 + (CA)n Simple_repeat Simple_repeat 1 584 0 247 237 0 0 chr5 3676800 3676859 -199408673 + (TG)n Simple_repeat Simple_repeat 2 60 0 310 274 11 11 chr5 3676860 3676955 -199408577 + (CA)n Simple_repeat Simple_repeat 2 96 0 225 322 35 0 chr5 3676974 3677061 -199408471 + MIR3 SINE MIR 82 171 -37 357 187 0 0 chr5 3677188 3677263 -199408269 + (CA)n Simple_repeat Simple_repeat 1 75 0 201 241 0 0 chr5 3677336 3677390 -199408142 + (CA)n Simple_repeat Simple_repeat 1 54 0 231 356 11 0 chr5 3677542 3677632 -199407900 + (CACG)n Simple_repeat Simple_repeat 1 91 0 210 286 0 18 chr5 3677943 3677999 -199407533 + GA-rich Low_complexity Low_complexity 2 56 0 32 75 0 0 chr5 3678167 3678234 -199407298 + AT_rich Low_complexity Low_complexity 1 67 0 303 28 0 0 chr5 3678701 3678737 -199406795 + (CA)n Simple_repeat Simple_repeat 1 36 0 263 272 54 17 chr5 3680807 3681065 -199404467 + MLT1A1 LTR MaLR 48 363 -11 203 333 29 0 chr5 3683820 3683889 -199401643 - L2 LINE L2 -16 3297 3227 1534 253 98 48 chr5 3684242 3684826 -199400706 + L1MCb LINE L1 717 1270 -5475 405 0 0 0 chr5 3684826 3684871 -199400661 + (CA)n Simple_repeat Simple_repeat 2 46 0 1534 253 98 48 chr5 3684871 3685938 -199399594 + L1MCb LINE L1 1270 2732 -4013 323 135 0 0 chr5 3685964 3686016 -199399516 - MLT2B1 LTR ERVL 0 520 469 305 258 32 21 chr5 3686041 3686134 -199399398 + L1MC4 LINE L1 6615 6708 -1334 * 315 178 19 122 chr5 3686094 3686201 -199399331 - L1MC4 LINE L1 -1333 6709 6614 12075 85 14 12 chr5 3686366 3688045 -199397487 - HERVL LTR ERVL -429 5225 3545 456 326 63 40 chr5 3688069 3688612 -199396920 + L1MEc LINE L1 1714 2268 -4128 1073 149 5 0 chr5 3688732 3688933 -199396599 - L1P LINE L1 -3603 2543 2342 7545 194 9 32 chr5 3688934 3691269 -199394263 + L1PA14 LINE L1 3813 6159 -2 1289 130 5 9 chr5 3691269 3691484 -199394048 + L1MA4A LINE L1 5772 5985 -318 1411 126 10 0 chr5 3691536 3691734 -199393798 - AluSc SINE Alu -5 304 105 265 306 41 54 chr5 3692156 3692303 -199393229 + MIR SINE MIR 102 246 -16 280 230 10 10 chr5 3692305 3692405 -199393127 + CT-rich Low_complexity Low_complexity 3 102 0 1679 199 30 60 chr5 3692654 3693056 -199392476 + MLT1B LTR MaLR 1 390 0 275 200 0 0 chr5 3694495 3694545 -199390987 - Alu SINE Alu -250 50 1 823 205 18 0 chr5 3694545 3694716 -199390816 + L1MA4A LINE L1 6059 6232 -71 238 92 46 62 chr5 3696153 3696218 -199389314 + L1PA16 LINE L1 6100 6163 -3 1714 249 133 26 chr5 3696722 3697457 -199388075 + L1ME2 LINE L1 46 757 -5288 2326 96 3 0 chr5 3697496 3697798 -199387734 + AluSg SINE Alu 4 306 -4 222 297 47 0 chr5 3698719 3698783 -199386749 + MER5A DNA MER1_type 35 101 -88 23 0 0 0 chr5 3698836 3698859 -199386673 + AT_rich Low_complexity Low_complexity 1 23 0 187 320 126 0 chr5 3701794 3701897 -199383635 - L3 LINE CR1 -551 1026 911 355 303 123 20 chr5 3704029 3704224 -199381308 + L3 LINE CR1 773 987 -590 2116 129 3 7 chr5 3704811 3705113 -199380419 - AluSx SINE Alu -11 301 1 25 0 0 0 chr5 3706335 3706360 -199379172 + AT_rich Low_complexity Low_complexity 1 25 0 200 79 105 0 chr5 3708516 3708554 -199376978 + MER5B DNA MER1_type 3 44 -134 237 333 29 10 chr5 3711721 3711823 -199373709 - MIR SINE MIR -79 183 80 459 229 0 8 chr5 3712018 3712140 -199373392 + L1ME2 LINE L1 3131 3251 -3313 1541 262 135 18 chr5 3712153 3713185 -199372347 + L1ME2 LINE L1 4895 6043 -541 911 247 83 43 chr5 3713605 3714091 -199371441 + L1ME2 LINE L1 6032 6535 -47 198 327 101 24 chr5 3714901 3715069 -199370463 - MIR SINE MIR -73 189 9 1047 236 57 20 chr5 3715666 3715963 -199369569 - MER54B LTR ERVL 0 793 486 214 91 0 45 chr5 3717101 3717145 -199368387 + (CCCTAA)n Simple_repeat Simple_repeat 1 42 0 826 180 8 0 chr5 3717959 3718316 -199367216 + (TCCA)n Simple_repeat Simple_repeat 1 360 0 795 177 12 0 chr5 3718333 3718588 -199366944 + (TCCA)n Simple_repeat Simple_repeat 1 258 0 489 219 0 0 chr5 3718600 3718714 -199366818 + (TCCA)n Simple_repeat Simple_repeat 2 115 0 316 307 34 0 chr5 3718714 3718802 -199366730 - L2 LINE L2 0 3313 3223 23 0 0 0 chr5 3719155 3719178 -199366354 + AT_rich Low_complexity Low_complexity 1 23 0 2164 82 43 0 chr5 3720802 3721083 -199364449 + AluY SINE Alu 1 293 -18 210 203 17 17 chr5 3721981 3722040 -199363492 + GA-rich Low_complexity Low_complexity 3 61 0 227 240 91 109 chr5 3722525 3722700 -199362832 - MIR SINE MIR -25 183 1 374 91 0 0 chr5 3724488 3724543 -199360989 - MLT2A2 LTR ERVL 0 453 399 224 169 70 28 chr5 3724547 3724689 -199360843 + (TA)n Simple_repeat Simple_repeat 1 148 0 235 167 19 0 chr5 3724633 3724687 -199360845 + (TATAA)n Simple_repeat Simple_repeat 5 59 0 2147 126 10 0 chr5 3725664 3725966 -199359566 - AluSx SINE Alu -7 305 1 427 315 34 7 chr5 3728948 3729094 -199356438 - MIR SINE MIR -46 216 67 505 259 79 41 chr5 3729264 3729689 -199355843 - MLT1D LTR MaLR -17 450 1 269 252 145 23 chr5 3730642 3730773 -199354759 + MLT1L LTR MaLR 237 419 -128 479 222 19 0 chr5 3732768 3732876 -199352656 + HY1 scRNA scRNA 1 110 -2 683 74 0 54 chr5 3733069 3733218 -199352314 + (TTAGGG)n Simple_repeat Simple_repeat 1 141 0 632 323 76 56 chr5 3733455 3733879 -199351653 + HAL1b LINE L1 4 354 -994 348 127 0 0 chr5 3733879 3733934 -199351598 + (GGAA)n Simple_repeat Simple_repeat 4 58 0 404 281 90 36 chr5 3733935 3734102 -199351430 + HAL1b LINE L1 339 514 -834 732 290 72 28 chr5 3735043 3735585 -199349947 - L1MEc LINE L1 -3207 2922 2357 2293 109 0 13 chr5 3735629 3735942 -199349590 - AluSg SINE Alu -1 309 1 665 321 79 44 chr5 3735999 3736760 -199348772 - L1MEc LINE L1 -3890 2239 1436 285 256 25 113 chr5 3736863 3737066 -199348466 - L1MEc LINE L1 -4862 1257 1073 335 224 82 112 chr5 3737067 3737263 -199348269 - L1MEc LINE L1 -5100 1019 830 621 200 0 0 chr5 3737269 3737404 -199348128 + FRAM SINE Alu 38 172 0 314 288 73 110 chr5 3737404 3737623 -199347909 - L1MEc LINE L1 -5306 813 603 23 0 0 0 chr5 3737879 3737902 -199347630 + AT_rich Low_complexity Low_complexity 1 23 0 1160 166 5 0 chr5 3737902 3738107 -199347425 - L1PB1 LINE L1 -1 6150 5945 3042 167 22 8 chr5 3738172 3739245 -199346287 + L1M1 LINE L1 4688 5780 -523 * 5877 206 8 5 chr5 3739243 3740562 -199344970 - L1P LINE L1 -2314 3832 2509 2937 92 5 2 chr5 3740662 3741087 -199344445 - L1PA7 LINE L1 -72 6082 5657 1324 42 0 12 chr5 3744042 3744208 -199341324 - L1PA5 LINE L1 -1 6153 5990 2173 30 0 0 chr5 3744208 3744472 -199341060 + L1PA5 LINE L1 5710 5973 -182 184 306 40 40 chr5 3746552 3746676 -199338856 - L2 LINE L2 -11 3261 3138 333 0 0 0 chr5 3748733 3748770 -199336762 + (T)n Simple_repeat Simple_repeat 1 37 0 8514 212 56 74 chr5 3954019 3954310 -199131222 - L1MA6 LINE L1 -237 7482 7187 892 233 165 45 chr5 3954310 3954576 -199130956 - AluJb SINE Alu -4 298 1 8514 212 56 74 chr5 3954576 3956001 -199129531 - L1MA6 LINE L1 -532 7187 5737 1793 162 7 10 chr5 3956001 3956297 -199129235 - AluSx SINE Alu -17 295 1 8514 212 56 74 chr5 3956297 3957999 -199127533 - L1MA6 LINE L1 -1982 5737 4005 1451 131 40 33 chr5 3957999 3958273 -199127259 - AluSq SINE Alu -7 306 31 8514 212 56 74 chr5 3958273 3958374 -199127158 - L1MA6 LINE L1 -3714 4005 3904 244 250 0 0 chr5 3958374 3958434 -199127098 - AluS SINE Alu -241 60 1 8514 212 56 74 chr5 3958434 3960567 -199124965 - L1MA6 LINE L1 -3815 3904 1884 258 393 28 7 chr5 3960668 3960928 -199124604 - L1M3a LINE L1 -5227 728 357 276 341 52 12 chr5 3961050 3961339 -199124193 - L1M3a LINE L1 -5196 759 541 1030 311 39 30 chr5 3961394 3961970 -199123562 - L1M3a LINE L1 -5195 760 2 254 314 161 0 chr5 3962234 3962352 -199123180 + L1MEc LINE L1 37 173 -6223 1352 296 44 2 chr5 3962748 3963204 -199122328 + LTR16C LTR ERVL 2 476 -15 819 245 61 32 chr5 3964240 3964518 -199121014 - MLT1F1 LTR MaLR 0 567 282 181 320 31 21 chr5 3964838 3964935 -199120597 + MIR3 SINE MIR 101 198 -10 732 215 55 100 chr5 3966424 3966805 -199118727 - L1MD1 LINE L1 -12 6230 5867 625 157 9 0 chr5 3967091 3967199 -199118333 - MLT1B LTR MaLR -3 387 279 1033 248 158 25 chr5 3967944 3968380 -199117152 + MLT1D LTR MaLR 12 505 0 238 343 35 14 chr5 3969228 3969371 -199116161 - MIR SINE MIR -81 181 36 477 0 0 0 chr5 3969486 3969539 -199115993 + (CA)n Simple_repeat Simple_repeat 2 54 0 261 0 0 0 chr5 3969581 3969610 -199115922 + (CA)n Simple_repeat Simple_repeat 2 30 0 333 0 0 0 chr5 3969652 3969689 -199115843 + (CA)n Simple_repeat Simple_repeat 2 38 0 225 0 0 0 chr5 3969689 3969714 -199115818 + (A)n Simple_repeat Simple_repeat 1 25 0 2469 52 0 29 chr5 3971095 3971401 -199114131 - AluY SINE Alu -14 297 1 1353 149 117 25 chr5 3971403 3971684 -199113848 - AluY SINE Alu -4 307 1 999 78 8 0 chr5 3971703 3971832 -199113700 - AluY SINE Alu -181 130 1 964 88 0 0 chr5 3972812 3972948 -199112584 + L1PA14 LINE L1 6023 6158 -3 302 257 57 9 chr5 3974957 3975062 -199110470 - MIR SINE MIR -12 250 141 21 0 0 0 chr5 3976608 3976629 -199108903 + AT_rich Low_complexity Low_complexity 1 21 0 2158 119 3 0 chr5 3977841 3978136 -199107396 - AluSx SINE Alu -16 296 1 231 217 0 0 chr5 3979380 3979440 -199106092 + (CA)n Simple_repeat Simple_repeat 2 61 0 213 310 0 49 chr5 3979926 3980110 -199105422 + G-rich Low_complexity Low_complexity 2 176 0 239 231 52 35 chr5 3980189 3980362 -199105170 + (GGGTG)n Simple_repeat Simple_repeat 5 180 0 394 144 0 76 chr5 3980655 3980773 -199104759 + AluSq/x SINE Alu 8 116 -187 25 65 0 0 chr5 3984206 3984252 -199101280 + AT_rich Low_complexity Low_complexity 1 46 0 315 0 0 0 chr5 3984818 3984853 -199100679 + (CA)n Simple_repeat Simple_repeat 2 36 0 262 214 230 16 chr5 3985424 3985550 -199099982 - MIR SINE MIR -43 219 67 2415 81 0 0 chr5 3985955 3986252 -199099280 - AluY SINE Alu -14 297 1 267 286 36 27 chr5 3987071 3987183 -199098349 + MIR SINE MIR 17 129 -133 2222 120 10 0 chr5 3987209 3987517 -199098015 - AluSp SINE Alu -2 311 1 218 245 0 0 chr5 3988462 3988511 -199097021 - MIR SINE MIR -13 249 201 358 298 8 8 chr5 3988866 3988990 -199096542 - MER5B DNA MER1_type -49 129 6 5648 182 56 10 chr5 3990206 3990725 -199094807 + Tigger3b DNA MER2_type 13 507 -2521 180 0 0 0 chr5 3990725 3990745 -199094787 + (TAAA)n Simple_repeat Simple_repeat 3 22 0 5648 182 56 10 chr5 3990745 3990766 -199094766 + Tigger3b DNA MER2_type 507 526 -2502 2350 119 0 0 chr5 3990766 3991078 -199094454 + AluSx SINE Alu 1 312 0 5648 182 56 10 chr5 3991078 3991702 -199093830 + Tigger3b DNA MER2_type 526 1231 0 1619 46 0 0 chr5 3992037 3992234 -199093298 - L1PA5 LINE L1 0 6154 5958 291 252 84 35 chr5 3992261 3992404 -199093128 - L1ME LINE L1 -450 5671 5522 27 0 0 0 chr5 3992601 3992628 -199092904 + AT_rich Low_complexity Low_complexity 1 27 0 199 239 0 0 chr5 3993312 3993358 -199092174 - MIR SINE MIR -111 151 106 7435 156 26 2 chr5 3993555 3995543 -199089989 - L1PA14 LINE L1 -214 5947 3919 200 83 0 28 chr5 3995543 3995579 -199089953 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 7067 26 0 1 chr5 3995579 3996386 -199089146 - L1PA3 LINE L1 -24 6131 5326 6487 34 0 0 chr5 3996383 3997157 -199088375 + L1PA3 LINE L1 4559 5332 -814 * 3957 167 17 21 chr5 3997151 3997344 -199088188 - L1PA14 LINE L1 -2221 3925 3733 * 2295 100 7 0 chr5 3997344 3997643 -199087889 - AluSg SINE Alu -9 301 1 3957 167 17 21 chr5 3997643 3998197 -199087335 - L1PA14 LINE L1 -2413 3733 3181 314 264 241 62 chr5 3998310 3999005 -199086527 - L1M2 LINE L1 -4300 2096 1297 234 0 0 0 chr5 3999169 3999195 -199086337 + (CA)n Simple_repeat Simple_repeat 2 27 0 308 286 52 28 chr5 3999288 3999536 -199085996 - L1ME LINE L1 -5262 808 555 2133 168 32 8 chr5 4000089 4000469 -199085063 - MLT1B LTR MaLR -1 389 1 938 314 99 8 chr5 4000469 4001118 -199084414 + L2 LINE L2 1916 2716 -598 394 282 41 9 chr5 4001152 4001372 -199084160 + L1ME3 LINE L1 4382 4608 -1538 789 62 0 23 chr5 4001380 4001508 -199084024 + (TG)n Simple_repeat Simple_repeat 2 126 0 225 0 0 0 chr5 4001675 4001700 -199083832 + (CA)n Simple_repeat Simple_repeat 2 26 0 978 258 98 43 chr5 4001706 4002449 -199083083 + L1ME3 LINE L1 5121 5921 -241 184 346 80 16 chr5 4002489 4002677 -199082855 + L2 LINE L2 2826 3025 -288 398 313 33 0 chr5 4002694 4002844 -199082688 + L2 LINE L2 3141 3295 -18 241 321 68 21 chr5 4004331 4004521 -199081011 + L2 LINE L2 2881 3079 -234 256 276 67 29 chr5 4004645 4004750 -199080782 + L2 LINE L2 3201 3309 -4 1318 213 135 19 chr5 4006329 4006743 -199078789 + MLT1C LTR MaLR 5 466 -1 255 119 45 15 chr5 4009912 4009979 -199075553 + GA-rich Low_complexity Low_complexity 1 69 0 4106 211 40 34 chr5 4011239 4011275 -199074257 + L1M3 LINE L1 4213 4247 -1936 189 74 0 0 chr5 4011275 4011302 -199074230 + (CA)n Simple_repeat Simple_repeat 1 27 0 4106 211 40 34 chr5 4011302 4012659 -199072873 + L1M3 LINE L1 4247 5613 -570 939 177 0 0 chr5 4012681 4012828 -199072704 + FRAM SINE Alu 6 152 -24 468 91 0 0 chr5 4012837 4012903 -199072629 + (TAGA)n Simple_repeat Simple_repeat 3 68 0 249 33 0 0 chr5 4013749 4013779 -199071753 + (TG)n Simple_repeat Simple_repeat 1 30 0 1726 168 3 18 chr5 4013925 4014211 -199071321 - AluJo SINE Alu -30 282 1 2094 119 0 17 chr5 4021624 4021926 -199063606 - AluSx SINE Alu -15 297 1 1564 218 78 43 chr5 4022067 4022385 -199063147 - MLT1D LTR MaLR 0 505 163 2179 125 0 0 chr5 4022385 4022674 -199062858 - AluSx SINE Alu -23 289 1 1564 218 78 43 chr5 4022674 4022842 -199062690 - MLT1D LTR MaLR -342 163 2 262 371 34 0 chr5 4023220 4023309 -199062223 + L2 LINE L2 3165 3256 -16 430 254 14 14 chr5 4023499 4023637 -199061895 + L2 LINE L2 3175 3312 -1 4206 106 23 2 chr5 4023783 4024386 -199061146 - L1PB2 LINE L1 -114 6037 5422 1043 216 5 10 chr5 4024391 4024595 -199060937 - AluJo SINE Alu -26 286 84 2295 108 0 0 chr5 4024981 4025276 -199060256 + AluSg SINE Alu 1 295 -15 43966 34 18 2 chr5 4027285 4033335 -199052197 + L1PA3 LINE L1 1 6155 0 22 0 0 0 chr5 4033409 4033431 -199052101 + AT_rich Low_complexity Low_complexity 1 22 0 1037 291 40 2 chr5 4033446 4033896 -199051636 + L1M4 LINE L1 4138 4604 -1542 665 175 7 0 chr5 4033906 4034043 -199051489 + (ATG)n Simple_repeat Simple_repeat 1 138 0 255 170 0 0 chr5 4034153 4034200 -199051332 + (ATG)n Simple_repeat Simple_repeat 1 47 0 862 271 116 32 chr5 4034237 4034516 -199051016 + L1M4 LINE L1 4647 4901 -1245 207 0 0 0 chr5 4034516 4034539 -199050993 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 862 271 116 32 chr5 4034539 4034846 -199050686 + L1M4 LINE L1 4901 5282 -864 645 243 34 28 chr5 4035500 4035677 -199049855 - MER20 DNA MER1_type -31 188 11 254 169 34 17 chr5 4036586 4036645 -199048887 + MLT1K LTR MaLR 184 243 -345 341 21 0 21 chr5 4036963 4037010 -199048522 + (TTTA)n Simple_repeat Simple_repeat 2 47 0 1298 214 21 32 chr5 4037014 4037299 -199048233 - AluJo SINE Alu -30 282 1 461 198 8 0 chr5 4037347 4037473 -199048059 + (TG)n Simple_repeat Simple_repeat 2 128 0 239 274 0 16 chr5 4037501 4037563 -199047969 - MIR3 SINE MIR -29 179 119 2226 125 0 22 chr5 4037894 4038213 -199047319 + AluSx SINE Alu 1 312 0 392 312 36 84 chr5 4038647 4039003 -199046529 + L3 LINE CR1 1207 1545 -32 291 209 186 0 chr5 4039163 4039249 -199046283 + LTR16A LTR ERVL 242 343 -107 186 349 16 0 chr5 4040087 4040150 -199045382 - MIR3 SINE MIR -3 205 142 216 0 0 0 chr5 4041192 4041216 -199044316 + (T)n Simple_repeat Simple_repeat 1 24 0 565 198 132 56 chr5 4046417 4046614 -199038918 + MER20 DNA MER1_type 7 218 -1 200 32 32 0 chr5 4047164 4047173 -199038359 + (CAA)n Simple_repeat Simple_repeat 2 9 -24 2058 133 0 25 chr5 4047173 4047489 -199038043 + AluSx SINE Alu 1 308 -4 200 32 32 0 chr5 4047489 4047510 -199038022 + (CAA)n Simple_repeat Simple_repeat 9 33 0 225 0 0 0 chr5 4051599 4051624 -199033908 + (T)n Simple_repeat Simple_repeat 1 25 0 596 253 122 90 chr5 4053085 4054733 -199030799 + L1ME1 LINE L1 497 2210 -4186 2120 139 3 3 chr5 4054733 4055043 -199030489 - AluSx SINE Alu -2 310 1 596 253 122 90 chr5 4055043 4055203 -199030329 + L1ME1 LINE L1 2210 2363 -4033 279 169 67 0 chr5 4055209 4055298 -199030234 + (TA)n Simple_repeat Simple_repeat 1 95 0 3586 261 99 43 chr5 4055325 4056647 -199028885 + L1ME1 LINE L1 2861 4108 -2127 222 37 0 0 chr5 4056647 4056674 -199028858 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1838 143 34 0 chr5 4056682 4056948 -199028584 - AluSx SINE Alu -32 280 6 3586 261 99 43 chr5 4056948 4057168 -199028364 + L1ME1 LINE L1 4114 4320 -1915 1235 259 61 5 chr5 4057168 4057543 -199027989 - MSTD LTR MaLR 0 396 1 3586 261 99 43 chr5 4057543 4059083 -199026449 + L1ME1 LINE L1 4320 6131 -104 2541 271 65 31 chr5 4059467 4061399 -199024133 + L1MEc LINE L1 2019 3985 -2230 364 236 32 13 chr5 4061681 4061838 -199023694 + L1MEc LINE L1 2924 3083 -3132 * 573 264 31 23 chr5 4061818 4062079 -199023453 + L1MEc LINE L1 4223 4485 -1730 1357 257 104 48 chr5 4062182 4062739 -199022793 + L1ME3 LINE L1 4228 4753 -1409 186 103 0 0 chr5 4062739 4062768 -199022764 + (CA)n Simple_repeat Simple_repeat 2 30 0 1357 257 104 48 chr5 4062768 4063836 -199021696 + L1ME3 LINE L1 4753 5938 -224 4618 22 2 4 chr5 4064239 4064784 -199020748 - L1PA4 LINE L1 -19 6136 5593 21 0 0 0 chr5 4064789 4064810 -199020722 + AT_rich Low_complexity Low_complexity 1 21 0 216 67 0 0 chr5 4065165 4065195 -199020337 + (CA)n Simple_repeat Simple_repeat 2 31 0 2201 69 0 3 chr5 4065978 4066269 -199019263 - L1PA7 LINE L1 0 6154 5865 2789 93 37 0 chr5 4066269 4066698 -199018834 + L1P LINE L1 3443 3887 -2259 25 0 0 0 chr5 4066733 4066758 -199018774 + AT_rich Low_complexity Low_complexity 1 25 0 2361 86 0 10 chr5 4067203 4067504 -199018028 - AluSc SINE Alu -11 298 1 5147 19 0 0 chr5 4067856 4068468 -199017064 + L1PA3 LINE L1 5568 6179 0 212 328 23 23 chr5 4068499 4068627 -199016905 + MIR3 SINE MIR 71 198 -10 1904 93 9 102 chr5 4069215 4069537 -199015995 + AluSc SINE Alu 1 292 -17 909 203 190 7 chr5 4069569 4069859 -199015673 - MLT1B LTR MaLR -41 349 7 276 172 0 0 chr5 4069989 4070047 -199015485 + (CA)n Simple_repeat Simple_repeat 1 58 0 2502 77 0 0 chr5 4070217 4070528 -199015004 - AluY SINE Alu 0 311 1 230 300 0 29 chr5 4071128 4071198 -199014334 - L2 LINE L2 0 3313 3246 486 210 5 38 chr5 4071360 4071546 -199013986 + (CATATA)n Simple_repeat Simple_repeat 1 180 0 369 224 21 32 chr5 4071547 4071834 -199013698 + (CA)n Simple_repeat Simple_repeat 1 283 0 333 304 8 16 chr5 4071845 4071970 -199013562 + (CA)n Simple_repeat Simple_repeat 2 125 0 240 226 23 23 chr5 4072187 4072320 -199013212 + (CATA)n Simple_repeat Simple_repeat 2 134 0 1960 208 16 33 chr5 4073489 4073519 -199012013 + L1MB5 LINE L1 5585 5614 -560 2386 125 11 24 chr5 4073519 4073888 -199011644 - THE1B LTR MaLR 0 364 1 1960 208 16 33 chr5 4073888 4074428 -199011104 + L1MB5 LINE L1 5614 6145 -29 315 219 25 12 chr5 4074467 4074627 -199010905 + CT-rich Low_complexity Low_complexity 2 163 0 1263 199 69 0 chr5 4074636 4074882 -199010650 + AluJo SINE Alu 25 287 -25 258 116 0 0 chr5 4074902 4074945 -199010587 + L1MB5 LINE L1 6126 6168 -6 183 129 0 0 chr5 4075077 4075108 -199010424 + (TTTTTG)n Simple_repeat Simple_repeat 6 36 0 393 215 23 11 chr5 4076259 4076436 -199009096 + CT-rich Low_complexity Low_complexity 1 179 0 667 184 0 16 chr5 4076452 4076824 -199008708 + CT-rich Low_complexity Low_complexity 1 365 0 389 36 18 0 chr5 4078497 4078552 -199006980 + (CA)n Simple_repeat Simple_repeat 2 57 0 683 251 73 71 chr5 4080241 4080652 -199004880 - L1MD2 LINE L1 -245 6048 5637 200 245 9 0 chr5 4080674 4080780 -199004752 + (TA)n Simple_repeat Simple_repeat 1 107 0 346 279 0 0 chr5 4080781 4080867 -199004665 + L1MC4 LINE L1 6616 6701 -1341 1208 218 97 15 chr5 4080868 4081395 -199004137 - L1MD2 LINE L1 -668 5625 5071 1746 263 96 43 chr5 4081498 4082781 -199002751 - L1MD2 LINE L1 -2880 3200 1771 288 77 0 0 chr5 4082781 4082820 -199002712 + (TG)n Simple_repeat Simple_repeat 2 40 0 1746 263 96 43 chr5 4082820 4083626 -199001906 - L1MD2 LINE L1 -4309 1771 1009 794 254 57 19 chr5 4083627 4083978 -199001554 - L1MD2 LINE L1 -5180 903 540 250 322 7 33 chr5 4084044 4084196 -199001336 + L1ME1 LINE L1 278 425 -6138 462 278 82 26 chr5 4084424 4084738 -199000794 + L1ME1 LINE L1 1368 1849 -4714 234 150 0 0 chr5 4084714 4084754 -199000778 + L1ME1 LINE L1 2940 2979 -3403 * 1969 122 45 0 chr5 4084789 4085077 -199000455 + AluSq SINE Alu 1 301 -12 312 247 0 0 chr5 4085124 4085209 -199000323 + L1ME1 LINE L1 4800 4884 -1498 8208 124 22 12 chr5 4085221 4085387 -199000145 + L1PA10 LINE L1 4033 4196 -1972 1576 112 8 48 chr5 4085387 4085636 -198999896 + AluSc SINE Alu 63 301 -8 8208 124 22 12 chr5 4085636 4086802 -198998730 + L1PA10 LINE L1 4196 5382 -786 2846 13 0 0 chr5 4086802 4087115 -198998417 + AluYb8 SINE Alu 2 314 -4 8208 124 22 12 chr5 4087115 4087899 -198997633 + L1PA10 LINE L1 5382 6157 -11 21 0 0 0 chr5 4087907 4087928 -198997604 + AT_rich Low_complexity Low_complexity 1 21 0 1207 242 34 24 chr5 4087928 4088423 -198997109 + L1ME1 LINE L1 4879 5378 -1004 * 1821 198 21 7 chr5 4088421 4088846 -198996686 + L1MC3 LINE L1 7335 7765 -20 2707 228 78 24 chr5 4088871 4089847 -198995685 + L1ME1 LINE L1 5358 6398 -4 2895 13 0 0 chr5 4089852 4090170 -198995362 - AluYb8 SINE Alu 0 318 1 219 69 0 0 chr5 4091539 4091568 -198993964 + (TA)n Simple_repeat Simple_repeat 2 30 0 312 70 0 0 chr5 4092494 4092537 -198992995 + (TG)n Simple_repeat Simple_repeat 2 44 0 1066 271 12 12 chr5 4093357 4093697 -198991835 - MER58B DNA MER1_type 0 341 2 243 0 0 0 chr5 4096417 4096444 -198989088 + (A)n Simple_repeat Simple_repeat 1 27 0 551 290 70 25 chr5 4096783 4096983 -198988549 - MIR SINE MIR -3 259 51 267 161 0 0 chr5 4099411 4099467 -198986065 + (TG)n Simple_repeat Simple_repeat 1 56 0 298 256 0 13 chr5 4101049 4101127 -198984405 + GA-rich Low_complexity Low_complexity 2 78 0 186 103 0 0 chr5 4102428 4102457 -198983075 + (GAAAA)n Simple_repeat Simple_repeat 2 30 0 2394 119 31 88 chr5 4103730 4104184 -198981348 - MSTA LTR MaLR 0 428 1 282 219 0 0 chr5 4107625 4107689 -198977843 + (CA)n Simple_repeat Simple_repeat 1 64 0 1322 163 23 62 chr5 4108679 4108985 -198976547 + L1MA9 LINE L1 6013 6306 -6 1233 245 71 31 chr5 4109998 4110447 -198975085 + MLT1C LTR MaLR 1 467 0 2006 130 0 3 chr5 4111876 4112175 -198973357 - AluSc SINE Alu -11 298 1 2938 192 11 5 chr5 4112289 4112861 -198972671 + L1MA8 LINE L1 5344 5918 -373 1403 197 11 28 chr5 4112969 4113253 -198972279 - MLT2B1 LTR ERVL -240 280 2 327 49 0 0 chr5 4114683 4114724 -198970808 + (CA)n Simple_repeat Simple_repeat 2 42 0 2095 114 0 7 chr5 4115766 4116072 -198969460 + AluSq SINE Alu 1 304 -9 21 0 0 0 chr5 4116572 4116593 -198968939 + AT_rich Low_complexity Low_complexity 1 21 0 306 227 0 13 chr5 4117938 4118013 -198967519 + MER116 DNA Mariner 1 74 -6 22 0 0 0 chr5 4120074 4120096 -198965436 + AT_rich Low_complexity Low_complexity 1 22 0 651 243 82 19 chr5 4120745 4120951 -198964581 + MER20 DNA MER1_type 1 219 0 281 273 71 71 chr5 4121304 4121487 -198964045 - MIR3 SINE MIR -25 183 1 3676 29 29 43 chr5 4122018 4122502 -198963030 + L1PA6 LINE L1 5677 6153 -1 1337 166 166 36 chr5 4124955 4125287 -198960245 + THE1C LTR MaLR 1 375 0 222 286 0 0 chr5 4126827 4126876 -198958656 + L2 LINE L2 3248 3296 -17 198 171 0 0 chr5 4128364 4128405 -198957127 + (CA)n Simple_repeat Simple_repeat 2 42 0 256 341 0 0 chr5 4128589 4128680 -198956852 + (CATATA)n Simple_repeat Simple_repeat 2 92 0 516 303 89 62 chr5 4128950 4129333 -198956199 + L1M4 LINE L1 4157 4553 -1593 2076 129 0 0 chr5 4129333 4129636 -198955896 + AluSx SINE Alu 1 303 -9 516 303 89 62 chr5 4129636 4129668 -198955864 + L1M4 LINE L1 4553 4583 -1563 520 261 58 22 chr5 4129768 4129906 -198955626 - MIR SINE MIR -22 240 98 587 310 67 8 chr5 4133191 4133430 -198952102 - MIR SINE MIR -9 253 1 9715 179 76 56 chr5 4133803 4136296 -198949236 + L1MCa LINE L1 17 2559 -3867 1705 131 27 0 chr5 4136303 4136562 -198948970 + AluSq SINE Alu 34 299 -14 6554 172 8 26 chr5 4136569 4137723 -198947809 + L1P LINE L1 3284 4414 -1732 2071 137 0 3 chr5 4137723 4138037 -198947495 + AluSq SINE Alu 1 313 0 6554 172 8 26 chr5 4138037 4138178 -198947354 + L1P LINE L1 4414 4556 -1590 402 236 27 0 chr5 4138283 4138393 -198947139 - L1ME3 LINE L1 -318 5844 5732 1612 227 16 68 chr5 4138396 4138881 -198946651 - L1ME2 LINE L1 -306 5858 5399 731 193 47 23 chr5 4138883 4139054 -198946478 + MLT1H LTR MaLR 2 176 -373 1105 189 84 17 chr5 4139075 4139371 -198946161 - L1 LINE L1 -745 5401 5086 257 337 37 6 chr5 4139514 4139677 -198945855 - L2 LINE L2 -663 2651 2484 1821 138 97 13 chr5 4139770 4140081 -198945451 - MER1B DNA MER1_type 0 337 1 303 286 23 12 chr5 4141077 4141248 -198944284 - L1M4 LINE L1 -3136 3010 2838 * 765 179 14 0 chr5 4141247 4141387 -198944145 - L1ME2 LINE L1 -9 6155 6014 2217 108 0 0 chr5 4141623 4141928 -198943604 + AluSx SINE Alu 1 305 -7 297 281 67 76 chr5 4141933 4142157 -198943375 + MLT1J LTR MaLR 108 329 -182 1676 235 57 17 chr5 4142495 4143126 -198942406 + L1 LINE L1 4316 4990 -1156 2043 101 0 14 chr5 4143127 4143415 -198942117 + AluSc SINE Alu 1 284 -25 382 130 0 0 chr5 4143516 4143570 -198941962 + MER68 LTR ERV1 168 221 -341 1712 179 88 18 chr5 4143570 4143738 -198941794 + MSTB1 LTR MaLR 15 170 -262 186 43 0 0 chr5 4143738 4143761 -198941771 + (TTCCC)n Simple_repeat Simple_repeat 1 23 0 1712 179 88 18 chr5 4143761 4143932 -198941600 + MSTB1 LTR MaLR 170 378 -54 2160 121 0 3 chr5 4143933 4144238 -198941294 - AluSx SINE Alu -7 305 2 591 203 73 0 chr5 4144241 4144364 -198941168 + MER68 LTR ERV1 431 562 0 205 338 62 33 chr5 4144408 4144648 -198940884 + L2 LINE L2 2625 2871 -443 210 253 101 40 chr5 4145615 4145714 -198939818 + L2 LINE L2 3192 3296 -17 1795 168 3 3 chr5 4145733 4146037 -198939495 + AluJb SINE Alu 1 304 -8 2343 163 46 6 chr5 4146729 4147590 -198937942 - L1M1 LINE L1 -522 5781 4885 2146 145 62 31 chr5 4148048 4148468 -198937064 + Tigger2a DNA MER2_type 2 434 0 38 68 0 0 chr5 4149071 4149144 -198936388 + GC_rich Low_complexity Low_complexity 1 73 0 256 341 0 0 chr5 4149489 4149580 -198935952 + (CATATA)n Simple_repeat Simple_repeat 2 92 0 307 310 99 55 chr5 4149850 4150234 -198935298 + L1M4 LINE L1 4157 4557 -1589 594 112 119 0 chr5 4150235 4150378 -198935154 + AluSx SINE Alu 2 161 -151 256 149 15 30 chr5 4150644 4150711 -198934821 + GA-rich Low_complexity Low_complexity 3 68 0 232 328 0 0 chr5 4150894 4150958 -198934574 + MIR SINE MIR 45 108 -154 2933 112 18 7 chr5 4152217 4152665 -198932867 + L1PA11 LINE L1 5720 6172 -2 549 158 15 0 chr5 4152688 4152887 -198932645 + L1MA4A LINE L1 6037 6299 -4 1197 130 0 5 chr5 4154005 4154189 -198931343 + AluSg/x SINE Alu 121 303 -9 2215 90 0 10 chr5 4154192 4154492 -198931040 + AluSg1 SINE Alu 12 308 -1 192 125 0 0 chr5 4154517 4154549 -198930983 + (TA)n Simple_repeat Simple_repeat 2 33 0 212 220 0 20 chr5 4154687 4154737 -198930795 + (TA)n Simple_repeat Simple_repeat 2 50 0 1696 125 0 4 chr5 4155065 4155313 -198930219 - AluSx SINE Alu -17 295 49 1579 159 0 51 chr5 4155606 4155920 -198929612 - AluJo SINE Alu -14 298 1 219 343 71 10 chr5 4156561 4156660 -198928872 + L2 LINE L2 3162 3266 -6 2243 100 0 0 chr5 4156737 4157037 -198928495 + AluSx SINE Alu 1 300 -12 2307 89 0 0 chr5 4157599 4157903 -198927629 - AluSx SINE Alu -8 304 1 2055 178 40 40 chr5 4158802 4159197 -198926335 - LTR24C LTR ERV1 -204 431 34 1449 192 7 23 chr5 4159197 4159499 -198926033 - AluJo SINE Alu -15 297 1 2055 178 40 40 chr5 4159499 4159530 -198926002 - LTR24C LTR ERV1 -600 35 5 1023 207 81 54 chr5 4159531 4159826 -198925706 + LTR16A1 LTR ERVL 100 402 -55 183 80 0 0 chr5 4160022 4160047 -198925485 + (ATG)n Simple_repeat Simple_repeat 2 26 0 803 146 0 31 chr5 4160071 4160201 -198925331 - FLAM_C SINE Alu -6 127 2 2247 144 11 0 chr5 4160655 4161003 -198924529 + L1PA12 LINE L1 5569 5920 -248 2196 102 0 0 chr5 4161003 4161297 -198924235 - AluSx SINE Alu -18 294 1 1242 155 81 27 chr5 4161319 4161577 -198923955 - L1MA9 LINE L1 -8 6304 6033 512 146 42 62 chr5 4161578 4161612 -198923920 - Tigger3(Golem) DNA MER2_type -511 2518 2485 865 94 0 36 chr5 4161612 4161750 -198923782 - FLAM_C SINE Alu 0 133 1 512 146 42 62 chr5 4161750 4161842 -198923690 - Tigger3(Golem) DNA MER2_type -544 2485 2393 2087 106 3 7 chr5 4161842 4162144 -198923388 - AluSq SINE Alu -12 301 1 512 146 42 62 chr5 4162144 4162160 -198923372 - Tigger3(Golem) DNA MER2_type -636 2393 2378 293 237 32 21 chr5 4162168 4162261 -198923271 - Tigger3(Golem) DNA MER2_type -2879 150 57 1138 212 73 64 chr5 4162636 4162994 -198922538 - MLT1A2 LTR MaLR -13 361 1 2174 153 18 45 chr5 4163036 4163210 -198922322 + MLT1B LTR MaLR 1 178 -212 2477 102 123 5 chr5 4163210 4163592 -198921940 - MSTA LTR MaLR -1 427 1 2174 153 18 45 chr5 4163592 4163816 -198921716 + MLT1B LTR MaLR 178 388 -2 499 244 42 0 chr5 4163816 4163935 -198921597 + MER20 DNA MER1_type 84 207 -12 2300 97 0 0 chr5 4164202 4164511 -198921021 + AluSx SINE Alu 1 309 -3 2520 46 0 0 chr5 4164659 4164964 -198920568 + AluY SINE Alu 1 305 -6 1329 176 24 41 chr5 4165093 4165388 -198920144 - AluJo SINE Alu -22 290 1 287 297 169 17 chr5 4167120 4167238 -198918294 - L2 LINE L2 0 3272 3137 2005 129 0 3 chr5 4167627 4167922 -198917610 - AluSx SINE Alu -18 294 1 1446 211 91 21 chr5 4167934 4168318 -198917214 - MLT1C LTR MaLR -56 411 1 1690 154 58 141 chr5 4168318 4168765 -198916767 - MLT1C-int LTR MaLR 0 1371 962 1648 174 3 13 chr5 4169108 4169407 -198916125 + AluJo SINE Alu 1 296 -16 1755 181 85 30 chr5 4169605 4170041 -198915491 + MLT1C LTR MaLR 1 460 -7 2437 176 18 31 chr5 4170380 4170612 -198914920 - L1P4 LINE L1 -456 5710 5477 1811 183 0 6 chr5 4170612 4170924 -198914608 - AluJo SINE Alu -2 310 1 2437 176 18 31 chr5 4170924 4171593 -198913939 - L1P4 LINE L1 -689 5477 4823 232 189 0 38 chr5 4171810 4171863 -198913669 + CT-rich Low_complexity Low_complexity 4 54 0 1565 185 3 20 chr5 4172287 4172395 -198913137 + AluSx SINE Alu 5 113 -199 2260 107 51 23 chr5 4172395 4172749 -198912783 + THE1B LTR MaLR 1 364 0 1565 185 3 20 chr5 4172749 4172932 -198912600 + AluSx SINE Alu 113 291 -21 941 172 0 0 chr5 4173115 4173272 -198912260 + MLT1B LTR MaLR 192 348 -42 1084 216 194 14 chr5 4173376 4173741 -198911791 + MER74B LTR ERVL 192 622 0 2602 83 13 44 chr5 4173837 4174004 -198911528 + THE1C LTR MaLR 1 172 -203 2348 40 13 3 chr5 4174004 4174302 -198911230 - AluY SINE Alu -10 301 1 2602 83 13 44 chr5 4174302 4174521 -198911011 + THE1C LTR MaLR 172 375 0 1534 180 7 26 chr5 4174685 4174991 -198910541 - AluJo SINE Alu -12 300 1 1015 177 4 44 chr5 4175780 4176006 -198909526 + AluJo SINE Alu 87 303 -9 523 186 88 0 chr5 4176076 4176189 -198909343 + HAL1 LINE L1 1631 1753 -754 2089 124 3 0 chr5 4177093 4177399 -198908133 - AluSx SINE Alu -5 307 1 1728 129 0 15 chr5 4177408 4177672 -198907860 - AluSx SINE Alu -11 301 42 1031 166 0 0 chr5 4178417 4178592 -198906940 + FRAM SINE Alu 1 172 -4 607 166 31 43 chr5 4178592 4178739 -198906793 - MER3 DNA MER1_type -81 128 1 2296 82 10 3 chr5 4178777 4179083 -198906449 + AluSx SINE Alu 1 308 -4 780 217 12 6 chr5 4179328 4179489 -198906043 - MER58A DNA MER1_type -32 192 31 2026 121 27 0 chr5 4180483 4180780 -198904752 + AluSx SINE Alu 1 305 -7 1412 155 64 4 chr5 4180783 4181047 -198904485 - L1MB7 LINE L1 -22 6162 5883 1388 221 105 41 chr5 4181056 4181323 -198904209 - MSTD LTR MaLR -11 385 88 1448 123 0 120 chr5 4181323 4181664 -198903868 - AluSg SINE Alu 0 300 1 1388 221 105 41 chr5 4181664 4181758 -198903774 - MSTD LTR MaLR -308 88 1 1863 168 10 54 chr5 4181758 4181977 -198903555 - L1MB7 LINE L1 -291 5893 5697 1845 161 3 0 chr5 4181977 4182288 -198903244 - AluJo SINE Alu 0 312 1 1863 168 10 54 chr5 4182288 4182456 -198903076 - L1MB7 LINE L1 -487 5697 5523 284 0 28 0 chr5 4182557 4182593 -198902939 + (GAAA)n Simple_repeat Simple_repeat 4 40 0 258 312 74 40 chr5 4182835 4183037 -198902495 - MIR SINE MIR -7 255 47 30 45 0 0 chr5 4184075 4184119 -198901413 + AT_rich Low_complexity Low_complexity 1 44 0 3530 192 41 15 chr5 4184185 4184936 -198900596 - L1MA9 LINE L1 -38 6274 5504 266 225 14 14 chr5 4185444 4185515 -198900017 + MER103 DNA DNA 16 86 -80 522 280 108 20 chr5 4186142 4186392 -198899140 - L2 LINE L2 0 3313 3042 1586 266 132 48 chr5 4186524 4187018 -198898514 + MER69B DNA AcHobo 173 624 -1902 2138 69 49 0 chr5 4187018 4187306 -198898226 - AluY SINE Alu -9 302 1 1586 266 132 48 chr5 4187306 4187741 -198897791 + MER69B DNA AcHobo 624 1180 -46 2069 137 39 28 chr5 4187944 4188381 -198897151 + L1PA16 LINE L1 5725 6166 0 2084 139 0 0 chr5 4188487 4188797 -198896735 - AluSg SINE Alu 0 310 1 217 380 10 0 chr5 4190550 4190650 -198894882 + MIR SINE MIR 156 256 -6 2131 125 24 40 chr5 4191167 4191544 -198893988 + THE1C LTR MaLR 3 373 -2 1308 223 3 25 chr5 4194227 4194596 -198890936 + AluJb SINE Alu 1 362 0 1321 139 9 5 chr5 4194713 4194929 -198890603 + AluSq SINE Alu 97 313 0 2495 159 10 18 chr5 4194930 4195421 -198890111 + L1PA11 LINE L1 4416 4902 -1244 1852 130 3 0 chr5 4195421 4195706 -198889826 - AluSx SINE Alu 0 312 27 6162 109 3 14 chr5 4195752 4197027 -198888505 + L1PA11 LINE L1 4894 6161 -13 2148 274 85 15 chr5 4197074 4198243 -198887289 + L1MC1 LINE L1 2207 3456 -2690 341 280 21 0 chr5 4198253 4198346 -198887186 + MER2 DNA MER2_type 1 95 -250 224 185 31 0 chr5 4198350 4198415 -198887117 + (TA)n Simple_repeat Simple_repeat 1 67 0 367 186 0 0 chr5 4198505 4198564 -198886968 - MER2 DNA MER2_type -286 59 1 * 448 241 154 23 chr5 4198564 4198783 -198886749 + MER2 DNA MER2_type 97 344 -1 212 161 48 0 chr5 4199315 4199377 -198886155 + (TA)n Simple_repeat Simple_repeat 1 65 0 359 203 0 0 chr5 4199467 4199526 -198886006 - MER2 DNA MER2_type -286 59 1 * 420 241 176 23 chr5 4199526 4199741 -198885791 + MER2 DNA MER2_type 97 344 -1 4929 237 24 30 chr5 4199749 4201198 -198884334 + L1MC1 LINE L1 3480 4919 -1227 3833 190 44 17 chr5 4201204 4202161 -198883371 + L1MC1 LINE L1 5083 6063 -270 478 258 33 0 chr5 4202170 4202290 -198883242 - MER69 DNA AcHobo -1064 162 39 455 167 20 0 chr5 4206071 4206269 -198879263 - L1MA4A LINE L1 -4 6299 6037 2293 114 2 48 chr5 4206396 4206816 -198878716 - L1PA11 LINE L1 -54 6120 5720 * 3886 173 11 7 chr5 4206815 4206846 -198878686 - L1MA4A LINE L1 -265 6038 6009 1462 163 37 55 chr5 4206846 4207227 -198878305 + THE1C LTR MaLR 1 374 -1 3886 173 11 7 chr5 4207227 4208341 -198877191 - L1MA4A LINE L1 -294 6009 4885 2265 107 3 3 chr5 4212090 4212389 -198873143 + AluSq SINE Alu 1 299 -14 479 280 81 5 chr5 4212811 4212997 -198872535 + MER3 DNA MER1_type 6 205 -4 739 160 35 0 chr5 4213227 4213486 -198872046 + (TCTA)n Simple_repeat Simple_repeat 1 268 0 336 323 134 8 chr5 4213487 4213859 -198871673 + L1ME4a LINE L1 5555 5973 -148 4214 180 42 37 chr5 4216161 4217540 -198867992 + L1MA7 LINE L1 4901 6290 -1 552 306 69 26 chr5 4217756 4218145 -198867387 - MLT1I LTR MaLR -3 406 1 574 284 101 45 chr5 4218173 4218528 -198867004 + MLT1L LTR MaLR 241 615 0 883 295 157 14 chr5 4220198 4220625 -198864907 + MLT1D LTR MaLR 1 488 -17 2574 153 0 16 chr5 4222206 4222637 -198862895 + MSTA LTR MaLR 1 424 -4 666 189 0 0 chr5 4222659 4222770 -198862762 + FLAM_C SINE Alu 5 115 -18 413 19 19 0 chr5 4222789 4222843 -198862689 + (TAGA)n Simple_repeat Simple_repeat 3 57 0 279 0 0 0 chr5 4222842 4222873 -198862659 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 234 0 0 0 chr5 4222872 4222898 -198862634 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 243 0 0 0 chr5 4222897 4222924 -198862608 + (GA)n Simple_repeat Simple_repeat 2 28 0 340 347 34 29 chr5 4223607 4223846 -198861686 + L1MC4a LINE L1 5645 5884 -1924 373 303 23 8 chr5 4224381 4224513 -198861019 + MER94 DNA DNA 1 134 0 269 276 17 60 chr5 4224577 4224693 -198860839 + L2 LINE L2 3203 3313 0 280 344 104 6 chr5 4225025 4225188 -198860344 + MER5A DNA MER1_type 7 185 -4 1278 228 155 54 chr5 4225935 4226361 -198859171 + MLT2B1 LTR ERVL 2 470 -50 258 91 91 0 chr5 4226397 4226441 -198859091 + MLT2D LTR ERVL 367 414 0 305 254 155 21 chr5 4228403 4228480 -198857052 - LTR50 LTR ERVL -2 793 728 1884 211 30 30 chr5 4228480 4228944 -198856588 + MLT1C LTR MaLR 4 467 0 305 254 155 21 chr5 4228944 4229059 -198856473 - LTR50 LTR ERVL -67 728 575 516 294 21 6 chr5 4229791 4229971 -198855561 + MLT1B LTR MaLR 189 382 -8 21 57 0 0 chr5 4231757 4231792 -198853740 + AT_rich Low_complexity Low_complexity 1 35 0 194 0 39 0 chr5 4232142 4232168 -198853364 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 210 265 0 36 chr5 4234877 4234960 -198850572 + C-rich Low_complexity Low_complexity 4 83 0 183 176 29 15 chr5 4238394 4238462 -198847070 + G-rich Low_complexity Low_complexity 3 71 0 29 28 0 0 chr5 4238633 4238669 -198846863 + GC_rich Low_complexity Low_complexity 1 36 0 36 102 0 0 chr5 4238816 4238943 -198846589 + GC_rich Low_complexity Low_complexity 1 127 0 224 149 21 0 chr5 4241824 4241871 -198843661 + CT-rich Low_complexity Low_complexity 1 48 0 25 65 0 0 chr5 4242630 4242676 -198842856 + GC_rich Low_complexity Low_complexity 1 46 0 291 113 0 0 chr5 4244115 4244168 -198841364 + (TG)n Simple_repeat Simple_repeat 1 53 0 235 291 0 29 chr5 4245614 4245717 -198839815 + (CGGGG)n Simple_repeat Simple_repeat 5 104 0 692 244 122 13 chr5 4248658 4248888 -198836644 - ORSL DNA AcHobo -17 258 4 311 0 26 0 chr5 4249740 4249779 -198835753 + (TG)n Simple_repeat Simple_repeat 2 41 0 21 0 0 0 chr5 4250279 4250300 -198835232 + AT_rich Low_complexity Low_complexity 1 21 0 194 62 31 0 chr5 4252979 4253011 -198832521 + (TG)n Simple_repeat Simple_repeat 1 33 0 371 254 59 25 chr5 4253144 4253262 -198832270 - MER5A DNA MER1_type -35 154 33 22 35 0 0 chr5 4253975 4254004 -198831528 + AT_rich Low_complexity Low_complexity 1 29 0 2158 127 0 19 chr5 4254324 4254639 -198830893 + AluSx SINE Alu 1 309 -3 479 94 0 0 chr5 4254697 4254761 -198830771 - AluSq/x SINE Alu -184 129 66 542 151 0 0 chr5 4254862 4254948 -198830584 + AluSg/x SINE Alu 213 298 -12 1496 174 89 11 chr5 4257199 4257480 -198828052 - AluJo SINE Alu -3 309 7 416 291 135 38 chr5 4257808 4258148 -198827384 + L3 LINE CR1 1204 1576 -1 540 258 56 50 chr5 4263719 4263917 -198821615 + MER20 DNA MER1_type 17 215 -4 277 176 69 98 chr5 4264462 4264564 -198820968 + MIR SINE MIR 38 136 -72 198 103 0 0 chr5 4266739 4266768 -198818764 + (TA)n Simple_repeat Simple_repeat 1 29 0 351 326 40 0 chr5 4266881 4267105 -198818427 + L1ME4a LINE L1 5710 5942 -179 2297 125 8 40 chr5 4267929 4268305 -198817227 - THE1B LTR MaLR 0 364 1 1998 157 3 6 chr5 4268986 4269299 -198816233 - AluJb SINE Alu 0 312 1 775 311 136 44 chr5 4270315 4271374 -198814158 + L2 LINE L2 1478 2633 -681 189 0 0 0 chr5 4271477 4271498 -198814034 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 541 187 60 26 chr5 4271636 4271905 -198813627 + MLT1A1 LTR MaLR 12 353 -12 228 310 60 69 chr5 4272134 4272250 -198813282 - MIR SINE MIR -88 174 60 336 270 173 9 chr5 4272259 4272577 -198812955 - LTR16A LTR ERVL -15 435 66 288 0 0 0 chr5 4274123 4274155 -198811377 + (GA)n Simple_repeat Simple_repeat 1 32 0 204 129 81 16 chr5 4274483 4274545 -198810987 + CT-rich Low_complexity Low_complexity 2 67 0 403 209 18 0 chr5 4274659 4274769 -198810763 + CT-rich Low_complexity Low_complexity 4 115 0 304 264 19 38 chr5 4274782 4274888 -198810644 - L1M4 LINE L1 -2962 3184 3081 234 0 0 0 chr5 4274889 4274915 -198810617 + (TC)n Simple_repeat Simple_repeat 1 26 0 1487 194 33 33 chr5 4274917 4275216 -198810316 - AluJb SINE Alu -12 300 2 194 318 15 15 chr5 4275848 4275914 -198809618 - L2 LINE L2 -3 3269 3204 198 305 19 110 chr5 4275943 4276016 -198809516 + L2 LINE L2 2453 2507 -807 1977 113 0 39 chr5 4276016 4276322 -198809210 - AluSc SINE Alu 0 303 9 198 305 19 110 chr5 4276322 4276401 -198809131 + L2 LINE L2 2507 2592 -722 1711 158 15 75 chr5 4277273 4277457 -198808075 + MLT1B LTR MaLR 1 148 -242 2298 88 0 14 chr5 4277457 4277754 -198807778 + AluY SINE Alu 1 293 -18 1711 158 15 75 chr5 4277754 4277980 -198807552 + MLT1B LTR MaLR 148 386 -4 1402 211 62 9 chr5 4278407 4278743 -198806789 + MLT1A1 LTR MaLR 12 365 0 734 222 48 0 chr5 4278793 4278982 -198806550 + L1MC1 LINE L1 6129 6326 -7 576 289 10 102 chr5 4280038 4280936 -198804596 + TAR1 Satellite telomeric 1 816 -777 442 263 70 36 chr5 4281241 4281469 -198804063 - MLT1D LTR MaLR 0 467 261 1852 204 13 35 chr5 4281519 4281970 -198803562 - L1MB1 LINE L1 -39 6129 5689 433 244 19 39 chr5 4281966 4282167 -198803365 + L1M4c LINE L1 2163 2365 -3781 * 344 167 0 0 chr5 4282150 4282216 -198803316 + L1M2 LINE L1 5590 5655 -636 * 2048 152 0 10 chr5 4282246 4282548 -198802984 - AluSx SINE Alu -13 299 1 525 222 58 58 chr5 4282553 4282742 -198802790 - MLT1D LTR MaLR -313 192 4 2211 100 14 0 chr5 4283129 4283420 -198802112 - AluSc SINE Alu -14 295 1 326 262 6 139 chr5 4283718 4283890 -198801642 - MER5A DNA MER1_type -2 187 39 1822 189 23 30 chr5 4341087 4341695 -198743837 + L1MA8 LINE L1 4306 4990 -1156 1776 103 0 8 chr5 4341696 4341938 -198743594 + AluSc SINE Alu 1 240 -69 2182 108 0 3 chr5 4342105 4342411 -198743121 - AluSx SINE Alu -7 305 1 765 179 14 0 chr5 4342648 4342788 -198742744 + L1ME2 LINE L1 6014 6155 -9 378 277 25 25 chr5 4342787 4342989 -198742543 + L1M4c LINE L1 2838 3039 -3107 * 1296 175 0 87 chr5 4343977 4344311 -198741221 + L1MA8 LINE L1 5560 5866 -296 389 218 120 8 chr5 4344306 4344677 -198740855 + L1ME1 LINE L1 5732 6154 -12 * 243 103 0 0 chr5 4344694 4344733 -198740799 + (A)n Simple_repeat Simple_repeat 1 39 0 550 286 52 31 chr5 4344777 4344969 -198740563 + MIR SINE MIR 67 262 0 587 294 102 55 chr5 4344992 4345336 -198740196 + L1M4 LINE L1 2376 2735 -3411 201 240 93 27 chr5 4346778 4346853 -198738679 + L2 LINE L2 3192 3271 -42 1795 168 3 3 chr5 4346988 4347292 -198738240 + AluJb SINE Alu 1 304 -8 303 280 0 0 chr5 4348267 4348410 -198737122 + (CA)n Simple_repeat Simple_repeat 2 144 0 213 39 0 0 chr5 4348485 4348511 -198737021 + (CA)n Simple_repeat Simple_repeat 1 26 0 1149 177 111 46 chr5 4348612 4348963 -198736569 - MLT1C LTR MaLR -93 374 1 1648 174 3 13 chr5 4349161 4349460 -198736072 - AluJo SINE Alu -16 296 1 1803 154 59 131 chr5 4349777 4350219 -198735313 + MLT1C-int LTR MaLR 962 1371 0 1398 206 88 28 chr5 4350219 4350607 -198734925 + MLT1C LTR MaLR 1 411 -56 2096 128 0 10 chr5 4350619 4350917 -198734615 + AluSx SINE Alu 1 295 -17 242 303 160 17 chr5 4351309 4351428 -198734104 + L2 LINE L2 3137 3272 0 1571 125 79 0 chr5 4351488 4351728 -198733804 - AluJo SINE Alu -23 289 31 1224 171 18 0 chr5 4351764 4351981 -198733551 + MER68 LTR ERV1 1 221 -341 1629 182 90 18 chr5 4351981 4352149 -198733383 + MSTB1 LTR MaLR 15 170 -262 186 43 0 0 chr5 4352149 4352172 -198733360 + (TTCCC)n Simple_repeat Simple_repeat 1 23 0 1629 182 90 18 chr5 4352172 4352338 -198733194 + MSTB1 LTR MaLR 170 373 -59 2318 126 0 3 chr5 4352339 4352649 -198732883 - AluSx SINE Alu -2 310 2 570 203 73 0 chr5 4352652 4352775 -198732757 + MER68 LTR ERV1 431 562 0 212 377 50 23 chr5 4352819 4353161 -198732371 + L2 LINE L2 2625 2975 -339 270 30 0 0 chr5 4353229 4353262 -198732270 + MER20 DNA MER1_type 25 57 -162 1200 236 76 22 chr5 4353274 4353630 -198731902 - MLT1B LTR MaLR -15 375 1 2074 160 10 38 chr5 4353672 4353846 -198731686 + MLT1B LTR MaLR 1 178 -212 2347 102 123 5 chr5 4353846 4354228 -198731304 - MSTA LTR MaLR -1 427 1 2074 160 10 38 chr5 4354228 4354452 -198731080 + MLT1B LTR MaLR 178 388 -2 491 244 42 0 chr5 4354452 4354571 -198730961 + MER20 DNA MER1_type 84 207 -12 2465 97 0 0 chr5 4354838 4355147 -198730385 + AluSx SINE Alu 1 309 -3 2715 45 0 0 chr5 4355295 4355604 -198729928 + AluY SINE Alu 1 309 -2 1568 167 24 37 chr5 4355729 4356023 -198729509 - AluJo SINE Alu -22 290 1 390 325 131 0 chr5 4356912 4357118 -198728414 - L2 LINE L2 -595 2719 2487 1726 142 97 13 chr5 4357215 4357526 -198728006 - MER1B DNA MER1_type 0 337 1 1815 175 3 20 chr5 4358207 4358315 -198727217 + AluSx SINE Alu 5 113 -199 2108 107 51 25 chr5 4358315 4358670 -198726862 + THE1B LTR MaLR 1 364 0 1815 175 3 20 chr5 4358670 4358853 -198726679 + AluSx SINE Alu 113 291 -21 925 166 0 0 chr5 4359036 4359193 -198726339 + MLT1B LTR MaLR 192 348 -42 1064 223 195 11 chr5 4359297 4359661 -198725871 + MER74B LTR ERVL 192 622 0 2467 83 13 44 chr5 4359757 4359924 -198725608 + THE1C LTR MaLR 1 172 -203 2700 27 7 3 chr5 4359924 4360224 -198725308 - AluY SINE Alu -10 301 1 2467 83 13 44 chr5 4360224 4360443 -198725089 + THE1C LTR MaLR 172 375 0 1691 180 7 26 chr5 4360607 4360913 -198724619 - AluJo SINE Alu -12 300 1 1127 177 4 44 chr5 4361692 4361918 -198723614 + AluJo SINE Alu 87 303 -9 509 186 88 0 chr5 4361988 4362101 -198723431 + HAL1 LINE L1 1631 1753 -754 1759 156 0 51 chr5 4362825 4363139 -198722393 + AluJo SINE Alu 1 298 -14 1824 125 0 4 chr5 4363432 4363680 -198721852 + AluSx SINE Alu 49 295 -17 212 220 0 20 chr5 4364008 4364058 -198721474 + (TA)n Simple_repeat Simple_repeat 1 49 0 192 125 0 0 chr5 4364196 4364228 -198721304 + (TA)n Simple_repeat Simple_repeat 2 33 0 2371 90 0 10 chr5 4364253 4364553 -198720979 - AluSg1 SINE Alu -1 308 12 1276 129 0 0 chr5 4364556 4364726 -198720806 - AluSg/x SINE Alu -9 301 132 2263 92 45 3 chr5 4364726 4365018 -198720514 - AluSx SINE Alu -8 304 1 1955 186 12 49 chr5 4365180 4365461 -198720071 + L1MB7 LINE L1 5402 5667 -517 2007 161 3 0 chr5 4365461 4365772 -198719760 + AluJo SINE Alu 1 312 0 1955 186 12 49 chr5 4365772 4365991 -198719541 + L1MB7 LINE L1 5667 5893 -291 1346 227 106 28 chr5 4365991 4366085 -198719447 + MSTD LTR MaLR 1 86 -310 2359 112 0 0 chr5 4366085 4366390 -198719142 + AluSg SINE Alu 1 305 -5 1346 227 106 28 chr5 4366390 4366652 -198718880 + MSTD LTR MaLR 86 385 -11 1356 159 64 4 chr5 4366661 4366925 -198718607 + L1MB7 LINE L1 5883 6162 -22 2186 121 27 0 chr5 4366928 4367225 -198718307 - AluSx SINE Alu -7 305 1 749 217 12 6 chr5 4368219 4368380 -198717152 + MER58A DNA MER1_type 31 192 -32 2457 82 10 3 chr5 4368625 4368931 -198716601 - AluSx SINE Alu -4 308 1 593 177 41 48 chr5 4368969 4369116 -198716416 + MER3 DNA MER1_type 1 146 -63 1119 166 0 0 chr5 4369116 4369291 -198716241 - FRAM SINE Alu -4 172 1 1862 131 0 15 chr5 4370036 4370303 -198715229 + AluSx SINE Alu 42 304 -8 2251 124 3 0 chr5 4370309 4370615 -198714917 + AluSx SINE Alu 1 307 -5 196 369 63 9 chr5 4370957 4371068 -198714464 + L2 LINE L2 3191 3307 -6 2400 105 0 0 chr5 4371145 4371450 -198714082 + AluSx SINE Alu 1 305 -7 2473 89 0 0 chr5 4372008 4372312 -198713220 - AluSx SINE Alu -8 304 1 216 97 0 0 chr5 4372998 4373029 -198712503 + (CCGCG)n Simple_repeat Simple_repeat 1 31 0 2023 155 57 26 chr5 4373723 4374143 -198711389 - Tigger2a DNA MER2_type 0 434 2 819 208 0 7 chr5 4374394 4374543 -198710989 + Tigger3(Golem) DNA MER2_type 1 148 -2881 510 148 26 17 chr5 4374545 4374569 -198710963 + Tigger3(Golem) DNA MER2_type 2370 2392 -637 2244 106 3 7 chr5 4374569 4374871 -198710661 + AluSq SINE Alu 1 301 -12 510 148 26 17 chr5 4374871 4374961 -198710571 + Tigger3(Golem) DNA MER2_type 2392 2485 -544 822 94 0 36 chr5 4374963 4375101 -198710431 + FLAM_C SINE Alu 1 133 0 1432 139 51 0 chr5 4375121 4375394 -198710138 + L1MA9 LINE L1 6018 6304 -8 2358 99 0 0 chr5 4375416 4375710 -198709822 + AluSx SINE Alu 1 294 -18 2173 141 11 0 chr5 4375710 4376058 -198709474 - L1PA12 LINE L1 -248 5920 5569 768 146 0 31 chr5 4376512 4376642 -198708890 + FLAM_C SINE Alu 2 127 -6 183 80 0 0 chr5 4376666 4376691 -198708841 + (CAT)n Simple_repeat Simple_repeat 2 26 0 1072 216 69 69 chr5 4376886 4377182 -198708350 - LTR16A1 LTR ERVL -55 402 104 2987 174 37 29 chr5 4377182 4377213 -198708319 + LTR24C LTR ERV1 5 34 -601 1602 192 7 23 chr5 4377213 4377515 -198708017 + AluJo SINE Alu 1 297 -15 2987 174 37 29 chr5 4377515 4378109 -198707423 + LTR24C LTR ERV1 34 635 0 1072 216 69 69 chr5 4378109 4378159 -198707373 - LTR16A1 LTR ERVL -352 105 56 2285 104 0 3 chr5 4378394 4378693 -198706839 + AluSx SINE Alu 2 299 -13 271 204 0 0 chr5 4378710 4378759 -198706773 + L1MA7 LINE L1 6018 6066 -225 2254 110 3 0 chr5 4479012 4479320 -198606212 + AluSc SINE Alu 1 309 0 25 0 0 0 chr5 4479494 4479519 -198606013 + AT_rich Low_complexity Low_complexity 1 25 0 946 53 26 7 chr5 4479603 4479754 -198605778 + (TAGA)n Simple_repeat Simple_repeat 2 155 0 232 323 23 0 chr5 4479875 4480005 -198605527 - L2 LINE L2 -1635 1679 1547 208 143 0 0 chr5 4480282 4480317 -198605215 + (TTA)n Simple_repeat Simple_repeat 3 37 0 1079 258 31 17 chr5 4480655 4480942 -198604590 - L1MD1 LINE L1 -168 6074 5784 2128 243 92 66 chr5 4481643 4482714 -198602818 + L1ME2 LINE L1 5045 6156 -8 25 31 0 0 chr5 4482800 4482832 -198602700 + AT_rich Low_complexity Low_complexity 1 32 0 320 278 108 33 chr5 4482963 4483323 -198602209 + L1ME4a LINE L1 2200 2586 -3560 284 173 123 48 chr5 4483437 4483635 -198601897 + MER5C DNA MER1_type 47 323 -1 254 282 41 46 chr5 4483636 4483831 -198601701 + L1ME4a LINE L1 2689 2882 -3264 670 271 74 17 chr5 4484063 4484444 -198601088 + L1ME4a LINE L1 5209 5607 -555 6951 67 26 1 chr5 4484561 4486226 -198599306 + L1PA7 LINE L1 4455 6154 0 2025 127 0 7 chr5 4486399 4486691 -198598841 + AluSx SINE Alu 1 290 -22 996 121 0 73 chr5 4488915 4489080 -198596452 + Charlie3 DNA MER1_type 2550 2702 -8 302 279 16 16 chr5 4489107 4489229 -198596303 + L1ME4a LINE L1 5762 5883 -238 441 309 90 18 chr5 4490641 4490864 -198594668 - MLT1J2 LTR MaLR -158 292 54 250 235 74 25 chr5 4491105 4491186 -198594346 - Charlie7 DNA MER1_type -1 2611 2527 1335 224 86 45 chr5 4491382 4491542 -198593990 + L1MC1 LINE L1 4341 4493 -1653 2045 93 0 0 chr5 4491542 4491830 -198593702 + AluSq SINE Alu 35 322 0 1335 224 86 45 chr5 4491830 4492133 -198593399 + L1MC1 LINE L1 4493 4824 -1322 5061 150 32 8 chr5 4492161 4493029 -198592503 + L1MC1 LINE L1 5356 6244 -89 419 132 0 85 chr5 4493142 4493248 -198592284 + L1MA7 LINE L1 6194 6290 -1 896 140 11 11 chr5 4493536 4493715 -198591817 + GA-rich Low_complexity Low_complexity 2 180 0 749 165 24 10 chr5 4493743 4494011 -198591521 + GA-rich Low_complexity Low_complexity 1 271 0 255 195 0 0 chr5 4494011 4494052 -198591480 + polypurine Low_complexity Low_complexity 1 41 0 681 171 28 6 chr5 4494052 4494228 -198591304 + GA-rich Low_complexity Low_complexity 1 180 0 203 146 24 0 chr5 4494256 4494297 -198591235 + GA-rich Low_complexity Low_complexity 1 42 0 2319 225 49 24 chr5 4494338 4494952 -198590580 - L1MB3 LINE L1 -16 6167 5539 2292 128 0 0 chr5 4497710 4498022 -198587510 - AluSx SINE Alu 0 312 1 337 318 40 10 chr5 4498158 4498359 -198587173 + LTR16A LTR ERVL 203 409 -41 2366 60 0 3 chr5 4498458 4498779 -198586753 - AluY SINE Alu 0 320 1 346 240 40 40 chr5 4498970 4499120 -198586412 - L1MCc LINE L1 -6250 173 24 235 171 24 0 chr5 4500390 4500431 -198585101 + L1ME LINE L1 5560 5601 -561 1270 132 0 0 chr5 4500539 4500724 -198584808 + AluSg/x SINE Alu 131 312 0 21 0 0 0 chr5 4501236 4501257 -198584275 + AT_rich Low_complexity Low_complexity 1 21 0 818 211 17 29 chr5 4501489 4501682 -198583850 + MLT1A2 LTR MaLR 1 174 -200 208 220 0 0 chr5 4501682 4501732 -198583800 + CT-rich Low_complexity Low_complexity 1 50 0 2021 234 42 22 chr5 4501858 4502310 -198583222 + MLT1A2-int LTR MaLR 1271 1731 -4 1297 243 38 30 chr5 4502314 4502685 -198582847 + MLT1A2 LTR MaLR 1 374 0 273 264 28 47 chr5 4504331 4504437 -198581095 - MIR SINE MIR -1 261 158 365 179 64 0 chr5 4504782 4504860 -198580672 - L1MC1 LINE L1 -8 6325 6243 1504 115 42 0 chr5 4504862 4505079 -198580453 + THE1B LTR MaLR 1 226 -138 24491 128 16 77 chr5 4506041 4509085 -198576447 + L1P LINE L1 12 2676 -3470 2276 113 0 0 chr5 4509085 4509386 -198576146 + AluY SINE Alu 1 301 -10 24491 128 16 77 chr5 4509386 4511007 -198574525 + L1P LINE L1 2676 4394 -1752 206 45 15 159 chr5 4511176 4511377 -198574155 + (CACAT)n Simple_repeat Simple_repeat 5 176 0 270 29 0 162 chr5 4511395 4511599 -198573933 + (CACAT)n Simple_repeat Simple_repeat 1 171 0 * 376 364 0 0 chr5 4511465 4511763 -198573769 + C-rich Low_complexity Low_complexity 1 298 0 3708 47 0 4 chr5 4513625 4514075 -198571457 - LTR7 LTR ERV1 -2 448 1 1634 171 25 0 chr5 4514404 4514685 -198570847 + AluJb SINE Alu 1 288 -24 269 176 29 0 chr5 4514685 4514753 -198570779 + (TA)n Simple_repeat Simple_repeat 1 70 0 430 92 72 20 chr5 4514755 4514907 -198570625 + (TTATA)n Simple_repeat Simple_repeat 1 160 0 323 162 27 0 chr5 4514910 4514984 -198570548 + (TA)n Simple_repeat Simple_repeat 2 77 0 557 268 60 0 chr5 4517016 4517199 -198568333 + MIR SINE MIR 61 254 -8 1581 82 5 0 chr5 4517780 4517986 -198567546 - AluY SINE Alu -94 217 11 22 56 0 0 chr5 4518120 4518156 -198567376 + AT_rich Low_complexity Low_complexity 1 36 0 2322 89 3 0 chr5 4518622 4518913 -198566619 + AluSp SINE Alu 1 292 -21 23 0 0 0 chr5 4518929 4518952 -198566580 + AT_rich Low_complexity Low_complexity 1 23 0 200 368 46 0 chr5 4519358 4519513 -198566019 + MIR SINE MIR 18 183 -58 28 0 0 0 chr5 4521032 4521060 -198564472 + AT_rich Low_complexity Low_complexity 1 28 0 225 304 35 3 chr5 4521803 4521905 -198563627 + MIR SINE MIR 31 134 -74 2117 120 6 28 chr5 4522178 4522495 -198563037 + AluSx SINE Alu 1 310 -2 199 276 138 43 chr5 4527368 4527484 -198558048 + L2 LINE L2 3010 3136 -177 2393 118 28 3 chr5 4527524 4527879 -198557653 - THE1B LTR MaLR 0 364 1 354 234 0 0 chr5 4528194 4528301 -198557231 + (TGGG)n Simple_repeat Simple_repeat 3 109 0 601 203 9 6 chr5 4529926 4530273 -198555259 + (TGGA)n Simple_repeat Simple_repeat 1 347 0 222 205 0 0 chr5 4530406 4530445 -198555087 + T-rich Low_complexity Low_complexity 5 43 0 379 281 158 32 chr5 4531701 4532107 -198553425 - L1ME4a LINE L1 -239 5882 5426 314 280 15 63 chr5 4533211 4533265 -198552267 + L1MDb LINE L1 1147 1202 -5207 1355 218 92 12 chr5 4533265 4533600 -198551932 - MLT1A1 LTR MaLR 0 365 4 314 280 15 63 chr5 4533600 4533813 -198551719 + L1MDb LINE L1 1202 1401 -5008 514 339 47 4 chr5 4533861 4534097 -198551435 + L1M4 LINE L1 4628 4873 -1273 234 91 0 0 chr5 4534238 4534271 -198551261 + (TTTTC)n Simple_repeat Simple_repeat 2 34 0 245 182 121 30 chr5 4535110 4535176 -198550356 + MLT1K LTR MaLR 192 263 -325 236 305 53 11 chr5 4535134 4535229 -198550303 + LTR67 LTR ERVL 146 244 -313 * 2018 136 0 0 chr5 4535340 4535613 -198549919 - AluSg SINE Alu -37 273 1 21 57 0 0 chr5 4537347 4537382 -198548150 + AT_rich Low_complexity Low_complexity 1 35 0 2250 66 0 0 chr5 4537504 4537776 -198547756 + AluY SINE Alu 34 305 -6 2199 108 0 10 chr5 4538890 4539186 -198546346 + AluSc SINE Alu 1 293 -16 3730 233 19 42 chr5 4539736 4541264 -198544268 - L1P3 LINE L1 -4735 1140 4 1690 188 14 0 chr5 4541309 4541597 -198543935 - AluSx SINE Alu -17 295 4 192 77 0 0 chr5 4543608 4543634 -198541898 + (CA)n Simple_repeat Simple_repeat 2 27 0 516 221 0 0 chr5 4543645 4543994 -198541538 + (CA)n Simple_repeat Simple_repeat 1 349 0 462 243 0 0 chr5 4544005 4544182 -198541350 + (CA)n Simple_repeat Simple_repeat 1 177 0 393 247 0 0 chr5 4544207 4544373 -198541159 + (CA)n Simple_repeat Simple_repeat 2 167 0 195 42 0 0 chr5 4545002 4545026 -198540506 + (CAAAG)n Simple_repeat Simple_repeat 1 24 0 31 0 0 0 chr5 4546937 4546968 -198538564 + AT_rich Low_complexity Low_complexity 1 31 0 196 339 46 15 chr5 4547735 4547865 -198537667 - L2 LINE L2 -15 3298 3165 553 233 72 22 chr5 4548029 4548209 -198537323 - L1MC4 LINE L1 -1053 6989 6801 2683 17 3 0 chr5 4549020 4549314 -198536218 + AluY SINE Alu 1 295 -16 236 337 0 33 chr5 4550702 4550794 -198534738 - L3 LINE CR1 -161 1416 1328 230 318 16 0 chr5 4550921 4550984 -198534548 + MIR SINE MIR 85 148 -114 195 171 0 43 chr5 4551621 4551691 -198533841 + (CATATA)n Simple_repeat Simple_repeat 6 72 0 306 156 78 0 chr5 4551699 4551763 -198533769 - L1MCa LINE L1 -4362 2064 1996 1349 172 19 130 chr5 4551763 4552124 -198533408 - MER7A DNA MER2_type -16 330 12 1833 108 8 8 chr5 4552232 4552492 -198533040 + AluSg SINE Alu 32 291 -19 524 236 6 0 chr5 4554164 4554342 -198531190 + (CA)n Simple_repeat Simple_repeat 1 179 0 477 244 134 0 chr5 4554373 4554545 -198530987 - MLT2F LTR ERVL -8 655 461 451 272 111 14 chr5 4558089 4558306 -198527226 - L1ME4a LINE L1 -248 5873 5636 24 0 0 0 chr5 4558311 4558335 -198527197 + AT_rich Low_complexity Low_complexity 1 24 0 27 29 0 0 chr5 4558400 4558434 -198527098 + AT_rich Low_complexity Low_complexity 1 34 0 227 262 0 0 chr5 4558438 4558499 -198527033 + LTR66 LTR ERVL 398 458 -152 368 339 23 0 chr5 4558783 4558913 -198526619 + L1MEd LINE L1 511 643 -5562 1677 266 26 6 chr5 4558924 4559390 -198526142 + L1MD3 LINE L1 7511 7985 -10 232 328 26 70 chr5 4559403 4559674 -198525858 + L1MEd LINE L1 646 904 -5301 440 287 52 55 chr5 4559775 4560137 -198525395 + L1MEd LINE L1 981 1341 -4864 297 274 57 56 chr5 4560212 4560621 -198524911 + L1MEd LINE L1 1501 1760 -920 522 287 94 40 chr5 4560924 4561460 -198524072 + L1MEd LINE L1 2153 2665 -3550 1086 159 0 37 chr5 4561795 4561984 -198523548 + L1PA16 LINE L1 5976 6157 -9 23 0 0 0 chr5 4561984 4562007 -198523525 + AT_rich Low_complexity Low_complexity 1 23 0 826 200 0 50 chr5 4562111 4562291 -198523241 + AluJb SINE Alu 136 306 -6 754 212 232 10 chr5 4562293 4562595 -198522937 - L1ME3 LINE L1 -14 6148 5780 920 194 53 119 chr5 4562611 4562931 -198522601 + MLT1A2 LTR MaLR 26 324 -50 523 342 126 23 chr5 4563242 4563284 -198522248 + L1ME3A LINE L1 5294 5330 -840 2688 96 36 14 chr5 4563284 4563640 -198521892 + THE1B LTR MaLR 1 364 0 523 342 126 23 chr5 4563640 4564083 -198521449 + L1ME3A LINE L1 5330 5829 -341 1739 152 28 14 chr5 4564104 4564387 -198521145 + AluJb SINE Alu 1 287 -25 312 91 0 0 chr5 4566628 4566672 -198518860 + (GA)n Simple_repeat Simple_repeat 1 44 0 327 338 46 27 chr5 4566716 4566935 -198518597 - MIR SINE MIR -11 251 29 252 306 28 0 chr5 4566964 4567036 -198518496 - MER2 DNA MER2_type 0 345 272 2062 87 4 0 chr5 4567041 4567306 -198518226 + L1PB1 LINE L1 5886 6151 0 1335 177 83 0 chr5 4567347 4567612 -198517920 - MER2 DNA MER2_type -58 287 1 374 282 63 14 chr5 4568508 4568650 -198516882 - MIR SINE MIR -21 241 93 2139 116 14 0 chr5 4569287 4569579 -198515953 - AluSx SINE Alu -16 296 1 258 32 0 0 chr5 4569984 4570015 -198515517 + (ATTG)n Simple_repeat Simple_repeat 2 32 0 506 257 32 30 chr5 4570021 4570177 -198515355 + L1MA7 LINE L1 5972 6122 -169 2344 85 7 0 chr5 4570177 4570470 -198515062 + AluY SINE Alu 1 295 -16 506 257 32 30 chr5 4570470 4570483 -198515049 + L1MA7 LINE L1 6122 6133 -158 505 198 27 0 chr5 4570584 4570695 -198514837 + L1MA7 LINE L1 6176 6289 -2 183 184 0 0 chr5 4570743 4570781 -198514751 + GA-rich Low_complexity Low_complexity 1 38 0 225 143 0 0 chr5 4572563 4572598 -198512934 + MER63 DNA MER1_type 695 729 -107 270 324 46 46 chr5 4574001 4574174 -198511358 + MIR SINE MIR 48 220 -42 444 316 57 19 chr5 4574281 4574493 -198511039 + MIR SINE MIR 40 259 -3 396 263 153 58 chr5 4575689 4575836 -198509696 - L2 LINE L2 -50 3263 3131 374 68 0 17 chr5 4575836 4575895 -198509637 + (TA)n Simple_repeat Simple_repeat 2 59 0 396 263 153 58 chr5 4575895 4576158 -198509374 - L2 LINE L2 -182 3131 2814 1971 119 80 44 chr5 4576850 4577212 -198508320 - THE1C LTR MaLR 0 375 1 293 254 127 0 chr5 4578188 4578330 -198507202 + MLT1K LTR MaLR 363 522 -66 1217 273 52 11 chr5 4578774 4579236 -198506296 - L1M4 LINE L1 -1160 4986 4506 485 303 50 54 chr5 4579562 4579859 -198505673 - HAL1 LINE L1 -842 1665 1370 564 309 12 0 chr5 4580174 4580339 -198505193 + MIR SINE MIR 32 198 -64 237 118 0 0 chr5 4580848 4580882 -198504650 + (TC)n Simple_repeat Simple_repeat 1 34 0 342 242 13 19 chr5 4580883 4581040 -198504492 + CT-rich Low_complexity Low_complexity 4 159 0 2043 129 3 0 chr5 4582332 4582627 -198502905 + AluSx SINE Alu 1 296 -16 319 132 55 0 chr5 4582653 4582744 -198502788 + (TA)n Simple_repeat Simple_repeat 1 96 0 21 0 0 0 chr5 4582940 4582961 -198502571 + AT_rich Low_complexity Low_complexity 1 21 0 479 268 157 25 chr5 4585179 4585377 -198500155 + MIR SINE MIR 10 233 -29 1628 213 7 34 chr5 4585561 4586002 -198499530 + MLT2B3 LTR ERVL 5 481 -34 700 152 30 0 chr5 4586023 4586188 -198499344 + (TCTA)n Simple_repeat Simple_repeat 4 173 0 681 184 11 17 chr5 4586211 4586390 -198499142 + (TCTA)n Simple_repeat Simple_repeat 3 180 0 197 65 32 0 chr5 4586413 4586444 -198499088 + (TTTC)n Simple_repeat Simple_repeat 1 32 0 583 196 13 0 chr5 4586463 4586616 -198498916 + (TCTA)n Simple_repeat Simple_repeat 3 157 0 325 117 17 33 chr5 4586617 4586677 -198498855 + MLT2B3 LTR ERVL 462 554 0 207 69 0 0 chr5 4587197 4587226 -198498306 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 22 0 0 0 chr5 4587795 4587817 -198497715 + AT_rich Low_complexity Low_complexity 1 22 0 884 241 50 70 chr5 4588056 4588561 -198496971 + MER34 LTR ERV1 6 585 0 379 236 36 9 chr5 4589378 4589488 -198496044 + MARNA DNA Mariner 266 378 -208 2271 100 0 13 chr5 4590258 4590567 -198494965 - AluSx SINE Alu -7 305 1 622 197 61 14 chr5 4591735 4591882 -198493650 + MLT1B LTR MaLR 8 161 -229 2743 89 22 32 chr5 4591889 4592294 -198493238 - L1PA13 LINE L1 0 6163 5763 1137 194 0 0 chr5 4592294 4592516 -198493016 + L1P LINE L1 5174 5395 -751 895 204 33 50 chr5 4592516 4592756 -198492776 + MLT1B LTR MaLR 143 378 -12 9391 164 21 5 chr5 4592953 4592973 -198492559 - L1P LINE L1 -2743 3403 3385 7353 131 10 51 chr5 4592973 4593671 -198491861 - L1PA10 LINE L1 0 6168 5443 613 100 0 0 chr5 4593671 4593751 -198491781 - MADE1 DNA Mariner 0 80 1 7353 131 10 51 chr5 4593751 4595124 -198490408 - L1PA10 LINE L1 -725 5443 4154 9391 164 21 5 chr5 4595124 4596834 -198488698 - L1P LINE L1 -2761 3385 1645 2131 149 6 6 chr5 4596841 4597170 -198488362 - THE1B LTR MaLR 0 364 36 542 15 15 0 chr5 4599481 4599548 -198485984 + (TTTTC)n Simple_repeat Simple_repeat 3 70 0 852 153 0 22 chr5 4599549 4599732 -198485800 + CT-rich Low_complexity Low_complexity 1 179 0 2245 147 3 5 chr5 4605895 4606262 -198479270 - L1PB1 LINE L1 -3 6148 5783 378 231 0 0 chr5 4606262 4606353 -198479179 + (TG)n Simple_repeat Simple_repeat 1 91 0 1360 116 1 20 chr5 4606353 4606590 -198478942 - L1PB1 LINE L1 -359 5792 5569 613 265 0 0 chr5 4607084 4607235 -198478297 - L1MB7 LINE L1 -16 6168 6018 1657 185 0 3 chr5 4609725 4610023 -198475509 - AluJo SINE Alu -1 311 15 1848 138 10 3 chr5 4611136 4611440 -198474092 + AluSx SINE Alu 1 306 -6 268 306 70 70 chr5 4612412 4612611 -198472921 + MIR SINE MIR 13 211 -51 358 303 6 43 chr5 4613081 4613243 -198472289 + L1PA10 LINE L1 5858 6013 -155 * 1668 191 57 37 chr5 4613115 4613517 -198472015 + L1MA4A LINE L1 5888 6297 -6 297 312 6 6 chr5 4614126 4614296 -198471236 + (TA)n Simple_repeat Simple_repeat 2 171 0 267 341 16 0 chr5 4614422 4614548 -198470984 + C-rich Low_complexity Low_complexity 6 133 0 233 245 0 7 chr5 4614551 4614702 -198470830 + (CA)n Simple_repeat Simple_repeat 1 150 0 216 111 0 0 chr5 4614802 4614838 -198470694 + (CA)n Simple_repeat Simple_repeat 1 36 0 2135 118 0 0 chr5 4617507 4617813 -198467719 + AluSq SINE Alu 2 307 -6 1918 228 150 110 chr5 4620598 4621154 -198464378 - L1MC3 LINE L1 -9 7776 7244 265 245 39 59 chr5 4621154 4621256 -198464276 - MLT1F1 LTR MaLR -434 133 34 1918 228 150 110 chr5 4621256 4621650 -198463882 - L1MC3 LINE L1 -541 7244 6683 204 118 29 0 chr5 4622377 4622411 -198463121 + GA-rich Low_complexity Low_complexity 2 36 0 544 249 169 80 chr5 4622501 4622780 -198462752 + MLT1H1 LTR MaLR 14 267 -288 580 288 25 0 chr5 4622780 4622978 -198462554 + MER105 DNA DNA 2 204 0 544 249 169 80 chr5 4622978 4623184 -198462348 + MLT1H1 LTR MaLR 267 542 -13 322 265 41 0 chr5 4624297 4624395 -198461137 + MIR SINE MIR 151 252 -10 1715 173 52 30 chr5 4625186 4625551 -198459981 + THE1C LTR MaLR 1 373 -2 9491 141 16 35 chr5 4625555 4627164 -198458368 + THE1C-int LTR MaLR 3 1580 0 1492 170 38 98 chr5 4627164 4627563 -198457969 + THE1C LTR MaLR 1 375 0 493 255 59 20 chr5 4629397 4629550 -198455982 + MER70B LTR ERVL 1 159 -419 * 2116 245 21 4 chr5 4629549 4630019 -198455513 + MER70B LTR ERVL 90 567 -11 331 212 29 7 chr5 4630302 4630439 -198455093 + GA-rich Low_complexity Low_complexity 2 141 0 468 175 0 0 chr5 4630540 4630637 -198454895 + GA-rich Low_complexity Low_complexity 2 98 0 267 299 11 0 chr5 4631215 4631302 -198454230 + (CA)n Simple_repeat Simple_repeat 1 88 0 2468 36 7 10 chr5 4633913 4634215 -198451317 - AluY SINE Alu -10 301 1 1367 203 6 37 chr5 4634270 4634591 -198450941 - AluJb SINE Alu -1 311 1 2045 101 0 4 chr5 4634781 4635058 -198450474 - AluSq SINE Alu -27 286 11 1866 120 0 33 chr5 4635205 4635504 -198450028 - AluSx SINE Alu -23 289 1 26 0 0 0 chr5 4635768 4635794 -198449738 + AT_rich Low_complexity Low_complexity 1 26 0 1702 173 0 13 chr5 4636279 4636585 -198448947 + AluSx SINE Alu 1 302 -10 1643 110 0 62 chr5 4636894 4637167 -198448365 + AluSg SINE Alu 49 304 -6 345 310 192 15 chr5 4637374 4637645 -198447887 + L1M4 LINE L1 5074 5392 -754 1429 219 135 12 chr5 4688003 4688419 -198397113 - MLT1C LTR MaLR 0 467 1 345 300 95 21 chr5 4688528 4688718 -198396814 - MIR SINE MIR -36 226 23 1306 210 63 30 chr5 4689512 4689874 -198395658 - MLT1A2 LTR MaLR 0 374 1 258 294 88 0 chr5 4691627 4691729 -198393803 - MIR SINE MIR -62 146 36 226 143 0 0 chr5 4692124 4692166 -198393366 - L2 LINE L2 -1 3312 3271 343 202 0 0 chr5 4692434 4692505 -198393027 - MLT1D LTR MaLR -2 593 477 292 247 112 8 chr5 4692657 4692779 -198392753 - MLT1H LTR MaLR -376 173 82 255 326 54 0 chr5 4692839 4692931 -198392601 + L2 LINE L2 3214 3310 -3 25 51 0 0 chr5 4693769 4693808 -198391724 + AT_rich Low_complexity Low_complexity 1 39 0 1499 165 32 21 chr5 4693810 4694089 -198391443 - AluJb SINE Alu -30 282 1 2179 131 0 0 chr5 4694110 4694415 -198391117 - AluSx SINE Alu -7 305 1 1242 271 32 42 chr5 4694416 4694914 -198390618 - MLT1D LTR MaLR -12 493 1 680 226 43 43 chr5 4694968 4695176 -198390356 - MER3 DNA MER1_type -1 208 1 4169 164 18 78 chr5 4697101 4698060 -198387472 + L1MB3 LINE L1 5280 6180 -3 910 253 77 33 chr5 4699342 4699678 -198385854 - MER39 LTR ERV1 0 707 357 246 242 62 62 chr5 4699699 4699827 -198385705 - MER39 LTR ERV1 -574 133 6 4549 161 46 23 chr5 4701168 4702009 -198383523 + L1MC1 LINE L1 5450 6310 -23 2743 250 40 22 chr5 4702020 4702841 -198382691 + L1ME1 LINE L1 5325 6160 -6 728 197 8 0 chr5 4703143 4703275 -198382257 + FLAM_C SINE Alu 1 133 0 373 254 18 26 chr5 4705097 4705211 -198380321 - Charlie1b DNA MER1_type -323 200 88 1154 262 29 29 chr5 4706449 4706789 -198378743 - MLT1A1 LTR MaLR 0 365 26 1525 206 41 32 chr5 4707010 4707452 -198378080 + Charlie1b DNA MER1_type 74 519 -4 213 39 0 0 chr5 4707540 4707566 -198377966 + (TTA)n Simple_repeat Simple_repeat 2 27 0 1335 173 82 12 chr5 4707575 4707830 -198377702 - AluJo SINE Alu -24 288 16 211 257 40 0 chr5 4707872 4707946 -198377586 + CT-rich Low_complexity Low_complexity 5 81 0 306 257 49 28 chr5 4708623 4708767 -198376765 + CT-rich Low_complexity Low_complexity 2 148 0 264 184 0 0 chr5 4708842 4708891 -198376641 - Charlie1 DNA MER1_type 0 2761 2713 2474 94 46 6 chr5 4710235 4710585 -198374947 + THE1B LTR MaLR 1 364 0 189 303 0 0 chr5 4711433 4711578 -198373954 + (TG)n Simple_repeat Simple_repeat 1 145 0 1972 189 21 0 chr5 4712813 4713195 -198372337 - MLT1B LTR MaLR 0 390 1 22 56 0 0 chr5 4715628 4715664 -198369868 + AT_rich Low_complexity Low_complexity 1 36 0 2422 53 0 3 chr5 4715711 4716061 -198369471 - AluY SINE Alu 0 349 1 1387 224 48 3 chr5 4718252 4718587 -198366945 + MER89 LTR ERV1 188 537 -22 182 380 43 0 chr5 4719230 4719322 -198366210 - L3 LINE CR1 -588 989 894 1505 232 30 14 chr5 4719900 4720267 -198365265 - MLT1A2 LTR MaLR 0 374 2 1792 35 4 18 chr5 4720471 4720698 -198364834 + L1PA4 LINE L1 5932 6155 0 1908 161 146 3 chr5 4721199 4721577 -198363955 + MSTB1 LTR MaLR 1 432 0 262 336 30 8 chr5 4722250 4722384 -198363148 + MIR SINE MIR 40 176 -86 1627 65 0 0 chr5 4723187 4723387 -198362145 - L1PA8 LINE L1 -6 6166 5967 423 243 0 10 chr5 4723980 4724083 -198361449 - FLAM_A SINE Alu -9 133 32 318 275 43 72 chr5 4724298 4724436 -198361096 - MLT1H LTR MaLR -207 342 209 22 35 0 0 chr5 4724787 4724816 -198360716 + AT_rich Low_complexity Low_complexity 1 29 0 2315 247 51 33 chr5 4724951 4725644 -198359888 + L1MCa LINE L1 37 716 -5848 342 0 0 0 chr5 4725644 4725682 -198359850 + (CA)n Simple_repeat Simple_repeat 2 39 0 2315 247 51 33 chr5 4725682 4726208 -198359324 + L1MCa LINE L1 716 1991 -4573 2220 200 22 16 chr5 4726231 4726720 -198358812 + L1MC3 LINE L1 7293 7784 -1 12879 28 1 0 chr5 4727825 4729342 -198356190 - L1P LINE L1 -1702 4444 2926 1323 0 0 0 chr5 4729343 4729487 -198356045 + L1PA2 LINE L1 6009 6152 -3 922 202 33 29 chr5 4730352 4730668 -198354864 - MSTD LTR MaLR 0 396 4 745 281 86 69 chr5 4731713 4732571 -198352961 - L1MEd LINE L1 -4871 1248 427 372 291 50 50 chr5 4735900 4736120 -198349412 - MIR SINE MIR -30 232 13 1204 179 25 122 chr5 4738262 4738615 -198346917 - MLT1A1 LTR MaLR -46 319 1 2494 31 7 0 chr5 4738872 4739166 -198346366 + L1PA4 LINE L1 5860 6155 0 1375 236 120 23 chr5 4739557 4739956 -198345576 + MER31B LTR ERV1 1 438 -28 306 115 0 0 chr5 4740515 4740567 -198344965 + (CA)n Simple_repeat Simple_repeat 1 52 0 462 110 82 0 chr5 4741061 4741134 -198344398 - MADE1 DNA Mariner -1 79 1 302 306 20 0 chr5 4741510 4741608 -198343924 - MER5A DNA MER1_type -80 109 10 972 217 53 35 chr5 4741625 4741943 -198343589 - MER33 DNA MER1_type 0 324 1 325 378 67 11 chr5 4741945 4742212 -198343320 - L3 LINE CR1 -46 1531 1250 305 342 69 32 chr5 4742506 4742902 -198342630 - L3 LINE CR1 -745 832 363 406 260 16 16 chr5 4743433 4743556 -198341976 - L2 LINE L2 -4 3309 3187 22 0 0 0 chr5 4744507 4744529 -198341003 + AT_rich Low_complexity Low_complexity 1 22 0 318 106 0 0 chr5 4745062 4745109 -198340423 + (TG)n Simple_repeat Simple_repeat 1 47 0 225 211 0 0 chr5 4745121 4745173 -198340359 + (CATATA)n Simple_repeat Simple_repeat 2 53 0 237 167 0 0 chr5 4745416 4745470 -198340062 + GA-rich Low_complexity Low_complexity 2 55 0 180 0 0 0 chr5 4747025 4747045 -198338487 + (A)n Simple_repeat Simple_repeat 1 20 0 7201 161 74 5 chr5 4747445 4749913 -198335619 + L1MA3 LINE L1 3657 6305 0 863 203 7 7 chr5 4753675 4753828 -198331704 - AluJb SINE Alu -23 289 137 1789 182 116 6 chr5 4754814 4755177 -198330355 + MER57A LTR ERV1 1 403 0 6029 111 44 0 chr5 4756201 4757189 -198328343 - L1PA13 LINE L1 -2 6161 5168 8252 214 67 29 chr5 4762701 4763675 -198321857 - L1MC1 LINE L1 -6 6607 5671 1494 116 5 14 chr5 4763675 4763891 -198321641 - AluSq SINE Alu -6 307 94 8252 214 67 29 chr5 4763891 4769228 -198316304 - L1MC1 LINE L1 -942 5671 23 2220 113 0 7 chr5 4769243 4769543 -198315989 - AluSx SINE Alu -14 298 1 24 0 0 0 chr5 4769553 4769577 -198315955 + AT_rich Low_complexity Low_complexity 1 24 0 298 196 22 0 chr5 4769624 4769716 -198315816 + (TA)n Simple_repeat Simple_repeat 2 95 0 186 143 0 0 chr5 4769870 4769905 -198315627 + (TC)n Simple_repeat Simple_repeat 1 35 0 459 0 0 0 chr5 4769905 4769956 -198315576 + (TG)n Simple_repeat Simple_repeat 2 52 0 1681 189 85 33 chr5 4769956 4770480 -198315052 - MLT2A2 LTR ERVL -5 549 2 339 25 0 0 chr5 4770481 4770521 -198315011 + (TG)n Simple_repeat Simple_repeat 2 41 0 191 408 14 7 chr5 4770640 4770787 -198314745 + MIR3 SINE MIR 20 167 -41 2248 110 0 10 chr5 4771177 4771486 -198314046 + AluSx SINE Alu 1 306 -6 22 0 0 0 chr5 4771607 4771629 -198313903 + AT_rich Low_complexity Low_complexity 1 22 0 534 296 87 27 chr5 4771812 4772146 -198313386 - MLT1H LTR MaLR -195 354 1 189 0 0 0 chr5 4772448 4772469 -198313063 + (A)n Simple_repeat Simple_repeat 1 21 0 1897 135 7 0 chr5 4772520 4772801 -198312731 - AluSx SINE Alu -7 305 23 2335 97 0 0 chr5 4773304 4773602 -198311930 + AluSp SINE Alu 4 301 -12 360 0 0 0 chr5 4773602 4773642 -198311890 + (TG)n Simple_repeat Simple_repeat 2 41 0 318 190 20 30 chr5 4774585 4774685 -198310847 + A-rich Low_complexity Low_complexity 6 104 0 269 82 20 0 chr5 4775645 4775694 -198309838 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 3211 100 20 11 chr5 4775736 4776176 -198309356 - MLT2A1 LTR ERVL 0 444 1 43342 84 7 9 chr5 4776176 4781843 -198303689 - HERVL-A1 LTR ERVL 0 5654 1 3078 118 18 11 chr5 4781843 4782284 -198303248 - MLT2A1 LTR ERVL 0 444 1 1803 196 17 6 chr5 4782744 4783097 -198302435 + MLT1A1 LTR MaLR 1 357 -8 201 298 21 32 chr5 4783372 4783466 -198302066 + MIR SINE MIR 71 163 -99 650 90 0 0 chr5 4783533 4783622 -198301910 + L1PA8 LINE L1 6084 6172 0 1607 164 7 31 chr5 4783998 4784314 -198301218 + AluJo SINE Alu 4 312 0 497 128 26 0 chr5 4784396 4784474 -198301058 - MER116 DNA Mariner 0 80 1 23 54 0 0 chr5 4784502 4784539 -198300993 + AT_rich Low_complexity Low_complexity 1 37 0 260 184 0 0 chr5 4785858 4785907 -198299625 - MER4-int LTR ERV1 -5436 1162 1114 597 249 0 0 chr5 4785932 4786109 -198299423 + (CA)n Simple_repeat Simple_repeat 2 178 0 251 267 124 0 chr5 4786764 4786869 -198298663 - MER45A DNA AcHobo 0 178 61 21 57 0 0 chr5 4786977 4787012 -198298520 + AT_rich Low_complexity Low_complexity 1 35 0 277 62 42 0 chr5 4789325 4789373 -198296159 + (GA)n Simple_repeat Simple_repeat 2 51 0 1343 215 0 19 chr5 4792588 4792853 -198292679 - AluJo SINE Alu -52 260 1 1604 114 76 76 chr5 4792901 4793190 -198292342 + AluSx SINE Alu 1 289 -23 627 218 156 0 chr5 4793229 4793408 -198292124 - MER20 DNA MER1_type -12 207 1 21 71 0 0 chr5 4794456 4794498 -198291034 + AT_rich Low_complexity Low_complexity 1 42 0 2609 222 88 5 chr5 4794973 4795634 -198289898 - L1MD1 LINE L1 -9 6233 5518 2417 146 5 16 chr5 4795727 4796104 -198289428 + THE1C LTR MaLR 1 373 -2 421 223 78 105 chr5 4796341 4796575 -198288957 + L1ME LINE L1 1339 1690 -5257 1886 147 29 0 chr5 4796575 4796854 -198288678 - AluSx SINE Alu -23 289 3 421 223 78 105 chr5 4796854 4796951 -198288581 + L1ME LINE L1 1690 1788 -5159 1755 276 67 88 chr5 4796966 4797927 -198287605 + L1ME LINE L1 396 1335 -5103 675 218 86 47 chr5 4797981 4798018 -198287514 + L1ME LINE L1 1899 1933 -5024 450 0 0 0 chr5 4798018 4798068 -198287464 + (CA)n Simple_repeat Simple_repeat 1 50 0 675 218 86 47 chr5 4798068 4798287 -198287245 + L1ME LINE L1 1933 2165 -4792 * 3241 225 38 25 chr5 4798280 4799226 -198286306 + L1MC3 LINE L1 5668 6625 -1160 268 83 0 62 chr5 4799248 4799296 -198286236 - MLT2A2 LTR ERVL -10 443 399 225 282 13 13 chr5 4800143 4800240 -198285292 + GA-rich Low_complexity Low_complexity 2 149 0 558 218 3 9 chr5 4801938 4802276 -198283256 + (TA)n Simple_repeat Simple_repeat 1 335 0 345 270 22 0 chr5 4802276 4802365 -198283167 - L1MC4 LINE L1 -1337 6705 6615 318 277 0 43 chr5 4802342 4802436 -198283096 + L1MC4 LINE L1 6614 6703 -1339 * 301 209 15 0 chr5 4802376 4802443 -198283089 - L1MCa LINE L1 -4363 2063 1996 * 1031 302 158 39 chr5 4802470 4803951 -198281581 - L2 LINE L2 -4 3309 1610 2436 201 43 23 chr5 4806107 4806713 -198278819 - L1MB8 LINE L1 -5 6173 5556 22 0 0 0 chr5 4807408 4807430 -198278102 + AT_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr5 4808638 4808661 -198276871 + AT_rich Low_complexity Low_complexity 1 23 0 205 128 43 0 chr5 4810184 4810231 -198275301 + GA-rich Low_complexity Low_complexity 2 50 0 27 0 0 0 chr5 4810336 4810363 -198275169 + AT_rich Low_complexity Low_complexity 1 27 0 5465 72 1 0 chr5 4810374 4811097 -198274435 - HERVL LTR ERVL -1637 4017 3294 256 368 43 29 chr5 4812459 4812739 -198272793 + LTR67 LTR ERVL 18 301 -256 237 346 15 31 chr5 4816798 4816928 -198268604 + L2 LINE L2 3181 3308 -5 1670 181 6 49 chr5 4817356 4817706 -198267826 - AluJb SINE Alu 0 312 1 887 230 165 42 chr5 4819653 4820091 -198265441 - MLT1D LTR MaLR -1 625 8 344 172 0 0 chr5 4822940 4823004 -198262528 + Tigger3(Golem) DNA MER2_type 42 105 -2924 * 947 152 12 0 chr5 4822995 4823160 -198262372 + Tigger3(Golem) DNA MER2_type 2802 2968 -61 1436 113 54 14 chr5 4823552 4823773 -198261759 + MER30 DNA MER1_type 1 230 0 318 345 92 6 chr5 4824392 4824566 -198260966 - MER5A DNA MER1_type 0 189 1 263 242 11 77 chr5 4824877 4824968 -198260564 + MIR SINE MIR 178 262 0 2199 115 142 0 chr5 4825022 4825395 -198260137 - MSTA LTR MaLR -2 426 1 418 171 0 27 chr5 4826186 4826297 -198259235 + (TAGA)n Simple_repeat Simple_repeat 2 109 0 2033 126 129 26 chr5 4826732 4827120 -198258412 - MSTA LTR MaLR 0 428 1 1670 159 24 24 chr5 4827397 4827716 -198257816 - AluJb SINE Alu 0 312 1 235 322 16 33 chr5 4827838 4827959 -198257573 - L1M4 LINE L1 -3584 2562 2444 21 36 0 0 chr5 4828248 4828276 -198257256 + AT_rich Low_complexity Low_complexity 1 28 0 308 250 80 8 chr5 4829563 4829703 -198255829 + MLT1H LTR MaLR 421 593 -2 30 59 0 0 chr5 4829858 4829909 -198255623 + AT_rich Low_complexity Low_complexity 1 51 0 313 173 0 29 chr5 4830699 4830772 -198254760 - L1MCa LINE L1 -1339 6983 2006 2546 111 0 3 chr5 4830779 4831150 -198254382 - MLT2A1 LTR ERVL -74 370 1 284 230 0 124 chr5 4831150 4831263 -198254269 + L1MC3 LINE L1 6627 6725 -1060 757 203 0 14 chr5 4831263 4831401 -198254131 - FLAM_C SINE Alu -5 138 3 3042 244 58 22 chr5 4831402 4832427 -198253105 + L1MC3 LINE L1 6715 7775 -10 1089 285 95 58 chr5 4832438 4835211 -198250321 + L1MEc LINE L1 1069 3919 -2296 1473 308 58 9 chr5 4835861 4836847 -198248685 + L1MEc LINE L1 3881 4914 -1301 4350 188 11 26 chr5 4837523 4838997 -198246535 - L1MA6 LINE L1 0 6300 4850 921 162 11 0 chr5 4838989 4839174 -198246358 + L1 LINE L1 3961 4147 -1999 * 180 97 0 0 chr5 4839803 4839834 -198245698 + (CAAAAA)n Simple_repeat Simple_repeat 1 31 0 23 33 0 0 chr5 4841933 4841963 -198243569 + AT_rich Low_complexity Low_complexity 1 30 0 2187 99 17 0 chr5 4842627 4842919 -198242613 - AluSc SINE Alu -12 297 1 336 24 0 0 chr5 4843671 4843712 -198241820 + (CA)n Simple_repeat Simple_repeat 2 42 0 248 197 45 45 chr5 4844433 4844499 -198241033 + MIR SINE MIR 87 152 -110 1483 237 2 14 chr5 4845150 4845588 -198239944 - L1 LINE L1 -1034 5112 4680 25 0 0 0 chr5 4845616 4845641 -198239891 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr5 4845662 4845685 -198239847 + AT_rich Low_complexity Low_complexity 1 23 0 2121 98 22 182 chr5 4845860 4846399 -198239133 + MLT2A2 LTR ERVL 1 453 0 2197 108 17 0 chr5 4848526 4848822 -198236710 - AluSq SINE Alu -12 301 1 2062 106 4 7 chr5 4848866 4849140 -198236392 - AluSg SINE Alu -18 292 20 1780 166 3 7 chr5 4851675 4851986 -198233546 - AluSx SINE Alu 0 310 1 23 0 0 0 chr5 4855192 4855215 -198230317 + AT_rich Low_complexity Low_complexity 1 23 0 2085 141 0 3 chr5 4858133 4858432 -198227100 + AluSx SINE Alu 1 298 -14 309 298 32 8 chr5 4861197 4861321 -198224211 - MIR SINE MIR -19 243 117 214 254 32 79 chr5 4862076 4862202 -198223330 - L2 LINE L2 -555 2759 2640 362 337 0 23 chr5 4862383 4862735 -198222797 + (CA)n Simple_repeat Simple_repeat 1 343 0 311 312 13 26 chr5 4862747 4862901 -198222631 + (CA)n Simple_repeat Simple_repeat 1 152 0 298 346 12 12 chr5 4862944 4863106 -198222426 + (CA)n Simple_repeat Simple_repeat 1 162 0 194 319 42 56 chr5 4865482 4865626 -198219906 + L2 LINE L2 3163 3304 -9 1571 215 24 6 chr5 4866410 4866749 -198218783 + MLT2C1 LTR ERVL 5 349 -48 245 178 0 22 chr5 4866800 4866862 -198218670 + MLT2C1 LTR ERVL 357 397 0 289 345 0 9 chr5 4867165 4867278 -198218254 + L2 LINE L2 3193 3304 -9 389 211 21 18 chr5 4868237 4868578 -198216954 + (TAGA)n Simple_repeat Simple_repeat 1 342 0 901 126 11 0 chr5 4868622 4868797 -198216735 + (TAGA)n Simple_repeat Simple_repeat 2 178 0 584 70 12 0 chr5 4868827 4868913 -198216619 + (TAGA)n Simple_repeat Simple_repeat 1 87 0 1911 122 3 59 chr5 4870090 4870394 -198215138 - AluSx SINE Alu -21 291 5 411 153 0 48 chr5 4874473 4874662 -198210870 + (TA)n Simple_repeat Simple_repeat 1 180 0 286 105 0 0 chr5 4874662 4874700 -198210832 + (CA)n Simple_repeat Simple_repeat 1 38 0 2063 128 28 0 chr5 4875676 4875966 -198209566 + AluSq SINE Alu 1 298 -15 2542 113 8 8 chr5 4876264 4876628 -198208904 + THE1B LTR MaLR 1 364 0 1647 207 114 34 chr5 4880407 4880847 -198204685 - L1MB2 LINE L1 -2 6169 5695 648 239 0 0 chr5 4880885 4881015 -198204517 + FLAM_A SINE Alu 1 130 -3 305 327 138 11 chr5 4881502 4881762 -198203770 - MLT1J1 LTR MaLR -1 445 153 3774 180 46 18 chr5 4885086 4885868 -198199664 - Tigger3(Golem) DNA MER2_type 0 3029 2226 328 235 25 12 chr5 4885866 4885947 -198199585 - Tigger3(Golem) DNA MER2_type -2947 82 1 * 22 35 0 0 chr5 4887231 4887260 -198198272 + AT_rich Low_complexity Low_complexity 1 29 0 1943 167 6 13 chr5 4889677 4890075 -198195457 + AluSx SINE Alu 1 396 0 795 273 28 0 chr5 4890206 4890422 -198195110 - MER58A DNA MER1_type 0 224 3 194 327 0 0 chr5 4891930 4891982 -198193550 + L2 LINE L2 3195 3246 -67 23 0 0 0 chr5 4892123 4892146 -198193386 + AT_rich Low_complexity Low_complexity 1 23 0 21 57 0 0 chr5 4892224 4892259 -198193273 + AT_rich Low_complexity Low_complexity 1 35 0 5819 107 53 6 chr5 4892574 4893474 -198192058 - L1PA10 LINE L1 -7 6161 5226 824 139 21 3 chr5 4893474 4893625 -198191907 + L1P LINE L1 3602 3750 -2396 359 266 186 0 chr5 4893973 4894097 -198191435 - LTR16C LTR ERVL -248 243 97 1965 142 44 0 chr5 4894255 4894550 -198190982 - AluY SINE Alu -3 308 1 23 0 0 0 chr5 4894809 4894832 -198190700 + AT_rich Low_complexity Low_complexity 1 23 0 250 296 57 0 chr5 4894869 4895028 -198190504 + L1MCc LINE L1 1369 1536 -4887 188 301 0 0 chr5 4895093 4895166 -198190366 - L2 LINE L2 0 3272 3200 210 191 0 0 chr5 4899815 4899857 -198185675 + T-rich Low_complexity Low_complexity 1 42 0 235 231 19 0 chr5 4901071 4901123 -198184409 + GA-rich Low_complexity Low_complexity 4 56 0 2128 82 11 4 chr5 4901298 4901600 -198183932 + AluY SINE Alu 1 304 0 21398 163 21 18 chr5 4902889 4905579 -198179953 + L1M1 LINE L1 12 2693 -4872 2472 170 26 5 chr5 4905579 4905996 -198179536 + MSTA LTR MaLR 1 426 -2 21398 163 21 18 chr5 4905996 4907294 -198178238 + L1M1 LINE L1 2693 4018 -3547 1286 142 5 5 chr5 4907294 4907512 -198178020 + L1MA2 LINE L1 6087 6304 0 21398 163 21 18 chr5 4907512 4907529 -198178003 + L1M1 LINE L1 4018 4033 -3532 2500 181 49 19 chr5 4907551 4908038 -198177494 + LTR26B LTR ERV1 30 531 0 2244 135 0 0 chr5 4909702 4910014 -198175518 + AluSx SINE Alu 1 312 0 5504 144 19 32 chr5 4910591 4911526 -198174006 + MER49 LTR ERV1 1 923 0 255 224 15 15 chr5 4911839 4911906 -198173626 + GA-rich Low_complexity Low_complexity 2 68 0 5515 162 12 17 chr5 4912605 4912963 -198172569 - L1PB1 LINE L1 0 6151 5793 311 18 71 0 chr5 4912963 4913019 -198172513 + (TA)n Simple_repeat Simple_repeat 2 61 0 5515 162 12 17 chr5 4913019 4914397 -198171135 - L1PB1 LINE L1 -358 5793 4427 * 5761 217 13 4 chr5 4914396 4915683 -198169849 + L1PB1 LINE L1 4516 5814 -1751 820 153 0 16 chr5 4916566 4916690 -198168842 - FLAM_C SINE Alu -11 122 1 24 0 0 0 chr5 4917266 4917290 -198168242 + AT_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr5 4917711 4917742 -198167790 + AT_rich Low_complexity Low_complexity 1 31 0 191 250 0 16 chr5 4917757 4917821 -198167711 + CT-rich Low_complexity Low_complexity 3 65 0 297 0 0 0 chr5 4918710 4918743 -198166789 + (TG)n Simple_repeat Simple_repeat 1 33 0 244 190 17 0 chr5 4918922 4918980 -198166552 + MER113 DNA MER1_type? 159 217 -304 1304 201 41 106 chr5 4919557 4919974 -198165558 + MLT1B LTR MaLR 1 390 0 342 290 38 30 chr5 4920017 4920148 -198165384 + L2 LINE L2 3182 3313 0 2152 196 27 7 chr5 4920999 4921413 -198164119 + MSTB LTR MaLR 1 422 -4 184 315 0 19 chr5 4924769 4924823 -198160709 + L2 LINE L2 3210 3262 -10 863 213 80 36 chr5 4927769 4928146 -198157386 - MLT1E1 LTR MaLR -2 591 174 1216 241 40 54 chr5 4928146 4928516 -198157016 - MLT1A1 LTR MaLR 0 365 1 863 213 80 36 chr5 4928516 4928587 -198156945 - MLT1E1 LTR MaLR -419 174 108 345 271 37 28 chr5 4928556 4928663 -198156869 - MLT1E LTR MaLR -427 166 59 * 426 313 56 0 chr5 4928947 4929145 -198156387 + LTR16C LTR ERVL 283 491 0 1502 183 54 0 chr5 4929205 4929447 -198156085 - MLT1C LTR MaLR -12 455 195 192 40 0 0 chr5 4929447 4929472 -198156060 + (TG)n Simple_repeat Simple_repeat 2 26 0 1502 183 54 0 chr5 4929472 4929508 -198156024 - MLT1C LTR MaLR -272 195 162 1137 167 15 0 chr5 4929576 4929780 -198155752 + L1MA4 LINE L1 6060 6266 -34 7650 246 61 45 chr5 4929782 4930534 -198154998 - L1 LINE L1 -1849 4501 3763 2031 125 3 0 chr5 4930534 4930830 -198154702 - AluY SINE Alu -4 307 11 7650 246 61 45 chr5 4930830 4932495 -198153037 - L1 LINE L1 -2587 3763 2127 2027 121 24 3 chr5 4932495 4932784 -198152748 - AluSx SINE Alu -17 295 1 7650 246 61 45 chr5 4932784 4933994 -198151538 - L1 LINE L1 -4223 2127 1053 1480 168 44 0 chr5 4933994 4934244 -198151288 + AluJb SINE Alu 43 303 -9 7650 246 61 45 chr5 4934244 4935311 -198150221 - L1 LINE L1 -5297 1053 5 211 209 45 0 chr5 4935420 4935487 -198150045 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 272 298 24 0 chr5 4935489 4935573 -198149959 + L1MEc LINE L1 118 203 -6193 331 359 18 12 chr5 4935612 4935779 -198149753 + L1MEc LINE L1 261 428 -5968 1090 278 35 12 chr5 4935945 4936283 -198149249 - L1MC/D LINE L1 -2208 5600 5255 284 309 36 47 chr5 4936397 4936675 -198148857 - L1MC/D LINE L1 -1115 5031 4757 2105 188 9 0 chr5 4936690 4937035 -198148497 - MER7A DNA MER2_type 0 346 1 507 311 117 30 chr5 4937201 4937802 -198147730 + L2 LINE L2 2662 3312 -1 489 296 5 7 chr5 4938273 4938736 -198146796 + (CA)n Simple_repeat Simple_repeat 1 461 0 254 292 6 0 chr5 4938794 4938955 -198146577 + (CA)n Simple_repeat Simple_repeat 1 162 0 186 189 0 0 chr5 4939483 4939520 -198146012 + (CAATA)n Simple_repeat Simple_repeat 2 38 0 1840 121 10 34 chr5 4942203 4942501 -198143031 - AluSx SINE Alu -21 291 1 238 330 154 0 chr5 4943614 4943705 -198141827 - MIR SINE MIR -88 120 16 461 351 20 15 chr5 4944349 4944551 -198140981 + MIR SINE MIR 48 250 -12 747 188 0 0 chr5 4945161 4945337 -198140195 + (TG)n Simple_repeat Simple_repeat 2 177 0 290 340 10 0 chr5 4945999 4946102 -198139430 + MIR SINE MIR 146 249 -13 200 33 0 33 chr5 4947421 4947451 -198138081 + (TTTC)n Simple_repeat Simple_repeat 4 32 0 1473 181 63 20 chr5 4947456 4947484 -198138048 - AluJb SINE Alu 0 312 287 1068 44 22 39 chr5 4947484 4947666 -198137866 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 1473 181 63 20 chr5 4947666 4947936 -198137596 - AluJb SINE Alu -25 287 1 2659 52 9 0 chr5 4948494 4948824 -198136708 + L1PA7 LINE L1 5817 6149 -5 4492 104 14 1 chr5 4948866 4949522 -198136010 + L1PB2 LINE L1 5486 6149 -2 424 270 15 7 chr5 4950688 4950825 -198134707 + (CA)n Simple_repeat Simple_repeat 2 139 0 406 294 106 42 chr5 4951387 4951652 -198133880 + L3b LINE CR1 1184 1465 -118 391 227 23 0 chr5 4951825 4951913 -198133619 - L1ME1 LINE L1 -20 6146 6057 352 173 111 0 chr5 4953154 4953235 -198132297 - L1MC4 LINE L1 -1339 6703 6614 309 262 71 0 chr5 4953251 4953335 -198132197 - L1MC4 LINE L1 -1339 6703 6614 300 267 47 0 chr5 4953271 4953357 -198132175 + L1MC4 LINE L1 6614 6703 -1339 * 613 166 6 30 chr5 4953477 4953646 -198131886 + CT-rich Low_complexity Low_complexity 1 165 0 25 0 0 0 chr5 4954617 4954642 -198130890 + AT_rich Low_complexity Low_complexity 1 25 0 2124 110 4 0 chr5 4954906 4955230 -198130302 - AluSx SINE Alu 0 325 1 491 191 48 40 chr5 4956328 4956454 -198129078 + MER5A DNA MER1_type 3 129 -60 1699 194 39 31 chr5 4956517 4956904 -198128628 + MLT1B LTR MaLR 1 390 0 2304 106 6 3 chr5 4956991 4957302 -198128230 + AluSx SINE Alu 1 312 0 198 323 85 15 chr5 4957695 4957825 -198127707 - MIR SINE MIR -44 218 80 23 0 0 0 chr5 4958208 4958231 -198127301 + AT_rich Low_complexity Low_complexity 1 23 0 439 253 88 24 chr5 4959874 4960044 -198125488 - L3b LINE CR1 -123 1460 1280 530 100 17 133 chr5 4960067 4960187 -198125345 - AluSg/x SINE Alu -17 292 187 1820 103 0 9 chr5 4960187 4960420 -198125112 - AluSc SINE Alu -78 231 1 338 264 75 57 chr5 4962236 4962395 -198123137 - LTR16A1 LTR ERVL -30 427 266 991 224 69 114 chr5 4962751 4963219 -198122313 - MLT1D LTR MaLR -16 434 4 2104 120 0 3 chr5 4964438 4964772 -198120760 + AluSx SINE Alu 1 333 0 258 186 147 85 chr5 4965485 4965614 -198119918 - MLT1H LTR MaLR -28 521 385 896 219 47 9 chr5 4966250 4966483 -198119049 + MLT1C LTR MaLR 1 242 -225 217 286 37 62 chr5 4966687 4966775 -198118757 + MIR SINE MIR 70 154 -108 1584 229 87 18 chr5 4966775 4967212 -198118320 - MLT1C LTR MaLR 0 467 1 217 286 37 62 chr5 4967212 4967284 -198118248 + MIR SINE MIR 154 226 -36 1916 155 0 10 chr5 4969577 4969886 -198115646 - AluSx SINE Alu -4 308 3 798 187 48 17 chr5 4969944 4970214 -198115318 - MLT1B LTR MaLR 0 390 6 21 0 0 0 chr5 4970251 4970272 -198115260 + AT_rich Low_complexity Low_complexity 1 21 0 802 186 19 86 chr5 4970344 4970379 -198115153 + MER58A DNA MER1_type 29 65 -2355 2305 41 0 11 chr5 4970379 4970647 -198114885 - AluY SINE Alu -5 306 42 802 186 19 86 chr5 4970647 4970821 -198114711 + MER58A DNA MER1_type 65 224 0 896 196 121 46 chr5 4970826 4971107 -198114425 + MER33 DNA MER1_type 1 302 -22 1131 111 0 0 chr5 4971722 4971875 -198113657 + AluSq SINE Alu 153 305 -8 200 173 19 19 chr5 4971889 4971941 -198113591 + T-rich Low_complexity Low_complexity 2 53 0 231 353 7 0 chr5 4972685 4972821 -198112711 + (CA)n Simple_repeat Simple_repeat 1 137 0 1381 178 67 38 chr5 4973072 4973277 -198112255 - MER47A DNA MER2_type -1969 354 134 642 222 0 0 chr5 4973277 4973394 -198112138 + FLAM_C SINE Alu 1 117 -16 1381 178 67 38 chr5 4973394 4973531 -198112001 - MER47A DNA MER2_type -2189 134 2 300 316 89 41 chr5 4974687 4975149 -198110383 + L1MC/D LINE L1 5254 5737 -2071 357 291 96 25 chr5 4976588 4976787 -198108745 + MIR SINE MIR 32 244 -18 1552 209 3 0 chr5 4977669 4978127 -198107405 - AluJo SINE Alu 0 465 7 5730 123 22 2 chr5 4978144 4979019 -198106513 + L1PA13 LINE L1 5279 6160 -3 240 60 80 0 chr5 4979652 4979702 -198105830 + (CAAA)n Simple_repeat Simple_repeat 2 55 0 2106 94 7 0 chr5 4979703 4979979 -198105553 - AluSp SINE Alu -35 278 1 810 193 92 18 chr5 4981095 4981313 -198104219 + MER96B DNA MER1_type? 3 236 -181 247 179 30 15 chr5 4981482 4981549 -198103983 + (CATATA)n Simple_repeat Simple_repeat 2 69 0 2726 211 58 53 chr5 4983163 4984043 -198101489 + L1ME2 LINE L1 5280 6163 -1 327 346 0 7 chr5 4984647 4984783 -198100749 - L2 LINE L2 0 3272 3138 2022 116 16 7 chr5 4985333 4985636 -198099896 - AluSc SINE Alu -1 308 3 1741 168 0 29 chr5 4987742 4988058 -198097474 - AluJb SINE Alu -5 307 1 398 304 7 15 chr5 4988852 4988987 -198096545 - MIR SINE MIR -55 153 20 184 276 161 0 chr5 4990588 4990675 -198094857 - MIR SINE MIR -131 131 31 276 204 0 0 chr5 4992364 4992418 -198093114 - L1PA11 LINE L1 -1028 5118 5065 5800 130 16 4 chr5 4992418 4993453 -198092079 + L1PA11 LINE L1 5129 6174 0 231 387 15 0 chr5 4993725 4993862 -198091670 + MIR SINE MIR 17 155 -107 501 198 0 0 chr5 4994543 4994644 -198090888 - AluJb SINE Alu 0 312 212 2197 118 0 3 chr5 4996295 4996591 -198088941 - AluSx SINE Alu -17 295 1 2228 174 46 16 chr5 4996739 4997240 -198088292 - L1MA9 LINE L1 -6 6306 5791 458 265 53 0 chr5 4997095 4997265 -198088267 - L1PA15 LINE L1 -227 5938 5760 459 246 49 0 chr5 4997391 4997513 -198088019 - MIR SINE MIR -71 191 64 353 125 0 0 chr5 4997554 4997610 -198087922 - U2 snRNA snRNA -128 60 5 5002 146 3 8 chr5 4997610 4998491 -198087041 + L1PA10 LINE L1 4088 4964 -1182 1934 133 47 9 chr5 4998494 4998833 -198086699 - THE1C LTR MaLR -23 352 1 6342 92 8 1 chr5 4998841 5000017 -198085515 + L1PA10 LINE L1 4966 6157 -11 2591 42 0 6 chr5 5001796 5002109 -198083423 + AluY SINE Alu 1 311 0 24 0 0 0 chr5 5004334 5004358 -198081174 + AT_rich Low_complexity Low_complexity 1 24 0 5080 19 3 0 chr5 5006544 5007133 -198078399 + L1PA3 LINE L1 5565 6155 0 34 24 0 0 chr5 5007137 5007178 -198078354 + AT_rich Low_complexity Low_complexity 1 41 0 2449 183 41 33 chr5 5008086 5008590 -198076942 + MLT2B3 LTR ERVL 2 512 -42 435 100 0 0 chr5 5008590 5008660 -198076872 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 2449 183 41 33 chr5 5008660 5008696 -198076836 + MLT2B3 LTR ERVL 512 546 -8 262 236 0 22 chr5 5008697 5008786 -198076746 + (CATATA)n Simple_repeat Simple_repeat 6 92 0 753 209 0 37 chr5 5008813 5008976 -198076556 - MER2 DNA MER2_type -183 162 6 279 272 172 28 chr5 5009959 5010139 -198075393 + MLT1H LTR MaLR 79 284 -265 2055 111 50 10 chr5 5010573 5010871 -198074661 - AluSg SINE Alu 0 310 1 27 62 0 0 chr5 5011176 5011224 -198074308 + AT_rich Low_complexity Low_complexity 1 48 0 877 238 49 8 chr5 5011371 5011615 -198073917 + LTR53 LTR ERVL 1 254 -265 406 177 62 9 chr5 5011619 5011732 -198073800 + MLT1A1 LTR MaLR 5 123 -242 1138 216 0 4 chr5 5011932 5012177 -198073355 + MLT1A1 LTR MaLR 122 365 0 1028 203 103 0 chr5 5012180 5012422 -198073110 + LTR53 LTR ERVL 253 519 0 2385 104 0 0 chr5 5013249 5013558 -198071974 - AluSx SINE Alu -3 309 1 309 89 0 0 chr5 5013622 5013638 -198071894 + (CA)n Simple_repeat Simple_repeat 1 61 0 309 89 0 0 chr5 5013638 5013683 -198071849 + (CA)n Simple_repeat Simple_repeat 2 46 0 1145 279 91 66 chr5 5013709 5014806 -198070726 - L1MCc LINE L1 -4403 2719 1651 396 0 0 0 chr5 5014806 5014850 -198070682 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 1145 279 91 66 chr5 5014850 5015745 -198069787 - L1MCc LINE L1 -5471 1651 457 1147 289 63 20 chr5 5016034 5016591 -198068941 - L1MCc LINE L1 -5824 599 19 318 203 14 40 chr5 5016611 5016666 -198068866 + L2 LINE L2 3234 3288 -25 2437 76 0 25 chr5 5016666 5016981 -198068551 - AluY SINE Alu -4 307 1 318 203 14 40 chr5 5016981 5016999 -198068533 + L2 LINE L2 3288 3305 -8 214 200 0 0 chr5 5017714 5017754 -198067778 + T-rich Low_complexity Low_complexity 1 40 0 289 230 40 0 chr5 5019519 5019593 -198065939 + MER89 LTR ERV1 11 87 -472 * 1476 214 14 6 chr5 5019568 5019928 -198065604 + MER89 LTR ERV1 197 559 0 40 0 0 0 chr5 5021604 5021644 -198063888 + AT_rich Low_complexity Low_complexity 1 40 0 216 0 0 0 chr5 5022638 5022662 -198062870 + (CCCA)n Simple_repeat Simple_repeat 2 25 0 431 333 6 0 chr5 5023333 5023498 -198062034 - MER63B DNA MER1_type -270 166 1 2194 114 0 0 chr5 5023791 5024088 -198061444 - AluSx SINE Alu -15 297 1 21 0 0 0 chr5 5024629 5024650 -198060882 + AT_rich Low_complexity Low_complexity 1 21 0 452 84 0 14 chr5 5024707 5024778 -198060754 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 232 235 23 68 chr5 5024780 5024912 -198060620 + L1 LINE L1 3797 3922 -2224 586 306 108 54 chr5 5024941 5025516 -198060016 + L1ME3 LINE L1 3949 4554 -1592 590 292 70 46 chr5 5026440 5027476 -198058056 + L1ME3 LINE L1 4800 5858 -304 1816 205 30 5 chr5 5027494 5027898 -198057634 + MLT2C2 LTR ERVL 3 416 -48 1328 185 110 31 chr5 5028181 5028500 -198057032 + MER2 DNA MER2_type 1 344 0 1063 144 0 12 chr5 5028507 5028698 -198056834 - AluSg/x SINE Alu 0 312 134 2048 140 0 0 chr5 5028698 5028990 -198056542 - AluSg SINE Alu -17 293 2 538 264 42 14 chr5 5029292 5029436 -198056096 - MER5B DNA MER1_type -12 166 19 45 34 0 0 chr5 5030364 5030423 -198055109 + AT_rich Low_complexity Low_complexity 1 59 0 404 242 30 0 chr5 5032829 5032928 -198052604 + MIR SINE MIR 110 211 -51 1114 305 32 29 chr5 5032944 5033386 -198052146 - L2 LINE L2 -1045 2269 1827 1983 154 0 3 chr5 5033628 5033927 -198051605 + AluSx SINE Alu 1 298 -14 2679 225 72 115 chr5 5034355 5035770 -198049762 - MLT1A1-int LTR MaLR -13 1358 5 1326 227 16 40 chr5 5035774 5036148 -198049384 - MLT1A1 LTR MaLR 0 365 1 2107 218 67 19 chr5 5036168 5036666 -198048866 - MLT1E1 LTR MaLR -11 643 109 1778 201 41 41 chr5 5036666 5037133 -198048399 + MLT1C LTR MaLR 1 467 0 2107 218 67 19 chr5 5037133 5037248 -198048284 - MLT1E1 LTR MaLR -545 109 1 2486 119 11 0 chr5 5037378 5037749 -198047783 + THE1C LTR MaLR 1 375 0 358 240 16 8 chr5 5037781 5037874 -198047658 + MIR3 SINE MIR 105 199 -9 21 57 0 0 chr5 5038347 5038382 -198047150 + AT_rich Low_complexity Low_complexity 1 35 0 240 176 0 0 chr5 5038414 5038482 -198047050 + (TA)n Simple_repeat Simple_repeat 1 68 0 386 176 0 35 chr5 5039732 5039817 -198045715 - MER3 DNA MER1_type -2 207 126 957 161 57 0 chr5 5039820 5040031 -198045501 + L1MB3 LINE L1 5669 5891 -292 810 198 21 66 chr5 5040096 5040384 -198045148 - L1MA4 LINE L1 -1 6299 6025 195 267 35 69 chr5 5040568 5040684 -198044848 - MIR SINE MIR -116 146 35 28 0 0 0 chr5 5041918 5041946 -198043586 + AT_rich Low_complexity Low_complexity 1 28 0 3348 207 7 7 chr5 5042077 5042830 -198042702 - L1 LINE L1 -1884 4262 3510 4627 176 47 7 chr5 5042837 5044039 -198041493 + L1PA16 LINE L1 4900 6159 -7 2170 117 48 31 chr5 5045313 5045671 -198039861 - THE1B LTR MaLR 0 364 1 320 357 24 18 chr5 5045681 5045849 -198039683 + MIR SINE MIR 66 234 -28 243 290 117 51 chr5 5046345 5046559 -198038973 - L2 LINE L2 -812 2502 2275 1845 131 25 0 chr5 5246696 5246978 -197838554 - AluY SINE Alu -22 289 1 547 193 82 7 chr5 5247746 5247881 -197837651 + Charlie4 DNA MER1_type 5 149 -1812 230 208 125 0 chr5 5248218 5248290 -197837242 + L2 LINE L2 1135 1215 -2099 1346 262 105 62 chr5 5248299 5248701 -197836831 + L2 LINE L2 1326 1709 -1605 2088 113 3 0 chr5 5248701 5249001 -197836531 - AluSq SINE Alu -12 301 1 1346 262 105 62 chr5 5249001 5249075 -197836457 + L2 LINE L2 1709 1778 -1536 2057 148 0 0 chr5 5249075 5249386 -197836146 - AluSx SINE Alu -1 311 1 1346 262 105 62 chr5 5249386 5249756 -197835776 + L2 LINE L2 1778 2209 -1105 1672 118 0 0 chr5 5249786 5250024 -197835508 + AluSx SINE Alu 56 293 -19 2061 204 37 19 chr5 5250062 5250494 -197835038 + MER82 DNA MER2_type 37 476 -177 1465 186 45 13 chr5 5250514 5250829 -197834703 - MLT1A1 LTR MaLR -36 431 1 233 235 0 141 chr5 5250898 5250927 -197834605 + MER82 DNA MER2_type 581 612 -41 2230 97 0 3 chr5 5250927 5251226 -197834306 + AluSq SINE Alu 1 298 -15 233 235 0 141 chr5 5251226 5251281 -197834251 + MER82 DNA MER2_type 612 653 0 2035 262 85 19 chr5 5251290 5251735 -197833797 + L2 LINE L2 2227 2641 -672 1603 166 49 11 chr5 5251735 5252019 -197833513 - AluJo SINE Alu -17 295 1 2035 262 85 19 chr5 5252019 5252589 -197832943 + L2 LINE L2 2641 3313 0 287 248 176 0 chr5 5252591 5252744 -197832788 - L1M4 LINE L1 -1303 4843 4664 1743 203 15 3 chr5 5252765 5253090 -197832442 + MLT1A1 LTR MaLR 36 364 -1 488 256 84 59 chr5 5253090 5253293 -197832239 - L1MEd LINE L1 -3044 3085 2878 2252 89 7 3 chr5 5253465 5253768 -197831764 - AluSq SINE Alu -9 304 1 1370 183 36 36 chr5 5253801 5254102 -197831430 + AluJb SINE Alu 3 303 -9 489 174 12 0 chr5 5254162 5254248 -197831284 + HY1 scRNA scRNA 1 87 -25 356 306 113 18 chr5 5254377 5254606 -197830926 - L1MEd LINE L1 -5361 758 508 2614 23 3 0 chr5 5254620 5254930 -197830602 - AluY SINE Alu 0 311 1 21 36 0 0 chr5 5256712 5256740 -197828792 + AT_rich Low_complexity Low_complexity 1 28 0 1851 115 39 11 chr5 5257827 5258113 -197827419 + AluSq SINE Alu 1 294 -19 347 239 142 45 chr5 5259464 5259619 -197825913 - MIR SINE MIR -87 175 6 1333 167 123 0 chr5 5260442 5260718 -197824814 + MER2 DNA MER2_type 10 319 -26 771 222 81 0 chr5 5261124 5261309 -197824223 + Charlie1a DNA MER1_type 5 204 -1251 1529 168 28 7 chr5 5261335 5261620 -197823912 + AluJo SINE Alu 1 291 -21 1119 154 254 7 chr5 5261621 5261900 -197823632 + Charlie1a DNA MER1_type 739 1086 -369 1282 168 16 29 chr5 5261915 5262159 -197823373 + AluJo SINE Alu 1 241 -71 3878 137 49 25 chr5 5262160 5262301 -197823231 - MER50 LTR ERV1 -23 711 575 2181 101 0 7 chr5 5262301 5262609 -197822923 + AluSx SINE Alu 1 306 -6 3878 137 49 25 chr5 5262609 5263161 -197822371 - MER50 LTR ERV1 -159 575 1 396 138 0 0 chr5 5263161 5263219 -197822313 + AluJo SINE Alu 238 295 -7 1706 226 96 35 chr5 5263506 5263737 -197821795 + MLT1E2 LTR MaLR 1 216 -410 1850 131 30 0 chr5 5263737 5264035 -197821497 + AluSx SINE Alu 1 307 -5 1706 226 96 35 chr5 5264035 5264391 -197821141 + MLT1E2 LTR MaLR 216 619 -7 371 342 45 42 chr5 5264540 5264612 -197820920 + MLT1I LTR MaLR 44 114 -295 3138 122 75 58 chr5 5264612 5265081 -197820451 + MER39B LTR ERV1 5 489 -164 1629 155 30 0 chr5 5265081 5265352 -197820180 + AluJo SINE Alu 12 290 -22 3138 122 75 58 chr5 5265352 5265519 -197820013 + MER39B LTR ERV1 489 652 -1 371 342 45 42 chr5 5265519 5265759 -197819773 + MLT1I LTR MaLR 114 357 -52 1635 176 0 31 chr5 5265860 5266178 -197819354 + AluJb SINE Alu 1 308 -4 1419 171 89 0 chr5 5266652 5266910 -197818622 - MER50 LTR ERV1 -23 711 431 668 80 23 0 chr5 5266921 5267009 -197818523 - THE1C LTR MaLR -285 90 1 1751 123 31 0 chr5 5267353 5267613 -197817919 - MER50 LTR ERV1 -466 268 1 280 238 60 24 chr5 5268206 5268290 -197817242 + MLT1L LTR MaLR 527 613 -2 2804 101 0 5 chr5 5268476 5268853 -197816679 - THE1C LTR MaLR 0 375 1 986 216 96 96 chr5 5269385 5269853 -197815679 - LTR34 LTR ERV1 -4 695 136 435 180 72 18 chr5 5269931 5270042 -197815490 - MER4A LTR ERV1 -547 117 1 351 261 45 9 chr5 5270144 5270255 -197815277 + Charlie5 DNA MER1_type 34 148 -2464 2157 99 10 0 chr5 5270257 5270559 -197814973 + AluSx SINE Alu 1 305 -7 2330 187 57 41 chr5 5270565 5270918 -197814614 + Charlie5 DNA MER1_type 1975 2344 -280 2045 126 10 0 chr5 5270918 5271220 -197814312 - AluSx SINE Alu -7 305 1 2330 187 57 41 chr5 5271220 5271476 -197814056 + Charlie5 DNA MER1_type 2344 2594 -30 231 217 0 0 chr5 5271960 5272006 -197813526 - MIR SINE MIR -115 147 102 4907 161 48 9 chr5 5272010 5272872 -197812660 - MER54A LTR ERVL -6 895 1 2255 85 7 0 chr5 5273372 5273667 -197811865 - AluSx SINE Alu -15 297 1 1876 146 0 10 chr5 5273741 5274066 -197811466 - AluSx SINE Alu 0 312 1 2052 116 0 0 chr5 5274605 5274899 -197810633 - AluSx SINE Alu -18 294 1 1590 180 3 10 chr5 5275048 5275343 -197810189 - AluJo SINE Alu -19 293 1 2186 108 0 0 chr5 5275703 5276009 -197809523 + AluSx SINE Alu 1 306 -6 1813 152 13 3 chr5 5276326 5276629 -197808903 + AluJb SINE Alu 1 306 -6 2225 84 0 7 chr5 5276637 5276934 -197808598 + AluSg SINE Alu 3 297 -13 1768 113 55 4 chr5 5277321 5277595 -197807937 + AluSx SINE Alu 1 288 -24 2185 144 34 3 chr5 5278255 5278610 -197806922 + MER47A DNA MER2_type 1 366 0 1745 169 3 13 chr5 5278814 5278996 -197806536 - AluJo SINE Alu -1 311 132 2150 105 7 0 chr5 5278996 5279292 -197806240 - AluSg SINE Alu -12 298 1 1745 169 3 13 chr5 5279292 5279423 -197806109 - AluJo SINE Alu -180 132 1 2102 125 0 3 chr5 5279511 5279816 -197805716 - AluJb SINE Alu 0 312 9 246 232 295 11 chr5 5279896 5279991 -197805541 - MIR SINE MIR -55 153 32 1408 116 61 2 chr5 5280987 5281225 -197804307 + L1PB3 LINE L1 5663 5908 -246 328 324 14 28 chr5 5282416 5282561 -197802971 - MIR SINE MIR -35 227 85 377 281 57 62 chr5 5282656 5282866 -197802666 - MIR SINE MIR -43 219 11 1447 58 48 14 chr5 5283778 5283985 -197801547 - AluSq SINE Alu -21 292 79 315 281 86 97 chr5 5284121 5284481 -197801051 + L1M4c LINE L1 947 1302 -5082 352 301 18 0 chr5 5284481 5284621 -197800911 + GA-rich Low_complexity Low_complexity 1 142 0 411 212 24 0 chr5 5285811 5285896 -197799636 + MIR3 SINE MIR 73 159 -49 200 205 0 0 chr5 5286289 5286328 -197799204 + (CAT)n Simple_repeat Simple_repeat 1 39 0 23 0 0 0 chr5 5287650 5287673 -197797859 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr5 5287739 5287783 -197797749 + AT_rich Low_complexity Low_complexity 1 44 0 201 244 0 0 chr5 5287806 5287851 -197797681 + (TGAA)n Simple_repeat Simple_repeat 1 45 0 1127 259 84 39 chr5 5288613 5288995 -197796537 - L3 LINE CR1 -108 1469 1071 1781 122 0 11 chr5 5289051 5289313 -197796219 + AluSx SINE Alu 1 259 -53 473 320 39 6 chr5 5290665 5290843 -197794689 + MIR3 SINE MIR 25 208 0 718 112 0 90 chr5 5290872 5291006 -197794526 - AluSx SINE Alu 0 310 189 938 106 0 8 chr5 5291017 5291149 -197794383 - AluSx SINE Alu -176 137 7 1375 190 58 48 chr5 5291228 5291607 -197793925 - MLT1C LTR MaLR 0 467 85 1960 125 0 10 chr5 5291895 5292190 -197793342 + AluSx SINE Alu 12 303 -9 273 280 109 7 chr5 5292266 5292405 -197793127 + MIR SINE MIR 16 164 -69 34 24 0 0 chr5 5292506 5292547 -197792985 + AT_rich Low_complexity Low_complexity 1 41 0 27 29 0 0 chr5 5293069 5293103 -197792429 + AT_rich Low_complexity Low_complexity 1 34 0 2239 102 3 0 chr5 5293485 5293789 -197791743 - AluSc SINE Alu -4 305 1 301 33 7 7 chr5 5294028 5294079 -197791453 - MADE1 DNA Mariner 0 80 47 581 278 39 42 chr5 5294172 5294378 -197791154 - MIR SINE MIR -57 205 1 193 169 68 34 chr5 5294502 5294561 -197790971 - MIR SINE MIR -36 226 166 306 248 57 38 chr5 5295106 5295211 -197790321 - L1ME4a LINE L1 -3 6118 6012 414 301 28 21 chr5 5295465 5295608 -197789924 - MIR3 SINE MIR -46 162 19 223 217 29 29 chr5 5296213 5296282 -197789250 + T-rich Low_complexity Low_complexity 4 72 0 21 0 0 0 chr5 5298423 5298444 -197787088 + AT_rich Low_complexity Low_complexity 1 21 0 183 273 18 18 chr5 5298487 5298542 -197786990 - MIR3 SINE MIR -144 64 10 2184 100 7 3 chr5 5299017 5299308 -197786224 + AluSx SINE Alu 1 292 -20 23 0 0 0 chr5 5301838 5301861 -197783671 + AT_rich Low_complexity Low_complexity 1 23 0 1595 195 10 0 chr5 5303573 5303697 -197781835 + AluJb SINE Alu 3 124 -188 369 0 0 0 chr5 5303697 5303738 -197781794 + (CA)n Simple_repeat Simple_repeat 2 42 0 1595 195 10 0 chr5 5303738 5303905 -197781627 + AluJb SINE Alu 124 297 -15 2107 131 7 0 chr5 5304236 5304533 -197780999 + AluSx SINE Alu 2 300 -12 1918 122 0 48 chr5 5304924 5305235 -197780297 - AluSx SINE Alu -16 296 1 820 159 0 57 chr5 5305263 5305420 -197780112 - AluJo SINE Alu -154 158 11 213 267 0 0 chr5 5306232 5306277 -197779255 - L2 LINE L2 -8 3305 3261 208 234 0 21 chr5 5306353 5306400 -197779132 + CT-rich Low_complexity Low_complexity 3 48 0 667 232 53 2 chr5 5306421 5306579 -197778953 - MIR SINE MIR -44 164 2 432 298 68 12 chr5 5307696 5307857 -197777675 - MIR3 SINE MIR -1 207 38 1304 153 23 23 chr5 5308107 5308323 -197777209 + AluJb SINE Alu 1 216 -96 418 167 127 40 chr5 5308323 5308449 -197777083 + Charlie5 DNA MER1_type 2447 2583 -29 187 301 63 56 chr5 5308463 5308606 -197776926 - L2 LINE L2 -1321 1993 1850 2475 147 26 5 chr5 5310352 5310775 -197774757 + Tigger2a DNA MER2_type 2 433 -1 2016 145 3 20 chr5 5311188 5311491 -197774041 + AluJb SINE Alu 2 299 -13 362 153 0 0 chr5 5312654 5312713 -197772819 - Alu SINE Alu -6 296 238 2660 139 56 20 chr5 5312713 5313266 -197772266 + MER50 LTR ERV1 1 573 -161 2188 104 0 10 chr5 5313266 5313575 -197771957 - AluSx SINE Alu -6 306 1 1771 170 10 35 chr5 5313868 5314180 -197771352 - AluJb SINE Alu -8 304 1 187 364 35 77 chr5 5314210 5314353 -197771179 - L2 LINE L2 -8 3264 3128 606 154 0 0 chr5 5314612 5314716 -197770816 + AluJb SINE Alu 202 305 -7 796 226 0 6 chr5 5315750 5315914 -197769618 - MER45A DNA AcHobo -15 163 1 590 115 0 21 chr5 5317480 5317576 -197767956 + FLAM_C SINE Alu 44 137 -6 530 169 22 88 chr5 5319088 5319224 -197766308 + L2 LINE L2 2731 2857 -457 1605 93 115 33 chr5 5319227 5319497 -197766035 + LTR9 LTR ERV1 1 292 -320 1646 105 4 13 chr5 5319497 5319726 -197765806 - AluSx SINE Alu -85 227 1 606 188 150 0 chr5 5319726 5319859 -197765673 + MER2 DNA MER2_type 193 345 0 2008 129 3 7 chr5 5319884 5320171 -197765361 - AluSx SINE Alu -26 286 1 1506 221 4 0 chr5 5321597 5321873 -197763659 - AluJo SINE Alu -14 298 22 256 316 40 0 chr5 5322571 5322647 -197762885 + MIR SINE MIR 30 108 -100 22 0 0 0 chr5 5323962 5323984 -197761548 + AT_rich Low_complexity Low_complexity 1 22 0 199 77 26 26 chr5 5324628 5324667 -197760865 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 355 367 190 29 chr5 5325628 5325939 -197759593 + L2 LINE L2 2910 3270 -2 468 320 82 5 chr5 5326116 5326310 -197759222 + MIR SINE MIR 1 209 -53 356 211 100 0 chr5 5326387 5326477 -197759055 - L1MC2 LINE L1 -29 6315 6217 1695 144 39 10 chr5 5326526 5326832 -197758700 - MER2 DNA MER2_type 0 345 31 200 33 0 33 chr5 5330283 5330313 -197755219 + (CA)n Simple_repeat Simple_repeat 1 29 0 216 0 0 0 chr5 5332830 5332854 -197752678 + (A)n Simple_repeat Simple_repeat 1 24 0 1939 93 4 0 chr5 5333521 5333791 -197751741 + L1PA8 LINE L1 5902 6172 0 601 287 79 14 chr5 5336202 5336418 -197749114 - MIR SINE MIR -1 261 32 579 203 8 8 chr5 5337389 5337507 -197748025 + L2 LINE L2 2680 2797 -517 289 210 37 0 chr5 5337543 5337624 -197747908 + (TA)n Simple_repeat Simple_repeat 2 85 0 401 81 0 40 chr5 5337641 5337715 -197747817 + MADE1 DNA Mariner 10 80 0 505 255 43 140 chr5 5337740 5338112 -197747420 + L2 LINE L2 2851 3186 -127 321 313 61 0 chr5 5340597 5340696 -197744836 + L2 LINE L2 3159 3263 -9 1292 198 55 32 chr5 5342043 5342391 -197743141 + MLT1A2 LTR MaLR 1 356 -18 270 194 0 0 chr5 5345003 5345065 -197740467 + (TGAA)n Simple_repeat Simple_repeat 1 62 0 4433 70 20 2 chr5 5345124 5345736 -197739796 + L1PA8A LINE L1 5482 6104 -27 1741 153 10 27 chr5 5345852 5346146 -197739386 + AluJb SINE Alu 1 289 -23 215 40 60 20 chr5 5347263 5347313 -197738219 + (CA)n Simple_repeat Simple_repeat 2 53 0 189 0 0 0 chr5 5348275 5348296 -197737236 + (A)n Simple_repeat Simple_repeat 1 21 0 288 0 0 0 chr5 5349103 5349135 -197736397 + (A)n Simple_repeat Simple_repeat 1 32 0 22 56 0 0 chr5 5351150 5351186 -197734346 + AT_rich Low_complexity Low_complexity 1 36 0 1579 199 14 0 chr5 5351186 5351472 -197734060 - AluJo SINE Alu -22 290 1 2372 108 0 13 chr5 5353394 5353710 -197731822 + AluSx SINE Alu 1 312 0 1122 209 158 73 chr5 5356080 5356587 -197728945 - MLT1F1 LTR MaLR -23 544 1 2241 106 7 3 chr5 5359445 5359746 -197725786 - AluSq SINE Alu -11 302 1 446 314 64 29 chr5 5359817 5360021 -197725511 + Charlie8 DNA MER1_type 4 214 -2203 474 18 0 0 chr5 5361921 5361976 -197723556 + (TA)n Simple_repeat Simple_repeat 1 55 0 2297 89 0 7 chr5 5361976 5362268 -197723264 - AluSq SINE Alu -21 292 3 962 184 128 28 chr5 5362272 5362522 -197723010 + MSTB1 LTR MaLR 156 430 -2 719 234 52 16 chr5 5367015 5367207 -197718325 - MER113 DNA MER1_type? -54 467 269 462 220 43 14 chr5 5367263 5367404 -197718128 - MER113 DNA MER1_type? -371 150 6 798 230 73 0 chr5 5369047 5369251 -197716281 + MIR SINE MIR 34 252 -10 548 217 14 29 chr5 5373218 5373356 -197712176 - MIR SINE MIR -109 153 18 309 51 0 0 chr5 5373356 5373395 -197712137 + (A)n Simple_repeat Simple_repeat 1 39 0 2123 98 3 10 chr5 5374726 5375021 -197710511 - AluSq SINE Alu -19 294 2 21 0 0 0 chr5 5375204 5375225 -197710307 + AT_rich Low_complexity Low_complexity 1 21 0 214 295 124 23 chr5 5376275 5376404 -197709128 + L2 LINE L2 3171 3312 -1 372 254 68 34 chr5 5376662 5376780 -197708752 + L2 LINE L2 3143 3264 -8 1999 127 3 7 chr5 5377617 5377909 -197707623 - AluSg SINE Alu -19 291 1 2037 137 10 0 chr5 5378096 5378389 -197707143 - AluSx SINE Alu -16 296 1 2502 186 21 13 chr5 5378693 5379161 -197706371 + MER70A LTR ERVL 1 472 0 543 239 0 0 chr5 5379168 5379313 -197706219 - FLAM_A SINE Alu 0 145 1 186 133 0 0 chr5 5380220 5380250 -197705282 + (TTCC)n Simple_repeat Simple_repeat 1 30 0 2181 101 4 0 chr5 5380250 5380527 -197705005 - AluSq SINE Alu -33 280 3 21 26 0 26 chr5 5380744 5380763 -197704769 + AT_rich Low_complexity Low_complexity 1 19 -19 2136 117 0 7 chr5 5380763 5381053 -197704479 - AluSx SINE Alu -24 288 1 21 26 0 26 chr5 5381053 5381072 -197704460 + AT_rich Low_complexity Low_complexity 19 38 0 2271 79 21 0 chr5 5381635 5381925 -197703607 + AluSx SINE Alu 1 296 -16 189 0 0 0 chr5 5382452 5382473 -197703059 + (CAAAAA)n Simple_repeat Simple_repeat 2 22 0 583 238 77 0 chr5 5382735 5382903 -197702629 - MIR SINE MIR -71 191 11 3765 141 106 83 chr5 5382982 5384011 -197701521 + pTR5 LTR ERV1 742 2025 -413 402 185 34 27 chr5 5384011 5384122 -197701410 + LTR30 LTR ERV1 375 642 -80 2177 115 3 0 chr5 5384122 5384435 -197701097 + pTR5 LTR ERV1 79 392 -2046 2170 92 28 57 chr5 5384966 5385283 -197700249 + AluSq SINE Alu 6 313 0 1779 164 28 104 chr5 5386587 5386844 -197698688 - MER45B DNA AcHobo -543 1038 832 2307 97 0 0 chr5 5386844 5387132 -197698400 - AluSx SINE Alu -24 288 1 1779 164 28 104 chr5 5387132 5387343 -197698189 - MER45B DNA AcHobo -749 832 606 1234 256 93 0 chr5 5387361 5387662 -197697870 - MER45B DNA AcHobo -711 329 1 531 31 0 0 chr5 5387863 5387928 -197697604 + (TATG)n Simple_repeat Simple_repeat 4 68 0 193 278 133 0 chr5 5389537 5389627 -197695905 - MIR SINE MIR -48 214 113 252 167 0 0 chr5 5389670 5389712 -197695820 + MER2 DNA MER2_type 1 42 -303 462 177 0 0 chr5 5389713 5389792 -197695740 + MER2 DNA MER2_type 1 79 -266 662 152 27 0 chr5 5389947 5390059 -197695473 + FLAM_A SINE Alu 20 134 -8 1961 115 10 20 chr5 5390139 5390435 -197695097 - AluSx SINE Alu -19 293 1 24 0 0 0 chr5 5390533 5390557 -197694975 + AT_rich Low_complexity Low_complexity 1 24 0 1282 100 11 11 chr5 5390847 5391027 -197694505 - AluSg/x SINE Alu -13 299 120 284 185 19 0 chr5 5391346 5391400 -197694132 + MER20 DNA MER1_type 159 213 -6 201 290 32 0 chr5 5392335 5392397 -197693135 + L2 LINE L2 2905 2968 -345 333 0 0 0 chr5 5393544 5393581 -197691951 + (T)n Simple_repeat Simple_repeat 1 37 0 510 239 28 34 chr5 5393888 5394064 -197691468 + MIR SINE MIR 18 192 -70 189 200 40 0 chr5 5394114 5394164 -197691368 - MIR SINE MIR -144 118 67 1685 117 58 21 chr5 5394196 5394487 -197691045 - AluSx SINE Alu -9 303 2 829 128 15 0 chr5 5394785 5394918 -197690614 + FRAM SINE Alu 18 152 -24 1694 143 4 19 chr5 5395867 5396125 -197689407 + AluJo SINE Alu 34 287 -25 1775 180 29 45 chr5 5396818 5397006 -197688526 + L1MB8 LINE L1 5757 5946 -232 2040 117 3 43 chr5 5397006 5397331 -197688201 - AluSx SINE Alu 0 312 1 1775 180 29 45 chr5 5397331 5397571 -197687961 + L1MB8 LINE L1 5946 6177 -1 974 182 6 0 chr5 5397717 5397876 -197687656 - AluJb SINE Alu -15 297 138 870 73 15 15 chr5 5397994 5398131 -197687401 + (GGAA)n Simple_repeat Simple_repeat 2 138 0 2416 82 0 25 chr5 5398222 5398541 -197686991 + AluSx SINE Alu 2 312 0 1903 183 64 43 chr5 5398542 5398793 -197686739 - MER74A LTR ERVL -111 447 203 1838 146 58 18 chr5 5398793 5399123 -197686409 + MER61A LTR ERV1 1 343 0 1903 183 64 43 chr5 5399123 5399289 -197686243 - MER74A LTR ERVL -355 203 18 2200 131 3 6 chr5 5399289 5399601 -197685931 + AluSx SINE Alu 1 311 -1 1903 183 64 43 chr5 5399601 5399620 -197685912 - MER74A LTR ERVL -540 18 1 1418 214 79 43 chr5 5399620 5400005 -197685527 - MLT1F1 LTR MaLR -41 526 132 2309 149 81 2 chr5 5400005 5400402 -197685130 - MSTC LTR MaLR 0 428 1 1418 214 79 43 chr5 5400402 5400518 -197685014 - MLT1F1 LTR MaLR -435 132 22 450 239 127 21 chr5 5400535 5400677 -197684855 - MSTC-int LTR MaLR 0 1371 1215 1566 142 0 73 chr5 5400891 5401193 -197684339 + AluJb SINE Alu 1 280 -32 341 341 121 0 chr5 5401223 5401396 -197684136 - MSTC-int LTR MaLR -486 885 692 983 141 29 73 chr5 5401637 5401843 -197683689 + MSTB LTR MaLR 1 197 -229 1398 177 4 4 chr5 5401851 5402099 -197683433 + AluJb SINE Alu 22 269 -43 1380 150 4 45 chr5 5402108 5402374 -197683158 - AluJo SINE Alu -57 255 1 287 125 0 0 chr5 5402374 5402414 -197683118 + MSTB LTR MaLR 389 428 0 675 292 68 13 chr5 5402414 5402722 -197682810 - MSTC-int LTR MaLR -770 601 277 840 200 36 0 chr5 5402737 5402902 -197682630 + FRAM SINE Alu 1 171 -5 293 248 147 8 chr5 5402910 5403039 -197682493 - MSTC-int LTR MaLR -1221 150 4 1110 261 105 51 chr5 5403051 5403362 -197682170 - MLT1F LTR MaLR 0 542 249 201 108 0 0 chr5 5403362 5403399 -197682133 + (CA)n Simple_repeat Simple_repeat 2 38 0 1110 261 105 51 chr5 5403399 5403475 -197682057 - MLT1F LTR MaLR -293 249 179 2220 107 50 50 chr5 5403475 5403573 -197681959 + THE1B LTR MaLR 1 98 -266 2125 112 0 3 chr5 5403573 5403869 -197681663 - AluSq SINE Alu -18 295 1 2220 107 50 50 chr5 5403869 5404134 -197681398 + THE1B LTR MaLR 97 364 0 1110 261 105 51 chr5 5404134 5404259 -197681273 - MLT1F LTR MaLR -363 179 1 243 191 87 95 chr5 5404312 5404438 -197681094 + L1MC4 LINE L1 7918 8042 0 1079 134 31 76 chr5 5405189 5405412 -197680120 + AluJb SINE Alu 86 298 -14 1287 131 149 62 chr5 5405617 5405655 -197679877 - MSTC LTR MaLR 0 365 332 1958 121 0 0 chr5 5405655 5405971 -197679561 + AluSx SINE Alu 1 316 0 1287 131 149 62 chr5 5405971 5406267 -197679265 - MSTC LTR MaLR -33 332 1 482 208 10 10 chr5 5406309 5406405 -197679127 + MLT2F LTR ERVL 1 96 -567 2179 105 0 22 chr5 5406532 5406847 -197678685 + AluSx SINE Alu 1 308 -4 873 163 7 13 chr5 5406852 5407048 -197678484 + FRAM SINE Alu 1 176 0 444 259 5 53 chr5 5407199 5407388 -197678144 + CT-rich Low_complexity Low_complexity 1 180 0 273 302 9 35 chr5 5408764 5408880 -197676652 + C-rich Low_complexity Low_complexity 3 115 0 528 168 84 8 chr5 5409141 5409272 -197676260 - LTR37A LTR ERV1 0 426 286 2085 115 10 0 chr5 5409374 5409679 -197675853 + AluSx SINE Alu 5 312 0 428 190 229 45 chr5 5410275 5410454 -197675078 + LTR37A LTR ERV1 8 219 -207 671 162 0 0 chr5 5410469 5410568 -197674964 - AluJ/FLAM SINE Alu -212 100 2 3405 169 50 72 chr5 5410615 5410866 -197674666 - MER72 LTR ERV1 0 722 467 1586 166 0 30 chr5 5410866 5411161 -197674371 - AluJo SINE Alu -26 286 1 3405 169 50 72 chr5 5411161 5411633 -197673899 - MER72 LTR ERV1 -255 467 15 323 270 27 20 chr5 5411659 5411807 -197673725 + LTR37A LTR ERV1 278 426 0 4345 148 31 37 chr5 5411818 5412624 -197672908 - MER4D LTR ERV1 0 903 103 1256 146 35 22 chr5 5412648 5412874 -197672658 - AluSx SINE Alu -83 229 1 821 122 0 0 chr5 5412874 5412989 -197672543 - MER4D LTR ERV1 -788 115 1 1641 77 4 17 chr5 5413417 5413651 -197671881 + AluSg/x SINE Alu 80 310 0 354 184 116 5 chr5 5413655 5413820 -197671712 + MER21A LTR ERV1 670 929 -2 290 88 62 12 chr5 5414363 5414443 -197671089 + (TAAA)n Simple_repeat Simple_repeat 1 84 0 915 123 43 49 chr5 5414446 5414609 -197670923 - AluJo SINE Alu -38 274 113 1628 147 16 48 chr5 5414822 5415136 -197670396 - AluSx SINE Alu -8 304 1 834 193 76 0 chr5 5415136 5415307 -197670225 + MLT1F1 LTR MaLR 22 205 -362 271 156 0 0 chr5 5415334 5415379 -197670153 + MLT1F LTR MaLR 498 542 0 346 223 93 39 chr5 5415379 5415574 -197669958 - L1MC4a LINE L1 -394 7414 7193 3856 166 11 59 chr5 5416398 5417157 -197668375 - MER72 LTR ERV1 0 722 1 1904 117 0 37 chr5 5417185 5417484 -197668048 - AluSx SINE Alu -24 288 1 722 220 128 32 chr5 5417557 5417691 -197667841 - MLT1C LTR MaLR 0 467 303 2043 114 117 30 chr5 5417691 5417732 -197667800 - MSTA LTR MaLR 0 428 392 2137 107 0 32 chr5 5417732 5418042 -197667490 + AluSq SINE Alu 1 300 -13 2043 114 117 30 chr5 5418042 5418394 -197667138 - MSTA LTR MaLR -36 392 1 722 220 128 32 chr5 5418394 5418477 -197667055 - MLT1C LTR MaLR -164 303 229 578 200 57 14 chr5 5418505 5418645 -197666887 - MLT1C LTR MaLR -321 184 39 1916 138 7 0 chr5 5418716 5419012 -197666520 + AluSx SINE Alu 3 300 -12 1824 122 0 48 chr5 5419399 5419710 -197665822 - AluSx SINE Alu -16 296 1 823 147 0 57 chr5 5419738 5419895 -197665637 - AluJo SINE Alu -154 158 11 1877 155 3 0 chr5 5420351 5420647 -197664885 + AluJb SINE Alu 1 297 -15 658 190 129 95 chr5 5421136 5421368 -197664164 + MIR SINE MIR 10 249 -13 2099 157 11 11 chr5 5421700 5422048 -197663484 + MLT2C1 LTR ERVL 1 348 -49 1859 167 42 50 chr5 5422048 5422432 -197663100 - MLT1B LTR MaLR 0 390 10 380 128 64 0 chr5 5422440 5422534 -197662998 + (TCTG)n Simple_repeat Simple_repeat 1 100 0 247 137 0 137 chr5 5422534 5422607 -197662925 + MLT2C1 LTR ERVL 458 520 0 2196 111 0 7 chr5 5422718 5423025 -197662507 - AluSx SINE Alu -7 305 1 2306 74 0 3 chr5 5423087 5423383 -197662149 - AluY SINE Alu -16 295 1 2195 98 3 0 chr5 5423383 5423679 -197661853 - AluSx SINE Alu -15 297 1 591 162 0 0 chr5 5423774 5423879 -197661653 - FRAM SINE Alu -8 168 64 2164 110 3 3 chr5 5423976 5424286 -197661246 + AluSx SINE Alu 1 310 -2 21 0 0 0 chr5 5424286 5424307 -197661225 + AT_rich Low_complexity Low_complexity 1 21 0 1004 229 85 98 chr5 5424313 5424442 -197661090 + L1ME1 LINE L1 5692 5821 -345 2269 88 0 28 chr5 5424442 5424761 -197660771 - AluSg SINE Alu 0 310 1 1004 229 85 98 chr5 5424761 5425080 -197660452 + L1ME1 LINE L1 5821 6134 -32 686 151 19 0 chr5 5425081 5425187 -197660345 + FLAM_C SINE Alu 2 109 -34 1618 171 0 16 chr5 5425259 5425569 -197659963 - AluJo SINE Alu 0 312 8 1575 129 4 0 chr5 5426032 5426264 -197659268 - AluSq SINE Alu -14 299 67 447 208 50 0 chr5 5426551 5426652 -197658880 - MLT1H LTR MaLR 0 549 444 * 915 223 30 47 chr5 5426634 5426944 -197658588 - MLT1H LTR MaLR -248 307 30 199 217 0 0 chr5 5427676 5427722 -197657810 + L2 LINE L2 2911 2956 -316 226 333 0 0 chr5 5428868 5428940 -197656592 + L2 LINE L2 2902 2973 -299 2237 196 52 5 chr5 5429341 5429785 -197655747 + L1MB7 LINE L1 5579 6043 -141 1851 101 7 35 chr5 5429937 5430246 -197655286 - AluY SINE Alu 0 305 5 29 47 0 0 chr5 5431365 5431408 -197654124 + AT_rich Low_complexity Low_complexity 1 43 0 2083 186 38 53 chr5 5431408 5431531 -197654001 + MLT1D LTR MaLR 1 124 -381 2009 101 10 10 chr5 5431531 5431551 -197653981 - AluSx SINE Alu -13 299 280 189 0 0 0 chr5 5431551 5431572 -197653960 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 2009 101 10 10 chr5 5431572 5431849 -197653683 - AluSx SINE Alu -31 281 2 2083 186 38 53 chr5 5431849 5432230 -197653302 + MLT1D LTR MaLR 124 497 -8 967 242 54 0 chr5 5432414 5432637 -197652895 + L1MC4 LINE L1 6800 7034 -1008 1146 156 0 0 chr5 5432650 5432823 -197652709 - AluSq SINE Alu -140 173 1 2037 226 66 20 chr5 5432856 5433449 -197652083 + L1MC4 LINE L1 7043 7662 -380 291 227 93 0 chr5 5433495 5433570 -197651962 + L1MB4 LINE L1 5812 5893 -278 1381 149 149 15 chr5 5433570 5433831 -197651701 + AluJb SINE Alu 2 297 -5 2236 104 0 0 chr5 5433833 5434140 -197651392 + AluSx SINE Alu 3 309 -3 1410 160 73 7 chr5 5434149 5434437 -197651095 + L1MB4 LINE L1 5873 6179 -1 1181 167 26 106 chr5 5434479 5434586 -197650946 + L1MC4 LINE L1 7709 7823 -219 808 65 28 0 chr5 5434586 5434693 -197650839 + HY1 scRNA scRNA 2 111 -1 1181 167 26 106 chr5 5434693 5434706 -197650826 + L1MC4 LINE L1 7823 7835 -207 207 114 0 0 chr5 5434706 5434741 -197650791 + (TG)n Simple_repeat Simple_repeat 2 36 0 1181 167 26 106 chr5 5434741 5434757 -197650775 + L1MC4 LINE L1 7835 7851 -191 2278 99 0 0 chr5 5434757 5435060 -197650472 + AluSx SINE Alu 1 303 -9 1181 167 26 106 chr5 5435060 5435269 -197650263 + L1MC4 LINE L1 7851 8028 -14 3161 73 22 44 chr5 5435580 5436034 -197649498 + MLT2A1 LTR ERVL 1 444 0 830 235 105 17 chr5 5436129 5436423 -197649109 + L1ME3 LINE L1 5843 6162 0 1890 195 40 2 chr5 5437081 5437522 -197648010 - MER89 LTR ERV1 0 559 2 519 202 176 8 chr5 5437677 5437796 -197647736 + MER2 DNA MER2_type 206 344 -1 272 161 18 36 chr5 5438769 5438825 -197646707 - MLT1A2 LTR MaLR 0 374 320 1031 139 0 0 chr5 5438840 5438984 -197646548 - MLT1A2 LTR MaLR -227 147 4 1530 158 99 56 chr5 5439199 5439388 -197646144 + MER2 DNA MER2_type 9 219 -126 1739 132 35 17 chr5 5439388 5439676 -197645856 - AluJo SINE Alu -19 293 1 1530 158 99 56 chr5 5439676 5439809 -197645723 + MER2 DNA MER2_type 219 345 0 1898 129 3 7 chr5 5439834 5440121 -197645411 - AluSx SINE Alu -26 286 1 911 192 124 1 chr5 5440363 5440580 -197644952 - MLT1D LTR MaLR -2 503 234 419 127 0 0 chr5 5440580 5440635 -197644897 + AluSg/x SINE Alu 196 250 -62 530 238 56 75 chr5 5440894 5441010 -197644522 + L1MC5 LINE L1 7273 7390 -571 2069 104 0 52 chr5 5441010 5441338 -197644194 + AluSx SINE Alu 1 311 -1 530 238 56 75 chr5 5441338 5441689 -197643843 + L1MC5 LINE L1 7390 7613 -348 1741 170 7 0 chr5 5441806 5442100 -197643432 + AluSx SINE Alu 1 296 -16 926 216 56 173 chr5 5442276 5442617 -197642915 + L2 LINE L2 2709 3041 -272 637 39 0 0 chr5 5442617 5442695 -197642837 + AluY SINE Alu 221 298 -11 926 216 56 173 chr5 5442695 5442940 -197642592 + L2 LINE L2 3041 3313 0 21 0 0 0 chr5 5443427 5443448 -197642084 + AT_rich Low_complexity Low_complexity 1 21 0 211 226 151 0 chr5 5443517 5443570 -197641962 + MIR3 SINE MIR 127 187 -21 22 0 0 0 chr5 5443932 5443954 -197641578 + AT_rich Low_complexity Low_complexity 1 22 0 2016 117 0 0 chr5 5443966 5444323 -197641209 + AluSx SINE Alu 1 357 0 675 286 106 0 chr5 5444813 5445040 -197640492 + MIR SINE MIR 6 256 -6 460 292 99 5 chr5 5445477 5445669 -197639863 + MIR SINE MIR 1 210 -52 30 77 0 0 chr5 5446495 5446560 -197638972 + GC_rich Low_complexity Low_complexity 1 65 0 193 93 0 47 chr5 5446880 5446923 -197638609 + (GGGAGA)n Simple_repeat Simple_repeat 3 43 0 817 165 0 122 chr5 5448133 5448321 -197637211 - FRAM SINE Alu -1 165 1 232 222 11 78 chr5 5448780 5448870 -197636662 - MIR SINE MIR 0 262 179 282 268 65 89 chr5 5448981 5449227 -197636305 - MLT1K LTR MaLR -160 428 189 1464 150 59 28 chr5 5449404 5449567 -197635965 - AluJb SINE Alu -17 295 118 183 42 0 0 chr5 5449567 5449591 -197635941 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1464 150 59 28 chr5 5449591 5449713 -197635819 - AluJb SINE Alu -194 118 1 324 0 0 0 chr5 5449761 5449797 -197635735 + (TG)n Simple_repeat Simple_repeat 2 37 0 2211 99 0 0 chr5 5449976 5450269 -197635263 - AluSg1 SINE Alu -16 293 1 352 115 0 2 chr5 5450220 5450277 -197635255 - Alu SINE Alu -254 49 1 * 744 218 175 26 chr5 5450277 5450580 -197634952 + L1MC4 LINE L1 7689 8037 -5 1988 124 24 13 chr5 5450965 5451263 -197634269 - AluSx SINE Alu -11 301 1 286 355 40 0 chr5 5451606 5451730 -197633802 + L1MEd LINE L1 509 637 -5482 288 0 0 0 chr5 5451786 5451818 -197633714 + (TG)n Simple_repeat Simple_repeat 1 32 0 320 181 64 0 chr5 5451937 5452031 -197633501 + Charlie2 DNA MER1_type 2675 2774 -88 352 305 48 0 chr5 5452162 5452267 -197633265 + L2 LINE L2 3202 3311 -2 260 215 107 50 chr5 5452631 5452752 -197632780 - L1MC4 LINE L1 -5 8037 7910 295 107 57 45 chr5 5452766 5452943 -197632589 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 39 38 0 0 chr5 5452954 5453007 -197632525 + AT_rich Low_complexity Low_complexity 1 53 0 379 93 105 0 chr5 5453007 5453169 -197632363 + (TA)n Simple_repeat Simple_repeat 1 179 0 441 99 34 70 chr5 5453220 5453575 -197631957 + (TA)n Simple_repeat Simple_repeat 1 341 0 204 129 53 53 chr5 5453684 5453855 -197631677 + (TA)n Simple_repeat Simple_repeat 2 172 0 302 236 101 75 chr5 5454018 5454068 -197631464 - L1MC/D LINE L1 -2294 5491 5444 1864 158 3 13 chr5 5454068 5454378 -197631154 - AluJo SINE Alu -4 308 2 302 236 101 75 chr5 5454378 5454402 -197631130 - L1MC/D LINE L1 -2341 5444 5422 571 120 56 9 chr5 5454402 5454510 -197631022 - L1MB3 LINE L1 -4 6179 6067 302 236 101 75 chr5 5454510 5454633 -197630899 - L1MC/D LINE L1 -2363 5422 5288 228 280 220 38 chr5 5455183 5455315 -197630217 + MIR SINE MIR 82 237 -25 2146 99 74 42 chr5 5455315 5455668 -197629864 - THE1B LTR MaLR 0 364 1 705 252 52 0 chr5 5455839 5455994 -197629538 + AluJo SINE Alu 13 175 -137 775 198 99 11 chr5 5456617 5456880 -197628652 - Charlie1b DNA MER1_type -129 394 109 929 178 6 12 chr5 5456891 5457054 -197628478 + FRAM SINE Alu 1 162 -14 2669 155 18 26 chr5 5458952 5459560 -197625972 + pTR5 LTR ERV1 742 1344 -1094 4176 124 15 126 chr5 5459576 5460500 -197625032 + LTR12 LTR ERV1 5 826 0 778 231 61 47 chr5 5462195 5462407 -197623125 - MIR SINE MIR 0 262 48 570 184 56 90 chr5 5463114 5463380 -197622152 - L1MC5 LINE L1 -94 7867 7611 2414 63 0 20 chr5 5463437 5463736 -197621796 - AluY SINE Alu -17 294 2 24 0 0 0 chr5 5463740 5463764 -197621768 + AT_rich Low_complexity Low_complexity 1 24 0 718 186 0 0 chr5 5463764 5463882 -197621650 - FLAM_C SINE Alu -25 118 1 297 0 0 0 chr5 5464132 5464165 -197621367 + (TG)n Simple_repeat Simple_repeat 2 34 0 2209 117 0 3 chr5 5464616 5464915 -197620617 + AluSx SINE Alu 1 298 -14 507 90 0 13 chr5 5465316 5465394 -197620138 - AluS SINE Alu -236 77 1 243 149 0 0 chr5 5465400 5465447 -197620085 - MER2 DNA MER2_type -169 176 130 771 167 92 17 chr5 5465449 5465623 -197619909 + Tigger2 DNA MER2_type 6 192 -2526 265 81 177 0 chr5 5465693 5465755 -197619777 - Tigger2 DNA MER2_type -169 2549 2477 3673 132 82 20 chr5 5465813 5466517 -197619015 - Tigger2 DNA MER2_type -1970 748 1 1091 169 43 0 chr5 5466517 5466724 -197618808 + MER2 DNA MER2_type 130 345 0 767 242 81 40 chr5 5466730 5467069 -197618463 + L2 LINE L2 2709 3080 -233 590 39 13 0 chr5 5467069 5467146 -197618386 + AluY SINE Alu 224 301 -11 1613 134 12 73 chr5 5467640 5467968 -197617564 - MLT1B LTR MaLR -82 308 1 2403 72 3 0 chr5 5468048 5468341 -197617191 - AluSp SINE Alu -19 294 1 750 172 127 31 chr5 5468684 5469128 -197616404 - Charlie1 DNA MER1_type -1 2760 2186 3374 203 89 10 chr5 5469136 5470395 -197615137 + L1MB8 LINE L1 4810 6174 -4 712 184 6 34 chr5 5470393 5470555 -197614977 + L1ME LINE L1 5421 5574 -547 * 325 234 165 19 chr5 5470718 5470797 -197614735 - LTR41 LTR ERVL -592 181 115 180 0 0 0 chr5 5470797 5470817 -197614715 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 325 234 165 19 chr5 5470817 5470895 -197614637 - LTR41 LTR ERVL -658 115 1 2348 99 3 0 chr5 5471079 5471382 -197614150 - AluSq SINE Alu -9 304 1 2198 76 32 0 chr5 5471573 5471871 -197613661 - AluSp SINE Alu 0 307 1 1729 146 84 0 chr5 5472227 5472502 -197613030 - AluSx SINE Alu -14 298 1 248 111 0 0 chr5 5472708 5472744 -197612788 + L1MC3 LINE L1 7238 7273 -512 450 95 0 0 chr5 5472748 5472811 -197612721 - LTR3b LTR ERVK 0 500 438 1828 172 49 51 chr5 5472811 5473241 -197612291 - LTR3 LTR ERVK 0 429 1 1975 158 113 15 chr5 5473241 5473271 -197612261 + L1MC3 LINE L1 7271 7297 -488 189 0 0 0 chr5 5473271 5473292 -197612240 + (ATATG)n Simple_repeat Simple_repeat 2 22 0 1975 158 113 15 chr5 5473292 5473723 -197611809 + L1MC3 LINE L1 7297 7777 -8 824 279 54 56 chr5 5474540 5474630 -197610902 - MLT1I LTR MaLR 0 409 320 1656 139 12 90 chr5 5474630 5474849 -197610683 + AluJo SINE Alu 1 189 -123 1863 135 30 20 chr5 5474849 5475152 -197610380 - AluSx SINE Alu -6 306 1 1656 139 12 90 chr5 5475152 5475255 -197610277 + AluJo SINE Alu 189 298 -14 824 279 54 56 chr5 5475255 5475572 -197609960 - MLT1I LTR MaLR -89 320 3 1867 200 63 41 chr5 5475775 5476315 -197609217 - L1ME1 LINE L1 -8 6158 5607 2277 79 0 33 chr5 5476655 5476958 -197608574 - AluSp SINE Alu -20 293 1 40 21 0 0 chr5 5477243 5477290 -197608242 + AT_rich Low_complexity Low_complexity 1 47 0 1930 140 0 0 chr5 5477966 5478244 -197607288 + AluSg SINE Alu 25 302 -8 1864 164 60 0 chr5 5478395 5478713 -197606819 - MER1B DNA MER1_type 0 337 1 282 377 31 13 chr5 5479493 5479652 -197605880 + MIR3 SINE MIR 42 203 -5 346 333 63 0 chr5 5480057 5480168 -197605364 + L2 LINE L2 3153 3270 -2 2002 126 29 0 chr5 5480262 5480594 -197604938 + AluSx SINE Alu 1 340 0 546 268 83 20 chr5 5483899 5484153 -197601379 + L1MC4 LINE L1 6792 7061 -981 272 255 54 82 chr5 5484623 5485011 -197600521 + L1MC5 LINE L1 7313 7689 -272 375 237 38 23 chr5 5485224 5485355 -197600177 - Charlie7 DNA MER1_type -3 2609 2477 292 310 139 12 chr5 5487451 5487756 -197597776 - L1MC4a LINE L1 -328 5793 5576 2495 183 33 9 chr5 5487803 5488345 -197597187 - MER90 LTR ERV1 -18 596 1 349 350 33 22 chr5 5488355 5488535 -197596997 - L1MC4a LINE L1 -458 7350 7169 1096 243 83 98 chr5 5488544 5489125 -197596407 + MLT1G LTR MaLR 16 587 -3 422 262 6 90 chr5 5489127 5489361 -197596171 - L1MC4 LINE L1 -735 7226 7040 1291 135 18 135 chr5 5489361 5489760 -197595772 - Tigger5 DNA MER2_type -1 2322 11 1927 149 0 7 chr5 5490492 5490793 -197594739 - AluJb SINE Alu -13 299 1 27 0 0 0 chr5 5491115 5491142 -197594390 + AT_rich Low_complexity Low_complexity 1 27 0 1398 171 114 7 chr5 5491144 5491424 -197594108 - AluJo SINE Alu -2 310 1 317 221 143 0 chr5 5491719 5491796 -197593736 + MER2 DNA MER2_type 1 88 -257 275 244 64 13 chr5 5492019 5492097 -197593435 + MER3 DNA MER1_type 1 82 -127 754 182 0 23 chr5 5492867 5492999 -197592533 - FLAM_C SINE Alu -14 129 1 646 180 0 0 chr5 5494226 5494326 -197591206 + FRAM SINE Alu 45 144 -32 917 200 15 15 chr5 5494794 5494999 -197590533 + MER3 DNA MER1_type 1 205 -4 2161 130 37 6 chr5 5494999 5495352 -197590180 + THE1B LTR MaLR 1 364 0 1715 171 10 10 chr5 5496019 5496311 -197589221 + AluJo SINE Alu 1 292 -20 209 311 134 34 chr5 5496566 5496685 -197588847 + L2 LINE L2 3182 3312 -1 * 225 229 115 21 chr5 5496683 5496779 -197588753 - MIR SINE MIR -68 194 90 309 254 83 55 chr5 5496927 5497108 -197588424 + MIR SINE MIR 71 256 -6 645 257 59 10 chr5 5498811 5499013 -197586519 + L2 LINE L2 1765 1976 -1338 1318 277 76 9 chr5 5499021 5499610 -197585922 + L2 LINE L2 2471 3109 -204 856 154 0 0 chr5 5499768 5499891 -197585641 + FLAM_C SINE Alu 1 123 -20 21 0 0 0 chr5 5499891 5499912 -197585620 + AT_rich Low_complexity Low_complexity 1 21 0 1924 173 0 0 chr5 5500050 5500350 -197585182 + AluJb SINE Alu 1 300 -12 2474 67 0 3 chr5 5501149 5501446 -197584086 + AluY SINE Alu 2 297 -14 940 95 0 3 chr5 5502766 5502988 -197582544 + AluSg SINE Alu 1 298 -12 2110 134 3 0 chr5 5503049 5503348 -197582184 + AluSx SINE Alu 1 300 -12 332 301 99 33 chr5 5503632 5503845 -197581687 + L1ME3 LINE L1 942 1168 -4951 308 315 116 8 chr5 5503979 5504246 -197581286 + HAL1 LINE L1 1463 1758 -749 649 239 155 73 chr5 5504486 5504976 -197580556 + L1ME3 LINE L1 4803 5332 -797 397 309 0 0 chr5 5505001 5505111 -197580421 - MER8 DNA MER2_type -127 112 3 2173 239 94 13 chr5 5505113 5505815 -197579717 + L1ME3 LINE L1 5352 6110 -35 23 33 0 0 chr5 5507162 5507192 -197578340 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 5507336 5507357 -197578175 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 5507630 5507651 -197577881 + AT_rich Low_complexity Low_complexity 1 21 0 2403 97 0 0 chr5 5507794 5508103 -197577429 - AluSx SINE Alu -3 309 1 1768 175 34 3 chr5 5508170 5508462 -197577070 - AluSx SINE Alu -11 301 1 1116 216 163 25 chr5 5508951 5509349 -197576183 - MLT1H LTR MaLR 0 549 97 2176 109 7 3 chr5 5509908 5510202 -197575330 - AluSx SINE Alu -17 295 1 1820 174 3 3 chr5 5511626 5511931 -197573601 - AluJo SINE Alu -7 305 1 270 0 0 0 chr5 5511935 5511965 -197573567 + (T)n Simple_repeat Simple_repeat 1 30 0 210 224 0 0 chr5 5512138 5512187 -197573345 + GA-rich Low_complexity Low_complexity 3 51 0 2357 54 7 0 chr5 5512460 5512755 -197572777 - AluY SINE Alu -14 297 1 1955 108 0 0 chr5 5513019 5513269 -197572263 + AluSx SINE Alu 49 298 -14 232 295 214 63 chr5 5513381 5513564 -197571968 - L2 LINE L2 -17 3296 3142 1646 165 7 65 chr5 5513564 5513873 -197571659 - AluJb SINE Alu -21 291 1 232 295 214 63 chr5 5513873 5514021 -197571511 - L2 LINE L2 -171 3142 2915 * 261 303 290 24 chr5 5514017 5514314 -197571218 + L2 LINE L2 2569 2944 -370 27 0 0 0 chr5 5514517 5514544 -197570988 + AT_rich Low_complexity Low_complexity 1 27 0 2481 67 0 0 chr5 5515298 5515597 -197569935 - AluY SINE Alu -12 299 1 23 54 0 0 chr5 5515760 5515797 -197569735 + AT_rich Low_complexity Low_complexity 1 37 0 470 261 154 0 chr5 5516122 5516310 -197569222 - MLT1L LTR MaLR -8 607 391 310 252 55 88 chr5 5516580 5516818 -197568714 - L2 LINE L2 0 3313 3084 316 311 151 50 chr5 5520868 5520954 -197564578 + L1MC/D LINE L1 5439 5515 -2293 1721 88 102 56 chr5 5520954 5521239 -197564293 + AluSg SINE Alu 3 300 -10 316 311 151 50 chr5 5521239 5521390 -197564142 + L1MC/D LINE L1 5515 5700 -2108 484 275 178 51 chr5 5521652 5522264 -197563268 - L2 LINE L2 -2 3311 2625 1370 205 115 18 chr5 5522289 5522742 -197562790 - L1M4 LINE L1 -848 5298 4802 26 64 0 0 chr5 5525364 5525411 -197560121 + AT_rich Low_complexity Low_complexity 1 47 0 216 0 0 0 chr5 5525818 5525842 -197559690 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2176 110 0 25 chr5 5525867 5526185 -197559347 + AluSx SINE Alu 1 310 -2 315 0 0 0 chr5 5526185 5526220 -197559312 + (TA)n Simple_repeat Simple_repeat 2 36 0 24 32 0 0 chr5 5527455 5527486 -197558046 + AT_rich Low_complexity Low_complexity 1 31 0 2089 110 45 0 chr5 5528652 5528942 -197556590 + AluSx SINE Alu 1 303 -9 342 91 0 0 chr5 5530170 5530225 -197555307 + (CA)n Simple_repeat Simple_repeat 1 55 0 2424 88 0 25 chr5 5531240 5531557 -197553975 + AluSc SINE Alu 1 309 0 470 273 123 0 chr5 5531557 5531738 -197553794 + L2 LINE L2 2364 2567 -747 351 299 76 28 chr5 5532030 5532143 -197553389 + MIR3 SINE MIR 25 148 -60 2123 115 0 20 chr5 5532143 5532448 -197553084 + AluSx SINE Alu 1 299 -13 351 299 76 28 chr5 5532448 5532478 -197553054 + MIR3 SINE MIR 148 175 -33 266 358 75 11 chr5 5532737 5532924 -197552608 + MIR SINE MIR 24 222 -40 2262 108 0 13 chr5 5533203 5533518 -197552014 + AluSx SINE Alu 2 312 0 1295 194 24 8 chr5 5533766 5534018 -197551514 - AluJo SINE Alu -18 294 39 208 375 79 29 chr5 5534471 5534887 -197550645 - L2 LINE L2 -558 2756 2320 11366 107 31 42 chr5 5637191 5637504 -197448028 + Tigger1 DNA MER2_type 658 973 -1445 2295 92 24 0 chr5 5637504 5637799 -197447733 - AluSg SINE Alu -8 302 1 11366 107 31 42 chr5 5637799 5639265 -197446267 + Tigger1 DNA MER2_type 973 2418 0 955 189 124 57 chr5 5639632 5639980 -197445552 + MLT1D LTR MaLR 1 442 -63 2333 94 3 3 chr5 5639980 5640288 -197445244 - AluSp SINE Alu -5 308 1 955 189 124 57 chr5 5640288 5640355 -197445177 + MLT1D LTR MaLR 442 503 -2 586 244 142 20 chr5 5640364 5640561 -197444971 - MIR SINE MIR -39 223 3 2487 58 0 26 chr5 5640744 5641057 -197444475 - AluY SINE Alu -6 305 1 28 0 0 0 chr5 5642690 5642718 -197442814 + AT_rich Low_complexity Low_complexity 1 28 0 1049 209 39 9 chr5 5642725 5642955 -197442577 - L1MB3 LINE L1 -7 6176 5940 2373 92 0 0 chr5 5642957 5643251 -197442281 + AluSg SINE Alu 1 294 -16 2379 105 52 47 chr5 5643251 5643613 -197441919 - THE1B LTR MaLR 0 364 1 2124 136 0 0 chr5 5646660 5646955 -197438577 - AluSx SINE Alu -17 295 1 181 346 72 27 chr5 5648095 5648358 -197437174 + L2 LINE L2 2688 2962 -352 228 215 93 37 chr5 5648572 5648679 -197436853 + L2 LINE L2 3201 3313 0 1805 166 3 7 chr5 5648778 5649080 -197436452 - AluJo SINE Alu -11 301 1 230 158 0 0 chr5 5649844 5649882 -197435650 - tRNA-Leu-TTG tRNA tRNA -46 40 3 2932 257 98 22 chr5 5650958 5652069 -197433463 + L1MC4 LINE L1 6771 7966 -76 1117 180 234 0 chr5 5652071 5652310 -197433222 + AluJb SINE Alu 1 295 -17 456 154 13 0 chr5 5652316 5652394 -197433138 + L1MC4 LINE L1 7960 8038 -4 442 196 112 28 chr5 5652713 5652856 -197432676 - MER104 DNA Tc2 0 180 26 920 96 0 8 chr5 5652856 5652981 -197432551 + FLAM_C SINE Alu 1 124 -19 202 225 0 0 chr5 5654099 5654139 -197431393 + (TATATG)n Simple_repeat Simple_repeat 5 44 0 186 345 44 35 chr5 5654139 5654252 -197431280 + MIR SINE MIR 41 154 -108 453 253 153 0 chr5 5654713 5654883 -197430649 - L2 LINE L2 0 3313 3118 1869 128 176 10 chr5 5655233 5655545 -197429987 + THE1B LTR MaLR 1 364 0 12043 77 12 3 chr5 5655545 5657097 -197428435 + THE1B-int LTR MaLR 15 1580 0 2410 92 63 20 chr5 5657097 5657446 -197428086 + THE1B LTR MaLR 1 364 0 354 312 88 12 chr5 5657679 5657849 -197427683 + L3 LINE CR1 626 808 -769 1136 252 74 24 chr5 5658741 5659162 -197426370 + MLT1L LTR MaLR 166 607 -8 249 299 13 0 chr5 5660056 5660133 -197425399 + L3 LINE CR1 1147 1224 -353 626 255 66 14 chr5 5660413 5660625 -197424907 + L3 LINE CR1 1283 1505 -72 221 167 50 0 chr5 5662417 5662477 -197423055 + (TTATA)n Simple_repeat Simple_repeat 5 67 0 2280 110 0 7 chr5 5662478 5662788 -197422744 - AluSx SINE Alu -4 308 1 721 138 0 18 chr5 5662791 5662900 -197422632 - MLT1B LTR MaLR -282 108 2 2392 99 0 0 chr5 5663797 5664109 -197421423 + AluSx SINE Alu 1 312 0 22 0 0 0 chr5 5664205 5664227 -197421305 + AT_rich Low_complexity Low_complexity 1 22 0 807 335 109 65 chr5 5665032 5665163 -197420369 - L3 LINE CR1 -76 1501 1377 1787 136 24 21 chr5 5665163 5665450 -197420082 - AluJb SINE Alu -3 309 22 807 335 109 65 chr5 5665450 5666226 -197419306 - L3 LINE CR1 -200 1377 544 1538 147 45 54 chr5 5666226 5666539 -197418993 - AluJb SINE Alu 0 312 3 807 335 109 65 chr5 5666539 5666616 -197418916 - L3 LINE CR1 -1033 544 472 2022 143 0 0 chr5 5667036 5667330 -197418202 - AluSx SINE Alu -18 294 1 2105 214 85 105 chr5 5668224 5668438 -197417094 - L1ME1 LINE L1 -8 6158 5941 480 101 0 0 chr5 5668438 5668507 -197417025 - Alu SINE Alu -1 309 241 2105 214 85 105 chr5 5668507 5669035 -197416497 - L1ME1 LINE L1 -225 5941 5364 2084 138 38 30 chr5 5669035 5669404 -197416128 - THE1C LTR MaLR 0 375 4 1217 213 20 16 chr5 5669452 5669783 -197415749 - L1MC/D LINE L1 -746 5400 5242 2170 102 0 39 chr5 5669783 5670088 -197415444 - AluSx SINE Alu -19 293 1 1217 213 20 16 chr5 5670088 5670134 -197415398 - L1MC/D LINE L1 -904 5242 5198 770 153 0 96 chr5 5670136 5670293 -197415239 - FLAM_C SINE Alu 0 143 2 5331 221 37 50 chr5 5670294 5671239 -197414293 - L1MC/D LINE L1 -937 5209 4296 1483 131 5 5 chr5 5671239 5671453 -197414079 - AluSg/x SINE Alu -13 299 86 5331 221 37 50 chr5 5671453 5672221 -197413311 - L1MC/D LINE L1 -1850 4296 3519 278 248 9 0 chr5 5672383 5672492 -197413040 + GA-rich Low_complexity Low_complexity 1 110 0 891 313 50 37 chr5 5672544 5673200 -197412332 + HAL1b LINE L1 145 809 -539 2140 83 79 0 chr5 5673622 5673912 -197411620 - AluSp SINE Alu 0 313 1 1300 208 21 4 chr5 5674980 5675251 -197410281 + AluJo SINE Alu 39 313 0 1099 217 156 44 chr5 5675555 5675793 -197409739 - L1 LINE L1 -1593 4553 4343 1582 194 14 17 chr5 5675793 5676087 -197409445 - AluJb SINE Alu -14 298 6 1099 217 156 44 chr5 5676087 5676258 -197409274 - L1 LINE L1 -1803 4343 4098 1605 230 25 42 chr5 5676262 5676736 -197408796 - L1 LINE L1 -2155 3991 3526 206 279 0 0 chr5 5677013 5677056 -197408476 - L2 LINE L2 -3 3310 3268 21 0 0 0 chr5 5677409 5677430 -197408102 + AT_rich Low_complexity Low_complexity 1 21 0 234 301 154 0 chr5 5678964 5679087 -197406445 - MIR3 SINE MIR -25 183 42 1052 233 165 16 chr5 5679255 5679869 -197405663 + LTR50 LTR ERVL 1 793 -2 1656 149 76 41 chr5 5681344 5681685 -197403847 - THE1C LTR MaLR -33 342 1 1768 120 19 0 chr5 5681757 5682016 -197403516 - AluSg1 SINE Alu -5 304 41 804 262 151 70 chr5 5682326 5682696 -197402836 + MLT1I LTR MaLR 2 401 -8 2123 126 7 0 chr5 5683047 5683349 -197402183 - AluSx SINE Alu -2 310 7 2301 198 35 71 chr5 5683564 5684139 -197401393 - MLT2B3 LTR ERVL 0 554 1 1728 159 77 30 chr5 5684736 5685100 -197400432 + MLT1B LTR MaLR 8 388 -2 1360 263 43 17 chr5 5685288 5685638 -197399894 + MLT1I LTR MaLR 48 406 -3 360 0 0 0 chr5 5686368 5686408 -197399124 + (TG)n Simple_repeat Simple_repeat 1 40 0 1795 169 36 109 chr5 5686915 5687327 -197398205 - MLT1C LTR MaLR 0 467 96 1985 121 33 16 chr5 5687327 5687633 -197397899 - AluSx SINE Alu 0 312 2 1795 169 36 109 chr5 5687633 5687717 -197397815 - MLT1C LTR MaLR -371 96 7 241 203 0 87 chr5 5687994 5688063 -197397469 - MLT1K LTR MaLR -34 554 492 23 54 0 0 chr5 5688252 5688289 -197397243 + AT_rich Low_complexity Low_complexity 1 37 0 443 328 63 25 chr5 5689218 5689427 -197396105 - L1MC4a LINE L1 -1882 5926 5702 2030 116 34 3 chr5 5689427 5689719 -197395813 - AluSx SINE Alu -11 301 1 443 328 63 25 chr5 5689719 5689793 -197395739 - L1MC4a LINE L1 -2106 5702 5632 1217 75 6 13 chr5 5689962 5690121 -197395411 - AluY SINE Alu -153 158 1 21 0 0 56 chr5 5690620 5690638 -197394894 + AT_rich Low_complexity Low_complexity 1 18 -16 1486 41 0 0 chr5 5690638 5690809 -197394723 - AluY SINE Alu -18 293 123 21 0 0 56 chr5 5690809 5690826 -197394706 + AT_rich Low_complexity Low_complexity 18 34 0 1494 178 69 7 chr5 5691219 5691495 -197394037 - AluJo SINE Alu -19 293 1 417 310 158 10 chr5 5691855 5692058 -197393474 - MIR SINE MIR -1 261 29 1897 136 51 0 chr5 5692066 5692361 -197393171 - AluSg SINE Alu 0 310 1 845 194 58 51 chr5 5692383 5692829 -197392703 + MER39 LTR ERV1 1 550 -157 2636 119 8 99 chr5 5692829 5693326 -197392206 - LTR12 LTR ERV1 -236 478 27 707 185 57 13 chr5 5693351 5693519 -197392013 + MER39 LTR ERV1 364 707 0 5769 136 23 24 chr5 5693909 5695054 -197390478 - L1PA16 LINE L1 -9 6157 5013 1975 166 0 0 chr5 5695054 5695355 -197390177 - AluJb SINE Alu -11 301 1 5769 136 23 24 chr5 5695355 5695371 -197390161 - L1PA16 LINE L1 -1153 5013 4998 2051 127 3 0 chr5 5695371 5695680 -197389852 - AluSx SINE Alu 0 310 1 5769 136 23 24 chr5 5695680 5695808 -197389724 - L1PA16 LINE L1 -1168 4998 4873 1703 120 12 0 chr5 5695906 5696148 -197389384 + AluSq SINE Alu 10 254 -59 2480 78 10 0 chr5 5696248 5696555 -197388977 + AluSq SINE Alu 4 313 0 394 306 91 30 chr5 5696756 5697021 -197388511 - L1MDa LINE L1 -3925 2615 2335 22677 82 13 4 chr5 5697035 5700979 -197384553 - L1PA7 LINE L1 -6 6148 2170 385 178 68 0 chr5 5702080 5702153 -197383379 - MIR SINE MIR -106 156 79 30 45 0 0 chr5 5702882 5702926 -197382606 + AT_rich Low_complexity Low_complexity 1 44 0 981 184 6 0 chr5 5703611 5703774 -197381758 + MLT1A1 LTR MaLR 202 365 0 754 195 83 6 chr5 5705069 5705238 -197380294 - LTR40a LTR ERVL -314 205 24 252 276 233 0 chr5 5705258 5705374 -197380158 + HAL1 LINE L1 1504 1646 -861 1961 114 60 4 chr5 5705416 5705697 -197379835 + AluSx SINE Alu 1 297 -15 866 290 136 45 chr5 5707133 5707867 -197377665 + HAL1 LINE L1 4 804 -1703 2388 86 0 0 chr5 5708136 5708427 -197377105 + AluSg SINE Alu 2 292 -18 1161 122 87 0 chr5 5708547 5708743 -197376789 + L1MA1 LINE L1 6090 6302 0 317 254 66 8 chr5 5708911 5709033 -197376499 + HAL1 LINE L1 2030 2158 -349 611 200 38 79 chr5 5709138 5709378 -197376154 + HAL1 LINE L1 2191 2420 -87 8600 120 17 71 chr5 5709595 5711933 -197373599 + L1P3 LINE L1 12 2097 -4049 1446 180 170 41 chr5 5712835 5713247 -197372285 + MLT1C LTR MaLR 1 465 -2 2061 134 33 25 chr5 5713254 5713613 -197371919 - MLT1A1 LTR MaLR 0 365 4 216 206 14 68 chr5 5715352 5715425 -197370107 - L2 LINE L2 -2 3311 3243 564 289 97 30 chr5 5715444 5715742 -197369790 - MLT1J1 LTR MaLR -4 442 125 294 253 51 0 chr5 5716150 5716229 -197369303 - MIR SINE MIR -75 187 105 3607 65 0 7 chr5 5716248 5716712 -197368820 + L1PA13 LINE L1 5703 6163 0 1535 205 10 7 chr5 5716722 5717015 -197368517 + AluJb SINE Alu 4 297 -15 1031 184 0 17 chr5 5717187 5717366 -197368166 - AluJo SINE Alu -132 180 5 2416 93 0 0 chr5 5717382 5717682 -197367850 - AluSc SINE Alu -7 302 3 238 230 92 11 chr5 5717699 5717786 -197367746 - MLT1J1 LTR MaLR -8 438 345 229 220 20 0 chr5 5719902 5719952 -197365580 + L2 LINE L2 3222 3272 0 4275 122 9 8 chr5 5720113 5720747 -197364785 - MER41B LTR ERV1 0 635 1 1717 71 4 0 chr5 5721245 5721471 -197364061 - L1PA8 LINE L1 -2 6170 5944 458 274 87 46 chr5 5721666 5722220 -197363312 + MER20B DNA MER1_type 16 702 -81 1915 196 48 5 chr5 5722224 5722602 -197362930 + MSTD LTR MaLR 1 394 -2 6908 228 47 38 chr5 5722606 5724325 -197361207 + MSTD-int LTR MaLR 2 1735 0 670 111 46 9 chr5 5724325 5724433 -197361099 + MSTD LTR MaLR 1 112 -284 340 167 97 0 chr5 5724430 5724502 -197361030 + MSTD LTR MaLR 314 392 -4 * 3736 156 21 25 chr5 5724539 5725219 -197360313 - L1MB2 LINE L1 -43 6128 5452 450 146 29 19 chr5 5725224 5725327 -197360205 + MER20B DNA MER1_type 680 783 0 25 31 0 0 chr5 5726924 5726956 -197358576 + AT_rich Low_complexity Low_complexity 1 32 0 390 221 21 0 chr5 5727147 5727242 -197358290 - MIR SINE MIR -109 153 57 2316 86 0 32 chr5 5727325 5727638 -197357894 - AluSc SINE Alu -3 306 4 251 338 53 7 chr5 5727862 5728013 -197357519 + MIR SINE MIR 94 251 -11 1430 176 17 76 chr5 5728371 5728695 -197356837 + AluJo SINE Alu 2 307 0 23 33 0 0 chr5 5729176 5729206 -197356326 + AT_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr5 5729441 5729462 -197356070 + AT_rich Low_complexity Low_complexity 1 21 0 1726 168 20 23 chr5 5729462 5729766 -197355766 - AluJb SINE Alu -9 303 1 1262 102 0 5 chr5 5732813 5732999 -197352533 + L1PA13 LINE L1 5979 6163 0 26 50 0 0 chr5 5733226 5733266 -197352266 + AT_rich Low_complexity Low_complexity 1 40 0 1629 157 42 17 chr5 5733268 5733555 -197351977 + AluJo SINE Alu 1 294 -18 609 172 25 0 chr5 5733581 5733703 -197351829 + L1MC1 LINE L1 6208 6332 -1 513 158 53 75 chr5 5734580 5734713 -197350819 + MER91B DNA MER1_type 1 130 -60 196 125 75 0 chr5 5734914 5734954 -197350578 - L2 LINE L2 -2 3270 3228 451 225 230 16 chr5 5735058 5735249 -197350283 + MLT1J2 LTR MaLR 75 306 -144 430 323 65 40 chr5 5735421 5735622 -197349910 + MIR SINE MIR 47 252 -10 326 313 148 28 chr5 5735663 5735839 -197349693 + MIR SINE MIR 49 245 -17 1555 171 123 50 chr5 5735882 5736187 -197349345 - MSTC LTR MaLR -1 427 85 692 46 0 0 chr5 5736187 5736274 -197349258 - L1PA4 LINE L1 -3 6152 6066 1555 171 123 50 chr5 5736274 5736366 -197349166 - MSTC LTR MaLR -343 85 1 1331 218 85 37 chr5 5736366 5736773 -197348759 + MLT1C LTR MaLR 30 464 -3 239 138 0 138 chr5 5736959 5737017 -197348515 - MER58 DNA MER1_type -84 257 208 559 226 44 0 chr5 5737088 5737225 -197348307 + MER5C DNA MER1_type 17 159 -165 1345 113 28 0 chr5 5737248 5737461 -197348071 - L1MA4 LINE L1 -18 6282 6064 256 23 0 47 chr5 5737508 5737551 -197347981 + (TA)n Simple_repeat Simple_repeat 2 42 0 183 269 106 67 chr5 5738208 5738312 -197347220 - MIR3 SINE MIR -10 198 91 438 243 99 7 chr5 5738964 5739017 -197346515 + MER5B DNA MER1_type 6 53 -125 627 171 97 17 chr5 5739017 5739192 -197346340 + MER5A DNA MER1_type 1 189 0 438 243 99 7 chr5 5739192 5739290 -197346242 + MER5B DNA MER1_type 53 171 -7 37 0 0 0 chr5 5739553 5739590 -197345942 + AT_rich Low_complexity Low_complexity 1 37 0 1639 104 36 0 chr5 5739590 5739810 -197345722 - AluSx SINE Alu -84 228 1 4576 109 14 33 chr5 5740000 5740167 -197345365 - LTR8 LTR ERV1 0 691 522 2377 82 3 10 chr5 5740167 5740473 -197345059 - AluSp SINE Alu -9 304 1 4576 109 14 33 chr5 5740473 5741009 -197344523 - LTR8 LTR ERV1 -169 522 1 594 183 26 9 chr5 5741010 5741125 -197344407 - LTR8A LTR ERV1 -610 117 1 2274 105 0 3 chr5 5741322 5741635 -197343897 + AluSx SINE Alu 1 312 0 223 172 266 0 chr5 5742183 5742247 -197343285 + L2 LINE L2 3231 3311 -2 186 253 22 88 chr5 5742748 5742839 -197342693 - MER5B DNA MER1_type -69 109 25 593 236 21 64 chr5 5743134 5743367 -197342165 + L1MC5 LINE L1 7061 7283 -678 485 188 75 30 chr5 5743462 5743595 -197341937 + L1MC5 LINE L1 7299 7437 -524 362 288 196 7 chr5 5743604 5743757 -197341775 + MER5A DNA MER1_type 8 189 0 379 230 152 22 chr5 5743775 5744145 -197341387 + L1MC5 LINE L1 7452 7901 -60 259 101 13 51 chr5 5744424 5744503 -197341029 + (TA)n Simple_repeat Simple_repeat 2 77 0 2796 86 23 13 chr5 5744503 5744900 -197340632 - MLT2A1 LTR ERVL -43 401 1 2778 125 34 26 chr5 5744900 5745012 -197340520 - L1MA4A LINE L1 -255 6048 5562 1904 163 35 35 chr5 5745012 5745387 -197340145 - THE1C LTR MaLR 0 375 1 1967 189 15 94 chr5 5745387 5746257 -197339275 - L1PA2 LINE L1 -226 5929 5186 393 205 158 0 chr5 5746257 5746384 -197339148 + MER5C DNA MER1_type 174 320 -4 212 200 0 0 chr5 5746913 5746953 -197338579 + L2 LINE L2 3264 3303 -10 1412 202 82 12 chr5 5747292 5747633 -197337899 - MLT1A1 LTR MaLR 0 365 1 548 29 14 0 chr5 5747745 5747815 -197337717 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 744 141 0 16 chr5 5747815 5747936 -197337596 - FLAM_C SINE Alu -23 120 2 2594 51 0 10 chr5 5749279 5749592 -197335940 - AluY SINE Alu -1 310 1 235 302 52 17 chr5 5750199 5750371 -197335161 + L1MC4a LINE L1 2305 2482 -3664 1532 234 122 22 chr5 5750433 5750885 -197334647 + MLT1D LTR MaLR 1 497 -8 1367 320 52 24 chr5 5750975 5752253 -197333279 + L1MC4a LINE L1 2676 3988 -2158 21 36 0 0 chr5 5752265 5752293 -197333239 + AT_rich Low_complexity Low_complexity 1 28 0 323 289 54 43 chr5 5752451 5752728 -197332804 + L1MC4a LINE L1 4161 4440 -1706 2522 62 0 28 chr5 5752802 5753122 -197332410 - AluY SINE Alu 0 311 1 536 260 75 78 chr5 5753128 5753513 -197332019 + MLT1J LTR MaLR 36 419 -92 5256 156 14 6 chr5 5753650 5754547 -197330985 + L1MC1 LINE L1 5429 6333 0 395 322 26 26 chr5 5754565 5754795 -197330737 + L1MC4a LINE L1 4456 4685 -1461 2920 123 9 60 chr5 5755392 5755927 -197329605 - L1PB1 LINE L1 -10 6141 5634 2172 101 6 19 chr5 5755952 5756268 -197329264 - AluSp SINE Alu -1 312 1 280 224 0 0 chr5 5756269 5756327 -197329205 + LTR16B LTR ERVL 407 464 0 243 254 99 28 chr5 5756331 5756473 -197329059 + L1MC4a LINE L1 4903 5054 -1092 1163 219 120 69 chr5 5756506 5756972 -197328560 - MLT1D LTR MaLR -4 501 12 598 258 45 25 chr5 5756994 5757358 -197328174 + L1MC4a LINE L1 5107 5481 -743 2366 99 0 6 chr5 5757434 5757746 -197327786 + AluSg SINE Alu 1 310 0 293 319 89 27 chr5 5757760 5758017 -197327515 + L1MC4a LINE L1 5658 5930 -1878 1850 155 58 0 chr5 5758102 5758393 -197327139 - AluJb SINE Alu -4 308 1 3379 51 10 0 chr5 5758403 5758818 -197326714 - L1PA5 LINE L1 -2 6152 5734 668 110 66 37 chr5 5758949 5759085 -197326447 - L1MA4A LINE L1 0 6303 6164 1496 216 35 37 chr5 5759535 5759910 -197325622 - MLT1A2 LTR MaLR 0 374 1 1154 237 106 32 chr5 5761175 5761610 -197323922 + MLT1C LTR MaLR 1 467 0 693 175 9 0 chr5 5761806 5761920 -197323612 - FLAM_C SINE Alu -17 116 2 395 191 0 0 chr5 5761922 5761990 -197323542 - AluJ/FLAM SINE Alu -233 69 2 410 159 0 0 chr5 5761992 5762061 -197323471 - AluJ/FLAM SINE Alu -243 69 1 195 280 262 0 chr5 5762065 5762172 -197323360 + L2 LINE L2 2926 3060 -253 1932 181 38 53 chr5 5762374 5762671 -197322861 - MLT1C LTR MaLR 0 467 178 2225 100 3 0 chr5 5762671 5762962 -197322570 - AluSx SINE Alu -20 292 1 1932 181 38 53 chr5 5762962 5763133 -197322399 - MLT1C LTR MaLR -289 178 6 2216 113 0 10 chr5 5764725 5765034 -197320498 - AluSx SINE Alu -6 306 1 1697 204 264 13 chr5 5765118 5765819 -197319713 - Charlie7 DNA MER1_type -231 2381 1505 2132 113 40 64 chr5 5765840 5766049 -197319483 - THE1B LTR MaLR 0 364 166 2120 99 3 35 chr5 5766049 5766362 -197319170 + AluSq SINE Alu 1 303 -10 2132 113 40 64 chr5 5766362 5766525 -197319007 - THE1B LTR MaLR -198 166 1 192 209 110 0 chr5 5766754 5766845 -197318687 + MIR SINE MIR 82 146 -62 2360 157 49 2 chr5 5767948 5768357 -197317175 - MSTA LTR MaLR 0 428 1 1570 256 132 25 chr5 5768486 5769010 -197316522 + MLT1G1 LTR MaLR 4 583 -12 2177 94 4 0 chr5 5769018 5769294 -197316238 + AluSp SINE Alu 1 277 -36 222 37 0 0 chr5 5769300 5769327 -197316205 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 1067 257 107 17 chr5 5770097 5770443 -197315089 + MLT1E2 LTR MaLR 1 377 -249 194 354 0 23 chr5 5770461 5770591 -197314941 + MIR SINE MIR 86 212 -50 208 206 0 0 chr5 5771215 5771249 -197314283 + polypyrimidine Low_complexity Low_complexity 3 36 0 504 329 36 32 chr5 5771270 5771519 -197314013 - HAL1 LINE L1 -9 2498 2249 181 81 27 27 chr5 5771651 5771688 -197313844 + (TC)n Simple_repeat Simple_repeat 2 38 0 359 280 19 9 chr5 5772056 5772163 -197313369 - HAL1 LINE L1 -741 1766 1659 355 130 29 14 chr5 5772172 5772241 -197313291 - MLT1E2 LTR MaLR 0 624 555 1546 113 38 25 chr5 5772266 5772506 -197313026 - L1PB4 LINE L1 -2 6154 5912 455 257 11 73 chr5 5772535 5772714 -197312818 - MLT1E2 LTR MaLR -226 400 233 386 205 77 51 chr5 5772754 5772871 -197312661 - MLT1E2 LTR MaLR -506 120 1 1815 149 0 58 chr5 5772877 5773186 -197312346 - AluSx SINE Alu -21 291 1 279 305 90 6 chr5 5773405 5773572 -197311960 - LTR16C LTR ERVL -32 459 279 470 267 107 40 chr5 5774114 5774328 -197311204 - LTR33 LTR ERVL -306 215 1 331 280 106 21 chr5 5774618 5774807 -197310725 - HERVL LTR ERVL -452 5312 5108 1819 158 59 24 chr5 5774960 5775301 -197310231 + MLT1A1 LTR MaLR 1 353 -12 282 375 15 0 chr5 5775551 5775687 -197309845 - HERVL LTR ERVL -2627 3027 2890 2128 269 60 49 chr5 5775780 5776699 -197308833 + L1MC4 LINE L1 7113 8041 -1 1372 196 28 89 chr5 5777061 5777454 -197308078 - MLT1B LTR MaLR -2 388 20 1162 211 61 94 chr5 5778949 5779427 -197306105 + MLT1C LTR MaLR 6 467 0 3004 191 50 5 chr5 5780763 5781214 -197304318 - L1MB5 LINE L1 -21 6153 5667 273 119 0 0 chr5 5781214 5781256 -197304276 + (TA)n Simple_repeat Simple_repeat 2 43 0 3004 191 50 5 chr5 5781256 5781405 -197304127 - L1MB5 LINE L1 -507 5667 5526 247 286 0 0 chr5 5782691 5782761 -197302771 + L2 LINE L2 3203 3272 0 189 269 0 19 chr5 5782942 5782994 -197302538 + MIR3 SINE MIR 8 58 -150 432 100 43 164 chr5 5783562 5783629 -197301903 + HAL1 LINE L1 1530 1573 -934 2343 95 0 7 chr5 5783629 5783934 -197301598 + AluSg SINE Alu 1 303 -7 432 100 43 164 chr5 5783934 5784006 -197301526 + HAL1 LINE L1 1573 1652 -855 358 311 33 7 chr5 5784455 5784606 -197300926 - L1M4 LINE L1 -2964 3182 3028 2406 122 55 18 chr5 5784896 5785330 -197300202 - LTR7 LTR ERV1 0 450 1 195 146 0 0 chr5 5785403 5785444 -197300088 + (TATG)n Simple_repeat Simple_repeat 2 42 0 1495 322 0 63 chr5 5786072 5786403 -197299129 + AluSx SINE Alu 1 312 0 1559 173 8 4 chr5 5786405 5786660 -197298872 + AluJb SINE Alu 35 290 -22 541 269 102 19 chr5 5786876 5787199 -197298333 - HAL1b LINE L1 -478 870 521 2403 92 0 0 chr5 5787320 5787624 -197297908 + AluY SINE Alu 1 304 -7 311 290 51 54 chr5 5787648 5787924 -197297608 - HAL1b LINE L1 -1036 312 38 180 0 0 0 chr5 5788905 5788925 -197296607 + (TA)n Simple_repeat Simple_repeat 2 21 0 306 298 102 15 chr5 5789438 5789643 -197295889 - L1M4 LINE L1 -2236 3910 3688 373 278 81 45 chr5 5789867 5790090 -197295442 + MIR SINE MIR 29 259 -3 19556 89 14 1 chr5 5790124 5793623 -197291909 - L1PA7 LINE L1 -5 6464 2921 4495 114 48 0 chr5 5793631 5794278 -197291254 - L1PA7 LINE L1 -5774 687 10 677 295 82 63 chr5 5794320 5794808 -197290724 - L1M4 LINE L1 -2685 3461 2954 824 224 50 36 chr5 5794808 5795027 -197290505 + MER58A DNA MER1_type 2 223 -1 677 295 82 63 chr5 5795027 5795247 -197290285 - L1M4 LINE L1 -3192 2954 2740 830 254 89 44 chr5 5795558 5795896 -197289636 + MLT1H LTR MaLR 190 542 -7 897 256 107 8 chr5 5796082 5796344 -197289188 + MLT1G1 LTR MaLR 1 288 -307 550 329 57 57 chr5 5796356 5796778 -197288754 + L2 LINE L2 2892 3313 0 415 256 64 60 chr5 5796866 5797100 -197288432 - HAL1b LINE L1 -778 570 336 1692 201 13 87 chr5 5797140 5797612 -197287920 - MLT1D LTR MaLR -8 497 61 366 250 62 8 chr5 5798119 5798188 -197287344 - HAL1 LINE L1 -84 2423 2359 3196 188 18 38 chr5 5798188 5798463 -197287069 + MLT1E1 LTR MaLR 3 282 -372 2275 117 0 0 chr5 5798463 5798761 -197286771 + AluSx SINE Alu 6 303 -9 3196 188 18 38 chr5 5798761 5799150 -197286382 + MLT1E1 LTR MaLR 282 654 0 366 250 62 8 chr5 5799150 5799208 -197286324 - HAL1 LINE L1 -148 2359 2289 604 296 139 18 chr5 5799792 5800066 -197285466 - MLT1I LTR MaLR -28 381 75 325 349 95 11 chr5 5800192 5800456 -197285076 + L1MC/D LINE L1 5295 5580 -2228 297 258 43 0 chr5 5800616 5800709 -197284823 + L2 LINE L2 3169 3265 -7 317 158 11 32 chr5 5801476 5801571 -197283961 + (TA)n Simple_repeat Simple_repeat 1 93 0 208 189 38 38 chr5 5801578 5801631 -197283901 + MER5A DNA MER1_type 137 189 0 247 258 0 21 chr5 5803085 5803178 -197282354 - L1MC4 LINE L1 -1338 6704 6614 687 233 223 40 chr5 5803323 5803696 -197281836 - MLT1H LTR MaLR -107 442 2 291 293 40 0 chr5 5803696 5803795 -197281737 - MIR SINE MIR -63 145 43 2327 147 24 31 chr5 5805630 5806045 -197279487 + MLT2D LTR ERVL 3 414 0 486 286 49 35 chr5 5806054 5806257 -197279275 - MIR SINE MIR -41 221 16 245 252 86 28 chr5 5807089 5807226 -197278306 + LTR33A LTR ERVL 403 520 -3 446 156 0 92 chr5 5807512 5807621 -197277911 - L1PA11 LINE L1 0 6174 6076 2319 16 0 0 chr5 5807626 5807881 -197277651 + L1P1 LINE L1 5469 5723 -432 2032 119 9 35 chr5 5808244 5808563 -197276969 - AluJo SINE Alu -1 311 1 269 300 46 31 chr5 5808567 5808697 -197276835 - MIR SINE MIR -60 148 17 31 0 0 0 chr5 5808933 5808964 -197276568 + AT_rich Low_complexity Low_complexity 1 31 0 670 240 91 13 chr5 5809710 5809864 -197275668 + MER20 DNA MER1_type 53 218 -1 297 333 57 12 chr5 5811053 5811299 -197274233 - L2 LINE L2 -1244 2070 1814 240 35 0 0 chr5 5812297 5812326 -197273206 + (TAAA)n Simple_repeat Simple_repeat 4 32 0 317 239 188 0 chr5 5813356 5813473 -197272059 + MLT1J2 LTR MaLR 67 205 -245 1843 187 52 9 chr5 5815066 5815414 -197270118 + MLT1A1 LTR MaLR 1 363 -2 404 289 36 36 chr5 5815777 5815943 -197269589 - MIR SINE MIR -32 230 65 647 258 45 10 chr5 5816430 5816628 -197268904 + MIR SINE MIR 1 205 -57 2902 138 39 55 chr5 5818065 5818124 -197267408 + L1MA9 LINE L1 5726 5784 -528 2125 123 0 0 chr5 5818124 5818417 -197267115 + AluSx SINE Alu 1 293 -19 2902 138 39 55 chr5 5818417 5818797 -197266735 + L1MA9 LINE L1 5784 6155 -157 180 97 0 0 chr5 5818797 5818828 -197266704 + (CA)n Simple_repeat Simple_repeat 1 31 0 2902 138 39 55 chr5 5818828 5818983 -197266549 + L1MA9 LINE L1 6155 6311 -1 2453 47 14 10 chr5 5819429 5819725 -197265807 - AluY SINE Alu -14 297 1 256 279 93 0 chr5 5820086 5820172 -197265360 - MER5A DNA MER1_type -29 160 67 184 111 0 0 chr5 5820253 5820280 -197265252 - MER5A DNA MER1_type -161 28 2 5492 107 102 78 chr5 5820683 5822233 -197263299 - pTR5 LTR ERV1 0 2438 743 2203 191 42 2 chr5 5822320 5822744 -197262788 - MLT1C LTR MaLR -26 441 1 960 135 0 0 chr5 5823997 5824130 -197261402 - AluJb SINE Alu -179 133 1 2807 176 20 20 chr5 5824450 5825008 -197260524 - MER89 LTR ERV1 -1 558 1 2335 95 0 0 chr5 5825147 5825443 -197260089 - AluSg SINE Alu -14 296 1 1312 155 28 53 chr5 5825507 5825959 -197259573 - THE1C LTR MaLR 0 375 2 246 58 0 58 chr5 5825959 5826011 -197259521 + (TA)n Simple_repeat Simple_repeat 2 50 0 2459 60 0 3 chr5 5828342 5828640 -197256892 + AluY SINE Alu 1 297 -14 237 237 0 17 chr5 5828910 5828969 -197256563 - L1ME LINE L1 -521 5583 5526 333 251 64 29 chr5 5829004 5829163 -197256369 - L1ME LINE L1 -682 5422 5296 325 280 140 51 chr5 5829668 5830061 -197255471 - L2 LINE L2 -44 3269 2842 482 274 19 42 chr5 5830099 5830143 -197255389 - L2 LINE L2 -788 2526 2482 2045 202 44 13 chr5 5830143 5830594 -197254938 - MLT1C LTR MaLR -2 465 1 482 274 19 42 chr5 5830594 5830764 -197254768 - L2 LINE L2 -832 2482 2317 454 226 70 148 chr5 5832064 5832558 -197252974 - L1ME LINE L1 -3289 2840 2425 1997 149 0 0 chr5 5832558 5832874 -197252658 - AluSx SINE Alu 0 316 1 454 226 70 148 chr5 5832874 5833147 -197252385 - L1ME LINE L1 -3704 2425 2132 1669 147 110 40 chr5 5833407 5833753 -197251779 + THE1C LTR MaLR 1 370 -5 228 241 161 0 chr5 5833758 5833845 -197251687 - L1ME LINE L1 -6015 104 4 22 35 0 0 chr5 5833854 5833883 -197251649 + AT_rich Low_complexity Low_complexity 1 29 0 209 138 17 52 chr5 5834016 5834074 -197251458 + (TA)n Simple_repeat Simple_repeat 2 57 0 2822 129 26 5 chr5 5834106 5834525 -197251007 + MSTA LTR MaLR 1 428 0 4831 144 2 188 chr5 5834527 5834995 -197250537 + MSTA-int LTR MaLR 3 282 -1298 1281 126 0 22 chr5 5834995 5835177 -197250355 + AluSx SINE Alu 40 217 -95 4831 144 2 188 chr5 5835177 5835854 -197249678 + MSTA-int LTR MaLR 282 1083 -497 384 89 38 25 chr5 5836274 5836353 -197249179 + T-rich Low_complexity Low_complexity 2 81 0 1851 164 6 25 chr5 5836355 5836672 -197248860 - AluJo SINE Alu -1 311 1 518 236 27 0 chr5 5837938 5838048 -197247484 - MER81 DNA DNA 0 114 2 288 229 72 24 chr5 5838296 5838379 -197247153 + MLT1K LTR MaLR 502 588 0 203 294 0 35 chr5 5838504 5838589 -197246943 - L3 LINE CR1 -22 1555 1474 2663 52 0 0 chr5 5839097 5839402 -197246130 + AluY SINE Alu 1 305 -6 259 302 112 39 chr5 5839485 5839717 -197245815 - MLT1K LTR MaLR 0 588 340 796 203 88 39 chr5 5840080 5840379 -197245153 + MLT1A2 LTR MaLR 1 370 -4 235 219 73 42 chr5 5840589 5840685 -197244847 + MER5A DNA MER1_type 65 163 -26 227 294 52 37 chr5 5840711 5840847 -197244685 + L2 LINE L2 2947 3084 -188 1939 148 20 7 chr5 5840937 5841235 -197244297 - AluJb SINE Alu -9 303 2 355 277 0 0 chr5 5843618 5843683 -197241849 - MER2 DNA MER2_type -1 344 280 873 184 24 68 chr5 5843718 5843925 -197241607 + LTR18B LTR ERVL 1 198 -416 * 1448 113 156 19 chr5 5843921 5844178 -197241354 + LTR18B LTR ERVL 323 614 0 395 56 19 0 chr5 5844179 5844227 -197241305 - MER2 DNA MER2_type -135 210 162 1194 152 3 21 chr5 5844227 5844608 -197240924 - LTR32 LTR ERVL 0 471 6 1019 165 28 6 chr5 5844585 5844761 -197240771 - MER2 DNA MER2_type -165 180 1 * 1436 182 79 65 chr5 5845711 5846327 -197239205 + MLT1D LTR MaLR 1 505 0 2993 158 19 6 chr5 5846912 5847437 -197238095 + L1MB3 LINE L1 5651 6182 -1 274 271 79 50 chr5 5848505 5848645 -197236887 - L2 LINE L2 -26 3246 3103 1376 190 61 98 chr5 5849447 5849650 -197235882 - MLT1C LTR MaLR 0 467 258 1583 157 7 23 chr5 5849650 5849956 -197235576 - L1MA4 LINE L1 -1 6299 5999 1376 190 61 98 chr5 5849956 5850230 -197235302 - MLT1C LTR MaLR -209 258 8 238 319 194 19 chr5 5850249 5850563 -197234969 - L2 LINE L2 -910 2404 2036 275 254 140 12 chr5 5851397 5851561 -197233971 - MLT1I LTR MaLR 0 417 268 410 331 35 18 chr5 5853130 5853299 -197232233 - L2 LINE L2 0 3272 3101 323 305 17 0 chr5 5854397 5854515 -197231017 + MIR3 SINE MIR 82 201 -7 552 315 40 46 chr5 5855307 5855819 -197229713 + MER115 DNA AcHobo 54 665 -28 14212 179 79 16 chr5 5855860 5862932 -197222600 + L1MA1 LINE L1 13 7543 -178 5994 195 38 30 chr5 5862932 5863652 -197221880 - L1 LINE L1 -2695 3633 2920 879 190 0 0 chr5 5863652 5863810 -197221722 - L1PB4 LINE L1 -3 6153 5996 5994 195 38 30 chr5 5863810 5866699 -197218833 - L1 LINE L1 -3408 2920 4 615 220 69 0 chr5 5867131 5867290 -197218242 - MER45A DNA AcHobo -8 170 1 550 287 24 12 chr5 5867293 5867457 -197218075 - MIR SINE MIR -62 200 35 1591 174 18 18 chr5 5868294 5868599 -197216933 - AluJo SINE Alu 0 305 1 1313 201 7 0 chr5 5870074 5870377 -197215155 - L1PA13 LINE L1 -909 5888 5584 * 34901 93 13 10 chr5 5870367 5876483 -197209049 + L1PA6 LINE L1 11 6141 -13 8988 197 32 11 chr5 5876598 5878683 -197206849 - L1PA13 LINE L1 -1178 5619 3491 40203 56 4 0 chr5 5878701 5884833 -197200699 - L1PA5 LINE L1 -1 6153 1 5050 222 32 5 chr5 5884845 5886546 -197198986 - L1PA13 LINE L1 -3303 3494 1748 1194 129 143 34 chr5 5886547 5886683 -197198849 + MSTA LTR MaLR 1 121 -307 186 43 0 0 chr5 5886683 5886706 -197198826 + (TC)n Simple_repeat Simple_repeat 1 23 0 1194 129 143 34 chr5 5886706 5886893 -197198639 + MSTA LTR MaLR 121 428 0 1056 140 4 72 chr5 5886893 5887129 -197198403 - L1PA13 LINE L1 -5036 1751 1532 779 228 34 15 chr5 5887856 5888062 -197197470 + MLT1A1 LTR MaLR 156 365 0 1029 279 68 14 chr5 5888212 5888639 -197196893 - LTR16A LTR ERVL 0 450 1 288 262 0 12 chr5 5888646 5888730 -197196802 + Charlie7 DNA MER1_type 2530 2612 0 21 0 0 0 chr5 5889114 5889135 -197196397 + AT_rich Low_complexity Low_complexity 1 21 0 584 167 0 0 chr5 5889609 5889723 -197195809 - L1MA8 LINE L1 -22 6269 6156 37926 73 8 4 chr5 5890353 5896476 -197189056 - L1PA5 LINE L1 -2 6152 5 1656 191 46 114 chr5 5897223 5898028 -197187504 + LTR8A LTR ERV1 1 727 0 323 241 98 45 chr5 5898720 5898853 -197186679 - MIR SINE MIR -2 260 121 692 271 44 6 chr5 5898999 5899221 -197186311 + MIR SINE MIR 30 255 -7 1520 159 6 28 chr5 5899226 5899552 -197185980 + L1MA6 LINE L1 5982 6300 0 203 346 28 28 chr5 5899628 5899735 -197185797 + MIR3 SINE MIR 70 176 -32 1006 156 91 0 chr5 5899842 5900041 -197185491 + L1PA16 LINE L1 5947 6163 -3 1804 171 49 38 chr5 5900348 5900797 -197184735 - Charlie4a DNA MER1_type -11 497 44 1001 231 33 0 chr5 5903679 5903891 -197181641 - MER20 DNA MER1_type 0 219 1 219 261 31 0 chr5 5904296 5904361 -197181171 + (TCTCTG)n Simple_repeat Simple_repeat 2 68 0 603 144 0 11 chr5 5904534 5904722 -197180810 - L1MB2 LINE L1 -7 6164 5815 339 136 0 0 chr5 5904722 5904781 -197180751 + (TCC)n Simple_repeat Simple_repeat 3 61 0 1995 98 56 0 chr5 5904781 5905047 -197180485 - AluSq SINE Alu -32 281 1 2763 156 4 2 chr5 5905050 5905538 -197179994 - L1MB2 LINE L1 -350 5821 5333 927 172 60 60 chr5 5907070 5907303 -197178229 + MER106A DNA MER1_type 3 235 -1 737 321 138 30 chr5 5907777 5908585 -197176947 - L2 LINE L2 -2 3311 2186 1003 238 38 61 chr5 5909000 5909395 -197176137 - L1MA9 LINE L1 -25 6287 5902 261 0 0 0 chr5 5910897 5910926 -197174606 + (CA)n Simple_repeat Simple_repeat 2 30 0 362 284 69 17 chr5 5911647 5911763 -197173769 + MIR3 SINE MIR 49 170 -38 24 0 0 0 chr5 5912212 5912236 -197173296 + AT_rich Low_complexity Low_complexity 1 24 0 1964 131 67 64 chr5 5912325 5912699 -197172833 + THE1C LTR MaLR 1 375 0 2524 107 14 3 chr5 5914131 5914477 -197171055 - L1PB1 LINE L1 -3 6148 5799 2302 153 135 7 chr5 5914581 5915032 -197170500 + MLT2B1 LTR ERVL 1 509 -11 333 0 0 0 chr5 5915784 5915821 -197169711 + (CA)n Simple_repeat Simple_repeat 2 38 0 288 182 73 0 chr5 5915962 5916017 -197169515 - MLT1K LTR MaLR 0 588 530 12323 165 34 43 chr5 5916268 5919727 -197165805 - L1M1 LINE L1 -510 5792 2367 1062 211 124 60 chr5 5919731 5920166 -197165366 - MLT1C LTR MaLR 0 467 5 783 236 28 6 chr5 5920279 5920457 -197165075 + MER5A DNA MER1_type 4 185 -4 2068 182 63 40 chr5 5920720 5921164 -197164368 + MLT1C LTR MaLR 9 462 -5 4257 151 15 34 chr5 5924529 5924584 -197160948 - LTR8A LTR ERV1 0 727 672 1920 162 58 36 chr5 5924584 5924949 -197160583 + THE1C LTR MaLR 1 373 -2 4257 151 15 34 chr5 5924949 5925634 -197159898 - LTR8A LTR ERV1 -55 672 1 7445 54 17 0 chr5 5925924 5927208 -197158324 + L1PA7 LINE L1 4854 6152 -2 650 188 8 0 chr5 5927669 5927786 -197157746 - MLT1B LTR MaLR 0 467 350 * 1785 233 97 61 chr5 5927783 5928483 -197157049 + MER50 LTR ERV1 10 734 0 1373 142 9 108 chr5 5928484 5928800 -197156732 - MLT1B LTR MaLR -105 285 1 259 137 0 39 chr5 5930272 5930323 -197155209 - MLT2D LTR ERVL 0 464 416 734 200 23 9 chr5 5930326 5930581 -197154951 - MLT2D LTR ERVL -194 220 1 238 240 27 53 chr5 5930921 5930996 -197154536 + L3 LINE CR1 602 674 -903 507 313 129 41 chr5 5932633 5933350 -197152182 + L2 LINE L2 2544 3313 0 413 197 26 0 chr5 5933641 5933717 -197151815 + MER21B LTR ERV1 17 94 -769 446 245 73 81 chr5 5933726 5933800 -197151732 - L1ME4a LINE L1 -177 5944 5871 2588 180 19 41 chr5 5933800 5934316 -197151216 + MLT1D LTR MaLR 1 505 0 446 245 73 81 chr5 5934316 5934443 -197151089 - L1ME4a LINE L1 -250 5871 5745 3973 107 58 2 chr5 5934443 5935012 -197150520 - LTR43 LTR ERV1 -1 601 1 446 245 73 81 chr5 5935012 5935193 -197150339 - L1ME4a LINE L1 -376 5745 5564 28 48 0 0 chr5 5935687 5935729 -197149803 + AT_rich Low_complexity Low_complexity 1 42 0 1406 216 76 38 chr5 5936446 5936891 -197148641 - MLT1C LTR MaLR 0 467 6 1985 204 78 21 chr5 5936980 5937059 -197148473 + MER89 LTR ERV1 2 75 -484 2307 110 59 31 chr5 5937059 5937413 -197148119 - THE1B LTR MaLR 0 364 1 1985 204 78 21 chr5 5937413 5937444 -197148088 + MER89 LTR ERV1 75 103 -456 2381 117 0 61 chr5 5937444 5937803 -197147729 + MER1B DNA MER1_type 1 337 0 1985 204 78 21 chr5 5937803 5938215 -197147317 + MER89 LTR ERV1 103 555 -4 584 242 81 38 chr5 5940046 5940445 -197145087 - MLT1D LTR MaLR -11 615 4 21 36 0 0 chr5 5940948 5940976 -197144556 + AT_rich Low_complexity Low_complexity 1 28 0 5694 91 0 0 chr5 5943000 5943705 -197141827 - L1PA10 LINE L1 -16 6152 5448 526 85 12 0 chr5 5943705 5943787 -197141745 + L1P LINE L1 5344 5426 -742 749 226 5 0 chr5 5943927 5944117 -197141415 + L1MA4 LINE L1 6110 6300 0 2120 104 22 0 chr5 5944197 5944475 -197141057 + AluSx SINE Alu 1 284 -28 28 29 0 0 chr5 5944475 5944510 -197141022 + AT_rich Low_complexity Low_complexity 1 35 0 328 191 38 107 chr5 5944780 5944911 -197140621 - L1MA4 LINE L1 0 6300 6179 * 338 302 21 58 chr5 5944830 5945019 -197140513 - L1PA16 LINE L1 -33 6133 5952 892 250 83 70 chr5 5945105 5945561 -197139971 + MLT1C LTR MaLR 6 467 0 1785 119 42 18 chr5 5945641 5945927 -197139605 + L1MC1 LINE L1 6033 6325 -8 1516 301 191 43 chr5 5946223 5947748 -197137784 + L2 LINE L2 1137 2887 -427 2660 172 14 2 chr5 5947771 5948190 -197137342 + MSTB LTR MaLR 1 424 -2 1349 181 0 14 chr5 5948223 5948444 -197137088 - MER20 DNA MER1_type -1 218 1 4523 166 159 31 chr5 5948483 5949512 -197136020 - L1P LINE L1 -4397 1749 589 15762 90 16 0 chr5 5949528 5952412 -197133120 + L1PA7 LINE L1 3253 6153 -1 2806 113 14 0 chr5 5952462 5952832 -197132700 + THE1C LTR MaLR 1 375 0 406 204 65 19 chr5 5952847 5952955 -197132577 + MIR SINE MIR 118 230 -32 2241 185 42 81 chr5 5953397 5953938 -197131594 + MLT2B1 LTR ERVL 1 520 0 621 251 29 12 chr5 5953938 5954109 -197131423 - MLT1J2 LTR MaLR -269 181 8 210 318 16 0 chr5 5954136 5954199 -197131333 + L2 LINE L2 3248 3311 -2 28 0 0 0 chr5 5954245 5954273 -197131259 + AT_rich Low_complexity Low_complexity 1 28 0 225 239 16 43 chr5 5954273 5954457 -197131075 + (TTA)n Simple_repeat Simple_repeat 1 179 0 33 0 0 0 chr5 5954460 5954493 -197131039 + AT_rich Low_complexity Low_complexity 1 33 0 354 233 35 35 chr5 5954564 5954650 -197130882 + MIR SINE MIR 51 136 -72 404 194 0 11 chr5 5955092 5955185 -197130347 + MER53 DNA DNA 97 188 -1 1349 196 99 54 chr5 5956235 5956402 -197129130 + MLT1B LTR MaLR 1 159 -231 2199 117 3 10 chr5 5956402 5956709 -197128823 + AluSc SINE Alu 1 305 -4 1349 196 99 54 chr5 5956709 5956914 -197128618 + MLT1B LTR MaLR 159 390 0 292 324 76 0 chr5 5960767 5960912 -197124620 - L1ME4a LINE L1 -2 6119 5964 338 224 0 0 chr5 5960937 5961004 -197124528 - MLT1H LTR MaLR -2 547 481 4777 124 35 11 chr5 5961015 5961757 -197123775 - MER4E LTR ERV1 0 779 20 320 305 12 43 chr5 5962333 5962383 -197123149 - L1ME4a LINE L1 -171 5950 5900 1364 216 32 118 chr5 5962383 5962952 -197122580 - MLT2B1 LTR ERVL 0 520 1 320 305 12 43 chr5 5962952 5963065 -197122467 - L1ME4a LINE L1 -221 5900 5792 507 271 73 53 chr5 5963227 5963474 -197122058 - L2 LINE L2 -5 3308 3057 410 274 45 67 chr5 6065145 6065324 -197020208 - MER5B DNA MER1_type -3 175 1 1453 187 127 31 chr5 6066277 6066662 -197018870 - Charlie1 DNA MER1_type -58 2703 2282 412 305 64 0 chr5 6066655 6066796 -197018736 - Charlie1 DNA MER1_type -2611 150 1 * 319 348 106 28 chr5 6067548 6068189 -197017343 + L2 LINE L2 2040 2730 -584 452 301 99 6 chr5 6068315 6068620 -197016912 - L1ME LINE L1 -5605 465 125 331 239 229 0 chr5 6070002 6070111 -197015421 + L2 LINE L2 3122 3255 -17 468 230 121 40 chr5 6070614 6070788 -197014744 + L1ME LINE L1 5513 5700 -470 1160 103 7 0 chr5 6070877 6071032 -197014500 - L1PA15 LINE L1 -8 6157 6002 2089 122 13 7 chr5 6071130 6071433 -197014099 + AluSx SINE Alu 1 305 -7 2173 117 3 3 chr5 6071434 6071734 -197013798 + AluSx SINE Alu 2 301 -11 23 33 0 0 chr5 6071921 6071951 -197013581 + AT_rich Low_complexity Low_complexity 1 30 0 26 0 0 0 chr5 6072504 6072530 -197013002 + AT_rich Low_complexity Low_complexity 1 26 0 845 265 142 0 chr5 6072564 6072783 -197012749 + MIR SINE MIR 6 255 -7 1581 206 14 89 chr5 6073194 6073270 -197012262 + MSTD LTR MaLR 1 81 -315 2324 97 3 0 chr5 6073270 6073570 -197011962 - AluY SINE Alu -10 301 1 1581 206 14 89 chr5 6073570 6073921 -197011611 + MSTD LTR MaLR 81 396 0 481 260 133 17 chr5 6073970 6074151 -197011381 + MLT1H LTR MaLR 346 547 -2 3785 105 20 0 chr5 6074373 6074879 -197010653 - L1PA10 LINE L1 -1 6167 5652 6991 114 17 39 chr5 6074901 6075131 -197010401 - L1PA10 LINE L1 -494 5674 5441 2013 132 7 3 chr5 6075131 6075418 -197010114 - AluSx SINE Alu -24 288 1 6991 114 17 39 chr5 6075418 6076623 -197008909 - L1PA10 LINE L1 -727 5441 4277 1220 204 4 4 chr5 6076644 6076874 -197008658 - L1P3 LINE L1 -4946 929 700 910 201 54 10 chr5 6077075 6077279 -197008253 + MER20 DNA MER1_type 7 219 0 830 266 64 53 chr5 6078084 6078445 -197007087 - MLT2F LTR ERVL -19 644 280 1048 196 47 17 chr5 6078461 6078696 -197006836 + MER96B DNA MER1_type? 176 417 0 545 339 23 23 chr5 6078700 6078957 -197006575 - MLT2F LTR ERVL -390 273 17 29 0 0 0 chr5 6081136 6081165 -197004367 + AT_rich Low_complexity Low_complexity 1 29 0 268 203 8 154 chr5 6082471 6082594 -197002938 + MER102a DNA MER1_type 222 326 -4 23 0 0 0 chr5 6083136 6083159 -197002373 + AT_rich Low_complexity Low_complexity 1 23 0 365 268 5 15 chr5 6083717 6083877 -197001655 + CT-rich Low_complexity Low_complexity 1 161 -330 2060 127 3 10 chr5 6083877 6084177 -197001355 - AluSx SINE Alu -13 299 2 365 268 5 15 chr5 6084177 6084213 -197001319 + CT-rich Low_complexity Low_complexity 161 491 0 465 286 15 53 chr5 6084615 6084825 -197000707 + MIR SINE MIR 62 262 0 325 334 75 93 chr5 6086916 6087248 -196998284 + L2 LINE L2 2942 3267 -5 377 327 186 10 chr5 6087451 6087757 -196997775 - L2 LINE L2 -1005 2309 1950 2486 215 18 28 chr5 6087878 6088193 -196997339 - MER68 LTR ERV1 -11 551 234 2593 109 31 14 chr5 6088193 6088551 -196996981 + THE1B LTR MaLR 1 364 0 11017 104 38 35 chr5 6088551 6090127 -196995405 + THE1B-int LTR MaLR 1 1580 0 2598 131 8 3 chr5 6090129 6090489 -196995043 + THE1B LTR MaLR 3 364 0 2486 215 18 28 chr5 6090489 6090672 -196994860 - MER68 LTR ERV1 -328 234 54 631 289 80 56 chr5 6091352 6092315 -196993217 + L1MEc LINE L1 835 1703 -4512 436 296 32 26 chr5 6092480 6092669 -196992863 + L2 LINE L2 2511 2700 -614 1983 128 3 20 chr5 6093114 6093418 -196992114 - AluSx SINE Alu -13 299 1 207 310 13 95 chr5 6094089 6094199 -196991333 + MIR3 SINE MIR 13 108 -100 2146 87 20 13 chr5 6094199 6094499 -196991033 + AluY SINE Alu 1 302 -9 207 310 13 95 chr5 6094499 6094546 -196990986 + MIR3 SINE MIR 108 157 -51 1669 168 0 38 chr5 6094849 6095164 -196990368 + AluJo SINE Alu 1 303 -9 322 336 0 8 chr5 6096281 6096403 -196989129 - L2 LINE L2 -5 3308 3188 369 258 156 21 chr5 6096502 6096688 -196988844 - Charlie8 DNA MER1_type -2141 276 66 225 0 0 0 chr5 6096709 6096734 -196988798 + (A)n Simple_repeat Simple_repeat 1 25 0 739 300 123 3 chr5 6096856 6097173 -196988359 + LTR16B LTR ERVL 20 374 -90 259 226 60 75 chr5 6098928 6099061 -196986471 - L1ME3A LINE L1 -9 6161 6031 486 233 23 8 chr5 6099170 6099299 -196986233 - L1ME3A LINE L1 -208 5962 5832 * 848 181 21 0 chr5 6099297 6099441 -196986091 + L1M3e LINE L1 158 304 -6726 2108 226 97 30 chr5 6099442 6100167 -196985365 + L1M3e LINE L1 1286 2058 -4972 1017 125 46 0 chr5 6100179 6100331 -196985201 - L1PA11 LINE L1 0 6174 6016 3353 155 11 33 chr5 6100332 6100966 -196984566 - L1MA4 LINE L1 -15 6285 5666 259 293 55 22 chr5 6100970 6101151 -196984381 - L1MEd LINE L1 -5338 781 595 340 196 0 150 chr5 6101939 6101963 -196983569 + MER105 DNA DNA 33 59 -145 4883 165 10 33 chr5 6101963 6102775 -196982757 - MER54B LTR ERVL 0 793 1 340 196 0 150 chr5 6102775 6102903 -196982629 + MER105 DNA DNA 59 162 -42 2695 166 17 23 chr5 6103328 6103798 -196981734 + MLT1C LTR MaLR 1 467 0 2060 168 25 98 chr5 6104144 6104632 -196980900 + MER66A LTR ERV1 27 478 0 24 0 0 0 chr5 6104905 6104929 -196980603 + AT_rich Low_complexity Low_complexity 1 24 0 501 309 124 0 chr5 6108217 6108411 -196977121 + MIR SINE MIR 9 226 -36 27 0 0 0 chr5 6108988 6109015 -196976517 + AT_rich Low_complexity Low_complexity 1 27 0 1399 165 15 4 chr5 6109044 6109304 -196976228 - L1MA7 LINE L1 -9 6282 6020 318 294 76 34 chr5 6109376 6109495 -196976037 + MIR3 SINE MIR 83 206 -2 1173 158 5 26 chr5 6109705 6109895 -196975637 - MER5A DNA MER1_type -3 186 1 1150 256 92 19 chr5 6109909 6110323 -196975209 + LTR16A1 LTR ERVL 14 457 0 1137 140 8 103 chr5 6112504 6112747 -196972785 - MLT1A2 LTR MaLR -154 220 1 338 342 128 53 chr5 6113089 6113537 -196971995 - L2 LINE L2 -65 3207 2725 1519 247 112 34 chr5 6113557 6114022 -196971510 + MLT1E LTR MaLR 3 503 -90 377 247 0 0 chr5 6114161 6114246 -196971286 + MLT1E LTR MaLR 569 653 -1 2205 118 3 10 chr5 6115151 6115464 -196970068 + AluSx SINE Alu 2 312 0 383 300 136 36 chr5 6115527 6115692 -196969840 + L1MCc LINE L1 1282 1429 -5693 1732 260 33 18 chr5 6115692 6116149 -196969383 - LTR40c LTR ERVL -1 464 1 383 300 136 36 chr5 6116149 6116773 -196968759 + L1MCc LINE L1 1429 2361 -4761 785 126 8 8 chr5 6116778 6116939 -196968593 + AluY SINE Alu 180 311 0 345 299 45 6 chr5 6116948 6117105 -196968427 + L1MCc LINE L1 2367 2529 -4593 432 230 67 67 chr5 6119498 6119663 -196965869 + MER5A DNA MER1_type 25 189 0 329 319 11 0 chr5 6119846 6119940 -196965592 - L2 LINE L2 -3 3310 3216 289 187 220 0 chr5 6119972 6120063 -196965469 + L2 LINE L2 3202 3312 -1 560 293 153 58 chr5 6120247 6120714 -196964818 - ERVL LTR ERVL -4057 1707 1143 192 77 0 0 chr5 6120714 6120740 -196964792 + (CAGC)n Simple_repeat Simple_repeat 1 26 0 560 293 153 58 chr5 6120740 6121010 -196964522 - ERVL LTR ERVL -4621 1143 900 1178 155 23 41 chr5 6121175 6121394 -196964138 + MER20 DNA MER1_type 1 215 -4 2315 113 89 15 chr5 6121461 6121798 -196963734 - THE1B LTR MaLR -2 362 1 220 289 132 8 chr5 6121944 6122065 -196963467 - MIR3 SINE MIR -69 139 4 353 305 153 25 chr5 6123350 6123553 -196961979 - MIR SINE MIR -10 252 24 315 217 101 0 chr5 6123943 6124012 -196961520 + MER116 DNA Mariner 1 76 -4 21 0 0 0 chr5 6124014 6124035 -196961497 + AT_rich Low_complexity Low_complexity 1 21 0 4497 101 5 15 chr5 6124361 6124967 -196960565 + MER4A LTR ERV1 1 600 0 191 287 154 37 chr5 6125701 6125837 -196959695 + MIR3 SINE MIR 19 170 -38 324 294 42 25 chr5 6125925 6126044 -196959488 + L3b LINE CR1 1129 1249 -334 304 308 68 14 chr5 6126399 6126620 -196958912 - L1ME LINE L1 -392 5729 5497 267 31 0 0 chr5 6127115 6127147 -196958385 + (TG)n Simple_repeat Simple_repeat 1 32 0 288 184 64 21 chr5 6127157 6127531 -196958001 + (TCTA)n Simple_repeat Simple_repeat 1 439 -24 312 91 0 0 chr5 6127531 6127575 -196957957 + (TCCA)n Simple_repeat Simple_repeat 1 44 0 288 184 64 21 chr5 6127575 6127602 -196957930 + (TCTA)n Simple_repeat Simple_repeat 439 463 0 191 276 16 114 chr5 6129295 6129327 -196956205 - L2 LINE L2 -227 3045 3011 2310 125 0 0 chr5 6129327 6129640 -196955892 + AluSq SINE Alu 1 313 0 191 276 16 114 chr5 6129640 6129730 -196955802 - L2 LINE L2 -261 3011 2935 447 330 122 36 chr5 6129876 6129951 -196955581 - L2 LINE L2 -535 2779 2712 1334 208 3 61 chr5 6129951 6130118 -196955414 - AluJb SINE Alu -17 295 153 240 59 0 0 chr5 6130118 6130152 -196955380 + (TG)n Simple_repeat Simple_repeat 1 34 0 1334 208 3 61 chr5 6130152 6130297 -196955235 - AluJb SINE Alu -159 153 1 447 330 122 36 chr5 6130297 6131001 -196954531 - L2 LINE L2 -602 2712 1933 28 102 0 0 chr5 6131600 6131698 -196953834 + AT_rich Low_complexity Low_complexity 1 98 0 1048 240 71 106 chr5 6131709 6132220 -196953312 + L1MC4 LINE L1 6637 7123 -838 2679 99 34 6 chr5 6132220 6132574 -196952958 + THE1B LTR MaLR 1 364 0 1048 240 71 106 chr5 6132574 6132630 -196952902 + L1MC4 LINE L1 7123 7179 -782 2209 94 14 3 chr5 6132892 6133178 -196952354 - AluSq SINE Alu -16 297 9 261 324 135 40 chr5 6133548 6133919 -196951613 + LTR33 LTR ERVL 116 521 0 186 133 0 0 chr5 6133986 6134016 -196951516 + (TTTC)n Simple_repeat Simple_repeat 1 30 0 219 127 36 18 chr5 6134042 6134097 -196951435 + CT-rich Low_complexity Low_complexity 2 57 0 624 136 0 68 chr5 6134097 6134288 -196951244 + (TTCCC)n Simple_repeat Simple_repeat 2 179 0 569 235 37 37 chr5 6134336 6134498 -196951034 + MER106B DNA MER1_type 897 1058 -1 180 0 0 0 chr5 6134710 6134730 -196950802 + (T)n Simple_repeat Simple_repeat 1 20 0 284 289 149 35 chr5 6134873 6135074 -196950458 + L1MC4a LINE L1 5692 5915 -1893 2316 96 0 0 chr5 6135101 6135402 -196950130 + AluY SINE Alu 1 301 -10 236 327 14 108 chr5 6135460 6135683 -196949849 - L2 LINE L2 -247 3066 2865 217 299 13 13 chr5 6135834 6135911 -196949621 - MIR SINE MIR -121 141 65 349 292 6 35 chr5 6137214 6137385 -196948147 - L1ME4a LINE L1 -278 5843 5678 683 290 98 45 chr5 6137488 6137885 -196947647 + MLT1J LTR MaLR 85 502 -9 325 359 14 14 chr5 6138162 6138307 -196947225 + MER5B DNA MER1_type 34 178 0 1002 256 209 2 chr5 6138917 6139339 -196946193 + MLT1H LTR MaLR 39 547 -2 1764 173 37 58 chr5 6139672 6140054 -196945478 + THE1C LTR MaLR 1 374 -1 680 187 65 0 chr5 6140115 6140254 -196945278 - L1MB7 LINE L1 -20 6164 6017 310 262 103 8 chr5 6140744 6140870 -196944662 - L1ME4a LINE L1 -6 6115 5978 228 127 55 0 chr5 6142277 6142332 -196943200 + (TCTA)n Simple_repeat Simple_repeat 1 58 0 776 244 135 70 chr5 6144074 6144367 -196941165 - MLT1J LTR MaLR 0 511 182 1815 189 141 12 chr5 6144367 6144779 -196940753 - MLT1C LTR MaLR -2 465 1 776 244 135 70 chr5 6144779 6144899 -196940633 - MLT1J LTR MaLR -329 182 71 245 292 142 33 chr5 6144928 6145048 -196940484 + L2 LINE L2 3101 3233 -39 207 104 62 0 chr5 6145410 6145458 -196940074 + (TA)n Simple_repeat Simple_repeat 2 52 0 547 304 164 44 chr5 6145474 6145924 -196939608 - L2 LINE L2 -2 3311 2808 571 321 146 0 chr5 6145935 6146222 -196939310 - L2 LINE L2 -960 2354 2026 2108 208 6 0 chr5 6146383 6146744 -196938788 - MLT1A1 LTR MaLR -2 363 1 421 275 140 0 chr5 6147422 6147600 -196937932 - L2 LINE L2 -1291 2023 1821 403 164 27 0 chr5 6147868 6147941 -196937591 - L1MD1 LINE L1 -1 6241 6167 1745 191 77 9 chr5 6148086 6148436 -196937096 - MLT1A2 LTR MaLR 0 374 1 3306 247 89 70 chr5 6148439 6149776 -196935756 - MLT1A2-int LTR MaLR -5 1366 5 27 0 0 0 chr5 6149829 6149856 -196935676 + AT_rich Low_complexity Low_complexity 1 27 0 15044 154 47 13 chr5 6149876 6154824 -196930708 - L1PB1 LINE L1 -2 6865 1626 2304 96 0 3 chr5 6154824 6155126 -196930406 - AluY SINE Alu -10 301 1 15044 154 47 13 chr5 6155126 6156155 -196929377 - L1PB1 LINE L1 -5241 1626 634 1226 138 10 0 chr5 6156155 6156351 -196929181 - L1PB1 LINE L1 -6663 200 3 1559 223 36 31 chr5 6156371 6156565 -196928967 - MLT1A2 LTR MaLR -13 361 163 1874 132 4 0 chr5 6156565 6156837 -196928695 - AluSx SINE Alu -39 273 1 1559 223 36 31 chr5 6156837 6157001 -196928531 - MLT1A2 LTR MaLR -211 163 1 227 328 86 8 chr5 6157174 6157302 -196928230 + L2 LINE L2 2965 3102 -170 767 184 123 0 chr5 6157469 6157632 -196927900 - MER20 DNA MER1_type 0 219 37 265 375 15 29 chr5 6159144 6159280 -196926252 - MIR SINE MIR -58 150 17 1638 216 66 46 chr5 6159333 6159832 -196925700 - L1MB7 LINE L1 -10 6174 5666 730 188 78 42 chr5 6160399 6160591 -196924941 - MER20 DNA MER1_type -20 199 1 306 73 0 0 chr5 6160985 6161026 -196924506 + (T)n Simple_repeat Simple_repeat 1 41 0 420 213 12 0 chr5 6161180 6161260 -196924272 + MER81 DNA DNA 2 82 -32 183 263 0 0 chr5 6162317 6162355 -196923177 - L2 LINE L2 -25 3247 3210 1337 144 25 24 chr5 6162579 6162818 -196922714 + L1MA5A LINE L1 6060 6299 -1 31 0 0 0 chr5 6163337 6163368 -196922164 + AT_rich Low_complexity Low_complexity 1 31 0 200 288 0 14 chr5 6165465 6165538 -196919994 + (TATATG)n Simple_repeat Simple_repeat 1 72 0 411 222 111 92 chr5 6165923 6166019 -196919513 + MER5B DNA MER1_type 13 115 -63 2003 177 0 0 chr5 6166019 6166330 -196919202 - AluSx SINE Alu -1 311 1 411 222 111 92 chr5 6166330 6166386 -196919146 + MER5B DNA MER1_type 115 168 -10 231 36 0 0 chr5 6166529 6166557 -196918975 + (TG)n Simple_repeat Simple_repeat 2 29 0 1964 130 7 36 chr5 6166807 6167114 -196918418 + AluSx SINE Alu 1 298 -14 204 97 0 0 chr5 6167124 6167155 -196918377 + (CA)n Simple_repeat Simple_repeat 2 32 0 1152 285 21 5 chr5 6167187 6167570 -196917962 + HsTC2c DNA Tc2 29 417 -312 580 285 121 16 chr5 6167649 6167954 -196917578 + MLT1I LTR MaLR 54 390 -19 767 259 32 16 chr5 6167991 6168242 -196917290 + HsTC2c DNA Tc2 470 724 -5 22 0 0 0 chr5 6169133 6169155 -196916377 + AT_rich Low_complexity Low_complexity 1 22 0 351 296 58 48 chr5 6169497 6169686 -196915846 + MIR3 SINE MIR 11 201 -7 261 310 112 35 chr5 6170566 6170682 -196914850 - L2 LINE L2 -5 3267 3143 438 268 60 36 chr5 6171055 6171223 -196914309 + MER5B DNA MER1_type 3 174 -4 233 214 133 31 chr5 6171784 6171882 -196913650 - MARNA DNA Mariner -198 388 281 1314 221 88 16 chr5 6172746 6173131 -196912401 + MLT1C LTR MaLR 1 413 -54 817 260 28 44 chr5 6173594 6173844 -196911688 - MIR SINE MIR -2 260 15 21 0 0 0 chr5 6174141 6174162 -196911370 + AT_rich Low_complexity Low_complexity 1 21 0 1168 295 166 16 chr5 6175681 6176638 -196908894 - L2 LINE L2 0 3313 2215 301 26 0 0 chr5 6176642 6176681 -196908851 + MLT2C1 LTR ERVL 3 41 -356 * 1567 174 50 23 chr5 6176677 6177019 -196908513 - MLT2C1 LTR ERVL -35 485 30 216 0 0 0 chr5 6177054 6177078 -196908454 + (CA)n Simple_repeat Simple_repeat 1 24 0 980 297 122 42 chr5 6177115 6177779 -196907753 - L2 LINE L2 -1093 2221 1505 181 211 0 26 chr5 6177791 6177829 -196907703 - MER5A DNA MER1_type -6 183 147 14080 134 24 15 chr5 6177835 6178334 -196907198 + Tigger1 DNA MER2_type 1 494 -1924 2400 179 17 2 chr5 6178334 6178754 -196906778 - MSTB LTR MaLR 0 426 1 14080 134 24 15 chr5 6178754 6179573 -196905959 + Tigger1 DNA MER2_type 494 1304 -1114 2783 16 0 0 chr5 6179573 6179877 -196905655 + AluYb8 SINE Alu 2 305 -13 14080 134 24 15 chr5 6179877 6180953 -196904579 + Tigger1 DNA MER2_type 1304 2418 0 535 257 219 25 chr5 6180955 6181192 -196904340 - L2 LINE L2 -1814 1500 1218 21894 149 18 16 chr5 6181192 6186517 -196899015 + L1MA3 LINE L1 1 5351 -2214 7304 145 19 7 chr5 6186552 6188973 -196896559 + L1MA3 LINE L1 5264 7718 -6 299 296 109 23 chr5 6189024 6189281 -196896251 - L2 LINE L2 -2167 1147 869 336 234 9 65 chr5 6189349 6189456 -196896076 - L2 LINE L2 -2742 572 472 443 251 77 158 chr5 6189480 6189812 -196895720 - L2 LINE L2 -260 3053 2696 2092 113 20 0 chr5 6189812 6190105 -196895427 - AluSx SINE Alu -9 303 5 443 251 77 158 chr5 6190105 6190245 -196895287 - L2 LINE L2 -617 2696 2546 457 256 139 0 chr5 6190245 6190382 -196895150 - MIR SINE MIR -85 177 22 443 251 77 158 chr5 6190382 6190898 -196894634 - L2 LINE L2 -767 2546 2021 26 64 0 0 chr5 6192518 6192565 -196892967 + AT_rich Low_complexity Low_complexity 1 47 0 312 283 89 64 chr5 6192610 6193002 -196892530 - L1ME4a LINE L1 -96 6025 5624 2340 96 0 7 chr5 6194232 6194534 -196890998 - AluSc SINE Alu -9 300 1 479 226 16 8 chr5 6196637 6196761 -196888771 - L1ME4a LINE L1 -1827 4319 4195 591 79 11 0 chr5 6196761 6196850 -196888682 - 5S rRNA rRNA -31 90 1 2854 262 27 15 chr5 6196860 6197864 -196887668 - L1ME4a LINE L1 -1955 4191 3176 409 263 56 44 chr5 6198190 6198350 -196887182 - MER5A DNA MER1_type -1 188 27 232 321 124 7 chr5 6198379 6198516 -196887016 - MIR3 SINE MIR -24 184 32 25 75 0 0 chr5 6198561 6198614 -196886918 + AT_rich Low_complexity Low_complexity 1 53 0 373 198 21 0 chr5 6198808 6198904 -196886628 + LTR37A LTR ERV1 323 420 -6 202 246 0 18 chr5 6199047 6199104 -196886428 + T-rich Low_complexity Low_complexity 2 57 0 285 178 50 79 chr5 6201210 6201311 -196884221 + MER31-int LTR ERV1 2924 3021 -1915 329 181 74 87 chr5 6201443 6201592 -196883940 + MER31-int LTR ERV1 3171 3317 -1619 3572 116 73 38 chr5 6201662 6202145 -196883387 + MER41B LTR ERV1 1 512 -123 2254 104 7 3 chr5 6202145 6202452 -196883080 - AluSx SINE Alu -4 308 1 3572 116 73 38 chr5 6202452 6202581 -196882951 + MER41B LTR ERV1 512 635 0 7888 27 15 0 chr5 6202787 6203772 -196881760 - L1PA4 LINE L1 -1429 4717 3718 7398 32 8 0 chr5 6203772 6205201 -196880331 + L1PA4 LINE L1 4716 6151 -4 211 309 0 0 chr5 6206396 6206451 -196879081 - MIR3 SINE MIR -2 206 152 266 291 46 20 chr5 6207185 6207336 -196878196 + MLT1J1 LTR MaLR 5 159 -287 895 289 72 35 chr5 6207355 6207811 -196877721 - LTR33 LTR ERVL -46 475 3 2304 160 33 16 chr5 6208929 6209354 -196876178 + MSTB1 LTR MaLR 1 432 0 574 108 0 0 chr5 6209445 6209528 -196876004 + AluSg/x SINE Alu 219 301 -9 391 369 111 17 chr5 6209633 6210037 -196875495 + L2 LINE L2 1380 1821 -1493 2237 164 24 12 chr5 6210044 6210458 -196875074 + MSTB1 LTR MaLR 1 419 -13 634 331 177 34 chr5 6210477 6210816 -196874716 + L2 LINE L2 1828 2117 -1197 7061 65 4 0 chr5 6210816 6212307 -196873225 - L1PA8 LINE L1 -5 6167 4674 634 331 177 34 chr5 6212307 6212768 -196872764 + L2 LINE L2 2117 2743 -571 372 169 14 13 chr5 6213016 6213101 -196872431 - MLT1D LTR MaLR -438 67 1 22 70 0 0 chr5 6213777 6213820 -196871712 + AT_rich Low_complexity Low_complexity 1 43 0 1130 62 0 0 chr5 6214292 6214436 -196871096 + L1PA4 LINE L1 6009 6152 -3 2025 98 38 21 chr5 6215572 6215859 -196869673 + AluSp SINE Alu 1 292 -21 325 283 28 9 chr5 6216413 6216519 -196869013 + MIR3 SINE MIR 71 178 -30 22 0 0 0 chr5 6216621 6216643 -196868889 + AT_rich Low_complexity Low_complexity 1 22 0 188 286 131 24 chr5 6217382 6217466 -196868066 + MIR SINE MIR 37 129 -133 273 245 21 21 chr5 6217508 6217602 -196867930 - MER103 DNA DNA -1 165 72 395 135 289 19 chr5 6217838 6217942 -196867590 - MER104 DNA Tc2 -3 177 46 22 0 0 0 chr5 6218738 6218760 -196866772 + AT_rich Low_complexity Low_complexity 1 22 0 514 289 20 26 chr5 6220243 6220462 -196865070 - MIR SINE MIR -5 257 41 908 293 113 3 chr5 6221044 6221372 -196864160 - LTR16C LTR ERVL 0 491 128 2098 138 143 8 chr5 6222483 6222853 -196862679 + MSTA LTR MaLR 9 428 0 26 0 0 0 chr5 6222900 6222926 -196862606 + AT_rich Low_complexity Low_complexity 1 26 0 1807 186 8 37 chr5 6223428 6223804 -196861728 - MLT1A1 LTR MaLR 0 365 1 1305 201 0 0 chr5 6224343 6224567 -196860965 - MER58A DNA MER1_type 0 224 1 2281 159 5 10 chr5 6224619 6225016 -196860516 + MLT2C1 LTR ERVL 1 395 -2 202 290 19 28 chr5 6225114 6225221 -196860311 + L2 LINE L2 2371 2476 -838 479 345 113 10 chr5 6225285 6225832 -196859700 + L2 LINE L2 2656 3266 -47 305 339 25 77 chr5 6225860 6226226 -196859306 - L2 LINE L2 -27 3245 2899 1820 140 97 32 chr5 6226715 6227057 -196858475 - THE1B LTR MaLR 0 364 1 406 35 35 0 chr5 6228124 6228181 -196857351 + L1PA4 LINE L1 6095 6153 -2 1550 112 5 5 chr5 6231003 6231226 -196854306 - pTR5 LTR ERV1 -2044 394 172 333 229 31 0 chr5 6231229 6231325 -196854207 - LTR30 LTR ERV1 -80 642 544 6596 117 62 79 chr5 6231325 6232630 -196852902 - pTR5 LTR ERV1 -413 2025 743 192 77 0 0 chr5 6233393 6233419 -196852113 + (A)n Simple_repeat Simple_repeat 1 26 0 952 218 143 47 chr5 6235367 6235752 -196849780 - MLT1F1 LTR MaLR -2 565 144 632 290 49 42 chr5 6237133 6237573 -196847959 + MLT1H LTR MaLR 29 549 0 306 359 59 30 chr5 6237620 6237807 -196847725 - L2 LINE L2 -1100 2214 2034 2456 36 40 10 chr5 6237807 6238109 -196847423 - AluY SINE Alu 0 311 1 306 359 59 30 chr5 6238109 6238325 -196847207 - L2 LINE L2 -1280 2034 1799 1245 247 44 84 chr5 6238394 6239094 -196846438 - L1MC4 LINE L1 -39 8003 7332 237 33 0 0 chr5 6239104 6239134 -196846398 + (TTTTG)n Simple_repeat Simple_repeat 5 34 0 679 165 17 9 chr5 6239134 6239249 -196846283 - FLAM_C SINE Alu -26 117 2 457 279 30 16 chr5 6239260 6239465 -196846067 - L1M LINE L1 -748 5398 5209 2115 111 3 38 chr5 6239487 6239802 -196845730 + AluSc SINE Alu 1 304 -5 21 0 0 0 chr5 6239833 6239854 -196845678 + AT_rich Low_complexity Low_complexity 1 21 0 334 300 23 0 chr5 6239939 6240069 -196845463 - L1M4 LINE L1 -1096 5050 4918 242 278 28 0 chr5 6240313 6240385 -196845147 - L1M4 LINE L1 -1575 4571 4498 23 0 0 0 chr5 6241191 6241214 -196844318 + AT_rich Low_complexity Low_complexity 1 23 0 2022 146 18 15 chr5 6241288 6241630 -196843902 - MER61A LTR ERV1 0 343 1 229 293 40 10 chr5 6242818 6242917 -196842615 + (TATG)n Simple_repeat Simple_repeat 2 103 0 298 318 60 7 chr5 6243119 6243270 -196842262 - MIR SINE MIR -30 232 74 226 125 0 0 chr5 6244841 6244873 -196840659 - MLT2C2 LTR ERVL 0 554 523 2320 165 22 2 chr5 6245040 6245440 -196840092 - MLT2C2 LTR ERVL -56 408 1 283 182 0 0 chr5 6245545 6245600 -196839932 - Charlie8 DNA MER1_type -1002 1415 1361 234 91 0 0 chr5 6245692 6245725 -196839807 + (TCCC)n Simple_repeat Simple_repeat 4 36 0 1912 129 18 7 chr5 6245776 6246079 -196839453 + AluSx SINE Alu 1 306 0 4016 136 22 14 chr5 6246080 6246748 -196838784 - L1MB1 LINE L1 -23 6145 5472 340 142 55 8 chr5 6246748 6246875 -196838657 + (TA)n Simple_repeat Simple_repeat 2 134 0 1281 129 13 67 chr5 6246875 6247206 -196838326 - L1MB1 LINE L1 -743 5403 5157 282 294 220 0 chr5 6247565 6247742 -196837790 - Charlie8 DNA MER1_type -2157 260 45 1970 216 121 0 chr5 6247826 6248307 -196837225 - MLT1F LTR MaLR 0 542 4 574 263 105 70 chr5 6248479 6248541 -196836991 + MLT1L LTR MaLR 209 267 -348 1290 73 0 0 chr5 6248541 6248705 -196836827 - L1PA8 LINE L1 0 6172 6009 574 263 105 70 chr5 6248705 6248927 -196836605 + MLT1L LTR MaLR 267 503 -112 1677 105 0 0 chr5 6250035 6250281 -196835251 - AluSg/x SINE Alu 0 310 65 1960 136 0 11 chr5 6251884 6252170 -196833362 - AluSq SINE Alu -30 283 1 978 294 59 25 chr5 6252713 6253151 -196832381 - L1MC/D LINE L1 -2041 5767 5315 461 240 72 8 chr5 6255074 6255199 -196830333 - MLT1H LTR MaLR 0 549 417 960 169 47 42 chr5 6255252 6255465 -196830067 - MER20 DNA MER1_type -5 214 1 387 41 0 0 chr5 6256470 6256519 -196829013 + (TG)n Simple_repeat Simple_repeat 2 50 0 2206 157 8 38 chr5 6256728 6257123 -196828409 + MLT1B LTR MaLR 1 383 -7 208 279 19 67 chr5 6257687 6257791 -196827741 + L3b LINE CR1 1393 1491 -92 249 307 27 20 chr5 6259425 6259575 -196825957 - L1MC/D LINE L1 -1499 4647 4497 204 200 0 0 chr5 6260615 6260660 -196824872 + CT-rich Low_complexity Low_complexity 3 47 0 2266 113 3 0 chr5 6260683 6260992 -196824540 - AluSp SINE Alu -3 310 1 191 35 0 35 chr5 6261104 6261133 -196824399 + (TTTTTA)n Simple_repeat Simple_repeat 3 30 0 2198 115 0 7 chr5 6261142 6261438 -196824094 - AluSx SINE Alu -10 302 9 2047 121 3 50 chr5 6264175 6264497 -196821035 - AluSp SINE Alu -6 307 1 1053 221 174 43 chr5 6266266 6266704 -196818828 - MLT1D LTR MaLR -10 495 1 276 269 47 41 chr5 6266751 6266922 -196818610 + Charlie2 DNA MER1_type 413 584 -2278 401 229 95 56 chr5 6267083 6267262 -196818270 + Charlie2a DNA MER1_type 1496 1681 -1181 1647 233 113 53 chr5 6267462 6268246 -196817286 + Charlie2a DNA MER1_type 1807 2645 -217 705 240 88 0 chr5 6268246 6268417 -196817115 - MER5A DNA MER1_type -3 186 1 1647 233 113 53 chr5 6268417 6268461 -196817071 + Charlie2a DNA MER1_type 2645 2685 -177 196 154 39 0 chr5 6268503 6268555 -196816977 + (TAGA)n Simple_repeat Simple_repeat 3 56 0 2085 194 52 47 chr5 6269678 6270297 -196815235 - LTR29 LTR ERV1 0 622 1 2196 81 7 24 chr5 6270454 6270749 -196814783 + AluSp SINE Alu 1 290 -23 416 293 159 21 chr5 6270758 6271048 -196814484 - L1ME4a LINE L1 -50 6071 5742 308 250 18 27 chr5 6271059 6271171 -196814361 + CT-rich Low_complexity Low_complexity 2 112 0 2106 147 3 0 chr5 6271559 6271866 -196813666 + AluSq SINE Alu 1 308 -5 27 108 0 0 chr5 6272216 6272327 -196813205 + AT_rich Low_complexity Low_complexity 1 111 0 3537 144 30 16 chr5 6272863 6273040 -196812492 - L1MA5 LINE L1 0 6300 6127 847 200 42 0 chr5 6273040 6273205 -196812327 + FAM SINE Alu 1 172 -3 3537 144 30 16 chr5 6273205 6273694 -196811838 - L1MA5 LINE L1 -173 6127 5625 513 253 77 22 chr5 6273970 6274152 -196811380 + MER117 DNA MER1_type 3 194 -3 27 29 0 0 chr5 6274511 6274545 -196810987 + AT_rich Low_complexity Low_complexity 1 34 0 183 319 159 35 chr5 6275651 6275764 -196809768 - L2 LINE L2 -37 3235 3109 434 255 176 7 chr5 6275814 6275967 -196809565 - MER5A DNA MER1_type -7 182 4 198 0 0 0 chr5 6276173 6276195 -196809337 + (T)n Simple_repeat Simple_repeat 1 22 0 8770 197 37 67 chr5 6276358 6276663 -196808869 - L1MC3 LINE L1 -1 8063 7750 1934 123 3 34 chr5 6276663 6276956 -196808576 - AluSx SINE Alu -28 284 1 8770 197 37 67 chr5 6276956 6278771 -196806761 - L1MC3 LINE L1 -314 7750 5881 6391 94 17 6 chr5 6278771 6279714 -196805818 - L1PA10 LINE L1 0 6168 5221 561 220 0 9 chr5 6279715 6279824 -196805708 - AluJo SINE Alu -85 227 120 8770 197 37 67 chr5 6279824 6280303 -196805229 - L1MC3 LINE L1 -2183 5881 5389 4340 95 5 5 chr5 6280303 6280932 -196804600 - L1PA13 LINE L1 -3 6160 5532 8770 197 37 67 chr5 6280932 6281457 -196804075 - L1MC3 LINE L1 -2675 5389 4713 2502 194 14 42 chr5 6281461 6282013 -196803519 + L1 LINE L1 3734 4269 -1877 2417 108 0 0 chr5 6282013 6282320 -196803212 + AluSc SINE Alu 1 307 -2 2502 194 14 42 chr5 6282320 6282390 -196803142 + L1 LINE L1 4269 4339 -1807 740 218 16 0 chr5 6282388 6282576 -196802956 - L1MC3 LINE L1 -1491 4724 4534 * 212 59 29 0 chr5 6282588 6282622 -196802910 + (TA)n Simple_repeat Simple_repeat 2 36 0 825 237 93 13 chr5 6282635 6282935 -196802597 - L1MC3 LINE L1 -1749 4466 4143 468 327 36 6 chr5 6283104 6283272 -196802260 - MIR SINE MIR -57 205 33 32 95 0 0 chr5 6284105 6284200 -196801332 + AT_rich Low_complexity Low_complexity 1 95 0 16208 202 20 11 chr5 6284415 6287103 -196798429 - L1PA15 LINE L1 -3 6813 4059 2227 158 44 0 chr5 6287103 6287489 -196798043 - MER57A LTR ERV1 0 403 1 16208 202 20 11 chr5 6287489 6290040 -196795492 - L1PA15 LINE L1 -2757 4059 1532 206 326 35 23 chr5 6290552 6290638 -196794894 + L2 LINE L2 3177 3263 -9 382 308 87 36 chr5 6290703 6291037 -196794495 - L1MC3 LINE L1 -3873 2523 2173 446 254 16 32 chr5 6291946 6292072 -196793460 - MIR SINE MIR -21 241 118 785 222 166 88 chr5 6292251 6292783 -196792749 + MLT1E3 LTR MaLR 1 624 0 248 227 297 16 chr5 6292786 6292914 -196792618 + MIR SINE MIR 88 251 -11 1384 213 62 37 chr5 6293616 6294020 -196791512 - MLT1C LTR MaLR -6 461 41 21 82 0 0 chr5 6294351 6294400 -196791132 + AT_rich Low_complexity Low_complexity 1 49 0 405 342 53 30 chr5 6295141 6295442 -196790090 + MLT1I LTR MaLR 37 344 -65 474 277 61 19 chr5 6295450 6295663 -196789869 + MLT1H LTR MaLR 3 224 -325 309 191 40 91 chr5 6295731 6295908 -196789624 + MLT1H LTR MaLR 325 409 0 1347 247 130 61 chr5 6296569 6297137 -196788395 - MLT1E2 LTR MaLR 0 624 1 2448 53 0 47 chr5 6297352 6297672 -196787860 + AluY SINE Alu 1 305 -6 22 35 0 0 chr5 6297696 6297725 -196787807 + AT_rich Low_complexity Low_complexity 1 29 0 421 293 140 6 chr5 6299169 6299326 -196786206 + MER5A DNA MER1_type 9 186 -3 884 259 21 13 chr5 6299345 6299581 -196785951 + MIR SINE MIR 25 262 0 1799 171 53 8 chr5 6299810 6300184 -196785348 - L1MB2 LINE L1 -4 6167 5777 387 280 95 43 chr5 6300496 6300800 -196784732 - L1ME4a LINE L1 -41 6080 5761 297 321 0 0 chr5 6300861 6300967 -196784565 - L1ME4a LINE L1 -448 5673 5568 1126 216 53 104 chr5 6300972 6301403 -196784129 + MLT2B1 LTR ERVL 6 414 0 356 176 14 54 chr5 6301535 6301609 -196783923 - L2 LINE L2 -7 3306 3236 223 186 0 0 chr5 6301831 6301874 -196783658 + A-rich Low_complexity Low_complexity 1 43 0 398 297 57 31 chr5 6301902 6302094 -196783438 - L1ME4a LINE L1 -2355 5453 5257 333 257 0 73 chr5 6302148 6302257 -196783275 - L1ME4a LINE L1 -2444 5364 5264 828 257 13 29 chr5 6302458 6302970 -196782562 - L1ME2 LINE L1 -62 6102 5493 22 0 0 0 chr5 6303441 6303463 -196782069 + AT_rich Low_complexity Low_complexity 1 22 0 1946 176 8 8 chr5 6304034 6304409 -196781123 + L1MB3 LINE L1 5480 5854 -329 268 119 0 0 chr5 6304409 6304451 -196781081 + L1M3 LINE L1 5813 5854 -329 252 143 0 0 chr5 6304451 6304493 -196781039 + L1M3 LINE L1 5813 5854 -329 1673 191 14 11 chr5 6304493 6304860 -196780672 + L1MB3 LINE L1 5813 6180 -3 856 276 83 21 chr5 6305036 6305420 -196780112 - MLT1J2 LTR MaLR -2 448 41 494 272 166 34 chr5 6306801 6307066 -196778466 - L2 LINE L2 0 3313 3014 26 0 0 0 chr5 6307654 6307680 -196777852 + AT_rich Low_complexity Low_complexity 1 26 0 28 71 0 0 chr5 6309403 6309459 -196776073 + AT_rich Low_complexity Low_complexity 1 56 0 186 350 0 30 chr5 6310482 6310582 -196774950 + MIR3 SINE MIR 107 203 -5 310 276 65 65 chr5 6311757 6311971 -196773561 - MLT1K LTR MaLR -29 559 346 425 336 60 20 chr5 6312016 6312266 -196773266 - MLT1K LTR MaLR -326 262 3 396 329 121 22 chr5 6312335 6312566 -196772966 + MIR SINE MIR 9 262 0 328 314 59 46 chr5 6312588 6312894 -196772638 + L1M4 LINE L1 3523 3832 -2314 1216 279 63 64 chr5 6313018 6313624 -196771908 + L2 LINE L2 2170 2774 -540 378 266 319 35 chr5 6313766 6313988 -196771544 + L2 LINE L2 2941 3099 -214 3433 155 15 20 chr5 6313988 6314593 -196770939 + MER7C DNA MER2_type 1 602 0 378 266 319 35 chr5 6314593 6314652 -196770880 + L2 LINE L2 3099 3302 -11 494 207 21 7 chr5 6314659 6314804 -196770728 + GA-rich Low_complexity Low_complexity 1 147 0 5322 145 44 35 chr5 6317145 6318091 -196767441 + Tigger1 DNA MER2_type 1 955 -1463 16563 166 35 8 chr5 6318098 6324406 -196761126 + L1P5 LINE L1 23 6155 -712 239 0 32 0 chr5 6324406 6324437 -196761095 + (TA)n Simple_repeat Simple_repeat 1 32 0 216 0 0 0 chr5 6324436 6324460 -196761072 + (CA)n Simple_repeat Simple_repeat 2 25 0 * 16563 166 35 8 chr5 6324437 6324486 -196761046 + L1P5 LINE L1 6155 6534 -333 6969 139 18 22 chr5 6324491 6325638 -196759894 + Tigger1 DNA MER2_type 1276 2418 0 1475 243 0 7 chr5 6326185 6326473 -196759059 + AluJo SINE Alu 1 286 -26 705 186 81 59 chr5 6326586 6326779 -196758753 + MER20 DNA MER1_type 19 217 -2 22 35 0 0 chr5 6327659 6327688 -196757844 + AT_rich Low_complexity Low_complexity 1 29 0 892 182 18 0 chr5 6328792 6328962 -196756570 + L1MD2 LINE L1 6187 6359 0 447 19 0 0 chr5 6329549 6329601 -196755931 + (TAGA)n Simple_repeat Simple_repeat 2 53 0 1933 156 3 10 chr5 6331029 6331324 -196754208 + AluSx SINE Alu 1 293 -19 369 62 0 0 chr5 6331325 6331373 -196754159 + (TA)n Simple_repeat Simple_repeat 1 48 0 249 260 0 27 chr5 6331739 6331812 -196753720 - 7SK RNA RNA -120 73 3 2327 100 0 3 chr5 6332441 6332741 -196752791 - AluSx SINE Alu -13 299 1 286 200 0 0 chr5 6333641 6333696 -196751836 + MIR SINE MIR 113 167 -95 211 296 217 35 chr5 6333830 6334017 -196751515 + MIR3 SINE MIR 12 227 -35 2686 185 92 7 chr5 6334576 6335161 -196750371 + L1MB4 LINE L1 5541 6175 -5 246 32 0 0 chr5 6335529 6335560 -196749972 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 498 149 0 0 chr5 6335642 6335729 -196749803 + (T)n Simple_repeat Simple_repeat 1 87 0 2432 97 0 0 chr5 6336613 6336921 -196748611 - AluSq SINE Alu -4 309 2 502 295 136 30 chr5 6337242 6337581 -196747951 - L1ME LINE L1 -330 5791 5417 343 349 113 14 chr5 6338006 6338218 -196747314 - MIR SINE MIR -9 253 21 240 231 77 87 chr5 6338411 6338515 -196747017 - MIR SINE MIR -66 196 94 185 300 33 0 chr5 6338545 6338605 -196746927 + MIR SINE MIR 128 189 -73 993 123 54 74 chr5 6339312 6339515 -196746017 - MER20 DNA MER1_type -5 214 16 2260 103 3 7 chr5 6340839 6341141 -196744391 + AluSg SINE Alu 1 301 -9 326 296 74 81 chr5 6341295 6341974 -196743558 + L1ME4a LINE L1 5405 6078 -43 910 286 84 23 chr5 6342338 6342834 -196742698 + L2 LINE L2 2723 3253 -60 1540 53 5 0 chr5 6342975 6343165 -196742367 + AluY SINE Alu 116 306 -5 1510 180 92 30 chr5 6343397 6343797 -196741735 - MER69 DNA AcHobo -13 2513 2089 586 274 95 21 chr5 6344617 6345144 -196740388 - L1M4c LINE L1 -4069 2577 1926 1836 154 4 4 chr5 6345149 6345429 -196740103 - AluJb SINE Alu -19 293 14 1916 139 17 46 chr5 6345429 6345774 -196739758 - THE1B LTR MaLR 0 364 30 6684 205 25 100 chr5 6345810 6347859 -196737673 - L1M4c LINE L1 -4712 1934 5 504 32 0 0 chr5 6348070 6348132 -196737400 + (TG)n Simple_repeat Simple_repeat 1 62 0 600 263 53 13 chr5 6348196 6348348 -196737184 + MER5A DNA MER1_type 32 189 0 571 294 82 77 chr5 6348788 6349582 -196735950 - L1M4 LINE L1 -1322 4824 4027 23 33 0 0 chr5 6349752 6349782 -196735750 + AT_rich Low_complexity Low_complexity 1 30 0 557 280 116 57 chr5 6349965 6350543 -196734989 + L1MC4a LINE L1 5293 5904 -1904 428 279 38 25 chr5 6350933 6351091 -196734441 - LTR67 LTR ERVL -369 188 29 2282 112 0 0 chr5 6351348 6351643 -196733889 - AluSx SINE Alu -17 295 1 212 289 134 35 chr5 6351840 6351982 -196733550 - MIR3 SINE MIR -23 185 30 305 266 164 83 chr5 6352303 6352533 -196732999 + L2 LINE L2 2694 2904 -409 2512 195 74 55 chr5 6352533 6353076 -196732456 - MLT2B3 LTR ERVL 0 554 2 305 266 164 83 chr5 6353076 6353236 -196732296 + L2 LINE L2 2904 3116 -197 375 188 83 21 chr5 6355016 6355112 -196730420 + LTR16A1 LTR ERVL 5 106 -351 1956 158 78 45 chr5 6355157 6355375 -196730157 - MLT1B LTR MaLR -4 386 150 2243 115 3 0 chr5 6355375 6355680 -196729852 - AluSx SINE Alu -2 310 5 1956 158 78 45 chr5 6355680 6355835 -196729697 - MLT1B LTR MaLR -240 150 1 342 0 0 0 chr5 6355846 6355884 -196729648 + (T)n Simple_repeat Simple_repeat 1 38 0 2233 203 65 15 chr5 6356411 6356889 -196728643 + MLT1D LTR MaLR 1 502 -3 1156 199 5 23 chr5 6357159 6357380 -196728152 - MER58A DNA MER1_type -2 222 6 299 180 66 0 chr5 6358944 6359005 -196726527 + L1MA9 LINE L1 6243 6307 -5 24 53 0 0 chr5 6359307 6359345 -196726187 + AT_rich Low_complexity Low_complexity 1 38 0 1258 144 0 33 chr5 6359795 6360010 -196725522 + L1MA9 LINE L1 6100 6307 -5 330 293 14 21 chr5 6360456 6360596 -196724936 + GA-rich Low_complexity Low_complexity 3 141 0 253 286 0 0 chr5 6360774 6360851 -196724681 - L2 LINE L2 -2 3311 3235 238 246 15 0 chr5 6361632 6361697 -196723835 + L1MB4 LINE L1 6115 6180 0 2896 138 20 35 chr5 6362958 6363430 -196722102 + MER31A LTR ERV1 1 467 -18 1453 165 12 92 chr5 6363430 6363758 -196721774 - AluJo SINE Alu -10 302 1 2896 138 20 35 chr5 6363758 6363777 -196721755 + MER31A LTR ERV1 467 485 0 485 92 41 0 chr5 6363781 6363879 -196721653 + (TA)n Simple_repeat Simple_repeat 1 102 0 275 227 53 0 chr5 6363884 6363959 -196721573 + 7SK RNA RNA 15 93 -100 1715 241 165 44 chr5 6364834 6365461 -196720071 - L1ME3A LINE L1 -5 6165 5615 5344 78 0 0 chr5 6365461 6366124 -196719408 - L1PA8 LINE L1 -7 6165 5503 1715 241 165 44 chr5 6366124 6366765 -196718767 - L1ME3A LINE L1 -555 5615 4742 22 0 0 0 chr5 6366961 6366983 -196718549 + AT_rich Low_complexity Low_complexity 1 22 0 1814 157 17 0 chr5 6366989 6367114 -196718418 + AluJb SINE Alu 4 125 -187 2220 101 3 3 chr5 6367114 6367410 -196718122 + AluSc SINE Alu 1 296 -13 1814 157 17 0 chr5 6367410 6367571 -196717961 + AluJb SINE Alu 125 295 -17 2011 135 3 3 chr5 6368808 6369105 -196716427 - AluSq SINE Alu -15 298 2 586 267 85 6 chr5 6369715 6369891 -196715641 - MIR SINE MIR -55 207 18 20531 25 14 1 chr5 6370555 6373597 -196711935 + L1PA3 LINE L1 3100 6152 -3 247 293 49 12 chr5 6373783 6373865 -196711667 - MIR SINE MIR -91 117 33 1061 289 73 35 chr5 6374517 6375009 -196710523 + MLT1J LTR MaLR 1 511 0 2334 79 0 0 chr5 6376217 6376527 -196709005 - AluSc SINE Alu 0 310 1 891 193 37 6 chr5 6376530 6376691 -196708841 - FRAM SINE Alu -16 160 1 578 127 0 32 chr5 6377724 6377850 -196707682 + (TA)n Simple_repeat Simple_repeat 1 122 0 3218 110 0 5 chr5 6377909 6378266 -196707266 - L1PB1 LINE L1 -2 6149 5793 333 0 0 0 chr5 6378266 6378303 -196707229 + (TG)n Simple_repeat Simple_repeat 2 38 0 3218 110 0 5 chr5 6378303 6378389 -196707143 - L1PB1 LINE L1 -358 5793 5708 471 224 22 48 chr5 6378641 6378786 -196706746 + MIR SINE MIR 31 172 -36 244 203 0 127 chr5 6379078 6379108 -196706424 + MER46C DNA MER2_type 204 236 -102 1253 247 108 44 chr5 6379108 6379626 -196705906 - MLT1H1 LTR MaLR -4 551 1 244 203 0 127 chr5 6379626 6379674 -196705858 + MER46C DNA MER2_type 236 272 -66 1789 203 109 106 chr5 6379814 6379961 -196705571 - Charlie2 DNA MER1_type -33 2829 2684 8080 29 10 0 chr5 6379961 6381110 -196704422 - L1PA4 LINE L1 -3 6152 5000 1789 203 109 106 chr5 6381110 6381915 -196703617 - Charlie2 DNA MER1_type -178 2684 1874 198 250 21 0 chr5 6382390 6382438 -196703094 + L2 LINE L2 3265 3313 0 635 290 43 90 chr5 6382827 6383323 -196702209 + MLT1J2 LTR MaLR 1 442 -8 21 71 0 0 chr5 6383392 6383434 -196702098 + AT_rich Low_complexity Low_complexity 1 42 0 1741 184 10 0 chr5 6384473 6384772 -196700760 - AluJo SINE Alu -10 302 1 424 224 129 99 chr5 6384915 6385108 -196700424 - MLT1I LTR MaLR -23 386 181 1334 167 139 0 chr5 6385108 6385366 -196700166 - AluJb SINE Alu -18 294 1 424 224 129 99 chr5 6385366 6385444 -196700088 - MLT1I LTR MaLR -228 181 107 562 279 113 26 chr5 6387412 6387677 -196697855 - L2 LINE L2 -21 3292 3005 444 195 234 8 chr5 6387685 6387813 -196697719 + LTR52 LTR ERVL 1 157 -264 717 255 13 0 chr5 6387837 6387994 -196697538 + MER45A DNA AcHobo 19 177 -1 267 247 27 27 chr5 6388002 6388075 -196697457 + MER115 DNA AcHobo 477 549 -144 509 212 0 0 chr5 6388122 6388221 -196697311 - L1MD2 LINE L1 -21 6338 6240 407 221 110 8 chr5 6388224 6388351 -196697181 + Zaphod DNA AcHobo 3882 4021 -10 25 0 0 0 chr5 6388386 6388411 -196697121 + AT_rich Low_complexity Low_complexity 1 25 0 797 295 172 12 chr5 6388415 6388839 -196696693 + L2 LINE L2 1811 2302 -1012 23 0 0 0 chr5 6389155 6389178 -196696354 + AT_rich Low_complexity Low_complexity 1 23 0 198 333 20 0 chr5 6389900 6389951 -196695581 + MER5A DNA MER1_type 73 124 -65 1521 174 30 0 chr5 6390146 6390411 -196695121 - MER2 DNA MER2_type -72 273 1 453 293 135 83 chr5 6390451 6390781 -196694751 - L1ME4a LINE L1 -195 5926 5551 2365 61 0 0 chr5 6390781 6391106 -196694426 - AluY SINE Alu 0 325 1 453 293 135 83 chr5 6391106 6391361 -196694171 - L1ME4a LINE L1 -570 5551 5310 3112 74 13 2 chr5 6391363 6391756 -196693776 - L1PA13 LINE L1 0 6163 5767 1388 189 79 4 chr5 6392231 6392496 -196693036 + AluJb SINE Alu 9 293 -19 475 231 106 60 chr5 6393023 6393305 -196692227 + L1MEd LINE L1 31 325 -5794 391 283 167 24 chr5 6393562 6393855 -196691677 + L1MEd LINE L1 635 969 -5150 293 308 97 44 chr5 6394306 6394533 -196690999 + MLT1J LTR MaLR 143 381 -130 2007 129 57 48 chr5 6395527 6395899 -196689633 + THE1C LTR MaLR 1 375 0 509 279 191 38 chr5 6396307 6396647 -196688885 + MLT1J LTR MaLR 7 398 -113 624 62 0 0 chr5 6396658 6396739 -196688793 + (TTCTCC)n Simple_repeat Simple_repeat 1 81 0 396 0 0 0 chr5 6396747 6396791 -196688741 + (CA)n Simple_repeat Simple_repeat 2 45 0 497 278 32 27 chr5 6396860 6397047 -196688485 + MIR3 SINE MIR 8 195 -13 25 0 0 0 chr5 6397337 6397362 -196688170 + AT_rich Low_complexity Low_complexity 1 25 0 882 214 27 16 chr5 6398198 6398385 -196687147 + MER5A DNA MER1_type 1 189 0 554 157 90 2 chr5 6398393 6398565 -196686967 + MER58A DNA MER1_type 1 221 -3 668 310 21 8 chr5 6398590 6398832 -196686700 + MIR SINE MIR 15 259 -3 356 296 29 52 chr5 6399768 6399940 -196685592 - MER5B DNA MER1_type 0 178 22 841 368 124 7 chr5 6400354 6401169 -196684363 + L2 LINE L2 924 1833 -1481 386 289 100 54 chr5 6401512 6402613 -196682919 - L1ME LINE L1 -547 5617 4442 394 266 90 34 chr5 6402848 6403081 -196682451 - L1ME LINE L1 -2085 4061 3816 714 203 8 8 chr5 6403162 6403295 -196682237 + MLT1A1 LTR MaLR 233 365 0 8304 198 57 31 chr5 6403295 6404987 -196680545 + MLT1A1-int LTR MaLR 1 1735 0 1651 165 18 107 chr5 6404987 6405388 -196680144 + MLT1A1 LTR MaLR 1 365 0 288 368 56 52 chr5 6405514 6405783 -196679749 + L2 LINE L2 2968 3237 -35 611 275 58 116 chr5 6405925 6406151 -196679381 - MLT1J LTR MaLR -3 508 315 2202 123 0 0 chr5 6406151 6406452 -196679080 - AluSx SINE Alu -11 301 1 611 275 58 116 chr5 6406452 6406639 -196678893 - MLT1J LTR MaLR -196 315 119 198 320 0 0 chr5 6409318 6409368 -196676164 - MIR SINE MIR -72 136 87 180 0 0 0 chr5 6411555 6411575 -196673957 + (GGA)n Simple_repeat Simple_repeat 1 20 0 336 285 86 106 chr5 6412256 6412350 -196673182 - L1M2 LINE L1 -5520 1329 1235 216 0 0 0 chr5 6412350 6412374 -196673158 + (CCGCG)n Simple_repeat Simple_repeat 1 24 0 336 285 86 106 chr5 6412374 6412721 -196672811 - L1M2 LINE L1 -5614 1235 897 180 0 0 0 chr5 6417023 6417043 -196668489 + (CAAAA)n Simple_repeat Simple_repeat 2 21 0 2204 95 3 29 chr5 6417270 6417585 -196667947 - AluY SINE Alu -4 307 1 351 233 38 60 chr5 6417637 6417770 -196667762 + L2 LINE L2 3184 3313 0 475 204 0 0 chr5 6418112 6418200 -196667332 + Tigger4(Zombi) DNA MER2_type 1 88 -2643 * 656 122 2 2 chr5 6418189 6418296 -196667236 + Tigger4(Zombi) DNA MER2_type 2625 2731 0 1833 202 26 19 chr5 6418531 6418952 -196666580 + L1MB8 LINE L1 5754 6177 -1 2301 116 0 0 chr5 6421261 6421563 -196663969 - AluSx SINE Alu -10 302 1 995 82 48 0 chr5 6423170 6423316 -196662216 + MER41A LTR ERV1 402 554 0 2224 85 0 69 chr5 6425305 6425623 -196659909 + AluSx SINE Alu 1 296 -16 188 402 51 8 chr5 6425855 6425972 -196659560 - L3b LINE CR1 -7 1576 1455 205 400 9 0 chr5 6426083 6426193 -196659339 - L2 LINE L2 -17 3255 3145 207 185 0 108 chr5 6427048 6427113 -196658419 - MER5B DNA MER1_type -109 69 12 23 54 0 0 chr5 6427394 6427431 -196658101 + AT_rich Low_complexity Low_complexity 1 37 0 22 35 0 0 chr5 6428353 6428382 -196657150 + AT_rich Low_complexity Low_complexity 1 29 0 418 271 133 18 chr5 6429088 6429254 -196656278 - MLT1H1 LTR MaLR 0 555 371 385 268 75 10 chr5 6429291 6429501 -196656031 - MLT1G1 LTR MaLR -374 181 2 698 256 81 20 chr5 6430006 6430252 -196655280 + MIR SINE MIR 2 262 0 241 281 91 18 chr5 6430598 6430934 -196654598 + LTR33 LTR ERVL 83 512 -9 314 128 21 0 chr5 6432277 6432324 -196653208 - MLT1C LTR MaLR -77 390 343 1071 246 18 0 chr5 6432606 6432826 -196652706 - MER58A DNA MER1_type 0 224 1 429 145 0 0 chr5 6432829 6432898 -196652634 - MER116 DNA Mariner -6 74 6 1364 225 61 48 chr5 6433246 6433589 -196651943 - MLT1C LTR MaLR 0 467 115 1958 145 148 19 chr5 6433589 6433968 -196651564 - MSTA LTR MaLR 0 428 1 1364 225 61 48 chr5 6433968 6434082 -196651450 - MLT1C LTR MaLR -352 115 4 2117 112 20 3 chr5 6435320 6435616 -196649916 - AluSq SINE Alu -8 305 5 2225 123 0 0 chr5 6436483 6436792 -196648740 - AluSx SINE Alu -3 309 1 2215 226 29 6 chr5 6436799 6437320 -196648212 - L1MC3 LINE L1 -19 7766 7234 365 303 76 0 chr5 6437587 6437732 -196647800 + L2 LINE L2 3156 3311 -2 21 0 0 0 chr5 6440307 6440328 -196645204 + AT_rich Low_complexity Low_complexity 1 21 0 470 215 54 0 chr5 6440459 6440552 -196644980 - MER5A DNA MER1_type -85 104 7 260 172 46 0 chr5 6442073 6442160 -196643372 + (TG)n Simple_repeat Simple_repeat 1 91 0 261 235 286 25 chr5 6442195 6442314 -196643218 + L2 LINE L2 3123 3272 0 1767 197 33 0 chr5 6443012 6443342 -196642190 + MER47B DNA MER2_type 2 342 -76 2090 161 24 0 chr5 6443600 6443936 -196641596 - MER2 DNA MER2_type 0 344 1 2081 193 19 61 chr5 6443977 6444500 -196641032 + MLT1D LTR MaLR 1 501 -4 252 0 0 0 chr5 6445294 6445322 -196640210 + (TA)n Simple_repeat Simple_repeat 2 29 0 266 359 36 36 chr5 6445862 6446057 -196639475 + MIR SINE MIR 20 214 -48 981 143 65 32 chr5 6446539 6446755 -196638777 - L1MA8 LINE L1 -1 6290 6068 229 224 45 15 chr5 6447973 6448040 -196637492 - MER116 DNA Mariner -6 74 6 209 387 0 0 chr5 6448076 6448151 -196637381 + L2 LINE L2 3239 3313 0 459 308 137 12 chr5 6448259 6448587 -196636945 + L2 LINE L2 2945 3313 0 2342 84 0 0 chr5 6448802 6449117 -196636415 + AluSq SINE Alu 1 315 0 227 287 77 107 chr5 6449507 6449807 -196635725 - L2 LINE L2 -49 3223 2933 2540 71 0 0 chr5 6450346 6450656 -196634876 - AluY SINE Alu -1 310 1 21 0 0 0 chr5 6453019 6453040 -196632492 + AT_rich Low_complexity Low_complexity 1 21 0 244 379 107 22 chr5 6453641 6454005 -196631527 + L2 LINE L2 2919 3313 0 2409 85 7 0 chr5 6454140 6454445 -196631087 - AluSg SINE Alu -3 307 1 21 0 0 0 chr5 6454743 6454764 -196630768 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr5 6456254 6456277 -196629255 + AT_rich Low_complexity Low_complexity 1 23 0 204 211 0 0 chr5 6456969 6457007 -196628525 + (CA)n Simple_repeat Simple_repeat 1 38 0 521 209 0 0 chr5 6457658 6457768 -196627764 + MER53 DNA DNA 71 180 -9 183 275 43 29 chr5 6458826 6458895 -196626637 - L2 LINE L2 -84 3229 3160 660 247 60 47 chr5 6460105 6460340 -196625192 - MER74A LTR ERVL -310 248 11 672 222 60 0 chr5 6460629 6460796 -196624736 + MIR SINE MIR 64 240 -22 2095 118 3 7 chr5 6462034 6462321 -196623211 + AluSx SINE Alu 1 286 -26 426 231 110 99 chr5 6462350 6462532 -196623000 - L2 LINE L2 -22 3291 3108 305 243 87 0 chr5 6462783 6462886 -196622646 + L2 LINE L2 3196 3307 -6 21 0 0 0 chr5 6463381 6463402 -196622130 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr5 6464195 6464216 -196621316 + AT_rich Low_complexity Low_complexity 1 21 0 31 0 0 0 chr5 6464345 6464376 -196621156 + AT_rich Low_complexity Low_complexity 1 31 0 27 29 0 0 chr5 6464878 6464912 -196620620 + AT_rich Low_complexity Low_complexity 1 34 0 378 238 24 0 chr5 6465051 6465177 -196620355 + (TA)n Simple_repeat Simple_repeat 2 130 0 3371 152 9 0 chr5 6465184 6465717 -196619815 - L1MC1 LINE L1 -8 6325 5788 274 309 21 0 chr5 6465994 6466091 -196619441 + MIR SINE MIR 56 154 -108 349 310 76 38 chr5 6466152 6466336 -196619196 + L2 LINE L2 3123 3313 0 1559 115 17 0 chr5 6466944 6467178 -196618354 - L1MC1 LINE L1 -149 6184 5947 24 0 0 0 chr5 6467905 6467929 -196617603 + AT_rich Low_complexity Low_complexity 1 24 0 704 241 32 27 chr5 6470928 6471148 -196614384 + MIR SINE MIR 31 251 -11 523 319 103 67 chr5 6471294 6471904 -196613628 - HAL1 LINE L1 -760 1747 1160 219 69 0 0 chr5 6471904 6471933 -196613599 + (TTTA)n Simple_repeat Simple_repeat 2 30 0 3037 115 2 9 chr5 6471933 6472367 -196613165 - L1PA8 LINE L1 -10 6162 5732 523 319 103 67 chr5 6472367 6472588 -196612944 - HAL1 LINE L1 -1346 1161 885 554 178 9 146 chr5 6473238 6473457 -196612075 - MER53 DNA DNA 0 189 1 243 314 11 38 chr5 6475064 6475249 -196610283 + GA-rich Low_complexity Low_complexity 1 180 0 770 263 52 0 chr5 6475629 6475823 -196609709 - MER63A DNA MER1_type -6 204 1 2233 118 3 10 chr5 6477133 6477446 -196608086 + AluSx SINE Alu 1 311 -1 860 224 29 24 chr5 6478150 6478360 -196607172 + MER20 DNA MER1_type 1 211 -8 210 211 307 26 chr5 6478751 6478865 -196606667 - MIR SINE MIR 0 262 117 873 192 12 35 chr5 6478964 6479136 -196606396 - AluJo SINE Alu -2 310 143 1714 143 105 46 chr5 6479139 6479490 -196606042 - THE1C LTR MaLR -3 372 1 9526 135 40 44 chr5 6479490 6481072 -196604460 - THE1C-int LTR MaLR -1 1579 3 1224 208 94 29 chr5 6481091 6481433 -196604099 - THE1C LTR MaLR -9 366 3 755 185 0 55 chr5 6481434 6481580 -196603952 - AluJo SINE Alu -164 148 11 386 174 130 11 chr5 6481925 6482017 -196603515 + L1MC/D LINE L1 5375 5477 -2331 248 356 20 0 chr5 6482569 6482670 -196602862 - L2 LINE L2 -17 3255 3153 1906 125 45 3 chr5 6483152 6483440 -196602092 + AluSx SINE Alu 4 303 -9 186 189 0 0 chr5 6484756 6484793 -196600739 + CT-rich Low_complexity Low_complexity 3 39 0 22 0 0 0 chr5 6485238 6485260 -196600272 + AT_rich Low_complexity Low_complexity 1 22 0 266 91 0 0 chr5 6485260 6485304 -196600228 - L1PA3 LINE L1 0 6155 6112 292 293 97 27 chr5 6485355 6485655 -196599877 + L1ME4a LINE L1 5743 6063 -58 1042 17 0 0 chr5 6486264 6486380 -196599152 + L1PA4 LINE L1 6034 6149 -6 796 320 33 27 chr5 6487475 6487812 -196597720 - MLT1I LTR MaLR 0 409 71 225 294 209 35 chr5 6488310 6488511 -196597021 - MIR SINE MIR -12 250 15 295 304 36 9 chr5 6488754 6488866 -196596666 + MIR SINE MIR 34 148 -114 2210 96 0 0 chr5 6489075 6489385 -196596147 + AluSg SINE Alu 1 310 0 272 158 129 109 chr5 6490339 6490440 -196595092 + MIR SINE MIR 84 186 -76 2242 105 0 3 chr5 6490970 6491265 -196594267 + AluSg SINE Alu 1 294 -16 1575 39 0 0 chr5 6492003 6492181 -196593351 - L1PA4 LINE L1 -3 6152 5975 1087 224 72 36 chr5 6492620 6492951 -196592581 + MER2 DNA MER2_type 2 344 0 282 228 81 87 chr5 6493143 6493292 -196592240 + MER5A DNA MER1_type 18 165 -24 * 301 284 97 30 chr5 6493173 6493307 -196592225 - MER5A DNA MER1_type -29 160 18 23 33 0 0 chr5 6493848 6493878 -196591654 + AT_rich Low_complexity Low_complexity 1 30 0 1119 203 14 27 chr5 6494174 6494396 -196591136 + MER20 DNA MER1_type 1 219 0 5580 114 10 2 chr5 6495387 6496212 -196589320 - L1PA13 LINE L1 0 6163 5333 24 85 0 0 chr5 6497870 6497929 -196587603 + AT_rich Low_complexity Low_complexity 1 59 0 23 33 0 0 chr5 6498508 6498538 -196586994 + AT_rich Low_complexity Low_complexity 1 30 0 25 0 0 0 chr5 6498569 6498594 -196586938 + AT_rich Low_complexity Low_complexity 1 25 0 1751 233 99 42 chr5 6498632 6499185 -196586347 - MLT1E LTR MaLR -2 591 7 2631 46 0 0 chr5 6500175 6500481 -196585051 + AluY SINE Alu 1 306 -5 202 306 35 12 chr5 6500715 6500800 -196584732 - MIR3 SINE MIR -19 189 103 2193 95 0 3 chr5 6502826 6503156 -196582376 + AluY SINE Alu 1 329 0 3344 203 23 5 chr5 6504605 6505225 -196580307 + MER82 DNA MER2_type 23 653 0 4838 97 14 0 chr5 6508792 6509421 -196576111 - L1PA11 LINE L1 0 6174 5537 262 221 23 107 chr5 6509665 6509796 -196575736 + L3 LINE CR1 769 888 -689 181 242 0 0 chr5 6509956 6509989 -196575543 - MIR SINE MIR -24 238 206 25 75 0 0 chr5 6511571 6511624 -196573908 + AT_rich Low_complexity Low_complexity 1 53 0 2481 62 0 0 chr5 6512706 6512997 -196572535 - AluY SINE Alu -20 291 1 3645 116 0 15 chr5 6513673 6514199 -196571333 + L1PB1 LINE L1 5634 6151 0 26 30 0 0 chr5 6514199 6514232 -196571300 + AT_rich Low_complexity Low_complexity 1 33 0 483 267 45 11 chr5 6514699 6514875 -196570657 + L1MA9 LINE L1 6101 6282 -30 204 234 47 16 chr5 6514994 6515058 -196570474 + CT-rich Low_complexity Low_complexity 1 66 0 1697 238 118 19 chr5 6515812 6516295 -196569237 - MER77 LTR ERV1 -21 584 54 2267 118 16 0 chr5 6520734 6521040 -196564492 + AluSx SINE Alu 1 311 -1 594 249 62 8 chr5 6522176 6522363 -196563169 - MIR SINE MIR -19 243 42 857 209 73 0 chr5 6522521 6522712 -196562820 - MER58A DNA MER1_type 0 224 20 27 29 0 0 chr5 6523927 6523961 -196561571 + AT_rich Low_complexity Low_complexity 1 34 0 230 289 106 22 chr5 6524101 6524281 -196561251 - L1ME LINE L1 -199 5922 5728 26 30 0 0 chr5 6524657 6524690 -196560842 + AT_rich Low_complexity Low_complexity 1 33 0 214 206 29 0 chr5 6524753 6524821 -196560711 + GA-rich Low_complexity Low_complexity 1 70 0 2789 283 73 44 chr5 6527329 6529038 -196556494 + L2 LINE L2 1559 3310 -3 280 288 81 119 chr5 6529227 6529512 -196556020 + L2 LINE L2 2998 3271 -1 24 32 0 0 chr5 6529628 6529659 -196555873 + AT_rich Low_complexity Low_complexity 1 31 0 423 56 0 0 chr5 6530200 6530254 -196555278 + (TAGA)n Simple_repeat Simple_repeat 3 56 0 308 164 15 0 chr5 6530258 6530325 -196555207 + (TA)n Simple_repeat Simple_repeat 1 68 0 1960 136 4 0 chr5 6531057 6531336 -196554196 - AluSg SINE Alu -30 280 1 2136 62 44 0 chr5 6531887 6532221 -196553311 - AluY SINE Alu 0 346 1 444 237 142 24 chr5 6532317 6532486 -196553046 - MIR SINE MIR -11 251 63 360 254 53 95 chr5 6532999 6533188 -196552344 - L2 LINE L2 -25 3288 3108 935 305 63 50 chr5 6533226 6533889 -196551643 - L2 LINE L2 -433 2881 2210 373 313 78 28 chr5 6536433 6536859 -196548673 + L1ME LINE L1 5218 5664 -502 2101 128 0 13 chr5 6537338 6537643 -196547889 - AluSg SINE Alu -8 302 2 206 278 0 0 chr5 6537949 6538003 -196547529 + MIR SINE MIR 85 138 -124 1417 262 16 26 chr5 6539000 6539507 -196546025 + L1 LINE L1 2641 3142 -3004 1442 214 16 46 chr5 6539943 6540099 -196545433 + MLT1A1 LTR MaLR 1 160 -205 2464 57 0 7 chr5 6540099 6540400 -196545132 + AluY SINE Alu 1 299 -12 1442 214 16 46 chr5 6540400 6540613 -196544919 + MLT1A1 LTR MaLR 160 359 -6 848 200 56 37 chr5 6541457 6541672 -196543860 - MER20 DNA MER1_type 0 219 1 22 0 0 0 chr5 6542413 6542435 -196543097 + AT_rich Low_complexity Low_complexity 1 22 0 496 314 101 5 chr5 6543428 6543635 -196541897 - MIR SINE MIR -11 251 25 1879 167 5 32 chr5 6545470 6545841 -196539691 + MER46B DNA MER2_type 1 236 0 2851 3 0 0 chr5 6546408 6546714 -196538818 - AluYa5 SINE Alu -5 306 1 21 0 0 0 chr5 6547373 6547394 -196538138 + AT_rich Low_complexity Low_complexity 1 21 0 1851 130 3 7 chr5 6547526 6547819 -196537713 - L1PA8A LINE L1 0 6131 5840 183 265 120 34 chr5 6548653 6548770 -196536762 - MIR SINE MIR -71 191 65 358 280 19 28 chr5 6549258 6549365 -196536167 + MIR SINE MIR 36 141 -67 661 263 122 10 chr5 6549594 6549799 -196535733 + MIR SINE MIR 13 240 -22 559 234 3 6 chr5 6550156 6550511 -196535021 + (TGG)n Simple_repeat Simple_repeat 1 353 0 2236 285 63 34 chr5 6550611 6551982 -196533550 + L2 LINE L2 1907 3310 -3 280 288 81 119 chr5 6552171 6552456 -196533076 + L2 LINE L2 2998 3271 -1 24 32 0 0 chr5 6552572 6552603 -196532929 + AT_rich Low_complexity Low_complexity 1 31 0 423 56 0 0 chr5 6553145 6553199 -196532333 + (TAGA)n Simple_repeat Simple_repeat 3 56 0 299 167 15 0 chr5 6553204 6553270 -196532262 + (TA)n Simple_repeat Simple_repeat 2 68 0 1960 136 4 0 chr5 6554002 6554281 -196531251 - AluSg SINE Alu -30 280 1 2136 62 44 0 chr5 6554833 6555167 -196530365 - AluY SINE Alu 0 346 1 444 237 142 24 chr5 6555263 6555432 -196530100 - MIR SINE MIR -11 251 63 360 254 53 95 chr5 6555945 6556134 -196529398 - L2 LINE L2 -25 3288 3108 935 305 63 50 chr5 6556172 6556835 -196528697 - L2 LINE L2 -433 2881 2210 373 313 78 28 chr5 6559378 6559804 -196525728 + L1ME LINE L1 5218 5664 -502 2031 79 4 8 chr5 6560283 6560550 -196524982 - AluYa5 SINE Alu -8 303 38 24 32 0 0 chr5 6560646 6560677 -196524855 + AT_rich Low_complexity Low_complexity 1 31 0 216 316 61 10 chr5 6562167 6562265 -196523267 + MIR SINE MIR 32 134 -128 339 333 23 0 chr5 6563199 6563328 -196522204 + MIR SINE MIR 39 170 -92 2017 121 7 7 chr5 6563731 6564020 -196521512 - AluSx SINE Alu -23 289 1 267 357 25 19 chr5 6565350 6565507 -196520025 + MIR SINE MIR 90 247 -15 516 229 52 104 chr5 6566754 6566985 -196518547 - MER20 DNA MER1_type 0 219 1 267 357 25 19 chr5 6568742 6568899 -196516633 - MIR SINE MIR -15 247 90 2122 120 3 0 chr5 6570233 6570517 -196515015 + AluSx SINE Alu 1 317 0 268 31 0 0 chr5 6570517 6570549 -196514983 + (CAAA)n Simple_repeat Simple_repeat 2 52 0 339 333 23 0 chr5 6570920 6571049 -196514483 - MIR SINE MIR -92 170 39 216 316 61 10 chr5 6572044 6572142 -196513390 - MIR SINE MIR -128 134 32 24 32 0 0 chr5 6573632 6573663 -196511869 + AT_rich Low_complexity Low_complexity 1 31 0 28 29 0 0 chr5 6573866 6573901 -196511631 + AT_rich Low_complexity Low_complexity 1 35 0 2954 72 0 5 chr5 6573919 6574308 -196511224 - L1PA8 LINE L1 -2 6170 5784 2560 175 24 42 chr5 6574609 6575186 -196510346 - L1MB7 LINE L1 0 6184 5618 647 206 217 0 chr5 6576748 6576923 -196508609 - MIR SINE MIR -5 257 45 205 323 0 32 chr5 6576957 6577081 -196508451 + (TATG)n Simple_repeat Simple_repeat 4 123 0 * 232 281 0 0 chr5 6577018 6577082 -196508450 + (TG)n Simple_repeat Simple_repeat 1 64 0 1270 257 54 28 chr5 6577339 6577873 -196507659 - MER74B LTR ERVL -6 616 69 288 0 0 0 chr5 6577977 6578009 -196507523 + (TG)n Simple_repeat Simple_repeat 1 32 0 28 29 0 0 chr5 6579198 6579233 -196506299 + AT_rich Low_complexity Low_complexity 1 35 0 191 309 73 109 chr5 6579695 6580025 -196505507 - L2 LINE L2 -5 3267 2950 359 241 68 2 chr5 6580259 6580467 -196505065 - L1ME3A LINE L1 -285 5885 5647 444 254 273 5 chr5 6580613 6580818 -196504714 - MIR SINE MIR -1 261 2 240 244 98 12 chr5 6581514 6581596 -196503936 - L2 LINE L2 -36 3277 3189 294 284 77 0 chr5 6581668 6581823 -196503709 + HERVL74 LTR ERVL 1768 1934 -3751 243 159 0 0 chr5 6581856 6581900 -196503632 - L1MA9 LINE L1 -39 6273 6230 286 322 103 21 chr5 6582005 6582247 -196503285 - L2 LINE L2 -164 3149 2888 614 315 136 33 chr5 6582289 6582927 -196502605 - L2 LINE L2 -430 2884 2181 216 286 26 26 chr5 6583294 6583371 -196502161 + MIR SINE MIR 107 183 -79 2483 80 0 0 chr5 6585331 6585642 -196499890 - AluY SINE Alu 0 311 1 207 100 0 0 chr5 6585763 6585793 -196499739 + (T)n Simple_repeat Simple_repeat 1 30 0 202 279 58 58 chr5 6587204 6587308 -196498224 + MIR3 SINE MIR 105 208 0 2364 98 0 16 chr5 6588160 6588467 -196497065 + AluSg SINE Alu 1 302 -8 200 211 0 0 chr5 6589479 6589517 -196496015 + (TATG)n Simple_repeat Simple_repeat 3 40 0 180 0 0 0 chr5 6589517 6589537 -196495995 + (TCTG)n Simple_repeat Simple_repeat 1 20 0 1378 22 0 22 chr5 6589537 6589721 -196495811 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 570 187 187 28 chr5 6589724 6589906 -196495626 + MER20 DNA MER1_type 1 211 -8 1703 199 0 13 chr5 6591929 6592236 -196493296 - AluJo SINE Alu -9 303 1 468 0 0 0 chr5 6592267 6592319 -196493213 + (CA)n Simple_repeat Simple_repeat 1 52 0 917 260 22 30 chr5 6592447 6592910 -196492622 - MLT1H1 LTR MaLR -34 521 4 197 379 97 0 chr5 6594943 6595046 -196490486 - L2 LINE L2 0 3272 3160 1511 232 55 110 chr5 6595188 6596404 -196489128 - L1MC5 LINE L1 -64 7897 6749 338 325 118 19 chr5 6596432 6596644 -196488888 - L1MC4a LINE L1 -1162 6646 6414 1051 314 26 30 chr5 6596996 6597563 -196487969 - L1MC4a LINE L1 -1846 5962 5398 187 341 110 0 chr5 6597566 6597648 -196487884 - L2 LINE L2 -9 3263 3173 229 186 0 0 chr5 6598510 6598553 -196486979 - MER81 DNA DNA -1 113 71 1630 233 29 16 chr5 6598614 6599060 -196486472 - MLT1C LTR MaLR 0 467 16 315 0 0 0 chr5 6599604 6599639 -196485893 + (CA)n Simple_repeat Simple_repeat 1 35 0 25 51 0 0 chr5 6603030 6603069 -196482463 + AT_rich Low_complexity Low_complexity 1 39 0 604 305 40 22 chr5 6604162 6604388 -196481144 - L2 LINE L2 -8 3305 3076 1270 242 49 20 chr5 6604511 6605003 -196480529 + L1ME1 LINE L1 4743 5248 -898 227 154 218 26 chr5 6605054 6605132 -196480400 + L1ME1 LINE L1 5254 5346 -828 2101 243 40 29 chr5 6605137 6605862 -196479670 + L1ME1 LINE L1 5430 6162 -4 2132 177 57 7 chr5 6606157 6606563 -196478969 - MSTB LTR MaLR 0 426 1 715 202 50 15 chr5 6606958 6607156 -196478376 + MER3 DNA MER1_type 1 205 -4 260 373 40 17 chr5 6607283 6607460 -196478072 + MIR3 SINE MIR 21 201 -7 2396 77 0 0 chr5 6607574 6607872 -196477660 + AluY SINE Alu 1 298 -13 287 293 99 5 chr5 6608205 6608417 -196477115 - MLT1L LTR MaLR -17 598 367 1500 194 89 23 chr5 6608648 6609039 -196476493 - MER96B DNA MER1_type 0 417 1 2228 97 3 0 chr5 6612946 6613244 -196472288 - AluSq SINE Alu -14 299 1 313 333 54 42 chr5 6614894 6615098 -196470434 - MIR SINE MIR -48 214 8 226 324 103 80 chr5 6615605 6615917 -196469615 - L2 LINE L2 0 3272 2954 432 338 118 12 chr5 6618487 6618886 -196466646 + L2 LINE L2 2152 2592 -722 441 161 136 0 chr5 6619080 6619210 -196466322 + MER58B DNA MER1_type 181 337 -4 413 315 170 16 chr5 6619211 6619672 -196465860 + L2 LINE L2 2752 3285 -28 1262 70 13 0 chr5 6620834 6621139 -196464393 + (TTTCC)n Simple_repeat Simple_repeat 1 490 0 1058 195 47 9 chr5 6621233 6621448 -196464084 - MER58A DNA MER1_type 0 224 2 958 170 0 0 chr5 6621625 6621766 -196463766 + AluJo SINE Alu 1 141 -171 338 108 15 0 chr5 6621783 6621848 -196463684 + (TAGA)n Simple_repeat Simple_repeat 1 66 0 27 0 0 0 chr5 6621849 6621876 -196463656 + AT_rich Low_complexity Low_complexity 1 27 0 2400 227 6 52 chr5 6623213 6623842 -196461690 - MER77 LTR ERV1 0 605 6 289 160 266 11 chr5 6624100 6624194 -196461338 + MER33 DNA MER1_type 2 119 -205 1986 134 0 7 chr5 6624240 6624561 -196460971 - AluSx SINE Alu 0 319 1 321 254 0 0 chr5 6624574 6624645 -196460887 + MER33 DNA MER1_type 293 363 0 263 284 71 55 chr5 6624718 6624845 -196460687 + L2 LINE L2 3167 3295 -18 22 35 0 0 chr5 6627104 6627133 -196458399 + AT_rich Low_complexity Low_complexity 1 29 0 314 260 21 21 chr5 6627238 6627334 -196458198 - L1MC4 LINE L1 -1333 6709 6614 400 257 9 9 chr5 6627341 6627446 -196458086 - LTR28 LTR ERV1 0 1020 916 1051 249 114 79 chr5 6627495 6628253 -196457279 - LTR1B LTR ERV1 -37 983 1 398 237 45 13 chr5 6628253 6628409 -196457123 + (TA)n Simple_repeat Simple_repeat 1 161 0 364 278 295 0 chr5 6631267 6631440 -196454092 + MIR SINE MIR 1 224 -38 180 216 0 0 chr5 6632047 6632098 -196453434 + T-rich Low_complexity Low_complexity 1 51 0 280 0 50 0 chr5 6632492 6632532 -196453000 + (TA)n Simple_repeat Simple_repeat 1 42 0 399 73 0 0 chr5 6632946 6633001 -196452531 + (TG)n Simple_repeat Simple_repeat 1 55 0 259 207 0 35 chr5 6634541 6634599 -196450933 + CT-rich Low_complexity Low_complexity 3 58 0 26 50 0 0 chr5 6636317 6636357 -196449175 + AT_rich Low_complexity Low_complexity 1 40 0 785 275 42 21 chr5 6636656 6636896 -196448636 - MIR SINE MIR -10 252 8 456 155 10 10 chr5 6639299 6639396 -196446136 + MER53 DNA DNA 1 97 -92 196 275 0 0 chr5 6639436 6639476 -196446056 + L2 LINE L2 3256 3295 -18 225 338 104 19 chr5 6639503 6639657 -196445875 + MIR SINE MIR 77 243 -19 1310 197 29 65 chr5 6642394 6642779 -196442753 - MER93b LTR ERV1 -2 371 1 186 227 239 23 chr5 6643569 6643657 -196441875 + MER5A DNA MER1_type 40 146 -43 271 0 51 0 chr5 6643719 6643758 -196441774 + (CAAAAA)n Simple_repeat Simple_repeat 2 42 0 2229 47 0 0 chr5 6643772 6644030 -196441502 - AluY SINE Alu -14 297 40 999 174 46 0 chr5 6644222 6644418 -196441114 - MER2 DNA MER2_type -135 210 6 244 281 31 0 chr5 6644630 6644694 -196440838 - L2 LINE L2 -14 3299 3234 634 222 119 0 chr5 6644732 6644908 -196440624 + MER58A DNA MER1_type 1 197 -27 223 315 44 66 chr5 6645271 6645387 -196440145 + MER5A DNA MER1_type 1 127 -62 2088 112 10 27 chr5 6645387 6645683 -196439849 - AluSq SINE Alu -22 291 1 223 315 44 66 chr5 6645683 6645745 -196439787 + MER5A DNA MER1_type 127 189 0 22 35 0 0 chr5 6647265 6647294 -196438238 + AT_rich Low_complexity Low_complexity 1 29 0 1452 168 27 8 chr5 6647380 6647642 -196437890 - AluSx SINE Alu -5 307 41 1841 114 4 15 chr5 6647642 6647914 -196437618 + AluSx SINE Alu 16 285 -27 231 242 21 74 chr5 6649115 6649210 -196436322 + MIR SINE MIR 103 192 -70 2329 70 0 0 chr5 6649811 6650116 -196435416 + AluY SINE Alu 1 305 0 2094 127 43 0 chr5 6650230 6650529 -196435003 + AluSx SINE Alu 1 312 0 198 303 30 0 chr5 6651175 6651241 -196434291 - MIR SINE MIR -87 121 54 225 310 141 49 chr5 6651402 6651586 -196433946 + MIR3 SINE MIR 3 203 -5 240 59 0 0 chr5 6651709 6651743 -196433789 + (ATGGTG)n Simple_repeat Simple_repeat 2 35 0 564 251 84 6 chr5 6652514 6652687 -196432845 - MIR SINE MIR -9 253 64 2091 132 24 32 chr5 6652854 6653232 -196432300 - THE1C LTR MaLR 0 375 1 1565 177 0 28 chr5 6653444 6653727 -196431805 - AluJb SINE Alu -16 296 22 1561 183 3 21 chr5 6654938 6655259 -196430273 - AluJb SINE Alu 0 316 1 2150 151 35 14 chr5 6657079 6657378 -196428154 + L1MA8 LINE L1 5860 6172 -119 207 0 0 0 chr5 6657378 6657401 -196428131 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2150 151 35 14 chr5 6657401 6657524 -196428008 + L1MA8 LINE L1 6172 6291 0 3524 227 68 49 chr5 6657737 6659052 -196426480 + L1MC4 LINE L1 6702 8040 -2 925 243 11 21 chr5 6659600 6659884 -196425648 - MER33 DNA MER1_type 0 324 44 180 0 0 0 chr5 6661811 6661831 -196423701 + (T)n Simple_repeat Simple_repeat 1 20 0 200 83 0 28 chr5 6662407 6662443 -196423089 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 2697 70 26 0 chr5 6662443 6662829 -196422703 - L1PA4 LINE L1 -24 6131 5736 864 230 9 28 chr5 6662869 6663086 -196422446 + MER20 DNA MER1_type 6 218 -1 444 152 30 0 chr5 6663289 6663388 -196422144 + (TA)n Simple_repeat Simple_repeat 2 103 0 28 29 0 0 chr5 6663456 6663491 -196422041 + AT_rich Low_complexity Low_complexity 1 35 0 25 31 0 0 chr5 6663631 6663663 -196421869 + AT_rich Low_complexity Low_complexity 1 32 0 429 171 67 98 chr5 6663891 6664055 -196421477 + MER58B DNA MER1_type 175 333 -8 217 322 0 0 chr5 6664056 6664115 -196421417 + L2 LINE L2 3255 3313 0 411 238 81 31 chr5 6664647 6664807 -196420725 - MLT1J2 LTR MaLR -219 231 64 255 299 39 0 chr5 6664970 6665047 -196420485 + MIR SINE MIR 52 131 -77 494 310 33 5 chr5 6665327 6665511 -196420021 - MIR SINE MIR -43 219 31 953 266 83 32 chr5 6665622 6666054 -196419478 - LTR16A1 LTR ERVL -1 456 3 390 282 17 0 chr5 6667462 6667579 -196417953 + LTR16A1 LTR ERVL 21 139 -318 484 294 69 40 chr5 6667662 6668189 -196417343 + L1MDa LINE L1 1244 1828 -4830 320 294 29 44 chr5 6668239 6668375 -196417157 + HAL1 LINE L1 362 495 -2012 294 237 0 0 chr5 6668423 6668499 -196417033 + (TA)n Simple_repeat Simple_repeat 1 76 0 298 191 186 55 chr5 6668784 6669020 -196416512 + HAL1 LINE L1 908 1174 -1333 788 290 82 22 chr5 6669054 6669506 -196416026 + HAL1 LINE L1 1756 2234 -273 249 254 16 25 chr5 6669520 6669642 -196415890 + HAL1 LINE L1 2270 2390 -117 24 32 0 0 chr5 6670350 6670381 -196415151 + AT_rich Low_complexity Low_complexity 1 31 0 817 185 6 0 chr5 6670472 6670650 -196414882 - L1MA6 LINE L1 -11 6289 6111 2221 71 0 0 chr5 6670825 6671093 -196414439 + AluY SINE Alu 29 296 -15 222 37 0 0 chr5 6671106 6671133 -196414399 + (TG)n Simple_repeat Simple_repeat 2 28 0 1568 215 81 39 chr5 6671927 6672410 -196413122 + MLT1D LTR MaLR 1 503 -2 1103 218 100 50 chr5 6673181 6673621 -196411911 - MLT1C LTR MaLR 0 467 6 344 219 14 0 chr5 6673777 6673850 -196411682 - MER20 DNA MER1_type 0 219 146 1709 151 15 4 chr5 6673882 6674154 -196411378 + AluJb SINE Alu 1 275 -37 249 188 0 21 chr5 6675009 6675057 -196410475 + L3 LINE CR1 1526 1572 -5 1500 190 62 60 chr5 6675705 6676169 -196409363 - MLT1C LTR MaLR 0 467 3 864 174 177 119 chr5 6676259 6676357 -196409175 - MLT1A1 LTR MaLR 0 365 274 1673 190 0 29 chr5 6676357 6676667 -196408865 + AluJb SINE Alu 10 310 -2 864 174 177 119 chr5 6676667 6676912 -196408620 - MLT1A1 LTR MaLR -91 274 2 441 129 0 0 chr5 6676983 6677053 -196408479 + (TATATG)n Simple_repeat Simple_repeat 4 73 0 21 0 0 0 chr5 6677879 6677900 -196407632 + AT_rich Low_complexity Low_complexity 1 21 0 304 357 132 0 chr5 6678395 6678622 -196406910 - MIR SINE MIR -1 261 5 214 116 0 47 chr5 6678641 6678684 -196406848 + (TCC)n Simple_repeat Simple_repeat 2 42 0 187 318 82 45 chr5 6678949 6679059 -196406473 + MER5A DNA MER1_type 36 149 -40 209 213 0 0 chr5 6679369 6679416 -196406116 + (TGAA)n Simple_repeat Simple_repeat 3 49 0 1183 162 5 18 chr5 6681219 6681441 -196404091 - MER20 DNA MER1_type 0 219 1 465 203 95 42 chr5 6681722 6681880 -196403652 + MIR SINE MIR 35 201 -61 390 196 52 0 chr5 6682306 6682403 -196403129 - MLT1H1 LTR MaLR 0 555 454 344 88 18 0 chr5 6682566 6682623 -196402909 + (TC)n Simple_repeat Simple_repeat 1 58 0 371 298 105 11 chr5 6682685 6682964 -196402568 - MLT1H1 LTR MaLR -292 263 1 180 336 109 34 chr5 6682967 6683086 -196402446 - MER5A DNA MER1_type -40 149 22 286 232 30 30 chr5 6683171 6683270 -196402262 + Charlie7 DNA MER1_type 131 229 -2383 284 272 35 18 chr5 6683346 6683460 -196402072 + Charlie7 DNA MER1_type 1487 1602 -1010 2782 107 46 7 chr5 6683694 6684152 -196401380 + L1PB1 LINE L1 5676 6151 0 21 0 0 0 chr5 6684256 6684277 -196401255 + AT_rich Low_complexity Low_complexity 1 21 0 751 274 64 24 chr5 6684309 6684526 -196401006 + Charlie7 DNA MER1_type 1942 2149 -463 1820 106 23 0 chr5 6684526 6684782 -196400750 - AluY SINE Alu -11 300 39 751 274 64 24 chr5 6684782 6685141 -196400391 + Charlie7 DNA MER1_type 2149 2612 0 21 0 0 0 chr5 6685473 6685494 -196400038 + AT_rich Low_complexity Low_complexity 1 21 0 909 262 5 0 chr5 6686387 6686601 -196398931 - MER58A DNA MER1_type -9 215 1 24 67 0 0 chr5 6686698 6686743 -196398789 + AT_rich Low_complexity Low_complexity 1 45 0 246 105 0 0 chr5 6687464 6687502 -196398030 + (TG)n Simple_repeat Simple_repeat 2 39 0 24 0 0 0 chr5 6687837 6687861 -196397671 + AT_rich Low_complexity Low_complexity 1 24 0 909 159 5 15 chr5 6688161 6688356 -196397176 - L1MA4 LINE L1 -7 6293 6101 385 110 79 18 chr5 6690062 6690226 -196395306 + (TCTA)n Simple_repeat Simple_repeat 4 177 0 1952 236 165 5 chr5 6690511 6691074 -196394458 + MLT1E1 LTR MaLR 1 653 -1 936 204 9 18 chr5 6691078 6691303 -196394229 - MLT1D LTR MaLR 0 505 283 249 257 135 0 chr5 6691343 6691417 -196394115 - MLT1D LTR MaLR -541 85 2 2075 113 39 0 chr5 6692097 6692381 -196393151 + AluSg1 SINE Alu 1 295 -14 829 210 95 5 chr5 6692656 6692856 -196392676 - MER20 DNA MER1_type -1 218 1 327 241 60 0 chr5 6693139 6693222 -196392310 + MIR SINE MIR 125 212 -50 231 297 117 14 chr5 6693707 6693852 -196391680 + MIR3 SINE MIR 26 185 -23 1820 147 124 48 chr5 6694256 6694652 -196390880 - MSTA LTR MaLR -2 426 1 7603 150 5 34 chr5 6694652 6696075 -196389457 - MSTA-int LTR MaLR 0 1580 200 470 231 48 27 chr5 6696086 6696233 -196389299 + LTR49-int LTR ERV1 3058 3207 -3124 29606 100 20 57 chr5 6696234 6702612 -196382920 - L1PA7 LINE L1 -1 6153 12 1016 166 10 5 chr5 6702623 6702822 -196382710 - MSTA-int LTR MaLR -1378 202 3 1813 151 133 21 chr5 6702826 6703209 -196382323 - MSTA LTR MaLR -2 426 1 395 280 10 0 chr5 6703248 6703348 -196382184 - MER58 DNA MER1_type -2310 110 10 2178 226 59 6 chr5 6703787 6704314 -196381218 - MER68 LTR ERV1 -7 555 1 24 32 0 0 chr5 6704461 6704492 -196381040 + AT_rich Low_complexity Low_complexity 1 31 0 265 324 39 10 chr5 6704673 6704775 -196380757 - MIR SINE MIR -105 157 53 21 71 0 0 chr5 6706166 6706208 -196379324 + AT_rich Low_complexity Low_complexity 1 42 0 325 255 33 85 chr5 6706289 6706501 -196379031 - L1MC5 LINE L1 -36 7925 7725 318 375 53 33 chr5 6706544 6706904 -196378628 + L3 LINE CR1 1133 1499 -78 247 261 52 70 chr5 6707103 6707218 -196378314 + MIR SINE MIR 32 144 -118 2000 243 18 6 chr5 6708526 6709037 -196376495 - LTR53 LTR ERVL 0 519 3 221 232 11 63 chr5 6709811 6709906 -196375626 + CT-rich Low_complexity Low_complexity 5 94 0 2103 138 0 53 chr5 6710611 6710967 -196374565 - MER1B DNA MER1_type 0 337 1 198 0 0 0 chr5 6711227 6711249 -196374283 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 31 44 0 0 chr5 6711252 6711297 -196374235 + AT_rich Low_complexity Low_complexity 1 45 0 20403 20 0 0 chr5 6711297 6714582 -196370950 - L1HS LINE L1 0 6155 2871 2276 28 0 0 chr5 6714582 6714870 -196370662 + L1HS LINE L1 2580 2867 -3279 2022 128 6 25 chr5 6715085 6715404 -196370128 + AluSq SINE Alu 1 313 0 365 278 136 6 chr5 6715464 6715633 -196369899 - MIR SINE MIR -24 238 48 1184 331 118 28 chr5 6717449 6718689 -196366843 - L2 LINE L2 0 3313 1954 229 191 0 0 chr5 6720022 6720064 -196365468 + L2 LINE L2 3268 3309 -4 440 284 62 40 chr5 6722180 6722356 -196363176 + MIR SINE MIR 16 195 -67 1094 261 72 19 chr5 6722897 6723273 -196362259 - MSTD LTR MaLR 0 396 1 199 310 60 114 chr5 6724335 6724519 -196361013 + L2 LINE L2 2919 3092 -180 2724 167 39 6 chr5 6724582 6725115 -196360417 - MER34C LTR ERV1 0 585 35 1091 233 93 77 chr5 6725232 6725725 -196359807 - MLT1D LTR MaLR 0 505 5 23 33 0 0 chr5 6728643 6728673 -196356859 + AT_rich Low_complexity Low_complexity 1 30 0 527 165 0 10 chr5 6728819 6728916 -196356616 - Tigger7 DNA MER2_type -2 2585 2490 * 1116 222 44 4 chr5 6728915 6729163 -196356369 - Tigger7 DNA MER2_type -466 267 10 430 283 36 7 chr5 6729512 6729650 -196355882 - L2 LINE L2 -1 3312 3171 409 323 137 20 chr5 6729692 6730029 -196355503 - L2 LINE L2 -276 3037 2664 470 268 168 9 chr5 6730377 6730597 -196354935 + MIR SINE MIR 8 262 0 1456 226 94 5 chr5 6730694 6731118 -196354414 + MLT1C LTR MaLR 6 467 0 1326 156 8 16 chr5 6731433 6731683 -196353849 - L1PB1 LINE L1 -4 6147 5900 255 247 94 12 chr5 6732841 6732926 -196352606 + L2 LINE L2 3220 3311 -2 21 0 0 0 chr5 6733228 6733249 -196352283 + AT_rich Low_complexity Low_complexity 1 21 0 33 43 0 0 chr5 6735892 6735939 -196349593 + AT_rich Low_complexity Low_complexity 1 47 0 300 232 12 24 chr5 6736462 6736544 -196348988 + L1ME4a LINE L1 5856 5936 -185 22 35 0 0 chr5 6736746 6736775 -196348757 + AT_rich Low_complexity Low_complexity 1 29 0 2332 122 34 0 chr5 6738007 6738359 -196347173 + THE1B LTR MaLR 1 364 0 239 228 22 43 chr5 6738368 6738460 -196347072 + CT-rich Low_complexity Low_complexity 4 93 0 290 275 12 0 chr5 6738731 6738811 -196346721 - MER20 DNA MER1_type -1 218 138 229 284 11 49 chr5 6741529 6741712 -196343820 + (CATATA)n Simple_repeat Simple_repeat 2 177 0 2063 128 13 13 chr5 6742710 6743016 -196342516 - AluSx SINE Alu -6 306 1 1787 161 0 49 chr5 6743901 6744225 -196341307 + AluJb SINE Alu 2 309 -3 897 129 7 21 chr5 6745111 6745251 -196340281 + AluJb SINE Alu 1 138 -174 306 291 67 67 chr5 6745491 6745701 -196339831 + L2 LINE L2 2563 2772 -542 218 313 63 115 chr5 6745732 6746157 -196339375 + L2 LINE L2 2868 3270 -2 2470 70 0 0 chr5 6746351 6746651 -196338881 + AluY SINE Alu 1 300 -11 38 0 0 0 chr5 6747192 6747230 -196338302 + AT_rich Low_complexity Low_complexity 1 38 0 30 0 0 0 chr5 6747677 6747707 -196337825 + AT_rich Low_complexity Low_complexity 1 30 0 337 304 58 12 chr5 6748117 6748288 -196337244 - MIR SINE MIR -20 242 64 2145 100 0 42 chr5 6748619 6748930 -196336602 - AluY SINE Alu -11 300 3 349 309 93 27 chr5 6749935 6750194 -196335338 - MLT1L LTR MaLR -10 605 330 180 111 0 0 chr5 6750431 6750458 -196335074 + (CA)n Simple_repeat Simple_repeat 1 27 0 897 220 4 60 chr5 6750583 6750815 -196334717 - MER20 DNA MER1_type 0 219 1 2633 42 0 0 chr5 6752603 6752910 -196332622 + AluY SINE Alu 1 307 -4 288 98 20 0 chr5 6753663 6753714 -196331818 - L1PB2 LINE L1 -1 6150 6099 288 98 20 0 chr5 6753753 6753804 -196331728 - L1PB2 LINE L1 -1 6150 6099 2468 128 5 3 chr5 6753843 6754232 -196331300 - L1PB2 LINE L1 -1 6150 5761 2197 162 13 8 chr5 6754419 6754807 -196330725 - MLT1B LTR MaLR 0 390 1 288 318 86 20 chr5 6755102 6755253 -196330279 + MIR SINE MIR 89 249 -13 288 304 0 38 chr5 6755261 6755340 -196330192 + L2 LINE L2 3197 3272 0 350 176 14 14 chr5 6755901 6755975 -196329557 - MLT1C LTR MaLR 0 467 394 1471 139 0 8 chr5 6755989 6756241 -196329291 - L1PA14 LINE L1 -2 6159 5910 7012 196 20 50 chr5 6756241 6758510 -196327022 + L1PA12 LINE L1 2604 4789 -2795 960 218 150 35 chr5 6758510 6758877 -196326655 - MLT1C LTR MaLR -58 409 1 533 293 131 38 chr5 6760317 6760408 -196325124 + L2 LINE L2 2855 2936 -377 813 275 28 0 chr5 6760408 6760626 -196324906 - MER58A DNA MER1_type 0 224 1 533 293 131 38 chr5 6760626 6760954 -196324578 + L2 LINE L2 2936 3313 0 1945 196 3 8 chr5 6760961 6761328 -196324204 + MLT1A1 LTR MaLR 1 365 0 353 354 39 8 chr5 6761348 6761478 -196324054 + L2 LINE L2 3137 3270 -2 214 303 123 58 chr5 6763405 6763560 -196321972 - MIR SINE MIR -78 184 20 182 345 0 0 chr5 6763747 6763805 -196321727 + L3b LINE CR1 1186 1243 -340 307 304 9 9 chr5 6764237 6764352 -196321180 - MER94 DNA DNA -18 116 2 229 336 78 9 chr5 6766074 6766190 -196319342 - MIR SINE MIR -72 190 67 629 13 13 0 chr5 6766278 6766356 -196319176 + (TCTA)n Simple_repeat Simple_repeat 3 81 0 21 0 0 0 chr5 6766422 6766443 -196319089 + AT_rich Low_complexity Low_complexity 1 21 0 2270 110 3 0 chr5 6766723 6767024 -196318508 + AluSp SINE Alu 1 302 -11 414 0 0 0 chr5 6767073 6767119 -196318413 + (TA)n Simple_repeat Simple_repeat 1 46 0 185 175 25 25 chr5 6767282 6767322 -196318210 - MIR SINE MIR 0 262 223 2126 154 0 40 chr5 6769154 6769505 -196316027 - MER1B DNA MER1_type 0 337 1 607 241 89 11 chr5 6769512 6769723 -196315809 + MIR SINE MIR 36 262 0 180 77 0 0 chr5 6770000 6770026 -196315506 + (TTG)n Simple_repeat Simple_repeat 2 27 0 489 259 9 26 chr5 6773224 6773340 -196312192 - MER81 DNA DNA 0 114 1 216 296 80 0 chr5 6775145 6775233 -196310299 + MIR SINE MIR 51 145 -117 446 311 137 5 chr5 6775766 6775978 -196309554 + MIR SINE MIR 10 249 -13 744 33 0 0 chr5 6776435 6776526 -196309006 + (CA)n Simple_repeat Simple_repeat 2 92 0 219 330 117 10 chr5 6777582 6777685 -196307847 - MIR3 SINE MIR -2 206 93 1124 244 69 41 chr5 6777704 6778068 -196307464 - MLT1A2 LTR MaLR 0 374 1 229 374 80 0 chr5 6778151 6778338 -196307194 - MIR SINE MIR -33 229 28 1576 180 17 20 chr5 6778779 6779079 -196306453 + AluJo SINE Alu 1 299 -13 1945 139 0 0 chr5 6780330 6780633 -196304899 - AluSg1 SINE Alu 0 303 1 204 306 52 60 chr5 6781887 6782021 -196303511 - MIR SINE MIR -50 212 80 265 282 19 19 chr5 6782998 6783101 -196302431 + CT-rich Low_complexity Low_complexity 2 104 0 312 286 40 48 chr5 6784822 6784948 -196300584 - L2 LINE L2 -18 3295 3171 221 294 109 23 chr5 6785136 6785401 -196300131 - L2 LINE L2 -1325 1989 1702 1747 171 48 25 chr5 6785843 6786199 -196299333 - MLT1A1 LTR MaLR 0 365 2 953 207 76 11 chr5 6787237 6787512 -196298020 + L1MA4 LINE L1 6005 6297 -3 510 149 184 0 chr5 6788502 6788616 -196296916 + L1MB7 LINE L1 6049 6183 -1 1585 218 0 0 chr5 6788976 6789274 -196296258 + AluJo SINE Alu 1 298 -14 569 329 62 26 chr5 6789649 6790071 -196295461 + HAL1b LINE L1 83 519 -829 234 328 46 36 chr5 6791222 6791417 -196294115 - L2 LINE L2 -493 2821 2625 545 226 123 64 chr5 6791606 6791810 -196293722 + MER106A DNA MER1_type 21 236 0 195 317 59 10 chr5 6791820 6791921 -196293611 - L2 LINE L2 -778 2536 2431 216 264 170 50 chr5 6791976 6792135 -196293397 - L2 LINE L2 -59 3254 3077 1562 227 66 37 chr5 6793909 6794363 -196291169 + MLT1C LTR MaLR 1 467 0 1966 125 10 16 chr5 6795577 6795889 -196289643 + AluSg SINE Alu 1 310 0 1992 244 58 70 chr5 6797618 6798275 -196287257 - MLT1E1 LTR MaLR 0 654 6 2024 177 28 14 chr5 6800485 6800841 -196284691 + MLT1A1 LTR MaLR 1 361 -4 180 0 0 0 chr5 6800904 6800924 -196284608 + (A)n Simple_repeat Simple_repeat 1 20 0 1703 195 22 30 chr5 6803378 6803742 -196281790 - MLT1A1 LTR MaLR 0 365 5 1133 162 11 109 chr5 6804888 6805172 -196280360 - L1MA9 LINE L1 -25 6287 6032 207 262 24 60 chr5 6805875 6805959 -196279573 + MER5B DNA MER1_type 27 107 -71 248 302 171 24 chr5 6807703 6807908 -196277624 - MIR SINE MIR 0 262 28 281 218 30 99 chr5 6807929 6808030 -196277502 - L2 LINE L2 -24 3289 3196 439 116 40 36 chr5 6809883 6810187 -196275345 + (TA)n Simple_repeat Simple_repeat 1 305 0 2239 167 24 0 chr5 6810206 6810578 -196274954 - MLT1B LTR MaLR -9 381 1 228 277 116 9 chr5 6811303 6811415 -196274117 + MIR3 SINE MIR 84 207 -1 410 180 22 0 chr5 6811586 6811675 -196273857 + (CATATA)n Simple_repeat Simple_repeat 2 92 0 265 328 50 17 chr5 6812108 6812227 -196273305 + MIR3 SINE MIR 36 158 -50 886 176 99 43 chr5 6812413 6812715 -196272817 + MER33 DNA MER1_type 5 323 -1 22 0 0 0 chr5 6813401 6813423 -196272109 + AT_rich Low_complexity Low_complexity 1 22 0 5574 81 7 19 chr5 6813857 6814611 -196270921 - L1PA8A LINE L1 0 6131 5387 790 147 159 0 chr5 6814986 6815149 -196270383 + MER53 DNA DNA 1 189 0 243 348 70 21 chr5 6815949 6816136 -196269396 - L2 LINE L2 -1 3312 3117 362 314 80 7 chr5 6819125 6819262 -196266270 - MER5B DNA MER1_type -3 175 29 447 68 0 0 chr5 6819904 6819923 -196265609 + (CA)n Simple_repeat Simple_repeat 1 78 0 447 68 0 0 chr5 6819923 6819982 -196265550 + (CA)n Simple_repeat Simple_repeat 2 60 0 2174 133 0 0 chr5 6819994 6820295 -196265237 - AluSx SINE Alu -11 301 1 347 285 76 83 chr5 6820418 6821033 -196264499 + L1ME4a LINE L1 5468 6078 -43 910 286 84 23 chr5 6821397 6821893 -196263639 + L2 LINE L2 2723 3253 -60 1540 53 5 0 chr5 6822034 6822224 -196263308 + AluY SINE Alu 116 306 -5 1510 180 92 30 chr5 6822455 6822855 -196262677 - MER69 DNA AcHobo -13 2513 2089 586 274 95 21 chr5 6823675 6824202 -196261330 - L1M4c LINE L1 -4069 2577 1926 1836 154 4 4 chr5 6824207 6824487 -196261045 - AluJb SINE Alu -19 293 14 1916 139 17 46 chr5 6824487 6824832 -196260700 - THE1B LTR MaLR 0 364 30 6668 207 24 77 chr5 6824868 6826917 -196258615 - L1M4c LINE L1 -4712 1934 5 396 40 0 0 chr5 6827128 6827178 -196258354 + (TG)n Simple_repeat Simple_repeat 1 50 0 600 263 53 13 chr5 6827242 6827394 -196258138 + MER5A DNA MER1_type 32 189 0 571 294 82 77 chr5 6827834 6828628 -196256904 - L1M4 LINE L1 -1322 4824 4027 23 33 0 0 chr5 6828798 6828828 -196256704 + AT_rich Low_complexity Low_complexity 1 30 0 557 280 116 57 chr5 6829011 6829589 -196255943 + L1MC4a LINE L1 5293 5904 -1904 428 279 38 25 chr5 6829979 6830137 -196255395 - LTR67 LTR ERVL -369 188 29 2282 112 0 0 chr5 6830394 6830689 -196254843 - AluSx SINE Alu -17 295 1 212 289 134 35 chr5 6830886 6831028 -196254504 - MIR3 SINE MIR -23 185 30 305 266 164 83 chr5 6831349 6831579 -196253953 + L2 LINE L2 2694 2904 -409 2525 193 74 55 chr5 6831579 6832122 -196253410 - MLT2B3 LTR ERVL 0 554 2 305 266 164 83 chr5 6832122 6832282 -196253250 + L2 LINE L2 2904 3116 -197 375 188 83 21 chr5 6834062 6834158 -196251374 + LTR16A1 LTR ERVL 5 106 -351 1956 158 78 45 chr5 6834203 6834421 -196251111 - MLT1B LTR MaLR -4 386 150 2243 115 3 0 chr5 6834421 6834726 -196250806 - AluSx SINE Alu -2 310 5 1956 158 78 45 chr5 6834726 6834881 -196250651 - MLT1B LTR MaLR -240 150 1 444 19 0 0 chr5 6834892 6834945 -196250587 + (T)n Simple_repeat Simple_repeat 1 53 0 2233 203 65 15 chr5 6835473 6835951 -196249581 + MLT1D LTR MaLR 1 502 -3 1156 199 5 23 chr5 6836221 6836442 -196249090 - MER58A DNA MER1_type -2 222 6 299 180 66 0 chr5 6838006 6838067 -196247465 + L1MA9 LINE L1 6243 6307 -5 1258 144 0 33 chr5 6838857 6839072 -196246460 + L1MA9 LINE L1 6100 6307 -5 330 293 14 21 chr5 6839518 6839658 -196245874 + GA-rich Low_complexity Low_complexity 3 141 0 253 286 0 0 chr5 6839836 6839913 -196245619 - L2 LINE L2 -2 3311 3235 238 246 15 0 chr5 6840694 6840759 -196244773 + L1MB4 LINE L1 6115 6180 0 2924 139 21 25 chr5 6842049 6842532 -196243000 + MER31A LTR ERV1 1 481 -4 791 180 12 66 chr5 6842541 6842708 -196242824 - AluJ SINE Alu -25 287 130 739 145 0 90 chr5 6842712 6842857 -196242675 - AluJ SINE Alu -169 133 2 392 89 69 0 chr5 6842876 6842977 -196242555 + (TA)n Simple_repeat Simple_repeat 1 108 0 275 227 53 0 chr5 6842982 6843057 -196242475 + 7SK RNA RNA 15 93 -100 1702 243 165 45 chr5 6843932 6844559 -196240973 - L1ME3A LINE L1 -5 6165 5615 5344 78 0 0 chr5 6844559 6845222 -196240310 - L1PA8 LINE L1 -7 6165 5503 1702 243 165 45 chr5 6845222 6845864 -196239668 - L1ME3A LINE L1 -555 5615 4742 22 0 0 0 chr5 6846060 6846082 -196239450 + AT_rich Low_complexity Low_complexity 1 22 0 1814 157 17 0 chr5 6846088 6846213 -196239319 + AluJb SINE Alu 4 125 -187 2203 102 3 3 chr5 6846213 6846507 -196239025 + AluSc SINE Alu 1 294 -15 1814 157 17 0 chr5 6846507 6846668 -196238864 + AluJb SINE Alu 125 295 -17 2011 135 3 3 chr5 6847905 6848202 -196237330 - AluSq SINE Alu -15 298 2 586 267 85 6 chr5 6848812 6848988 -196236544 - MIR SINE MIR -55 207 18 19935 34 10 3 chr5 6849653 6852716 -196232816 + L1PA10 LINE L1 3100 6168 0 9325 187 19 56 chr5 6852718 6854532 -196231000 + L1MC3 LINE L1 5744 7470 -315 1932 123 3 34 chr5 6854532 6854825 -196230707 + AluSx SINE Alu 1 284 -28 9325 187 19 56 chr5 6854825 6855130 -196230402 + L1MC3 LINE L1 7470 7785 0 426 255 176 7 chr5 6855519 6855672 -196229860 + MER5A DNA MER1_type 4 182 -7 253 319 12 30 chr5 6906411 6906577 -196178955 + CT-rich Low_complexity Low_complexity 2 164 0 321 242 0 53 chr5 6906703 6906798 -196178734 - L1MC4 LINE L1 -1339 6703 6614 267 103 0 0 chr5 6906798 6906837 -196178695 + (CA)n Simple_repeat Simple_repeat 2 40 0 251 328 50 17 chr5 6907266 6907385 -196178147 + MIR3 SINE MIR 36 158 -50 834 176 99 43 chr5 6907571 6907873 -196177659 + MER33 DNA MER1_type 5 323 -1 5507 78 5 19 chr5 6909014 6909769 -196175763 - L1PA8A LINE L1 0 6131 5387 689 134 204 0 chr5 6910144 6910301 -196175231 + MER53 DNA DNA 1 189 0 21 0 0 0 chr5 6911380 6911401 -196174131 + AT_rich Low_complexity Low_complexity 1 21 0 256 247 94 12 chr5 6911703 6911788 -196173744 - L2 LINE L2 -2 3311 3220 1359 152 8 16 chr5 6912947 6913197 -196172335 + L1PB1 LINE L1 5900 6147 -4 1586 226 94 5 chr5 6913512 6913936 -196171596 - MLT1C LTR MaLR 0 467 6 483 264 168 9 chr5 6914033 6914253 -196171279 - MIR SINE MIR 0 262 8 389 323 137 20 chr5 6914601 6914938 -196170594 + L2 LINE L2 2664 3037 -276 423 283 36 7 chr5 6914980 6915118 -196170414 + L2 LINE L2 3171 3312 -1 1199 222 44 4 chr5 6915467 6915715 -196169817 + Tigger7 DNA MER2_type 10 267 -466 562 165 0 10 chr5 6915714 6915811 -196169721 + Tigger7 DNA MER2_type 2390 2485 -2 * 23 33 0 0 chr5 6915957 6915987 -196169545 + AT_rich Low_complexity Low_complexity 1 30 0 33 43 0 0 chr5 6919119 6919166 -196166366 + AT_rich Low_complexity Low_complexity 1 47 0 239 174 14 29 chr5 6919702 6919771 -196165761 + L1ME4a LINE L1 5869 5936 -185 22 35 0 0 chr5 6919973 6920002 -196165530 + AT_rich Low_complexity Low_complexity 1 29 0 2353 125 31 0 chr5 6921234 6921587 -196163945 + THE1B LTR MaLR 1 364 0 223 239 22 43 chr5 6921596 6921688 -196163844 + CT-rich Low_complexity Low_complexity 4 93 0 310 275 12 0 chr5 6921959 6922039 -196163493 - MER20 DNA MER1_type -1 218 138 21 71 0 0 chr5 6924200 6924242 -196161290 + AT_rich Low_complexity Low_complexity 1 42 0 375 255 33 85 chr5 6924323 6924535 -196160997 - L1MC5 LINE L1 -36 7925 7725 309 375 53 33 chr5 6924578 6924938 -196160594 + L3 LINE CR1 1133 1499 -78 239 261 52 70 chr5 6925137 6925252 -196160280 + MIR SINE MIR 32 144 -118 2212 247 18 6 chr5 6926560 6927071 -196158461 - LTR53 LTR ERVL 0 519 3 221 232 11 63 chr5 6927845 6927940 -196157592 + CT-rich Low_complexity Low_complexity 5 94 0 2246 140 0 53 chr5 6928645 6929001 -196156531 - MER1B DNA MER1_type 0 337 1 198 0 0 0 chr5 6929261 6929283 -196156249 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 31 44 0 0 chr5 6929286 6929331 -196156201 + AT_rich Low_complexity Low_complexity 1 45 0 10139 20 6 0 chr5 6929331 6931314 -196154218 - L1HS LINE L1 -1 6154 4159 1292 234 93 75 chr5 6932447 6932939 -196152593 + MLT1D LTR MaLR 5 505 0 2987 167 39 6 chr5 6933056 6933589 -196151943 + MER34C LTR ERV1 35 585 0 199 304 60 114 chr5 6933652 6933836 -196151696 - L2 LINE L2 -180 3092 2919 1266 258 72 19 chr5 6934898 6935274 -196150258 + MSTD LTR MaLR 1 396 0 432 284 62 40 chr5 6935816 6935992 -196149540 - MIR SINE MIR -67 195 16 225 191 0 0 chr5 6938108 6938150 -196147382 - L2 LINE L2 -4 3309 3268 1087 326 121 31 chr5 6939485 6940724 -196144808 + L2 LINE L2 1954 3313 0 377 273 36 7 chr5 6942570 6942709 -196142823 + MIR SINE MIR 96 238 -24 2012 121 6 34 chr5 6942765 6943087 -196142445 - AluSq SINE Alu 0 313 1 2428 71 6 5 chr5 6943255 6943597 -196141935 - L1P LINE L1 -3230 2916 2573 * 11205 26 0 0 chr5 6943590 6944893 -196140639 + L1P LINE L1 2871 4173 -1973 190 237 34 34 chr5 6945011 6945070 -196140462 - MIR SINE MIR -66 142 84 2226 169 24 0 chr5 6945791 6946163 -196139369 + MLT1B LTR MaLR 1 381 -9 443 123 34 37 chr5 6946189 6946517 -196139015 + (TA)n Simple_repeat Simple_repeat 1 327 0 281 218 30 99 chr5 6948370 6948471 -196137061 + L2 LINE L2 3196 3289 -24 248 302 171 24 chr5 6948492 6948697 -196136835 + MIR SINE MIR 28 262 0 207 262 24 60 chr5 6950441 6950525 -196135007 - MER5B DNA MER1_type -71 107 27 1133 162 11 109 chr5 6951228 6951512 -196134020 + L1MA9 LINE L1 6032 6287 -25 1724 192 22 30 chr5 6952658 6953022 -196132510 + MLT1A1 LTR MaLR 5 365 0 189 0 0 0 chr5 6955477 6955498 -196130034 + (T)n Simple_repeat Simple_repeat 1 21 0 2024 177 28 14 chr5 6955561 6955917 -196129615 - MLT1A1 LTR MaLR -4 361 1 1967 245 58 70 chr5 6958127 6958784 -196126748 + MLT1E1 LTR MaLR 6 654 0 1966 125 10 16 chr5 6960514 6960826 -196124706 - AluSg SINE Alu 0 310 1 1562 227 66 37 chr5 6962040 6962494 -196123038 - MLT1C LTR MaLR 0 467 1 247 332 75 27 chr5 6964168 6964355 -196121177 - L2 LINE L2 -1 3312 3117 362 314 80 7 chr5 6967344 6967481 -196118051 - MER5B DNA MER1_type -3 175 29 365 215 11 0 chr5 6968123 6968216 -196117316 + (TA)n Simple_repeat Simple_repeat 1 94 0 2067 136 0 7 chr5 6968216 6968518 -196117014 - AluSx SINE Alu -12 300 1 2176 112 14 3 chr5 6969198 6969493 -196116039 - AluSx SINE Alu -14 298 1 244 272 37 88 chr5 6971159 6971295 -196114237 - MIR SINE MIR -88 174 46 748 200 8 0 chr5 6972145 6972270 -196113262 + FLAM_C SINE Alu 2 127 -16 2180 130 3 0 chr5 6972614 6972921 -196112611 - AluSx SINE Alu -4 308 1 584 212 66 7 chr5 6972975 6973112 -196112420 - MER58B DNA MER1_type -5 336 192 1274 268 89 37 chr5 6973113 6973263 -196112269 - REP3 LTR ERV -26 536 395 2154 114 0 0 chr5 6973263 6973570 -196111962 + AluSx SINE Alu 1 307 0 1274 268 89 37 chr5 6973570 6973903 -196111629 - REP3 LTR ERV -167 395 27 206 118 0 0 chr5 6974540 6974574 -196110958 + (T)n Simple_repeat Simple_repeat 1 34 0 1858 126 70 0 chr5 6974713 6974999 -196110533 + AluSg SINE Alu 1 306 -4 204 418 27 0 chr5 6975489 6975599 -196109933 - L2 LINE L2 -17 3255 3143 2023 132 13 20 chr5 6976338 6976641 -196108891 + AluSx SINE Alu 1 301 -11 199 250 42 0 chr5 6976930 6976978 -196108554 + MIR SINE MIR 82 131 -131 201 273 0 0 chr5 6977208 6977263 -196108269 + A-rich Low_complexity Low_complexity 1 55 0 22 0 0 0 chr5 6978804 6978826 -196106706 + AT_rich Low_complexity Low_complexity 1 22 0 203 258 65 0 chr5 6979135 6979197 -196106335 - MIR SINE MIR -73 189 124 1499 165 68 11 chr5 6979308 6979598 -196105934 - AluSx SINE Alu 0 305 1 357 297 84 86 chr5 6979868 6980286 -196105246 + L2 LINE L2 2848 3264 -8 404 145 0 0 chr5 6980866 6980935 -196104597 - L1MA7 LINE L1 -30 6261 6193 21 0 0 0 chr5 6982070 6982091 -196103441 + AT_rich Low_complexity Low_complexity 1 21 0 4482 97 24 14 chr5 6983046 6983674 -196101858 + L1PB1 LINE L1 5517 6150 -1 292 314 51 19 chr5 6983707 6983863 -196101669 + L1MC4a LINE L1 5765 5925 -1883 219 273 0 0 chr5 6983914 6983969 -196101563 + (TA)n Simple_repeat Simple_repeat 1 55 0 241 303 55 85 chr5 6984286 6984451 -196101081 + MIR SINE MIR 77 236 -26 229 284 11 49 chr5 6986635 6986818 -196098714 + (CATATA)n Simple_repeat Simple_repeat 2 177 0 2061 129 13 13 chr5 6987816 6988126 -196097406 - AluSx SINE Alu -2 310 1 1739 164 0 46 chr5 6989087 6989410 -196096122 + AluJo SINE Alu 2 309 -3 906 121 7 21 chr5 6990296 6990436 -196095096 + AluJb SINE Alu 1 138 -174 301 291 67 67 chr5 6990676 6990886 -196094646 + L2 LINE L2 2563 2772 -542 218 313 66 118 chr5 6990917 6991342 -196094190 + L2 LINE L2 2868 3270 -2 2502 67 0 0 chr5 6991536 6991834 -196093698 + AluY SINE Alu 1 298 -13 36 0 0 0 chr5 6992375 6992411 -196093121 + AT_rich Low_complexity Low_complexity 1 36 0 30 0 0 0 chr5 6992858 6992888 -196092644 + AT_rich Low_complexity Low_complexity 1 30 0 346 304 58 12 chr5 6993296 6993467 -196092065 - MIR SINE MIR -20 242 64 2118 99 0 51 chr5 6993798 6994111 -196091421 - AluY SINE Alu -12 299 3 442 309 93 27 chr5 6995116 6995375 -196090157 - MLT1L LTR MaLR -10 605 330 180 111 0 0 chr5 6995611 6995638 -196089894 + (CA)n Simple_repeat Simple_repeat 1 27 0 989 207 9 65 chr5 6995763 6995995 -196089537 - MER20 DNA MER1_type 0 219 1 2746 29 0 0 chr5 6997784 6998091 -196087441 + AluY SINE Alu 1 307 -4 323 98 20 0 chr5 6998844 6998895 -196086637 - L1PB2 LINE L1 -1 6150 6099 323 98 20 0 chr5 6998934 6998985 -196086547 - L1PB2 LINE L1 -1 6150 6099 2666 128 5 3 chr5 6999024 6999413 -196086119 - L1PB2 LINE L1 -1 6150 5761 2361 162 13 10 chr5 6999600 6999989 -196085543 - MLT1B LTR MaLR 0 390 1 282 318 86 20 chr5 7000284 7000435 -196085097 + MIR SINE MIR 89 249 -13 283 304 0 38 chr5 7000443 7000522 -196085010 + L2 LINE L2 3197 3272 0 386 176 14 14 chr5 7001083 7001157 -196084375 - MLT1C LTR MaLR 0 467 394 7832 195 20 50 chr5 7001160 7001171 -196084361 + L1PA12 LINE L1 2593 2603 -4981 1593 139 0 8 chr5 7001171 7001423 -196084109 - L1PA14 LINE L1 -2 6159 5910 7832 195 20 50 chr5 7001423 7003685 -196081847 + L1PA12 LINE L1 2603 4782 -2802 1117 217 147 37 chr5 7003685 7004059 -196081473 - MLT1C LTR MaLR -52 415 1 566 284 137 34 chr5 7005531 7005590 -196079942 + L2 LINE L2 2886 2938 -375 899 275 28 0 chr5 7005590 7005808 -196079724 - MER58A DNA MER1_type 0 224 1 566 284 137 34 chr5 7005808 7006136 -196079396 + L2 LINE L2 2938 3313 0 2145 194 3 8 chr5 7006143 7006510 -196079022 + MLT1A1 LTR MaLR 1 365 0 344 354 39 8 chr5 7006530 7006660 -196078872 + L2 LINE L2 3137 3270 -2 216 303 123 58 chr5 7008588 7008743 -196076789 - MIR SINE MIR -78 184 20 349 304 9 9 chr5 7009420 7009535 -196075997 - MER94 DNA DNA -18 116 2 215 336 78 9 chr5 7011257 7011373 -196074159 - MIR SINE MIR -72 190 67 593 14 14 0 chr5 7011461 7011535 -196073997 + (TCTA)n Simple_repeat Simple_repeat 3 77 0 21 0 0 0 chr5 7011601 7011622 -196073910 + AT_rich Low_complexity Low_complexity 1 21 0 2268 110 3 0 chr5 7011902 7012203 -196073329 + AluSp SINE Alu 1 302 -11 288 0 0 0 chr5 7012252 7012284 -196073248 + (TA)n Simple_repeat Simple_repeat 1 32 0 185 175 25 25 chr5 7012447 7012487 -196073045 - MIR SINE MIR 0 262 223 2267 157 0 40 chr5 7014321 7014672 -196070860 - MER1B DNA MER1_type 0 337 1 600 241 89 11 chr5 7014679 7014890 -196070642 + MIR SINE MIR 36 262 0 180 77 0 0 chr5 7015167 7015193 -196070339 + (TTG)n Simple_repeat Simple_repeat 2 27 0 489 259 9 26 chr5 7018391 7018507 -196067025 - MER81 DNA DNA 0 114 1 216 296 80 0 chr5 7020312 7020400 -196065132 + MIR SINE MIR 51 145 -117 446 311 137 5 chr5 7020933 7021145 -196064387 + MIR SINE MIR 10 249 -13 516 16 0 0 chr5 7021602 7021663 -196063869 + (CA)n Simple_repeat Simple_repeat 2 62 0 219 330 117 10 chr5 7022719 7022822 -196062710 - MIR3 SINE MIR -2 206 93 1124 244 69 41 chr5 7022841 7023205 -196062327 - MLT1A2 LTR MaLR 0 374 1 229 374 80 0 chr5 7023288 7023475 -196062057 - MIR SINE MIR -33 229 28 1603 177 17 20 chr5 7023916 7024216 -196061316 + AluJo SINE Alu 1 299 -13 1960 136 0 0 chr5 7025467 7025770 -196059762 - AluSg1 SINE Alu 0 303 1 208 259 46 74 chr5 7027025 7027133 -196058399 - MIR SINE MIR -50 212 108 265 282 19 19 chr5 7028179 7028282 -196057250 + CT-rich Low_complexity Low_complexity 2 104 0 307 294 40 48 chr5 7030006 7030132 -196055400 - L2 LINE L2 -18 3295 3171 209 306 106 19 chr5 7030321 7030586 -196054946 - L2 LINE L2 -1325 1989 1702 1586 174 48 25 chr5 7031028 7031384 -196054148 - MLT1A1 LTR MaLR 0 365 2 828 207 76 11 chr5 7032432 7032707 -196052825 + L1MA4 LINE L1 6005 6297 -3 299 175 32 0 chr5 7033697 7033760 -196051772 + L1MB7 LINE L1 6049 6113 -71 311 267 0 0 chr5 7034234 7034309 -196051223 + MIR SINE MIR 78 152 -110 2595 52 0 3 chr5 7035948 7036253 -196049279 + AluY SINE Alu 1 304 -7 1795 174 3 25 chr5 7036981 7037228 -196048304 + AluJo SINE Alu 1 241 -71 1793 155 64 25 chr5 7037228 7037589 -196047943 - THE1C LTR MaLR 0 375 1 1795 174 3 25 chr5 7037589 7037657 -196047875 + AluJo SINE Alu 241 309 -3 281 298 78 7 chr5 7038306 7038447 -196047085 - MER104 DNA Tc2 -1 179 29 788 227 146 57 chr5 7038808 7039143 -196046389 - MLT1A1 LTR MaLR 0 365 1 1700 183 59 67 chr5 7039599 7039791 -196045741 + MSTB LTR MaLR 4 196 -230 2475 77 0 0 chr5 7039791 7040102 -196045430 - AluY SINE Alu 0 311 1 1700 183 59 67 chr5 7040102 7040330 -196045202 + MSTB LTR MaLR 196 421 -5 322 370 19 19 chr5 7040761 7040923 -196044609 - MIR SINE MIR -32 230 69 516 244 161 0 chr5 7041476 7041681 -196043851 + MIR SINE MIR 13 250 -12 1089 157 52 9 chr5 7042419 7042629 -196042903 + MER20 DNA MER1_type 1 219 0 633 255 57 38 chr5 7042931 7043194 -196042338 - MLT1L LTR MaLR -221 394 127 181 390 26 0 chr5 7043587 7043664 -196041868 - MIR3 SINE MIR -21 187 109 1295 156 22 6 chr5 7043780 7044167 -196041365 - LTR47B LTR ERVL 0 443 1 317 236 46 50 chr5 7044198 7044370 -196041162 + MER87 LTR ERV1 1 146 -395 547 260 91 57 chr5 7044527 7044927 -196040605 + LTR8A LTR ERV1 280 603 -19 1925 115 0 17 chr5 7045823 7046110 -196039422 + L1PA8 LINE L1 5891 6172 0 2137 119 3 0 chr5 7046677 7046963 -196038569 + AluSx SINE Alu 1 287 -25 384 209 0 0 chr5 7047946 7048032 -196037500 + CT-rich Low_complexity Low_complexity 2 87 0 2340 69 3 16 chr5 7048135 7048439 -196037093 - AluY SINE Alu -11 300 1 22 0 0 0 chr5 7049279 7049301 -196036231 + AT_rich Low_complexity Low_complexity 1 22 0 2155 105 7 0 chr5 7050335 7050629 -196034903 + AluSx SINE Alu 1 296 -16 28 71 0 0 chr5 7050739 7050795 -196034737 + AT_rich Low_complexity Low_complexity 1 56 0 27 73 0 0 chr5 7051028 7051083 -196034449 + AT_rich Low_complexity Low_complexity 1 55 0 26 50 0 0 chr5 7051295 7051335 -196034197 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr5 7051457 7051479 -196034053 + AT_rich Low_complexity Low_complexity 1 22 0 26 0 0 0 chr5 7051488 7051514 -196034018 + AT_rich Low_complexity Low_complexity 1 26 0 1836 168 22 11 chr5 7053686 7054043 -196031489 + MER46B DNA MER2_type 1 236 0 1981 246 78 25 chr5 7055107 7055668 -196029864 - MLT1E LTR MaLR 0 593 3 404 298 56 120 chr5 7055677 7056396 -196029136 - MLT1E-int LTR MaLR -7 1364 692 713 277 62 10 chr5 7056614 7056903 -196028629 - MLT1E-int LTR MaLR -755 616 313 3675 180 28 25 chr5 7056953 7057810 -196027722 - L1MB4 LINE L1 -25 6155 5296 488 181 23 38 chr5 7057830 7057963 -196027569 - L1MA8 LINE L1 -19 6272 6142 434 278 43 16 chr5 7057996 7058183 -196027349 - MLT1E-int LTR MaLR -1174 197 6 1750 253 104 8 chr5 7058197 7058718 -196026814 - MLT1E LTR MaLR -15 578 8 2750 13 0 22 chr5 7062075 7062391 -196023141 + AluYa5 SINE Alu 1 309 -2 27 29 0 0 chr5 7064662 7064696 -196020836 + AT_rich Low_complexity Low_complexity 1 34 0 196 237 219 18 chr5 7066288 7066402 -196019130 + MIR3 SINE MIR 12 148 -60 446 350 23 18 chr5 7067086 7067303 -196018229 - MIR SINE MIR -6 256 39 21 57 0 0 chr5 7068814 7068849 -196016683 + AT_rich Low_complexity Low_complexity 1 35 0 331 315 8 24 chr5 7069937 7070064 -196015468 - MIR SINE MIR -26 236 112 344 221 87 29 chr5 7070475 7070579 -196014953 + MER91C DNA MER1_type 8 117 -23 1902 149 22 0 chr5 7073137 7073455 -196012077 - AluSx SINE Alu 0 324 1 344 266 31 16 chr5 7074342 7074470 -196011062 - L1MA9 LINE L1 -38 6274 6145 996 190 20 0 chr5 7074491 7074769 -196010763 - L1M3 LINE L1 -693 5475 5193 1324 212 47 30 chr5 7074769 7074821 -196010711 + L1MA9 LINE L1 5731 5781 -531 369 0 0 0 chr5 7074821 7074862 -196010670 + (CA)n Simple_repeat Simple_repeat 2 42 0 1324 212 47 30 chr5 7074862 7075210 -196010322 + L1MA9 LINE L1 5781 6138 -174 1317 197 18 0 chr5 7075204 7075478 -196010054 + L1M2 LINE L1 5452 5730 -582 * 400 219 202 0 chr5 7076133 7076316 -196009216 + MIR SINE MIR 13 232 -30 2025 81 3 14 chr5 7076858 7077142 -196008390 - L1PA7 LINE L1 -1 6153 5873 2108 112 47 0 chr5 7078546 7078842 -196006690 - AluSg SINE Alu 0 310 1 283 326 10 0 chr5 7081527 7081625 -196003907 + L2 LINE L2 3200 3298 -15 347 294 70 80 chr5 7082013 7082200 -196003332 - MER91A DNA MER1_type 0 196 12 671 284 15 61 chr5 7082326 7082653 -196002879 + L1M4 LINE L1 3854 4165 -1981 206 323 71 55 chr5 7083077 7083204 -196002328 - L2 LINE L2 -21 3251 3123 189 0 0 0 chr5 7083613 7083634 -196001898 + (TA)n Simple_repeat Simple_repeat 1 21 0 2095 98 9 67 chr5 7083932 7084260 -196001272 - AluSc SINE Alu 0 309 1 207 188 0 0 chr5 7084694 7084742 -196000790 + A-rich Low_complexity Low_complexity 2 49 0 296 100 0 0 chr5 7085616 7085656 -195999876 - THE1B LTR MaLR 0 355 316 1324 125 64 53 chr5 7085764 7086048 -195999484 - THE1B LTR MaLR -91 284 1 12469 92 14 0 chr5 7086049 7087607 -195997925 - THE1B-int LTR MaLR -1 1579 1 2388 136 43 14 chr5 7087609 7087961 -195997571 - THE1B LTR MaLR -2 362 1 387 60 0 0 chr5 7088696 7088746 -195996786 + (TGGA)n Simple_repeat Simple_repeat 3 52 0 265 294 50 17 chr5 7089621 7089740 -195995792 - MIR SINE MIR -37 225 103 261 219 0 0 chr5 7090839 7090912 -195994620 + (TA)n Simple_repeat Simple_repeat 1 73 0 1386 258 119 39 chr5 7090916 7091454 -195994078 - MLT1E LTR MaLR 0 593 13 7180 63 30 47 chr5 7091765 7092811 -195992721 - L1PA7 LINE L1 0 6154 5108 2449 95 0 11 chr5 7092812 7093161 -195992371 - L1PA7 LINE L1 -3063 3083 2739 207 157 20 20 chr5 7093283 7093334 -195992198 + T-rich Low_complexity Low_complexity 2 52 0 225 0 0 0 chr5 7093707 7093732 -195991800 + (TG)n Simple_repeat Simple_repeat 2 26 0 369 0 0 0 chr5 7095410 7095451 -195990081 + (CA)n Simple_repeat Simple_repeat 2 42 0 1401 184 20 13 chr5 7095692 7096086 -195989446 - L1MA4A LINE L1 -23 6280 5823 2453 89 0 0 chr5 7096092 7096395 -195989137 - AluSc SINE Alu -6 303 1 1868 245 47 38 chr5 7096478 7097111 -195988421 - L1ME1 LINE L1 -5 6230 5592 4568 242 107 31 chr5 7097503 7099280 -195986252 - L1ME1 LINE L1 -757 5458 3656 2550 278 49 35 chr5 7099297 7100245 -195985287 - L1ME1 LINE L1 -4925 965 38 2375 96 0 0 chr5 7101928 7102231 -195983301 - AluSx SINE Alu -9 303 1 21 0 0 0 chr5 7102716 7102737 -195982795 + AT_rich Low_complexity Low_complexity 1 21 0 2520 225 23 8 chr5 7103029 7103549 -195981983 + MER68 LTR ERV1 35 562 0 1814 280 88 53 chr5 7103560 7104633 -195980899 + HAL1 LINE L1 241 1351 -1156 225 0 0 0 chr5 7104714 7104739 -195980793 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 193 370 65 7 chr5 7106421 7106559 -195978973 + MIR SINE MIR 1 146 -116 526 146 73 0 chr5 7107565 7107661 -195977871 - AluJb SINE Alu -2 310 208 2431 99 3 3 chr5 7107661 7107994 -195977538 - L1PA7 LINE L1 -147 6007 5675 1491 215 18 0 chr5 7109558 7109865 -195975667 + AluJo SINE Alu 1 312 0 381 211 96 29 chr5 7110153 7110257 -195975275 + ORSL DNA AcHobo 164 274 -1 282 238 12 36 chr5 7110872 7110956 -195974576 + L2 LINE L2 3200 3281 -32 210 189 19 19 chr5 7111484 7111537 -195973995 + (TGGA)n Simple_repeat Simple_repeat 1 53 0 1937 173 0 0 chr5 7112469 7112770 -195972762 + AluSx SINE Alu 1 301 -11 279 59 0 0 chr5 7113103 7113151 -195972381 + L1PA2 LINE L1 6113 6155 0 21 71 0 0 chr5 7114124 7114166 -195971366 + AT_rich Low_complexity Low_complexity 1 42 0 4864 152 10 12 chr5 7115017 7115580 -195969952 - L1MB1 LINE L1 0 6168 5606 1897 154 3 0 chr5 7115580 7115879 -195969653 - AluSx SINE Alu -12 300 1 4864 152 10 12 chr5 7115879 7116125 -195969407 - L1MB1 LINE L1 -562 5606 5361 24 0 0 0 chr5 7116425 7116449 -195969083 + AT_rich Low_complexity Low_complexity 1 24 0 656 257 27 16 chr5 7122090 7122277 -195963255 + MER5A DNA MER1_type 1 189 0 1809 146 3 14 chr5 7122853 7123166 -195962366 + AluSx SINE Alu 1 310 0 219 36 0 0 chr5 7123219 7123247 -195962285 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 192 279 9 90 chr5 7123503 7123614 -195961918 - MIR SINE MIR -8 254 153 312 324 28 34 chr5 7123616 7123795 -195961737 - MER46C DNA MER2_type -2 336 159 257 255 10 88 chr5 7123959 7124061 -195961471 - MIR SINE MIR -65 143 50 2152 113 3 3 chr5 7127235 7127539 -195957993 + AluSp SINE Alu 2 305 0 311 193 12 0 chr5 7132087 7132170 -195953362 + CT-rich Low_complexity Low_complexity 4 87 0 2098 134 3 3 chr5 7133291 7133597 -195951935 + AluJb SINE Alu 1 306 -6 189 0 0 0 chr5 7136333 7136354 -195949178 + (T)n Simple_repeat Simple_repeat 1 21 0 301 185 99 12 chr5 7137779 7137860 -195947672 - L1MCa LINE L1 -4362 2064 1977 189 0 0 0 chr5 7142178 7142199 -195943333 + (TTTTTG)n Simple_repeat Simple_repeat 3 23 0 2862 224 44 6 chr5 7142816 7143612 -195941920 - L1MB7 LINE L1 -42 6142 5317 800 84 34 0 chr5 7143606 7143725 -195941807 + L1PA16 LINE L1 1 123 -6726 * 2109 141 35 16 chr5 7143725 7144093 -195941439 - THE1C LTR MaLR 0 375 1 8956 136 37 15 chr5 7144098 7145638 -195939894 - THE1C-int LTR MaLR -6 1574 1 2181 135 30 16 chr5 7145638 7146008 -195939524 - THE1C LTR MaLR 0 375 1 8182 198 83 16 chr5 7146008 7147752 -195937780 + L1PA16 LINE L1 119 1979 -4870 429 232 32 0 chr5 7147755 7147910 -195937622 + GA-rich Low_complexity Low_complexity 1 160 0 1294 166 169 13 chr5 7147923 7148230 -195937302 + L1PA11 LINE L1 5820 6174 0 2815 152 47 5 chr5 7148233 7148813 -195936719 + L1PA16 LINE L1 1980 2583 -4266 1067 129 31 0 chr5 7148813 7149006 -195936526 - L1PA15-16 LINE L1 -4911 1938 1740 2786 275 39 18 chr5 7149009 7150181 -195935351 + L1PA16 LINE L1 2540 3736 -3113 4041 165 42 6 chr5 7150192 7151588 -195933944 + L1PA16 LINE L1 5295 6734 -135 233 193 34 91 chr5 7151688 7151776 -195933756 + L1PA16 LINE L1 6747 6829 -40 2196 103 3 29 chr5 7151777 7152089 -195933443 + AluSp SINE Alu 1 304 -9 2721 232 17 27 chr5 7152177 7152818 -195932714 - L1M4 LINE L1 -797 5349 4716 2141 187 26 35 chr5 7152818 7153277 -195932255 + MSTB2 LTR MaLR 3 457 0 2721 232 17 27 chr5 7153277 7153455 -195932077 - L1M4 LINE L1 -1430 4716 4538 2103 118 7 10 chr5 7154238 7154534 -195930998 + AluSq SINE Alu 1 295 -18 1999 112 36 10 chr5 7154599 7154868 -195930664 + AluY SINE Alu 1 280 -31 297 0 0 0 chr5 7154868 7154901 -195930631 + (CAA)n Simple_repeat Simple_repeat 1 33 0 1999 112 36 10 chr5 7154901 7154934 -195930598 + AluY SINE Alu 280 311 0 831 237 38 114 chr5 7155871 7156293 -195929239 + MLT1B LTR MaLR 1 390 0 300 315 0 0 chr5 7157069 7157177 -195928355 + GA-rich Low_complexity Low_complexity 1 108 0 1141 175 85 90 chr5 7157630 7157951 -195927581 + MLT1A1 LTR MaLR 2 322 -43 1891 131 0 0 chr5 7157951 7158219 -195927313 - AluSc SINE Alu -5 304 37 1141 175 85 90 chr5 7158219 7158263 -195927269 + MLT1A1 LTR MaLR 322 365 0 417 281 101 26 chr5 7158379 7158834 -195926698 - MER69 DNA AcHobo -27 2499 2011 741 299 129 6 chr5 7158858 7159222 -195926310 - MER69 DNA AcHobo -2016 510 102 604 280 36 10 chr5 7159409 7159602 -195925930 + MIR SINE MIR 65 262 0 2378 73 7 0 chr5 7160688 7160991 -195924541 - AluY SINE Alu -6 305 1 1226 84 48 0 chr5 7162816 7163043 -195922489 + HERVH LTR ERV1 437 674 -7039 183 42 0 0 chr5 7163782 7163806 -195921726 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1604 89 4 0 chr5 7164071 7164308 -195921224 + HERVH LTR ERV1 437 674 -7039 5153 110 24 17 chr5 7164332 7165812 -195919720 + HERVH LTR ERV1 1 1430 -6283 35069 39 2 3 chr5 7165812 7171115 -195914417 + L1PA4 LINE L1 850 6147 -8 10154 91 8 26 chr5 7171121 7172722 -195912810 + HERVH LTR ERV1 1415 2987 -4726 5906 84 2 2 chr5 7172716 7173570 -195911962 + HERVH LTR ERV1 3140 3993 -3720 * 4260 127 1 1 chr5 7173572 7174234 -195911298 + HERVH LTR ERV1 4488 5149 -2564 1239 136 28 0 chr5 7174235 7174449 -195911083 + HERVH LTR ERV1 5600 5819 -1894 2196 96 53 11 chr5 7174449 7174823 -195910709 + HERVH LTR ERV1 7324 7713 0 2268 91 129 5 chr5 7174823 7175217 -195910315 + LTR7 LTR ERV1 1 443 -7 1492 199 30 41 chr5 7176268 7176709 -195908823 - MER65A LTR ERV1 -9 436 1 395 272 91 48 chr5 7176828 7177265 -195908267 + L1ME1 LINE L1 791 1247 -5001 2159 135 3 0 chr5 7177265 7177576 -195907956 + AluSx SINE Alu 1 312 0 395 272 91 48 chr5 7177576 7177692 -195907840 + L1ME1 LINE L1 1247 1357 -4891 352 246 126 0 chr5 7177734 7177909 -195907623 + L1ME1 LINE L1 5032 5228 -987 2198 150 14 3 chr5 7177927 7178287 -195907245 - THE1B LTR MaLR 0 364 1 741 60 0 17 chr5 7178292 7178408 -195907124 - THE1B-int LTR MaLR -6 1574 1461 * 2954 105 47 76 chr5 7178404 7178956 -195906576 - THE1B-int LTR MaLR -1044 536 1 2118 140 20 6 chr5 7178956 7179313 -195906219 - THE1B LTR MaLR 0 364 3 1919 246 78 21 chr5 7179315 7180213 -195905319 + L1ME1 LINE L1 5244 6194 -41 24 0 0 0 chr5 7180503 7180527 -195905005 + AT_rich Low_complexity Low_complexity 1 24 0 268 250 40 55 chr5 7181104 7181220 -195904312 + MLT1J2 LTR MaLR 80 157 -293 251 214 18 0 chr5 7181327 7181383 -195904149 - L1ME LINE L1 -287 5877 5821 1926 312 49 42 chr5 7181865 7182998 -195902534 + L1M3f LINE L1 41 1182 -4146 5215 25 0 5 chr5 7183014 7183624 -195901908 + L1PA3 LINE L1 5546 6152 -3 5608 182 39 11 chr5 7183756 7184303 -195901229 + L1MA8 LINE L1 4136 4666 -1625 225 0 0 0 chr5 7184303 7184328 -195901204 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 5608 182 39 11 chr5 7184328 7185378 -195900154 + L1MA8 LINE L1 4666 5807 -484 315 0 0 0 chr5 7185378 7185413 -195900119 + (CA)n Simple_repeat Simple_repeat 2 36 0 5608 182 39 11 chr5 7185413 7185814 -195899718 + L1MA8 LINE L1 5807 6195 -96 1747 236 83 18 chr5 7186369 7186938 -195898594 + L1ME1 LINE L1 5541 6146 -20 2477 80 0 0 chr5 7188663 7188974 -195896558 - AluY SINE Alu 0 311 1 588 237 179 12 chr5 7189563 7189867 -195895665 - L1MC4a LINE L1 -371 5750 5537 3173 224 41 0 chr5 7190138 7190816 -195894716 + MER54A LTR ERVL 196 901 0 408 337 27 11 chr5 7191191 7191375 -195894157 - MIR SINE MIR -68 194 8 215 195 65 39 chr5 7191586 7191663 -195893869 + MIR SINE MIR 128 206 -56 934 185 9 5 chr5 7192423 7192639 -195892893 + L1MA7 LINE L1 6065 6281 -10 639 176 0 0 chr5 7192701 7192809 -195892723 - FLAM_A SINE Alu -20 122 15 206 361 56 0 chr5 7192828 7192900 -195892632 - L2 LINE L2 -41 3231 3156 2702 112 26 24 chr5 7193017 7193438 -195892094 - MSTA LTR MaLR 0 428 7 658 345 109 7 chr5 7193479 7193890 -195891642 + LTR33 LTR ERVL 1 453 -68 13063 194 75 38 chr5 7196681 7202492 -195883040 + L1MA4A LINE L1 1 6054 -951 414 224 138 17 chr5 7202492 7202608 -195882924 + FLAM_C SINE Alu 2 131 -2 13063 194 75 38 chr5 7202608 7202852 -195882680 + L1MA4A LINE L1 6054 6288 -717 2239 156 5 39 chr5 7202952 7203394 -195882138 + L1MA4A LINE L1 6574 7000 -5 1169 241 118 42 chr5 7204360 7204816 -195880716 + MER74A LTR ERVL 5 495 -63 1364 116 0 54 chr5 7205273 7205497 -195880035 - AluSq SINE Alu -80 233 22 2447 183 37 123 chr5 7205631 7206466 -195879066 - L1MB4 LINE L1 0 6180 5418 1768 186 49 46 chr5 7206606 7207082 -195878450 - L1M3 LINE L1 -455 5725 5248 2471 98 136 2 chr5 7207084 7207481 -195878051 - L1PA14 LINE L1 -3 6158 5709 21 36 0 0 chr5 7207567 7207595 -195877937 + AT_rich Low_complexity Low_complexity 1 28 0 489 81 14 0 chr5 7208561 7208635 -195876897 - L1PA7 LINE L1 -957 5189 5115 6693 62 20 0 chr5 7208635 7209594 -195875938 + L1PA7 LINE L1 5177 6153 -1 526 240 35 84 chr5 7310470 7310722 -195774810 - L1MC4 LINE L1 -422 7620 7392 2069 104 0 52 chr5 7310722 7311050 -195774482 - AluSx SINE Alu -1 311 1 526 240 35 84 chr5 7311050 7311165 -195774367 - L1MC4 LINE L1 -650 7392 7273 2117 88 7 19 chr5 7314197 7314505 -195771027 - AluSq SINE Alu -9 304 1 1061 179 19 93 chr5 7314538 7314862 -195770670 + AluJo SINE Alu 3 302 0 419 127 0 0 chr5 7319109 7319164 -195766368 - AluSg/x SINE Alu -62 247 193 911 192 124 1 chr5 7319164 7319381 -195766151 + MLT1D LTR MaLR 234 503 -2 437 239 58 7 chr5 7319624 7319762 -195765770 + AluJb SINE Alu 2 146 -166 779 133 39 100 chr5 7320076 7320112 -195765420 - MER2 DNA MER2_type -117 228 191 1739 132 35 17 chr5 7320112 7320400 -195765132 + AluJo SINE Alu 1 293 -19 779 133 39 100 chr5 7320400 7320543 -195764989 - MER2 DNA MER2_type -154 191 60 908 145 7 14 chr5 7320842 7320987 -195764545 + MLT1A2 LTR MaLR 4 147 -227 242 158 18 53 chr5 7321002 7321059 -195764473 + MLT1A2 LTR MaLR 320 374 0 335 232 34 24 chr5 7322850 7322944 -195762588 + L1ME LINE L1 5691 5789 -381 1886 199 55 22 chr5 7322944 7323396 -195762136 + MLT1C LTR MaLR 1 467 0 335 232 34 24 chr5 7323396 7323468 -195762064 + L1ME LINE L1 5789 5859 -311 1511 141 26 30 chr5 7323475 7323744 -195761788 + AluJo SINE Alu 7 274 -38 290 88 62 12 chr5 7323747 7323827 -195761705 + (TTTA)n Simple_repeat Simple_repeat 1 84 0 303 188 188 0 chr5 7324371 7324451 -195761081 - MER21A LTR ERV1 -2 929 835 420 147 0 0 chr5 7325251 7325326 -195760206 + (CA)n Simple_repeat Simple_repeat 2 76 0 1239 91 0 0 chr5 7325329 7325504 -195760028 + (TGGA)n Simple_repeat Simple_repeat 4 178 0 237 125 14 139 chr5 7325747 7325819 -195759713 + MLT2B1 LTR ERVL 458 520 0 2192 114 0 7 chr5 7325929 7326236 -195759296 - AluSx SINE Alu -7 305 1 2119 79 14 0 chr5 7326298 7326588 -195758944 - AluY SINE Alu -17 294 1 1205 102 41 5 chr5 7326588 7326784 -195758748 - AluSg/x SINE Alu -15 297 95 2047 267 86 22 chr5 7326927 7327313 -195758219 - L2 LINE L2 -198 3115 2755 1603 166 49 11 chr5 7327313 7327597 -195757935 + AluJo SINE Alu 1 295 -17 2047 267 86 22 chr5 7327597 7328057 -195757475 - L2 LINE L2 -558 2755 2214 2104 134 30 60 chr5 7328501 7328903 -195756629 - MLT1B LTR MaLR 0 390 1 2301 72 3 0 chr5 7328983 7329276 -195756256 - AluSp SINE Alu -19 294 1 929 183 107 0 chr5 7331478 7331675 -195753857 - MER2 DNA MER2_type -118 227 10 347 239 142 45 chr5 7332496 7332651 -195752881 + MIR SINE MIR 6 175 -87 1491 55 50 15 chr5 7334283 7334483 -195751049 + AluSq SINE Alu 86 292 -21 289 269 39 62 chr5 7335402 7335532 -195750000 + MIR3 SINE MIR 15 141 -67 21 36 0 0 chr5 7336277 7336305 -195749227 + AT_rich Low_complexity Low_complexity 1 28 0 1967 116 42 11 chr5 7337391 7337675 -195747857 + AluSq SINE Alu 1 293 -20 237 208 198 31 chr5 7338651 7338747 -195746785 - L2 LINE L2 -2833 481 370 257 173 19 0 chr5 7341778 7341830 -195743702 + MER4-int LTR ERV1 1104 1156 -5442 1032 156 0 0 chr5 7341831 7342011 -195743521 + (TG)n Simple_repeat Simple_repeat 1 180 0 4610 161 48 9 chr5 7343575 7344437 -195741095 + MER54A LTR ERVL 1 895 -6 231 217 0 0 chr5 7344441 7344487 -195741045 + MIR SINE MIR 102 147 -115 25 31 0 0 chr5 7345284 7345316 -195740216 + AT_rich Low_complexity Low_complexity 1 32 0 526 197 66 7 chr5 7345566 7345703 -195739829 - L1MB3 LINE L1 -99 6084 5940 2408 92 0 0 chr5 7345705 7345999 -195739533 + AluSg SINE Alu 1 294 -16 2222 111 53 42 chr5 7345999 7346359 -195739173 - THE1B LTR MaLR 0 364 1 282 261 123 15 chr5 7348739 7348869 -195736663 + L2 LINE L2 2891 3034 -279 287 333 50 0 chr5 7348923 7349022 -195736510 + L2 LINE L2 3210 3313 0 1986 131 25 0 chr5 7349430 7349712 -195735820 - AluY SINE Alu -22 289 1 704 78 0 0 chr5 7352303 7352393 -195733139 + THE1C LTR MaLR 1 90 -285 1337 171 89 0 chr5 7352404 7352662 -195732870 + MER50 LTR ERV1 431 711 -23 1752 176 0 35 chr5 7353135 7353454 -195732078 - AluJb SINE Alu -4 308 1 273 293 53 30 chr5 7353555 7353688 -195731844 - MLT1I LTR MaLR -52 357 222 937 108 67 121 chr5 7353795 7353962 -195731570 - MER39B LTR ERV1 -1 652 500 1764 155 30 0 chr5 7353962 7354233 -195731299 - AluJo SINE Alu -22 290 12 937 108 67 121 chr5 7354233 7354305 -195731227 - MER39B LTR ERV1 -153 500 426 2363 82 10 0 chr5 7354590 7354883 -195730649 - AluSx SINE Alu -16 296 1 2007 143 3 10 chr5 7354957 7355281 -195730251 - AluSx SINE Alu 0 312 1 1974 129 7 7 chr5 7355823 7356117 -195729415 - AluSx SINE Alu -18 294 1 343 324 14 28 chr5 7356936 7357081 -195728451 + MIR SINE MIR 85 227 -35 719 222 81 0 chr5 7359816 7360001 -195725531 + Charlie1a DNA MER1_type 5 204 -1251 1643 164 28 11 chr5 7360027 7360313 -195725219 + AluJo SINE Alu 1 291 -21 942 155 263 11 chr5 7360314 7360592 -195724940 + Charlie1a DNA MER1_type 739 1086 -369 1397 168 16 29 chr5 7360607 7360851 -195724681 + AluJo SINE Alu 1 241 -71 3609 143 50 26 chr5 7360852 7360993 -195724539 - MER50 LTR ERV1 -23 711 575 2329 101 0 7 chr5 7360993 7361301 -195724231 + AluSx SINE Alu 1 306 -6 3609 143 50 26 chr5 7361301 7361853 -195723679 - MER50 LTR ERV1 -159 575 1 231 184 0 0 chr5 7361853 7361891 -195723641 + AluJo SINE Alu 238 275 -27 2424 183 99 3 chr5 7361997 7362571 -195722961 + L1MB8 LINE L1 5546 6174 -4 733 181 7 34 chr5 7362569 7362718 -195722814 + L1ME LINE L1 5421 5565 -601 * 344 229 172 19 chr5 7362894 7362972 -195722560 - LTR41 LTR ERVL -592 181 116 180 0 0 0 chr5 7362972 7362992 -195722540 + (GAAAA)n Simple_repeat Simple_repeat 2 21 0 344 229 172 19 chr5 7362992 7363070 -195722462 - LTR41 LTR ERVL -657 116 1 2382 109 3 0 chr5 7363245 7363557 -195721975 - AluSq SINE Alu 0 313 1 2114 73 48 0 chr5 7363748 7364042 -195721490 - AluSp SINE Alu 0 307 1 1486 146 108 0 chr5 7364390 7364658 -195720874 - AluSx SINE Alu -15 297 1 249 111 0 0 chr5 7364864 7364900 -195720632 + L1MC3 LINE L1 7238 7273 -512 3006 119 13 0 chr5 7364904 7365356 -195720176 - LTR3b LTR ERVK 0 500 43 1072 235 15 8 chr5 7365489 7365748 -195719784 + MLT1F1 LTR MaLR 266 526 -41 1795 183 64 43 chr5 7365748 7365767 -195719765 + MER74A LTR ERVL 1 18 -540 2237 131 3 6 chr5 7365767 7366079 -195719453 - AluSx SINE Alu -1 311 1 1795 183 64 43 chr5 7366079 7366245 -195719287 + MER74A LTR ERVL 18 179 -379 1892 146 58 18 chr5 7366245 7366575 -195718957 - MER61A LTR ERV1 0 343 1 1795 183 64 43 chr5 7366575 7366826 -195718706 + MER74A LTR ERVL 179 447 -111 2396 84 0 31 chr5 7366827 7367147 -195718385 - AluSg SINE Alu 0 310 1 1070 255 125 22 chr5 7367147 7367516 -195718016 + L2 LINE L2 1818 2224 -1090 1839 109 0 0 chr5 7367524 7367762 -195717770 + AluSx SINE Alu 56 293 -19 348 233 144 70 chr5 7368142 7368430 -195717102 - MLT1A2 LTR MaLR 0 390 69 2155 130 10 0 chr5 7369620 7369920 -195715612 + AluSx SINE Alu 1 303 -9 1298 191 73 31 chr5 7369921 7370276 -195715256 - Charlie5 DNA MER1_type -268 2344 1975 2304 99 10 0 chr5 7370282 7370584 -195714948 - AluSx SINE Alu -7 305 1 337 261 45 9 chr5 7370586 7370697 -195714835 - Charlie5 DNA MER1_type -2464 148 34 410 180 72 18 chr5 7370799 7370910 -195714622 + LTR34 LTR ERV1 1 117 -547 875 214 99 97 chr5 7370988 7371454 -195714078 + LTR34 LTR ERV1 137 695 -4 2826 101 0 5 chr5 7371986 7372363 -195713169 + THE1C LTR MaLR 1 375 0 263 238 60 24 chr5 7372549 7372633 -195712899 - MLT1L LTR MaLR -2 613 527 307 170 0 0 chr5 7373224 7373277 -195712255 + MER50 LTR ERV1 1 53 -681 616 278 70 15 chr5 7373409 7373668 -195711864 + MSTC-int LTR MaLR 329 601 -770 276 125 0 0 chr5 7373668 7373708 -195711824 - MSTA LTR MaLR 0 428 389 1632 160 0 30 chr5 7373708 7373971 -195711561 + AluJo SINE Alu 1 255 -57 1485 177 4 8 chr5 7373980 7374229 -195711303 - AluJb SINE Alu -43 269 22 943 128 20 71 chr5 7374246 7374442 -195711090 - MSTB LTR MaLR -240 186 1 259 314 154 6 chr5 7374681 7374850 -195710682 + MSTC-int LTR MaLR 692 885 -486 1701 142 0 73 chr5 7374878 7375180 -195710352 - AluJb SINE Alu -32 280 1 470 243 121 0 chr5 7375394 7375534 -195709998 + MSTC-int LTR MaLR 1215 1371 0 2360 151 78 2 chr5 7375667 7376065 -195709467 + MSTC LTR MaLR 1 428 0 387 197 197 59 chr5 7376181 7376333 -195709199 - MIR SINE MIR -80 182 10 1648 158 27 7 chr5 7376811 7377103 -195708429 - AluJb SINE Alu -14 298 1 816 168 0 45 chr5 7377558 7377713 -195707819 + AluJo SINE Alu 11 158 -154 1924 123 3 48 chr5 7377741 7378051 -195707481 + AluSx SINE Alu 1 296 -16 2048 141 7 0 chr5 7378439 7378736 -195706796 - AluSx SINE Alu -11 301 3 541 198 100 23 chr5 7378807 7379057 -195706475 + MLT1D LTR MaLR 39 325 -142 1805 111 131 8 chr5 7379057 7379408 -195706124 + MSTA LTR MaLR 1 394 -34 1180 111 7 0 chr5 7379409 7379562 -195705970 - AluSp SINE Alu -13 300 147 477 310 80 2 chr5 7380017 7380285 -195705247 + L1MB8 LINE L1 5858 6161 -5 265 205 21 28 chr5 7380439 7380690 -195704842 + CT-rich Low_complexity Low_complexity 1 249 0 210 37 0 0 chr5 7381515 7381542 -195703990 + (TC)n Simple_repeat Simple_repeat 1 27 0 587 184 0 6 chr5 7381542 7381648 -195703884 + (CA)n Simple_repeat Simple_repeat 2 108 -71 212 0 36 0 chr5 7381648 7381676 -195703856 + (TC)n Simple_repeat Simple_repeat 1 29 0 587 184 0 6 chr5 7381676 7381748 -195703784 + (CA)n Simple_repeat Simple_repeat 108 179 0 2152 112 11 0 chr5 7381909 7382196 -195703336 - AluSx SINE Alu -18 294 5 499 176 84 8 chr5 7382298 7382429 -195703103 + LTR37A LTR ERV1 286 426 0 273 302 9 35 chr5 7382690 7382806 -195702726 + G-rich Low_complexity Low_complexity 3 115 0 4588 137 58 33 chr5 7384897 7385805 -195699727 + pTR5 LTR ERV1 742 1672 -766 399 239 0 0 chr5 7385905 7385993 -195699539 + MLT1D LTR MaLR 418 505 0 2071 115 0 37 chr5 7386066 7386362 -195699170 + AluSx SINE Alu 4 288 -24 3933 170 9 58 chr5 7386390 7387149 -195698383 + MER72 LTR ERV1 1 722 0 316 224 90 14 chr5 7387979 7388168 -195697364 + L1MC5 LINE L1 7278 7414 -394 260 156 0 0 chr5 7388168 7388213 -195697319 - MLT1F1 LTR MaLR 0 567 523 780 193 76 0 chr5 7388240 7388411 -195697121 - MLT1F1 LTR MaLR -362 205 22 1845 112 18 29 chr5 7388411 7388687 -195696845 + AluSx SINE Alu 1 273 -39 858 98 196 12 chr5 7388808 7388971 -195696561 + pTR5 LTR ERV1 1833 2025 -413 278 210 30 40 chr5 7388971 7389071 -195696461 + LTR30 LTR ERV1 544 642 -80 2274 95 9 0 chr5 7389071 7389398 -195696134 + pTR5 LTR ERV1 66 395 -2043 786 231 61 47 chr5 7391086 7391298 -195694234 - MIR SINE MIR 0 262 48 531 234 148 65 chr5 7391949 7392239 -195693293 - L1MC5 LINE L1 -23 7938 7625 445 233 6 69 chr5 7393213 7393372 -195692160 - MER20 DNA MER1_type -53 166 18 25 51 0 0 chr5 7394911 7394950 -195690582 + AT_rich Low_complexity Low_complexity 1 39 0 207 0 0 0 chr5 7394976 7394999 -195690533 + (TATG)n Simple_repeat Simple_repeat 4 26 0 231 36 0 0 chr5 7395757 7395785 -195689747 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 462 143 0 0 chr5 7396266 7396343 -195689189 + (A)n Simple_repeat Simple_repeat 1 77 0 195 100 0 0 chr5 7398164 7398194 -195687338 + (CCCG)n Simple_repeat Simple_repeat 3 32 0 777 122 0 0 chr5 7398670 7398785 -195686747 + MER4D LTR ERV1 1 115 -788 1364 146 35 22 chr5 7398785 7399011 -195686521 + AluSx SINE Alu 1 229 -83 4062 148 32 37 chr5 7399035 7399840 -195685692 + MER4D LTR ERV1 103 903 0 309 277 27 20 chr5 7399851 7399999 -195685533 - LTR37A LTR ERV1 0 426 278 2272 179 56 99 chr5 7400025 7400497 -195685035 + MER72 LTR ERV1 15 451 -271 1725 166 0 30 chr5 7400497 7400792 -195684740 + AluJo SINE Alu 1 286 -26 2272 179 56 99 chr5 7400792 7400982 -195684550 + MER72 LTR ERV1 451 648 -74 398 190 86 17 chr5 7401420 7401536 -195683996 - LTR37A LTR ERV1 -295 131 8 1432 7 7 0 chr5 7401974 7402129 -195683403 - AluY SINE Alu -155 156 1 469 178 164 48 chr5 7402679 7402825 -195682707 + FRAM SINE Alu 1 162 -14 288 143 20 19 chr5 7403468 7403520 -195682012 + FRAM/FAM SINE Alu 16 63 -103 279 79 0 0 chr5 7403635 7403673 -195681859 + (TG)n Simple_repeat Simple_repeat 1 38 0 254 282 0 14 chr5 7403823 7403894 -195681638 + (TG)n Simple_repeat Simple_repeat 1 70 0 317 202 110 0 chr5 7404268 7404348 -195681184 - AluJ/FLAM SINE Alu -214 88 9 201 74 0 0 chr5 7404360 7404387 -195681145 + (CTCA)n Simple_repeat Simple_repeat 1 27 0 216 0 0 0 chr5 7404517 7404541 -195680991 + (TTAG)n Simple_repeat Simple_repeat 1 24 0 523 209 104 31 chr5 7404552 7404715 -195680817 - AluJb SINE Alu -2 310 136 689 166 92 18 chr5 7405529 7405692 -195679840 - FRAM SINE Alu -2 174 1 326 117 11 96 chr5 7406962 7407056 -195678476 + AluS SINE Alu 1 86 -217 275 235 81 12 chr5 7407815 7407922 -195677610 + AluJo SINE Alu 121 204 -98 484 347 0 0 chr5 7408724 7409025 -195676507 + (CA)n Simple_repeat Simple_repeat 1 301 0 285 36 36 36 chr5 7409280 7409336 -195676196 + (TTTTTG)n Simple_repeat Simple_repeat 5 60 0 186 174 0 0 chr5 7409650 7409696 -195675836 + (CA)n Simple_repeat Simple_repeat 1 46 0 919 279 54 56 chr5 7411062 7411152 -195674380 - MLT1I LTR MaLR 0 409 320 1672 139 12 90 chr5 7411152 7411371 -195674161 + AluJo SINE Alu 1 189 -123 1900 138 26 20 chr5 7411371 7411675 -195673857 - AluSx SINE Alu -6 306 1 1672 139 12 90 chr5 7411675 7411778 -195673754 + AluJo SINE Alu 189 298 -14 919 279 54 56 chr5 7411778 7412095 -195673437 - MLT1I LTR MaLR -89 320 3 1861 206 61 41 chr5 7412290 7412849 -195672683 - L1ME1 LINE L1 0 6166 5597 345 249 63 79 chr5 7412857 7412897 -195672635 - L1ME1 LINE L1 -2312 5473 5434 1945 155 3 10 chr5 7412897 7413206 -195672326 - AluJo SINE Alu -4 308 2 345 249 63 79 chr5 7413206 7413230 -195672302 - L1ME1 LINE L1 -2351 5434 5411 582 120 56 9 chr5 7413230 7413338 -195672194 - L1MB3 LINE L1 -4 6179 6067 345 249 63 79 chr5 7413338 7413461 -195672071 - L1ME1 LINE L1 -2374 5411 5288 226 192 0 19 chr5 7413511 7413563 -195671969 + L1M LINE L1 5310 5360 -804 243 280 220 38 chr5 7414011 7414143 -195671389 + MIR SINE MIR 82 237 -25 2213 99 74 42 chr5 7414143 7414496 -195671036 - THE1B LTR MaLR 0 364 1 735 252 52 0 chr5 7414667 7414822 -195670710 + AluJo SINE Alu 13 175 -137 818 198 99 11 chr5 7415445 7415708 -195669824 - Charlie1b DNA MER1_type -129 394 109 961 198 6 0 chr5 7415719 7415891 -195669641 + FRAM SINE Alu 1 173 -3 302 146 0 0 chr5 7416672 7416720 -195668812 - AluSp SINE Alu -122 181 134 31 20 0 20 chr5 7417060 7417078 -195668454 + AT_rich Low_complexity Low_complexity 1 18 -30 2313 101 0 0 chr5 7417078 7417374 -195668158 + AluSx SINE Alu 1 296 -16 31 20 0 20 chr5 7417374 7417404 -195668128 + AT_rich Low_complexity Low_complexity 18 48 0 2216 119 39 18 chr5 7417516 7417904 -195667628 - L1PB3 LINE L1 -74 6080 5685 250 232 295 11 chr5 7418926 7419021 -195666511 + MIR SINE MIR 32 153 -55 2255 125 0 3 chr5 7419101 7419406 -195666126 + AluJb SINE Alu 9 312 0 1870 168 3 16 chr5 7419494 7419626 -195665906 + AluJo SINE Alu 1 133 -179 2253 104 7 7 chr5 7419626 7419924 -195665608 + AluSg SINE Alu 1 298 -12 1870 168 3 16 chr5 7419924 7420106 -195665426 + AluJo SINE Alu 133 311 -1 2193 144 34 3 chr5 7420309 7420664 -195664868 - MER47A DNA MER2_type 0 366 1 1896 121 57 3 chr5 7421315 7421597 -195663935 - AluSx SINE Alu -15 297 1 2404 84 0 3 chr5 7421985 7422281 -195663251 - AluSg SINE Alu -13 297 3 1962 152 13 3 chr5 7422289 7422592 -195662940 - AluJb SINE Alu -6 306 1 565 191 45 0 chr5 7422974 7423084 -195662448 + FRAM SINE Alu 57 171 -5 259 239 146 15 chr5 7423092 7423222 -195662310 - MLT1F-int LTR MaLR -1221 150 4 981 261 105 51 chr5 7423234 7423545 -195661987 - MLT1F LTR MaLR 0 542 249 201 108 0 0 chr5 7423545 7423582 -195661950 + (CA)n Simple_repeat Simple_repeat 2 38 0 981 261 105 51 chr5 7423582 7423658 -195661874 - MLT1F LTR MaLR -293 249 179 2207 107 52 50 chr5 7423658 7423755 -195661777 + THE1B LTR MaLR 1 96 -268 2246 108 3 3 chr5 7423755 7424050 -195661482 - AluSq SINE Alu -18 295 1 2207 107 52 50 chr5 7424050 7424315 -195661217 + THE1B LTR MaLR 96 364 0 981 261 105 51 chr5 7424315 7424440 -195661092 - MLT1F LTR MaLR -363 179 1 400 264 174 28 chr5 7424441 7424619 -195660913 + L1MC4 LINE L1 7839 8042 0 1182 134 31 76 chr5 7425369 7425592 -195659940 + AluJb SINE Alu 86 298 -14 1310 131 149 62 chr5 7425797 7425835 -195659697 - MLT1A1 LTR MaLR 0 365 332 2093 121 0 0 chr5 7425835 7426151 -195659381 + AluSx SINE Alu 1 316 0 1310 131 149 62 chr5 7426151 7426447 -195659085 - MLT1A1 LTR MaLR -33 332 1 454 208 10 10 chr5 7426489 7426585 -195658947 + MLT2F LTR ERVL 1 96 -567 2316 108 0 22 chr5 7426712 7427028 -195658504 + AluSx SINE Alu 1 309 -3 948 163 7 13 chr5 7427033 7427229 -195658303 + FRAM SINE Alu 1 176 0 206 173 37 62 chr5 7427323 7427404 -195658128 + CT-rich Low_complexity Low_complexity 4 82 0 444 238 0 5 chr5 7429504 7429714 -195655818 + (CA)n Simple_repeat Simple_repeat 1 208 0 534 79 0 0 chr5 7430178 7430254 -195655278 + (CA)n Simple_repeat Simple_repeat 1 76 0 239 79 26 0 chr5 7430368 7430406 -195655126 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 456 19 0 0 chr5 7431926 7431979 -195653553 + (TTTC)n Simple_repeat Simple_repeat 4 56 0 379 331 42 13 chr5 7432151 7432429 -195653103 + L1M2 LINE L1 2786 3321 -4245 201 169 62 46 chr5 7432655 7432720 -195652812 - MIR3 SINE MIR -142 66 1 267 282 3 52 chr5 7434183 7434367 -195651165 + CT-rich Low_complexity Low_complexity 4 290 0 305 206 72 21 chr5 7438157 7438254 -195647278 + AluSg SINE Alu 2 103 -197 808 161 20 16 chr5 7438294 7438547 -195646985 + GA-rich Low_complexity Low_complexity 1 254 0 277 247 59 18 chr5 7439138 7439266 -195646266 - L1MA4A LINE L1 -349 5953 5821 244 231 0 0 chr5 7439266 7439318 -195646214 + MLT2B3 LTR ERVL 3 54 -500 243 0 0 0 chr5 7439607 7439634 -195645898 + (GTTTG)n Simple_repeat Simple_repeat 3 29 0 740 272 43 66 chr5 7440201 7440891 -195644641 - L1MA5 LINE L1 -369 5931 5265 377 320 20 20 chr5 7440934 7441087 -195644445 - L1MA5 LINE L1 -1020 5126 4974 232 300 11 33 chr5 7441468 7441558 -195643974 + CT-rich Low_complexity Low_complexity 5 92 0 578 14 14 0 chr5 7441586 7441657 -195643875 + (TTC)n Simple_repeat Simple_repeat 3 74 0 234 0 0 0 chr5 7441657 7441683 -195643849 + (TC)n Simple_repeat Simple_repeat 2 27 0 293 217 9 70 chr5 7442196 7442311 -195643221 + (GGGTG)n Simple_repeat Simple_repeat 4 111 0 444 77 0 0 chr5 7442462 7442527 -195643005 + (CA)n Simple_repeat Simple_repeat 2 66 0 521 160 9 0 chr5 7442584 7442690 -195642842 + CT-rich Low_complexity Low_complexity 4 110 0 550 203 17 34 chr5 7442835 7442953 -195642579 - FLAM_A SINE Alu -18 124 9 278 316 79 34 chr5 7442971 7443237 -195642295 - L1M4 LINE L1 -2885 3261 2984 317 255 71 50 chr5 7443328 7443469 -195642063 - L1M4 LINE L1 -3223 2923 2780 242 250 0 0 chr5 7443541 7443597 -195641935 + FLAM_A SINE Alu 41 96 -37 620 297 38 18 chr5 7444224 7444471 -195641061 - L1MA5A LINE L1 -382 5918 5665 209 256 64 26 chr5 7445072 7445150 -195640382 + MIR SINE MIR 58 138 -124 447 106 0 0 chr5 7445807 7445873 -195639659 + (TTC)n Simple_repeat Simple_repeat 2 67 0 1546 93 5 14 chr5 7446131 7446346 -195639186 + AluSg/x SINE Alu 99 311 -1 833 233 83 97 chr5 7446351 7446505 -195639027 + L1ME1 LINE L1 5674 5829 -337 2385 91 0 25 chr5 7446505 7446824 -195638708 - AluY SINE Alu 0 311 1 833 233 83 97 chr5 7446824 7447143 -195638389 + L1ME1 LINE L1 5829 6134 -32 705 151 19 0 chr5 7447144 7447250 -195638282 + FLAM_C SINE Alu 2 109 -34 1766 171 0 16 chr5 7447322 7447632 -195637900 - AluJo SINE Alu 0 312 8 1693 132 4 0 chr5 7448095 7448330 -195637202 - AluSq SINE Alu -14 299 64 799 231 19 37 chr5 7448614 7449009 -195636523 - MLT1H LTR MaLR 0 549 30 204 217 0 0 chr5 7449741 7449787 -195635745 + L2 LINE L2 2911 2956 -316 233 333 0 0 chr5 7450933 7451005 -195634527 + L2 LINE L2 2902 2973 -299 2106 200 72 4 chr5 7451404 7451878 -195633654 + L1MB8 LINE L1 5581 6086 -92 2051 115 6 32 chr5 7451991 7452303 -195633229 - AluY SINE Alu -3 308 5 29 47 0 0 chr5 7453423 7453466 -195632066 + AT_rich Low_complexity Low_complexity 1 43 0 1933 186 38 53 chr5 7453466 7453589 -195631943 + MLT1D LTR MaLR 1 124 -381 2153 101 10 10 chr5 7453589 7453609 -195631923 - AluSx SINE Alu -13 299 280 189 0 0 0 chr5 7453609 7453630 -195631902 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 2153 101 10 10 chr5 7453630 7453907 -195631625 - AluSx SINE Alu -31 281 2 1933 186 38 53 chr5 7453907 7454288 -195631244 + MLT1D LTR MaLR 124 497 -8 908 242 54 0 chr5 7454472 7454695 -195630837 + L1MC4 LINE L1 6800 7034 -1008 1234 156 0 0 chr5 7454708 7454881 -195630651 - AluSq SINE Alu -140 173 1 1924 226 66 20 chr5 7454914 7455507 -195630025 + L1MC4 LINE L1 7043 7662 -380 192 40 0 0 chr5 7455525 7455550 -195629982 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 1241 161 89 67 chr5 7455553 7455628 -195629904 + L1MB4 LINE L1 5811 5883 -297 1226 176 146 23 chr5 7455628 7455889 -195629643 + AluSg1 SINE Alu 2 294 -15 2235 115 3 13 chr5 7455891 7456204 -195629328 + AluSx SINE Alu 3 312 0 1241 161 89 67 chr5 7456204 7456486 -195629046 + L1MB4 LINE L1 5883 6179 -1 995 168 35 107 chr5 7456528 7456635 -195628897 + L1MC4 LINE L1 7709 7822 -220 810 65 28 0 chr5 7456635 7456742 -195628790 + HY1 scRNA scRNA 2 111 -1 995 168 35 107 chr5 7456742 7456755 -195628777 + L1MC4 LINE L1 7822 7834 -208 207 114 0 0 chr5 7456755 7456790 -195628742 + (TG)n Simple_repeat Simple_repeat 2 36 0 995 168 35 107 chr5 7456790 7456806 -195628726 + L1MC4 LINE L1 7834 7850 -192 2428 99 0 0 chr5 7456806 7457109 -195628423 + AluSx SINE Alu 1 303 -9 995 168 35 107 chr5 7457109 7457315 -195628217 + L1MC4 LINE L1 7850 8028 -14 3177 73 22 44 chr5 7457625 7458079 -195627453 + MLT2A1 LTR ERVL 1 444 0 766 235 105 17 chr5 7458174 7458468 -195627064 + L1ME3 LINE L1 5843 6162 0 1784 195 35 0 chr5 7459126 7459495 -195626037 - MER89 LTR ERV1 0 559 178 1087 51 0 101 chr5 7459948 7460543 -195624989 + (ACTG)n Simple_repeat Simple_repeat 1 705 0 287 208 0 0 chr5 7463471 7463524 -195622008 - PMER1 DNA MER1_type -37 53 1 189 74 0 0 chr5 7463868 7463895 -195621637 + (CA)n Simple_repeat Simple_repeat 2 28 0 198 253 44 33 chr5 7463901 7463992 -195621540 + L2 LINE L2 2191 2282 -1032 409 233 117 0 chr5 7466281 7466384 -195619148 + FLAM_A SINE Alu 1 115 -18 210 300 154 18 chr5 7466705 7466815 -195618717 + L2 LINE L2 3004 3128 -185 313 272 88 14 chr5 7467416 7467563 -195617969 + FRAM SINE Alu 8 165 -1 441 307 0 7 chr5 7467568 7467705 -195617827 - MLT1B LTR MaLR -218 172 37 231 213 44 48 chr5 7468533 7468601 -195616931 + MIR SINE MIR 1 66 -142 234 91 0 0 chr5 7468820 7468853 -195616679 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 291 175 0 0 chr5 7469849 7469906 -195615626 + CT-rich Low_complexity Low_complexity 1 57 0 256 236 5 169 chr5 7470071 7470266 -195615266 + L1MB1 LINE L1 5429 5591 -587 195 69 0 0 chr5 7470610 7470639 -195614893 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 261 269 0 0 chr5 7471236 7471303 -195614229 + L1MB1 LINE L1 5850 5916 -252 181 219 266 0 chr5 7471326 7471390 -195614142 - L2 LINE L2 -1813 1501 1421 288 250 130 0 chr5 7471512 7471604 -195613928 + AluJb SINE Alu 2 105 -197 288 0 0 0 chr5 7472824 7472856 -195612676 + (TC)n Simple_repeat Simple_repeat 1 32 0 255 140 0 0 chr5 7472856 7472906 -195612626 + (CA)n Simple_repeat Simple_repeat 2 51 0 500 174 128 58 chr5 7473941 7474113 -195611419 + AluJo SINE Alu 123 306 -6 206 241 23 23 chr5 7475154 7475241 -195610291 + GA-rich Low_complexity Low_complexity 3 89 0 473 196 114 44 chr5 7475957 7476115 -195609417 + FRAM SINE Alu 1 168 -8 180 0 0 0 chr5 7479215 7479235 -195606297 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 199 220 51 51 chr5 7479337 7479396 -195606136 - MIR SINE MIR -198 64 6 321 26 0 0 chr5 7480016 7480054 -195605478 + (GGA)n Simple_repeat Simple_repeat 3 40 0 234 164 0 0 chr5 7480853 7480908 -195604624 + T-rich Low_complexity Low_complexity 1 55 0 205 132 53 0 chr5 7481779 7481817 -195603715 + (TGGG)n Simple_repeat Simple_repeat 4 43 0 217 241 35 17 chr5 7481958 7482074 -195603458 + (CACAA)n Simple_repeat Simple_repeat 2 119 0 182 62 31 0 chr5 7482184 7482216 -195603316 + (CA)n Simple_repeat Simple_repeat 2 34 0 486 203 0 0 chr5 7482749 7482867 -195602665 + (TG)n Simple_repeat Simple_repeat 1 118 0 414 0 0 0 chr5 7483812 7483858 -195601674 + (CAG)n Simple_repeat Simple_repeat 3 48 0 261 231 115 26 chr5 7484393 7484471 -195601061 + FLAM_A SINE Alu 37 121 -12 295 270 27 72 chr5 7484550 7484661 -195600871 - FLAM_A SINE Alu -14 119 14 320 43 22 0 chr5 7485043 7485089 -195600443 + (TTTG)n Simple_repeat Simple_repeat 2 48 0 237 65 0 0 chr5 7488142 7488173 -195597359 + (TCTG)n Simple_repeat Simple_repeat 2 32 0 21 57 0 0 chr5 7489739 7489774 -195595758 + AT_rich Low_complexity Low_complexity 1 35 0 717 157 108 69 chr5 7490951 7491155 -195594377 - AluJo SINE Alu -92 220 9 543 81 0 0 chr5 7491940 7492026 -195593506 + (TG)n Simple_repeat Simple_repeat 2 87 0 259 237 118 0 chr5 7493002 7493089 -195592443 + FLAM_A SINE Alu 24 108 -25 378 0 0 0 chr5 7493939 7493981 -195591551 + (TG)n Simple_repeat Simple_repeat 2 43 0 397 267 55 17 chr5 7494619 7494823 -195590709 - L1 LINE L1 -2447 3699 3492 575 163 8 0 chr5 7497430 7497553 -195587979 + (CA)n Simple_repeat Simple_repeat 1 124 0 276 200 0 0 chr5 7497583 7497648 -195587884 + (CA)n Simple_repeat Simple_repeat 1 65 0 357 159 0 0 chr5 7497815 7497878 -195587654 + (TCTCTG)n Simple_repeat Simple_repeat 1 63 0 195 217 0 67 chr5 7498758 7498818 -195586714 - MIR3 SINE MIR -142 66 11 261 222 74 0 chr5 7499288 7499369 -195586163 - MLT2A2 LTR ERVL 0 453 367 215 231 0 0 chr5 7500024 7500063 -195585469 + (TG)n Simple_repeat Simple_repeat 2 40 0 210 37 0 0 chr5 7500695 7500722 -195584810 + (CA)n Simple_repeat Simple_repeat 2 28 0 221 228 38 19 chr5 7500836 7500994 -195584538 + (CATA)n Simple_repeat Simple_repeat 4 164 0 198 0 0 0 chr5 7501563 7501585 -195583947 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 368 323 78 6 chr5 7501630 7501797 -195583735 - L1M4 LINE L1 -2562 3584 3406 666 278 81 62 chr5 7502904 7503274 -195582258 - L1M4 LINE L1 -2882 3264 2888 208 227 23 0 chr5 7503274 7503318 -195582214 + CT-rich Low_complexity Low_complexity 2 46 0 790 257 9 4 chr5 7504834 7505060 -195580472 - L1MA3 LINE L1 -375 5930 5704 339 145 0 0 chr5 7506975 7507044 -195578488 + (CA)n Simple_repeat Simple_repeat 2 70 0 626 174 90 30 chr5 7507241 7507408 -195578124 + FRAM SINE Alu 1 176 0 207 253 12 24 chr5 7509041 7509124 -195576408 + (TA)n Simple_repeat Simple_repeat 1 82 0 246 81 0 0 chr5 7509171 7509208 -195576324 + (CA)n Simple_repeat Simple_repeat 2 38 0 180 233 50 50 chr5 7509349 7509409 -195576123 + MIR SINE MIR 6 65 -197 30 27 0 0 chr5 7509498 7509535 -195575997 + AT_rich Low_complexity Low_complexity 1 37 0 462 18 0 0 chr5 7510724 7510779 -195574753 + (CACAC)n Simple_repeat Simple_repeat 2 56 0 258 308 0 0 chr5 7511635 7511700 -195573832 + (TG)n Simple_repeat Simple_repeat 2 66 0 411 246 70 18 chr5 7511848 7511962 -195573570 - FLAM_C SINE Alu -10 123 4 265 326 62 16 chr5 7511965 7512094 -195573438 - MIR SINE MIR -113 149 15 261 326 0 12 chr5 7512542 7512628 -195572904 + GA-rich Low_complexity Low_complexity 1 85 0 306 0 0 0 chr5 7514033 7514067 -195571465 + (TTTTG)n Simple_repeat Simple_repeat 2 35 0 447 151 108 11 chr5 7514620 7514713 -195570819 - AluSq/x SINE Alu -208 105 4 309 244 109 52 chr5 7515567 7515760 -195569772 + L1MA9 LINE L1 6109 6312 0 203 303 0 15 chr5 7516061 7516127 -195569405 + (CA)n Simple_repeat Simple_repeat 1 65 0 303 28 0 0 chr5 7518198 7518234 -195567298 + (CCTG)n Simple_repeat Simple_repeat 4 39 0 537 162 89 115 chr5 7518628 7518819 -195566713 + AluJo SINE Alu 127 312 0 207 359 0 0 chr5 7519167 7519231 -195566301 + (TG)n Simple_repeat Simple_repeat 1 64 0 342 0 0 0 chr5 7519665 7519703 -195565829 + (TG)n Simple_repeat Simple_repeat 2 39 0 357 229 86 9 chr5 7519715 7519820 -195565712 - FLAM_C SINE Alu -20 113 1 319 247 142 25 chr5 7520502 7520664 -195564868 + AluJo SINE Alu 120 300 -2 204 40 0 0 chr5 7520964 7520989 -195564543 + (TG)n Simple_repeat Simple_repeat 1 25 0 24 32 0 0 chr5 7521366 7521397 -195564135 + AT_rich Low_complexity Low_complexity 1 31 0 195 100 0 0 chr5 7521930 7521960 -195563572 + (A)n Simple_repeat Simple_repeat 1 30 0 285 118 0 0 chr5 7522474 7522525 -195563007 + (T)n Simple_repeat Simple_repeat 1 51 0 378 0 0 0 chr5 7524574 7524616 -195560916 + (TG)n Simple_repeat Simple_repeat 1 42 0 302 0 26 0 chr5 7524615 7524653 -195560879 + (GA)n Simple_repeat Simple_repeat 1 39 0 * 255 114 0 0 chr5 7524652 7524696 -195560836 + (TG)n Simple_repeat Simple_repeat 2 45 0 * 192 40 0 0 chr5 7524726 7524738 -195560794 + (TG)n Simple_repeat Simple_repeat 1 37 0 192 40 0 0 chr5 7524738 7524763 -195560769 + (TG)n Simple_repeat Simple_repeat 1 25 0 302 304 136 75 chr5 7525107 7525482 -195560050 + HAL1 LINE L1 880 1277 -1230 1432 184 113 0 chr5 7525728 7525994 -195559538 - AluJo SINE Alu -16 296 1 310 193 36 72 chr5 7526897 7526980 -195558552 + L2 LINE L2 3230 3309 -4 707 245 179 25 chr5 7527101 7527509 -195558023 - L1MC4 LINE L1 -89 7953 7483 235 267 133 0 chr5 7528490 7528580 -195556952 - MIR SINE MIR -48 214 113 445 202 0 0 chr5 7528664 7528748 -195556784 + MER2 DNA MER2_type 1 84 -261 679 208 8 0 chr5 7528880 7529010 -195556522 + FLAM_A SINE Alu 1 131 -2 1977 115 10 20 chr5 7529090 7529386 -195556146 - AluSx SINE Alu -19 293 1 24 0 0 0 chr5 7529484 7529508 -195556024 + AT_rich Low_complexity Low_complexity 1 24 0 1299 122 0 0 chr5 7529798 7529978 -195555554 - AluSg/x SINE Alu -13 299 120 270 185 19 0 chr5 7530297 7530351 -195555181 + MER20 DNA MER1_type 159 213 -6 187 309 112 39 chr5 7530684 7530862 -195554670 - MIR SINE MIR -10 252 62 210 260 26 39 chr5 7531286 7531363 -195554169 + L2 LINE L2 2905 2980 -333 333 0 0 0 chr5 7532495 7532532 -195553000 + (T)n Simple_repeat Simple_repeat 1 37 0 609 243 47 42 chr5 7532839 7533053 -195552479 + MIR SINE MIR 18 232 -30 211 200 40 0 chr5 7533065 7533115 -195552417 - MIR SINE MIR -144 118 67 1706 117 58 21 chr5 7533147 7533438 -195552094 - AluSx SINE Alu -9 303 2 835 128 15 0 chr5 7533736 7533869 -195551663 + FRAM SINE Alu 18 152 -24 1719 143 4 19 chr5 7534818 7535076 -195550456 + AluJo SINE Alu 34 287 -25 1654 182 29 45 chr5 7535769 7535957 -195549575 + L1MB8 LINE L1 5757 5946 -232 2066 117 3 43 chr5 7535957 7536282 -195549250 - AluSx SINE Alu 0 312 1 1654 182 29 45 chr5 7536282 7536522 -195549010 + L1MB8 LINE L1 5946 6177 -1 1934 168 0 3 chr5 7536668 7536966 -195548566 - AluJb SINE Alu -15 297 1 2400 109 0 0 chr5 7536980 7537291 -195548241 - AluY SINE Alu 0 311 1 2027 147 13 7 chr5 7537500 7537800 -195547732 - AluJo SINE Alu -10 302 1 14169 121 30 35 chr5 7537843 7537883 -195547649 + Tigger1 DNA MER2_type 2 41 -2377 721 214 0 8 chr5 7537883 7538014 -195547518 - FLAM_A SINE Alu 0 133 4 14169 121 30 35 chr5 7538014 7538931 -195546601 + Tigger1 DNA MER2_type 41 961 -1457 2286 92 27 0 chr5 7538931 7539225 -195546307 - AluSg SINE Alu -8 302 1 14169 121 30 35 chr5 7539225 7540695 -195544837 + Tigger1 DNA MER2_type 961 2418 0 894 184 89 37 chr5 7541062 7541410 -195544122 + MLT1D LTR MaLR 1 441 -64 2376 94 3 3 chr5 7541410 7541718 -195543814 - AluSp SINE Alu -5 308 1 894 184 89 37 chr5 7541718 7541785 -195543747 + MLT1D LTR MaLR 441 503 -2 628 244 142 20 chr5 7541794 7541991 -195543541 - MIR SINE MIR -39 223 3 2487 60 3 25 chr5 7542171 7542486 -195543046 - AluY SINE Alu -3 308 1 24 0 0 0 chr5 7544118 7544142 -195541390 + AT_rich Low_complexity Low_complexity 1 24 0 721 169 90 39 chr5 7544358 7544536 -195540996 + Tigger2 DNA MER2_type 6 192 -2526 241 132 176 11 chr5 7544588 7544679 -195540853 - Tigger2 DNA MER2_type -152 2566 2461 3453 136 88 24 chr5 7544724 7545429 -195540103 - Tigger2 DNA MER2_type -1968 750 1 1103 172 43 0 chr5 7545429 7545636 -195539896 + MER2 DNA MER2_type 130 345 0 895 215 58 174 chr5 7545642 7545984 -195539548 + L2 LINE L2 2709 3042 -271 639 39 0 0 chr5 7545984 7546062 -195539470 + AluY SINE Alu 222 299 -11 895 215 58 174 chr5 7546062 7546306 -195539226 + L2 LINE L2 3042 3313 0 21 0 0 0 chr5 7546794 7546815 -195538717 + AT_rich Low_complexity Low_complexity 1 21 0 212 254 136 0 chr5 7546878 7546937 -195538595 + MIR3 SINE MIR 121 187 -21 22 0 0 0 chr5 7547299 7547321 -195538211 + AT_rich Low_complexity Low_complexity 1 22 0 2150 117 0 0 chr5 7547333 7547690 -195537842 + AluSx SINE Alu 1 357 0 665 286 106 0 chr5 7548180 7548407 -195537125 + MIR SINE MIR 6 256 -6 454 292 99 5 chr5 7548844 7549036 -195536496 + MIR SINE MIR 1 210 -52 22 94 0 0 chr5 7549861 7549925 -195535607 + GC_rich Low_complexity Low_complexity 1 64 0 842 165 0 122 chr5 7551505 7551693 -195533839 - FRAM SINE Alu -1 165 1 230 192 0 39 chr5 7552152 7552204 -195533328 - MIR SINE MIR 0 262 213 306 281 126 59 chr5 7552225 7552599 -195532933 - MLT1K LTR MaLR 0 588 190 1601 150 59 28 chr5 7552776 7552939 -195532593 - AluJb SINE Alu -17 295 118 183 42 0 0 chr5 7552939 7552963 -195532569 + (TTTG)n Simple_repeat Simple_repeat 2 25 0 1601 150 59 28 chr5 7552963 7553085 -195532447 - AluJb SINE Alu -194 118 1 324 0 0 0 chr5 7553133 7553169 -195532363 + (TG)n Simple_repeat Simple_repeat 2 37 0 2358 99 0 0 chr5 7553346 7553639 -195531893 - AluSg1 SINE Alu -16 293 1 700 218 179 29 chr5 7553642 7553950 -195531582 + L1MC4 LINE L1 7684 8037 -5 2050 121 24 13 chr5 7554330 7554628 -195530904 - AluSx SINE Alu -11 301 1 343 371 45 0 chr5 7554919 7555097 -195530435 + L1MEd LINE L1 452 637 -5482 288 0 0 0 chr5 7555153 7555185 -195530347 + (TG)n Simple_repeat Simple_repeat 1 32 0 310 224 135 13 chr5 7555298 7555454 -195530078 + Charlie2 DNA MER1_type 2671 2845 -17 369 305 48 0 chr5 7555529 7555634 -195529898 + L2 LINE L2 3202 3311 -2 365 265 55 105 chr5 7555975 7556195 -195529337 - L1MC4 LINE L1 -1 8041 5884 231 61 0 0 chr5 7556358 7556391 -195529141 + (CA)n Simple_repeat Simple_repeat 1 33 0 186 189 0 0 chr5 7556946 7556983 -195528549 + (CA)n Simple_repeat Simple_repeat 2 38 0 203 200 0 0 chr5 7559885 7559920 -195525612 + T-rich Low_complexity Low_complexity 1 35 0 225 286 0 24 chr5 7559922 7560006 -195525526 + (TATG)n Simple_repeat Simple_repeat 4 85 0 209 173 36 73 chr5 7560620 7560730 -195524802 + (CAGC)n Simple_repeat Simple_repeat 2 107 0 241 262 115 25 chr5 7561773 7561895 -195523637 - L1MA7 LINE L1 -32 6259 6127 422 246 29 22 chr5 7561913 7562051 -195523481 + L1MA7 LINE L1 5980 6118 -173 189 0 0 0 chr5 7563202 7563223 -195522309 + (TC)n Simple_repeat Simple_repeat 2 22 0 284 172 156 0 chr5 7563333 7563397 -195522135 - AluJb SINE Alu -189 113 40 207 0 0 0 chr5 7563596 7563619 -195521913 + (CA)n Simple_repeat Simple_repeat 2 24 0 253 270 14 14 chr5 7563966 7564040 -195521492 + (CA)n Simple_repeat Simple_repeat 1 74 0 289 179 137 51 chr5 7566793 7566910 -195518622 + AluSq/x SINE Alu 27 105 -197 226 203 34 0 chr5 7567359 7567418 -195518114 + (CAGA)n Simple_repeat Simple_repeat 4 64 0 347 210 57 55 chr5 7567562 7567750 -195517782 + MLT1C LTR MaLR 114 304 -163 444 77 0 0 chr5 7568558 7568623 -195516909 + (CAGAC)n Simple_repeat Simple_repeat 5 69 0 189 0 0 0 chr5 7569519 7569540 -195515992 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 561 229 96 27 chr5 7570275 7570463 -195515069 + AluJo SINE Alu 10 210 -102 258 320 66 41 chr5 7570719 7570841 -195514691 + MIR3 SINE MIR 7 131 -77 702 35 0 0 chr5 7576140 7576225 -195509307 + (CCA)n Simple_repeat Simple_repeat 1 85 0 222 37 0 0 chr5 7576228 7576255 -195509277 + (CAACC)n Simple_repeat Simple_repeat 2 28 0 204 97 0 0 chr5 7576797 7576828 -195508704 + (CCTG)n Simple_repeat Simple_repeat 3 33 0 513 47 0 0 chr5 7576962 7577026 -195508506 + (TCC)n Simple_repeat Simple_repeat 3 66 0 234 0 0 0 chr5 7577426 7577452 -195508080 + (CA)n Simple_repeat Simple_repeat 1 26 0 637 145 127 54 chr5 7577467 7577633 -195507899 - FRAM SINE Alu 0 176 1 396 0 0 0 chr5 7580696 7580740 -195504792 + (TC)n Simple_repeat Simple_repeat 1 44 0 21 57 0 0 chr5 7581319 7581354 -195504178 + AT_rich Low_complexity Low_complexity 1 35 0 220 286 0 26 chr5 7581533 7581610 -195503922 + (TATG)n Simple_repeat Simple_repeat 4 78 0 464 180 7 127 chr5 7582512 7582662 -195502870 + FLAM_C SINE Alu 2 133 0 369 0 0 0 chr5 7583192 7583233 -195502299 + (TG)n Simple_repeat Simple_repeat 2 42 0 300 183 0 0 chr5 7683665 7683725 -195401807 + L1ME1 LINE L1 5613 5672 -494 5160 39 2 5 chr5 7683748 7684382 -195401150 + L1PA5 LINE L1 5523 6154 0 811 275 67 55 chr5 7684382 7684818 -195400714 + L1ME1 LINE L1 5652 6092 -74 287 230 143 8 chr5 7684748 7684874 -195400658 + L1MA10 LINE L1 6185 6327 -7 * 882 224 36 29 chr5 7685701 7685982 -195399550 - L1MC3 LINE L1 0 7785 7503 287 343 34 14 chr5 7686009 7686216 -195399316 - L3 LINE CR1 -188 1389 1179 190 382 0 0 chr5 7686567 7686618 -195398914 - L3 LINE CR1 -2 1575 1522 4226 95 2 0 chr5 7686618 7687209 -195398323 + L1PA13 LINE L1 5572 6163 0 190 382 0 0 chr5 7687209 7687225 -195398307 - L3 LINE CR1 -54 1523 1508 2172 216 16 26 chr5 7687867 7688372 -195397160 - MER89 LTR ERV1 0 559 60 180 135 0 0 chr5 7689170 7689207 -195396325 + (TGAA)n Simple_repeat Simple_repeat 4 40 0 640 264 146 59 chr5 7689434 7689908 -195395624 - LTR33A LTR ERVL -2 521 7 380 197 0 0 chr5 7690860 7690931 -195394601 + L1MC3 LINE L1 7232 7302 -483 257 105 0 0 chr5 7690931 7690969 -195394563 + Alu SINE Alu 1 38 -264 1558 143 13 0 chr5 7690969 7691207 -195394325 + AluSg/x SINE Alu 69 309 -1 210 71 0 0 chr5 7691209 7691237 -195394295 + (GGAA)n Simple_repeat Simple_repeat 3 30 0 1120 197 0 13 chr5 7691237 7691470 -195394062 + L1MC3 LINE L1 7297 7526 -259 645 237 6 6 chr5 7692442 7692615 -195392917 + L1MA10 LINE L1 6161 6333 -1 2068 249 61 5 chr5 7693370 7693945 -195391587 + MLT1E2 LTR MaLR 13 619 -7 28 78 0 29 chr5 7694260 7694363 -195391169 + AT_rich Low_complexity Low_complexity 1 100 0 535 54 14 0 chr5 7699320 7699406 -195386126 - LTR12 LTR ERV1 -24 690 307 2815 134 22 146 chr5 7699410 7700196 -195385336 - LTR12 LTR ERV1 0 688 1 603 226 31 51 chr5 7700374 7700666 -195384866 - pTR5 LTR ERV1 -1410 1028 743 2078 132 0 3 chr5 7701849 7702136 -195383396 + AluSq SINE Alu 1 286 -27 618 266 86 57 chr5 7702396 7702761 -195382771 + MLT1G LTR MaLR 5 395 -195 187 354 25 56 chr5 7703506 7703667 -195381865 + L2 LINE L2 2660 2815 -499 375 245 141 52 chr5 7703823 7704072 -195381460 + L1M4 LINE L1 5101 5371 -775 204 208 42 0 chr5 7704593 7704641 -195380891 + (TATATG)n Simple_repeat Simple_repeat 4 53 0 2428 86 0 0 chr5 7705711 7706012 -195379520 - AluY SINE Alu -10 301 1 8719 194 17 10 chr5 7706351 7709490 -195376042 - L1PB3 LINE L1 -2 6209 3046 5754 188 32 15 chr5 7709495 7711844 -195373688 - L1PB3 LINE L1 -3753 2450 5 1415 241 34 36 chr5 7711813 7712227 -195373305 - L1PBa LINE L1 -5224 980 568 * 416 101 217 0 chr5 7712277 7712346 -195373186 - THE1B LTR MaLR -280 84 1 845 304 77 29 chr5 7712346 7712929 -195372603 - L1PBa LINE L1 -6085 778 168 2477 101 2 78 chr5 7713143 7713551 -195371981 + MER51B LTR ERV1 1 377 0 351 371 83 19 chr5 7713689 7713953 -195371579 - L2 LINE L2 -9 3263 2983 217 360 105 35 chr5 7714872 7715044 -195370488 + MIR3 SINE MIR 16 199 -9 613 271 81 9 chr5 7715136 7715357 -195370175 - MIR SINE MIR 0 262 26 2173 120 18 20 chr5 7715622 7715964 -195369568 + MER61A LTR ERV1 3 343 0 25 31 0 0 chr5 7717822 7717854 -195367678 + AT_rich Low_complexity Low_complexity 1 32 0 201 154 0 0 chr5 7717990 7718029 -195367503 + (TG)n Simple_repeat Simple_repeat 2 40 0 2011 180 34 24 chr5 7718104 7718393 -195367139 - MSTA LTR MaLR -6 422 126 1326 154 57 124 chr5 7718393 7718626 -195366906 - THE1C LTR MaLR 0 375 179 1878 121 23 4 chr5 7718626 7718891 -195366641 + AluSq SINE Alu 30 299 -14 1326 154 57 124 chr5 7718891 7719059 -195366473 - THE1C LTR MaLR -196 179 1 2011 180 34 24 chr5 7719059 7719186 -195366346 - MSTA LTR MaLR -302 126 2 3805 257 37 37 chr5 7719186 7719554 -195365978 + L1MC1 LINE L1 2526 2893 -3253 1477 151 46 0 chr5 7719554 7719838 -195365694 + L1MA3 LINE L1 6007 6303 -2 3805 257 37 37 chr5 7719838 7721149 -195364383 + L1MC1 LINE L1 2893 4208 -1938 2516 146 41 2 chr5 7721149 7721561 -195363971 - MSTA LTR MaLR 0 428 1 3805 257 37 37 chr5 7721561 7721602 -195363930 + L1MC1 LINE L1 4207 4247 -1899 * 4371 222 54 7 chr5 7721598 7723295 -195362237 + L1MC1 LINE L1 4533 6314 -19 736 203 0 0 chr5 7723383 7723516 -195362016 - FLAM_A SINE Alu 0 133 1 1737 185 125 10 chr5 7723956 7724340 -195361192 - MSTA LTR MaLR 0 428 1 8626 165 12 35 chr5 7724340 7725955 -195359577 - MSTA-int LTR MaLR 0 1580 3 1730 165 132 26 chr5 7725957 7726344 -195359188 - MSTA LTR MaLR 0 428 1 626 314 83 31 chr5 7726738 7727158 -195358374 + L1MC/D LINE L1 354 795 -5926 246 270 124 0 chr5 7727231 7727320 -195358212 - L2 LINE L2 -869 2445 2346 3542 160 50 21 chr5 7727336 7728037 -195357495 - MER50 LTR ERV1 -13 721 1 220 291 13 25 chr5 7728038 7728117 -195357415 - L2 LINE L2 -991 2323 2246 * 237 325 98 41 chr5 7728111 7728305 -195357227 + L2 LINE L2 3008 3212 -101 4454 166 13 1 chr5 7728325 7729147 -195356385 - L1PA16 LINE L1 -6 6160 5329 407 302 41 18 chr5 7729437 7729606 -195355926 + L1MC/D LINE L1 1646 1818 -4722 249 297 24 36 chr5 7729610 7729775 -195355757 + L1MC/D LINE L1 2005 2167 -4554 343 282 64 11 chr5 7730037 7730225 -195355307 + L1MC/D LINE L1 5359 5556 -984 5430 168 22 6 chr5 7730232 7732203 -195353329 + L1PB1 LINE L1 4150 6151 0 572 193 135 66 chr5 7732219 7732463 -195353069 + MER2 DNA MER2_type 85 345 0 4383 170 45 8 chr5 7732465 7733485 -195352047 + L1MA7 LINE L1 5228 6286 -5 389 328 48 39 chr5 7733500 7733729 -195351803 + L1MC/D LINE L1 5960 6190 -2012 242 248 92 43 chr5 7734060 7734201 -195351331 - L1MC/D LINE L1 -721 6107 5960 1779 121 19 29 chr5 7734379 7734686 -195350846 - L1PB1 LINE L1 -8 6143 5840 6156 127 10 52 chr5 7734687 7735787 -195349745 - THE1B-int LTR MaLR -526 1054 1 1840 165 73 3 chr5 7735787 7736127 -195349405 - THE1B LTR MaLR 0 364 1 2193 201 2 16 chr5 7736127 7736644 -195348888 - L1 LINE L1 -1729 4417 3908 5445 234 13 2 chr5 7736660 7738098 -195347434 + L1 LINE L1 2422 3875 -2271 377 197 0 0 chr5 7738099 7738170 -195347362 - MER2 DNA MER2_type -244 101 31 4413 244 89 16 chr5 7738192 7739399 -195346133 - L1MC/D LINE L1 -920 5812 4694 1008 94 29 0 chr5 7739399 7739569 -195345963 + CT-rich Low_complexity Low_complexity 1 175 0 4413 244 89 16 chr5 7739569 7741427 -195344105 - L1MC/D LINE L1 -2038 4694 2424 3753 281 27 23 chr5 7741561 7743124 -195342408 - L1MC/D LINE L1 -4516 2137 935 235 338 0 15 chr5 7743170 7743238 -195342294 - L1M3de LINE L1 -6309 344 278 413 327 19 55 chr5 7743741 7744152 -195341380 - L1M3de LINE L1 -5638 1015 572 749 223 11 11 chr5 7744799 7744974 -195340558 + MER20 DNA MER1_type 45 219 0 879 253 98 7 chr5 7745261 7745566 -195339966 - L1 LINE L1 -1916 4230 3898 1943 205 42 34 chr5 7745569 7745859 -195339673 + L1MA9 LINE L1 5489 5786 -526 249 83 0 0 chr5 7745859 7745895 -195339637 + (TG)n Simple_repeat Simple_repeat 2 37 0 1943 205 42 34 chr5 7745895 7746101 -195339431 + L1MA9 LINE L1 5786 5989 -323 2637 137 24 9 chr5 7748144 7748566 -195336966 - MSTA LTR MaLR 0 428 1 505 303 104 66 chr5 7748675 7749277 -195336255 - L1MCa LINE L1 -4579 2028 1203 939 246 123 81 chr5 7749316 7749834 -195335698 + MLT1G3 LTR MaLR 1 526 -4 379 335 62 52 chr5 7749883 7750208 -195335324 - L1MCa LINE L1 -5078 1338 1011 261 294 96 7 chr5 7751378 7751524 -195334008 + HAL1 LINE L1 45 203 -2304 1945 148 7 3 chr5 7751743 7752053 -195333479 - AluSx SINE Alu -1 311 1 585 178 23 11 chr5 7752133 7752307 -195333225 + GA-rich Low_complexity Low_complexity 1 176 0 301 194 56 56 chr5 7753221 7753329 -195332203 - L1ME LINE L1 -309 5812 5705 364 112 45 79 chr5 7753337 7753426 -195332106 - L1MA7 LINE L1 0 6291 6206 367 270 85 18 chr5 7754814 7754979 -195330553 + MLT1H LTR MaLR 57 210 -339 941 166 0 143 chr5 7755605 7755828 -195329704 + AluJb SINE Alu 84 274 -38 705 196 23 6 chr5 7755830 7756156 -195329376 + GA-rich Low_complexity Low_complexity 1 331 0 1900 198 8 6 chr5 7756623 7756987 -195328545 - MLT1A1 LTR MaLR 0 365 1 347 281 79 26 chr5 7757254 7757368 -195328164 + L2 LINE L2 3193 3312 -1 3082 73 7 0 chr5 7757966 7758377 -195327155 + L1PA7 LINE L1 5740 6153 -1 266 321 50 25 chr5 7758428 7758587 -195326945 - MIR SINE MIR -10 252 90 453 226 21 153 chr5 7758970 7759155 -195326377 - Zaphod DNA AcHobo -2 4029 3908 1469 186 116 3 chr5 7759155 7759482 -195326050 + MLT1A1 LTR MaLR 1 364 -1 453 226 21 153 chr5 7759482 7759636 -195325896 - Zaphod DNA AcHobo -123 3908 3735 805 217 76 38 chr5 7759757 7759869 -195325663 - Zaphod DNA AcHobo -3029 1002 896 2098 127 0 16 chr5 7759869 7760183 -195325349 + AluSx SINE Alu 1 309 -3 805 217 76 38 chr5 7760183 7760544 -195324988 - Zaphod DNA AcHobo -3135 896 511 190 308 0 19 chr5 7762185 7762237 -195323295 - L2 LINE L2 -15 3257 3207 393 312 162 34 chr5 7762364 7762990 -195322542 - L2 LINE L2 -137 3176 2462 536 368 51 21 chr5 7763046 7763758 -195321774 + L2 LINE L2 2361 3093 -220 2276 108 7 0 chr5 7764321 7764627 -195320905 + AluSg SINE Alu 1 308 -2 2045 105 24 14 chr5 7765147 7765442 -195320090 + AluSx SINE Alu 11 308 -4 252 0 0 0 chr5 7765874 7765902 -195319630 + (TTA)n Simple_repeat Simple_repeat 3 30 0 7225 21 0 3 chr5 7765906 7767118 -195318414 - L1PA4 LINE L1 -20 6135 4927 1871 17 13 0 chr5 7767116 7767349 -195318183 - L1PA4 LINE L1 -1708 4438 4203 * 194 380 87 39 chr5 7769096 7769325 -195316207 + MIR SINE MIR 8 247 -15 2077 140 0 0 chr5 7769642 7769950 -195315582 - AluSx SINE Alu -1 311 4 238 237 53 0 chr5 7770027 7770103 -195315429 - L1ME1 LINE L1 -23 6143 6064 242 328 158 28 chr5 7770417 7770664 -195314868 - L3 LINE CR1 -8 1569 1291 21 36 0 0 chr5 7770725 7770753 -195314779 + AT_rich Low_complexity Low_complexity 1 28 0 934 266 145 0 chr5 7770771 7771060 -195314472 - LTR40a LTR ERVL -187 332 2 1190 213 55 22 chr5 7771826 7772219 -195313313 + MER54B LTR ERVL 488 793 0 22 0 0 0 chr5 7774548 7774570 -195310962 + AT_rich Low_complexity Low_complexity 1 22 0 949 152 81 113 chr5 7775468 7775777 -195309755 - AluJo SINE Alu -2 300 2 263 28 28 0 chr5 7775802 7775838 -195309694 + (TAGA)n Simple_repeat Simple_repeat 4 40 0 322 245 6 6 chr5 7775902 7776065 -195309467 + (TA)n Simple_repeat Simple_repeat 2 164 0 2344 111 13 21 chr5 7776146 7776524 -195309008 + THE1C LTR MaLR 1 375 0 4922 55 19 0 chr5 7776812 7777433 -195308099 + L1PA8 LINE L1 5536 6168 -4 1638 172 22 0 chr5 7777521 7777831 -195307701 + AluSx SINE Alu 4 319 0 26 50 0 0 chr5 7777841 7777881 -195307651 + AT_rich Low_complexity Low_complexity 1 40 0 423 312 84 5 chr5 7777900 7778102 -195307430 - MIR SINE MIR -11 251 34 1199 140 82 27 chr5 7778106 7778363 -195307169 - THE1C LTR MaLR 0 375 105 8384 141 54 27 chr5 7778363 7779320 -195306212 - THE1B-int LTR MaLR -9 1571 641 2047 156 11 32 chr5 7779320 7779692 -195305840 - THE1B LTR MaLR 0 364 1 10538 125 11 2 chr5 7779692 7781257 -195304275 - THE1B-int LTR MaLR 0 1580 1 2131 127 11 50 chr5 7781257 7781636 -195303896 - THE1B LTR MaLR 0 364 1 8384 141 54 27 chr5 7781636 7782207 -195303325 - THE1B-int LTR MaLR -938 642 1 1863 132 76 20 chr5 7782207 7782562 -195302970 - THE1C LTR MaLR 0 375 1 206 297 36 9 chr5 7782731 7782842 -195302690 + GA-rich Low_complexity Low_complexity 5 118 0 1319 219 45 31 chr5 7782975 7783335 -195302197 - MLT1A2 LTR MaLR -5 462 5 3426 104 40 2 chr5 7783560 7784081 -195301451 + L1PA13 LINE L1 5618 6158 -5 354 143 0 0 chr5 7784843 7784906 -195300626 - MLT2B1 LTR ERVL 0 520 458 215 180 33 0 chr5 7784913 7784974 -195300558 + (TAGA)n Simple_repeat Simple_repeat 4 66 0 414 196 14 14 chr5 7784989 7785137 -195300395 + (TAGA)n Simple_repeat Simple_repeat 4 151 0 1339 233 23 19 chr5 7785137 7785564 -195299968 - MLT2B1 LTR ERVL -42 478 1 213 219 0 0 chr5 7785629 7785702 -195299830 + (CA)n Simple_repeat Simple_repeat 1 73 0 2500 66 0 0 chr5 7786027 7786330 -195299202 + AluY SINE Alu 1 303 -8 488 172 66 0 chr5 7786384 7786506 -195299026 + L1MA7 LINE L1 6162 6291 0 1019 161 62 45 chr5 7787494 7787737 -195297795 - MER2 DNA MER2_type -51 294 48 195 42 0 0 chr5 7787755 7787779 -195297753 + (TG)n Simple_repeat Simple_repeat 1 24 0 343 278 56 9 chr5 7787811 7787919 -195297613 + MIR SINE MIR 77 189 -73 181 402 0 12 chr5 7788100 7788182 -195297350 - MER5A DNA MER1_type -102 87 7 480 273 18 0 chr5 7788233 7788343 -195297189 + MER5B DNA MER1_type 7 118 -60 742 195 52 108 chr5 7788520 7788864 -195296668 - L1MC3 LINE L1 0 7785 7461 4868 148 30 24 chr5 7788897 7789950 -195295582 - L1PA15 LINE L1 -4 6161 5104 2265 189 8 8 chr5 7789959 7790456 -195295076 + L1PA15 LINE L1 4598 5094 -1052 * 2290 210 56 26 chr5 7790455 7791098 -195294434 - L1MC3 LINE L1 -311 7474 6813 244 36 0 125 chr5 7791540 7791596 -195293936 + (T)n Simple_repeat Simple_repeat 1 49 0 4156 0 0 0 chr5 7791596 7792056 -195293476 - L1HS LINE L1 0 6155 5696 * 11683 24 0 0 chr5 7792055 7793428 -195292104 + L1P LINE L1 3353 4725 -1421 2063 131 0 0 chr5 7793951 7794248 -195291284 + AluSx SINE Alu 1 297 -15 1052 226 8 25 chr5 7794335 7794574 -195290958 + AluJo SINE Alu 65 299 -13 220 156 44 0 chr5 7795068 7795113 -195290419 + GA-rich Low_complexity Low_complexity 2 48 0 7543 28 0 5 chr5 7796136 7797515 -195288017 - L1PA3 LINE L1 0 6155 4818 5913 26 0 0 chr5 7797515 7798216 -195287316 + L1PA3 LINE L1 4143 4843 -1303 1429 192 73 0 chr5 7798519 7798821 -195286711 + L1MC1 LINE L1 6008 6331 -2 22 35 0 0 chr5 7799054 7799083 -195286449 + AT_rich Low_complexity Low_complexity 1 29 0 1541 227 51 17 chr5 7799581 7799688 -195285844 + MLT1A1 LTR MaLR 1 103 -262 2225 116 33 25 chr5 7799688 7800049 -195285483 - THE1B LTR MaLR 0 364 1 1541 227 51 17 chr5 7800049 7800294 -195285238 + MLT1A1 LTR MaLR 103 365 0 336 317 36 48 chr5 7800867 7801076 -195284456 - MIR SINE MIR -10 252 42 23 33 0 0 chr5 7801447 7801477 -195284055 + AT_rich Low_complexity Low_complexity 1 30 0 2513 89 10 79 chr5 7801496 7801901 -195283631 + MER51B LTR ERV1 1 377 0 15070 64 16 8 chr5 7802569 7804498 -195281034 + HERVL LTR ERVL 3368 5310 -344 245 247 0 13 chr5 7804501 7804578 -195280954 + (TATATG)n Simple_repeat Simple_repeat 5 80 0 729 318 108 31 chr5 7804635 7805151 -195280381 + L2 LINE L2 1757 2312 -1002 219 36 0 0 chr5 7805837 7805865 -195279667 + (TTA)n Simple_repeat Simple_repeat 3 30 0 43376 46 4 1 chr5 7805865 7811984 -195273548 - L1PA4 LINE L1 -18 6137 1 22 0 0 0 chr5 7812911 7812933 -195272599 + AT_rich Low_complexity Low_complexity 1 22 0 231 146 0 0 chr5 7814405 7814446 -195271086 + (TG)n Simple_repeat Simple_repeat 2 42 0 243 0 0 0 chr5 7814517 7814544 -195270988 + (TG)n Simple_repeat Simple_repeat 2 28 0 558 240 0 0 chr5 7815739 7815889 -195269643 + CT-rich Low_complexity Low_complexity 3 152 0 253 88 0 0 chr5 7815890 7815924 -195269608 + (TC)n Simple_repeat Simple_repeat 2 35 0 1329 223 62 30 chr5 7817715 7817875 -195267657 + MLT1B LTR MaLR 6 159 -231 2186 100 7 16 chr5 7817875 7818184 -195267348 + AluSc SINE Alu 1 306 -3 1329 223 62 30 chr5 7818184 7818396 -195267136 + MLT1B LTR MaLR 159 390 0 198 261 171 27 chr5 7818430 7818541 -195266991 - L3 LINE CR1 -263 1314 1188 1758 175 25 22 chr5 7818706 7819072 -195266460 - THE1C LTR MaLR -4 371 5 827 317 53 36 chr5 7820806 7821279 -195264253 + MLT1H LTR MaLR 15 495 -54 2406 83 0 16 chr5 7822445 7822757 -195262775 - AluSp SINE Alu -6 307 1 303 353 22 0 chr5 7823411 7823550 -195261982 + L1ME LINE L1 5527 5668 -453 620 224 162 25 chr5 7823830 7824287 -195261245 + L1M4 LINE L1 4899 5429 -752 354 316 14 29 chr5 7824553 7824692 -195260840 - MIR SINE MIR -19 243 107 507 260 0 0 chr5 7824984 7825161 -195260371 + (CTA)n Simple_repeat Simple_repeat 2 178 0 222 304 0 0 chr5 7825185 7825297 -195260235 + (CTA)n Simple_repeat Simple_repeat 1 112 0 2175 225 89 20 chr5 7825297 7825958 -195259574 + Tigger7 DNA MER2_type 1 2573 -14 255 223 160 11 chr5 7826010 7826104 -195259428 - MIR SINE MIR -18 244 137 318 294 55 14 chr5 7826370 7826516 -195259016 + MLT1I LTR MaLR 258 409 0 1836 132 92 7 chr5 7826762 7827043 -195258489 + AluSx SINE Alu 2 306 -6 186 333 30 0 chr5 7827418 7827484 -195258048 - L2 LINE L2 0 3272 3205 22 0 0 0 chr5 7827486 7827508 -195258024 + AT_rich Low_complexity Low_complexity 1 22 0 1216 221 12 24 chr5 7828357 7828610 -195256922 + Tigger3(Golem) DNA MER2_type 2 251 -2778 6547 41 5 0 chr5 7828775 7829583 -195255949 - L1PA4 LINE L1 -820 5326 4515 6930 26 1 1 chr5 7829583 7830394 -195255138 + L1PA4 LINE L1 5339 6154 -1 299 279 60 67 chr5 7831370 7831639 -195253893 + MLT1J LTR MaLR 243 509 -2 26 30 0 0 chr5 7832778 7832811 -195252721 + AT_rich Low_complexity Low_complexity 1 33 0 2971 132 25 36 chr5 7832824 7832945 -195252587 + L1P4 LINE L1 5213 5334 -831 1769 102 87 26 chr5 7832945 7833231 -195252301 + AluSp SINE Alu 5 306 0 2971 132 25 36 chr5 7833231 7833649 -195251883 + L1P4 LINE L1 5334 5758 -407 235 189 19 0 chr5 7833652 7833705 -195251827 + L1PA16 LINE L1 6113 6166 0 387 292 42 28 chr5 7833754 7833981 -195251551 + L1MDb LINE L1 1152 1392 -5004 243 110 64 18 chr5 7833985 7834094 -195251438 + (TA)n Simple_repeat Simple_repeat 1 114 0 1944 118 11 0 chr5 7834262 7834534 -195250998 + AluSx SINE Alu 1 275 -37 360 265 63 63 chr5 7834563 7834752 -195250780 + L1MDb LINE L1 1540 1728 -4678 2142 120 10 98 chr5 7837763 7838162 -195247370 - THE1B LTR MaLR 0 364 1 418 263 10 0 chr5 7838977 7839076 -195246456 + MLT2E LTR ERVL 53 152 -476 1605 142 103 14 chr5 7839388 7839669 -195245863 - AluSx SINE Alu -6 306 1 2670 51 0 0 chr5 7840124 7840435 -195245097 + AluY SINE Alu 1 311 0 1869 291 25 32 chr5 7841145 7841868 -195243664 + L1MEc LINE L1 36 753 -5643 2541 58 9 6 chr5 7842675 7843002 -195242530 - L1PA7 LINE L1 -5 6149 5822 8527 36 0 0 chr5 7843598 7845382 -195240150 - L1PA5 LINE L1 -13 6141 4358 22 0 0 0 chr5 7845977 7845999 -195239533 + AT_rich Low_complexity Low_complexity 1 22 0 221 297 116 43 chr5 7847323 7847461 -195238071 - MIR SINE MIR -49 213 66 180 0 0 0 chr5 7848427 7848447 -195237085 + (T)n Simple_repeat Simple_repeat 1 20 0 2131 65 25 11 chr5 7849927 7850203 -195235329 - AluY SINE Alu -17 294 15 888 58 0 16 chr5 7851254 7851375 -195234157 - L1PA6 LINE L1 0 6154 6036 309 26 0 0 chr5 7852750 7852788 -195232744 + (TTTG)n Simple_repeat Simple_repeat 2 39 0 1264 226 25 14 chr5 7852792 7853071 -195232461 - AluJo SINE Alu -30 282 1 2068 224 154 8 chr5 7853814 7854413 -195231119 + MER76 LTR ERV 2 687 -1 2670 239 156 20 chr5 7854738 7855743 -195229789 + L1ME1 LINE L1 5019 6161 -5 442 329 103 26 chr5 7855914 7856224 -195229308 - L2 LINE L2 -4 3309 2976 1677 99 13 115 chr5 7856371 7856711 -195228821 - AluSx SINE Alu 0 308 1 484 15 31 0 chr5 7857529 7857594 -195227938 + (TCTA)n Simple_repeat Simple_repeat 4 70 0 2023 141 0 0 chr5 7857792 7858075 -195227457 - AluSx SINE Alu -29 283 1 546 169 0 0 chr5 7858101 7858190 -195227342 + MSTB1 LTR MaLR 294 382 -50 22 0 0 0 chr5 7858211 7858233 -195227299 + AT_rich Low_complexity Low_complexity 1 22 0 512 312 23 23 chr5 7858625 7858840 -195226692 - MIR SINE MIR 0 262 48 23 33 0 0 chr5 7859739 7859769 -195225763 + AT_rich Low_complexity Low_complexity 1 30 0 1476 257 31 21 chr5 7860462 7861073 -195224459 + L1M4 LINE L1 2505 3121 -3025 188 342 72 18 chr5 7861239 7861350 -195224182 - MIR3 SINE MIR -13 195 79 26 88 0 0 chr5 7862490 7862558 -195222974 + AT_rich Low_complexity Low_complexity 1 68 0 1560 211 6 3 chr5 7863910 7864247 -195221285 - L1 LINE L1 -1112 5034 4697 4512 176 37 11 chr5 7864250 7864931 -195220601 + L1PB4 LINE L1 5068 5788 -368 184 59 59 0 chr5 7864931 7864965 -195220567 + (TA)n Simple_repeat Simple_repeat 1 36 0 4512 176 37 11 chr5 7864965 7865341 -195220191 + L1PB4 LINE L1 5788 6153 -3 422 326 77 11 chr5 7865728 7866246 -195219286 + MLT1G1 LTR MaLR 5 588 -2 3441 309 83 28 chr5 7868180 7868486 -195217046 + L2 LINE L2 1132 1420 -1894 1993 140 46 6 chr5 7868486 7868836 -195216696 - THE1B LTR MaLR 0 364 1 3441 309 83 28 chr5 7868836 7869385 -195216147 + L2 LINE L2 1420 1937 -1377 1732 181 40 27 chr5 7869385 7869755 -195215777 + THE1C LTR MaLR 1 375 0 3441 309 83 28 chr5 7869755 7870495 -195215037 + L2 LINE L2 1937 2816 -498 22 70 0 0 chr5 7870543 7870586 -195214946 + AT_rich Low_complexity Low_complexity 1 43 0 21 57 0 0 chr5 7870719 7870754 -195214778 + AT_rich Low_complexity Low_complexity 1 35 0 246 169 89 81 chr5 7871914 7872038 -195213494 - MER54B LTR ERVL -330 463 339 240 319 83 56 chr5 7873280 7873424 -195212108 - L2 LINE L2 -559 2755 2608 1731 249 35 5 chr5 7873653 7874083 -195211449 - MER68 LTR ERV1 0 562 120 2278 168 5 10 chr5 7874204 7874597 -195210935 - ERVL-B3 LTR ERVL -335 5429 5039 2150 151 70 51 chr5 7874595 7875026 -195210506 - ERVL-B3 LTR ERVL -2924 2840 2402 * 3956 226 13 41 chr5 7875030 7876045 -195209487 - MER45B DNA AcHobo -54 986 1 510 85 0 24 chr5 7876174 7876256 -195209276 + L1PA6 LINE L1 6075 6154 0 565 221 17 88 chr5 7877028 7877209 -195208323 + MER68 LTR ERV1 30 197 -365 3432 208 38 5 chr5 7877209 7878534 -195206998 - ERVL-B3 LTR ERVL -3359 2405 996 537 82 0 0 chr5 7878535 7878608 -195206924 - L1PA13 LINE L1 -8 6155 6083 2544 248 61 24 chr5 7878615 7879105 -195206427 - ERVL-B3 LTR ERVL -4754 731 261 2102 191 33 5 chr5 7879105 7879525 -195206007 - MSTB1 LTR MaLR 0 432 1 2544 248 61 24 chr5 7879525 7879538 -195205994 - ERVL-B3 LTR ERVL -5224 261 250 1824 229 46 64 chr5 7879538 7880102 -195205430 - MLT2B3 LTR ERVL 0 554 1 2544 248 61 24 chr5 7880102 7880329 -195205203 - ERVL-B3 LTR ERVL -5235 250 4 2126 161 131 47 chr5 7880329 7880839 -195204693 - MLT2B3 LTR ERVL -1 553 1 587 275 17 78 chr5 7881699 7881994 -195203538 - L1MD2 LINE L1 -13 6346 6070 566 261 6 28 chr5 7882012 7882188 -195203344 - L1MD2 LINE L1 -362 5997 5826 255 244 139 23 chr5 7882413 7882499 -195203033 - L2 LINE L2 -15 3298 3203 203 152 22 0 chr5 7882515 7882561 -195202971 + GA-rich Low_complexity Low_complexity 1 47 0 219 88 0 0 chr5 7883399 7883433 -195202099 + (TTTTTG)n Simple_repeat Simple_repeat 2 35 0 603 234 21 0 chr5 7883653 7883794 -195201738 + MER20 DNA MER1_type 76 219 0 1317 216 65 23 chr5 7883866 7884217 -195201315 - MLT1A2 LTR MaLR -4 370 5 223 343 33 47 chr5 7885044 7885257 -195200275 + L2 LINE L2 1693 1902 -1412 210 240 40 0 chr5 7885808 7885858 -195199674 + MER91 DNA MER1_type 75 126 -14 315 320 135 38 chr5 7885872 7886573 -195198959 + L2 LINE L2 2469 3262 -10 210 71 0 0 chr5 7888110 7888138 -195197394 + (TA)n Simple_repeat Simple_repeat 2 29 0 22 56 0 0 chr5 7889100 7889136 -195196396 + AT_rich Low_complexity Low_complexity 1 36 0 30 45 0 0 chr5 7889255 7889299 -195196233 + AT_rich Low_complexity Low_complexity 1 44 0 26 30 0 0 chr5 7890298 7890331 -195195201 + AT_rich Low_complexity Low_complexity 1 33 0 23 0 0 0 chr5 7890368 7890391 -195195141 + AT_rich Low_complexity Low_complexity 1 23 0 292 146 135 67 chr5 7890610 7890699 -195194833 + L1PA16 LINE L1 6072 6166 0 248 28 56 0 chr5 7891705 7891741 -195193791 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 423 342 53 22 chr5 7891746 7891971 -195193561 + MIR SINE MIR 28 259 -3 860 351 114 24 chr5 7891979 7893020 -195192512 - L2 LINE L2 -35 3278 2116 270 0 0 0 chr5 7893020 7893050 -195192482 + (CAA)n Simple_repeat Simple_repeat 2 31 0 860 351 114 24 chr5 7893050 7893191 -195192341 - L2 LINE L2 -1197 2116 1989 1076 76 0 0 chr5 7893197 7893329 -195192203 + AluY SINE Alu 3 134 -177 2449 71 0 3 chr5 7893331 7893639 -195191893 + AluY SINE Alu 3 309 -2 303 204 151 11 chr5 7893645 7893738 -195191794 - L2 LINE L2 -1331 1983 1878 21 0 0 0 chr5 7894348 7894369 -195191163 + AT_rich Low_complexity Low_complexity 1 21 0 1196 213 84 58 chr5 7894434 7894814 -195190718 + MLT1B LTR MaLR 1 390 0 26 93 0 0 chr5 7894843 7894918 -195190614 + AT_rich Low_complexity Low_complexity 1 75 0 231 308 57 6 chr5 7896072 7896231 -195189301 + L1M4 LINE L1 4534 4700 -1446 180 300 20 0 chr5 7896345 7896395 -195189137 + MIR SINE MIR 8 58 -204 844 220 38 19 chr5 7896861 7897070 -195188462 + MER20 DNA MER1_type 7 219 0 2258 64 16 13 chr5 7897275 7897589 -195187943 - L1PA5 LINE L1 -1 6153 5839 1076 161 0 0 chr5 7899040 7899202 -195186330 - AluSg/x SINE Alu -14 298 137 1905 114 54 14 chr5 7899230 7899527 -195186005 - AluSc SINE Alu 0 309 1 234 227 61 0 chr5 7900201 7900267 -195185265 - MER5B DNA MER1_type 0 178 109 24 0 0 0 chr5 7900368 7900392 -195185140 + AT_rich Low_complexity Low_complexity 1 24 0 4055 127 43 1 chr5 7901524 7902263 -195183269 - L1PA16 LINE L1 0 6163 5355 588 107 0 0 chr5 7902263 7902347 -195183185 - AluS SINE Alu -228 84 1 1675 215 67 0 chr5 7902351 7902797 -195182735 - L1PA16 LINE L1 -783 5363 4888 296 309 103 7 chr5 7902927 7903063 -195182469 - MIR SINE MIR -61 201 53 235 258 21 86 chr5 7903095 7903188 -195182344 + L2 LINE L2 3169 3255 -17 224 333 15 68 chr5 7903466 7903598 -195181934 - L2 LINE L2 0 3272 3148 468 323 22 36 chr5 7903815 7904038 -195181494 + MIR SINE MIR 5 224 -38 1520 235 11 16 chr5 7905014 7905392 -195180140 + L1MD1 LINE L1 5740 6115 -127 320 266 11 57 chr5 7906271 7906448 -195179084 + L1M4 LINE L1 3687 3855 -2291 200 294 0 16 chr5 7906456 7906582 -195178950 + (CATA)n Simple_repeat Simple_repeat 1 124 0 256 236 18 0 chr5 7906765 7906875 -195178657 + (TA)n Simple_repeat Simple_repeat 1 112 0 390 344 59 43 chr5 7906995 7907370 -195178162 - L1MC/D LINE L1 -2000 5808 5428 32 26 0 0 chr5 7908124 7908163 -195177369 + AT_rich Low_complexity Low_complexity 1 39 0 4825 165 14 19 chr5 7908647 7909639 -195175893 + L1PA16 LINE L1 5151 6137 -29 2205 170 29 12 chr5 7909641 7910031 -195175501 + MSTA LTR MaLR 4 403 -25 15867 66 10 0 chr5 7910031 7912923 -195172609 - L1PA6 LINE L1 0 6154 3246 2205 170 29 12 chr5 7912923 7912950 -195172582 + MSTA LTR MaLR 403 428 0 3435 118 84 16 chr5 7913767 7914317 -195171215 - LTR18B LTR ERVL -27 587 1 1696 148 22 94 chr5 7914623 7914802 -195170730 + THE1C LTR MaLR 1 136 -239 2080 130 3 0 chr5 7914802 7915102 -195170430 - AluSq SINE Alu -12 301 1 1696 148 22 94 chr5 7915102 7915326 -195170206 + THE1C LTR MaLR 136 375 0 288 0 0 0 chr5 7916384 7916416 -195169116 + (CA)n Simple_repeat Simple_repeat 1 32 0 2130 151 81 3 chr5 7916427 7916810 -195168722 - MLT2C2 LTR ERVL -48 416 4 256 247 78 13 chr5 7916814 7916891 -195168641 - MIR SINE MIR -150 112 31 1080 228 30 0 chr5 7917170 7917407 -195168125 - L1PB4 LINE L1 -1191 4955 4712 4042 190 23 8 chr5 7917410 7918493 -195167039 + L1PB4 LINE L1 4953 6047 -109 2192 207 47 11 chr5 7918516 7919052 -195166480 - L1MB7 LINE L1 -70 6612 6058 513 220 97 113 chr5 7919052 7919308 -195166224 - MLT1D LTR MaLR -196 271 1 374 229 28 50 chr5 7919308 7919487 -195166045 - L1MB7 LINE L1 -2729 3915 3741 274 261 0 0 chr5 7919472 7919537 -195165995 - L1MB7 LINE L1 -6461 81 17 * 2116 80 0 0 chr5 7920843 7921119 -195164413 - AluY SINE Alu -4 307 32 678 149 53 0 chr5 7925175 7925289 -195160243 - L1PA15 LINE L1 -489 5676 5557 2831 124 16 2 chr5 7925289 7925741 -195159791 + L1PA15 LINE L1 5705 6163 -2 3714 52 2 0 chr5 7925821 7926286 -195159246 - L1PA5 LINE L1 -5 6149 5684 264 318 35 0 chr5 7927164 7927249 -195158283 + MIR SINE MIR 48 135 -127 2248 183 48 101 chr5 7927261 7927336 -195158196 + MLT2B3 LTR ERVL 2 79 -475 1106 71 0 22 chr5 7927336 7927519 -195158013 + (TG)n Simple_repeat Simple_repeat 2 180 0 2248 183 48 101 chr5 7927519 7927566 -195157966 + MLT2B3 LTR ERVL 79 127 -427 1118 67 11 11 chr5 7927566 7927746 -195157786 + (TG)n Simple_repeat Simple_repeat 1 180 0 2248 183 48 101 chr5 7927746 7928152 -195157380 + MLT2B3 LTR ERVL 127 500 -54 416 51 17 0 chr5 7928152 7928211 -195157321 + (TCTA)n Simple_repeat Simple_repeat 1 60 0 2248 183 48 101 chr5 7928211 7928264 -195157268 + MLT2B3 LTR ERVL 500 554 0 197 392 108 0 chr5 7928437 7928567 -195156965 + L2 LINE L2 3127 3270 -2 1447 39 6 0 chr5 7929079 7929257 -195156275 - L1PA4 LINE L1 -2 6153 5975 1578 180 20 8 chr5 7930514 7930925 -195154607 - L1M LINE L1 -743 5403 5008 * 1936 223 31 119 chr5 7930919 7931681 -195153851 + L1MA6 LINE L1 5424 6118 -182 25 31 0 0 chr5 7931788 7931820 -195153712 + AT_rich Low_complexity Low_complexity 1 32 0 203 208 0 19 chr5 7932128 7932181 -195153351 + (TTTAA)n Simple_repeat Simple_repeat 5 56 0 23 54 0 0 chr5 7933590 7933627 -195151905 + AT_rich Low_complexity Low_complexity 1 37 0 1929 187 37 8 chr5 7933798 7934177 -195151355 - MLT1B LTR MaLR 0 390 1 284 75 0 0 chr5 7934215 7934255 -195151277 - L1MA9 LINE L1 -39 6273 6234 478 78 0 111 chr5 7934255 7934294 -195151238 + MADE1 DNA Mariner 1 26 -54 1018 52 22 0 chr5 7934294 7934429 -195151103 - L1PA4 LINE L1 -1 6154 6017 478 78 0 111 chr5 7934429 7934479 -195151053 + MADE1 DNA Mariner 26 80 0 772 227 62 27 chr5 7934479 7934739 -195150793 - L1MA9 LINE L1 -83 6229 5961 844 61 0 0 chr5 7936197 7936311 -195149221 + L1PA4 LINE L1 6042 6155 0 452 312 144 10 chr5 7937267 7937565 -195147967 - LTR16A LTR ERVL -88 362 25 232 182 23 0 chr5 7937569 7937613 -195147919 - MLT2D LTR ERVL 0 554 510 1017 216 155 4 chr5 7937644 7937908 -195147624 - MLT2D LTR ERVL -19 395 92 1230 260 38 30 chr5 7939148 7939675 -195145857 + L1M4 LINE L1 4794 5324 -822 492 219 41 41 chr5 7941636 7941805 -195143727 + MER89 LTR ERV1 1 169 -390 1288 145 94 86 chr5 7942469 7942841 -195142691 - THE1C LTR MaLR 0 375 1 1809 227 45 16 chr5 7943810 7944255 -195141277 - MLT1C LTR MaLR -9 458 1 4667 193 10 8 chr5 7944368 7945285 -195140247 - MER49 LTR ERV1 0 923 5 21 82 0 0 chr5 7946850 7946899 -195138633 + AT_rich Low_complexity Low_complexity 1 49 0 419 243 27 18 chr5 7947069 7947180 -195138352 + MER81 DNA DNA 1 112 -2 1254 225 34 57 chr5 7948781 7949169 -195136363 - MER67C LTR ERV1 -8 506 168 2183 131 75 40 chr5 7949169 7949597 -195135935 - MER65A LTR ERV1 -2 443 1 1254 225 34 57 chr5 7949597 7949762 -195135770 - MER67C LTR ERV1 -346 168 1 224 167 21 0 chr5 7949904 7949952 -195135580 + (TA)n Simple_repeat Simple_repeat 1 49 0 225 65 0 0 chr5 7949968 7949999 -195135533 + (TC)n Simple_repeat Simple_repeat 2 32 0 263 273 107 9 chr5 7950883 7950998 -195134534 + MIR SINE MIR 31 138 -70 304 242 10 99 chr5 7952104 7952165 -195133367 - MIR SINE MIR -55 207 142 2203 225 87 21 chr5 7952165 7952774 -195132758 + MLT1E1 LTR MaLR 5 653 -1 304 242 10 99 chr5 7952774 7952874 -195132658 - MIR SINE MIR -120 142 59 229 300 0 12 chr5 7952975 7953055 -195132477 + (TA)n Simple_repeat Simple_repeat 1 79 0 415 338 44 44 chr5 7953137 7953405 -195132127 + L1M4 LINE L1 3544 3814 -2332 1545 180 47 68 chr5 7953405 7953759 -195131773 + LTR52 LTR ERVL 1 346 -75 261 0 0 0 chr5 7953759 7953788 -195131744 + (TG)n Simple_repeat Simple_repeat 2 30 0 1545 180 47 68 chr5 7953788 7953861 -195131671 + LTR52 LTR ERVL 346 419 -2 415 338 44 44 chr5 7953861 7953909 -195131623 + L1M4 LINE L1 3813 3860 -2286 272 212 30 20 chr5 7954331 7954430 -195131102 + (TATAA)n Simple_repeat Simple_repeat 5 104 0 197 86 57 0 chr5 7954465 7954500 -195131032 + (TCTA)n Simple_repeat Simple_repeat 1 37 0 364 241 0 0 chr5 7954721 7954808 -195130724 - MLT1A1 LTR MaLR 0 390 304 3782 66 23 7 chr5 7954947 7955589 -195129943 - L1PA7 LINE L1 -367 5787 5139 2828 59 6 0 chr5 7955589 7955938 -195129594 + L1PA7 LINE L1 5789 6146 -8 878 215 37 45 chr5 7956375 7956617 -195128915 - MLT1A1 LTR MaLR -125 240 1 218 132 19 0 chr5 7957670 7957723 -195127809 + (TG)n Simple_repeat Simple_repeat 1 54 0 228 342 111 8 chr5 7958412 7958529 -195127003 + MIR SINE MIR 18 146 -62 306 0 0 0 chr5 7958584 7958618 -195126914 + (TG)n Simple_repeat Simple_repeat 2 35 0 2029 144 46 25 chr5 7959608 7959975 -195125557 - THE1C LTR MaLR 0 375 1 278 194 14 0 chr5 7960071 7960143 -195125389 + CT-rich Low_complexity Low_complexity 1 73 0 265 271 90 66 chr5 7960213 7960335 -195125197 + MER63 DNA MER1_type 2 752 -84 229 238 62 12 chr5 7960335 7960415 -195125117 + MER63 DNA MER1_type 977 1060 0 202 344 0 33 chr5 7961568 7961719 -195123813 + G-rich Low_complexity Low_complexity 3 148 0 1580 150 48 107 chr5 7962116 7962556 -195122976 - MLT2D LTR ERVL 0 414 1 1728 209 105 38 chr5 7964451 7965030 -195120502 - L1MB8 LINE L1 -290 5888 5271 182 345 53 18 chr5 7965940 7966053 -195119479 - MIR SINE MIR -33 229 113 1675 214 33 28 chr5 7967761 7967956 -195117576 + MSTB1 LTR MaLR 5 198 -234 2371 84 3 3 chr5 7967956 7968255 -195117277 + AluSq SINE Alu 1 299 -14 1675 214 33 28 chr5 7968255 7968485 -195117047 + MSTB1 LTR MaLR 198 432 0 241 269 156 25 chr5 7968796 7968956 -195116576 - MIR SINE MIR -34 228 48 379 325 41 47 chr5 7969003 7969172 -195116360 + L2 LINE L2 3103 3270 -2 198 103 0 0 chr5 7970460 7970489 -195115043 + (TTA)n Simple_repeat Simple_repeat 2 30 0 22 35 0 0 chr5 7972331 7972360 -195113172 + AT_rich Low_complexity Low_complexity 1 29 0 1948 139 27 17 chr5 7972417 7972711 -195112821 - AluSx SINE Alu -15 297 1 194 258 237 10 chr5 7973095 7973192 -195112340 - L2 LINE L2 -2 3270 3152 329 261 11 22 chr5 7974232 7974324 -195111208 + L1MC4 LINE L1 6613 6703 -1339 643 92 55 9 chr5 7974328 7974546 -195110986 + (TA)n Simple_repeat Simple_repeat 1 228 0 559 26 37 90 chr5 7974572 7974761 -195110771 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 494 85 73 6 chr5 7974737 7974902 -195110630 + (TA)n Simple_repeat Simple_repeat 1 176 0 * 344 335 133 47 chr5 7975384 7975957 -195109575 - L2 LINE L2 -1145 2169 1548 1237 211 8 0 chr5 7976637 7976903 -195108629 + L1MD3 LINE L1 7728 7995 0 334 264 0 0 chr5 7976942 7977033 -195108499 + (CA)n Simple_repeat Simple_repeat 2 92 0 1056 286 48 45 chr5 7977204 7977743 -195107789 + MLT1F LTR MaLR 2 542 0 399 305 36 0 chr5 7977800 7977946 -195107586 - MLT1F LTR MaLR -262 280 133 240 295 8 23 chr5 7977978 7978107 -195107425 + MLT1F-int LTR MaLR 24 150 -1221 252 270 8 79 chr5 7978282 7978408 -195107124 + MLT1F-int LTR MaLR 442 558 -813 2064 117 0 11 chr5 7979157 7979439 -195106093 - AluSg SINE Alu 0 310 32 1573 210 40 101 chr5 7979657 7980210 -195105322 - LTR40a LTR ERVL 0 519 1 261 280 40 0 chr5 7980269 7980344 -195105188 + MLT1F LTR MaLR 1 78 -464 844 253 65 11 chr5 7980381 7980642 -195104890 + MLT1F LTR MaLR 155 429 -113 468 376 105 0 chr5 7980730 7980988 -195104544 - L3 LINE CR1 -13 1564 1280 229 339 0 0 chr5 7981807 7981872 -195103660 - MIR SINE MIR -103 105 41 301 321 92 16 chr5 7982664 7982848 -195102684 - L2 LINE L2 -604 2710 2513 2173 123 7 3 chr5 7983146 7983455 -195102077 - AluSx SINE Alu -2 310 1 537 187 16 82 chr5 7984085 7984267 -195101265 + MER114 LTR ERV 1 170 -478 606 262 143 6 chr5 7984301 7984637 -195100895 + MER114 LTR ERV 267 648 0 1517 246 54 67 chr5 7985204 7985640 -195099892 + L1M4 LINE L1 3568 3991 -2155 180 0 0 0 chr5 7985640 7985660 -195099872 + (TAAA)n Simple_repeat Simple_repeat 1 20 0 1517 246 54 67 chr5 7985660 7985988 -195099544 + L1M4 LINE L1 3991 4322 -1824 21 36 0 0 chr5 7986007 7986035 -195099497 + AT_rich Low_complexity Low_complexity 1 28 0 1200 198 31 0 chr5 7986058 7986348 -195099184 - L1MC2 LINE L1 -5 7764 6150 7023 211 33 10 chr5 7986369 7986423 -195099109 - L1MC3 LINE L1 -461 7324 7273 2209 119 48 20 chr5 7986423 7986775 -195098757 - THE1B LTR MaLR -2 362 1 7023 211 33 10 chr5 7986775 7988458 -195097074 - L1MC3 LINE L1 -512 7273 5547 34 55 0 0 chr5 7989287 7989342 -195096190 + AT_rich Low_complexity Low_complexity 1 55 0 204 295 33 0 chr5 7989345 7989406 -195096126 - MIR SINE MIR -108 154 92 2107 136 3 0 chr5 7989661 7989971 -195095561 - AluSx SINE Alu -1 311 1 21 36 0 0 chr5 7990132 7990160 -195095372 + AT_rich Low_complexity Low_complexity 1 28 0 27 0 0 0 chr5 7991914 7991941 -195093591 + AT_rich Low_complexity Low_complexity 1 27 0 413 252 119 13 chr5 7992306 7992457 -195093075 + MLT1E LTR MaLR 1 167 -426 581 249 94 133 chr5 7992474 7992932 -195092600 + MLT1E LTR MaLR 110 549 -105 375 23 0 0 chr5 7993774 7993818 -195091714 + (CA)n Simple_repeat Simple_repeat 1 44 0 198 103 0 0 chr5 7994000 7994029 -195091503 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 * 290 89 0 54 chr5 7994027 7994083 -195091449 + (GAAAA)n Simple_repeat Simple_repeat 1 53 0 387 0 0 0 chr5 7994436 7994479 -195091053 + (CA)n Simple_repeat Simple_repeat 2 44 0 2400 149 3 3 chr5 7995641 7996016 -195089516 - THE1C LTR MaLR 0 375 1 226 191 21 21 chr5 7996382 7996429 -195089103 - MER45A DNA AcHobo 0 178 132 2878 183 26 9 chr5 7996462 7996543 -195088989 - L1MA9 LINE L1 -295 6017 5939 273 57 0 0 chr5 7996543 7996578 -195088954 + (TTA)n Simple_repeat Simple_repeat 2 36 0 2878 183 26 9 chr5 7996578 7997080 -195088452 - L1MA9 LINE L1 -373 5939 5424 1111 198 38 0 chr5 7997070 7997308 -195088224 + L1MA9 LINE L1 6030 6276 -36 * 242 275 11 22 chr5 7997322 7997413 -195088119 - MER45R DNA AcHobo -35 1546 1457 1000 189 0 0 chr5 7997416 7997585 -195087947 - AluSg/x SINE Alu -19 291 123 3909 200 35 4 chr5 7997651 7998572 -195086960 - MER45R DNA AcHobo -98 1483 535 3386 139 46 56 chr5 7998966 7999591 -195085941 + LTR31 LTR ERV1 1 619 0 776 275 77 77 chr5 8000657 8001148 -195084384 - LTR33A LTR ERVL -2 521 31 2103 118 0 7 chr5 8001233 8001529 -195084003 + AluSg SINE Alu 1 294 -16 973 88 0 0 chr5 8001616 8001741 -195083791 - AluSg/x SINE Alu -14 298 174 1059 237 5 0 chr5 8001792 8002011 -195083521 + MLT1B LTR MaLR 1 220 -170 414 125 0 0 chr5 8002010 8002066 -195083466 + MLT1B LTR MaLR 335 390 0 * 189 0 0 0 chr5 8002071 8002092 -195083440 + (T)n Simple_repeat Simple_repeat 1 21 0 1521 248 49 31 chr5 8003530 8004082 -195081450 - L1ME2 LINE L1 -19 6145 5584 389 183 14 0 chr5 8004121 8004192 -195081340 - L1MC3 LINE L1 -836 6949 6878 3185 250 45 56 chr5 8004198 8005903 -195079629 - L1ME2 LINE L1 -2111 4035 2480 620 145 17 25 chr5 8005760 8006002 -195079530 - L1MA7 LINE L1 0 6291 5946 * 806 257 29 20 chr5 8006023 8006366 -195079166 - L1ME2 LINE L1 -3652 2494 2149 684 195 38 0 chr5 8006552 8006711 -195078821 + L1MB7 LINE L1 6011 6175 -9 277 325 25 0 chr5 8008025 8008105 -195077427 + MIR SINE MIR 26 107 -155 3070 59 0 0 chr5 8008257 8008647 -195076885 + L1PA8 LINE L1 5783 6172 0 829 292 49 49 chr5 8008725 8009132 -195076400 - L1ME3A LINE L1 -41 6129 5723 331 309 102 12 chr5 8009234 8009436 -195076096 - MLT1E LTR MaLR -362 180 1 276 295 33 16 chr5 8009499 8009621 -195075911 - MER104 DNA Tc2 -56 124 1 308 284 140 34 chr5 8010185 8010449 -195075083 + L1ME4a LINE L1 5759 6050 -71 308 306 145 30 chr5 8010864 8011319 -195074213 + L1ME LINE L1 5321 5829 -333 566 282 30 30 chr5 8011397 8011631 -195073901 + HAL1 LINE L1 1248 1481 -1026 1350 194 90 4 chr5 8011634 8011912 -195073620 + AluJo SINE Alu 1 302 -10 1317 283 110 41 chr5 8011912 8012696 -195072836 + HAL1 LINE L1 1570 2407 -100 55 86 0 0 chr5 8012737 8012876 -195072656 + AT_rich Low_complexity Low_complexity 1 139 0 535 236 43 7 chr5 8013990 8014130 -195071402 + LTR52 LTR ERVL 277 421 0 2372 180 40 67 chr5 8017193 8018036 -195067496 - MER21A LTR ERV1 -1 930 1 399 223 8 40 chr5 8020094 8020226 -195065306 + L1MB7 LINE L1 6058 6182 -1 708 218 81 0 chr5 8020866 8021040 -195064492 - MER5A DNA MER1_type -1 188 1 207 88 0 0 chr5 8021615 8021649 -195063883 + (T)n Simple_repeat Simple_repeat 1 34 0 1273 113 9 5 chr5 8021867 8022079 -195063453 - Tigger7 DNA MER2_type -40 2447 2235 267 214 0 18 chr5 8022077 8022133 -195063399 - Tigger7 DNA MER2_type -284 55 1 * 23 0 0 0 chr5 8022220 8022243 -195063289 + AT_rich Low_complexity Low_complexity 1 23 0 367 215 99 25 chr5 8022694 8022815 -195062717 - MER5A DNA MER1_type -1 188 59 24 32 0 0 chr5 8022941 8022972 -195062560 + AT_rich Low_complexity Low_complexity 1 31 0 2650 35 0 10 chr5 8023151 8023465 -195062067 + AluY SINE Alu 1 311 0 22 35 0 0 chr5 8023527 8023556 -195061976 + AT_rich Low_complexity Low_complexity 1 29 0 1292 128 0 0 chr5 8024199 8024386 -195061146 + AluSg/x SINE Alu 126 312 0 315 0 0 0 chr5 8024558 8024593 -195060939 + (CA)n Simple_repeat Simple_repeat 2 36 0 34 84 0 0 chr5 8024627 8024710 -195060822 + AT_rich Low_complexity Low_complexity 1 83 0 1375 136 80 31 chr5 8024987 8025273 -195060259 + THE1C LTR MaLR 1 300 -75 3739 164 50 10 chr5 8025296 8025977 -195059555 + L1P3 LINE L1 21 728 -5733 459 228 63 16 chr5 8025977 8026104 -195059428 + MLT2F LTR ERVL 531 663 0 1228 278 33 14 chr5 8026104 8026525 -195059007 + L1ME2 LINE L1 5727 6155 -9 285 257 14 0 chr5 8026527 8026601 -195058931 + L1MC4a LINE L1 6351 6425 -1383 * 1246 226 104 44 chr5 8026592 8027119 -195058413 + L1MC4 LINE L1 7483 8041 -1 266 329 129 34 chr5 8027711 8028023 -195057509 - L2 LINE L2 -243 3070 2729 246 136 0 0 chr5 8028327 8028371 -195057161 + (CCA)n Simple_repeat Simple_repeat 1 44 0 213 290 0 10 chr5 8028379 8028479 -195057053 + (CAA)n Simple_repeat Simple_repeat 2 100 0 3487 80 4 6 chr5 8028974 8029470 -195056062 + L1PA8 LINE L1 5675 6169 0 2060 146 132 5 chr5 8029881 8030259 -195055273 + MSTA LTR MaLR 3 428 0 9571 121 2 0 chr5 8030549 8032808 -195052724 + L1PA8 LINE L1 3908 6169 -3 25 0 0 0 chr5 8032815 8032840 -195052692 + AT_rich Low_complexity Low_complexity 1 25 0 22 70 0 0 chr5 8033020 8033063 -195052469 + AT_rich Low_complexity Low_complexity 1 43 0 315 346 12 0 chr5 8033356 8033518 -195052014 + T-rich Low_complexity Low_complexity 3 166 0 819 231 29 0 chr5 8033999 8034172 -195051360 - MER45A DNA AcHobo 0 178 1 587 353 39 24 chr5 8034355 8034689 -195050843 + MLT1J LTR MaLR 17 355 -156 335 255 32 21 chr5 8034861 8034955 -195050577 + MLT1L LTR MaLR 311 405 -210 207 0 0 0 chr5 8035017 8035040 -195050492 + (A)n Simple_repeat Simple_repeat 1 23 0 2251 85 0 53 chr5 8035968 8036286 -195049246 - AluSp SINE Alu -12 301 1 2295 137 11 8 chr5 8036286 8036644 -195048888 - THE1B LTR MaLR -5 359 1 724 260 29 0 chr5 8038204 8038377 -195047155 - MER45A DNA AcHobo 0 178 1 2057 158 97 8 chr5 8039131 8039524 -195046008 + MSTA LTR MaLR 1 428 0 192 318 45 27 chr5 8040572 8040682 -195044850 - L2 LINE L2 0 3272 3161 375 288 101 14 chr5 8040843 8040982 -195044550 + MIR SINE MIR 95 245 -17 2046 180 26 0 chr5 8042336 8042714 -195042818 - MLT1B LTR MaLR 0 390 3 2179 104 0 0 chr5 8042773 8043088 -195042444 - AluY SINE Alu 0 315 1 764 161 0 36 chr5 8043159 8043327 -195042205 - Tigger7 DNA MER2_type -96 2395 2234 263 259 0 0 chr5 8043322 8043376 -195042156 - Tigger7 DNA MER2_type -2432 55 2 * 3245 249 95 40 chr5 8043377 8045878 -195039654 - L1 LINE L1 -2816 4290 1926 408 20 0 0 chr5 8045878 8045927 -195039605 + (TG)n Simple_repeat Simple_repeat 2 50 0 3245 249 95 40 chr5 8045927 8046068 -195039464 - L1 LINE L1 -5180 1926 1794 1584 176 70 25 chr5 8046068 8046427 -195039105 + THE1C LTR MaLR 1 375 0 3245 249 95 40 chr5 8046427 8046868 -195038664 - L1 LINE L1 -5312 1794 1383 201 220 20 0 chr5 8047396 8047446 -195038086 - MER5B DNA MER1_type -127 51 1 23 0 0 0 chr5 8047898 8047921 -195037611 + AT_rich Low_complexity Low_complexity 1 23 0 4783 172 27 5 chr5 8049734 8050617 -195034915 + MER4D LTR ERV1 1 903 0 197 309 109 48 chr5 8051213 8051378 -195034154 + MIR SINE MIR 7 181 -81 1777 168 10 30 chr5 8051873 8052177 -195033355 + AluJb SINE Alu 3 300 -12 2795 200 20 75 chr5 8052369 8053100 -195032432 + LTR8 LTR ERV1 1 691 0 3644 174 13 14 chr5 8053223 8053929 -195031603 - MER67C LTR ERV1 -4 706 2 2022 136 95 3 chr5 8054030 8054511 -195031021 + LTR49 LTR ERV1 1 595 0 22 0 0 0 chr5 8054589 8054611 -195030921 + AT_rich Low_complexity Low_complexity 1 22 0 6125 156 13 8 chr5 8055710 8056782 -195028750 - Tigger2 DNA MER2_type -1 2717 1640 711 220 7 0 chr5 8057385 8057526 -195028006 - MER57B-int LTR ERV1 -1443 6094 5953 552 143 10 10 chr5 8057540 8057638 -195027894 + MER4A LTR ERV1 1 98 -566 1560 144 157 82 chr5 8057638 8058014 -195027518 + MER4A LTR ERV1 261 664 0 663 358 17 33 chr5 8058017 8058709 -195026823 - MER57B-int LTR ERV1 -1874 2773 2093 * 1410 255 17 43 chr5 8058680 8059163 -195026369 - MER57B-int LTR ERV1 -1791 5746 5277 254 359 0 0 chr5 8059241 8059319 -195026213 - MER57B-int LTR ERV1 -2940 3861 3784 265 315 0 27 chr5 8060630 8060741 -195024791 - MER57B-int LTR ERV1 -4345 3411 3304 207 0 0 0 chr5 8061966 8061989 -195023543 + (TTTTTG)n Simple_repeat Simple_repeat 2 24 0 2023 142 7 0 chr5 8062723 8063018 -195022514 + AluSx SINE Alu 1 297 -15 23 0 0 0 chr5 8063018 8063041 -195022491 + AT_rich Low_complexity Low_complexity 1 23 0 2544 69 0 0 chr5 8063155 8063459 -195022073 + AluY SINE Alu 1 304 -7 369 277 44 38 chr5 8063637 8063796 -195021736 - MER57B-int LTR ERV1 -7375 162 3 1313 224 46 53 chr5 8063818 8064199 -195021333 - MER57B LTR ERV1 -5 429 50 2332 129 8 21 chr5 8064199 8064579 -195020953 + THE1C LTR MaLR 1 375 0 1313 224 46 53 chr5 8064579 8064629 -195020903 - MER57B LTR ERV1 -384 50 1 21 0 0 0 chr5 8064935 8064956 -195020576 + AT_rich Low_complexity Low_complexity 1 21 0 2173 112 23 3 chr5 8065140 8065473 -195020059 - AluSg SINE Alu 0 339 1 387 363 29 29 chr5 8066074 8066245 -195019287 - MIR3 SINE MIR -22 186 16 207 161 0 0 chr5 8066318 8066349 -195019183 + (ATG)n Simple_repeat Simple_repeat 3 33 0 202 305 0 37 chr5 8067040 8067122 -195018410 + MIR SINE MIR 153 231 -31 9370 122 18 7 chr5 8067474 8068939 -195016593 + MER52-int LTR ERV1 5611 7091 0 924 234 17 80 chr5 8068944 8069648 -195015884 + MER52A LTR ERV1 283 1459 -147 403 272 5 60 chr5 8069628 8069812 -195015720 + MER52A LTR ERV1 1582 1755 0 * 645 296 68 27 chr5 8069970 8070338 -195015194 + L1ME3A LINE L1 3034 3416 -2730 1422 210 0 11 chr5 8070342 8070618 -195014914 - MER68 LTR ERV1 0 562 290 239 321 36 0 chr5 8070632 8070769 -195014763 + L1ME3A LINE L1 3503 3644 -2502 2038 155 11 6 chr5 8070896 8071251 -195014281 + THE1C LTR MaLR 19 375 0 9261 127 40 41 chr5 8071251 8072833 -195012699 + THE1C-int LTR MaLR 1 1580 0 2386 127 19 3 chr5 8072833 8073202 -195012330 + THE1C LTR MaLR 1 375 0 431 304 43 58 chr5 8073223 8073877 -195011655 + L1ME3A LINE L1 4062 4705 -1441 353 311 96 33 chr5 8073930 8074358 -195011174 + L1ME3A LINE L1 5404 5858 -312 1336 219 52 11 chr5 8074671 8075037 -195010495 + L1MC4 LINE L1 6699 7079 -963 515 267 0 0 chr5 8075040 8075175 -195010357 + L1MC4a LINE L1 7160 7294 -514 531 283 98 4 chr5 8075249 8075493 -195010039 + L1MC4 LINE L1 7632 7898 -144 521 306 0 8 chr5 8075847 8075981 -195009551 + MIR SINE MIR 20 152 -110 1104 148 136 47 chr5 8075985 8076302 -195009230 + MER4A LTR ERV1 1 345 -319 489 142 242 8 chr5 8076434 8076554 -195008978 + MER4C LTR ERV1 300 447 -18 1261 277 124 15 chr5 8076622 8077163 -195008369 - MER90 LTR ERV1 -2 573 11 2366 66 0 3 chr5 8078120 8078408 -195007124 + AluY SINE Alu 1 287 -24 622 258 148 9 chr5 8078433 8078662 -195006870 - MIR SINE MIR 0 262 2 22 0 0 0 chr5 8078895 8078917 -195006615 + AT_rich Low_complexity Low_complexity 1 22 0 1813 148 34 14 chr5 8079031 8079328 -195006204 - AluJb SINE Alu -9 303 1 747 248 96 11 chr5 8079368 8079650 -195005882 + L2 LINE L2 1812 2117 -1197 449 211 159 9 chr5 8079672 8079904 -195005628 - MER97a DNA MER1_type? -42 852 586 354 284 93 19 chr5 8080796 8080958 -195004574 - MLT1I LTR MaLR -10 399 226 22 70 0 0 chr5 8082379 8082422 -195003110 + AT_rich Low_complexity Low_complexity 1 43 0 334 346 100 4 chr5 8083088 8083328 -195002204 + L2 LINE L2 2621 2883 -431 24 32 0 0 chr5 8083484 8083515 -195002017 + AT_rich Low_complexity Low_complexity 1 31 0 319 326 58 7 chr5 8083781 8083919 -195001613 + MIR SINE MIR 8 152 -110 349 297 99 56 chr5 8085773 8086005 -194999527 + MIR SINE MIR 19 260 -2 199 229 169 36 chr5 8086000 8086083 -194999449 - L2 LINE L2 -33 3280 3187 * 1881 129 161 13 chr5 8086937 8087310 -194998222 - MSTA LTR MaLR 0 428 1 2299 117 3 0 chr5 8087629 8087938 -194997594 + AluSg SINE Alu 1 310 0 509 146 0 0 chr5 8088010 8088092 -194997440 - Tigger1 DNA MER2_type 0 2418 2337 * 5564 156 26 3 chr5 8088090 8089033 -194996499 - Tigger1 DNA MER2_type -1393 1025 56 195 42 0 0 chr5 8089033 8089057 -194996475 + (TA)n Simple_repeat Simple_repeat 1 24 0 5564 156 26 3 chr5 8089057 8089115 -194996417 - Tigger1 DNA MER2_type -2362 56 1 309 261 268 0 chr5 8090253 8090395 -194995137 + MIR SINE MIR 72 251 -11 212 195 39 104 chr5 8090479 8090556 -194994976 + MIR3 SINE MIR 101 172 -36 1559 290 47 24 chr5 8091161 8092466 -194993066 - ERVL LTR ERVL -1916 3848 2416 1113 292 84 11 chr5 8092533 8092999 -194992533 - ERVL LTR ERVL -3462 2302 1803 2493 60 0 0 chr5 8093108 8093406 -194992126 + AluY SINE Alu 1 298 -13 808 224 24 0 chr5 8093461 8093626 -194991906 + FRAM SINE Alu 1 166 -10 1926 178 21 40 chr5 8094437 8094859 -194990673 + MLT2D LTR ERVL 1 414 0 656 238 0 0 chr5 8095253 8095375 -194990157 + FLAM_C SINE Alu 3 124 -19 727 204 151 70 chr5 8095480 8095837 -194989695 + MLT1B LTR MaLR 1 386 -4 7229 134 21 5 chr5 8095930 8097205 -194988327 - Tigger4(Zombi) DNA MER2_type -1 2730 1443 783 97 8 8 chr5 8097217 8097341 -194988191 + MER4A LTR ERV1 1 124 -540 311 111 0 19 chr5 8097341 8097395 -194988137 + (GAAA)n Simple_repeat Simple_repeat 1 53 0 1247 137 155 161 chr5 8097405 8097947 -194987585 + MER4A LTR ERV1 126 664 0 7517 153 16 8 chr5 8097947 8099268 -194986264 - Tigger4(Zombi) DNA MER2_type -1297 1434 103 1069 140 57 83 chr5 8099472 8099736 -194985796 + THE1C LTR MaLR 1 257 -118 272 357 43 47 chr5 8100745 8101022 -194984510 + L2 LINE L2 1742 2017 -1297 513 167 0 0 chr5 8101507 8101609 -194983923 + (TCCA)n Simple_repeat Simple_repeat 1 102 0 609 336 119 30 chr5 8103529 8103559 -194981973 + L2 LINE L2 2721 2747 -566 1523 154 67 83 chr5 8103559 8103994 -194981538 + MSTB1 LTR MaLR 1 428 -4 609 336 119 30 chr5 8103994 8104485 -194981047 + L2 LINE L2 2747 3294 -19 349 210 40 30 chr5 8106368 8106468 -194979064 - MER94 DNA DNA -33 101 1 2870 94 18 16 chr5 8106924 8106972 -194978560 - L1PB2 LINE L1 -2 6149 6103 2326 124 34 8 chr5 8106972 8107327 -194978205 + THE1B LTR MaLR 1 364 0 2870 94 18 16 chr5 8107327 8107716 -194977816 - L1PB2 LINE L1 -48 6103 5711 22 0 0 0 chr5 8107784 8107806 -194977726 + AT_rich Low_complexity Low_complexity 1 22 0 2018 114 0 0 chr5 8108323 8108594 -194976938 + AluSc SINE Alu 35 305 -4 22 0 0 0 chr5 8108691 8108713 -194976819 + AT_rich Low_complexity Low_complexity 1 22 0 2848 7 0 0 chr5 8110040 8110347 -194975185 - AluYa5 SINE Alu -4 307 1 2100 121 0 0 chr5 8110465 8110776 -194974756 + AluSc SINE Alu 1 311 0 744 241 43 35 chr5 8110866 8111123 -194974409 + MER90 LTR ERV1 7 265 -310 678 158 201 11 chr5 8111137 8111321 -194974211 + MER90 LTR ERV1 382 600 -14 3393 227 48 43 chr5 8112400 8113533 -194971999 + MER52A LTR ERV1 56 1193 -562 338 183 0 0 chr5 8113540 8113600 -194971932 + MER52A LTR ERV1 1696 1755 0 * 792 203 154 24 chr5 8113600 8113845 -194971687 + MLT1B LTR MaLR 114 390 0 2183 111 7 3 chr5 8113914 8114211 -194971321 + AluSp SINE Alu 12 309 -4 452 283 34 34 chr5 8114313 8114546 -194970986 - L1ME1 LINE L1 -6 6160 5928 532 224 0 9 chr5 8114840 8114956 -194970576 + L1MDb LINE L1 43 157 -6252 1738 162 68 31 chr5 8114956 8115107 -194970425 + THE1B LTR MaLR 1 145 -219 2183 131 0 0 chr5 8115107 8115405 -194970127 + AluSq SINE Alu 1 298 -15 1738 162 68 31 chr5 8115405 8115604 -194969928 + THE1B LTR MaLR 145 364 0 4548 227 62 49 chr5 8115644 8117357 -194968175 - L1MDb LINE L1 -4672 1734 8 1594 209 42 27 chr5 8117411 8118118 -194967414 + L1MD1 LINE L1 4968 5848 -394 2483 60 0 0 chr5 8118118 8118419 -194967113 + AluY SINE Alu 1 301 -10 1594 209 42 27 chr5 8118419 8118815 -194966717 + L1MD1 LINE L1 5848 6236 -6 2779 256 99 37 chr5 8119145 8119516 -194966016 - L1MD3 LINE L1 -749 6192 5846 297 0 0 0 chr5 8119516 8119549 -194965983 + (TG)n Simple_repeat Simple_repeat 2 34 0 2779 256 99 37 chr5 8119549 8121667 -194963865 - L1MD3 LINE L1 -1095 5846 5156 2062 144 3 3 chr5 8121667 8121973 -194963559 - AluSc SINE Alu -3 306 1 2779 256 99 37 chr5 8121973 8122152 -194963380 - L1MD3 LINE L1 -1785 5156 4990 679 255 64 85 chr5 8122171 8122547 -194962985 - MSTD LTR MaLR -23 373 6 1289 293 57 18 chr5 8122554 8123446 -194962086 - L1MD3 LINE L1 -2029 4912 3986 401 231 56 42 chr5 8123508 8123651 -194961881 - L1MD3 LINE L1 -4451 2490 2346 336 48 0 0 chr5 8123706 8123748 -194961784 + (CA)n Simple_repeat Simple_repeat 2 43 0 1274 80 0 45 chr5 8123751 8123802 -194961730 - L1P5 LINE L1 -370 5781 5729 1908 134 7 20 chr5 8123802 8124100 -194961432 - AluSq SINE Alu -19 294 1 1274 80 0 45 chr5 8124100 8124247 -194961285 - L1P5 LINE L1 -422 5729 5592 738 257 58 56 chr5 8124237 8124650 -194960882 - L1MD3 LINE L1 -4888 1535 1122 * 506 310 77 75 chr5 8125249 8125688 -194959844 - L1MD3 LINE L1 -5604 818 379 363 191 0 0 chr5 8126250 8126313 -194959219 - MER4A LTR ERV1 -224 440 378 3281 217 62 72 chr5 8126313 8128370 -194957162 - HERVH LTR ERV1 -5666 2047 1 1241 173 121 72 chr5 8128370 8128799 -194956733 - LTR7 LTR ERV1 0 450 1 1905 229 69 9 chr5 8128958 8129491 -194956041 + MER34B LTR ERV1 1 565 0 269 136 0 0 chr5 8129714 8129758 -194955774 + L1MB1 LINE L1 6125 6168 0 1556 139 25 68 chr5 8129842 8130202 -194955330 - MER4A LTR ERV1 0 664 262 438 144 89 0 chr5 8130203 8130293 -194955239 - MER4A LTR ERV1 -566 98 1 237 281 21 42 chr5 8130474 8130570 -194954962 - L1MDb LINE L1 -6004 405 312 226 279 36 0 chr5 8130820 8130931 -194954601 + L1ME LINE L1 5677 5791 -330 2261 76 3 0 chr5 8131166 8131467 -194954065 + AluY SINE Alu 1 302 -9 380 213 8 0 chr5 8132911 8133033 -194952499 + (TA)n Simple_repeat Simple_repeat 2 124 0 2408 63 3 0 chr5 8133635 8133935 -194951597 + AluY SINE Alu 1 301 -10 22 56 0 0 chr5 8134434 8134470 -194951062 + AT_rich Low_complexity Low_complexity 1 36 0 12122 28 4 0 chr5 8134820 8137013 -194948519 + L1PA3 LINE L1 3883 6085 -70 889 177 7 131 chr5 8137137 8137420 -194948112 + MLT1A1 LTR MaLR 116 363 -2 287 284 53 110 chr5 8139039 8139321 -194946211 - L2 LINE L2 -19 3253 2988 198 326 33 33 chr5 8139681 8139773 -194945759 + L2 LINE L2 3162 3253 -19 27 29 0 0 chr5 8142267 8142301 -194943231 + AT_rich Low_complexity Low_complexity 1 34 0 6196 205 28 5 chr5 8143049 8144549 -194940983 + L1 LINE L1 3478 5011 -1135 460 215 56 0 chr5 8144550 8144657 -194940875 + MER68 LTR ERV1 450 562 0 488 302 19 6 chr5 8145030 8145189 -194940343 - MIR SINE MIR -42 220 60 2295 87 0 10 chr5 8146337 8146648 -194938884 + AluY SINE Alu 1 308 -3 324 343 112 12 chr5 8147122 8147364 -194938168 - L2 LINE L2 -1059 2255 1990 332 227 114 23 chr5 8147411 8147543 -194937989 - L2 LINE L2 -58 3255 3112 2044 121 0 39 chr5 8148310 8148616 -194936916 + AluY SINE Alu 3 296 -15 2589 133 30 0 chr5 8149241 8149640 -194935892 + LTR57 LTR ERVL 1 411 0 281 26 26 0 chr5 8150639 8150677 -194934855 + (GAAA)n Simple_repeat Simple_repeat 2 40 0 446 215 37 0 chr5 8151417 8151524 -194934008 - L1MA4 LINE L1 -220 6080 5970 1930 167 3 3 chr5 8153392 8153697 -194931835 + AluSx SINE Alu 1 305 -7 4734 234 29 8 chr5 8153871 8155249 -194930283 - L1M4 LINE L1 -1109 5037 3631 552 173 29 7 chr5 8155609 8155748 -194929784 + CT-rich Low_complexity Low_complexity 3 144 0 2531 107 28 0 chr5 8158264 8158618 -194926914 - THE1B LTR MaLR 0 364 1 27 29 0 0 chr5 8159645 8159679 -194925853 + AT_rich Low_complexity Low_complexity 1 34 0 274 256 0 0 chr5 8160041 8160123 -194925409 - L1ME LINE L1 -415 5755 5674 2096 137 23 0 chr5 8160784 8161126 -194924406 + L1PA14 LINE L1 5812 6161 0 281 231 128 26 chr5 8162651 8162768 -194922764 - LTR16A LTR ERVL -2 448 320 350 306 22 55 chr5 8163236 8163419 -194922113 + MER5B DNA MER1_type 2 178 0 392 304 155 19 chr5 8165581 8165788 -194919744 - MIR SINE MIR 0 262 28 233 294 0 78 chr5 8165811 8165913 -194919619 - L2 LINE L2 -24 3289 3196 939 234 20 16 chr5 8166778 8167022 -194918510 + L1PB4 LINE L1 5898 6142 -14 1490 196 54 4 chr5 8167034 8167431 -194918101 - L1ME LINE L1 -744 5589 5176 234 0 0 0 chr5 8167437 8167463 -194918069 + (TTTTTG)n Simple_repeat Simple_repeat 3 28 0 407 136 0 0 chr5 8168224 8168290 -194917242 + Alu SINE Alu 235 300 -12 22 0 0 0 chr5 8168357 8168379 -194917153 + AT_rich Low_complexity Low_complexity 1 22 0 256 24 24 24 chr5 8169342 8169384 -194916148 + (TTTA)n Simple_repeat Simple_repeat 3 44 0 7715 17 2 0 chr5 8169384 8170699 -194914833 - L1PA3 LINE L1 -10 6145 4827 23 92 0 0 chr5 8170928 8170993 -194914539 + AT_rich Low_complexity Low_complexity 1 65 0 1863 162 72 17 chr5 8171753 8172098 -194913434 + THE1B LTR MaLR 1 364 0 1558 152 194 8 chr5 8172312 8172668 -194912864 - MSTA LTR MaLR 0 428 7 21 36 0 0 chr5 8173206 8173234 -194912298 + AT_rich Low_complexity Low_complexity 1 28 0 955 142 17 94 chr5 8173602 8173872 -194911660 - L1M1 LINE L1 -743 5403 5223 1093 256 0 9 chr5 8173930 8174251 -194911281 - L1MCa LINE L1 -3231 3195 2878 242 122 0 20 chr5 8174251 8174300 -194911232 + (TCC)n Simple_repeat Simple_repeat 3 50 0 836 261 80 60 chr5 8174302 8174931 -194910601 - L1MCa LINE L1 -3558 2868 2253 2329 94 3 0 chr5 8174931 8175229 -194910303 + AluSp SINE Alu 2 300 -13 836 261 80 60 chr5 8175229 8176021 -194909511 - L1MCa LINE L1 -4173 2253 1275 227 191 16 16 chr5 8176089 8176152 -194909380 - Charlie2a DNA MER1_type -691 2171 2109 27 29 0 0 chr5 8176190 8176224 -194909308 + AT_rich Low_complexity Low_complexity 1 34 0 999 260 32 63 chr5 8176237 8176790 -194908742 - Charlie2a DNA MER1_type -781 2081 1546 2277 47 22 0 chr5 8178877 8179228 -194906304 - AluY SINE Alu 0 311 5 1870 100 82 0 chr5 8179551 8179831 -194905701 - AluSp SINE Alu -10 303 1 443 127 0 0 chr5 8180020 8180091 -194905441 - MADE1 DNA Mariner -9 71 1 21 0 0 0 chr5 8180177 8180198 -194905334 + AT_rich Low_complexity Low_complexity 1 21 0 218 222 34 34 chr5 8180482 8180599 -194904933 + (TA)n Simple_repeat Simple_repeat 1 117 0 1281 147 77 18 chr5 8182250 8182522 -194903010 + MER46B DNA MER2_type 1 163 -73 2065 144 0 22 chr5 8182732 8183051 -194902481 - AluSx SINE Alu 0 312 1 2031 163 0 0 chr5 8183103 8183397 -194902135 - AluSx SINE Alu -18 294 1 506 218 34 58 chr5 8183773 8183979 -194901553 - L1MA10 LINE L1 0 6334 6134 4794 167 11 9 chr5 8184277 8185638 -194899894 + L1PA16 LINE L1 4784 6160 -6 268 342 9 0 chr5 8186033 8186147 -194899385 - L1MCa LINE L1 -6066 541 427 253 288 0 0 chr5 8186353 8186433 -194899099 - MER89-int LTR ERV1 -134 6667 6588 1699 216 17 11 chr5 8187120 8187476 -194898056 + MLT1A1 LTR MaLR 4 361 -4 835 328 30 7 chr5 8187481 8187914 -194897618 + L1MEc LINE L1 81 523 -5873 210 288 0 0 chr5 8189999 8190058 -194895474 + CT-rich Low_complexity Low_complexity 1 59 0 312 193 84 0 chr5 8190889 8190972 -194894560 - MLT1E3 LTR MaLR -9 615 526 637 186 87 50 chr5 8191289 8191450 -194894082 + MER5A DNA MER1_type 18 184 -5 359 243 29 71 chr5 8192015 8192225 -194893307 - L1MA10 LINE L1 0 6334 6134 257 208 14 0 chr5 8193322 8193394 -194892138 + (TA)n Simple_repeat Simple_repeat 1 73 0 25 31 0 0 chr5 8193738 8193770 -194891762 + AT_rich Low_complexity Low_complexity 1 32 0 200 299 75 0 chr5 8194444 8194511 -194891021 + MIR SINE MIR 110 181 -81 346 262 135 24 chr5 8195547 8195673 -194889859 - MER91C DNA MER1_type 0 140 1 300 269 35 28 chr5 8195793 8195938 -194889594 - LTR16C LTR ERVL -2 489 344 183 360 44 9 chr5 8201157 8201271 -194884261 - L2 LINE L2 -640 2674 2557 21 36 0 0 chr5 8202540 8202568 -194882964 + AT_rich Low_complexity Low_complexity 1 28 0 2509 51 0 3 chr5 8203133 8203426 -194882106 + AluY SINE Alu 1 292 -19 2547 159 4 50 chr5 8203832 8204296 -194881236 - MER65A LTR ERV1 0 445 3 256 318 65 18 chr5 8205844 8206014 -194879518 + LTR41 LTR ERVL 8 185 -588 1248 255 53 44 chr5 8206679 8207091 -194878441 + LTR40a LTR ERVL 104 519 0 943 238 0 15 chr5 8207766 8207968 -194877564 + L1PA13 LINE L1 2 200 -6587 427 288 53 82 chr5 8207952 8208271 -194877261 + L1PA13 LINE L1 417 726 -6061 * 5462 266 26 35 chr5 8208453 8211298 -194874234 + L1PA13 LINE L1 1323 4136 -2661 1692 171 60 41 chr5 8211315 8211683 -194873849 - THE1C LTR MaLR 0 375 1 6488 157 16 56 chr5 8211683 8212958 -194872574 - THE1C-int LTR MaLR 0 1580 357 1120 231 3 60 chr5 8213079 8213378 -194872154 + AluJb SINE Alu 1 282 -30 1946 255 47 55 chr5 8213395 8214290 -194871242 - L1M4 LINE L1 -2614 3532 2645 457 248 32 16 chr5 8214292 8214417 -194871115 - L1MCb LINE L1 -5349 696 570 258 289 33 25 chr5 8214504 8214625 -194870907 - L1MCb LINE L1 -5475 570 449 439 255 54 88 chr5 8216909 8217148 -194868384 - MLT1J LTR MaLR -53 458 228 269 253 13 13 chr5 8217290 8217365 -194868167 - MLT1L LTR MaLR -540 75 1 387 41 0 0 chr5 8219188 8219237 -194866295 + (TG)n Simple_repeat Simple_repeat 2 50 0 209 182 0 65 chr5 8219756 8219833 -194865699 + A-rich Low_complexity Low_complexity 3 74 0 330 302 90 54 chr5 8220130 8220352 -194865180 - L2 LINE L2 -9 3304 3075 1024 282 68 21 chr5 8220450 8220875 -194864657 - L2 LINE L2 -476 2838 2394 491 294 11 39 chr5 8221115 8221295 -194864237 + L2 LINE L2 2512 2686 -628 395 292 19 43 chr5 8222118 8222327 -194863205 - MLT1J1 LTR MaLR -9 437 234 210 143 0 0 chr5 8222886 8222921 -194862611 + (GGGAA)n Simple_repeat Simple_repeat 1 35 0 22 0 0 0 chr5 8224257 8224279 -194861253 + AT_rich Low_complexity Low_complexity 1 22 0 380 258 147 26 chr5 8224376 8224566 -194860966 - L1MC4a LINE L1 -86 7722 7510 15472 169 45 62 chr5 8225044 8229873 -194855659 - L1 LINE L1 -2029 5536 773 5855 109 5 6 chr5 8229873 8230654 -194854878 + LTR17 LTR ERV1 1 780 0 15472 169 45 62 chr5 8230654 8230727 -194854805 - L1 LINE L1 -6792 773 700 5796 126 24 27 chr5 8230790 8231809 -194853723 - L1P3 LINE L1 -4734 1141 271 1548 105 9 0 chr5 8231985 8232204 -194853328 + L1PA14 LINE L1 5939 6159 -2 247 366 0 0 chr5 8232595 8232696 -194852836 + L2 LINE L2 3208 3308 -5 415 325 33 4 chr5 8233769 8233955 -194851577 - MLT1J2 LTR MaLR -15 534 347 434 316 26 0 chr5 8234574 8234729 -194850803 - MLT1J2 LTR MaLR -187 263 105 582 277 15 42 chr5 8234742 8235002 -194850530 + L1ME3A LINE L1 5917 6169 -1 1163 159 8 41 chr5 8235020 8235189 -194850343 + L1ME LINE L1 5192 5352 -814 1340 193 77 11 chr5 8235189 8235463 -194850069 + AluJb SINE Alu 1 292 -20 1163 159 8 41 chr5 8235463 8235578 -194849954 + L1ME LINE L1 5352 5469 -697 24 32 0 0 chr5 8236498 8236529 -194849003 + AT_rich Low_complexity Low_complexity 1 31 0 1982 141 63 30 chr5 8238040 8238403 -194847129 - THE1C LTR MaLR 0 375 1 1622 178 57 48 chr5 8238832 8238854 -194846678 + MLT1A2 LTR MaLR 1 21 -353 2665 136 30 28 chr5 8238854 8239280 -194846252 + MSTA LTR MaLR 1 427 -1 1622 178 57 48 chr5 8239280 8239347 -194846185 + MLT1A2 LTR MaLR 21 86 -288 1498 196 94 24 chr5 8239347 8239688 -194845844 - MLT1A1 LTR MaLR 0 365 1 1622 178 57 48 chr5 8239688 8239968 -194845564 + MLT1A2 LTR MaLR 86 374 0 1450 170 0 8 chr5 8241191 8241438 -194844094 - L1MA10 LINE L1 -2 6332 6088 1042 156 50 6 chr5 8241439 8241618 -194843914 + MSTA LTR MaLR 1 187 -241 843 83 0 0 chr5 8241627 8241736 -194843796 + MSTA LTR MaLR 320 428 0 2545 200 32 6 chr5 8241755 8242254 -194843278 - L1MB1 LINE L1 -119 6070 5559 299 188 41 18 chr5 8243004 8243174 -194842358 + (TG)n Simple_repeat Simple_repeat 1 174 0 556 91 27 59 chr5 8243210 8243396 -194842136 + (TG)n Simple_repeat Simple_repeat 1 180 0 281 184 29 29 chr5 8243507 8243681 -194841851 + (TG)n Simple_repeat Simple_repeat 1 174 0 482 155 39 13 chr5 8243700 8243936 -194841596 + (TG)n Simple_repeat Simple_repeat 1 242 0 601 170 7 85 chr5 8245165 8245235 -194840297 + MLT1D LTR MaLR 376 431 -74 1993 160 0 0 chr5 8245235 8245547 -194839985 - AluSx SINE Alu 0 312 1 601 170 7 85 chr5 8245547 8245617 -194839915 + MLT1D LTR MaLR 431 505 0 1858 135 14 14 chr5 8245859 8246156 -194839376 - L1P3 LINE L1 -5578 297 1 * 2476 271 52 11 chr5 8246150 8246818 -194838714 - L1M1 LINE L1 -6853 712 17 216 379 9 26 chr5 8246897 8247013 -194838519 + MER5A DNA MER1_type 67 180 -9 21 57 0 0 chr5 8247732 8247767 -194837765 + AT_rich Low_complexity Low_complexity 1 35 0 634 244 76 0 chr5 8248157 8248329 -194837203 + MER5A DNA MER1_type 2 186 -3 813 105 29 6 chr5 8249819 8249991 -194835541 + (TAGA)n Simple_repeat Simple_repeat 2 177 0 1216 233 11 32 chr5 8249991 8250339 -194835193 - MLT2C1 LTR ERVL -54 343 3 2342 103 0 10 chr5 8250548 8250859 -194834673 + AluSq SINE Alu 1 308 -5 313 278 62 0 chr5 8251373 8251470 -194834062 - HAL1 LINE L1 -857 1650 1548 692 285 92 15 chr5 8251532 8251998 -194833534 + MER20B DNA MER1_type 281 782 -1 247 274 62 84 chr5 8252032 8252211 -194833321 - HAL1 LINE L1 -2331 176 2 429 316 49 49 chr5 8252402 8252646 -194832886 + MIR SINE MIR 19 262 0 22 56 0 0 chr5 8253305 8253341 -194832191 + AT_rich Low_complexity Low_complexity 1 36 0 2406 181 45 22 chr5 8253997 8254599 -194830933 - L1MA8 LINE L1 -59 6232 5617 3123 169 53 46 chr5 8254600 8255579 -194829953 + L1MA8 LINE L1 4634 5607 -684 365 0 22 0 chr5 8256087 8256132 -194829400 + (TTTTA)n Simple_repeat Simple_repeat 1 46 0 2357 52 10 0 chr5 8256141 8256429 -194829103 - AluY SINE Alu -20 291 1 259 266 21 63 chr5 8257561 8257704 -194827828 - MER65B LTR ERV1 -394 137 1 1961 79 4 0 chr5 8258081 8258335 -194827197 + AluY SINE Alu 57 311 0 452 282 18 72 chr5 8258345 8258622 -194826910 + MLT1E1-int LTR MaLR 969 1230 -141 1188 227 109 91 chr5 8258736 8259362 -194826170 + MLT1E1 LTR MaLR 18 654 0 542 261 0 0 chr5 8261440 8261559 -194823973 - Tigger3(Golem) DNA MER2_type -2909 120 2 499 277 114 42 chr5 8262717 8263024 -194822508 + LTR16B LTR ERVL 1 329 -135 21 36 0 0 chr5 8263931 8263959 -194821573 + AT_rich Low_complexity Low_complexity 1 28 0 661 154 8 8 chr5 8265168 8265298 -194820234 + GA-rich Low_complexity Low_complexity 3 132 0 19769 58 1 3 chr5 8265359 8268712 -194816820 - L1PA6 LINE L1 -6 6148 2805 2794 114 18 5 chr5 8269913 8270351 -194815181 - L1PB2 LINE L1 -3 6148 5705 350 103 88 0 chr5 8270791 8270859 -194814673 - L1P5 LINE L1 -373 5778 5705 1728 102 33 126 chr5 8272096 8272430 -194813102 + AluSq SINE Alu 1 303 -10 527 259 74 54 chr5 8272433 8272730 -194812802 + LTR33A LTR ERVL 221 523 0 740 301 107 46 chr5 8272862 8273387 -194812145 - MLT1G1 LTR MaLR -36 559 3 1842 127 3 45 chr5 8273674 8274010 -194811522 - AluSx SINE Alu 0 326 3 472 269 15 0 chr5 8274574 8274708 -194810824 - MER119 DNA MER1_type 0 583 448 984 242 81 20 chr5 8274742 8275039 -194810493 - MER119 DNA MER1_type -268 315 1 687 188 227 0 chr5 8275047 8275223 -194810309 + MER20 DNA MER1_type 1 216 -3 1487 237 121 29 chr5 8275364 8275820 -194809712 + MLT2B1 LTR ERVL 13 510 -10 305 287 42 48 chr5 8276551 8276718 -194808814 - L2 LINE L2 -273 2999 2834 2136 111 0 10 chr5 8277594 8277891 -194807641 - AluSg SINE Alu -16 294 1 7856 12 0 0 chr5 8277912 8279136 -194806396 - L1PA2 LINE L1 0 6155 4934 3884 33 0 0 chr5 8279136 8279624 -194805908 + L1PA2 LINE L1 4440 4927 -1219 964 261 118 52 chr5 8280020 8280502 -194805030 + MER90 LTR ERV1 92 605 -9 261 57 0 0 chr5 8283088 8283123 -194802409 + (CA)n Simple_repeat Simple_repeat 1 35 0 310 348 65 0 chr5 8284986 8285124 -194800408 - MIR SINE MIR -29 233 87 184 405 22 0 chr5 8285267 8285356 -194800176 + MER5A DNA MER1_type 9 99 -90 431 104 0 0 chr5 8285487 8285554 -194799978 + L1P LINE L1 2913 2979 -3167 3578 64 2 0 chr5 8285559 8286014 -194799518 + L1PA7 LINE L1 5695 6150 -4 482 155 39 13 chr5 8287005 8287241 -194798291 + (CA)n Simple_repeat Simple_repeat 1 242 0 281 184 29 29 chr5 8287260 8287434 -194798098 + (CA)n Simple_repeat Simple_repeat 1 174 0 556 91 27 59 chr5 8287545 8287731 -194797801 + (CA)n Simple_repeat Simple_repeat 1 180 0 329 182 47 12 chr5 8287767 8287937 -194797595 + (CA)n Simple_repeat Simple_repeat 1 176 0 2309 200 32 6 chr5 8288687 8289186 -194796346 + L1MB1 LINE L1 5559 6070 -119 784 83 0 0 chr5 8289205 8289314 -194796218 - MSTA LTR MaLR 0 428 320 955 153 51 6 chr5 8289326 8289502 -194796030 - MSTA LTR MaLR -244 184 1 1322 170 0 8 chr5 8289503 8289750 -194795782 + L1MA10 LINE L1 6088 6332 -2 1463 181 57 48 chr5 8290973 8291253 -194794279 - MLT1A2 LTR MaLR 0 374 98 1347 196 94 24 chr5 8291253 8291594 -194793938 + MLT1A1 LTR MaLR 1 365 0 1463 181 57 48 chr5 8291594 8291661 -194793871 - MLT1A2 LTR MaLR -276 98 21 2462 136 30 30 chr5 8291661 8292088 -194793444 - MSTA LTR MaLR -1 427 1 1463 181 57 48 chr5 8292088 8292110 -194793422 - MLT1A2 LTR MaLR -353 21 1 1815 141 63 30 chr5 8292539 8292902 -194792630 + THE1C LTR MaLR 1 375 0 24 32 0 0 chr5 8294413 8294444 -194791088 + AT_rich Low_complexity Low_complexity 1 31 0 1016 167 8 41 chr5 8295364 8295479 -194790053 - L1ME LINE L1 -697 5469 5352 1360 193 77 11 chr5 8295479 8295753 -194789779 - AluJb SINE Alu -20 292 1 1016 167 8 41 chr5 8295753 8295922 -194789610 - L1ME LINE L1 -814 5352 5192 24 0 0 0 chr5 8295932 8295956 -194789576 + AT_rich Low_complexity Low_complexity 1 24 0 498 288 16 33 chr5 8295957 8296200 -194789332 - L1ME3A LINE L1 -15 6155 5917 358 313 27 0 chr5 8296213 8296360 -194789172 + MLT1J2 LTR MaLR 105 255 -195 365 320 26 0 chr5 8297019 8297172 -194788360 + MLT1H LTR MaLR 378 534 -15 240 333 0 43 chr5 8298246 8298363 -194787169 - L2 LINE L2 -5 3308 3197 2066 96 7 0 chr5 8298738 8299040 -194786492 - L1PA14 LINE L1 -2 6159 5856 2279 103 0 22 chr5 8299041 8299352 -194786180 - AluSq SINE Alu -9 304 1 21 0 0 0 chr5 8300642 8300663 -194784869 + AT_rich Low_complexity Low_complexity 1 21 0 673 305 181 25 chr5 8300713 8301304 -194784228 - L1M4 LINE L1 -1858 4288 3606 1885 138 164 11 chr5 8301353 8301724 -194783808 + MSTA LTR MaLR 1 428 0 24 0 0 0 chr5 8301833 8301857 -194783675 + AT_rich Low_complexity Low_complexity 1 24 0 328 333 30 0 chr5 8301876 8302008 -194783524 - L1M4 LINE L1 -2355 3791 3656 213 178 0 0 chr5 8302208 8302253 -194783279 + (TA)n Simple_repeat Simple_repeat 1 45 0 367 267 10 0 chr5 8302264 8302365 -194783167 - MLT2D LTR ERVL -42 478 377 842 205 16 11 chr5 8302389 8302579 -194782953 - MLT2D LTR ERVL -218 196 6 399 298 59 50 chr5 8302624 8302844 -194782688 + MIR3 SINE MIR 14 236 -26 2576 140 63 2 chr5 8302985 8303429 -194782103 + LOR1a LTR ERV1 19 489 -8 209 417 45 15 chr5 8305042 8305174 -194780358 + MIR3 SINE MIR 2 137 -71 1783 119 15 4 chr5 8307179 8307440 -194778092 - AluSx SINE Alu -10 302 39 335 385 40 6 chr5 8307472 8307646 -194777886 + MIR SINE MIR 12 191 -71 23 86 0 0 chr5 8307717 8307775 -194777757 + AT_rich Low_complexity Low_complexity 1 58 0 268 277 69 15 chr5 8308078 8308208 -194777324 - MER106B DNA MER1_type 0 1059 923 388 193 18 0 chr5 8308213 8308322 -194777210 + (TA)n Simple_repeat Simple_repeat 1 111 0 32 0 0 0 chr5 8309071 8309103 -194776429 + AT_rich Low_complexity Low_complexity 1 32 0 42 57 0 0 chr5 8310421 8310491 -194775041 + AT_rich Low_complexity Low_complexity 1 70 0 317 227 152 8 chr5 8311104 8311236 -194774296 + MER58C DNA MER1_type 54 204 -11 303 307 45 25 chr5 8311636 8311838 -194773694 + HAL1 LINE L1 27 232 -2275 512 214 71 0 chr5 8312098 8312238 -194773294 - L1MEc LINE L1 -4306 2090 1941 2315 209 31 45 chr5 8312339 8312960 -194772572 - MER90 LTR ERV1 0 614 3 539 192 33 0 chr5 8313080 8313200 -194772332 + MLT2E LTR ERVL 504 627 -1 518 319 65 4 chr5 8313232 8313461 -194772071 + HAL1 LINE L1 357 599 -1908 463 282 88 12 chr5 8313700 8314355 -194771177 - L1MEc LINE L1 -3922 2474 1702 708 250 96 33 chr5 8315491 8315877 -194769655 - MLT1C LTR MaLR -3 464 2 596 332 42 14 chr5 8315891 8316105 -194769427 - MIR SINE MIR -38 224 5 338 233 14 0 chr5 8316112 8316185 -194769347 + MIR SINE MIR 113 186 -76 203 407 68 0 chr5 8316352 8316470 -194769062 + L2 LINE L2 3147 3272 0 227 114 23 0 chr5 8316871 8316915 -194768617 + (TA)n Simple_repeat Simple_repeat 2 46 0 211 315 62 23 chr5 8316986 8317116 -194768416 + MIR SINE MIR 57 191 -71 188 81 48 65 chr5 8317168 8317230 -194768302 + (CAGAGA)n Simple_repeat Simple_repeat 6 66 0 1091 197 140 9 chr5 8318520 8318835 -194766697 - MLT1A1 LTR MaLR 0 365 10 2336 104 0 0 chr5 8319190 8319488 -194766044 - AluSg SINE Alu -10 300 3 225 270 150 10 chr5 8320017 8320117 -194765415 + MER5A DNA MER1_type 3 116 -73 4152 151 17 6 chr5 8321324 8322027 -194763505 - MER50 LTR ERV1 -23 711 1 23 33 0 0 chr5 8323053 8323083 -194762449 + AT_rich Low_complexity Low_complexity 1 30 0 656 250 83 10 chr5 8323524 8323728 -194761804 - MER20 DNA MER1_type 0 219 1 378 281 79 31 chr5 8323746 8323974 -194761558 - L1M4 LINE L1 -1380 4766 4528 25 65 0 0 chr5 8324182 8324228 -194761304 + AT_rich Low_complexity Low_complexity 1 46 0 699 244 114 0 chr5 8324446 8324647 -194760885 - MER58A DNA MER1_type 0 224 1 30 0 0 0 chr5 8324958 8324988 -194760544 + AT_rich Low_complexity Low_complexity 1 30 0 5319 76 4 3 chr5 8324988 8325674 -194759858 - L1PA7 LINE L1 -5 6149 5460 195 69 0 0 chr5 8325674 8325703 -194759829 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 5319 76 4 3 chr5 8325703 8325727 -194759805 - L1PA7 LINE L1 -694 5460 5438 624 110 0 0 chr5 8325758 8325849 -194759683 - L1P3 LINE L1 -678 5476 5386 947 114 0 0 chr5 8325869 8325992 -194759540 - AluSg SINE Alu -187 123 1 9313 104 20 7 chr5 8325992 8326931 -194758601 - L1P3 LINE L1 -747 5399 4433 290 45 23 0 chr5 8326931 8326975 -194758557 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 9313 104 20 7 chr5 8326975 8327519 -194758013 - L1P3 LINE L1 -1713 4433 3897 1523 210 0 52 chr5 8327790 8328099 -194757433 + AluJo SINE Alu 3 295 -17 1249 240 72 33 chr5 8328497 8328556 -194756976 + L1M4 LINE L1 4732 4787 -1359 2057 154 0 6 chr5 8328556 8328868 -194756664 + AluSx SINE Alu 1 310 -2 1249 240 72 33 chr5 8328868 8329449 -194756083 + L1M4 LINE L1 4787 5397 -749 395 156 0 0 chr5 8329458 8329522 -194756010 + L1PA13 LINE L1 1 64 -6723 4786 244 100 18 chr5 8329529 8331533 -194753999 + L1PA13 LINE L1 617 2794 -4003 240 59 0 0 chr5 8331588 8331622 -194753910 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 35604 36 26 1 chr5 8331622 8337116 -194748416 - L1PA3 LINE L1 -13 6142 1 2423 51 0 10 chr5 8337951 8338245 -194747287 - AluY SINE Alu -8 303 13 234 281 11 0 chr5 8339723 8339812 -194745720 - L1P2 LINE L1 -355 5799 5710 905 343 43 16 chr5 8340057 8340606 -194744926 - Zaphod DNA AcHobo -3420 611 48 428 217 11 0 chr5 8340606 8340698 -194744834 - MER58 DNA MER1_type -3 2417 2325 703 177 65 16 chr5 8340701 8340887 -194744645 - MER58 DNA MER1_type -2224 196 2 721 219 92 15 chr5 8341105 8341301 -194744231 - L1MC2 LINE L1 -25 6319 6109 1274 79 23 0 chr5 8341360 8341537 -194743995 - THE1C LTR MaLR -194 181 1 1398 171 14 27 chr5 8341568 8341860 -194743672 - MLT2C2 LTR ERVL -175 289 2 380 288 50 31 chr5 8342198 8342358 -194743174 + MIR SINE MIR 30 192 -70 1973 41 0 4 chr5 8342711 8343013 -194742519 - L1PA4 LINE L1 0 6155 5895 3130 164 25 3 chr5 8344959 8345551 -194739981 - L1MA6 LINE L1 0 6300 5696 1829 144 33 0 chr5 8346032 8346328 -194739204 + AluSc SINE Alu 1 305 0 545 273 51 16 chr5 8346847 8347100 -194738432 - L1MC5 LINE L1 -722 7239 6978 362 268 36 0 chr5 8347141 8347253 -194738279 - L1ME1 LINE L1 -12 6154 6039 318 295 129 14 chr5 8347253 8347320 -194738212 - L1ME1 LINE L1 -831 5411 5353 1983 89 19 4 chr5 8347320 8347591 -194737941 - AluSq SINE Alu 0 313 39 318 295 129 14 chr5 8347591 8347662 -194737870 - L1ME1 LINE L1 -889 5353 5257 21 0 0 0 chr5 8347899 8347920 -194737612 + AT_rich Low_complexity Low_complexity 1 21 0 726 216 13 65 chr5 8347949 8348082 -194737450 - L1MB8 LINE L1 -9 6169 6051 1248 206 68 84 chr5 8348082 8348593 -194736939 - MLT1D LTR MaLR -2 503 1 726 216 13 65 chr5 8348593 8348690 -194736842 - L1MB8 LINE L1 -127 6051 5951 21 0 0 0 chr5 8349106 8349127 -194736405 + AT_rich Low_complexity Low_complexity 1 21 0 2096 160 22 75 chr5 8349601 8350008 -194735524 - MLT1C LTR MaLR 0 467 89 2224 99 6 13 chr5 8350008 8350322 -194735210 + AluSp SINE Alu 1 312 -1 2096 160 22 75 chr5 8350322 8350407 -194735125 - MLT1C LTR MaLR -378 89 1 691 199 42 30 chr5 8352503 8352669 -194732863 + MER50 LTR ERV1 1 168 -566 * 3257 181 26 25 chr5 8352663 8353140 -194732392 + MER50 LTR ERV1 86 567 -167 2156 108 0 0 chr5 8353140 8353438 -194732094 - AluSc SINE Alu 0 298 1 3257 181 26 25 chr5 8353438 8353607 -194731925 + MER50 LTR ERV1 567 734 0 332 318 86 18 chr5 8354787 8355067 -194730465 + L1M4 LINE L1 4243 4541 -1605 1748 191 7 0 chr5 8355326 8355630 -194729902 + AluJb SINE Alu 1 306 -6 524 28 0 28 chr5 8355633 8355704 -194729828 + (GAAA)n Simple_repeat Simple_repeat 4 72 0 340 347 48 42 chr5 8355740 8356051 -194729481 + L1M4 LINE L1 4799 5111 -1035 1742 138 31 57 chr5 8356862 8357247 -194728285 + THE1C LTR MaLR 1 375 0 2467 55 7 0 chr5 8358736 8359044 -194726488 - AluY SINE Alu -1 310 1 2310 189 83 12 chr5 8360384 8360962 -194724570 - L1MC2 LINE L1 0 7747 6137 252 250 11 57 chr5 8360966 8361054 -194724478 - MLT1F1 LTR MaLR -459 108 25 470 196 130 0 chr5 8361084 8361222 -194724310 - L1MC3 LINE L1 -719 7066 6911 224 211 34 41 chr5 8362683 8362830 -194722702 + (TATAA)n Simple_repeat Simple_repeat 3 148 0 23 0 0 0 chr5 8362870 8362893 -194722639 + AT_rich Low_complexity Low_complexity 1 23 0 1249 253 180 17 chr5 8363394 8363860 -194721672 + MLT1E LTR MaLR 1 542 -51 202 136 17 34 chr5 8363878 8363937 -194721595 + (TCTA)n Simple_repeat Simple_repeat 1 58 0 501 89 40 0 chr5 8363978 8364079 -194721453 + (TCTA)n Simple_repeat Simple_repeat 2 106 0 1193 232 26 53 chr5 8364100 8364440 -194721092 - MLT2C1 LTR ERVL -65 332 2 201 259 17 0 chr5 8364967 8365025 -194720507 + (TTCA)n Simple_repeat Simple_repeat 3 61 0 27 29 0 0 chr5 8366157 8366191 -194719341 + AT_rich Low_complexity Low_complexity 1 34 0 7963 220 21 19 chr5 8367292 8369414 -194716118 + L1 LINE L1 3014 5139 -1007 2937 95 24 7 chr5 8369407 8369922 -194715610 + L1P5 LINE L1 5175 5700 -451 * 424 95 24 0 chr5 8369924 8370008 -194715524 + (TA)n Simple_repeat Simple_repeat 1 86 0 1444 105 81 0 chr5 8370242 8370490 -194715042 - L1MA1 LINE L1 0 6302 6035 4321 119 17 22 chr5 8370522 8371006 -194714526 - L1MA2 LINE L1 0 6304 5824 2108 114 7 13 chr5 8371006 8371314 -194714218 - AluSq SINE Alu -7 306 1 4321 119 17 22 chr5 8371314 8371544 -194713988 - L1MA2 LINE L1 -480 5824 5594 2049 124 7 0 chr5 8373243 8373533 -194711999 - AluSx SINE Alu -20 292 1 203 337 63 11 chr5 8374151 8374246 -194711286 - MIR SINE MIR 0 262 163 1793 265 52 42 chr5 8374545 8375242 -194710290 + L1M3e LINE L1 466 1169 -6320 1657 288 53 21 chr5 8375313 8375602 -194709930 + L1M3e LINE L1 2008 2286 -5279 225 65 0 0 chr5 8375602 8375633 -194709899 + (TAA)n Simple_repeat Simple_repeat 2 32 0 1657 288 53 21 chr5 8375633 8376170 -194709362 + L1M3e LINE L1 2286 2861 -4704 1766 179 18 25 chr5 8376205 8376601 -194708931 - L1 LINE L1 -2146 4000 3608 225 237 75 75 chr5 8377780 8377873 -194707659 + MIR SINE MIR 96 188 -74 641 221 7 0 chr5 8378070 8378206 -194707326 - FRAM SINE Alu -2 174 38 544 204 91 11 chr5 8378225 8378411 -194707121 + L1M4 LINE L1 4404 4604 -1542 398 262 54 50 chr5 8378422 8378643 -194706889 + L1MA9 LINE L1 6017 6238 -74 528 131 15 41 chr5 8378696 8379046 -194706486 + (TA)n Simple_repeat Simple_repeat 1 340 0 697 231 36 32 chr5 8379138 8379359 -194706173 + L1M4 LINE L1 4841 5062 -1084 426 308 0 8 chr5 8379376 8379496 -194706036 - L2 LINE L2 -1467 1847 1729 189 216 34 0 chr5 8379509 8379597 -194705935 + (CATATA)n Simple_repeat Simple_repeat 2 92 0 211 321 95 42 chr5 8379655 8379823 -194705709 + MIR SINE MIR 73 249 -13 21 57 0 0 chr5 8380568 8380603 -194704929 + AT_rich Low_complexity Low_complexity 1 35 0 1865 163 137 11 chr5 8381832 8382212 -194703320 - MSTA LTR MaLR 0 428 1 264 278 60 20 chr5 8384135 8384286 -194701246 + Charlie7 DNA MER1_type 2434 2590 -22 436 273 10 11 chr5 8386308 8386483 -194699049 + L1M4 LINE L1 3764 3937 -2209 189 107 0 0 chr5 8386531 8386559 -194698973 + (CATATA)n Simple_repeat Simple_repeat 6 33 0 415 324 130 12 chr5 8386581 8386927 -194698605 + L1M4 LINE L1 4139 4525 -1621 1215 194 22 86 chr5 8387519 8387843 -194697689 + MLT1B LTR MaLR 88 390 0 207 333 13 13 chr5 8387905 8387983 -194697549 - L2 LINE L2 -6 3266 3189 23 33 0 0 chr5 8388823 8388853 -194696679 + AT_rich Low_complexity Low_complexity 1 30 0 1964 130 161 34 chr5 8389076 8389403 -194696129 + MSTA LTR MaLR 3 386 -42 2150 106 21 58 chr5 8389403 8389779 -194695753 - THE1B LTR MaLR 0 364 3 1964 130 161 34 chr5 8389779 8389829 -194695703 + MSTA LTR MaLR 386 428 0 24 53 0 0 chr5 8389882 8389920 -194695612 + AT_rich Low_complexity Low_complexity 1 38 0 345 329 57 33 chr5 8390565 8390865 -194694667 + L1M4 LINE L1 2893 3224 -2922 433 260 86 88 chr5 8390941 8391233 -194694299 + L1M4 LINE L1 4266 4558 -1588 798 21 0 0 chr5 8391233 8391326 -194694206 + L1PA5 LINE L1 6056 6148 -6 433 260 86 88 chr5 8391326 8391417 -194694115 + L1M4 LINE L1 4558 4648 -1498 1497 203 6 19 chr5 8391505 8391820 -194693712 + AluJo SINE Alu 1 311 -1 2272 117 3 0 chr5 8391915 8392223 -194693309 + AluSg SINE Alu 1 309 -1 599 253 78 60 chr5 8393232 8393814 -194691718 + L1M3a LINE L1 1011 1585 -4811 3815 115 21 2 chr5 8393814 8394388 -194691144 + L1PA15 LINE L1 5578 6162 -3 599 253 78 60 chr5 8394388 8394494 -194691038 + L1M3a LINE L1 1585 1688 -4708 822 55 9 0 chr5 8394506 8394615 -194690917 + L1PA4 LINE L1 6043 6152 -3 999 213 42 42 chr5 8395241 8395480 -194690052 - MER8 DNA MER2_type 0 239 1 354 216 14 0 chr5 8395500 8395574 -194689958 - L1ME2 LINE L1 -15 6149 6075 21 36 0 0 chr5 8395944 8395972 -194689560 + AT_rich Low_complexity Low_complexity 1 28 0 346 223 11 43 chr5 8396398 8396492 -194689040 + MER8 DNA MER2_type 96 186 -53 2056 125 0 10 chr5 8396880 8397177 -194688355 + AluSg SINE Alu 1 294 -16 675 35 0 0 chr5 8397341 8397427 -194688105 - L1PA4 LINE L1 -3 6152 6067 23 0 0 0 chr5 8397454 8397477 -194688055 + AT_rich Low_complexity Low_complexity 1 23 0 2371 89 3 0 chr5 8400319 8400623 -194684909 + AluSp SINE Alu 1 305 -8 2476 18 0 0 chr5 8400756 8401029 -194684503 + AluYb8 SINE Alu 36 308 -10 977 155 0 7 chr5 8401936 8402091 -194683441 + THE1-int LTR MaLR 922 1075 -505 2707 189 33 2 chr5 8402192 8402693 -194682839 + MSTA-int LTR MaLR 1124 1643 -8 2457 151 48 22 chr5 8402701 8403118 -194682414 + MSTA LTR MaLR 1 428 0 211 273 269 33 chr5 8403732 8404003 -194681529 + L2 LINE L2 1765 2099 -1215 275 324 182 42 chr5 8404474 8405161 -194680371 + L2 LINE L2 2472 3253 -19 42896 37 24 4 chr5 8405913 8411936 -194673596 + L1PA3 LINE L1 13 6155 0 5051 167 16 6 chr5 8412372 8413228 -194672304 + MER49 LTR ERV1 1 865 -58 2385 86 0 16 chr5 8413271 8413585 -194671947 - AluY SINE Alu -2 309 1 254 257 16 44 chr5 8416195 8416378 -194669154 + (CAA)n Simple_repeat Simple_repeat 3 180 0 223 261 18 42 chr5 8416596 8416761 -194668771 + (CAA)n Simple_repeat Simple_repeat 3 163 0 22 88 0 0 chr5 8417375 8417432 -194668100 + AT_rich Low_complexity Low_complexity 1 57 0 382 331 78 9 chr5 8417476 8417807 -194667725 - L1ME3 LINE L1 -337 5825 5455 196 109 22 22 chr5 8417809 8417855 -194667677 + (TA)n Simple_repeat Simple_repeat 2 47 0 250 310 62 9 chr5 8418404 8418517 -194667015 + MIR SINE MIR 143 261 -1 3339 128 18 22 chr5 8418828 8419383 -194666149 + L1MA6 LINE L1 5742 6294 -6 22 0 0 0 chr5 8419391 8419413 -194666119 + AT_rich Low_complexity Low_complexity 1 22 0 282 226 0 48 chr5 8419569 8419653 -194665879 - L1M4 LINE L1 -3024 3122 3043 434 221 69 8 chr5 8419654 8419785 -194665747 - L1M4 LINE L1 -3053 3093 2955 744 194 106 17 chr5 8419795 8420032 -194665500 - MER58 DNA MER1_type -2 2418 2161 397 217 8 70 chr5 8420206 8420335 -194665197 - L2 LINE L2 0 3313 3193 3097 216 49 10 chr5 8420384 8421115 -194664417 - L1 LINE L1 -1193 4953 4194 29 60 0 0 chr5 8421328 8421378 -194664154 + AT_rich Low_complexity Low_complexity 1 50 0 2081 110 3 7 chr5 8421961 8422251 -194663281 + AluSc SINE Alu 3 291 -18 22 56 0 0 chr5 8422528 8422564 -194662968 + AT_rich Low_complexity Low_complexity 1 36 0 376 160 12 8 chr5 8422606 8422684 -194662848 + THE1C LTR MaLR 1 79 -276 225 191 0 0 chr5 8422690 8422737 -194662795 - L1P LINE L1 -1774 4372 4326 1779 162 18 30 chr5 8422739 8423073 -194662459 + THE1C LTR MaLR 46 375 0 207 271 0 0 chr5 8423676 8423724 -194661808 + CT-rich Low_complexity Low_complexity 4 51 0 1718 57 13 44 chr5 8424558 8424787 -194660745 - AluY SINE Alu -11 300 79 731 256 58 18 chr5 8424852 8425075 -194660457 + MIR SINE MIR 31 262 0 1310 174 42 51 chr5 8425132 8425280 -194660252 + MER33 DNA MER1_type 9 157 -2428 1705 56 0 0 chr5 8425280 8425507 -194660025 - AluY SINE Alu 0 312 86 1310 174 42 51 chr5 8425507 8425668 -194659864 + MER33 DNA MER1_type 157 316 -8 203 411 11 39 chr5 8426578 8426758 -194658774 - L3 LINE CR1 -34 1543 1369 4713 297 96 27 chr5 8427153 8428993 -194656539 + L2 LINE L2 420 2461 -853 279 0 0 0 chr5 8428993 8429024 -194656508 + (CA)n Simple_repeat Simple_repeat 2 32 0 4713 297 96 27 chr5 8429024 8429565 -194655967 + L2 LINE L2 2461 2964 -350 206 129 61 38 chr5 8429718 8429850 -194655682 + (TA)n Simple_repeat Simple_repeat 1 135 0 364 275 53 23 chr5 8429906 8430037 -194655495 + L2 LINE L2 3175 3309 -4 235 335 163 10 chr5 8430051 8430260 -194655272 - L3 LINE CR1 -96 1481 1241 409 254 46 56 chr5 8430932 8431129 -194654403 + MLT1F-int LTR MaLR 1163 1357 -14 993 284 104 6 chr5 8431156 8431491 -194654041 + MLT1F LTR MaLR 1 368 -174 202 286 250 27 chr5 8431600 8431712 -194653820 - L2 LINE L2 -10 3262 3126 224 272 66 73 chr5 8431977 8432113 -194653419 - L2 LINE L2 -337 2976 2842 2742 118 3 6 chr5 8432305 8432670 -194652862 + THE1B LTR MaLR 1 364 0 345 288 96 0 chr5 8434083 8434208 -194651324 - MLT1F LTR MaLR -403 139 3 768 0 0 0 chr5 8438500 8438587 -194646945 - L1HS LINE L1 -2 6153 6067 2374 158 27 54 chr5 8440562 8440863 -194644669 - MLT1C LTR MaLR 0 467 182 1565 189 10 30 chr5 8440863 8441165 -194644367 - AluJo SINE Alu -16 296 1 2374 158 27 54 chr5 8441165 8441343 -194644189 - MLT1C LTR MaLR -285 182 1 23 33 0 0 chr5 8443063 8443093 -194642439 + AT_rich Low_complexity Low_complexity 1 30 0 4185 134 46 65 chr5 8443500 8444300 -194641232 + LTR1 LTR ERV1 1 785 0 425 329 22 36 chr5 8444475 8444700 -194640832 + MIR SINE MIR 29 250 -12 1522 148 19 11 chr5 8444904 8445174 -194640358 + L1MA8 LINE L1 6013 6284 -7 2548 84 0 0 chr5 8445228 8445539 -194639993 - AluSx SINE Alu -1 311 1 2455 170 34 5 chr5 8446190 8446637 -194638895 + L1MA4 LINE L1 5426 5885 -415 * 30560 115 7 22 chr5 8446635 8452792 -194632740 + L1PA7 LINE L1 316 6469 0 234 242 81 0 chr5 8453086 8453148 -194632384 + MIR SINE MIR 90 156 -106 1470 183 17 56 chr5 8453225 8453581 -194631951 + MLT1B LTR MaLR 1 342 -48 1914 105 14 31 chr5 8453581 8454081 -194631451 - MER51B LTR ERV1 0 377 1 353 68 0 0 chr5 8454081 8454125 -194631407 + MLT1B LTR MaLR 339 382 -8 21 0 0 0 chr5 8454675 8454696 -194630836 + AT_rich Low_complexity Low_complexity 1 21 0 206 250 95 24 chr5 8455790 8455874 -194629658 - L3 LINE CR1 -881 696 607 362 300 137 23 chr5 8456125 8456432 -194629100 - LTR16A LTR ERVL -5 445 104 28 29 0 0 chr5 8456969 8457004 -194628528 + AT_rich Low_complexity Low_complexity 1 35 0 22 70 0 0 chr5 8457150 8457193 -194628339 + AT_rich Low_complexity Low_complexity 1 43 0 201 315 12 30 chr5 8457889 8458024 -194627508 - MIR3 SINE MIR -53 155 23 2820 164 25 2 chr5 8460253 8460770 -194624762 - Tigger1 DNA MER2_type 0 2418 1890 913 195 53 73 chr5 8460794 8461096 -194624436 - PABL_B LTR ERV1 -23 644 349 306 327 23 55 chr5 8461102 8461319 -194624213 - PABL_B LTR ERV1 -457 210 1 5476 133 7 14 chr5 8461319 8462240 -194623292 - Tigger1 DNA MER2_type -534 1884 971 2479 84 0 0 chr5 8462484 8462794 -194622738 - AluY SINE Alu -1 310 1 4000 91 10 15 chr5 8462798 8463382 -194622150 - L1PA10 LINE L1 0 6168 5588 1751 136 58 14 chr5 8463382 8463918 -194621614 + L1PA10 LINE L1 4996 5558 -610 1078 237 159 0 chr5 8464097 8464469 -194621063 - MER74C LTR ERVL -27 433 3 192 77 0 0 chr5 8464469 8464495 -194621037 + (GAAAA)n Simple_repeat Simple_repeat 5 30 0 285 223 0 0 chr5 8465289 8465383 -194620149 + (TA)n Simple_repeat Simple_repeat 2 95 0 227 267 40 79 chr5 8465400 8465501 -194620031 + MIR3 SINE MIR 77 173 -35 526 223 32 13 chr5 8467035 8467192 -194618340 - L1MA10 LINE L1 -1 6333 6174 1395 204 106 31 chr5 8467206 8467594 -194617938 - L1MA9 LINE L1 -2 6310 5894 23 33 0 0 chr5 8467679 8467709 -194617823 + AT_rich Low_complexity Low_complexity 1 30 0 277 250 0 0 chr5 8469018 8469078 -194616454 + MER81 DNA DNA 29 88 -26 230 219 0 0 chr5 8470871 8470912 -194614620 + (TG)n Simple_repeat Simple_repeat 2 42 0 1229 256 20 6 chr5 8471587 8471931 -194613601 - MER89 LTR ERV1 -14 545 197 457 161 23 0 chr5 8471904 8471991 -194613541 - MER89 LTR ERV1 -470 89 1 * 2285 98 0 0 chr5 8473128 8473424 -194612108 + AluSq SINE Alu 1 296 -17 370 226 11 11 chr5 8476713 8476806 -194608726 - LTR16B LTR ERVL 0 464 372 291 314 188 19 chr5 8476815 8477124 -194608408 - L2 LINE L2 -1091 2223 1863 277 342 124 29 chr5 8477136 8477411 -194608121 - L2 LINE L2 -2782 532 232 43 20 0 0 chr5 8479094 8479144 -194606388 + AT_rich Low_complexity Low_complexity 1 50 0 1497 142 22 4 chr5 8479145 8479413 -194606119 - L1MA5A LINE L1 -4 6293 6021 487 268 18 0 chr5 8479561 8479725 -194605807 + L1MCa LINE L1 2064 2230 -4196 23 0 0 0 chr5 8479937 8479960 -194605572 + AT_rich Low_complexity Low_complexity 1 23 0 338 342 94 58 chr5 8481460 8481595 -194603937 - L2 LINE L2 0 3272 3143 2087 189 17 7 chr5 8481595 8482014 -194603518 + L1MA5 LINE L1 5871 6293 -7 338 342 94 58 chr5 8482014 8482241 -194603291 - L2 LINE L2 -129 3143 2897 369 122 0 10 chr5 8482412 8482496 -194603036 + L1PB4 LINE L1 5703 5784 -370 359 156 28 45 chr5 8482509 8482688 -194602844 + (TA)n Simple_repeat Simple_repeat 1 176 0 735 147 31 0 chr5 8482695 8482824 -194602708 + L1PB4 LINE L1 5776 5908 -248 4747 181 34 36 chr5 8482850 8484445 -194601087 - L1P5 LINE L1 -537 5617 4007 600 205 19 0 chr5 8484431 8484587 -194600945 + L1P5 LINE L1 3844 4002 -2144 * 600 290 22 11 chr5 8485828 8486011 -194599521 + MER5A DNA MER1_type 5 189 0 434 36 0 0 chr5 8486158 8486213 -194599319 - L1P LINE L1 -742 5413 5359 6195 29 1 0 chr5 8486213 8486937 -194598595 + L1PA3 LINE L1 5426 6152 -3 2466 72 0 0 chr5 8487310 8487602 -194597930 + AluY SINE Alu 1 292 -19 496 358 59 11 chr5 8487670 8487941 -194597591 - L2 LINE L2 -619 2695 2412 1705 186 3 43 chr5 8488473 8488528 -194597004 + MLT1A1 LTR MaLR 31 87 -278 1755 161 13 26 chr5 8488528 8488838 -194596694 + AluSx SINE Alu 1 306 -6 1705 186 3 43 chr5 8488838 8489131 -194596401 + MLT1A1 LTR MaLR 87 365 0 1415 190 196 0 chr5 8491069 8491427 -194594105 + MSTA LTR MaLR 1 428 0 215 351 60 8 chr5 8491510 8491644 -194593888 - MIR SINE MIR -3 259 119 399 41 0 0 chr5 8491888 8491937 -194593595 + (TAAA)n Simple_repeat Simple_repeat 1 49 0 1880 142 17 3 chr5 8492083 8492372 -194593160 - AluSx SINE Alu -19 293 1 416 136 15 0 chr5 8492415 8492481 -194593051 + AluS SINE Alu 1 67 -246 21 36 0 0 chr5 8493132 8493160 -194592372 + AT_rich Low_complexity Low_complexity 1 28 0 242 246 35 18 chr5 8495655 8495769 -194589763 + (TA)n Simple_repeat Simple_repeat 2 117 0 243 79 0 0 chr5 8497929 8497967 -194587565 + (TTCC)n Simple_repeat Simple_repeat 3 40 0 795 80 40 23 chr5 8497973 8498148 -194587384 + CT-rich Low_complexity Low_complexity 1 178 0 593 201 12 12 chr5 8498159 8498328 -194587204 + CT-rich Low_complexity Low_complexity 1 169 0 835 209 25 6 chr5 8498328 8498491 -194587041 - FRAM SINE Alu 0 166 1 21 0 0 0 chr5 8498898 8498919 -194586613 + AT_rich Low_complexity Low_complexity 1 21 0 216 350 49 7 chr5 8499896 8500039 -194585493 + L3 LINE CR1 1220 1368 -209 1934 114 21 25 chr5 8500067 8500347 -194585185 - AluSx SINE Alu -9 303 25 779 206 119 0 chr5 8500465 8500659 -194584873 - MER58A DNA MER1_type -1 223 7 328 344 129 46 chr5 8500798 8501208 -194584324 + L3 LINE CR1 1010 1453 -124 186 103 0 0 chr5 8501334 8501363 -194584169 + (T)n Simple_repeat Simple_repeat 1 29 0 4292 88 7 2 chr5 8501372 8501982 -194583550 - THE1B-int LTR MaLR -967 613 1 2091 133 44 33 chr5 8501982 8502342 -194583190 - THE1B LTR MaLR 0 364 1 774 156 143 111 chr5 8502359 8502603 -194582929 + MLT1B LTR MaLR 139 390 0 6914 68 13 0 chr5 8502807 8504038 -194581494 - L1PA8 LINE L1 -4 6168 4930 3271 28 0 0 chr5 8504398 8504795 -194580737 + L1PA4 LINE L1 5463 5859 -296 803 186 56 0 chr5 8504795 8504956 -194580576 + MLT1A1 LTR MaLR 196 365 0 4033 200 13 17 chr5 8505629 8506528 -194579004 + L1MCa LINE L1 302 1197 -5229 2258 233 2 2 chr5 8506556 8507019 -194578513 + L1PA13 LINE L1 1 463 -6324 5422 223 33 13 chr5 8507021 8508523 -194577009 + L1PA13 LINE L1 2532 4063 -2734 2941 168 11 13 chr5 8508540 8509078 -194576454 + L1PA15 LINE L1 5616 6154 -11 180 0 0 0 chr5 8509078 8509098 -194576434 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 1098 194 92 9 chr5 8509112 8509437 -194576095 + L1MCa LINE L1 1210 1561 -4865 1923 159 25 27 chr5 8509438 8509803 -194575729 - THE1B LTR MaLR 0 364 1 2441 83 0 11 chr5 8509803 8510152 -194575380 - THE1B-int LTR MaLR 0 1580 1236 3094 87 2 68 chr5 8510164 8510668 -194574864 + MER9 LTR ERVK 41 511 0 2736 94 10 5 chr5 8510668 8511070 -194574462 + HERVK9 LTR ERVK 1 404 -5512 608 122 0 0 chr5 8511086 8511168 -194574364 - AluS SINE Alu -231 82 1 687 113 0 17 chr5 8511807 8511922 -194573610 - MER85 DNA T2_type 0 139 27 201 194 48 29 chr5 8512607 8512710 -194572822 + (TATAA)n Simple_repeat Simple_repeat 4 108 0 216 313 36 24 chr5 8513649 8513732 -194571800 - L2 LINE L2 -554 2760 2677 23 0 0 0 chr5 8514307 8514330 -194571202 + AT_rich Low_complexity Low_complexity 1 23 0 342 279 29 29 chr5 8514832 8514936 -194570596 - MER5B DNA MER1_type -63 115 12 4451 223 99 81 chr5 8515024 8517087 -194568445 + L1MDa LINE L1 1 2100 -4440 4386 236 54 30 chr5 8517055 8517932 -194567600 + L1MDa LINE L1 2385 3239 -3301 * 1704 179 0 48 chr5 8517932 8518108 -194567424 - AluJo SINE Alu -14 298 142 2167 107 19 10 chr5 8518108 8518417 -194567115 - AluSp SINE Alu -1 312 1 1704 179 0 48 chr5 8518417 8518553 -194566979 - AluJo SINE Alu -170 142 1 4386 236 54 30 chr5 8518553 8519493 -194566039 + L1MDa LINE L1 3239 4244 -2296 588 330 36 28 chr5 8519725 8520083 -194565449 + MLT1I LTR MaLR 47 407 -2 29 0 0 0 chr5 8520175 8520204 -194565328 + AT_rich Low_complexity Low_complexity 1 29 0 2349 58 0 7 chr5 8520663 8520956 -194564576 + AluY SINE Alu 1 291 -20 2823 10 0 0 chr5 8520958 8521266 -194564266 + AluY SINE Alu 1 308 -3 1638 206 30 30 chr5 8523024 8523389 -194562143 + MLT1A1 LTR MaLR 1 365 0 417 292 64 9 chr5 8524442 8524661 -194560871 + L1MEc LINE L1 1585 1815 -4581 1066 219 99 44 chr5 8524700 8525153 -194560379 - Charlie1b DNA MER1_type -6 517 40 25 31 0 0 chr5 8525176 8525208 -194560324 + AT_rich Low_complexity Low_complexity 1 32 0 620 257 70 63 chr5 8525213 8526144 -194559388 + L1MEc LINE L1 1871 2769 -3446 797 253 64 9 chr5 8526165 8526584 -194558948 + L1MEc LINE L1 2819 3260 -2955 6019 200 70 20 chr5 8526627 8527965 -194557567 + L1MCa LINE L1 49 1475 -4951 2569 115 13 8 chr5 8527965 8528338 -194557194 - THE1C LTR MaLR 0 375 1 6019 200 70 20 chr5 8528338 8528537 -194556995 + L1MCa LINE L1 1475 1663 -4763 2978 218 60 42 chr5 8528542 8529672 -194555860 - L1M1 LINE L1 -4161 3405 2098 761 175 0 0 chr5 8529717 8529837 -194555695 - FLAM_C SINE Alu -19 124 5 2884 226 53 7 chr5 8529900 8530780 -194554752 + L1 LINE L1 3036 3956 -2190 37 23 0 0 chr5 8530911 8530955 -194554577 + AT_rich Low_complexity Low_complexity 1 44 0 1320 271 58 23 chr5 8531120 8531409 -194554123 + L1MCa LINE L1 3026 3303 -3123 2177 109 14 0 chr5 8531409 8531702 -194553830 + AluSx SINE Alu 1 297 -15 1320 271 58 23 chr5 8531702 8532120 -194553412 + L1MCa LINE L1 3303 3758 -2668 230 250 0 15 chr5 8532455 8532523 -194553009 + L1MC4 LINE L1 6637 6703 -1339 331 151 41 0 chr5 8532523 8532596 -194552936 + (CATATA)n Simple_repeat Simple_repeat 2 77 0 188 247 108 11 chr5 8533078 8533171 -194552361 + MIR SINE MIR 21 122 -86 183 323 10 42 chr5 8533395 8533491 -194552041 + MIR SINE MIR 99 191 -71 207 255 20 0 chr5 8535092 8535143 -194550389 + CT-rich Low_complexity Low_complexity 3 54 0 1500 209 16 33 chr5 8535198 8535456 -194550076 - MLT1A1 LTR MaLR -2 363 111 2380 140 48 27 chr5 8535456 8535869 -194549663 + MSTB LTR MaLR 5 426 0 1500 209 16 33 chr5 8535869 8535978 -194549554 - MLT1A1 LTR MaLR -254 111 2 2308 82 0 0 chr5 8536548 8536840 -194548692 + AluY SINE Alu 6 297 -14 349 93 147 27 chr5 8537007 8537082 -194548450 - L1PB1 LINE L1 -1 6150 6067 185 261 22 0 chr5 8537148 8537194 -194548338 + MIR SINE MIR 56 102 -160 696 242 54 112 chr5 8537589 8538052 -194547480 - LTR40c LTR ERVL -29 436 1 862 185 42 21 chr5 8538986 8539175 -194546357 + MLT1D LTR MaLR 1 193 -312 3144 229 286 23 chr5 8539178 8541391 -194544141 + L1M3e LINE L1 1 2790 -4317 1687 184 44 49 chr5 8541395 8541802 -194543730 - MSTC LTR MaLR -23 405 1 3514 247 102 109 chr5 8541802 8543019 -194542513 - MSTC-int LTR MaLR 0 1735 434 705 134 0 0 chr5 8543019 8543297 -194542235 + AluSg/x SINE Alu 185 462 0 3514 247 102 109 chr5 8543297 8543727 -194541805 - MSTC-int LTR MaLR -1301 434 2 1621 176 116 59 chr5 8543729 8544133 -194541399 - MSTC LTR MaLR 0 428 2 1090 244 174 16 chr5 8544134 8544871 -194540661 + L1MA8 LINE L1 2919 3773 -3792 * 2961 192 40 38 chr5 8544867 8545485 -194540047 + L1MA8 LINE L1 4466 5088 -2477 1643 214 0 3 chr5 8545485 8545796 -194539736 + AluJb SINE Alu 1 310 0 2961 192 40 38 chr5 8545796 8546011 -194539521 + L1MA8 LINE L1 5088 5301 -2264 1708 166 15 207 chr5 8546179 8546908 -194538624 + MER21A LTR ERV1 70 658 -273 6914 153 39 6 chr5 8546908 8549161 -194536371 + L1MA8 LINE L1 5340 7656 -54 491 273 98 69 chr5 8549163 8549614 -194535918 + L2 LINE L2 2469 2932 -382 277 169 84 28 chr5 8549619 8549690 -194535842 + MLT1B LTR MaLR 2 76 -314 375 368 78 59 chr5 8550222 8550646 -194534886 + L2 LINE L2 2828 3259 -13 279 0 0 0 chr5 8550663 8550694 -194534838 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 213 307 64 45 chr5 8551777 8551979 -194533553 + L2 LINE L2 1623 1828 -1486 910 84 0 53 chr5 8552002 8552027 -194533505 + (TTCC)n Simple_repeat Simple_repeat 1 203 0 910 84 0 53 chr5 8552027 8552217 -194533315 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 433 145 29 29 chr5 8552242 8552380 -194533152 + CT-rich Low_complexity Low_complexity 3 140 0 223 331 72 22 chr5 8552595 8552734 -194532798 + L2 LINE L2 2976 3121 -192 353 304 22 14 chr5 8552867 8553005 -194532527 - MIR SINE MIR -59 203 65 3417 151 16 71 chr5 8553424 8554155 -194531377 + LTR8 LTR ERV1 1 691 0 230 285 174 25 chr5 8554248 8554483 -194531049 - MLT1J2 LTR MaLR -128 322 53 671 174 81 19 chr5 8557176 8557337 -194528195 + MLT1B LTR MaLR 3 173 -217 357 321 30 0 chr5 8557384 8557435 -194528097 + CT-rich Low_complexity Low_complexity 2 50 -86 1784 171 26 20 chr5 8557435 8557740 -194527792 - AluJb SINE Alu -2 310 4 357 321 30 0 chr5 8557740 8557819 -194527713 + CT-rich Low_complexity Low_complexity 50 136 0 1091 170 20 0 chr5 8557819 8558019 -194527513 + MLT1B LTR MaLR 187 390 0 268 337 22 17 chr5 8558290 8558451 -194527081 + MIR SINE MIR 9 165 -60 383 268 96 19 chr5 8558729 8558886 -194526646 + MIR SINE MIR 48 216 -46 2060 149 0 0 chr5 8560593 8560886 -194524646 + AluSx SINE Alu 1 296 -16 257 0 30 0 chr5 8560886 8560919 -194524613 + (GGAA)n Simple_repeat Simple_repeat 3 36 0 2060 149 0 0 chr5 8560919 8560934 -194524598 + AluSx SINE Alu 295 309 -3 211 325 90 32 chr5 8561524 8561671 -194523861 - MIR SINE MIR -63 145 19 31 26 0 0 chr5 8561854 8561892 -194523640 + AT_rich Low_complexity Low_complexity 1 38 0 465 297 82 39 chr5 8562027 8562283 -194523249 - L1M4c LINE L1 -4905 1479 1213 342 335 5 5 chr5 8562307 8562498 -194523034 + L1MEc LINE L1 1518 1708 -4688 622 297 97 56 chr5 8562534 8563017 -194522515 + L1MEc LINE L1 1768 2332 -4064 834 272 119 48 chr5 8563052 8563451 -194522081 + L1M4 LINE L1 3908 4277 -1869 1764 203 7 47 chr5 8563451 8563855 -194521677 - MLT1B LTR MaLR -2 388 1 834 272 119 48 chr5 8563855 8564621 -194520911 + L1M4 LINE L1 4277 5156 -990 669 172 57 9 chr5 8565106 8565275 -194520257 + MSTC LTR MaLR 1 204 -224 315 132 0 0 chr5 8565309 8565362 -194520170 + MSTC LTR MaLR 364 416 -12 295 341 142 24 chr5 8565657 8566031 -194519501 + L2 LINE L2 1282 1752 -1562 2075 82 25 11 chr5 8566031 8566343 -194519189 + AluSx SINE Alu 1 316 0 295 341 142 24 chr5 8566343 8566553 -194518979 + L2 LINE L2 1752 1936 -1378 42 37 0 37 chr5 8567821 8567903 -194517629 + AT_rich Low_complexity Low_complexity 1 79 0 1230 186 125 18 chr5 8567939 8568106 -194517426 - AluJb SINE Alu -3 309 161 216 0 0 0 chr5 8568106 8568130 -194517402 + (TAG)n Simple_repeat Simple_repeat 1 24 0 1230 186 125 18 chr5 8568130 8568241 -194517291 - AluJb SINE Alu -151 161 1 285 248 133 0 chr5 8568616 8568729 -194516803 + LTR16A LTR ERVL 323 450 0 829 123 77 0 chr5 8568902 8569032 -194516500 - AluSg/x SINE Alu -16 294 155 264 233 0 0 chr5 8570045 8570118 -194515414 + (TG)n Simple_repeat Simple_repeat 2 74 0 238 314 58 23 chr5 8570326 8570498 -194515034 - MLT1J LTR MaLR -98 413 236 1035 156 19 0 chr5 8570545 8570705 -194514827 - U1 snRNA snRNA 0 165 3 228 297 44 0 chr5 8570766 8570857 -194514675 - MLT1J LTR MaLR -344 167 73 2508 122 8 3 chr5 8571031 8571393 -194514139 + THE1B LTR MaLR 1 364 0 611 111 11 0 chr5 8571700 8571790 -194513742 + AluSc SINE Alu 216 306 -3 211 383 47 0 chr5 8571993 8572100 -194513432 - MIR SINE MIR -20 242 131 384 219 117 16 chr5 8572196 8572324 -194513208 + MLT1K LTR MaLR 418 558 -30 2102 205 100 4 chr5 8574661 8575169 -194510363 - MER89 LTR ERV1 -2 557 1 216 364 64 12 chr5 8575197 8575370 -194510162 - MIR SINE MIR -60 202 21 11232 49 0 0 chr5 8575935 8578103 -194507429 + L1PA5 LINE L1 3983 6150 -4 2182 184 49 2 chr5 8578274 8578681 -194506851 - MSTB LTR MaLR 0 426 1 301 282 127 0 chr5 8579412 8579522 -194506010 - MER94 DNA DNA 0 134 11 454 144 0 44 chr5 8579737 8579827 -194505705 + AluS SINE Alu 223 308 -1 192 372 99 33 chr5 8580188 8580309 -194505223 - MIR3 SINE MIR -27 181 53 241 323 16 48 chr5 8580346 8580470 -194505062 - L2 LINE L2 -1 3312 3193 1531 230 53 45 chr5 8583457 8583949 -194501583 - MLT1D LTR MaLR -9 496 1 221 83 28 0 chr5 8584957 8584993 -194500539 + (TTTA)n Simple_repeat Simple_repeat 2 38 0 8905 99 25 6 chr5 8585494 8586751 -194498781 + HSMAR1 DNA Mariner 4 1284 -3 241 233 27 0 chr5 8587418 8587491 -194498041 + L1MC4 LINE L1 6624 6698 -1344 221 276 0 0 chr5 8587502 8587560 -194497972 + (TA)n Simple_repeat Simple_repeat 2 59 0 2163 98 9 0 chr5 8589075 8589560 -194495972 + MER41A LTR ERV1 1 528 -107 295 309 11 0 chr5 8589573 8589667 -194495865 + L1ME LINE L1 3797 3891 -2255 1734 159 12 72 chr5 8590014 8590416 -194495116 + MLT1B LTR MaLR 13 390 0 346 298 116 0 chr5 8590902 8591083 -194494449 + MLT1G3 LTR MaLR 155 356 -174 422 327 186 4 chr5 8591664 8591927 -194493605 + L1ME LINE L1 5512 5822 -299 319 49 0 0 chr5 8591946 8591987 -194493545 + AluY SINE Alu 7 47 -255 2455 76 0 0 chr5 8592383 8592674 -194492858 - AluSg SINE Alu -19 291 1 321 26 0 0 chr5 8592714 8592752 -194492780 + (CA)n Simple_repeat Simple_repeat 2 39 0 243 125 0 0 chr5 8593245 8593285 -194492247 + (TC)n Simple_repeat Simple_repeat 2 41 0 276 30 0 0 chr5 8593287 8593320 -194492212 + (CA)n Simple_repeat Simple_repeat 1 33 0 632 188 8 1 chr5 8593700 8593715 -194491817 + L1P5 LINE L1 5560 5573 -583 532 196 0 0 chr5 8593715 8593817 -194491715 - L1PB4 LINE L1 0 6156 6055 632 188 8 1 chr5 8593817 8593949 -194491583 + L1P5 LINE L1 5573 5706 -450 2576 34 0 3 chr5 8594236 8594533 -194490999 + AluY SINE Alu 1 296 -15 1375 206 23 30 chr5 8597178 8597479 -194488053 - AluJb SINE Alu -13 299 1 1179 252 72 31 chr5 8598841 8599285 -194486247 - MLT1C LTR MaLR -5 462 1 5354 101 14 9 chr5 8599442 8600247 -194485285 + L1PA13 LINE L1 5347 6155 -8 667 182 35 0 chr5 8601203 8601346 -194484186 - L1 LINE L1 -900 5246 5099 859 194 66 0 chr5 8601379 8601590 -194483942 + L1M3 LINE L1 5254 5478 -856 2063 109 0 18 chr5 8601726 8602034 -194483498 - AluSg SINE Alu 0 303 1 2664 249 61 17 chr5 8602058 8603341 -194482191 - L1ME1 LINE L1 -5 6144 4808 1139 266 57 36 chr5 8603342 8604067 -194481465 - L1ME1 LINE L1 -4412 1898 1122 2243 118 3 0 chr5 8604257 8604562 -194480970 + AluSx SINE Alu 1 306 -6 323 288 75 27 chr5 8604738 8604884 -194480648 - L1ME1 LINE L1 -5917 202 50 2235 107 3 3 chr5 8605544 8605843 -194479689 + AluSq SINE Alu 1 299 -14 21 0 0 0 chr5 8608214 8608235 -194477297 + AT_rich Low_complexity Low_complexity 1 21 0 203 244 0 110 chr5 8608397 8608479 -194477053 + L2 LINE L2 3137 3209 -63 252 122 0 0 chr5 8611029 8611070 -194474462 + (GGAA)n Simple_repeat Simple_repeat 3 43 0 2181 122 81 57 chr5 8612989 8613171 -194472361 - MSTA LTR MaLR 0 428 252 2284 68 0 4 chr5 8613171 8613452 -194472080 - AluY SINE Alu -4 307 28 2181 122 81 57 chr5 8613452 8613687 -194471845 - MSTA LTR MaLR -176 252 1 236 224 0 26 chr5 8617673 8617716 -194467816 + A-rich Low_complexity Low_complexity 5 47 -31 1245 51 0 0 chr5 8617716 8617872 -194467660 + L1PA5 LINE L1 5998 6153 -1 236 224 0 26 chr5 8617872 8617904 -194467628 + A-rich Low_complexity Low_complexity 47 78 0 1729 167 3 15 chr5 8618207 8618537 -194466995 + L1MC/D LINE L1 5426 5751 -2034 4130 141 65 23 chr5 8618650 8619436 -194466096 - LTR1B LTR ERV1 -7 819 1 21 36 0 0 chr5 8619754 8619782 -194465750 + AT_rich Low_complexity Low_complexity 1 28 0 224 344 57 8 chr5 8622303 8622425 -194463107 - MIR SINE MIR -66 196 69 385 274 76 32 chr5 8622491 8622648 -194462884 - MIR SINE MIR -13 249 86 180 0 0 0 chr5 8624930 8624950 -194460582 + (T)n Simple_repeat Simple_repeat 1 20 0 509 159 215 0 chr5 8626541 8626648 -194458884 + FLAM_A SINE Alu 1 130 -3 4396 140 12 65 chr5 8627348 8628264 -194457268 - L1MA4 LINE L1 -6 6294 5428 2697 167 55 2 chr5 8628264 8628919 -194456613 + L1MA4 LINE L1 4743 5437 -743 6063 241 66 22 chr5 8629034 8630667 -194454865 + L1ME1 LINE L1 2359 4129 -2017 2570 71 0 0 chr5 8630667 8630976 -194454556 + AluY SINE Alu 1 309 -2 6063 241 66 22 chr5 8630976 8631720 -194453812 + L1ME1 LINE L1 4129 4839 -1307 616 204 6 78 chr5 8631724 8631891 -194453641 + Tigger2a DNA MER2_type 1 155 -279 729 200 8 0 chr5 8631907 8632032 -194453500 + Tigger2a DNA MER2_type 308 433 -1 2147 233 69 32 chr5 8632050 8633325 -194452207 + L1ME1 LINE L1 4858 6332 -2 2075 164 42 11 chr5 8633340 8633718 -194451814 + MLT1B LTR MaLR 1 390 0 248 302 129 72 chr5 8634852 8635170 -194450362 + L2 LINE L2 2931 3266 -6 272 339 74 83 chr5 8635230 8635664 -194449868 - L2 LINE L2 -1 3271 2842 264 30 0 0 chr5 8635839 8635872 -194449660 + (TGGA)n Simple_repeat Simple_repeat 1 33 0 2243 148 28 14 chr5 8637322 8637681 -194447851 + THE1B LTR MaLR 1 364 0 11591 92 14 2 chr5 8637681 8639242 -194446290 + THE1B-int LTR MaLR 1 1580 0 2358 112 27 33 chr5 8639242 8639608 -194445924 + THE1B LTR MaLR 1 364 0 180 200 0 0 chr5 8640092 8640132 -194445400 + (TAG)n Simple_repeat Simple_repeat 3 42 0 225 224 20 0 chr5 8640509 8640558 -194444974 + (CATATA)n Simple_repeat Simple_repeat 4 53 0 23 54 0 0 chr5 8640819 8640856 -194444676 + AT_rich Low_complexity Low_complexity 1 37 0 333 235 43 17 chr5 8640962 8641077 -194444455 - MER97b DNA MER1_type? 0 1053 936 6955 194 30 9 chr5 8641249 8643378 -194442154 + L1M3f LINE L1 5 2180 -4065 823 209 0 0 chr5 8643423 8643614 -194441918 + L1M3f LINE L1 2917 3107 -3221 * 1617 206 0 8 chr5 8643612 8643985 -194441547 + L1MA4 LINE L1 5902 6271 -29 21 0 0 0 chr5 8643994 8644015 -194441517 + AT_rich Low_complexity Low_complexity 1 21 0 637 213 94 35 chr5 8645180 8645382 -194440150 - MER97a DNA MER1_type? -307 587 374 1970 228 2 4 chr5 8645382 8645848 -194439684 + L1MC3 LINE L1 5523 5987 -1798 375 250 17 17 chr5 8645845 8645965 -194439567 + L1MC3 LINE L1 6739 6858 -927 * 1550 205 92 49 chr5 8646179 8646402 -194439130 + L1MD3 LINE L1 6874 7086 -909 412 194 0 0 chr5 8646402 8646469 -194439063 + MLT1F1 LTR MaLR 45 111 -456 1550 205 92 49 chr5 8646469 8646885 -194438647 + L1MD3 LINE L1 7086 7822 -173 1543 193 84 11 chr5 8646893 8647272 -194438260 + MER50 LTR ERV1 328 734 0 536 269 105 45 chr5 8647290 8647442 -194438090 + L2 LINE L2 2762 2903 -410 3231 136 73 25 chr5 8647442 8648045 -194437487 + MER41B LTR ERV1 3 634 -1 536 269 105 45 chr5 8648045 8648330 -194437202 + L2 LINE L2 2903 3240 -73 23 0 0 0 chr5 8649228 8649251 -194436281 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr5 8649699 8649720 -194435812 + AT_rich Low_complexity Low_complexity 1 21 0 306 163 70 35 chr5 8651391 8651477 -194434055 - MIR SINE MIR -2 260 172 314 340 41 46 chr5 8651488 8651612 -194433920 + L2 LINE L2 3075 3199 -73 2005 153 95 5 chr5 8651612 8652003 -194433529 + MSTB LTR MaLR 1 426 0 314 340 41 46 chr5 8652003 8652072 -194433460 + L2 LINE L2 3199 3267 -5 278 232 254 17 chr5 8652219 8652396 -194433136 + L2 LINE L2 1934 2152 -1162 324 309 49 29 chr5 8652717 8652921 -194432611 - MER112 DNA MER1_type 0 260 53 28 0 0 0 chr5 8654910 8654938 -194430594 + AT_rich Low_complexity Low_complexity 1 28 0 683 283 107 54 chr5 8655982 8656374 -194429158 - L2 LINE L2 -1 3312 2900 183 184 0 0 chr5 8656747 8656785 -194428747 + GA-rich Low_complexity Low_complexity 1 38 0 2487 57 7 0 chr5 8658818 8659115 -194426417 - AluY SINE Alu -10 301 3 207 0 0 0 chr5 8659565 8659588 -194425944 + (A)n Simple_repeat Simple_repeat 1 23 0 24 67 0 0 chr5 8660266 8660311 -194425221 + AT_rich Low_complexity Low_complexity 1 45 0 25 31 0 0 chr5 8661975 8662007 -194423525 + AT_rich Low_complexity Low_complexity 1 32 0 246 292 93 30 chr5 8662602 8662824 -194422708 + L1ME LINE L1 5563 5791 -330 254 87 0 0 chr5 8663048 8663094 -194422438 - LTR66 LTR ERVL -171 439 394 306 216 0 0 chr5 8663094 8663168 -194422364 + (CA)n Simple_repeat Simple_repeat 2 75 0 279 104 0 0 chr5 8663296 8663344 -194422188 + (TA)n Simple_repeat Simple_repeat 2 49 0 27 29 0 0 chr5 8664601 8664635 -194420897 + AT_rich Low_complexity Low_complexity 1 34 0 1042 256 109 6 chr5 8666278 8666590 -194418942 - MER2 DNA MER2_type 0 344 1 1678 153 48 30 chr5 8666689 8666984 -194418548 - AluJb SINE Alu -12 300 1 184 235 153 35 chr5 8666984 8667058 -194418474 + MIR SINE MIR 56 143 -65 303 319 30 0 chr5 8667270 8667436 -194418096 + (CACAA)n Simple_repeat Simple_repeat 4 174 0 460 248 9 0 chr5 8668163 8668268 -194417264 + MER3 DNA MER1_type 98 203 -6 1043 241 101 3 chr5 8668558 8668844 -194416688 + LTR16A LTR ERVL 137 450 0 267 311 74 10 chr5 8668844 8669165 -194416367 + HERV16 LTR ERVL 1 361 -4635 616 310 76 14 chr5 8669348 8669703 -194415829 + HERV16 LTR ERVL 579 955 -4041 712 285 96 17 chr5 8669707 8670116 -194415416 + HERV16 LTR ERVL 1619 2079 -2917 * 1096 347 86 33 chr5 8670110 8671073 -194414459 + HERV16 LTR ERVL 2186 3199 -2565 527 234 0 8 chr5 8671119 8671243 -194414289 + LTR16A LTR ERVL 275 397 -53 845 50 0 0 chr5 8671392 8671492 -194414040 - AluSg/x SINE Alu -7 305 206 945 211 83 5 chr5 8672267 8672471 -194413061 - MER58A DNA MER1_type -3 221 2 22 35 0 0 chr5 8673483 8673512 -194412020 + AT_rich Low_complexity Low_complexity 1 29 0 699 297 29 21 chr5 8674005 8674244 -194411288 - MIR SINE MIR -6 256 16 783 223 217 0 chr5 8675980 8676164 -194409368 + MER58A DNA MER1_type 1 224 0 198 0 0 0 chr5 8676267 8676289 -194409243 + (A)n Simple_repeat Simple_repeat 1 22 0 677 239 17 33 chr5 8676756 8676936 -194408596 + MER5B DNA MER1_type 1 177 -1 188 300 20 15 chr5 8677027 8677122 -194408410 - MER5A DNA MER1_type -65 113 18 213 132 26 0 chr5 8677206 8677244 -194408288 + (CATATA)n Simple_repeat Simple_repeat 2 40 0 210 319 115 18 chr5 8680347 8680460 -194405072 + MIR SINE MIR 41 164 -98 206 305 34 0 chr5 8680929 8680988 -194404544 + L2 LINE L2 3212 3272 0 321 306 106 82 chr5 8681486 8681731 -194403801 + L1M2 LINE L1 882 1132 -5717 461 249 216 16 chr5 8682386 8682571 -194402961 + MIR SINE MIR 18 239 -23 207 0 0 0 chr5 8682654 8682677 -194402855 + (T)n Simple_repeat Simple_repeat 1 23 0 576 317 93 21 chr5 8685707 8686327 -194399205 - L1MC4a LINE L1 -725 5575 5298 30 45 0 0 chr5 8686490 8686534 -194398998 + AT_rich Low_complexity Low_complexity 1 44 0 1054 144 76 79 chr5 8686563 8686728 -194398804 - L1MA8 LINE L1 -6 6285 6140 2243 109 3 3 chr5 8686728 8687040 -194398492 + AluSq SINE Alu 2 313 0 1054 144 76 79 chr5 8687040 8687155 -194398377 - L1MA8 LINE L1 -151 6140 6026 1518 170 4 0 chr5 8687259 8687494 -194398038 - MER46A DNA MER2_type 0 236 1 497 313 55 11 chr5 8688189 8688371 -194397161 + MIR SINE MIR 16 205 -57 1007 132 111 16 chr5 8688417 8688607 -194396925 - MER3 DNA MER1_type -1 208 1 22 35 0 0 chr5 8689443 8689472 -194396060 + AT_rich Low_complexity Low_complexity 1 29 0 28 61 0 0 chr5 8689546 8689595 -194395937 + AT_rich Low_complexity Low_complexity 1 49 0 962 246 89 32 chr5 8689800 8690113 -194395419 - MER93a LTR ERV1 -2 400 70 530 259 7 34 chr5 8691122 8691269 -194394263 - L2 LINE L2 -4 3309 3167 29 0 0 0 chr5 8691606 8691635 -194393897 + AT_rich Low_complexity Low_complexity 1 29 0 267 285 100 12 chr5 8692194 8692380 -194393152 + MIR SINE MIR 2 256 -6 21 36 0 0 chr5 8693656 8693684 -194391848 + AT_rich Low_complexity Low_complexity 1 28 0 183 114 0 0 chr5 8694093 8694128 -194391404 + (A)n Simple_repeat Simple_repeat 1 35 0 1201 246 111 33 chr5 8694540 8694963 -194390569 + LTR65 LTR ERV1 167 622 -47 671 207 133 0 chr5 8695228 8695363 -194390169 + FRAM SINE Alu 5 157 -9 604 258 72 70 chr5 8695412 8695928 -194389604 - L1MC5 LINE L1 -137 7824 7308 1788 86 3 111 chr5 8695944 8696123 -194389409 + MLT2A2 LTR ERVL 173 305 -148 2319 93 75 9 chr5 8696123 8696456 -194389076 + THE1A LTR MaLR 1 355 0 1788 86 3 111 chr5 8696456 8696591 -194388941 + MLT2A2 LTR ERVL 305 453 0 230 257 139 59 chr5 8697187 8697374 -194388158 + LTR16C LTR ERVL 262 463 -28 2443 120 24 24 chr5 8697422 8697796 -194387736 - THE1C LTR MaLR 0 375 2 219 356 110 34 chr5 8698723 8699015 -194386517 + L2 LINE L2 2811 3124 -189 247 293 0 13 chr5 8699026 8699101 -194386431 - L1ME3A LINE L1 -43 6127 6054 345 236 0 0 chr5 8699188 8699260 -194386272 + MER3 DNA MER1_type 43 114 -95 283 165 0 8 chr5 8699264 8699350 -194386182 + MER3 DNA MER1_type 2472 2624 0 238 263 168 0 chr5 8699395 8699490 -194386042 + L2 LINE L2 3180 3290 -23 331 272 218 63 chr5 8700012 8700563 -194384969 - L1M2 LINE L1 -5563 1286 446 1576 232 13 33 chr5 8701684 8701884 -194383648 + MLT1B LTR MaLR 1 191 -199 2638 116 16 8 chr5 8701884 8702256 -194383276 - THE1C LTR MaLR 0 375 1 1576 232 13 33 chr5 8702256 8702452 -194383080 + MLT1B LTR MaLR 191 389 -1 941 221 77 10 chr5 8703227 8703435 -194382097 + MER58A DNA MER1_type 3 224 0 1489 163 16 16 chr5 8703864 8704116 -194381416 + AluSx SINE Alu 36 287 -25 2150 164 3 6 chr5 8704203 8704556 -194380976 + MLT1A1 LTR MaLR 1 352 -13 263 301 206 19 chr5 8704612 8704821 -194380711 + MIR SINE MIR 15 262 0 2114 143 40 27 chr5 8705571 8705941 -194379591 + THE1C LTR MaLR 1 375 0 513 299 64 5 chr5 8706253 8706457 -194379075 + L2 LINE L2 3098 3313 0 766 247 86 0 chr5 8707938 8708112 -194377420 - MER63A DNA MER1_type -4 206 18 509 271 129 78 chr5 8708143 8708516 -194377016 - MLT1J2 LTR MaLR -58 392 1 1834 183 113 26 chr5 8708770 8708882 -194376650 - MLT1C LTR MaLR -7 460 359 6237 90 66 0 chr5 8708882 8709912 -194375620 - L1PA11 LINE L1 -1 6173 5112 1834 183 113 26 chr5 8709912 8710215 -194375317 - MLT1C LTR MaLR -108 359 9 2359 118 30 28 chr5 8711586 8711949 -194373583 + THE1B LTR MaLR 1 364 0 304 258 132 60 chr5 8712618 8712785 -194372747 - L1M4 LINE L1 -1087 5059 4881 196 370 47 24 chr5 8713121 8713248 -194372284 + L2 LINE L2 3133 3262 -10 196 151 19 19 chr5 8713749 8713802 -194371730 + (TA)n Simple_repeat Simple_repeat 1 53 0 1995 222 80 34 chr5 8713897 8714513 -194371019 + LTR48B LTR ERV1 1 644 0 2064 174 11 6 chr5 8714675 8715038 -194370494 + MLT1A1 LTR MaLR 1 365 0 1013 153 0 6 chr5 8715551 8715708 -194369824 + Tigger1 DNA MER2_type 2 157 -2261 * 1242 153 38 0 chr5 8715697 8715906 -194369626 + Tigger1 DNA MER2_type 2202 2418 0 6883 118 46 55 chr5 8715944 8717186 -194368346 - Tigger3b DNA MER2_type 0 1231 1 336 322 0 0 chr5 8717186 8717273 -194368259 + L1MC4 LINE L1 6617 6703 -1339 393 212 11 43 chr5 8717332 8717516 -194368016 + (TATG)n Simple_repeat Simple_repeat 1 178 0 341 314 20 0 chr5 8717518 8717620 -194367912 + (TATATG)n Simple_repeat Simple_repeat 5 108 0 2148 83 52 3 chr5 8718090 8718380 -194367152 + AluSx SINE Alu 1 304 -8 229 371 8 8 chr5 8719703 8719827 -194365705 + MIR SINE MIR 20 143 -119 1857 147 13 7 chr5 8720772 8721078 -194364454 - AluJo SINE Alu -4 308 1 205 283 22 76 chr5 8721491 8721583 -194363949 + MIR SINE MIR 60 146 -116 679 189 16 74 chr5 8721593 8721783 -194363749 - MER5A DNA MER1_type -7 182 4 336 319 17 9 chr5 8722466 8722582 -194362950 - MIR SINE MIR -124 138 22 304 221 85 79 chr5 8724201 8724384 -194361148 + L1ME LINE L1 5550 5745 -419 261 163 0 0 chr5 8728127 8728176 -194357356 + (CA)n Simple_repeat Simple_repeat 1 49 0 228 330 34 0 chr5 8729248 8729336 -194356196 + L2 LINE L2 3181 3271 -42 1943 145 0 3 chr5 8730363 8730667 -194354865 - AluJb SINE Alu -9 303 1 3425 92 11 0 chr5 8731560 8732008 -194353524 + MLT2A2 LTR ERVL 1 453 0 542 125 125 0 chr5 8732214 8732302 -194353230 + AluSq/x SINE Alu 34 132 -180 1444 124 0 0 chr5 8732324 8732533 -194352999 + AluSg/x SINE Alu 102 310 0 1955 139 13 3 chr5 8733024 8733333 -194352199 - AluJb SINE Alu 0 312 1 442 193 9 55 chr5 8733476 8733585 -194351947 + MER104 DNA Tc2 1 104 -76 316 280 99 49 chr5 8734433 8734676 -194350856 + LTR33 LTR ERVL 106 360 -161 2265 157 13 18 chr5 8734680 8735068 -194350464 + MLT1B LTR MaLR 3 388 -2 449 331 43 0 chr5 8735550 8735689 -194349843 + L2 LINE L2 3122 3266 -6 857 198 8 88 chr5 8736334 8736572 -194348960 - MER20 DNA MER1_type 0 219 1 249 333 0 0 chr5 8737576 8737639 -194347893 - L2 LINE L2 -5 3267 3205 597 246 18 53 chr5 8737793 8737950 -194347582 + MIR SINE MIR 1 151 -111 1965 123 0 7 chr5 8737950 8738252 -194347280 - AluSx SINE Alu -12 300 1 597 246 18 53 chr5 8738252 8738314 -194347218 + MIR SINE MIR 151 214 -48 30 69 0 0 chr5 8739270 8739328 -194346204 + AT_rich Low_complexity Low_complexity 1 58 0 2326 73 3 0 chr5 8739357 8739657 -194345875 - AluY SINE Alu -10 301 1 278 292 42 0 chr5 8740069 8740165 -194345367 - Charlie8 DNA MER1_type -2134 283 184 297 366 6 0 chr5 8740259 8740431 -194345101 + (CCAA)n Simple_repeat Simple_repeat 2 174 0 242 322 132 0 chr5 8741766 8741887 -194343645 - MIR SINE MIR -14 248 112 501 274 9 50 chr5 8742207 8742387 -194343145 + MIR SINE MIR 5 182 -51 238 293 102 32 chr5 8742822 8742979 -194342553 - MER5A DNA MER1_type -14 175 8 905 189 13 44 chr5 8743898 8744067 -194341465 - MER96B DNA MER1_type? -8 409 247 1237 231 12 82 chr5 8744067 8744469 -194341063 + MLT1A2 LTR MaLR 1 374 0 905 189 13 44 chr5 8744469 8744526 -194341006 - MER96B DNA MER1_type? -170 247 190 180 0 0 0 chr5 8745400 8745420 -194340112 + (TC)n Simple_repeat Simple_repeat 1 20 0 1686 154 3 20 chr5 8745552 8745844 -194339688 - AluJb SINE Alu -25 287 1 312 27 0 0 chr5 8746803 8746840 -194338692 + (TC)n Simple_repeat Simple_repeat 1 37 0 239 224 60 15 chr5 8746887 8746954 -194338578 + L1MC4 LINE L1 6634 6703 -1339 21 0 0 0 chr5 8746954 8746975 -194338557 + AT_rich Low_complexity Low_complexity 1 21 0 1541 192 0 3 chr5 8746975 8747261 -194338271 - AluJo SINE Alu -27 285 1 2159 105 0 0 chr5 8750202 8750496 -194335036 - AluSg SINE Alu -16 294 1 653 236 61 30 chr5 8750591 8750793 -194334739 - MIR SINE MIR 0 262 50 298 366 6 19 chr5 8751028 8751189 -194334343 + MER5B DNA MER1_type 18 176 -2 2276 61 40 0 chr5 8752011 8752307 -194333225 + AluY SINE Alu 1 308 -3 391 262 58 0 chr5 8753310 8753413 -194332119 - L2 LINE L2 -27 3245 3137 1055 186 29 5 chr5 8754834 8755185 -194330347 + Tigger1 DNA MER2_type 2 2413 -5 208 271 0 0 chr5 8755632 8755680 -194329852 - MIR SINE MIR -21 241 194 1850 142 0 13 chr5 8757429 8757731 -194327801 - AluSg SINE Alu -12 298 1 366 144 0 4 chr5 8757680 8757748 -194327784 - Alu SINE Alu -250 51 2 245 382 45 6 chr5 8758030 8758187 -194327345 - MIR SINE MIR -80 182 20 2252 86 7 23 chr5 8758487 8758791 -194326741 - AluSq SINE Alu -14 299 1 952 201 106 82 chr5 8759632 8760266 -194325266 + MER4C LTR ERV1 10 465 0 2152 128 0 13 chr5 8762401 8762714 -194322818 + AluSx SINE Alu 1 309 -3 376 118 40 0 chr5 8763169 8763245 -194322287 + (TCTA)n Simple_repeat Simple_repeat 3 81 0 498 265 53 52 chr5 8763366 8763624 -194321908 + MLT1D LTR MaLR 5 254 -213 294 323 150 18 chr5 8767397 8767623 -194317909 + MIR SINE MIR 7 262 0 1825 240 33 7 chr5 8769153 8769603 -194315929 - MLT1C LTR MaLR 0 467 6 290 87 22 0 chr5 8769658 8769704 -194315828 + (TC)n Simple_repeat Simple_repeat 1 47 0 289 169 68 0 chr5 8773406 8773465 -194312067 - L2 LINE L2 -1 3312 3250 1995 199 56 79 chr5 8773700 8774267 -194311265 - MLT2B3 LTR ERVL 0 554 1 207 0 0 0 chr5 8774598 8774621 -194310911 + (T)n Simple_repeat Simple_repeat 1 23 0 1440 86 16 67 chr5 8775038 8775126 -194310406 + L1MA1 LINE L1 6054 6145 -157 2133 127 0 0 chr5 8775126 8775417 -194310115 + AluSx SINE Alu 3 293 -19 1440 86 16 67 chr5 8775417 8775434 -194310098 + L1MA1 LINE L1 6145 6161 -141 1919 159 10 3 chr5 8775434 8775558 -194309974 + AluSx SINE Alu 1 123 -189 276 100 0 0 chr5 8775558 8775598 -194309934 + (TATATG)n Simple_repeat Simple_repeat 6 45 0 321 26 0 0 chr5 8775601 8775639 -194309893 + (CA)n Simple_repeat Simple_repeat 1 38 0 1919 159 10 3 chr5 8775639 8775811 -194309721 + AluSx SINE Alu 124 303 -9 1440 86 16 67 chr5 8775811 8775959 -194309573 + L1MA1 LINE L1 6161 6295 -7 23 0 0 0 chr5 8776769 8776792 -194308740 + AT_rich Low_complexity Low_complexity 1 23 0 1079 201 5 33 chr5 8777225 8777439 -194308093 + MER20 DNA MER1_type 6 213 -6 234 280 30 40 chr5 8778632 8778732 -194306800 + MIR SINE MIR 72 170 -92 595 167 118 73 chr5 8779809 8780013 -194305519 + MER5C DNA MER1_type 111 323 -1 333 301 10 10 chr5 8781029 8781132 -194304400 + MIR SINE MIR 110 212 -50 270 270 119 46 chr5 8781196 8781744 -194303788 - L1ME4a LINE L1 -4 6117 5530 2364 96 0 3 chr5 8782764 8783066 -194302466 - AluY SINE Alu -10 301 1 231 152 0 0 chr5 8784837 8784883 -194300649 + CT-rich Low_complexity Low_complexity 1 46 0 181 354 104 11 chr5 8785862 8786122 -194299410 - L3b LINE CR1 -197 1386 1103 1445 217 15 6 chr5 8787087 8787414 -194298118 + L1MB3 LINE L1 5853 6182 -1 2424 45 10 3 chr5 8787423 8787715 -194297817 + AluY SINE Alu 1 294 -17 300 70 0 0 chr5 8787723 8787766 -194297766 + (CAAA)n Simple_repeat Simple_repeat 2 44 0 2306 111 141 5 chr5 8838784 8839161 -194246371 + MSTA LTR MaLR 1 428 0 22 0 0 0 chr5 8840390 8840412 -194245120 + AT_rich Low_complexity Low_complexity 1 22 0 225 154 0 0 chr5 8841476 8841515 -194244017 + (TTCA)n Simple_repeat Simple_repeat 1 39 0 2311 114 0 3 chr5 8842328 8842636 -194242896 + AluSx SINE Alu 1 307 -5 275 254 30 0 chr5 8843413 8843480 -194242052 + LTR16C LTR ERVL 414 482 -9 587 294 95 5 chr5 8847236 8847447 -194238085 + MLT1I LTR MaLR 99 328 -81 458 337 15 10 chr5 8848697 8848902 -194236630 - MIR SINE MIR -6 256 51 668 207 8 139 chr5 8850512 8850763 -194234769 - MER20 DNA MER1_type 0 219 2 401 246 215 26 chr5 8850903 8851098 -194234434 - MLT1J LTR MaLR -279 232 1 239 333 139 19 chr5 8851140 8851608 -194233924 + L2 LINE L2 2364 2887 -427 226 255 53 75 chr5 8851854 8851948 -194233584 + L2 LINE L2 3177 3268 -4 238 302 191 0 chr5 8852046 8852172 -194233360 + MIR3 SINE MIR 36 185 -23 202 143 41 0 chr5 8852321 8852370 -194233162 + (TATATG)n Simple_repeat Simple_repeat 2 52 0 643 251 86 67 chr5 8853056 8853487 -194232045 - MLT1H LTR MaLR -4 545 107 2336 96 0 3 chr5 8853583 8853897 -194231635 - AluSq SINE Alu 0 313 1 2567 61 0 10 chr5 8855698 8856010 -194229522 - AluY SINE Alu -2 309 1 370 289 16 0 chr5 8857248 8857376 -194228156 + MER20 DNA MER1_type 86 215 -4 183 42 0 0 chr5 8857425 8857449 -194228083 + (TTTTG)n Simple_repeat Simple_repeat 1 24 0 1566 164 3 66 chr5 8857449 8857599 -194227933 - AluJb SINE Alu -32 280 157 297 0 0 0 chr5 8857599 8857632 -194227900 + (TA)n Simple_repeat Simple_repeat 1 33 0 1566 164 3 66 chr5 8857632 8857780 -194227752 - AluJb SINE Alu -155 157 1 910 220 33 19 chr5 8857998 8858212 -194227320 - MER58B DNA MER1_type 0 341 125 992 151 0 41 chr5 8858229 8858401 -194227131 + AluJb SINE Alu 129 293 -19 547 213 0 0 chr5 8858402 8858496 -194227036 - MER58B DNA MER1_type -245 96 3 301 252 42 84 chr5 8858888 8859031 -194226501 + MIR3 SINE MIR 21 157 -51 2180 135 37 6 chr5 8859984 8860311 -194225221 + MER1B DNA MER1_type 2 338 -1 500 219 144 31 chr5 8861223 8861383 -194224149 + MER112 DNA MER1_type 81 258 -2 1909 125 133 77 chr5 8862395 8862787 -194222745 - MLT2D LTR ERVL 0 414 1 201 330 70 26 chr5 8864194 8864309 -194221223 + MIR SINE MIR 14 133 -129 2237 64 0 0 chr5 8864333 8864599 -194220933 + AluY SINE Alu 1 266 -45 2639 58 0 0 chr5 8864763 8865072 -194220460 + AluY SINE Alu 1 309 -2 5638 68 36 21 chr5 8865678 8866433 -194219099 - MER4E LTR ERV1 0 766 1 487 247 0 0 chr5 8868810 8868903 -194216629 + MLT1D LTR MaLR 2 94 -411 * 1046 249 179 18 chr5 8868902 8869399 -194216133 + Charlie7 DNA MER1_type 1738 2314 -298 444 219 17 0 chr5 8869400 8869519 -194216013 - L1M4c LINE L1 -3968 2416 2296 283 208 179 1 chr5 8869534 8869766 -194215766 + Charlie7 DNA MER1_type 2320 2604 -8 2379 168 49 35 chr5 8870016 8870468 -194215064 + MLT2C2 LTR ERVL 1 458 -6 549 99 0 0 chr5 8870600 8870681 -194214851 + (TTCC)n Simple_repeat Simple_repeat 3 83 0 1374 229 4 0 chr5 8870684 8870955 -194214577 - L1PA16 LINE L1 0 6166 5895 1446 217 113 29 chr5 8871844 8872226 -194213306 + MLT2D LTR ERVL 1 414 0 877 141 82 0 chr5 8872309 8872444 -194213088 + AluSg/x SINE Alu 140 285 -27 315 0 0 0 chr5 8872461 8872496 -194213036 + (CA)n Simple_repeat Simple_repeat 2 36 0 1865 137 70 23 chr5 8873681 8874024 -194211508 - MER46B DNA MER2_type 0 236 3 2325 109 3 0 chr5 8874542 8874854 -194210678 + AluSq SINE Alu 1 313 0 1920 199 119 19 chr5 8875160 8875632 -194209900 + MLT2B1 LTR ERVL 2 520 0 537 272 380 19 chr5 8876314 8877001 -194208531 + L2 LINE L2 1460 2394 -920 1639 68 5 14 chr5 8877276 8877483 -194208049 - AluY SINE Alu -17 294 90 201 255 0 20 chr5 8877922 8877973 -194207559 + CT-rich Low_complexity Low_complexity 3 52 0 2004 126 0 4 chr5 8878794 8879072 -194206460 + AluSc SINE Alu 1 277 -32 246 62 0 0 chr5 8879072 8879104 -194206428 + (TAAA)n Simple_repeat Simple_repeat 1 32 0 2634 79 18 147 chr5 8879144 8879653 -194205879 + MLT2A1 LTR ERVL 2 444 0 1241 272 139 18 chr5 8880601 8880639 -194204893 - L2 LINE L2 -456 2858 2826 291 71 0 0 chr5 8880639 8880681 -194204851 + (TG)n Simple_repeat Simple_repeat 1 42 0 1241 272 139 18 chr5 8880681 8881323 -194204209 - L2 LINE L2 -488 2826 2095 271 318 12 0 chr5 8882815 8882900 -194202632 - MIR3 SINE MIR -11 197 112 301 231 15 0 chr5 8883590 8883655 -194201877 - MIR SINE MIR -93 169 104 185 164 0 18 chr5 8884528 8884583 -194200949 + (TA)n Simple_repeat Simple_repeat 1 54 0 444 334 50 21 chr5 8884774 8885112 -194200420 - HAL1 LINE L1 -752 1755 1408 424 306 32 19 chr5 8885726 8885883 -194199649 - MIR SINE MIR -87 175 17 25 65 0 0 chr5 8886848 8886894 -194198638 + AT_rich Low_complexity Low_complexity 1 46 0 24 32 0 0 chr5 8886949 8886980 -194198552 + AT_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr5 8887890 8887912 -194197620 + AT_rich Low_complexity Low_complexity 1 22 0 2464 126 36 0 chr5 8887924 8888313 -194197219 - L1PA15-16 LINE L1 -4100 2749 2347 5490 133 16 10 chr5 8888313 8889351 -194196181 + L1PA16 LINE L1 5053 6096 -70 2343 125 46 8 chr5 8891781 8892132 -194193400 - THE1B LTR MaLR 0 364 1 27 49 0 0 chr5 8893160 8893201 -194192331 + AT_rich Low_complexity Low_complexity 1 41 0 1796 106 152 8 chr5 8893481 8893745 -194191787 - AluSx SINE Alu 0 302 1 1710 312 114 23 chr5 8893964 8894263 -194191269 + L2 LINE L2 1742 2012 -1301 4584 190 76 8 chr5 8894263 8895105 -194190427 - MER54A LTR ERVL 0 901 3 1710 312 114 23 chr5 8895105 8896215 -194189317 + L2 LINE L2 2012 3283 -30 2454 71 0 16 chr5 8897477 8897785 -194187747 - AluSx SINE Alu -9 303 1 214 234 168 28 chr5 8899479 8899586 -194185946 + MIR SINE MIR 71 192 -70 1163 215 12 32 chr5 8899593 8899839 -194185693 + MLT1D LTR MaLR 2 242 -263 * 1327 220 19 38 chr5 8899829 8899842 -194185690 + MLT1D LTR MaLR 194 206 -299 1643 159 17 30 chr5 8899842 8900144 -194185388 + AluSx SINE Alu 1 298 -14 1327 220 19 38 chr5 8900144 8900448 -194185084 + MLT1D LTR MaLR 206 505 0 397 213 12 0 chr5 8903067 8903147 -194182385 + L2 LINE L2 3232 3312 -1 2535 137 40 28 chr5 8904050 8904474 -194181058 + MSTB1 LTR MaLR 4 432 0 511 255 156 45 chr5 8904949 8905192 -194180340 + MLT1H LTR MaLR 39 308 -241 406 289 104 66 chr5 8905376 8905829 -194179703 - L1ME4a LINE L1 -1 6120 5651 351 264 82 0 chr5 8905833 8905943 -194179589 - L1ME4a LINE L1 -490 5631 5513 194 291 89 25 chr5 8906839 8906918 -194178614 - MIR3 SINE MIR -15 193 110 202 208 30 79 chr5 8907033 8907134 -194178398 + (TG)n Simple_repeat Simple_repeat 1 96 0 22 0 0 0 chr5 8908645 8908667 -194176865 + AT_rich Low_complexity Low_complexity 1 22 0 183 250 36 18 chr5 8909325 8909381 -194176151 - MIR SINE MIR -110 152 96 280 300 47 33 chr5 8909678 8909828 -194175704 + L3 LINE CR1 1124 1275 -302 839 174 47 0 chr5 8913460 8913603 -194171929 - MLT1B LTR MaLR -23 367 218 870 207 59 104 chr5 8913603 8913972 -194171560 - MLT1A1 LTR MaLR 0 428 10 * 1171 127 31 75 chr5 8913971 8914199 -194171333 - MLT1B LTR MaLR -172 218 1 1750 222 79 35 chr5 8914766 8915274 -194170258 - MER119 DNA MER1_type 0 583 54 28 48 0 0 chr5 8915332 8915374 -194170158 + AT_rich Low_complexity Low_complexity 1 42 0 874 266 89 29 chr5 8915585 8915671 -194169861 - LTR33 LTR ERVL -103 418 339 2429 107 133 13 chr5 8915671 8916053 -194169479 + MSTA LTR MaLR 1 428 0 874 266 89 29 chr5 8916053 8916346 -194169186 - LTR33 LTR ERVL -182 339 16 443 291 53 89 chr5 8917016 8917346 -194168186 + MER21B LTR ERV1 6 326 -279 294 221 57 150 chr5 8917372 8917512 -194168020 + MER21B LTR ERV1 550 676 -187 1105 32 0 0 chr5 8917761 8917887 -194167645 - L1PA5 LINE L1 -1 6153 6028 2287 59 0 53 chr5 8917892 8918196 -194167336 - AluY SINE Alu -23 288 1 449 211 106 33 chr5 8918393 8918573 -194166959 + LTR16A1 LTR ERVL 265 457 0 380 291 162 50 chr5 8920228 8920813 -194164719 + L2 LINE L2 1628 2278 -1036 347 240 24 72 chr5 8921478 8921603 -194163929 - L2 LINE L2 0 3313 3195 659 209 214 15 chr5 8922126 8922322 -194163210 + MER106A DNA MER1_type 2 236 0 1956 145 21 0 chr5 8922342 8922631 -194162901 - AluSx SINE Alu -17 295 1 605 213 25 0 chr5 8924678 8924800 -194160732 - L1ME3A LINE L1 -8 6162 6038 * 13093 17 0 13 chr5 8924799 8927139 -194158393 + L1HS LINE L1 3833 6155 0 246 62 0 0 chr5 8927140 8927172 -194158360 + (A)n Simple_repeat Simple_repeat 1 32 0 318 275 85 17 chr5 8927875 8928116 -194157416 + MLT1L LTR MaLR 248 597 0 1251 235 101 38 chr5 8928688 8929131 -194156401 + MLT1C LTR MaLR 1 466 -1 186 338 127 53 chr5 8930996 8931688 -194153844 + L2 LINE L2 1861 2603 -711 556 258 137 61 chr5 8931946 8932275 -194153257 - MLT1I LTR MaLR -4 405 52 317 351 45 8 chr5 8932406 8932540 -194152992 - MER5A DNA MER1_type -48 141 3 265 211 28 0 chr5 8932877 8932948 -194152584 - L1MA7 LINE L1 -6 6285 6213 1840 153 0 33 chr5 8933153 8933460 -194152072 - AluJb SINE Alu -15 297 1 214 255 20 0 chr5 8934170 8934221 -194151311 + (CAA)n Simple_repeat Simple_repeat 2 53 0 277 224 0 0 chr5 8934237 8934295 -194151237 - MIR SINE MIR -21 241 184 21 57 0 0 chr5 8934867 8934902 -194150630 + AT_rich Low_complexity Low_complexity 1 35 0 1914 178 15 15 chr5 8934974 8935316 -194150216 - MER2 DNA MER2_type -1 343 2 258 240 53 13 chr5 8936264 8936339 -194149193 - L2 LINE L2 -77 3236 3159 684 309 85 32 chr5 8936571 8936946 -194148586 + L2 LINE L2 2447 2841 -473 295 277 70 78 chr5 8937056 8937298 -194148234 + L2 LINE L2 3070 3309 -4 279 274 68 35 chr5 8938954 8939162 -194146370 + L1ME3A LINE L1 5256 5450 -734 241 132 19 19 chr5 8941370 8941423 -194144109 + CT-rich Low_complexity Low_complexity 4 56 0 202 200 25 50 chr5 8941610 8941690 -194143842 + CT-rich Low_complexity Low_complexity 2 79 0 1683 173 62 7 chr5 8942173 8942480 -194143052 + MER58B DNA MER1_type 1 324 -17 1368 113 26 0 chr5 9043038 9043232 -194042300 + THE1B LTR MaLR 133 331 -33 327 191 0 0 chr5 9044164 9044232 -194041300 + (CA)n Simple_repeat Simple_repeat 2 69 0 980 106 0 14 chr5 9044788 9044930 -194040602 - AluSg/x SINE Alu -17 295 156 22 56 0 0 chr5 9045261 9045297 -194040235 + AT_rich Low_complexity Low_complexity 1 36 0 274 361 57 15 chr5 9047731 9047994 -194037538 + L2 LINE L2 2623 2896 -418 340 347 15 10 chr5 9050010 9050209 -194035323 + MIR SINE MIR 63 262 0 2621 65 0 0 chr5 9051771 9052079 -194033453 - AluY SINE Alu -3 308 1 902 260 13 0 chr5 9052084 9052311 -194033221 + L1ME3A LINE L1 5522 5751 -419 810 116 7 87 chr5 9052411 9052549 -194032983 - AluSc SINE Alu -161 148 22 372 310 9 0 chr5 9052646 9052762 -194032770 + L1ME3A LINE L1 6049 6165 -5 642 60 0 0 chr5 9052922 9053005 -194032527 + (TA)n Simple_repeat Simple_repeat 1 83 0 232 244 89 0 chr5 9053174 9053264 -194032268 + L1M4c LINE L1 2382 2479 -3905 667 178 6 57 chr5 9053294 9053451 -194032081 - L1MC3 LINE L1 -875 6910 6762 2627 208 15 4 chr5 9053486 9054021 -194031511 + L1MC3 LINE L1 6994 7534 -251 365 298 67 6 chr5 9054023 9054201 -194031331 + L1MC4a LINE L1 6591 6779 -1029 24 53 0 0 chr5 9054388 9054426 -194031106 + AT_rich Low_complexity Low_complexity 1 38 0 293 308 47 0 chr5 9056334 9056441 -194029091 + L2 LINE L2 3201 3312 -1 219 316 60 8 chr5 9056806 9056932 -194028600 + MIR SINE MIR 11 143 -66 21 0 0 0 chr5 9057560 9057581 -194027951 + AT_rich Low_complexity Low_complexity 1 21 0 443 154 22 0 chr5 9057896 9057987 -194027545 - AluJb SINE Alu 0 312 220 * 720 208 0 0 chr5 9057981 9058101 -194027431 - AluJb SINE Alu -191 121 2 24 0 0 0 chr5 9058115 9058139 -194027393 + AT_rich Low_complexity Low_complexity 1 24 0 1906 149 0 36 chr5 9058169 9058477 -194027055 - AluJb SINE Alu -15 297 1 23 33 0 0 chr5 9059241 9059271 -194026261 + AT_rich Low_complexity Low_complexity 1 30 0 2068 44 52 0 chr5 9060083 9060333 -194025199 - AluY SINE Alu -1 310 48 1538 22 0 16 chr5 9060530 9060715 -194024817 + AluYa5 SINE Alu 120 301 -10 226 237 10 82 chr5 9061084 9061181 -194024351 + MIR SINE MIR 52 141 -121 234 114 45 0 chr5 9061561 9061605 -194023927 - MLT1J2 LTR MaLR -34 416 371 345 318 7 39 chr5 9061795 9061949 -194023583 - MLT1H LTR MaLR -307 242 94 386 256 22 0 chr5 9063733 9063823 -194021709 - MER5A DNA MER1_type -85 104 13 258 336 99 15 chr5 9064364 9064495 -194021037 - L2 LINE L2 -1 3312 3171 28 29 0 0 chr5 9064502 9064537 -194020995 + AT_rich Low_complexity Low_complexity 1 35 0 297 0 0 0 chr5 9064658 9064691 -194020841 + (CA)n Simple_repeat Simple_repeat 2 34 0 321 68 0 0 chr5 9064691 9064735 -194020797 + (GA)n Simple_repeat Simple_repeat 1 44 0 1439 175 61 61 chr5 9066116 9066510 -194019022 + MLT1C LTR MaLR 1 394 -73 309 261 169 72 chr5 9067195 9067444 -194018088 - L2 LINE L2 -11 3302 3030 328 238 61 62 chr5 9067610 9067800 -194017732 + L1MC4a LINE L1 5748 5939 -182 259 320 10 10 chr5 9068076 9068173 -194017359 - MLT1I LTR MaLR -309 100 4 187 336 133 8 chr5 9070317 9070445 -194015087 + L2 LINE L2 3126 3269 -3 2264 200 90 24 chr5 9071137 9071712 -194013820 - L1MB5 LINE L1 -8 6166 5554 21 36 0 0 chr5 9072785 9072813 -194012719 + AT_rich Low_complexity Low_complexity 1 28 0 655 186 9 0 chr5 9073622 9073853 -194011679 - L1MA9 LINE L1 -22 6290 5962 2331 53 0 86 chr5 9074094 9074432 -194011100 + AluY SINE Alu 1 309 -2 1699 271 52 18 chr5 9075706 9076392 -194009140 - L1MC4 LINE L1 -1 8041 7252 1046 225 166 103 chr5 9076393 9076473 -194009059 - L1MC4 LINE L1 -957 7085 7011 2000 124 3 17 chr5 9076473 9076786 -194008746 - AluSx SINE Alu 0 309 1 1046 225 166 103 chr5 9076786 9077135 -194008397 - L1MC4 LINE L1 -1031 7011 6606 192 40 0 0 chr5 9077135 9077160 -194008372 + (TG)n Simple_repeat Simple_repeat 2 26 0 1046 225 166 103 chr5 9077160 9077318 -194008214 - L1MC4 LINE L1 -1436 6606 6459 214 241 0 35 chr5 9077763 9077792 -194007740 + GA-rich Low_complexity Low_complexity 2 30 -27 1680 164 43 0 chr5 9077792 9078097 -194007435 + L1MA4 LINE L1 5983 6300 0 214 241 0 35 chr5 9078097 9078125 -194007407 + GA-rich Low_complexity Low_complexity 30 57 0 200 276 69 52 chr5 9078493 9078551 -194006981 + L2 LINE L2 3148 3206 -66 232 328 47 16 chr5 9080664 9080792 -194004740 + MIR SINE MIR 129 260 -2 967 282 103 3 chr5 9081145 9081532 -194004000 + LTR16A LTR ERVL 25 450 0 230 264 99 33 chr5 9081532 9081623 -194003909 + MIR SINE MIR 81 177 -85 638 199 0 73 chr5 9081896 9082032 -194003500 - FRAM SINE Alu -43 133 8 389 280 143 32 chr5 9082255 9082444 -194003088 + L2 LINE L2 2882 3091 -181 1172 231 46 53 chr5 9082911 9083322 -194002210 - MLT1C LTR MaLR -1 466 59 189 0 0 0 chr5 9084193 9084214 -194001318 + (TTTTTG)n Simple_repeat Simple_repeat 2 22 0 251 238 50 38 chr5 9084422 9084502 -194001030 - MIR SINE MIR 0 262 182 644 143 6 34 chr5 9084513 9084688 -194000844 + (TA)n Simple_repeat Simple_repeat 1 170 0 560 309 133 17 chr5 9084802 9085345 -194000187 - L1M4 LINE L1 -2752 3394 2789 1969 114 0 7 chr5 9086592 9086865 -193998667 - AluSq SINE Alu -8 305 35 182 391 0 17 chr5 9087246 9087361 -193998171 + L3b LINE CR1 1119 1231 -352 678 332 26 142 chr5 9088261 9088487 -193997045 + L1PA7 LINE L1 5867 6066 -88 184 186 0 23 chr5 9089656 9089699 -193995833 + L2 LINE L2 3186 3227 -86 486 319 86 9 chr5 9089814 9090046 -193995486 + MIR SINE MIR 10 259 -3 2377 113 3 0 chr5 9090438 9090749 -193994783 - AluSx SINE Alu 0 312 1 21 0 0 0 chr5 9090939 9090960 -193994572 + AT_rich Low_complexity Low_complexity 1 21 0 567 272 62 5 chr5 9091242 9091437 -193994095 - MER58A DNA MER1_type 0 224 19 2036 75 30 0 chr5 9091618 9091885 -193993647 + L1PA12 LINE L1 5845 6119 -49 203 396 43 40 chr5 9093017 9093391 -193992141 + L3 LINE CR1 403 777 -800 302 280 167 18 chr5 9093585 9093753 -193991779 - MIR SINE MIR -42 220 28 294 239 14 0 chr5 9094034 9094105 -193991427 + MIR3 SINE MIR 128 199 -9 1084 184 34 5 chr5 9094250 9094457 -193991075 - MLT2C1 LTR ERVL -184 213 1 740 239 54 47 chr5 9094458 9094758 -193990774 - ERVL LTR ERVL -2 5755 5380 26 74 0 0 chr5 9094894 9094948 -193990584 + AT_rich Low_complexity Low_complexity 1 54 0 312 73 455 0 chr5 9095165 9095220 -193990312 - MADE1 DNA Mariner 0 80 1 2416 71 0 16 chr5 9095311 9095619 -193989913 + AluY SINE Alu 1 303 -8 1079 231 30 24 chr5 9095807 9096256 -193989276 - MLT1D LTR MaLR -1 504 4 237 116 47 23 chr5 9096257 9096300 -193989232 - MLT1D LTR MaLR -453 52 9 376 290 75 37 chr5 9096597 9096811 -193988721 - MLT1E LTR MaLR -367 226 5 363 318 99 10 chr5 9097907 9098099 -193987433 - MIR SINE MIR -9 253 45 284 315 56 49 chr5 9098415 9098577 -193986955 + L2 LINE L2 2985 3147 -125 229 262 29 10 chr5 9099877 9099980 -193985552 + (TA)n Simple_repeat Simple_repeat 2 106 0 570 256 73 55 chr5 9100721 9101010 -193984522 - MLT1I LTR MaLR -2 407 114 184 318 78 61 chr5 9102439 9102684 -193982848 + L2 LINE L2 2864 3112 -160 228 135 0 0 chr5 9102684 9102721 -193982811 + (TTCC)n Simple_repeat Simple_repeat 3 39 0 284 351 38 0 chr5 9102971 9103102 -193982430 - MIR SINE MIR -71 191 56 299 317 10 0 chr5 9104840 9104944 -193980588 + L1ME2 LINE L1 6038 6142 -22 243 158 0 0 chr5 9106904 9106942 -193978590 - L2 LINE L2 0 3272 3235 273 29 0 0 chr5 9107502 9107536 -193977996 + (CA)n Simple_repeat Simple_repeat 1 34 0 286 204 0 0 chr5 9107599 9107610 -193977922 + MER3 DNA MER1_type 37 47 -162 384 244 57 16 chr5 9107610 9107733 -193977799 - MER3 DNA MER1_type 0 209 82 254 281 21 21 chr5 9107754 9107850 -193977682 - L1MC/D LINE L1 -2031 5777 5682 2039 142 31 0 chr5 9108576 9108900 -193976632 - THE1B LTR MaLR -30 334 1 215 353 147 0 chr5 9109399 9109515 -193976017 - L2 LINE L2 -26 3246 3114 21 36 0 0 chr5 9110977 9111005 -193974527 + AT_rich Low_complexity Low_complexity 1 28 0 260 314 20 20 chr5 9111281 9111434 -193974098 - L1MC/D LINE L1 -443 5678 5526 288 250 0 54 chr5 9111810 9111902 -193973630 - L2 LINE L2 -1361 1953 1867 740 294 167 27 chr5 9111976 9112414 -193973118 - L2 LINE L2 -1462 1852 1354 4481 132 28 74 chr5 9113647 9114482 -193971050 - L1MA4 LINE L1 -8 6292 5497 1282 144 22 51 chr5 9114477 9114831 -193970701 + L1M1 LINE L1 5108 5458 -743 3352 152 39 33 chr5 9114987 9115160 -193970372 + L1MA2 LINE L1 4993 5163 -1142 216 0 0 0 chr5 9115160 9115184 -193970348 + (CA)n Simple_repeat Simple_repeat 1 24 0 3352 152 39 33 chr5 9115184 9115394 -193970138 + L1MA2 LINE L1 5163 5370 -935 2345 90 0 3 chr5 9115394 9115705 -193969827 + AluY SINE Alu 1 310 -1 3352 152 39 33 chr5 9115705 9116181 -193969351 + L1MA2 LINE L1 5370 5858 -447 5734 99 17 1 chr5 9116189 9117060 -193968472 - L1PA13 LINE L1 -1 6162 5278 2480 139 13 13 chr5 9117060 9117511 -193968021 + L1MA2 LINE L1 5853 6304 0 22 35 0 0 chr5 9117959 9117988 -193967544 + AT_rich Low_complexity Low_complexity 1 29 0 413 297 101 9 chr5 9121060 9121279 -193964253 + L2 LINE L2 2301 2539 -775 2174 118 0 0 chr5 9121281 9121577 -193963955 + AluSq SINE Alu 2 297 -16 377 285 50 11 chr5 9122002 9122181 -193963351 + LTR33 LTR ERVL 334 519 -2 1498 266 136 51 chr5 9122774 9123375 -193962157 + L1MCa LINE L1 59 607 -6334 2340 175 24 0 chr5 9123375 9123797 -193961735 + MSTB1 LTR MaLR 1 432 0 1498 266 136 51 chr5 9123797 9125206 -193960326 + L1MCa LINE L1 607 2200 -4741 1422 254 84 28 chr5 9125247 9126280 -193959252 + L1MCa LINE L1 2479 3538 -3403 216 97 0 0 chr5 9126296 9126327 -193959205 + (CA)n Simple_repeat Simple_repeat 2 32 0 296 178 40 53 chr5 9126344 9126496 -193959036 + (TATAA)n Simple_repeat Simple_repeat 5 154 0 180 77 0 0 chr5 9127080 9127106 -193958426 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 352 277 132 76 chr5 9127345 9127846 -193957686 + L1ME4a LINE L1 5593 6121 0 376 262 56 0 chr5 9129739 9129846 -193955686 + MIR SINE MIR 2 114 -148 446 167 0 0 chr5 9129864 9129942 -193955590 - Tigger5 DNA MER2_type 0 2323 2246 335 213 0 27 chr5 9129991 9130066 -193955466 - Tigger5 DNA MER2_type -2231 92 20 651 291 36 4 chr5 9130375 9130626 -193954906 + MIR SINE MIR 3 261 -1 21 0 0 0 chr5 9130651 9130672 -193954860 + AT_rich Low_complexity Low_complexity 1 21 0 350 336 69 42 chr5 9131561 9131749 -193953783 - L2 LINE L2 -763 2551 2353 2077 122 84 29 chr5 9131749 9132092 -193953440 + THE1B LTR MaLR 1 362 -2 350 336 69 42 chr5 9132092 9132165 -193953367 - L2 LINE L2 -961 2353 2283 1134 258 56 12 chr5 9132373 9132783 -193952749 - MLT1H1 LTR MaLR -1 554 134 217 242 91 0 chr5 9132915 9132981 -193952551 + L2 LINE L2 2717 2788 -526 186 43 0 0 chr5 9133312 9133335 -193952197 + (T)n Simple_repeat Simple_repeat 1 23 0 192 323 15 0 chr5 9133475 9133540 -193951992 + MIR3 SINE MIR 101 166 -42 226 303 86 40 chr5 9133661 9133813 -193951719 + L3 LINE CR1 704 862 -715 234 285 102 54 chr5 9135615 9135801 -193949731 + MLT1J LTR MaLR 23 217 -294 954 192 0 0 chr5 9136567 9136718 -193948814 + AluJb SINE Alu 143 293 -19 2352 90 3 0 chr5 9136868 9137178 -193948354 + AluY SINE Alu 1 311 0 676 218 262 17 chr5 9139310 9139719 -193945813 + MLT1H LTR MaLR 39 547 -2 773 225 11 16 chr5 9139830 9140017 -193945515 - MER5A DNA MER1_type -3 186 1 23 54 0 0 chr5 9140794 9140831 -193944701 + AT_rich Low_complexity Low_complexity 1 37 0 47 19 0 0 chr5 9140948 9141002 -193944530 + AT_rich Low_complexity Low_complexity 1 54 0 28 0 0 0 chr5 9141127 9141155 -193944377 + AT_rich Low_complexity Low_complexity 1 28 0 386 165 65 24 chr5 9141157 9141327 -193944205 + (TA)n Simple_repeat Simple_repeat 2 178 0 328 281 87 58 chr5 9141870 9142112 -193943420 + L1ME LINE L1 5537 5785 -336 1285 184 83 0 chr5 9142517 9142792 -193942740 - Tigger1 DNA MER2_type -3 2415 2118 3938 142 14 7 chr5 9142792 9143498 -193942034 + MER50 LTR ERV1 1 711 -23 311 83 0 0 chr5 9143505 9143553 -193941979 - Tigger1 DNA MER2_type -303 2115 2068 5413 146 10 24 chr5 9143553 9144746 -193940786 + L1PB3 LINE L1 4853 6025 -129 2283 109 3 6 chr5 9144746 9145058 -193940474 + AluSx SINE Alu 1 311 -1 5413 146 10 24 chr5 9145058 9145187 -193940345 + L1PB3 LINE L1 6025 6154 0 11694 134 25 21 chr5 9145210 9147279 -193938253 - Tigger1 DNA MER2_type -340 2078 2 5308 81 28 4 chr5 9147730 9148479 -193937053 + L1PA11 LINE L1 5408 6174 0 426 20 0 0 chr5 9150367 9150418 -193935114 + (TATG)n Simple_repeat Simple_repeat 2 52 0 269 111 56 0 chr5 9150421 9150475 -193935057 - FLAM SINE Alu -16 117 61 24 32 0 0 chr5 9150588 9150619 -193934913 + AT_rich Low_complexity Low_complexity 1 31 0 449 299 15 45 chr5 9150724 9151139 -193934393 + L1MC4a LINE L1 3914 4326 -1820 355 318 74 37 chr5 9151229 9151528 -193934004 + L1MC4a LINE L1 4400 4709 -1437 772 265 133 27 chr5 9151827 9152512 -193933020 + L1MC4a LINE L1 5128 5398 -748 2418 55 3 7 chr5 9152536 9152846 -193932686 + AluY SINE Alu 3 311 0 2546 43 40 0 chr5 9153275 9153574 -193931958 - AluY SINE Alu 0 311 1 307 362 50 14 chr5 9153674 9153815 -193931717 + L1MC4a LINE L1 6543 6688 -1120 271 301 41 10 chr5 9153827 9154023 -193931509 + L1MC4 LINE L1 6847 7048 -994 433 286 26 87 chr5 9154490 9154895 -193930637 + L1MC5 LINE L1 7297 7676 -285 1549 213 20 25 chr5 9154895 9155294 -193930238 - MLT2C1 LTR ERVL 0 397 1 433 286 26 87 chr5 9155294 9155315 -193930217 + L1MC5 LINE L1 7676 7697 -264 350 228 13 0 chr5 9155331 9155410 -193930122 - MER63 DNA MER1_type -87 749 44 23 54 0 0 chr5 9155510 9155547 -193929985 + AT_rich Low_complexity Low_complexity 1 37 0 265 296 14 0 chr5 9155967 9156038 -193929494 + MIR SINE MIR 105 176 -86 297 0 0 0 chr5 9157382 9157415 -193928117 + (TG)n Simple_repeat Simple_repeat 2 34 0 2152 124 26 3 chr5 9157427 9157775 -193927757 + THE1B LTR MaLR 9 364 0 354 318 127 5 chr5 9158152 9158341 -193927191 - MIR SINE MIR -14 248 37 349 287 7 60 chr5 9158507 9158657 -193926875 + L2 LINE L2 3118 3259 -54 336 291 112 22 chr5 9159301 9159524 -193926008 - MIR SINE MIR -3 259 17 809 229 71 0 chr5 9160643 9160853 -193924679 + MER82 DNA MER2_type 3 227 -426 380 238 0 0 chr5 9160870 9160950 -193924582 + MER82 DNA MER2_type 573 652 -1 269 272 22 29 chr5 9162591 9162727 -193922805 - L1M4 LINE L1 -348 5830 5696 236 229 0 0 chr5 9163178 9163239 -193922293 - L1M4 LINE L1 -1318 4828 4768 23 0 0 0 chr5 9163609 9163632 -193921900 + AT_rich Low_complexity Low_complexity 1 23 0 570 207 9 0 chr5 9164027 9164170 -193921362 - L1MA10 LINE L1 -35 6299 5996 281 333 8 0 chr5 9164156 9164282 -193921250 - L1ME LINE L1 -644 5591 5465 * 1407 227 120 74 chr5 9164392 9165111 -193920421 - LTR1B LTR ERV1 -74 752 1 2611 237 41 69 chr5 9165112 9166183 -193919349 - L1ME LINE L1 -743 5472 4432 392 287 45 38 chr5 9166211 9166368 -193919164 - L1ME LINE L1 -2221 3994 3837 276 125 0 42 chr5 9166372 9166444 -193919088 + (TA)n Simple_repeat Simple_repeat 1 69 0 1967 296 78 8 chr5 9166491 9167742 -193917790 - L1ME LINE L1 -2400 3815 2460 1220 280 40 23 chr5 9167758 9167905 -193917627 - L1ME LINE L1 -5863 533 390 216 0 0 0 chr5 9167905 9167929 -193917603 + (TC)n Simple_repeat Simple_repeat 2 25 0 1220 280 40 23 chr5 9167929 9168252 -193917280 - L1ME LINE L1 -6006 390 55 731 239 23 11 chr5 9168870 9169046 -193916486 + MER45A DNA AcHobo 1 178 0 1550 197 89 53 chr5 9169166 9169316 -193916216 + MLT1C LTR MaLR 1 144 -323 2463 108 50 14 chr5 9169316 9169678 -193915854 + THE1C LTR MaLR 1 375 0 1550 197 89 53 chr5 9169678 9169978 -193915554 + MLT1C LTR MaLR 144 467 0 1811 190 39 33 chr5 9170309 9170672 -193914860 + MLT1A1 LTR MaLR 1 365 0 638 306 54 0 chr5 9172504 9172690 -193912842 + MIR SINE MIR 34 229 -33 197 365 12 12 chr5 9172761 9172846 -193912686 - L2 LINE L2 0 3313 3229 521 226 17 0 chr5 9172872 9172987 -193912545 - L1PB4 LINE L1 -2 6154 6038 2906 82 8 11 chr5 9173248 9173613 -193911919 - THE1B LTR MaLR 0 364 1 862 156 0 30 chr5 9174608 9174743 -193910789 + FLAM_C SINE Alu 1 131 -2 246 32 0 0 chr5 9174807 9174838 -193910694 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 297 53 0 0 chr5 9175091 9175129 -193910403 - MADE1 DNA Mariner -42 38 1 1588 173 98 57 chr5 9175312 9175751 -193909781 + MLT1C LTR MaLR 2 458 -9 734 189 128 36 chr5 9176721 9176917 -193908615 - MER20 DNA MER1_type -3 216 3 257 266 266 23 chr5 9176925 9177098 -193908434 + MIR SINE MIR 15 229 -33 1093 279 77 68 chr5 9177199 9177732 -193907800 + MER77 LTR ERV1 62 599 -6 2385 98 3 0 chr5 9177997 9178302 -193907230 + AluSg SINE Alu 1 306 -4 203 303 0 0 chr5 9178948 9179014 -193906518 + A-rich Low_complexity Low_complexity 3 68 0 222 295 121 54 chr5 9179072 9179296 -193906236 - L2 LINE L2 -46 3267 3029 231 276 48 35 chr5 9179593 9179738 -193905794 + L1M4 LINE L1 4288 4434 -1712 234 320 91 28 chr5 9180217 9180470 -193905062 - L1M4 LINE L1 -1756 4390 4122 299 333 42 17 chr5 9180666 9180786 -193904746 - MIR3 SINE MIR -21 187 65 903 162 61 18 chr5 9181701 9181929 -193903603 + L1MA7 LINE L1 6032 6269 -22 315 143 26 13 chr5 9181958 9182035 -193903497 + L1MA7 LINE L1 6213 6290 -1 2456 52 3 16 chr5 9183352 9183661 -193901871 + AluY SINE Alu 1 305 -6 392 243 84 99 chr5 9184009 9184211 -193901321 - MIR SINE MIR -44 218 20 2702 17 0 0 chr5 9184858 9185156 -193900376 - AluYa5 SINE Alu -13 298 1 480 207 178 65 chr5 9185333 9185502 -193900030 - ORSL DNA AcHobo -7 268 81 200 227 0 0 chr5 9186577 9186621 -193898911 + T-rich Low_complexity Low_complexity 1 44 0 26 0 0 0 chr5 9186681 9186707 -193898825 + AT_rich Low_complexity Low_complexity 1 26 0 455 328 51 38 chr5 9187065 9187537 -193897995 + L1M4 LINE L1 2434 2911 -3235 180 0 0 0 chr5 9187542 9187562 -193897970 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 4908 81 11 5 chr5 9187567 9188231 -193897301 - L1PA13 LINE L1 -20 6143 5476 2107 116 7 0 chr5 9188282 9188566 -193896966 + AluSx SINE Alu 1 286 -26 747 266 75 50 chr5 9188724 9188780 -193896752 + MLT2E LTR ERVL 43 96 -532 2113 115 3 16 chr5 9188780 9189085 -193896447 + AluSc SINE Alu 1 301 -8 747 266 75 50 chr5 9189085 9189347 -193896185 + MLT2E LTR ERVL 96 369 -259 268 103 0 0 chr5 9189388 9189427 -193896105 + THE1C LTR MaLR 1 39 -389 * 1011 133 40 96 chr5 9189403 9189652 -193895880 + THE1C LTR MaLR 141 375 0 413 232 36 58 chr5 9189735 9189873 -193895659 + ERVL LTR ERVL 3314 3448 -2316 1774 167 3 7 chr5 9190790 9191089 -193894443 + AluJb SINE Alu 1 298 -14 343 275 54 83 chr5 9191191 9191703 -193893829 + MLT1H LTR MaLR 15 549 0 1434 271 125 17 chr5 9191751 9192286 -193893246 + MLT1G1 LTR MaLR 3 595 0 403 293 55 85 chr5 9192286 9192592 -193892940 + MLT1I LTR MaLR 109 405 -4 482 270 182 35 chr5 9192598 9192916 -193892616 + L1M4 LINE L1 3122 3486 -2660 351 0 0 0 chr5 9192973 9193012 -193892520 + (TG)n Simple_repeat Simple_repeat 2 40 0 25 31 0 0 chr5 9193646 9193678 -193891854 + AT_rich Low_complexity Low_complexity 1 32 0 180 111 0 0 chr5 9193807 9193834 -193891698 + (CA)n Simple_repeat Simple_repeat 2 28 0 348 231 0 0 chr5 9195595 9195660 -193889872 + MIR SINE MIR 81 145 -63 671 248 171 5 chr5 9195738 9195960 -193889572 - MIR SINE MIR -3 259 1 183 220 0 0 chr5 9196977 9197027 -193888505 + A-rich Low_complexity Low_complexity 1 50 0 211 333 71 0 chr5 9197072 9197171 -193888361 + L2 LINE L2 3187 3292 -21 180 241 37 56 chr5 9198316 9198370 -193887162 + MIR SINE MIR 71 123 -85 246 315 48 67 chr5 9198655 9198820 -193886712 + L3b LINE CR1 1185 1346 -237 21 0 0 0 chr5 9199233 9199254 -193886278 + AT_rich Low_complexity Low_complexity 1 21 0 252 0 0 0 chr5 9199476 9199504 -193886028 + (A)n Simple_repeat Simple_repeat 1 28 0 32 57 0 0 chr5 9200667 9200720 -193884812 + GC_rich Low_complexity Low_complexity 1 53 0 21 57 0 0 chr5 9201666 9201701 -193883831 + GC_rich Low_complexity Low_complexity 1 35 0 482 259 0 0 chr5 9205144 9205252 -193880280 + MER45A DNA AcHobo 71 178 0 245 346 53 45 chr5 9206787 9206920 -193878612 + MIR3 SINE MIR 49 182 -26 29 0 0 0 chr5 9206999 9207028 -193878504 + AT_rich Low_complexity Low_complexity 1 29 0 408 315 31 8 chr5 9207182 9207309 -193878223 + L2 LINE L2 3184 3313 0 2224 94 3 13 chr5 9207827 9208125 -193877407 + AluSg SINE Alu 1 295 -15 21 89 0 0 chr5 9209817 9209873 -193875659 + AT_rich Low_complexity Low_complexity 1 56 0 1602 181 0 11 chr5 9210509 9210786 -193874746 + AluJb SINE Alu 1 274 -38 2139 129 40 35 chr5 9211775 9212148 -193873384 + THE1C LTR MaLR 1 375 0 268 188 27 20 chr5 9212230 9212379 -193873153 + (TA)n Simple_repeat Simple_repeat 1 150 0 190 106 43 0 chr5 9212437 9212484 -193873048 + (TA)n Simple_repeat Simple_repeat 1 49 0 189 49 24 49 chr5 9212519 9212560 -193872972 + (TTA)n Simple_repeat Simple_repeat 2 41 0 33 0 0 0 chr5 9212665 9212698 -193872834 + AT_rich Low_complexity Low_complexity 1 33 0 415 238 113 61 chr5 9213894 9214125 -193871407 - MLT1L LTR MaLR -365 250 8 21 0 0 0 chr5 9215572 9215593 -193869939 + AT_rich Low_complexity Low_complexity 1 21 0 713 246 108 38 chr5 9215725 9215912 -193869620 + L1ME2 LINE L1 1874 2046 -4675 1858 160 7 0 chr5 9215912 9216212 -193869320 + AluSx SINE Alu 6 307 -5 713 246 108 38 chr5 9216212 9216497 -193869035 + L1ME2 LINE L1 2046 2429 -4292 442 295 80 20 chr5 9216615 9217026 -193868506 + L1ME2 LINE L1 2401 2834 -3706 2053 247 104 15 chr5 9217031 9218085 -193867447 + L1ME2 LINE L1 5373 6518 -40 22 56 0 0 chr5 9218211 9218247 -193867285 + AT_rich Low_complexity Low_complexity 1 36 0 639 237 0 0 chr5 9218430 9218561 -193866971 + FLAM_C SINE Alu 1 131 -12 194 335 57 10 chr5 9221208 9221321 -193864211 + MIR SINE MIR 6 126 -82 230 79 0 26 chr5 9221669 9221707 -193863825 + (GAAA)n Simple_repeat Simple_repeat 3 39 0 2527 43 7 7 chr5 9222576 9222879 -193862653 + AluY SINE Alu 1 303 -8 24 53 0 0 chr5 9222969 9223007 -193862525 + AT_rich Low_complexity Low_complexity 1 38 0 1975 89 63 7 chr5 9224220 9224489 -193861043 - AluSc SINE Alu -25 284 1 273 135 0 0 chr5 9224807 9224859 -193860673 + (TGG)n Simple_repeat Simple_repeat 1 52 0 689 51 31 0 chr5 9224959 9225057 -193860475 - THE1A-int LTR MaLR -1479 101 1 2291 128 14 8 chr5 9225057 9225410 -193860122 - THE1A LTR MaLR 0 355 1 245 155 12 119 chr5 9226137 9226221 -193859311 - L1MB7 LINE L1 -171 6007 5933 235 94 62 62 chr5 9226528 9226592 -193858940 - L1MA9 LINE L1 -10 6302 6239 302 183 0 14 chr5 9226609 9226680 -193858852 - L1MA9 LINE L1 -153 6159 6090 * 314 161 46 146 chr5 9226673 9226839 -193858693 + L1P4 LINE L1 5711 5860 -314 215 247 146 34 chr5 9228033 9228122 -193857410 + MIR SINE MIR 157 255 -7 2157 115 0 7 chr5 9228642 9228963 -193856569 - AluSx SINE Alu 0 319 1 856 278 16 20 chr5 9229039 9229291 -193856241 - MIR SINE MIR 0 262 12 205 220 121 33 chr5 9229818 9229909 -193855623 - MIR SINE MIR -32 230 132 2350 81 0 0 chr5 9230209 9230506 -193855026 + AluY SINE Alu 3 299 -12 1708 219 56 16 chr5 9230597 9231045 -193854487 - MLT1C LTR MaLR -1 466 1 2228 90 11 74 chr5 9231150 9231527 -193854005 - THE1A LTR MaLR 0 355 3 3348 78 36 0 chr5 9231529 9232002 -193853530 - THE1A-int LTR MaLR 0 1580 1091 2647 188 39 26 chr5 9232111 9232730 -193852802 - L1MB8 LINE L1 -211 5967 5329 1947 144 32 32 chr5 9232730 9233105 -193852427 + THE1C LTR MaLR 1 375 0 2647 188 39 26 chr5 9233105 9233138 -193852394 - L1MB8 LINE L1 -849 5329 5298 1071 268 17 0 chr5 9234828 9235119 -193850413 - LTR16A LTR ERVL 0 450 155 189 281 74 44 chr5 9235218 9235333 -193850199 + MIR SINE MIR 63 183 -69 1036 190 156 50 chr5 9235540 9235898 -193849634 + MSTD LTR MaLR 1 396 0 1549 206 125 20 chr5 9235974 9236431 -193849101 - MLT1D LTR MaLR 0 505 1 182 286 0 0 chr5 9236472 9236507 -193849025 + L2 LINE L2 3144 3178 -94 21 0 0 0 chr5 9237079 9237100 -193848432 + AT_rich Low_complexity Low_complexity 1 21 0 1519 233 69 2 chr5 9238002 9238409 -193847123 + MLT2B1 LTR ERVL 31 464 -56 489 143 44 15 chr5 9238410 9238753 -193846779 + (TCTA)n Simple_repeat Simple_repeat 1 353 0 21 0 0 0 chr5 9239542 9239563 -193845969 + AT_rich Low_complexity Low_complexity 1 21 0 15498 129 19 32 chr5 9240311 9243075 -193842457 - Tigger4(Zombi) DNA MER2_type -5 2726 1 22 35 0 0 chr5 9243106 9243135 -193842397 + AT_rich Low_complexity Low_complexity 1 29 0 190 368 11 0 chr5 9244183 9244270 -193841262 + L2 LINE L2 3221 3308 -5 181 362 66 26 chr5 9244977 9245129 -193840403 + L3 LINE CR1 1323 1480 -97 2173 151 89 5 chr5 9245158 9245549 -193839983 - MSTB LTR MaLR 0 426 3 1971 208 27 0 chr5 9246834 9247309 -193838223 - Charlie1 DNA MER1_type -67 2694 2207 1229 246 59 60 chr5 9247492 9247632 -193837900 + L1ME2 LINE L1 4602 4741 -1405 2345 75 0 16 chr5 9247632 9247940 -193837592 - AluY SINE Alu 0 311 9 1229 246 59 60 chr5 9247940 9248544 -193836988 + L1ME2 LINE L1 4741 5345 -801 1604 108 62 22 chr5 9248544 9248885 -193836647 - MER4A LTR ERV1 0 664 252 855 121 0 13 chr5 9248911 9249060 -193836472 - MER4A LTR ERV1 -517 147 1 2754 238 36 13 chr5 9249060 9249855 -193835677 + L1ME2 LINE L1 5342 6155 -9 218 193 35 35 chr5 9251273 9251330 -193834202 + MIR SINE MIR 105 161 -101 424 241 40 125 chr5 9251782 9252134 -193833398 - MLT1K LTR MaLR -116 472 151 980 156 92 29 chr5 9252284 9252522 -193833010 - MLT1D LTR MaLR 0 505 253 890 193 23 6 chr5 9254647 9254818 -193830714 + MER2 DNA MER2_type 1 174 -171 635 183 23 11 chr5 9254862 9255037 -193830495 + CT-rich Low_complexity Low_complexity 3 179 0 280 87 0 0 chr5 9256514 9256560 -193828972 - MER5C DNA MER1_type -46 278 233 372 291 51 17 chr5 9256586 9256703 -193828829 - MER5C DNA MER1_type -200 124 4 2599 193 16 10 chr5 9256807 9256892 -193828640 + L1MC1 LINE L1 4630 4713 -1620 2093 144 0 7 chr5 9256892 9257197 -193828335 + AluSc SINE Alu 1 303 -6 2599 193 16 10 chr5 9257197 9258133 -193827399 + L1MC1 LINE L1 4713 5656 -677 3522 116 10 48 chr5 9258133 9258756 -193826776 + LTR14B LTR ERVK 10 608 0 2123 139 15 22 chr5 9258756 9259160 -193826372 + L1MC1 LINE L1 5657 6057 -276 1380 195 24 7 chr5 9259189 9259476 -193826056 + L1MC1 LINE L1 6036 6327 -6 231 125 0 0 chr5 9260330 9260370 -193825162 + (TC)n Simple_repeat Simple_repeat 1 40 0 1730 185 3 10 chr5 9261105 9261403 -193824129 - AluJb SINE Alu -16 296 1 268 250 9 9 chr5 9261510 9261618 -193823914 + (TATATG)n Simple_repeat Simple_repeat 5 112 0 3021 147 30 63 chr5 9261640 9262273 -193823259 - LTR9 LTR ERV1 0 612 1 4706 205 30 29 chr5 9262411 9262676 -193822856 + L1MD2 LINE L1 4795 5058 -1301 207 0 0 0 chr5 9262676 9262699 -193822833 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 4706 205 30 29 chr5 9262699 9263997 -193821535 + L1MD2 LINE L1 5058 6358 -1 24 0 0 0 chr5 9264527 9264551 -193820981 + AT_rich Low_complexity Low_complexity 1 24 0 800 131 5 5 chr5 9365480 9365668 -193719864 + HSMAR2 DNA Mariner 918 1208 -94 1286 155 14 9 chr5 9365668 9365881 -193719651 + AluJo SINE Alu 75 288 -24 579 115 10 0 chr5 9365888 9365992 -193719540 + HSMAR2 DNA Mariner 1197 1301 -1 343 245 11 0 chr5 9365999 9366093 -193719439 + MIR SINE MIR 168 262 0 264 221 176 0 chr5 9366381 9366449 -193719083 + MIR SINE MIR 68 147 -115 578 270 0 0 chr5 9366496 9366607 -193718925 + FLAM_A SINE Alu 2 112 -30 231 196 33 87 chr5 9366815 9366907 -193718625 - MLT2E LTR ERVL 0 628 583 1206 173 16 8 chr5 9367907 9368150 -193717382 + L1MA8 LINE L1 5813 6057 -234 510 266 56 0 chr5 9370070 9370213 -193715319 - MIR SINE MIR -107 155 5 215 324 88 29 chr5 9370926 9371062 -193714470 + MIR3 SINE MIR 34 177 -31 317 217 58 132 chr5 9371070 9371365 -193714167 - L1MC4 LINE L1 -7 8035 7763 720 40 40 10 chr5 9371394 9371494 -193714038 + MER11A LTR ERVK 1150 1252 -14 1397 276 50 32 chr5 9371494 9372189 -193713343 - L1MC4 LINE L1 -296 7746 7039 597 191 5 79 chr5 9372438 9372577 -193712955 - L1PA4 LINE L1 -429 5876 5753 2178 27 0 0 chr5 9372577 9372834 -193712698 + L1PA4 LINE L1 5895 6151 -4 597 191 5 79 chr5 9372834 9372883 -193712649 - L1MA3 LINE L1 -552 5753 5702 458 222 0 8 chr5 9374368 9374485 -193711047 + (CATATA)n Simple_repeat Simple_repeat 3 118 0 1511 97 4 26 chr5 9374513 9374741 -193710791 - L1PA7 LINE L1 -2 6152 5930 746 175 138 3 chr5 9374878 9375059 -193710473 - MLT1J LTR MaLR -46 459 228 21 0 0 0 chr5 9375895 9375916 -193709616 + AT_rich Low_complexity Low_complexity 1 21 0 40122 39 24 2 chr5 9375939 9381958 -193703574 - L1PA3 LINE L1 0 6155 2 192 158 0 0 chr5 9383246 9383284 -193702248 + A-rich Low_complexity Low_complexity 1 38 0 21 36 0 0 chr5 9383425 9383453 -193702079 + AT_rich Low_complexity Low_complexity 1 28 0 479 323 108 53 chr5 9383976 9384391 -193701141 - L1MC4a LINE L1 -1980 5828 5391 267 206 0 14 chr5 9384410 9384483 -193701049 - L1MC4a LINE L1 -821 5345 5274 2192 121 3 0 chr5 9384755 9385062 -193700470 - AluSq SINE Alu -5 308 1 1082 221 103 29 chr5 9385375 9385723 -193699809 + MLT1A2 LTR MaLR 1 467 0 240 326 20 31 chr5 9385752 9385850 -193699682 + L3b LINE CR1 1328 1424 -159 1770 181 79 65 chr5 9387817 9388242 -193697290 - MER67D LTR ERV1 0 514 79 2242 119 48 20 chr5 9388242 9388596 -193696936 - THE1B LTR MaLR 0 364 1 1770 181 79 65 chr5 9388596 9388677 -193696855 - MER67D LTR ERV1 -435 79 1 833 241 20 24 chr5 9389697 9389950 -193695582 - MLT1J LTR MaLR -259 252 1 342 206 0 72 chr5 9390026 9390123 -193695409 + L1MC4 LINE L1 6614 6703 -1339 229 85 0 43 chr5 9390128 9390175 -193695357 + (TA)n Simple_repeat Simple_repeat 1 45 0 243 0 0 0 chr5 9390175 9390202 -193695330 + (CA)n Simple_repeat Simple_repeat 2 28 0 485 205 26 96 chr5 9390325 9390481 -193695051 - MIR SINE MIR -2 260 116 391 164 273 0 chr5 9391696 9391806 -193693726 - MER67D LTR ERV1 -5 509 370 243 0 0 0 chr5 9391808 9391835 -193693697 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2177 19 8 0 chr5 9391865 9392124 -193693408 - L1PA2 LINE L1 0 6155 5895 287 28 0 0 chr5 9392124 9392160 -193693372 + L1P1 LINE L1 5738 5773 -382 5238 129 32 14 chr5 9392490 9393750 -193691782 + L1PA16 LINE L1 4877 6162 -4 233 263 92 26 chr5 9393853 9393929 -193691603 - MIR SINE MIR -118 144 64 1148 215 64 82 chr5 9393963 9394429 -193691103 + MLT1C LTR MaLR 3 460 -7 286 256 12 12 chr5 9394680 9394762 -193690770 - L1ME3A LINE L1 -258 5912 5831 325 273 56 39 chr5 9394788 9395074 -193690458 - L1ME3A LINE L1 -1445 4701 4411 1059 196 63 72 chr5 9395074 9395421 -193690111 + MER2 DNA MER2_type 1 344 0 615 273 76 52 chr5 9395763 9396019 -193689513 - L1M4 LINE L1 -1465 4681 4433 1078 194 64 67 chr5 9396019 9396364 -193689168 + MER2 DNA MER2_type 1 344 0 615 273 76 52 chr5 9396364 9396984 -193688548 - L1M4 LINE L1 -1713 4433 3784 406 326 0 20 chr5 9397707 9397903 -193687629 + L1ME LINE L1 5512 5703 -418 545 176 104 40 chr5 9397969 9398094 -193687438 - MLT1H LTR MaLR -15 534 402 619 230 158 10 chr5 9398136 9398345 -193687187 - MLT1H LTR MaLR -231 318 79 618 167 0 0 chr5 9398490 9398610 -193686922 + L1MA7 LINE L1 6172 6291 0 185 0 40 0 chr5 9399438 9399463 -193686069 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 1180 152 5 10 chr5 9399469 9399673 -193685859 - MLT1A1 LTR MaLR -162 203 1 796 282 173 19 chr5 9399683 9400006 -193685526 - L2 LINE L2 -784 2530 2158 277 297 40 0 chr5 9400025 9400126 -193685406 + L1M4 LINE L1 4508 4612 -1534 4436 123 3 1 chr5 9400165 9400821 -193684711 + L1PA15 LINE L1 5496 6152 -13 291 191 0 0 chr5 9402672 9402735 -193682797 + (CA)n Simple_repeat Simple_repeat 2 64 0 539 228 127 6 chr5 9402910 9403068 -193682464 + L1PB4 LINE L1 5890 6066 -90 316 212 0 0 chr5 9403096 9403162 -193682370 + L1PB4 LINE L1 5998 6063 -93 321 217 0 0 chr5 9403193 9403262 -193682270 + L1PB4 LINE L1 5998 6066 -90 782 188 19 19 chr5 9403288 9403448 -193682084 + L1PB4 LINE L1 5996 6155 -1 2306 157 14 5 chr5 9403743 9404157 -193681375 + L1MB1 LINE L1 5740 6157 -11 761 64 27 0 chr5 9404159 9404269 -193681263 + (CAATA)n Simple_repeat Simple_repeat 1 113 0 234 0 0 0 chr5 9404398 9404424 -193681108 + (TG)n Simple_repeat Simple_repeat 2 27 0 342 321 132 6 chr5 9404511 9404670 -193680862 - L2 LINE L2 -10 3303 3125 2692 13 0 10 chr5 9405068 9405372 -193680160 + AluYa5 SINE Alu 1 301 -10 1374 199 55 19 chr5 9406243 9406257 -193679275 - MLT1A1 LTR MaLR -12 353 341 2200 172 39 9 chr5 9406257 9406688 -193678844 - L1MC1 LINE L1 -9 6324 5881 1374 199 55 19 chr5 9406688 9406985 -193678547 - MLT1A1 LTR MaLR -24 341 31 1474 114 42 4 chr5 9406997 9407261 -193678271 - L1MC1 LINE L1 -411 5922 5649 199 325 94 26 chr5 9407271 9407388 -193678144 + MIR SINE MIR 132 256 -6 22 0 0 0 chr5 9408483 9408505 -193677027 + AT_rich Low_complexity Low_complexity 1 22 0 1837 72 13 4 chr5 9409245 9409621 -193675911 - L1P3 LINE L1 -671 5483 5105 3544 34 5 5 chr5 9409621 9410057 -193675475 - L1PA4 LINE L1 -1 6154 5719 2737 25 25 0 chr5 9410057 9410423 -193675109 + L1P2 LINE L1 5285 5659 -495 902 77 97 5 chr5 9410525 9410721 -193674811 - L1P LINE L1 -826 5320 5107 3469 32 11 5 chr5 9410722 9411155 -193674377 - L1PA4 LINE L1 -1 6154 5719 3266 29 2 5 chr5 9411155 9411574 -193673958 + L1PA4 LINE L1 5285 5702 -453 2358 83 0 0 chr5 9411576 9411914 -193673618 - L1P LINE L1 -1036 5110 4773 1833 54 50 8 chr5 9411908 9412169 -193673363 + L1P3 LINE L1 5483 5754 -400 * 3453 127 7 39 chr5 9412733 9413276 -193672256 + MER1A DNA MER1_type 2 527 0 23 33 0 0 chr5 9413666 9413696 -193671836 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr5 9413888 9413910 -193671622 + AT_rich Low_complexity Low_complexity 1 22 0 21 82 0 0 chr5 9413987 9414036 -193671496 + AT_rich Low_complexity Low_complexity 1 49 0 729 175 15 0 chr5 9414991 9415128 -193670404 + MLT1F LTR MaLR 404 542 0 194 227 0 107 chr5 9415350 9415425 -193670107 + L2 LINE L2 3247 3313 0 706 216 49 25 chr5 9415566 9415728 -193669804 - FRAM SINE Alu 0 166 1 643 275 5 37 chr5 9415742 9415931 -193669601 - MIR SINE MIR -9 253 71 210 339 169 0 chr5 9415997 9416121 -193669411 + L2 LINE L2 3128 3272 0 622 208 69 25 chr5 9416834 9416993 -193668539 - FRAM SINE Alu 0 166 1 596 289 5 32 chr5 9417009 9417196 -193668336 - MIR SINE MIR -10 252 71 287 331 142 0 chr5 9417263 9417390 -193668142 + L2 LINE L2 3128 3272 0 22 0 0 0 chr5 9418224 9418246 -193667286 + AT_rich Low_complexity Low_complexity 1 22 0 382 280 119 88 chr5 9418317 9418771 -193666761 - HAL1b LINE L1 -661 687 220 245 328 0 0 chr5 9420824 9420891 -193664641 + L2 LINE L2 3187 3253 -60 358 270 6 12 chr5 9423022 9423358 -193662174 + (TG)n Simple_repeat Simple_repeat 1 334 0 466 220 58 62 chr5 9423358 9423545 -193661987 - L1MD2 LINE L1 -89 6077 5959 21 36 0 0 chr5 9424320 9424348 -193661184 + AT_rich Low_complexity Low_complexity 1 28 0 29 0 0 0 chr5 9424544 9424573 -193660959 + AT_rich Low_complexity Low_complexity 1 29 0 502 321 16 25 chr5 9426380 9426597 -193658935 - MIR SINE MIR -31 231 16 374 257 14 42 chr5 9426733 9426877 -193658655 + LTR52 LTR ERVL 11 150 -271 216 292 14 0 chr5 9427618 9427690 -193657842 + L2 LINE L2 2245 2317 -997 379 227 78 31 chr5 9427729 9427857 -193657675 + MLT1J LTR MaLR 51 184 -327 198 179 0 0 chr5 9428106 9428145 -193657387 + L2 LINE L2 2410 2448 -866 236 364 46 31 chr5 9428189 9428384 -193657148 + L2 LINE L2 2575 2772 -542 24 0 0 0 chr5 9428604 9428628 -193656904 + AT_rich Low_complexity Low_complexity 1 24 0 1036 207 49 0 chr5 9428838 9429041 -193656491 + MER58A DNA MER1_type 12 224 0 40 0 0 0 chr5 9429048 9429088 -193656444 + AT_rich Low_complexity Low_complexity 1 40 0 1356 134 0 15 chr5 9429131 9429333 -193656199 + AluSq SINE Alu 103 301 -12 302 286 29 38 chr5 9429556 9429661 -193655871 + L2 LINE L2 2953 3056 -257 188 273 18 0 chr5 9429778 9429833 -193655699 + L2 LINE L2 3227 3282 -31 225 65 0 0 chr5 9429858 9429889 -193655643 + (TGAA)n Simple_repeat Simple_repeat 1 31 0 998 163 0 77 chr5 9431049 9431121 -193654411 + L1PA16 LINE L1 5903 5979 -187 2375 100 0 0 chr5 9431121 9431420 -193654112 + AluSq SINE Alu 1 299 -14 998 163 0 77 chr5 9431420 9431556 -193653976 + L1PA16 LINE L1 5979 6095 -71 5265 168 95 23 chr5 9431567 9432510 -193653022 - LTR28 LTR ERV1 -9 1011 1 305 171 29 0 chr5 9432510 9432580 -193652952 + L1PA16 LINE L1 6095 6166 0 194 287 250 0 chr5 9433319 9433427 -193652105 + L2 LINE L2 3138 3272 0 967 184 162 5 chr5 9433467 9433727 -193651805 - MER51A LTR ERV1 -11 629 334 228 139 0 0 chr5 9433716 9433752 -193651780 - MER51A LTR ERV1 -598 36 1 * 4710 46 0 1 chr5 9434559 9435158 -193650374 - L1P LINE L1 -741 5424 4830 6229 31 19 3 chr5 9435158 9435896 -193649636 + L1PA4 LINE L1 5402 6155 0 406 298 107 28 chr5 9436270 9436589 -193648943 + L2 LINE L2 2921 3264 -49 383 83 33 0 chr5 9437579 9437639 -193647893 - L1MD3 LINE L1 -13 7982 7921 * 578 191 36 0 chr5 9437626 9437736 -193647796 + L1MB5 LINE L1 6024 6137 -37 216 0 0 0 chr5 9438861 9438885 -193646647 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 21 57 0 0 chr5 9439262 9439297 -193646235 + AT_rich Low_complexity Low_complexity 1 35 0 333 0 0 0 chr5 9439748 9439785 -193645747 + (CA)n Simple_repeat Simple_repeat 2 38 0 22 80 0 0 chr5 9442933 9442983 -193642549 + AT_rich Low_complexity Low_complexity 1 50 0 367 195 35 41 chr5 9443029 9443248 -193642284 + (TA)n Simple_repeat Simple_repeat 1 217 0 402 244 111 7 chr5 9443996 9444131 -193641401 - L2 LINE L2 -2 3270 3122 318 26 0 0 chr5 9444499 9444538 -193640994 + (TG)n Simple_repeat Simple_repeat 1 39 0 22 35 0 0 chr5 9444921 9444950 -193640582 + AT_rich Low_complexity Low_complexity 1 29 0 1840 116 81 18 chr5 9445546 9445861 -193639671 - AluSg SINE Alu 0 310 1 383 210 23 0 chr5 9445919 9446095 -193639437 + (TG)n Simple_repeat Simple_repeat 1 180 0 206 322 91 13 chr5 9446853 9446979 -193638553 + MIR SINE MIR 2 133 -75 225 301 0 24 chr5 9448010 9448026 -193637506 + GA-rich Low_complexity Low_complexity 3 18 -65 1528 181 44 17 chr5 9448026 9448324 -193637208 + AluSq SINE Alu 1 306 -7 225 301 0 24 chr5 9448324 9448390 -193637142 + GA-rich Low_complexity Low_complexity 18 83 0 2478 78 5 111 chr5 9450731 9451153 -193634379 + MER51B LTR ERV1 1 377 0 236 310 23 0 chr5 9451179 9451266 -193634266 - MLT1I LTR MaLR -4 405 317 417 302 34 6 chr5 9451430 9451609 -193633923 - MER20 DNA MER1_type 0 219 36 309 344 16 21 chr5 9451764 9451956 -193633576 - L2 LINE L2 -666 2648 2458 223 354 24 24 chr5 9452027 9452154 -193633378 - MER5A DNA MER1_type -25 164 38 302 229 0 0 chr5 9453079 9453140 -193632392 + MLT1I LTR MaLR 348 408 -1 1759 62 0 0 chr5 9454816 9455025 -193630507 + AluY SINE Alu 89 297 -14 2100 138 3 0 chr5 9455149 9455447 -193630085 + AluSx SINE Alu 1 299 -13 2248 137 108 7 chr5 9456098 9456507 -193629025 + LTR7 LTR ERV1 1 450 0 34338 116 10 27 chr5 9456507 9462234 -193623298 + HERVH LTR ERV1 1 5947 -1766 2113 128 67 21 chr5 9462334 9462709 -193622823 - LTR7 LTR ERV1 -58 392 1 2094 82 7 23 chr5 9462709 9463013 -193622519 - HERVH LTR ERV1 0 7713 7415 2811 98 2 62 chr5 9463013 9463463 -193622069 - HERVH LTR ERV1 -134 7579 7157 347 235 49 0 chr5 9463433 9463514 -193622018 - HERVH LTR ERV1 -1670 6043 5959 * 4757 27 0 0 chr5 9463519 9464082 -193621450 - L1PA4 LINE L1 -750 5396 4834 6665 30 3 3 chr5 9464082 9464850 -193620682 + L1PA4 LINE L1 5377 6154 -1 1555 78 46 1 chr5 9464851 9465196 -193620336 + L1P3 LINE L1 5107 5465 -707 225 286 60 24 chr5 9565291 9565375 -193520157 + MIR SINE MIR 145 231 -31 479 214 5 2 chr5 9565677 9566110 -193519422 + (TG)n Simple_repeat Simple_repeat 1 434 0 1996 258 131 35 chr5 9566708 9567679 -193517853 + HAL1 LINE L1 1137 2200 -307 352 364 52 19 chr5 9568015 9568284 -193517248 - L2 LINE L2 -2493 821 544 421 189 56 0 chr5 9569326 9569416 -193516116 + L1MA8 LINE L1 6191 6285 -6 21 0 0 0 chr5 9569417 9569438 -193516094 + AT_rich Low_complexity Low_complexity 1 21 0 333 0 0 0 chr5 9569841 9569878 -193515654 + (TC)n Simple_repeat Simple_repeat 2 38 0 324 0 0 0 chr5 9569880 9569916 -193515616 + (TG)n Simple_repeat Simple_repeat 1 36 0 1859 202 18 27 chr5 9570298 9570374 -193515158 - L1P LINE L1 -2451 3695 3620 3305 79 9 5 chr5 9570374 9570816 -193514716 + MLT2A1 LTR ERVL 1 444 0 1859 202 18 27 chr5 9570816 9571393 -193514139 - L1P LINE L1 -2526 3620 2856 2001 218 75 32 chr5 9571401 9572097 -193513435 - L1M4 LINE L1 -1052 5094 4372 698 201 67 18 chr5 9572851 9573015 -193512517 + LOR1b LTR ERV1 290 461 0 * 1435 155 49 8 chr5 9573015 9573259 -193512273 - MER74A LTR ERVL -304 254 1 846 177 89 58 chr5 9573259 9573519 -193512013 - MLT1E2 LTR MaLR -322 332 71 405 140 18 9 chr5 9573569 9573683 -193511849 + (TA)n Simple_repeat Simple_repeat 1 115 0 1644 148 3 48 chr5 9573721 9574011 -193511521 + AluSx SINE Alu 31 307 -5 262 314 38 0 chr5 9574266 9574371 -193511161 - L1ME LINE L1 -437 5684 5576 1702 192 35 24 chr5 9575193 9575532 -193510000 + MER61A LTR ERV1 1 343 0 1492 163 67 15 chr5 9576594 9576766 -193508766 - L1MA10 LINE L1 -1 6333 6171 402 108 0 0 chr5 9576766 9576831 -193508701 + (TTGG)n Simple_repeat Simple_repeat 3 67 0 1492 163 67 15 chr5 9576831 9576989 -193508543 - L1MA10 LINE L1 -163 6171 5986 30 0 0 0 chr5 9576992 9577022 -193508510 + AT_rich Low_complexity Low_complexity 1 30 0 17489 112 8 1 chr5 9577022 9580319 -193505213 - L1PA8 LINE L1 -1 6171 2855 531 316 113 0 chr5 9581552 9581729 -193503803 + MIR SINE MIR 22 218 -44 183 179 269 0 chr5 9581935 9582002 -193503530 + L2 LINE L2 3186 3270 -2 212 208 0 21 chr5 9582584 9582632 -193502900 + CT-rich Low_complexity Low_complexity 4 50 0 247 242 88 22 chr5 9584777 9584868 -193500664 + L1M4c LINE L1 1621 1717 -4667 21 36 0 0 chr5 9585016 9585044 -193500488 + AT_rich Low_complexity Low_complexity 1 28 0 391 220 80 0 chr5 9585381 9585481 -193500051 - LTR16C LTR ERVL -4 487 380 5894 129 33 11 chr5 9586127 9586186 -193499346 + L1PA13 LINE L1 3616 3672 -2491 333 0 0 0 chr5 9586186 9586223 -193499309 + (CA)n Simple_repeat Simple_repeat 2 38 0 5894 129 33 11 chr5 9586223 9588607 -193496925 + L1PA13 LINE L1 3672 6148 -15 742 232 38 64 chr5 9588635 9589616 -193495916 + L1ME1 LINE L1 5083 6043 -123 261 0 0 0 chr5 9589815 9589844 -193495688 + (A)n Simple_repeat Simple_repeat 1 29 0 2569 106 25 11 chr5 9589862 9590221 -193495311 + THE1B LTR MaLR 1 364 0 3861 127 28 55 chr5 9590892 9591570 -193493962 + L1MC1 LINE L1 5674 6333 0 343 194 125 56 chr5 9592371 9592515 -193493017 + L1ME2 LINE L1 5700 5856 -308 969 251 24 0 chr5 9592611 9592822 -193492710 - MIR SINE MIR 0 262 47 884 143 0 19 chr5 9593776 9593930 -193491602 - L1MA5 LINE L1 -6 6294 6144 3775 98 11 4 chr5 9593939 9594480 -193491052 + L1P LINE L1 4186 4730 -1416 29260 34 194 5 chr5 9594583 9598520 -193487012 - L1P LINE L1 -1460 4686 4 488 295 80 68 chr5 9599571 9599984 -193485548 + L2 LINE L2 1629 2046 -1268 1601 190 10 13 chr5 9601415 9601715 -193483817 - AluJo SINE Alu -13 299 1 318 275 92 98 chr5 9601867 9602194 -193483338 + L2 LINE L2 1624 1948 -1366 258 208 44 30 chr5 9603463 9603581 -193481951 - MLT1G1 LTR MaLR 0 582 319 187 194 0 28 chr5 9603925 9603961 -193481571 + MIR SINE MIR 31 65 -197 180 247 24 24 chr5 9604175 9604260 -193481272 - L2 LINE L2 -1619 1695 1611 826 210 28 23 chr5 9604897 9605073 -193480459 - MER45A DNA AcHobo 0 178 2 1669 160 65 0 chr5 9605761 9606036 -193479496 - AluSx SINE Alu -19 293 1 28 48 0 0 chr5 9607373 9607415 -193478117 + AT_rich Low_complexity Low_complexity 1 42 0 1485 163 30 22 chr5 9607415 9607685 -193477847 + THE1C LTR MaLR 1 272 -103 6366 100 16 16 chr5 9607685 9609034 -193476498 + L1PA14 LINE L1 4603 5950 -211 1772 161 14 3 chr5 9609034 9609325 -193476207 + AluSx SINE Alu 1 294 -18 6366 100 16 16 chr5 9609325 9609527 -193476005 + L1PA14 LINE L1 5949 6150 -11 25 0 0 0 chr5 9609568 9609593 -193475939 + AT_rich Low_complexity Low_complexity 1 25 0 345 320 8 16 chr5 9609844 9609972 -193475560 + MIR SINE MIR 116 242 -20 13800 148 11 112 chr5 9610509 9613726 -193471806 - L1P LINE L1 -3242 2904 12 1195 265 40 11 chr5 9615459 9615806 -193469726 - LTR16B LTR ERVL 0 464 108 862 318 75 32 chr5 9615920 9616389 -193469143 + MLT1K LTR MaLR 1 489 -99 235 232 146 0 chr5 9616569 9616651 -193468881 + MLT1K LTR MaLR 495 588 0 1014 266 219 18 chr5 9616835 9617030 -193468502 - LTR50 LTR ERVL -30 765 610 2447 51 17 0 chr5 9617030 9617324 -193468208 + L1PA7 LINE L1 5854 6152 -2 1014 266 219 18 chr5 9617324 9617700 -193467832 - LTR50 LTR ERVL -185 610 79 1371 48 0 12 chr5 9620751 9620961 -193464571 + L1PA5 LINE L1 5988 6195 0 470 283 107 22 chr5 9622410 9622667 -193462865 - MLT1H1 LTR MaLR -76 491 190 725 274 17 6 chr5 9622735 9622914 -193462618 - MLT1H1 LTR MaLR -374 181 1 189 296 91 0 chr5 9623667 9623755 -193461777 + MIR SINE MIR 137 232 -30 253 170 21 0 chr5 9625558 9625605 -193459927 - MER5A DNA MER1_type -61 128 81 8315 16 0 3 chr5 9625708 9627154 -193458378 + L1PA2 LINE L1 4711 6155 0 590 181 123 32 chr5 9627811 9627966 -193457566 - ERVL LTR ERVL -2153 3611 3443 241 300 54 56 chr5 9628694 9628838 -193456694 - MIR SINE MIR -64 144 15 322 301 90 9 chr5 9629101 9629217 -193456315 - MIR SINE MIR -62 146 43 197 277 21 0 chr5 9629791 9629838 -193455694 - L2 LINE L2 0 3272 3225 333 330 30 0 chr5 9629914 9630014 -193455518 + MER5A DNA MER1_type 10 112 -77 2707 140 19 19 chr5 9630397 9630825 -193454707 - MSTA LTR MaLR 0 428 1 1913 126 3 85 chr5 9630825 9631190 -193454342 - MSTA-int LTR MaLR 0 1651 1317 * 3089 154 27 8 chr5 9631188 9631708 -193453824 + MSTA-int LTR MaLR 1122 1651 0 2862 120 31 5 chr5 9631708 9632125 -193453407 + MSTA LTR MaLR 1 428 0 22 0 0 0 chr5 9632409 9632431 -193453101 + AT_rich Low_complexity Low_complexity 1 22 0 313 319 0 0 chr5 9632766 9632857 -193452675 - MIR SINE MIR -77 131 41 729 269 88 70 chr5 9633765 9633971 -193451561 - HAL1 LINE L1 -1383 1124 923 228 35 0 0 chr5 9633971 9634000 -193451532 + (TTG)n Simple_repeat Simple_repeat 2 30 0 729 269 88 70 chr5 9634000 9634356 -193451176 - HAL1 LINE L1 -1584 923 545 713 259 40 0 chr5 9634356 9634557 -193450975 - MER3 DNA MER1_type 0 209 1 729 269 88 70 chr5 9634557 9634688 -193450844 - HAL1 LINE L1 -1962 545 418 322 204 13 112 chr5 9634785 9634937 -193450595 - HAL1 LINE L1 -2271 236 100 662 169 12 0 chr5 9635455 9635615 -193449917 + (TCCA)n Simple_repeat Simple_repeat 1 162 0 265 167 0 0 chr5 9637319 9637361 -193448171 - 5S rRNA rRNA -79 42 1 278 167 0 0 chr5 9637409 9637451 -193448081 - 5S rRNA rRNA -79 42 1 278 167 0 0 chr5 9637554 9637596 -193447936 - 5S rRNA rRNA -79 42 1 971 334 85 27 chr5 9640292 9640930 -193444602 + L2 LINE L2 1378 2052 -1262 526 301 51 20 chr5 9641057 9641253 -193444279 + L2 LINE L2 3112 3313 0 2419 65 0 0 chr5 9641496 9641790 -193443742 + AluY SINE Alu 1 294 -17 1120 240 59 57 chr5 9641816 9642204 -193443328 + MLT1B LTR MaLR 2 390 0 211 109 55 55 chr5 9642335 9642390 -193443142 + (TATTG)n Simple_repeat Simple_repeat 3 57 0 1054 270 77 70 chr5 9642454 9642634 -193442898 - Charlie7 DNA MER1_type -1892 720 543 1465 148 13 4 chr5 9642634 9642863 -193442669 - L1PA13 LINE L1 -19 6144 5914 1054 270 77 70 chr5 9642863 9643396 -193442136 - Charlie7 DNA MER1_type -2069 543 2 231 311 95 0 chr5 9643444 9643518 -193442014 + MER5B DNA MER1_type 92 172 -6 1884 176 9 21 chr5 9643592 9643932 -193441600 + MLT2C1 LTR ERVL 1 336 -61 198 0 0 0 chr5 9643937 9643959 -193441573 + (CA)n Simple_repeat Simple_repeat 2 23 0 198 0 0 0 chr5 9643959 9643981 -193441551 + (TG)n Simple_repeat Simple_repeat 2 23 0 1579 196 32 0 chr5 9644023 9644303 -193441229 + AluJb SINE Alu 1 289 -23 501 122 20 10 chr5 9644366 9644464 -193441068 + GA-rich Low_complexity Low_complexity 3 101 0 280 366 49 42 chr5 9644558 9644700 -193440832 + L2 LINE L2 3127 3269 -3 7166 71 6 3 chr5 9644818 9646004 -193439528 + L1PA8 LINE L1 4972 6166 -6 1873 185 26 4 chr5 9646011 9646381 -193439151 - L1MA5 LINE L1 -153 6147 5777 250 268 0 0 chr5 9646334 9646390 -193439142 + L1M2 LINE L1 5668 5723 -577 * 279 294 56 37 chr5 9646601 9646798 -193438734 - L1ME LINE L1 -480 5690 5487 226 318 71 18 chr5 9648057 9648227 -193437305 - HAL1 LINE L1 -938 1569 1391 5913 168 15 26 chr5 9648352 9650506 -193435026 - L1PB1 LINE L1 -3 6148 4028 21 36 0 0 chr5 9650842 9650870 -193434662 + AT_rich Low_complexity Low_complexity 1 28 0 252 0 0 0 chr5 9653036 9653064 -193432468 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 398 286 54 58 chr5 9654279 9654520 -193431012 + MIR SINE MIR 23 262 0 265 281 31 70 chr5 9654755 9654883 -193430649 + MER94 DNA DNA 9 131 -3 185 361 114 32 chr5 9655184 9655342 -193430190 + L2 LINE L2 3101 3271 -1 1675 226 20 6 chr5 9657348 9657698 -193427834 - MER4D LTR ERV1 0 903 549 728 152 23 0 chr5 9657728 9657860 -193427672 - MER49 LTR ERV1 -638 285 151 * 1232 176 23 38 chr5 9657859 9658096 -193427436 - MER49 LTR ERV1 -666 257 23 2011 154 0 0 chr5 9658096 9658401 -193427131 - AluSx SINE Alu -7 305 1 1232 176 23 38 chr5 9658401 9658424 -193427108 - MER49 LTR ERV1 -900 23 1 235 231 0 0 chr5 9658683 9658735 -193426797 + A-rich Low_complexity Low_complexity 4 55 0 2055 144 0 3 chr5 9660236 9660535 -193424997 - AluSx SINE Alu -14 298 1 314 249 61 95 chr5 9660570 9660833 -193424699 + MIR SINE MIR 5 262 0 1915 142 45 10 chr5 9662412 9662701 -193422831 + AluSx SINE Alu 1 299 -13 500 317 61 15 chr5 9663638 9663900 -193421632 + MLT2E LTR ERVL 31 304 -324 195 42 0 0 chr5 9664344 9664368 -193421164 + (TG)n Simple_repeat Simple_repeat 1 24 0 23 54 0 0 chr5 9665553 9665590 -193419942 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr5 9665616 9665637 -193419895 + AT_rich Low_complexity Low_complexity 1 21 0 254 208 51 45 chr5 9665647 9665825 -193419707 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 24 0 0 0 chr5 9665825 9665849 -193419683 + AT_rich Low_complexity Low_complexity 1 24 0 22 35 0 0 chr5 9666013 9666042 -193419490 + AT_rich Low_complexity Low_complexity 1 29 0 677 198 0 0 chr5 9666781 9666907 -193418625 + L1MB4 LINE L1 6038 6163 -17 2082 106 19 13 chr5 9667369 9667680 -193417852 + L1PA13 LINE L1 5847 6159 -4 388 253 163 30 chr5 9668264 9668430 -193417102 + MIR SINE MIR 17 204 -58 336 294 91 16 chr5 9669926 9670113 -193415419 + L3 LINE CR1 1066 1266 -311 416 302 72 29 chr5 9671169 9671546 -193413986 - L1MEd LINE L1 -3443 3097 2705 424 167 0 0 chr5 9671579 9671651 -193413881 + MER116 DNA Mariner 6 77 -3 292 239 71 16 chr5 9671668 9671829 -193413703 - L1MEd LINE L1 -3959 2581 2480 1073 153 36 31 chr5 9671974 9672170 -193413362 + MER3 DNA MER1_type 13 209 0 304 167 0 0 chr5 9672127 9672175 -193413357 - MER3 DNA MER1_type -119 90 43 * 454 287 115 69 chr5 9672358 9673022 -193412510 - L1MEd LINE L1 -833 2068 1137 186 143 0 0 chr5 9673130 9673165 -193412367 + (T)n Simple_repeat Simple_repeat 1 35 0 22 0 0 0 chr5 9673798 9673820 -193411712 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr5 9674574 9674596 -193410936 + AT_rich Low_complexity Low_complexity 1 22 0 379 270 50 0 chr5 9674833 9674933 -193410599 - MIR3 SINE MIR -4 204 100 254 323 38 70 chr5 9675517 9675703 -193409829 - MIR SINE MIR -37 225 46 297 256 185 31 chr5 9675749 9675944 -193409588 + L2 LINE L2 2828 3052 -220 2108 105 0 3 chr5 9677381 9677675 -193407857 + AluSx SINE Alu 1 293 -19 341 260 77 19 chr5 9678449 9678553 -193406979 + MIR SINE MIR 34 143 -119 207 197 13 26 chr5 9679202 9679278 -193406254 + (TATATG)n Simple_repeat Simple_repeat 3 77 0 461 319 24 0 chr5 9679546 9679715 -193405817 - MER63A DNA MER1_type -37 173 1 2406 219 56 26 chr5 9680363 9681016 -193404516 - L1ME1 LINE L1 -5 6230 5553 1975 123 0 38 chr5 9681016 9681333 -193404199 - AluSx SINE Alu -7 305 1 2406 219 56 26 chr5 9681333 9681372 -193404160 - L1ME1 LINE L1 -682 5553 5517 765 248 50 31 chr5 9681451 9681807 -193403725 - L1ME1 LINE L1 -3766 2480 2108 27 0 0 0 chr5 9682491 9682518 -193403014 + AT_rich Low_complexity Low_complexity 1 27 0 4707 54 7 3 chr5 9682518 9683096 -193402436 - L1PA5 LINE L1 -4 6150 5571 1276 270 101 24 chr5 9683388 9683884 -193401648 - MER90 LTR ERV1 0 614 81 231 105 35 53 chr5 9684462 9684519 -193401013 + A-rich Low_complexity Low_complexity 3 58 0 396 264 31 78 chr5 9685184 9685377 -193400155 + MLT1J2 LTR MaLR 267 450 0 266 198 238 8 chr5 9688093 9688219 -193397313 + LTR33A LTR ERVL 318 472 -51 2112 182 33 12 chr5 9689163 9689587 -193395945 + L1MC1 LINE L1 5899 6331 -2 198 174 0 0 chr5 9689802 9689848 -193395684 + (CA)n Simple_repeat Simple_repeat 1 46 0 916 313 103 53 chr5 9689971 9690708 -193394824 - L1M4 LINE L1 -817 5329 4556 21 0 0 0 chr5 9691315 9691336 -193394196 + AT_rich Low_complexity Low_complexity 1 21 0 1223 232 69 12 chr5 9693635 9693954 -193391578 - MER58B DNA MER1_type -4 337 1 451 313 46 26 chr5 9694202 9694397 -193391135 - MIR SINE MIR 0 262 64 307 227 21 0 chr5 9695395 9695492 -193390040 + (CA)n Simple_repeat Simple_repeat 1 99 0 608 208 17 6 chr5 9695518 9695696 -193389836 + (CA)n Simple_repeat Simple_repeat 1 180 0 238 300 29 0 chr5 9695698 9695768 -193389764 + (CACG)n Simple_repeat Simple_repeat 1 72 0 393 250 17 0 chr5 9695768 9695940 -193389592 + (CA)n Simple_repeat Simple_repeat 1 175 0 190 255 21 0 chr5 9695962 9696056 -193389476 + (CA)n Simple_repeat Simple_repeat 1 96 0 1526 209 65 18 chr5 9696527 9696887 -193388645 + MLT2D LTR ERVL 1 424 -40 291 28 0 0 chr5 9696903 9696939 -193388593 + (TG)n Simple_repeat Simple_repeat 2 37 0 209 108 27 0 chr5 9697179 9697216 -193388316 + (TTGG)n Simple_repeat Simple_repeat 2 39 0 653 274 21 11 chr5 9698963 9699149 -193386383 + MIR SINE MIR 65 252 -10 223 255 0 0 chr5 9699745 9699796 -193385736 + A-rich Low_complexity Low_complexity 2 52 0 1792 174 76 0 chr5 9700327 9700643 -193384889 + MSTB LTR MaLR 87 426 0 392 55 103 7 chr5 9700839 9700984 -193384548 + (TA)n Simple_repeat Simple_repeat 1 159 0 540 248 15 7 chr5 9702540 9702677 -193382855 - LTR41 LTR ERVL -618 155 18 437 276 247 17 chr5 9702718 9703062 -193382470 - L2 LINE L2 -71 3242 2820 513 349 0 0 chr5 9703070 9703245 -193382287 + (TG)n Simple_repeat Simple_repeat 1 175 0 972 260 72 16 chr5 9703462 9703766 -193381766 - L2 LINE L2 -512 2802 2482 290 127 18 0 chr5 9705993 9706048 -193379484 - MSTB1 LTR MaLR 0 432 377 339 284 0 23 chr5 9706051 9706139 -193379393 + L1MC4 LINE L1 6614 6699 -1343 1842 182 73 0 chr5 9706139 9706480 -193379052 - MSTB1 LTR MaLR -65 367 2 791 103 0 0 chr5 9706642 9706749 -193378783 + AluSg/x SINE Alu 188 294 -15 620 240 62 5 chr5 9707308 9707500 -193378032 - L1MD3 LINE L1 0 7995 7793 228 149 0 43 chr5 9707526 9707573 -193377959 + MLT1L LTR MaLR 567 611 -4 392 178 122 11 chr5 9708741 9708831 -193376701 - MLT1J LTR MaLR 0 511 412 593 270 22 22 chr5 9709023 9709201 -193376331 - MLT1J LTR MaLR -330 181 4 1138 247 160 15 chr5 9709281 9709682 -193375850 - LTR40b LTR ERVL 0 462 4 761 107 0 8 chr5 9711170 9711292 -193374240 - AluY SINE Alu -13 298 178 464 68 0 0 chr5 9711292 9711351 -193374181 - AluY SINE Alu -50 251 193 2042 28 47 0 chr5 9711351 9711605 -193373927 - AluY SINE Alu -44 267 2 1106 260 27 31 chr5 9711782 9711973 -193373559 + L1M4 LINE L1 2128 2318 -3828 330 67 0 0 chr5 9711973 9712018 -193373514 + (TA)n Simple_repeat Simple_repeat 2 46 0 1488 194 3 3 chr5 9712018 9712311 -193373221 - AluJb SINE Alu -3 309 17 1106 260 27 31 chr5 9712311 9712740 -193372792 + L1M4 LINE L1 2316 2792 -3354 189 154 0 0 chr5 9712955 9712994 -193372538 + (CGA)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr5 9713002 9713030 -193372502 + GC_rich Low_complexity Low_complexity 1 28 0 220 194 28 28 chr5 9713040 9713112 -193372420 + (CGGGG)n Simple_repeat Simple_repeat 5 76 0 203 196 36 0 chr5 9713116 9713172 -193372360 + (CCG)n Simple_repeat Simple_repeat 1 58 0 70 24 0 0 chr5 9713308 9713392 -193372140 + GC_rich Low_complexity Low_complexity 1 84 0 249 33 0 0 chr5 9713416 9713446 -193372086 + (CGG)n Simple_repeat Simple_repeat 1 30 0 214 209 7 61 chr5 9713494 9713642 -193371890 + (CGG)n Simple_repeat Simple_repeat 1 140 0 25 51 0 0 chr5 9713677 9713716 -193371816 + GC_rich Low_complexity Low_complexity 1 39 0 198 0 0 0 chr5 9713798 9713820 -193371712 + (CGG)n Simple_repeat Simple_repeat 3 24 0 225 65 0 0 chr5 9713888 9713919 -193371613 + (CGGGGG)n Simple_repeat Simple_repeat 3 33 0 21 57 0 0 chr5 9714161 9714196 -193371336 + GC_rich Low_complexity Low_complexity 1 35 0 924 256 130 38 chr5 9715353 9715628 -193369904 + L2 LINE L2 2418 2666 -606 2553 106 16 5 chr5 9715628 9715996 -193369536 + L1PA10 LINE L1 5795 6166 -2 924 256 130 38 chr5 9715996 9716293 -193369239 + L2 LINE L2 2666 3034 -238 1570 166 53 111 chr5 9716330 9716818 -193368714 - MLT1C LTR MaLR -4 463 4 231 255 128 60 chr5 9716818 9716967 -193368565 + L2 LINE L2 3152 3310 -3 230 116 0 0 chr5 9717220 9717263 -193368269 + LTR66 LTR ERVL 397 439 -171 1910 142 0 0 chr5 9717300 9717582 -193367950 - AluSx SINE Alu -30 282 1 316 326 67 17 chr5 9717801 9717979 -193367553 + MER5A DNA MER1_type 2 188 -1 1063 220 160 60 chr5 9718043 9718512 -193367020 - MLT1H LTR MaLR -8 541 26 740 223 40 55 chr5 9718511 9718713 -193366819 - MLT1C LTR MaLR -216 251 53 * 338 277 149 76 chr5 9718787 9719116 -193366416 - MLT1J LTR MaLR -50 461 109 348 163 168 0 chr5 9719314 9719394 -193366138 - MLT1C LTR MaLR -295 95 8 388 247 0 0 chr5 9719511 9719592 -193365940 + MER20 DNA MER1_type 5 85 -134 1256 245 29 56 chr5 9720163 9720620 -193364912 - MLT1J2 LTR MaLR -14 429 1 410 260 39 10 chr5 9721344 9721448 -193364084 + MIR SINE MIR 17 123 -139 246 301 173 39 chr5 9722025 9722587 -193362945 - L2 LINE L2 -551 2763 2127 2217 95 3 13 chr5 9723670 9723995 -193361537 - AluSx SINE Alu 0 322 1 1126 176 14 23 chr5 9724047 9724268 -193361264 + AluJo SINE Alu 70 288 -24 286 176 24 24 chr5 9724272 9724357 -193361175 + G-rich Low_complexity Low_complexity 3 87 0 256 59 118 0 chr5 9724350 9724401 -193361131 + GA-rich Low_complexity Low_complexity 1 57 0 * 320 262 155 56 chr5 9724567 9724819 -193360713 - MLT1I LTR MaLR -23 386 110 267 340 19 0 chr5 9726120 9726223 -193359309 + L2 LINE L2 3208 3312 -1 1518 158 82 7 chr5 9727131 9727410 -193358122 + AluJb SINE Alu 1 300 -12 1669 170 20 20 chr5 9728499 9728805 -193356727 + AluJo SINE Alu 1 306 -6 5379 177 22 4 chr5 9729260 9730909 -193354623 + L1PB3 LINE L1 4118 5795 -359 192 96 0 58 chr5 9730909 9730961 -193354571 + (TA)n Simple_repeat Simple_repeat 1 49 0 2423 126 8 13 chr5 9730967 9731341 -193354191 + L1PB3 LINE L1 5782 6153 -1 420 300 90 45 chr5 9731370 9731654 -193353878 + L1ME4a LINE L1 5673 5972 -149 344 320 67 44 chr5 9731836 9732493 -193353039 - L1M4 LINE L1 -1711 4435 3764 1168 257 42 38 chr5 9732771 9733080 -193352452 + L1MEc LINE L1 2120 2426 -3789 330 67 0 0 chr5 9733080 9733125 -193352407 + (TA)n Simple_repeat Simple_repeat 1 45 0 1657 165 3 3 chr5 9733125 9733416 -193352116 - AluJb SINE Alu -3 309 19 1168 257 42 38 chr5 9733416 9734024 -193351508 + L1MEc LINE L1 2426 3030 -3185 2193 124 52 22 chr5 9734024 9734388 -193351144 + THE1C LTR MaLR 1 375 0 1168 257 42 38 chr5 9734388 9734525 -193351007 + L1MEc LINE L1 3030 3183 -3032 2003 126 0 10 chr5 9734525 9734835 -193350697 + AluSg SINE Alu 1 307 -3 1168 257 42 38 chr5 9734835 9734891 -193350641 + L1MEc LINE L1 3183 3237 -2978 735 184 184 14 chr5 9735596 9735808 -193349724 - MER47A DNA MER2_type 0 366 119 540 230 79 0 chr5 9735808 9735960 -193349572 - L1MA4 LINE L1 -53 6247 6084 2159 134 119 0 chr5 9735963 9736350 -193349182 + L1MA4 LINE L1 5606 6038 -262 689 183 15 8 chr5 9736352 9736483 -193349049 - MER47A DNA MER2_type -211 155 24 1510 159 73 14 chr5 9736577 9736866 -193348666 - AluJo SINE Alu -6 306 1 1991 102 16 26 chr5 9738626 9738930 -193346602 - AluSg SINE Alu -9 301 1 442 249 87 22 chr5 9739174 9739403 -193346129 - MER74B LTR ERVL -152 470 227 2117 168 55 2 chr5 9739404 9739808 -193345724 + MSTB LTR MaLR 2 426 0 1584 232 84 9 chr5 9740315 9740742 -193344790 - MER68 LTR ERV1 0 562 104 291 292 184 0 chr5 9740740 9740908 -193344624 - LTR53 LTR ERVL -318 201 3 * 376 238 166 0 chr5 9741891 9742042 -193343490 + MER91A DNA MER1_type 17 192 -4 204 302 35 86 chr5 9742504 9742620 -193342912 + L2 LINE L2 2969 3078 -194 227 215 15 0 chr5 9742733 9742798 -193342734 + (TG)n Simple_repeat Simple_repeat 2 67 0 201 354 122 0 chr5 9743260 9743342 -193342190 - MIR SINE MIR -22 240 149 1643 210 68 23 chr5 9743642 9744081 -193341451 - MLT1C LTR MaLR -1 466 8 231 329 168 7 chr5 9744566 9744715 -193340817 + MIR SINE MIR 12 184 -78 862 279 14 41 chr5 9744960 9745322 -193340210 - L1M4 LINE L1 -417 5761 5410 517 188 70 48 chr5 9745326 9745500 -193340032 + L1MB7 LINE L1 5942 6143 -31 325 261 105 39 chr5 9745941 9746094 -193339438 - LTR23 LTR ERV1 0 437 275 384 191 56 0 chr5 9746782 9746871 -193338661 - L1M4 LINE L1 -803 5343 5250 2269 87 0 13 chr5 9748540 9748849 -193336683 - AluSc SINE Alu -4 305 1 2105 159 0 38 chr5 9749357 9749484 -193336048 + MLT1A1 LTR MaLR 10 140 -225 2236 99 0 0 chr5 9749484 9749786 -193335746 - AluSc SINE Alu -7 302 1 2105 159 0 38 chr5 9749786 9750028 -193335504 + MLT1A1 LTR MaLR 140 365 0 2025 183 30 34 chr5 9750303 9750768 -193334764 + MLT1C LTR MaLR 3 465 -2 505 172 0 11 chr5 9750841 9750928 -193334604 - AluJo SINE Alu -138 174 89 371 220 26 63 chr5 9751497 9751640 -193333892 - L1P3 LINE L1 -369 5785 5645 831 188 27 80 chr5 9751644 9751868 -193333664 - MER20 DNA MER1_type -7 212 1 1736 146 3 17 chr5 9751894 9752219 -193333313 - AluJo SINE Alu 0 312 1 405 332 144 24 chr5 9752219 9752245 -193333287 - L1ME LINE L1 -525 5639 5617 2058 147 129 5 chr5 9752245 9752626 -193332906 + MSTC LTR MaLR 1 428 0 405 332 144 24 chr5 9752626 9752891 -193332641 - L1ME LINE L1 -547 5617 5313 2033 102 3 11 chr5 9753204 9753529 -193332003 - AluSq SINE Alu 0 323 1 549 305 69 24 chr5 9753945 9754191 -193331341 - L1ME LINE L1 -1587 4559 4303 2128 100 30 0 chr5 9754191 9754492 -193331040 + AluSx SINE Alu 1 310 -2 2301 172 66 48 chr5 9754605 9755106 -193330426 + MLT2B2 LTR ERVL 6 515 0 255 333 30 30 chr5 9755635 9755767 -193329765 - MER5A DNA MER1_type -14 175 44 375 154 47 24 chr5 9756248 9756417 -193329115 + (TG)n Simple_repeat Simple_repeat 2 174 0 204 189 33 56 chr5 9756417 9756507 -193329025 + (TATG)n Simple_repeat Simple_repeat 1 88 0 418 136 45 34 chr5 9756507 9756683 -193328849 + (TG)n Simple_repeat Simple_repeat 2 179 0 1860 153 0 0 chr5 9757610 9757938 -193327594 + AluJb SINE Alu 1 328 0 180 0 0 0 chr5 9757938 9757958 -193327574 + (CA)n Simple_repeat Simple_repeat 1 20 0 493 243 90 7 chr5 9757997 9758141 -193327391 - L1MD2 LINE L1 -10 6349 6194 781 257 61 14 chr5 9758265 9758479 -193327053 + MER58A DNA MER1_type 1 224 0 430 296 58 32 chr5 9758481 9758670 -193326862 - MIR3 SINE MIR -3 205 12 392 220 347 0 chr5 9758965 9759115 -193326417 - Charlie8 DNA MER1_type -2146 271 70 769 189 43 49 chr5 9759507 9759692 -193325840 + MER20 DNA MER1_type 36 219 0 432 193 44 44 chr5 9760666 9760801 -193324731 - L1ME4a LINE L1 -5 6116 5982 695 236 154 5 chr5 9760806 9761001 -193324531 + MER58A DNA MER1_type 1 224 0 258 136 0 0 chr5 9761020 9761064 -193324468 + (TG)n Simple_repeat Simple_repeat 1 44 0 225 319 146 21 chr5 9761823 9761967 -193323565 + L2 LINE L2 1283 1444 -1870 1007 196 50 23 chr5 9762449 9762709 -193322823 - L1MB4 LINE L1 0 6180 5914 2146 154 15 62 chr5 9762777 9763243 -193322289 - MER65A LTR ERV1 -1 444 1 192 346 140 37 chr5 9763608 9763822 -193321710 + MIR SINE MIR 8 243 -19 637 256 12 18 chr5 9764521 9764685 -193320847 - MER5B DNA MER1_type -15 163 1 306 228 43 33 chr5 9764733 9764825 -193320707 + MIR3 SINE MIR 116 208 0 952 254 12 75 chr5 9765007 9765168 -193320364 - L1ME3A LINE L1 -53 6117 5947 2535 105 18 37 chr5 9765168 9765326 -193320206 + THE1C LTR MaLR 1 160 -215 2121 113 0 0 chr5 9765326 9765618 -193319914 - AluSx SINE Alu -18 294 3 2535 105 18 37 chr5 9765618 9765841 -193319691 + THE1C LTR MaLR 160 375 0 952 254 12 75 chr5 9765841 9765910 -193319622 - L1ME3A LINE L1 -223 5947 5912 2448 43 3 13 chr5 9765910 9766213 -193319319 - AluY SINE Alu -11 300 1 952 254 12 75 chr5 9766213 9766315 -193319217 - L1ME3A LINE L1 -258 5912 5805 1576 179 113 24 chr5 9766315 9766650 -193318882 + MLT1A1 LTR MaLR 1 365 0 378 138 90 2 chr5 9766657 9766755 -193318777 - L1ME3A LINE L1 -376 5802 5689 311 323 36 52 chr5 9767799 9768157 -193317375 - L3 LINE CR1 -87 1490 1094 242 225 42 33 chr5 9768175 9768295 -193317237 + (CA)n Simple_repeat Simple_repeat 1 121 0 * 247 235 17 43 chr5 9768215 9768330 -193317202 + (CAATA)n Simple_repeat Simple_repeat 5 116 0 210 185 37 19 chr5 9768339 9768447 -193317085 + (CA)n Simple_repeat Simple_repeat 1 110 0 261 270 15 44 chr5 9768933 9769070 -193316462 - L1ME3A LINE L1 0 6170 6038 738 259 145 55 chr5 9769103 9769832 -193315700 - L1MEc LINE L1 -2171 4044 3250 1963 108 7 27 chr5 9769982 9770277 -193315255 - AluSx SINE Alu -23 289 1 644 264 85 59 chr5 9770302 9770947 -193314585 - L1MEc LINE L1 -4872 1524 863 3525 121 11 15 chr5 9772098 9772627 -193312905 + MER1A DNA MER1_type 1 527 0 507 206 219 43 chr5 9772864 9773097 -193312435 - LOR1b LTR ERV1 -109 352 79 1120 206 66 8 chr5 9773124 9773381 -193312151 + MER74A LTR ERVL 250 521 -37 1351 251 29 0 chr5 9773462 9773769 -193311763 + MLT1E2 LTR MaLR 311 626 0 303 93 0 0 chr5 9773774 9773817 -193311715 + (ATG)n Simple_repeat Simple_repeat 2 44 0 2346 116 29 0 chr5 9775702 9776046 -193309486 + L1PB3 LINE L1 5800 6153 -1 668 276 61 0 chr5 9776260 9776574 -193308958 + L2 LINE L2 2779 3114 -199 209 294 124 62 chr5 9776749 9776926 -193308606 + L2 LINE L2 3112 3299 -14 1181 226 66 84 chr5 9777218 9777712 -193307820 + MLT1J LTR MaLR 1 485 -26 767 188 60 0 chr5 9777712 9777861 -193307671 - MER90 LTR ERV1 0 575 418 227 349 122 4 chr5 9778806 9779061 -193306471 - L2 LINE L2 -160 3112 2828 235 292 0 14 chr5 9779260 9779332 -193306200 + MLT1H LTR MaLR 139 209 -340 * 935 132 0 0 chr5 9779321 9779457 -193306075 + MSTA LTR MaLR 293 428 0 21 0 0 0 chr5 9780169 9780190 -193305342 + AT_rich Low_complexity Low_complexity 1 21 0 1790 214 59 0 chr5 9780790 9781196 -193304336 + L1MD3 LINE L1 7547 7976 -19 2077 112 137 3 chr5 9781459 9781781 -193303751 + MLT2A2 LTR ERVL 1 365 -88 1233 102 10 56 chr5 9781783 9781980 -193303552 + THE1B LTR MaLR 177 364 0 1324 194 164 44 chr5 9782055 9782488 -193303044 + MLT1D LTR MaLR 1 485 -20 1046 263 89 9 chr5 9782960 9783298 -193302234 - MLT1A1 LTR MaLR 0 365 1 490 236 73 55 chr5 9783860 9784080 -193301452 - LTR67 LTR ERVL -266 291 68 257 209 0 0 chr5 9784120 9784163 -193301369 + polypurine Low_complexity Low_complexity 3 45 0 2188 94 0 13 chr5 9784207 9784505 -193301027 - AluSq SINE Alu -19 294 1 29 28 0 0 chr5 9785013 9785049 -193300483 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr5 9785276 9785298 -193300234 + AT_rich Low_complexity Low_complexity 1 22 0 2034 133 3 3 chr5 9785579 9785880 -193299652 + AluSx SINE Alu 1 301 -11 24 32 0 0 chr5 9785918 9785949 -193299583 + AT_rich Low_complexity Low_complexity 1 31 0 3040 181 160 96 chr5 9786001 9786289 -193299243 + L1MC3 LINE L1 6714 6982 -803 225 65 0 0 chr5 9786289 9786320 -193299212 + (TAAA)n Simple_repeat Simple_repeat 3 33 0 3040 181 160 96 chr5 9786320 9786376 -193299156 + L1MC3 LINE L1 6982 7033 -752 281 286 0 0 chr5 9786376 9786453 -193299079 + MLT1F1 LTR MaLR 35 111 -456 3040 181 160 96 chr5 9786453 9787021 -193298511 + L1MC3 LINE L1 7033 7766 -19 381 185 60 7 chr5 9787037 9787188 -193298344 + (TA)n Simple_repeat Simple_repeat 1 159 0 203 188 45 8 chr5 9787199 9787332 -193298200 + (TA)n Simple_repeat Simple_repeat 2 139 0 307 320 137 34 chr5 9787502 9787949 -193297583 + L1M4 LINE L1 3716 4208 -1938 1541 144 26 58 chr5 9788439 9788820 -193296712 - L1PA13 LINE L1 -1 6162 5794 21 57 0 0 chr5 9789283 9789318 -193296214 + AT_rich Low_complexity Low_complexity 1 35 0 18937 100 11 31 chr5 9789336 9792091 -193293441 + Charlie3 DNA MER1_type 1 2700 -10 269 267 6 0 chr5 9792166 9792342 -193293190 + (CA)n Simple_repeat Simple_repeat 1 177 0 439 311 0 16 chr5 9792380 9792563 -193292969 + (CA)n Simple_repeat Simple_repeat 1 180 0 312 281 0 0 chr5 9792599 9792777 -193292755 + (CA)n Simple_repeat Simple_repeat 2 179 0 515 260 0 7 chr5 9794048 9794351 -193291181 + (CA)n Simple_repeat Simple_repeat 1 300 0 1072 244 83 77 chr5 9794666 9795162 -193290370 + MLT1F1 LTR MaLR 68 566 -1 1268 147 7 8 chr5 9795473 9795694 -193289838 - MLT2B3 LTR ERVL -195 219 1 1566 233 37 22 chr5 9795698 9796157 -193289375 - MLT1C LTR MaLR -1 466 1 228 275 65 36 chr5 9798367 9798505 -193287027 + L1MC4a LINE L1 5254 5395 -2413 500 251 212 8 chr5 9798621 9798880 -193286652 + L2 LINE L2 2598 2909 -405 226 182 23 0 chr5 9798883 9798927 -193286605 + MLT1G LTR MaLR 1 45 -550 2002 183 39 9 chr5 9798928 9799305 -193286227 + MLT2D LTR ERVL 1 480 -40 243 0 0 0 chr5 9799319 9799346 -193286186 + (TG)n Simple_repeat Simple_repeat 2 28 0 1287 204 31 40 chr5 9799486 9799836 -193285696 + MLT1G LTR MaLR 161 571 0 615 280 69 55 chr5 9799884 9800263 -193285269 + L2 LINE L2 2926 3309 -4 1126 287 30 38 chr5 9800290 9800816 -193284716 + L1MC4a LINE L1 5407 5928 -1880 1279 229 93 41 chr5 9802117 9802557 -193282975 + MLT1C LTR MaLR 1 463 -4 204 214 89 0 chr5 9802590 9802646 -193282886 + L2 LINE L2 3210 3270 -2 326 330 89 10 chr5 9804327 9804530 -193281002 + MIR SINE MIR 16 234 -28 21 36 0 0 chr5 9804758 9804786 -193280746 + AT_rich Low_complexity Low_complexity 1 28 0 1942 105 66 21 chr5 9805664 9805950 -193279582 - AluSq SINE Alu -13 300 2 1610 173 24 64 chr5 9806171 9806546 -193278986 + MLT1A1 LTR MaLR 1 360 -5 2482 61 3 3 chr5 9806729 9807025 -193278507 + AluY SINE Alu 1 296 -15 1163 232 95 34 chr5 9807333 9807585 -193277947 - MLT1C LTR MaLR 0 467 183 2229 109 0 0 chr5 9807585 9807878 -193277654 - AluSc SINE Alu -16 293 1 1163 232 95 34 chr5 9807878 9808005 -193277527 - MLT1C LTR MaLR -284 183 65 2324 102 50 44 chr5 9808143 9808354 -193277178 - THE1B LTR MaLR 0 364 148 2036 114 4 4 chr5 9808354 9808664 -193276868 + AluSc SINE Alu 1 310 0 2324 102 50 44 chr5 9808664 9808813 -193276719 - THE1B LTR MaLR -216 148 1 310 217 98 22 chr5 9809546 9809638 -193275894 - MLT1D LTR MaLR -356 149 51 230 285 156 38 chr5 9810848 9811034 -193274498 + MIR SINE MIR 31 238 -24 628 201 98 24 chr5 9813127 9813291 -193272241 - MER45A DNA AcHobo 0 178 3 5427 106 24 20 chr5 9813583 9813616 -193271916 + L1PA16 LINE L1 5332 5363 -803 1156 59 0 182 chr5 9813616 9813852 -193271680 + 7SK RNA RNA 1 193 0 5427 106 24 20 chr5 9813852 9814649 -193270883 + L1PA16 LINE L1 5363 6165 -1 2262 100 0 10 chr5 9815340 9815649 -193269883 + AluSg SINE Alu 2 307 -3 316 215 88 73 chr5 9815650 9815855 -193269677 + L1M4 LINE L1 3115 3322 -2824 2652 243 43 28 chr5 9815859 9816817 -193268715 + L1M4 LINE L1 3575 4546 -1600 887 97 0 0 chr5 9816822 9816935 -193268597 - AluSq SINE Alu -48 265 153 607 256 6 0 chr5 9816942 9817098 -193268434 + L1M4 LINE L1 4563 4719 -1427 360 0 0 0 chr5 9817165 9817205 -193268327 + (TG)n Simple_repeat Simple_repeat 1 40 0 868 166 7 0 chr5 9817208 9817347 -193268185 - FLAM_C SINE Alu -3 140 1 25 0 0 0 chr5 9818128 9818153 -193267379 + AT_rich Low_complexity Low_complexity 1 25 0 1797 127 67 0 chr5 9818253 9818520 -193267012 - AluSq SINE Alu -28 285 1 244 215 83 42 chr5 9818863 9819007 -193266525 + L1M4 LINE L1 5189 5338 -808 903 85 0 0 chr5 9819302 9819420 -193266112 - AluY SINE Alu -21 290 173 387 0 0 0 chr5 9819476 9819519 -193266013 + (CA)n Simple_repeat Simple_repeat 2 44 0 2536 186 35 2 chr5 9819538 9820027 -193265505 - MLT1D LTR MaLR 0 505 1 180 0 0 0 chr5 9820102 9820122 -193265410 + (TC)n Simple_repeat Simple_repeat 1 20 0 21 104 0 0 chr5 9820136 9820213 -193265319 + AT_rich Low_complexity Low_complexity 1 77 0 456 294 0 27 chr5 9820328 9820512 -193265020 + (TG)n Simple_repeat Simple_repeat 2 180 0 186 261 0 0 chr5 9822002 9822048 -193263484 + L2 LINE L2 3015 3060 -253 224 156 0 0 chr5 9822754 9822799 -193262733 + L2 LINE L2 3018 3062 -210 1762 71 0 0 chr5 9823337 9823548 -193261984 - AluSg/x SINE Alu -25 287 77 1963 131 103 25 chr5 9823675 9824042 -193261490 + MLT2C1 LTR ERVL 2 397 0 710 141 43 12 chr5 9826106 9826418 -193259114 + (CA)n Simple_repeat Simple_repeat 1 321 0 1487 190 65 50 chr5 9826424 9826808 -193258724 + MLT1B LTR MaLR 1 390 0 1913 289 52 72 chr5 9826817 9827792 -193257740 - ERVL LTR ERVL -2955 2809 1854 398 292 39 8 chr5 9827822 9827952 -193257580 + L2 LINE L2 3138 3271 -1 1280 215 134 6 chr5 9828576 9828911 -193256621 - L1MD3 LINE L1 -13 7982 7605 1386 222 57 40 chr5 9829281 9829651 -193255881 - MLT2B3 LTR ERVL -4 550 175 313 259 65 0 chr5 9829657 9829765 -193255767 - MLT1J2 LTR MaLR -313 137 23 180 240 87 87 chr5 9830642 9830746 -193254786 + L2 LINE L2 2729 2832 -482 614 241 143 52 chr5 9831064 9831424 -193254108 - MLT1J2 LTR MaLR -1 445 41 1180 275 142 53 chr5 9831512 9832133 -193253399 - MER50 LTR ERV1 -58 676 1 257 262 71 24 chr5 9833145 9833229 -193252303 + MER91B DNA MER1_type 44 131 -59 292 321 12 0 chr5 9833242 9833326 -193252206 + MER91B DNA MER1_type 93 177 -13 4237 129 41 124 chr5 9833732 9834776 -193250756 - L1MC2 LINE L1 -11 6333 5377 2067 108 3 0 chr5 9835523 9835830 -193249702 + AluSx SINE Alu 1 312 0 208 358 42 0 chr5 9835974 9836069 -193249463 + L3 LINE CR1 1459 1557 -20 1870 136 3 3 chr5 9836260 9836554 -193248978 - L1PB1 LINE L1 -1 6150 5857 3957 118 21 4 chr5 9836554 9837279 -193248253 + L1PB1 LINE L1 5117 5853 -298 320 309 73 0 chr5 9837443 9837553 -193247979 + L2 LINE L2 3155 3272 0 224 319 43 76 chr5 9840389 9840574 -193244958 + L3 LINE CR1 597 775 -802 30 45 0 0 chr5 9841420 9841464 -193244068 + AT_rich Low_complexity Low_complexity 1 44 0 2311 61 7 3 chr5 9841652 9841946 -193243586 + AluY SINE Alu 1 295 -16 826 235 90 45 chr5 9842720 9843103 -193242429 - MLT1C LTR MaLR -1 466 12 1755 167 0 3 chr5 9843395 9843688 -193241844 + AluJb SINE Alu 1 292 -20 263 250 114 0 chr5 9844136 9844214 -193241318 + MIR3 SINE MIR 110 200 -8 2245 104 0 0 chr5 9844214 9844523 -193241009 - AluSx SINE Alu -3 309 1 239 282 220 22 chr5 9845974 9846247 -193239285 - L2 LINE L2 -342 2972 2646 2222 110 0 0 chr5 9846268 9846578 -193238954 + AluSx SINE Alu 1 310 -2 852 152 0 0 chr5 9846714 9846846 -193238686 - AluSq/x SINE Alu -180 132 1 1695 147 109 32 chr5 9847013 9847361 -193238171 + THE1C LTR MaLR 1 375 0 300 354 31 36 chr5 9848467 9848659 -193236873 - HAL1b LINE L1 -1052 296 106 2478 44 0 0 chr5 9848692 9848987 -193236545 + AluY SINE Alu 1 295 -16 1733 129 42 18 chr5 9848989 9849275 -193236257 - AluJo SINE Alu -19 293 1 431 133 0 0 chr5 9849367 9849427 -193236105 + 5S rRNA rRNA 31 90 -31 2044 135 0 0 chr5 9849759 9850062 -193235470 - AluSx SINE Alu -9 303 1 403 314 128 33 chr5 9851047 9851468 -193234064 - L1MEd LINE L1 -5198 921 461 240 345 73 0 chr5 9851471 9851636 -193233896 - L1MEd LINE L1 -5939 180 4 1696 151 4 0 chr5 9853371 9853636 -193231896 + AluSx SINE Alu 1 266 -46 246 32 0 0 chr5 9853650 9853681 -193231851 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1981 120 7 14 chr5 9853755 9854047 -193231485 + AluSx SINE Alu 2 291 -21 1854 135 10 13 chr5 9855215 9855519 -193230013 - AluJb SINE Alu -9 303 1 1403 187 73 0 chr5 9856440 9856592 -193228940 - AluJo SINE Alu -19 293 154 207 0 0 0 chr5 9856592 9856615 -193228917 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1403 187 73 0 chr5 9856615 9856735 -193228797 - AluJo SINE Alu -158 154 1 407 232 21 0 chr5 9857046 9857141 -193228391 - MIR SINE MIR -98 164 68 849 40 0 151 chr5 9857235 9857533 -193227999 + L1PA3 LINE L1 5891 6143 -12 346 266 65 16 chr5 9857650 9857774 -193227758 - L1 LINE L1 -2945 3201 3072 242 194 28 28 chr5 9857834 9857906 -193227626 + (CCCCG)n Simple_repeat Simple_repeat 5 76 0 21 36 0 0 chr5 9857916 9857944 -193227588 + GC_rich Low_complexity Low_complexity 1 28 0 180 158 0 0 chr5 9857952 9857990 -193227542 + (TCG)n Simple_repeat Simple_repeat 2 39 0 31 0 0 0 chr5 9858053 9858084 -193227448 + GC_rich Low_complexity Low_complexity 1 31 0 31 0 0 0 chr5 9858137 9858168 -193227364 + GC_rich Low_complexity Low_complexity 1 31 0 29 28 0 0 chr5 9858279 9858315 -193227217 + GC_rich Low_complexity Low_complexity 1 36 0 27 29 0 0 chr5 9858362 9858396 -193227136 + GC_rich Low_complexity Low_complexity 1 34 0 23 33 0 0 chr5 9858789 9858819 -193226713 + AT_rich Low_complexity Low_complexity 1 30 0 1423 228 102 28 chr5 9863443 9863966 -193221566 - MLT1E3 LTR MaLR 0 624 18 807 97 0 0 chr5 9864219 9864379 -193221153 + AluSc SINE Alu 168 327 0 198 0 0 0 chr5 9866204 9866226 -193219306 + (T)n Simple_repeat Simple_repeat 1 22 0 957 159 53 0 chr5 9866502 9866672 -193218860 + MER3 DNA MER1_type 1 179 -30 259 326 47 29 chr5 9867046 9867218 -193218314 - MIR SINE MIR -17 245 71 180 286 57 14 chr5 9867738 9867808 -193217724 - MIR SINE MIR -118 144 72 343 296 11 0 chr5 9868552 9868640 -193216892 - MIR SINE MIR -161 101 13 2221 104 0 0 chr5 9868698 9869005 -193216527 + AluY SINE Alu 1 307 -4 262 330 11 11 chr5 9869777 9869871 -193215661 - MIR SINE MIR -4 258 165 196 308 49 56 chr5 9871209 9871352 -193214180 + L2 LINE L2 2921 3062 -251 308 247 12 35 chr5 9871946 9872031 -193213501 - MER117 DNA MER1_type -60 137 55 270 109 18 18 chr5 9872483 9872538 -193212994 - L1ME4a LINE L1 -10 6111 6057 262 276 29 48 chr5 9872855 9872960 -193212572 + MIR SINE MIR 82 184 -78 180 0 0 0 chr5 9874413 9874433 -193211099 + (A)n Simple_repeat Simple_repeat 1 20 0 826 186 12 12 chr5 9875201 9875362 -193210170 - FRAM SINE Alu -5 161 1 196 314 14 43 chr5 9877716 9877786 -193207746 - L2 LINE L2 -10 3303 3236 2243 115 0 16 chr5 9879406 9879719 -193205813 - AluSc SINE Alu -1 308 1 470 281 22 14 chr5 9884484 9884623 -193200909 - MIR SINE MIR -35 227 88 207 250 42 94 chr5 9887138 9887234 -193198298 + MER5A DNA MER1_type 92 182 -7 427 246 108 0 chr5 9889055 9889222 -193196310 + MER3 DNA MER1_type 3 187 -22 207 292 31 62 chr5 9890871 9890967 -193194565 - L2 LINE L2 -1 3271 3179 1506 168 70 16 chr5 9893555 9893924 -193191608 - Charlie5 DNA MER1_type 0 2624 2236 26 50 0 0 chr5 9894522 9894562 -193190970 + AT_rich Low_complexity Low_complexity 1 40 0 2138 145 0 3 chr5 9897914 9898217 -193187315 - AluSx SINE Alu -10 302 1 24 0 0 0 chr5 9900408 9900432 -193185100 + AT_rich Low_complexity Low_complexity 1 24 0 1296 138 0 0 chr5 9900991 9901172 -193184360 + AluSg/x SINE Alu 120 300 -12 2095 113 3 0 chr5 9901452 9901754 -193183778 - AluSx SINE Alu 0 303 1 239 306 74 19 chr5 9903567 9903675 -193181857 - MIR3 SINE MIR -14 194 81 363 221 102 31 chr5 9904441 9904568 -193180964 + MIR SINE MIR 27 162 -46 229 245 0 0 chr5 9904915 9904964 -193180568 + MLT1L LTR MaLR 4 52 -563 525 133 37 3 chr5 9904967 9905103 -193180429 + MER53 DNA DNA 1 184 -5 372 306 137 32 chr5 9905229 9905477 -193180055 + MLT1J LTR MaLR 238 511 0 556 259 57 31 chr5 9906217 9906410 -193179122 - MER5C DNA MER1_type -3 321 124 243 293 60 26 chr5 9906732 9906848 -193178684 - MER5B DNA MER1_type -58 120 1 21 0 0 0 chr5 9907003 9907024 -193178508 + AT_rich Low_complexity Low_complexity 1 21 0 1193 40 14 0 chr5 9912007 9912155 -193173377 + L1PA2 LINE L1 6006 6155 0 566 219 5 110 chr5 9912313 9912370 -193173162 + L1M4 LINE L1 3294 3355 -2791 1537 133 12 40 chr5 9912370 9912618 -193172914 - AluJo SINE Alu -14 298 58 566 219 5 110 chr5 9912618 9912779 -193172753 + L1M4 LINE L1 3355 3489 -2657 19417 123 35 27 chr5 9912907 9916381 -193169151 + L1P LINE L1 12 3513 -2633 4508 74 0 0 chr5 9916381 9916947 -193168585 + L1PA7 LINE L1 5586 6152 -2 537 253 6 77 chr5 9917014 9917138 -193168394 + L1ME1 LINE L1 5993 6102 -64 2462 70 3 0 chr5 9917138 9917436 -193168096 - AluSp SINE Alu -14 299 1 537 253 6 77 chr5 9917436 9917493 -193168039 + L1ME1 LINE L1 6102 6161 -5 4812 205 82 10 chr5 9918823 9919204 -193166328 + Cheshire DNA MER1_type 532 884 -1536 1767 171 51 3 chr5 9919204 9919496 -193166036 + AluJb SINE Alu 1 306 -6 4812 205 82 10 chr5 9919496 9920845 -193164687 + Cheshire DNA MER1_type 884 2415 -5 683 134 79 31 chr5 9922139 9922266 -193163266 + FLAM_C SINE Alu 1 133 0 216 290 197 2 chr5 9922561 9922683 -193162849 - MIR SINE MIR -62 146 9 297 250 138 20 chr5 9922801 9922997 -193162535 + L1ME4a LINE L1 5881 6099 -22 999 219 90 68 chr5 9924157 9924477 -193161055 + MER93b LTR ERV1 1 331 -42 1739 124 98 0 chr5 9924477 9924742 -193160790 - AluSq SINE Alu -22 291 1 999 219 90 68 chr5 9924742 9924786 -193160746 + MER93b LTR ERV1 331 373 0 217 198 77 121 chr5 9925982 9926073 -193159459 + L2 LINE L2 3186 3272 0 307 344 118 24 chr5 9927164 9927376 -193158156 - MIR SINE MIR -16 246 15 246 204 0 0 chr5 9927807 9927851 -193157681 - MIR SINE MIR -147 115 72 1198 132 0 16 chr5 9928416 9928624 -193156908 - AluSg/x SINE Alu 0 338 134 2115 68 4 4 chr5 9931684 9931989 -193153543 - AluY SINE Alu 0 305 1 1391 129 0 0 chr5 9932286 9932495 -193153037 + AluSg/x SINE Alu 89 297 -13 1541 173 80 26 chr5 9932785 9933137 -193152395 - THE1C LTR MaLR 0 375 5 1858 147 0 7 chr5 9933748 9934041 -193151491 - AluJb SINE Alu -21 291 1 1678 167 17 0 chr5 9934449 9934736 -193150796 - AluSq SINE Alu -21 292 1 309 130 0 0 chr5 9935046 9935092 -193150440 - FLAM SINE Alu -7 126 81 1408 152 110 15 chr5 9936157 9936421 -193149111 + AluSx SINE Alu 5 293 -19 31 0 0 0 chr5 9936453 9936484 -193149048 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr5 9936664 9936693 -193148839 + AT_rich Low_complexity Low_complexity 1 29 0 404 319 105 26 chr5 9938524 9938790 -193146742 + L3 LINE CR1 626 912 -665 201 74 0 0 chr5 9939739 9939766 -193145766 + (T)n Simple_repeat Simple_repeat 1 27 0 637 255 30 81 chr5 9939874 9939930 -193145602 - MIR SINE MIR 0 262 205 2336 88 3 0 chr5 9939930 9940238 -193145294 - AluSp SINE Alu -4 309 1 637 255 30 81 chr5 9940238 9940416 -193145116 - MIR SINE MIR -57 205 40 2433 57 0 0 chr5 9941038 9941337 -193144195 - AluY SINE Alu -12 299 1 258 32 0 0 chr5 9941431 9941462 -193144070 + (TTA)n Simple_repeat Simple_repeat 1 31 0 199 286 143 0 chr5 9941486 9941556 -193143976 + MIR SINE MIR 7 86 -176 23 33 0 0 chr5 9945742 9945772 -193139760 + AT_rich Low_complexity Low_complexity 1 30 0 3323 203 20 16 chr5 9946131 9946865 -193138667 - L1MB3 LINE L1 -10 6173 5437 195 171 0 29 chr5 9947925 9947960 -193137572 - MIR SINE MIR -142 66 33 2322 81 10 0 chr5 9948747 9949055 -193136477 - AluSx SINE Alu -1 311 1 917 248 22 47 chr5 9950703 9951025 -193134507 - L1MB7 LINE L1 -10 6174 5861 22 0 0 0 chr5 9951404 9951426 -193134106 + AT_rich Low_complexity Low_complexity 1 22 0 2071 99 27 10 chr5 9952169 9952463 -193133069 - AluSx SINE Alu -13 299 1 1635 160 0 45 chr5 9952492 9952804 -193132728 + AluJb SINE Alu 1 298 -14 216 300 171 33 chr5 9953290 9953500 -193132032 - L3 LINE CR1 -912 665 427 227 273 45 0 chr5 9954065 9954131 -193131401 - Charlie5 DNA MER1_type -2543 69 1 209 346 39 0 chr5 9954740 9954818 -193130714 + MIR SINE MIR 59 139 -123 183 240 60 0 chr5 9955940 9955990 -193129542 - L3 LINE CR1 -1169 408 356 2429 43 0 7 chr5 9956285 9956586 -193128946 + AluY SINE Alu 1 299 -12 1760 132 11 0 chr5 9956904 9957169 -193128363 + AluSg SINE Alu 28 295 -15 2413 69 3 0 chr5 9959156 9959460 -193126072 - AluY SINE Alu -6 305 1 276 342 37 19 chr5 9960860 9961021 -193124511 - MIR SINE MIR -41 221 58 23 0 0 0 chr5 9963310 9963333 -193122199 + AT_rich Low_complexity Low_complexity 1 23 0 1956 270 124 21 chr5 9963873 9964829 -193120703 - L1MC4 LINE L1 -52 7990 6936 589 282 108 35 chr5 9964919 9965291 -193120241 + HAL1 LINE L1 578 976 -1531 245 289 138 36 chr5 9965711 9966016 -193119516 + L1MC4a LINE L1 5688 6023 -1785 1574 202 136 0 chr5 9966069 9966436 -193119096 - MER47B DNA MER2_type 0 418 2 312 217 79 21 chr5 9966744 9966895 -193118637 + MLT1F LTR MaLR 24 189 -378 2373 204 78 2 chr5 9966911 9967425 -193118107 - MER68 LTR ERV1 0 562 10 439 226 0 39 chr5 9967467 9967569 -193117963 + MLT1F LTR MaLR 314 411 -182 2383 128 0 0 chr5 9967619 9967954 -193117578 - THE1B LTR MaLR 0 364 30 4766 132 69 55 chr5 9967973 9968859 -193116673 - MER49 LTR ERV1 -25 898 1 618 194 45 8 chr5 9968859 9968992 -193116540 + MLT1F LTR MaLR 405 542 0 602 230 11 79 chr5 9968992 9969131 -193116401 + MIR SINE MIR 69 195 -67 4309 71 54 2 chr5 9969131 9969709 -193115823 + LTR14B LTR ERVK 1 608 0 602 230 11 79 chr5 9969709 9969747 -193115785 + MIR SINE MIR 195 234 -28 748 223 127 75 chr5 9970622 9970968 -193114564 - LTR16A LTR ERVL -2 448 85 2379 55 0 23 chr5 9971158 9971468 -193114064 + AluY SINE Alu 1 303 -8 510 296 102 39 chr5 9973128 9973166 -193112366 - L1MC4a LINE L1 -1842 5966 5932 1901 141 10 0 chr5 9973166 9973457 -193112075 - AluSx SINE Alu -18 294 1 510 296 102 39 chr5 9973457 9973780 -193111752 - L1MC4a LINE L1 -1876 5932 5582 456 275 85 106 chr5 9973852 9975128 -193110404 + L1M2 LINE L1 1595 4189 -2659 317 330 77 84 chr5 9975194 9975727 -193109805 + L1M4 LINE L1 3956 4484 -2364 272 252 16 32 chr5 9975906 9976029 -193109503 + L1M4 LINE L1 4630 4750 -2098 833 133 15 30 chr5 9976050 9976185 -193109347 - AluSq/x SINE Alu -179 134 2 337 282 77 29 chr5 9976400 9976570 -193108962 + L1M4 LINE L1 5906 6083 -765 315 176 305 53 chr5 9977199 9977330 -193108202 + L2 LINE L2 3147 3310 -3 1293 213 168 22 chr5 9978860 9979264 -193106268 - MLT1C LTR MaLR 0 467 5 207 224 41 0 chr5 9979900 9979949 -193105583 + CT-rich Low_complexity Low_complexity 3 53 0 22 35 0 0 chr5 9981043 9981072 -193104460 + GC_rich Low_complexity Low_complexity 1 29 0 241 256 124 41 chr5 9982451 9982572 -193102960 + MIR3 SINE MIR 74 204 -4 1616 188 161 49 chr5 9982581 9982766 -193102766 + LTR44 LTR ERV1 1 164 -355 775 224 18 12 chr5 9982766 9982931 -193102601 - FRAM SINE Alu 0 166 1 1616 188 161 49 chr5 9982931 9983212 -193102320 + LTR44 LTR ERV1 164 519 0 328 310 123 7 chr5 9983498 9983653 -193101879 + L1MC4a LINE L1 5265 5437 -727 668 303 100 20 chr5 9983678 9984028 -193101504 + L1MC4a LINE L1 5517 5894 -1914 2185 141 33 33 chr5 9984627 9984989 -193100543 + THE1B LTR MaLR 3 364 0 1060 188 0 11 chr5 9986763 9986949 -193098583 - AluJb SINE Alu -10 302 119 1695 191 13 34 chr5 9986953 9987323 -193098209 + MLT2C1 LTR ERVL 9 534 -20 190 0 67 0 chr5 9987442 9987472 -193098060 + (TTTTC)n Simple_repeat Simple_repeat 3 34 0 2566 65 10 0 chr5 9988211 9988519 -193097013 - AluY SINE Alu 0 311 1 2396 97 0 3 chr5 9988521 9988821 -193096711 - AluSg SINE Alu -11 299 1 538 241 82 55 chr5 9989022 9989279 -193096253 - LTR37B LTR ERV1 -64 404 141 540 219 48 37 chr5 9989991 9990178 -193095354 + MER53 DNA DNA 1 189 0 371 232 18 9 chr5 9990406 9990518 -193095014 - MER89 LTR ERV1 0 559 447 634 192 41 7 chr5 9990892 9991038 -193094494 + MER20 DNA MER1_type 3 153 -66 509 236 76 55 chr5 9991486 9991761 -193093771 - MLT2F LTR ERVL -149 514 234 240 299 39 24 chr5 9991795 9991922 -193093610 - MLT2F LTR ERVL -533 130 2 479 111 0 67 chr5 9992181 9992271 -193093261 + FLAM_C SINE Alu 60 143 0 401 210 5 38 chr5 9992358 9992544 -193092988 + CT-rich Low_complexity Low_complexity 1 180 0 372 315 0 0 chr5 9993044 9993206 -193092326 + A-rich Low_complexity Low_complexity 1 162 0 429 110 37 0 chr5 9993344 9993426 -193092106 + CT-rich Low_complexity Low_complexity 4 88 0 21 57 0 0 chr5 9994120 9994155 -193091377 + AT_rich Low_complexity Low_complexity 1 35 0 377 68 14 7 chr5 9994161 9994233 -193091299 - MLT2A1 LTR ERVL 0 453 400 181 160 20 20 chr5 9994251 9994301 -193091231 + (TA)n Simple_repeat Simple_repeat 2 51 0 2935 78 5 5 chr5 9994374 9994772 -193090760 - MLT2A1 LTR ERVL -44 400 3 369 252 0 27 chr5 9994831 9994942 -193090590 - L1MC5 LINE L1 -48 7913 7806 243 0 0 0 chr5 9994961 9994988 -193090544 + (CA)n Simple_repeat Simple_repeat 1 27 0 232 279 35 35 chr5 9995204 9995290 -193090242 + L2 LINE L2 3136 3221 -51 403 229 221 0 chr5 9995500 9995640 -193089892 - MER5B DNA MER1_type -1 177 7 616 252 157 34 chr5 9996092 9996597 -193088935 + MLT1E2 LTR MaLR 1 574 -52 288 0 0 0 chr5 9996625 9996657 -193088875 + (TA)n Simple_repeat Simple_repeat 1 32 0 198 0 0 0 chr5 9996656 9996678 -193088854 + (CA)n Simple_repeat Simple_repeat 2 23 0 * 1631 179 26 47 chr5 9996678 9996710 -193088822 - L1MB4 LINE L1 -17 6163 6132 2133 109 0 45 chr5 9996710 9997021 -193088511 - AluSx SINE Alu -13 299 3 1631 179 26 47 chr5 9997021 9997373 -193088159 - L1MB4 LINE L1 -48 6132 5787 254 254 45 0 chr5 9997597 9997664 -193087868 - MIR SINE MIR -104 158 89 1241 81 192 0 chr5 9998073 9998307 -193087225 - L1MA7 LINE L1 0 6291 6013 528 225 47 30 chr5 9998781 9998950 -193086582 - MER5B DNA MER1_type -6 172 1 793 305 105 35 chr5 9999107 9999710 -193085822 + L1ME3A LINE L1 3613 4172 -1974 2292 96 10 0 chr5 9999710 10000002 -193085530 + AluY SINE Alu 1 295 -16 793 305 105 35 chr5 10000002 10000742 -193084790 + L1ME3A LINE L1 4172 5093 -1053 1368 256 73 16 chr5 10000828 10001469 -193084063 + L1ME3A LINE L1 5262 5939 -231 * 4193 182 32 78 chr5 10001467 10001661 -193083871 - L1MB1 LINE L1 -5 6163 5962 2374 128 81 2 chr5 10001661 10002058 -193083474 - MSTC LTR MaLR 0 428 1 4193 182 32 78 chr5 10002058 10002961 -193082571 - L1MB1 LINE L1 -206 5962 5019 1100 95 0 0 chr5 10002961 10003098 -193082434 - AluSc SINE Alu -45 264 128 4193 182 32 78 chr5 10003098 10003695 -193081837 - L1MB1 LINE L1 -1149 5019 4396 2533 69 0 0 chr5 10003695 10003998 -193081534 - AluY SINE Alu -8 303 1 4193 182 32 78 chr5 10003998 10004187 -193081345 - L1MB1 LINE L1 -1772 4396 4259 180 0 0 0 chr5 10004187 10004207 -193081325 + (TG)n Simple_repeat Simple_repeat 1 20 0 4193 182 32 78 chr5 10004207 10004332 -193081200 - L1MB1 LINE L1 -1909 4259 4130 798 227 23 6 chr5 10005909 10006081 -193079451 - MLT1A2 LTR MaLR -184 346 172 698 269 45 25 chr5 10006535 10006983 -193078549 - MER76 LTR ERV -167 521 1 1031 319 92 67 chr5 10008267 10008350 -193077182 + L1M4 LINE L1 2160 2239 -3907 1406 197 100 4 chr5 10008350 10008619 -193076913 + AluJo SINE Alu 1 295 -17 1031 319 92 67 chr5 10008619 10009477 -193076055 + L1M4 LINE L1 2239 3130 -3016 2520 64 3 0 chr5 10009477 10009775 -193075757 - AluY SINE Alu -12 299 1 1031 319 92 67 chr5 10009775 10009824 -193075708 + L1M4 LINE L1 3130 3176 -2970 319 282 77 29 chr5 10011077 10011247 -193074285 - L1M4 LINE L1 -765 5381 5204 2126 134 3 0 chr5 10011461 10011759 -193073773 + AluSq SINE Alu 1 299 -14 2908 182 32 13 chr5 10011768 10012389 -193073143 + L1MB8 LINE L1 5511 6143 -35 236 320 124 0 chr5 10012809 10012906 -193072626 + MIR3 SINE MIR 6 114 -94 2277 106 25 17 chr5 10013471 10013829 -193071703 - THE1C LTR MaLR -2 373 13 2038 92 0 32 chr5 10014886 10015167 -193070365 + AluSx SINE Alu 34 305 -7 504 254 294 13 chr5 10015167 10015535 -193069997 - L2 LINE L2 -1733 1581 1103 336 269 11 0 chr5 10015655 10015748 -193069784 - MER5A DNA MER1_type -83 106 13 1097 273 39 3 chr5 10015978 10016333 -193069199 + MER87 LTR ERV1 174 541 0 259 307 144 20 chr5 10016336 10016538 -193068994 - L2 LINE L2 -2833 481 255 1097 269 70 14 chr5 10017045 10017476 -193068056 - MLT1C LTR MaLR 0 467 13 348 24 0 0 chr5 10017958 10017999 -193067533 + (TG)n Simple_repeat Simple_repeat 2 42 0 890 220 6 0 chr5 10018031 10018213 -193067319 - MLT1A2 LTR MaLR -187 187 5 334 224 0 0 chr5 10019517 10019584 -193065948 + MER20 DNA MER1_type 1 67 -152 2058 191 20 54 chr5 10019609 10019722 -193065810 - L1MB5 LINE L1 0 6174 6059 2364 84 11 0 chr5 10019722 10020009 -193065523 - AluSq SINE Alu -21 292 3 2058 191 20 54 chr5 10020009 10020391 -193065141 - L1MB5 LINE L1 -115 6059 5696 892 183 18 0 chr5 10020398 10020562 -193064970 + MER20 DNA MER1_type 50 216 -3 928 285 171 34 chr5 10020666 10021350 -193064182 + L2 LINE L2 2499 3313 0 1081 109 16 0 chr5 10022507 10022837 -193062695 + (TCCA)n Simple_repeat Simple_repeat 2 513 0 377 319 35 0 chr5 10022849 10022962 -193062570 - L2 LINE L2 -1 3312 3196 361 323 93 0 chr5 10022960 10023121 -193062411 - MIR3 SINE MIR -13 195 20 * 2145 148 32 53 chr5 10023286 10023718 -193061814 - Tigger2a DNA MER2_type -11 423 1 973 214 15 9 chr5 10023784 10024074 -193061458 - MLT2B1 LTR ERVL -164 250 1 2323 102 23 3 chr5 10024435 10024739 -193060793 - AluSx SINE Alu -2 310 1 436 267 125 46 chr5 10026667 10026907 -193058625 + L1MB3 LINE L1 4399 4657 -1489 615 341 41 45 chr5 10027245 10027568 -193057964 + L1MB3 LINE L1 5215 5540 -940 206 61 0 30 chr5 10027568 10027601 -193057931 + (TGGGGG)n Simple_repeat Simple_repeat 4 35 0 615 341 41 45 chr5 10027601 10027775 -193057757 + L1MB3 LINE L1 5540 5713 -767 485 207 17 9 chr5 10027827 10027943 -193057589 + MLT2C1 LTR ERVL 1 117 -280 2627 161 21 2 chr5 10027943 10028415 -193057117 - MER41B LTR ERV1 0 635 155 2458 85 3 0 chr5 10028466 10028771 -193056761 - AluSp SINE Alu -7 306 1 613 193 14 0 chr5 10030396 10030541 -193054991 + GA-rich Low_complexity Low_complexity 3 149 0 1001 105 15 90 chr5 10031268 10031365 -193054167 - MER2 DNA MER2_type -160 185 109 1815 166 14 3 chr5 10031365 10031654 -193053878 - AluJb SINE Alu -20 292 1 1001 105 15 90 chr5 10031654 10031756 -193053776 - MER2 DNA MER2_type -236 109 1 830 321 118 0 chr5 10031794 10032143 -193053389 + MLT1J LTR MaLR 1 390 -121 24 0 0 0 chr5 10034411 10034435 -193051097 + AT_rich Low_complexity Low_complexity 1 24 0 1552 32 0 11 chr5 10034475 10034663 -193050869 - L1PA4 LINE L1 -1 6154 5969 483 182 71 14 chr5 10035264 10035428 -193050104 - MLT2C2 LTR ERVL 0 414 202 1490 170 58 21 chr5 10035490 10035820 -193049712 - MLT2C2 LTR ERVL -122 342 1 280 318 11 0 chr5 10035886 10035974 -193049558 + MIR SINE MIR 94 182 -80 459 296 121 19 chr5 10037181 10037387 -193048145 - L3 LINE CR1 -11 1566 1340 2796 35 0 0 chr5 10037387 10037699 -193047833 - AluYb8 SINE Alu -1 317 6 1108 191 18 0 chr5 10038101 10038326 -193047206 + L1MB3 LINE L1 5744 5972 -211 662 226 0 7 chr5 10038328 10038474 -193047058 + L1MB3 LINE L1 6036 6180 -3 880 225 96 51 chr5 10038947 10039302 -193046230 + MLT1A2 LTR MaLR 4 374 0 235 301 55 33 chr5 10040161 10040344 -193045188 - L1MEd LINE L1 -5903 216 30 480 350 10 10 chr5 10040585 10040779 -193044753 - L3 LINE CR1 -729 848 655 311 366 77 11 chr5 10040920 10041103 -193044429 - L3 LINE CR1 -988 589 395 957 172 6 0 chr5 10042406 10042580 -193042952 - MER53 DNA DNA -13 176 2 1476 236 31 74 chr5 10043089 10043644 -193041888 + MER65B LTR ERV1 1 531 0 2324 98 46 52 chr5 10043908 10044274 -193041258 + THE1B LTR MaLR 1 364 0 816 234 49 16 chr5 10044772 10045016 -193040516 + MER34 LTR ERV1 34 285 -257 1162 218 99 92 chr5 10045016 10045831 -193039701 + MER65B-int LTR ERV1 725 2490 -2381 1567 85 9 9 chr5 10045831 10046055 -193039477 - L1PA10 LINE L1 -1 6167 5944 369 0 0 0 chr5 10046235 10046276 -193039256 + (TA)n Simple_repeat Simple_repeat 2 42 0 2375 108 0 0 chr5 10046276 10046581 -193038951 - AluSq SINE Alu -8 305 1 259 170 30 156 chr5 10046608 10046743 -193038789 + MER65B-int LTR ERV1 1601 1718 -6402 366 277 49 48 chr5 10046877 10047135 -193038397 + MER65B-int LTR ERV1 2944 4195 -1719 437 275 21 47 chr5 10047432 10047625 -193037907 + MER65B-int LTR ERV1 3545 3732 -2866 1479 194 10 14 chr5 10047674 10049230 -193036302 + MER65B-int LTR ERV1 2842 5772 -491 1315 257 81 19 chr5 10049236 10049606 -193035926 + MER65B-int LTR ERV1 3629 4021 -850 2190 110 0 42 chr5 10049928 10049959 -193035573 - AluSq SINE Alu -16 297 266 2444 57 14 7 chr5 10049959 10050255 -193035277 - AluY SINE Alu -13 298 1 2190 110 0 42 chr5 10050255 10050533 -193034999 - AluSq SINE Alu -47 266 1 1251 275 22 6 chr5 10050623 10050987 -193034545 + MER65B-int LTR ERV1 4502 4871 0 1675 236 29 45 chr5 10050987 10051066 -193034466 + MER65B LTR ERV1 1 80 -451 2510 118 47 35 chr5 10051066 10051489 -193034043 + MSTA LTR MaLR 1 428 0 1675 236 29 45 chr5 10051489 10051769 -193033763 + MER65B LTR ERV1 80 352 -179 2066 45 16 0 chr5 10051769 10052013 -193033519 + AluY SINE Alu 62 309 -2 1675 236 29 45 chr5 10052013 10052169 -193033363 + MER65B LTR ERV1 352 509 -22 216 307 98 42 chr5 10052238 10052637 -193032895 - L2 LINE L2 -203 3110 2647 1973 153 124 3 chr5 10054026 10054404 -193031128 - MSTA LTR MaLR -4 424 1 587 238 131 0 chr5 10054440 10054600 -193030932 - MLT1D LTR MaLR 0 505 325 741 223 60 30 chr5 10054641 10054874 -193030658 - MLT1D LTR MaLR -258 247 8 183 42 0 0 chr5 10054952 10054976 -193030556 + (GGCTG)n Simple_repeat Simple_repeat 1 24 0 1015 234 52 101 chr5 10057222 10057706 -193027826 + MLT1C LTR MaLR 6 465 -2 225 259 0 0 chr5 10057860 10057914 -193027618 - MLT1E3 LTR MaLR -17 607 554 2297 88 3 3 chr5 10057915 10058222 -193027310 + L1PB1 LINE L1 5843 6149 -2 1383 220 79 86 chr5 10058231 10058803 -193026729 - MLT1E1 LTR MaLR -24 630 63 614 289 87 24 chr5 10059347 10059645 -193025887 + L1MC4a LINE L1 5578 5894 -1914 2200 138 33 33 chr5 10060244 10060606 -193024926 + THE1B LTR MaLR 3 364 0 1074 183 0 11 chr5 10062380 10062566 -193022966 - AluJb SINE Alu -10 302 119 1695 191 13 34 chr5 10062570 10062940 -193022592 + MLT2C1 LTR ERVL 9 534 -20 190 0 67 0 chr5 10063059 10063089 -193022443 + (TTTTC)n Simple_repeat Simple_repeat 3 34 0 2555 65 10 0 chr5 10063828 10064136 -193021396 - AluY SINE Alu 0 311 1 2396 97 0 3 chr5 10064138 10064438 -193021094 - AluSg SINE Alu -11 299 1 527 245 82 55 chr5 10064643 10064900 -193020632 - LTR37B LTR ERV1 -64 404 141 540 219 48 37 chr5 10065612 10065799 -193019733 + MER53 DNA DNA 1 189 0 401 223 18 9 chr5 10066028 10066140 -193019392 - MER89 LTR ERV1 0 559 447 634 192 41 7 chr5 10066514 10066660 -193018872 + MER20 DNA MER1_type 3 153 -66 487 240 76 55 chr5 10067109 10067384 -193018148 - MLT2F LTR ERVL -149 514 234 235 299 39 24 chr5 10067418 10067545 -193017987 - MLT2F LTR ERVL -533 130 2 504 106 0 64 chr5 10067800 10067894 -193017638 + FLAM_C SINE Alu 56 143 0 728 169 29 0 chr5 10068047 10068219 -193017313 + CT-rich Low_complexity Low_complexity 4 180 0 970 320 77 68 chr5 10068544 10069417 -193016115 + L1M4 LINE L1 2246 3129 -3017 2560 60 3 0 chr5 10069417 10069717 -193015815 - AluY SINE Alu -10 301 1 970 320 77 68 chr5 10069717 10069766 -193015766 + L1M4 LINE L1 3129 3176 -2970 234 0 0 0 chr5 10070451 10070477 -193015055 + (TG)n Simple_repeat Simple_repeat 2 27 0 1430 160 9 4 chr5 10070504 10070735 -193014797 + AluSg/x SINE Alu 65 296 -14 182 191 0 32 chr5 10070815 10070878 -193014654 + CT-rich Low_complexity Low_complexity 4 64 0 184 246 290 14 chr5 10071350 10071488 -193014044 + MER5B DNA MER1_type 3 178 0 473 245 64 56 chr5 10071855 10072058 -193013474 + MIR SINE MIR 3 207 -55 502 283 83 86 chr5 10072228 10072649 -193012883 - L2 LINE L2 -5 3267 2848 189 281 104 21 chr5 10072781 10072877 -193012655 + MIR3 SINE MIR 77 180 -28 453 320 172 24 chr5 10075735 10076113 -193009419 + L1M4 LINE L1 4399 4832 -1314 434 341 155 17 chr5 10077986 10078347 -193007185 + L2 LINE L2 2555 2965 -349 3212 207 47 5 chr5 10079003 10079896 -193005636 - L1 LINE L1 -2583 3563 2633 1449 168 47 7 chr5 10080186 10080483 -193005049 + L1PB3 LINE L1 5845 6153 -1 5395 144 41 3 chr5 10083522 10085021 -193000511 - L1PB3 LINE L1 0 6154 4601 249 180 0 0 chr5 10087385 10087435 -192998097 + (TATG)n Simple_repeat Simple_repeat 2 51 0 4061 213 54 16 chr5 10087514 10089281 -192996251 - L1P LINE L1 -3638 3159 1326 2103 242 3 45 chr5 10089284 10089909 -192995623 + L1P LINE L1 3152 3750 -3047 1252 89 187 0 chr5 10090123 10090358 -192995174 + L1MA7 LINE L1 6013 6291 0 241 269 45 0 chr5 10090763 10090830 -192994702 + MIR SINE MIR 89 158 -104 1755 179 32 17 chr5 10091055 10091402 -192994130 + L1MB3 LINE L1 5788 6139 -44 2034 105 0 45 chr5 10091407 10091720 -192993812 + AluSx SINE Alu 3 301 -11 423 0 0 0 chr5 10091753 10091800 -192993732 + (TG)n Simple_repeat Simple_repeat 2 48 0 207 325 0 0 chr5 10092069 10092152 -192993380 + A-rich Low_complexity Low_complexity 1 83 0 236 259 0 0 chr5 10092501 10092555 -192992977 - MLT1E3 LTR MaLR -17 607 554 2290 86 3 3 chr5 10092556 10092860 -192992672 + L1PB1 LINE L1 5843 6146 -5 1605 213 79 86 chr5 10092872 10093444 -192992088 - MLT1E1 LTR MaLR -24 630 63 1158 133 4 4 chr5 10094996 10095239 -192990293 + (TCCA)n Simple_repeat Simple_repeat 1 243 0 700 123 0 15 chr5 10095252 10095382 -192990150 + (TCCA)n Simple_repeat Simple_repeat 2 129 0 533 171 7 110 chr5 10096078 10096146 -192989386 - MLT1C LTR MaLR 0 467 394 1718 94 109 8 chr5 10096146 10096402 -192989130 + AluSc SINE Alu 1 282 -27 206 32 32 0 chr5 10096407 10096438 -192989094 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 533 171 7 110 chr5 10096438 10096509 -192989023 - MLT1C LTR MaLR -77 390 337 2102 129 67 14 chr5 10098234 10098590 -192986942 - THE1C LTR MaLR 0 375 1 256 228 18 0 chr5 10102052 10102109 -192983423 - MIR SINE MIR -69 139 82 1724 140 20 3 chr5 10107152 10107445 -192978087 - AluJo SINE Alu -3 309 12 1593 169 23 36 chr5 10107774 10108082 -192977450 - AluJo SINE Alu -8 304 1 189 74 0 0 chr5 10109481 10109508 -192976024 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 971 216 53 0 chr5 10109632 10109840 -192975692 - MER20 DNA MER1_type 0 219 1 262 369 110 28 chr5 10109886 10110203 -192975329 - L2 LINE L2 -1 3271 2929 326 91 18 0 chr5 10110243 10110298 -192975234 + (TG)n Simple_repeat Simple_repeat 2 57 0 837 266 19 9 chr5 10110332 10110546 -192974986 + MIR SINE MIR 47 262 0 329 354 0 19 chr5 10111406 10111567 -192973965 + (TG)n Simple_repeat Simple_repeat 1 158 0 2175 105 0 10 chr5 10113139 10113443 -192972089 - AluSx SINE Alu -11 301 1 554 243 36 0 chr5 10113855 10113995 -192971537 - MER20 DNA MER1_type -68 151 7 1500 228 85 7 chr5 10114256 10114681 -192970851 - MLT1C LTR MaLR -4 463 6 485 327 23 32 chr5 10116202 10116419 -192969113 - MIR SINE MIR -32 230 16 243 328 113 41 chr5 10121569 10121764 -192963768 - MIR SINE MIR -32 230 22 210 333 114 40 chr5 10121971 10122172 -192963360 - MIR SINE MIR -26 236 21 384 148 59 2 chr5 10123049 10123138 -192962394 + MLT1J2 LTR MaLR 68 141 -309 435 373 97 35 chr5 10123368 10124164 -192961368 + L1ME LINE L1 4657 5512 -764 1480 231 73 31 chr5 10124832 10125375 -192960157 + MLT1F1 LTR MaLR 1 566 -1 448 246 62 61 chr5 10125626 10125792 -192959740 + L1ME LINE L1 5495 5666 -455 195 184 0 0 chr5 10126052 10126090 -192959442 + (TG)n Simple_repeat Simple_repeat 2 39 0 188 322 0 78 chr5 10126701 10126791 -192958741 + L3 LINE CR1 356 438 -1139 310 267 0 40 chr5 10126991 10127092 -192958440 - L1MC4 LINE L1 -1338 6704 6608 262 219 42 0 chr5 10127132 10127228 -192958304 + (TA)n Simple_repeat Simple_repeat 1 100 0 1771 171 45 19 chr5 10128957 10129331 -192956201 + MLT1B LTR MaLR 4 387 -3 237 111 0 63 chr5 10129373 10129436 -192956096 + (GGGA)n Simple_repeat Simple_repeat 2 60 0 269 326 0 0 chr5 10130512 10130598 -192954934 + GA-rich Low_complexity Low_complexity 1 86 0 1931 144 3 0 chr5 10131307 10131606 -192953926 + AluSx SINE Alu 7 306 -6 832 88 0 18 chr5 10132499 10132613 -192952919 + AluSp/q SINE Alu 185 296 -17 2464 53 0 0 chr5 10132661 10132989 -192952543 + AluY SINE Alu 1 328 0 1553 216 71 38 chr5 10136626 10137074 -192948458 + Charlie4a DNA MER1_type 4 466 -42 474 291 7 0 chr5 10138880 10139021 -192946511 + MIR SINE MIR 102 243 -19 412 276 41 29 chr5 10140889 10141059 -192944473 + MER5B DNA MER1_type 7 178 0 1771 133 14 30 chr5 10142037 10142377 -192943155 + MLT1B LTR MaLR 1 390 0 1946 141 7 7 chr5 10142405 10142695 -192942837 + AluJo SINE Alu 1 290 -22 243 152 0 0 chr5 10142843 10142889 -192942643 + (TG)n Simple_repeat Simple_repeat 1 46 0 25 0 0 0 chr5 10144228 10144253 -192941279 + AT_rich Low_complexity Low_complexity 1 25 0 250 303 9 28 chr5 10145342 10145451 -192940081 + MIR3 SINE MIR 102 208 0 326 330 0 58 chr5 10146830 10147021 -192938511 + G-rich Low_complexity Low_complexity 1 180 0 24 0 0 0 chr5 10147264 10147288 -192938244 + GC_rich Low_complexity Low_complexity 1 24 0 21 36 0 0 chr5 10147302 10147330 -192938202 + GC_rich Low_complexity Low_complexity 1 28 0 38 68 0 0 chr5 10147728 10147801 -192937731 + GC_rich Low_complexity Low_complexity 1 73 0 194 0 0 37 chr5 10147849 10147876 -192937656 + (CGAA)n Simple_repeat Simple_repeat 4 29 0 1083 139 0 0 chr5 10148213 10148393 -192937139 + (TTC)n Simple_repeat Simple_repeat 1 180 0 764 224 11 38 chr5 10148447 10148630 -192936902 - MLT1B LTR MaLR -211 179 2 2082 136 19 45 chr5 10149204 10149578 -192935954 + THE1B LTR MaLR 1 364 0 303 311 52 15 chr5 10150314 10150449 -192935083 + MIR SINE MIR 25 164 -98 233 263 84 66 chr5 10150540 10150753 -192934779 + L1MC1 LINE L1 3895 4111 -2035 363 205 18 36 chr5 10151519 10151749 -192933783 + (TATAA)n Simple_repeat Simple_repeat 1 225 0 228 217 29 0 chr5 10151722 10151791 -192933741 + T-rich Low_complexity Low_complexity 1 71 0 * 23 54 0 0 chr5 10151820 10151857 -192933675 + AT_rich Low_complexity Low_complexity 1 37 0 5340 204 15 16 chr5 10152052 10153055 -192932477 + L1MC1 LINE L1 4819 5821 -512 375 23 0 0 chr5 10153055 10153099 -192932433 + (CA)n Simple_repeat Simple_repeat 1 44 0 5340 204 15 16 chr5 10153099 10153247 -192932285 + L1MC1 LINE L1 5821 5968 -365 2044 149 3 0 chr5 10153247 10153556 -192931976 + AluSx SINE Alu 1 310 -2 5340 204 15 16 chr5 10153556 10153920 -192931612 + L1MC1 LINE L1 5968 6333 0 541 240 25 75 chr5 10154004 10154127 -192931405 + MIR SINE MIR 73 184 -78 2115 128 0 16 chr5 10154127 10154431 -192931101 - AluSx SINE Alu -13 299 1 541 240 25 75 chr5 10154431 10154507 -192931025 + MIR SINE MIR 184 262 0 2085 124 25 0 chr5 10155315 10155597 -192929935 + AluSg SINE Alu 5 293 -17 210 118 0 0 chr5 10156066 10156100 -192929432 + (CATATA)n Simple_repeat Simple_repeat 5 38 0 263 191 176 69 chr5 10156101 10156232 -192929300 + L1ME4a LINE L1 5947 6091 -30 202 146 0 24 chr5 10156857 10156898 -192928634 + (TA)n Simple_repeat Simple_repeat 1 40 0 1456 95 21 45 chr5 10157037 10157280 -192928252 + L1PA5 LINE L1 5918 6154 0 186 189 0 0 chr5 10158622 10158659 -192926873 + (CAT)n Simple_repeat Simple_repeat 2 38 0 236 184 207 23 chr5 10158831 10158918 -192926614 + MIR SINE MIR 52 154 -108 816 267 42 14 chr5 10159861 10160208 -192925324 + L1ME LINE L1 524 873 -5197 680 191 58 143 chr5 10162249 10162393 -192923139 - MLT1B LTR MaLR -122 268 160 2192 129 36 33 chr5 10162393 10162756 -192922776 + THE1B LTR MaLR 1 364 0 680 191 58 143 chr5 10162756 10162904 -192922628 - MLT1B LTR MaLR -230 160 1 327 165 22 11 chr5 10163484 10163575 -192921957 + (CA)n Simple_repeat Simple_repeat 2 93 0 535 299 58 17 chr5 10163938 10164179 -192921353 - LTR16C LTR ERVL -94 397 147 1297 163 0 5 chr5 10164256 10164465 -192921067 + AluJb SINE Alu 86 293 -19 216 135 0 0 chr5 10164479 10164516 -192921016 + (CA)n Simple_repeat Simple_repeat 2 38 0 3103 140 45 18 chr5 10164751 10165302 -192920230 + L1MB3 LINE L1 5618 6183 0 198 305 17 0 chr5 10166229 10166288 -192919244 + L2 LINE L2 3249 3308 -5 1937 103 107 7 chr5 10169569 10169850 -192915682 + AluSx SINE Alu 1 309 -3 766 235 6 0 chr5 10170732 10170894 -192914638 - MLT1E2 LTR MaLR -6 499 337 1162 249 24 42 chr5 10170944 10171322 -192914210 + MLT1C LTR MaLR 97 467 0 1026 226 65 62 chr5 10171339 10171675 -192913857 - MLT1E2 LTR MaLR -289 337 1 199 307 150 13 chr5 10172078 10172231 -192913301 - L2 LINE L2 -222 3050 2877 673 122 9 0 chr5 10172454 10172561 -192912971 + MER50 LTR ERV1 497 604 -130 908 249 128 21 chr5 10175019 10175348 -192910184 - MLT1D LTR MaLR -6 499 136 599 148 9 19 chr5 10175468 10175576 -192909956 - MLT2C2 LTR ERVL -357 107 1 1453 237 58 17 chr5 10176330 10176747 -192908785 + MLT1C LTR MaLR 1 434 -33 1332 115 0 6 chr5 10176759 10176941 -192908591 - AluSq SINE Alu -132 181 1 2078 119 0 7 chr5 10177728 10178021 -192907511 + AluSx SINE Alu 1 291 -21 23 54 0 0 chr5 10178542 10178579 -192906953 + AT_rich Low_complexity Low_complexity 1 37 0 309 206 39 59 chr5 10178593 10178695 -192906837 + MIR3 SINE MIR 86 185 -23 407 339 5 16 chr5 10179508 10179700 -192905832 - MIR SINE MIR -29 233 44 287 269 0 0 chr5 10180370 10180437 -192905095 + CT-rich Low_complexity Low_complexity 2 68 0 669 145 51 0 chr5 10182249 10182387 -192903145 + L1MA5 LINE L1 6155 6299 -1 2946 143 65 6 chr5 10182530 10183020 -192902512 - LTR44 LTR ERV1 0 519 1 3055 77 10 2 chr5 10183187 10183588 -192901944 + MLT2A1 LTR ERVL 1 404 -40 326 132 38 0 chr5 10183597 10183650 -192901882 + L1MC4 LINE L1 6649 6703 -1339 231 133 0 0 chr5 10183664 10183709 -192901823 + (TA)n Simple_repeat Simple_repeat 2 46 0 362 253 48 0 chr5 10183718 10183801 -192901731 + L1MC4 LINE L1 6614 6700 -1342 256 85 149 0 chr5 10183802 10183849 -192901683 + MLT2A1 LTR ERVL 391 444 0 306 78 39 0 chr5 10183849 10183900 -192901632 + MLT2A1 LTR ERVL 348 400 -44 213 182 0 0 chr5 10183900 10183933 -192901599 + (TG)n Simple_repeat Simple_repeat 1 33 0 361 270 44 20 chr5 10183933 10184121 -192901411 + L1MC4 LINE L1 6532 6703 -1139 256 85 149 0 chr5 10184122 10184169 -192901363 + MLT2A1 LTR ERVL 391 444 0 430 100 213 0 chr5 10184169 10184209 -192901323 + MLT2A1 LTR ERVL 348 378 -66 228 67 0 0 chr5 10184209 10184239 -192901293 + (TA)n Simple_repeat Simple_repeat 2 31 0 430 100 213 0 chr5 10184239 10184278 -192901254 + MLT2A1 LTR ERVL 378 444 0 294 95 0 0 chr5 10184755 10184797 -192900735 + (TG)n Simple_repeat Simple_repeat 1 42 0 315 49 0 0 chr5 10185256 10185297 -192900235 + (TG)n Simple_repeat Simple_repeat 1 41 0 1542 113 8 8 chr5 10185504 10185743 -192899789 - MER57B LTR ERV1 0 434 196 24 0 0 0 chr5 10186013 10186037 -192899495 + AT_rich Low_complexity Low_complexity 1 24 0 1398 122 15 5 chr5 10186079 10186284 -192899248 - MER57B LTR ERV1 -227 207 1 1704 196 60 3 chr5 10186494 10186811 -192898721 + MLT1A1 LTR MaLR 9 343 -22 557 144 33 0 chr5 10186978 10187068 -192898464 + FLAM_A SINE Alu 32 124 -18 2222 106 6 3 chr5 10188176 10188487 -192897045 - AluSx SINE Alu 0 312 1 389 65 0 81 chr5 10189605 10189645 -192895887 - MLT2B1 LTR ERVL 0 520 485 990 125 0 0 chr5 10189645 10189821 -192895711 + (TA)n Simple_repeat Simple_repeat 2 177 0 389 65 0 81 chr5 10189821 10189842 -192895690 - MLT2B1 LTR ERVL -35 485 464 440 249 18 30 chr5 10189853 10190069 -192895463 + L1MC4 LINE L1 6538 6703 -1139 334 356 0 0 chr5 10189959 10190074 -192895458 - L1MC4 LINE L1 -1339 6703 6589 * 438 223 0 43 chr5 10190073 10190167 -192895365 + L1MC4 LINE L1 6614 6703 -1339 359 306 90 15 chr5 10190145 10190279 -192895253 - L1MC4 LINE L1 -1337 6705 6562 * 1549 234 105 18 chr5 10192408 10192866 -192892666 - MLT1D LTR MaLR 0 505 8 423 255 56 87 chr5 10192892 10193123 -192892409 + MLT1K LTR MaLR 328 551 -37 23 0 0 0 chr5 10193778 10193801 -192891731 + AT_rich Low_complexity Low_complexity 1 23 0 1999 113 0 3 chr5 10194414 10194757 -192890775 + AluSx SINE Alu 1 342 0 224 269 10 0 chr5 10194952 10195056 -192890476 + (TG)n Simple_repeat Simple_repeat 2 106 0 847 239 50 18 chr5 10195404 10195622 -192889910 - MLT1B LTR MaLR 0 390 166 436 189 7 28 chr5 10195624 10195767 -192889765 + CT-rich Low_complexity Low_complexity 1 140 0 755 57 9 0 chr5 10195895 10196000 -192889532 + (TTC)n Simple_repeat Simple_repeat 1 106 0 677 94 48 27 chr5 10196100 10196626 -192888906 + (TG)n Simple_repeat Simple_repeat 1 537 0 795 48 59 12 chr5 10196646 10197041 -192888491 + (TG)n Simple_repeat Simple_repeat 1 413 0 257 50 0 25 chr5 10197583 10197623 -192887909 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 220 281 116 42 chr5 10197728 10197911 -192887621 - MIR SINE MIR -48 160 17 1818 114 0 43 chr5 10198264 10198603 -192886929 + AluSx SINE Alu 14 340 0 430 215 145 50 chr5 10198728 10198970 -192886562 + L1ME4a LINE L1 5720 5984 -137 782 306 31 5 chr5 10200031 10200253 -192885279 - MIR SINE MIR -22 240 13 218 306 74 25 chr5 10200487 10200608 -192884924 - MIR3 SINE MIR -52 156 30 229 299 0 26 chr5 10200655 10200732 -192884800 + G-rich Low_complexity Low_complexity 1 75 0 1066 243 125 33 chr5 10200850 10201293 -192884239 + MLT1G3 LTR MaLR 4 469 -61 6257 134 19 6 chr5 10201341 10203144 -192882388 + L1PA14 LINE L1 4144 6050 -111 2629 99 0 25 chr5 10203144 10203508 -192882024 + THE1A LTR MaLR 1 355 0 6257 134 19 6 chr5 10203508 10203620 -192881912 + L1PA14 LINE L1 6050 6159 -2 310 233 0 14 chr5 10203622 10203695 -192881837 + MLT1G3 LTR MaLR 496 567 0 655 248 125 80 chr5 10203719 10204159 -192881373 + LTR67 LTR ERVL 98 557 0 252 301 96 20 chr5 10204351 10204497 -192881035 + MER117 DNA MER1_type 4 160 -37 368 274 226 12 chr5 10204794 10204958 -192880574 - MLT1J LTR MaLR -312 199 1 293 374 20 20 chr5 10205413 10205616 -192879916 - ERVL LTR ERVL -5133 631 429 29 0 0 0 chr5 10205727 10205756 -192879776 + AT_rich Low_complexity Low_complexity 1 29 0 2002 101 0 14 chr5 10206173 10206449 -192879083 + AluSx SINE Alu 1 272 -40 25 31 0 0 chr5 10206467 10206499 -192879033 + AT_rich Low_complexity Low_complexity 1 32 0 866 142 64 0 chr5 10206509 10206650 -192878882 - FRAM SINE Alu -30 146 1 1992 128 0 10 chr5 10207534 10207832 -192877700 + AluSx SINE Alu 1 295 -17 2419 222 30 29 chr5 10207856 10208481 -192877051 - L1ME2 LINE L1 -4 6160 5535 285 29 0 0 chr5 10208905 10208939 -192876593 + (GA)n Simple_repeat Simple_repeat 1 34 0 2192 101 0 0 chr5 10210468 10210764 -192874768 + AluSx SINE Alu 1 296 -16 1096 178 6 10 chr5 10212096 10212438 -192873094 + MLT1B LTR MaLR 1 390 0 185 300 67 33 chr5 10212966 10213086 -192872446 + L2 LINE L2 3171 3294 -19 5259 130 19 50 chr5 10213923 10214374 -192871158 + L1MA5A LINE L1 5375 5838 -459 1746 117 0 4 chr5 10214374 10214631 -192870901 + AluSx SINE Alu 39 294 -18 5259 130 19 50 chr5 10214631 10214886 -192870646 + L1MA5A LINE L1 5838 6047 -250 2030 143 18 21 chr5 10214886 10215221 -192870311 - MER1B DNA MER1_type 0 337 4 5259 130 19 50 chr5 10215221 10215460 -192870072 + L1MA5A LINE L1 6047 6292 -5 276 200 0 0 chr5 10215618 10215678 -192869854 + CT-rich Low_complexity Low_complexity 2 61 0 260 253 126 0 chr5 10216175 10216262 -192869270 + MIR SINE MIR 93 190 -72 986 243 9 0 chr5 10216388 10216598 -192868934 - MER20 DNA MER1_type -6 213 2 742 175 139 0 chr5 10216717 10216854 -192868678 - AluJb SINE Alu -126 186 31 1982 128 3 0 chr5 10217122 10217419 -192868113 - AluSx SINE Alu -14 298 1 265 279 0 0 chr5 10217478 10217546 -192867986 + (TCCA)n Simple_repeat Simple_repeat 3 70 0 328 266 40 102 chr5 10217573 10217750 -192867782 + L1MC4 LINE L1 6539 6704 -1338 1681 172 0 0 chr5 10217956 10218265 -192867267 - AluJo SINE Alu 0 313 5 763 119 23 28 chr5 10219202 10219378 -192866154 + GA-rich Low_complexity Low_complexity 2 176 0 218 217 0 17 chr5 10219404 10219464 -192866068 + GA-rich Low_complexity Low_complexity 3 61 0 259 254 79 79 chr5 10219511 10219676 -192865856 + MER5B DNA MER1_type 7 171 -7 1896 102 0 38 chr5 10220873 10221210 -192864322 + AluY SINE Alu 1 326 0 1914 117 14 0 chr5 10221283 10221565 -192863967 - AluSc SINE Alu -15 294 9 210 37 0 0 chr5 10221576 10221603 -192863929 + (TTTTC)n Simple_repeat Simple_repeat 4 30 0 * 728 119 8 0 chr5 10221597 10221715 -192863817 + (TTCC)n Simple_repeat Simple_repeat 2 120 0 995 208 55 128 chr5 10221847 10222177 -192863355 - MLT1C LTR MaLR -5 462 178 2180 101 10 0 chr5 10222177 10222483 -192863049 - AluSc SINE Alu 0 309 1 995 208 55 128 chr5 10222483 10222643 -192862889 - MLT1C LTR MaLR -289 178 8 1469 166 28 110 chr5 10223729 10224156 -192861376 + MLT1B LTR MaLR 1 505 0 207 0 0 0 chr5 10225015 10225038 -192860494 + (GGGTG)n Simple_repeat Simple_repeat 2 24 0 306 145 24 76 chr5 10225040 10225158 -192860374 - MER20 DNA MER1_type -62 157 5 200 293 40 13 chr5 10225737 10225812 -192859720 - L3 LINE CR1 -1041 536 460 1594 141 23 19 chr5 10226096 10226359 -192859173 - MER1B DNA MER1_type -2 337 74 513 118 0 0 chr5 10226359 10226427 -192859105 - MER1B DNA MER1_type -156 141 74 744 128 105 45 chr5 10226427 10226560 -192858972 - MER1B DNA MER1_type -156 141 1 209 256 0 0 chr5 10227231 10227274 -192858258 - MIR SINE MIR -80 128 86 207 273 91 23 chr5 10227300 10227388 -192858144 - MIR SINE MIR -80 128 35 525 182 20 0 chr5 10228730 10228829 -192856703 + MLT2C1 LTR ERVL 4 104 -293 1272 209 147 34 chr5 10228834 10229241 -192856291 + MLT1C LTR MaLR 6 458 -9 200 282 55 55 chr5 10229297 10229407 -192856125 + MIR SINE MIR 14 123 -139 192 135 0 0 chr5 10229719 10229756 -192855776 + (CAAAAA)n Simple_repeat Simple_repeat 6 42 0 1261 159 25 107 chr5 10229925 10230252 -192855280 + AluYb8 SINE Alu 1 300 -18 21 0 0 0 chr5 10230260 10230281 -192855251 + AT_rich Low_complexity Low_complexity 1 21 0 866 264 47 12 chr5 10230309 10230653 -192854879 + L1MC4 LINE L1 7687 8042 0 21 0 0 0 chr5 10230667 10230688 -192854844 + AT_rich Low_complexity Low_complexity 1 21 0 256 267 95 95 chr5 10231316 10231537 -192853995 - L2 LINE L2 -38 3234 3014 390 312 40 40 chr5 10232369 10232542 -192852990 + MER5B DNA MER1_type 1 173 -5 676 228 17 6 chr5 10232580 10232760 -192852772 - MER5A DNA MER1_type -4 185 4 185 195 0 24 chr5 10233863 10233904 -192851628 + L2 LINE L2 128 167 -3147 378 162 0 0 chr5 10234486 10234554 -192850978 - L1MD3 LINE L1 0 7995 7928 1937 206 63 20 chr5 10234638 10234820 -192850712 - L1MD3 LINE L1 -70 7925 7752 1305 199 15 103 chr5 10234820 10235218 -192850314 - MLT1A1 LTR MaLR -2 363 1 1937 206 63 20 chr5 10235218 10235524 -192850008 - L1MD3 LINE L1 -243 7752 7416 320 193 0 60 chr5 10235524 10235607 -192849925 - MLT1F1 LTR MaLR -435 132 55 213 20 0 102 chr5 10238165 10238214 -192847318 + (CAAA)n Simple_repeat Simple_repeat 2 45 0 261 327 26 9 chr5 10238294 10238407 -192847125 - MIR3 SINE MIR -4 204 90 1968 114 3 20 chr5 10238818 10239116 -192846416 + AluSx SINE Alu 1 293 -19 869 148 49 12 chr5 10239179 10239341 -192846191 - FRAM SINE Alu -11 165 1 320 331 79 16 chr5 10239981 10240108 -192845424 + MIR3 SINE MIR 66 200 -8 1258 232 30 46 chr5 10240465 10240835 -192844697 + MLT1A1 LTR MaLR 1 364 -1 345 259 22 45 chr5 10240873 10240995 -192844537 + MIR3 SINE MIR 66 187 -21 1102 308 139 35 chr5 10241654 10242923 -192842609 + HAL1 LINE L1 753 2153 -354 304 342 40 27 chr5 10243129 10243351 -192842181 + HAL1 LINE L1 2246 2470 -37 231 257 0 0 chr5 10243848 10243949 -192841583 + (CA)n Simple_repeat Simple_repeat 2 102 0 274 196 0 0 chr5 10244761 10244817 -192840715 + L1MC4 LINE L1 6648 6703 -1339 186 189 0 0 chr5 10244825 10244862 -192840670 + (CATATA)n Simple_repeat Simple_repeat 2 38 0 279 239 57 34 chr5 10245160 10245248 -192840284 - MLT1I LTR MaLR -130 279 190 997 238 124 46 chr5 10245979 10246391 -192839141 - MLT1C LTR MaLR -2 465 22 334 263 91 0 chr5 10246554 10246653 -192838879 + MIR SINE MIR 86 193 -69 517 109 42 30 chr5 10246772 10247039 -192838493 + (CA)n Simple_repeat Simple_repeat 1 270 0 233 29 0 29 chr5 10248562 10248597 -192836935 + (TTAA)n Simple_repeat Simple_repeat 1 34 0 298 62 0 0 chr5 10248699 10248747 -192836785 - L1MA7 LINE L1 0 6291 6244 3542 109 35 7 chr5 10248749 10249288 -192836244 + MER41A LTR ERV1 1 554 0 291 119 0 0 chr5 10249288 10249330 -192836202 - L1M2 LINE L1 -604 5687 5646 629 101 10 20 chr5 10249330 10249429 -192836103 + MER4A LTR ERV1 1 98 -566 1890 135 3 33 chr5 10249429 10249785 -192835747 + MER4A LTR ERV1 261 664 0 2029 162 31 0 chr5 10249786 10250144 -192835388 - L1M2 LINE L1 -643 5648 5280 209 224 0 17 chr5 10250173 10250231 -192835301 + T-rich Low_complexity Low_complexity 4 60 0 2069 113 20 0 chr5 10250460 10250752 -192834780 - AluSx SINE Alu -14 298 1 214 196 36 89 chr5 10250909 10250965 -192834567 - MIR3 SINE MIR -20 188 136 483 260 68 56 chr5 10252326 10252406 -192833126 - MER46C DNA MER2_type -5 333 255 1955 164 72 18 chr5 10252406 10252795 -192832737 + MLT2D LTR ERVL 1 410 -4 483 260 68 56 chr5 10252795 10252964 -192832568 - MER46C DNA MER2_type -83 255 81 230 220 40 0 chr5 10253865 10253915 -192831617 + MLT1I LTR MaLR 228 279 -130 1677 191 34 96 chr5 10255003 10255147 -192830385 + MLT1D LTR MaLR 3 154 -351 1695 167 141 26 chr5 10255147 10255531 -192830001 - MSTA LTR MaLR 0 428 1 1677 191 34 96 chr5 10255531 10255916 -192829616 + MLT1D LTR MaLR 154 499 -6 203 246 271 16 chr5 10256203 10256325 -192829207 - L2 LINE L2 -3 3269 3117 824 265 28 14 chr5 10256557 10256772 -192828760 - MIR SINE MIR -44 218 1 719 187 99 33 chr5 10256933 10257115 -192828417 - MER3 DNA MER1_type -5 204 11 2404 118 24 21 chr5 10257280 10257654 -192827878 - THE1C LTR MaLR 0 375 1 182 348 0 0 chr5 10258449 10258495 -192827037 - L2 LINE L2 -17 3255 3210 1608 240 49 3 chr5 10258544 10258911 -192826621 - LTR39 LTR ERV1 0 783 400 365 98 43 174 chr5 10258911 10259003 -192826529 - MADE1 DNA Mariner 0 80 1 * 2271 179 33 0 chr5 10259003 10259391 -192826141 - LTR39 LTR ERV1 -382 401 1 2703 3 0 13 chr5 10259579 10259891 -192825641 - AluYa5 SINE Alu -3 308 1 322 303 79 20 chr5 10260137 10260289 -192825243 + MIR SINE MIR 90 250 -12 351 0 0 0 chr5 10260290 10260329 -192825203 + (CAT)n Simple_repeat Simple_repeat 1 39 0 823 269 83 74 chr5 10260347 10260804 -192824728 + LTR16B LTR ERVL 1 461 -3 212 0 36 0 chr5 10261425 10261453 -192824079 + (CAA)n Simple_repeat Simple_repeat 2 30 0 315 150 0 0 chr5 10261983 10262043 -192823489 + (CAT)n Simple_repeat Simple_repeat 3 62 0 2300 85 0 3 chr5 10262645 10262950 -192822582 - AluSc SINE Alu -5 304 1 1274 221 39 13 chr5 10263182 10263490 -192822042 + MLT1C LTR MaLR 1 316 -151 502 272 37 88 chr5 10263543 10263642 -192821890 - L1M4 LINE L1 -2098 4048 3945 189 94 0 0 chr5 10263648 10263680 -192821852 + (TTTAA)n Simple_repeat Simple_repeat 4 35 0 2097 95 3 0 chr5 10263680 10263958 -192821574 - AluSc SINE Alu -27 282 1 502 272 37 88 chr5 10263958 10264130 -192821402 - L1M4 LINE L1 -2201 3945 3791 1765 118 44 36 chr5 10264182 10264707 -192820825 + MER4A LTR ERV1 1 663 -1 562 254 157 14 chr5 10264707 10264985 -192820547 + MLT1G1 LTR MaLR 27 344 -251 680 252 19 0 chr5 10265014 10265173 -192820359 + MLT1G1 LTR MaLR 429 590 -5 463 280 118 40 chr5 10265187 10265712 -192819820 - L1M4 LINE L1 -2385 3761 3196 434 213 0 21 chr5 10265995 10266089 -192819443 + MER94 DNA DNA 1 92 -42 685 319 91 45 chr5 10266120 10266678 -192818854 - L1M4 LINE L1 -3252 2894 2311 410 201 72 86 chr5 10267505 10267644 -192817888 - L2 LINE L2 -24 3289 3153 200 265 193 12 chr5 10268078 10268161 -192817371 - MIR SINE MIR -115 147 50 270 309 90 71 chr5 10270899 10271310 -192814222 + L2 LINE L2 2830 3248 -24 226 284 63 0 chr5 10272933 10273028 -192812504 - MER5A DNA MER1_type -80 109 9 218 317 81 32 chr5 10273074 10273197 -192812335 + MER5A DNA MER1_type 35 163 -26 1579 205 39 55 chr5 10273213 10273598 -192811934 - MLT1B LTR MaLR -11 379 1 321 248 341 0 chr5 10275340 10275469 -192810063 - MIR SINE MIR -30 232 60 1755 153 6 32 chr5 10276205 10276518 -192809014 - AluJo SINE Alu -5 307 3 246 285 58 44 chr5 10276642 10276779 -192808753 + L1MC/D LINE L1 5711 5849 -1959 184 338 38 0 chr5 10276867 10276947 -192808585 + MER5A DNA MER1_type 7 89 -100 221 333 151 34 chr5 10276968 10277319 -192808213 + L2 LINE L2 2092 2483 -831 321 389 65 44 chr5 10277451 10277744 -192807788 + L2 LINE L2 2972 3270 -2 315 0 0 0 chr5 10279890 10279925 -192805607 + (TG)n Simple_repeat Simple_repeat 2 36 0 314 58 39 0 chr5 10280060 10280112 -192805420 + (TTTA)n Simple_repeat Simple_repeat 3 56 0 7326 18 0 0 chr5 10280112 10280933 -192804599 - L1PA2 LINE L1 -16 6139 5319 1181 255 56 36 chr5 10280933 10281325 -192804207 + MLT1C LTR MaLR 68 467 0 675 230 49 97 chr5 10283112 10283460 -192802072 - MLT1J LTR MaLR -64 447 81 309 190 88 36 chr5 10283497 10283634 -192801898 + (CAGAGA)n Simple_repeat Simple_repeat 6 149 0 1450 191 50 0 chr5 10286172 10286450 -192799082 - Tigger3b DNA MER2_type 0 1232 941 1414 60 5 0 chr5 10286450 10286634 -192798898 - L1PA8A LINE L1 -266 5865 5681 554 77 0 0 chr5 10286634 10286704 -192798828 + L1PA8 LINE L1 6094 6171 -1 4816 113 39 95 chr5 10286705 10287707 -192797825 - Tigger3b DNA MER2_type -284 947 2 1712 188 58 80 chr5 10288161 10288677 -192796855 + MLT1D LTR MaLR 1 505 0 383 360 77 31 chr5 10290098 10290618 -192794914 + L2 LINE L2 724 1267 -2047 219 210 43 70 chr5 10290773 10290845 -192794687 - MER5B DNA MER1_type -56 128 61 237 239 0 14 chr5 10290882 10290953 -192794579 - MLT1B LTR MaLR 0 390 321 590 119 0 12 chr5 10290954 10291038 -192794494 - AluS SINE Alu -229 84 2 633 248 135 66 chr5 10291041 10291431 -192794101 - MLT1D LTR MaLR -59 408 1 1496 293 119 21 chr5 10291432 10292477 -192793055 - L1ME3A LINE L1 -28 6142 4964 282 269 141 60 chr5 10295333 10295482 -192790050 - MIR3 SINE MIR -15 193 33 1190 229 28 76 chr5 10295917 10296388 -192789144 + MLT1C LTR MaLR 3 450 -17 472 111 0 0 chr5 10296840 10296903 -192788629 - AluSc SINE Alu -92 217 155 254 86 0 0 chr5 10296903 10296938 -192788594 + 5S rRNA rRNA 62 96 -25 182 289 41 66 chr5 10297554 10297675 -192787857 - L2 LINE L2 -815 2499 2382 326 195 13 0 chr5 10297965 10298042 -192787490 + CT-rich Low_complexity Low_complexity 1 78 0 255 61 0 0 chr5 10298050 10298083 -192787449 + (TCCA)n Simple_repeat Simple_repeat 1 33 0 477 241 85 51 chr5 10299301 10299498 -192786034 - MIR SINE MIR -39 223 15 471 188 6 0 chr5 10300579 10300672 -192784860 - Tigger4(Zombi) DNA MER2_type -2634 97 1 826 78 93 16 chr5 10302240 10302369 -192783163 - MER85 DNA T2_type 0 139 1 2040 142 7 3 chr5 10302505 10302814 -192782718 + AluSg SINE Alu 1 310 0 326 275 167 0 chr5 10302823 10302943 -192782589 + L1ME4a LINE L1 5775 5914 -207 224 320 70 0 chr5 10303499 10303599 -192781933 + L2 LINE L2 2346 2452 -862 327 315 12 85 chr5 10303615 10303961 -192781571 - MLT1I LTR MaLR -17 392 98 306 145 126 58 chr5 10304018 10304132 -192781400 + MER34 LTR ERV1 433 536 -6 1827 186 0 3 chr5 10304345 10304646 -192780886 - AluJb SINE Alu -7 305 6 1138 248 42 45 chr5 10304650 10305097 -192780435 - MLT1D LTR MaLR -59 446 1 286 330 134 0 chr5 10305262 10305456 -192780076 + MIR SINE MIR 22 241 -21 259 253 40 80 chr5 10306644 10306693 -192778839 + Charlie4 DNA MER1_type 1818 1867 -94 2334 102 0 3 chr5 10306693 10306996 -192778536 - AluSx SINE Alu -10 302 1 259 253 40 80 chr5 10306996 10307096 -192778436 + Charlie4 DNA MER1_type 1867 1961 0 264 59 0 0 chr5 10307568 10307602 -192777930 + (TG)n Simple_repeat Simple_repeat 2 35 0 268 353 0 0 chr5 10307619 10307735 -192777797 + (TG)n Simple_repeat Simple_repeat 1 116 0 256 306 0 14 chr5 10308073 10308145 -192777387 - L2 LINE L2 -2 3270 3200 338 142 125 2 chr5 10308825 10308919 -192776613 + MLT1G LTR MaLR 13 156 -393 532 231 75 0 chr5 10310224 10310358 -192775174 - MER58B DNA MER1_type -1 340 197 360 217 179 0 chr5 10311327 10311433 -192774099 - LTR40a LTR ERVL 0 519 395 473 124 16 141 chr5 10311513 10311634 -192773898 - MER20 DNA MER1_type -5 214 109 1546 178 3 51 chr5 10312699 10313019 -192772513 + AluJo SINE Alu 7 312 0 1898 177 138 5 chr5 10313103 10313481 -192772051 - MSTA LTR MaLR 0 428 1 9230 154 22 54 chr5 10313481 10315186 -192770346 - MSTA-int LTR MaLR 0 1651 1 1968 139 121 67 chr5 10315186 10315590 -192769942 - MSTA LTR MaLR 0 428 3 273 214 135 11 chr5 10315941 10316030 -192769502 - LTR16C LTR ERVL -3 488 389 216 0 0 0 chr5 10319073 10319097 -192766435 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 867 246 65 35 chr5 10319136 10319506 -192766026 - LTR37A LTR ERV1 -7 419 39 201 267 19 95 chr5 10319894 10319999 -192765533 + MIR3 SINE MIR 74 170 -38 477 278 237 0 chr5 10321426 10321620 -192763912 + MIR SINE MIR 13 252 -10 752 276 24 42 chr5 10322716 10323049 -192762483 - LTR16B LTR ERVL -137 327 1 1962 109 0 4 chr5 10324360 10324627 -192760905 - AluSx SINE Alu -46 266 1 188 238 64 87 chr5 10325798 10325970 -192759562 - MER5C DNA MER1_type -136 188 21 275 295 98 8 chr5 10326559 10326681 -192758851 - MIR SINE MIR -4 258 126 480 193 283 0 chr5 10327196 10327341 -192758191 - MER53 DNA DNA 0 189 4 261 0 0 0 chr5 10327599 10327628 -192757904 + (TTCA)n Simple_repeat Simple_repeat 4 32 0 2046 189 23 25 chr5 10327654 10328087 -192757445 + Tigger2a DNA MER2_type 3 434 0 946 189 99 128 chr5 10328166 10328448 -192757084 + MLT1C LTR MaLR 37 303 -164 2051 107 0 4 chr5 10328448 10328718 -192756814 + AluSq SINE Alu 1 269 -44 946 189 99 128 chr5 10328718 10328879 -192756653 + MLT1C LTR MaLR 303 467 0 459 209 55 0 chr5 10330000 10330110 -192755422 - L1MA9 LINE L1 -385 5927 5812 776 154 83 6 chr5 10330111 10330140 -192755392 + L1MA9 LINE L1 6122 6147 -165 324 0 0 0 chr5 10330140 10330176 -192755356 + (CA)n Simple_repeat Simple_repeat 1 36 0 189 0 0 0 chr5 10330175 10330196 -192755336 + (GA)n Simple_repeat Simple_repeat 2 22 0 * 776 154 83 6 chr5 10330176 10330335 -192755197 + L1MA9 LINE L1 6147 6303 -9 780 272 27 5 chr5 10331879 10332103 -192753429 + MLT1C LTR MaLR 239 467 0 180 358 15 0 chr5 10332542 10332609 -192752923 + L2 LINE L2 3246 3313 0 270 179 0 0 chr5 10334467 10334523 -192751009 + GA-rich Low_complexity Low_complexity 3 58 0 2314 107 3 3 chr5 10335824 10336133 -192749399 + AluSx SINE Alu 1 309 -3 1682 174 102 6 chr5 10336179 10336512 -192749020 + MLT1A1 LTR MaLR 1 365 0 251 228 0 0 chr5 10337652 10337709 -192747823 + T-rich Low_complexity Low_complexity 1 57 0 1133 224 82 55 chr5 10338112 10338492 -192747040 - MLT1B LTR MaLR 0 390 1 23 0 0 0 chr5 10341489 10341512 -192744020 + AT_rich Low_complexity Low_complexity 1 23 0 278 258 251 26 chr5 10341603 10341874 -192743658 + L1MC3 LINE L1 5574 5905 -1903 279 351 11 0 chr5 10342076 10342170 -192743362 + MIR SINE MIR 158 252 -10 2047 105 3 20 chr5 10342276 10342571 -192742961 + AluSx SINE Alu 9 298 -14 588 204 0 0 chr5 10343304 10343417 -192742115 + L1MC3 LINE L1 6739 6851 -934 41 21 0 0 chr5 10343434 10343482 -192742050 + AT_rich Low_complexity Low_complexity 1 48 0 936 172 15 25 chr5 10343548 10343752 -192741780 + L1MC3 LINE L1 6893 7094 -691 403 228 54 0 chr5 10343755 10343847 -192741685 + MLT1F1 LTR MaLR 35 131 -436 2630 214 28 7 chr5 10343848 10344418 -192741114 + L1MC3 LINE L1 7202 7783 -2 1866 121 0 4 chr5 10344483 10344740 -192740792 - AluSg SINE Alu -13 297 42 712 218 155 35 chr5 10344740 10345046 -192740486 - Zaphod DNA AcHobo -756 3275 2928 1282 246 53 40 chr5 10345166 10345249 -192740283 - Zaphod DNA AcHobo -1529 2502 2422 957 163 0 27 chr5 10345249 10345433 -192740099 - L1MA9 LINE L1 0 6312 6134 1282 246 53 40 chr5 10345433 10345541 -192739991 - Zaphod DNA AcHobo -1609 2422 2317 2478 91 0 0 chr5 10345541 10345850 -192739682 - AluY SINE Alu -2 309 1 1282 246 53 40 chr5 10345850 10346162 -192739370 - Zaphod DNA AcHobo -1714 2317 1991 234 233 33 0 chr5 10346212 10346272 -192739260 - Zaphod DNA AcHobo -2049 1982 1921 3982 233 66 32 chr5 10346436 10349117 -192736415 - L1MCa LINE L1 -3158 3406 569 1413 203 52 0 chr5 10349291 10349562 -192735970 - L1PB4 LINE L1 -3 6153 5869 766 295 48 63 chr5 10349574 10349987 -192735545 - L1MCa LINE L1 -5638 407 1 476 186 8 0 chr5 10350084 10350202 -192735330 + CT-rich Low_complexity Low_complexity 2 120 0 521 256 32 78 chr5 10350876 10351220 -192734312 - L1MEd LINE L1 -4884 1235 908 234 128 0 0 chr5 10351278 10351317 -192734215 + (TG)n Simple_repeat Simple_repeat 2 40 0 303 143 0 0 chr5 10351481 10351530 -192734002 - L1PA12 LINE L1 0 6168 6120 * 1797 71 0 8 chr5 10351509 10351748 -192733784 + L1PA6 LINE L1 5706 5942 -212 235 308 19 28 chr5 10351777 10351884 -192733648 - MIR SINE MIR -60 202 97 2948 6 0 0 chr5 10351915 10352226 -192733306 + AluYa5 SINE Alu 1 311 0 300 349 88 51 chr5 10352980 10353748 -192731784 - L1MEd LINE L1 -5275 844 48 189 0 0 0 chr5 10355883 10355904 -192729628 + (T)n Simple_repeat Simple_repeat 1 21 0 2107 231 28 36 chr5 10357405 10358065 -192727467 - L1MD3 LINE L1 -34 7948 7108 315 300 0 0 chr5 10358065 10358155 -192727377 + L1MC4 LINE L1 6614 6703 -1339 260 150 0 0 chr5 10358174 10358214 -192727318 - Alu SINE Alu -10 291 252 795 231 36 12 chr5 10358299 10358546 -192726986 - L1 LINE L1 -2118 4028 3776 2401 112 0 0 chr5 10358546 10358858 -192726674 - AluSx SINE Alu 0 312 1 1415 170 30 102 chr5 10358859 10359253 -192726279 - L1MD3 LINE L1 -826 7169 6804 377 223 158 7 chr5 10360877 10361016 -192724516 + LTR33 LTR ERVL 293 452 -69 28 61 0 0 chr5 10361080 10361129 -192724403 + AT_rich Low_complexity Low_complexity 1 49 0 1932 265 34 27 chr5 10361180 10361804 -192723728 - MLT1E3 LTR MaLR -4 620 5 184 121 61 0 chr5 10363259 10363292 -192722240 + L3b LINE CR1 1436 1470 -113 878 269 137 28 chr5 10364352 10364635 -192720897 - LTR16A LTR ERVL -3 447 108 2675 91 8 0 chr5 10364635 10364987 -192720545 - THE1A LTR MaLR 0 355 1 878 269 137 28 chr5 10364987 10365097 -192720435 - LTR16A LTR ERVL -342 108 11 414 294 85 28 chr5 10365219 10365430 -192720102 + MER112 DNA MER1_type 17 239 -21 * 3548 139 55 3 chr5 10365401 10365969 -192719563 + MER50 LTR ERV1 115 711 -23 216 0 0 0 chr5 10367410 10367434 -192718098 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 971 241 65 32 chr5 10367473 10367842 -192717690 - LTR37A LTR ERV1 -7 419 39 361 272 148 0 chr5 10369749 10369911 -192715621 + MIR SINE MIR 13 198 -64 1429 279 33 4 chr5 10370806 10371257 -192714275 - LTR16B LTR ERVL 0 464 1 195 303 156 9 chr5 10371618 10371727 -192713805 + L2 LINE L2 3179 3303 -10 2025 170 29 24 chr5 10372441 10372537 -192712995 - MSTA LTR MaLR 0 428 334 2696 108 11 0 chr5 10372537 10372908 -192712624 - THE1C LTR MaLR 0 375 1 2025 170 29 24 chr5 10372908 10373039 -192712493 - MSTA LTR MaLR -94 334 205 2073 126 7 10 chr5 10373039 10373341 -192712191 - AluSx SINE Alu -11 301 1 2025 170 29 24 chr5 10373341 10373494 -192712038 - MSTA LTR MaLR -223 205 45 2606 193 14 60 chr5 10373648 10374228 -192711304 - MER68 LTR ERV1 -8 554 2 258 271 94 12 chr5 10374474 10374559 -192710973 - L1ME LINE L1 -548 5573 5482 207 0 0 0 chr5 10374968 10374991 -192710541 + (T)n Simple_repeat Simple_repeat 1 23 0 2071 178 35 0 chr5 10375374 10375751 -192709781 + MLT1B LTR MaLR 1 390 0 423 56 42 0 chr5 10375906 10375977 -192709555 + (TTGTG)n Simple_repeat Simple_repeat 1 74 0 356 309 15 7 chr5 10376460 10376596 -192708936 + MER5A DNA MER1_type 50 186 -3 339 177 46 0 chr5 10376771 10376901 -192708631 + (TG)n Simple_repeat Simple_repeat 2 137 0 240 278 28 0 chr5 10376926 10376998 -192708534 + (TG)n Simple_repeat Simple_repeat 1 74 0 209 330 35 52 chr5 10378169 10378284 -192707248 - L2 LINE L2 -43 3229 3117 218 335 47 43 chr5 10378389 10378667 -192706865 - L2 LINE L2 -805 2509 2231 552 265 163 30 chr5 10378779 10379111 -192706421 - L2 LINE L2 -570 2744 2369 2428 130 11 3 chr5 10379135 10379496 -192706036 - THE1B LTR MaLR 0 364 1 272 200 12 0 chr5 10381105 10381185 -192704347 + CT-rich Low_complexity Low_complexity 3 83 0 383 233 39 10 chr5 10383182 10383285 -192702247 + MLT1J LTR MaLR 103 208 -303 535 299 99 5 chr5 10383537 10383748 -192701784 - MIR SINE MIR -7 255 25 290 192 0 0 chr5 10385148 10385200 -192700332 - L1MA8 LINE L1 -23 6268 6217 836 166 31 6 chr5 10385256 10385419 -192700113 - L1MA6 LINE L1 -197 6103 5937 * 1642 152 4 0 chr5 10385418 10385681 -192699851 + L1MA8 LINE L1 5636 5899 -392 5522 175 31 32 chr5 10387115 10387335 -192698197 + L1MC1 LINE L1 5160 5379 -954 2152 104 21 0 chr5 10387335 10387623 -192697909 + AluSx SINE Alu 1 294 -18 5522 175 31 32 chr5 10387623 10388574 -192696958 + L1MC1 LINE L1 5379 6333 0 237 186 0 0 chr5 10388911 10388954 -192696578 - L1M4 LINE L1 -940 5206 5164 180 0 0 0 chr5 10388954 10388974 -192696558 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 254 318 57 0 chr5 10389259 10389347 -192696185 - MIR SINE MIR -73 189 97 480 154 82 27 chr5 10389504 10389614 -192695918 - MER95 LTR ERV 0 431 316 304 300 40 50 chr5 10390107 10390307 -192695225 - L3 LINE CR1 -87 1490 1293 539 41 27 0 chr5 10390373 10390446 -192695086 + (TTTTC)n Simple_repeat Simple_repeat 2 76 0 180 111 0 0 chr5 10391146 10391173 -192694359 + (TATATG)n Simple_repeat Simple_repeat 4 30 0 414 0 0 0 chr5 10391174 10391220 -192694312 + (TAGA)n Simple_repeat Simple_repeat 1 46 0 1301 194 127 12 chr5 10392872 10393218 -192692314 - MLT1C LTR MaLR 0 467 82 282 161 148 37 chr5 10393345 10393426 -192692106 - MLT1C LTR MaLR -375 92 3 947 161 7 13 chr5 10393838 10393993 -192691539 - AluSq SINE Alu -159 154 1 2817 216 112 111 chr5 10394004 10394032 -192691500 - Zaphod DNA AcHobo -1692 2339 2313 1797 107 122 0 chr5 10394032 10394295 -192691237 - AluSq SINE Alu -18 295 1 2817 216 112 111 chr5 10394295 10395682 -192689850 - Zaphod DNA AcHobo -1718 2313 928 1699 122 122 0 chr5 10395682 10395944 -192689588 + AluSq SINE Alu 1 294 -19 2817 216 112 111 chr5 10395944 10395983 -192689549 - Zaphod DNA AcHobo -3103 928 891 2025 134 10 7 chr5 10395983 10396275 -192689257 + AluSq SINE Alu 1 293 -20 2817 216 112 111 chr5 10396275 10396520 -192689012 - Zaphod DNA AcHobo -3140 891 637 548 254 18 47 chr5 10396642 10396811 -192688721 - Zaphod DNA AcHobo -3795 236 73 271 302 65 30 chr5 10396967 10397136 -192688396 + L1ME3A LINE L1 5749 5923 -247 259 273 27 82 chr5 10397248 10397431 -192688101 + L1ME3A LINE L1 5989 6161 -9 190 30 152 0 chr5 10397495 10397528 -192688004 - L2 LINE L2 -2 3311 3274 2002 138 7 0 chr5 10397557 10397848 -192687684 + AluY SINE Alu 1 293 -18 2162 183 54 31 chr5 10397964 10398445 -192687087 - LTR22B LTR ERVK 0 492 1 197 211 19 0 chr5 10400314 10400366 -192685166 + GA-rich Low_complexity Low_complexity 1 53 0 263 296 0 12 chr5 10400367 10400382 -192685150 + G-rich Low_complexity Low_complexity 2 16 -65 1800 193 19 43 chr5 10400382 10400756 -192684776 - MLT1A1 LTR MaLR 0 365 1 263 296 0 12 chr5 10400756 10400821 -192684711 + G-rich Low_complexity Low_complexity 16 81 0 24 0 0 0 chr5 10400978 10401002 -192684530 + AT_rich Low_complexity Low_complexity 1 24 0 722 262 103 11 chr5 10401250 10401624 -192683908 - L1M4 LINE L1 -1484 4662 4250 1014 194 55 27 chr5 10404584 10404913 -192680619 + L1MC2 LINE L1 4979 5316 -830 * 5192 166 19 22 chr5 10404908 10406099 -192679433 - L1PA16 LINE L1 -12 6154 4975 2877 201 24 39 chr5 10406101 10406771 -192678761 + L1MC2 LINE L1 5304 5963 -381 386 340 42 50 chr5 10407378 10407640 -192677892 - L2 LINE L2 -1907 1407 1148 2304 109 7 0 chr5 10407654 10407958 -192677574 + AluSg SINE Alu 1 306 -4 1910 181 3 0 chr5 10407976 10408285 -192677247 + AluSx SINE Alu 1 310 -2 1204 275 44 6 chr5 10408396 10408716 -192676816 + LTR16A LTR ERVL 116 447 -3 1200 293 84 42 chr5 10408722 10409565 -192675967 + L2 LINE L2 2201 3091 -222 2244 116 0 0 chr5 10409565 10409868 -192675664 + AluSq SINE Alu 11 313 0 1200 293 84 42 chr5 10409868 10410101 -192675431 + L2 LINE L2 3091 3313 0 818 163 43 22 chr5 10410327 10410511 -192675021 - MER53 DNA DNA 0 189 2 512 307 88 47 chr5 10410894 10411317 -192674215 + LTR33 LTR ERVL 5 444 -77 3080 169 78 31 chr5 10411318 10411541 -192673991 + MER7C DNA MER2_type 1 212 -2816 188 67 33 0 chr5 10411541 10411571 -192673961 + (CTCA)n Simple_repeat Simple_repeat 4 34 0 3080 169 78 31 chr5 10411571 10411922 -192673610 + MER7C DNA MER2_type 212 602 0 2470 124 3 0 chr5 10412615 10412962 -192672570 - L1PA13 LINE L1 -14 6149 5802 21 57 0 0 chr5 10414325 10414360 -192671172 + AT_rich Low_complexity Low_complexity 1 35 0 33 56 0 0 chr5 10414391 10414445 -192671087 + AT_rich Low_complexity Low_complexity 1 54 0 1627 90 36 0 chr5 10414578 10414800 -192670732 + L1PA10 LINE L1 5935 6164 -4 36 53 0 0 chr5 10414929 10414986 -192670546 + AT_rich Low_complexity Low_complexity 1 57 0 270 285 51 15 chr5 10415119 10415256 -192670276 - MIR SINE MIR -40 222 81 345 24 0 0 chr5 10415271 10415313 -192670219 + (TG)n Simple_repeat Simple_repeat 2 43 0 1369 214 206 3 chr5 10415316 10415694 -192669838 - MLT2B2 LTR ERVL -60 455 1 235 296 0 35 chr5 10415811 10415926 -192669606 + (CATATA)n Simple_repeat Simple_repeat 2 112 0 * 274 275 58 7 chr5 10415867 10416005 -192669527 + (TAGA)n Simple_repeat Simple_repeat 2 146 0 1798 138 64 3 chr5 10416244 10416527 -192669005 - AluJb SINE Alu -12 300 1 12608 176 22 8 chr5 10417809 10419529 -192666003 - L1PB3 LINE L1 0 6154 4460 230 29 59 0 chr5 10419529 10419563 -192665969 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 12608 176 22 8 chr5 10419563 10419968 -192665564 - L1PB3 LINE L1 -1694 4460 4062 1962 138 10 3 chr5 10419968 10420264 -192665268 - AluSg SINE Alu -12 298 1 12608 176 22 8 chr5 10420264 10421609 -192663923 - L1PB3 LINE L1 -2092 4062 2633 1164 221 31 7 chr5 10421881 10422186 -192663346 - L1MB5 LINE L1 0 6180 5867 1114 219 16 27 chr5 10422185 10422441 -192663091 + L1MB5 LINE L1 5625 5877 -297 * 24 0 0 0 chr5 10422824 10422848 -192662684 + AT_rich Low_complexity Low_complexity 1 24 0 254 250 7 0 chr5 10424125 10424277 -192661255 + (CA)n Simple_repeat Simple_repeat 2 154 0 323 118 20 0 chr5 10424962 10425013 -192660519 - MLT1A1 LTR MaLR -313 52 1 298 294 28 18 chr5 10425107 10425216 -192660316 + MER94 DNA DNA 3 112 -22 1609 135 54 0 chr5 10425312 10425571 -192659961 - AluSx SINE Alu 0 312 40 21 36 0 0 chr5 10426506 10426534 -192658998 + AT_rich Low_complexity Low_complexity 1 28 0 1664 184 23 26 chr5 10428727 10429037 -192656495 + AluJo SINE Alu 1 309 -3 201 178 22 0 chr5 10429641 10429686 -192655846 + L2 LINE L2 3268 3313 0 306 0 0 0 chr5 10431439 10431473 -192654059 + (CA)n Simple_repeat Simple_repeat 1 34 0 23 0 0 0 chr5 10432023 10432046 -192653486 + AT_rich Low_complexity Low_complexity 1 23 0 229 297 33 11 chr5 10432419 10432510 -192653022 - MLT1H LTR MaLR 0 549 457 2235 206 11 31 chr5 10434304 10434751 -192650781 + MLT2B3 LTR ERVL 9 446 -108 426 265 54 20 chr5 10435795 10435942 -192649590 + LTR33 LTR ERVL 316 467 -54 1817 157 10 3 chr5 10435964 10436269 -192649263 - AluSx SINE Alu -1 311 5 1529 93 29 0 chr5 10437018 10437223 -192648309 + AluSc SINE Alu 93 303 -6 274 290 20 60 chr5 10437266 10437366 -192648166 - MIR SINE MIR -73 135 40 320 313 106 28 chr5 10438003 10438148 -192647384 + L2 LINE L2 1548 1717 -1597 2228 115 0 16 chr5 10438148 10438462 -192647070 + AluSx SINE Alu 1 309 -3 320 313 106 28 chr5 10438462 10438533 -192646999 + L2 LINE L2 1717 1781 -1533 665 272 123 6 chr5 10438578 10438894 -192646638 + L2 LINE L2 2073 2425 -889 192 237 17 0 chr5 10438910 10438969 -192646563 + L2 LINE L2 2366 2425 -889 422 301 35 12 chr5 10439218 10439391 -192646141 + L2 LINE L2 2366 2542 -772 1334 186 54 11 chr5 10439396 10439675 -192645857 - MER2 DNA MER2_type -7 338 48 441 50 0 0 chr5 10440199 10440259 -192645273 + (TG)n Simple_repeat Simple_repeat 1 60 0 317 161 345 0 chr5 10440328 10440415 -192645117 - L2 LINE L2 -4 3309 3193 392 118 15 0 chr5 10440491 10440559 -192644973 + (TAGA)n Simple_repeat Simple_repeat 4 72 0 1490 208 83 38 chr5 10440942 10441385 -192644147 + MLT1C LTR MaLR 5 467 0 347 153 56 14 chr5 10441530 10441602 -192643930 + MIR SINE MIR 98 172 -90 208 107 0 0 chr5 10441600 10441628 -192643904 - MIR SINE MIR -218 44 17 * 1680 196 32 27 chr5 10444342 10444714 -192640818 + MLT2D LTR ERVL 1 374 -40 305 179 45 0 chr5 10444786 10444853 -192640679 + MLT2D LTR ERVL 451 520 0 2164 126 0 0 chr5 10446616 10446909 -192638623 - AluSx SINE Alu -14 298 6 21 0 0 0 chr5 10447340 10447361 -192638171 + AT_rich Low_complexity Low_complexity 1 21 0 1101 231 43 61 chr5 10447410 10447786 -192637746 + MLT1A2 LTR MaLR 2 370 -4 23 0 0 0 chr5 10448006 10448029 -192637503 + AT_rich Low_complexity Low_complexity 1 23 0 1683 156 33 77 chr5 10448842 10448860 -192636672 - MER93b LTR ERV1 0 373 356 1994 134 13 29 chr5 10448860 10449167 -192636365 + AluSx SINE Alu 1 302 -10 1683 156 33 77 chr5 10449167 10449538 -192635994 - MER93b LTR ERV1 -17 356 1 634 300 77 13 chr5 10449547 10449780 -192635752 - MIR SINE MIR -1 261 14 1397 224 43 19 chr5 10450626 10451042 -192634490 + MLT1C LTR MaLR 1 426 -41 267 333 90 9 chr5 10451682 10451821 -192633711 + MIR SINE MIR 17 166 -63 1230 157 101 173 chr5 10455666 10455947 -192629585 - MLT1C LTR MaLR 0 467 236 2233 112 3 0 chr5 10455947 10456250 -192629282 + AluSx SINE Alu 5 308 -4 1230 157 101 173 chr5 10456250 10456471 -192629061 - MLT1C LTR MaLR -231 236 1 299 271 51 25 chr5 10457129 10457247 -192628285 + MIR SINE MIR 16 136 -72 207 288 25 76 chr5 10458675 10458793 -192626739 - MIR SINE MIR -42 220 109 1949 159 21 40 chr5 10458980 10459352 -192626180 - MLT1A1 LTR MaLR 0 365 1 1947 198 15 69 chr5 10459377 10459842 -192625690 - MLT1A1-int LTR MaLR -42 1693 1254 * 2504 253 73 63 chr5 10459809 10459969 -192625563 - MLT1A1-int LTR MaLR -630 1105 948 2794 175 26 72 chr5 10459969 10460610 -192624922 + LTR9 LTR ERV1 1 612 0 2504 253 73 63 chr5 10460610 10461374 -192624158 - MLT1A1-int LTR MaLR -787 948 171 993 218 27 46 chr5 10461395 10461656 -192623876 + MLT1A1 LTR MaLR 1 256 -109 536 205 0 17 chr5 10461656 10461773 -192623759 - L1PA15 LINE L1 0 6165 6051 567 186 18 0 chr5 10461875 10461988 -192623544 - L1PA15 LINE L1 -549 5619 5505 427 240 0 56 chr5 10461989 10462114 -192623418 + MLT1A1 LTR MaLR 246 363 -2 364 269 0 21 chr5 10462116 10462209 -192623323 - MLT1A1 LTR MaLR -272 93 3 22 0 0 0 chr5 10463766 10463788 -192621744 + AT_rich Low_complexity Low_complexity 1 22 0 243 0 0 0 chr5 10463853 10463880 -192621652 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 949 93 29 88 chr5 10463880 10464085 -192621447 - L1PA10 LINE L1 -13 6155 5963 937 179 72 9 chr5 10464195 10464418 -192621114 + L1MC2 LINE L1 6099 6335 -9 2115 137 7 0 chr5 10465613 10465919 -192619613 - AluSx SINE Alu -4 308 1 2208 150 6 107 chr5 10466492 10466749 -192618783 - MER41C LTR ERV1 -1 634 352 2165 142 129 5 chr5 10466749 10467130 -192618402 + MSTA LTR MaLR 1 428 0 2208 150 6 107 chr5 10467130 10467488 -192618044 - MER41C LTR ERV1 -283 352 1 1322 209 81 60 chr5 10468005 10468387 -192617145 + MLT1B LTR MaLR 1 390 0 22 35 0 0 chr5 10470231 10470260 -192615272 + AT_rich Low_complexity Low_complexity 1 29 0 2602 108 5 24 chr5 10472027 10472398 -192613134 + THE1B LTR MaLR 1 364 0 351 0 0 0 chr5 10472958 10472997 -192612535 + (TGAA)n Simple_repeat Simple_repeat 3 41 0 861 255 180 19 chr5 10476316 10476688 -192608844 + MLT1H LTR MaLR 1 432 -117 251 293 19 24 chr5 10476690 10476799 -192608733 - MIR SINE MIR -94 114 4 264 77 0 0 chr5 10476960 10476999 -192608533 + (TC)n Simple_repeat Simple_repeat 1 39 0 1688 172 14 24 chr5 10477664 10477961 -192607571 + AluJb SINE Alu 5 298 -14 274 325 73 24 chr5 10477967 10478090 -192607442 - MIR SINE MIR -74 188 60 1977 63 35 3 chr5 10478557 10478842 -192606690 + L1PA10 LINE L1 5731 6024 -144 1745 122 0 0 chr5 10478948 10479203 -192606329 + L1PA13 LINE L1 5907 6161 -2 339 250 88 56 chr5 10479223 10479383 -192606149 - L1MC/D LINE L1 -2341 5467 5303 435 236 0 0 chr5 10479476 10479565 -192605967 + MER58A DNA MER1_type 1 89 -18 2198 134 7 0 chr5 10480016 10480323 -192605209 + AluSx SINE Alu 1 309 -3 647 270 23 0 chr5 10481315 10481489 -192604043 - MER5B DNA MER1_type 0 178 1 310 252 61 30 chr5 10481691 10481822 -192603710 - MIR SINE MIR -100 162 28 2321 108 0 0 chr5 10484431 10484736 -192600796 + AluSx SINE Alu 7 311 -1 1964 142 33 0 chr5 10486470 10486772 -192598760 - AluJo SINE Alu 0 312 1 713 235 110 83 chr5 10487406 10487997 -192597535 + MLT1F1 LTR MaLR 1 567 0 21 0 0 0 chr5 10488054 10488075 -192597457 + AT_rich Low_complexity Low_complexity 1 21 0 337 247 41 14 chr5 10488076 10488149 -192597383 + MER21B LTR ERV1 15 89 -774 2886 243 110 8 chr5 10488171 10488937 -192596595 + MER21B LTR ERV1 19 862 -1 459 288 24 90 chr5 10490504 10490757 -192594775 - MIR SINE MIR -10 252 23 237 163 0 0 chr5 10490980 10491023 -192594509 + (TGGA)n Simple_repeat Simple_repeat 1 43 0 654 257 44 79 chr5 10491472 10491787 -192593745 + L2 LINE L2 2979 3282 -31 431 225 163 78 chr5 10491825 10491916 -192593616 + HAL1 LINE L1 1010 1092 -1415 2103 121 0 0 chr5 10491916 10492198 -192593334 + AluSx SINE Alu 1 282 -30 431 225 163 78 chr5 10492198 10492364 -192593168 + HAL1 LINE L1 1092 1289 -1218 592 249 92 18 chr5 10492405 10492634 -192592898 + LTR33 LTR ERVL 4 249 -272 247 219 16 31 chr5 10492995 10493059 -192592473 + LTR33 LTR ERVL 456 518 -3 373 273 74 34 chr5 10493071 10493247 -192592285 + HAL1 LINE L1 1336 1518 -989 549 288 47 56 chr5 10494708 10494962 -192590570 + MIR SINE MIR 3 246 -16 2084 174 16 8 chr5 10495508 10495894 -192589638 - L1MA7 LINE L1 -1 7709 7321 3367 33 5 18 chr5 10495896 10496293 -192589239 + L1PA4 LINE L1 5764 6155 0 6175 147 28 27 chr5 10496296 10497996 -192587536 - L1MA7 LINE L1 -373 7337 5644 377 178 46 36 chr5 10498016 10498407 -192587125 + (TATAA)n Simple_repeat Simple_repeat 1 394 0 8779 216 53 13 chr5 10498536 10500988 -192584544 - L1MA7 LINE L1 -1918 5647 3084 41 0 0 0 chr5 10501012 10501053 -192584479 + AT_rich Low_complexity Low_complexity 1 41 0 439 147 8 9 chr5 10501059 10501168 -192584364 - L1M2 LINE L1 -513 5778 5597 2291 48 4 0 chr5 10501168 10501436 -192584096 - L1PA5 LINE L1 0 6154 5886 517 111 0 0 chr5 10501541 10501613 -192583919 - AluS SINE Alu -8 303 232 2017 158 0 0 chr5 10501656 10501960 -192583572 - AluSx SINE Alu -8 304 1 886 303 27 30 chr5 10502470 10502800 -192582732 - LTR16A LTR ERVL 0 450 122 2183 178 11 13 chr5 10504392 10504768 -192580764 - THE1C LTR MaLR 0 375 1 379 288 65 51 chr5 10505471 10506038 -192579494 + L1ME LINE L1 5257 5856 -265 232 308 0 0 chr5 10506201 10506266 -192579266 + A-rich Low_complexity Low_complexity 1 65 0 297 355 0 0 chr5 10509686 10509793 -192575739 + L3b LINE CR1 1249 1355 -228 3622 201 47 17 chr5 10511066 10511384 -192574148 - L1MB7 LINE L1 -30 6154 5847 1207 144 55 15 chr5 10511384 10511586 -192573946 - MER6B DNA MER2_type 0 210 1 3622 201 47 17 chr5 10511586 10512238 -192573294 - L1MB7 LINE L1 -337 5847 5147 238 214 0 0 chr5 10512272 10512314 -192573218 - MER106B DNA MER1_type 0 1059 1018 581 215 90 42 chr5 10512335 10512479 -192573053 - MER106B DNA MER1_type -908 151 1 215 170 43 0 chr5 10513948 10513995 -192571537 + CT-rich Low_complexity Low_complexity 1 49 0 2099 152 0 0 chr5 10514897 10515200 -192570332 - AluSx SINE Alu -9 303 1 630 78 0 0 chr5 10515508 10515585 -192569947 + MADE1 DNA Mariner 4 80 0 9116 76 26 1 chr5 10516466 10517621 -192567911 + HERVL LTR ERVL 2047 3230 -2424 14144 72 6 17 chr5 10517626 10519448 -192566084 + HERVL LTR ERVL 3503 5304 -350 875 282 109 30 chr5 10519480 10520023 -192565509 - L1MB7 LINE L1 -1741 4405 3820 538 333 143 28 chr5 10520094 10520781 -192564751 - L1MEc LINE L1 -4131 2432 1667 221 29 0 57 chr5 10520793 10520828 -192564704 + (TCTCTG)n Simple_repeat Simple_repeat 4 36 0 214 125 42 0 chr5 10520860 10520908 -192564624 + (TA)n Simple_repeat Simple_repeat 1 50 0 236 330 18 0 chr5 10520908 10521020 -192564512 - L1MEc LINE L1 -4899 1485 1372 1177 227 139 17 chr5 10521870 10522013 -192563519 + MSTD LTR MaLR 2 126 -270 2231 120 3 0 chr5 10522013 10522314 -192563218 + AluSx SINE Alu 1 302 -10 1177 227 139 17 chr5 10522314 10522522 -192563010 + MSTD LTR MaLR 126 396 0 329 271 232 13 chr5 10523249 10523404 -192562128 + MIR SINE MIR 57 245 -17 208 356 0 14 chr5 10523792 10523865 -192561667 - MIR SINE MIR -169 93 22 345 194 0 0 chr5 10524053 10524115 -192561417 + FLAM_A SINE Alu 71 132 -1 36 0 0 0 chr5 10524115 10524151 -192561381 + AT_rich Low_complexity Low_complexity 1 36 0 204 67 0 0 chr5 10524151 10524181 -192561351 + (TAAA)n Simple_repeat Simple_repeat 1 30 0 863 169 0 26 chr5 10524186 10524199 -192561333 + AluJo SINE Alu 123 135 -177 2071 118 35 3 chr5 10524199 10524487 -192561045 + AluSx SINE Alu 1 297 -15 863 169 0 26 chr5 10524487 10524616 -192560916 + AluJo SINE Alu 135 263 -49 249 83 0 0 chr5 10524616 10524652 -192560880 + (CAA)n Simple_repeat Simple_repeat 1 36 0 1385 176 77 35 chr5 10524847 10525159 -192560373 + MLT1A1 LTR MaLR 39 363 -2 648 218 292 9 chr5 10526191 10526786 -192558746 + LTR50 LTR ERVL 9 794 -1 2010 233 45 11 chr5 10526828 10527271 -192558261 + MLT1C LTR MaLR 1 458 -9 348 252 53 30 chr5 10527496 10527627 -192557905 + LTR16A LTR ERVL 233 366 -84 2188 97 3 7 chr5 10528637 10528925 -192556607 - AluSq SINE Alu -13 300 14 25 31 0 0 chr5 10529101 10529133 -192556399 + AT_rich Low_complexity Low_complexity 1 32 0 22 35 0 0 chr5 10530107 10530136 -192555396 + AT_rich Low_complexity Low_complexity 1 29 0 670 211 28 22 chr5 10530587 10530767 -192554765 + L1ME3 LINE L1 4424 4604 -1542 307 233 207 9 chr5 10530787 10530903 -192554629 - L1M4 LINE L1 -1524 4622 4484 442 245 161 10 chr5 10531055 10531247 -192554285 - L1M4 LINE L1 -2846 3300 3080 5502 150 45 15 chr5 10531256 10531518 -192554014 + L1PB1 LINE L1 4883 5136 -1015 2198 107 0 41 chr5 10531518 10531836 -192553696 - AluSg SINE Alu -5 305 1 5502 150 45 15 chr5 10531836 10532738 -192552794 + L1PB1 LINE L1 5136 6150 -1 1620 229 103 63 chr5 10532802 10533552 -192551980 + L1ME3 LINE L1 5298 6077 -85 217 311 54 0 chr5 10533615 10533689 -192551843 + L2 LINE L2 2966 3043 -229 288 141 55 16 chr5 10534369 10534497 -192551035 + (TA)n Simple_repeat Simple_repeat 2 134 0 242 211 37 28 chr5 10534527 10534636 -192550896 + (TA)n Simple_repeat Simple_repeat 1 110 0 1035 235 90 36 chr5 10534770 10535379 -192550153 + MER76 LTR ERV 3 682 -6 245 261 15 15 chr5 10536694 10536759 -192548773 - L2 LINE L2 -5 3267 3203 2513 119 107 20 chr5 10536844 10537238 -192548294 - MSTA LTR MaLR 0 428 1 2682 136 2 5 chr5 10537238 10537643 -192547889 - MSTA-int LTR MaLR 0 1651 1248 14486 154 50 12 chr5 10538054 10544054 -192541478 - L1PB1 LINE L1 -1 6866 634 1098 182 5 0 chr5 10544057 10544249 -192541283 - L1PB1 LINE L1 -6668 195 3 1777 148 14 11 chr5 10544276 10544554 -192540978 - AluSg SINE Alu -18 292 14 2274 102 54 23 chr5 10544884 10545237 -192540295 + THE1B LTR MaLR 1 364 0 11455 103 10 1 chr5 10545237 10546803 -192538729 + THE1B-int LTR MaLR 1 1580 0 2195 108 60 28 chr5 10546803 10547156 -192538376 + THE1B LTR MaLR 1 364 0 182 313 15 0 chr5 10547300 10547367 -192538165 + MIR3 SINE MIR 111 178 -30 285 291 3 11 chr5 10548453 10548554 -192536978 + MIR SINE MIR 20 121 -87 1763 214 63 0 chr5 10549430 10549808 -192535724 - MER57A LTR ERV1 -1 402 1 184 254 9 9 chr5 10550220 10550334 -192535198 + (TG)n Simple_repeat Simple_repeat 1 114 0 325 281 0 15 chr5 10550346 10550481 -192535051 + (TG)n Simple_repeat Simple_repeat 2 134 0 214 167 46 56 chr5 10552111 10552219 -192533313 + (TATAA)n Simple_repeat Simple_repeat 2 108 0 498 104 14 49 chr5 10552223 10552367 -192533165 + (TA)n Simple_repeat Simple_repeat 1 139 0 284 164 0 82 chr5 10553292 10553365 -192532167 - MLT2B1 LTR ERVL 0 520 454 970 243 58 29 chr5 10553379 10553692 -192531840 + MER2 DNA MER2_type 4 325 -20 324 0 0 0 chr5 10553706 10553742 -192531790 + (CA)n Simple_repeat Simple_repeat 2 37 0 186 43 0 0 chr5 10553829 10553852 -192531680 + (A)n Simple_repeat Simple_repeat 1 23 0 2087 244 30 38 chr5 10553897 10554469 -192531063 + MER90 LTR ERV1 5 573 -41 1847 207 11 3 chr5 10554469 10554831 -192530701 - MLT1A1 LTR MaLR 0 365 1 2087 244 30 38 chr5 10554831 10554869 -192530663 + MER90 LTR ERV1 573 610 -4 217 302 54 39 chr5 10555038 10555167 -192530365 - L2 LINE L2 -256 3057 2927 2253 108 0 0 chr5 10555555 10555842 -192529690 - AluSx SINE Alu -25 287 1 21 36 0 0 chr5 10555972 10556000 -192529532 + AT_rich Low_complexity Low_complexity 1 28 0 781 239 91 0 chr5 10556127 10556357 -192529175 - MIR SINE MIR 0 262 12 21 0 0 0 chr5 10557326 10557347 -192528185 + AT_rich Low_complexity Low_complexity 1 21 0 547 125 0 0 chr5 10557825 10557905 -192527627 + MADE1 DNA Mariner 1 80 0 180 295 16 0 chr5 10558028 10558089 -192527443 + L2 LINE L2 2691 2752 -562 935 214 45 67 chr5 10558145 10558458 -192527074 + MLT1B LTR MaLR 85 390 0 205 229 0 49 chr5 10559086 10559147 -192526385 + CT-rich Low_complexity Low_complexity 1 58 0 214 306 74 8 chr5 10559499 10559620 -192525912 - L2 LINE L2 -1 3312 3184 190 308 33 0 chr5 10560511 10560602 -192524930 - MIR SINE MIR -120 142 49 2284 107 0 0 chr5 10562248 10562558 -192522974 - AluSx SINE Alu -2 310 1 608 262 29 14 chr5 10563524 10563734 -192521798 - MER20 DNA MER1_type -3 216 4 817 229 124 1 chr5 10565199 10565424 -192520108 - MLT1D LTR MaLR 0 505 226 1004 138 0 0 chr5 10565458 10565603 -192519929 + AluSg/x SINE Alu 135 279 -33 261 0 0 0 chr5 10565604 10565633 -192519899 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 434 183 17 126 chr5 10565650 10565724 -192519808 - MLT1D LTR MaLR -349 156 110 1999 194 3 6 chr5 10565724 10566090 -192519442 + MLT1A1 LTR MaLR 1 365 0 434 183 17 126 chr5 10566090 10566190 -192519342 - MLT1D LTR MaLR -395 110 1 558 299 7 0 chr5 10567076 10567220 -192518312 - MIR SINE MIR -105 157 13 28 29 0 0 chr5 10569035 10569070 -192516462 + AT_rich Low_complexity Low_complexity 1 35 0 3364 235 40 23 chr5 10569288 10570071 -192515461 - L1ME1 LINE L1 -49 6117 5327 2135 140 0 3 chr5 10570071 10570378 -192515154 + AluSg SINE Alu 1 306 -4 3364 235 40 23 chr5 10570378 10570530 -192515002 - L1ME1 LINE L1 -839 5327 5179 1416 207 155 17 chr5 10570530 10570830 -192514702 + MSTD LTR MaLR 1 357 -39 2740 126 34 0 chr5 10570830 10571244 -192514288 - MSTA LTR MaLR 0 428 1 1416 207 155 17 chr5 10571244 10571291 -192514241 + MSTD LTR MaLR 357 396 0 2015 255 48 14 chr5 10571335 10572144 -192513388 - L1ME1 LINE L1 -1025 5121 4285 1284 19 0 37 chr5 10572211 10572373 -192513159 - L1PA4 LINE L1 0 6155 6000 1532 6 0 0 chr5 10573491 10573658 -192511874 - L1PA4 LINE L1 -212 5943 5777 1750 20 0 0 chr5 10573658 10573852 -192511680 + L1PA4 LINE L1 5956 6153 -2 292 250 144 47 chr5 10574164 10574337 -192511195 - MLT1H1 LTR MaLR -1 554 354 4440 98 21 2 chr5 10574361 10574975 -192510557 - MER41B LTR ERV1 -9 626 1 265 297 93 33 chr5 10575098 10575267 -192510265 - MLT1H1 LTR MaLR -290 265 76 753 268 13 31 chr5 10576384 10576445 -192509087 - MER58A DNA MER1_type -2196 224 163 2255 147 50 21 chr5 10576445 10576882 -192508650 + LTR7 LTR ERV1 1 450 0 753 268 13 31 chr5 10576882 10577048 -192508484 - MER58A DNA MER1_type -2257 163 1 469 233 23 39 chr5 10577053 10577182 -192508350 - MER5A DNA MER1_type 0 189 63 345 315 47 7 chr5 10577578 10577727 -192507805 - MIR SINE MIR 0 262 108 294 295 11 0 chr5 10577733 10577828 -192507704 - MIR SINE MIR -90 172 77 2234 102 30 25 chr5 10579827 10580370 -192505162 - MER51A LTR ERV1 0 634 1 1503 199 192 12 chr5 10580373 10580780 -192504752 - MLT2B1 LTR ERVL -40 480 1 878 188 81 22 chr5 10582307 10582530 -192503002 - LTR34 LTR ERV1 0 699 464 1435 75 27 0 chr5 10582546 10582732 -192502800 - MER30 DNA MER1_type -34 196 6 2010 131 84 73 chr5 10582737 10582902 -192502630 - LTR34 LTR ERV1 -228 471 309 1686 141 80 29 chr5 10582902 10583178 -192502354 + AluSg SINE Alu 1 290 -20 2010 131 84 73 chr5 10583178 10583478 -192502054 - LTR34 LTR ERV1 -390 309 1 222 220 0 0 chr5 10584888 10584947 -192500585 + CT-rich Low_complexity Low_complexity 4 62 0 342 188 52 52 chr5 10584972 10585068 -192500464 - L2 LINE L2 -49 3264 3169 211 263 90 15 chr5 10585370 10585503 -192500029 - L2 LINE L2 -422 2892 2750 2647 108 11 0 chr5 10586666 10587037 -192498495 - THE1C LTR MaLR 0 375 1 480 256 0 0 chr5 10587843 10587999 -192497533 + (TG)n Simple_repeat Simple_repeat 1 156 0 423 262 0 0 chr5 10588021 10588166 -192497366 + (TG)n Simple_repeat Simple_repeat 2 146 0 352 296 0 0 chr5 10588189 10588304 -192497228 - MIR SINE MIR -128 134 20 573 256 45 5 chr5 10588855 10589054 -192496478 + L2 LINE L2 2950 3156 -157 1965 197 28 30 chr5 10589076 10589403 -192496129 - L1MB5 LINE L1 -17 6157 5830 2129 125 0 3 chr5 10589403 10589706 -192495826 - AluSx SINE Alu -10 302 1 1965 197 28 30 chr5 10589706 10589815 -192495717 - L1MB5 LINE L1 -344 5830 5722 5315 145 34 14 chr5 10589815 10590697 -192494835 - MER49 LTR ERV1 0 923 24 419 177 104 0 chr5 10590711 10590807 -192494725 - L1MB5 LINE L1 -449 5725 5620 26 30 0 0 chr5 10591177 10591210 -192494322 + AT_rich Low_complexity Low_complexity 1 33 0 385 260 10 102 chr5 10591452 10591648 -192493884 - MER5B DNA MER1_type 0 178 1 220 261 0 31 chr5 10591844 10591909 -192493623 + MER5A DNA MER1_type 8 70 -119 417 290 111 12 chr5 10592794 10592956 -192492576 + L3b LINE CR1 1343 1520 -63 318 240 50 0 chr5 10593203 10593303 -192492229 + GA-rich Low_complexity Low_complexity 1 105 0 3858 139 7 2 chr5 10594004 10594558 -192490974 + MER41D LTR ERV1 1 557 0 551 191 48 34 chr5 10595190 10595337 -192490195 + MER103 DNA DNA 2 150 -16 1533 239 12 6 chr5 10595623 10595954 -192489578 + MER58B DNA MER1_type 1 333 -8 1961 47 9 0 chr5 10595954 10596186 -192489346 - L1PA7 LINE L1 -475 5679 5446 3665 74 4 13 chr5 10596186 10596657 -192488875 + L1PA7 LINE L1 5685 6154 0 2125 122 0 3 chr5 10597550 10597844 -192487688 + AluSx SINE Alu 9 301 -11 2548 158 58 16 chr5 10599303 10599751 -192485781 - MLT1C LTR MaLR 0 467 1 308 358 42 0 chr5 10599852 10599972 -192485560 + MER5B DNA MER1_type 21 145 -33 6904 137 8 64 chr5 10600292 10600451 -192485081 - HSMAR2 DNA Mariner -118 1184 1018 2111 128 0 7 chr5 10600451 10600747 -192484785 + AluSx SINE Alu 1 294 -18 6904 137 8 64 chr5 10600747 10601840 -192483692 - HSMAR2 DNA Mariner -284 1018 2 6313 211 27 37 chr5 10602967 10605640 -192479892 - L1MC1 LINE L1 -314 6019 3376 2313 136 33 25 chr5 10606014 10606375 -192479157 - THE1B LTR MaLR 0 364 1 210 118 0 0 chr5 10608112 10608146 -192477386 + (GA)n Simple_repeat Simple_repeat 1 34 0 2197 259 28 44 chr5 10611268 10611562 -192473970 - L1MD3 LINE L1 -7 8035 7738 2171 113 0 0 chr5 10611562 10611845 -192473687 - AluSq SINE Alu -26 287 5 2197 259 28 44 chr5 10611845 10612335 -192473197 - L1MD3 LINE L1 -304 7738 7280 2623 125 8 3 chr5 10612335 10612696 -192472836 - THE1B LTR MaLR -1 363 1 2197 259 28 44 chr5 10612696 10612763 -192472769 - L1MD3 LINE L1 -762 7280 7213 23 33 0 0 chr5 10612885 10612915 -192472617 + AT_rich Low_complexity Low_complexity 1 30 0 364 297 71 23 chr5 10613494 10613760 -192471772 + L1M4 LINE L1 2697 2975 -3171 283 354 77 0 chr5 10614787 10614917 -192470615 + MIR SINE MIR 8 147 -115 419 143 0 0 chr5 10614917 10614980 -192470552 - MSTA LTR MaLR 0 428 366 * 647 160 0 25 chr5 10614967 10615086 -192470446 - MSTA LTR MaLR -312 116 1 2044 102 26 22 chr5 10615086 10615399 -192470133 - MSTA-int LTR MaLR 0 1580 1267 638 148 289 0 chr5 10615399 10615534 -192469998 - MSTA LTR MaLR -252 176 3 1302 177 262 12 chr5 10615545 10615703 -192469829 + MSTA LTR MaLR 19 136 -292 189 0 0 0 chr5 10615703 10615724 -192469808 + (TC)n Simple_repeat Simple_repeat 1 21 0 1302 177 262 12 chr5 10615724 10615893 -192469639 + MSTA LTR MaLR 136 428 0 268 242 67 67 chr5 10615893 10616013 -192469519 + MIR SINE MIR 143 262 0 258 262 24 0 chr5 10616213 10616297 -192469235 + L1ME LINE L1 52 137 -5933 1877 272 73 47 chr5 10616698 10618936 -192466596 + L1ME LINE L1 390 2693 -3387 * 2404 263 92 4 chr5 10618933 10619756 -192465776 - L1M4 LINE L1 -1342 4804 3909 465 293 6 13 chr5 10619751 10619908 -192465624 + L1ME1 LINE L1 6006 6161 -5 * 256 278 120 0 chr5 10621682 10621790 -192463742 + L1ME4a LINE L1 5999 6119 -2 235 217 17 17 chr5 10623713 10623773 -192461759 + MIR SINE MIR 86 145 -117 1351 226 43 48 chr5 10624009 10624381 -192461151 - MLT1A2 LTR MaLR -1 373 4 594 54 14 0 chr5 10627180 10627254 -192458278 - MER4B LTR ERV1 -8 602 528 636 311 34 0 chr5 10629147 10629356 -192456176 - MIR SINE MIR -45 217 2 234 0 0 0 chr5 10629364 10629390 -192456142 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 227 311 8 25 chr5 10629400 10629522 -192456010 + L1MEd LINE L1 53 172 -5947 744 182 8 8 chr5 10629938 10630070 -192455462 + FRAM SINE Alu 34 165 -11 396 0 0 0 chr5 10630519 10630563 -192454969 + (CA)n Simple_repeat Simple_repeat 2 45 0 250 311 56 28 chr5 10630970 10631150 -192454382 + L2 LINE L2 2775 2959 -355 205 305 102 0 chr5 10631082 10631200 -192454332 + MIR SINE MIR 59 188 -74 * 2283 73 20 3 chr5 10631787 10631907 -192453625 + AluY SINE Alu 1 118 -193 495 33 0 0 chr5 10631907 10631968 -192453564 + (CA)n Simple_repeat Simple_repeat 2 62 0 2283 73 20 3 chr5 10631968 10632147 -192453385 + AluY SINE Alu 118 305 -6 273 128 0 0 chr5 10632613 10632660 -192452872 + (CA)n Simple_repeat Simple_repeat 2 48 0 699 125 8 25 chr5 10634990 10635110 -192450422 + MER4D LTR ERV1 1 118 -785 * 3840 128 37 37 chr5 10635103 10635745 -192449787 - MER4D LTR ERV1 -90 782 141 307 259 82 0 chr5 10635756 10635841 -192449691 + MLT2B1 LTR ERVL 370 461 -59 3785 200 46 12 chr5 10635871 10636625 -192448907 + MLT-int LTR MaLR 1 780 -955 302 344 103 43 chr5 10636760 10637393 -192448139 + L2 LINE L2 2088 2758 -556 2529 142 61 0 chr5 10637558 10637953 -192447579 - MSTA LTR MaLR -9 419 1 600 279 83 10 chr5 10638692 10639007 -192446525 - L1ME3A LINE L1 -12 6158 5815 278 355 142 18 chr5 10639036 10639318 -192446214 + L3 LINE CR1 1258 1574 -3 1794 150 0 24 chr5 10640460 10640754 -192444778 - AluSx SINE Alu -15 297 11 232 125 0 42 chr5 10641671 10641719 -192443813 + LTR66 LTR ERVL 394 439 -171 391 231 22 52 chr5 10642563 10642697 -192442835 - Charlie7 DNA MER1_type -1927 685 556 231 380 0 0 chr5 10642755 10642826 -192442706 + L2 LINE L2 3143 3213 -59 375 311 40 13 chr5 10642876 10643027 -192442505 - L2 LINE L2 -224 3089 2935 302 229 19 57 chr5 10643040 10643145 -192442387 - Charlie7 DNA MER1_type -2088 524 424 1743 293 26 26 chr5 10643145 10643239 -192442293 - L1MEc LINE L1 -5646 750 657 1883 81 102 42 chr5 10643239 10643522 -192442010 + AluY SINE Alu 1 300 -11 1743 293 26 26 chr5 10643522 10644143 -192441389 - L1MEc LINE L1 -5738 658 35 277 313 75 0 chr5 10644259 10644393 -192441139 - Charlie7 DNA MER1_type -2208 404 261 985 257 168 32 chr5 10645457 10645932 -192439600 - L1ME2 LINE L1 -2 6162 5623 1436 316 36 30 chr5 10645933 10646334 -192439198 - MLT1G1 LTR MaLR -66 529 123 2136 191 14 3 chr5 10646334 10646691 -192438841 + MLT1A1 LTR MaLR 1 361 -4 1436 316 36 30 chr5 10646691 10646815 -192438717 - MLT1G1 LTR MaLR -472 123 1 1197 286 130 12 chr5 10647035 10647542 -192437990 + MLT1F1 LTR MaLR 1 567 0 301 228 65 22 chr5 10647868 10647960 -192437572 + MIR SINE MIR 119 214 -48 300 156 31 0 chr5 10649775 10649839 -192435693 - L1MA7 LINE L1 0 6291 6226 320 356 95 11 chr5 10650152 10650416 -192435116 - L1ME LINE L1 -5526 544 259 2630 208 65 50 chr5 10650724 10651321 -192434211 + MER82 DNA MER2_type 2 607 -46 300 300 36 70 chr5 10651443 10651773 -192433759 - L1MEc LINE L1 -5580 816 498 264 331 61 13 chr5 10652014 10652154 -192433378 - L1MEd LINE L1 -1610 4519 4387 2188 111 0 7 chr5 10652154 10652461 -192433071 - AluSg SINE Alu -5 305 1 264 331 61 13 chr5 10652461 10652631 -192432901 - L1MEd LINE L1 -1742 4387 4194 945 311 136 60 chr5 10652646 10653580 -192431952 - L1MEd LINE L1 -1979 4150 3288 1789 174 7 3 chr5 10653580 10653879 -192431653 + AluJb SINE Alu 1 300 -12 945 311 136 60 chr5 10653879 10654339 -192431193 - L1MEd LINE L1 -2841 3288 2864 2297 104 0 7 chr5 10654339 10654636 -192430896 + AluSg SINE Alu 1 295 -15 945 311 136 60 chr5 10654636 10654845 -192430687 - L1MEd LINE L1 -3265 2864 2425 35 83 0 0 chr5 10654852 10654936 -192430596 + AT_rich Low_complexity Low_complexity 1 84 0 303 246 49 55 chr5 10654971 10655064 -192430468 - L1MEd LINE L1 -3756 2373 2280 1096 224 121 44 chr5 10655064 10655403 -192430129 + MLT1A1 LTR MaLR 1 365 0 303 246 49 55 chr5 10655403 10655492 -192430040 - L1MEd LINE L1 -3849 2280 2192 283 86 0 0 chr5 10655900 10655935 -192429597 + THE1A LTR MaLR 321 355 0 * 816 113 8 6 chr5 10655921 10655935 -192429597 - MSTB LTR MaLR -292 136 124 12771 85 6 2 chr5 10655935 10657509 -192428023 + THE1B-int LTR MaLR 1 1580 0 2128 132 21 66 chr5 10657510 10657890 -192427642 + THE1B LTR MaLR 2 364 0 816 113 8 6 chr5 10657890 10658005 -192427527 - MSTB LTR MaLR -303 125 3 391 377 54 14 chr5 10658125 10658475 -192427057 - L1MEd LINE L1 -5472 647 284 2099 95 6 63 chr5 10658863 10659178 -192426354 - AluSq SINE Alu -12 301 5 417 271 46 30 chr5 10659193 10659427 -192426105 - L1MD3 LINE L1 0 8041 7823 318 269 175 18 chr5 10659530 10659701 -192425831 - L2 LINE L2 -970 2344 2147 199 0 0 61 chr5 10660277 10660310 -192425222 + (CA)n Simple_repeat Simple_repeat 2 32 0 1346 31 9 0 chr5 10661821 10662043 -192423489 + (CTCA)n Simple_repeat Simple_repeat 1 224 0 1558 164 4 14 chr5 10662703 10662978 -192422554 - AluJo SINE Alu -22 290 19 308 24 24 0 chr5 10663286 10663327 -192422205 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 496 269 86 0 chr5 10663734 10663920 -192421612 - LTR16C LTR ERVL -4 487 286 524 222 120 24 chr5 10664616 10664783 -192420749 + MLT1J2 LTR MaLR 1 183 -267 882 256 106 41 chr5 10664930 10665419 -192420113 - LTR33 LTR ERVL 0 521 1 189 299 37 65 chr5 10665844 10665951 -192419581 - L2 LINE L2 -15 3257 3154 2102 111 0 27 chr5 10666159 10666456 -192419076 + AluSg SINE Alu 1 289 -21 285 296 170 18 chr5 10667086 10667309 -192418223 - MIR SINE MIR -2 260 4 309 322 113 0 chr5 10667508 10667623 -192417909 - L2 LINE L2 0 3272 3145 216 67 0 0 chr5 10668174 10668204 -192417328 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 22 0 0 0 chr5 10669321 10669343 -192416189 + AT_rich Low_complexity Low_complexity 1 22 0 400 302 118 12 chr5 10669527 10669696 -192415836 + MIR SINE MIR 28 214 -48 191 186 34 34 chr5 10669982 10670041 -192415491 + MIR SINE MIR 87 145 -63 709 276 91 53 chr5 10670340 10670790 -192414742 + MLT1C LTR MaLR 1 467 0 774 290 81 39 chr5 10671024 10671358 -192414174 + L1PA15 LINE L1 408 755 -6032 15221 219 18 24 chr5 10671391 10676960 -192408572 + L1PA15 LINE L1 1262 6815 -1 1499 224 153 20 chr5 10677159 10677303 -192408229 - MLT1D LTR MaLR 0 505 381 186 71 0 0 chr5 10677303 10677331 -192408201 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1499 224 153 20 chr5 10677331 10677632 -192407900 - MLT1D LTR MaLR -124 381 1 1899 147 0 33 chr5 10678643 10678942 -192406590 + AluSx SINE Alu 1 289 -23 3061 169 60 3 chr5 10679388 10679955 -192405577 + MER6A DNA MER2_type 1 599 -6 237 314 19 38 chr5 10680298 10680403 -192405129 + MIR3 SINE MIR 12 114 -94 462 49 0 0 chr5 10680418 10680479 -192405053 + (TG)n Simple_repeat Simple_repeat 2 62 0 2131 108 3 7 chr5 10680498 10680793 -192404739 + AluSg1 SINE Alu 1 294 -15 2464 166 74 21 chr5 10680886 10681320 -192404212 + MSTB2 LTR MaLR 1 457 0 1057 228 58 67 chr5 10681669 10682189 -192403343 + MLT2D LTR ERVL 1 520 0 300 53 0 0 chr5 10682209 10682247 -192403285 + (GAAAA)n Simple_repeat Simple_repeat 2 39 0 299 245 19 19 chr5 10682756 10682862 -192402670 + (TA)n Simple_repeat Simple_repeat 2 107 0 673 254 0 0 chr5 10682879 10683005 -192402527 - FLAM_A SINE Alu -3 130 5 189 244 22 0 chr5 10683139 10683184 -192402348 + L2 LINE L2 3258 3303 -10 1672 158 34 4 chr5 10683726 10684041 -192401491 + AluSx SINE Alu 11 333 0 384 209 41 12 chr5 10684464 10684617 -192400915 - L1MA9 LINE L1 -7 6290 6021 21 57 0 0 chr5 10684880 10684915 -192400617 + AT_rich Low_complexity Low_complexity 1 35 0 538 362 33 9 chr5 10685647 10685984 -192399548 + L2 LINE L2 2026 2370 -944 395 287 47 16 chr5 10686082 10686211 -192399321 + MLT1J2 LTR MaLR 13 145 -305 244 241 19 0 chr5 10686293 10686347 -192399185 - L2 LINE L2 -2 3311 3257 325 306 59 41 chr5 10686541 10686711 -192398821 + MIR SINE MIR 7 179 -83 28 61 0 0 chr5 10687976 10688025 -192397507 + AT_rich Low_complexity Low_complexity 1 49 0 322 260 52 0 chr5 10689447 10689543 -192395989 - MER5A DNA MER1_type -80 109 9 521 341 81 47 chr5 10691208 10691309 -192394223 + L2 LINE L2 1791 1887 -1427 1807 148 121 12 chr5 10691309 10691647 -192393885 - THE1C LTR MaLR 0 375 1 521 341 81 47 chr5 10691647 10692260 -192393272 + L2 LINE L2 1887 2530 -784 200 293 88 66 chr5 10692910 10693091 -192392441 + L2 LINE L2 3033 3217 -96 327 322 11 0 chr5 10694779 10694869 -192390663 + MIR3 SINE MIR 75 165 -43 1619 177 67 0 chr5 10694932 10695215 -192390317 - AluJb SINE Alu -2 310 9 191 266 0 47 chr5 10695260 10695324 -192390208 - L2 LINE L2 -4 3268 3208 1455 182 78 4 chr5 10696477 10696746 -192388786 + AluJb SINE Alu 10 298 -14 1253 223 56 68 chr5 10696944 10697408 -192388124 + MLT2D LTR ERVL 1 454 -66 2518 123 62 10 chr5 10697528 10697928 -192387604 + MSTA LTR MaLR 1 421 -7 1465 235 51 8 chr5 10698486 10698860 -192386672 - MLT1C LTR MaLR -75 392 3 22 0 0 0 chr5 10700486 10700508 -192385024 + AT_rich Low_complexity Low_complexity 1 22 0 1517 239 13 32 chr5 10701150 10701522 -192384010 + MLT1A1 LTR MaLR 1 365 0 2079 170 101 0 chr5 10701667 10702055 -192383477 + MSTA LTR MaLR 2 428 0 417 291 35 62 chr5 10703265 10703523 -192382009 - LTR16B LTR ERVL 0 464 214 616 292 62 62 chr5 10703730 10704134 -192381398 - L2 LINE L2 -101 3212 2809 1974 196 65 128 chr5 10704165 10704906 -192380626 - LTR8A LTR ERV1 0 727 34 1098 187 57 30 chr5 10705163 10705393 -192380139 + MER46A DNA MER2_type 1 236 0 21 36 0 0 chr5 10705814 10705842 -192379690 + AT_rich Low_complexity Low_complexity 1 28 0 183 315 62 23 chr5 10706019 10706149 -192379383 - MIR SINE MIR -114 148 14 295 291 51 17 chr5 10706384 10706603 -192378929 - L1 LINE L1 -1687 4459 4234 1092 212 77 90 chr5 10706871 10707314 -192378218 + MLT1D LTR MaLR 69 505 0 314 182 0 0 chr5 10707787 10707842 -192377690 - MLT1K LTR MaLR -20 568 514 555 117 0 36 chr5 10708145 10708256 -192377276 + (GGAA)n Simple_repeat Simple_repeat 2 108 0 195 42 0 0 chr5 10708479 10708503 -192377029 + (TAA)n Simple_repeat Simple_repeat 1 24 0 185 283 0 0 chr5 10708503 10708549 -192376983 - L2 LINE L2 -17 3255 3210 1937 153 134 28 chr5 10708574 10708836 -192376696 + MSTA LTR MaLR 1 319 -109 1902 144 76 51 chr5 10708836 10709191 -192376341 - THE1B LTR MaLR 0 364 1 1937 153 134 28 chr5 10709191 10709315 -192376217 + MSTA LTR MaLR 319 428 0 555 271 0 0 chr5 10709336 10709458 -192376074 - MIR SINE MIR -129 133 12 229 323 96 0 chr5 10709496 10709694 -192375838 - L1 LINE L1 -2168 3978 3762 2784 153 39 37 chr5 10710295 10710483 -192375049 + L1MB3 LINE L1 5606 5792 -391 2223 115 0 0 chr5 10710483 10710787 -192374745 - AluSc SINE Alu -5 304 1 2784 153 39 37 chr5 10710787 10711139 -192374393 + L1MB3 LINE L1 5792 6147 -36 182 330 124 0 chr5 10711171 10711268 -192374264 - MIR SINE MIR -62 146 38 2453 165 19 36 chr5 10711298 10711840 -192373692 + LTR27 LTR ERV1 3 501 0 1046 254 70 53 chr5 10712033 10712392 -192373140 - MLT1A1 LTR MaLR 0 365 1 508 107 63 60 chr5 10713673 10714109 -192371423 + GA-rich Low_complexity Low_complexity 1 437 0 253 158 63 0 chr5 10714142 10714237 -192371295 + (CAGGG)n Simple_repeat Simple_repeat 2 102 0 226 232 63 11 chr5 10714241 10714336 -192371196 + GA-rich Low_complexity Low_complexity 1 100 0 438 203 58 0 chr5 10714678 10715010 -192370522 + GA-rich Low_complexity Low_complexity 1 351 0 2173 143 38 41 chr5 10716816 10717181 -192368351 - THE1B LTR MaLR 0 364 1 345 248 90 28 chr5 10717220 10717365 -192368167 + MIR SINE MIR 61 214 -48 5571 236 72 38 chr5 10717790 10718484 -192367048 + L1MB8 LINE L1 14 683 -6276 315 0 0 0 chr5 10718484 10718519 -192367013 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 5571 236 72 38 chr5 10718519 10719565 -192365967 + L1MB8 LINE L1 683 1848 -5111 2201 104 3 0 chr5 10719565 10719862 -192365670 + AluSc SINE Alu 1 298 -11 5571 236 72 38 chr5 10719862 10720385 -192365147 + L1MB8 LINE L1 1848 2352 -4607 366 107 0 0 chr5 10720388 10720444 -192365088 + (CA)n Simple_repeat Simple_repeat 2 57 0 10175 226 69 31 chr5 10720639 10725024 -192360508 + L1MB8 LINE L1 2471 6977 -12 24 32 0 0 chr5 10728606 10728637 -192356895 + AT_rich Low_complexity Low_complexity 1 31 0 271 273 30 20 chr5 10729541 10729640 -192355892 - L3 LINE CR1 -419 1158 1059 1707 236 25 9 chr5 10730203 10730594 -192354938 - MSTD LTR MaLR 0 396 9 588 157 50 41 chr5 10730749 10730870 -192354662 - MLT1A2 LTR MaLR -54 320 199 186 298 12 48 chr5 10731426 10731510 -192354022 - L2 LINE L2 0 3313 3233 1671 266 196 42 chr5 10731847 10733424 -192352108 + HAL1 LINE L1 250 2069 -438 1323 154 0 5 chr5 10733432 10733646 -192351886 + AluSg/x SINE Alu 87 299 -13 243 223 62 77 chr5 10733726 10733856 -192351676 + HAL1 LINE L1 2221 2348 -159 * 468 277 15 0 chr5 10733855 10733985 -192351547 + L1MC5 LINE L1 6698 6829 -1132 903 205 58 99 chr5 10734067 10734384 -192351148 + L1MC5 LINE L1 6858 7157 -804 2486 78 0 0 chr5 10734384 10734690 -192350842 - AluY SINE Alu -5 306 1 903 205 58 99 chr5 10734690 10734767 -192350765 + L1MC5 LINE L1 7157 7236 -725 225 172 78 16 chr5 10735100 10735164 -192350368 + LTR13 LTR ERVK 648 715 -292 4384 112 8 16 chr5 10736394 10737011 -192348521 - MER51A LTR ERV1 0 634 23 1187 331 141 14 chr5 10737656 10738324 -192347208 - L2 LINE L2 -518 2796 2044 377 274 17 28 chr5 10738517 10738696 -192346836 + (CATG)n Simple_repeat Simple_repeat 2 178 0 703 233 181 44 chr5 10739111 10739449 -192346083 - MLT1F1 LTR MaLR -1 541 138 1757 142 36 33 chr5 10739449 10739780 -192345752 - L1MA4A LINE L1 -6 6297 5966 703 233 181 44 chr5 10739780 10739939 -192345593 - MLT1F1 LTR MaLR -404 138 2 225 65 0 0 chr5 10741674 10741705 -192343827 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2305 82 0 0 chr5 10741708 10741989 -192343543 - AluY SINE Alu -30 281 1 2320 78 3 3 chr5 10742787 10743071 -192342461 + AluSp SINE Alu 1 284 -29 185 0 40 0 chr5 10743088 10743113 -192342419 + (GAAA)n Simple_repeat Simple_repeat 2 27 0 306 173 29 0 chr5 10744626 10744775 -192340757 + (TA)n Simple_repeat Simple_repeat 1 153 0 1543 194 0 7 chr5 10746217 10746525 -192339007 + AluJb SINE Alu 1 306 0 210 277 71 45 chr5 10748094 10748249 -192337283 + MIR3 SINE MIR 50 208 0 282 189 11 67 chr5 10748386 10748476 -192337056 + (TAGA)n Simple_repeat Simple_repeat 1 85 0 200 311 0 0 chr5 10749535 10749580 -192335952 - L2 LINE L2 -89 3183 3139 180 0 0 0 chr5 10749606 10749626 -192335906 + (T)n Simple_repeat Simple_repeat 1 20 0 559 203 27 27 chr5 10749916 10750064 -192335468 + LTR67 LTR ERVL 407 554 -3 327 177 0 0 chr5 10750943 10751005 -192334527 + CT-rich Low_complexity Low_complexity 2 63 0 234 245 0 0 chr5 10752653 10752702 -192332830 + (TCCA)n Simple_repeat Simple_repeat 2 50 0 1168 247 150 71 chr5 10753290 10753864 -192331668 + MLT1E2 LTR MaLR 6 624 -2 1346 203 17 24 chr5 10755225 10755521 -192330011 - AluJo SINE Alu -7 295 2 21 0 0 0 chr5 10756244 10756265 -192329267 + AT_rich Low_complexity Low_complexity 1 21 0 214 338 84 33 chr5 10756591 10756804 -192328728 + L3 LINE CR1 653 876 -701 338 234 16 81 chr5 10760015 10760139 -192325393 - L2 LINE L2 0 3313 3198 581 239 28 35 chr5 10760261 10760403 -192325129 + L1MEc LINE L1 431 571 -5825 1771 149 0 31 chr5 10760467 10760818 -192324714 + AluSg SINE Alu 1 342 0 689 274 89 35 chr5 10760829 10761347 -192324185 + L1MEc LINE L1 1315 1860 -4536 472 167 0 12 chr5 10761351 10761435 -192324097 - AluSg/x SINE Alu -20 289 207 1516 150 75 4 chr5 10761451 10761704 -192323828 - AluSx SINE Alu -41 271 1 2417 64 3 22 chr5 10761711 10762022 -192323510 - AluY SINE Alu -6 305 1 1416 111 0 5 chr5 10762150 10762348 -192323184 + AluSg/x SINE Alu 116 312 0 1530 251 52 34 chr5 10762348 10762906 -192322626 + L1MEc LINE L1 2326 2893 -3322 1299 309 108 41 chr5 10762907 10763891 -192321641 - L2 LINE L2 -293 3020 1971 263 319 88 0 chr5 10764160 10764251 -192321281 + MLT1I LTR MaLR 138 236 -173 404 19 38 0 chr5 10764842 10764895 -192320637 - MLT2A2 LTR ERVL 0 453 399 324 167 12 24 chr5 10764895 10764979 -192320553 + (CATATA)n Simple_repeat Simple_repeat 5 87 0 2761 115 0 10 chr5 10764979 10765363 -192320169 - MLT2A2 LTR ERVL -73 380 1 270 0 0 0 chr5 10766541 10766571 -192318961 + (CA)n Simple_repeat Simple_repeat 2 31 0 216 247 194 0 chr5 10766639 10766732 -192318800 - L2 LINE L2 -2 3311 3201 2642 105 13 8 chr5 10767489 10767862 -192317670 - THE1C LTR MaLR 0 375 1 26 30 0 0 chr5 10768430 10768463 -192317069 + AT_rich Low_complexity Low_complexity 1 33 0 604 329 74 18 chr5 10768866 10769310 -192316222 - L1MC/D LINE L1 -2026 5782 5314 402 337 111 49 chr5 10769311 10770071 -192315461 - L1MC/D LINE L1 -866 5280 4474 188 176 28 28 chr5 10770160 10770268 -192315264 + (TATAA)n Simple_repeat Simple_repeat 5 112 0 210 211 0 28 chr5 10770271 10770342 -192315190 + (TTTA)n Simple_repeat Simple_repeat 2 70 0 313 287 43 64 chr5 10770545 10770827 -192314705 - L1MC/D LINE L1 -2022 4124 3849 24 67 0 0 chr5 10771468 10771513 -192314019 + AT_rich Low_complexity Low_complexity 1 45 0 358 291 89 58 chr5 10771614 10771927 -192313605 - L1ME4a LINE L1 -174 5947 5625 282 73 0 0 chr5 10772025 10772066 -192313466 + (TGAA)n Simple_repeat Simple_repeat 3 43 0 768 287 69 28 chr5 10772173 10772519 -192313013 - MLT1I LTR MaLR -2 407 42 189 0 0 0 chr5 10772519 10772540 -192312992 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 768 287 69 28 chr5 10772540 10772583 -192312949 - MLT1I LTR MaLR -367 42 2 214 191 0 0 chr5 10772762 10772804 -192312728 + (TAA)n Simple_repeat Simple_repeat 1 42 0 27 81 0 0 chr5 10773120 10773182 -192312350 + AT_rich Low_complexity Low_complexity 1 62 0 3584 119 6 24 chr5 10773345 10773882 -192311650 - MER1A DNA MER1_type 0 527 1 2443 75 0 0 chr5 10774044 10774336 -192311196 - AluY SINE Alu -19 292 1 1918 153 20 0 chr5 10775394 10775689 -192309843 + AluSx SINE Alu 1 301 -11 336 289 67 21 chr5 10776697 10776891 -192308641 - LTR33 LTR ERVL -304 217 15 360 0 0 0 chr5 10777751 10777791 -192307741 + (CA)n Simple_repeat Simple_repeat 2 41 0 223 239 22 43 chr5 10778631 10778723 -192306809 + (TAGA)n Simple_repeat Simple_repeat 4 93 0 556 301 36 18 chr5 10778807 10779026 -192306506 - LTR16C LTR ERVL 0 491 269 1965 157 7 0 chr5 10779584 10779889 -192305643 - AluSx SINE Alu -5 307 1 272 217 0 12 chr5 10783354 10783437 -192302095 + GA-rich Low_complexity Low_complexity 4 85 0 491 313 124 17 chr5 10787701 10787992 -192297540 - L2 LINE L2 0 3313 2992 325 299 0 9 chr5 10789744 10789851 -192295681 - MIR3 SINE MIR -16 192 87 374 311 11 33 chr5 10790533 10790617 -192294915 + GA-rich Low_complexity Low_complexity 3 87 -91 2092 115 4 4 chr5 10790617 10790920 -192294612 + AluSc SINE Alu 1 303 0 374 311 11 33 chr5 10790920 10791012 -192294520 + GA-rich Low_complexity Low_complexity 87 178 0 331 182 26 0 chr5 10792225 10792302 -192293230 - MER116 DNA Mariner -1 79 1 1366 170 13 9 chr5 10792630 10792860 -192292672 + MLT2B3 LTR ERVL 1 231 -323 326 220 10 0 chr5 10792860 10792960 -192292572 + CT-rich Low_complexity Low_complexity 2 102 0 566 163 11 0 chr5 10792974 10793066 -192292466 + MLT2B3 LTR ERVL 235 327 -227 478 211 8 29 chr5 10793412 10793661 -192291871 + GA-rich Low_complexity Low_complexity 1 243 0 421 281 90 53 chr5 10795132 10795872 -192289660 + L1MEd LINE L1 756 1516 -4613 2036 47 0 28 chr5 10796028 10796283 -192289249 + AluY SINE Alu 64 311 0 360 64 0 0 chr5 10796283 10796330 -192289202 + (TA)n Simple_repeat Simple_repeat 1 47 0 1510 267 100 28 chr5 10796682 10797618 -192287914 + L1MEd LINE L1 2113 3116 -3013 469 113 0 0 chr5 10797632 10797694 -192287838 + AluJ/FLAM SINE Alu 1 62 -250 670 120 0 0 chr5 10798676 10798776 -192286756 - AluSg/x SINE Alu -5 307 208 187 348 130 36 chr5 10798932 10799070 -192286462 - L2 LINE L2 -4 3268 3118 2034 39 0 0 chr5 10799551 10799781 -192285751 - L1PA5 LINE L1 -3 6151 5922 251 242 207 60 chr5 10799957 10800029 -192285503 + HAL1 LINE L1 814 874 -1633 195 42 0 0 chr5 10800029 10800053 -192285479 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 251 242 207 60 chr5 10800053 10800294 -192285238 + HAL1 LINE L1 874 1173 -1334 1251 246 153 25 chr5 10800398 10800837 -192284695 + MLT1D LTR MaLR 3 497 -8 244 263 132 9 chr5 10800852 10800966 -192284566 + HAL1 LINE L1 1276 1403 -1104 587 207 8 0 chr5 10800968 10801089 -192284443 - MSTD LTR MaLR 0 396 275 202 264 128 111 chr5 10801411 10801764 -192283768 - L2 LINE L2 -396 2918 2560 1586 199 38 0 chr5 10803203 10803320 -192282212 + AluJo SINE Alu 1 112 -200 198 0 0 0 chr5 10803320 10803342 -192282190 + (CAA)n Simple_repeat Simple_repeat 3 24 0 1586 199 38 0 chr5 10803342 10803511 -192282021 + AluJo SINE Alu 112 298 -14 974 258 97 52 chr5 10803579 10804017 -192281515 + MLT1C LTR MaLR 5 467 0 304 130 0 0 chr5 10804293 10804339 -192281193 - MADE1 DNA Mariner 0 80 35 2982 199 90 55 chr5 10804724 10805522 -192280010 + LTR1B LTR ERV1 1 826 0 2411 169 0 5 chr5 10805733 10806100 -192279432 - MLT1A1 LTR MaLR 0 365 1 189 375 116 0 chr5 10806596 10806708 -192278824 + L2 LINE L2 3126 3250 -22 1887 129 30 23 chr5 10806752 10807055 -192278477 + AluSx SINE Alu 1 305 -7 1805 142 0 0 chr5 10807055 10807308 -192278224 + AluSx SINE Alu 1 253 -59 402 21 0 0 chr5 10807313 10807360 -192278172 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 485 333 101 16 chr5 10808023 10808341 -192277191 - MLT1L LTR MaLR -44 571 227 560 77 188 51 chr5 10808346 10808444 -192277088 + L1MA7 LINE L1 6156 6274 -17 2056 132 48 38 chr5 10808444 10808815 -192276717 - THE1C LTR MaLR 0 375 1 560 77 188 51 chr5 10808815 10808833 -192276699 + L1MA7 LINE L1 6274 6288 -3 259 179 18 0 chr5 10809228 10809284 -192276248 + LTR33A LTR ERVL 467 523 0 479 271 147 66 chr5 10810073 10810556 -192274976 + LTR33A LTR ERVL 1 522 -1 21 57 0 0 chr5 10811105 10811140 -192274392 + AT_rich Low_complexity Low_complexity 1 35 0 217 135 27 0 chr5 10811399 10811436 -192274096 + CT-rich Low_complexity Low_complexity 2 39 0 269 218 0 69 chr5 10811664 10811751 -192273781 - L1MC4 LINE L1 -1321 6721 6641 180 286 71 12 chr5 10811798 10811882 -192273650 + MIR SINE MIR 97 185 -77 305 138 0 17 chr5 10813222 10813280 -192272252 + (TAA)n Simple_repeat Simple_repeat 3 59 0 250 318 55 46 chr5 10813660 10813847 -192271685 + MIR SINE MIR 9 192 -67 2281 108 0 0 chr5 10814395 10814700 -192270832 + AluSq SINE Alu 1 305 -8 23 0 0 0 chr5 10814834 10814857 -192270675 + AT_rich Low_complexity Low_complexity 1 23 0 662 291 167 25 chr5 10816510 10817202 -192268330 + L2 LINE L2 2360 3147 -166 249 180 0 0 chr5 10817933 10817983 -192267549 + (TATG)n Simple_repeat Simple_repeat 2 51 0 4877 214 24 15 chr5 10818064 10819885 -192265647 - L1P LINE L1 -3638 3159 1326 11586 214 18 29 chr5 10819888 10821120 -192264412 + L1P LINE L1 3152 4397 -2400 1914 141 0 7 chr5 10821120 10821442 -192264090 + AluY SINE Alu 1 320 0 11586 214 18 29 chr5 10821442 10822973 -192262559 + L1P LINE L1 4397 5884 -913 1220 124 27 0 chr5 10822973 10823158 -192262374 + L1PA15 LINE L1 5955 6144 -21 636 335 129 30 chr5 10823664 10824192 -192261340 - L2 LINE L2 -223 3049 2464 410 150 0 0 chr5 10824808 10824868 -192260664 + THE1B LTR MaLR 305 364 0 * 1240 161 187 22 chr5 10824868 10825130 -192260402 - MSTA LTR MaLR -122 306 1 185 283 0 0 chr5 10825155 10825201 -192260331 + L2 LINE L2 3210 3255 -17 195 42 0 0 chr5 10825201 10825225 -192260307 + (TTA)n Simple_repeat Simple_repeat 1 24 0 555 117 0 36 chr5 10825448 10825559 -192259973 + (TTCC)n Simple_repeat Simple_repeat 2 108 0 314 182 0 0 chr5 10825862 10825917 -192259615 + MLT1K LTR MaLR 514 568 -20 1005 205 75 110 chr5 10826390 10826843 -192258689 - MLT1D LTR MaLR 0 505 69 295 291 51 17 chr5 10827111 10827330 -192258202 + L1M4 LINE L1 4234 4459 -1687 183 315 62 23 chr5 10827566 10827696 -192257836 + MIR SINE MIR 14 148 -114 21 36 0 0 chr5 10827873 10827901 -192257631 + AT_rich Low_complexity Low_complexity 1 28 0 1084 191 57 30 chr5 10828322 10828552 -192256980 - MER46A DNA MER2_type 0 236 1 1976 195 61 127 chr5 10828809 10829552 -192255980 + LTR8A LTR ERV1 34 727 0 600 295 62 62 chr5 10829583 10829987 -192255545 + L2 LINE L2 2809 3212 -101 417 291 35 62 chr5 10830194 10830452 -192255080 + LTR16B LTR ERVL 214 464 0 2079 170 101 0 chr5 10831663 10832051 -192253481 - MSTA LTR MaLR 0 428 2 1489 242 13 32 chr5 10832196 10832568 -192252964 - MLT1A1 LTR MaLR 0 365 1 22 0 0 0 chr5 10833210 10833232 -192252300 + AT_rich Low_complexity Low_complexity 1 22 0 1429 241 51 8 chr5 10834861 10835235 -192250297 + MLT1C LTR MaLR 3 392 -75 3497 229 95 19 chr5 10836508 10837698 -192247834 - L1M4 LINE L1 -821 5325 4045 443 303 152 28 chr5 10845042 10845332 -192240200 - L2 LINE L2 -945 2369 2044 372 278 12 29 chr5 10845529 10845702 -192239830 + (CATG)n Simple_repeat Simple_repeat 2 171 0 331 240 10 83 chr5 10845730 10845922 -192239610 + (CATG)n Simple_repeat Simple_repeat 2 179 0 569 325 132 45 chr5 10846565 10847358 -192238174 + L1MC/D LINE L1 4419 5280 -866 243 285 73 28 chr5 10847359 10847538 -192237994 + L1MC/D LINE L1 5314 5500 -2308 920 206 77 111 chr5 10847896 10848348 -192237184 + MLT1D LTR MaLR 69 505 0 232 189 38 0 chr5 10848805 10848858 -192236674 - MLT1K LTR MaLR -20 568 514 459 131 0 30 chr5 10849153 10849252 -192236280 + (GGAA)n Simple_repeat Simple_repeat 2 97 0 333 272 95 55 chr5 10849596 10850220 -192235312 + L1MDa LINE L1 1279 1927 -4613 1929 48 0 36 chr5 10850377 10850620 -192234912 + AluY SINE Alu 64 298 -8 360 64 0 0 chr5 10850620 10850667 -192234865 + (TA)n Simple_repeat Simple_repeat 1 47 0 24 0 0 0 chr5 10850700 10850724 -192234808 + AT_rich Low_complexity Low_complexity 1 24 0 822 147 37 0 chr5 10851104 10851240 -192234292 - L1PA15 LINE L1 -70 6095 5955 6744 195 28 26 chr5 10851240 10852776 -192232756 - L1PA15 LINE L1 -913 5233 3695 1325 116 10 76 chr5 10852828 10853129 -192232403 - AluY SINE Alu -28 283 3 2176 78 14 4 chr5 10853747 10854028 -192231504 - AluSp SINE Alu -29 284 1 381 223 96 0 chr5 10855389 10855483 -192230049 + MER58 DNA MER1_type 1 103 -112 832 292 83 29 chr5 10855618 10856039 -192229493 + MLT1J2 LTR MaLR 4 447 -3 1164 55 0 0 chr5 10856957 10857103 -192228429 - L1P LINE L1 -5999 147 2 225 0 0 0 chr5 10857728 10857753 -192227779 + (TG)n Simple_repeat Simple_repeat 2 26 0 306 338 40 14 chr5 10857753 10857901 -192227631 - L1MC4a LINE L1 -1882 5926 5775 1898 206 64 7 chr5 10858153 10858521 -192227011 + L1M4 LINE L1 4917 5338 -846 1882 55 16 8 chr5 10858521 10858777 -192226755 + L1PA13 LINE L1 5901 6158 -5 1898 206 64 7 chr5 10858777 10859025 -192226507 + L1M4 LINE L1 5338 5570 -614 390 263 16 3 chr5 10859094 10859203 -192226329 + L1M4 LINE L1 5529 5640 -543 25 31 0 0 chr5 10859222 10859254 -192226278 + AT_rich Low_complexity Low_complexity 1 32 0 964 125 7 0 chr5 10859333 10859485 -192226047 + L1M4 LINE L1 5637 5789 -395 307 49 0 0 chr5 10859586 10859627 -192225905 + L1PA3 LINE L1 6112 6152 -3 2555 131 5 0 chr5 10860975 10861348 -192224184 + THE1C LTR MaLR 1 375 0 28 48 0 0 chr5 10862091 10862133 -192223399 + AT_rich Low_complexity Low_complexity 1 42 0 400 318 103 18 chr5 10863802 10864025 -192221507 + MIR SINE MIR 9 250 -12 9915 74 7 37 chr5 10865607 10867526 -192218006 - L1PA7 LINE L1 -5 6149 4295 2293 104 0 0 chr5 10867526 10867823 -192217709 - AluSc SINE Alu -12 297 1 9915 74 7 37 chr5 10867823 10868173 -192217359 - L1PA7 LINE L1 -1859 4295 3936 342 366 137 26 chr5 10869437 10869852 -192215680 + L2 LINE L2 2812 3272 0 601 71 0 0 chr5 10869923 10870027 -192215505 + AluY SINE Alu 197 300 0 198 143 0 0 chr5 10870205 10870240 -192215292 + (TCC)n Simple_repeat Simple_repeat 3 37 0 484 317 12 19 chr5 10870908 10871069 -192214463 + MIR SINE MIR 16 175 -87 523 203 0 0 chr5 10871358 10871491 -192214041 - MER96B DNA MER1_type? -241 176 44 351 211 39 19 chr5 10871515 10871619 -192213913 + MIR SINE MIR 155 260 -2 840 304 103 21 chr5 10873364 10873782 -192211750 + L2 LINE L2 2855 3306 -7 29 70 0 0 chr5 10874092 10874149 -192211383 + AT_rich Low_complexity Low_complexity 1 57 0 446 279 39 26 chr5 10875509 10875663 -192209869 + MIR SINE MIR 34 189 -73 31 58 0 0 chr5 10877873 10877925 -192207607 + AT_rich Low_complexity Low_complexity 1 52 0 227 260 58 29 chr5 10878156 10878260 -192207272 - L1MC/D LINE L1 -1940 5868 5762 1210 212 48 79 chr5 10878270 10878600 -192206932 - MLT1F LTR MaLR -20 522 203 1181 130 27 0 chr5 10928682 10928867 -192156665 - L1PA15 LINE L1 -21 6144 5955 11275 215 17 30 chr5 10928867 10930402 -192155130 - L1P LINE L1 -913 5233 3748 1965 130 0 14 chr5 10930402 10930738 -192154794 - AluY SINE Alu 0 332 1 11275 215 17 30 chr5 10930738 10931970 -192153562 - L1P LINE L1 -2398 3748 2501 4693 216 22 14 chr5 10931973 10933794 -192151738 + L1P LINE L1 1326 3159 -3638 249 180 0 0 chr5 10933875 10933925 -192151607 + (CATA)n Simple_repeat Simple_repeat 2 51 0 546 296 150 25 chr5 10934551 10935348 -192150184 - L2 LINE L2 0 3313 2360 21 0 0 0 chr5 10937001 10937022 -192148510 + AT_rich Low_complexity Low_complexity 1 21 0 2264 108 0 0 chr5 10937156 10937461 -192148071 - AluSq SINE Alu -8 305 1 250 318 55 46 chr5 10938008 10938195 -192147337 - MIR SINE MIR -67 141 9 326 121 0 17 chr5 10938574 10938632 -192146900 + (TTA)n Simple_repeat Simple_repeat 3 59 0 182 182 0 0 chr5 10938956 10938989 -192146543 - L2 LINE L2 -8 3264 3232 187 286 71 12 chr5 10939974 10940058 -192145474 - MIR SINE MIR -77 185 97 232 224 0 71 chr5 10940105 10940190 -192145342 + L1MC4 LINE L1 6641 6719 -1323 217 135 27 0 chr5 10940416 10940453 -192145079 + GA-rich Low_complexity Low_complexity 2 39 0 451 272 144 68 chr5 10941295 10941780 -192143752 - LTR33A LTR ERVL -1 522 1 2312 106 6 3 chr5 10943067 10943378 -192142154 - AluSx SINE Alu 0 312 1 252 100 0 0 chr5 10944638 10944678 -192140854 + (TA)n Simple_repeat Simple_repeat 2 41 0 378 250 23 0 chr5 10944682 10944770 -192140762 + L1MC4 LINE L1 6614 6703 -1339 228 198 0 62 chr5 10944776 10944872 -192140660 + L1MC4 LINE L1 6614 6703 -1339 396 232 21 42 chr5 10944874 10945034 -192140498 + L1MC3 LINE L1 6526 6703 -1139 386 184 0 82 chr5 10945016 10945114 -192140418 + L1MC4 LINE L1 6614 6703 -1339 * 210 171 0 0 chr5 10945118 10945159 -192140373 + (TA)n Simple_repeat Simple_repeat 2 42 0 2564 199 16 40 chr5 10945176 10945212 -192140320 - MLT2B3 LTR ERVL -15 539 504 954 46 46 17 chr5 10945212 10945387 -192140145 + (TAGA)n Simple_repeat Simple_repeat 1 180 0 2564 199 16 40 chr5 10945387 10945894 -192139638 - MLT2B3 LTR ERVL -50 504 9 251 250 7 0 chr5 10946831 10946979 -192138553 + (CA)n Simple_repeat Simple_repeat 2 150 0 323 118 20 0 chr5 10947665 10947716 -192137816 - MLT1A1 LTR MaLR -313 52 1 298 294 28 18 chr5 10947810 10947919 -192137613 + MER94 DNA DNA 3 112 -22 1609 135 54 0 chr5 10948015 10948274 -192137258 - AluSx SINE Alu 0 312 40 21 36 0 0 chr5 10949210 10949238 -192136294 + AT_rich Low_complexity Low_complexity 1 28 0 1693 181 23 26 chr5 10951430 10951740 -192133792 + AluJo SINE Alu 1 309 -3 201 178 22 0 chr5 10952344 10952389 -192133143 + L2 LINE L2 3268 3313 0 306 0 0 0 chr5 10954141 10954175 -192131357 + (CA)n Simple_repeat Simple_repeat 1 34 0 23 0 0 0 chr5 10954725 10954748 -192130784 + AT_rich Low_complexity Low_complexity 1 23 0 229 297 33 11 chr5 10955121 10955212 -192130320 - MLT1H LTR MaLR 0 549 457 479 315 81 40 chr5 10957092 10957489 -192128043 + LTR33 LTR ERVL 5 417 -104 3091 168 78 28 chr5 10957513 10957736 -192127796 + MER7C DNA MER2_type 1 211 -2817 188 67 33 0 chr5 10957736 10957766 -192127766 + (CTCA)n Simple_repeat Simple_repeat 4 34 0 3091 168 78 28 chr5 10957766 10958115 -192127417 + MER7C DNA MER2_type 211 602 0 2500 121 3 0 chr5 10958808 10959155 -192126377 - L1PA13 LINE L1 -14 6149 5802 21 57 0 0 chr5 10960522 10960557 -192124975 + AT_rich Low_complexity Low_complexity 1 35 0 33 56 0 0 chr5 10960588 10960642 -192124890 + AT_rich Low_complexity Low_complexity 1 54 0 1613 95 36 0 chr5 10960775 10960997 -192124535 + L1PA10 LINE L1 5935 6164 -4 36 53 0 0 chr5 10961126 10961183 -192124349 + AT_rich Low_complexity Low_complexity 1 57 0 270 285 51 15 chr5 10961316 10961453 -192124079 - MIR SINE MIR -40 222 81 363 23 0 0 chr5 10961468 10961512 -192124020 + (TG)n Simple_repeat Simple_repeat 2 45 0 1369 214 206 3 chr5 10961515 10961893 -192123639 - MLT2B2 LTR ERVL -60 455 1 235 296 0 35 chr5 10962010 10962125 -192123407 + (CATATA)n Simple_repeat Simple_repeat 2 112 0 * 274 275 58 7 chr5 10962066 10962204 -192123328 + (TAGA)n Simple_repeat Simple_repeat 2 146 0 1807 137 63 3 chr5 10962443 10962727 -192122805 - AluJb SINE Alu -11 301 1 12665 176 22 8 chr5 10964125 10965846 -192119686 - L1PB3 LINE L1 0 6154 4460 230 29 59 0 chr5 10965846 10965880 -192119652 + (TTTTA)n Simple_repeat Simple_repeat 2 37 0 12665 176 22 8 chr5 10965880 10966285 -192119247 - L1PB3 LINE L1 -1694 4460 4062 1962 138 10 3 chr5 10966285 10966581 -192118951 - AluSg SINE Alu -12 298 1 12665 176 22 8 chr5 10966581 10967924 -192117608 - L1PB3 LINE L1 -2092 4062 2633 1164 221 31 7 chr5 10968196 10968501 -192117031 - L1MB5 LINE L1 0 6180 5867 1097 223 16 27 chr5 10968500 10968756 -192116776 + L1MB5 LINE L1 5625 5877 -297 * 24 0 0 0 chr5 10969139 10969163 -192116369 + AT_rich Low_complexity Low_complexity 1 24 0 246 381 25 8 chr5 10969928 10970046 -192115486 - L2 LINE L2 -2047 1267 1148 2282 112 7 0 chr5 10970060 10970364 -192115168 + AluSg SINE Alu 1 306 -4 1888 184 3 0 chr5 10970382 10970691 -192114841 + AluSx SINE Alu 1 310 -2 1204 275 44 6 chr5 10970802 10971122 -192114410 + LTR16A LTR ERVL 116 447 -3 473 307 70 30 chr5 10971128 10971457 -192114075 + L2 LINE L2 2201 2542 -772 933 250 63 31 chr5 10973045 10973400 -192112132 - MLT2D LTR ERVL -8 389 1 279 371 60 12 chr5 10974080 10974247 -192111285 + MIR3 SINE MIR 3 177 -31 476 296 66 49 chr5 10974355 10974581 -192110951 + MIR SINE MIR 9 238 -24 250 192 207 14 chr5 10974623 10974733 -192110799 + MIR SINE MIR 33 154 -68 275 297 40 20 chr5 10975690 10975791 -192109741 + MIR SINE MIR 50 152 -110 198 370 76 0 chr5 10976661 10976780 -192108752 - L2 LINE L2 -22 3250 3123 21 36 0 0 chr5 10977020 10977048 -192108484 + AT_rich Low_complexity Low_complexity 1 28 0 708 141 62 8 chr5 10977400 10977528 -192108004 - L1MB5 LINE L1 0 6174 6040 2406 72 0 7 chr5 10977669 10977975 -192107557 - AluY SINE Alu -7 304 1 624 51 0 25 chr5 10977975 10978054 -192107478 - AluY SINE Alu -177 134 58 1088 166 59 63 chr5 10978434 10978624 -192106908 - L1MB5 LINE L1 -122 6052 5862 1726 179 43 18 chr5 10978624 10978953 -192106579 + MER1B DNA MER1_type 1 337 0 1088 166 59 63 chr5 10978953 10979033 -192106499 - L1MB5 LINE L1 -312 5862 5783 1079 203 11 103 chr5 10979052 10979431 -192106101 - MLT1B LTR MaLR -32 358 15 1230 199 139 42 chr5 10979449 10979688 -192105844 - L1MB5 LINE L1 -386 5788 5507 2238 125 3 0 chr5 10979688 10979999 -192105533 - AluSx SINE Alu 0 312 1 1230 199 139 42 chr5 10979999 10980091 -192105441 - L1MB5 LINE L1 -667 5507 5425 471 247 61 47 chr5 10980089 10980324 -192105208 - L1MC/D LINE L1 -350 5771 5541 * 3204 199 61 15 chr5 10980527 10981281 -192104251 - L1MB5 LINE L1 -1910 4236 3448 3299 191 30 80 chr5 10981284 10982136 -192103396 + L1PA12 LINE L1 5347 6156 -12 269 250 47 0 chr5 10982465 10982529 -192103003 + L2 LINE L2 2897 2963 -309 636 209 32 0 chr5 10982531 10982674 -192102858 - L1MC4 LINE L1 -964 7062 6884 231 267 0 80 chr5 10982775 10982850 -192102682 + L2 LINE L2 3245 3313 0 1244 209 133 37 chr5 10983527 10983951 -192101581 + MER66A LTR ERV1 97 478 0 239 284 81 20 chr5 10984888 10985036 -192100496 - L1 LINE L1 -1723 4423 4267 2504 284 72 37 chr5 10985941 10987652 -192097880 - L1 LINE L1 -2230 3916 2146 378 260 42 0 chr5 10987673 10987769 -192097763 + MER45A DNA AcHobo 79 178 0 254 254 218 0 chr5 10987917 10988027 -192097505 - MIR SINE MIR -2 260 127 230 341 44 0 chr5 10988054 10988145 -192097387 - MIR SINE MIR -123 139 45 189 0 0 0 chr5 10989342 10989363 -192096169 + (A)n Simple_repeat Simple_repeat 1 21 0 186 43 0 0 chr5 10989779 10989802 -192095730 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 1377 112 0 16 chr5 10989822 10990009 -192095523 - AluSx SINE Alu -127 185 2 1023 214 119 35 chr5 10990972 10991320 -192094212 - MER31B LTR ERV1 0 543 74 4131 136 47 16 chr5 10993060 10993738 -192091794 - LTR34 LTR ERV1 0 699 1 25 0 0 0 chr5 10995138 10995163 -192090369 + AT_rich Low_complexity Low_complexity 1 25 0 497 274 80 63 chr5 10995280 10995642 -192089890 + L1ME4a LINE L1 5574 5941 -180 363 282 24 8 chr5 10995835 10995874 -192089658 - L1MA10 LINE L1 -14 6320 6282 1758 252 35 46 chr5 10995874 10996465 -192089067 - L1ME1 LINE L1 -44 6122 5538 6648 92 18 3 chr5 10996491 10997725 -192087807 - L1PA10 LINE L1 0 6168 4917 425 286 86 52 chr5 10997800 10998069 -192087463 - LTR43 LTR ERV1 -145 457 180 988 217 9 9 chr5 10998584 10998796 -192086736 - L1ME1 LINE L1 -629 5537 5326 2618 231 113 86 chr5 10998798 10999049 -192086483 + L1M4 LINE L1 3611 3854 -2292 372 111 0 0 chr5 10999049 10999112 -192086420 + (TATG)n Simple_repeat Simple_repeat 2 64 0 2618 231 113 86 chr5 10999112 10999358 -192086174 + L1M4 LINE L1 3854 4092 -2054 1970 138 3 25 chr5 10999358 10999677 -192085855 - AluSx SINE Alu 0 312 1 2618 231 113 86 chr5 10999677 11000727 -192084805 + L1M4 LINE L1 4092 5335 -811 2219 119 64 9 chr5 11001004 11001348 -192084184 - THE1B LTR MaLR -1 363 1 203 187 40 27 chr5 11002397 11002472 -192083060 + (CATATA)n Simple_repeat Simple_repeat 3 78 0 312 318 30 38 chr5 11002844 11002976 -192082556 - MIR SINE MIR -112 150 20 730 293 127 21 chr5 11002982 11003361 -192082171 - L2 LINE L2 -1 3312 2894 283 275 113 50 chr5 11003669 11003829 -192081703 + MIR3 SINE MIR 13 182 -26 212 100 50 0 chr5 11004779 11004819 -192080713 + (TG)n Simple_repeat Simple_repeat 2 43 0 879 161 6 25 chr5 11005572 11005734 -192079798 - THE1C LTR MaLR 0 375 217 583 162 9 9 chr5 11005738 11005843 -192079689 - THE1C LTR MaLR -321 107 3 354 163 28 0 chr5 11008000 11008072 -192077460 + Tigger4(Zombi) DNA MER2_type -2 2717 -14 1810 166 7 14 chr5 11008346 11008641 -192076891 + AluJb SINE Alu 1 293 -19 709 258 79 97 chr5 11009457 11009965 -192075567 + MLT1F LTR MaLR 28 526 -16 5137 106 13 12 chr5 11010531 11011221 -192074311 - LTR8 LTR ERV1 0 691 1 2314 165 89 50 chr5 11012148 11012681 -192072851 + LTR8A LTR ERV1 1 554 -173 2256 162 77 2 chr5 11012681 11013083 -192072449 + MER57B LTR ERV1 3 434 0 880 222 20 86 chr5 11013896 11014198 -192071334 + MER33 DNA MER1_type 7 288 -36 411 163 163 0 chr5 11014221 11014319 -192071213 + L1MA8 LINE L1 6170 6283 -8 226 131 66 82 chr5 11014324 11014385 -192071147 + MER33 DNA MER1_type 258 317 -7 329 305 207 53 chr5 11014929 11015267 -192070265 - L1ME LINE L1 -5629 441 52 3241 159 19 62 chr5 11015541 11016181 -192069351 - LTR9 LTR ERV1 0 612 1 2044 189 84 25 chr5 11016584 11017200 -192068332 - MER39 LTR ERV1 -5 702 2 281 261 51 72 chr5 11017348 11017486 -192068046 + MLT1H LTR MaLR 37 171 -378 320 287 18 43 chr5 11017592 11017657 -192067875 + MER41B LTR ERV1 54 119 -516 2455 79 0 10 chr5 11017657 11017962 -192067570 + AluY SINE Alu 1 302 -9 320 287 18 43 chr5 11017962 11018145 -192067387 + MER41B LTR ERV1 119 430 -205 250 260 130 41 chr5 11018534 11018657 -192066875 + MLT1H LTR MaLR 400 533 -16 1769 165 9 36 chr5 11018782 11019115 -192066417 + MER65A LTR ERV1 3 326 -119 554 90 51 0 chr5 11019105 11019183 -192066349 + MER51B LTR ERV1 296 377 0 * 1800 199 18 15 chr5 11020827 11021169 -192064363 + MER61A LTR ERV1 1 343 0 4456 133 61 22 chr5 11021169 11021927 -192063605 + MER61A-int LTR ERV1 1 787 -4430 * 26128 98 27 14 chr5 11021912 11025712 -192059820 + MER61A-int LTR ERV1 1320 5216 -1 1913 164 26 23 chr5 11025712 11026054 -192059478 + MER61A LTR ERV1 1 343 0 455 273 62 11 chr5 11026187 11026363 -192059169 - MIR SINE MIR -58 204 20 641 284 39 0 chr5 11026944 11027148 -192058384 + L1ME2 LINE L1 5364 5575 -2210 553 169 0 0 chr5 11027157 11027240 -192058292 + AluJ/FLAM SINE Alu 2 84 -228 282 256 156 11 chr5 11027240 11027330 -192058202 + L1ME2 LINE L1 5573 5675 -489 1670 221 56 25 chr5 11027474 11027923 -192057609 + L1ME2 LINE L1 5683 6145 -19 2092 164 62 34 chr5 11028310 11028726 -192056806 - MSTA LTR MaLR 0 428 1 1422 236 15 18 chr5 11028749 11029143 -192056389 + Charlie1b DNA MER1_type 2 394 -129 26 30 0 0 chr5 11029143 11029176 -192056356 + AT_rich Low_complexity Low_complexity 1 33 0 299 279 52 52 chr5 11029421 11029593 -192055939 + MIR SINE MIR 47 218 -44 201 206 175 16 chr5 11029803 11029866 -192055666 + L2 LINE L2 3200 3272 0 21 57 0 0 chr5 11030149 11030184 -192055348 + AT_rich Low_complexity Low_complexity 1 35 0 2008 186 49 3 chr5 11031860 11032209 -192053323 - MLT1A1 LTR MaLR 0 365 1 189 141 41 59 chr5 11032267 11032437 -192053095 + (TTATA)n Simple_repeat Simple_repeat 3 169 0 * 252 124 87 6 chr5 11032406 11032567 -192052965 + (TA)n Simple_repeat Simple_repeat 1 174 0 28 29 0 0 chr5 11032637 11032672 -192052860 + AT_rich Low_complexity Low_complexity 1 35 0 1631 202 74 3 chr5 11033248 11033585 -192051947 + MLT1A1 LTR MaLR 4 364 -1 1612 196 95 83 chr5 11033934 11034000 -192051532 - MLT1D LTR MaLR 0 505 441 2095 113 0 7 chr5 11034000 11034284 -192051248 + AluSx SINE Alu 1 282 -30 1612 196 95 83 chr5 11034284 11034713 -192050819 - MLT1D LTR MaLR -64 441 4 485 117 64 0 chr5 11035452 11035546 -192049986 - L1MA8 LINE L1 -101 6190 6091 571 173 9 0 chr5 11035546 11035640 -192049892 + L1MA8 LINE L1 6179 6289 -2 252 322 9 0 chr5 11035707 11035822 -192049710 + L1MCc LINE L1 1285 1400 -5023 572 223 81 39 chr5 11035831 11036156 -192049376 + MLT1F LTR MaLR 175 542 0 1238 249 36 42 chr5 11036156 11036634 -192048898 + L1ME3A LINE L1 5646 6120 -50 4648 174 111 32 chr5 11038508 11039585 -192045947 - MER52C LTR ERV1 0 1278 116 276 77 0 0 chr5 11040330 11040369 -192045163 + (CA)n Simple_repeat Simple_repeat 2 40 0 2040 148 35 27 chr5 11040731 11041103 -192044429 + THE1C LTR MaLR 1 375 0 402 317 7 21 chr5 11041620 11041762 -192043770 - L2 LINE L2 -1 3312 3173 1113 294 75 21 chr5 11041851 11042408 -192043124 - L2 LINE L2 -413 2901 2315 1285 268 26 52 chr5 11042415 11042878 -192042654 + MLT1C LTR MaLR 10 460 -7 565 283 143 7 chr5 11042892 11043185 -192042347 - L2 LINE L2 -1001 2313 1981 2088 204 20 32 chr5 11043204 11043646 -192041886 + MER70A LTR ERVL 36 472 0 259 284 128 0 chr5 11043723 11043832 -192041700 - L2 LINE L2 -1391 1923 1801 298 320 77 13 chr5 11043947 11044103 -192041429 + L2 LINE L2 2623 2788 -526 366 326 99 38 chr5 11044199 11044648 -192040884 + L1MC/D LINE L1 5269 5743 -419 * 618 225 8 0 chr5 11044625 11044754 -192040778 - L1M2 LINE L1 -494 5818 5689 769 180 0 0 chr5 11044754 11044885 -192040647 + L1MA9 LINE L1 6174 6312 0 746 231 9 59 chr5 11044889 11044977 -192040555 + L1MD1 LINE L1 6033 6124 -118 2264 124 0 0 chr5 11044977 11045283 -192040249 - AluSq SINE Alu -7 306 1 746 231 9 59 chr5 11045283 11045415 -192040117 + L1MD1 LINE L1 6124 6242 0 625 274 96 15 chr5 11045854 11046124 -192039408 - HAL1 LINE L1 -2213 294 3 1866 196 2 45 chr5 11046136 11046533 -192038999 - MLT1B LTR MaLR -8 382 3 1615 180 39 29 chr5 11046849 11047155 -192038377 - AluJb SINE Alu -3 309 1 560 244 77 18 chr5 11047627 11047795 -192037737 - MER45A DNA AcHobo 0 178 1 2356 60 4 0 chr5 11048916 11049236 -192036296 + AluY SINE Alu 1 321 0 3280 149 39 6 chr5 11049933 11050443 -192035089 - MER1A DNA MER1_type 0 527 1 533 233 43 43 chr5 11051047 11051335 -192034197 + MLT1D LTR MaLR 128 505 0 468 218 0 15 chr5 11051859 11051977 -192033555 - L1MC4 LINE L1 -364 7631 7448 270 0 0 0 chr5 11051990 11052020 -192033512 + (TG)n Simple_repeat Simple_repeat 2 31 0 1695 211 124 63 chr5 11053231 11053805 -192031727 + MLT1E2 LTR MaLR 2 610 -16 2427 185 57 19 chr5 11055921 11055941 -192029591 - L1MC2 LINE L1 -1 6343 6325 2514 64 0 0 chr5 11055941 11056237 -192029295 - AluY SINE Alu -15 296 1 2427 185 57 19 chr5 11056237 11056747 -192028785 - L1MC2 LINE L1 -19 6325 5793 2029 145 0 0 chr5 11056757 11057054 -192028478 - AluSx SINE Alu -13 299 3 871 127 14 18 chr5 11057068 11057285 -192028247 - L1MC1 LINE L1 -271 6062 5698 2003 102 3 108 chr5 11058025 11058348 -192027184 + AluSq SINE Alu 1 289 -14 13336 207 14 9 chr5 11058506 11058553 -192026979 - L1PA15 LINE L1 -1 6164 6119 2053 144 0 0 chr5 11058553 11058894 -192026638 - AluSx SINE Alu 0 312 1 13336 207 14 9 chr5 11058894 11062237 -192023295 - L1PA15 LINE L1 -46 6119 2761 185 0 40 0 chr5 11062237 11062262 -192023270 + (TTG)n Simple_repeat Simple_repeat 2 27 0 13336 207 14 9 chr5 11062262 11062485 -192023047 - L1PA15 LINE L1 -3404 2761 2540 278 260 91 0 chr5 11064675 11064752 -192020780 - LTR33A LTR ERVL -3 520 437 343 273 78 8 chr5 11064849 11064977 -192020555 - LTR50 LTR ERVL -160 635 499 263 298 142 60 chr5 11065631 11065933 -192019599 - HERVL LTR ERVL -255 5399 5073 1793 327 76 27 chr5 11066013 11067248 -192018284 - HERVL LTR ERVL -1234 4530 3157 21 57 0 0 chr5 11067301 11067336 -192018196 + AT_rich Low_complexity Low_complexity 1 35 0 488 89 40 20 chr5 11067834 11067935 -192017597 + GA-rich Low_complexity Low_complexity 3 105 0 848 110 6 33 chr5 11067935 11068117 -192017415 + (GAAA)n Simple_repeat Simple_repeat 4 180 0 214 184 0 0 chr5 11068117 11068155 -192017377 + GA-rich Low_complexity Low_complexity 2 39 0 1942 191 100 12 chr5 11068161 11068590 -192016942 - MLT1C LTR MaLR 0 467 1 3624 203 44 48 chr5 11068967 11069884 -192015648 - L1MC3 LINE L1 0 7785 6873 1678 197 16 55 chr5 11069884 11070130 -192015402 - MLT1A1 LTR MaLR 0 365 138 1580 221 106 81 chr5 11070130 11070837 -192014695 - LTR8A LTR ERV1 -2 725 1 1678 197 16 55 chr5 11070837 11070970 -192014562 - MLT1A1 LTR MaLR -227 138 1 1216 197 68 17 chr5 11070970 11071265 -192014267 - L1MC3 LINE L1 -936 6849 6540 2933 141 136 2 chr5 11071301 11071825 -192013707 - LTR29 LTR ERV1 -28 594 1 5142 191 55 6 chr5 11071825 11072871 -192012661 - L1MC3 LINE L1 -1242 6543 5446 2723 32 0 0 chr5 11072874 11073185 -192012347 - AluYa5 SINE Alu 0 311 1 226 161 54 54 chr5 11074143 11074199 -192011333 - MLT1-int LTR MaLR -1311 60 5 245 315 69 22 chr5 11074620 11074810 -192010722 - MIR3 SINE MIR -46 216 15 2301 254 63 15 chr5 11076125 11076732 -192008800 - MER92B LTR ERV1 0 636 1 277 297 78 16 chr5 11077993 11078121 -192007411 - L1MDa LINE L1 -4840 1700 1565 2184 223 109 24 chr5 11078273 11078941 -192006591 + MER50 LTR ERV1 10 734 0 2811 187 36 11 chr5 11079343 11079397 -192006135 + MER44D DNA MER2_type 2 53 -2434 4185 99 51 14 chr5 11079397 11079985 -192005547 - MER4B LTR ERV1 0 610 1 2811 187 36 11 chr5 11079985 11080464 -192005068 + MER44D DNA MER2_type 53 603 -2 2242 78 0 11 chr5 11081189 11081496 -192004036 - AluSc SINE Alu 0 304 1 1276 210 4 0 chr5 11082619 11082857 -192002675 - AluJb SINE Alu -73 239 1 652 301 65 16 chr5 11083709 11083955 -192001577 + LTR16B LTR ERVL 196 453 -11 430 304 75 76 chr5 11084238 11085019 -192000513 + L2 LINE L2 2272 3051 -221 255 31 0 0 chr5 11085070 11085102 -192000430 + (TG)n Simple_repeat Simple_repeat 2 33 0 1850 121 0 72 chr5 11085102 11085409 -192000123 - AluSx SINE Alu -27 285 1 187 243 79 121 chr5 11085547 11085687 -191999845 + L3 LINE CR1 1443 1576 -1 399 236 6 51 chr5 11086087 11086265 -191999267 + (TATATG)n Simple_repeat Simple_repeat 4 173 0 1588 259 112 27 chr5 11086753 11087228 -191998304 + MLT1E LTR MaLR 75 589 -4 578 157 0 0 chr5 11087351 11087434 -191998098 + AluS SINE Alu 2 84 -229 3707 130 28 30 chr5 11088234 11088835 -191996697 + MER4A LTR ERV1 1 600 0 21 57 0 0 chr5 11088964 11088999 -191996533 + AT_rich Low_complexity Low_complexity 1 35 0 274 232 0 0 chr5 11089544 11089600 -191995932 + LTR33 LTR ERVL 77 132 -389 2813 107 3 3 chr5 11089754 11090118 -191995414 + THE1B LTR MaLR 1 364 0 244 261 33 11 chr5 11090148 11090240 -191995292 + LTR33 LTR ERVL 397 490 -31 253 342 7 40 chr5 11090242 11090391 -191995141 - MIR SINE MIR -59 203 60 298 316 162 0 chr5 11091115 11091232 -191994300 - L2 LINE L2 -15 3257 3122 2486 91 0 0 chr5 11092827 11093135 -191992397 + AluSx SINE Alu 1 308 -4 762 308 115 16 chr5 11093505 11093950 -191991582 + LTR33 LTR ERVL 24 512 -9 1667 206 41 15 chr5 11095466 11095805 -191989727 - MER7A DNA MER2_type 0 346 1 234 91 0 0 chr5 11095991 11096024 -191989508 + (TA)n Simple_repeat Simple_repeat 1 33 0 198 0 0 0 chr5 11096077 11096099 -191989433 + (TA)n Simple_repeat Simple_repeat 1 22 0 * 462 49 0 0 chr5 11096098 11096159 -191989373 + (GA)n Simple_repeat Simple_repeat 2 62 0 1522 234 105 18 chr5 11097922 11098380 -191987152 - MLT1D LTR MaLR 0 505 8 409 255 56 87 chr5 11098406 11098637 -191986895 + MLT1K LTR MaLR 328 551 -37 23 0 0 0 chr5 11099292 11099315 -191986217 + AT_rich Low_complexity Low_complexity 1 23 0 2140 117 0 0 chr5 11099928 11100255 -191985277 + AluSx SINE Alu 1 327 0 224 269 10 0 chr5 11100450 11100554 -191984978 + (TG)n Simple_repeat Simple_repeat 2 106 0 841 239 50 18 chr5 11100902 11101120 -191984412 - MLT1B LTR MaLR 0 390 166 507 157 21 21 chr5 11101122 11101262 -191984270 + CT-rich Low_complexity Low_complexity 1 140 0 1053 140 0 0 chr5 11101268 11101446 -191984086 + (TTC)n Simple_repeat Simple_repeat 3 180 0 236 267 0 0 chr5 11101455 11101515 -191984017 - FLAM SINE Alu -1 132 73 * 764 224 11 38 chr5 11101499 11101682 -191983850 - MLT1B LTR MaLR -211 179 2 2082 136 19 45 chr5 11102256 11102630 -191982902 + THE1B LTR MaLR 1 364 0 303 311 52 15 chr5 11103366 11103501 -191982031 + MIR SINE MIR 25 164 -98 233 263 84 66 chr5 11103592 11103805 -191981727 + L1MC1 LINE L1 3895 4111 -2035 383 205 18 35 chr5 11104572 11104807 -191980725 + (TATAA)n Simple_repeat Simple_repeat 1 230 0 228 217 29 0 chr5 11104780 11104849 -191980683 + T-rich Low_complexity Low_complexity 1 71 0 * 23 54 0 0 chr5 11104878 11104915 -191980617 + AT_rich Low_complexity Low_complexity 1 37 0 5354 203 15 16 chr5 11105110 11106113 -191979419 + L1MC1 LINE L1 4819 5821 -512 432 37 0 0 chr5 11106113 11106167 -191979365 + (CA)n Simple_repeat Simple_repeat 1 54 0 5354 203 15 16 chr5 11106167 11106315 -191979217 + L1MC1 LINE L1 5821 5968 -365 2022 152 3 0 chr5 11106315 11106624 -191978908 + AluSx SINE Alu 1 310 -2 5354 203 15 16 chr5 11106624 11106988 -191978544 + L1MC1 LINE L1 5968 6333 0 541 240 25 75 chr5 11107072 11107195 -191978337 + MIR SINE MIR 73 184 -78 2115 128 0 16 chr5 11107195 11107499 -191978033 - AluSx SINE Alu -13 299 1 541 240 25 75 chr5 11107499 11107575 -191977957 + MIR SINE MIR 184 262 0 2051 128 25 0 chr5 11108383 11108664 -191976868 + AluSg SINE Alu 5 292 -18 210 118 0 0 chr5 11109135 11109169 -191976363 + (CATATA)n Simple_repeat Simple_repeat 5 38 0 263 191 176 69 chr5 11109170 11109301 -191976231 + L1ME4a LINE L1 5947 6091 -30 185 105 0 26 chr5 11109932 11109970 -191975562 + (TA)n Simple_repeat Simple_repeat 2 38 0 1473 91 21 45 chr5 11110109 11110352 -191975180 + L1PA5 LINE L1 5918 6154 0 186 189 0 0 chr5 11111694 11111731 -191973801 + (CAT)n Simple_repeat Simple_repeat 2 38 0 236 184 207 23 chr5 11111903 11111990 -191973542 + MIR SINE MIR 52 154 -108 816 271 45 16 chr5 11112911 11113280 -191972252 + L1ME LINE L1 498 873 -5197 680 191 58 143 chr5 11115321 11115465 -191970067 - MLT1B LTR MaLR -122 268 160 2192 129 36 33 chr5 11115465 11115828 -191969704 + THE1B LTR MaLR 1 364 0 680 191 58 143 chr5 11115828 11115976 -191969556 - MLT1B LTR MaLR -230 160 1 294 176 22 11 chr5 11116556 11116647 -191968885 + (CA)n Simple_repeat Simple_repeat 2 93 0 508 303 59 17 chr5 11117010 11117248 -191968284 - LTR16C LTR ERVL -94 397 150 1297 163 0 5 chr5 11117327 11117536 -191967996 + AluJb SINE Alu 86 293 -19 216 135 0 0 chr5 11117550 11117587 -191967945 + (CA)n Simple_repeat Simple_repeat 2 38 0 3103 140 45 18 chr5 11117822 11118373 -191967159 + L1MB3 LINE L1 5618 6183 0 198 305 17 0 chr5 11119300 11119359 -191966173 + L2 LINE L2 3249 3308 -5 1929 104 107 7 chr5 11122640 11122920 -191962612 + AluSx SINE Alu 1 308 -4 766 235 6 0 chr5 11123802 11123964 -191961568 - MLT1E2 LTR MaLR -6 499 337 1152 235 34 53 chr5 11124014 11124392 -191961140 + MLT1C LTR MaLR 97 467 0 1026 226 65 62 chr5 11124409 11124745 -191960787 - MLT1E2 LTR MaLR -289 337 1 199 307 150 13 chr5 11125148 11125301 -191960231 - L2 LINE L2 -222 3050 2877 673 122 9 0 chr5 11125524 11125631 -191959901 + MER50 LTR ERV1 497 604 -130 907 249 128 21 chr5 11128089 11128418 -191957114 - MLT1D LTR MaLR -6 499 136 599 148 9 19 chr5 11128538 11128646 -191956886 - MLT2C2 LTR ERVL -357 107 1 1441 240 58 17 chr5 11129400 11129817 -191955715 + MLT1C LTR MaLR 1 434 -33 1332 115 0 6 chr5 11129829 11130011 -191955521 - AluSq SINE Alu -132 181 1 2078 119 0 7 chr5 11130799 11131092 -191954440 + AluSx SINE Alu 1 291 -21 23 54 0 0 chr5 11131612 11131649 -191953883 + AT_rich Low_complexity Low_complexity 1 37 0 309 206 39 59 chr5 11131663 11131765 -191953767 + MIR3 SINE MIR 86 185 -23 407 339 5 16 chr5 11132578 11132770 -191952762 - MIR SINE MIR -29 233 44 287 269 0 0 chr5 11133440 11133507 -191952025 + CT-rich Low_complexity Low_complexity 2 68 0 669 145 51 0 chr5 11135319 11135457 -191950075 + L1MA5 LINE L1 6155 6299 -1 2967 141 65 6 chr5 11135600 11136090 -191949442 - LTR44 LTR ERV1 0 519 1 3096 77 8 2 chr5 11136257 11136659 -191948873 + MLT2A1 LTR ERVL 1 404 -40 648 173 0 0 chr5 11136670 11136820 -191948712 + (TA)n Simple_repeat Simple_repeat 1 150 0 225 140 0 88 chr5 11136843 11136900 -191948632 + LTR66 LTR ERVL 398 449 -161 * 324 98 59 0 chr5 11136883 11136934 -191948598 + MLT2A1 LTR ERVL 391 444 0 273 119 0 0 chr5 11137411 11137453 -191948079 + (TG)n Simple_repeat Simple_repeat 1 42 0 279 54 0 0 chr5 11137912 11137949 -191947583 + (TG)n Simple_repeat Simple_repeat 1 37 0 1548 113 8 8 chr5 11138156 11138395 -191947137 - MER57B LTR ERV1 0 434 196 24 0 0 0 chr5 11138665 11138689 -191946843 + AT_rich Low_complexity Low_complexity 1 24 0 1397 122 15 5 chr5 11138731 11138936 -191946596 - MER57B LTR ERV1 -227 207 1 1741 195 57 3 chr5 11139146 11139464 -191946068 + MLT1A1 LTR MaLR 9 343 -22 469 162 0 0 chr5 11139631 11139705 -191945827 + FLAM_A SINE Alu 32 105 -37 451 101 0 14 chr5 11140291 11140360 -191945172 - MER4A LTR ERV1 -596 68 1 233 303 0 9 chr5 11140361 11140470 -191945062 - L1MEd LINE L1 -4583 2138 2031 920 96 7 44 chr5 11140476 11140611 -191944921 + FRAM SINE Alu 20 149 -27 274 314 16 21 chr5 11140617 11140811 -191944721 - L1MEd LINE L1 -4550 1990 1798 186 43 0 0 chr5 11140841 11140864 -191944668 + (T)n Simple_repeat Simple_repeat 1 23 0 332 325 22 39 chr5 11140987 11141294 -191944238 - L1MEd LINE L1 -4890 1640 1278 210 37 0 0 chr5 11141307 11141334 -191944198 + (TTG)n Simple_repeat Simple_repeat 1 27 0 191 114 29 0 chr5 11141426 11141461 -191944071 + (TCTA)n Simple_repeat Simple_repeat 4 39 0 250 394 7 19 chr5 11142163 11142318 -191943214 - MER5A DNA MER1_type -36 153 1 252 0 0 0 chr5 11143016 11143044 -191942488 + (CAAAAA)n Simple_repeat Simple_repeat 3 30 0 2200 64 44 17 chr5 11143633 11143930 -191941602 + AluY SINE Alu 1 305 -6 258 156 0 0 chr5 11145553 11145598 -191939934 + GA-rich Low_complexity Low_complexity 2 46 0 291 54 0 0 chr5 11146406 11146443 -191939089 + (CA)n Simple_repeat Simple_repeat 2 38 0 1047 202 40 0 chr5 11146460 11146658 -191938874 - MER20 DNA MER1_type -9 210 5 2176 129 26 6 chr5 11146708 11147050 -191938482 + MER49 LTR ERV1 10 358 -565 931 189 0 11 chr5 11147050 11147230 -191938302 + MER49 LTR ERV1 746 923 0 212 364 31 8 chr5 11147605 11147734 -191937798 - MIR SINE MIR -111 151 20 204 132 26 0 chr5 11148599 11148637 -191936895 + CT-rich Low_complexity Low_complexity 2 40 0 285 29 0 0 chr5 11148637 11148671 -191936861 + (CA)n Simple_repeat Simple_repeat 1 34 0 571 227 244 27 chr5 11150528 11151020 -191934512 - LTR50 LTR ERVL -4 791 83 260 243 21 7 chr5 11152327 11152471 -191933061 + (CA)n Simple_repeat Simple_repeat 1 146 0 2548 164 67 61 chr5 11155263 11155885 -191929647 - L1MC1 LINE L1 -1 6332 5710 221 278 19 0 chr5 11156048 11156102 -191929430 + L2 LINE L2 3006 3060 -253 24 0 0 0 chr5 11156426 11156450 -191929082 + AT_rich Low_complexity Low_complexity 1 24 0 23 0 0 0 chr5 11156614 11156637 -191928895 + AT_rich Low_complexity Low_complexity 1 23 0 1058 214 34 8 chr5 11156677 11156911 -191928621 - MLT1G LTR MaLR 0 590 351 1503 186 84 12 chr5 11156984 11157317 -191928215 - MLT1A1 LTR MaLR 0 365 9 621 228 28 62 chr5 11157318 11157529 -191928003 - MLT1G LTR MaLR -391 204 1 23 0 0 0 chr5 11157640 11157663 -191927869 + AT_rich Low_complexity Low_complexity 1 23 0 1104 173 309 19 chr5 11158503 11158851 -191926681 + MER31B LTR ERV1 6 505 -9 1175 160 5 0 chr5 11158954 11159142 -191926390 - MSTB LTR MaLR -235 191 3 9269 180 21 8 chr5 11159144 11160774 -191924758 - MSTB-int LTR MaLR 0 1651 1 2113 185 28 28 chr5 11160778 11161200 -191924332 - MSTB LTR MaLR -3 423 2 304 325 126 15 chr5 11161778 11161984 -191923548 - LTR33 LTR ERVL 0 521 293 208 250 11 11 chr5 11162427 11162435 -191923097 + (TA)n Simple_repeat Simple_repeat 2 9 -80 2392 87 0 3 chr5 11162435 11162747 -191922785 - AluY SINE Alu 0 311 1 208 250 11 11 chr5 11162747 11162826 -191922706 + (TA)n Simple_repeat Simple_repeat 8 89 0 252 350 26 8 chr5 11163208 11163325 -191922207 - L2 LINE L2 -4 3268 3150 27 29 0 0 chr5 11163977 11164011 -191921521 + AT_rich Low_complexity Low_complexity 1 34 0 2450 96 0 3 chr5 11164364 11164677 -191920855 - AluSp SINE Alu -1 312 1 1735 250 53 21 chr5 11165277 11166108 -191919424 + L1ME2 LINE L1 4905 5768 -396 1111 209 34 47 chr5 11166110 11166406 -191919126 + L1ME2 LINE L1 5863 6154 -10 1984 219 35 22 chr5 11166458 11166947 -191918585 - MLT1D LTR MaLR -8 497 3 493 289 41 5 chr5 11167240 11167437 -191918095 - MER114 LTR ERV 0 648 445 955 239 15 31 chr5 11167544 11167989 -191917543 - L1ME2 LINE L1 -118 6046 5515 697 225 127 12 chr5 11167989 11168242 -191917290 - MER114 LTR ERV -366 282 1 2385 90 3 0 chr5 11168337 11168637 -191916895 + AluSp SINE Alu 1 301 -12 629 319 86 0 chr5 11169181 11169391 -191916141 - LTR16A LTR ERVL 0 450 223 288 359 23 0 chr5 11169426 11169554 -191915978 - LTR16A LTR ERVL -304 146 16 25 31 0 0 chr5 11171799 11171831 -191913701 + AT_rich Low_complexity Low_complexity 1 32 0 1799 147 0 4 chr5 11174752 11175010 -191910522 + AluSx SINE Alu 36 292 -20 412 257 73 0 chr5 11175424 11175560 -191909972 - L1ME3A LINE L1 -317 5922 5777 268 273 70 21 chr5 11175580 11175723 -191909809 - L1ME3A LINE L1 -554 5685 5536 243 251 80 68 chr5 11175772 11175810 -191909722 - L1ME3A LINE L1 -1553 4662 4626 1959 144 18 37 chr5 11175810 11176192 -191909340 + THE1C LTR MaLR 1 375 0 243 251 80 68 chr5 11176192 11176316 -191909216 - L1ME3A LINE L1 -1589 4626 4498 325 286 42 60 chr5 11176337 11176383 -191909149 - L1MEc LINE L1 -3903 2316 2271 1609 145 64 28 chr5 11176383 11176665 -191908867 - AluJb SINE Alu -20 292 1 325 286 42 60 chr5 11176665 11176956 -191908576 - L1MEc LINE L1 -3948 2271 2016 315 281 189 18 chr5 11176992 11177273 -191908259 - L1MEc LINE L1 -4441 1955 1627 228 189 0 0 chr5 11177502 11177539 -191907993 - L1P LINE L1 -1225 4921 4885 188 309 107 0 chr5 11178052 11178136 -191907396 - MIR SINE MIR -130 132 40 826 186 6 19 chr5 11178669 11178825 -191906707 - MLT1D LTR MaLR -351 154 1 473 250 0 0 chr5 11178835 11178939 -191906593 + L1MC5 LINE L1 7315 7418 -543 239 274 128 10 chr5 11181541 11181643 -191903889 - MIR SINE MIR -110 152 39 547 258 84 50 chr5 11181646 11181853 -191903679 + LTR16A1 LTR ERVL 16 214 -243 1884 211 8 6 chr5 11181853 11182217 -191903315 + MLT1A1 LTR MaLR 1 365 0 547 258 84 50 chr5 11182217 11182392 -191903140 + LTR16A1 LTR ERVL 214 456 -1 839 338 42 11 chr5 11182393 11182840 -191902692 + HERV16 LTR ERVL 1 461 -4535 814 323 73 46 chr5 11182872 11183994 -191901538 + ERVL LTR ERVL 3841 5021 -743 873 270 41 55 chr5 11184443 11184902 -191900630 + LTR16A1 LTR ERVL 1 453 -4 30 45 0 0 chr5 11186187 11186231 -191899301 + AT_rich Low_complexity Low_complexity 1 44 0 21 0 0 0 chr5 11186558 11186579 -191898953 + AT_rich Low_complexity Low_complexity 1 21 0 234 220 38 8 chr5 11186783 11186915 -191898617 + (TA)n Simple_repeat Simple_repeat 2 137 0 2255 156 80 3 chr5 11186924 11187314 -191898218 - MSTA LTR MaLR 0 428 9 250 259 104 50 chr5 11187348 11187568 -191897964 - L1M4 LINE L1 -2370 3776 3545 286 294 112 36 chr5 11187697 11188170 -191897362 - L1M4 LINE L1 -2782 3364 2856 2649 20 0 3 chr5 11188262 11188558 -191896974 + AluY SINE Alu 1 295 -16 3433 192 61 9 chr5 11188813 11190167 -191895365 - L1MA9 LINE L1 -113 6199 4772 810 186 35 66 chr5 11190308 11190534 -191894998 + MER20 DNA MER1_type 1 219 0 1688 227 30 35 chr5 11191097 11191559 -191893973 + L1MB5 LINE L1 5714 6173 -1 2440 126 27 10 chr5 11191569 11191975 -191893557 + L1MA3 LINE L1 5893 6305 0 1757 171 105 0 chr5 11193453 11193758 -191891774 - MER1B DNA MER1_type 0 337 1 1932 112 7 0 chr5 11193797 11194075 -191891457 + L1PA12 LINE L1 5748 6027 -141 1960 113 17 125 chr5 11194369 11194777 -191890755 + THE1B LTR MaLR 1 364 0 1314 160 22 9 chr5 11195031 11195262 -191890270 - MLT1C LTR MaLR -233 234 1 1643 115 0 49 chr5 11195331 11195618 -191889914 - AluSx SINE Alu -16 296 24 10390 98 25 16 chr5 11196235 11197819 -191887713 - HERVH LTR ERV1 -6114 1599 1 3473 62 5 7 chr5 11197821 11198270 -191887262 - LTR7 LTR ERV1 -2 448 1 2478 144 10 5 chr5 11198270 11198659 -191886873 - L1PA15 LINE L1 -260 5905 5515 321 96 19 0 chr5 11198656 11198708 -191886824 + L1PA15 LINE L1 5474 5526 -642 * 694 292 116 10 chr5 11198961 11199411 -191886121 + MLT1G LTR MaLR 13 549 -41 626 349 7 0 chr5 11199652 11199921 -191885611 - L1ME LINE L1 -356 5765 5495 1986 108 36 29 chr5 11200325 11200631 -191884901 + AluSx SINE Alu 1 308 -4 9935 96 11 12 chr5 11200832 11202253 -191883279 + HERVH LTR ERV1 1569 2987 -4726 812 169 20 0 chr5 11202247 11202395 -191883137 + HERVH LTR ERV1 3140 3290 -4423 * 3334 122 6 2 chr5 11202385 11202885 -191882647 + HERVH LTR ERV1 3492 3993 -3720 4386 144 3 1 chr5 11202887 11203548 -191881984 + HERVH LTR ERV1 4488 5149 -2564 902 113 7 13 chr5 11203549 11203699 -191881833 + HERVH LTR ERV1 5600 5748 -1965 1850 74 8 0 chr5 11203730 11203988 -191881544 + HERVH LTR ERV1 7429 7688 -25 1603 143 32 11 chr5 11203997 11204018 -191881514 + L1PA15 LINE L1 5880 5899 -266 3482 64 0 9 chr5 11204018 11204470 -191881062 + LTR7 LTR ERV1 1 448 -2 1603 143 32 11 chr5 11204470 11204728 -191880804 + L1PA15 LINE L1 5899 6165 0 2534 153 70 98 chr5 11205257 11205990 -191879542 - LTR8A LTR ERV1 0 691 1 420 167 0 0 chr5 11206540 11206606 -191878926 + MER41C LTR ERV1 1 66 -488 273 111 0 0 chr5 11206602 11206638 -191878894 + MER41C LTR ERV1 25 60 -494 * 300 116 23 0 chr5 11206638 11206681 -191878851 + MER41C LTR ERV1 23 66 -488 243 111 28 0 chr5 11206677 11206713 -191878819 + MER41C LTR ERV1 25 61 -493 * 3138 131 82 0 chr5 11206713 11207203 -191878329 + MER41C LTR ERV1 25 554 0 251 237 31 82 chr5 11207229 11207326 -191878206 + MIR SINE MIR 92 183 -79 248 278 67 0 chr5 11207426 11207516 -191878016 - MER117 DNA MER1_type -37 160 65 2279 98 3 0 chr5 11208235 11208541 -191876991 - AluSp SINE Alu -6 307 1 2505 116 16 8 chr5 11208943 11209315 -191876217 + THE1C LTR MaLR 1 375 0 10410 116 30 15 chr5 11209315 11210872 -191874660 + THE1C-int LTR MaLR 1 1580 0 2560 116 14 5 chr5 11210872 11211243 -191874289 + THE1C LTR MaLR 1 374 -1 243 231 81 46 chr5 11211644 11211817 -191873715 + L1MCc LINE L1 1291 1469 -4954 320 241 43 43 chr5 11211942 11212058 -191873474 + L1MCc LINE L1 1907 2022 -4919 216 0 0 0 chr5 11212060 11212084 -191873448 + (TTTTA)n Simple_repeat Simple_repeat 1 24 0 5492 116 39 5 chr5 11212086 11212765 -191872767 - L1PA13 LINE L1 -11 6152 5497 2249 87 3 6 chr5 11212765 11213077 -191872455 - AluY SINE Alu 0 311 1 5492 116 39 5 chr5 11213077 11213786 -191871746 - L1PA13 LINE L1 -666 5497 4757 22 0 0 0 chr5 11213929 11213951 -191871581 + AT_rich Low_complexity Low_complexity 1 22 0 1638 163 3 26 chr5 11214085 11214391 -191871141 - AluJo SINE Alu -13 299 1 316 266 36 27 chr5 11214414 11214525 -191871007 + MIR SINE MIR 16 122 -93 3356 286 171 29 chr5 11214550 11216506 -191869026 + L2 LINE L2 1060 3312 -1 293 230 127 56 chr5 11217119 11217245 -191868287 - MIR3 SINE MIR -51 157 23 215 234 78 52 chr5 11217784 11217861 -191867671 + MIR SINE MIR 61 139 -69 698 208 127 34 chr5 11217995 11218382 -191867150 + MER31B LTR ERV1 1 543 0 1344 235 87 20 chr5 11220133 11220571 -191864961 + MLT1C LTR MaLR 1 467 0 1702 231 62 9 chr5 11221120 11221557 -191863975 - MLT1C LTR MaLR 0 467 8 23 33 0 0 chr5 11223308 11223338 -191862194 + AT_rich Low_complexity Low_complexity 1 30 0 1528 294 63 10 chr5 11223932 11224157 -191861375 - L1ME3A LINE L1 0 6170 5946 579 292 153 44 chr5 11224157 11224686 -191860846 - L1MB4 LINE L1 -259 5921 5451 2879 158 68 2 chr5 11224686 11225213 -191860319 - MER34B LTR ERV1 0 565 4 579 292 153 44 chr5 11225213 11225779 -191859753 - L1MB4 LINE L1 -729 5451 4685 22 0 0 0 chr5 11225803 11225825 -191859707 + AT_rich Low_complexity Low_complexity 1 22 0 1929 109 37 3 chr5 11225827 11226121 -191859411 - AluSg SINE Alu -6 304 1 798 214 11 21 chr5 11226139 11226326 -191859206 - MLT1A2 LTR MaLR -1 373 189 187 354 12 24 chr5 11234094 11234176 -191851356 + L2 LINE L2 2875 2955 -359 2620 78 8 30 chr5 11234662 11235034 -191850498 - THE1B LTR MaLR 0 364 1 180 0 0 0 chr5 11235903 11235923 -191849609 + (TTTG)n Simple_repeat Simple_repeat 2 21 0 323 261 30 36 chr5 11236531 11236696 -191848836 - L1ME4a LINE L1 -1 6120 5957 383 302 188 0 chr5 11236907 11237056 -191848476 - MIR SINE MIR -19 243 67 2129 96 7 3 chr5 11237216 11237518 -191848014 - AluSg SINE Alu -7 303 1 278 261 0 29 chr5 11239206 11239275 -191846257 + L2 LINE L2 3239 3305 -8 1668 182 72 36 chr5 11240254 11240617 -191844915 + MLT1C LTR MaLR 1 376 -91 907 167 94 42 chr5 11240616 11240808 -191844724 + MLT1C LTR MaLR 266 467 0 * 1805 89 15 74 chr5 11243294 11243618 -191841914 + AluY SINE Alu 1 305 -6 1695 113 19 30 chr5 11243921 11244223 -191841309 + AluSq SINE Alu 24 322 0 1831 151 46 40 chr5 11245159 11245530 -191840002 + THE1C LTR MaLR 1 373 -2 544 126 0 23 chr5 11245536 11245623 -191839909 + THE1C-int LTR MaLR 4 88 -1492 * 1355 106 21 0 chr5 11245597 11245785 -191839747 + THE1C-int LTR MaLR 891 1082 -498 241 167 0 42 chr5 11245785 11245833 -191839699 + MSTB LTR MaLR 381 426 0 933 240 4 39 chr5 11246041 11246270 -191839262 + MER58A DNA MER1_type 4 224 0 259 366 43 6 chr5 11246331 11246495 -191839037 + MIR SINE MIR 67 236 -26 1394 157 15 168 chr5 11247427 11247480 -191838052 - MLT2D LTR ERVL -3 394 335 261 0 0 0 chr5 11247480 11247509 -191838023 + (CA)n Simple_repeat Simple_repeat 2 30 0 1394 157 15 168 chr5 11247509 11247789 -191837743 - MLT2D LTR ERVL -62 335 111 5262 165 30 24 chr5 11247803 11249063 -191836469 - L1MA7 LINE L1 -5 6286 5020 565 158 61 0 chr5 11249065 11249179 -191836353 - MLT2D LTR ERVL -293 121 1 2076 177 3 0 chr5 11249183 11249527 -191836005 - MER7A DNA MER2_type 0 346 4 428 328 62 29 chr5 11249830 11250071 -191835461 + MIR SINE MIR 2 250 -12 472 252 171 85 chr5 11251064 11251499 -191834033 + L1ME LINE L1 858 1339 -5033 317 248 69 0 chr5 11251521 11251647 -191833885 + L1ME LINE L1 1269 1568 -4977 2493 255 90 25 chr5 11252689 11253677 -191831855 - L1MC4a LINE L1 -35 7773 6722 273 260 65 32 chr5 11255286 11255409 -191830123 - L2 LINE L2 -25 3288 3162 2269 70 0 10 chr5 11255857 11256157 -191829375 - AluY SINE Alu -14 297 1 181 295 62 47 chr5 11256179 11256308 -191829224 - L2 LINE L2 -725 2589 2459 320 247 84 101 chr5 11256622 11256800 -191828732 - HAL1 LINE L1 -1231 1276 1102 222 237 0 82 chr5 11256869 11256966 -191828566 + C-rich Low_complexity Low_complexity 3 91 0 2089 109 13 3 chr5 11260604 11260906 -191824626 + AluSx SINE Alu 1 305 -7 184 329 73 12 chr5 11261273 11261355 -191824177 - MIR SINE MIR -79 183 97 2004 106 0 4 chr5 11262676 11262951 -191822581 - AluSg SINE Alu -19 291 18 700 276 61 82 chr5 11263353 11264009 -191821523 + L1MEd LINE L1 457 1098 -5021 2035 190 55 65 chr5 11264597 11265102 -191820430 + MLT2B3 LTR ERVL 1 500 -54 195 175 0 0 chr5 11265105 11265162 -191820370 + A-rich Low_complexity Low_complexity 1 57 0 393 121 0 30 chr5 11265163 11265229 -191820303 + MLT2A2 LTR ERVL 390 453 0 786 237 62 126 chr5 11266191 11267027 -191818505 + L1ME2 LINE L1 854 1851 -4756 * 1583 192 60 6 chr5 11267016 11267365 -191818167 + L1MD1 LINE L1 5875 6242 0 358 284 5 59 chr5 11267361 11267451 -191818081 + L1ME2 LINE L1 1839 1932 -4675 * 1942 151 0 6 chr5 11267451 11267763 -191817769 + AluSx SINE Alu 1 310 -2 358 284 5 59 chr5 11267763 11267876 -191817656 + L1ME2 LINE L1 1932 2031 -4576 1934 170 89 25 chr5 11268267 11268672 -191816860 + Tigger2a DNA MER2_type 1 431 -3 603 238 72 18 chr5 11268724 11268947 -191816585 + L1ME2 LINE L1 5209 5443 -983 904 188 4 2 chr5 11268953 11269199 -191816333 + AluJb SINE Alu 2 295 -17 1396 254 48 8 chr5 11269202 11269719 -191815813 + L1ME2 LINE L1 5450 5987 -457 414 349 9 5 chr5 11269791 11270006 -191815526 + L1ME2 LINE L1 6122 6337 -107 1955 197 48 5 chr5 11270375 11270771 -191814761 + MLT2C2 LTR ERVL 4 416 -48 183 184 0 0 chr5 11270776 11270814 -191814718 + (TCCA)n Simple_repeat Simple_repeat 3 40 0 249 65 0 0 chr5 11270822 11270853 -191814679 - MLT2C2 LTR ERVL 0 464 434 266 174 0 0 chr5 11270873 11270919 -191814613 + MLT2C2 LTR ERVL 509 554 0 342 343 30 18 chr5 11273278 11273447 -191812085 + MIR SINE MIR 86 256 -6 21 0 0 0 chr5 11275088 11275109 -191810423 + AT_rich Low_complexity Low_complexity 1 21 0 1854 108 36 33 chr5 11275230 11275536 -191809996 - AluSx SINE Alu -5 307 1 622 349 7 0 chr5 11275941 11276210 -191809322 + L1ME LINE L1 5495 5765 -356 698 261 113 8 chr5 11276449 11276706 -191808826 - MLT1G LTR MaLR -41 549 266 275 243 43 0 chr5 11276829 11276899 -191808633 - MLT1G LTR MaLR -505 85 13 321 96 19 0 chr5 11277151 11277203 -191808329 - L1PA15 LINE L1 -642 5526 5474 3957 136 20 15 chr5 11277203 11277589 -191807943 + L1PA15 LINE L1 5515 5910 -255 3492 64 0 9 chr5 11277589 11278041 -191807491 + LTR7 LTR ERV1 1 448 -2 3957 136 20 15 chr5 11278041 11278299 -191807233 + L1PA15 LINE L1 5910 6165 0 2672 152 67 97 chr5 11278828 11279563 -191805969 - LTR8A LTR ERV1 0 691 1 238 345 9 9 chr5 11279863 11279973 -191805559 + CT-rich Low_complexity Low_complexity 1 110 0 370 274 12 41 chr5 11280006 11280216 -191805316 + CT-rich Low_complexity Low_complexity 1 203 0 302 229 57 0 chr5 11281151 11281221 -191804311 - MER5A DNA MER1_type -71 118 45 984 118 11 17 chr5 11282005 11282011 -191803521 + (TTCC)n Simple_repeat Simple_repeat 1 182 0 984 118 11 17 chr5 11282011 11282189 -191803343 + (TTCC)n Simple_repeat Simple_repeat 3 179 0 327 342 185 14 chr5 11283542 11284056 -191801476 + L2 LINE L2 2174 2775 -539 237 286 69 51 chr5 11284131 11284306 -191801226 + L2 LINE L2 2912 3089 -224 21 0 0 0 chr5 11284856 11284877 -191800655 + AT_rich Low_complexity Low_complexity 1 21 0 395 60 0 150 chr5 11286766 11286899 -191798633 + AluY SINE Alu 1 113 -188 277 43 43 0 chr5 11287159 11287206 -191798326 + (CA)n Simple_repeat Simple_repeat 2 50 0 1096 148 9 33 chr5 11290698 11290908 -191794624 + AluSx SINE Alu 11 215 -97 882 122 27 40 chr5 11293630 11293778 -191791754 - THE1B LTR MaLR -218 146 1 370 257 88 27 chr5 11293814 11293962 -191791570 + MIR SINE MIR 58 214 -48 1614 238 60 47 chr5 11294387 11294854 -191790678 + L1M4 LINE L1 14 486 -6373 3078 216 90 27 chr5 11295001 11296060 -191789472 + L1M4 LINE L1 5083 6219 -766 1613 82 41 15 chr5 11301424 11301569 -191783963 - AluY SINE Alu -36 275 118 301 43 43 0 chr5 11301569 11301616 -191783916 + (TG)n Simple_repeat Simple_repeat 2 50 0 1613 82 41 15 chr5 11301616 11301738 -191783794 - AluY SINE Alu -193 118 1 236 314 97 0 chr5 11302315 11302439 -191783093 - MIR SINE MIR -68 194 59 229 301 57 24 chr5 11302371 11302494 -191783038 - L2 LINE L2 -355 2959 2833 * 216 184 0 0 chr5 11304708 11304746 -191780786 + GA-rich Low_complexity Low_complexity 1 38 0 2175 181 103 30 chr5 11308350 11308811 -191776721 - THE1-int LTR MaLR -575 1005 498 2088 154 0 0 chr5 11308811 11309122 -191776410 - AluSx SINE Alu -1 311 1 2175 181 103 30 chr5 11309122 11309192 -191776340 - THE1-int LTR MaLR -1082 498 435 3133 191 50 24 chr5 11311967 11312633 -191772899 - MLT1A2-int LTR MaLR -1052 683 1 309 259 82 0 chr5 11312663 11312748 -191772784 - MLT2B1 LTR ERVL -59 461 370 1627 115 83 40 chr5 11312759 11313037 -191772495 + MER4D LTR ERV1 141 430 -442 221 95 0 24 chr5 11315802 11315844 -191769688 + (GAAAA)n Simple_repeat Simple_repeat 4 44 0 299 245 19 19 chr5 11316352 11316458 -191769074 + (TA)n Simple_repeat Simple_repeat 2 107 0 610 244 0 8 chr5 11316474 11316601 -191768931 - FLAM_A SINE Alu -3 130 5 1310 169 19 8 chr5 11317257 11317518 -191768014 + ERVL-B1 LTR ERVL 5492 5755 -9 1877 209 95 35 chr5 11317520 11317949 -191767583 + MLT2B1 LTR ERVL 1 460 -60 186 43 0 0 chr5 11317949 11317972 -191767560 + (TC)n Simple_repeat Simple_repeat 2 24 0 1877 209 95 35 chr5 11317972 11317996 -191767536 + MLT2B1 LTR ERVL 460 481 -39 1401 270 87 34 chr5 11318498 11319946 -191765586 + L1MEc LINE L1 1313 2800 -3415 188 237 34 17 chr5 11320379 11320438 -191765094 + MIR SINE MIR 87 146 -62 1274 226 43 48 chr5 11320673 11321045 -191764487 - MLT1A2 LTR MaLR -1 373 4 806 185 14 7 chr5 11321675 11321821 -191763711 - AluJb SINE Alu -162 150 4 6582 68 12 19 chr5 11321874 11323046 -191762486 - L1PA7 LINE L1 -2 6152 4997 265 224 45 0 chr5 11323888 11323955 -191761577 - MIR SINE MIR -91 171 102 3198 177 2 104 chr5 11324425 11325311 -191760221 + L1P LINE L1 3843 4638 -1508 219 223 42 42 chr5 11325587 11325753 -191759779 + (CACAC)n Simple_repeat Simple_repeat 5 170 0 460 296 115 27 chr5 11326176 11326848 -191758684 + L1MEd LINE L1 965 1737 -4573 1955 159 0 7 chr5 11326990 11327292 -191758240 - AluJb SINE Alu -12 300 1 294 260 52 0 chr5 11329101 11329197 -191756335 + MER5A DNA MER1_type 9 109 -80 7224 92 14 11 chr5 11329690 11330668 -191754864 + MSTA-int LTR MaLR 592 1572 -8 572 171 0 27 chr5 11330694 11330805 -191754727 + MSTA LTR MaLR 9 116 -312 416 143 0 0 chr5 11330792 11330855 -191754677 + MSTA LTR MaLR 366 428 0 * 244 354 77 0 chr5 11330855 11330985 -191754547 - MIR SINE MIR -115 147 8 2639 113 10 3 chr5 11331420 11331811 -191753721 - L1PA11 LINE L1 -235 5939 5546 901 218 32 18 chr5 11331813 11332033 -191753499 - MIR SINE MIR -35 227 5 529 323 11 5 chr5 11333355 11333541 -191751991 - MIR SINE MIR -48 214 28 525 233 125 8 chr5 11333648 11333768 -191751764 + MER63 DNA MER1_type 1 760 -302 3052 66 47 0 chr5 11334213 11334697 -191750835 - L1P2 LINE L1 -682 5473 4966 1525 107 5 5 chr5 11334697 11334913 -191750619 + THE1C LTR MaLR 160 375 0 248 175 87 87 chr5 11335131 11335234 -191750298 + L3 LINE CR1 1192 1294 -283 1906 129 11 0 chr5 11335235 11335513 -191750019 - AluSx SINE Alu -1 311 31 199 0 0 61 chr5 11335939 11335972 -191749560 + (TG)n Simple_repeat Simple_repeat 2 32 0 272 269 175 18 chr5 11336544 11336715 -191748817 + L2 LINE L2 2147 2344 -970 347 256 46 73 chr5 11336823 11337042 -191748490 + L1MC4 LINE L1 7823 8035 -7 285 100 0 0 chr5 11337075 11337115 -191748417 + Alu SINE Alu 5 44 -256 200 57 0 57 chr5 11337311 11337346 -191748186 + (GGAA)n Simple_repeat Simple_repeat 4 36 0 258 247 185 0 chr5 11338655 11338736 -191746796 + MARNA DNA Mariner 265 360 -226 21 82 0 0 chr5 11338761 11338810 -191746722 + AT_rich Low_complexity Low_complexity 1 49 0 243 253 13 27 chr5 11338828 11338903 -191746629 - Charlie4a DNA MER1_type 0 508 435 851 144 0 0 chr5 11338918 11339036 -191746496 + FLAM_C SINE Alu 1 118 -25 227 247 12 0 chr5 11339074 11339155 -191746377 - Charlie4a DNA MER1_type -71 437 356 2162 122 3 3 chr5 11339155 11339459 -191746073 - AluSx SINE Alu -8 304 1 790 176 0 15 chr5 11339581 11339712 -191745820 - AluJb SINE Alu -99 213 85 415 257 115 11 chr5 11339712 11339895 -191745637 - Charlie4a DNA MER1_type -147 361 160 756 37 9 18 chr5 11340461 11340570 -191744962 + AluY SINE Alu 200 307 -4 638 318 17 13 chr5 11341330 11341566 -191743966 - MIR SINE MIR -25 237 1 3381 120 53 18 chr5 11342827 11343336 -191742196 + MER1A DNA MER1_type 1 527 0 2034 114 0 57 chr5 11344157 11344473 -191741059 - AluSc SINE Alu -11 298 1 9334 46 17 2 chr5 11345034 11346213 -191739319 - L1PA13 LINE L1 -3396 3401 2197 181 267 0 0 chr5 11347962 11348022 -191737510 - L2 LINE L2 -151 3162 3103 1029 203 30 9 chr5 11348055 11348287 -191737245 + MLT2C1 LTR ERVL 1 237 -160 1355 206 81 79 chr5 11348955 11349449 -191736083 + Charlie1b DNA MER1_type 7 501 -22 218 267 15 30 chr5 11349764 11349895 -191735637 + (CACAA)n Simple_repeat Simple_repeat 5 133 0 4442 101 44 35 chr5 11350695 11351377 -191734155 + LTR12 LTR ERV1 1 688 0 239 354 31 8 chr5 11351394 11351524 -191734008 - MIR SINE MIR -64 198 66 216 0 0 0 chr5 11351945 11351969 -191733563 + (A)n Simple_repeat Simple_repeat 1 24 0 450 231 388 0 chr5 11353145 11353483 -191732049 + LTR50 LTR ERVL 2 470 -325 225 299 0 15 chr5 11354464 11354531 -191731001 + MER5A DNA MER1_type 7 72 -117 373 82 0 0 chr5 11354535 11354584 -191730948 + HY4 scRNA scRNA 1 49 -44 260 271 0 0 chr5 11354584 11354643 -191730889 + MER5A DNA MER1_type 64 122 -67 2161 84 0 0 chr5 11354695 11354958 -191730574 - AluSc SINE Alu -7 302 40 664 268 188 29 chr5 11357384 11357794 -191727738 - L1ME2 LINE L1 -67 6097 5623 1382 315 40 30 chr5 11357795 11358196 -191727336 - MLT1G1 LTR MaLR -66 529 120 2136 191 14 3 chr5 11358196 11358553 -191726979 + MLT1A1 LTR MaLR 1 361 -4 1382 315 40 30 chr5 11358553 11358675 -191726857 - MLT1G1 LTR MaLR -475 120 1 267 257 38 19 chr5 11358895 11359000 -191726532 + MLT1F1 LTR MaLR 1 107 -460 2168 134 9 170 chr5 11359219 11359435 -191726097 + Charlie1 DNA MER1_type 2198 2447 -314 1527 179 10 56 chr5 11359435 11359737 -191725795 + AluJo SINE Alu 1 288 -24 228 67 0 0 chr5 11359747 11359777 -191725755 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 2168 134 9 170 chr5 11359777 11359847 -191725685 + Charlie1 DNA MER1_type 2457 2537 -224 2125 127 7 10 chr5 11359847 11360154 -191725378 - AluSx SINE Alu -6 306 1 2168 134 9 170 chr5 11360154 11360396 -191725136 + Charlie1 DNA MER1_type 2537 2614 -147 2302 100 0 0 chr5 11360396 11360687 -191724845 - AluSx SINE Alu -21 291 1 2168 134 9 170 chr5 11360687 11360809 -191724723 + Charlie1 DNA MER1_type 2614 2754 -7 386 336 0 16 chr5 11361768 11361896 -191723636 + L2 LINE L2 3188 3313 0 333 68 0 0 chr5 11362169 11362213 -191723319 + (TA)n Simple_repeat Simple_repeat 2 45 0 1074 55 0 0 chr5 11363038 11363166 -191722366 + AluY SINE Alu 174 301 -10 5163 154 35 11 chr5 11363166 11364300 -191721232 - L1MB3 LINE L1 -10 6173 5015 300 300 36 70 chr5 11366051 11366381 -191719151 + L1MEc LINE L1 498 816 -5580 313 243 97 19 chr5 11366386 11366489 -191719043 + L1MEc LINE L1 1056 1166 -5230 2630 208 65 50 chr5 11366502 11367099 -191718433 - MER82 DNA MER2_type -46 607 2 1741 237 71 33 chr5 11367496 11368074 -191717458 + L1ME1 LINE L1 5562 6161 -5 215 233 0 0 chr5 11369302 11369345 -191716187 + L2 LINE L2 1545 1587 -1727 847 258 125 31 chr5 11371750 11372134 -191713398 + L1MD3 LINE L1 5527 5946 -2049 23 78 0 0 chr5 11372151 11372202 -191713330 + AT_rich Low_complexity Low_complexity 1 51 0 2521 76 0 0 chr5 11372888 11373192 -191712340 + AluY SINE Alu 1 304 -7 297 272 184 53 chr5 11373196 11373402 -191712130 + L2 LINE L2 3076 3308 -5 828 174 95 26 chr5 11373478 11373668 -191711864 + MER105 DNA DNA 1 203 -1 186 317 0 0 chr5 11374622 11374682 -191710850 + MIR SINE MIR 57 116 -146 2323 194 26 7 chr5 11375371 11375788 -191709744 - MSTB LTR MaLR 0 426 2 184 275 0 0 chr5 11375909 11375949 -191709583 - L3b LINE CR1 -13 1570 1531 216 111 0 0 chr5 11376003 11376039 -191709493 + (TTTTTA)n Simple_repeat Simple_repeat 2 37 0 15203 86 26 3 chr5 11376121 11379048 -191706484 + L1PA8 LINE L1 3161 6152 -20 238 277 175 15 chr5 11379050 11379187 -191706345 - L3 LINE CR1 -193 1384 1226 2555 55 7 0 chr5 11379196 11379505 -191706027 - AluY SINE Alu 0 311 1 284 341 11 21 chr5 11380452 11380570 -191704962 - MER5B DNA MER1_type -4 174 65 1552 217 45 12 chr5 11380632 11380969 -191704563 + MER7A DNA MER2_type 1 346 0 342 0 0 0 chr5 11381734 11381772 -191703760 + (CA)n Simple_repeat Simple_repeat 2 39 0 2336 80 0 22 chr5 11381945 11382258 -191703274 - AluSp SINE Alu -7 306 1 196 352 28 0 chr5 11382543 11382614 -191702918 - MIR SINE MIR -82 126 54 233 291 0 0 chr5 11383690 11383745 -191701787 + MIR SINE MIR 95 149 -113 3278 211 114 20 chr5 11384097 11385088 -191700444 - Charlie1a DNA MER1_type -49 1406 323 1331 216 172 13 chr5 11385218 11385695 -191699837 - Charlie1a DNA MER1_type -602 853 301 664 269 55 0 chr5 11385701 11385902 -191699630 - Charlie1a DNA MER1_type -1184 271 60 232 303 92 7 chr5 11387395 11387547 -191697985 - MIR SINE MIR -78 184 20 23 0 0 0 chr5 11387566 11387589 -191697943 + AT_rich Low_complexity Low_complexity 1 23 0 1120 178 50 9 chr5 11387808 11388027 -191697505 - MER46A DNA MER2_type 0 236 9 1702 123 24 0 chr5 11388244 11388497 -191697035 - AluSp SINE Alu -54 259 1 200 86 52 17 chr5 11388527 11388585 -191696947 + (TA)n Simple_repeat Simple_repeat 1 60 0 1314 179 0 0 chr5 11388597 11388804 -191696728 + AluSx SINE Alu 1 207 -105 410 143 33 44 chr5 11388804 11388895 -191696637 - L1MA7 LINE L1 -252 6039 5950 1473 201 144 17 chr5 11388899 11389403 -191696129 - Charlie1 DNA MER1_type -884 1877 5 2954 171 54 139 chr5 11390036 11390382 -191695150 + L1MB5 LINE L1 5298 5672 -502 1686 70 33 5 chr5 11390382 11390597 -191694935 + AluSq SINE Alu 1 221 -92 2954 171 54 139 chr5 11390597 11391208 -191694324 + L1MB5 LINE L1 5672 6174 0 557 133 11 22 chr5 11391206 11391296 -191694236 - L1MD1 LINE L1 -53 6189 6101 * 1296 97 0 0 chr5 11391297 11391462 -191694070 + AluSx SINE Alu 2 166 -146 320 214 14 0 chr5 11391462 11391532 -191694000 - L1MD2 LINE L1 -144 6215 6145 543 191 56 0 chr5 11391534 11391660 -191693872 + MER58 DNA MER1_type 86 218 -2202 1163 149 58 10 chr5 11391660 11391868 -191693664 - AluJo SINE Alu -2 310 93 2128 258 29 51 chr5 11392151 11392218 -191693314 + L1MC4 LINE L1 7213 7280 -762 2605 127 8 3 chr5 11392218 11392579 -191692953 + THE1B LTR MaLR 1 363 -1 2128 258 29 51 chr5 11392579 11393071 -191692461 + L1MC4 LINE L1 7280 7733 -309 2139 110 3 0 chr5 11393071 11393353 -191692179 + AluSq SINE Alu 5 287 -26 2128 258 29 51 chr5 11393353 11393650 -191691882 + L1MC4 LINE L1 7733 8035 -7 1830 127 0 31 chr5 11394657 11394981 -191690551 + L1PA5 LINE L1 5841 6154 0 534 299 118 14 chr5 11395153 11395364 -191690168 + MIR SINE MIR 20 252 -10 1016 205 132 99 chr5 11395549 11395913 -191689619 + MLT1D LTR MaLR 5 451 -116 2131 131 3 0 chr5 11395913 11396210 -191689322 - AluSx SINE Alu -14 298 1 1016 205 132 99 chr5 11396210 11396323 -191689209 + MLT1D LTR MaLR 451 559 -8 604 116 16 41 chr5 11396668 11396789 -191688743 - AluSg1 SINE Alu -180 129 12 621 224 128 98 chr5 11397308 11397391 -191688141 - MLT1J LTR MaLR -3 508 429 1920 157 0 10 chr5 11397391 11397691 -191687841 + AluJb SINE Alu 1 297 -15 621 224 128 98 chr5 11397691 11397973 -191687559 - MLT1J LTR MaLR -82 429 132 4031 109 78 10 chr5 11398087 11398693 -191686839 + THE1C-int LTR MaLR 934 1580 0 2347 108 54 38 chr5 11398693 11398842 -191686690 + THE1C LTR MaLR 1 146 -229 1822 149 0 23 chr5 11398842 11399143 -191686389 - AluSg SINE Alu -16 294 1 2347 108 54 38 chr5 11399143 11399362 -191686170 + THE1C LTR MaLR 146 375 0 234 0 0 0 chr5 11399401 11399427 -191686105 + (TG)n Simple_repeat Simple_repeat 2 27 0 260 204 82 20 chr5 11399465 11399563 -191685969 + ERVL LTR ERVL 5474 5577 -187 255 61 0 0 chr5 11400239 11400272 -191685260 + (TAA)n Simple_repeat Simple_repeat 1 33 0 395 183 62 42 chr5 11400483 11400600 -191684932 + MIR SINE MIR 33 149 -62 2298 109 0 0 chr5 11400664 11400968 -191684564 - AluSx SINE Alu -8 304 1 2198 74 0 4 chr5 11402386 11402656 -191682876 - AluSx SINE Alu -43 269 1 1015 209 34 34 chr5 11402981 11403216 -191682316 + MIR SINE MIR 28 262 0 254 248 143 8 chr5 11403447 11403580 -191681952 - L2 LINE L2 -1159 2155 2005 236 375 0 0 chr5 11405236 11405316 -191680216 - MIR3 SINE MIR -21 187 108 368 310 10 0 chr5 11405524 11405624 -191679908 + MIR SINE MIR 162 262 0 2513 128 34 0 chr5 11405733 11406085 -191679447 + THE1B LTR MaLR 1 364 0 299 192 51 39 chr5 11406615 11406693 -191678839 + MLT2D LTR ERVL 270 348 -66 2479 123 65 10 chr5 11406823 11407222 -191678310 + MSTA LTR MaLR 1 421 -7 228 327 127 0 chr5 11408554 11408664 -191676868 + L2 LINE L2 3149 3272 0 2340 77 6 29 chr5 11410057 11410369 -191675163 - AluSx SINE Alu -7 305 1 1531 165 27 44 chr5 11410372 11410669 -191674863 + AluJo SINE Alu 12 303 -9 181 269 58 0 chr5 11410724 11410776 -191674756 + MIR3 SINE MIR 149 203 -5 762 114 8 16 chr5 11411191 11411314 -191674218 - THE1C-int LTR MaLR -1457 123 2 2469 129 13 24 chr5 11411315 11411694 -191673838 - THE1C LTR MaLR 0 375 1 1679 115 27 51 chr5 11411719 11412015 -191673517 + HSMAR2 DNA Mariner 2 290 -1012 * 2284 153 0 11 chr5 11412012 11412384 -191673148 + HSMAR2 DNA Mariner 186 553 -749 2970 140 23 47 chr5 11412384 11412665 -191672867 - L1P4 LINE L1 -549 5616 5330 1669 197 0 13 chr5 11412665 11412964 -191672568 + AluJb SINE Alu 3 297 -15 2970 140 23 47 chr5 11412964 11413589 -191671943 - L1P4 LINE L1 -835 5330 4726 773 256 55 35 chr5 11415976 11416230 -191669302 + MIR SINE MIR 2 260 -2 391 356 55 36 chr5 11416399 11416652 -191668880 - L1M4 LINE L1 -2193 3953 3696 288 0 0 0 chr5 11416656 11416688 -191668844 + (TG)n Simple_repeat Simple_repeat 2 33 0 23 33 0 0 chr5 11416713 11416743 -191668789 + AT_rich Low_complexity Low_complexity 1 30 0 28 61 0 0 chr5 11418556 11418605 -191666927 + AT_rich Low_complexity Low_complexity 1 49 0 533 256 43 89 chr5 11421984 11422242 -191663290 - L1MC4 LINE L1 -1339 6703 6458 1850 130 79 0 chr5 11422966 11423243 -191662289 - AluJo SINE Alu -13 299 1 838 241 10 39 chr5 11423285 11423492 -191662040 + MER63A DNA MER1_type 1 201 -9 256 278 120 0 chr5 11425468 11425576 -191659956 - L1ME4a LINE L1 -2 6119 5999 254 340 124 18 chr5 11427599 11428228 -191657304 + L1M4 LINE L1 4118 4813 -1333 22 0 0 0 chr5 11428228 11428250 -191657282 + AT_rich Low_complexity Low_complexity 1 22 0 352 155 36 0 chr5 11429360 11429444 -191656088 + (TATATG)n Simple_repeat Simple_repeat 1 87 0 1037 181 5 26 chr5 11429451 11429644 -191655888 - AluSg/x SINE Alu -14 298 110 2336 135 44 95 chr5 11429674 11430080 -191655452 + LTR54 LTR ERV1 27 452 -58 1528 129 98 59 chr5 11430080 11430367 -191655165 - AluJo SINE Alu -14 298 1 2336 135 44 95 chr5 11430367 11430428 -191655104 + LTR54 LTR ERV1 452 469 -41 1721 154 3 23 chr5 11430428 11430734 -191654798 + AluSx SINE Alu 1 300 -12 2336 135 44 95 chr5 11430734 11430770 -191654762 + LTR54 LTR ERV1 469 505 -5 227 197 28 42 chr5 11431282 11431353 -191654179 + T-rich Low_complexity Low_complexity 3 72 0 12565 55 15 1 chr5 11431430 11433078 -191652454 + L1P LINE L1 3161 4831 -1315 439 266 0 43 chr5 11433273 11433461 -191652071 + A-rich Low_complexity Low_complexity 1 180 0 312 281 96 44 chr5 11433579 11433714 -191651818 - MER5A DNA MER1_type -1 188 47 871 160 48 43 chr5 11433715 11433903 -191651629 + MER5A DNA MER1_type 1 189 0 26 30 0 0 chr5 11434018 11434051 -191651481 + AT_rich Low_complexity Low_complexity 1 33 0 2160 78 53 0 chr5 11435150 11435431 -191650101 - AluSp SINE Alu -13 300 5 186 43 0 0 chr5 11436689 11436712 -191648820 + (GA)n Simple_repeat Simple_repeat 1 23 0 360 281 91 16 chr5 11437129 11437250 -191648282 - L3 LINE CR1 -73 1504 1375 2384 184 23 12 chr5 11437331 11437810 -191647722 + L1 LINE L1 4416 4899 -1247 739 269 64 42 chr5 11437854 11438118 -191647414 + MSTD LTR MaLR 36 305 -91 875 53 0 26 chr5 11438610 11438758 -191646774 - AluY SINE Alu 0 311 180 486 300 112 15 chr5 11438786 11439046 -191646486 - L3 LINE CR1 -306 1271 987 2284 158 42 0 chr5 11439185 11439590 -191645942 + L1 LINE L1 4672 5093 -1053 323 284 107 58 chr5 11439779 11440004 -191645528 - MLT1K LTR MaLR -342 246 11 4995 52 41 11 chr5 11440056 11440714 -191644818 - LTR17 LTR ERV1 0 780 103 2118 158 26 123 chr5 11440838 11441408 -191644124 - L1MCa LINE L1 -5467 959 445 524 273 153 0 chr5 11442713 11442929 -191642603 + MIR SINE MIR 1 249 -13 2171 177 28 8 chr5 11443462 11443858 -191641674 - MER65C LTR ERV1 -57 404 1 198 232 87 58 chr5 11443860 11443929 -191641603 + MIR SINE MIR 82 152 -110 2458 63 0 3 chr5 11444524 11444823 -191640709 - AluY SINE Alu -11 300 3 272 215 9 109 chr5 11446822 11446961 -191638571 + L1MDb LINE L1 1194 1316 -5080 249 262 39 29 chr5 11446934 11447037 -191638495 + L1M4 LINE L1 3696 3799 -2607 * 445 175 0 0 chr5 11447046 11447109 -191638423 - AluJ/FLAM SINE Alu -248 64 2 2239 244 52 60 chr5 11447110 11447343 -191638189 + L1M4 LINE L1 3804 4037 -2369 2140 115 3 16 chr5 11447343 11447648 -191637884 + AluSx SINE Alu 1 301 -11 2239 244 52 60 chr5 11447648 11448061 -191637471 + L1M4 LINE L1 4037 4444 -1962 1782 115 19 8 chr5 11448061 11448321 -191637211 - AluSq SINE Alu -50 263 1 2239 244 52 60 chr5 11448321 11448554 -191636978 + L1M4 LINE L1 4444 4677 -1729 517 283 147 5 chr5 11448744 11448935 -191636597 + MIR SINE MIR 19 236 -26 2107 98 7 20 chr5 11448995 11449291 -191636241 - AluSg SINE Alu -18 292 1 1879 120 17 17 chr5 11449988 11450280 -191635252 + AluSx SINE Alu 1 292 -20 1561 157 15 11 chr5 11450600 11450862 -191634670 + AluJb SINE Alu 39 301 -11 505 295 170 18 chr5 11450957 11451181 -191634351 - MIR SINE MIR -3 259 2 335 126 53 53 chr5 11451218 11451313 -191634219 + MLT1J2 LTR MaLR 24 118 -332 1307 157 60 4 chr5 11451325 11451560 -191633972 - AluJb SINE Alu 0 312 65 225 333 13 0 chr5 11451663 11451738 -191633794 + MLT1J2 LTR MaLR 226 301 -149 2071 143 0 13 chr5 11451823 11452131 -191633401 + AluSq SINE Alu 1 304 -9 357 272 66 135 chr5 11453242 11453591 -191631941 - L3 LINE CR1 -808 769 445 481 173 70 177 chr5 11453765 11453905 -191631627 - MIR SINE MIR -27 235 129 1719 146 52 4 chr5 11453905 11454197 -191631335 + AluJb SINE Alu 1 305 0 481 173 70 177 chr5 11454197 11454298 -191631234 - MIR SINE MIR -133 129 19 2454 90 0 3 chr5 11454661 11454972 -191630560 - AluSp SINE Alu 0 313 4 1064 132 6 0 chr5 11455111 11455270 -191630262 - AluSc SINE Alu -4 305 146 565 274 0 0 chr5 11455465 11455618 -191629914 - MIR SINE MIR -16 246 94 5517 106 49 17 chr5 11456025 11456316 -191629216 + L1PA16 LINE L1 5106 5386 -780 2012 124 7 39 chr5 11456316 11456622 -191628910 + AluSx SINE Alu 1 296 -16 5517 106 49 17 chr5 11456622 11457353 -191628179 + L1PA16 LINE L1 5386 6157 -9 1924 132 35 0 chr5 11457503 11457791 -191627741 + AluSx SINE Alu 1 298 -14 210 37 0 0 chr5 11457791 11457818 -191627714 + (TGAA)n Simple_repeat Simple_repeat 2 28 0 266 368 65 11 chr5 11458073 11458258 -191627274 - MIR SINE MIR -34 228 34 770 229 59 80 chr5 11458535 11458823 -191626709 + LTR1B LTR ERV1 545 826 0 1541 241 73 44 chr5 11458887 11459406 -191626126 - L1ME1 LINE L1 -14 6152 5619 2054 133 0 3 chr5 11459499 11459785 -191625747 - AluSx SINE Alu -15 297 13 759 181 12 41 chr5 11459795 11459966 -191625566 + L1MB5 LINE L1 6009 6174 0 1233 138 0 0 chr5 11460057 11460231 -191625301 - AluSq SINE Alu -10 303 130 440 143 14 0 chr5 11461823 11461893 -191623639 + AluSx SINE Alu 3 73 -239 6274 130 13 15 chr5 11461894 11462865 -191622667 + LTR5 LTR ERVK 1 969 0 1616 129 0 13 chr5 11462866 11463091 -191622441 + AluSx SINE Alu 71 292 -20 6130 137 49 56 chr5 11463617 11464637 -191620895 - Tigger3b DNA MER2_type -1798 1230 205 216 0 0 0 chr5 11464637 11464661 -191620871 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 2062 108 7 0 chr5 11464663 11464941 -191620591 - AluSx SINE Alu -32 280 1 6130 137 49 56 chr5 11464941 11465155 -191620377 - Tigger3b DNA MER2_type -2824 204 1 1962 147 3 10 chr5 11465161 11465467 -191620065 - AluSx SINE Alu 0 312 9 684 245 88 80 chr5 11465474 11465685 -191619847 - L1ME4a LINE L1 -243 6673 6456 2499 54 3 0 chr5 11465685 11465981 -191619551 - AluY SINE Alu -14 297 1 684 245 88 80 chr5 11465981 11466145 -191619387 - L1ME4a LINE L1 -460 6456 6295 1087 127 0 24 chr5 11466219 11466385 -191619147 - AluSg/x SINE Alu -12 300 139 825 38 114 0 chr5 11466508 11466613 -191618919 + AluY SINE Alu 1 117 -194 286 130 19 56 chr5 11467917 11467971 -191617561 + MER69 DNA AcHobo 15 66 -2460 591 213 28 14 chr5 11468100 11468241 -191617291 + MER69 DNA AcHobo 2380 2522 -4 267 31 0 0 chr5 11468374 11468406 -191617126 + (TG)n Simple_repeat Simple_repeat 2 33 0 1446 179 6 80 chr5 11469779 11469911 -191615621 + AluJo SINE Alu 2 142 -170 2183 78 7 4 chr5 11469911 11470192 -191615340 + AluSc SINE Alu 1 282 -27 1446 179 6 80 chr5 11470192 11470371 -191615161 + AluJo SINE Alu 142 290 -22 1903 69 0 4 chr5 11470373 11470604 -191614928 + AluY SINE Alu 1 230 -81 1710 203 29 29 chr5 11470705 11471085 -191614447 - L1MDa LINE L1 -6158 382 3 777 282 97 24 chr5 11471953 11472365 -191613167 + LTR33 LTR ERVL 42 483 -38 2032 146 14 0 chr5 11472489 11472784 -191612748 + AluJo SINE Alu 1 299 -13 2064 83 6 51 chr5 11472812 11473115 -191612417 + AluSx SINE Alu 1 291 -21 278 26 26 0 chr5 11473115 11473154 -191612378 + (CA)n Simple_repeat Simple_repeat 2 41 0 2780 78 3 0 chr5 11474233 11474594 -191610938 + SVA Other Other 15 376 -1010 366 234 263 7 chr5 11474834 11474971 -191610561 - MIR SINE MIR -84 178 7 242 94 0 0 chr5 11474971 11475003 -191610529 + MLT1H LTR MaLR 12 43 -506 2498 235 50 54 chr5 11475393 11476424 -191609108 - L1ME4a LINE L1 -739 6220 5178 375 237 32 12 chr5 11476435 11476576 -191608956 - L1MCc LINE L1 -4887 1536 1410 273 0 0 96 chr5 11476926 11476978 -191608554 + (TTTCG)n Simple_repeat Simple_repeat 2 48 0 220 200 0 36 chr5 11477135 11477190 -191608342 + CT-rich Low_complexity Low_complexity 3 55 0 284 203 31 0 chr5 11477452 11477516 -191608016 - L1MCc LINE L1 -5938 993 928 4850 70 3 16 chr5 11477517 11478136 -191607396 - SVA Other Other -1 1385 775 353 86 0 71 chr5 11478236 11478306 -191607226 + AluY SINE Alu 238 302 0 288 0 0 0 chr5 11478405 11478437 -191607095 + (GA)n Simple_repeat Simple_repeat 1 32 0 2351 82 7 0 chr5 11479469 11479760 -191605772 + AluSp SINE Alu 1 293 -20 578 179 0 86 chr5 11479774 11479891 -191605641 + L1ME LINE L1 5477 5583 -583 1605 134 53 53 chr5 11479891 11480233 -191605299 + MER4A LTR ERV1 1 342 -322 2238 105 0 3 chr5 11480235 11480530 -191605002 + AluSg SINE Alu 1 294 -16 716 155 181 73 chr5 11480543 11480820 -191604712 + MER4C LTR ERV1 157 465 0 470 188 0 0 chr5 11480820 11480900 -191604632 + L1ME LINE L1 5580 5659 -507 531 298 66 40 chr5 11480971 11481273 -191604259 - L2 LINE L2 -444 2870 2561 2548 55 0 0 chr5 11481321 11481614 -191603918 - AluY SINE Alu -18 293 1 496 188 0 70 chr5 11481841 11481969 -191603563 - L1MC4 LINE L1 -11 8031 7913 219 203 0 0 chr5 11481969 11482033 -191603499 + CT-rich Low_complexity Low_complexity 1 64 0 14248 109 27 44 chr5 11482097 11482906 -191602626 - Tigger1 DNA MER2_type 0 2418 1597 2394 72 0 7 chr5 11482906 11483196 -191602336 - AluY SINE Alu -12 299 12 14248 109 27 44 chr5 11483196 11484655 -191600877 - Tigger1 DNA MER2_type -821 1597 188 399 296 164 0 chr5 11484988 11485177 -191600355 - MIR SINE MIR -15 247 28 2187 95 28 0 chr5 11486199 11486484 -191599048 + AluSc SINE Alu 1 293 -16 1458 160 0 89 chr5 11486582 11486920 -191598612 - AluJb SINE Alu -4 308 1 3599 195 21 75 chr5 11486971 11487886 -191597646 - L1ME1 LINE L1 -19 6147 5299 2261 89 3 0 chr5 11487886 11488209 -191597323 - AluY SINE Alu 0 324 1 3599 195 21 75 chr5 11488209 11488318 -191597214 - L1ME1 LINE L1 -867 5299 5186 2011 148 3 3 chr5 11488397 11488695 -191596837 - AluSx SINE Alu -14 298 1 2257 123 0 3 chr5 11488804 11489112 -191596420 + AluSg SINE Alu 1 307 -3 609 252 66 26 chr5 11489169 11489540 -191595992 + L1ME LINE L1 5254 5644 -477 192 241 93 0 chr5 11490846 11490900 -191594632 + MER5A DNA MER1_type 63 121 -68 1780 177 0 7 chr5 11491191 11491490 -191594042 - AluJo SINE Alu -15 297 1 209 33 33 0 chr5 11491501 11491531 -191594001 + (TAGA)n Simple_repeat Simple_repeat 4 34 0 2330 34 9 96 chr5 11491541 11491863 -191593669 - AluY SINE Alu -17 294 1 1588 168 111 18 chr5 11492024 11492357 -191593175 + MLT1A1 LTR MaLR 1 364 -1 362 222 121 0 chr5 11492408 11492507 -191593025 - L2 LINE L2 -11 3302 3192 2242 111 0 7 chr5 11492578 11492876 -191592656 - AluSx SINE Alu -16 296 1 552 234 43 33 chr5 11492879 11493063 -191592469 - MIR SINE MIR -64 198 13 288 277 92 25 chr5 11493726 11493845 -191591687 + MIR SINE MIR 107 233 -29 342 218 97 1 chr5 11493949 11494040 -191591492 - MIR3 SINE MIR -51 157 59 182 167 0 0 chr5 11496132 11496162 -191589370 + L2 LINE L2 3261 3290 -23 2294 94 3 7 chr5 11496270 11496568 -191588964 - AluSx SINE Alu -15 297 1 431 219 73 0 chr5 11496898 11496994 -191588538 - MLT1I LTR MaLR 0 409 307 249 324 0 0 chr5 11497073 11497147 -191588385 - MLT1I LTR MaLR -254 155 82 2308 70 35 0 chr5 11497166 11497452 -191588080 + AluY SINE Alu 1 296 -15 724 50 350 0 chr5 11497453 11497573 -191587959 + AluSc SINE Alu 132 293 -16 1627 142 11 21 chr5 11498021 11498092 -191587440 - Tigger5 DNA MER2_type 0 2323 2253 2052 138 3 13 chr5 11498092 11498397 -191587135 - AluJb SINE Alu -10 302 1 1627 142 11 21 chr5 11498397 11498606 -191586926 - Tigger5 DNA MER2_type -70 2253 2046 376 304 14 10 chr5 11498896 11499067 -191586465 + A-rich Low_complexity Low_complexity 3 299 0 244 289 12 12 chr5 11499097 11499180 -191586352 + GA-rich Low_complexity Low_complexity 2 84 0 279 289 0 0 chr5 11499512 11499602 -191585930 + L1MC4 LINE L1 6614 6703 -1339 269 216 0 69 chr5 11499521 11499623 -191585909 - L1MC4 LINE L1 -1340 6702 6608 * 231 250 24 12 chr5 11500399 11500483 -191585049 + L1ME3 LINE L1 4757 4841 -1305 462 279 43 5 chr5 11500537 11500879 -191584653 + L1ME3 LINE L1 5071 5426 -738 258 32 0 0 chr5 11500928 11500959 -191584573 + (CAA)n Simple_repeat Simple_repeat 2 32 0 551 280 73 35 chr5 11500961 11501222 -191584310 + L1ME3 LINE L1 5560 5830 -332 2297 92 13 0 chr5 11501223 11501528 -191584004 + AluSg SINE Alu 1 309 -1 2127 85 41 30 chr5 11501595 11501890 -191583642 + AluY SINE Alu 1 298 -13 240 368 53 0 chr5 11501948 11502043 -191583489 - L2 LINE L2 -39 3233 3134 185 413 11 11 chr5 11502134 11502226 -191583306 - L2 LINE L2 -195 3077 2986 1504 77 39 14 chr5 11502290 11502498 -191583034 - AluSg/x SINE Alu -20 292 80 1812 151 0 37 chr5 11502955 11503253 -191582279 - AluJo SINE Alu -13 299 13 754 137 8 23 chr5 11503284 11503415 -191582117 - FLAM_A SINE Alu -1 132 4 1882 101 3 67 chr5 11503451 11503767 -191581765 + AluSp SINE Alu 1 296 -17 2293 78 0 3 chr5 11504538 11504831 -191580701 - AluY SINE Alu -19 292 1 891 237 9 26 chr5 11505145 11505373 -191580159 + MIR SINE MIR 8 231 -31 312 282 22 83 chr5 11505410 11505584 -191579948 - MER5A DNA MER1_type -12 166 1 942 269 119 66 chr5 11506513 11506944 -191578588 - MLT1L LTR MaLR -13 602 195 2312 110 0 0 chr5 11506944 11507243 -191578289 + AluSx SINE Alu 1 299 -13 942 269 119 66 chr5 11507243 11507334 -191578198 - MLT1L LTR MaLR -420 195 110 2078 115 21 0 chr5 11507334 11507621 -191577911 + AluSx SINE Alu 5 297 -15 942 269 119 66 chr5 11507621 11507669 -191577863 - MLT1L LTR MaLR -505 110 1 2236 54 14 4 chr5 11507774 11508052 -191577480 - AluY SINE Alu -30 281 1 259 341 11 21 chr5 11508994 11509112 -191576420 - MER5B DNA MER1_type -4 174 65 1461 217 45 12 chr5 11509174 11509511 -191576021 + MER7A DNA MER2_type 1 346 0 451 182 96 13 chr5 11510096 11510259 -191575273 - L1 LINE L1 -2326 3820 3650 6259 153 20 11 chr5 11510259 11511262 -191574270 - ERVL LTR ERVL -3179 2585 1574 677 245 23 54 chr5 11511267 11511533 -191573999 - MER4C LTR ERV1 -2 695 273 2238 102 0 0 chr5 11511554 11511837 -191573695 + AluSq SINE Alu 1 283 -30 515 328 123 26 chr5 11512541 11513086 -191572446 + L2 LINE L2 1404 2001 -1313 1945 139 10 26 chr5 11513095 11513405 -191572127 + AluJb SINE Alu 1 305 -7 1647 152 16 70 chr5 11513548 11513864 -191571668 - AluJb SINE Alu -7 305 7 432 328 38 21 chr5 11513867 11514105 -191571427 + L2 LINE L2 2306 2547 -767 1110 174 104 14 chr5 11514111 11514323 -191571209 - MER8 DNA MER2_type -1 238 8 2005 95 12 67 chr5 11514353 11514680 -191570852 - AluSx SINE Alu 0 312 4 853 111 14 14 chr5 11514692 11514836 -191570696 - AluYb8 SINE Alu 0 318 175 975 216 183 30 chr5 11515315 11515643 -191569889 + LTR33 LTR ERVL 1 378 -143 1839 153 24 20 chr5 11515715 11516010 -191569522 - AluJb SINE Alu -16 296 1 192 315 22 34 chr5 11516274 11516363 -191569169 - MIR SINE MIR -105 103 16 525 227 108 35 chr5 11516635 11516838 -191568694 + MIR SINE MIR 19 236 -26 2098 131 0 19 chr5 11516848 11517162 -191568370 + AluSx SINE Alu 1 308 -4 237 129 32 16 chr5 11518503 11518565 -191566967 + (CAT)n Simple_repeat Simple_repeat 1 63 0 236 269 73 91 chr5 11518568 11518691 -191566841 - MIR SINE MIR -12 250 131 2304 99 3 0 chr5 11518691 11518983 -191566549 + AluSp SINE Alu 2 294 -19 236 269 73 91 chr5 11518983 11519078 -191566454 - MIR SINE MIR -131 131 36 941 99 19 6 chr5 11519116 11519278 -191566254 + (TTTC)n Simple_repeat Simple_repeat 3 166 0 546 167 10 10 chr5 11519562 11519658 -191565874 + Tigger7 DNA MER2_type 2392 2487 0 545 252 132 6 chr5 11519658 11519815 -191565717 + MLT1J2 LTR MaLR 198 374 -76 2100 121 0 0 chr5 11519816 11520098 -191565434 - AluSx SINE Alu -17 295 14 2464 91 0 7 chr5 11521540 11521849 -191563683 - AluSg SINE Alu -3 307 1 2126 121 3 13 chr5 11522313 11522618 -191562914 - AluSq SINE Alu -5 308 7 519 106 0 0 chr5 11522748 11522814 -191562718 + U6 snRNA snRNA 41 106 -1 21 0 0 0 chr5 11522814 11522835 -191562697 + AT_rich Low_complexity Low_complexity 1 21 0 2065 123 3 0 chr5 11522896 11523217 -191562315 + AluSq SINE Alu 1 322 0 234 262 0 0 chr5 11524222 11524306 -191561226 + A-rich Low_complexity Low_complexity 1 84 0 7410 189 71 28 chr5 11524839 11526319 -191559213 - ERVL LTR ERVL -4168 1596 54 346 232 14 106 chr5 11526478 11526620 -191558912 - L2 LINE L2 -1 3312 3184 918 254 29 55 chr5 11526621 11526896 -191558636 - LTR16C LTR ERVL 0 491 224 294 106 0 0 chr5 11528303 11528350 -191557182 + (TG)n Simple_repeat Simple_repeat 1 47 0 23 86 0 0 chr5 11528997 11529055 -191556477 + AT_rich Low_complexity Low_complexity 1 58 0 345 82 0 0 chr5 11529364 11529413 -191556119 + (TG)n Simple_repeat Simple_repeat 1 49 0 603 272 55 32 chr5 11529913 11530130 -191555402 + MIR SINE MIR 20 241 -21 313 282 104 49 chr5 11530636 11530671 -191554861 - MER5B DNA MER1_type -3 175 143 2290 92 7 0 chr5 11530671 11530966 -191554566 + AluSc SINE Alu 1 297 -12 313 282 104 49 chr5 11530966 11531093 -191554439 - MER5B DNA MER1_type -35 143 4 238 259 15 118 chr5 11531094 11531229 -191554303 - MIR3 SINE MIR -46 162 42 347 273 23 30 chr5 11531464 11531596 -191553936 + MIR SINE MIR 52 182 -80 217 317 52 71 chr5 11532195 11532504 -191553028 + L2 LINE L2 2599 2901 -413 2420 53 0 26 chr5 11532528 11532832 -191552700 - AluY SINE Alu -15 296 1 2041 137 0 10 chr5 11533205 11533505 -191552027 - AluSx SINE Alu -13 299 3 2303 48 19 63 chr5 11534694 11535010 -191550522 + AluY SINE Alu 1 302 -9 2276 112 0 10 chr5 11535490 11535793 -191549739 - AluSx SINE Alu -12 300 1 2168 130 0 16 chr5 11535806 11536121 -191549411 - AluSx SINE Alu -2 310 1 328 208 111 0 chr5 11536601 11536673 -191548859 + MER58 DNA MER1_type 11 90 -125 2599 65 0 7 chr5 11536697 11537006 -191548526 + AluSp SINE Alu 1 307 -6 569 163 61 7 chr5 11537059 11537206 -191548326 + L1M4 LINE L1 5119 5273 -873 454 290 58 8 chr5 11537383 11537557 -191547975 + MIR SINE MIR 37 217 -45 475 123 123 12 chr5 11537822 11537903 -191547629 + 5S rRNA rRNA 1 90 -31 2189 99 20 3 chr5 11538089 11538381 -191547151 + AluSx SINE Alu 1 297 -15 406 274 60 0 chr5 11538401 11538518 -191547014 - L2 LINE L2 0 3313 3190 38 0 0 0 chr5 11538625 11538663 -191546869 + AT_rich Low_complexity Low_complexity 1 38 0 183 268 0 0 chr5 11539006 11539047 -191546485 + MIR SINE MIR 108 148 -60 1523 253 72 5 chr5 11539070 11539461 -191546071 - MLT1J2 LTR MaLR -18 432 16 198 311 14 0 chr5 11539472 11539546 -191545986 + MIR SINE MIR 152 226 -36 256 286 31 76 chr5 11539946 11540170 -191545362 + L2 LINE L2 2662 2875 -439 215 240 231 39 chr5 11540166 11540270 -191545262 - L2 LINE L2 0 3313 3190 * 355 317 44 28 chr5 11540408 11540588 -191544944 + L2 LINE L2 3120 3302 -11 225 65 0 0 chr5 11540588 11540619 -191544913 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 183 277 15 15 chr5 11542204 11542269 -191543263 - MER5A DNA MER1_type -7 182 118 2235 106 0 20 chr5 11542321 11542623 -191542909 - AluSg SINE Alu -14 296 1 850 204 74 6 chr5 11542928 11543090 -191542442 - MER21B LTR ERV1 -364 499 327 512 259 15 7 chr5 11543133 11543268 -191542264 - MER5B DNA MER1_type 0 178 43 835 250 37 14 chr5 11543270 11543486 -191542046 + AluJo SINE Alu 1 221 -91 268 98 0 59 chr5 11543486 11543537 -191541995 + FLAM_A SINE Alu 86 133 0 186 43 0 0 chr5 11543560 11543583 -191541949 + (CA)n Simple_repeat Simple_repeat 2 24 0 2018 149 0 0 chr5 11543603 11543892 -191541640 - AluSx SINE Alu -23 289 1 182 191 0 143 chr5 11543900 11543963 -191541569 + MER5B DNA MER1_type 124 177 -1 200 269 0 0 chr5 11544068 11544120 -191541412 - L2 LINE L2 0 3313 3262 1205 156 39 15 chr5 11544678 11544883 -191540649 - AluJo SINE Alu -102 210 1 2028 122 7 0 chr5 11545576 11545878 -191539654 - AluSx SINE Alu 0 308 5 222 37 0 0 chr5 11547117 11547144 -191538388 + (T)n Simple_repeat Simple_repeat 1 27 0 1501 123 0 14 chr5 11547239 11547458 -191538074 - AluSq SINE Alu -97 216 1 389 244 154 32 chr5 11547691 11547847 -191537685 - MIR SINE MIR -38 224 50 593 179 222 12 chr5 11547979 11548141 -191537391 - MIR SINE MIR 0 262 67 227 185 0 19 chr5 11548730 11548768 -191536764 + CT-rich Low_complexity Low_complexity 2 40 -14 2336 80 10 22 chr5 11548768 11549081 -191536451 - AluSp SINE Alu -4 309 1 227 185 0 19 chr5 11549081 11549096 -191536436 + CT-rich Low_complexity Low_complexity 40 54 0 1595 173 11 4 chr5 11549097 11549369 -191536163 - AluJo SINE Alu -38 274 1 1868 137 0 18 chr5 11549399 11549676 -191535856 + AluJo SINE Alu 11 282 -30 387 0 0 0 chr5 11549679 11549722 -191535810 + (CAA)n Simple_repeat Simple_repeat 2 44 0 273 179 30 45 chr5 11550148 11550215 -191535317 + L3 LINE CR1 1493 1558 -19 2334 71 0 3 chr5 11550791 11551099 -191534433 + AluY SINE Alu 1 307 0 1703 152 27 17 chr5 11551300 11551596 -191533936 + AluJo SINE Alu 2 300 -12 458 243 104 107 chr5 11551741 11552021 -191533511 - L1MC4 LINE L1 -17 8025 7648 1322 146 5 24 chr5 11552021 11552234 -191533298 + AluJb SINE Alu 85 293 -19 2255 107 17 0 chr5 11552267 11552566 -191532966 + AluJb SINE Alu 1 304 -8 1076 93 0 0 chr5 11552850 11552990 -191532542 - AluSp/q SINE Alu -2 311 172 2067 132 3 0 chr5 11553948 11554236 -191531296 - AluSx SINE Alu -23 289 1 21 36 0 0 chr5 11555670 11555698 -191529834 + AT_rich Low_complexity Low_complexity 1 28 0 25 31 0 0 chr5 11556216 11556248 -191529284 + AT_rich Low_complexity Low_complexity 1 32 0 1590 162 40 7 chr5 11557862 11558134 -191527398 + AluJb SINE Alu 9 289 -23 1462 177 85 0 chr5 11558144 11558415 -191527117 + AluJo SINE Alu 1 294 -18 1951 102 60 11 chr5 11558421 11558704 -191526828 + AluSx SINE Alu 1 297 -15 27 51 0 17 chr5 11558707 11558726 -191526806 + AT_rich Low_complexity Low_complexity 1 19 -39 1736 149 73 3 chr5 11558726 11559015 -191526517 + AluSx SINE Alu 1 309 -3 27 51 0 17 chr5 11559015 11559054 -191526478 + AT_rich Low_complexity Low_complexity 19 58 0 203 302 47 0 chr5 11560824 11560930 -191524602 + (CATA)n Simple_repeat Simple_repeat 4 114 0 345 296 96 7 chr5 11560961 11561096 -191524436 - MIR SINE MIR -51 211 65 221 328 90 25 chr5 11561813 11561935 -191523597 - MIR SINE MIR -110 152 23 1040 150 0 72 chr5 11563512 11563705 -191521827 - AluJb SINE Alu -3 309 131 31 44 0 0 chr5 11563764 11563809 -191521723 + AT_rich Low_complexity Low_complexity 1 45 0 303 180 0 0 chr5 11563848 11563898 -191521634 - Alu SINE Alu -253 50 1 186 138 35 0 chr5 11565169 11565198 -191520334 + L2 LINE L2 3184 3213 -100 2423 102 30 24 chr5 11566079 11566452 -191519080 + THE1C LTR MaLR 1 375 0 2198 103 40 0 chr5 11568474 11568774 -191516758 + AluSx SINE Alu 1 312 0 242 287 101 23 chr5 11569307 11569436 -191516096 - L1ME LINE L1 -413 5740 5602 330 278 124 43 chr5 11569463 11569672 -191515860 + L1MC/D LINE L1 5316 5541 -2267 514 301 115 27 chr5 11570009 11570524 -191515008 - L1ME LINE L1 -1881 4248 3689 775 146 33 33 chr5 11570657 11570808 -191514724 + MLT1C LTR MaLR 1 151 -316 909 294 178 12 chr5 11570911 11571483 -191514049 + HAL1 LINE L1 114 780 -1727 2848 193 72 23 chr5 11571726 11572411 -191513121 + L1MB7 LINE L1 5459 6176 -8 549 264 80 41 chr5 11572415 11572979 -191512553 + HAL1 LINE L1 1091 1708 -799 450 295 8 76 chr5 11573311 11573548 -191511984 + MIR SINE MIR 27 247 -15 362 248 218 34 chr5 11573576 11573810 -191511722 + HAL1 LINE L1 2035 2311 -196 236 305 81 29 chr5 11574342 11574516 -191511016 - L1ME LINE L1 -4938 1181 999 443 366 41 53 chr5 11575909 11576321 -191509211 - L2 LINE L2 0 3272 2866 551 217 95 13 chr5 11576639 11576794 -191508738 - L1MD3 LINE L1 0 8040 7881 361 303 192 4 chr5 11576787 11577021 -191508511 - L1MC4 LINE L1 -191 7851 7574 * 414 207 36 45 chr5 11577054 11577099 -191508433 + MER20 DNA MER1_type 31 75 -144 2885 183 74 13 chr5 11577099 11577628 -191507904 - MER68 LTR ERV1 -1 561 1 414 207 36 45 chr5 11577628 11577693 -191507839 + MER20 DNA MER1_type 75 140 -79 1774 179 0 16 chr5 11578263 11578576 -191506956 + AluJo SINE Alu 3 310 -2 181 109 43 0 chr5 11578984 11579030 -191506502 + T-rich Low_complexity Low_complexity 3 50 0 835 254 96 35 chr5 11581500 11581976 -191503556 + MER110A LTR ERV1 1 486 0 1932 196 78 43 chr5 11582170 11582654 -191502878 + MLT1D LTR MaLR 2 502 -3 419 272 0 26 chr5 11582693 11582807 -191502725 + MIR SINE MIR 152 262 0 1939 166 103 70 chr5 11583336 11583782 -191501750 - MLT2C2 LTR ERVL 0 464 4 1752 185 0 3 chr5 11583915 11584223 -191501309 - AluJo SINE Alu -5 307 1 309 289 85 69 chr5 11586592 11586852 -191498680 - ERVL LTR ERVL -5148 616 353 703 164 15 52 chr5 11587156 11587316 -191498216 + L1MA7 LINE L1 5859 6016 -165 1435 126 18 22 chr5 11587316 11587536 -191497996 + L1PB4 LINE L1 5928 6149 -7 1308 178 36 14 chr5 11587536 11587807 -191497725 + L1MA7 LINE L1 6008 6288 -3 2357 97 3 0 chr5 11588671 11588969 -191496563 - AluSp SINE Alu -14 299 1 1003 169 0 0 chr5 11589019 11589167 -191496365 - AluJb SINE Alu -33 279 132 288 291 39 39 chr5 11589369 11589496 -191496036 + L2 LINE L2 3186 3312 -1 598 224 161 98 chr5 11589750 11590085 -191495447 + LTR18A LTR ERVL 1 356 -1 238 318 111 35 chr5 11590129 11590390 -191495142 + MLT1K LTR MaLR 99 379 -209 22 35 0 0 chr5 11590852 11590881 -191494651 + AT_rich Low_complexity Low_complexity 1 29 0 207 0 0 0 chr5 11590924 11590947 -191494585 + (T)n Simple_repeat Simple_repeat 1 23 0 1093 211 126 38 chr5 11591112 11591182 -191494350 + MSTC LTR MaLR 10 72 -356 1928 149 3 31 chr5 11591182 11591504 -191494028 + AluSq SINE Alu 1 313 0 1093 211 126 38 chr5 11591504 11591750 -191493782 + MSTC LTR MaLR 72 354 -74 1422 222 19 134 chr5 11592090 11592639 -191492893 - L1ME1 LINE L1 -3 6163 5697 2084 142 3 0 chr5 11592639 11592935 -191492597 - AluSx SINE Alu -15 297 1 1422 222 19 134 chr5 11592935 11593028 -191492504 - L1ME1 LINE L1 -469 5697 5595 7158 75 8 4 chr5 11593028 11594943 -191490589 + L1PA8 LINE L1 4310 6163 -9 622 200 100 6 chr5 11594985 11595145 -191490387 + L1ME LINE L1 5406 5580 -586 277 350 77 0 chr5 11595159 11595342 -191490190 + L2 LINE L2 2550 2746 -568 2338 77 3 10 chr5 11595774 11596073 -191489459 - AluSg SINE Alu -13 297 1 696 226 83 0 chr5 11596771 11596939 -191488593 + MER58B DNA MER1_type 160 341 0 734 251 127 41 chr5 11596944 11597211 -191488321 - L2 LINE L2 -616 2698 2409 796 275 116 37 chr5 11597231 11597781 -191487751 + L2 LINE L2 2702 3309 -4 332 331 126 24 chr5 11597999 11598286 -191487246 + L2 LINE L2 2757 3069 -244 25 0 0 0 chr5 11599203 11599228 -191486304 + GC_rich Low_complexity Low_complexity 1 25 0 312 127 0 0 chr5 11599569 11599624 -191485908 + (CCCCG)n Simple_repeat Simple_repeat 5 59 0 497 245 126 0 chr5 11601607 11601758 -191483774 - MER58C DNA MER1_type 0 215 46 1379 140 26 0 chr5 11603990 11604218 -191481314 - MER50 LTR ERV1 -500 234 1 206 231 96 0 chr5 11604219 11604271 -191481261 + MIR3 SINE MIR 150 206 -2 462 18 0 0 chr5 11606297 11606352 -191479180 + (TG)n Simple_repeat Simple_repeat 2 56 0 1861 124 0 89 chr5 11607702 11608017 -191477515 + AluSx SINE Alu 26 312 0 2510 127 6 3 chr5 11608508 11608871 -191476661 + THE1B LTR MaLR 1 364 0 879 189 39 149 chr5 11609694 11610472 -191475060 + MER4C LTR ERV1 1 465 0 270 0 0 0 chr5 11611885 11611915 -191473617 + (CA)n Simple_repeat Simple_repeat 2 31 0 887 172 60 142 chr5 11613434 11613765 -191471767 + MLT1A1 LTR MaLR 20 323 -42 198 286 0 16 chr5 11614088 11614151 -191471381 + L2 LINE L2 2979 3040 -232 798 238 14 43 chr5 11614315 11614525 -191471007 + MER3 DNA MER1_type 6 209 0 390 321 42 31 chr5 11614927 11615120 -191470412 - L2 LINE L2 -497 2817 2623 2094 192 116 63 chr5 11617016 11617604 -191467928 + MLT1E3 LTR MaLR 1 619 -5 315 232 0 43 chr5 11618042 11618111 -191467421 - MER103 DNA DNA -78 88 23 183 129 0 0 chr5 11618165 11618196 -191467336 - MER5C DNA MER1_type -289 35 5 262 282 64 18 chr5 11618662 11618772 -191466760 + L1M4 LINE L1 4741 4855 -1291 293 239 95 23 chr5 11619056 11619308 -191466224 + L1M1 LINE L1 5192 5479 -701 471 237 8 8 chr5 11619714 11619832 -191465700 + LTR37B LTR ERV1 351 468 0 2394 76 0 3 chr5 11619939 11620243 -191465289 + AluY SINE Alu 1 303 -8 863 237 28 14 chr5 11620309 11620524 -191465008 + MER20 DNA MER1_type 1 218 -1 624 222 6 56 chr5 11622046 11622208 -191463324 - MER20 DNA MER1_type -6 213 60 981 253 177 59 chr5 11622626 11622892 -191462640 + MLT1E LTR MaLR 25 258 -335 2083 128 35 64 chr5 11622892 11623267 -191462265 + THE1B LTR MaLR 1 364 0 981 253 177 59 chr5 11623267 11623509 -191462023 + MLT1E LTR MaLR 258 593 0 1175 262 26 12 chr5 11623659 11624002 -191461530 + MER90 LTR ERV1 29 376 -199 2053 163 46 37 chr5 11624009 11624563 -191460969 - MLT2A2 LTR ERVL 0 554 1 458 266 35 74 chr5 11624564 11624767 -191460765 + MER90 LTR ERV1 420 614 0 440 292 9 0 chr5 11725823 11725936 -191359596 + MER81 DNA DNA 1 114 0 1024 277 140 69 chr5 11726620 11727481 -191358051 + HAL1 LINE L1 839 1596 -911 447 203 109 31 chr5 11728022 11728150 -191357382 + L2 LINE L2 3172 3309 -4 554 284 98 82 chr5 11728178 11728656 -191356876 + HAL1 LINE L1 2007 2492 -15 1569 193 3 23 chr5 11728766 11729071 -191356461 - AluJo SINE Alu -13 299 1 1096 307 98 46 chr5 11730421 11730606 -191354926 + L1MEc LINE L1 2115 2289 -3926 2076 119 7 0 chr5 11730606 11730900 -191354632 + AluSx SINE Alu 1 296 -16 1096 307 98 46 chr5 11730900 11731576 -191353956 + L1MEc LINE L1 2289 2977 -3238 302 263 12 25 chr5 11731989 11732069 -191353463 + L1MC4 LINE L1 6625 6703 -1339 * 316 194 0 56 chr5 11732052 11732124 -191353408 - L1MCa LINE L1 -4362 2064 1997 3076 165 29 8 chr5 11732143 11732731 -191352801 + L1MC1 LINE L1 5734 6333 0 1401 161 56 21 chr5 11733235 11733521 -191352011 - AluJb SINE Alu -16 296 1 541 250 12 54 chr5 11734044 11734100 -191351432 - MER45A DNA AcHobo -1420 161 104 2404 59 0 13 chr5 11734100 11734405 -191351127 + AluY SINE Alu 1 301 -10 541 250 12 54 chr5 11734405 11734516 -191351016 - MER45A DNA AcHobo -1477 104 1 206 288 119 8 chr5 11738203 11738321 -191347211 - L2 LINE L2 -2523 791 661 281 289 0 0 chr5 11738676 11738752 -191346780 - MIR SINE MIR -110 152 77 195 360 13 0 chr5 11738804 11738879 -191346653 - L2 LINE L2 -13 3300 3225 4012 161 18 60 chr5 11738889 11739708 -191345824 + LTR1 LTR ERV1 1 785 0 261 0 0 0 chr5 11740736 11740765 -191344767 + (CA)n Simple_repeat Simple_repeat 1 29 0 2561 174 47 19 chr5 11741031 11741559 -191343973 + MER67A LTR ERV1 1 543 0 630 183 215 5 chr5 11742447 11742607 -191342925 + LTR28 LTR ERV1 1 139 -286 312 197 14 0 chr5 11742618 11742689 -191342843 + LTR1 LTR ERV1 119 190 -595 * 3140 179 129 16 chr5 11742658 11743295 -191342237 + LTR28 LTR ERV1 308 1016 -4 206 178 22 0 chr5 11743330 11743375 -191342157 - MIR SINE MIR -70 138 93 293 204 0 107 chr5 11744292 11744395 -191341137 + HsTC2 DNA Tc2 5 96 -1802 1253 179 31 0 chr5 11744752 11745009 -191340523 + L1MB3 LINE L1 5919 6183 0 1800 101 12 0 chr5 11745012 11745270 -191340262 + AluSc SINE Alu 36 296 -13 1515 180 11 7 chr5 11745322 11745606 -191339926 + AluJb SINE Alu 1 285 -27 2845 121 27 16 chr5 11746892 11747340 -191338192 + MER4C LTR ERV1 5 457 -8 261 139 0 0 chr5 11747909 11747952 -191337580 + (CATATA)n Simple_repeat Simple_repeat 5 47 0 683 273 6 27 chr5 11748215 11748398 -191337134 - MER5A DNA MER1_type -4 185 7 1442 273 83 53 chr5 11748507 11749112 -191336420 + MER21B LTR ERV1 189 811 -52 269 170 21 85 chr5 11749210 11749304 -191336228 + (CATTG)n Simple_repeat Simple_repeat 1 88 0 616 277 15 29 chr5 11750411 11750606 -191334926 - MER20B DNA MER1_type -17 202 7 314 293 61 24 chr5 11750700 11750968 -191334564 + L1 LINE L1 2888 3163 -2983 268 245 60 119 chr5 11751007 11751158 -191334374 + LTR33A LTR ERVL 21 162 -361 305 200 0 15 chr5 11751397 11751462 -191334070 + LTR33A LTR ERVL 442 505 -18 248 235 0 0 chr5 11751461 11751512 -191334020 + LTR33A LTR ERVL 473 523 0 * 32 26 0 0 chr5 11751625 11751664 -191333868 + AT_rich Low_complexity Low_complexity 1 39 0 320 281 63 37 chr5 11751904 11752210 -191333322 + L1 LINE L1 3687 3999 -2147 239 293 0 0 chr5 11752218 11752293 -191333239 + (TATATG)n Simple_repeat Simple_repeat 4 78 0 28 29 0 0 chr5 11752349 11752384 -191333148 + AT_rich Low_complexity Low_complexity 1 35 0 674 113 0 10 chr5 11753150 11753247 -191332285 + MER4A LTR ERV1 1 96 -568 2715 107 12 12 chr5 11753248 11753650 -191331882 + MER4A LTR ERV1 263 664 0 2284 51 24 0 chr5 11754607 11754899 -191330633 + AluY SINE Alu 1 299 -12 645 161 0 8 chr5 11754900 11755018 -191330514 - MER5A DNA MER1_type -54 135 19 360 0 0 0 chr5 11756018 11756058 -191329474 + (CA)n Simple_repeat Simple_repeat 1 40 0 2149 207 153 56 chr5 11756512 11757359 -191328173 + LTR1B LTR ERV1 1 826 0 445 220 164 95 chr5 11757627 11757859 -191327673 + MLT2B1 LTR ERVL 265 512 -8 372 318 48 16 chr5 11759518 11759707 -191325825 + L3 LINE CR1 753 947 -630 180 111 0 0 chr5 11760230 11760257 -191325275 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 23 0 0 0 chr5 11763677 11763700 -191321832 + AT_rich Low_complexity Low_complexity 1 23 0 355 131 0 0 chr5 11765010 11765071 -191320461 - L1MA4 LINE L1 -5 6295 6235 198 339 0 0 chr5 11765711 11765776 -191319756 + MIR3 SINE MIR 144 208 0 197 162 0 27 chr5 11767741 11767778 -191317754 - L2 LINE L2 -10 3303 3268 707 227 54 125 chr5 11768198 11768550 -191316982 - MER46C DNA MER2_type -5 333 7 295 317 49 28 chr5 11768644 11768786 -191316746 - MIR3 SINE MIR -28 180 36 276 279 60 117 chr5 11769323 11769656 -191315876 + L2 LINE L2 2958 3271 -1 317 95 0 0 chr5 11770035 11770077 -191315455 + L2 LINE L2 3261 3302 -11 194 293 0 52 chr5 11770334 11770392 -191315140 - L3 LINE CR1 -123 1454 1400 2169 139 0 3 chr5 11771869 11772171 -191313361 - AluSc SINE Alu -8 301 1 4732 112 4 8 chr5 11772715 11773428 -191312104 + L1PA13 LINE L1 5452 6161 -2 2326 97 3 0 chr5 11773858 11774158 -191311374 + AluSx SINE Alu 1 301 -11 973 259 79 36 chr5 11776106 11776716 -191308816 - L1MC5 LINE L1 -36 7925 7290 451 281 6 11 chr5 11776850 11777028 -191308504 - L1MC5 LINE L1 -733 7228 7052 244 211 33 22 chr5 11777094 11777184 -191308348 - L1MC4 LINE L1 -1098 6944 6854 3796 77 10 27 chr5 11777194 11777428 -191308104 - LTR10C LTR ERV1 -37 596 360 2829 13 0 0 chr5 11777428 11777741 -191307791 - AluYb8 SINE Alu -5 313 1 3796 77 10 27 chr5 11777741 11778087 -191307445 - LTR10C LTR ERV1 -273 360 1 282 233 26 86 chr5 11778095 11778211 -191307321 - L1MC5 LINE L1 -1191 6770 6662 23 33 0 0 chr5 11778237 11778267 -191307265 + AT_rich Low_complexity Low_complexity 1 30 0 672 250 75 4 chr5 11778722 11778950 -191306582 - L1MC5 LINE L1 -1866 5942 5699 337 115 0 0 chr5 11778958 11779010 -191306522 - MADE1 DNA Mariner 0 80 29 315 0 0 0 chr5 11779209 11779244 -191306288 + (CA)n Simple_repeat Simple_repeat 2 36 0 214 290 105 9 chr5 11779521 11779753 -191305779 + MIR3 SINE MIR 4 256 -6 2388 111 6 6 chr5 11780216 11780566 -191304966 + THE1B LTR MaLR 3 352 -12 887 201 8 72 chr5 11780575 11780838 -191304694 + MER4A LTR ERV1 1 246 -418 525 253 28 75 chr5 11780863 11781131 -191304401 + MER4C LTR ERV1 208 290 -175 2095 114 3 13 chr5 11781131 11781430 -191304102 - AluSc SINE Alu -13 296 1 525 253 28 75 chr5 11781430 11781599 -191303933 + MER4C LTR ERV1 290 465 0 189 304 89 13 chr5 11781600 11781679 -191303853 + MIR SINE MIR 58 142 -66 2298 88 7 3 chr5 11782161 11782457 -191303075 + AluSg SINE Alu 1 297 -13 26 101 0 0 chr5 11782953 11783042 -191302490 + AT_rich Low_complexity Low_complexity 1 89 0 1813 156 21 15 chr5 11783091 11783419 -191302113 - L1PA16 LINE L1 0 6166 5837 33 73 0 0 chr5 11784165 11784233 -191301299 + AT_rich Low_complexity Low_complexity 1 68 0 410 65 16 0 chr5 11784390 11784452 -191301080 + (TCCA)n Simple_repeat Simple_repeat 2 64 0 214 267 58 33 chr5 11785979 11786099 -191299433 + MIR SINE MIR 118 240 -22 2447 73 3 0 chr5 11786290 11786591 -191298941 + AluY SINE Alu 1 302 -9 1636 191 36 25 chr5 11787256 11787592 -191297940 + L1MA4 LINE L1 5896 6238 -62 3168 201 27 60 chr5 11787592 11788446 -191297086 + LTR1B LTR ERV1 1 826 0 1636 191 36 25 chr5 11788446 11788502 -191297030 + L1MA4 LINE L1 6238 6292 -8 350 237 10 9 chr5 11789224 11789334 -191296198 + L1PB1 LINE L1 4985 5094 -1052 2793 19 27 0 chr5 11789335 11789701 -191295831 - L1P LINE L1 -944 5202 4827 * 3876 11 0 0 chr5 11789679 11790138 -191295394 + L1PA2 LINE L1 5693 6151 -4 3514 113 40 3 chr5 11790150 11790843 -191294689 + L1PB1 LINE L1 5083 5791 -360 308 202 32 75 chr5 11790856 11790950 -191294582 - L1MC4 LINE L1 -1339 6703 6614 190 130 0 43 chr5 11790953 11790999 -191294533 + (CATATA)n Simple_repeat Simple_repeat 6 49 0 2129 140 22 8 chr5 11791005 11791019 -191294513 + L1PB1 LINE L1 5782 5794 -357 194 88 0 29 chr5 11791019 11791053 -191294479 + (TA)n Simple_repeat Simple_repeat 2 34 0 2129 140 22 8 chr5 11791053 11791402 -191294130 + L1PB1 LINE L1 5794 6150 -1 282 216 41 21 chr5 11791528 11791625 -191293907 + (CATATA)n Simple_repeat Simple_repeat 1 99 0 1717 147 38 42 chr5 11792044 11792357 -191293175 + AluSx SINE Alu 1 312 0 260 332 39 19 chr5 11792560 11792768 -191292764 + L1ME3A LINE L1 114 325 -6071 212 128 21 21 chr5 11793189 11793236 -191292296 + (TATAA)n Simple_repeat Simple_repeat 2 48 0 3210 261 75 45 chr5 11793373 11794302 -191291230 + L1ME3A LINE L1 1624 2524 -3691 1806 63 14 5 chr5 11794302 11794558 -191290974 + AluY SINE Alu 60 317 0 3210 261 75 45 chr5 11794558 11796079 -191289453 + L1ME3A LINE L1 2524 4117 -2098 444 278 47 21 chr5 11796124 11796358 -191289174 + L1ME2 LINE L1 5924 6163 -1 5922 215 43 28 chr5 11798600 11799967 -191285565 + L1MC/D LINE L1 3524 4869 -1440 2193 124 0 16 chr5 11799967 11800282 -191285250 + AluSx SINE Alu 2 311 -1 5922 215 43 28 chr5 11800282 11800300 -191285232 + L1MC/D LINE L1 4869 4885 -1424 2771 7 0 0 chr5 11800300 11800603 -191284929 - AluYa5 SINE Alu -8 303 1 5922 215 43 28 chr5 11800603 11801219 -191284313 + L1MC/D LINE L1 4885 5566 -743 420 266 73 78 chr5 11801278 11801635 -191283897 + L1ME3A LINE L1 4999 5353 -862 1031 263 163 48 chr5 11801673 11802427 -191283105 + L1ME3A LINE L1 5391 6231 -8 307 269 74 28 chr5 11802504 11802612 -191282920 - MIR3 SINE MIR -8 200 88 24 0 0 0 chr5 11804355 11804379 -191281153 + AT_rich Low_complexity Low_complexity 1 24 0 485 167 9 26 chr5 11805092 11805206 -191280326 + L1MA10 LINE L1 6223 6334 0 37 39 0 0 chr5 11805353 11805404 -191280128 + AT_rich Low_complexity Low_complexity 1 51 0 420 226 189 6 chr5 11805553 11805717 -191279815 + MLT1J2 LTR MaLR 190 383 -67 332 124 22 45 chr5 11806004 11806093 -191279439 + GA-rich Low_complexity Low_complexity 2 88 0 180 0 0 0 chr5 11806620 11806640 -191278892 + (GA)n Simple_repeat Simple_repeat 1 20 0 407 310 44 44 chr5 11806958 11807116 -191278416 + MER5A DNA MER1_type 30 187 -2 207 340 30 0 chr5 11808053 11808153 -191277379 - MIR SINE MIR -1 261 159 219 279 38 56 chr5 11808740 11808910 -191276622 - MER5B DNA MER1_type -7 182 2 203 333 93 47 chr5 11809198 11809327 -191276205 + L2 LINE L2 3137 3271 -1 528 268 39 15 chr5 11809787 11809950 -191275582 + MIR SINE MIR 3 167 -58 2077 106 0 45 chr5 11810490 11810802 -191274730 - AluSg1 SINE Alu -11 298 1 227 267 0 0 chr5 11812387 11812432 -191273100 + (CTA)n Simple_repeat Simple_repeat 2 46 0 2001 139 10 3 chr5 11812630 11812925 -191272607 - AluJb SINE Alu -15 297 1 225 0 0 0 chr5 11813583 11813608 -191271924 + (CA)n Simple_repeat Simple_repeat 1 25 0 22 35 0 0 chr5 11813725 11813754 -191271778 + AT_rich Low_complexity Low_complexity 1 29 0 1205 197 9 0 chr5 11814548 11814771 -191270761 + AluJb SINE Alu 86 310 -2 2321 216 70 4 chr5 11815457 11815984 -191269548 - MER68 LTR ERV1 0 562 1 248 326 167 8 chr5 11818079 11818211 -191267321 - MIR3 SINE MIR -46 162 10 21 36 0 0 chr5 11820054 11820082 -191265450 + AT_rich Low_complexity Low_complexity 1 28 0 306 0 0 0 chr5 11820411 11820445 -191265087 + (CA)n Simple_repeat Simple_repeat 2 35 0 186 333 63 56 chr5 11821727 11821853 -191263679 - MIR SINE MIR -122 140 14 209 220 0 20 chr5 11822947 11822997 -191262535 + (CA)n Simple_repeat Simple_repeat 2 50 0 221 301 14 14 chr5 11823676 11823749 -191261783 - L2 LINE L2 -1 3271 3199 280 405 7 0 chr5 11825891 11826039 -191259493 - MIR SINE MIR -109 153 5 345 279 78 23 chr5 11827469 11827646 -191257886 + MIR SINE MIR 4 187 -73 7421 164 36 13 chr5 11830636 11831914 -191253618 + L1M1 LINE L1 14 1320 -6245 * 11028 151 29 23 chr5 11831913 11832995 -191252537 + L1M1 LINE L1 2252 3325 -4240 2317 65 0 0 chr5 11832995 11833272 -191252260 + AluY SINE Alu 22 298 -13 11028 151 29 23 chr5 11833272 11835791 -191249741 + L1M1 LINE L1 3325 5887 -1678 2921 129 50 58 chr5 11835771 11836069 -191249463 + L1M1 LINE L1 6453 6752 -972 * 2212 113 7 0 chr5 11836069 11836378 -191249154 + AluSp SINE Alu 1 311 -2 2921 129 50 58 chr5 11836378 11836812 -191248720 + L1M1 LINE L1 6752 7197 -527 233 174 0 29 chr5 11837965 11838034 -191247498 + (TATAA)n Simple_repeat Simple_repeat 1 67 0 342 113 68 0 chr5 11838039 11838172 -191247360 + (TA)n Simple_repeat Simple_repeat 1 142 0 35 0 0 0 chr5 11838172 11838207 -191247325 + AT_rich Low_complexity Low_complexity 1 35 0 297 0 0 0 chr5 11838361 11838394 -191247138 + (TAA)n Simple_repeat Simple_repeat 2 34 0 473 196 0 59 chr5 11838738 11838840 -191246692 - MER3 DNA MER1_type -1 208 113 458 191 159 48 chr5 11838845 11838971 -191246561 - MER3 DNA MER1_type -26 183 44 533 319 14 93 chr5 11839454 11839871 -191245661 - L2 LINE L2 -1 3312 2929 414 85 0 0 chr5 11840444 11840503 -191245029 + (TG)n Simple_repeat Simple_repeat 1 59 0 551 261 84 51 chr5 11841348 11841659 -191243873 + L1MD2 LINE L1 5702 6022 -337 * 1340 234 75 7 chr5 11841388 11841802 -191243730 + L1MB8 LINE L1 5737 6178 0 2148 82 0 0 chr5 11841814 11842081 -191243451 + AluY SINE Alu 44 310 -1 334 64 21 0 chr5 11843381 11843428 -191242104 - THE1C LTR MaLR -322 53 6 442 81 0 27 chr5 11843955 11844029 -191241503 + (TCTCC)n Simple_repeat Simple_repeat 2 73 0 284 304 71 76 chr5 11844345 11844569 -191240963 + MIR SINE MIR 37 259 -3 300 303 97 0 chr5 11847258 11847403 -191238129 - MIR SINE MIR -6 256 98 249 221 0 0 chr5 11848366 11848434 -191237098 + (TCCA)n Simple_repeat Simple_repeat 1 68 0 331 273 16 50 chr5 11848682 11848803 -191236729 - L2 LINE L2 -238 3034 2918 28 29 0 0 chr5 11849485 11849520 -191236012 + AT_rich Low_complexity Low_complexity 1 35 0 388 216 41 10 chr5 11850376 11850473 -191235059 - L2 LINE L2 0 3313 3214 361 301 103 10 chr5 11850525 11850728 -191234804 + LTR50 LTR ERVL 19 240 -555 694 231 231 0 chr5 11851111 11851375 -191234157 + LTR50 LTR ERVL 471 795 0 450 227 82 0 chr5 11851887 11851997 -191233535 + LTR50 LTR ERVL 9 127 -668 292 304 40 40 chr5 11852047 11852172 -191233360 + MIR3 SINE MIR 30 154 -54 193 0 0 0 chr5 11853756 11853780 -191231752 + MIR SINE MIR 129 152 -110 2152 313 23 37 chr5 11853837 11854674 -191230858 + L1M4b LINE L1 11 835 -6024 1845 186 65 35 chr5 11854675 11855012 -191230520 + L1MA9 LINE L1 5833 6158 -154 483 18 0 0 chr5 11855012 11855068 -191230464 + (CA)n Simple_repeat Simple_repeat 1 56 0 1845 186 65 35 chr5 11855068 11855123 -191230409 + L1MA9 LINE L1 6158 6210 -102 222 37 0 0 chr5 11855123 11855150 -191230382 + (TG)n Simple_repeat Simple_repeat 2 28 0 1845 186 65 35 chr5 11855150 11855185 -191230347 + L1MA9 LINE L1 6210 6274 -38 744 226 111 9 chr5 11855196 11855209 -191230323 + L1M4b LINE L1 1546 1556 -5299 2027 135 0 10 chr5 11855209 11855546 -191229986 + AluSg SINE Alu 1 310 0 744 226 111 9 chr5 11855546 11855819 -191229713 + L1M4b LINE L1 1556 1855 -5000 416 185 6 92 chr5 11855860 11855970 -191229562 + L1M4b LINE L1 2087 2205 -4753 2144 169 45 85 chr5 11855970 11856462 -191229070 + MER70A LTR ERVL 1 472 0 416 185 6 92 chr5 11856462 11856486 -191229046 + L1M4b LINE L1 2205 2609 -4349 * 3053 177 80 49 chr5 11856481 11857222 -191228310 + L1MB7 LINE L1 5421 6184 0 1302 245 40 0 chr5 11861187 11861514 -191224018 + MER63B DNA MER1_type 1 340 -96 315 260 173 36 chr5 11862057 11862334 -191223198 + L1ME LINE L1 5522 5836 -285 7409 59 10 0 chr5 11862611 11863661 -191221871 - L1PA7 LINE L1 -3 6151 5096 2205 114 3 18 chr5 11863663 11863995 -191221537 - L1PA7 LINE L1 -1127 5019 4693 324 307 203 63 chr5 11866113 11866478 -191219054 - L1M2 LINE L1 -5908 941 526 323 298 13 25 chr5 11866479 11866637 -191218895 + G-rich Low_complexity Low_complexity 2 157 0 3946 149 99 45 chr5 11867422 11867780 -191217752 - pTR5 LTR ERV1 0 2606 2269 2909 0 0 0 chr5 11867780 11868087 -191217445 + AluYa5 SINE Alu 1 307 -4 3946 149 99 45 chr5 11868087 11869145 -191216387 - pTR5 LTR ERV1 -337 2269 1524 281 276 69 41 chr5 11870216 11870381 -191215151 - Charlie8 DNA MER1_type -2153 264 104 839 198 135 21 chr5 11870551 11870743 -191214789 + MER58A DNA MER1_type 4 217 -7 183 100 0 0 chr5 11870843 11870873 -191214659 + (TAAAAA)n Simple_repeat Simple_repeat 5 34 0 34 72 0 0 chr5 11872144 11872213 -191213319 + AT_rich Low_complexity Low_complexity 1 69 0 991 286 95 24 chr5 11872422 11872929 -191212603 - MLT1H LTR MaLR 0 549 7 512 209 0 0 chr5 11873306 11873411 -191212121 + MLT1B LTR MaLR 31 135 -255 269 292 49 49 chr5 11873930 11874074 -191211458 - MER5B DNA MER1_type -18 160 17 831 158 8 0 chr5 11874934 11875054 -191210478 - FLAM_C SINE Alu -21 122 2 2215 89 4 0 chr5 11875949 11876259 -191209273 + AluSp SINE Alu 1 311 0 622 232 33 7 chr5 11876374 11876525 -191209007 - MER69A DNA AcHobo -1 176 22 252 0 0 0 chr5 11876525 11876553 -191208979 + (TG)n Simple_repeat Simple_repeat 1 28 0 2228 134 132 5 chr5 11877541 11877921 -191207611 - MSTA LTR MaLR 0 428 1 376 285 72 80 chr5 11878214 11878640 -191206892 - L1 LINE L1 -1359 4787 4357 601 221 58 96 chr5 11878690 11878898 -191206634 + MIR SINE MIR 21 220 -42 24 0 0 0 chr5 11878960 11878984 -191206548 + AT_rich Low_complexity Low_complexity 1 24 0 356 326 86 29 chr5 11879068 11879381 -191206151 - L1 LINE L1 -1908 4238 3908 21 36 0 0 chr5 11879657 11879685 -191205847 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr5 11879731 11879759 -191205773 + AT_rich Low_complexity Low_complexity 1 28 0 1755 190 54 2 chr5 11879805 11880229 -191205303 + LTR53 LTR ERVL 1 519 0 810 143 45 184 chr5 11880477 11880700 -191204832 - 7SK RNA RNA -1 192 1 25 31 0 0 chr5 11881008 11881040 -191204492 + AT_rich Low_complexity Low_complexity 1 32 0 1590 210 7 3 chr5 11881145 11881445 -191204087 - AluJo SINE Alu -11 301 1 354 351 71 37 chr5 11882192 11882514 -191203018 - HAL1b LINE L1 -784 564 232 29 0 5 0 chr5 11883126 11883183 -191202349 + AT_rich Low_complexity Low_complexity 1 29 0 461 240 16 32 chr5 11883247 11883372 -191202160 + MIR SINE MIR 118 240 -22 35 63 0 0 chr5 11883391 11883454 -191202078 + AT_rich Low_complexity Low_complexity 1 63 0 253 301 24 0 chr5 11884751 11884834 -191200698 + L2 LINE L2 3227 3311 -2 261 0 0 0 chr5 11885219 11885248 -191200284 + (TTTA)n Simple_repeat Simple_repeat 4 32 0 565 330 48 21 chr5 11885757 11886090 -191199442 + L1M2 LINE L1 11 352 -6497 11108 238 20 34 chr5 11886848 11889476 -191196056 + L1PA12 LINE L1 2231 4960 -2624 1988 134 108 15 chr5 11889476 11889819 -191195713 + THE1C LTR MaLR 1 375 0 11108 238 20 34 chr5 11889819 11890921 -191194611 + L1PA12 LINE L1 4960 6076 -1508 13000 150 18 25 chr5 11890929 11893170 -191192362 + L1P LINE L1 11 2237 -3909 6058 166 4 10 chr5 11893170 11894366 -191191166 + L1MA4 LINE L1 5105 6294 -6 2370 205 8 149 chr5 11895441 11895523 -191190009 - MLT2B3 LTR ERVL 0 515 423 677 86 0 17 chr5 11895523 11895639 -191189893 + (TAGA)n Simple_repeat Simple_repeat 1 114 0 2370 205 8 149 chr5 11895639 11896141 -191189391 - MLT2B3 LTR ERVL -92 423 13 279 203 0 0 chr5 11896668 11896727 -191188805 + (CA)n Simple_repeat Simple_repeat 1 59 0 22 103 0 0 chr5 11897577 11897655 -191187877 + AT_rich Low_complexity Low_complexity 1 78 0 320 308 65 54 chr5 11897744 11898098 -191187434 + L1MEd LINE L1 846 1203 -4916 748 202 75 144 chr5 11898124 11898715 -191186817 - LTR34 LTR ERV1 -4 695 135 464 160 57 19 chr5 11898788 11898894 -191186638 - MER4C LTR ERV1 -353 112 3 1413 192 63 63 chr5 11898952 11899332 -191186200 - MSTD LTR MaLR -2 394 15 218 189 0 0 chr5 11901202 11901239 -191184293 + CT-rich Low_complexity Low_complexity 2 38 0 201 273 105 70 chr5 11901296 11901468 -191184064 + MIR SINE MIR 30 207 -55 2553 222 21 9 chr5 11901876 11902408 -191183124 - MER74A LTR ERVL -18 540 3 384 304 71 30 chr5 11904387 11904555 -191180977 + MIR SINE MIR 68 242 -20 279 79 0 0 chr5 11904568 11904606 -191180926 + (TTTTA)n Simple_repeat Simple_repeat 3 40 0 631 218 15 0 chr5 11905783 11905916 -191179616 + L1MA10 LINE L1 4685 4819 -1327 * 3488 204 7 59 chr5 11905912 11906779 -191178753 + L1MA10 LINE L1 5512 6333 -1 1655 187 126 6 chr5 11907796 11908122 -191177410 + MLT1A1 LTR MaLR 1 365 0 259 160 32 96 chr5 11908654 11908748 -191176784 - Looper DNA T2_type -97 1461 1374 644 175 10 0 chr5 11908796 11908893 -191176639 + MER2 DNA MER2_type 1 98 -247 1011 251 105 19 chr5 11908893 11909208 -191176324 - MER2 DNA MER2_type 0 345 4 652 235 39 59 chr5 11909209 11909328 -191176204 + MER2 DNA MER2_type 95 215 -130 2168 124 0 0 chr5 11909328 11909627 -191175905 - AluSx SINE Alu -13 299 1 652 235 39 59 chr5 11909627 11909762 -191175770 + MER2 DNA MER2_type 215 344 -1 203 315 41 0 chr5 11910013 11910086 -191175446 - MER91 DNA MER1_type 0 140 65 319 246 37 59 chr5 11910191 11910378 -191175154 - L1MEd LINE L1 -4891 1228 1046 1164 205 43 26 chr5 11910597 11910899 -191174633 - L1MC3 LINE L1 0 7785 7479 2271 114 0 0 chr5 11911154 11911452 -191174080 - AluSx SINE Alu -14 298 1 21 0 0 0 chr5 11911461 11911482 -191174050 + AT_rich Low_complexity Low_complexity 1 21 0 1870 125 39 11 chr5 11911501 11911782 -191173750 - AluSx SINE Alu -13 299 11 2031 157 80 27 chr5 11911932 11912308 -191173224 + MSTD LTR MaLR 1 396 0 22 35 0 0 chr5 11912457 11912486 -191173046 + AT_rich Low_complexity Low_complexity 1 29 0 715 285 191 19 chr5 11912648 11913066 -191172466 + LTR16C LTR ERVL 2 491 0 262 305 69 30 chr5 11913157 11913288 -191172244 - MIR3 SINE MIR -66 142 7 6920 82 6 6 chr5 11914919 11915818 -191169714 + HERVL-A2 LTR ERVL 4756 5654 0 2209 160 36 31 chr5 11915818 11916366 -191169166 + MLT2A2 LTR ERVL 1 554 0 217 191 0 43 chr5 11917021 11917068 -191168464 + GA-rich Low_complexity Low_complexity 4 48 0 225 0 0 0 chr5 11917332 11917357 -191168175 + (TG)n Simple_repeat Simple_repeat 2 26 0 2001 230 91 48 chr5 11917357 11917965 -191167567 - MER21B LTR ERV1 -86 777 144 355 279 23 0 chr5 11918080 11918166 -191167366 - MER21B LTR ERV1 -764 99 12 208 211 58 19 chr5 11918572 11918624 -191166908 + MIR SINE MIR 99 153 -55 1977 181 68 32 chr5 11918654 11919097 -191166435 - LTR2B LTR ERV1 0 490 32 1251 244 54 21 chr5 11919616 11919948 -191165584 - LTR48B LTR ERV1 -4 640 298 4203 169 80 38 chr5 11919949 11920923 -191164609 - LTR48B-int LTR ERV1 -508 5823 4809 375 152 0 15 chr5 11920921 11920987 -191164545 - LTR48B-int LTR ERV1 -4475 1856 1792 * 258 159 23 0 chr5 11921076 11921120 -191164412 - LTR48B-int LTR ERV1 -4699 1632 1588 299 247 11 22 chr5 11921673 11921762 -191163770 - LTR48B-int LTR ERV1 -4954 1377 1290 4766 195 53 86 chr5 11921813 11923145 -191162387 - LTR48B-int LTR ERV1 -5042 1289 1 2668 171 79 53 chr5 11923147 11923236 -191162296 - LTR48B LTR ERV1 0 644 559 2949 84 19 11 chr5 11923236 11923607 -191161925 - THE1C LTR MaLR 0 375 2 2668 171 79 53 chr5 11923607 11923916 -191161616 - LTR48B LTR ERV1 -85 559 222 2433 83 0 3 chr5 11923916 11924228 -191161304 + AluY SINE Alu 1 311 0 2668 171 79 53 chr5 11924228 11924435 -191161097 - LTR48B LTR ERV1 -422 222 22 704 270 89 31 chr5 11924601 11924860 -191160672 + MLT1J LTR MaLR 39 312 -199 201 133 0 0 chr5 11926037 11926067 -191159465 + (GA)n Simple_repeat Simple_repeat 1 30 0 1366 131 66 0 chr5 11926099 11926297 -191159235 - AluJb SINE Alu -16 296 86 26 0 0 0 chr5 11926301 11926327 -191159205 + AT_rich Low_complexity Low_complexity 1 26 0 388 231 92 75 chr5 11926872 11926916 -191158616 - MIR SINE MIR -64 198 156 3342 159 35 0 chr5 11926916 11927451 -191158081 + MER41C LTR ERV1 1 554 0 388 231 92 75 chr5 11927451 11927579 -191157953 - MIR SINE MIR -106 156 23 5367 139 33 20 chr5 11928788 11929670 -191155862 + MER4D LTR ERV1 3 895 -8 660 111 0 0 chr5 11929965 11930064 -191155468 + (TA)n Simple_repeat Simple_repeat 1 99 0 2929 81 103 5 chr5 11930065 11930473 -191155059 + LTR7 LTR ERV1 1 448 -2 208 256 0 0 chr5 11930474 11930517 -191155015 + (CATATA)n Simple_repeat Simple_repeat 4 46 0 329 161 11 75 chr5 11930674 11930767 -191154765 + L1MB4 LINE L1 6093 6179 -1 1040 153 38 169 chr5 11930948 11931220 -191154312 + L1MD3 LINE L1 7547 7759 -236 2236 75 0 0 chr5 11931220 11931498 -191154034 + AluY SINE Alu 26 303 -8 1040 153 38 169 chr5 11931498 11931597 -191153935 + L1MD3 LINE L1 7759 7869 -126 913 223 98 53 chr5 11931616 11932183 -191153349 - LTR48 LTR ERV1 -4 783 1 575 224 2 3 chr5 11932183 11932306 -191153226 + L1MD3 LINE L1 6240 6359 0 250 265 34 6 chr5 11932469 11932556 -191152976 + MIR SINE MIR 58 146 -62 1376 214 28 64 chr5 11932556 11932817 -191152715 - MLT1A2 LTR MaLR 0 374 130 1912 120 223 11 chr5 11932817 11933167 -191152365 - MSTA LTR MaLR -4 424 1 1376 214 28 64 chr5 11933167 11933293 -191152239 - MLT1A2 LTR MaLR -244 130 1 2261 164 46 21 chr5 11934229 11934746 -191150786 + MLT2A2 LTR ERVL 1 554 0 180 125 0 0 chr5 11937782 11937814 -191147718 + (TG)n Simple_repeat Simple_repeat 1 32 0 664 223 13 25 chr5 11937841 11937998 -191147534 - Tigger2 DNA MER2_type -16 2702 2548 * 866 173 46 20 chr5 11937974 11938171 -191147361 - Tigger2 DNA MER2_type -2509 209 8 885 150 44 12 chr5 11938441 11938601 -191146931 - L1MC2 LINE L1 -13 6331 6167 23 0 0 0 chr5 11939900 11939923 -191145609 + AT_rich Low_complexity Low_complexity 1 23 0 384 262 10 0 chr5 11939945 11940048 -191145484 + MER5B DNA MER1_type 1 104 -74 205 79 53 79 chr5 11940138 11940176 -191145356 - MER5A DNA MER1_type -152 37 1 602 195 109 35 chr5 11940197 11940371 -191145161 + MER5A DNA MER1_type 1 187 -2 2099 134 3 0 chr5 11941548 11941855 -191143677 - AluSx SINE Alu -4 308 1 305 196 0 0 chr5 11943379 11943435 -191142097 + L1MC4 LINE L1 6648 6703 -1339 22 0 0 0 chr5 11943874 11943896 -191141636 + AT_rich Low_complexity Low_complexity 1 22 0 1687 41 0 0 chr5 11945177 11945371 -191140161 + L1PA5 LINE L1 5957 6150 -4 24 32 0 0 chr5 11945417 11945448 -191140084 + AT_rich Low_complexity Low_complexity 1 31 0 358 235 99 0 chr5 11945688 11945769 -191139763 - MER117 DNA MER1_type -107 90 2 925 181 0 6 chr5 11945991 11946151 -191139381 - AluSg/x SINE Alu -38 272 114 636 174 36 36 chr5 11946262 11946400 -191139132 - AluSg/x SINE Alu -81 229 92 1695 244 17 3 chr5 11948365 11948725 -191136807 - MLT1A1 LTR MaLR 0 365 1 284 179 30 0 chr5 11949193 11949260 -191136272 + CT-rich Low_complexity Low_complexity 3 71 0 203 346 31 43 chr5 11949643 11949805 -191135727 - L2 LINE L2 -466 2848 2689 407 306 40 30 chr5 11949841 11950040 -191135492 - L1M4 LINE L1 -1104 5042 4842 292 166 5 242 chr5 11950275 11950486 -191135046 + MLT1H LTR MaLR 279 439 -110 1836 237 60 38 chr5 11951111 11951714 -191133818 - L1MC4 LINE L1 -248 7794 7179 589 304 116 42 chr5 11951745 11952203 -191133329 - LTR67 LTR ERVL -5 552 61 197 200 36 0 chr5 11952263 11952318 -191133214 + T-rich Low_complexity Low_complexity 5 61 0 262 291 0 38 chr5 11953795 11953874 -191131658 + CT-rich Low_complexity Low_complexity 2 77 0 440 346 33 22 chr5 11954134 11954351 -191131181 + MIR SINE MIR 3 226 -36 25 51 0 0 chr5 11955671 11955710 -191129822 + AT_rich Low_complexity Low_complexity 1 39 0 2184 108 0 3 chr5 11957132 11957427 -191128105 + AluSx SINE Alu 1 294 -18 1137 210 30 63 chr5 11957520 11957795 -191127737 + MER33 DNA MER1_type 3 267 -2318 2226 80 3 13 chr5 11957795 11958095 -191127437 - AluSp SINE Alu -16 297 1 1137 210 30 63 chr5 11958095 11958152 -191127380 + MER33 DNA MER1_type 267 324 0 186 226 83 60 chr5 11958356 11958440 -191127092 - MIR SINE MIR -140 122 37 194 279 0 0 chr5 11961491 11961534 -191123998 - MIR SINE MIR -109 153 111 189 74 0 0 chr5 11961590 11961617 -191123915 + (AAATG)n Simple_repeat Simple_repeat 4 30 0 201 196 0 0 chr5 11961933 11961979 -191123553 + (TA)n Simple_repeat Simple_repeat 2 47 0 5406 110 16 21 chr5 11962454 11963282 -191122250 + L1PA13 LINE L1 5333 6162 -1 263 136 0 0 chr5 11963323 11963367 -191122165 - L1MA9 LINE L1 -35 6277 6234 445 152 15 38 chr5 11963438 11963570 -191121962 + CT-rich Low_complexity Low_complexity 2 130 0 401 206 10 0 chr5 11963673 11963770 -191121762 + CT-rich Low_complexity Low_complexity 3 100 0 358 197 0 0 chr5 11963770 11963836 -191121696 - L1MA8 LINE L1 -130 6161 6096 2211 304 140 22 chr5 11965452 11966949 -191118583 + L2 LINE L2 1382 3107 -206 2656 111 3 11 chr5 11966949 11967327 -191118205 + THE1C LTR MaLR 1 375 0 2211 304 140 22 chr5 11967327 11967552 -191117980 + L2 LINE L2 3107 3304 -9 351 200 16 96 chr5 11967613 11967738 -191117794 - MIR SINE MIR -138 124 10 192 314 35 47 chr5 11967757 11967778 -191117754 - L2 LINE L2 -54 3218 3198 1925 193 85 9 chr5 11967778 11968203 -191117329 - MSTB2 LTR MaLR 0 457 1 192 314 35 47 chr5 11968203 11968267 -191117265 - L2 LINE L2 -74 3198 3134 1592 243 49 27 chr5 11968502 11968991 -191116541 - MLT1D LTR MaLR 0 505 6 208 174 0 22 chr5 11969302 11969348 -191116184 + T-rich Low_complexity Low_complexity 3 47 0 2319 57 0 0 chr5 11970068 11970401 -191115131 - AluY SINE Alu 0 333 1 2290 107 0 0 chr5 11970471 11970771 -191114761 - AluY SINE Alu -11 300 1 215 284 210 33 chr5 11970794 11971037 -191114495 - L2 LINE L2 -527 2787 2502 26 93 0 0 chr5 11971706 11971781 -191113751 + AT_rich Low_complexity Low_complexity 1 75 0 1616 179 14 0 chr5 11972212 11972526 -191113006 - AluJb SINE Alu 0 318 1 1108 278 65 15 chr5 11973839 11974242 -191111290 + LTR16A LTR ERVL 25 447 -3 1832 132 30 40 chr5 11974984 11975356 -191110176 - THE1C LTR MaLR 0 375 8 5712 198 14 50 chr5 11975888 11975905 -191109627 - L1P3 LINE L1 -4290 2171 2155 14056 128 7 6 chr5 11975905 11979000 -191106532 - L1PA8A LINE L1 -6 6125 3030 5712 198 14 50 chr5 11979000 11980878 -191104654 - L1P3 LINE L1 -4306 2155 259 685 198 16 101 chr5 11981112 11981360 -191104172 + LTR12 LTR ERV1 238 464 -250 1517 104 3 97 chr5 11981389 11981677 -191103855 - L1P3 LINE L1 -5613 262 2 189 215 62 62 chr5 11982434 11982499 -191103033 - MIR SINE MIR -88 174 110 715 215 34 10 chr5 11982825 11983030 -191102502 - MLT1C LTR MaLR -251 216 7 22 35 0 0 chr5 11983945 11983974 -191101558 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr5 11984424 11984445 -191101087 + AT_rich Low_complexity Low_complexity 1 21 0 2052 147 3 3 chr5 11985611 11985911 -191099621 + AluJb SINE Alu 4 303 -9 13156 128 8 3 chr5 11986103 11988996 -191096536 + L1PA8A LINE L1 3229 6125 -6 1885 131 24 40 chr5 11989611 11989985 -191095547 + THE1C LTR MaLR 8 375 0 1108 278 65 15 chr5 11990727 11991130 -191094402 - LTR16A LTR ERVL -3 447 25 1603 179 14 0 chr5 11992443 11992769 -191092763 + AluJb SINE Alu 1 330 0 26 93 0 0 chr5 11993200 11993275 -191092257 + AT_rich Low_complexity Low_complexity 1 75 0 212 282 212 33 chr5 11993945 11994186 -191091346 + L2 LINE L2 2502 2785 -529 2281 107 0 0 chr5 11994211 11994510 -191091022 + AluY SINE Alu 1 299 -12 2320 57 0 0 chr5 11994580 11994933 -191090599 + AluY SINE Alu 1 353 0 208 174 0 22 chr5 11995653 11995699 -191089833 + A-rich Low_complexity Low_complexity 3 47 0 1631 226 26 94 chr5 11996034 11996497 -191089035 - L1M4 LINE L1 -934 5448 5050 306 87 0 0 chr5 11996497 11996543 -191088989 + (TA)n Simple_repeat Simple_repeat 2 47 0 1631 226 26 94 chr5 11996543 11996801 -191088731 - L1M4 LINE L1 -1332 5050 4776 4790 161 48 25 chr5 11996810 11997920 -191087612 - L1MA7 LINE L1 0 6291 5158 229 218 0 0 chr5 11997980 11998035 -191087497 - L1M4 LINE L1 -3921 2463 2409 417 272 159 46 chr5 11998037 11998320 -191087212 - L1M4 LINE L1 -786 5360 5046 1915 144 57 28 chr5 11998326 11998680 -191086852 - THE1B LTR MaLR 0 364 1 10030 106 24 35 chr5 11998680 11999776 -191085756 - THE1B-int LTR MaLR 0 1580 505 2555 82 14 6 chr5 11999776 12000129 -191085403 - L1PA8A LINE L1 0 6131 5776 10030 106 24 35 chr5 12000129 12000628 -191084904 - THE1B-int LTR MaLR -1075 505 2 1747 171 39 15 chr5 12000629 12000963 -191084569 - THE1B LTR MaLR 0 364 23 5672 61 16 0 chr5 12000966 12001899 -191083633 - L1PA7 LINE L1 -115 6039 5092 2111 192 17 28 chr5 12001897 12002821 -191082711 + L1PA7 LINE L1 3757 5115 -1031 * 1026 243 117 23 chr5 12002828 12003196 -191082336 - MSTD LTR MaLR 0 396 1 4192 208 32 23 chr5 12003199 12004649 -191080883 + L1MA10 LINE L1 4438 5874 -460 2026 174 13 16 chr5 12004649 12005023 -191080509 + THE1C LTR MaLR 3 375 0 9436 125 12 73 chr5 12005028 12006709 -191078823 + THE1C-int LTR MaLR 1 1580 0 2270 140 11 21 chr5 12006709 12007088 -191078444 + THE1C LTR MaLR 1 375 0 4192 208 32 23 chr5 12007088 12007501 -191078031 + L1MA10 LINE L1 5876 6332 -2 315 223 19 19 chr5 12007494 12007597 -191077935 - L1M4 LINE L1 -1239 4907 4805 * 323 109 0 0 chr5 12007762 12007817 -191077715 - L1MA3 LINE L1 -1 6304 6250 617 269 90 54 chr5 12007834 12008448 -191077084 - L1MEc LINE L1 -4934 1462 827 2171 149 68 13 chr5 12008470 12008866 -191076666 + MSTB LTR MaLR 9 426 0 565 310 125 48 chr5 12009591 12010261 -191075271 + L2 LINE L2 2567 3283 -30 229 203 29 14 chr5 12011257 12011326 -191074206 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 1451 140 0 0 chr5 12012151 12012365 -191073167 - AluSg/x SINE Alu -15 297 84 1360 110 24 89 chr5 12012994 12013240 -191072292 + MER30 DNA MER1_type 1 230 0 744 226 92 36 chr5 12013537 12013958 -191071574 + MLT1D LTR MaLR 21 501 -4 327 203 0 0 chr5 12014287 12014356 -191071176 + (CATATA)n Simple_repeat Simple_repeat 3 71 0 22 0 0 0 chr5 12015932 12015954 -191069578 + AT_rich Low_complexity Low_complexity 1 22 0 2247 105 0 25 chr5 12016435 12016749 -191068783 + AluSg SINE Alu 1 306 -4 324 294 81 48 chr5 12017251 12017647 -191067885 - L2 LINE L2 -174 3139 2734 307 319 93 30 chr5 12018354 12018624 -191066908 - L3 LINE CR1 -428 1149 863 2283 95 10 0 chr5 12019303 12019607 -191065925 - AluSp SINE Alu -6 307 1 3232 233 41 10 chr5 12021423 12022222 -191063310 + L1MB7 LINE L1 5352 6175 -9 428 0 19 0 chr5 12023029 12023081 -191062451 + (TG)n Simple_repeat Simple_repeat 2 54 0 221 309 37 0 chr5 12023787 12023868 -191061664 + L3 LINE CR1 1492 1575 -2 1416 230 69 34 chr5 12023942 12024384 -191061148 + MER31B LTR ERV1 3 657 -4 1047 213 58 5 chr5 12024384 12024537 -191060995 + MER20 DNA MER1_type 2 170 -49 234 62 0 0 chr5 12024537 12024569 -191060963 + (CA)n Simple_repeat Simple_repeat 1 32 0 1047 213 58 5 chr5 12024569 12024622 -191060910 + MER20 DNA MER1_type 170 219 0 358 252 106 31 chr5 12024798 12025059 -191060473 - MLT1J2 LTR MaLR -10 436 152 310 271 115 78 chr5 12026063 12026332 -191059200 - MLT1J2 LTR MaLR -65 385 107 1634 149 112 6 chr5 12026367 12026689 -191058843 - LTR18B LTR ERVL 0 614 259 1381 101 11 0 chr5 12026909 12027098 -191058434 - LTR18B LTR ERVL -423 191 1 270 292 42 0 chr5 12027098 12027189 -191058343 - MLT1J1 LTR MaLR -343 103 9 989 257 159 0 chr5 12029008 12029265 -191056267 - MER77 LTR ERV1 0 605 308 1064 232 62 77 chr5 12029383 12029719 -191055813 - MER77 LTR ERV1 -253 352 22 207 0 0 0 chr5 12030277 12030300 -191055232 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1762 158 36 4 chr5 12030572 12030851 -191054681 + AluJo SINE Alu 6 293 -19 1091 213 126 60 chr5 12031734 12031773 -191053759 - MLT2B1 LTR ERVL -1 413 378 255 61 0 0 chr5 12031773 12031806 -191053726 + (TG)n Simple_repeat Simple_repeat 1 33 0 1091 213 126 60 chr5 12031806 12032195 -191053337 - MLT2B1 LTR ERVL -36 378 1 264 312 8 48 chr5 12032977 12033102 -191052430 - L2 LINE L2 -13 3300 3181 528 265 139 0 chr5 12034677 12034843 -191050689 - MER5A DNA MER1_type 0 189 1 21 36 0 0 chr5 12035068 12035096 -191050436 + AT_rich Low_complexity Low_complexity 1 28 0 765 300 76 103 chr5 12036318 12036990 -191048542 + L3 LINE CR1 36 684 -893 5617 147 14 3 chr5 12036990 12038211 -191047321 + L1PA15 LINE L1 4933 6161 -4 765 300 76 103 chr5 12038211 12038351 -191047181 + L3 LINE CR1 684 826 -751 2408 161 48 22 chr5 12038414 12038831 -191046701 - MSTA LTR MaLR 0 428 1 332 285 46 39 chr5 12039166 12039296 -191046236 + L3 LINE CR1 1426 1556 -21 282 29 0 0 chr5 12039352 12039387 -191046145 + (CA)n Simple_repeat Simple_repeat 1 35 0 2273 101 0 3 chr5 12041390 12041688 -191043844 - AluSq SINE Alu -16 297 1 409 283 6 17 chr5 12042967 12043147 -191042385 + (TATATG)n Simple_repeat Simple_repeat 3 180 0 205 309 14 7 chr5 12043166 12043305 -191042227 + (TATATG)n Simple_repeat Simple_repeat 3 142 0 414 293 17 0 chr5 12043395 12043569 -191041963 + (TATATG)n Simple_repeat Simple_repeat 3 179 0 200 213 0 0 chr5 12043635 12043682 -191041850 + (TATATG)n Simple_repeat Simple_repeat 3 49 0 210 333 7 20 chr5 12043756 12043906 -191041626 + (CATATA)n Simple_repeat Simple_repeat 3 150 0 275 29 0 0 chr5 12045071 12045106 -191040426 + L1PA6 LINE L1 6111 6145 -9 1983 145 0 23 chr5 12045138 12045442 -191040090 - AluSx SINE Alu -15 297 1 191 310 17 0 chr5 12045681 12045739 -191039793 + L2 LINE L2 3214 3272 0 1491 139 31 5 chr5 12046453 12046676 -191038856 + MER30 DNA MER1_type 2 230 0 180 273 0 0 chr5 12047431 12047497 -191038035 + CT-rich Low_complexity Low_complexity 4 69 0 199 361 48 30 chr5 12047825 12047991 -191037541 - L2 LINE L2 -428 2886 2718 246 326 181 7 chr5 12047993 12048131 -191037401 + L2 LINE L2 3152 3313 0 332 351 89 0 chr5 12048857 12049025 -191036507 + MIR SINE MIR 8 190 -72 208 315 126 16 chr5 12049510 12049637 -191035895 - MIR SINE MIR -59 203 63 339 285 164 15 chr5 12050570 12050744 -191034788 + MIR SINE MIR 45 241 -21 2117 104 0 44 chr5 12050899 12051217 -191034315 - AluSx SINE Alu -8 304 1 9362 238 84 22 chr5 12051336 12056141 -191029391 - L1MC3 LINE L1 -14 7771 2638 2144 139 7 3 chr5 12056141 12056451 -191029081 + AluSx SINE Alu 1 311 -1 9362 238 84 22 chr5 12056451 12056672 -191028860 - L1MC3 LINE L1 -5147 2638 2432 1282 260 100 91 chr5 12056705 12057085 -191028447 + MLT1E2 LTR MaLR 1 392 -234 1009 203 124 95 chr5 12057085 12057538 -191027994 + MER31B LTR ERV1 1 466 0 1282 260 100 91 chr5 12057538 12057665 -191027867 + MLT1E2 LTR MaLR 392 516 -110 213 39 0 0 chr5 12059952 12059978 -191025554 + (TG)n Simple_repeat Simple_repeat 2 27 0 507 173 9 27 chr5 12060956 12061066 -191024466 + MER67D LTR ERV1 1 108 -406 344 188 25 12 chr5 12061101 12061181 -191024351 + MER67D LTR ERV1 430 510 -4 2299 154 35 31 chr5 12061609 12062158 -191023374 + MLT2A2 LTR ERVL 1 554 0 225 0 0 0 chr5 12063058 12063083 -191022449 + (TC)n Simple_repeat Simple_repeat 2 26 0 1793 147 6 35 chr5 12063838 12064150 -191021382 + AluJb SINE Alu 1 303 -9 26 30 0 0 chr5 12064215 12064248 -191021284 + AT_rich Low_complexity Low_complexity 1 33 0 2198 110 0 26 chr5 12064540 12064849 -191020683 - AluSq SINE Alu -12 301 1 445 228 33 0 chr5 12066136 12066228 -191019304 - MLT1B LTR MaLR -32 358 264 1246 208 82 38 chr5 12066232 12066598 -191018934 + MLT1B LTR MaLR 6 387 -3 2492 67 0 3 chr5 12067386 12067686 -191017846 + AluY SINE Alu 1 299 -12 183 80 0 0 chr5 12070755 12070780 -191014752 + (A)n Simple_repeat Simple_repeat 1 25 0 240 227 18 118 chr5 12071119 12071229 -191014303 - MIR SINE MIR -7 255 157 800 114 0 64 chr5 12071231 12071371 -191014161 - AluSg/x SINE Alu -1 309 179 180 0 0 0 chr5 12071371 12071391 -191014141 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 227 323 43 0 chr5 12071399 12071492 -191014040 - MIR SINE MIR -110 152 56 297 287 33 47 chr5 12071761 12071911 -191013621 + MIR SINE MIR 91 238 -24 1217 241 177 9 chr5 12073458 12073922 -191011610 + MER74A LTR ERVL 1 542 -16 1519 126 13 4 chr5 12074406 12074644 -191010888 + L1MA2 LINE L1 6065 6304 0 201 39 0 0 chr5 12075598 12075624 -191009908 + (TTA)n Simple_repeat Simple_repeat 2 27 0 2502 76 0 0 chr5 12076502 12076803 -191008729 + AluSc SINE Alu 1 301 -8 2145 126 0 3 chr5 12077123 12077424 -191008108 + AluSx SINE Alu 1 300 -12 744 273 10 10 chr5 12077521 12077730 -191007802 - LTR40a LTR ERVL -303 216 8 1475 178 7 40 chr5 12081323 12081626 -191003906 - L1MA7 LINE L1 -410 5881 5589 1903 180 35 20 chr5 12081626 12082023 -191003509 + L1MA7 LINE L1 5883 6288 -3 745 145 26 0 chr5 12082044 12082161 -191003371 + FRAM SINE Alu 37 156 -20 3168 198 20 37 chr5 12082810 12083055 -191002477 - L1MA9 LINE L1 -35 6277 6030 2335 99 0 0 chr5 12083055 12083348 -191002184 - AluSg1 SINE Alu -16 293 1 3168 198 20 37 chr5 12083348 12083839 -191001693 - L1MA9 LINE L1 -282 6030 5553 2857 195 90 12 chr5 12083835 12084180 -191001352 + L1M2 LINE L1 4589 4906 -1398 * 189 0 0 0 chr5 12084180 12084201 -191001331 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 2857 195 90 12 chr5 12084201 12084772 -191000760 + L1M2 LINE L1 4906 5561 -743 27 0 0 0 chr5 12084874 12084901 -191000631 + AT_rich Low_complexity Low_complexity 1 27 0 280 301 19 0 chr5 12085039 12085142 -191000390 - L1ME3A LINE L1 -227 5943 5839 240 207 81 23 chr5 12085298 12085385 -191000147 + L1MC4 LINE L1 6612 6703 -1339 238 102 0 41 chr5 12085396 12085445 -191000087 + (TA)n Simple_repeat Simple_repeat 2 48 0 776 230 95 24 chr5 12085602 12085971 -190999561 - L1MC5 LINE L1 -225 7736 7342 245 206 24 40 chr5 12085976 12086017 -190999515 + (CATATA)n Simple_repeat Simple_repeat 6 46 -83 2075 148 52 56 chr5 12086017 12086464 -190999068 + MER65A LTR ERV1 1 445 0 245 206 24 40 chr5 12086464 12086548 -190998984 + (CATATA)n Simple_repeat Simple_repeat 46 129 0 1963 193 32 17 chr5 12086765 12087175 -190998357 + MLT2C2 LTR ERVL 1 416 -48 243 164 0 0 chr5 12087191 12087252 -190998280 + (CA)n Simple_repeat Simple_repeat 2 62 0 195 42 0 0 chr5 12087286 12087310 -190998222 + (TA)n Simple_repeat Simple_repeat 2 25 0 273 208 0 62 chr5 12087327 12087423 -190998109 + L1MC4 LINE L1 6614 6703 -1339 180 0 0 0 chr5 12087427 12087447 -190998085 + (GA)n Simple_repeat Simple_repeat 2 21 0 245 139 93 0 chr5 12087465 12087508 -190998024 + MLT2C2 LTR ERVL 472 518 -2 255 299 17 26 chr5 12088687 12088804 -190996728 + MIR SINE MIR 97 212 -50 1147 207 29 0 chr5 12088886 12089094 -190996438 + MER20 DNA MER1_type 6 219 0 8619 48 0 0 chr5 12091310 12092279 -190993253 - LTR5 LTR ERVK 0 969 1 1702 198 91 82 chr5 12092866 12093381 -190992151 - MLT2B1 LTR ERVL 0 520 1 929 245 54 51 chr5 12093915 12094246 -190991286 - MLT1E LTR MaLR -199 394 63 373 66 33 0 chr5 12094920 12094981 -190990551 + (TG)n Simple_repeat Simple_repeat 2 64 0 1713 226 6 43 chr5 12096387 12096801 -190988731 - L1ME1 LINE L1 -168 6067 5672 2178 82 43 0 chr5 12096801 12097080 -190988452 - AluY SINE Alu -5 306 16 1713 226 6 43 chr5 12097080 12097148 -190988384 - L1ME1 LINE L1 -563 5672 5603 1032 274 84 37 chr5 12097156 12097754 -190987778 - L1ME1 LINE L1 -2054 4161 3536 875 150 4 177 chr5 12098027 12098269 -190987263 + MER51C LTR ERV1 446 640 0 421 287 15 7 chr5 12098272 12098408 -190987124 - L1ME1 LINE L1 -2681 3534 3398 3902 185 62 6 chr5 12098412 12099218 -190986314 - L1MB2 LINE L1 -5 6166 5316 3328 262 56 30 chr5 12099210 12101960 -190983572 - L1ME1 LINE L1 -2797 3418 639 * 458 277 196 5 chr5 12101967 12102151 -190983381 + MER20 DNA MER1_type 1 219 0 1402 297 41 17 chr5 12102154 12102743 -190982789 - L1ME1 LINE L1 -5760 636 34 27 62 0 0 chr5 12103015 12103063 -190982469 + AT_rich Low_complexity Low_complexity 1 48 0 597 140 13 33 chr5 12104363 12104513 -190981019 + CT-rich Low_complexity Low_complexity 2 148 0 22 0 0 0 chr5 12105230 12105252 -190980280 + AT_rich Low_complexity Low_complexity 1 22 0 2290 131 41 16 chr5 12105558 12105924 -190979608 + THE1C LTR MaLR 1 375 0 7963 159 40 33 chr5 12105924 12107494 -190978038 + THE1C-int LTR MaLR 1 1580 0 2214 138 42 8 chr5 12107496 12107857 -190977675 + THE1C LTR MaLR 3 375 0 1131 225 14 0 chr5 12108117 12108339 -190977193 + AluJb SINE Alu 5 229 -83 1110 238 47 0 chr5 12109367 12109644 -190975888 - MER58B DNA MER1_type -6 335 46 395 303 117 7 chr5 12111810 12112091 -190973441 + MLT1J2 LTR MaLR 18 329 -121 277 300 0 0 chr5 12113080 12113160 -190972372 + (TG)n Simple_repeat Simple_repeat 2 81 0 1647 110 44 0 chr5 12114082 12114309 -190971223 - AluSg/x SINE Alu -4 306 70 644 211 172 16 chr5 12115922 12116178 -190969354 - MER69 DNA AcHobo -94 2432 2137 995 271 83 95 chr5 12116248 12116583 -190968949 - MER69B DNA AcHobo -1609 917 580 244 150 0 67 chr5 12116583 12116643 -190968889 + LTR66 LTR ERVL 384 439 -171 333 68 0 0 chr5 12116643 12116687 -190968845 + (TG)n Simple_repeat Simple_repeat 2 45 0 995 271 83 95 chr5 12116687 12116698 -190968834 - MER69B DNA AcHobo -1945 581 571 2242 109 0 10 chr5 12116698 12117001 -190968531 - AluSq SINE Alu -13 300 1 995 271 83 95 chr5 12117001 12117406 -190968126 - MER69B DNA AcHobo -1955 571 72 2479 67 0 7 chr5 12117889 12118189 -190967343 - AluY SINE Alu -13 298 1 2225 121 0 13 chr5 12118196 12118511 -190967021 - AluSq SINE Alu -1 312 2 22 0 0 0 chr5 12118687 12118709 -190966823 + AT_rich Low_complexity Low_complexity 1 22 0 223 249 73 0 chr5 12120044 12120136 -190965396 + MER5A DNA MER1_type 63 152 -26 261 0 0 0 chr5 12120208 12120237 -190965295 + (A)n Simple_repeat Simple_repeat 1 29 0 378 245 23 35 chr5 12121092 12121233 -190964299 + MIR SINE MIR 45 184 -63 2212 167 53 17 chr5 12121294 12121678 -190963854 - MSTA LTR MaLR 0 428 27 2955 63 115 5 chr5 12121678 12122037 -190963495 + MLT2A1 LTR ERVL 2 411 -33 905 90 0 8 chr5 12122037 12122171 -190963361 + (TCTA)n Simple_repeat Simple_repeat 3 135 0 2955 63 115 5 chr5 12122171 12122210 -190963322 + MLT2A1 LTR ERVL 411 444 0 2212 167 53 17 chr5 12122210 12122238 -190963294 - MSTA LTR MaLR -401 27 1 37743 93 13 7 chr5 12123514 12129668 -190955864 + L1PA6 LINE L1 11 6154 0 35 24 0 0 chr5 12129910 12129952 -190955580 + AT_rich Low_complexity Low_complexity 1 42 0 312 27 0 0 chr5 12130247 12130284 -190955248 + (TG)n Simple_repeat Simple_repeat 2 38 0 246 193 0 0 chr5 12130921 12130978 -190954554 + (CA)n Simple_repeat Simple_repeat 2 58 0 1520 257 38 16 chr5 12134676 12135127 -190950405 - LTR53 LTR ERVL -7 512 52 547 270 37 18 chr5 12135667 12135830 -190949702 + MIR SINE MIR 60 225 -37 775 267 115 33 chr5 12135871 12136298 -190949234 + MLT1C LTR MaLR 1 462 -5 191 214 0 71 chr5 12136400 12136456 -190949076 - L2 LINE L2 -5 3267 3216 229 189 0 0 chr5 12137410 12137447 -190948085 + MER81 DNA DNA 1 37 -77 238 301 0 0 chr5 12140384 12140457 -190945075 - MIR SINE MIR -129 133 61 2469 146 34 2 chr5 12141460 12141871 -190943661 + MSTA LTR MaLR 1 424 -4 650 242 159 5 chr5 12142119 12142533 -190942999 + MLT1G1 LTR MaLR 30 541 -49 1386 207 34 14 chr5 12143130 12143425 -190942107 + AluJb SINE Alu 1 301 -1 696 276 148 6 chr5 12145922 12146259 -190939273 - L1MC4 LINE L1 -151 7891 7507 2080 140 21 32 chr5 12146364 12146743 -190938789 - THE1C LTR MaLR 0 375 1 1527 196 145 0 chr5 12148224 12148576 -190936956 - MER57A LTR ERV1 0 403 1 320 44 0 0 chr5 12148614 12148659 -190936873 + AluSp/q SINE Alu 255 299 -4 519 219 0 47 chr5 12150558 12150686 -190934846 + MLT1A1 LTR MaLR 1 122 -243 1234 202 34 15 chr5 12151004 12151266 -190934266 + MLT1A1 LTR MaLR 99 365 0 5405 130 13 7 chr5 12151585 12152563 -190932969 - L1PA14 LINE L1 -66 6095 5112 1801 140 184 11 chr5 12152729 12153094 -190932438 + MSTA LTR MaLR 1 428 0 993 114 0 0 chr5 12153116 12153256 -190932276 + MSTA-int LTR MaLR 59 198 -1382 238 269 0 0 chr5 12153256 12153308 -190932224 + (TG)n Simple_repeat Simple_repeat 2 53 0 2488 159 33 28 chr5 12153608 12154067 -190931465 - MLT1C LTR MaLR -1 466 6 326 89 78 0 chr5 12154189 12154279 -190931253 + (TCTA)n Simple_repeat Simple_repeat 2 98 0 2356 106 0 6 chr5 12155560 12155872 -190929660 - AluSp SINE Alu -2 311 2 249 287 53 0 chr5 12156546 12156640 -190928892 + MIR SINE MIR 132 230 -32 21 95 0 0 chr5 12157359 12157422 -190928110 + AT_rich Low_complexity Low_complexity 1 63 0 240 291 57 70 chr5 12157436 12157543 -190927989 - L1P LINE L1 -2364 3782 3676 288 0 0 0 chr5 12157543 12157575 -190927957 + (TG)n Simple_repeat Simple_repeat 2 33 0 240 291 57 70 chr5 12157575 12157625 -190927907 - L1P LINE L1 -2470 3676 3627 22 0 0 0 chr5 12161132 12161154 -190924378 + AT_rich Low_complexity Low_complexity 1 22 0 874 268 27 27 chr5 12162736 12163035 -190922497 + L1MD2 LINE L1 4398 4696 -1450 * 2760 240 67 62 chr5 12163030 12163972 -190921560 + L1MD2 LINE L1 5056 6042 -317 1806 158 45 24 chr5 12163972 12164302 -190921230 + MER1B DNA MER1_type 1 337 0 2760 240 67 62 chr5 12164302 12164612 -190920920 + L1MD2 LINE L1 6042 6349 -10 392 254 46 23 chr5 12164764 12164894 -190920638 + HAL1b LINE L1 681 813 -535 5020 224 44 12 chr5 12165059 12165995 -190919537 - L1 LINE L1 -951 5195 4290 258 105 0 0 chr5 12165995 12166033 -190919499 + (TG)n Simple_repeat Simple_repeat 1 38 0 5020 224 44 12 chr5 12166033 12166113 -190919419 - L1 LINE L1 -1856 4290 4214 258 32 0 0 chr5 12166113 12166144 -190919388 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 5020 224 44 12 chr5 12166144 12166499 -190919033 - L1 LINE L1 -1932 4214 3779 2365 189 37 18 chr5 12166501 12167120 -190918412 + L1MA9 LINE L1 5207 5840 -472 2049 161 9 0 chr5 12167270 12167618 -190917914 + L1PA16 LINE L1 5811 6161 -5 387 145 0 0 chr5 12167899 12167968 -190917564 + (CAT)n Simple_repeat Simple_repeat 2 70 0 180 286 202 0 chr5 12168485 12168604 -190916928 + L2 LINE L2 3102 3244 -69 2147 116 7 7 chr5 12170316 12170619 -190914913 - AluSx SINE Alu -8 304 2 328 224 152 8 chr5 12170899 12171024 -190914508 + Charlie7 DNA MER1_type 49 191 -2421 508 237 16 37 chr5 12171324 12171514 -190914018 + Charlie7 DNA MER1_type 581 766 -1846 1540 271 73 54 chr5 12172019 12173131 -190912401 + Charlie7 DNA MER1_type 1312 2444 -168 21 0 0 0 chr5 12173426 12173447 -190912085 + AT_rich Low_complexity Low_complexity 1 21 0 221 226 15 73 chr5 12173976 12174113 -190911419 + T-rich Low_complexity Low_complexity 2 130 0 216 0 0 0 chr5 12175161 12175185 -190910347 + (TG)n Simple_repeat Simple_repeat 1 24 0 375 243 43 64 chr5 12175244 12175384 -190910148 - MIR SINE MIR -109 153 17 790 163 7 14 chr5 12176199 12176340 -190909192 - FLAM_A SINE Alu -2 140 1 2010 112 0 0 chr5 12176788 12177074 -190908458 + AluSq SINE Alu 26 311 0 2135 217 84 42 chr5 12177074 12177982 -190907550 - L1MEc LINE L1 -2939 3276 2331 256 274 126 0 chr5 12178008 12178198 -190907334 - L1MEc LINE L1 -4094 2302 2089 1221 112 96 0 chr5 12178962 12179150 -190906382 - LTR12 LTR ERV1 -132 582 377 367 213 11 0 chr5 12179151 12179245 -190906287 - LTR30 LTR ERV1 -80 642 548 6114 96 43 61 chr5 12179245 12180419 -190905113 - pTR5 LTR ERV1 -409 2029 741 609 277 104 38 chr5 12181022 12181581 -190903951 + L1ME LINE L1 4885 5333 -813 340 264 47 0 chr5 12181594 12181700 -190903832 + L1ME LINE L1 5543 5653 -468 593 304 104 36 chr5 12182892 12183363 -190902169 - MLT1K LTR MaLR -6 582 80 24 32 0 0 chr5 12183667 12183698 -190901834 + AT_rich Low_complexity Low_complexity 1 31 0 391 184 10 10 chr5 12185627 12185725 -190899807 + CT-rich Low_complexity Low_complexity 4 101 0 237 266 0 0 chr5 12187087 12187181 -190898351 + (CA)n Simple_repeat Simple_repeat 2 95 0 234 191 0 0 chr5 12187519 12187566 -190897966 + GA-rich Low_complexity Low_complexity 3 49 0 349 324 55 14 chr5 12187578 12187723 -190897809 + MIR SINE MIR 3 153 -109 21 0 0 0 chr5 12190213 12190234 -190895298 + AT_rich Low_complexity Low_complexity 1 21 0 2325 250 42 44 chr5 12191328 12192680 -190892852 + L1MB8 LINE L1 914 2258 -4701 829 259 48 48 chr5 12192718 12193027 -190892505 - MLT1C LTR MaLR -3 464 156 2141 264 75 48 chr5 12193035 12193813 -190891719 + L1MB8 LINE L1 3556 4312 -2645 264 59 0 0 chr5 12193813 12193847 -190891685 + (CA)n Simple_repeat Simple_repeat 1 34 0 576 106 0 141 chr5 12193853 12193995 -190891537 + L1MA8 LINE L1 6169 6290 -1 2141 264 75 48 chr5 12193995 12194502 -190891030 + L1MB8 LINE L1 4316 4883 -2074 4040 212 37 25 chr5 12194526 12196076 -190889456 - L1MB3 LINE L1 -12 6171 4597 1077 264 30 15 chr5 12196080 12196474 -190889058 + L1MB8 LINE L1 4875 5274 -1683 * 2319 223 25 28 chr5 12196469 12196683 -190888849 + L1MB8 LINE L1 5689 5902 -1087 2398 75 0 0 chr5 12196683 12196976 -190888556 + AluY SINE Alu 1 293 -18 2319 223 25 28 chr5 12196976 12197895 -190887637 + L1MB8 LINE L1 5902 6989 0 265 314 88 10 chr5 12199932 12200034 -190885498 + L2 LINE L2 2872 2981 -332 23 0 0 0 chr5 12200406 12200429 -190885103 + AT_rich Low_complexity Low_complexity 1 23 0 247 323 39 23 chr5 12200788 12200918 -190884614 - L2 LINE L2 0 3272 3141 4179 118 53 16 chr5 12202129 12202824 -190882708 + L1PA13 LINE L1 5443 6163 0 1678 189 123 3 chr5 12203195 12203384 -190882148 - MSTA LTR MaLR 0 428 263 309 26 0 0 chr5 12203384 12203422 -190882110 + (GA)n Simple_repeat Simple_repeat 2 39 0 1678 189 123 3 chr5 12203422 12203614 -190881918 - MSTA LTR MaLR -165 263 1 2227 226 107 16 chr5 12203661 12204648 -190880884 + L1MC/D LINE L1 4362 5446 -743 4146 109 10 0 chr5 12204695 12205312 -190880220 - L1P LINE L1 -2329 3817 3195 6566 85 1 3 chr5 12205315 12206294 -190879238 + L1PA8 LINE L1 5179 6155 -17 582 114 0 0 chr5 12206297 12206385 -190879147 + (TA)n Simple_repeat Simple_repeat 1 88 0 32 86 0 0 chr5 12207538 12207619 -190877913 + AT_rich Low_complexity Low_complexity 1 81 0 26 50 0 0 chr5 12207960 12208000 -190877532 + AT_rich Low_complexity Low_complexity 1 40 0 284 367 36 22 chr5 12208231 12208509 -190877023 + L1MEc LINE L1 34 315 -6081 23 33 0 0 chr5 12209145 12209175 -190876357 + AT_rich Low_complexity Low_complexity 1 30 0 532 286 93 35 chr5 12209192 12209786 -190875746 + L1MEc LINE L1 1039 1666 -4730 27 0 0 0 chr5 12210217 12210244 -190875288 + AT_rich Low_complexity Low_complexity 1 27 0 357 134 12 24 chr5 12210925 12211007 -190874525 + (TAGA)n Simple_repeat Simple_repeat 4 84 0 192 152 0 0 chr5 12211053 12211086 -190874446 + GA-rich Low_complexity Low_complexity 3 35 0 2270 60 0 0 chr5 12211517 12211798 -190873734 - L1PA7 LINE L1 -8 6146 5866 227 203 17 0 chr5 12214601 12214660 -190870872 + CT-rich Low_complexity Low_complexity 1 60 0 328 298 89 0 chr5 12214954 12215078 -190870454 - L2 LINE L2 0 3313 3179 186 375 0 0 chr5 12215617 12215681 -190869851 - L2 LINE L2 -298 2974 2911 2075 137 42 28 chr5 12216038 12216397 -190869135 - THE1B LTR MaLR 0 364 1 430 374 40 34 chr5 12216673 12216994 -190868538 + L2 LINE L2 2325 2647 -667 1135 36 0 0 chr5 12217351 12217488 -190868044 - L1PA5 LINE L1 0 6154 6018 215 226 170 0 chr5 12217740 12217793 -190867739 + L2 LINE L2 3186 3247 -25 712 256 103 38 chr5 12218166 12218564 -190866968 + MER45B DNA AcHobo 3 424 -616 * 974 217 46 11 chr5 12218563 12218844 -190866688 + MER45R DNA AcHobo 1291 1581 0 1442 184 7 47 chr5 12218929 12219228 -190866304 + AluJb SINE Alu 1 287 -25 292 324 89 11 chr5 12220472 12220651 -190864881 + HAL1b LINE L1 247 439 -909 434 288 70 77 chr5 12220761 12221179 -190864353 - MLT1J LTR MaLR -10 501 6 440 327 101 19 chr5 12222081 12222677 -190862855 + L1M4 LINE L1 4193 4837 -1309 254 252 86 7 chr5 12223080 12223219 -190862313 + L1ME LINE L1 4366 4515 -1631 236 269 2 30 chr5 12223214 12223320 -190862212 + L1ME LINE L1 5318 5420 -701 * 526 266 27 73 chr5 12223347 12223536 -190861996 + L1ME LINE L1 5508 5648 -522 2167 116 3 0 chr5 12223536 12223839 -190861693 - AluSx SINE Alu -6 306 3 526 266 27 73 chr5 12223839 12223883 -190861649 + L1ME LINE L1 5648 5692 -478 754 285 64 13 chr5 12224047 12224440 -190861092 - L1M4 LINE L1 -1556 4590 4178 368 298 81 44 chr5 12224449 12224699 -190860833 - L1MEd LINE L1 -4688 1622 1383 2332 66 0 3 chr5 12224699 12224986 -190860546 - AluY SINE Alu -5 306 21 368 298 81 44 chr5 12224986 12225589 -190859943 - L1MEd LINE L1 -4927 1383 708 5374 238 61 51 chr5 12225905 12229289 -190856243 - L1MC2 LINE L1 -12 6612 3195 3026 147 18 110 chr5 12229299 12230043 -190855489 - L1MA7 LINE L1 -22 6269 5595 253 190 0 0 chr5 12230062 12230120 -190855412 - L1MC2 LINE L1 -3234 3192 3135 4093 49 8 0 chr5 12230317 12230831 -190854701 - L1PA5 LINE L1 -1 6153 5636 1071 269 60 8 chr5 12230836 12231590 -190853942 - L1MC2 LINE L1 -4390 2217 1230 783 337 52 30 chr5 12231889 12232447 -190853085 - ERVL LTR ERVL -1053 4640 4032 2108 145 34 8 chr5 12232504 12232855 -190852677 + THE1C LTR MaLR 1 360 -15 1877 159 26 34 chr5 12232984 12233362 -190852170 + THE1C LTR MaLR 1 375 0 251 277 30 0 chr5 12233546 12233647 -190851885 - ERVL LTR ERVL -1731 3265 3162 6391 96 8 4 chr5 12233952 12234909 -190850623 + L1PA10 LINE L1 5200 6159 -9 1106 171 0 0 chr5 12234909 12235090 -190850442 + AluJb SINE Alu 129 309 -3 21 0 0 0 chr5 12236304 12236325 -190849207 + AT_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr5 12237192 12237222 -190848310 + AT_rich Low_complexity Low_complexity 1 30 0 2305 127 50 21 chr5 12237815 12238029 -190847503 - L1PA13 LINE L1 -3 6160 5954 2366 75 0 3 chr5 12238029 12238321 -190847211 - AluY SINE Alu -9 302 12 2305 127 50 21 chr5 12238321 12238530 -190847002 - L1PA13 LINE L1 -209 5954 5725 1992 131 0 42 chr5 12238527 12238809 -190846723 + L1P4 LINE L1 5410 5677 -491 * 2457 65 7 10 chr5 12238809 12239118 -190846414 + AluY SINE Alu 4 311 0 1992 131 0 42 chr5 12239118 12239171 -190846361 + L1P4 LINE L1 5677 5731 -437 23 0 0 0 chr5 12242100 12242123 -190843409 + AT_rich Low_complexity Low_complexity 1 23 0 2780 13 0 0 chr5 12242338 12242641 -190842891 + AluYa5 SINE Alu 1 303 -8 498 212 10 0 chr5 12244225 12244324 -190841208 - MER94 DNA DNA -33 101 2 261 83 0 0 chr5 12245130 12245166 -190840366 + (T)n Simple_repeat Simple_repeat 1 36 0 390 271 100 29 chr5 12245173 12245343 -190840189 + L1ME1 LINE L1 5911 6092 -74 7608 27 0 70 chr5 12245365 12246470 -190839062 - L1PA3 LINE L1 -3 6152 5073 2484 129 6 3 chr5 12246917 12247280 -190838252 - THE1B LTR MaLR 0 364 1 1147 230 34 73 chr5 12249029 12249412 -190836120 - MLT1A2 LTR MaLR -6 368 1 536 217 70 0 chr5 12250069 12250198 -190835334 + L1MC3 LINE L1 36 173 -6223 * 1033 154 0 6 chr5 12250197 12250372 -190835160 - L1P LINE L1 -1387 4759 4586 196 214 0 24 chr5 12250372 12250414 -190835118 + MER5A DNA MER1_type 148 188 -1 1266 168 39 0 chr5 12250434 12250666 -190834866 + L1MB3 LINE L1 5664 5904 -279 1889 141 14 4 chr5 12250669 12250946 -190834586 + AluSq SINE Alu 1 280 -33 414 0 0 0 chr5 12250946 12250992 -190834540 + (CA)n Simple_repeat Simple_repeat 1 46 0 524 300 22 11 chr5 12250992 12251172 -190834360 + L1MC3 LINE L1 160 341 -6055 850 246 97 8 chr5 12251300 12251548 -190833984 + MER57A LTR ERV1 132 401 -2 893 224 110 24 chr5 12252599 12252982 -190832550 + MER57-int LTR ERV1 1040 1455 -3481 6520 31 4 0 chr5 12253036 12253806 -190831726 - L1PA4 LINE L1 0 6155 5383 4428 28 4 0 chr5 12253802 12254344 -190831188 - L1PA4 LINE L1 -2505 3641 3098 * 234 0 0 0 chr5 12254480 12254506 -190831026 + (TA)n Simple_repeat Simple_repeat 2 27 0 602 208 26 106 chr5 12254664 12254826 -190830706 + MER57-int LTR ERV1 2331 2504 -2619 1853 168 0 0 chr5 12254826 12255100 -190830432 + AluSx SINE Alu 11 284 -28 378 0 0 0 chr5 12255104 12255146 -190830386 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 602 208 26 106 chr5 12255146 12255242 -190830290 + MER57-int LTR ERV1 2507 2573 -2550 404 266 37 27 chr5 12255214 12255402 -190830130 + MER57-int LTR ERV1 2457 2646 -2290 * 1077 198 20 41 chr5 12255477 12255785 -190829747 + MER57-int LTR ERV1 3339 5488 -1498 390 196 33 22 chr5 12255785 12255877 -190829655 + Alu SINE Alu 202 294 -7 1053 236 14 82 chr5 12256535 12256939 -190828593 + MER57-int LTR ERV1 5830 6387 -1357 986 339 37 55 chr5 12257411 12257681 -190827851 + MER57-int LTR ERV1 6232 6505 -1032 2137 112 3 7 chr5 12257681 12257977 -190827555 + AluSg SINE Alu 1 295 -15 986 339 37 55 chr5 12257977 12258642 -190826890 + MER57-int LTR ERV1 6505 7151 -386 717 268 80 23 chr5 12258691 12259045 -190826487 + MER57A LTR ERV1 69 389 -14 792 281 79 76 chr5 12259083 12259664 -190825868 + L1MC3 LINE L1 360 942 -5454 939 259 128 34 chr5 12259691 12260073 -190825459 + L1MCb LINE L1 12 429 -5616 1368 286 65 19 chr5 12260159 12261146 -190824386 + L1MCb LINE L1 2732 3763 -2801 2174 279 63 21 chr5 12261391 12262556 -190822976 + L1MC3 LINE L1 2383 3596 -2619 872 299 63 0 chr5 12262569 12262933 -190822599 + L1MC3 LINE L1 3797 4183 -2032 198 50 75 0 chr5 12262933 12262973 -190822559 + (TA)n Simple_repeat Simple_repeat 1 43 0 275 130 65 11 chr5 12263006 12263098 -190822434 + (TA)n Simple_repeat Simple_repeat 1 97 0 5452 227 65 16 chr5 12263100 12263738 -190821794 + L1MC3 LINE L1 4876 5481 -734 201 74 0 0 chr5 12263738 12263765 -190821767 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 5452 227 65 16 chr5 12263765 12264643 -190820889 + L1MC3 LINE L1 5481 5091 -1124 282 116 0 0 chr5 12264643 12264686 -190820846 + (CA)n Simple_repeat Simple_repeat 2 44 0 5452 227 65 16 chr5 12264686 12265089 -190820443 + L1MC3 LINE L1 5090 5472 -743 1461 221 98 51 chr5 12265090 12265557 -190819975 - MLT1D LTR MaLR 0 505 17 198 71 0 0 chr5 12265568 12265596 -190819936 + (CA)n Simple_repeat Simple_repeat 2 29 0 263 143 0 100 chr5 12265602 12265672 -190819860 + L1MC3 LINE L1 6946 7008 -846 282 106 21 0 chr5 12265695 12265742 -190819790 - L1MA9 LINE L1 -1 6311 6264 568 207 67 0 chr5 12265745 12265895 -190819637 + L1MC3 LINE L1 7014 7173 -681 1168 237 20 4 chr5 12265925 12266366 -190819166 + L1MC3 LINE L1 7274 7807 -47 697 280 45 48 chr5 12266395 12266978 -190818554 + L1MEc LINE L1 1000 1580 -4816 2586 99 8 0 chr5 12267032 12267384 -190818148 + THE1A LTR MaLR 1 355 0 11241 100 12 2 chr5 12267384 12267863 -190817669 + THE1A-int LTR MaLR 1 474 -1106 225 0 0 0 chr5 12267863 12267888 -190817644 + (CAAA)n Simple_repeat Simple_repeat 4 28 0 11241 100 12 2 chr5 12267888 12268972 -190816560 + THE1A-int LTR MaLR 474 1580 0 2479 85 9 0 chr5 12268972 12269300 -190816232 + THE1A LTR MaLR 1 331 -24 840 105 0 0 chr5 12269341 12269455 -190816077 + THE1A LTR MaLR 1 114 -241 1450 245 64 52 chr5 12269507 12270173 -190815359 + L1MEc LINE L1 1670 2326 -3889 424 126 10 39 chr5 12270173 12270276 -190815256 + L1MA9 LINE L1 6202 6301 -11 1450 245 64 52 chr5 12270276 12270344 -190815188 + L1MEc LINE L1 2326 2392 -3823 2075 100 60 0 chr5 12270344 12270625 -190814907 - AluSq SINE Alu -15 298 1 1450 245 64 52 chr5 12270625 12270796 -190814736 + L1MEc LINE L1 2392 2549 -3666 1416 130 5 0 chr5 12271397 12271597 -190813935 - AluSp SINE Alu -5 308 108 1857 283 49 33 chr5 12271713 12272720 -190812812 + L1MEc LINE L1 3391 4413 -1802 1171 202 27 12 chr5 12272738 12272995 -190812537 + MLT1B LTR MaLR 130 390 0 591 263 38 19 chr5 12273042 12273308 -190812224 + L1MEc LINE L1 5027 5297 -918 40 37 0 0 chr5 12273360 12273414 -190812118 + AT_rich Low_complexity Low_complexity 1 54 0 8861 192 56 20 chr5 12273468 12276098 -190809434 + L1M1 LINE L1 2920 5658 -642 2024 142 3 6 chr5 12276146 12276497 -190809035 - AluSq SINE Alu 0 350 1 235 180 0 0 chr5 12276515 12276565 -190808967 + L1MA10 LINE L1 6282 6331 -3 4056 158 20 4 chr5 12277313 12278020 -190807512 - L1PA16 LINE L1 -5 6161 5444 237 196 0 0 chr5 12279225 12279276 -190806256 + (CATATA)n Simple_repeat Simple_repeat 2 52 0 2475 64 0 0 chr5 12279864 12280160 -190805372 + AluY SINE Alu 1 296 -15 1330 248 85 25 chr5 12280675 12281110 -190804422 + MLT1F LTR MaLR 82 542 0 184 328 0 16 chr5 12285781 12285842 -190799690 + MIR SINE MIR 74 133 -75 1492 228 35 68 chr5 12286881 12287292 -190798240 + MLT1C LTR MaLR 1 395 -72 543 190 112 9 chr5 12287292 12287408 -190798124 - FLAM_A SINE Alu -1 132 5 1492 228 35 68 chr5 12287408 12287479 -190798053 + MLT1C LTR MaLR 395 467 0 1571 168 31 25