3248 178 53 14 chr4 0 958 -202327389 + L1 LINE L1 2957 3998 -2148 2292 84 7 10 chr4 958 1257 -202327090 + AluSq SINE Alu 1 298 -15 3248 178 53 14 chr4 1257 1343 -202327004 + L1 LINE L1 3998 4079 -2067 299 116 0 0 chr4 1443 1486 -202326861 + AluSc SINE Alu 247 289 -10 459 262 128 0 chr4 1503 1675 -202326672 - MER33 DNA MER1_type -129 195 2 707 206 14 27 chr4 1880 2026 -202326321 - MER61D LTR ERV1 -20 481 338 2071 123 0 0 chr4 2493 2803 -202325544 - AluSc SINE Alu 0 312 3 3644 127 37 0 chr4 3061 3638 -202324709 - MER51C LTR ERV1 0 640 1 2443 66 0 3 chr4 3955 4257 -202324090 - AluSc SINE Alu -8 301 1 265 313 20 30 chr4 6163 6262 -202322085 - MIR3 SINE MIR -28 180 83 552 237 87 27 chr4 6965 7184 -202321163 - L2 LINE L2 -5 3308 3077 235 241 72 0 chr4 8217 8300 -202320047 + L1MC4a LINE L1 5347 5435 -727 195 322 0 0 chr4 8429 8488 -202319859 + L2 LINE L2 2562 2620 -694 186 295 92 46 chr4 8638 8855 -202319492 + L2 LINE L2 2818 3044 -228 316 290 59 32 chr4 8864 9050 -202319297 + L1MC4a LINE L1 5740 5930 -1878 369 0 0 0 chr4 9079 9120 -202319227 + (CA)n Simple_repeat Simple_repeat 2 42 0 22 56 0 0 chr4 9196 9232 -202319115 + AT_rich Low_complexity Low_complexity 1 36 0 239 139 0 23 chr4 9486 9529 -202318818 - L1M4 LINE L1 -5660 882 841 1062 238 155 32 chr4 9829 10472 -202317875 + L1MB8 LINE L1 1386 2384 -4441 1599 198 44 68 chr4 10506 10672 -202317675 + L1MB8 LINE L1 6159 6327 -349 2410 91 3 7 chr4 10672 10981 -202317366 - AluSp SINE Alu -5 308 1 1599 198 44 68 chr4 10981 11268 -202317079 + L1MB8 LINE L1 6327 6601 -75 3534 125 0 4 chr4 11438 11950 -202316397 + MER9 LTR ERVK 1 510 -1 287 308 56 0 chr4 13402 13509 -202314838 + MIR SINE MIR 31 143 -119 353 252 220 13 chr4 13605 13918 -202314429 + L2 LINE L2 2871 3248 -65 224 147 26 58 chr4 13945 14138 -202314209 + (CAGAGA)n Simple_repeat Simple_repeat 1 186 0 228 179 13 51 chr4 14050 14128 -202314219 + (CAGAA)n Simple_repeat Simple_repeat 5 79 0 667 230 0 14 chr4 14754 14893 -202313454 + AluJo SINE Alu 2 138 -174 1303 148 0 48 chr4 16343 16572 -202311775 - AluJo SINE Alu -13 299 82 555 282 12 0 chr4 17403 17573 -202310774 + L1MB2 LINE L1 16 187 -6355 539 110 37 0 chr4 17709 17791 -202310556 - AluSc SINE Alu -224 85 1 2187 106 3 6 chr4 17847 18158 -202310189 + AluY SINE Alu 2 311 0 508 255 98 76 chr4 18163 19056 -202309291 + L1MB2 LINE L1 2416 3331 -3313 1408 99 0 35 chr4 19063 19264 -202309083 + AluYa5 SINE Alu 103 296 -15 442 293 68 8 chr4 19300 19566 -202308781 + L1MA8 LINE L1 4527 4808 -1338 750 287 126 2 chr4 19600 20014 -202308333 + L1MB2 LINE L1 5675 6139 -32 1786 185 65 120 chr4 20144 21270 -202307077 + L1MA8 LINE L1 4884 5937 -354 226 284 0 25 chr4 21273 21354 -202306993 + L1MB2 LINE L1 5544 5622 -1022 2391 80 0 3 chr4 21461 21763 -202306584 + AluY SINE Alu 1 301 -10 360 0 0 0 chr4 21763 21803 -202306544 + (TA)n Simple_repeat Simple_repeat 2 41 0 404 246 103 17 chr4 21803 21978 -202306369 + L1MB2 LINE L1 6147 6336 -345 3870 98 72 3 chr4 21981 22552 -202305795 + LTR66 LTR ERVL 1 610 0 13495 98 7 1 chr4 22552 24338 -202304009 + HERVL66 LTR ERVL 1 1797 -2532 313 71 54 71 chr4 24318 24374 -202303973 + HERVL66 LTR ERVL 2654 2708 -1621 * 5097 74 5 12 chr4 24365 25503 -202302844 + HERVL66 LTR ERVL 3064 4329 0 4018 83 88 4 chr4 25503 26059 -202302288 + LTR66 LTR ERVL 1 603 -7 2135 96 4 7 chr4 26104 26376 -202301971 + AluSc SINE Alu 13 283 -26 490 309 75 10 chr4 26400 26695 -202301652 + L1MB2 LINE L1 6352 6665 -4 1013 86 0 0 chr4 26946 27074 -202301273 + AluSg/x SINE Alu 170 297 -15 1857 168 28 39 chr4 27074 27262 -202301085 - MSTA LTR MaLR -66 362 178 2354 83 0 32 chr4 27262 27574 -202300773 + AluY SINE Alu 1 302 -9 1857 168 28 39 chr4 27574 27749 -202300598 - MSTA LTR MaLR -250 178 3 808 270 41 4 chr4 27750 28020 -202300327 + L1MB1 LINE L1 5712 5991 -177 269 287 40 30 chr4 28018 28119 -202300228 + L1 LINE L1 125 226 -5729 * 881 293 115 45 chr4 28123 28741 -202299606 + L1 LINE L1 189 849 -5106 1177 231 49 81 chr4 28767 29030 -202299317 + L1 LINE L1 3963 4233 -1801 658 227 0 0 chr4 29030 29158 -202299189 - FLAM_C SINE Alu -4 129 2 1177 231 49 81 chr4 29158 29486 -202298861 + L1 LINE L1 4233 4535 -1499 1223 124 43 0 chr4 29607 29792 -202298555 + AluY SINE Alu 119 311 0 740 211 45 0 chr4 29796 29952 -202298395 - LTR56 LTR ERV1 -282 163 1 7520 39 5 1 chr4 30071 31181 -202297166 + L1PA5 LINE L1 5035 6147 -7 1264 239 48 5 chr4 31557 32081 -202296266 - MER67C LTR ERV1 -4 706 101 420 121 0 0 chr4 32085 32143 -202296204 + AluSx SINE Alu 4 61 -251 4677 25 9 5 chr4 32143 32699 -202295648 + LTR6B LTR ERV1 1 558 0 1676 97 13 4 chr4 32703 32941 -202295406 + AluSx SINE Alu 62 301 -11 237 81 27 0 chr4 32942 32979 -202295368 - MER67C LTR ERV1 -604 106 69 314 279 90 34 chr4 33738 34082 -202294265 - MER21B LTR ERV1 -75 856 416 966 221 100 7 chr4 35197 35477 -202292870 - MER33 DNA MER1_type -14 310 5 662 228 13 27 chr4 35680 35829 -202292518 - MER61D LTR ERV1 -17 484 338 3523 120 55 5 chr4 36539 37112 -202291235 - MER51C LTR ERV1 0 640 1 1278 291 77 7 chr4 37301 37741 -202290606 - MLT1H LTR MaLR -72 477 7 430 240 23 76 chr4 38416 38587 -202289760 + MER5B DNA MER1_type 1 162 -16 373 98 0 33 chr4 39000 39061 -202289286 - Alu SINE Alu -7 294 236 299 226 0 47 chr4 39146 39252 -202289095 - L1ME3A LINE L1 -2 6168 6068 2412 86 0 3 chr4 39479 39783 -202288564 - AluY SINE Alu -8 303 1 195 218 55 0 chr4 39976 40031 -202288316 - MER5A DNA MER1_type -76 113 56 2265 92 7 13 chr4 41623 41929 -202286418 + AluY SINE Alu 1 304 -7 2432 83 3 0 chr4 41939 42239 -202286108 + AluSp SINE Alu 2 302 -11 1156 248 6 58 chr4 42456 42596 -202285751 + AluJb SINE Alu 2 148 -154 2252 116 0 0 chr4 42596 42888 -202285459 + AluSg SINE Alu 1 292 -18 1156 248 6 58 chr4 42888 43058 -202285289 + AluJb SINE Alu 148 296 -6 394 192 0 19 chr4 43186 43290 -202285057 + GA-rich Low_complexity Low_complexity 2 103 0 2339 176 18 17 chr4 43325 43963 -202284384 + L1P4 LINE L1 5044 5680 -486 * 7838 108 12 2 chr4 43960 45037 -202283310 - THE1B-int LTR MaLR -492 1088 1 2004 123 77 40 chr4 45037 45388 -202282959 - THE1B LTR MaLR 0 364 1 1161 257 75 32 chr4 45686 46323 -202282024 - L2 LINE L2 -36 3277 2624 333 162 0 0 chr4 47322 47390 -202280957 + (TCCA)n Simple_repeat Simple_repeat 3 70 0 2331 107 0 0 chr4 47684 47984 -202280363 - AluSc SINE Alu -9 300 1 265 256 174 25 chr4 48031 48152 -202280195 + MIR3 SINE MIR 7 145 -63 2014 123 41 3 chr4 48406 48698 -202279649 - AluSg SINE Alu -7 303 1 2091 120 6 35 chr4 49061 49378 -202278969 + AluSq SINE Alu 1 308 -5 2423 91 0 3 chr4 49981 50290 -202278057 + AluY SINE Alu 2 309 -2 2512 76 3 0 chr4 50290 50592 -202277755 + AluSp SINE Alu 1 303 -10 434 165 10 39 chr4 51242 51345 -202277002 + SVA Other Other 583 682 -704 2362 106 0 0 chr4 51582 51883 -202276464 + AluSg SINE Alu 1 301 -9 1149 203 44 0 chr4 51915 52210 -202276137 + L1MA7 LINE L1 5981 6288 -3 2112 124 3 7 chr4 52425 52731 -202275616 - AluSx SINE Alu -7 305 1 1394 183 0 0 chr4 53043 53273 -202275074 + AluSx SINE Alu 64 293 -19 314 333 49 25 chr4 53328 53532 -202274815 + L1M4 LINE L1 4744 4952 -1194 1688 271 90 33 chr4 53548 53771 -202274576 + L1M4 LINE L1 3435 3644 -2502 1894 130 45 3 chr4 53771 54063 -202274284 + AluY SINE Alu 1 304 -7 1688 271 90 33 chr4 54063 54412 -202273935 + L1M4 LINE L1 3644 3971 -2175 2439 88 0 0 chr4 54412 54717 -202273630 + AluY SINE Alu 1 305 -6 1688 271 90 33 chr4 54717 55265 -202273082 + L1M4 LINE L1 3971 4642 -1504 2362 79 9 25 chr4 55265 55582 -202272765 - AluSp SINE Alu -1 312 1 1688 271 90 33 chr4 55582 55742 -202272605 + L1M4 LINE L1 4642 4791 -1355 6495 248 27 17 chr4 55751 57981 -202270366 + L1PA12 LINE L1 178 3221 -4363 2549 151 37 31 chr4 57981 58470 -202269877 + LTR22B LTR ERVK 1 492 0 6495 248 27 17 chr4 58470 58506 -202269841 + L1PA12 LINE L1 3221 3255 -4329 2160 106 3 3 chr4 58517 58800 -202269547 + AluSq SINE Alu 1 283 -30 456 67 0 0 chr4 58802 58862 -202269485 + (CATA)n Simple_repeat Simple_repeat 2 61 0 7400 85 17 19 chr4 58865 59874 -202268473 - LTR13 LTR ERVK 0 1007 1 1127 306 62 35 chr4 59887 60245 -202268102 - L1M4 LINE L1 -1744 4402 4055 2507 82 0 0 chr4 60245 60548 -202267799 - AluSg SINE Alu -7 303 1 1127 306 62 35 chr4 60548 60815 -202267532 - L1M4 LINE L1 -2091 4055 3796 2349 94 3 3 chr4 60815 61114 -202267233 - AluSc SINE Alu -10 299 1 1127 306 62 35 chr4 61114 61364 -202266983 - L1M4 LINE L1 -2350 3796 3503 302 309 133 21 chr4 61437 61625 -202266722 - L1M4 LINE L1 -1194 4952 4744 2269 111 0 0 chr4 61663 61960 -202266387 - AluSq SINE Alu -12 301 5 1326 192 0 0 chr4 61969 62209 -202266138 - AluJo SINE Alu -12 300 61 21 36 0 0 chr4 62267 62295 -202266052 + AT_rich Low_complexity Low_complexity 1 28 0 1981 100 8 0 chr4 62295 62554 -202265793 + AluSq SINE Alu 1 261 -52 23 68 0 0 chr4 62782 62826 -202265521 + AT_rich Low_complexity Low_complexity 1 44 0 22 56 0 0 chr4 62985 63021 -202265326 + AT_rich Low_complexity Low_complexity 1 36 0 2044 139 0 0 chr4 63021 63326 -202265021 + AluSx SINE Alu 1 305 0 278 254 164 25 chr4 63743 63865 -202264482 - MIR3 SINE MIR -63 145 7 237 221 0 0 chr4 64293 64361 -202263986 + (TGGA)n Simple_repeat Simple_repeat 3 70 0 532 240 190 14 chr4 65258 65479 -202262868 - MIR SINE MIR -1 261 2 335 231 0 23 chr4 66692 66822 -202261525 + (TG)n Simple_repeat Simple_repeat 2 128 0 277 281 76 67 chr4 67810 68152 -202260195 + MER21A LTR ERV1 512 856 -75 1715 250 149 5 chr4 68824 69440 -202258907 + MER67C LTR ERV1 1 705 -5 2339 144 64 9 chr4 69901 70323 -202258024 + LTR56 LTR ERV1 1 445 0 2316 71 27 7 chr4 70350 70644 -202257703 - AluSg SINE Alu -10 300 1 187 324 14 14 chr4 71774 71845 -202256502 + MER5A DNA MER1_type 31 101 -88 2593 65 0 0 chr4 72726 73034 -202255313 + AluY SINE Alu 1 308 -3 23 0 0 0 chr4 73591 73614 -202254733 + AT_rich Low_complexity Low_complexity 1 23 0 2481 82 0 0 chr4 73796 74102 -202254245 + AluSc SINE Alu 1 306 -3 1218 82 54 22 chr4 74685 74785 -202253562 + MER30B DNA MER1_type 1 111 -79 1910 101 4 0 chr4 74785 75033 -202253314 + AluSp SINE Alu 57 305 -8 1218 82 54 22 chr4 75033 75116 -202253231 + MER30B DNA MER1_type 111 190 0 494 188 99 35 chr4 75374 75577 -202252770 - MER6 DNA MER2_type -1 864 -65 2066 176 86 117 chr4 75608 76121 -202252226 - L1MA9 LINE L1 -26 6286 5758 242 133 0 0 chr4 76121 76166 -202252181 - LTR66 LTR ERVL -172 438 394 2066 176 86 117 chr4 76166 76314 -202252033 - L1MA9 LINE L1 -554 5758 5607 2275 115 3 0 chr4 76314 76619 -202251728 - AluSp SINE Alu -7 306 1 2475 70 0 0 chr4 76622 76921 -202251426 - AluY SINE Alu -12 299 1 2066 176 86 117 chr4 76921 77004 -202251343 - L1MA9 LINE L1 -707 5605 5518 850 209 37 81 chr4 77007 77134 -202251213 - L1MA9 LINE L1 -780 5366 5235 2080 117 21 0 chr4 77134 77424 -202250923 - AluY SINE Alu -15 296 1 850 209 37 81 chr4 77424 77678 -202250669 - L1MA9 LINE L1 -911 5235 5002 2138 105 0 51 chr4 77712 78025 -202250322 + AluSx SINE Alu 2 298 -14 1179 227 51 78 chr4 78027 78432 -202249915 - L1MA9 LINE L1 -1422 4724 4338 658 227 0 0 chr4 78432 78560 -202249787 + FLAM_C SINE Alu 2 129 -4 1179 227 51 78 chr4 78560 78744 -202249603 - L1MA9 LINE L1 -1808 4338 4151 732 266 24 34 chr4 78844 79051 -202249296 - L1M4b LINE L1 -6638 221 17 258 310 54 29 chr4 79579 79818 -202248529 + L1M4 LINE L1 4741 4985 -1161 587 280 54 16 chr4 79865 80227 -202248120 - L1MC5 LINE L1 -48 7913 7494 464 286 7 0 chr4 80262 80402 -202247945 - L1MC5 LINE L1 -1171 6790 6650 280 250 0 50 chr4 80955 81055 -202247292 + L1ME3A LINE L1 6068 6162 -8 1566 111 0 0 chr4 81111 81318 -202247029 - AluSc SINE Alu -15 294 88 8786 63 2 3 chr4 81318 82390 -202245957 + MER11C LTR ERVK 1 1071 0 435 127 0 0 chr4 82404 82467 -202245880 - AluS SINE Alu -247 64 2 336 227 40 0 chr4 82925 83000 -202245347 - MER5B DNA MER1_type -16 162 85 2267 78 0 4 chr4 83001 83282 -202245065 + AluSc SINE Alu 13 292 -17 509 325 68 24 chr4 83400 83652 -202244695 + L1M3a LINE L1 192 454 -5501 424 320 37 0 chr4 83654 83859 -202244488 + L1M3a LINE L1 550 736 -5219 * 1779 276 42 47 chr4 83837 84558 -202243789 + L1M3a LINE L1 344 944 -5011 2167 116 3 0 chr4 84558 84852 -202243495 + AluSx SINE Alu 1 295 -17 1779 276 42 47 chr4 84852 84880 -202243467 + L1M3a LINE L1 944 971 -4984 * 25330 88 8 10 chr4 84873 85541 -202242806 + L1PA7 LINE L1 1712 2380 -3774 2374 78 0 7 chr4 85541 85834 -202242513 + AluY SINE Alu 1 291 -20 25330 88 8 10 chr4 85834 87584 -202240763 + L1PA7 LINE L1 2380 4133 -2021 2347 105 0 0 chr4 87584 87879 -202240468 + AluSx SINE Alu 1 295 -17 25330 88 8 10 chr4 87879 89913 -202238434 + L1PA7 LINE L1 4133 6154 0 568 229 93 19 chr4 89918 90182 -202238165 + L1M3a LINE L1 945 1238 -4727 2247 106 7 0 chr4 90182 90483 -202237864 + AluSx SINE Alu 1 303 -9 568 229 93 19 chr4 90483 90542 -202237805 + L1M3a LINE L1 1238 1291 -4674 421 178 14 0 chr4 90660 90733 -202237614 + AluJo SINE Alu 61 134 -168 2156 104 7 20 chr4 90791 91090 -202237257 + AluY SINE Alu 1 295 -16 1453 224 0 14 chr4 91094 91388 -202236959 + AluJb SINE Alu 1 290 -22 1574 77 39 0 chr4 91490 91697 -202236650 + AluY SINE Alu 97 311 0 333 210 50 0 chr4 91698 91798 -202236549 + Charlie5 DNA MER1_type 2467 2571 -41 1163 117 0 0 chr4 92007 92170 -202236177 + AluSg/x SINE Alu 137 299 -13 1966 118 30 0 chr4 92345 92636 -202235711 + AluSg SINE Alu 1 299 0 1385 86 34 75 chr4 92936 93072 -202235275 - MER4-int LTR ERV1 -2506 4092 3971 2406 78 0 28 chr4 93072 93392 -202234955 + AluY SINE Alu 1 311 0 1385 86 34 75 chr4 93392 93522 -202234825 - MER4-int LTR ERV1 -2627 3971 3837 6234 99 149 148 chr4 93577 94596 -202233751 - MER4-int LTR ERV1 -3065 3533 2517 2001 154 0 20 chr4 94596 94901 -202233446 + AluSx SINE Alu 1 299 -13 6234 99 149 148 chr4 94901 95381 -202232966 - MER4-int LTR ERV1 -4081 2517 2039 574 67 0 0 chr4 95381 95456 -202232891 - Alu SINE Alu -12 297 223 2372 73 0 17 chr4 95383 95685 -202232662 - AluY SINE Alu -14 297 1 6234 99 149 148 chr4 95685 96093 -202232254 - MER4-int LTR ERV1 -4788 1810 1404 2343 62 31 0 chr4 96093 96381 -202231966 - AluY SINE Alu -14 297 1 6234 99 149 148 chr4 96381 96659 -202231688 - MER4-int LTR ERV1 -5194 1404 532 2214 100 0 10 chr4 96802 97101 -202231246 - AluSc SINE Alu -13 296 1 647 103 31 0 chr4 97102 97199 -202231148 - MER4-int LTR ERV1 -5506 1092 993 232 178 0 44 chr4 97219 97264 -202231083 - LTR49 LTR ERV1 -282 313 271 260 95 0 0 chr4 97297 97339 -202231008 - MER4-int LTR ERV1 -5872 726 685 407 137 14 27 chr4 97367 97440 -202230907 - MER4-int LTR ERV1 -5788 810 739 287 136 27 55 chr4 97784 97894 -202230453 - MER4-int LTR ERV1 -5925 673 567 2000 118 20 3 chr4 98182 98479 -202229868 + AluSg SINE Alu 3 304 -6 216 0 0 0 chr4 98798 98822 -202229525 + (A)n Simple_repeat Simple_repeat 1 24 0 183 211 58 19 chr4 99470 99522 -202228825 + L2 LINE L2 3175 3228 -85 635 146 89 8 chr4 100411 100534 -202227813 - LTR23 LTR ERV1 -5 432 300 252 184 0 0 chr4 100534 100583 -202227764 + (TA)n Simple_repeat Simple_repeat 2 50 0 266 281 0 0 chr4 100584 100673 -202227674 - L1MC4 LINE L1 -1339 6703 6615 195 184 0 0 chr4 100684 100722 -202227625 + (TA)n Simple_repeat Simple_repeat 1 38 0 26 0 0 0 chr4 100917 100943 -202227404 + AT_rich Low_complexity Low_complexity 1 26 0 207 0 0 0 chr4 100995 101018 -202227329 + (T)n Simple_repeat Simple_repeat 1 23 0 2200 110 10 0 chr4 101337 101636 -202226711 - AluSg SINE Alu -6 304 3 221 340 88 25 chr4 102002 102161 -202226186 - MER5B DNA MER1_type -1 177 9 1258 144 16 0 chr4 103839 104026 -202224321 + MER30B DNA MER1_type 1 190 0 281 134 71 189 chr4 104262 104326 -202224021 - MER6 DNA MER2_type -17 848 805 1910 135 7 7 chr4 104326 104614 -202223733 + AluSg SINE Alu 1 288 -22 281 134 71 189 chr4 104614 104676 -202223671 - MER6 DNA MER2_type -60 805 737 1795 172 43 91 chr4 104772 105301 -202223046 - L1MA9 LINE L1 -26 6286 5783 317 241 0 23 chr4 105290 105377 -202222970 - L1MC4 LINE L1 -1344 6698 6614 * 23 0 0 0 chr4 106086 106109 -202222238 + AT_rich Low_complexity Low_complexity 1 23 0 2463 82 0 0 chr4 106291 106597 -202221750 + AluSc SINE Alu 1 306 -3 1295 82 54 22 chr4 107180 107280 -202221067 + MER30B DNA MER1_type 1 111 -79 1903 101 4 0 chr4 107280 107528 -202220819 + AluSp SINE Alu 57 305 -8 1295 82 54 22 chr4 107528 107611 -202220736 + MER30B DNA MER1_type 111 190 0 503 188 99 35 chr4 107870 108073 -202220274 - MER6 DNA MER2_type -1 864 -65 2102 173 78 111 chr4 108104 108617 -202219730 - L1MA9 LINE L1 -26 6286 5755 249 133 0 0 chr4 108617 108662 -202219685 - LTR66 LTR ERVL -172 438 394 2102 173 78 111 chr4 108662 108808 -202219539 - L1MA9 LINE L1 -557 5755 5606 2259 115 3 0 chr4 108809 109114 -202219233 - AluSp SINE Alu -7 306 1 2333 76 0 10 chr4 109117 109419 -202218928 - AluY SINE Alu -12 299 1 247 239 56 80 chr4 109436 109649 -202218698 + L1M1 LINE L1 3343 3550 -4015 973 107 0 0 chr4 109674 109805 -202218542 - AluSg/x SINE Alu -4 308 178 943 195 6 6 chr4 110377 110551 -202217796 - MSTA LTR MaLR -254 174 1 449 211 48 160 chr4 110552 110622 -202217725 + L1MB2 LINE L1 5714 5790 -381 2373 69 16 13 chr4 110622 110927 -202217420 + AluY SINE Alu 1 306 -5 449 211 48 160 chr4 110927 111169 -202217178 + L1MB2 LINE L1 5790 5991 -180 * 934 294 64 82 chr4 111167 111540 -202216807 + L1MA9 LINE L1 125 479 -5476 2106 96 3 45 chr4 111540 111684 -202216663 + AluSg SINE Alu 1 149 -161 2217 74 42 0 chr4 111684 111967 -202216380 + AluY SINE Alu 2 296 -15 2106 96 3 45 chr4 111967 112135 -202216212 + AluSg SINE Alu 149 300 -10 934 294 64 82 chr4 112135 112500 -202215847 + L1MA9 LINE L1 479 849 -5106 2908 216 67 89 chr4 112529 112787 -202215560 + L1MA9 LINE L1 3954 4216 -1818 675 241 0 0 chr4 112787 112920 -202215427 - FLAM_C SINE Alu 0 133 1 2908 216 67 89 chr4 112920 113578 -202214769 + L1MA9 LINE L1 4216 4887 -1147 2300 73 7 3 chr4 113578 113866 -202214481 - AluY SINE Alu -21 290 2 2908 216 67 89 chr4 113866 114152 -202214195 + L1MA9 LINE L1 4887 5178 -856 1714 140 4 4 chr4 114152 114426 -202213921 + AluSp SINE Alu 36 309 0 1792 127 80 4 chr4 114426 114702 -202213645 + AluSc SINE Alu 1 297 -12 2908 216 67 89 chr4 114702 114827 -202213520 + L1MA9 LINE L1 5176 5255 -779 2292 164 104 101 chr4 114836 115588 -202212759 + L1MA9 LINE L1 5417 6170 -30 323 237 131 81 chr4 115624 115743 -202212604 + MER6B DNA MER2_type 2 136 -729 2128 109 13 3 chr4 115743 116045 -202212302 - AluSq SINE Alu -8 305 1 323 237 131 81 chr4 116045 116123 -202212224 + MER6B DNA MER2_type 136 209 -1 211 333 200 22 chr4 116846 116981 -202211366 - MER5A DNA MER1_type 0 189 31 249 288 40 56 chr4 117174 117299 -202211048 + MER93b LTR ERV1 215 337 -36 2207 110 0 3 chr4 118280 118588 -202209759 + AluSg SINE Alu 1 307 -3 2282 76 3 0 chr4 118592 118883 -202209464 + AluY SINE Alu 1 292 -19 660 313 56 47 chr4 120341 120785 -202207562 + LTR60-int LTR ERV1 6444 6891 -314 2036 78 82 3 chr4 120940 121222 -202207125 - AluY SINE Alu -6 305 2 1244 223 36 22 chr4 121321 121775 -202206572 + LTR60 LTR ERV1 1 545 -41 342 245 103 73 chr4 121637 121870 -202206477 + TAR1 Satellite telomeric 25 264 -1847 * 947 232 41 50 chr4 121923 122074 -202206273 - L1MB2 LINE L1 -170 6001 5850 414 234 15 102 chr4 122074 122211 -202206136 - FLAM_C SINE Alu -8 125 1 947 232 41 50 chr4 122211 122400 -202205947 - L1MB2 LINE L1 -321 5850 5664 230 291 9 45 chr4 122421 122456 -202205891 - L1MB2 LINE L1 -1159 4987 4952 2301 78 17 10 chr4 122456 122752 -202205595 - AluSx SINE Alu -14 298 1 230 291 9 45 chr4 122752 122826 -202205521 - L1MB2 LINE L1 -1194 4952 4882 2956 246 43 22 chr4 124082 124621 -202203726 - L1MB2 LINE L1 -2 6169 5602 1630 204 3 0 chr4 124621 124905 -202203442 - AluJb SINE Alu -25 287 3 2956 246 43 22 chr4 124905 125238 -202203109 - L1MB2 LINE L1 -569 5602 5278 570 125 42 0 chr4 125246 125342 -202203005 - AluSg/x SINE Alu 0 310 211 2107 125 0 3 chr4 125854 126150 -202202197 - AluSp SINE Alu -18 295 1 2253 107 0 0 chr4 126180 126480 -202201867 - AluSg SINE Alu -10 300 1 227 258 269 0 chr4 126551 126644 -202201703 + MER5A DNA MER1_type 56 173 -16 335 213 13 0 chr4 127080 127155 -202201192 + L1MA6 LINE L1 5866 5941 -359 231 361 0 0 chr4 127153 127261 -202201086 + L1MB2 LINE L1 5045 5152 -994 * 2117 80 20 40 chr4 127305 127604 -202200743 + AluY SINE Alu 4 296 -15 1079 295 74 15 chr4 127604 128079 -202200268 + L1MB2 LINE L1 5665 6167 -4 26 0 0 0 chr4 128323 128349 -202199998 + AT_rich Low_complexity Low_complexity 1 26 0 2141 107 6 22 chr4 128442 128759 -202199588 + AluSp SINE Alu 1 312 -1 269 174 22 0 chr4 129111 129157 -202199190 + L1M4c LINE L1 1 47 -5908 460 189 32 0 chr4 129189 129284 -202199063 - L1PBa LINE L1 -6463 400 303 24 32 0 0 chr4 131648 131679 -202196668 + AT_rich Low_complexity Low_complexity 1 31 0 2194 113 3 0 chr4 132223 132515 -202195832 + AluSq SINE Alu 1 293 -20 742 327 86 22 chr4 132518 132879 -202195468 + L1M4c LINE L1 71 454 -5501 2199 283 73 38 chr4 132891 134798 -202193549 + L1M4c LINE L1 344 1794 -4241 2204 99 7 0 chr4 134806 135099 -202193248 + AluY SINE Alu 1 295 -16 431 173 0 62 chr4 135171 135252 -202193095 + AluJo SINE Alu 61 136 -176 1710 186 0 14 chr4 135289 135574 -202192773 + AluJb SINE Alu 1 281 -31 1997 242 107 39 chr4 135616 135830 -202192517 + L1M4c LINE L1 1774 1972 -4062 2187 118 7 0 chr4 135830 136134 -202192213 + AluY SINE Alu 1 306 -5 1997 242 107 39 chr4 136134 136207 -202192140 + L1M4c LINE L1 1972 2039 -3995 1194 308 58 8 chr4 136207 136584 -202191763 + MSTD LTR MaLR 1 396 0 1997 242 107 39 chr4 136584 137508 -202190839 + L1M4c LINE L1 2039 3071 -2963 307 273 7 93 chr4 137510 137555 -202190792 - MER67C LTR ERV1 -573 137 90 2186 98 3 14 chr4 137555 137852 -202190495 + AluSg SINE Alu 1 294 -16 307 273 7 93 chr4 137852 137956 -202190391 - MER67C LTR ERV1 -620 90 1 264 122 0 0 chr4 138431 138472 -202189875 + (A)n Simple_repeat Simple_repeat 1 41 0 1485 203 0 23 chr4 138533 138834 -202189513 - AluJb SINE Alu -18 294 1 2131 51 83 11 chr4 138839 139115 -202189232 - AluY SINE Alu -15 296 1 881 283 79 6 chr4 139161 139479 -202188868 - MER21B LTR ERV1 -107 756 416 1320 223 156 31 chr4 139531 140043 -202188304 + MER92B LTR ERV1 59 634 -2 312 48 0 0 chr4 141215 141257 -202187090 + (TG)n Simple_repeat Simple_repeat 1 42 0 5159 187 51 13 chr4 141775 143478 -202184869 + L1MA3 LINE L1 4085 5722 -583 2211 54 91 0 chr4 143478 143754 -202184593 - AluY SINE Alu -10 301 1 5159 187 51 13 chr4 143754 144130 -202184217 + L1MA3 LINE L1 5722 6256 -49 2115 84 42 7 chr4 144130 144417 -202183930 + AluY SINE Alu 1 297 -14 5159 187 51 13 chr4 144417 144469 -202183878 + L1MA3 LINE L1 6256 6305 0 373 288 49 10 chr4 144895 145100 -202183247 + L1MB2 LINE L1 4639 4851 -1295 1086 257 39 12 chr4 145102 145437 -202182910 + L1MB2 LINE L1 5675 6018 -153 965 59 8 0 chr4 145485 145603 -202182744 - AluY SINE Alu -43 268 150 695 137 8 8 chr4 145613 145744 -202182603 - L1PA13 LINE L1 -4 6159 6029 1116 281 37 50 chr4 145856 145960 -202182387 + L1 LINE L1 4519 4623 -1523 2130 110 7 3 chr4 145960 146250 -202182097 - AluSg SINE Alu -17 293 3 1116 281 37 50 chr4 146250 146719 -202181628 + L1 LINE L1 4623 5084 -1062 1093 109 14 0 chr4 146719 146866 -202181481 - AluSg/x SINE Alu -16 296 148 1917 89 19 19 chr4 146867 147124 -202181223 - AluY SINE Alu -54 257 1 758 314 26 74 chr4 147194 147656 -202180691 + L1M3a LINE L1 118 557 -5398 1196 192 179 26 chr4 147861 148251 -202180096 + LTR7 LTR ERV1 1 450 0 2029 194 49 25 chr4 148251 148699 -202179648 + HERVH LTR ERV1 1 459 -7254 11594 150 9 41 chr4 148757 149580 -202178767 + HERVH LTR ERV1 800 1648 -6065 2985 13 0 0 chr4 149580 149898 -202178449 - AluYb8 SINE Alu 0 318 1 11594 150 9 41 chr4 149898 150885 -202177462 + HERVH LTR ERV1 1648 2534 -5179 2459 76 0 0 chr4 150885 151176 -202177171 + AluY SINE Alu 1 291 -20 11594 150 9 41 chr4 151176 151464 -202176883 + HERVH LTR ERV1 2534 2830 -4883 4130 135 2 5 chr4 151464 152103 -202176244 + HERVH LTR ERV1 3357 3993 -3720 2998 149 15 20 chr4 152086 152637 -202175710 + HERVH LTR ERV1 3993 5286 -1805 * 4460 125 40 38 chr4 152635 153586 -202174761 + pTR5 LTR ERV1 741 2025 -413 375 235 10 0 chr4 153586 153684 -202174663 + LTR30 LTR ERV1 544 642 -80 1546 90 5 9 chr4 153687 153910 -202174437 + pTR5 LTR ERV1 172 393 -2045 * 20375 150 5 3 chr4 153909 157160 -202171187 + HERVH LTR ERV1 4458 7713 0 1207 193 185 28 chr4 157160 157549 -202170798 + LTR7 LTR ERV1 1 450 0 3166 232 59 46 chr4 157677 157910 -202170437 + L1MA10 LINE L1 4112 4340 -1828 633 248 0 0 chr4 157910 158043 -202170304 - FLAM_C SINE Alu 0 133 1 3166 232 59 46 chr4 158043 159047 -202169300 + L1MA10 LINE L1 4340 5366 -802 1923 179 137 103 chr4 159060 159464 -202168883 + L1MA10 LINE L1 5529 5918 -416 821 126 0 22 chr4 159464 159599 -202168748 - FLAM_C SINE Alu 0 133 2 1923 179 137 103 chr4 159599 159788 -202168559 + L1MA10 LINE L1 5918 6099 -235 2335 101 0 0 chr4 159788 160086 -202168261 - AluSg SINE Alu -12 298 1 1923 179 137 103 chr4 160086 160241 -202168106 + L1MA10 LINE L1 6099 6304 -30 359 243 52 62 chr4 160272 160376 -202167971 + MER6B DNA MER2_type 1 104 -761 9620 23 2 245 chr4 160376 162191 -202166156 - SVA Other Other -1 1385 13 359 243 52 62 chr4 162191 162215 -202166132 + MER6B DNA MER2_type 104 127 -738 1693 102 0 5 chr4 162215 162431 -202165916 - AluSg SINE Alu -95 215 1 359 243 52 62 chr4 162431 162511 -202165836 + MER6B DNA MER2_type 127 208 -2 1202 144 5 0 chr4 162723 162911 -202165436 - MER30B DNA MER1_type -1 189 1 3685 126 14 14 chr4 163813 164384 -202163963 - LTR10C LTR ERV1 -20 571 1 3579 58 74 0 chr4 166879 167326 -202161021 - LTR2B LTR ERV1 0 490 11 2317 123 60 13 chr4 167434 167865 -202160482 - LTR56 LTR ERV1 -5 433 9 2124 106 0 26 chr4 168186 168489 -202159858 - AluY SINE Alu -16 295 1 1392 229 50 48 chr4 168644 169291 -202159056 - MER67C LTR ERV1 -5 705 1 307 290 99 34 chr4 170057 170319 -202158028 - MER21B LTR ERV1 -169 694 416 390 266 8 16 chr4 170351 170475 -202157872 + MER93a LTR ERV1 244 366 -36 23 0 0 0 chr4 171317 171340 -202157007 + AT_rich Low_complexity Low_complexity 1 23 0 860 247 62 43 chr4 171413 171531 -202156816 - MER33 DNA MER1_type -2275 310 196 1966 132 16 3 chr4 171531 171834 -202156513 + AluSc SINE Alu 1 307 -2 860 247 62 43 chr4 171834 172019 -202156328 - MER33 DNA MER1_type -2389 196 1 728 205 49 33 chr4 172222 172427 -202155920 - MER61D LTR ERV1 -18 732 338 3524 131 38 2 chr4 173086 173661 -202154686 - MER51C LTR ERV1 0 640 3 1053 289 131 7 chr4 173845 174264 -202154083 - MLT1H LTR MaLR -72 477 7 2475 63 7 3 chr4 174914 175213 -202153134 + AluY SINE Alu 1 300 -11 576 262 39 78 chr4 175236 175455 -202152892 - MER52-int LTR ERV1 -1818 5273 5047 1321 384 7 16 chr4 175455 175762 -202152585 + AluSx SINE Alu 5 308 -4 576 262 39 78 chr4 175762 175869 -202152478 - MER52-int LTR ERV1 -2044 5047 3967 280 250 91 0 chr4 176402 176490 -202151857 + MIR SINE MIR 92 187 -75 2151 110 7 27 chr4 176490 176790 -202151557 - AluSq SINE Alu -19 294 1 1010 208 76 25 chr4 176924 177373 -202150974 + L1MA8 LINE L1 5748 6287 -4 2164 120 3 0 chr4 177489 177790 -202150557 + AluSg SINE Alu 1 302 -8 2358 111 0 0 chr4 178020 178327 -202150020 + AluSg SINE Alu 1 307 -3 791 204 101 86 chr4 178893 179058 -202149289 - MER92B LTR ERV1 0 636 475 2181 90 3 7 chr4 179058 179347 -202149000 + AluSc SINE Alu 1 288 -21 791 204 101 86 chr4 179347 179519 -202148828 - MER92B LTR ERV1 -161 475 294 300 274 32 21 chr4 179553 179648 -202148699 - MER92B LTR ERV1 -508 128 33 917 251 118 30 chr4 179662 180025 -202148322 + MER21B LTR ERV1 400 794 -69 1684 185 0 7 chr4 180044 180341 -202148006 + AluJb SINE Alu 1 295 -17 1843 145 7 14 chr4 180402 180718 -202147629 - AluSx SINE Alu 0 314 1 442 231 30 8 chr4 181354 181488 -202146859 + MER67C LTR ERV1 1 137 -573 1019 262 80 34 chr4 181491 182123 -202146224 - L1 LINE L1 -2963 3071 2469 2023 119 6 50 chr4 182123 182463 -202145884 - AluSx SINE Alu 0 312 1 1019 262 80 34 chr4 182463 182657 -202145690 - L1 LINE L1 -3565 2469 2285 858 277 64 56 chr4 182657 182908 -202145439 - MSTD LTR MaLR 0 396 148 2129 111 7 3 chr4 182908 183206 -202145141 + AluSg SINE Alu 1 299 -11 858 277 64 56 chr4 183206 183271 -202145076 - MSTD LTR MaLR -248 148 85 1750 117 47 33 chr4 183271 183570 -202144777 - AluSc SINE Alu -6 303 1 858 277 64 56 chr4 183570 183645 -202144702 - MSTD LTR MaLR -311 85 1 1019 262 80 34 chr4 183645 183916 -202144431 - L1 LINE L1 -3749 2285 1787 1401 216 20 24 chr4 183919 184211 -202144136 - AluJb SINE Alu -21 291 1 691 130 0 0 chr4 184297 184397 -202143950 + AluSg/x SINE Alu 202 301 -9 2336 283 73 50 chr4 184397 184654 -202143693 - L1 LINE L1 -4519 1446 1196 2010 103 16 53 chr4 184654 184975 -202143372 - AluSc SINE Alu 0 309 1 2336 283 73 50 chr4 184975 185137 -202143210 - L1 LINE L1 -4769 1196 1039 2264 118 7 0 chr4 185137 185442 -202142905 - AluSq SINE Alu -6 307 1 2336 283 73 50 chr4 185442 185521 -202142826 - L1 LINE L1 -4926 1039 963 2161 117 7 7 chr4 185521 185828 -202142519 - AluSc SINE Alu 0 309 3 2336 283 73 50 chr4 185828 186600 -202141747 - L1 LINE L1 -5002 963 344 333 314 29 0 chr4 186680 186782 -202141565 - L1M3a LINE L1 -5211 744 640 903 328 88 24 chr4 186790 187208 -202141139 - L1M3a LINE L1 -5501 454 10 22 0 0 0 chr4 187757 187779 -202140568 + AT_rich Low_complexity Low_complexity 1 22 0 669 256 146 6 chr4 188026 188347 -202140000 - L1MB3 LINE L1 -4 6179 5814 * 15733 55 6 8 chr4 188343 190432 -202137915 - L1PA5 LINE L1 -1 6153 4072 2130 102 0 7 chr4 190432 190727 -202137620 + AluY SINE Alu 3 295 -16 15733 55 6 8 chr4 190727 191556 -202136791 - L1PA5 LINE L1 -2082 4072 3243 4481 180 36 2 chr4 191564 192424 -202135923 - L1P LINE L1 -5247 899 11 2849 224 47 18 chr4 192430 193261 -202135086 - L1MB3 LINE L1 -810 5336 4476 1985 146 17 0 chr4 193261 193556 -202134791 - AluSg SINE Alu -9 301 2 2849 224 47 18 chr4 193556 193625 -202134722 - L1MB3 LINE L1 -1670 4476 4410 1801 158 27 10 chr4 193626 193923 -202134424 - AluSx SINE Alu -10 302 1 622 247 16 21 chr4 193931 194117 -202134230 + L1 LINE L1 3907 4091 -2055 21 0 0 0 chr4 194117 194138 -202134209 + AT_rich Low_complexity Low_complexity 1 21 0 2094 109 39 0 chr4 194475 194759 -202133588 - AluSg SINE Alu -15 295 1 478 118 0 13 chr4 194796 194872 -202133475 - L1PA7 LINE L1 -7 6147 6073 496 303 37 72 chr4 194878 195200 -202133147 - L1MB2 LINE L1 -53 6354 6051 2024 135 0 17 chr4 195200 195497 -202132850 - AluSx SINE Alu -20 292 1 496 303 37 72 chr4 195497 195633 -202132714 - L1MB2 LINE L1 -356 6051 5912 508 283 72 31 chr4 195637 195927 -202132420 - L1MB2 LINE L1 -1296 5086 4785 423 298 27 30 chr4 195931 196114 -202132233 - L1MB2 LINE L1 -3505 2877 2694 246 32 0 0 chr4 196114 196145 -202132202 + (CA)n Simple_repeat Simple_repeat 2 32 0 423 298 27 30 chr4 196145 196256 -202132091 - L1MB2 LINE L1 -3688 2694 2584 287 256 110 51 chr4 196375 196693 -202131654 - L1MB2 LINE L1 -3890 2494 2196 252 0 0 0 chr4 196693 196721 -202131626 + (TA)n Simple_repeat Simple_repeat 2 29 0 2340 97 0 3 chr4 196721 197020 -202131327 - AluSc SINE Alu -11 298 1 287 256 110 51 chr4 197020 197129 -202131218 - L1MB2 LINE L1 -4187 2197 2041 679 300 64 18 chr4 197218 197690 -202130657 - L1MB2 LINE L1 -4452 1930 1355 2265 94 0 10 chr4 197690 197987 -202130360 - AluY SINE Alu -17 294 1 679 300 64 18 chr4 197987 198030 -202130317 - L1MB2 LINE L1 -5027 1355 1315 43 35 0 0 chr4 198048 198105 -202130242 + AT_rich Low_complexity Low_complexity 1 57 0 2183 107 0 3 chr4 198191 198480 -202129867 - AluSc SINE Alu -16 293 6 2035 109 0 4 chr4 198517 198792 -202129555 - AluY SINE Alu -34 277 4 283 354 20 44 chr4 199238 199535 -202128812 - L1MB2 LINE L1 -5596 707 418 21 0 0 0 chr4 202998 203019 -202125328 + AT_rich Low_complexity Low_complexity 1 21 0 848 149 90 11 chr4 203275 203463 -202124884 - L1MA3 LINE L1 -5 6300 6098 2078 131 3 3 chr4 204839 205144 -202123203 + AluSc SINE Alu 1 305 -4 246 239 0 16 chr4 207162 207292 -202121055 + (CA)n Simple_repeat Simple_repeat 1 127 0 374 304 82 78 chr4 207831 208305 -202120042 - L1M2 LINE L1 -5522 1327 852 544 230 122 48 chr4 208474 208704 -202119643 + MIR SINE MIR 14 260 -2 2040 76 10 7 chr4 209278 209581 -202118766 - LTR6B LTR ERV1 -254 304 1 426 121 0 0 chr4 209581 209639 -202118708 - AluS SINE Alu -248 61 4 1139 239 48 5 chr4 209643 210167 -202118180 + MER67C LTR ERV1 101 706 -4 1486 153 0 14 chr4 210543 210825 -202117522 - L1PA5 LINE L1 -7 6147 5870 1928 109 39 0 chr4 211297 211582 -202116765 + AluY SINE Alu 1 296 -15 845 202 43 11 chr4 211582 211770 -202116577 - MSTA LTR MaLR -66 362 169 2329 75 0 33 chr4 211770 212076 -202116271 + AluY SINE Alu 1 296 -15 1407 143 14 0 chr4 212528 212751 -202115596 - AluSg/x SINE Alu -18 294 69 331 272 33 0 chr4 212867 212959 -202115388 - AluS SINE Alu -208 95 1 2326 231 57 52 chr4 212959 213891 -202114456 + L1M2 LINE L1 4308 5247 -899 2082 95 4 0 chr4 213891 214153 -202114194 + AluSp SINE Alu 38 300 -13 2326 231 57 52 chr4 214153 214274 -202114073 + L1M2 LINE L1 5247 5366 -780 225 242 16 0 chr4 214277 214339 -202114008 + L1M2 LINE L1 5518 5580 -720 1010 87 0 0 chr4 214343 214470 -202113877 + AluY SINE Alu 1 127 -184 598 317 74 43 chr4 214648 215137 -202113210 - L1M3a LINE L1 -5106 849 346 244 325 12 25 chr4 215133 215296 -202113051 - L1M3a LINE L1 -5251 704 544 * 280 272 19 29 chr4 215324 215427 -202112920 - L1M3a LINE L1 -5729 226 125 * 724 273 33 4 chr4 215425 215696 -202112651 - L1MB2 LINE L1 -180 5991 5713 844 157 35 12 chr4 215696 215868 -202112479 + MSTA LTR MaLR 1 176 -252 801 219 109 21 chr4 216446 216684 -202111663 + MSTA LTR MaLR 170 428 0 761 107 0 0 chr4 216736 216839 -202111508 - AluY SINE Alu -208 103 1 1252 270 75 12 chr4 216905 217820 -202110527 + L1M3 LINE L1 4685 5655 -513 906 78 0 9 chr4 217843 217959 -202110388 + Alu SINE Alu 175 289 -21 257 245 43 0 chr4 217969 218063 -202110284 - L1 LINE L1 -1517 4517 4420 2076 122 7 0 chr4 218096 218391 -202109956 + AluSx SINE Alu 1 297 -15 2133 94 7 0 chr4 218450 218738 -202109609 - AluY SINE Alu -21 290 1 673 115 33 8 chr4 218793 218915 -202109432 + L1PA13 LINE L1 6035 6159 -4 644 286 68 4 chr4 218942 219253 -202109094 - L1MB2 LINE L1 -148 6259 5911 375 305 71 13 chr4 219255 219481 -202108866 - L1MB2 LINE L1 -1295 5087 4849 1205 159 5 24 chr4 219649 219857 -202108490 + AluJb SINE Alu 84 287 -25 269 258 47 39 chr4 220549 220677 -202107670 + MER67C LTR ERV1 8 136 -574 2255 101 3 3 chr4 221073 221369 -202106978 - AluSc SINE Alu -13 296 1 707 302 38 18 chr4 221567 222039 -202106308 - L1MB2 LINE L1 -4452 1930 1373 2243 92 0 10 chr4 222039 222332 -202106015 - AluY SINE Alu -17 294 5 1568 248 75 51 chr4 222359 222717 -202105630 - L1 LINE L1 -2993 3041 2693 2277 84 3 7 chr4 222717 223016 -202105331 + AluY SINE Alu 1 298 -13 1568 248 75 51 chr4 223016 223601 -202104746 - L1 LINE L1 -3341 2693 2075 482 280 84 2 chr4 223608 223928 -202104419 - MSTD LTR MaLR 0 396 1 233 245 32 0 chr4 223957 224051 -202104296 - L1 LINE L1 -3991 2044 1948 1434 228 0 24 chr4 224215 224513 -202103834 - AluJb SINE Alu -21 291 1 454 162 0 0 chr4 224565 224639 -202103708 - AluJo SINE Alu -178 134 61 2187 285 51 28 chr4 224793 225962 -202102385 - L1 LINE L1 -4732 1233 302 729 312 70 23 chr4 225964 226307 -202102040 - L1 LINE L1 -5501 454 96 1771 99 70 46 chr4 226334 226618 -202101729 - AluSq SINE Alu -22 291 1 488 267 30 86 chr4 227226 227470 -202100877 - L1MB2 LINE L1 -32 6139 5914 2397 66 0 27 chr4 227470 227771 -202100576 - AluY SINE Alu -18 293 1 488 267 30 86 chr4 227771 227829 -202100518 - L1MB2 LINE L1 -257 5914 5854 1265 52 204 5 chr4 227843 228054 -202100293 - LTR66 LTR ERVL 0 610 358 195 333 176 36 chr4 229033 229198 -202099149 + MER5A DNA MER1_type 2 189 0 193 340 103 19 chr4 229206 229362 -202098985 - MER5B DNA MER1_type -1 177 9 2239 93 0 30 chr4 229638 229939 -202098408 + AluY SINE Alu 1 292 -19 2010 155 0 7 chr4 230892 231196 -202097151 - AluSx SINE Alu -10 302 1 1009 176 11 0 chr4 231663 231850 -202096497 + MER30B DNA MER1_type 1 189 -1 2400 81 7 0 chr4 231981 232289 -202096058 + AluSx SINE Alu 1 310 -2 374 216 119 46 chr4 232384 232463 -202095884 - MER6B DNA MER2_type -657 208 136 1531 112 9 5 chr4 232463 232677 -202095670 + AluSg SINE Alu 1 215 -95 374 216 119 46 chr4 232677 232791 -202095556 - MER6B DNA MER2_type -729 136 1 2355 196 111 42 chr4 232822 233541 -202094806 - L1MA9 LINE L1 -26 6174 5406 3060 229 55 38 chr4 233551 234529 -202093818 - L1MA9 LINE L1 -816 5218 4215 705 211 0 0 chr4 234529 234662 -202093685 + FLAM_C SINE Alu 1 133 0 3060 229 55 38 chr4 234662 234889 -202093458 - L1MA9 LINE L1 -1819 4215 3993 984 303 52 65 chr4 234951 235686 -202092661 - L1MA9 LINE L1 -5106 849 125 * 1742 271 69 24 chr4 235684 235951 -202092396 - L1MB2 LINE L1 -180 5991 5737 2070 189 36 12 chr4 235951 236369 -202091978 + MSTA LTR MaLR 1 428 0 1742 271 69 24 chr4 236369 236453 -202091894 - L1MB2 LINE L1 -434 5737 5658 2302 111 0 0 chr4 236453 236751 -202091596 + AluSx SINE Alu 1 298 -14 1742 271 69 24 chr4 236751 237803 -202090544 - L1MB2 LINE L1 -513 5658 4532 242 245 20 0 chr4 237832 237934 -202090413 - L1MB2 LINE L1 -3280 2866 2763 * 598 133 0 70 chr4 237933 238061 -202090286 + L1PA13 LINE L1 6035 6153 -10 671 214 24 12 chr4 238087 238255 -202090092 - L1MB2 LINE L1 -153 6018 5849 2261 96 10 3 chr4 238258 238561 -202089786 + AluSx SINE Alu 1 305 -7 238 204 0 0 chr4 238564 238613 -202089734 - L1MB2 LINE L1 -427 5741 5693 327 321 36 7 chr4 238636 238776 -202089571 - L1 LINE L1 -1291 4855 4712 25 0 0 0 chr4 239512 239537 -202088810 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr4 239690 239719 -202088628 + AT_rich Low_complexity Low_complexity 1 29 0 4813 186 58 16 chr4 239719 240208 -202088139 - L1MA3 LINE L1 0 6193 5726 2085 111 0 23 chr4 240208 240344 -202088003 + AluSx SINE Alu 1 139 -173 2404 61 3 0 chr4 240344 240640 -202087707 + AluY SINE Alu 1 297 -14 2085 111 0 23 chr4 240640 240809 -202087538 + AluSx SINE Alu 139 299 -13 4813 186 58 16 chr4 240809 242236 -202086111 - L1MA3 LINE L1 -467 5726 4170 2193 101 0 20 chr4 242236 242532 -202085815 - AluSx SINE Alu -22 290 1 4813 186 58 16 chr4 242532 242739 -202085608 - L1MA3 LINE L1 -2023 4170 3973 2355 90 3 7 chr4 243073 243383 -202084964 - AluSc SINE Alu 0 309 1 198 0 0 0 chr4 243583 243605 -202084742 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 1174 223 151 20 chr4 244747 245249 -202083098 - MER92B LTR ERV1 -10 626 59 788 253 93 27 chr4 245290 245622 -202082725 + MER21B LTR ERV1 403 756 -107 1530 197 0 21 chr4 245673 245962 -202082385 + AluJb SINE Alu 7 289 -23 185 0 40 0 chr4 246028 246053 -202082294 + (TTG)n Simple_repeat Simple_repeat 2 27 0 1384 245 90 23 chr4 246820 247511 -202080836 - L1MA3 LINE L1 -2963 3071 2335 575 295 27 0 chr4 248035 248218 -202080129 - MSTD LTR MaLR -208 188 1 235 250 87 34 chr4 248219 248483 -202079864 - L1M4c LINE L1 -3965 2419 2142 1607 170 33 14 chr4 248512 248788 -202079559 - AluJb SINE Alu -31 281 1 387 203 0 0 chr4 248839 248913 -202079434 - AluJo SINE Alu -168 134 61 713 266 45 51 chr4 248982 249490 -202078857 - L1M4c LINE L1 -4348 2034 1472 1182 122 0 10 chr4 249539 249735 -202078612 - L1MA2 LINE L1 0 6304 6111 2028 287 63 22 chr4 249757 251001 -202077346 - L1MA3 LINE L1 -4501 1534 344 391 334 40 0 chr4 251012 251268 -202077079 - L1M4c LINE L1 -5224 1079 898 724 308 69 27 chr4 251338 251673 -202076674 - L1MA3 LINE L1 -5606 349 1 1878 131 14 3 chr4 252049 252352 -202075995 + AluSp SINE Alu 1 306 0 2332 81 0 16 chr4 252526 252835 -202075512 + AluY SINE Alu 1 304 -7 4103 200 17 52 chr4 253027 254027 -202074320 + LTR5 LTR ERVK 5 969 0 1002 145 65 11 chr4 254027 254213 -202074134 + HERVK LTR ERVK 1 196 -7047 14317 176 17 10 chr4 254234 257036 -202071311 + HERVK LTR ERVK 893 3714 -3529 630 85 0 11 chr4 257037 257131 -202071216 - Alu SINE Alu 0 311 219 1550 136 16 0 chr4 257131 257388 -202070959 + HERVK LTR ERVK 3697 3957 -3286 2376 72 0 3 chr4 257510 257803 -202070544 + AluY SINE Alu 1 292 -19 500 245 141 12 chr4 257845 258008 -202070339 + MIR SINE MIR 4 187 -75 2214 108 0 0 chr4 258410 258705 -202069642 + AluY SINE Alu 1 295 -16 899 139 36 0 chr4 260052 260217 -202068130 + L1MA3 LINE L1 6127 6297 -8 2324 108 0 0 chr4 261101 261408 -202066939 - AluSp SINE Alu -6 307 1 2429 82 3 3 chr4 265422 265726 -202062621 - AluY SINE Alu -7 304 1 622 287 56 31 chr4 266117 266613 -202061734 + L1M4c LINE L1 1288 1945 -4618 2126 142 0 0 chr4 266819 267121 -202061226 - AluSg SINE Alu -8 302 1 2100 119 20 0 chr4 267126 267428 -202060919 - AluSc SINE Alu -1 308 1 907 294 29 26 chr4 268066 268518 -202059829 - L1MB2 LINE L1 -70 6337 5885 248 268 0 24 chr4 268561 268643 -202059704 - L1MB2 LINE L1 -1022 5360 5281 * 292 187 8 12 chr4 268641 268723 -202059624 - L1MA6 LINE L1 -359 5941 5857 926 203 48 0 chr4 268840 269067 -202059280 - L1MA6 LINE L1 -725 5575 5338 1529 90 75 0 chr4 269070 269282 -202059065 + AluSq SINE Alu 3 230 -83 5438 141 30 47 chr4 269282 270371 -202057976 - MER11C LTR ERVK 0 1071 1 482 151 12 0 chr4 270371 270457 -202057890 + AluSq SINE Alu 225 311 -2 2756 226 65 16 chr4 270457 271362 -202056985 - L1MA6 LINE L1 -801 5345 4396 697 246 11 16 chr4 271366 271549 -202056798 + L1 LINE L1 3910 4091 -2055 2117 136 3 0 chr4 271608 271909 -202056438 + AluSx SINE Alu 6 307 -5 962 296 49 2 chr4 272193 272663 -202055684 - L1MB2 LINE L1 -5 6166 5675 515 286 61 10 chr4 272665 272962 -202055385 - L1MB2 LINE L1 -1295 5087 4776 385 246 97 66 chr4 272990 273318 -202055029 - L1MB2 LINE L1 -3272 3110 2794 2297 103 0 0 chr4 273318 273619 -202054728 + AluY SINE Alu 1 301 -10 385 246 97 66 chr4 273619 273692 -202054655 - L1MB2 LINE L1 -3588 2794 2725 207 0 0 0 chr4 273692 273715 -202054632 + (CA)n Simple_repeat Simple_repeat 2 24 0 385 246 97 66 chr4 273715 274242 -202054105 - L1MB2 LINE L1 -3657 2725 2156 626 313 91 11 chr4 274426 274927 -202053420 - L1MB2 LINE L1 -4456 1926 1315 521 315 95 20 chr4 274942 275288 -202053059 - L1MB2 LINE L1 -4866 1447 1076 1053 216 59 37 chr4 276903 277278 -202051069 - SVA Other Other -540 846 464 824 216 78 25 chr4 278387 278806 -202049541 - L1MA8 LINE L1 -5 6286 5773 2146 128 7 0 chr4 278908 279198 -202049149 - AluSg SINE Alu -18 292 1 498 295 135 5 chr4 279205 279398 -202048949 - MIR SINE MIR -14 248 31 7461 66 28 2 chr4 279525 280507 -202047840 + LTR13 LTR ERVK 1 1007 0 425 289 54 31 chr4 280864 281124 -202047223 + LTR60-int LTR ERV1 3959 4864 -2305 653 304 57 59 chr4 281494 282074 -202046273 + LTR60-int LTR ERV1 5343 6216 -1887 209 59 59 0 chr4 282775 282809 -202045538 + T-rich Low_complexity Low_complexity 2 37 0 263 156 0 0 chr4 282953 282998 -202045349 - Alu SINE Alu -256 45 1 517 358 47 22 chr4 284359 284809 -202043538 + LTR60-int LTR ERV1 6464 6924 -281 1971 214 58 46 chr4 285030 285578 -202042769 + LTR60 LTR ERV1 2 556 -30 242 227 30 76 chr4 285466 285598 -202042749 + TAR1 Satellite telomeric 60 185 -1926 * 1929 135 11 0 chr4 286519 286801 -202041546 + AluSc SINE Alu 1 285 -24 380 298 3 12 chr4 286869 287107 -202041240 + T-rich Low_complexity Low_complexity 1 235 0 2665 222 113 13 chr4 287246 287520 -202040827 - L1 LINE L1 -795 5351 5106 2357 93 0 0 chr4 287520 287820 -202040527 - AluSg SINE Alu -10 300 1 2665 222 113 13 chr4 287820 288401 -202039946 - L1 LINE L1 -1040 5106 4410 735 200 41 18 chr4 288433 288603 -202039744 + L1 LINE L1 3918 4091 -2055 420 70 0 99 chr4 288670 288741 -202039606 + Alu SINE Alu 1 64 -254 2356 78 0 0 chr4 288950 289267 -202039080 - AluY SINE Alu 0 317 1 345 360 56 27 chr4 289505 289900 -202038447 + HERV30 LTR ERV1 4698 5862 -2011 620 327 40 32 chr4 291965 292341 -202036006 + HERV30 LTR ERV1 6546 6924 -281 1909 224 63 35 chr4 292549 293090 -202035257 + LTR60 LTR ERV1 1 556 -30 357 248 67 0 chr4 293186 293291 -202035056 - L1MB2 LINE L1 -167 6004 5893 289 156 16 0 chr4 293783 293847 -202034500 + L1MA2 LINE L1 6121 6185 -119 1231 117 0 126 chr4 293847 293891 -202034456 + AluSp SINE Alu 100 148 -165 2276 61 7 4 chr4 293891 294169 -202034178 + AluY SINE Alu 2 280 -31 1231 117 0 126 chr4 294169 294354 -202033993 + AluSp SINE Alu 148 300 -13 539 141 52 37 chr4 294354 294489 -202033858 + L1MA3 LINE L1 6169 6305 0 373 195 0 3 chr4 294711 294785 -202033562 + AluS SINE Alu 1 65 -238 2824 215 76 15 chr4 294887 295934 -202032413 - L1MB2 LINE L1 -743 5403 4396 728 251 11 16 chr4 295935 296122 -202032225 + L1 LINE L1 3907 4092 -2054 525 305 106 13 chr4 296447 296909 -202031438 - L1MB2 LINE L1 -1 6406 5902 732 286 74 14 chr4 296933 297608 -202030739 - L1MB2 LINE L1 -1332 5050 2709 525 220 118 52 chr4 297863 298268 -202030079 - L1MB2 LINE L1 -3897 2487 2056 777 280 46 41 chr4 298446 298899 -202029448 - L1M4c LINE L1 -4633 1751 1317 324 336 51 43 chr4 299532 299788 -202028559 - L1M4c LINE L1 -5628 675 418 2219 22 7 11 chr4 302048 302323 -202026024 - AluYa5 SINE Alu -1 310 37 2238 103 0 0 chr4 302633 302933 -202025414 - AluY SINE Alu -10 301 2 578 208 9 123 chr4 353507 353719 -201974628 - AluJb SINE Alu -115 197 10 652 265 69 26 chr4 353728 354075 -201974272 + L1 LINE L1 4308 4669 -1477 2135 61 18 4 chr4 354088 354395 -201973952 + AluY SINE Alu 1 311 0 1033 198 52 71 chr4 354413 354737 -201973610 + L1MA9 LINE L1 5969 6286 -26 369 236 133 15 chr4 354764 354945 -201973402 + MER6 DNA MER2_type -65 861 -4 200 216 0 0 chr4 355094 355131 -201973216 - MIR SINE MIR -17 245 209 576 134 0 0 chr4 355184 355266 -201973081 - MER30B DNA MER1_type 0 190 109 2086 93 10 10 chr4 355267 355569 -201972778 + AluSc SINE Alu 1 302 -7 1623 216 74 13 chr4 355572 356159 -201972188 - MER67C LTR ERV1 -31 679 1 350 295 79 44 chr4 356843 357204 -201971143 - MER21B LTR ERV1 -75 856 416 346 276 48 28 chr4 357236 357381 -201970966 + MER93a LTR ERV1 244 391 -11 1947 106 34 0 chr4 358082 358374 -201969973 - AluSq SINE Alu -11 302 1 216 254 0 0 chr4 358476 358535 -201969812 + (CACG)n Simple_repeat Simple_repeat 1 59 0 431 218 92 0 chr4 358652 358794 -201969553 - MER33 DNA MER1_type -14 349 195 229 269 0 0 chr4 358795 358847 -201969500 + LTR30 LTR ERV1 1 52 -670 808 136 8 15 chr4 358847 358979 -201969368 + LTR12 LTR ERV1 53 183 -531 279 253 30 20 chr4 359103 359202 -201969145 + LTR30 LTR ERV1 544 643 -79 678 122 20 0 chr4 359204 359302 -201969045 + LTR12 LTR ERV1 615 714 0 2374 72 0 3 chr4 359324 359629 -201968718 + AluY SINE Alu 2 305 -6 451 287 26 0 chr4 359648 359763 -201968584 - MER33 DNA MER1_type -206 118 1 693 191 52 111 chr4 359967 360127 -201968220 - MER61D LTR ERV1 -17 732 564 2048 96 7 13 chr4 360127 360428 -201967919 - AluSq SINE Alu -3 310 12 693 191 52 111 chr4 360428 360474 -201967873 - MER61D LTR ERV1 -185 564 340 3807 132 20 0 chr4 361149 361737 -201966610 - MER51C LTR ERV1 0 640 1 1219 275 123 24 chr4 361873 362335 -201966012 - MLT1H LTR MaLR 0 549 34 2006 123 3 3 chr4 362335 362636 -201965711 - AluSq SINE Alu -12 301 1 1219 275 123 24 chr4 362636 362667 -201965680 - MLT1H LTR MaLR -515 34 7 4869 194 23 6 chr4 362754 364189 -201964158 + L1PA16 LINE L1 4705 6162 -4 302 255 114 46 chr4 365698 365838 -201962509 + L1ME1 LINE L1 1087 1216 -5180 195 42 0 0 chr4 365838 365862 -201962485 + (TA)n Simple_repeat Simple_repeat 2 25 0 302 255 114 46 chr4 365862 365984 -201962363 + L1ME1 LINE L1 1216 1367 -5029 1455 232 81 45 chr4 366040 366310 -201962037 + L1ME1 LINE L1 2946 3205 -3010 279 0 0 0 chr4 366310 366341 -201962006 + (CA)n Simple_repeat Simple_repeat 2 32 0 1455 232 81 45 chr4 366341 366711 -201961636 + L1ME1 LINE L1 3205 3609 -2606 2702 216 77 64 chr4 366721 366988 -201961359 + L1ME1 LINE L1 5108 5370 -865 3412 148 60 5 chr4 366988 367590 -201960757 - MER41B LTR ERV1 0 635 1 2702 216 77 64 chr4 367590 368389 -201959958 + L1ME1 LINE L1 5370 6185 -50 629 189 9 0 chr4 368389 368500 -201959847 - FRAM SINE Alu -19 157 46 339 149 0 1 chr4 368518 368657 -201959690 + Alu SINE Alu 244 372 0 1674 153 13 13 chr4 368853 369153 -201959194 - AluSx SINE Alu -12 300 1 243 319 14 0 chr4 369466 369535 -201958812 - L2 LINE L2 -82 3190 3121 1623 203 56 43 chr4 369568 370011 -201958336 + LTR2 LTR ERV1 1 449 0 1522 147 25 81 chr4 370913 371282 -201957065 - MER4A LTR ERV1 -2 662 256 464 133 44 11 chr4 371277 371367 -201956980 - MER4A LTR ERV1 -566 98 6 * 266 241 169 96 chr4 371563 371812 -201956535 + L2 LINE L2 2630 2896 -418 202 188 31 115 chr4 372261 372357 -201955990 - MIR SINE MIR -82 126 39 802 235 270 27 chr4 372918 373659 -201954688 - L2 LINE L2 -5 3308 2364 216 246 18 0 chr4 373721 373778 -201954569 + L2 LINE L2 2921 2978 -294 279 246 114 18 chr4 374003 374117 -201954230 + MIR SINE MIR 18 142 -66 21 0 0 0 chr4 374634 374655 -201953692 + GC_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr4 374939 374961 -201953386 + GC_rich Low_complexity Low_complexity 1 22 0 40 59 0 0 chr4 377924 377992 -201950355 + AT_rich Low_complexity Low_complexity 1 68 0 390 268 117 0 chr4 378195 378320 -201950027 - MIR SINE MIR -63 145 24 522 243 185 14 chr4 378347 378569 -201949778 + MIR SINE MIR 2 261 -1 249 275 29 0 chr4 379458 379527 -201948820 + (TCCA)n Simple_repeat Simple_repeat 3 73 0 322 200 156 22 chr4 379984 380074 -201948273 + MIR SINE MIR 44 145 -63 2704 275 20 12 chr4 380295 381045 -201947302 + L1PA12 LINE L1 524 1279 -6302 1705 141 121 0 chr4 381045 381358 -201946989 - MER61C LTR ERV1 0 434 84 10541 125 22 22 chr4 381381 382835 -201945512 - MER61C-int LTR ERV1 -9 5208 3755 2029 83 0 4 chr4 382835 383089 -201945258 + AluY SINE Alu 41 293 -18 10541 125 22 22 chr4 383089 383129 -201945218 - MER61C-int LTR ERV1 -1462 3755 3716 2146 112 0 27 chr4 383129 383424 -201944923 + AluSg SINE Alu 1 287 -23 10541 125 22 22 chr4 383424 385062 -201943285 - MER61C-int LTR ERV1 -1501 3716 1971 1194 170 48 15 chr4 385040 385311 -201943036 - MER61C-int LTR ERV1 -3577 1640 1361 * 4143 142 81 62 chr4 385306 385438 -201942909 - MER61C-int LTR ERV1 -4004 1213 1085 2163 122 0 0 chr4 385438 385732 -201942615 + AluSc SINE Alu 1 294 -15 270 81 0 0 chr4 385732 385769 -201942578 + (TG)n Simple_repeat Simple_repeat 2 38 0 4143 142 81 62 chr4 385769 385983 -201942364 - MER61C-int LTR ERV1 -4132 1085 877 2023 130 20 0 chr4 385983 386275 -201942072 - AluSg SINE Alu -12 298 1 4143 142 81 62 chr4 386275 387091 -201941256 - MER61C-int LTR ERV1 -4340 877 4 1027 151 53 7 chr4 387099 387208 -201941139 - MER61C LTR ERV1 -6 419 317 204 40 0 0 chr4 387208 387233 -201941114 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 1027 151 53 7 chr4 387233 387422 -201940925 - MER61C LTR ERV1 -108 317 84 248 172 0 52 chr4 387437 387495 -201940852 + L1PA12 LINE L1 736 790 -6791 * 1257 196 39 15 chr4 387476 387780 -201940567 + L1PA12 LINE L1 1358 2460 -5124 1474 182 56 25 chr4 388112 388470 -201939877 + THE1C LTR MaLR 1 369 -6 8897 145 62 3 chr4 388475 389967 -201938380 + THE1C-int LTR MaLR 1 1580 0 518 185 23 39 chr4 389967 390097 -201938250 + THE1C LTR MaLR 1 128 -247 1706 145 0 0 chr4 390097 390338 -201938009 - AluSg SINE Alu -69 241 1 394 159 0 0 chr4 390338 390407 -201937940 + MSTA LTR MaLR 360 428 0 239 218 0 64 chr4 390615 390693 -201937654 + T-rich Low_complexity Low_complexity 2 74 0 21 71 0 0 chr4 390766 390808 -201937539 + AT_rich Low_complexity Low_complexity 1 42 0 203 158 0 0 chr4 391090 391128 -201937219 + (CA)n Simple_repeat Simple_repeat 1 38 0 923 292 49 35 chr4 391148 391796 -201936551 + L1MB2 LINE L1 4539 5195 -951 1299 252 47 70 chr4 391883 392146 -201936201 + L1MB2 LINE L1 5341 5608 -563 1847 200 0 0 chr4 392146 392446 -201935901 + AluJb SINE Alu 12 311 -1 1299 252 47 70 chr4 392446 392796 -201935551 + L1MB2 LINE L1 5608 5940 -231 23 0 0 0 chr4 393795 393818 -201934529 + AT_rich Low_complexity Low_complexity 1 23 0 733 168 37 47 chr4 394341 394367 -201933980 + L1MA3 LINE L1 6118 6143 -162 2237 112 0 3 chr4 394367 394670 -201933677 + AluSg SINE Alu 1 302 -8 733 168 37 47 chr4 394670 394833 -201933514 + L1MA3 LINE L1 6143 6305 0 257 371 41 22 chr4 396743 397010 -201931337 + L1MB2 LINE L1 7 278 -5613 302 310 180 4 chr4 397385 397630 -201930717 + L1MB2 LINE L1 369 656 -5316 723 285 88 13 chr4 397630 398057 -201930290 + L1MB2 LINE L1 903 1513 -4638 348 313 125 6 chr4 398233 398409 -201929938 + L1MB2 LINE L1 1627 1823 -4149 464 274 78 32 chr4 398499 398718 -201929629 + L1MB2 LINE L1 1816 2044 -3928 2360 87 10 13 chr4 398734 399045 -201929302 - AluY SINE Alu -1 310 1 624 284 50 27 chr4 399228 399309 -201929038 + L1MB2 LINE L1 2204 2282 -3688 186 43 0 0 chr4 399309 399332 -201929015 + (TG)n Simple_repeat Simple_repeat 2 24 0 624 284 50 27 chr4 399332 399694 -201928653 + L1MB2 LINE L1 2282 2657 -3313 2349 107 3 3 chr4 399699 400009 -201928338 + AluSp SINE Alu 1 310 -3 463 289 63 14 chr4 400089 400373 -201927974 + L1MB2 LINE L1 4373 4670 -1300 918 278 72 11 chr4 400386 400828 -201927519 + L1MB2 LINE L1 5499 5967 -28 2690 43 3 6 chr4 401199 401548 -201926799 + L1PA8 LINE L1 5805 6152 -20 2026 83 72 10 chr4 401549 401916 -201926431 + LTR7 LTR ERV1 1 450 0 571 177 24 79 chr4 401936 402063 -201926284 - L1 LINE L1 -2085 4061 3943 2312 86 14 0 chr4 402063 402354 -201925993 + AluSp SINE Alu 1 295 -18 571 177 24 79 chr4 402354 402390 -201925957 - L1 LINE L1 -2203 3943 3907 1578 207 58 50 chr4 402405 402942 -201925405 + L1MB2 LINE L1 4400 4940 -1206 1084 266 62 23 chr4 402944 403390 -201924957 + L1MB2 LINE L1 5662 6130 -41 1890 118 93 0 chr4 403390 403670 -201924677 + AluSp SINE Alu 1 306 -7 1084 266 62 23 chr4 403670 403708 -201924639 + L1MB2 LINE L1 6130 6165 -6 2270 70 0 0 chr4 404075 404382 -201923965 + AluY SINE Alu 1 307 0 2342 267 76 30 chr4 404393 406002 -201922345 + L1MA3 LINE L1 357 1859 -4176 369 173 0 13 chr4 406074 406149 -201922198 + AluJo SINE Alu 61 134 -168 1594 211 0 14 chr4 406188 406473 -201921874 + AluJb SINE Alu 1 281 -31 258 213 0 0 chr4 406700 406761 -201921586 + L1MA3 LINE L1 1969 2029 -4006 933 283 92 17 chr4 406806 407163 -201921184 + MSTD LTR MaLR 1 384 -12 407 289 66 17 chr4 407173 407460 -201920887 + L1MA3 LINE L1 2071 2371 -3663 592 111 10 20 chr4 407460 407559 -201920788 + MER4A LTR ERV1 1 98 -566 1526 117 27 94 chr4 407608 407906 -201920441 + MER4A LTR ERV1 372 649 -15 392 235 138 18 chr4 407912 408129 -201920218 + L1MA3 LINE L1 2374 2616 -3418 1188 184 28 14 chr4 408138 408356 -201919991 - AluJb SINE Alu -91 221 1 733 264 69 39 chr4 408374 408740 -201919607 - MER21B LTR ERV1 -83 848 402 1063 246 110 25 chr4 408776 409278 -201919069 + MER92B LTR ERV1 46 402 -10 3309 217 64 5 chr4 410989 411747 -201916600 + L1MA3 LINE L1 3973 4793 -1241 1891 163 7 3 chr4 411747 412041 -201916306 + AluSx SINE Alu 1 295 -17 3309 217 64 5 chr4 412041 412172 -201916175 + L1MA3 LINE L1 4793 4915 -1119 287 104 0 21 chr4 412172 412220 -201916127 + LTR22B LTR ERVK 1 47 -445 1652 104 4 24 chr4 412230 412480 -201915867 + LTR22B LTR ERVK 248 492 0 5132 177 27 19 chr4 412483 413764 -201914583 + L1MA3 LINE L1 4913 6192 -1 26 0 0 0 chr4 413764 413790 -201914557 + AT_rich Low_complexity Low_complexity 1 26 0 263 350 45 29 chr4 413813 414056 -201914291 + L1MB2 LINE L1 35 281 -5610 1997 81 78 0 chr4 414223 414494 -201913853 + AluY SINE Alu 6 297 -14 443 305 85 20 chr4 414497 414697 -201913650 + L1MB2 LINE L1 4463 4675 -1295 899 270 38 15 chr4 414699 415040 -201913307 + L1MB2 LINE L1 5499 5847 -148 558 168 50 0 chr4 415075 415194 -201913153 - L1PA13 LINE L1 -2 6161 6037 1335 281 45 16 chr4 415334 415939 -201912408 + L1MB1 LINE L1 4535 5156 -990 1886 231 91 12 chr4 416030 416416 -201911931 + L1MB1 LINE L1 5283 5744 -424 2151 186 26 7 chr4 416416 416836 -201911511 - MSTA LTR MaLR 0 428 1 1886 231 91 12 chr4 416836 417106 -201911241 + L1MB1 LINE L1 5744 5991 -177 556 324 18 77 chr4 417104 417561 -201910786 + L1M3a LINE L1 125 554 -5401 * 306 226 0 0 chr4 417703 417765 -201910582 + MER6B DNA MER2_type 3 64 -212 572 181 0 0 chr4 417815 417909 -201910438 - AluS SINE Alu -217 96 3 477 228 58 92 chr4 417914 418029 -201910318 - L1 LINE L1 -1717 4317 4200 599 186 0 64 chr4 418029 418169 -201910178 + FLAM_C SINE Alu 1 131 -2 477 228 58 92 chr4 418169 418412 -201909935 - L1 LINE L1 -1834 4200 3971 328 291 0 18 chr4 418526 418636 -201909711 - L1 LINE L1 -5149 806 699 1418 102 0 11 chr4 418644 418830 -201909517 + AluSg/x SINE Alu 103 286 -24 23 0 0 0 chr4 418837 418860 -201909487 + AT_rich Low_complexity Low_complexity 1 23 0 2591 233 50 25 chr4 418897 419778 -201908569 + L1MA9 LINE L1 4464 5366 -780 1758 199 72 47 chr4 419784 420488 -201907859 + L1MA9 LINE L1 5521 6277 -35 420 230 110 31 chr4 420526 420717 -201907630 + MER6B DNA MER2_type 4 209 -1 1751 99 119 58 chr4 420947 421240 -201907107 + AluSx SINE Alu 1 311 -1 1106 123 0 64 chr4 421267 421470 -201906877 - MER30B DNA MER1_type 0 190 1 713 71 0 0 chr4 421673 421771 -201906576 + L1PA2 LINE L1 6057 6154 -1 181 174 92 184 chr4 423759 423868 -201904479 - MIR SINE MIR -9 253 155 195 244 0 0 chr4 424755 424796 -201903551 + L2 LINE L2 3191 3231 -82 2553 144 41 0 chr4 425525 425941 -201902406 - LTR56 LTR ERV1 -12 433 1 2064 211 145 21 chr4 426410 427037 -201901310 - MER67C LTR ERV1 -5 705 1 2311 67 3 24 chr4 427194 427492 -201900855 + AluY SINE Alu 1 292 -19 385 257 82 79 chr4 428028 428382 -201899965 - MER21A LTR ERV1 -75 856 502 315 298 8 16 chr4 428402 428526 -201899821 + MER93a LTR ERV1 244 366 -36 297 230 0 0 chr4 429343 429417 -201898930 + (CA)n Simple_repeat Simple_repeat 2 75 0 23 0 0 0 chr4 429533 429556 -201898791 + AT_rich Low_complexity Low_complexity 1 23 0 626 209 71 112 chr4 429559 429855 -201898492 - MER33 DNA MER1_type -40 284 1 739 205 32 30 chr4 430061 430269 -201898078 - MER61D LTR ERV1 -17 743 338 3504 129 51 5 chr4 430935 431508 -201896839 - MER51C LTR ERV1 0 640 2 940 175 30 0 chr4 431520 431686 -201896661 - MER67C LTR ERV1 -259 451 281 2548 63 0 3 chr4 431777 432080 -201896267 - AluY SINE Alu -9 302 1 43 112 0 0 chr4 433169 433366 -201894981 + AT_rich Low_complexity Low_complexity 1 197 0 291 242 0 61 chr4 433785 433884 -201894463 - MER67C LTR ERV1 -477 233 141 2223 113 0 0 chr4 434617 435082 -201893265 - AluSg SINE Alu 0 465 1 725 287 85 7 chr4 435140 435433 -201892914 - MER21B LTR ERV1 -125 738 423 2421 97 0 3 chr4 435869 436177 -201892170 - AluSq SINE Alu -6 307 1 1901 121 3 25 chr4 436477 436759 -201891588 + AluSq SINE Alu 28 303 -10 347 214 256 0 chr4 437465 437587 -201890760 + MIR SINE MIR 32 179 -57 2218 96 4 0 chr4 437796 438117 -201890230 + AluSp SINE Alu 3 324 0 456 283 65 27 chr4 438991 439175 -201889172 - MARNA DNA Mariner -196 390 200 29098 74 8 67 chr4 439594 440783 -201887564 + L1P LINE L1 11 1267 -4879 5550 153 20 17 chr4 440783 441733 -201886614 + LTR5 LTR ERVK 17 969 0 29098 74 8 67 chr4 441733 444876 -201883471 + L1P LINE L1 1267 4092 -2054 182 319 103 69 chr4 445139 445371 -201882976 + MIR SINE MIR 14 253 -9 6393 93 4 15 chr4 446448 446939 -201881408 + L1PA14 LINE L1 4872 5367 -794 2383 95 0 0 chr4 446939 447243 -201881104 + AluY SINE Alu 2 305 -6 6393 93 4 15 chr4 447243 448046 -201880301 + L1PA14 LINE L1 5367 6161 0 9261 58 4 2 chr4 450376 452317 -201876030 - L1PA5 LINE L1 0 6154 4207 201 132 0 0 chr4 453806 453844 -201874503 + (GA)n Simple_repeat Simple_repeat 1 38 0 23 0 0 0 chr4 455097 455120 -201873227 + AT_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr4 455262 455282 -201873065 + (CAG)n Simple_repeat Simple_repeat 3 22 0 272 304 22 0 chr4 455451 455543 -201872804 - MIR SINE MIR -60 148 55 890 285 14 0 chr4 456266 456487 -201871860 - MER58A DNA MER1_type 0 224 1 282 74 56 0 chr4 456615 456669 -201871678 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 694 303 51 63 chr4 458289 458701 -201869646 - MLT1I LTR MaLR 0 409 3 318 260 0 10 chr4 458948 459140 -201869207 + (TTAGGG)n Simple_repeat Simple_repeat 1 190 0 1646 168 9 7 chr4 459826 460171 -201868176 - MER4A LTR ERV1 0 664 261 667 121 0 10 chr4 460171 460270 -201868077 - MER4A LTR ERV1 -566 98 1 4233 208 177 73 chr4 461152 461677 -201866670 - L1MC3 LINE L1 -1 7784 7315 279 219 14 14 chr4 461677 461750 -201866597 - MLT1F1 LTR MaLR -450 117 45 4233 208 177 73 chr4 461750 462247 -201866100 - L1MC3 LINE L1 -470 7315 6871 3531 208 25 62 chr4 462247 463248 -201865099 - LTR5 LTR ERVK 0 969 6 4233 208 177 73 chr4 463248 463576 -201864771 - L1MC3 LINE L1 -914 6871 6578 1757 184 36 65 chr4 463576 464021 -201864326 - MSTB1 LTR MaLR 0 432 1 4233 208 177 73 chr4 464021 464429 -201863918 - L1MC3 LINE L1 -1207 6578 5762 270 215 15 100 chr4 464576 464669 -201863678 - LTR37A LTR ERV1 -304 122 41 1612 152 98 0 chr4 464669 464933 -201863414 - AluJb SINE Alu -22 290 1 270 215 15 100 chr4 464933 464969 -201863378 - LTR37A LTR ERV1 -385 41 4 1875 189 29 11 chr4 464985 465360 -201862987 - MER31-int LTR ERV1 -696 4240 3859 1297 263 47 8 chr4 465401 465762 -201862585 - LTR10C LTR ERV1 -29 562 188 225 0 0 0 chr4 465784 465809 -201862538 + (CA)n Simple_repeat Simple_repeat 2 26 0 681 174 12 81 chr4 465881 466053 -201862294 - MER31-int LTR ERV1 -1064 3872 3713 7545 34 0 3 chr4 466154 467508 -201860839 - L1PA4 LINE L1 -3 6152 4811 2462 213 47 72 chr4 467508 468147 -201860200 - MER31-int LTR ERV1 -1207 3729 3112 2234 93 0 0 chr4 468147 468456 -201859891 - AluY SINE Alu 0 310 2 2462 213 47 72 chr4 468456 468626 -201859721 - MER31-int LTR ERV1 -1824 3112 2939 1222 214 82 55 chr4 468640 469149 -201859198 - MER31-int LTR ERV1 -2705 2231 1709 1132 154 75 143 chr4 469158 469612 -201858735 + LTR60 LTR ERV1 127 549 -37 * 4151 137 75 166 chr4 469452 472081 -201856266 + TAR1 Satellite telomeric 1 2388 -233 1409 6 11 11 chr4 472081 472261 -201856086 + (TTAGGG)n Simple_repeat Simple_repeat 1 180 0 1857 272 70 19 chr4 672276 672344 -201656003 + L1M4 LINE L1 2197 2260 -3886 2060 120 0 7 chr4 672344 672652 -201655695 + AluSx SINE Alu 2 307 -5 1857 272 70 19 chr4 672652 673274 -201655073 + L1M4 LINE L1 2260 2922 -3224 1894 140 105 79 chr4 673410 673765 -201654582 + Tigger1 DNA MER2_type 1892 2236 -182 2131 109 0 10 chr4 673765 674068 -201654279 + AluSg SINE Alu 1 300 -10 1894 140 105 79 chr4 674068 674100 -201654247 + Tigger1 DNA MER2_type 2236 2266 -152 1851 173 0 7 chr4 674100 674406 -201653941 + AluJb SINE Alu 1 304 -8 1894 140 105 79 chr4 674406 674523 -201653824 + Tigger1 DNA MER2_type 2266 2410 -8 331 294 9 0 chr4 675009 675118 -201653229 + L1MEc LINE L1 636 745 -5651 281 75 0 0 chr4 675125 675165 -201653182 + Alu SINE Alu 1 40 -263 318 332 5 53 chr4 675335 675426 -201652921 + HAL1 LINE L1 1 80 -2427 2192 118 0 0 chr4 675426 675731 -201652616 + AluSg SINE Alu 1 305 -5 318 332 5 53 chr4 675731 675829 -201652518 + HAL1 LINE L1 80 181 -2326 286 261 85 39 chr4 676218 676371 -201651976 + HAL1 LINE L1 689 848 -1659 677 226 35 49 chr4 676471 676661 -201651686 - MER54B LTR ERVL -114 679 491 1851 126 10 7 chr4 676661 676954 -201651393 - AluSx SINE Alu -18 294 1 677 226 35 49 chr4 676954 676989 -201651358 - MER54B LTR ERVL -302 491 457 322 311 136 60 chr4 677390 678229 -201650118 - L1M2 LINE L1 -5578 1271 369 1370 249 68 66 chr4 679010 679112 -201649235 - L1M4 LINE L1 -876 5270 5170 1474 187 21 7 chr4 679112 679396 -201648951 + AluJo SINE Alu 1 288 -24 1370 249 68 66 chr4 679396 680076 -201648271 - L1M4 LINE L1 -976 5170 4487 707 82 21 0 chr4 680186 680283 -201648064 - AluSg/x SINE Alu -14 295 197 1761 111 0 8 chr4 680285 680529 -201647818 - AluSg SINE Alu -68 242 1 * 2033 113 7 20 chr4 680529 680829 -201647518 - AluSq SINE Alu -17 296 1 1166 131 0 17 chr4 680974 681150 -201647197 + AluJo SINE Alu 17 189 -123 726 226 0 20 chr4 681307 681453 -201646894 + AluJb SINE Alu 150 292 -20 22 70 0 0 chr4 681625 681668 -201646679 + GC_rich Low_complexity Low_complexity 1 43 0 211 272 27 34 chr4 681696 681843 -201646504 + (CCCCG)n Simple_repeat Simple_repeat 4 149 0 * 337 275 0 67 chr4 681745 681938 -201646409 + C-rich Low_complexity Low_complexity 1 180 0 22 56 0 0 chr4 681965 682001 -201646346 + GC_rich Low_complexity Low_complexity 1 36 0 25 31 0 0 chr4 682023 682055 -201646292 + GC_rich Low_complexity Low_complexity 1 32 0 478 172 57 0 chr4 685273 685430 -201642917 + (CAGAGA)n Simple_repeat Simple_repeat 1 166 0 2137 184 44 0 chr4 685603 686038 -201642309 - MER54B LTR ERVL -339 454 1 344 179 0 38 chr4 686073 686179 -201642168 + HAL1 LINE L1 1029 1130 -1377 2397 88 0 0 chr4 686179 686484 -201641863 + AluSx SINE Alu 1 305 -7 237 291 63 0 chr4 686484 686563 -201641784 + HAL1 LINE L1 2049 2132 -375 2417 76 0 3 chr4 687264 687568 -201640779 - AluSg SINE Alu -7 303 1 1337 153 19 0 chr4 687678 687894 -201640453 + AluJb SINE Alu 85 304 -8 189 0 0 0 chr4 688297 688318 -201640029 + (A)n Simple_repeat Simple_repeat 1 21 0 2203 90 3 13 chr4 688322 688623 -201639724 + AluSx SINE Alu 1 298 -14 385 234 46 46 chr4 691131 691306 -201637041 + (CAGCC)n Simple_repeat Simple_repeat 1 175 0 579 176 12 18 chr4 693131 693301 -201635046 + (TCTCTG)n Simple_repeat Simple_repeat 3 171 0 353 314 45 125 chr4 693940 694073 -201634274 - L1M4 LINE L1 -2972 3174 3032 2221 106 3 0 chr4 694073 694374 -201633973 - AluSp SINE Alu -11 302 1 2022 91 60 24 chr4 694382 694680 -201633667 - AluSg SINE Alu -1 309 1 353 314 45 125 chr4 694680 694730 -201633617 - L1M4 LINE L1 -3121 3025 2973 1323 199 64 18 chr4 694730 695012 -201633335 - AluJo SINE Alu -4 298 4 353 314 45 125 chr4 695012 695289 -201633058 - L1M4 LINE L1 -3173 2973 2742 407 349 88 0 chr4 695350 695542 -201632805 + MIR SINE MIR 7 215 -47 897 204 19 0 chr4 698098 698255 -201630092 - FRAM SINE Alu -6 160 1 2150 76 38 3 chr4 698283 698573 -201629774 + AluY SINE Alu 1 300 -11 1829 87 61 4 chr4 698576 698840 -201629507 + AluSq SINE Alu 1 279 -34 418 350 154 28 chr4 700270 700633 -201627714 - L1M4 LINE L1 -787 5359 4951 2174 93 13 7 chr4 700814 701116 -201627231 - AluSp SINE Alu -1 312 9 2033 125 0 7 chr4 701126 701422 -201626925 - AluSx SINE Alu -18 294 1 951 181 43 11 chr4 701522 701710 -201626637 - L1MB3 LINE L1 -1 6182 5989 270 316 118 0 chr4 701738 701874 -201626473 + L1MB8 LINE L1 6026 6177 -1 1670 145 71 18 chr4 702527 702810 -201625537 - AluJo SINE Alu -14 298 1 1228 207 13 53 chr4 702812 703098 -201625249 + L1ME1 LINE L1 4895 5164 -982 3543 154 71 119 chr4 703098 703694 -201624653 + MER21A LTR ERV1 1 533 -398 2210 119 0 0 chr4 703694 703997 -201624350 + AluSx SINE Alu 1 303 -9 3543 154 71 119 chr4 703997 704375 -201623972 + MER21A LTR ERV1 533 928 -3 1228 207 13 53 chr4 704375 704465 -201623882 + L1ME1 LINE L1 5164 5256 -890 941 88 0 0 chr4 704466 704591 -201623756 + AluSx SINE Alu 1 125 -188 189 171 0 0 chr4 704591 704626 -201623721 + (CATATA)n Simple_repeat Simple_repeat 4 38 0 263 221 23 0 chr4 704631 704717 -201623630 + L1MC4 LINE L1 6614 6701 -1341 832 157 0 0 chr4 704718 704852 -201623495 + AluSx SINE Alu 1 134 -178 207 162 0 0 chr4 704852 704889 -201623458 + (CATATA)n Simple_repeat Simple_repeat 2 38 0 246 218 51 0 chr4 704894 704972 -201623375 + L1MC4 LINE L1 6614 6695 -1347 1160 147 0 0 chr4 704972 705142 -201623205 + AluSx SINE Alu 123 292 -18 2175 92 0 30 chr4 705146 705450 -201622897 + AluSg SINE Alu 1 295 -15 481 154 86 8 chr4 705456 705573 -201622774 + L1ME1 LINE L1 5258 5383 -950 1103 221 24 4 chr4 705629 705883 -201622464 + Tigger3(Golem) DNA MER2_type 2771 3029 0 2010 241 52 10 chr4 705887 706496 -201621851 + L1ME1 LINE L1 5352 5986 -180 813 304 67 52 chr4 706592 706781 -201621566 + L1 LINE L1 2745 2930 -3216 2157 113 0 10 chr4 706781 707082 -201621265 + AluSg SINE Alu 1 298 -12 813 304 67 52 chr4 707082 707313 -201621034 + L1 LINE L1 2930 3171 -2975 762 310 21 7 chr4 707409 707502 -201620845 + MER7A DNA MER2_type 1 91 -2947 2147 61 40 24 chr4 707502 707798 -201620549 - AluY SINE Alu -10 301 1 1918 126 42 3 chr4 707798 708084 -201620263 - AluSx SINE Alu -15 297 1 762 310 21 7 chr4 708084 708276 -201620071 + MER7A DNA MER2_type 90 289 -57 644 354 51 60 chr4 708359 708858 -201619489 + L1 LINE L1 4208 4701 -1445 4368 157 22 1 chr4 709506 710244 -201618103 + L1MB3 LINE L1 5431 6183 0 5331 105 16 5 chr4 710249 711590 -201616757 + L1PA10 LINE L1 4724 6150 -18 2081 98 0 33 chr4 711590 711897 -201616450 - AluSq SINE Alu -16 297 1 1281 185 8 13 chr4 712099 712337 -201616010 + AluJb SINE Alu 1 237 -75 272 25 50 0 chr4 712344 712384 -201615963 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 322 381 59 23 chr4 712603 713107 -201615240 + L1 LINE L1 3081 3689 -2457 1141 309 127 35 chr4 713777 714157 -201614190 - L1ME1 LINE L1 -66 6100 5756 2542 59 0 0 chr4 714157 714462 -201613885 - AluY SINE Alu -6 305 1 1141 309 127 35 chr4 714462 714797 -201613550 - L1ME1 LINE L1 -410 5756 5319 2407 96 0 0 chr4 714797 715110 -201613237 - AluSq SINE Alu 0 313 1 627 202 0 0 chr4 715115 715219 -201613128 - FRAM SINE Alu -14 162 59 1928 134 7 3 chr4 716583 716874 -201611473 - AluJb SINE Alu -18 294 3 2252 78 0 10 chr4 717926 718221 -201610126 - AluY SINE Alu -19 292 1 617 185 92 0 chr4 718488 718607 -201609740 - FLAM_C SINE Alu -1 132 3 617 285 97 0 chr4 718738 718966 -201609381 - L1MC/D LINE L1 -586 5773 5524 2338 77 3 0 chr4 719278 719577 -201608770 - AluSx SINE Alu -12 300 1 1280 20 0 0 chr4 719595 719742 -201608605 - SVA Other Other 0 1386 1240 395 216 78 0 chr4 719745 719861 -201608486 - L1MC/D LINE L1 -817 5329 5205 1140 335 64 34 chr4 720069 720243 -201608104 - L1MC/D LINE L1 -1278 4868 4701 2392 55 3 0 chr4 720243 720534 -201607813 + AluY SINE Alu 1 292 -19 1140 335 64 34 chr4 720534 721144 -201607203 - L1MC/D LINE L1 -1445 4701 4061 2015 113 48 3 chr4 721166 721458 -201606889 + AluSx SINE Alu 1 305 -7 789 175 0 58 chr4 721471 721625 -201606722 - FRAM SINE Alu -24 152 8 734 231 95 27 chr4 722133 722354 -201605993 - AluJo SINE Alu -76 236 1 1243 271 60 17 chr4 722446 722516 -201605831 - L1MC/D LINE L1 -2211 3935 3869 528 114 13 0 chr4 722516 722595 -201605752 + MADE1 DNA Mariner 1 80 0 1243 271 60 17 chr4 722595 723060 -201605287 - L1MC/D LINE L1 -2277 3869 3377 236 368 129 21 chr4 723240 723580 -201604767 - L1MC/D LINE L1 -3010 3136 2760 310 299 17 0 chr4 723668 723785 -201604562 - L1MC/D LINE L1 -3538 2608 2490 724 213 0 7 chr4 725573 725714 -201602633 + AluJo SINE Alu 86 225 -87 716 194 8 8 chr4 725707 725841 -201602506 + AluJo/FRAM SINE Alu 163 296 -16 * 367 304 56 43 chr4 725891 726052 -201602295 + L1ME1 LINE L1 5262 5424 -2384 3678 183 56 67 chr4 726310 726788 -201601559 + Tigger1 DNA MER2_type 20 502 -1916 1631 157 27 20 chr4 726788 727081 -201601266 + AluJb SINE Alu 1 295 -17 3678 183 56 67 chr4 727081 727589 -201600758 + Tigger1 DNA MER2_type 502 995 -1423 239 207 49 37 chr4 727589 727671 -201600676 + Tigger1 DNA MER2_type 913 995 -1423 252 207 49 37 chr4 727671 727753 -201600594 + Tigger1 DNA MER2_type 913 995 -1423 2221 65 7 0 chr4 727873 728151 -201600196 + AluY SINE Alu 16 295 -16 1265 147 8 37 chr4 728153 728398 -201599949 + Tigger1 DNA MER2_type 1173 1410 -1008 291 195 26 26 chr4 732138 732215 -201596132 - MER58 DNA MER1_type -2311 109 33 266 272 20 54 chr4 732761 732908 -201595439 + (CACG)n Simple_repeat Simple_repeat 2 143 0 * 477 234 0 65 chr4 732830 733014 -201595333 + (CA)n Simple_repeat Simple_repeat 1 172 0 213 218 0 52 chr4 733075 733276 -201595071 + (CA)n Simple_repeat Simple_repeat 1 190 0 268 232 0 56 chr4 733297 733592 -201594755 + (CA)n Simple_repeat Simple_repeat 1 278 0 474 265 0 49 chr4 733607 733792 -201594555 + (CA)n Simple_repeat Simple_repeat 2 177 0 241 201 13 40 chr4 733803 733952 -201594395 + (CA)n Simple_repeat Simple_repeat 2 146 0 349 241 73 0 chr4 736872 736970 -201591377 - AluJ/FLAM SINE Alu -217 85 1 509 270 128 0 chr4 736970 737174 -201591173 - L1M4 LINE L1 -3119 3027 2798 863 259 64 4 chr4 737725 737991 -201590356 + L1ME1 LINE L1 5566 5847 -319 341 299 51 51 chr4 737991 738176 -201590171 + L1MD2 LINE L1 5973 6135 -224 2088 96 24 10 chr4 738193 738484 -201589863 - AluSp SINE Alu -17 296 2 1667 176 3 37 chr4 739101 739424 -201588923 + AluSx SINE Alu 1 312 0 1712 148 35 0 chr4 739429 739713 -201588634 + AluJo SINE Alu 6 299 -13 4268 176 79 129 chr4 739741 741526 -201586821 - pTR5 LTR ERV1 0 2438 743 2070 113 10 0 chr4 742093 742371 -201585976 + AluSx SINE Alu 1 284 -28 297 0 0 0 chr4 742371 742404 -201585943 + (CA)n Simple_repeat Simple_repeat 2 34 0 2070 113 10 0 chr4 742404 742425 -201585922 + AluSx SINE Alu 284 303 -9 2334 82 3 3 chr4 743502 743808 -201584539 - AluSc SINE Alu -3 306 1 2150 117 0 13 chr4 743814 744130 -201584217 - AluSx SINE Alu 0 312 1 23 0 0 0 chr4 748306 748329 -201580018 + AT_rich Low_complexity Low_complexity 1 23 0 2312 84 0 0 chr4 749456 749752 -201578595 - AluY SINE Alu -15 296 1 442 236 138 11 chr4 750595 750769 -201577578 - L1MC1 LINE L1 -1 6332 6137 1698 223 61 17 chr4 750885 751410 -201576937 - L1MC1 LINE L1 -382 5951 5404 265 347 35 15 chr4 753528 753727 -201574620 + L1MEd LINE L1 1306 1508 -5022 370 310 85 3 chr4 753729 753879 -201574468 + L1MEd LINE L1 1533 1696 -4844 1826 104 4 4 chr4 754926 755194 -201573153 - AluSc SINE Alu -3 306 39 1439 126 0 0 chr4 755294 755501 -201572846 + AluSq SINE Alu 91 297 -16 231 264 58 11 chr4 755513 755600 -201572747 - L1MC1 LINE L1 -2204 3942 3852 327 299 125 69 chr4 756076 757063 -201571284 + L1M2 LINE L1 369 1250 -5599 2135 99 10 6 chr4 760121 760433 -201567914 + AluSq SINE Alu 1 313 0 1006 235 40 99 chr4 760433 760879 -201567468 - Cheshire DNA MER1_type -1584 836 417 264 200 146 0 chr4 761030 761140 -201567207 - Cheshire DNA MER1_type -2216 204 79 448 184 0 0 chr4 761144 761220 -201567127 - AluJ/FLAM SINE Alu -236 76 1 442 241 25 64 chr4 762303 762336 -201566011 + L1MC5 LINE L1 7552 7585 -376 1687 166 44 0 chr4 762336 762631 -201565716 + AluJb SINE Alu 1 308 -4 442 241 25 64 chr4 762631 762800 -201565547 + L1MC5 LINE L1 7585 7746 -215 2215 86 0 35 chr4 762946 763260 -201565087 - AluSg SINE Alu -7 303 1 361 273 81 68 chr4 763758 763919 -201564428 - L1M4 LINE L1 -1575 4571 4409 1527 108 5 0 chr4 763926 764140 -201564207 + AluSg SINE Alu 1 215 -95 296 169 70 14 chr4 764248 764319 -201564028 + L1MD3 LINE L1 7921 7995 0 306 325 6 12 chr4 767462 767625 -201560722 + (CA)n Simple_repeat Simple_repeat 1 162 0 21 0 0 0 chr4 768078 768099 -201560248 + GC_rich Low_complexity Low_complexity 1 21 0 23 33 0 0 chr4 769307 769337 -201559010 + GC_rich Low_complexity Low_complexity 1 30 0 310 382 94 9 chr4 769443 769676 -201558671 + HAL1 LINE L1 1011 1263 -1244 259 261 125 45 chr4 772949 773125 -201555222 - MLT1C LTR MaLR -269 198 9 21 57 0 0 chr4 774390 774425 -201553922 + GC_rich Low_complexity Low_complexity 1 35 0 2000 112 0 31 chr4 776213 776534 -201551813 + AluY SINE Alu 1 311 0 1370 187 100 2 chr4 776545 776929 -201551418 - MER31A LTR ERV1 -21 445 1 2351 55 3 0 chr4 777437 777729 -201550618 - AluY SINE Alu -18 293 1 512 261 252 13 chr4 777853 778167 -201550180 - L2 LINE L2 -14 3299 2911 538 107 68 10 chr4 779789 779892 -201548455 - MER34B LTR ERV1 -155 410 302 551 224 176 0 chr4 779960 780019 -201548328 + L1MC3 LINE L1 6784 6831 -954 2080 119 3 3 chr4 780019 780321 -201548026 + AluSp SINE Alu 1 302 -11 551 224 176 0 chr4 780321 780471 -201547876 + L1MC3 LINE L1 6831 7030 -755 352 133 42 0 chr4 780471 780554 -201547793 + FRAM/FAM SINE Alu 21 84 -91 335 285 60 98 chr4 780666 780901 -201547446 - L1MEc LINE L1 -3810 2572 2347 235 291 0 13 chr4 781097 781176 -201547171 + (TG)n Simple_repeat Simple_repeat 1 78 0 451 305 110 54 chr4 781334 782037 -201546310 - L1MEc LINE L1 -4638 1895 999 1779 119 8 0 chr4 782675 782927 -201545420 + AluSx SINE Alu 40 293 -19 180 233 50 67 chr4 783161 783221 -201545126 + L2 LINE L2 3204 3262 -10 309 292 62 10 chr4 784843 784939 -201543408 - L1MCa LINE L1 -3102 3324 3224 211 200 0 0 chr4 784943 784978 -201543369 + (TATG)n Simple_repeat Simple_repeat 2 36 0 1103 258 36 32 chr4 785010 785084 -201543263 - L1MCa LINE L1 -3212 3214 3142 1600 114 0 5 chr4 785084 785304 -201543043 + AluSg SINE Alu 1 219 -91 1103 258 36 32 chr4 785304 785698 -201542649 - L1MCa LINE L1 -3284 3142 2744 340 315 152 16 chr4 785912 786169 -201542178 + MLT1E LTR MaLR 301 592 -1 515 327 97 4 chr4 786182 786460 -201541887 - L1MCa LINE L1 -4002 2605 2302 402 304 57 53 chr4 786493 786756 -201541591 - L1MCa LINE L1 -4837 1591 1275 846 99 0 0 chr4 792269 792380 -201535967 + AluSp SINE Alu 1 111 -202 1592 130 53 37 chr4 792738 793037 -201535310 - AluJo SINE Alu -8 304 1 266 195 134 12 chr4 793164 793246 -201535101 + MER68 LTR ERV1 60 151 -411 502 265 0 32 chr4 793982 794167 -201534180 + (CA)n Simple_repeat Simple_repeat 1 179 0 * 510 318 11 19 chr4 794119 794547 -201533800 + (CACG)n Simple_repeat Simple_repeat 1 424 0 416 326 0 27 chr4 794528 794712 -201533635 + (CA)n Simple_repeat Simple_repeat 1 179 0 * 339 365 0 0 chr4 794789 794967 -201533380 + (CA)n Simple_repeat Simple_repeat 1 178 0 320 234 124 29 chr4 797032 797169 -201531178 + MER77 LTR ERV1 62 211 -394 418 293 55 0 chr4 797191 797372 -201530975 + MER77 LTR ERV1 407 597 -8 1982 112 3 39 chr4 797922 798234 -201530113 - AluSx SINE Alu -9 303 3 711 133 0 0 chr4 798236 798341 -201530006 - AluSg/x SINE Alu -8 301 197 2159 79 7 0 chr4 801676 801993 -201526354 + AluSg SINE Alu 1 319 0 1768 136 3 29 chr4 802955 803263 -201525084 + AluJo SINE Alu 1 300 -12 207 315 0 0 chr4 803286 803340 -201525007 + GA-rich Low_complexity Low_complexity 6 59 0 331 202 20 50 chr4 804550 804649 -201523698 + L1MC2 LINE L1 6240 6335 -9 1964 84 0 15 chr4 804654 804917 -201523430 + AluSc SINE Alu 15 273 -36 2313 75 0 3 chr4 805555 805850 -201522497 + AluSx SINE Alu 1 294 -18 256 262 0 16 chr4 807775 807836 -201520511 + GA-rich Low_complexity Low_complexity 3 62 0 2144 102 3 7 chr4 808932 809236 -201519111 + AluSx SINE Alu 1 303 -9 1537 167 30 13 chr4 809304 809603 -201518744 + AluJb SINE Alu 3 306 -6 329 313 123 20 chr4 809787 809982 -201518365 + L1ME1 LINE L1 5263 5477 -882 2491 147 159 16 chr4 811782 812328 -201516019 + MER51A LTR ERV1 2 625 -9 467 213 48 69 chr4 812412 812764 -201515583 + (CACGC)n Simple_repeat Simple_repeat 1 344 0 789 174 8 0 chr4 815362 815494 -201512853 + AluJo SINE Alu 3 135 -177 1399 181 72 22 chr4 815494 815771 -201512576 + AluJo SINE Alu 1 291 -21 1721 91 0 29 chr4 815883 816125 -201512222 - AluSq SINE Alu -78 235 1 212 296 0 34 chr4 821289 821465 -201506882 + (CA)n Simple_repeat Simple_repeat 1 170 0 429 309 85 15 chr4 822212 822489 -201505858 + L1ME1 LINE L1 3138 3779 -2367 1179 293 20 8 chr4 822586 822978 -201505369 + L1ME1 LINE L1 3944 4340 -1806 1728 240 88 11 chr4 822982 823182 -201505165 + L1ME1 LINE L1 5075 5258 -908 1528 141 148 0 chr4 823182 823438 -201504909 - AluJb SINE Alu -6 296 3 1728 240 88 11 chr4 823438 824051 -201504296 + L1ME1 LINE L1 5258 5943 -223 230 328 25 42 chr4 824399 824640 -201503707 + L1ME1 LINE L1 5841 6077 -89 26 0 0 0 chr4 824723 824749 -201503598 + AT_rich Low_complexity Low_complexity 1 26 0 1083 252 232 2 chr4 824811 825355 -201502992 + L1MD1 LINE L1 3527 4195 -1951 450 186 0 21 chr4 825361 825458 -201502889 + L1MA8 LINE L1 6026 6120 -171 483 221 31 0 chr4 825463 825590 -201502757 + L1MA8 LINE L1 6157 6287 -4 570 315 89 33 chr4 826311 826780 -201501567 + L2 LINE L2 2776 3279 -34 909 144 14 14 chr4 826800 826946 -201501401 + FRAM SINE Alu 13 158 -18 2193 87 10 16 chr4 826952 827261 -201501086 + AluY SINE Alu 5 311 0 2397 66 0 3 chr4 827494 827796 -201500551 - AluSc SINE Alu -8 301 1 793 217 120 77 chr4 827920 828049 -201500298 + L1MD1 LINE L1 4725 4847 -1395 2187 100 30 0 chr4 828049 828348 -201499999 - AluSx SINE Alu -4 308 1 793 217 120 77 chr4 828348 828990 -201499357 + L1MD1 LINE L1 4847 5520 -722 921 221 142 40 chr4 828993 829187 -201499160 + MLT1B LTR MaLR 1 174 -216 2245 103 0 0 chr4 829187 829489 -201498858 + AluSx SINE Alu 1 302 -10 921 221 142 40 chr4 829489 829647 -201498700 + MLT1B LTR MaLR 174 389 -1 1207 210 73 6 chr4 829648 829962 -201498385 + L1MD1 LINE L1 5527 5861 -381 416 263 226 29 chr4 829963 830237 -201498110 + L1MD1 LINE L1 5915 6242 0 1875 141 0 21 chr4 830341 830631 -201497716 + AluJo SINE Alu 1 284 -28 22 0 0 0 chr4 830776 830798 -201497549 + AT_rich Low_complexity Low_complexity 1 22 0 1192 217 25 39 chr4 830833 830857 -201497490 + L1ME LINE L1 5369 5392 -772 2019 108 30 3 chr4 830857 831152 -201497195 + AluSx SINE Alu 1 303 -9 1192 217 25 39 chr4 831152 831487 -201496860 + L1ME LINE L1 5392 5723 -441 607 185 15 11 chr4 831551 831687 -201496660 + MSTA LTR MaLR 3 141 -234 229 245 0 0 chr4 831854 831907 -201496440 + MSTA LTR MaLR 129 181 -247 456 219 0 0 chr4 831944 832040 -201496307 + AluSg/x SINE Alu 209 304 -6 1338 158 113 34 chr4 832516 832844 -201495503 + MLT1A1 LTR MaLR 12 365 0 483 352 82 9 chr4 833336 833569 -201494778 + MIR SINE MIR 4 253 -9 221 212 0 30 chr4 833770 833836 -201494511 + (CCGCT)n Simple_repeat Simple_repeat 4 67 0 2203 104 3 0 chr4 834098 834387 -201493960 - AluSx SINE Alu -22 290 1 779 191 19 13 chr4 834413 834570 -201493777 + FRAM SINE Alu 1 158 -18 2280 97 7 0 chr4 834782 835091 -201493256 - AluSp SINE Alu -2 311 1 600 195 55 16 chr4 835602 835730 -201492617 + FLAM_A SINE Alu 1 133 0 770 206 41 85 chr4 835805 836121 -201492226 + MER46C DNA MER2_type 20 321 -17 427 284 147 47 chr4 839218 839248 -201489099 + MER102b DNA MER1_type 86 112 -1316 1895 59 134 0 chr4 839248 839525 -201488822 + AluSq SINE Alu 2 312 0 427 284 147 47 chr4 839525 839723 -201488624 + MER102b DNA MER1_type 112 340 -1 257 114 286 0 chr4 839834 839904 -201488443 + LTR54 LTR ERV1 391 480 -30 801 339 120 48 chr4 840146 841082 -201487265 - L2 LINE L2 -1010 2304 1302 1677 201 143 55 chr4 841378 842089 -201486258 + L1MC2 LINE L1 2320 3086 -3060 1340 123 0 47 chr4 842109 842320 -201486027 + AluSx SINE Alu 35 235 -77 3631 201 91 136 chr4 842342 842696 -201485651 + L1MC2 LINE L1 3073 3441 -2705 2136 107 0 10 chr4 842696 842995 -201485352 + AluSc SINE Alu 1 296 -13 3631 201 91 136 chr4 842995 843085 -201485262 + L1MC2 LINE L1 3441 3534 -2612 835 79 44 0 chr4 843085 843199 -201485148 + L1MA2 LINE L1 6186 6304 0 3631 201 91 136 chr4 843199 843304 -201485043 + L1MC2 LINE L1 3534 3642 -2504 2085 132 3 0 chr4 843304 843599 -201484748 + AluSq SINE Alu 1 296 -17 3631 201 91 136 chr4 843599 844244 -201484103 + L1MC2 LINE L1 3642 4315 -1831 2271 106 0 0 chr4 844244 844545 -201483802 + AluSx SINE Alu 1 301 -11 3631 201 91 136 chr4 844545 845038 -201483309 + L1MC2 LINE L1 4315 4765 -1381 561 204 0 0 chr4 845038 845136 -201483211 + FLAM_A SINE Alu 1 98 -44 3631 201 91 136 chr4 845136 845319 -201483028 + L1MC2 LINE L1 4765 4955 -1191 1137 67 0 0 chr4 845321 845456 -201482891 + AluSp SINE Alu 1 135 -178 2290 106 0 0 chr4 845456 845757 -201482590 + AluSx SINE Alu 1 301 -11 501 235 137 0 chr4 845762 845945 -201482402 + L1MC2 LINE L1 4958 5165 -981 2160 176 46 18 chr4 845977 846189 -201482158 + L1MC2 LINE L1 5753 5958 -386 2263 96 3 0 chr4 846189 846491 -201481856 + AluSq SINE Alu 1 303 -10 2160 176 46 18 chr4 846491 846748 -201481599 + L1MC2 LINE L1 5958 6240 -104 2267 89 0 0 chr4 846748 847072 -201481275 + AluSg SINE Alu 1 324 0 2160 176 46 18 chr4 847072 847100 -201481247 + L1MC2 LINE L1 6240 6266 -78 2210 101 7 3 chr4 847118 847415 -201480932 + AluSq SINE Alu 1 298 -15 441 204 0 0 chr4 849882 850019 -201478328 + (TG)n Simple_repeat Simple_repeat 1 137 0 219 177 0 0 chr4 850047 850109 -201478238 + (TG)n Simple_repeat Simple_repeat 2 63 0 243 0 0 0 chr4 850971 850998 -201477349 + (TG)n Simple_repeat Simple_repeat 1 27 0 252 200 0 0 chr4 851040 851100 -201477247 + (CA)n Simple_repeat Simple_repeat 1 60 0 305 360 81 37 chr4 851525 851897 -201476450 + L1MDa LINE L1 1271 1610 -1291 34 42 0 0 chr4 851901 851949 -201476398 + GC_rich Low_complexity Low_complexity 1 48 0 201 121 0 0 chr4 852327 852360 -201475987 + (CTG)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr4 852368 852389 -201475958 + GC_rich Low_complexity Low_complexity 1 21 0 195 235 0 0 chr4 854590 854641 -201473706 + G-rich Low_complexity Low_complexity 2 52 0 241 324 20 10 chr4 854954 855056 -201473291 + (CGTG)n Simple_repeat Simple_repeat 1 103 0 228 335 0 58 chr4 855009 855197 -201473150 + (TG)n Simple_repeat Simple_repeat 2 178 0 * 211 366 0 17 chr4 855319 855491 -201472856 + (TG)n Simple_repeat Simple_repeat 1 169 0 183 42 0 0 chr4 855542 855566 -201472781 + (TG)n Simple_repeat Simple_repeat 2 25 0 264 120 0 0 chr4 855759 855809 -201472538 + (TG)n Simple_repeat Simple_repeat 2 51 0 2125 77 42 0 chr4 857929 858214 -201470133 - AluSx SINE Alu -13 299 3 256 178 27 0 chr4 859721 859794 -201468553 + (TG)n Simple_repeat Simple_repeat 2 76 0 253 83 0 0 chr4 864152 864200 -201464147 - L1PA2 LINE L1 0 6155 6108 200 187 0 13 chr4 865258 865333 -201463014 + (CGGG)n Simple_repeat Simple_repeat 3 76 0 22 35 0 0 chr4 869353 869382 -201458965 + GC_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr4 869490 869513 -201458834 + GC_rich Low_complexity Low_complexity 1 23 0 297 0 0 0 chr4 871203 871236 -201457111 + (TCTCCC)n Simple_repeat Simple_repeat 5 37 0 6715 48 2 154 chr4 871242 872420 -201455927 + SVA Other Other 50 1047 -339 471 266 21 7 chr4 872562 872705 -201455642 - MLT1A2 LTR MaLR 0 374 230 1096 228 87 3 chr4 872749 873095 -201455252 + MLT1C LTR MaLR 3 377 -90 296 373 32 0 chr4 873085 873211 -201455136 + MER82 DNA MER2_type 516 645 -8 * 928 81 0 0 chr4 873573 873696 -201454651 - AluSp/q SINE Alu -16 297 175 217 230 13 0 chr4 873808 873960 -201454387 + (CA)n Simple_repeat Simple_repeat 2 155 0 202 217 0 17 chr4 873973 874033 -201454314 + (CCCA)n Simple_repeat Simple_repeat 3 61 0 316 195 20 23 chr4 874035 874294 -201454053 + (CA)n Simple_repeat Simple_repeat 1 258 0 364 266 12 0 chr4 874313 874482 -201453865 + (CA)n Simple_repeat Simple_repeat 2 172 0 236 284 15 0 chr4 878187 878254 -201450093 + MIR SINE MIR 82 149 -59 2266 87 3 3 chr4 879120 879420 -201448927 + AluSg SINE Alu 1 300 -10 252 255 0 32 chr4 880458 880552 -201447795 + C-rich Low_complexity Low_complexity 1 91 0 183 333 0 0 chr4 882018 882063 -201446284 + L2 LINE L2 3225 3269 -3 2050 125 0 7 chr4 888276 888579 -201439768 - AluJb SINE Alu -11 301 1 1718 234 96 71 chr4 888943 889097 -201439250 - L1ME1 LINE L1 -75 6091 5942 2040 114 7 0 chr4 889097 889387 -201438960 - AluSx SINE Alu -20 292 1 1718 234 96 71 chr4 889387 889846 -201438501 - L1ME1 LINE L1 -224 5942 5449 2202 114 0 0 chr4 889846 890152 -201438195 + AluSx SINE Alu 1 306 -6 1718 234 96 71 chr4 890152 890458 -201437889 - L1ME1 LINE L1 -717 5449 5152 2304 110 0 0 chr4 890458 890766 -201437581 + AluSx SINE Alu 1 308 -4 1454 193 72 34 chr4 890769 891033 -201437314 + L1ME LINE L1 4664 4951 -1195 2225 93 0 26 chr4 891033 891343 -201437004 + AluSc SINE Alu 1 302 -7 1454 193 72 34 chr4 891343 891492 -201436855 + L1ME LINE L1 4951 5093 -1053 615 137 154 17 chr4 891493 891610 -201436737 - FLAM_C SINE Alu 0 133 1 2009 119 11 0 chr4 891662 891948 -201436399 + AluSx SINE Alu 1 289 -23 524 299 60 9 chr4 893311 893528 -201434819 + L1ME LINE L1 5359 5586 -578 536 15 0 0 chr4 893528 893593 -201434754 - AluY SINE Alu -10 300 236 22 35 0 0 chr4 893877 893906 -201434441 + GC_rich Low_complexity Low_complexity 1 29 0 403 306 177 23 chr4 896340 896640 -201431707 - L2 LINE L2 -254 3059 2806 2093 67 0 4 chr4 896640 896908 -201431439 - AluY SINE Alu -3 308 42 403 306 177 23 chr4 896908 897144 -201431203 - L2 LINE L2 -507 2806 2421 261 266 6 51 chr4 898425 898583 -201429764 + G-rich Low_complexity Low_complexity 5 155 0 633 175 79 16 chr4 900497 900524 -201427823 - AluJo/FRAM SINE Alu -14 298 274 2365 74 3 0 chr4 900524 900821 -201427526 + AluSg SINE Alu 1 298 -12 633 175 79 16 chr4 900821 900919 -201427428 - AluJo/FRAM SINE Alu -38 274 165 948 178 12 0 chr4 900931 901100 -201427247 - AluJo SINE Alu -21 291 121 2053 102 3 22 chr4 901129 901443 -201426904 + AluSc SINE Alu 1 308 -1 582 279 177 42 chr4 901444 901480 -201426867 - MER69 DNA AcHobo -64 2462 2432 2049 116 3 7 chr4 901480 901781 -201426566 + AluSx SINE Alu 1 300 -12 2350 84 0 3 chr4 901781 902092 -201426255 + AluSg SINE Alu 1 310 0 582 279 177 42 chr4 902092 902642 -201425705 - MER69 DNA AcHobo -93 2433 1796 357 227 84 17 chr4 903073 903192 -201425155 - MER74B LTR ERVL 0 622 496 259 194 65 0 chr4 903417 903479 -201424868 - MER74B LTR ERVL -483 139 74 2397 76 0 0 chr4 903479 903780 -201424567 + AluSq SINE Alu 1 301 -12 340 169 26 13 chr4 903935 904012 -201424335 + MER107 DNA MER1_type 71 148 -49 439 336 38 15 chr4 904083 904348 -201423999 + HERVL74 LTR ERVL 1671 1941 -3744 383 123 0 0 chr4 904425 904490 -201423857 + HERVL74 LTR ERVL 2096 2160 -3525 1511 164 17 40 chr4 904505 904647 -201423700 + AluJb SINE Alu 1 145 -167 180 0 0 0 chr4 904647 904667 -201423680 + (CAAT)n Simple_repeat Simple_repeat 1 20 0 1511 164 17 40 chr4 904667 904822 -201423525 + AluJb SINE Alu 145 291 -21 2410 218 60 35 chr4 904825 904992 -201423355 + HERVL74 LTR ERVL 2241 2402 -3283 2332 73 0 13 chr4 904992 905294 -201423053 - AluY SINE Alu -13 298 1 2410 218 60 35 chr4 905294 905930 -201422417 + HERVL74 LTR ERVL 2402 3064 -2621 362 291 52 23 chr4 906015 906187 -201422160 - MLT1D LTR MaLR -264 241 65 1576 216 138 12 chr4 906383 906922 -201421425 + MER39B LTR ERV1 1 649 -4 2305 100 0 0 chr4 907000 907299 -201421048 - AluSx SINE Alu -13 299 1 225 228 0 13 chr4 907332 907411 -201420936 - L1MB8 LINE L1 -4 6174 6097 534 250 83 74 chr4 907433 907729 -201420618 - L1MD3 LINE L1 0 8042 7770 1851 119 93 0 chr4 907729 908007 -201420340 + AluSx SINE Alu 7 310 -2 534 250 83 74 chr4 908007 908135 -201420212 - L1MD3 LINE L1 -272 7770 7645 333 314 32 16 chr4 908664 908788 -201419559 - L1ME LINE L1 -5932 138 13 1440 224 13 19 chr4 909088 909396 -201418951 - AluJo SINE Alu -6 306 1 1150 142 29 0 chr4 909470 909674 -201418673 + MER2 DNA MER2_type 1 210 -135 242 172 52 0 chr4 909713 909771 -201418576 + MER2 DNA MER2_type 280 340 -5 821 183 0 0 chr4 909819 909961 -201418386 + AluSg/x SINE Alu 171 312 0 381 329 17 69 chr4 913105 913187 -201415160 + L1ME1 LINE L1 5776 5861 -305 1636 170 47 55 chr4 913187 913551 -201414796 - THE1B LTR MaLR 0 364 4 381 329 17 69 chr4 913551 913699 -201414648 + L1ME1 LINE L1 5861 5994 -172 1433 140 131 44 chr4 914934 915235 -201413112 + THE1C LTR MaLR 1 274 -101 2260 70 3 26 chr4 915235 915537 -201412810 - AluY SINE Alu -16 295 1 243 0 0 0 chr4 915537 915564 -201412783 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1967 105 3 47 chr4 915564 915860 -201412487 - AluSg SINE Alu -27 283 1 1433 140 131 44 chr4 915860 915899 -201412448 + THE1C LTR MaLR 273 373 -2 324 237 144 17 chr4 916199 916250 -201412097 + L1MEc LINE L1 55 98 -6298 2081 124 0 3 chr4 916250 916548 -201411799 - AluSx SINE Alu -15 297 1 324 237 144 17 chr4 916548 916614 -201411733 + L1MEc LINE L1 98 187 -6209 3228 260 81 76 chr4 916854 916974 -201411373 + L1MEc LINE L1 1732 1850 -4365 1703 152 27 14 chr4 916974 917271 -201411076 + AluJo SINE Alu 12 312 0 3228 260 81 76 chr4 917271 917868 -201410479 + L1MEc LINE L1 1850 2443 -3772 2472 71 0 0 chr4 917868 918178 -201410169 + AluY SINE Alu 1 310 -1 3228 260 81 76 chr4 918178 919692 -201408655 + L1MEc LINE L1 2443 3949 -2266 1694 190 88 41 chr4 919692 920103 -201408244 + MSTB1 LTR MaLR 2 431 -1 2087 116 3 3 chr4 920111 920405 -201407942 + AluSq SINE Alu 1 294 -19 3228 260 81 76 chr4 920405 920991 -201407356 + L1MEc LINE L1 3955 4569 -1646 2120 99 7 0 chr4 920991 921283 -201407064 - AluSx SINE Alu -18 294 1 3228 260 81 76 chr4 921283 921765 -201406582 + L1MEc LINE L1 4569 5047 -1168 779 306 65 44 chr4 923018 923502 -201404845 - L1MB7 LINE L1 -9 6165 5676 260 267 13 20 chr4 925991 926141 -201402206 + CT-rich Low_complexity Low_complexity 2 150 0 318 366 57 60 chr4 931187 931452 -201396895 + HAL1 LINE L1 1013 1276 -1231 736 153 0 0 chr4 937303 937414 -201390933 + FLAM_C SINE Alu 1 111 -32 1350 118 24 0 chr4 937420 937631 -201390716 - AluY SINE Alu -12 299 84 278 125 0 0 chr4 937632 937672 -201390675 - AluY SINE Alu -52 249 210 28 29 0 0 chr4 938869 938904 -201389443 + AT_rich Low_complexity Low_complexity 1 35 0 2274 56 3 11 chr4 940224 940510 -201387837 - AluY SINE Alu -27 284 1 2222 105 0 0 chr4 940510 940804 -201387543 - AluSg SINE Alu -16 294 1 819 234 148 10 chr4 940807 940993 -201387354 - L1MEc LINE L1 -4347 2049 1890 1787 117 0 0 chr4 940993 941240 -201387107 + AluSx SINE Alu 48 294 -18 819 234 148 10 chr4 941240 941343 -201387004 - L1MEc LINE L1 -4506 1890 1720 621 269 72 46 chr4 941396 941566 -201386781 - L1MEc LINE L1 -5107 1289 1125 2192 104 0 0 chr4 941566 941855 -201386492 - AluSx SINE Alu -23 289 1 621 269 72 46 chr4 941855 942074 -201386273 - L1MEc LINE L1 -5271 1125 890 1503 268 84 37 chr4 942211 942305 -201386042 - L1MEc LINE L1 -5424 972 884 1572 131 0 4 chr4 942305 942534 -201385813 - AluSq SINE Alu -85 228 1 1503 268 84 37 chr4 942534 942744 -201385603 - L1MEc LINE L1 -5512 884 685 1641 181 7 0 chr4 942744 943032 -201385315 - AluJb SINE Alu -22 290 1 1503 268 84 37 chr4 943032 943428 -201384919 - L1MEc LINE L1 -5711 685 238 318 302 52 0 chr4 945971 946087 -201382260 + MLT1A1 LTR MaLR 19 140 -225 262 288 55 0 chr4 946919 947082 -201381265 + (GTGTG)n Simple_repeat Simple_repeat 5 176 0 396 0 0 0 chr4 948568 948612 -201379735 + (TG)n Simple_repeat Simple_repeat 1 44 0 261 0 0 0 chr4 948657 948686 -201379661 + (TG)n Simple_repeat Simple_repeat 2 30 0 279 0 0 0 chr4 948722 948753 -201379594 + (TG)n Simple_repeat Simple_repeat 2 32 0 186 43 0 0 chr4 948791 948814 -201379533 + (TG)n Simple_repeat Simple_repeat 2 24 0 260 89 0 22 chr4 948848 948893 -201379454 + (TG)n Simple_repeat Simple_repeat 1 44 0 1832 173 7 0 chr4 949767 950068 -201378279 - AluJb SINE Alu -4 308 6 2198 105 20 0 chr4 950072 950376 -201377971 - AluSg SINE Alu 0 310 1 997 227 95 36 chr4 950669 951061 -201377286 - L1M3 LINE L1 -465 5715 5285 477 193 0 11 chr4 951084 951172 -201377175 - AluSg/x SINE Alu -26 284 198 433 211 13 0 chr4 951171 951247 -201377100 - AluJo SINE Alu -151 161 85 * 890 73 0 0 chr4 951348 951458 -201376889 - AluSq/x SINE Alu -203 110 1 200 328 160 0 chr4 958276 958395 -201369952 + MIR SINE MIR 68 205 -57 206 322 0 0 chr4 961632 961722 -201366625 + C-rich Low_complexity Low_complexity 1 90 0 2411 50 3 10 chr4 963060 963358 -201364989 - AluY SINE Alu -15 296 1 229 282 91 9 chr4 963962 964072 -201364275 - L1MD1 LINE L1 -1 6241 6123 1870 152 50 19 chr4 968156 968519 -201359828 - THE1C LTR MaLR -1 374 1 1485 112 0 5 chr4 969344 969550 -201358797 - AluSg/x SINE Alu -21 291 87 361 83 0 0 chr4 971056 971104 -201357243 + THE1C LTR MaLR 1 48 -327 2376 111 42 11 chr4 971126 971479 -201356868 + THE1B LTR MaLR 1 364 0 273 358 57 0 chr4 972076 972199 -201356148 + Tigger8 DNA MER2_type 170 299 -367 258 181 96 12 chr4 972292 972375 -201355972 + Tigger8 DNA MER2_type 434 523 -143 786 239 84 47 chr4 976854 977067 -201351280 + MER58A DNA MER1_type 1 221 -3 2143 88 14 3 chr4 977179 977476 -201350871 + AluSp SINE Alu 1 300 -13 543 222 50 14 chr4 978775 978931 -201349416 + MER74A LTR ERVL 23 239 -383 263 258 82 21 chr4 979024 979121 -201349226 + MER74B LTR ERVL 512 614 -8 2307 77 10 16 chr4 979209 979521 -201348826 + AluSp SINE Alu 1 310 -3 301 261 91 0 chr4 980382 980470 -201347877 + L1M4 LINE L1 69 164 -6695 341 197 13 0 chr4 980540 980616 -201347731 + L1P LINE L1 3714 3790 -2356 466 285 100 43 chr4 981046 981499 -201346848 + L1M4 LINE L1 1282 1728 -5219 * 3734 215 23 85 chr4 981484 982730 -201345617 + L1M4 LINE L1 4410 5578 -1379 421 205 49 8 chr4 982700 982822 -201345525 + L1MC1 LINE L1 2003 2129 -4830 * 2104 95 54 0 chr4 982825 983121 -201345226 + AluSx SINE Alu 1 312 0 1011 150 24 0 chr4 983121 983288 -201345059 + AluJb SINE Alu 134 304 -8 324 249 89 35 chr4 983300 983469 -201344878 + L1MC1 LINE L1 2273 2450 -4688 413 295 59 56 chr4 983472 983811 -201344536 + L1MC1 LINE L1 2528 2867 -4271 862 164 96 82 chr4 983811 984030 -201344317 - MLT1A2 LTR MaLR 0 374 153 3012 199 38 9 chr4 984049 984706 -201343641 - L1MB3 LINE L1 -30 6153 5478 1389 150 86 29 chr4 984868 985148 -201343199 - AluJb SINE Alu -16 296 1 820 133 55 0 chr4 985148 985276 -201343071 - AluSq/x SINE Alu -178 135 1 863 157 21 0 chr4 985278 985418 -201342929 - FRAM SINE Alu -17 159 17 1731 188 65 82 chr4 985431 985486 -201342861 - L1MB3 LINE L1 -697 5474 5420 771 197 0 0 chr4 985486 985618 -201342729 - FLAM_A SINE Alu -1 132 1 1731 188 65 82 chr4 985618 985730 -201342617 - L1MB3 LINE L1 -751 5420 5308 1704 173 3 10 chr4 985730 986025 -201342322 - AluJb SINE Alu -17 295 3 1731 188 65 82 chr4 986025 986472 -201341875 - L1MB3 LINE L1 -863 5308 4873 553 163 206 0 chr4 986490 986631 -201341716 - MLT1A2 LTR MaLR -220 170 1 671 242 55 19 chr4 986643 986933 -201341414 + L1MC1 LINE L1 2835 3133 -3824 * 1147 246 55 25 chr4 986924 986979 -201341368 + L1MC1 LINE L1 5162 5214 -1743 2026 124 3 13 chr4 986979 987286 -201341061 + AluSx SINE Alu 1 304 -8 1147 246 55 25 chr4 987286 987664 -201340683 + L1MC1 LINE L1 5214 5608 -1349 300 340 123 0 chr4 987682 987844 -201340503 - L1MEc LINE L1 -4016 2201 2020 757 292 79 17 chr4 987878 988231 -201340116 - L1MEc LINE L1 -4432 1964 1590 651 270 77 123 chr4 988254 988322 -201340025 + L1MC4 LINE L1 6885 6955 -853 1976 143 0 10 chr4 988322 988622 -201339725 + AluSx SINE Alu 1 297 -15 651 270 77 123 chr4 988622 989334 -201339013 + L1MC4 LINE L1 6955 7629 -179 457 254 71 56 chr4 990140 990337 -201338010 + L1MC4 LINE L1 7841 8040 -2 30 27 0 0 chr4 990409 990446 -201337901 + AT_rich Low_complexity Low_complexity 1 37 0 27 49 0 0 chr4 990485 990526 -201337821 + AT_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr4 990565 990586 -201337761 + AT_rich Low_complexity Low_complexity 1 21 0 25 31 0 0 chr4 990633 990665 -201337682 + AT_rich Low_complexity Low_complexity 1 32 0 5873 143 45 22 chr4 990803 991980 -201336367 + L1MC1 LINE L1 5963 7144 0 195 346 28 60 chr4 993171 993353 -201334994 + L2 LINE L2 3133 3308 -5 191 267 67 0 chr4 994349 994424 -201333923 + L2 LINE L2 1705 1784 -1530 455 214 23 110 chr4 994600 994664 -201333683 + LTR37A LTR ERV1 260 328 -98 1961 178 103 0 chr4 994664 995052 -201333295 - MSTA LTR MaLR 0 428 1 455 214 23 110 chr4 995052 995079 -201333268 + LTR37A LTR ERV1 328 356 -70 1500 162 58 7 chr4 995079 995357 -201332990 - AluJo SINE Alu -20 292 1 455 214 23 110 chr4 995357 995437 -201332910 + LTR37A LTR ERV1 356 417 -9 888 193 119 30 chr4 996160 996362 -201331985 + MER58A DNA MER1_type 1 220 -4 1986 101 0 7 chr4 996365 996668 -201331679 + AluSg SINE Alu 23 310 0 920 123 0 0 chr4 996785 996915 -201331432 - FLAM_C SINE Alu 0 143 14 222 309 73 0 chr4 997479 997547 -201330800 + MIR SINE MIR 156 228 -34 417 281 10 0 chr4 999603 999699 -201328648 - MLT1K LTR MaLR -264 324 228 2528 196 38 108 chr4 999700 1000553 -201327794 - MER54B LTR ERVL 0 793 1 417 162 40 0 chr4 1000554 1000628 -201327719 - MLT1K LTR MaLR -358 230 154 759 235 0 47 chr4 1001365 1001535 -201326812 + FRAM SINE Alu 1 162 -4 208 139 0 28 chr4 1001538 1001574 -201326773 + (GGAAA)n Simple_repeat Simple_repeat 1 35 0 294 373 83 0 chr4 1002007 1002200 -201326147 + L2 LINE L2 3094 3302 -11 2111 86 18 0 chr4 1002756 1003071 -201325276 + AluSx SINE Alu 1 320 0 316 326 31 23 chr4 1003208 1003337 -201325010 + L1MEc LINE L1 1277 1406 -4990 2190 105 3 10 chr4 1003341 1003646 -201324701 - AluSp SINE Alu -10 303 1 350 228 13 0 chr4 1003696 1003775 -201324572 - MER58 DNA MER1_type -1 2419 2340 1915 142 13 3 chr4 1003843 1004146 -201324201 + AluJb SINE Alu 1 306 -6 441 225 6 66 chr4 1006000 1006243 -201322104 + G-rich Low_complexity Low_complexity 1 228 0 288 0 0 0 chr4 1006268 1006300 -201322047 + (TAA)n Simple_repeat Simple_repeat 3 34 0 621 105 175 18 chr4 1006346 1006460 -201321887 + FLAM_C SINE Alu 1 132 -1 342 265 11 54 chr4 1006579 1006764 -201321583 + G-rich Low_complexity Low_complexity 4 180 0 1908 124 90 37 chr4 1006923 1007277 -201321070 + THE1C LTR MaLR 1 373 -2 9807 132 24 40 chr4 1007281 1008885 -201319462 + THE1C-int LTR MaLR 3 1580 0 1906 131 81 36 chr4 1008885 1009244 -201319103 + THE1C LTR MaLR 1 375 0 201 304 25 13 chr4 1009248 1009327 -201319020 + (CGGGA)n Simple_repeat Simple_repeat 4 83 0 * 263 286 40 34 chr4 1009274 1009449 -201318898 + (GGATG)n Simple_repeat Simple_repeat 4 179 0 963 161 11 5 chr4 1012456 1012642 -201315705 - Charlie1 DNA MER1_type -4 2757 2571 393 235 49 49 chr4 1014138 1014321 -201314026 + L1ME3A LINE L1 5096 5278 -868 2204 71 0 4 chr4 1016592 1016859 -201311488 + AluY SINE Alu 1 266 -45 2238 100 0 17 chr4 1017067 1017368 -201310979 + AluSx SINE Alu 17 312 0 216 345 56 39 chr4 1017870 1018102 -201310245 + MIR SINE MIR 8 243 -19 471 350 90 8 chr4 1018429 1018695 -201309652 + L1MEc LINE L1 1529 1816 -4580 2084 133 7 3 chr4 1019667 1019968 -201308379 - AluSx SINE Alu -10 302 1 1078 267 39 27 chr4 1020353 1020497 -201307850 + L1MEc LINE L1 2685 2826 -3389 2947 92 54 7 chr4 1020497 1020921 -201307426 + MLT2A1 LTR ERVL 1 444 0 1078 267 39 27 chr4 1020921 1021188 -201307159 + L1MEc LINE L1 2826 3101 -3114 421 67 0 0 chr4 1021196 1021256 -201307091 + L1P3 LINE L1 5723 5782 -372 1156 37 0 15 chr4 1021260 1021394 -201306953 + AluYb8 SINE Alu 1 132 -186 1352 316 38 15 chr4 1021458 1022270 -201306077 + L1MEc LINE L1 3365 4195 -2020 1060 142 111 0 chr4 1022589 1022779 -201305568 - AluJb SINE Alu -22 290 80 1121 105 26 0 chr4 1022855 1023008 -201305339 - AluSg/x SINE Alu -19 291 135 506 209 147 0 chr4 1023009 1023186 -201305161 - Charlie5 DNA MER1_type -60 2552 2350 205 297 120 47 chr4 1024280 1024472 -201303875 + L2 LINE L2 2155 2360 -954 807 252 13 4 chr4 1024753 1024983 -201303364 + L1ME3A LINE L1 5624 5855 -315 1145 223 21 7 chr4 1024989 1025272 -201303075 + AluSx SINE Alu 26 312 0 371 277 8 54 chr4 1025756 1025993 -201302354 + C-rich Low_complexity Low_complexity 1 226 0 216 344 0 27 chr4 1026009 1026192 -201302155 + C-rich Low_complexity Low_complexity 1 178 0 185 0 0 39 chr4 1026228 1026254 -201302093 + (CCCCCT)n Simple_repeat Simple_repeat 1 25 0 346 190 235 23 chr4 1029732 1029910 -201298437 - MLT1J1 LTR MaLR -249 201 3 211 283 43 22 chr4 1030700 1030792 -201297555 - L2 LINE L2 -120 3193 3100 223 296 92 7 chr4 1031086 1031228 -201297119 - L2 LINE L2 -285 3028 2875 369 0 0 0 chr4 1031528 1031569 -201296778 + (CA)n Simple_repeat Simple_repeat 2 42 0 539 321 117 20 chr4 1031589 1031962 -201296385 + L1ME LINE L1 2676 3088 -3058 324 324 36 21 chr4 1032068 1032275 -201296072 + L1ME LINE L1 5564 5773 -348 2301 95 0 7 chr4 1032335 1032629 -201295718 - AluSc SINE Alu -17 292 1 2320 72 21 3 chr4 1032737 1033027 -201295320 - AluY SINE Alu -15 296 2 23 0 0 0 chr4 1033963 1033986 -201294361 + AT_rich Low_complexity Low_complexity 1 23 0 1824 154 3 14 chr4 1033986 1034279 -201294068 - AluJo SINE Alu -22 290 1 2218 128 0 0 chr4 1034289 1034586 -201293761 - AluSx SINE Alu -15 297 1 843 275 36 14 chr4 1035685 1035961 -201292386 - L3b LINE CR1 -200 1383 1102 367 246 95 8 chr4 1036322 1036448 -201291899 + L1ME LINE L1 5344 5480 -641 2684 146 116 30 chr4 1036481 1037287 -201291060 + L1MCa LINE L1 1203 2207 -4219 2070 106 34 20 chr4 1037287 1037579 -201290768 + AluSx SINE Alu 1 296 -16 2684 146 116 30 chr4 1037579 1037838 -201290509 + L1MCa LINE L1 2207 2442 -3984 6690 209 75 114 chr4 1037974 1038817 -201289530 + L1MCa LINE L1 2428 3303 -3123 986 210 46 1 chr4 1038817 1039118 -201289229 - MER2 DNA MER2_type 0 345 1 6690 209 75 114 chr4 1039118 1040763 -201287584 + L1MCa LINE L1 3303 5106 -1320 319 343 73 7 chr4 1041407 1041544 -201286803 - MIR SINE MIR -97 165 20 238 220 0 0 chr4 1041871 1041921 -201286426 + L2 LINE L2 3183 3232 -81 350 229 58 122 chr4 1042300 1042505 -201285842 + MIR SINE MIR 1 192 -70 203 351 22 30 chr4 1042583 1042717 -201285630 + L2 LINE L2 2622 2754 -560 297 280 13 70 chr4 1042821 1042978 -201285369 - MIR SINE MIR 0 262 115 * 564 209 104 86 chr4 1042973 1043092 -201285255 + MIR SINE MIR 35 161 -101 2157 128 3 0 chr4 1043092 1043388 -201284959 + AluSx SINE Alu 1 297 -15 564 209 104 86 chr4 1043388 1043488 -201284859 + MIR SINE MIR 161 258 -4 1373 191 93 31 chr4 1043531 1043855 -201284492 + MER2 DNA MER2_type 1 344 0 918 251 212 6 chr4 1043925 1044288 -201284059 - L2 LINE L2 -337 2977 2540 7541 29 13 0 chr4 1044299 1045369 -201282978 - L1PA4 LINE L1 0 6155 5082 343 269 185 0 chr4 1045376 1045484 -201282863 - MIR SINE MIR -108 154 27 750 293 98 32 chr4 1045842 1046160 -201282187 + L1MDa LINE L1 27 374 -6166 1651 167 25 117 chr4 1046160 1046632 -201281715 - MSTB1 LTR MaLR 0 432 4 750 293 98 32 chr4 1046632 1046682 -201281665 + L1MDa LINE L1 374 419 -6121 234 313 1 13 chr4 1046773 1046861 -201281486 + L1MDa LINE L1 778 865 -5665 2539 92 14 0 chr4 1046980 1047329 -201281018 + L1PB1 LINE L1 5794 6147 -4 1480 229 72 13 chr4 1047338 1047915 -201280432 + L1MDa LINE L1 2155 2650 -3890 1173 176 5 11 chr4 1047915 1048103 -201280244 + AluJo SINE Alu 1 187 -125 1000 253 68 3 chr4 1048211 1048547 -201279800 + L1MDa LINE L1 2761 3118 -3422 192 304 14 29 chr4 1048584 1048653 -201279694 + L2 LINE L2 1164 1231 -2083 200 289 19 58 chr4 1048679 1048783 -201279564 + L2 LINE L2 1298 1397 -1917 1137 230 157 3 chr4 1048805 1049148 -201279199 + MSTD LTR MaLR 1 396 0 280 242 0 102 chr4 1049357 1049485 -201278862 + L2 LINE L2 3198 3312 -1 425 331 64 0 chr4 1049870 1050027 -201278320 + MIR SINE MIR 73 239 -23 478 330 52 6 chr4 1050107 1050280 -201278067 - MIR SINE MIR -70 192 12 265 215 131 0 chr4 1050722 1050829 -201277518 - L1ME4a LINE L1 -171 5950 5830 409 254 224 15 chr4 1050965 1051166 -201277181 + MIR SINE MIR 9 251 -11 378 303 25 8 chr4 1051482 1051604 -201276743 - MER5B DNA MER1_type 0 178 55 1171 257 150 1 chr4 1051735 1052429 -201275918 - L1ME3A LINE L1 -48 6122 5318 982 156 11 5 chr4 1054593 1054779 -201273568 - Charlie1 DNA MER1_type -4 2757 2571 389 235 50 50 chr4 1056318 1056497 -201271850 + L1M4 LINE L1 5096 5274 -872 2192 75 0 4 chr4 1057474 1057741 -201270606 + AluY SINE Alu 1 266 -45 2238 102 0 16 chr4 1057947 1058251 -201270096 + AluSx SINE Alu 14 312 0 234 354 42 23 chr4 1058772 1058987 -201269360 + MIR SINE MIR 25 243 -19 228 297 121 11 chr4 1059345 1059527 -201268820 + L1MDa LINE L1 1886 2087 -4634 2194 129 0 3 chr4 1060553 1060862 -201267485 - AluSx SINE Alu -4 308 1 232 273 65 0 chr4 1061982 1062059 -201266288 + L1ME3A LINE L1 6051 6132 -38 416 270 94 56 chr4 1062091 1062413 -201265934 + L1MDa LINE L1 3235 3609 -2931 1177 244 4 8 chr4 1062413 1062651 -201265696 + MER8 DNA MER2_type 1 237 -2 416 270 94 56 chr4 1062651 1062664 -201265683 + L1MDa LINE L1 3609 3620 -2920 338 83 0 0 chr4 1062676 1062724 -201265623 + AluYb8 SINE Alu 84 131 -177 1576 55 0 0 chr4 1062756 1062938 -201265409 + AluY SINE Alu 33 214 -97 2255 176 117 4 chr4 1063058 1063552 -201264795 - L1MB4 LINE L1 -8 6172 5623 565 238 171 6 chr4 1063553 1063734 -201264613 + LTR16A1 LTR ERVL 247 457 0 2386 107 3 0 chr4 1064133 1064443 -201263904 + AluSx SINE Alu 1 311 -1 198 258 40 113 chr4 1064968 1065092 -201263255 - MIR SINE MIR -111 151 37 258 0 30 0 chr4 1065232 1065265 -201263082 + (TTTG)n Simple_repeat Simple_repeat 2 116 0 2174 119 0 3 chr4 1065265 1065547 -201262800 - AluSx SINE Alu -9 303 1 951 254 82 21 chr4 1065631 1066212 -201262135 - L1ME LINE L1 -3750 2465 1892 560 269 14 30 chr4 1066224 1066443 -201261904 - L1ME LINE L1 -4216 2000 1423 * 4541 171 22 30 chr4 1066430 1067012 -201261335 - L1MB1 LINE L1 -1 6167 5582 2019 105 84 3 chr4 1067012 1067297 -201261050 - AluSg1 SINE Alu -1 308 1 4541 171 22 30 chr4 1067297 1068120 -201260227 - L1MB1 LINE L1 -586 5582 4772 2002 126 22 41 chr4 1068120 1068438 -201259909 - AluSx SINE Alu 0 312 1 4541 171 22 30 chr4 1068438 1068486 -201259861 - L1MB1 LINE L1 -1396 4772 4725 6817 175 34 14 chr4 1068492 1069495 -201258852 + L1 LINE L1 3255 4299 -1847 2146 96 21 11 chr4 1069495 1069798 -201258549 + AluY SINE Alu 1 306 0 6817 175 34 14 chr4 1069798 1070260 -201258087 + L1 LINE L1 4299 4750 -1396 686 264 89 84 chr4 1070369 1071101 -201257246 - L1ME LINE L1 -4896 1321 684 286 301 11 23 chr4 1071337 1071513 -201256834 - L1ME LINE L1 -5607 598 425 619 153 51 0 chr4 1071691 1071809 -201256538 + MSTD LTR MaLR 273 396 0 470 301 164 14 chr4 1071809 1072101 -201256246 + L2 LINE L2 2315 2650 -664 252 296 58 64 chr4 1072360 1072532 -201255815 + L2 LINE L2 3142 3312 -1 249 325 44 26 chr4 1072700 1072814 -201255533 + L3 LINE CR1 332 447 -1130 187 250 0 0 chr4 1073137 1073181 -201255166 + L3 LINE CR1 410 453 -1124 342 188 75 25 chr4 1073344 1073424 -201254923 - L2 LINE L2 -37 3235 3152 337 294 59 13 chr4 1074095 1074248 -201254099 + L3 LINE CR1 1195 1354 -223 2239 112 3 32 chr4 1074497 1074810 -201253537 - AluSx SINE Alu -8 304 1 6002 222 82 70 chr4 1075104 1076736 -201251611 - MER52A LTR ERV1 0 1755 104 1056 203 121 4 chr4 1076798 1077054 -201251293 - MER52A LTR ERV1 -1469 286 1 470 261 85 71 chr4 1077383 1077594 -201250753 - MIR SINE MIR -21 241 28 198 0 0 0 chr4 1077922 1077944 -201250403 + (T)n Simple_repeat Simple_repeat 1 22 0 259 291 13 32 chr4 1079025 1079183 -201249164 + G-rich Low_complexity Low_complexity 3 157 0 * 297 222 16 60 chr4 1079095 1079366 -201248981 + (TGGG)n Simple_repeat Simple_repeat 1 259 0 199 337 36 0 chr4 1079426 1079509 -201248838 + MIR3 SINE MIR 114 199 -9 858 276 56 0 chr4 1080267 1080499 -201247848 + MIR SINE MIR 8 252 -10 429 308 19 30 chr4 1080688 1080951 -201247396 - L1MC5 LINE L1 -215 7746 7487 610 237 28 96 chr4 1081462 1081753 -201246594 - L1MC5 LINE L1 -844 7117 6847 413 304 55 55 chr4 1081802 1082019 -201246328 - L1MC4a LINE L1 -1137 6671 6455 14602 125 27 12 chr4 1082039 1083848 -201244499 - Tigger1 DNA MER2_type 0 2418 564 1838 144 34 27 chr4 1083848 1084140 -201244207 + AluJo SINE Alu 1 294 -18 14602 125 27 12 chr4 1084140 1084705 -201243642 - Tigger1 DNA MER2_type -1854 564 9 374 269 12 76 chr4 1084827 1084998 -201243349 - L1MC4a LINE L1 -1537 6271 6112 3171 227 111 48 chr4 1084998 1085846 -201242501 + L1MEc LINE L1 2179 2972 -3243 1606 145 0 9 chr4 1085846 1086074 -201242273 + AluSg/x SINE Alu 75 300 -12 3171 227 111 48 chr4 1086074 1086414 -201241933 + L1MEc LINE L1 2972 3289 -2926 1466 205 28 11 chr4 1086414 1086697 -201241650 + AluJb SINE Alu 1 288 -14 3171 227 111 48 chr4 1086697 1087036 -201241311 + L1MEc LINE L1 3289 3753 -2462 2223 98 16 16 chr4 1087129 1087434 -201240913 - AluSx SINE Alu -7 305 1 253 264 112 8 chr4 1087458 1087583 -201240764 - HAL1 LINE L1 -2280 227 90 587 275 104 40 chr4 1087633 1087943 -201240404 - L1MEd LINE L1 -4502 1627 1338 2523 68 6 6 chr4 1087943 1088254 -201240093 - AluY SINE Alu 0 311 1 587 275 104 40 chr4 1088254 1088834 -201239513 - L1MEd LINE L1 -4791 1338 692 35 41 0 0 chr4 1096278 1096327 -201232020 + GC_rich Low_complexity Low_complexity 1 49 0 21 0 0 0 chr4 1097687 1097708 -201230639 + GC_rich Low_complexity Low_complexity 1 21 0 515 96 48 10 chr4 1097921 1098025 -201230322 + C-rich Low_complexity Low_complexity 1 108 0 181 238 71 0 chr4 1098685 1098727 -201229620 + MER5B DNA MER1_type 7 51 -127 382 216 104 8 chr4 1098742 1098867 -201229480 + L1MC4a LINE L1 6124 6260 -1548 1451 220 20 41 chr4 1098935 1098987 -201229360 - Charlie1 DNA MER1_type -6 2755 2703 1678 114 35 98 chr4 1098987 1099286 -201229061 + AluJb SINE Alu 1 281 -31 2277 110 0 0 chr4 1099286 1099585 -201228762 + AluSx SINE Alu 14 312 0 1678 114 35 98 chr4 1099585 1099601 -201228746 + AluJb SINE Alu 281 296 -16 1451 220 20 41 chr4 1099601 1099939 -201228408 - Charlie1 DNA MER1_type -58 2703 2373 333 191 0 31 chr4 1101450 1101784 -201226563 + (TTCA)n Simple_repeat Simple_repeat 1 323 0 524 130 0 53 chr4 1101808 1101977 -201226370 + (TTCA)n Simple_repeat Simple_repeat 3 162 0 242 303 45 8 chr4 1103523 1103655 -201224692 + L2 LINE L2 2837 2973 -340 6095 224 61 20 chr4 1104548 1106545 -201221802 + L1M4 LINE L1 9 2096 -4550 11524 136 77 9 chr4 1106554 1108057 -201220290 + L1M4c LINE L1 20 1724 -4660 1979 90 115 4 chr4 1108057 1108335 -201220012 + AluSq SINE Alu 1 309 -4 11524 136 77 9 chr4 1108335 1109037 -201219310 + L1M4c LINE L1 1724 2376 -4008 532 181 0 0 chr4 1109037 1109131 -201219216 - AluJ/FRAM SINE Alu -3 309 216 2641 192 30 3 chr4 1109244 1109811 -201218536 + L1MB3 LINE L1 5586 6167 -16 458 298 31 31 chr4 1109828 1110120 -201218227 - L1M4c LINE L1 -4144 2240 1949 2064 113 26 29 chr4 1110195 1110506 -201217841 + AluSx SINE Alu 1 310 -2 334 257 44 53 chr4 1110528 1110734 -201217613 + L1M4 LINE L1 2514 2717 -3929 4151 227 63 49 chr4 1110754 1111650 -201216697 + L1M4 LINE L1 2771 3653 -2991 1863 130 72 10 chr4 1111650 1111942 -201216405 + AluJb SINE Alu 1 310 -2 4151 227 63 49 chr4 1111942 1111982 -201216365 + L1M4 LINE L1 3653 3691 -2953 2289 103 0 7 chr4 1111982 1112283 -201216064 + AluY SINE Alu 1 299 -12 4151 227 63 49 chr4 1112283 1112887 -201215460 + L1M4 LINE L1 3691 4334 -2310 3189 221 25 30 chr4 1112892 1113772 -201214575 + L1M4 LINE L1 4642 5517 -1127 284 292 109 22 chr4 1114333 1114470 -201213877 + MIR3 SINE MIR 18 166 -42 251 326 34 14 chr4 1115296 1115443 -201212904 + (CA)n Simple_repeat Simple_repeat 1 150 0 226 307 12 42 chr4 1115876 1116042 -201212305 + G-rich Low_complexity Low_complexity 3 163 0 26 50 0 0 chr4 1116366 1116406 -201211941 + AT_rich Low_complexity Low_complexity 1 40 0 1082 219 26 0 chr4 1117778 1118011 -201210336 - MLT1E2 LTR MaLR 0 626 388 236 242 15 15 chr4 1118022 1118088 -201210259 - MLT1E1 LTR MaLR -530 124 59 2307 150 20 60 chr4 1118109 1118555 -201209792 - MSTC LTR MaLR 0 428 1 284 278 14 0 chr4 1119166 1119238 -201209109 + L2 LINE L2 2553 2625 -689 223 186 0 29 chr4 1119251 1119321 -201209026 + (TA)n Simple_repeat Simple_repeat 1 68 0 414 234 32 60 chr4 1119327 1119575 -201208772 - L1ME LINE L1 -404 5717 5416 1071 205 4 39 chr4 1120670 1120904 -201207443 + AluJb SINE Alu 74 299 -13 7040 107 25 21 chr4 1120907 1122147 -201206200 - HSMAR2 DNA Mariner -55 1247 3 195 100 0 0 chr4 1122801 1122831 -201205516 + (A)n Simple_repeat Simple_repeat 1 30 0 477 271 26 42 chr4 1122890 1123082 -201205265 + MIR SINE MIR 30 218 -44 2266 131 50 77 chr4 1123812 1124256 -201204091 + MSTB1 LTR MaLR 1 432 0 259 252 93 0 chr4 1124812 1124919 -201203428 - L2 LINE L2 -1 3312 3196 1214 207 29 19 chr4 1125185 1125494 -201202853 + MLT1B LTR MaLR 79 390 0 654 251 55 42 chr4 1125535 1125842 -201202505 - LTR37A LTR ERV1 -111 315 5 281 275 0 11 chr4 1126752 1126843 -201201504 - MLT1F1 LTR MaLR 0 567 478 345 315 0 0 chr4 1127016 1127194 -201201153 + C-rich Low_complexity Low_complexity 1 178 0 970 150 23 6 chr4 1130369 1130542 -201197805 - AluJo SINE Alu -125 187 12 297 284 68 34 chr4 1130835 1130983 -201197364 + MIR3 SINE MIR 21 173 -35 969 356 87 73 chr4 1131895 1132384 -201195963 + L1M4 LINE L1 2734 3215 -2931 1917 158 10 3 chr4 1132384 1132694 -201195653 + AluSx SINE Alu 1 312 0 969 356 87 73 chr4 1132694 1133733 -201194614 + L1M4 LINE L1 3215 4288 -1858 2111 120 7 0 chr4 1133733 1134041 -201194306 + AluSq SINE Alu 1 310 -3 969 356 87 73 chr4 1134041 1134131 -201194216 + L1M4 LINE L1 4288 4375 -1771 267 289 160 5 chr4 1134660 1134816 -201193531 + MIR SINE MIR 10 187 -72 2311 77 0 3 chr4 1136203 1136500 -201191847 - AluY SINE Alu -15 296 1 895 206 12 6 chr4 1136553 1136723 -201191624 - L1MB7 LINE L1 -10 6174 6004 328 270 0 63 chr4 1136898 1137024 -201191323 - MSTB1 LTR MaLR -314 118 1 266 133 0 0 chr4 1137068 1137113 -201191234 - MLT2A2 LTR ERVL -2 451 407 594 266 132 20 chr4 1137125 1137537 -201190810 - MLT-int LTR MaLR -381 1354 841 680 199 15 0 chr4 1137721 1137857 -201190490 + MLT1A1 LTR MaLR 227 364 -1 1595 265 54 17 chr4 1137881 1138486 -201189861 - L1MB7 LINE L1 -187 5997 5335 2158 112 0 3 chr4 1138486 1138789 -201189558 - AluSx SINE Alu -10 302 1 1595 265 54 17 chr4 1138789 1138857 -201189490 - L1MB7 LINE L1 -849 5335 5271 216 291 25 0 chr4 1143453 1143532 -201184815 + (CA)n Simple_repeat Simple_repeat 1 81 0 219 256 166 25 chr4 1144778 1144977 -201183370 + L2 LINE L2 2355 2581 -733 201 39 0 0 chr4 1146483 1146509 -201181838 + (A)n Simple_repeat Simple_repeat 1 26 0 186 266 0 0 chr4 1149936 1150015 -201178332 + (CA)n Simple_repeat Simple_repeat 2 80 0 240 355 58 11 chr4 1152310 1152735 -201175612 + L1ME LINE L1 1267 1877 -4954 2199 74 0 0 chr4 1152754 1153038 -201175309 + AluSg SINE Alu 11 294 -16 489 240 58 90 chr4 1153358 1153670 -201174677 + L1ME LINE L1 2759 3035 -3906 1532 179 29 18 chr4 1153670 1153794 -201174553 + AluJo SINE Alu 1 122 -190 195 42 0 0 chr4 1153794 1153818 -201174529 + (TAA)n Simple_repeat Simple_repeat 2 25 0 1532 179 29 18 chr4 1153818 1153972 -201174375 + AluJo SINE Alu 122 282 -30 489 240 58 90 chr4 1153972 1154101 -201174246 + L1ME LINE L1 3035 3167 -3774 433 275 89 59 chr4 1154093 1154329 -201174018 + L1ME LINE L1 4803 5045 -1896 * 556 235 67 0 chr4 1154329 1154448 -201173899 - FLAM_C SINE Alu -16 127 1 242 287 35 0 chr4 1154458 1154545 -201173802 + L1ME LINE L1 5075 5164 -1777 2122 113 20 0 chr4 1154545 1154838 -201173509 + AluSx SINE Alu 1 299 -13 633 129 20 0 chr4 1154838 1154939 -201173408 + AluSg/x SINE Alu 208 310 0 419 278 93 5 chr4 1154939 1155133 -201173214 + L1ME LINE L1 5177 5387 -1554 641 297 154 22 chr4 1155135 1155674 -201172673 + L1ME LINE L1 5420 6029 -912 552 282 114 16 chr4 1155801 1156174 -201172173 + L1ME LINE L1 6164 6594 -363 225 154 0 0 chr4 1156480 1156519 -201171828 + GA-rich Low_complexity Low_complexity 2 40 0 218 205 0 0 chr4 1158428 1158467 -201169880 + (CA)n Simple_repeat Simple_repeat 1 39 0 194 302 35 0 chr4 1158473 1158559 -201169788 + L2 LINE L2 3155 3243 -29 218 204 10 92 chr4 1158929 1159125 -201169222 + (TG)n Simple_repeat Simple_repeat 1 180 0 252 288 16 38 chr4 1161885 1162069 -201166278 + (TG)n Simple_repeat Simple_repeat 1 180 0 601 231 109 7 chr4 1166676 1166823 -201161524 - AluJb SINE Alu -10 302 141 23 0 0 0 chr4 1166897 1166920 -201161427 + AT_rich Low_complexity Low_complexity 1 23 0 2127 130 0 0 chr4 1166929 1167228 -201161119 - AluSx SINE Alu -9 303 5 432 315 46 5 chr4 1168438 1168654 -201159693 - MLT1J LTR MaLR -16 495 271 470 359 53 18 chr4 1169606 1169946 -201158401 - L1MD2 LINE L1 -444 5915 5564 308 236 101 0 chr4 1178565 1178654 -201149693 + L1MC3 LINE L1 7685 7782 -3 250 264 60 36 chr4 1180163 1180330 -201148017 + (CAGGG)n Simple_repeat Simple_repeat 4 174 0 252 245 40 20 chr4 1183378 1183529 -201144818 + (CG)n Simple_repeat Simple_repeat 1 154 0 246 184 37 59 chr4 1183611 1183747 -201144600 + (CCGCG)n Simple_repeat Simple_repeat 4 136 0 23 0 0 0 chr4 1183758 1183781 -201144566 + GC_rich Low_complexity Low_complexity 1 23 0 180 0 0 0 chr4 1183865 1183885 -201144462 + (CGGGG)n Simple_repeat Simple_repeat 2 21 0 2212 116 0 3 chr4 1186728 1187030 -201141317 - AluSq SINE Alu -12 301 1 2091 155 112 4 chr4 1187124 1187589 -201140758 - L1MA8 LINE L1 -6 6285 5771 199 400 22 0 chr4 1187631 1187721 -201140626 + MIR SINE MIR 97 188 -74 1319 227 96 14 chr4 1187877 1188243 -201140104 - MSTD LTR MaLR 0 396 1 824 285 112 75 chr4 1188339 1188780 -201139567 + L1MEd LINE L1 332 756 -5660 935 120 0 0 chr4 1188780 1188905 -201139442 - FLAM_C SINE Alu -8 125 1 824 285 112 75 chr4 1188905 1189620 -201138727 + L1MEd LINE L1 756 1530 -4886 321 353 78 41 chr4 1189642 1189860 -201138487 + L1MEd LINE L1 1407 1632 -4794 704 244 73 23 chr4 1189867 1190145 -201138202 - MLT1E LTR MaLR -2 591 235 6056 211 92 56 chr4 1190371 1190803 -201137544 - L1MB3 LINE L1 -7 6176 5761 2627 100 28 17 chr4 1190803 1191163 -201137184 + THE1B LTR MaLR 1 364 0 6056 211 92 56 chr4 1191163 1191419 -201136928 - L1MB3 LINE L1 -422 5761 5516 192 97 0 0 chr4 1191419 1191450 -201136897 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 6056 211 92 56 chr4 1191450 1191500 -201136847 - L1MB3 LINE L1 -667 5516 5469 1467 172 36 20 chr4 1191500 1191687 -201136660 - AluJo SINE Alu 0 312 117 225 0 0 0 chr4 1191687 1191712 -201136635 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 1467 172 36 20 chr4 1191712 1191827 -201136520 - AluJo SINE Alu -195 117 5 6056 211 92 56 chr4 1191827 1193437 -201134910 - L1MB3 LINE L1 -714 5469 3919 1705 164 42 0 chr4 1193437 1193723 -201134624 - AluJb SINE Alu -14 298 1 6056 211 92 56 chr4 1193723 1193739 -201134608 - L1MB3 LINE L1 -2264 3919 3905 1928 151 10 10 chr4 1193739 1194050 -201134297 - AluJo SINE Alu -1 311 1 6056 211 92 56 chr4 1194050 1195118 -201133229 - L1MB3 LINE L1 -2278 3905 2614 191 373 20 59 chr4 1195432 1195636 -201132711 - MIR SINE MIR -34 228 33 2015 226 28 67 chr4 1196642 1197067 -201131280 - L1MC/D LINE L1 -466 5776 5336 1907 178 36 0 chr4 1197067 1197399 -201130948 + MER2 DNA MER2_type 1 344 0 2015 226 28 67 chr4 1197399 1198093 -201130254 - L1MC/D LINE L1 -906 5336 4617 2122 104 0 4 chr4 1198093 1198407 -201129940 - AluSc SINE Alu 0 313 1 1791 171 0 16 chr4 1198407 1198712 -201129635 - AluJo SINE Alu -12 300 1 2015 226 28 67 chr4 1198712 1198789 -201129558 - L1MC/D LINE L1 -1534 4708 4630 2330 103 0 0 chr4 1198795 1199097 -201129250 - AluSq SINE Alu -11 302 1 1065 210 186 35 chr4 1199111 1199234 -201129113 + LTR54B LTR ERV1 1 104 -394 1582 176 29 0 chr4 1199234 1199532 -201128815 + AluJo SINE Alu 1 306 0 1065 210 186 35 chr4 1199532 1199807 -201128540 + LTR54B LTR ERV1 104 472 -26 624 151 123 0 chr4 1199807 1199913 -201128434 + FLAM_A SINE Alu 1 119 -14 1065 210 186 35 chr4 1199913 1199941 -201128406 + LTR54B LTR ERV1 472 494 -4 1621 181 7 11 chr4 1200670 1200957 -201127390 + AluJo SINE Alu 1 286 -26 5867 219 32 56 chr4 1201524 1202071 -201126276 - L1M4 LINE L1 -1449 4933 4374 7283 94 27 17 chr4 1202071 1203068 -201125279 - LTR13 LTR ERVK 0 1007 1 5867 219 32 56 chr4 1203068 1203183 -201125164 - L1M4 LINE L1 -2008 4374 4258 225 0 0 0 chr4 1203183 1203208 -201125139 + (TG)n Simple_repeat Simple_repeat 2 26 0 2210 80 0 7 chr4 1203208 1203495 -201124852 - AluSp SINE Alu -28 285 1 1581 191 3 16 chr4 1203498 1203801 -201124546 - AluJb SINE Alu -13 299 1 5867 219 32 56 chr4 1203801 1204662 -201123685 - L1M4 LINE L1 -2125 4257 3377 1640 143 108 7 chr4 1204662 1204941 -201123406 - AluJb SINE Alu -5 307 1 5867 219 32 56 chr4 1204941 1205124 -201123223 - L1M4 LINE L1 -3005 3377 3191 3400 56 2 43 chr4 1205124 1205526 -201122821 - L1PA8 LINE L1 -2 6170 5788 2403 79 0 13 chr4 1205526 1205841 -201122506 - AluY SINE Alu 0 311 1 3400 56 2 43 chr4 1205841 1205905 -201122442 - L1PA8 LINE L1 -384 5788 5723 5867 219 32 56 chr4 1205905 1206180 -201122167 - L1M4 LINE L1 -3191 3191 2997 2951 92 57 7 chr4 1206180 1206603 -201121744 - MLT2A1 LTR ERVL 0 444 1 5867 219 32 56 chr4 1206603 1206746 -201121601 - L1M4 LINE L1 -3385 2997 2852 1732 221 79 16 chr4 1207562 1208588 -201119759 - L1M4 LINE L1 -3473 2909 1723 * 2388 229 33 24 chr4 1208584 1208606 -201119741 + L1MB4 LINE L1 4685 4705 -1475 2265 83 7 3 chr4 1208606 1208907 -201119440 + AluY SINE Alu 1 302 -9 2388 229 33 24 chr4 1208907 1209511 -201118836 + L1MB4 LINE L1 4705 5337 -843 2162 93 35 0 chr4 1209511 1209801 -201118546 - AluSx SINE Alu -12 300 1 2388 229 33 24 chr4 1209801 1210291 -201118056 + L1MB4 LINE L1 5337 5821 -359 420 286 11 6 chr4 1210289 1210464 -201117883 + L1M4 LINE L1 2695 2870 -3276 * 1663 209 32 0 chr4 1210470 1210814 -201117533 + L1MB4 LINE L1 5826 6180 0 2036 256 72 1 chr4 1210992 1211889 -201116458 - L1MB5 LINE L1 -133 6041 5080 248 303 0 34 chr4 1211940 1212118 -201116229 + (CCGCT)n Simple_repeat Simple_repeat 2 173 0 * 297 179 0 77 chr4 1212040 1212443 -201115904 + CT-rich Low_complexity Low_complexity 1 372 0 262 276 10 20 chr4 1212853 1212951 -201115396 + L1M4c LINE L1 1233 1329 -5055 2768 43 0 20 chr4 1212951 1213302 -201115045 + L1PA5 LINE L1 5811 6154 0 1142 123 0 0 chr4 1213359 1213514 -201114833 + AluSx SINE Alu 1 155 -157 756 264 81 4 chr4 1213522 1213757 -201114590 + MER45B DNA AcHobo 244 496 -544 949 143 0 0 chr4 1213761 1213901 -201114446 + AluSx SINE Alu 148 287 -23 1532 296 77 0 chr4 1213955 1214539 -201113808 + MER45B DNA AcHobo 206 834 -206 303 151 43 158 chr4 1214540 1214566 -201113781 + MER45B DNA AcHobo 777 804 -777 2202 96 3 6 chr4 1214566 1214878 -201113469 + AluY SINE Alu 1 311 0 303 151 43 158 chr4 1214878 1214990 -201113357 + MER45B DNA AcHobo 804 899 -141 2010 89 37 0 chr4 1214994 1215113 -201113234 + AluSc SINE Alu 1 114 -203 188 0 74 0 chr4 1215113 1215140 -201113207 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 2010 89 37 0 chr4 1215140 1215327 -201113020 + AluSc SINE Alu 114 317 0 638 121 0 0 chr4 1215333 1215424 -201112923 + AluSg/x SINE Alu 210 300 -12 1236 161 28 117 chr4 1215435 1215863 -201112484 + L1M1 LINE L1 5178 5579 -724 477 49 99 0 chr4 1216842 1216923 -201111424 + L1M1 LINE L1 5574 5662 -641 1498 140 0 9 chr4 1217207 1217450 -201110897 + AluJb SINE Alu 64 304 0 370 273 28 103 chr4 1218048 1218301 -201110046 + MER21B LTR ERV1 13 246 -617 686 263 64 11 chr4 1218387 1218704 -201109643 + MER21B LTR ERV1 466 806 -125 557 112 0 78 chr4 1218736 1218852 -201109495 + MER4D LTR ERV1 1 107 -796 3220 187 103 72 chr4 1219007 1219712 -201108635 - LTR28 LTR ERV1 -69 951 209 2436 68 0 7 chr4 1219712 1220019 -201108328 + AluY SINE Alu 1 305 -6 3220 187 103 72 chr4 1220019 1220235 -201108112 - LTR28 LTR ERV1 -811 209 1 * 3834 119 37 78 chr4 1220235 1220591 -201107756 + MER4D LTR ERV1 103 472 -400 2248 86 16 3 chr4 1220591 1220895 -201107452 - AluSc SINE Alu -1 308 1 3834 119 37 78 chr4 1220895 1221341 -201107006 + MER4D LTR ERV1 472 872 0 518 268 131 13 chr4 1221644 1221915 -201106432 + L1ME3 LINE L1 5862 6164 0 224 352 138 19 chr4 1223822 1224032 -201104315 + MIR SINE MIR 2 236 -26 674 178 23 23 chr4 1224143 1224272 -201104075 - AluJb SINE Alu -180 132 4 545 165 189 43 chr4 1225516 1225680 -201102667 - MER20 DNA MER1_type -31 188 1 1758 93 4 8 chr4 1225863 1226110 -201102237 - AluSx SINE Alu -3 309 64 1012 167 6 0 chr4 1226220 1226388 -201101959 + AluJb SINE Alu 133 301 -11 208 349 64 9 chr4 1226659 1226768 -201101579 + L3b LINE CR1 1271 1385 -198 248 137 20 0 chr4 1227768 1227819 -201100528 + G-rich Low_complexity Low_complexity 2 53 0 183 355 153 16 chr4 1228357 1228540 -201099807 + L2 LINE L2 1166 1373 -1941 1287 111 0 0 chr4 1228672 1229030 -201099317 + (G)n Simple_repeat Simple_repeat 1 359 0 184 261 68 57 chr4 1231530 1231618 -201096729 + L2 LINE L2 1891 1979 -1335 22 0 0 0 chr4 1232009 1232031 -201096316 + GC_rich Low_complexity Low_complexity 1 22 0 506 239 163 38 chr4 1234366 1234575 -201093772 - MER58 DNA MER1_type -2182 238 4 639 254 0 8 chr4 1235843 1235977 -201092370 + FLAM_A SINE Alu 2 134 -8 1092 128 6 28 chr4 1236085 1236264 -201092083 - AluSg/x SINE Alu -3 309 135 2190 103 3 0 chr4 1236264 1236556 -201091791 - AluY SINE Alu -18 293 1 2484 60 0 13 chr4 1236566 1236881 -201091466 - AluY SINE Alu 0 311 1 1358 214 30 4 chr4 1237857 1238128 -201090219 + AluJo SINE Alu 1 278 -34 194 307 227 56 chr4 1241024 1241610 -201086737 + L2 LINE L2 1796 2481 -833 258 353 88 20 chr4 1241911 1242115 -201086232 + L2 LINE L2 3092 3309 -4 212 330 113 0 chr4 1242559 1242665 -201085682 + L2 LINE L2 1461 1578 -1736 209 326 111 35 chr4 1242857 1243029 -201085318 + L2 LINE L2 1829 2013 -1301 793 308 101 38 chr4 1243034 1243226 -201085121 + L2 LINE L2 2127 2305 -1009 1543 190 11 0 chr4 1243226 1243536 -201084811 - AluJo SINE Alu 0 313 1 793 308 101 38 chr4 1243536 1243845 -201084502 + L2 LINE L2 2305 2661 -653 225 336 99 0 chr4 1243966 1244097 -201084250 + L2 LINE L2 2886 3029 -284 211 289 214 27 chr4 1244110 1244297 -201084050 + L2 LINE L2 2998 3219 -94 23 0 0 0 chr4 1244327 1244350 -201083997 + AT_rich Low_complexity Low_complexity 1 23 0 926 324 140 20 chr4 1245002 1245765 -201082582 + Charlie7 DNA MER1_type 371 1225 -1387 846 226 32 16 chr4 1245901 1246087 -201082260 + AluJo SINE Alu 123 311 -1 1285 234 72 37 chr4 1246189 1246647 -201081700 + L1MB7 LINE L1 3454 3927 -2219 434 163 0 12 chr4 1246647 1246727 -201081620 + MLT1A2 LTR MaLR 296 374 0 1665 236 168 27 chr4 1246737 1246838 -201081509 + L1MB7 LINE L1 5213 5298 -886 2203 68 3 20 chr4 1246838 1247134 -201081213 - AluY SINE Alu -20 291 1 1665 236 168 27 chr4 1247134 1247461 -201080886 + L1MB7 LINE L1 5298 5578 -606 2021 97 7 52 chr4 1247461 1247769 -201080578 + AluSc SINE Alu 1 294 -15 1665 236 168 27 chr4 1247769 1248165 -201080182 + L1MB7 LINE L1 5578 6184 0 195 167 28 28 chr4 1248249 1248321 -201080026 + (CAGGG)n Simple_repeat Simple_repeat 4 75 0 565 196 36 29 chr4 1248507 1248645 -201079702 + MER33 DNA MER1_type 27 165 -159 801 188 0 7 chr4 1248645 1248789 -201079558 - FLAM_C SINE Alu 0 143 1 2187 85 7 3 chr4 1248800 1249094 -201079253 - AluY SINE Alu -16 295 1 450 172 117 14 chr4 1249102 1249247 -201079100 + MER33 DNA MER1_type 157 316 -8 339 217 24 12 chr4 1249561 1249644 -201078703 - MER20 DNA MER1_type -135 84 1 311 274 263 5 chr4 1249733 1249919 -201078428 - L1ME LINE L1 -348 5818 5585 269 254 0 0 chr4 1250071 1250130 -201078217 + (CGTG)n Simple_repeat Simple_repeat 1 59 0 908 279 75 53 chr4 1250131 1250582 -201077765 - MLT2B1 LTR ERVL -58 462 2 316 227 31 0 chr4 1250591 1250688 -201077659 - L1ME LINE L1 -728 5436 5337 1162 176 0 10 chr4 1250688 1250887 -201077460 + AluSg/x SINE Alu 105 301 -11 1309 290 77 6 chr4 1250911 1251445 -201076902 - L1ME LINE L1 -850 5296 4725 1200 233 40 20 chr4 1251481 1251883 -201076464 - L1MB2 LINE L1 -1 6182 5787 1504 230 101 7 chr4 1251894 1252350 -201075997 - MLT2B2 LTR ERVL -15 500 2 1582 220 51 3 chr4 1252361 1252693 -201075654 - MER7A DNA MER2_type 0 346 1 411 236 126 8 chr4 1252693 1252809 -201075538 - L1MB2 LINE L1 -387 5784 5650 293 263 42 34 chr4 1252946 1253064 -201075283 - L1MB2 LINE L1 -706 5477 5359 227 120 250 10 chr4 1253165 1253265 -201075082 - L1MB2 LINE L1 -920 5226 5103 260 272 0 12 chr4 1253528 1253609 -201074738 - HAL1 LINE L1 -847 1660 1581 2177 108 7 3 chr4 1256745 1257050 -201071297 - AluSx SINE Alu -6 306 1 438 326 97 81 chr4 1257491 1257770 -201070577 + L1MEd LINE L1 561 834 -1664 1665 137 32 11 chr4 1257770 1258054 -201070293 + AluJo SINE Alu 1 290 -22 438 326 97 81 chr4 1258054 1258117 -201070230 + L1MEd LINE L1 834 895 -1603 1606 143 37 0 chr4 1258117 1258362 -201069985 + AluJb SINE Alu 35 288 -24 2063 90 35 7 chr4 1258368 1258658 -201069689 + AluSx SINE Alu 1 298 -14 438 326 97 81 chr4 1258658 1259175 -201069172 + L1MEd LINE L1 899 1523 -975 364 267 30 0 chr4 1259219 1259320 -201069027 - MER3 DNA MER1_type -76 133 30 487 301 65 38 chr4 1259327 1259513 -201068834 + L1MEd LINE L1 2320 2510 -3619 394 230 34 34 chr4 1261216 1261394 -201066953 + (CCCCAG)n Simple_repeat Simple_repeat 1 178 0 * 449 254 0 28 chr4 1261280 1261461 -201066886 + C-rich Low_complexity Low_complexity 4 179 0 1571 179 3 7 chr4 1263229 1263525 -201064822 + AluJo SINE Alu 1 295 -17 731 175 0 32 chr4 1263786 1263912 -201064435 + FRAM SINE Alu 38 159 -17 417 306 82 100 chr4 1263985 1264978 -201063369 + L1M4c LINE L1 800 1209 -1566 2282 81 0 0 chr4 1264978 1265275 -201063072 + AluY SINE Alu 1 297 -14 417 306 82 100 chr4 1265275 1265702 -201062645 + L1M4c LINE L1 1209 1642 -1133 2223 93 27 0 chr4 1267096 1267397 -201060950 - AluSc SINE Alu 0 309 1 23 110 0 0 chr4 1269143 1269243 -201059104 + GC_rich Low_complexity Low_complexity 1 100 0 1936 67 4 0 chr4 1274753 1274993 -201053354 - AluSg SINE Alu -69 241 1 1485 184 52 10 chr4 1276806 1277094 -201051253 + AluJo SINE Alu 1 300 -12 1802 159 3 20 chr4 1277425 1277726 -201050621 + AluJo SINE Alu 1 296 -16 209 269 60 18 chr4 1279327 1279494 -201048853 + (TCTCTG)n Simple_repeat Simple_repeat 4 177 0 235 294 49 12 chr4 1280281 1280444 -201047903 + (CGGGG)n Simple_repeat Simple_repeat 2 170 0 227 264 55 22 chr4 1282734 1282825 -201045522 - L1ME LINE L1 -450 5712 5619 1913 259 63 23 chr4 1282972 1283343 -201045004 - L1ME2 LINE L1 -8 6225 5870 2054 93 0 0 chr4 1283343 1283602 -201044745 - AluSc SINE Alu -50 259 1 1913 259 63 23 chr4 1283602 1283955 -201044392 - L1ME2 LINE L1 -363 5870 5472 1456 281 52 38 chr4 1284067 1284696 -201043651 - L1ME2 LINE L1 -942 5273 4631 1525 219 84 30 chr4 1284696 1285065 -201043282 - MLT1B LTR MaLR -1 389 1 1456 281 52 38 chr4 1285065 1285142 -201043205 - L1ME2 LINE L1 -1584 4631 4557 1843 88 0 4 chr4 1285170 1285408 -201042939 + AluSg SINE Alu 55 291 -19 710 274 81 27 chr4 1285410 1285819 -201042528 - L1ME2 LINE L1 -4603 1793 1363 2212 120 0 0 chr4 1285878 1286179 -201042168 + AluSx SINE Alu 1 301 -11 367 291 195 42 chr4 1286229 1286562 -201041785 - L2 LINE L2 -7 3306 2923 798 291 112 3 chr4 1286613 1286953 -201041394 - L2 LINE L2 -518 2796 2420 2163 79 0 0 chr4 1286981 1287258 -201041089 + AluSx SINE Alu 14 290 -22 259 396 7 21 chr4 1292327 1292471 -201035876 - MIR SINE MIR -20 242 101 25 0 0 0 chr4 1293828 1293853 -201034494 + AT_rich Low_complexity Low_complexity 1 25 0 437 215 47 0 chr4 1296823 1296930 -201031417 - LTR45 LTR ERV1 0 525 414 359 262 12 0 chr4 1296944 1297028 -201031319 - LTR45 LTR ERV1 -440 85 1 183 156 0 0 chr4 1301942 1301974 -201026373 + (TG)n Simple_repeat Simple_repeat 1 32 0 342 264 23 0 chr4 1302330 1302417 -201025930 - MER58A DNA MER1_type -18 89 1 315 0 0 0 chr4 1302940 1302975 -201025372 + (TG)n Simple_repeat Simple_repeat 2 36 0 1958 140 90 29 chr4 1303174 1303517 -201024830 - THE1B LTR MaLR 0 364 1 264 329 25 6 chr4 1303761 1303919 -201024428 - L1M4 LINE L1 -3772 2374 2214 318 398 59 5 chr4 1304685 1304871 -201023476 - HAL1 LINE L1 -838 1669 1474 2288 65 45 17 chr4 1304872 1305224 -201023123 - MLT2A1 LTR ERVL -69 375 14 755 280 0 11 chr4 1306745 1306934 -201021413 + MER5A DNA MER1_type 1 187 -2 1003 185 17 0 chr4 1306967 1307145 -201021202 + AluSg/x SINE Alu 130 310 0 199 330 11 34 chr4 1307466 1307554 -201020793 - MIR SINE MIR -157 105 20 506 157 24 0 chr4 1307655 1307738 -201020609 - AluJ/FRAM SINE Alu -8 304 220 300 424 8 4 chr4 1308641 1308884 -201019463 + MIR SINE MIR 8 251 -11 742 174 134 40 chr4 1309059 1309260 -201019087 + L1M4 LINE L1 5402 5621 -563 20407 32 18 0 chr4 1509269 1512380 -200815967 - L1PA4 LINE L1 -246 5909 2746 399 284 11 16 chr4 1512381 1512564 -200815783 + L1MEc LINE L1 2040 2221 -4175 5876 181 40 17 chr4 1512712 1513585 -200814762 - L1MC3 LINE L1 -13 7772 6860 243 0 0 0 chr4 1513585 1513612 -200814735 + (TG)n Simple_repeat Simple_repeat 1 27 0 5876 181 40 17 chr4 1513612 1513994 -200814353 - L1MC3 LINE L1 -925 6860 6488 22 0 0 0 chr4 1514053 1514075 -200814272 + AT_rich Low_complexity Low_complexity 1 22 0 1767 143 3 21 chr4 1514110 1514396 -200813951 - AluJb SINE Alu -31 281 1 419 266 32 19 chr4 1514560 1514714 -200813633 + L1M4 LINE L1 5 160 -6382 701 168 8 46 chr4 1514722 1514853 -200813494 + FLAM_C SINE Alu 5 130 -3 2172 83 0 3 chr4 1514880 1515181 -200813166 + AluY SINE Alu 1 300 -11 252 0 0 0 chr4 1516012 1516040 -200812307 + (TG)n Simple_repeat Simple_repeat 1 28 0 * 498 17 0 0 chr4 1516039 1516098 -200812249 + (GA)n Simple_repeat Simple_repeat 1 59 0 808 170 0 19 chr4 1517313 1517472 -200810875 - FAM SINE Alu -14 171 16 184 266 186 18 chr4 1517866 1517979 -200810368 + L2 LINE L2 3138 3269 -3 187 209 70 0 chr4 1518071 1518114 -200810233 - MIR SINE MIR -77 131 86 1380 199 21 7 chr4 1518431 1518718 -200809629 - AluJo SINE Alu -21 291 1 1630 152 8 0 chr4 1518733 1518996 -200809351 - AluJb SINE Alu -4 308 44 2223 67 7 24 chr4 1519080 1519378 -200808969 + AluY SINE Alu 1 293 -18 2181 85 3 3 chr4 1519393 1519686 -200808661 + AluY SINE Alu 1 293 -18 1572 175 11 3 chr4 1519873 1520158 -200808189 + AluJo SINE Alu 6 292 -20 2053 107 0 3 chr4 1520323 1520612 -200807735 + AluSx SINE Alu 11 298 -14 410 283 88 5 chr4 1521120 1521325 -200807022 + L2 LINE L2 2849 3070 -243 593 219 16 23 chr4 1521378 1521506 -200806841 + FRAM SINE Alu 42 168 -8 1765 111 16 82 chr4 1521529 1521681 -200806666 - AluSx SINE Alu -26 286 162 270 0 0 0 chr4 1521681 1521711 -200806636 + (TA)n Simple_repeat Simple_repeat 2 31 0 1765 111 16 82 chr4 1521711 1521864 -200806483 - AluSx SINE Alu -150 162 1 280 294 0 59 chr4 1521978 1522080 -200806267 + L2 LINE L2 3204 3299 -14 2349 46 0 3 chr4 1522663 1522975 -200805372 - AluY SINE Alu 0 311 1 315 0 0 0 chr4 1523281 1523316 -200805031 + (TG)n Simple_repeat Simple_repeat 2 36 0 321 317 58 10 chr4 1523696 1523800 -200804547 - MIR SINE MIR -133 129 21 822 229 132 50 chr4 1524049 1524533 -200803814 + L1MC5 LINE L1 7276 7799 -162 1045 153 9 65 chr4 1524621 1524711 -200803636 - AluJb SINE Alu -99 213 120 2261 75 0 10 chr4 1524711 1525019 -200803328 - AluY SINE Alu -6 305 1 1045 153 9 65 chr4 1525019 1525143 -200803204 - AluJb SINE Alu -192 120 11 379 232 97 53 chr4 1525636 1525839 -200802508 + MLT1I LTR MaLR 40 233 -176 2206 59 3 7 chr4 1525839 1526151 -200802196 + AluY SINE Alu 1 311 0 379 232 97 53 chr4 1526151 1526206 -200802141 + MLT1I LTR MaLR 233 284 -125 847 185 62 0 chr4 1526206 1526384 -200801963 + MER5A DNA MER1_type 1 189 0 379 232 97 53 chr4 1526384 1526404 -200801943 + MLT1I LTR MaLR 284 407 -2 218 318 38 51 chr4 1526404 1526640 -200801707 - L2 LINE L2 -681 2633 2401 309 276 103 62 chr4 1526728 1526806 -200801541 + L2 LINE L2 3014 3087 -185 2138 116 3 0 chr4 1526806 1527108 -200801239 + AluSx SINE Alu 1 303 -9 309 276 103 62 chr4 1527108 1527272 -200801075 + L2 LINE L2 3087 3266 -6 1703 164 0 4 chr4 1527573 1527848 -200800499 - AluJb SINE Alu -30 282 9 2095 118 0 0 chr4 1527855 1528151 -200800196 - AluSg SINE Alu -14 296 1 2319 80 3 6 chr4 1528286 1528597 -200799750 + AluSp SINE Alu 1 310 -3 254 216 87 101 chr4 1529635 1529659 -200798688 - HAL1 LINE L1 -117 2390 2367 1811 182 0 0 chr4 1529659 1529966 -200798381 - AluSx SINE Alu -5 307 1 254 216 87 101 chr4 1529966 1530009 -200798338 - HAL1 LINE L1 -140 2367 2325 2051 87 0 30 chr4 1530009 1530307 -200798040 + AluSc SINE Alu 1 289 -20 254 216 87 101 chr4 1530307 1530446 -200797901 - HAL1 LINE L1 -182 2325 2186 491 240 24 32 chr4 1530472 1530719 -200797628 - MLT1G1 LTR MaLR -30 565 241 420 239 42 19 chr4 1530806 1530928 -200797419 - MLT1G1 LTR MaLR -357 192 25 856 190 17 34 chr4 1530936 1531115 -200797232 - AluJo SINE Alu -10 302 127 731 246 168 73 chr4 1531155 1531590 -200796757 - HAL1 LINE L1 -358 2149 1757 2235 85 10 3 chr4 1531590 1531896 -200796451 + AluSx SINE Alu 1 308 -4 731 246 168 73 chr4 1531896 1532010 -200796337 - HAL1 LINE L1 -750 1757 1655 2092 105 6 13 chr4 1532010 1532324 -200796023 - AluSx SINE Alu 0 312 1 731 246 168 73 chr4 1532324 1532351 -200795996 - HAL1 LINE L1 -852 1655 1517 2195 91 7 0 chr4 1532360 1532656 -200795691 - AluSx SINE Alu -14 298 1 1678 154 14 3 chr4 1532667 1532952 -200795395 - AluJo SINE Alu -24 288 1 1930 106 10 26 chr4 1532962 1533264 -200795083 - AluSq SINE Alu -16 297 1 2216 160 67 13 chr4 1533281 1533743 -200794604 - L1MB7 LINE L1 -19 6165 5679 2509 48 0 10 chr4 1533744 1534058 -200794289 - AluY SINE Alu 0 311 1 2103 91 17 0 chr4 1534067 1534354 -200793993 - AluSq SINE Alu -21 292 1 1801 172 0 0 chr4 1534354 1534651 -200793696 - AluJb SINE Alu -15 297 1 2325 73 0 16 chr4 1535030 1535344 -200793003 + AluY SINE Alu 3 311 0 848 87 7 58 chr4 1535606 1535744 -200792603 - FLAM_C SINE Alu -2 131 1 2024 88 10 20 chr4 1536031 1536325 -200792022 - AluSg SINE Alu -19 291 1 1850 117 16 26 chr4 1536642 1536949 -200791398 + AluSx SINE Alu 1 304 -8 1635 167 27 3 chr4 1536987 1537286 -200791061 - AluJb SINE Alu -6 306 1 1287 181 7 86 chr4 1537393 1537696 -200790651 - AluJo SINE Alu -31 281 3 239 276 90 26 chr4 1537698 1537854 -200790493 - HAL1 LINE L1 -1067 1440 1275 1633 144 91 0 chr4 1537857 1538142 -200790205 + AluJb SINE Alu 1 311 -1 197 179 0 26 chr4 1538185 1538224 -200790123 + L2 LINE L2 3186 3223 -90 2531 162 59 10 chr4 1538230 1538723 -200789624 - L1MB3 LINE L1 -20 6163 5647 344 185 86 12 chr4 1538741 1538822 -200789525 + L2 LINE L2 3226 3312 -1 355 259 74 12 chr4 1538840 1539002 -200789345 - L1MEd LINE L1 -5033 1339 1168 384 246 127 21 chr4 1539461 1539603 -200788744 - MIR SINE MIR -92 170 14 1424 184 41 4 chr4 1539837 1540108 -200788239 - AluJo SINE Alu -31 281 1 551 166 14 35 chr4 1540152 1540297 -200788050 + CT-rich Low_complexity Low_complexity 4 145 0 1841 133 17 13 chr4 1540332 1540632 -200787715 + AluJb SINE Alu 3 303 -9 1547 168 13 36 chr4 1540640 1540944 -200787403 + AluJb SINE Alu 1 297 -15 540 196 107 0 chr4 1540951 1541063 -200787284 + AluJo/FLAM SINE Alu 2 125 -187 1915 135 26 0 chr4 1541063 1541367 -200786980 - AluSx SINE Alu 0 312 1 406 213 138 50 chr4 1541367 1541527 -200786820 - L1MEd LINE L1 -5002 1382 1209 1581 153 19 0 chr4 1541530 1541791 -200786556 - AluJo SINE Alu -10 302 37 2366 59 13 0 chr4 1541823 1542126 -200786221 + AluY SINE Alu 1 307 -4 571 234 194 6 chr4 1542141 1542316 -200786031 - L1MEd LINE L1 -5570 802 595 546 228 32 6 chr4 1542330 1542488 -200785859 - L1MEd LINE L1 -5878 494 333 689 273 48 0 chr4 1542723 1542932 -200785415 - MER20 DNA MER1_type 0 219 1 221 249 205 7 chr4 1543481 1543608 -200784739 + MIR SINE MIR 33 167 -41 203 303 50 50 chr4 1544911 1545030 -200783317 - MIR SINE MIR -141 121 3 207 0 0 0 chr4 1545665 1545688 -200782659 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1473 176 11 8 chr4 1545697 1545964 -200782383 - AluJo SINE Alu -44 268 1 422 190 0 0 chr4 1546054 1546133 -200782214 - FLAM_A SINE Alu -18 124 46 1309 114 21 0 chr4 1546333 1546526 -200781821 + AluJo SINE Alu 1 197 -115 268 358 0 0 chr4 1546593 1546660 -200781687 - MIR3 SINE MIR -49 159 93 242 254 185 28 chr4 1546815 1546921 -200781426 - MIR SINE MIR -67 141 14 2454 60 0 0 chr4 1547173 1547474 -200780873 - AluY SINE Alu -10 301 1 2296 77 3 0 chr4 1548289 1548587 -200779760 + AluSq SINE Alu 1 299 -14 1722 162 3 7 chr4 1549685 1549975 -200778372 - AluJb SINE Alu -18 294 6 2235 111 0 0 chr4 1550095 1550402 -200777945 - AluSx SINE Alu -5 307 1 318 301 154 7 chr4 1550492 1550628 -200777719 + MIR SINE MIR 14 169 -93 1997 114 41 0 chr4 1551057 1551347 -200777000 - AluSc SINE Alu -7 302 1 828 187 0 53 chr4 1552215 1552386 -200775961 - FRAM SINE Alu -12 164 3 1213 206 4 47 chr4 1552539 1552815 -200775532 - L1MC4 LINE L1 -1033 7009 6746 2158 110 0 0 chr4 1553080 1553379 -200774968 - AluSg SINE Alu -10 300 2 24 0 0 0 chr4 1553384 1553408 -200774939 + AT_rich Low_complexity Low_complexity 1 24 0 227 147 44 73 chr4 1553459 1553527 -200774820 - L1ME3A LINE L1 -3 6167 6102 1417 115 14 0 chr4 1553675 1553884 -200774463 - AluSg/x SINE Alu -18 294 83 369 207 30 30 chr4 1554147 1554282 -200774065 - L1M4 LINE L1 -3546 2600 2466 2117 125 0 0 chr4 1554747 1555059 -200773288 + AluSx SINE Alu 1 312 0 754 245 129 134 chr4 1555566 1556341 -200772006 - HAL1 LINE L1 -36 2471 1693 6803 111 19 23 chr4 1556341 1557352 -200770995 + LTR13 LTR ERVK 1 1007 0 754 245 129 134 chr4 1557352 1557470 -200770877 - HAL1 LINE L1 -814 1693 1576 1874 153 0 0 chr4 1557470 1557764 -200770583 - AluSx SINE Alu -18 294 1 754 245 129 134 chr4 1557764 1557777 -200770570 - HAL1 LINE L1 -931 1576 1564 1944 124 7 3 chr4 1557777 1558067 -200770280 - AluSx SINE Alu -21 291 1 754 245 129 134 chr4 1558067 1558545 -200769802 - HAL1 LINE L1 -943 1564 1047 2341 81 3 0 chr4 1558545 1558855 -200769492 - AluY SINE Alu 0 311 1 754 245 129 134 chr4 1558855 1559260 -200769087 - HAL1 LINE L1 -1460 1047 641 220 233 29 17 chr4 1559604 1559680 -200768667 - MIR SINE MIR -125 83 6 2023 146 13 0 chr4 1559765 1560083 -200768264 - AluJb SINE Alu 0 322 1 232 265 0 0 chr4 1560714 1560763 -200767584 + (CATATA)n Simple_repeat Simple_repeat 2 50 0 2143 126 0 16 chr4 1560862 1561172 -200767175 - AluSq SINE Alu -2 311 7 1775 166 7 7 chr4 1561221 1561510 -200766837 - AluSx SINE Alu -11 301 13 1877 115 28 90 chr4 1562307 1562630 -200765717 + AluJb SINE Alu 1 303 -9 2226 113 3 13 chr4 1563093 1563394 -200764953 + AluSg SINE Alu 1 298 -12 1834 129 27 0 chr4 1563609 1563865 -200764482 + AluSq SINE Alu 1 263 -50 261 136 0 0 chr4 1563936 1563980 -200764367 + L1 LINE L1 3892 3935 -2211 811 169 0 8 chr4 1564063 1564193 -200764154 + FRAM SINE Alu 34 162 -14 1846 162 14 27 chr4 1564193 1564490 -200763857 + AluJo SINE Alu 1 293 -19 249 266 194 35 chr4 1564501 1564617 -200763730 + L1ME LINE L1 3947 4043 -2103 2232 111 3 3 chr4 1564617 1564915 -200763432 + AluSx SINE Alu 1 298 -14 249 266 194 35 chr4 1564915 1564941 -200763406 + L1ME LINE L1 4043 4064 -2082 2065 160 0 0 chr4 1564941 1565248 -200763099 + AluSx SINE Alu 1 307 -5 249 266 194 35 chr4 1565248 1565308 -200763039 + L1ME LINE L1 4064 4113 -2033 2052 135 7 0 chr4 1565308 1565596 -200762751 + AluSx SINE Alu 1 290 -22 249 266 194 35 chr4 1565596 1565873 -200762474 + L1ME LINE L1 4113 4503 -1643 2183 136 0 0 chr4 1566085 1566380 -200761967 + AluSx SINE Alu 1 295 -17 370 300 25 31 chr4 1566536 1566648 -200761699 + L1ME LINE L1 5047 5159 -987 719 142 63 16 chr4 1566648 1566775 -200761572 + FLAM_C SINE Alu 1 133 0 370 300 25 31 chr4 1566775 1566822 -200761525 + L1ME LINE L1 5159 5205 -941 334 295 50 77 chr4 1566875 1567173 -200761174 + L1ME LINE L1 5371 5660 -502 588 146 0 11 chr4 1567535 1567624 -200760723 + FLAM SINE Alu 44 131 -12 1675 161 9 54 chr4 1568070 1568386 -200759961 + AluJb SINE Alu 1 302 -10 2390 109 0 0 chr4 1568827 1569139 -200759208 - AluSx SINE Alu 0 312 1 1907 158 0 3 chr4 1569215 1569543 -200758804 - AluJo SINE Alu 0 327 1 2438 80 3 0 chr4 1569591 1569891 -200758456 - AluSg SINE Alu -7 303 3 2206 128 0 0 chr4 1569902 1570206 -200758141 - AluSx SINE Alu -3 309 6 2117 195 92 22 chr4 1570315 1570818 -200757529 - MLT1F LTR MaLR -1 541 4 2295 105 7 7 chr4 1570882 1571188 -200757159 + AluSx SINE Alu 7 312 0 1357 204 9 61 chr4 1571315 1571643 -200756704 - AluJo SINE Alu -1 311 1 346 345 35 71 chr4 1571679 1571934 -200756413 - MIR SINE MIR -16 246 1 209 336 114 0 chr4 1572798 1572929 -200755418 - MIR SINE MIR -65 197 52 572 255 40 0 chr4 1572981 1573130 -200755217 - MER58 DNA MER1_type -66 275 121 340 294 110 0 chr4 1573223 1573369 -200754978 + MER5B DNA MER1_type 3 164 -14 354 237 214 8 chr4 1573378 1573509 -200754838 - MER5A DNA MER1_type -9 180 23 21 0 0 0 chr4 1574956 1574977 -200753370 + AT_rich Low_complexity Low_complexity 1 21 0 2340 95 0 7 chr4 1575599 1575903 -200752444 + AluSx SINE Alu 3 304 -8 2296 79 3 26 chr4 1575907 1576211 -200752136 + AluSp SINE Alu 1 297 -16 2324 60 0 30 chr4 1576836 1577138 -200751209 - AluY SINE Alu -18 293 1 2444 100 3 0 chr4 1577520 1577829 -200750518 - AluSp SINE Alu -3 310 1 639 152 0 0 chr4 1577861 1577960 -200750387 + AluSp/q SINE Alu 207 305 -8 24 67 0 0 chr4 1577967 1578012 -200750335 + AT_rich Low_complexity Low_complexity 1 45 0 2564 71 0 3 chr4 1578012 1578318 -200750029 + AluSg SINE Alu 1 306 0 315 0 0 0 chr4 1578318 1578353 -200749994 + (TA)n Simple_repeat Simple_repeat 2 36 0 2319 112 0 3 chr4 1579021 1579325 -200749022 + AluSx SINE Alu 1 303 -9 2464 86 10 0 chr4 1579832 1580133 -200748214 + AluSx SINE Alu 1 304 -8 2317 101 0 7 chr4 1580499 1580797 -200747550 - AluSx SINE Alu -16 296 1 225 328 0 0 chr4 1581041 1581099 -200747248 - MIR SINE MIR -1 261 204 570 148 0 0 chr4 1581784 1581885 -200746462 + (T)n Simple_repeat Simple_repeat 1 101 0 678 279 79 3 chr4 1582666 1582956 -200745391 + L1MC5 LINE L1 7604 7915 -46 203 241 56 19 chr4 1586762 1586816 -200741531 + MIR SINE MIR 172 227 -35 21 0 0 0 chr4 1589375 1589396 -200738951 + AT_rich Low_complexity Low_complexity 1 21 0 2022 112 0 25 chr4 1589693 1590011 -200738336 - AluSg SINE Alu 0 312 2 2393 86 0 10 chr4 1592923 1593225 -200735122 + AluSg SINE Alu 1 299 -11 504 0 0 0 chr4 1594887 1594943 -200733404 + (CA)n Simple_repeat Simple_repeat 1 56 0 1418 110 11 126 chr4 1597212 1597406 -200730941 - AluJb SINE Alu -11 301 143 2223 111 3 7 chr4 1597406 1597703 -200730644 - AluSx SINE Alu -16 296 1 1418 110 11 126 chr4 1597703 1597771 -200730576 - AluJb SINE Alu -169 143 69 1719 160 45 17 chr4 1597786 1598073 -200730274 - AluJb SINE Alu -17 295 1 728 194 194 0 chr4 1598196 1598376 -200729971 + MER20 DNA MER1_type 1 215 -4 2228 109 0 13 chr4 1600693 1601006 -200727341 - AluSx SINE Alu -3 309 1 549 242 52 47 chr4 1602094 1602305 -200726042 - L1ME LINE L1 -414 5707 5496 1707 194 7 0 chr4 1603278 1603577 -200724770 - AluJo SINE Alu -11 301 1 552 290 149 28 chr4 1605645 1606080 -200722267 + L1MC4 LINE L1 7546 8033 -9 1032 166 22 28 chr4 1606088 1606269 -200722078 - AluJo SINE Alu -7 305 126 227 362 108 14 chr4 1606686 1606965 -200721382 + L1MEd LINE L1 653 957 -5573 339 365 53 53 chr4 1606997 1607150 -200721197 + L1MEd LINE L1 945 1097 -5433 1615 160 64 11 chr4 1607150 1607432 -200720915 + AluJo SINE Alu 1 297 -15 339 365 53 53 chr4 1607432 1607634 -200720713 + L1MEd LINE L1 1096 1300 -5230 5209 144 56 53 chr4 1607692 1609029 -200719318 + L1M4c LINE L1 18 1349 -5035 1703 173 52 25 chr4 1609029 1609394 -200718953 - THE1C LTR MaLR 0 375 1 5209 144 56 53 chr4 1609394 1609802 -200718545 + L1M4c LINE L1 1349 1888 -4496 2482 77 0 3 chr4 1609802 1610101 -200718246 + AluY SINE Alu 1 298 -13 5209 144 56 53 chr4 1610101 1610372 -200717975 + L1M4c LINE L1 1888 2157 -4227 1159 232 6 12 chr4 1610391 1610719 -200717628 + L1M4c LINE L1 3415 3740 -2642 2431 88 0 0 chr4 1610725 1611020 -200717327 + AluSg SINE Alu 1 295 -15 296 160 0 20 chr4 1611020 1611070 -200717277 + Tigger5 DNA MER2_type 2261 2309 -14 1087 166 104 104 chr4 1611072 1611427 -200716920 - LOR1a LTR ERV1 0 497 143 338 295 139 45 chr4 1611881 1612125 -200716222 + L1MEd LINE L1 2307 2573 -3967 1611 176 20 33 chr4 1612845 1613151 -200715196 + AluJo SINE Alu 1 302 -10 211 229 0 0 chr4 1613446 1613494 -200714853 + GA-rich Low_complexity Low_complexity 1 48 0 880 85 0 23 chr4 1614503 1614632 -200713715 + FLAM_C SINE Alu 1 126 -7 377 234 181 27 chr4 1615163 1615351 -200712996 + L1M4c LINE L1 4028 4244 -2138 2075 110 31 3 chr4 1616281 1616571 -200711776 - AluSx SINE Alu -14 298 1 2410 81 0 10 chr4 1617642 1617940 -200710407 - AluSq SINE Alu -18 295 1 734 277 142 3 chr4 1619076 1619379 -200708968 - MLT1C LTR MaLR -106 361 17 2320 89 3 49 chr4 1620920 1621247 -200707100 + AluSx SINE Alu 1 312 0 2166 122 0 3 chr4 1621270 1621566 -200706781 + AluSx SINE Alu 1 295 -17 21 0 0 0 chr4 1626555 1626576 -200701771 + AT_rich Low_complexity Low_complexity 1 21 0 203 217 17 0 chr4 1629059 1629119 -200699228 + (CATA)n Simple_repeat Simple_repeat 3 63 0 2373 99 0 0 chr4 1632383 1632685 -200695662 - AluSq SINE Alu -11 302 1 1665 138 94 7 chr4 1632770 1633045 -200695302 - AluJb SINE Alu -13 299 1 1857 164 7 0 chr4 1634245 1634538 -200693809 - AluJo SINE Alu -17 295 1 251 282 9 73 chr4 1634597 1634707 -200693640 - L2 LINE L2 -9 3304 3202 2207 108 13 0 chr4 1636743 1637050 -200691297 + AluSp SINE Alu 3 313 0 586 154 27 31 chr4 1637073 1637205 -200691142 - MLT1A1 LTR MaLR -38 429 197 1029 102 12 30 chr4 1637239 1637406 -200690941 - AluSg/x SINE Alu -12 300 137 1007 161 0 12 chr4 1637561 1637723 -200690624 + FRAM SINE Alu 1 160 -16 2146 127 7 0 chr4 1637725 1638017 -200690330 + AluSx SINE Alu 1 294 -18 2448 79 20 0 chr4 1638017 1638321 -200690026 + AluY SINE Alu 1 311 0 1030 223 122 62 chr4 1638396 1638781 -200689566 + MLT2B1 LTR ERVL 7 414 0 501 278 57 20 chr4 1639077 1639322 -200689025 + L1ME3A LINE L1 2315 2568 -3578 402 172 247 21 chr4 1639348 1639441 -200688906 + FLAM_A SINE Alu 14 127 -6 724 283 141 21 chr4 1639441 1640059 -200688288 + L1ME3A LINE L1 2592 3283 -2863 1796 162 0 33 chr4 1640105 1640408 -200687939 + AluSx SINE Alu 13 305 -7 840 220 18 6 chr4 1640409 1640577 -200687770 + AluJo/FRAM SINE Alu 135 304 -8 684 296 52 17 chr4 1640590 1640935 -200687412 + L1ME3A LINE L1 3484 3840 -2306 719 179 64 0 chr4 1641010 1641166 -200687181 + L1MB8 LINE L1 5450 5615 -559 * 24912 132 25 20 chr4 1641158 1641526 -200686821 + L1PA8A LINE L1 862 1227 -5219 267 114 0 0 chr4 1641526 1641570 -200686777 + (CAA)n Simple_repeat Simple_repeat 2 45 0 24912 132 25 20 chr4 1641570 1643885 -200684462 + L1PA8A LINE L1 1227 3529 -2917 186 43 0 0 chr4 1643885 1643908 -200684439 + (TAA)n Simple_repeat Simple_repeat 2 24 0 24912 132 25 20 chr4 1643908 1645068 -200683279 + L1PA8A LINE L1 3529 4682 -1764 2479 77 0 0 chr4 1645068 1645367 -200682980 + AluSx SINE Alu 1 299 -13 2615 68 0 0 chr4 1645367 1645676 -200682671 + AluY SINE Alu 1 309 -2 24912 132 25 20 chr4 1645676 1647318 -200681029 + L1PA8A LINE L1 4682 6440 -6 2352 95 0 25 chr4 1647318 1647635 -200680712 + AluSc SINE Alu 1 309 0 1235 204 49 3 chr4 1647639 1647924 -200680423 + L1MB8 LINE L1 5860 6157 -21 * 1999 167 0 0 chr4 1647942 1648235 -200680112 - AluJb SINE Alu -19 293 1 2346 74 7 10 chr4 1648257 1648555 -200679792 - AluY SINE Alu -14 297 1 482 294 184 57 chr4 1648611 1648911 -200679436 + L1ME3A LINE L1 3975 4235 -1911 1773 113 0 4 chr4 1648911 1649176 -200679171 + AluSx SINE Alu 56 312 0 482 294 184 57 chr4 1649176 1649934 -200678413 + L1ME3A LINE L1 4235 5216 -930 1658 178 14 10 chr4 1649934 1650226 -200678121 + AluJo SINE Alu 1 293 -19 482 294 184 57 chr4 1650226 1650406 -200677941 + L1ME3A LINE L1 5216 5372 -774 665 168 0 0 chr4 1650408 1650515 -200677832 + AluSq/x SINE Alu 2 108 -205 883 167 20 0 chr4 1650515 1650665 -200677682 + AluJb SINE Alu 157 309 -3 256 268 138 65 chr4 1650684 1650975 -200677372 + L1ME3A LINE L1 5609 5920 -250 218 318 6 47 chr4 1651932 1652102 -200676245 + G-rich Low_complexity Low_complexity 5 167 0 233 267 151 0 chr4 1653123 1653209 -200675138 - MER63D DNA MER1_type -9 1053 955 565 171 23 31 chr4 1653234 1653363 -200674984 - FLAM_C SINE Alu -4 129 2 1005 228 53 42 chr4 1653507 1653814 -200674533 - MER63D DNA MER1_type -313 748 435 2382 60 3 17 chr4 1653814 1654116 -200674231 + AluSp SINE Alu 1 298 -15 1005 228 53 42 chr4 1654116 1654185 -200674162 - MER63D DNA MER1_type -626 435 368 482 178 22 0 chr4 1654243 1654333 -200674014 + L1MC/D LINE L1 5656 5747 -495 375 258 54 41 chr4 1654513 1654602 -200673745 + L1ME LINE L1 5258 5344 -826 1495 125 5 0 chr4 1654602 1654818 -200673529 + AluSg/x SINE Alu 84 300 -10 375 258 54 41 chr4 1654818 1654949 -200673398 + L1ME LINE L1 5344 5481 -689 1154 184 95 45 chr4 1655017 1655177 -200673170 - L1M4 LINE L1 -1318 4828 4678 2059 154 7 0 chr4 1655177 1655482 -200672865 - AluSx SINE Alu -5 307 1 1154 184 95 45 chr4 1655482 1655658 -200672689 - L1M4 LINE L1 -1468 4678 4475 1309 133 30 10 chr4 1655662 1655865 -200672482 + AluJo SINE Alu 14 220 -92 251 204 0 0 chr4 1655865 1655914 -200672433 + FLAM_A SINE Alu 85 133 0 880 249 58 19 chr4 1655922 1656231 -200672116 - L1M4 LINE L1 -1659 4487 4167 2325 90 0 3 chr4 1656260 1656548 -200671799 + AluSq SINE Alu 1 287 -26 1644 82 0 0 chr4 1656548 1656744 -200671603 + AluSq SINE Alu 79 274 -39 317 194 39 29 chr4 1656773 1656876 -200671471 - L1M4 LINE L1 -1494 4652 4549 1152 154 0 0 chr4 1656959 1657121 -200671226 - AluJb SINE Alu -17 295 134 1466 161 93 7 chr4 1657121 1657254 -200671093 - AluSx SINE Alu -8 304 184 1590 114 18 0 chr4 1657254 1657473 -200670874 - AluSx SINE Alu -89 223 1 1466 161 93 7 chr4 1657473 1657619 -200670728 - AluSx SINE Alu -128 184 1 1208 181 185 8 chr4 1657621 1657880 -200670467 - AluJo SINE Alu -7 305 1 535 366 103 6 chr4 1657899 1658238 -200670109 - L1M4 LINE L1 -1712 4434 4063 549 135 0 11 chr4 1658249 1658338 -200670009 - FLAM_A SINE Alu -16 126 39 262 325 32 37 chr4 1658405 1658651 -200669696 - L1M4 LINE L1 -2125 4021 3777 1276 204 78 20 chr4 1658651 1658999 -200669348 - MER96B DNA MER1_type? 0 417 50 317 221 70 12 chr4 1659032 1659118 -200669229 + MER96B DNA MER1_type? 327 417 0 330 314 26 39 chr4 1659124 1659239 -200669108 - L1M4 LINE L1 -2387 3759 3645 2381 76 0 13 chr4 1659239 1659540 -200668807 - AluY SINE Alu -14 297 1 330 314 26 39 chr4 1659540 1659580 -200668767 - L1M4 LINE L1 -2501 3645 3606 431 281 38 111 chr4 1659738 1659939 -200668408 - L1ME LINE L1 -5708 362 187 2206 125 0 0 chr4 1659939 1660228 -200668119 + AluSx SINE Alu 9 297 -15 431 281 38 111 chr4 1660228 1660314 -200668033 - L1ME LINE L1 -5883 187 96 774 236 38 64 chr4 1660366 1660381 -200667966 - L1M4 LINE L1 -2103 4043 4029 2399 84 0 3 chr4 1660381 1660690 -200667657 - AluY SINE Alu -3 308 1 774 236 38 64 chr4 1660690 1661017 -200667330 - L1M4 LINE L1 -2117 4029 3710 2360 106 0 6 chr4 1661197 1661508 -200666839 + AluSc SINE Alu 1 309 0 335 274 138 68 chr4 1661651 1661903 -200666444 + MER110 LTR ERV1 97 359 -109 1789 145 0 0 chr4 1661911 1662173 -200666174 + AluJo SINE Alu 34 295 -17 2785 29 0 3 chr4 1662837 1663149 -200665198 + AluY SINE Alu 1 311 0 583 229 8 0 chr4 1663286 1663417 -200664930 - FLAM_A SINE Alu -1 132 1 693 187 29 0 chr4 1663600 1663771 -200664576 + CT-rich Low_complexity Low_complexity 4 179 0 2363 84 17 0 chr4 1663807 1664149 -200664198 - AluY SINE Alu 0 347 1 2090 122 3 0 chr4 1664317 1664604 -200663743 - AluSx SINE Alu -14 298 11 346 161 18 0 chr4 1664621 1664677 -200663670 - L1MB7 LINE L1 0 6184 6128 1719 190 16 44 chr4 1664677 1664755 -200663592 + L1 LINE L1 4124 4203 -1943 4144 183 31 55 chr4 1664755 1665748 -200662599 + LTR5 LTR ERVK 1 969 0 1719 190 16 44 chr4 1665748 1665874 -200662473 + L1 LINE L1 4203 4331 -1815 2039 95 95 0 chr4 1665874 1666147 -200662200 - AluSc SINE Alu -10 299 1 1719 190 16 44 chr4 1666147 1666393 -200661954 + L1 LINE L1 4331 4562 -1584 305 211 0 0 chr4 1666394 1666451 -200661896 + AluS SINE Alu 1 57 -243 1799 204 19 12 chr4 1666451 1666873 -200661474 + L1P LINE L1 4852 5276 -870 10241 125 8 30 chr4 1666873 1668521 -200659826 - PRIMA41-int LTR ERV1 -179 6497 4886 1557 165 4 0 chr4 1668521 1668770 -200659577 + MER52A LTR ERV1 1506 1755 0 6887 135 26 16 chr4 1668781 1669919 -200658428 - THE1-int LTR MaLR 0 1580 431 13571 122 12 10 chr4 1669919 1672578 -200655769 - L1PA10 LINE L1 0 6483 3809 2320 100 0 0 chr4 1672578 1672868 -200655479 - AluSq SINE Alu -23 290 1 13571 122 12 10 chr4 1672868 1673270 -200655077 - L1PA10 LINE L1 -2674 3809 3410 1203 112 0 0 chr4 1673272 1673451 -200654896 + L1P LINE L1 4411 4589 -1557 * 10885 184 10 44 chr4 1673448 1674078 -200654269 - L1PA10 LINE L1 -3051 3410 2760 2324 89 0 4 chr4 1674078 1674402 -200653945 + AluSc SINE Alu 2 324 0 10885 184 10 44 chr4 1674402 1675045 -200653302 - L1PA10 LINE L1 -3701 2760 2097 2262 106 0 20 chr4 1675045 1675348 -200652999 - AluSg SINE Alu -13 297 1 10885 184 10 44 chr4 1675348 1675376 -200652971 - L1PA10 LINE L1 -4364 2097 2070 1407 103 198 12 chr4 1675376 1675628 -200652719 + AluSc SINE Alu 1 299 0 10885 184 10 44 chr4 1675628 1676546 -200651801 - L1PA10 LINE L1 -4391 2070 1303 2424 77 10 19 chr4 1676546 1676859 -200651488 - AluSg SINE Alu 0 310 1 10885 184 10 44 chr4 1676859 1677453 -200650894 - L1PA10 LINE L1 -5158 1303 690 1473 151 0 18 chr4 1677482 1677700 -200650647 - AluSg SINE Alu -96 214 1 2299 316 45 73 chr4 1677814 1678758 -200649589 - PRIMA41-int LTR ERV1 -2753 5003 4125 2684 55 0 0 chr4 1678758 1679067 -200649280 - AluY SINE Alu -2 309 1 2299 316 45 73 chr4 1679067 1679778 -200648569 - PRIMA41-int LTR ERV1 -3631 4125 3395 448 335 50 19 chr4 1679931 1680250 -200648097 + ERVL LTR ERVL 3656 3984 -1780 1585 138 161 15 chr4 1680343 1680684 -200647663 + MSTA LTR MaLR 1 391 -37 652 164 9 0 chr4 1680685 1680801 -200647546 - FLAM_C SINE Alu -16 117 1 334 222 56 32 chr4 1680801 1680927 -200647420 + L1M4 LINE L1 2869 2997 -3149 709 183 89 0 chr4 1680980 1681193 -200647154 + LOR1-int LTR ERV1 2275 2506 -2365 257 294 61 66 chr4 1681352 1681645 -200646702 - L1M4 LINE L1 -3136 3010 2717 396 0 0 0 chr4 1681645 1681689 -200646658 + (TA)n Simple_repeat Simple_repeat 1 44 0 1591 170 71 32 chr4 1681698 1681980 -200646367 - AluJo SINE Alu -19 293 1 257 294 61 66 chr4 1681980 1682234 -200646113 - L1M4 LINE L1 -3437 2709 2456 712 194 55 103 chr4 1682509 1682535 -200645812 + LOR1-int LTR ERV1 1522 1548 -6572 2329 120 0 0 chr4 1682535 1682843 -200645504 + AluSx SINE Alu 1 308 -4 712 194 55 103 chr4 1682843 1682956 -200645391 + LOR1-int LTR ERV1 1548 1665 -6455 2095 116 3 20 chr4 1682956 1683250 -200645097 + AluSx SINE Alu 1 289 -23 712 194 55 103 chr4 1683250 1683507 -200644840 + LOR1-int LTR ERV1 1665 1900 -6220 2194 80 0 0 chr4 1683522 1683785 -200644562 - AluSx SINE Alu -24 288 26 30 0 0 0 chr4 1685679 1685709 -200642638 + GC_rich Low_complexity Low_complexity 1 30 0 216 97 0 0 chr4 1685791 1685822 -200642525 + (CTG)n Simple_repeat Simple_repeat 1 31 0 24 32 0 0 chr4 1685836 1685867 -200642480 + GC_rich Low_complexity Low_complexity 1 31 0 252 231 77 0 chr4 1688360 1688438 -200639909 - MLT1J LTR MaLR -336 175 92 231 238 125 0 chr4 1688487 1688567 -200639780 - MER53 DNA DNA -75 114 25 191 281 47 0 chr4 1688852 1688916 -200639431 - L2 LINE L2 -741 2573 2507 816 172 0 0 chr4 1689749 1689883 -200638464 - AluJb SINE Alu -21 291 158 273 247 34 22 chr4 1690401 1690490 -200637857 + (CCCCG)n Simple_repeat Simple_repeat 1 90 0 224 150 0 0 chr4 1690944 1690984 -200637363 + MIR SINE MIR 105 144 -118 448 222 0 10 chr4 1691952 1692051 -200636296 + LTR23 LTR ERV1 340 437 0 1984 158 0 0 chr4 1692452 1692784 -200635563 + AluSx SINE Alu 1 332 0 1719 162 43 23 chr4 1693221 1693524 -200634823 - AluJb SINE Alu -3 309 1 561 124 21 31 chr4 1693759 1693856 -200634491 + LTR23-int LTR ERV1 1557 1652 -4679 1246 148 9 43 chr4 1693856 1694066 -200634281 + AluJo SINE Alu 86 288 -24 369 0 0 0 chr4 1694079 1694120 -200634227 + (CA)n Simple_repeat Simple_repeat 2 42 0 552 183 0 26 chr4 1694141 1694256 -200634091 - FLAM_C SINE Alu 0 143 32 3950 196 35 40 chr4 1694260 1695178 -200633169 + LTR23-int LTR ERV1 1675 2587 -3744 433 235 170 46 chr4 1695218 1695371 -200632976 + MER34C LTR ERV1 160 331 -254 2501 55 3 0 chr4 1695371 1695662 -200632685 + AluSp SINE Alu 1 292 -21 1377 143 40 48 chr4 1695698 1695949 -200632398 - AluJo SINE Alu -4 308 60 529 205 0 46 chr4 1695955 1696154 -200632193 + LTR23-int LTR ERV1 1098 1180 -3691 * 1320 243 35 62 chr4 1696142 1696645 -200631702 + LTR23-int LTR ERV1 1296 1784 -3339 2547 84 3 0 chr4 1696645 1696955 -200631392 + AluSp SINE Alu 1 311 -2 1320 243 35 62 chr4 1696955 1697015 -200631332 + LTR23-int LTR ERV1 1784 1844 -3279 2562 70 0 0 chr4 1697024 1697325 -200631022 - AluY SINE Alu -9 302 2 818 184 0 0 chr4 1697329 1697454 -200630893 - FRAM SINE Alu -16 160 36 280 75 43 129 chr4 1697470 1697548 -200630799 + LTR23-int LTR ERV1 1836 1906 -3217 1752 131 141 21 chr4 1697548 1697930 -200630417 - MSTA LTR MaLR 0 428 1 280 75 43 129 chr4 1697930 1697944 -200630403 + LTR23-int LTR ERV1 1906 1920 -3203 2584 69 0 0 chr4 1697945 1698251 -200630096 - AluSc SINE Alu -3 306 1 667 194 37 118 chr4 1698342 1698428 -200629919 + LTR23-int LTR ERV1 1925 2016 -3651 2404 76 17 3 chr4 1698428 1698730 -200629617 + AluY SINE Alu 1 306 -5 667 194 37 118 chr4 1698730 1698826 -200629521 + LTR23-int LTR ERV1 2016 2118 -3549 1692 156 0 4 chr4 1698826 1699082 -200629265 + AluJb SINE Alu 34 288 -24 667 194 37 118 chr4 1699082 1699301 -200629046 + LTR23-int LTR ERV1 2118 3710 -1957 2418 84 7 0 chr4 1699352 1699651 -200628696 + AluSp SINE Alu 1 301 -12 831 130 0 36 chr4 1699660 1699798 -200628549 + FLAM_C SINE Alu 1 133 0 2338 101 7 0 chr4 1700464 1700770 -200627577 - AluSx SINE Alu -4 308 1 1397 161 103 58 chr4 1701090 1701506 -200626841 + LTR23 LTR ERV1 1 435 -2 32 0 0 0 chr4 1702012 1702044 -200626303 + GC_rich Low_complexity Low_complexity 1 32 0 21 57 0 0 chr4 1702171 1702206 -200626141 + GC_rich Low_complexity Low_complexity 1 35 0 402 274 0 0 chr4 1702518 1702613 -200625734 + T-rich Low_complexity Low_complexity 1 95 0 21 0 0 0 chr4 1703475 1703496 -200624851 + AT_rich Low_complexity Low_complexity 1 21 0 407 251 9 68 chr4 1705778 1705997 -200622350 + AluYa5 SINE Alu 98 303 -8 61 68 0 0 chr4 1708953 1709070 -200619277 + GC_rich Low_complexity Low_complexity 1 117 0 21 110 0 0 chr4 1709220 1709311 -200619036 + GC_rich Low_complexity Low_complexity 1 91 0 265 234 4 32 chr4 1709735 1709815 -200618532 - MIR SINE MIR -61 147 69 213 182 0 0 chr4 1709941 1709974 -200618373 + C-rich Low_complexity Low_complexity 1 33 0 182 276 52 17 chr4 1711585 1711643 -200616704 - MIR SINE MIR -67 141 82 183 269 104 0 chr4 1711992 1712059 -200616288 - L2 LINE L2 -52 3261 3188 237 98 16 49 chr4 1713457 1713518 -200614829 + (CCCG)n Simple_repeat Simple_repeat 1 59 0 204 182 0 0 chr4 1717421 1717465 -200610882 + (TG)n Simple_repeat Simple_repeat 1 44 0 386 385 0 22 chr4 1717489 1717671 -200610676 + (CGTG)n Simple_repeat Simple_repeat 2 179 0 * 517 344 6 6 chr4 1717567 1717747 -200610600 + (TG)n Simple_repeat Simple_repeat 1 180 0 414 320 11 17 chr4 1717821 1718002 -200610345 + (TG)n Simple_repeat Simple_repeat 1 180 0 269 333 11 0 chr4 1720486 1720576 -200607771 + MIR SINE MIR 105 195 -67 202 320 13 0 chr4 1721713 1721791 -200606556 + (CA)n Simple_repeat Simple_repeat 1 79 0 534 173 39 47 chr4 1727783 1727910 -200600437 - AluSg/x SINE Alu -2 310 185 1739 131 34 37 chr4 1728254 1728551 -200599796 - AluJb SINE Alu -16 296 1 206 278 10 0 chr4 1728757 1728854 -200599493 + (TG)n Simple_repeat Simple_repeat 2 99 0 2187 104 7 0 chr4 1728907 1729205 -200599142 - AluSx SINE Alu -12 300 1 2074 121 3 3 chr4 1731563 1731870 -200596477 - AluSx SINE Alu -5 307 1 328 169 28 0 chr4 1732072 1732143 -200596204 - MER69 DNA AcHobo -3 2523 2451 * 414 248 88 9 chr4 1732142 1732255 -200596092 - MER69 DNA AcHobo -1854 672 551 1129 330 67 16 chr4 1732383 1733147 -200595200 - L1MEc LINE L1 -5557 839 37 853 297 147 5 chr4 1733147 1733568 -200594779 - MER69 DNA AcHobo -1982 544 64 200 321 47 28 chr4 1734017 1734123 -200594224 + L2 LINE L2 3120 3227 -86 865 310 81 52 chr4 1734468 1734948 -200593399 - L1ME LINE L1 -2976 3668 3175 184 274 274 0 chr4 1735542 1735644 -200592703 - L2 LINE L2 0 3272 3143 755 160 0 76 chr4 1735806 1735950 -200592397 + FLAM_C SINE Alu 1 133 0 290 300 75 59 chr4 1735965 1736207 -200592140 + MIR SINE MIR 8 256 -6 1083 215 63 11 chr4 1737086 1737449 -200590898 - L1ME LINE L1 -5133 1501 1120 909 175 38 6 chr4 1737450 1737610 -200590737 - AluJo SINE Alu -14 298 134 1584 261 44 25 chr4 1740324 1740849 -200587498 - L1ME LINE L1 -5525 1109 575 324 0 0 0 chr4 1741377 1741413 -200586934 + (TG)n Simple_repeat Simple_repeat 1 36 0 299 295 48 0 chr4 1743057 1743162 -200585185 - MIR SINE MIR -120 142 33 775 212 126 15 chr4 1743614 1743682 -200584665 + MLT1E LTR MaLR 253 312 -281 2095 104 12 61 chr4 1743682 1744010 -200584337 + AluSx SINE Alu 1 312 0 775 212 126 15 chr4 1744010 1744212 -200584135 + MLT1E LTR MaLR 312 592 -1 241 287 96 0 chr4 1744213 1744349 -200583998 - L2 LINE L2 -255 3058 2910 230 318 0 0 chr4 1744822 1744885 -200583462 + GA-rich Low_complexity Low_complexity 5 67 0 441 110 0 0 chr4 1746308 1746381 -200581966 + (GA)n Simple_repeat Simple_repeat 1 73 0 1270 284 88 49 chr4 1746419 1746982 -200581365 - L1M4 LINE L1 -5758 784 244 2191 99 3 0 chr4 1746982 1747274 -200581073 - AluSg SINE Alu -17 293 1 1270 284 88 49 chr4 1747274 1747298 -200581049 - L1M4 LINE L1 -6298 244 222 713 172 8 45 chr4 1747298 1747432 -200580915 - AluJo SINE Alu -169 133 5 1270 284 88 49 chr4 1747432 1747594 -200580753 - L1M4 LINE L1 -6320 222 5 1837 143 3 21 chr4 1747758 1748044 -200580303 + AluJb SINE Alu 1 281 -31 22 0 0 0 chr4 1748079 1748101 -200580246 + AT_rich Low_complexity Low_complexity 1 22 0 5924 182 20 18 chr4 1748160 1748545 -200579802 + L1MC3 LINE L1 6488 6871 -914 225 0 0 0 chr4 1748545 1748570 -200579777 + (CA)n Simple_repeat Simple_repeat 1 25 0 5924 182 20 18 chr4 1748570 1749478 -200578869 + L1MC3 LINE L1 6871 7784 -1 1584 126 4 8 chr4 1749485 1749723 -200578624 + AluJb SINE Alu 76 312 0 664 363 134 25 chr4 1749895 1750589 -200577758 + L1M4 LINE L1 4258 5027 -1119 355 406 19 14 chr4 1750672 1750884 -200577463 + L1M4 LINE L1 4917 5129 -1017 9382 223 25 61 chr4 1750894 1753857 -200574490 + L1M2 LINE L1 10 2867 -3982 1484 153 43 0 chr4 1753859 1754141 -200574206 - L1M4 LINE L1 -368 5816 5523 310 323 264 0 chr4 1754637 1754990 -200573357 + L2 LINE L2 2239 2684 -630 353 232 143 0 chr4 1755035 1755147 -200573200 + HAL1 LINE L1 5 132 -2375 474 18 0 0 chr4 1755428 1755483 -200572864 + (ATG)n Simple_repeat Simple_repeat 2 56 0 264 322 0 33 chr4 1755503 1755593 -200572754 + L2 LINE L2 1868 1954 -1360 829 316 58 69 chr4 1756279 1756886 -200571461 - L1M4 LINE L1 -1254 5687 5088 212 320 190 28 chr4 1757090 1757343 -200571004 - L2 LINE L2 -562 2752 2459 180 353 47 0 chr4 1757382 1757467 -200570880 - L2 LINE L2 -967 2347 2259 191 281 90 42 chr4 1757599 1757766 -200570581 + L2 LINE L2 2909 3083 -189 411 290 104 35 chr4 1757848 1758079 -200570268 + MIR SINE MIR 16 262 0 2527 256 75 60 chr4 1759123 1759622 -200568725 - L1MCc LINE L1 -3614 3327 2837 22581 24 0 0 chr4 1759622 1763017 -200565330 + L1PA4 LINE L1 2746 6147 -8 2527 256 75 60 chr4 1763017 1763201 -200565146 - L1MCc LINE L1 -4104 2837 2657 2072 131 3 0 chr4 1763201 1763523 -200564824 + AluSx SINE Alu 1 323 0 1848 172 3 0 chr4 1763526 1763817 -200564530 - AluJb SINE Alu -20 292 1 2527 256 75 60 chr4 1763817 1764668 -200563679 - L1MCc LINE L1 -4285 2656 1581 1970 130 3 10 chr4 1764668 1764827 -200563520 - AluSx SINE Alu -14 298 140 189 0 0 0 chr4 1764827 1764848 -200563499 + (TA)n Simple_repeat Simple_repeat 1 21 0 1970 130 3 10 chr4 1764848 1764988 -200563359 - AluSx SINE Alu -172 140 1 2527 256 75 60 chr4 1764988 1765449 -200562898 - L1MCc LINE L1 -5360 1581 1129 674 283 106 30 chr4 1765748 1766144 -200562203 - L1MCc LINE L1 -5975 448 23 1056 278 50 9 chr4 1766637 1766954 -200561393 - MLT1I LTR MaLR -53 356 27 832 298 106 6 chr4 1768345 1768657 -200559690 - MLT1I LTR MaLR -7 402 60 331 221 0 0 chr4 1768706 1768774 -200559573 - L1M4 LINE L1 -1886 4260 4193 213 175 0 0 chr4 1769020 1769060 -200559287 + (TG)n Simple_repeat Simple_repeat 1 40 0 2547 223 73 44 chr4 1769659 1770122 -200558225 - L1M4 LINE L1 -1276 4870 4371 2307 105 0 3 chr4 1770122 1770417 -200557930 - AluSx SINE Alu -18 294 1 2547 223 73 44 chr4 1770417 1770775 -200557572 - L1M4 LINE L1 -1775 4371 4025 2267 112 0 0 chr4 1770775 1771070 -200557277 + AluSx SINE Alu 1 295 -17 180 0 0 0 chr4 1771070 1771090 -200557257 + (TA)n Simple_repeat Simple_repeat 2 21 0 1791 215 68 10 chr4 1771091 1771608 -200556739 - L1M4 LINE L1 -2605 3541 2995 2331 206 44 125 chr4 1772092 1772327 -200556020 + L1ME1 LINE L1 5372 5624 -542 433 133 13 0 chr4 1772327 1772398 -200555949 + L1MB2 LINE L1 6096 6171 0 2331 206 44 125 chr4 1772398 1772494 -200555853 + L1ME1 LINE L1 5624 5726 -440 1479 174 0 50 chr4 1772494 1772792 -200555555 + AluJo SINE Alu 1 283 -29 315 0 0 0 chr4 1772793 1772828 -200555519 + (CAAAC)n Simple_repeat Simple_repeat 2 36 0 1781 167 3 30 chr4 1772830 1772967 -200555380 + AluSx SINE Alu 1 140 -172 2295 113 6 3 chr4 1772967 1773278 -200555069 + AluSx SINE Alu 1 312 0 1781 167 3 30 chr4 1773278 1773439 -200554908 + AluSx SINE Alu 140 291 -21 2331 206 44 125 chr4 1773439 1773905 -200554442 + L1ME1 LINE L1 5727 6104 -62 1549 147 33 50 chr4 1773905 1774204 -200554143 - AluJo SINE Alu -18 294 1 2331 206 44 125 chr4 1774204 1774255 -200554092 + L1ME1 LINE L1 6104 6158 -8 378 204 58 0 chr4 1774777 1774880 -200553467 + MER91C DNA MER1_type 2 110 -30 301 135 0 104 chr4 1776177 1776273 -200552074 + (GGAGA)n Simple_repeat Simple_repeat 2 87 0 2274 114 0 7 chr4 1778399 1778706 -200549641 + AluSx SINE Alu 1 305 -7 28 22 0 22 chr4 1779006 1779028 -200549319 + AT_rich Low_complexity Low_complexity 1 22 -23 1879 163 0 7 chr4 1779028 1779317 -200549030 - AluJo SINE Alu -25 287 1 28 22 0 22 chr4 1779317 1779340 -200549007 + AT_rich Low_complexity Low_complexity 22 45 0 1977 119 32 3 chr4 1779599 1779884 -200548463 + AluSx SINE Alu 1 293 -19 456 104 0 0 chr4 1779889 1779956 -200548391 + (GGGGA)n Simple_repeat Simple_repeat 4 70 0 1830 159 0 28 chr4 1780526 1780816 -200547531 + AluJb SINE Alu 5 286 -26 1887 266 68 27 chr4 1781814 1782567 -200545780 + L1ME LINE L1 874 1644 -4436 633 149 57 71 chr4 1782652 1782793 -200545554 + FLAM_C SINE Alu 2 140 -3 2663 144 7 2 chr4 1782793 1783217 -200545130 + L1MA5 LINE L1 5490 5915 -385 * 5026 168 33 47 chr4 1783213 1784226 -200544121 - L1MC3 LINE L1 -1362 6423 5426 191 298 97 0 chr4 1786658 1786772 -200541575 + L2 LINE L2 3146 3270 -2 407 290 61 0 chr4 1786785 1786916 -200541431 - MIR SINE MIR -76 186 48 2132 119 0 0 chr4 1787489 1787766 -200540581 - AluSg SINE Alu -33 277 1 231 143 71 0 chr4 1787808 1787850 -200540497 + L2 LINE L2 3226 3270 -2 185 303 49 57 chr4 1787858 1787980 -200540367 - L2 LINE L2 -457 2857 2737 1922 128 33 4 chr4 1788248 1788551 -200539796 + AluSx SINE Alu 1 311 0 309 230 81 0 chr4 1789034 1789108 -200539239 - MER112 DNA MER1_type -58 202 123 2059 114 4 4 chr4 1789695 1790005 -200538342 - AluSg SINE Alu 0 310 1 2003 161 0 3 chr4 1790093 1790391 -200537956 + AluSx SINE Alu 1 297 -15 296 310 9 17 chr4 1790744 1790860 -200537487 + MLT1K LTR MaLR 458 572 -16 1514 170 135 50 chr4 1792062 1792291 -200536056 + L1ME3A LINE L1 15 290 -6250 217 47 47 23 chr4 1792291 1792334 -200536013 + (CAAAA)n Simple_repeat Simple_repeat 2 45 0 1514 170 135 50 chr4 1792334 1792481 -200535866 + L1ME3A LINE L1 290 423 -6117 545 220 8 8 chr4 1792501 1792619 -200535728 + MER31B LTR ERV1 273 390 -76 281 230 68 0 chr4 1792591 1792665 -200535682 + MER67D LTR ERV1 432 510 -4 * 2204 256 90 4 chr4 1792669 1793434 -200534913 + L1ME3A LINE L1 3342 4172 -2368 699 176 29 0 chr4 1793437 1793573 -200534774 + L1MC/D LINE L1 5616 5755 -487 24 53 0 0 chr4 1793647 1793685 -200534662 + AT_rich Low_complexity Low_complexity 1 38 0 2304 118 0 0 chr4 1793760 1794066 -200534281 - AluSg SINE Alu -4 306 1 27 0 0 0 chr4 1794187 1794214 -200534133 + AT_rich Low_complexity Low_complexity 1 27 0 1028 272 98 55 chr4 1794563 1795673 -200532674 + L1ME3A LINE L1 5176 6341 -223 33 25 0 0 chr4 1795697 1795737 -200532610 + AT_rich Low_complexity Low_complexity 1 40 0 2228 95 14 3 chr4 1795848 1796144 -200532203 + AluSq SINE Alu 1 299 -14 2443 98 0 0 chr4 1797256 1797561 -200530786 - AluSp SINE Alu -8 305 1 385 336 38 0 chr4 1797567 1797698 -200530649 - L2 LINE L2 -5 3267 3132 1016 231 92 129 chr4 1797803 1798005 -200530342 + L1ME1 LINE L1 1437 1645 -5076 2270 88 3 20 chr4 1798005 1798300 -200530047 + AluSg SINE Alu 1 290 -20 1016 231 92 129 chr4 1798300 1798651 -200529696 + L1ME1 LINE L1 1645 1957 -4764 1844 142 0 21 chr4 1798651 1798964 -200529383 + AluJb SINE Alu 24 312 0 1016 231 92 129 chr4 1798964 1799163 -200529184 + L1ME1 LINE L1 1957 2162 -4559 286 119 24 0 chr4 1799168 1799210 -200529137 - FLAM_A SINE Alu -32 101 59 1083 194 5 23 chr4 1799215 1799414 -200528933 + AluJo SINE Alu 99 295 -17 2409 90 0 3 chr4 1799414 1799725 -200528622 + AluSg SINE Alu 1 310 0 1083 194 5 23 chr4 1799725 1799742 -200528605 + AluJo SINE Alu 295 311 -1 343 152 133 48 chr4 1799752 1799857 -200528490 + L1ME1 LINE L1 2629 2742 -3798 301 276 0 0 chr4 1799924 1800011 -200528336 + L1ME1 LINE L1 2728 2814 -3726 * 2824 249 35 32 chr4 1799998 1801481 -200526866 + L1ME1 LINE L1 4942 6425 -135 1856 177 3 19 chr4 1801633 1801950 -200526397 - AluSx SINE Alu 0 312 1 1162 132 93 39 chr4 1801953 1802157 -200526190 - AluJo SINE Alu -11 301 87 282 302 52 85 chr4 1802454 1802702 -200525645 + L1MC/D LINE L1 5507 5746 -2062 310 250 49 32 chr4 1803035 1803200 -200525147 + HAL1b LINE L1 1191 1340 -8 2254 92 3 7 chr4 1803200 1803495 -200524852 - AluY SINE Alu -17 294 1 2565 58 7 3 chr4 1803527 1803835 -200524512 + AluY SINE Alu 1 309 -2 544 237 189 29 chr4 1803872 1804318 -200524029 + L1ME LINE L1 5191 5721 -400 293 173 214 0 chr4 1804354 1804464 -200523883 + L1MC/D LINE L1 5687 5819 -401 25 31 0 0 chr4 1805324 1805356 -200522991 + AT_rich Low_complexity Low_complexity 1 32 0 2223 84 14 0 chr4 1805456 1805743 -200522604 - AluY SINE Alu -20 291 1 248 219 115 31 chr4 1806795 1806891 -200521456 + MIR SINE MIR 63 166 -96 2226 102 10 3 chr4 1807052 1807356 -200520991 + AluSg SINE Alu 1 306 -4 358 125 0 47 chr4 1807562 1807626 -200520721 - AluS SINE Alu -9 291 231 2143 116 0 10 chr4 1807564 1807858 -200520489 - AluSx SINE Alu -21 291 1 234 147 162 59 chr4 1807952 1808020 -200520327 - MER113 DNA MER1_type? -46 475 401 272 220 55 11 chr4 1808020 1808111 -200520236 - L1MC3 LINE L1 -7 7778 7684 1342 289 94 15 chr4 1809195 1810008 -200518339 - L1ME3A LINE L1 -17 6153 5179 1811 156 3 26 chr4 1810008 1810316 -200518031 - AluJo SINE Alu -11 301 1 1342 289 94 15 chr4 1810316 1810559 -200517788 - L1ME3A LINE L1 -991 5179 4957 328 138 79 0 chr4 1810641 1810704 -200517643 - AluJb SINE Alu -7 295 238 4429 116 114 129 chr4 1810709 1812120 -200516227 + pTR5 LTR ERV1 757 2438 0 1718 131 0 0 chr4 1812128 1812364 -200515983 - AluJb SINE Alu -76 236 1 481 285 0 121 chr4 1812406 1812711 -200515636 - L1ME3A LINE L1 -1316 4830 4563 243 296 45 15 chr4 1813225 1813357 -200514990 - MER5B DNA MER1_type -2 176 41 516 344 100 32 chr4 1813404 1813826 -200514521 + L2 LINE L2 2223 2615 -699 2276 110 3 0 chr4 1813826 1814127 -200514220 + AluSp SINE Alu 1 302 -11 2438 109 0 0 chr4 1814127 1814439 -200513908 + AluSx SINE Alu 1 312 0 516 344 100 32 chr4 1814439 1814470 -200513877 + L2 LINE L2 2615 2642 -672 5075 131 14 74 chr4 1814470 1815386 -200512961 + L1MC1 LINE L1 5452 6312 -21 1888 171 0 0 chr4 1815386 1815679 -200512668 - AluJo SINE Alu -19 293 1 5075 131 14 74 chr4 1815679 1815700 -200512647 + L1MC1 LINE L1 6312 6333 0 516 344 100 32 chr4 1815700 1815863 -200512484 + L2 LINE L2 2642 2883 -431 2642 188 47 55 chr4 1816048 1816597 -200511750 + MLT2B3 LTR ERVL 1 545 -9 425 207 38 110 chr4 1817156 1817219 -200511128 + L1M4 LINE L1 2760 2826 -3320 2187 124 0 0 chr4 1817219 1817510 -200510837 + AluSq SINE Alu 1 291 -22 425 207 38 110 chr4 1817510 1817683 -200510664 + L1M4 LINE L1 2826 2979 -3167 317 217 66 9 chr4 1817689 1817795 -200510552 - L2 LINE L2 -19 3294 3183 219 294 166 30 chr4 1818710 1818975 -200509372 - L2 LINE L2 -399 2915 2615 367 277 0 0 chr4 1819189 1819283 -200509064 - MIR SINE MIR -69 193 100 1630 181 7 24 chr4 1820877 1821170 -200507177 + AluJo SINE Alu 5 292 -20 938 141 0 0 chr4 1821259 1821401 -200506946 + FLAM_C SINE Alu 1 142 -1 321 250 151 12 chr4 1821585 1821757 -200506590 + L1ME LINE L1 5254 5449 -713 207 0 0 0 chr4 1821825 1821848 -200506499 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 450 325 95 11 chr4 1822187 1822571 -200505776 + L1ME LINE L1 5402 5816 -354 430 232 10 0 chr4 1822895 1822994 -200505353 - L1MA4A LINE L1 -21 6282 6183 660 188 11 40 chr4 1822995 1823171 -200505176 - L1MA4A LINE L1 -183 6120 5950 2137 130 0 3 chr4 1824424 1824723 -200503624 - AluSx SINE Alu -14 298 1 304 307 70 42 chr4 1824979 1825220 -200503127 - L1M4 LINE L1 -1443 4703 4456 198 304 104 26 chr4 1826178 1826293 -200502054 - MIR SINE MIR -111 151 28 344 147 0 93 chr4 1827212 1827287 -200501060 + MIR SINE MIR 86 153 -109 311 206 62 89 chr4 1827536 1827682 -200500665 + LTR67 LTR ERVL 416 557 0 2151 141 0 0 chr4 1828214 1828511 -200499836 - AluSx SINE Alu -15 297 1 2307 115 0 3 chr4 1830732 1831045 -200497302 - AluSx SINE Alu 0 312 1 21 0 0 0 chr4 1831056 1831077 -200497270 + AT_rich Low_complexity Low_complexity 1 21 0 180 0 0 0 chr4 1831099 1831119 -200497228 + (TAAAA)n Simple_repeat Simple_repeat 2 21 0 2305 75 0 69 chr4 1831296 1831614 -200496733 + AluY SINE Alu 1 296 -15 4240 174 76 32 chr4 1831641 1831783 -200496564 + L1MB7 LINE L1 4752 4886 -1298 1700 202 64 36 chr4 1831783 1832233 -200496114 + MLT1C LTR MaLR 5 467 0 4240 174 76 32 chr4 1832233 1833444 -200494903 + L1MB7 LINE L1 4886 6179 -5 1949 112 101 0 chr4 1833477 1833753 -200494594 - AluSx SINE Alu -8 304 1 350 279 51 35 chr4 1833868 1834065 -200494282 + HAL1b LINE L1 340 539 -809 2893 207 70 60 chr4 1834095 1835063 -200493284 + L1MC5 LINE L1 6530 7527 -434 2348 104 3 3 chr4 1835063 1835372 -200492975 + AluSx SINE Alu 1 309 -3 2893 207 70 60 chr4 1835372 1835507 -200492840 + L1MC5 LINE L1 7527 7659 -302 7064 176 54 49 chr4 1835521 1836830 -200491517 + L1MA4 LINE L1 14 1314 -5014 2122 125 0 0 chr4 1836830 1837143 -200491204 - AluSx SINE Alu 0 313 1 7064 176 54 49 chr4 1837143 1837429 -200490918 + L1MA4 LINE L1 1314 1597 -4731 1761 164 0 18 chr4 1837429 1837715 -200490632 + AluJo SINE Alu 2 282 -30 7064 176 54 49 chr4 1837715 1837918 -200490429 + L1MA4 LINE L1 1597 1797 -4531 2447 63 0 7 chr4 1837918 1838265 -200490082 + AluY SINE Alu 1 311 0 7064 176 54 49 chr4 1838265 1838937 -200489410 + L1MA4 LINE L1 1797 2479 -3849 5902 131 55 25 chr4 1838921 1838957 -200489390 + L1MA4 LINE L1 4712 4745 -1737 * 2549 69 0 0 chr4 1838957 1839261 -200489086 + AluY SINE Alu 1 304 -7 5902 131 55 25 chr4 1839261 1839348 -200488999 + L1MA4 LINE L1 4745 4828 -1654 2322 94 13 0 chr4 1839348 1839646 -200488701 + AluSc SINE Alu 1 302 -7 5902 131 55 25 chr4 1839646 1841235 -200487112 + L1MA4 LINE L1 4828 6475 -7 418 138 49 183 chr4 1841258 1841466 -200486881 + L1MC5 LINE L1 7645 7817 -144 2050 93 0 7 chr4 1841466 1841735 -200486612 + AluSg SINE Alu 35 301 -9 418 138 49 183 chr4 1841735 1841772 -200486575 + L1MC5 LINE L1 7817 7857 -104 2116 102 39 0 chr4 1841952 1842237 -200486110 - AluSg SINE Alu -14 296 1 27 61 0 15 chr4 1842260 1842285 -200486062 + AT_rich Low_complexity Low_complexity 1 25 -40 851 146 0 0 chr4 1842285 1842415 -200485932 + AluJ SINE Alu 1 130 -172 27 61 0 15 chr4 1842415 1842455 -200485892 + AT_rich Low_complexity Low_complexity 25 65 0 391 257 0 26 chr4 1843030 1843143 -200485204 - MIR SINE MIR -82 180 71 562 317 23 58 chr4 1843590 1843849 -200484498 - MIR SINE MIR -1 261 12 905 131 0 91 chr4 1844332 1844508 -200483839 + AluJ SINE Alu 132 291 -21 225 214 0 0 chr4 1844509 1844565 -200483782 - L1MC4 LINE L1 -1339 6703 6648 248 254 56 14 chr4 1844893 1844964 -200483383 - L2 LINE L2 -8 3305 3232 1632 158 4 36 chr4 1845061 1845339 -200483008 - AluJo SINE Alu 0 312 44 407 207 47 64 chr4 1845390 1845556 -200482791 + L1MC4 LINE L1 7084 7247 -740 723 123 66 0 chr4 1845742 1845864 -200482483 - MER53 DNA DNA -59 130 1 298 267 62 27 chr4 1845893 1846039 -200482308 + L1MC5 LINE L1 7268 7418 -543 229 243 43 14 chr4 1846065 1846135 -200482212 + L1MC4 LINE L1 7586 7657 -385 192 288 125 11 chr4 1846447 1846631 -200481716 - L2 LINE L2 -297 3016 2812 257 91 0 0 chr4 1846678 1846711 -200481636 - U2 snRNA snRNA -152 36 4 1204 285 66 2 chr4 1846720 1847173 -200481174 - L2 LINE L2 -537 2777 2296 1520 236 39 16 chr4 1848505 1848996 -200479351 + L1M4 LINE L1 4108 4609 -1537 2051 126 10 10 chr4 1849175 1849476 -200478871 - AluSx SINE Alu -11 301 1 1321 170 54 35 chr4 1849572 1849889 -200478458 + L1M4 LINE L1 4440 4762 -1384 940 202 21 0 chr4 1849906 1850094 -200478253 + L1PB1 LINE L1 6 197 -6666 * 14974 189 23 17 chr4 1850091 1850585 -200477762 + L1PB1 LINE L1 1392 1882 -4985 2332 88 0 38 chr4 1850585 1850904 -200477443 + AluSc SINE Alu 1 307 -2 14974 189 23 17 chr4 1850904 1851719 -200476628 + L1PB1 LINE L1 1882 2691 -4176 194 0 39 0 chr4 1851719 1851745 -200476602 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 14974 189 23 17 chr4 1851745 1852055 -200476292 + L1PB1 LINE L1 2691 2998 -3869 2270 114 0 0 chr4 1852055 1852354 -200475993 + AluSx SINE Alu 14 312 0 14974 189 23 17 chr4 1852354 1852900 -200475447 + L1PB1 LINE L1 2998 3539 -3328 2235 115 0 3 chr4 1852900 1853196 -200475151 + AluSc SINE Alu 1 295 -14 14974 189 23 17 chr4 1853196 1853429 -200474918 + L1PB1 LINE L1 3539 3769 -3098 2337 94 7 3 chr4 1853429 1853736 -200474611 + AluSq SINE Alu 2 309 -4 14974 189 23 17 chr4 1853736 1855194 -200473153 + L1PB1 LINE L1 3769 5217 -1650 2364 96 0 7 chr4 1855194 1855495 -200472852 + AluSg SINE Alu 1 299 -11 14974 189 23 17 chr4 1855495 1856925 -200471422 + L1PB1 LINE L1 5217 6782 -85 307 66 0 66 chr4 1856925 1856986 -200471361 + (GGAAA)n Simple_repeat Simple_repeat 1 57 0 1701 159 66 3 chr4 1857007 1857433 -200470914 + L1M4 LINE L1 5149 5597 -587 2053 117 7 0 chr4 1858309 1858599 -200469748 + AluSq SINE Alu 1 292 -21 2187 109 3 0 chr4 1858801 1859103 -200469244 + AluSg SINE Alu 1 303 -7 1380 201 100 75 chr4 1859127 1859253 -200469094 + Charlie2 DNA MER1_type 2169 2290 -572 1895 161 0 0 chr4 1859253 1859563 -200468784 - AluJb SINE Alu -2 310 1 1380 201 100 75 chr4 1859563 1859586 -200468761 + Charlie2 DNA MER1_type 2290 2311 -551 212 75 0 25 chr4 1859586 1859626 -200468721 + (TA)n Simple_repeat Simple_repeat 2 40 0 1380 201 100 75 chr4 1859626 1859898 -200468449 + Charlie2 DNA MER1_type 2311 2575 -287 1723 157 7 14 chr4 1859898 1860237 -200468110 + AluJb SINE Alu 1 312 0 1978 111 14 0 chr4 1860239 1860519 -200467828 + AluSg SINE Alu 1 284 -26 378 0 0 0 chr4 1860522 1860564 -200467783 + (TAAA)n Simple_repeat Simple_repeat 3 44 0 2003 104 7 0 chr4 1860569 1860899 -200467448 + AluSx SINE Alu 3 334 0 1380 201 100 75 chr4 1860899 1861094 -200467253 + Charlie2 DNA MER1_type 2579 2824 -38 1695 135 0 113 chr4 1861094 1861440 -200466907 + AluJb SINE Alu 3 302 0 1380 201 100 75 chr4 1861440 1861481 -200466866 + Charlie2 DNA MER1_type 2824 2862 0 318 211 18 0 chr4 1861712 1861769 -200466578 - MIR SINE MIR -197 65 8 1722 157 0 35 chr4 1861965 1862284 -200466063 - AluJo SINE Alu -4 308 1 303 330 28 132 chr4 1862290 1862608 -200465739 + L2 LINE L2 2988 3272 0 401 240 0 0 chr4 1863168 1863243 -200465104 - MIR SINE MIR -184 78 4 528 296 161 28 chr4 1863257 1863552 -200464795 + L1ME LINE L1 4342 4685 -1461 2127 112 0 0 chr4 1863552 1863847 -200464500 + AluSx SINE Alu 1 295 -17 528 296 161 28 chr4 1863847 1863875 -200464472 + L1ME LINE L1 4685 4708 -1438 246 286 8 17 chr4 1864043 1864162 -200464185 + L1P LINE L1 5244 5361 -785 320 314 38 9 chr4 1864222 1864327 -200464020 + L1ME LINE L1 5510 5617 -2191 359 233 0 117 chr4 1864428 1864548 -200463799 - L1MC4 LINE L1 -1323 6719 6614 282 315 64 34 chr4 1864610 1864877 -200463470 + L1ME LINE L1 5605 5882 -239 561 284 105 4 chr4 1865006 1865235 -200463112 - LTR16A LTR ERVL -97 353 102 258 250 68 61 chr4 1865422 1865570 -200462777 - HERVL LTR ERVL -324 5330 5182 1104 335 113 25 chr4 1865669 1866608 -200461739 - HERVL LTR ERVL -661 5103 4082 545 264 59 42 chr4 1866671 1866910 -200461437 - HERVL LTR ERVL -1333 3663 3421 904 317 117 15 chr4 1866927 1867447 -200460900 - ERVL LTR ERVL -2076 3688 3116 659 191 32 8 chr4 1867619 1867745 -200460602 + FLAM_A SINE Alu 13 141 -1 2114 85 7 43 chr4 1867748 1868053 -200460294 + AluSp SINE Alu 1 294 -19 630 263 100 11 chr4 1868056 1868246 -200460101 - ERVL LTR ERVL -2069 2927 2721 2345 253 110 21 chr4 1868306 1869052 -200459295 - ERVL LTR ERVL -2427 2569 1758 2195 234 66 12 chr4 1869072 1869663 -200458684 - ERVL LTR ERVL -3545 1451 829 605 246 186 80 chr4 1869663 1870351 -200457996 + LTR41 LTR ERVL 1 761 -12 857 183 35 18 chr4 1870735 1870904 -200457443 - AluJb SINE Alu -12 300 129 641 110 0 20 chr4 1870916 1871016 -200457331 + MER4A LTR ERV1 1 98 -566 2342 91 66 43 chr4 1871022 1871177 -200457170 + MER4A LTR ERV1 261 411 -253 1868 146 7 0 chr4 1871177 1871472 -200456875 - AluSx SINE Alu -15 297 1 2342 91 66 43 chr4 1871472 1871711 -200456636 + MER4A LTR ERV1 411 664 0 854 164 205 52 chr4 1871872 1872140 -200456207 + AluJb SINE Alu 2 310 -2 1032 250 122 22 chr4 1872225 1872585 -200455762 - ERVL LTR ERVL -4600 396 1 235 208 194 14 chr4 1872585 1872657 -200455690 - LTR16A LTR ERVL 0 450 366 6127 120 36 106 chr4 1872776 1872838 -200455509 - Tigger3b DNA MER2_type -1818 1210 1145 2096 156 3 9 chr4 1872838 1873177 -200455170 + MER1B DNA MER1_type 1 337 0 6127 120 36 106 chr4 1873177 1874266 -200454081 - Tigger3b DNA MER2_type -1883 1145 157 2139 104 3 3 chr4 1874266 1874563 -200453784 + AluSq SINE Alu 1 297 -16 6127 120 36 106 chr4 1874563 1874709 -200453638 - Tigger3b DNA MER2_type -2871 157 2 22 70 0 0 chr4 1874717 1874760 -200453587 + AT_rich Low_complexity Low_complexity 1 43 0 201 133 0 0 chr4 1874855 1874885 -200453462 + (TATG)n Simple_repeat Simple_repeat 3 32 0 1863 121 4 0 chr4 1874907 1875179 -200453168 + AluSx SINE Alu 37 309 -3 21 36 0 0 chr4 1875282 1875310 -200453037 + AT_rich Low_complexity Low_complexity 1 28 0 1674 150 46 4 chr4 1875320 1875600 -200452747 + AluJo SINE Alu 4 295 -17 495 296 123 28 chr4 1875602 1875936 -200452411 - MLT1J LTR MaLR -71 440 38 609 263 44 12 chr4 1876595 1876755 -200451592 + MLT1E LTR MaLR 1 165 -428 1394 231 87 9 chr4 1876781 1877115 -200451232 + MLT1E LTR MaLR 226 585 -8 506 135 0 0 chr4 1877237 1877311 -200451036 - FLAM SINE Alu -16 127 54 180 143 0 0 chr4 1877843 1877885 -200450462 + (A)n Simple_repeat Simple_repeat 1 42 0 2104 73 49 0 chr4 1877947 1878234 -200450113 - AluY SINE Alu -10 301 1 2045 92 14 7 chr4 1879141 1879456 -200448891 + AluSq SINE Alu 1 317 0 1971 131 0 0 chr4 1879615 1879898 -200448449 + AluSx SINE Alu 5 287 -25 2049 104 3 3 chr4 1880917 1881205 -200447142 + AluSc SINE Alu 1 288 -21 22 0 0 0 chr4 1881769 1881791 -200446556 + AT_rich Low_complexity Low_complexity 1 22 0 25 0 0 0 chr4 1881809 1881834 -200446513 + AT_rich Low_complexity Low_complexity 1 25 0 294 232 274 0 chr4 1882024 1882119 -200446228 - L2 LINE L2 0 3313 3193 401 276 79 26 chr4 1882525 1882677 -200445670 + MER5A DNA MER1_type 29 188 -1 444 221 19 10 chr4 1883010 1883114 -200445233 + HsTC2 DNA Tc2 1 105 -1793 1132 213 98 21 chr4 1883116 1883454 -200444893 + HsTC2 DNA Tc2 1522 1885 -13 527 308 88 65 chr4 1883456 1883807 -200444540 + L1ME4a LINE L1 5524 5882 -239 575 248 27 148 chr4 1884228 1884488 -200443859 + L1M4 LINE L1 2272 2475 -3671 2176 95 0 0 chr4 1884488 1884782 -200443565 - AluSg SINE Alu -16 294 1 575 248 27 148 chr4 1884782 1884892 -200443455 + L1M4 LINE L1 2475 2597 -3549 597 116 67 37 chr4 1884912 1885032 -200443315 + L1M3 LINE L1 5429 5554 -626 446 208 43 87 chr4 1885021 1885279 -200443068 + L1ME1 LINE L1 5678 5904 -262 * 1915 105 7 18 chr4 1886175 1886499 -200441848 + AluSx SINE Alu 1 321 0 1384 156 80 51 chr4 1886771 1887046 -200441301 + AluJo SINE Alu 13 295 -17 330 174 11 33 chr4 1887046 1887138 -200441209 + GA-rich Low_complexity Low_complexity 1 90 0 196 272 102 37 chr4 1887146 1887338 -200441009 + MIR SINE MIR 16 218 -44 372 253 91 0 chr4 1887475 1887574 -200440773 - MER91C DNA MER1_type 0 140 33 214 218 18 0 chr4 1888027 1888082 -200440265 + A-rich Low_complexity Low_complexity 5 60 0 287 204 0 84 chr4 1891893 1892035 -200436312 + (CGGGG)n Simple_repeat Simple_repeat 4 133 0 2273 51 34 3 chr4 1892377 1892425 -200435922 + AluSg SINE Alu 1 46 -264 180 0 0 0 chr4 1892425 1892445 -200435902 + (G)n Simple_repeat Simple_repeat 1 20 0 2273 51 34 3 chr4 1892445 1892688 -200435659 + AluSg SINE Alu 46 301 -9 267 261 103 18 chr4 1892803 1892969 -200435378 - LTR37B LTR ERV1 -152 316 106 770 74 11 63 chr4 1893494 1893683 -200434664 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 228 292 0 0 chr4 1899426 1899491 -200428856 + (TG)n Simple_repeat Simple_repeat 1 65 0 209 262 0 0 chr4 1899675 1899717 -200428630 + (CGGA)n Simple_repeat Simple_repeat 2 43 0 314 244 51 0 chr4 1903796 1903874 -200424473 - L1ME4a LINE L1 -57 6064 5983 345 306 85 56 chr4 1903878 1904307 -200424040 + L1ME4a LINE L1 5127 6120 -1 217 189 167 33 chr4 1907323 1907413 -200420934 + L2 LINE L2 3133 3234 -38 334 311 67 8 chr4 1909891 1910010 -200418337 + MIR SINE MIR 94 219 -43 24 67 0 0 chr4 1911024 1911069 -200417278 + GC_rich Low_complexity Low_complexity 1 45 0 40 87 0 0 chr4 1911135 1911238 -200417109 + GC_rich Low_complexity Low_complexity 1 103 0 204 184 41 0 chr4 1911263 1911312 -200417035 + G-rich Low_complexity Low_complexity 4 54 0 34 42 0 0 chr4 1911441 1911489 -200416858 + GC_rich Low_complexity Low_complexity 1 48 0 48 72 0 0 chr4 1911577 1911674 -200416673 + GC_rich Low_complexity Low_complexity 1 97 0 201 238 16 16 chr4 1911794 1911857 -200416490 + (CCGGG)n Simple_repeat Simple_repeat 3 65 0 28 29 0 0 chr4 1912194 1912229 -200416118 + GC_rich Low_complexity Low_complexity 1 35 0 2162 60 53 3 chr4 1912738 1913023 -200415324 - AluSc SINE Alu -10 299 1 291 269 47 32 chr4 1915697 1915858 -200412489 + MIR SINE MIR 89 250 -12 192 338 44 22 chr4 1915851 1915987 -200412360 + L3 LINE CR1 1336 1474 -103 * 205 290 116 0 chr4 1917820 1917889 -200410458 + MIR SINE MIR 107 183 -79 296 276 13 0 chr4 1918162 1918238 -200410109 - MER81 DNA DNA -36 78 2 189 264 0 0 chr4 1922112 1922184 -200406163 + (TG)n Simple_repeat Simple_repeat 1 72 0 637 275 117 43 chr4 1924190 1924605 -200403742 + MLT1D LTR MaLR 22 467 0 291 206 28 19 chr4 1924948 1925055 -200403292 - HAL1 LINE L1 -1331 1176 1069 335 361 100 11 chr4 1925068 1925248 -200403099 - HAL1 LINE L1 -1490 1017 822 284 222 25 25 chr4 1925257 1925338 -200403009 + L1ME LINE L1 5510 5590 -572 271 266 112 21 chr4 1925909 1926052 -200402295 - HAL1 LINE L1 -1814 693 538 1961 229 50 12 chr4 1926069 1926584 -200401763 + L1MB3 LINE L1 5647 6181 -2 363 222 0 0 chr4 1926707 1926788 -200401559 + L1MB7 LINE L1 6104 6184 0 2264 91 3 3 chr4 1926792 1927101 -200401246 + AluSx SINE Alu 2 310 -2 1370 203 29 73 chr4 1927108 1927846 -200400501 + L1MB7 LINE L1 4316 5086 -1098 1584 133 0 4 chr4 1927846 1928079 -200400268 - AluJb SINE Alu -78 234 3 1370 203 29 73 chr4 1928079 1928766 -200399581 + L1MB7 LINE L1 5086 5802 -382 1965 106 7 0 chr4 1928766 1929041 -200399306 + AluSx SINE Alu 24 300 -12 1370 203 29 73 chr4 1929041 1929091 -200399256 + L1MB7 LINE L1 5802 5853 -331 2373 57 10 7 chr4 1929091 1929389 -200398958 + AluY SINE Alu 1 299 -12 1370 203 29 73 chr4 1929389 1929621 -200398726 + L1MB7 LINE L1 5853 6130 -54 302 328 61 23 chr4 1929668 1929799 -200398548 + L1ME LINE L1 5722 5857 -264 1857 142 6 25 chr4 1929818 1930136 -200398211 + AluJo SINE Alu 1 312 0 2053 175 47 11 chr4 1930933 1931315 -200397032 - MSTD LTR MaLR 0 396 1 773 148 8 0 chr4 1932411 1932533 -200395814 + FLAM_A SINE Alu 20 142 0 1061 163 2 6 chr4 1932695 1933203 -200395144 + (TCCA)n Simple_repeat Simple_repeat 1 506 0 637 200 8 8 chr4 1933851 1933971 -200394376 - AluJb SINE Alu -47 265 146 2416 197 15 15 chr4 1934513 1934979 -200393368 + MLT1C LTR MaLR 1 466 -1 394 231 29 0 chr4 1936081 1936185 -200392162 + MLT1E3 LTR MaLR 442 548 -76 753 252 204 21 chr4 1936448 1936827 -200391520 + MLT1D LTR MaLR 52 389 -7 182 170 0 64 chr4 1937731 1937778 -200390569 - L2 LINE L2 -220 3052 3009 288 218 0 0 chr4 1938230 1938285 -200390062 + MIR SINE MIR 92 146 -116 1632 174 54 14 chr4 1938290 1938584 -200389763 + AluJo SINE Alu 1 306 -6 1686 186 13 0 chr4 1938596 1938903 -200389444 + AluSx SINE Alu 1 311 -1 346 178 78 9 chr4 1939186 1939285 -200389062 - AluJ/FLAM SINE Alu -225 77 1 247 167 0 121 chr4 1939285 1939351 -200388996 - MIR SINE MIR -126 136 79 188 298 0 0 chr4 1940813 1940860 -200387487 - L3b LINE CR1 -237 1346 1300 5368 235 53 35 chr4 1942239 1943066 -200385281 + L1ME LINE L1 3475 4285 -1861 2502 57 0 0 chr4 1943066 1943366 -200384981 + AluY SINE Alu 1 300 -11 5368 235 53 35 chr4 1943366 1944424 -200383923 + L1ME LINE L1 4285 5395 -751 822 126 15 37 chr4 1944435 1944570 -200383777 + FLAM_A SINE Alu 10 141 -1 675 174 58 0 chr4 1944573 1944711 -200383636 + L1ME LINE L1 5392 5537 -629 2122 113 3 29 chr4 1944754 1945064 -200383283 - AluSq SINE Alu -10 303 2 255 319 148 0 chr4 1945237 1945372 -200382975 + L2 LINE L2 2919 3073 -240 308 298 21 0 chr4 1948962 1949056 -200379291 + L1ME LINE L1 5561 5656 -465 697 243 98 6 chr4 1949056 1949229 -200379118 + AluJo SINE Alu 120 308 -4 330 183 11 21 chr4 1949229 1949322 -200379025 + G-rich Low_complexity Low_complexity 2 93 0 301 275 142 0 chr4 1949330 1949450 -200378897 + L1M4 LINE L1 3081 3217 -2929 1681 181 7 16 chr4 1949482 1949792 -200378555 - AluJo SINE Alu -3 309 3 244 228 0 0 chr4 1949799 1949856 -200378491 + L1ME4a LINE L1 6061 6117 -4 209 276 67 75 chr4 1950830 1950964 -200377383 + L2 LINE L2 3138 3270 -2 1084 291 59 0 chr4 1952162 1952568 -200375779 + L1MB7 LINE L1 5477 5906 -278 304 215 43 32 chr4 1952701 1952794 -200375553 + L1MB7 LINE L1 5908 6001 -183 399 296 54 96 chr4 1955599 1955879 -200372468 - L2 LINE L2 0 3272 3005 254 281 0 0 chr4 1956055 1956112 -200372235 - L1ME3A LINE L1 -69 6170 6114 571 151 35 126 chr4 1956271 1956470 -200371877 - MER53 DNA DNA -6 183 3 312 351 161 0 chr4 1956475 1956686 -200371661 - L1ME3A LINE L1 -306 5933 5689 1372 241 71 41 chr4 1956747 1957192 -200371155 - L1ME3A LINE L1 -652 5587 5106 1604 159 37 40 chr4 1957192 1957488 -200370859 - AluJo SINE Alu -15 297 3 1372 241 71 41 chr4 1957488 1957795 -200370552 - L1ME3A LINE L1 -1133 5106 4810 198 0 0 0 chr4 1957811 1957833 -200370514 + (TTC)n Simple_repeat Simple_repeat 3 24 0 835 219 0 0 chr4 1957835 1957981 -200370366 - FRAM SINE Alu -30 146 1 376 252 135 0 chr4 1958002 1958113 -200370234 + L1ME LINE L1 5645 5770 -400 355 206 0 0 chr4 1958127 1958195 -200370152 - L1ME3A LINE L1 -1464 4751 4684 231 167 0 0 chr4 1958195 1958237 -200370110 + GA-rich Low_complexity Low_complexity 1 42 0 913 112 22 11 chr4 1958262 1958440 -200369907 + GA-rich Low_complexity Low_complexity 1 180 0 241 244 0 0 chr4 1958440 1958485 -200369862 + polypurine Low_complexity Low_complexity 1 45 0 406 332 59 5 chr4 1958497 1958717 -200369630 - L1ME3A LINE L1 -1538 4677 4446 1466 185 188 28 chr4 1958717 1959111 -200369236 + MSTB2 LTR MaLR 1 457 0 2736 249 32 78 chr4 1959114 1959736 -200368611 - L1ME3A LINE L1 -1774 4441 3792 1847 190 0 0 chr4 1959736 1960036 -200368311 - AluJb SINE Alu -10 302 3 2736 249 32 78 chr4 1960036 1960221 -200368126 - L1ME3A LINE L1 -2423 3792 3600 1832 189 3 0 chr4 1960221 1960518 -200367829 + AluJb SINE Alu 1 298 -14 2736 249 32 78 chr4 1960518 1960943 -200367404 - L1ME3A LINE L1 -2615 3600 3283 2191 128 0 7 chr4 1960943 1961239 -200367108 + AluSg SINE Alu 1 294 -16 2736 249 32 78 chr4 1961239 1961473 -200366874 - L1ME3A LINE L1 -2932 3283 3040 1129 192 0 0 chr4 1961474 1961656 -200366691 - AluJo SINE Alu -10 302 121 438 173 0 37 chr4 1961732 1961813 -200366534 + AluSc SINE Alu 122 199 -110 659 118 0 0 chr4 1961815 1961908 -200366439 - AluJ/FLAM SINE Alu -218 94 2 1277 279 52 67 chr4 1961914 1961963 -200366384 - L1MEc LINE L1 -3184 3031 2983 607 180 62 23 chr4 1961963 1962091 -200366256 + FLAM_C SINE Alu 1 133 0 1277 279 52 67 chr4 1962091 1962146 -200366201 - L1MEc LINE L1 -3232 2983 2929 2663 49 3 0 chr4 1962146 1962454 -200365893 + AluY SINE Alu 1 309 -2 2163 139 0 3 chr4 1962462 1962765 -200365582 + AluSx SINE Alu 1 302 -10 1277 279 52 67 chr4 1962765 1962948 -200365399 - L1MEc LINE L1 -3293 2922 2738 1710 204 10 0 chr4 1962948 1963257 -200365090 - AluJo SINE Alu 0 312 1 1277 279 52 67 chr4 1963257 1963287 -200365060 - L1MEc LINE L1 -3477 2738 2709 1890 109 81 21 chr4 1963287 1963570 -200364777 + AluSx SINE Alu 5 304 -8 1277 279 52 67 chr4 1963570 1964366 -200363981 - L1MEc LINE L1 -3506 2709 1945 1877 137 28 11 chr4 1964491 1964775 -200363572 - AluJo SINE Alu -23 289 1 925 257 63 86 chr4 1964786 1964979 -200363368 - L1MEc LINE L1 -4634 1762 1566 2043 123 44 0 chr4 1964979 1965272 -200363075 - AluSx SINE Alu -6 306 1 925 257 63 86 chr4 1965272 1965868 -200362479 - L1MEc LINE L1 -4830 1566 991 1964 154 6 40 chr4 1965881 1966205 -200362142 - 7SLRNA srpRNA srpRNA -6 314 2 2146 116 0 0 chr4 1966385 1966669 -200361678 - AluY SINE Alu -5 306 23 2345 112 3 10 chr4 1966673 1966987 -200361360 - AluSx SINE Alu 0 312 1 2317 112 3 0 chr4 1967326 1967631 -200360716 - AluSx SINE Alu -6 306 1 2022 89 4 0 chr4 1967975 1968223 -200360124 + AluSx SINE Alu 1 249 -63 878 163 42 48 chr4 1968462 1968628 -200359719 + AluJo SINE Alu 6 170 -142 283 309 0 0 chr4 1969493 1969577 -200358770 + (TGG)n Simple_repeat Simple_repeat 1 84 0 3570 189 83 28 chr4 1972297 1973242 -200355105 - L1MB5 LINE L1 0 6174 5152 3394 22 0 0 chr4 1973242 1973652 -200354695 - L1PA2 LINE L1 0 6155 5746 3570 189 83 28 chr4 1973652 1973764 -200354583 - L1MB5 LINE L1 -1022 5152 5048 1482 168 111 0 chr4 1973765 1974062 -200354285 - MLT2D LTR ERVL -8 406 77 1684 203 30 0 chr4 1975292 1975592 -200352755 - AluJo SINE Alu -3 309 1 6880 146 39 58 chr4 1975615 1976666 -200351681 - L1 LINE L1 -845 5301 4232 2238 110 0 0 chr4 1976666 1976948 -200351399 + AluSg SINE Alu 1 282 -28 522 0 0 0 chr4 1976948 1977006 -200351341 + (TA)n Simple_repeat Simple_repeat 2 59 0 6880 146 39 58 chr4 1977006 1977478 -200350869 - L1 LINE L1 -1912 4234 3805 4333 170 60 9 chr4 1977477 1978372 -200349975 + L1MA7 LINE L1 5341 6281 -10 * 615 126 0 0 chr4 1978390 1978485 -200349862 - MLT2D LTR ERVL -319 95 1 2327 211 27 9 chr4 1978516 1979075 -200349272 - L1MB5 LINE L1 -1188 4958 4390 821 110 0 0 chr4 1979106 1979233 -200349114 + L1MB4 LINE L1 5786 5912 -271 311 145 87 0 chr4 1979264 1979333 -200349014 + L1MB4 LINE L1 6106 6180 0 250 288 16 24 chr4 1979482 1979607 -200348740 - L1ME LINE L1 -325 5796 5673 901 203 52 48 chr4 1979728 1979979 -200348368 + L1MB8 LINE L1 5914 6165 -13 237 253 6 69 chr4 1980163 1980337 -200348010 + GA-rich Low_complexity Low_complexity 3 165 0 367 243 0 42 chr4 1980734 1980878 -200347469 + GA-rich Low_complexity Low_complexity 2 139 0 715 179 0 0 chr4 1981058 1981175 -200347172 + FLAM_C SINE Alu 2 118 -25 185 32 0 65 chr4 1981190 1981221 -200347126 + (TAAAAA)n Simple_repeat Simple_repeat 2 30 0 192 314 0 0 chr4 1982264 1982315 -200346032 + L2 LINE L2 3258 3308 -5 342 344 0 16 chr4 1982850 1983033 -200345314 + C-rich Low_complexity Low_complexity 1 180 0 261 55 0 73 chr4 1984435 1984490 -200343857 + (CCCCCT)n Simple_repeat Simple_repeat 2 52 0 994 224 117 13 chr4 1984850 1985149 -200343198 + LTR53 LTR ERVL 190 519 0 217 203 51 13 chr4 1986363 1986521 -200341826 + (AGGTG)n Simple_repeat Simple_repeat 3 166 0 182 224 48 0 chr4 1986537 1986684 -200341663 + (TGAG)n Simple_repeat Simple_repeat 3 156 0 1543 161 51 11 chr4 1987225 1987498 -200340849 + AluJo SINE Alu 5 288 -24 1996 128 0 17 chr4 1987928 1988242 -200340105 + AluSx SINE Alu 1 309 0 1855 119 51 10 chr4 1988437 1988731 -200339616 - AluY SINE Alu -2 309 4 342 139 0 0 chr4 1989512 1989584 -200338763 + (GGGGA)n Simple_repeat Simple_repeat 2 73 0 194 195 24 0 chr4 1990641 1990682 -200337665 + MIR SINE MIR 108 149 -113 2090 108 0 0 chr4 1991360 1991628 -200336719 + AluSx SINE Alu 1 268 -44 928 186 0 0 chr4 1992018 1992179 -200336168 - FRAM SINE Alu -14 162 2 411 241 15 53 chr4 1992799 1992932 -200335415 - L1ME LINE L1 -457 5664 5537 22 35 0 0 chr4 1993097 1993126 -200335221 + AT_rich Low_complexity Low_complexity 1 29 0 375 215 84 9 chr4 1993454 1993561 -200334786 + L2 LINE L2 3187 3301 -12 6318 226 64 42 chr4 1993561 1994237 -200334110 + L1MEc LINE L1 34 693 -5522 2368 99 3 13 chr4 1994237 1994551 -200333796 + AluSp SINE Alu 1 311 -2 2258 80 42 3 chr4 1994552 1994840 -200333507 + AluY SINE Alu 1 299 -12 6318 226 64 42 chr4 1994840 1995669 -200332678 + L1MEc LINE L1 693 1502 -4713 2441 71 0 43 chr4 1995669 1995993 -200332354 + AluY SINE Alu 1 310 -1 6318 226 64 42 chr4 1995993 1998267 -200330080 + L1MEc LINE L1 1502 3924 -2291 286 254 17 1 chr4 1998280 1998356 -200329991 + MER5B DNA MER1_type 75 163 -26 246 299 56 56 chr4 1998644 1998751 -200329596 + MIR3 SINE MIR 95 201 -7 2123 36 4 4 chr4 1998877 1999151 -200329196 + L1PA3 LINE L1 5880 6153 -2 232 250 140 20 chr4 1999195 1999295 -200329052 - L2 LINE L2 -9 3304 3193 1016 217 165 37 chr4 1999353 1999649 -200328698 + L1MEc LINE L1 3908 4270 -1945 345 24 0 0 chr4 1999649 1999691 -200328656 + (CA)n Simple_repeat Simple_repeat 2 43 0 1016 217 165 37 chr4 1999691 1999795 -200328552 + L1MEc LINE L1 4270 4359 -1856 2690 46 0 0 chr4 1999807 2000113 -200328234 + AluY SINE Alu 1 306 -5 3314 197 45 38 chr4 2000114 2000951 -200327396 + MER21B LTR ERV1 1 843 -20 330 241 0 0 chr4 2000969 2001056 -200327291 + L1MEc LINE L1 4354 4440 -1775 2192 105 0 0 chr4 2001056 2001333 -200327014 + AluSx SINE Alu 1 277 -35 971 203 30 0 chr4 2001333 2001530 -200326817 - MER21B LTR ERV1 -194 669 467 1021 209 67 4 chr4 2001580 2001805 -200326542 + MER8 DNA MER2_type 1 239 0 256 219 0 41 chr4 2001999 2002072 -200326275 + GA-rich Low_complexity Low_complexity 1 70 0 2425 105 0 0 chr4 2004078 2004383 -200323964 - AluSq SINE Alu -8 305 1 585 0 0 0 chr4 2004823 2004888 -200323459 + (TA)n Simple_repeat Simple_repeat 1 65 0 22 0 0 0 chr4 2004870 2004892 -200323455 + AT_rich Low_complexity Low_complexity 1 22 0 2362 109 0 0 chr4 2004894 2005197 -200323150 - AluSg SINE Alu -7 303 1 1862 163 3 3 chr4 2005207 2005495 -200322852 - AluJo SINE Alu -24 288 1 1915 124 0 59 chr4 2006478 2006785 -200321562 - AluSx SINE Alu -22 290 2 384 376 6 0 chr4 2007737 2007899 -200320448 + (TG)n Simple_repeat Simple_repeat 1 163 0 1493 185 10 89 chr4 2008288 2008399 -200319948 + MLT1B LTR MaLR 1 119 -271 1814 148 0 43 chr4 2008399 2008558 -200319789 - AluJo SINE Alu -20 292 151 2326 80 0 22 chr4 2008558 2008870 -200319477 - AluY SINE Alu -6 305 1 1814 148 0 43 chr4 2008870 2009015 -200319332 - AluJo SINE Alu -161 151 1 1493 185 10 89 chr4 2009015 2009309 -200319038 + MLT1B LTR MaLR 119 374 -16 444 67 0 0 chr4 2009979 2010039 -200318308 + (CA)n Simple_repeat Simple_repeat 1 60 0 1668 190 122 117 chr4 2012826 2013399 -200314948 + MER70B LTR ERVL 1 576 -2 322 324 41 14 chr4 2013402 2013547 -200314800 - MIR SINE MIR -77 185 37 254 153 85 17 chr4 2017634 2017693 -200310654 - L1MB7 LINE L1 -10 6174 6112 739 104 0 0 chr4 2017720 2017826 -200310521 + FLAM_C SINE Alu 37 142 -1 1020 178 23 0 chr4 2017826 2018000 -200310347 + AluJb SINE Alu 105 282 -30 2871 198 96 14 chr4 2018000 2018721 -200309626 - L1MB7 LINE L1 -57 6127 5348 900 221 82 41 chr4 2019092 2019440 -200308907 + MLT1C LTR MaLR 42 411 -56 2312 101 3 0 chr4 2019457 2019765 -200308582 - AluSc SINE Alu 0 309 1 191 36 36 0 chr4 2021265 2021293 -200307054 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 1201 98 6 0 chr4 2072736 2072900 -200255447 + AluSp SINE Alu 58 222 -91 850 140 0 14 chr4 2072905 2073048 -200255299 + AluSc SINE Alu 164 304 -5 2193 97 0 0 chr4 2073137 2073426 -200254921 - AluSc SINE Alu -12 297 9 1926 96 0 83 chr4 2073524 2073708 -200254639 - AluSx SINE Alu -15 297 150 1929 125 31 0 chr4 2073708 2073995 -200254352 - AluSg SINE Alu -14 296 1 1926 96 0 83 chr4 2073995 2074134 -200254213 - AluSx SINE Alu -162 150 1 1933 126 3 7 chr4 2074775 2075076 -200253271 - AluSc SINE Alu -9 300 1 762 148 0 87 chr4 2075108 2075257 -200253090 + AluJb SINE Alu 4 139 -173 1956 122 0 46 chr4 2075265 2075592 -200252755 + AluSx SINE Alu 1 312 0 1184 216 7 49 chr4 2075972 2076110 -200252237 + AluJo SINE Alu 6 148 -164 2126 94 0 10 chr4 2076110 2076409 -200251938 + AluSg SINE Alu 1 296 -14 1184 216 7 49 chr4 2076409 2076576 -200251771 + AluJo SINE Alu 148 298 -14 730 247 105 34 chr4 2076632 2076677 -200251670 - L1ME3A LINE L1 -194 5972 5932 2379 75 0 0 chr4 2076677 2076982 -200251365 - AluSx SINE Alu -7 305 1 730 247 105 34 chr4 2076982 2077328 -200251019 - L1ME3A LINE L1 -234 5932 5556 1308 189 10 69 chr4 2077383 2077557 -200250790 - AluJo SINE Alu -24 288 138 2208 92 0 0 chr4 2077557 2077849 -200250498 + AluSg SINE Alu 1 292 -18 1308 189 10 69 chr4 2077849 2077980 -200250367 - AluJo SINE Alu -174 138 1 2236 208 86 88 chr4 2077991 2078646 -200249701 - L1ME1 LINE L1 -44 6122 5467 899 211 131 65 chr4 2078646 2078795 -200249552 - AluJo SINE Alu -9 293 155 1908 123 0 20 chr4 2078795 2079115 -200249232 + AluSq SINE Alu 1 314 0 899 211 131 65 chr4 2079115 2079239 -200249108 - AluJo SINE Alu -147 155 1 2236 208 86 88 chr4 2079239 2079275 -200249072 - L1ME1 LINE L1 -699 5467 5432 321 68 0 0 chr4 2079275 2079319 -200249028 + (TG)n Simple_repeat Simple_repeat 2 45 0 1973 129 3 0 chr4 2079320 2079614 -200248733 - AluSx SINE Alu -17 295 1 2236 208 86 88 chr4 2079614 2079761 -200248586 - L1ME1 LINE L1 -734 5432 5286 2177 91 7 0 chr4 2079761 2080059 -200248288 - AluSq SINE Alu -13 300 1 2236 208 86 88 chr4 2080059 2080155 -200248192 - L1ME1 LINE L1 -880 5286 5191 1926 148 0 0 chr4 2080155 2080445 -200247902 - AluSx SINE Alu -22 290 1 2236 208 86 88 chr4 2080445 2080611 -200247736 - L1ME1 LINE L1 -975 5191 5024 1972 126 7 10 chr4 2080613 2080923 -200247424 - AluSx SINE Alu -1 311 3 460 214 12 89 chr4 2080934 2081072 -200247275 - L1ME3A LINE L1 -965 5181 5057 2768 13 0 0 chr4 2081072 2081383 -200246964 - AluYa5 SINE Alu 0 311 1 460 214 12 89 chr4 2081383 2081412 -200246935 - L1ME3A LINE L1 -1089 5057 5027 2022 133 0 3 chr4 2081412 2081714 -200246633 - AluSg SINE Alu -9 301 1 1695 169 0 28 chr4 2081714 2082033 -200246314 - AluSx SINE Alu -1 311 1 544 247 45 56 chr4 2082037 2082115 -200246232 - L1ME3A LINE L1 -2274 3872 3795 2135 85 4 0 chr4 2082115 2082420 -200245927 - AluSp SINE Alu 0 309 4 2091 88 3 10 chr4 2082424 2082774 -200245573 - AluY SINE Alu 0 311 14 544 247 45 56 chr4 2082774 2082904 -200245443 - L1ME3A LINE L1 -2354 3792 3659 1272 181 17 0 chr4 2082904 2083136 -200245211 - MER46A DNA MER2_type 0 236 1 544 247 45 56 chr4 2083136 2083187 -200245160 - L1ME3A LINE L1 -2487 3659 3609 2304 223 106 66 chr4 2083202 2083516 -200244831 - L1ME3A LINE L1 -2734 3412 3112 1612 173 0 31 chr4 2083516 2083696 -200244651 - AluJo SINE Alu -2 310 143 2458 56 0 0 chr4 2083696 2083999 -200244348 - AluY SINE Alu -8 303 1 1612 173 0 31 chr4 2083999 2084136 -200244211 - AluJo SINE Alu -169 143 3 2304 223 106 66 chr4 2084136 2084221 -200244126 - L1ME3A LINE L1 -3034 3112 3032 2159 75 4 0 chr4 2084221 2084524 -200243823 - AluY SINE Alu 0 304 1 1812 151 10 3 chr4 2084531 2084835 -200243512 - AluSx SINE Alu -6 306 1 2304 223 106 66 chr4 2084835 2084871 -200243476 - L1ME3A LINE L1 -3119 3027 2994 814 206 6 24 chr4 2084871 2085036 -200243311 + FAM SINE Alu 1 162 -13 2304 223 106 66 chr4 2085036 2085061 -200243286 - L1ME3A LINE L1 -3152 2994 2971 2202 80 0 0 chr4 2085061 2085350 -200242997 - AluSc SINE Alu -4 305 17 2304 223 106 66 chr4 2085350 2085382 -200242965 - L1ME3A LINE L1 -3175 2971 2942 2002 138 51 28 chr4 2085382 2085738 -200242609 + THE1B LTR MaLR 1 364 0 2304 223 106 66 chr4 2085738 2085770 -200242577 - L1ME3A LINE L1 -3204 2942 2913 2008 120 0 3 chr4 2085770 2086071 -200242276 - AluSg SINE Alu -10 300 1 2304 223 106 66 chr4 2086071 2086673 -200241674 - L1ME3A LINE L1 -3233 2913 2226 299 173 0 19 chr4 2087020 2087072 -200241275 + Alu SINE Alu 2 52 -251 1498 166 6 110 chr4 2087185 2087296 -200241051 + AluJb SINE Alu 2 123 -179 2181 82 3 0 chr4 2087296 2087588 -200240759 - AluY SINE Alu -3 308 16 1898 115 31 0 chr4 2087596 2087883 -200240464 - AluSq SINE Alu -17 296 1 1498 166 6 110 chr4 2087883 2087898 -200240449 + AluJb SINE Alu 130 145 -157 2111 89 10 3 chr4 2087898 2088191 -200240156 - AluSc SINE Alu -14 295 1 1498 166 6 110 chr4 2088191 2088380 -200239967 + AluJb SINE Alu 145 293 -9 403 92 0 0 chr4 2088601 2088666 -200239681 - L1MC3 LINE L1 0 7785 7721 1840 149 24 24 chr4 2088666 2088995 -200239352 - MER44D DNA MER2_type 0 609 11 846 181 99 45 chr4 2089020 2089241 -200239106 - L1MD3 LINE L1 -67 7928 7696 2189 92 0 7 chr4 2089358 2089652 -200238695 + AluSc SINE Alu 1 292 -17 1937 136 13 7 chr4 2089678 2089988 -200238359 + AluSx SINE Alu 1 312 0 1086 216 7 33 chr4 2090103 2090376 -200237971 - AluJo SINE Alu -46 266 1 1862 143 10 3 chr4 2090405 2090706 -200237641 + AluSx SINE Alu 1 303 -9 287 234 9 56 chr4 2090890 2090997 -200237350 - MIR3 SINE MIR -1 207 106 876 222 0 0 chr4 2091119 2091281 -200237066 - AluJ SINE Alu -4 298 137 2058 92 58 3 chr4 2091634 2091929 -200236418 - AluSq SINE Alu -2 311 1 809 140 0 37 chr4 2092503 2092639 -200235708 - AluJ SINE Alu -181 131 1 1843 147 3 7 chr4 2092869 2093169 -200235178 - AluSx SINE Alu -13 299 1 2247 95 0 0 chr4 2093180 2093484 -200234863 - AluSx SINE Alu -8 304 1 281 310 14 0 chr4 2093734 2093805 -200234542 + MIR3 SINE MIR 114 185 -23 1573 160 11 14 chr4 2093853 2094135 -200234212 + AluJo SINE Alu 1 281 -31 2133 106 3 0 chr4 2094311 2094614 -200233733 - AluSg SINE Alu -5 305 2 2351 88 0 0 chr4 2094622 2094930 -200233417 - AluSg SINE Alu -2 308 1 646 169 113 8 chr4 2095111 2095235 -200233112 + FLAM_C SINE Alu 3 139 -4 1210 238 127 19 chr4 2095259 2095670 -200232677 + Charlie7 DNA MER1_type 409 863 -1749 1608 148 34 17 chr4 2095780 2096071 -200232276 - AluJb SINE Alu -16 296 1 3151 203 116 93 chr4 2096310 2096484 -200231863 + Charlie7 DNA MER1_type 926 1095 -1517 1399 144 59 46 chr4 2096484 2096789 -200231558 - AluJo SINE Alu -3 309 1 3151 203 116 93 chr4 2096789 2096943 -200231404 + Charlie7 DNA MER1_type 1095 1244 -1368 2051 114 7 10 chr4 2096943 2097249 -200231098 - AluSc SINE Alu -4 305 1 3151 203 116 93 chr4 2097249 2097745 -200230602 + Charlie7 DNA MER1_type 1244 1727 -885 2308 75 0 0 chr4 2097745 2098040 -200230307 - AluY SINE Alu -16 295 1 3151 203 116 93 chr4 2098040 2098101 -200230246 + Charlie7 DNA MER1_type 1727 1785 -827 2076 103 10 3 chr4 2098101 2098393 -200229954 + AluSx SINE Alu 1 294 -18 3151 203 116 93 chr4 2098393 2098626 -200229721 + Charlie7 DNA MER1_type 1785 2011 -601 2414 51 0 29 chr4 2098626 2098941 -200229406 - AluY SINE Alu -5 306 1 3151 203 116 93 chr4 2098941 2099359 -200228988 + Charlie7 DNA MER1_type 2011 2501 -111 873 184 13 0 chr4 2100067 2100225 -200228122 + FRAM SINE Alu 1 160 -16 1886 127 37 3 chr4 2100661 2100961 -200227386 - AluSx SINE Alu -2 310 1 1574 156 10 27 chr4 2101204 2101499 -200226848 - AluJo SINE Alu -22 290 1 784 157 0 0 chr4 2103241 2103362 -200224985 - AluSg/x SINE Alu -18 294 174 1572 184 10 16 chr4 2103544 2103854 -200224493 - AluJb SINE Alu -2 310 3 1871 170 89 6 chr4 2103854 2104201 -200224146 + MSTB1 LTR MaLR 57 432 0 510 319 42 78 chr4 2104225 2104314 -200224033 + L1M4 LINE L1 4651 4742 -1404 1727 170 3 3 chr4 2104314 2104608 -200223739 + AluJo SINE Alu 1 294 -18 510 319 42 78 chr4 2104608 2104904 -200223443 + L1M4 LINE L1 4742 5022 -1124 1046 204 25 4 chr4 2105374 2105609 -200222738 + AluSx SINE Alu 61 300 -12 1378 130 51 16 chr4 2105609 2105862 -200222485 + L1MA5 LINE L1 6037 6298 -2 2209 78 0 7 chr4 2105921 2106214 -200222133 + AluSc SINE Alu 1 291 -18 664 165 51 173 chr4 2106214 2106468 -200221879 - L1ME LINE L1 -347 5819 5597 2000 109 3 7 chr4 2106470 2106754 -200221593 - AluSg SINE Alu -14 296 14 2259 76 3 3 chr4 2106754 2107055 -200221292 - AluY SINE Alu -10 301 1 1749 155 7 17 chr4 2107059 2107356 -200220991 - AluJb SINE Alu -7 305 12 603 199 99 53 chr4 2107369 2107651 -200220696 - L1ME LINE L1 -1446 4700 4406 400 305 104 11 chr4 2107908 2108187 -200220160 - L2 LINE L2 -466 2848 2544 2050 96 4 4 chr4 2108484 2108765 -200219582 + AluSx SINE Alu 1 281 -31 195 42 0 0 chr4 2108769 2108793 -200219554 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 301 250 21 31 chr4 2108793 2108875 -200219472 + L1M4 LINE L1 3793 3875 -2271 1517 187 3 23 chr4 2108875 2109174 -200219173 + AluSx SINE Alu 1 293 -19 301 250 21 31 chr4 2109174 2109187 -200219160 + L1M4 LINE L1 3875 3887 -2259 2009 84 7 7 chr4 2109893 2110168 -200218179 - AluSx SINE Alu -12 300 26 281 26 26 0 chr4 2110186 2110224 -200218123 + (TTA)n Simple_repeat Simple_repeat 2 40 0 1670 143 0 38 chr4 2110231 2110389 -200217958 - AluJo SINE Alu -36 276 132 2316 68 0 7 chr4 2110389 2110685 -200217662 + AluY SINE Alu 1 294 -17 1670 143 0 38 chr4 2110685 2110813 -200217534 - AluJo SINE Alu -180 132 1 2717 10 3 3 chr4 2110837 2111148 -200217199 + AluYa5 SINE Alu 1 311 0 764 69 20 0 chr4 2111157 2111259 -200217088 + AluSq/x SINE Alu 1 104 -209 2017 97 20 20 chr4 2111455 2111755 -200216592 + AluSq SINE Alu 1 300 -13 263 224 40 13 chr4 2111862 2111938 -200216409 - MLT1K LTR MaLR -63 525 448 1364 187 128 8 chr4 2112332 2112774 -200215573 + MLT1H LTR MaLR 1 541 -8 1858 112 62 0 chr4 2113277 2113553 -200214794 - AluSq SINE Alu -20 293 1 1284 189 4 60 chr4 2113554 2113742 -200214605 - AluJo SINE Alu -13 299 131 2288 59 3 3 chr4 2113742 2114029 -200214318 + AluY SINE Alu 15 301 -10 1284 189 4 60 chr4 2114029 2114121 -200214226 - AluJo SINE Alu -181 131 35 275 273 20 40 chr4 2114973 2115123 -200213224 - L2 LINE L2 -212 3060 2914 1738 104 8 8 chr4 2115326 2115576 -200212771 + AluSg SINE Alu 55 304 -6 26 30 0 0 chr4 2115635 2115668 -200212679 + AT_rich Low_complexity Low_complexity 1 33 0 208 106 21 43 chr4 2115845 2115892 -200212455 + (CCCG)n Simple_repeat Simple_repeat 2 47 0 229 195 37 24 chr4 2116430 2116512 -200211835 + Zaphod DNA AcHobo 9 91 -3940 1894 105 22 0 chr4 2117122 2117399 -200210948 + AluSp SINE Alu 13 295 -18 2166 92 0 19 chr4 2117399 2117716 -200210631 + AluY SINE Alu 1 311 0 1797 99 106 4 chr4 2117730 2118003 -200210344 + AluSx SINE Alu 1 301 -11 618 174 31 68 chr4 2118003 2118164 -200210183 + L1MA5 LINE L1 5756 5910 -390 1954 105 3 14 chr4 2118171 2118467 -200209880 - AluSg SINE Alu 0 310 18 1397 113 32 0 chr4 2118620 2118841 -200209506 - AluSq SINE Alu -85 228 1 1617 91 0 13 chr4 2118843 2119022 -200209325 - AluY SINE Alu -1 310 133 2326 38 3 14 chr4 2119022 2119332 -200209015 - AluY SINE Alu 0 311 1 1617 91 0 13 chr4 2119332 2119383 -200208964 - AluY SINE Alu -178 133 83 2013 110 0 60 chr4 2119385 2119703 -200208644 - AluSq SINE Alu -14 299 1 1307 187 56 21 chr4 2119813 2120097 -200208250 + AluJo SINE Alu 1 294 -18 438 300 8 8 chr4 2120155 2120275 -200208072 + FLAM_A SINE Alu 5 124 -9 1956 129 3 13 chr4 2120327 2120636 -200207711 + AluSg SINE Alu 1 306 -4 2263 60 30 13 chr4 2121026 2121327 -200207020 + AluSx SINE Alu 1 306 -6 429 103 0 0 chr4 2122336 2122394 -200205953 - AluJ/FLAM SINE Alu -253 59 2 292 162 88 0 chr4 2122760 2122828 -200205519 + Tigger5 DNA MER2_type 2250 2323 0 188 355 81 17 chr4 2123051 2123223 -200205124 + L2 LINE L2 2569 2751 -563 185 289 289 0 chr4 2124005 2124095 -200204252 - L2 LINE L2 0 3313 3198 197 294 128 0 chr4 2124116 2124218 -200204129 - L2 LINE L2 -875 2439 2325 533 275 54 45 chr4 2124277 2124499 -200203848 + MIR SINE MIR 7 230 -32 1382 184 0 44 chr4 2125414 2125539 -200202808 - AluJb SINE Alu -53 259 130 2126 115 0 7 chr4 2125539 2125844 -200202503 - AluSx SINE Alu -1 311 9 1382 184 0 44 chr4 2125844 2125989 -200202358 - AluJb SINE Alu -182 130 1 1956 97 39 4 chr4 2126447 2126749 -200201598 + AluSx SINE Alu 1 312 0 505 248 81 6 chr4 2126880 2127041 -200201306 - MIR SINE MIR -6 256 84 2059 105 26 10 chr4 2127076 2127380 -200200967 - AluSq SINE Alu -4 309 1 227 237 96 25 chr4 2127722 2127858 -200200489 + MER5A DNA MER1_type 1 188 -1 1230 171 93 8 chr4 2129088 2129345 -200199002 + AluJo SINE Alu 1 279 -33 777 153 15 0 chr4 2129504 2129635 -200198712 - AluSg/x SINE Alu -12 298 166 285 268 89 18 chr4 2133439 2133551 -200194796 - MLT1K LTR MaLR -2 586 467 305 282 39 0 chr4 2133628 2133706 -200194641 - MLT1K LTR MaLR -342 246 166 319 334 112 25 chr4 2133813 2134044 -200194303 + L2 LINE L2 2973 3239 -74 2045 127 10 0 chr4 2134044 2134377 -200193970 - AluSx SINE Alu 0 312 1 319 334 112 25 chr4 2134377 2134459 -200193888 + L2 LINE L2 3239 3313 0 635 215 6 0 chr4 2134459 2134631 -200193716 + (TGGA)n Simple_repeat Simple_repeat 2 174 0 790 206 6 1 chr4 2134656 2135357 -200192990 + (TGGA)n Simple_repeat Simple_repeat 1 704 0 972 198 9 5 chr4 2135390 2135836 -200192511 + (TGGA)n Simple_repeat Simple_repeat 1 448 0 372 295 94 18 chr4 2136217 2136441 -200191906 - L2 LINE L2 -229 3084 2844 286 273 161 14 chr4 2136533 2136819 -200191528 - L2 LINE L2 -739 2575 2248 205 188 0 42 chr4 2137488 2137536 -200190811 + G-rich Low_complexity Low_complexity 6 51 0 699 181 24 0 chr4 2138569 2138696 -200189651 + Tigger1 DNA MER2_type 2079 2208 -210 1030 172 17 67 chr4 2138696 2138859 -200189488 - AluJo SINE Alu -13 299 129 207 0 0 0 chr4 2138859 2138882 -200189465 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2194 78 0 0 chr4 2138882 2139165 -200189182 - AluY SINE Alu -28 283 1 1030 172 17 67 chr4 2139165 2139238 -200189109 - AluJo SINE Alu -181 131 74 425 245 86 15 chr4 2139292 2139446 -200188901 - MIR SINE MIR -83 179 16 2064 106 13 3 chr4 2139915 2140217 -200188130 - AluSg SINE Alu -5 305 1 537 176 0 42 chr4 2140224 2140343 -200188004 - FAM SINE Alu 0 185 72 327 256 34 0 chr4 2140343 2140373 -200187974 - AluJo/F(R)AM SINE Alu -78 224 196 1640 128 0 0 chr4 2140373 2140608 -200187739 - AluSx SINE Alu -77 235 1 327 256 34 0 chr4 2140608 2140678 -200187669 - AluJo/F(R)AM SINE Alu -106 196 154 2135 112 52 60 chr4 2140678 2140831 -200187516 + THE1B LTR MaLR 1 154 -210 1983 139 3 0 chr4 2140831 2141125 -200187222 + AluSg SINE Alu 1 295 -15 2135 112 52 60 chr4 2141125 2141338 -200187009 + THE1B LTR MaLR 154 364 0 12005 89 9 6 chr4 2141338 2142914 -200185433 + THE1B-int LTR MaLR 1 1580 0 2317 92 66 20 chr4 2142914 2143262 -200185085 + THE1B LTR MaLR 1 364 0 1582 120 14 58 chr4 2143491 2143766 -200184581 - AluJb SINE Alu -49 263 1 2092 121 0 0 chr4 2143793 2144082 -200184265 - AluSx SINE Alu -9 303 15 1362 139 0 9 chr4 2145233 2145449 -200182898 - AluJb SINE Alu -14 298 85 360 335 54 6 chr4 2146592 2146759 -200181588 + L2 LINE L2 3139 3313 0 213 211 57 0 chr4 2146844 2146908 -200181439 - MIR SINE MIR -69 139 70 2035 128 0 0 chr4 2147048 2147336 -200181011 + AluSx SINE Alu 4 291 -21 2002 111 26 7 chr4 2147343 2147650 -200180697 - AluSq SINE Alu 0 313 1 976 103 109 0 chr4 2147650 2147824 -200180523 + Tigger3(Golem) DNA MER2_type 2765 2957 -72 2148 86 0 10 chr4 2147928 2148220 -200180127 - AluSp SINE Alu -11 302 14 9541 116 57 124 chr4 2148224 2148574 -200179773 - Tigger1 DNA MER2_type -318 2100 1728 2107 94 0 29 chr4 2148574 2148881 -200179466 - AluSc SINE Alu -11 298 1 1520 126 0 37 chr4 2148882 2149128 -200179219 - AluSx SINE Alu -18 294 58 9541 116 57 124 chr4 2149128 2149153 -200179194 - Tigger1 DNA MER2_type -690 1728 1703 1816 103 17 17 chr4 2149153 2149443 -200178904 - AluSg1 SINE Alu -19 290 1 9541 116 57 124 chr4 2149443 2149581 -200178766 - Tigger1 DNA MER2_type -715 1703 1557 1980 115 7 7 chr4 2149581 2149867 -200178480 - AluSx SINE Alu -19 293 8 9541 116 57 124 chr4 2149867 2149913 -200178434 - Tigger1 DNA MER2_type -861 1557 1509 2273 80 3 0 chr4 2149913 2150212 -200178135 - AluY SINE Alu -9 302 3 9541 116 57 124 chr4 2150212 2150354 -200177993 - Tigger1 DNA MER2_type -909 1509 1359 793 128 0 94 chr4 2150354 2150503 -200177844 - FLAM_C SINE Alu -7 136 2 9541 116 57 124 chr4 2150503 2151707 -200176640 - Tigger1 DNA MER2_type -1059 1359 199 2159 115 0 3 chr4 2151707 2152011 -200176336 + AluSx SINE Alu 1 303 -9 9541 116 57 124 chr4 2152011 2152175 -200176172 - Tigger1 DNA MER2_type -2219 199 26 185 182 164 0 chr4 2152224 2152279 -200176068 + L2 LINE L2 3232 3295 -18 386 267 80 13 chr4 2152310 2152460 -200175887 + MER106B DNA MER1_type 896 1055 -4 363 235 0 24 chr4 2152702 2152787 -200175560 + MIR SINE MIR 50 132 -76 1863 80 0 20 chr4 2154791 2155041 -200173306 - AluSq SINE Alu -68 245 1 2447 31 0 28 chr4 2155240 2155558 -200172789 - AluY SINE Alu 0 310 1 1779 166 0 35 chr4 2155558 2155872 -200172475 - AluJb SINE Alu -9 303 1 1573 171 27 40 chr4 2156166 2156464 -200171883 + AluJb SINE Alu 1 294 -18 1376 147 9 0 chr4 2156609 2156820 -200171527 + AluJo SINE Alu 86 298 -14 209 162 54 0 chr4 2156965 2157002 -200171345 + MER5A DNA MER1_type 64 102 -87 1170 153 16 0 chr4 2158000 2158190 -200170157 - AluJb SINE Alu 0 312 120 2176 82 43 4 chr4 2159162 2159442 -200168905 + AluSc SINE Alu 14 304 -5 362 306 94 25 chr4 2159452 2159687 -200168660 + L1MC4 LINE L1 7699 7949 -93 298 211 0 0 chr4 2161702 2161754 -200166593 + MLT1C LTR MaLR 416 467 0 309 277 10 10 chr4 2161796 2161897 -200166450 + L1MC3 LINE L1 7683 7783 -2 240 294 44 50 chr4 2162161 2162311 -200166036 + MIR SINE MIR 18 166 -62 1875 151 34 0 chr4 2162927 2163219 -200165128 + AluJo SINE Alu 1 302 -10 2392 85 3 0 chr4 2163351 2163646 -200164701 + AluSp SINE Alu 1 296 -17 846 160 0 0 chr4 2163650 2163775 -200164572 - FLAM_C SINE Alu -18 125 1 822 177 15 0 chr4 2163837 2163967 -200164380 + AluSq/x SINE Alu 1 132 -180 305 375 59 8 chr4 2164013 2164269 -200164078 + L1MC4 LINE L1 6768 7036 -1006 1909 139 42 0 chr4 2164466 2164632 -200163715 - AluSx SINE Alu -13 299 115 210 37 0 0 chr4 2164632 2164659 -200163688 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1909 139 42 0 chr4 2164659 2164779 -200163568 - AluSx SINE Alu -197 115 1 355 261 68 72 chr4 2164806 2164970 -200163377 + L1MC4a LINE L1 5117 5280 -866 1569 183 73 0 chr4 2164970 2165244 -200163103 + AluJb SINE Alu 1 294 -18 2237 136 0 0 chr4 2165248 2165558 -200162789 + AluSx SINE Alu 1 310 -2 355 261 68 72 chr4 2165558 2165595 -200162752 + L1MC4a LINE L1 5283 5322 -824 862 114 46 51 chr4 2165610 2165733 -200162614 + L1MA8 LINE L1 6116 6239 -52 2207 111 0 33 chr4 2165733 2165869 -200162478 + AluSx SINE Alu 1 140 -172 2179 127 0 16 chr4 2165869 2166183 -200162164 + AluSg1 SINE Alu 1 309 0 2207 111 0 33 chr4 2166183 2166353 -200161994 + AluSx SINE Alu 140 297 -15 862 114 46 51 chr4 2166353 2166404 -200161943 + L1MA8 LINE L1 6239 6289 -2 691 284 34 30 chr4 2166445 2166741 -200161606 + L1MC4a LINE L1 5303 5599 -2209 260 249 184 40 chr4 2166891 2167087 -200161260 + L1MC4a LINE L1 5914 6163 -1645 2146 138 7 0 chr4 2167087 2167391 -200160956 - AluJb SINE Alu -6 306 1 260 249 184 40 chr4 2167391 2167471 -200160876 + L1MC4a LINE L1 6163 6230 -1578 331 176 71 188 chr4 2167838 2167940 -200160407 + L1ME3A LINE L1 5053 5165 -981 2134 122 3 3 chr4 2167940 2168235 -200160112 - AluSp SINE Alu -18 295 1 331 176 71 188 chr4 2168235 2168255 -200160092 + L1ME3A LINE L1 5165 5153 -993 2026 134 0 10 chr4 2168255 2168553 -200159794 - AluSx SINE Alu -17 295 1 331 176 71 188 chr4 2168553 2168599 -200159748 + L1ME3A LINE L1 5152 5202 -944 1151 274 114 34 chr4 2168627 2169244 -200159103 + L1ME3A LINE L1 5290 5985 -185 2417 94 3 0 chr4 2169244 2169551 -200158796 - AluSc SINE Alu -1 308 1 1151 274 114 34 chr4 2169551 2169724 -200158623 + L1ME3A LINE L1 5985 6143 -27 1311 99 6 0 chr4 2169754 2169926 -200158421 - AluSg/x SINE Alu -14 296 124 931 234 80 7 chr4 2169966 2170252 -200158095 + L1M4 LINE L1 4872 5178 -968 314 328 133 9 chr4 2170274 2170597 -200157750 + L1MCc LINE L1 -485 4294967173 -6031 253 291 53 82 chr4 2170843 2170922 -200157425 + L1MCc LINE L1 295 375 -5533 2081 116 19 35 chr4 2170922 2171232 -200157115 + AluSq SINE Alu 1 305 -8 253 291 53 82 chr4 2171232 2171358 -200156989 + L1MCc LINE L1 375 494 -5414 352 223 142 7 chr4 2171504 2171652 -200156695 + L1MCc LINE L1 1306 1465 -4961 194 159 45 0 chr4 2171706 2171750 -200156597 + GA-rich Low_complexity Low_complexity 3 48 0 1496 158 85 12 chr4 2171774 2172033 -200156314 + AluJo SINE Alu 14 291 -21 533 291 46 37 chr4 2172048 2172243 -200156104 + L1MCc LINE L1 1654 1846 -4761 2099 110 9 31 chr4 2172243 2172561 -200155786 + AluY SINE Alu 1 311 0 533 291 46 37 chr4 2172561 2172641 -200155706 + L1MCc LINE L1 1846 1924 -4683 2114 123 13 7 chr4 2172641 2172950 -200155397 + AluSx SINE Alu 1 311 -1 533 291 46 37 chr4 2172950 2173023 -200155324 + L1MCc LINE L1 1924 2006 -4601 2431 54 3 3 chr4 2173041 2173335 -200155012 - AluY SINE Alu -4 307 14 1708 171 17 38 chr4 2173359 2173703 -200154644 - MSTB LTR MaLR -49 377 41 4491 101 14 75 chr4 2173703 2174462 -200153885 - L1PA12 LINE L1 -9 6159 5447 1896 181 0 3 chr4 2174476 2174779 -200153568 - AluJb SINE Alu -10 302 1 1356 69 0 29 chr4 2174808 2174983 -200153364 - AluSx SINE Alu -142 170 1 733 149 0 41 chr4 2175034 2175155 -200153192 + FLAM_C SINE Alu 2 117 -26 452 108 0 0 chr4 2175159 2175224 -200153123 + AluJ/FRAM SINE Alu 230 294 -8 * 2044 123 131 44 chr4 2175219 2175625 -200152722 + Tigger2 DNA MER2_type 2278 2718 0 487 283 26 58 chr4 2175655 2175846 -200152501 + MIR SINE MIR 75 259 -3 815 174 84 7 chr4 2175968 2176123 -200152224 + AluJb SINE Alu 140 306 -6 319 297 14 0 chr4 2176187 2176261 -200152086 + L2 LINE L2 3198 3272 0 2227 133 0 0 chr4 2176477 2176785 -200151562 + AluSx SINE Alu 1 308 -4 297 95 0 0 chr4 2176998 2177040 -200151307 + Alu SINE Alu 254 295 -6 372 311 45 8 chr4 2177340 2177472 -200150875 + MIR SINE MIR 92 228 -34 346 230 0 58 chr4 2177530 2177617 -200150730 + AluSg/x SINE Alu 136 217 -83 824 204 14 0 chr4 2177631 2177778 -200150569 - FAM SINE Alu -36 149 1 2080 106 0 11 chr4 2177801 2178107 -200150240 + AluSg SINE Alu 3 305 0 2383 90 3 0 chr4 2178432 2178731 -200149616 + AluSx SINE Alu 2 301 -11 26 64 0 0 chr4 2179389 2179436 -200148911 + AT_rich Low_complexity Low_complexity 1 47 0 294 315 207 9 chr4 2179566 2179779 -200148568 + L2 LINE L2 2109 2363 -951 599 275 174 12 chr4 2180030 2180407 -200147940 + L2 LINE L2 2628 3060 -253 1571 97 14 0 chr4 2180945 2181152 -200147195 - AluSc SINE Alu -91 218 9 2100 93 0 83 chr4 2181250 2181434 -200146913 - AluSx SINE Alu -15 297 150 2073 125 31 0 chr4 2181434 2181721 -200146626 - AluSg SINE Alu -14 296 1 2100 93 0 83 chr4 2181721 2181860 -200146487 - AluSx SINE Alu -162 150 1 2080 126 3 7 chr4 2182500 2182801 -200145546 - AluSc SINE Alu -9 300 1 782 148 0 87 chr4 2182833 2182982 -200145365 + AluJb SINE Alu 4 139 -173 2123 122 3 40 chr4 2182990 2183311 -200145036 + AluSq SINE Alu 1 309 -4 1378 219 7 49 chr4 2183698 2183836 -200144511 + AluJo SINE Alu 6 148 -164 2268 94 0 10 chr4 2183836 2184135 -200144212 + AluSg SINE Alu 1 296 -14 1378 219 7 49 chr4 2184135 2184302 -200144045 + AluJo SINE Alu 148 298 -14 2421 79 7 0 chr4 2184403 2184706 -200143641 - AluSx SINE Alu -7 305 1 677 246 102 29 chr4 2184734 2185047 -200143300 - L1ME3A LINE L1 -273 5897 5562 1449 189 10 69 chr4 2185107 2185281 -200143066 - AluJo SINE Alu -24 288 138 2351 92 0 0 chr4 2185281 2185573 -200142774 + AluSg SINE Alu 1 292 -18 1449 189 10 69 chr4 2185573 2185704 -200142643 - AluJo SINE Alu -174 138 1 2088 201 89 99 chr4 2185715 2186370 -200141977 - L1ME1 LINE L1 -44 6122 5462 949 211 131 65 chr4 2186370 2186519 -200141828 - AluJo SINE Alu -9 293 155 1957 120 10 24 chr4 2186519 2186837 -200141510 + AluSq SINE Alu 1 314 0 949 211 131 65 chr4 2186837 2186961 -200141386 - AluJo SINE Alu -147 155 1 2088 201 89 99 chr4 2186961 2186997 -200141350 - L1ME1 LINE L1 -704 5462 5427 321 68 0 0 chr4 2186997 2187041 -200141306 + (TG)n Simple_repeat Simple_repeat 2 45 0 2040 125 4 0 chr4 2187042 2187322 -200141025 - AluSx SINE Alu -17 295 15 2088 201 89 99 chr4 2187322 2187481 -200140866 - L1ME1 LINE L1 -739 5427 5268 2331 90 7 0 chr4 2187481 2187780 -200140567 - AluSq SINE Alu -12 301 1 2088 201 89 99 chr4 2187780 2187871 -200140476 - L1ME1 LINE L1 -898 5268 5178 1998 157 3 0 chr4 2187871 2188165 -200140182 - AluSx SINE Alu -17 295 1 2088 201 89 99 chr4 2188165 2188331 -200140016 - L1ME1 LINE L1 -988 5178 5024 2092 125 6 13 chr4 2188333 2188644 -200139703 - AluSx SINE Alu -1 311 3 429 214 12 89 chr4 2188655 2188793 -200139554 - L1ME3A LINE L1 -965 5181 5057 2856 16 3 0 chr4 2188793 2189103 -200139244 - AluYa5 SINE Alu 0 311 1 429 214 12 89 chr4 2189103 2189132 -200139215 - L1ME3A LINE L1 -1089 5057 5027 2172 133 0 3 chr4 2189132 2189434 -200138913 - AluSg SINE Alu -9 301 1 1851 169 0 28 chr4 2189434 2189753 -200138594 - AluSx SINE Alu -1 311 1 466 266 38 49 chr4 2189757 2189835 -200138512 - L1ME3A LINE L1 -2274 3872 3795 2258 89 4 0 chr4 2189835 2190140 -200138207 - AluSp SINE Alu 0 309 4 2266 85 3 10 chr4 2190144 2190494 -200137853 - AluY SINE Alu 0 311 14 466 266 38 49 chr4 2190494 2190624 -200137723 - L1ME3A LINE L1 -2354 3792 3659 1281 181 17 0 chr4 2190624 2190856 -200137491 - MER46A DNA MER2_type 0 236 1 466 266 38 49 chr4 2190856 2190907 -200137440 - L1ME3A LINE L1 -2487 3659 3609 2195 227 109 66 chr4 2190922 2191236 -200137111 - L1ME3A LINE L1 -2734 3412 3113 1760 172 0 35 chr4 2191236 2191416 -200136931 - AluJo SINE Alu -2 310 144 2592 56 0 0 chr4 2191416 2191718 -200136629 - AluY SINE Alu -9 302 1 1760 172 0 35 chr4 2191718 2191856 -200136491 - AluJo SINE Alu -168 144 3 2195 227 109 66 chr4 2191856 2191941 -200136406 - L1ME3A LINE L1 -3033 3113 3033 2313 68 4 0 chr4 2191941 2192244 -200136103 - AluY SINE Alu 0 304 1 1961 151 10 3 chr4 2192251 2192555 -200135792 - AluSx SINE Alu -6 306 1 2195 227 109 66 chr4 2192555 2192591 -200135756 - L1ME3A LINE L1 -3118 3028 2995 844 208 6 24 chr4 2192591 2192759 -200135588 + FAM SINE Alu 1 165 -10 2195 227 109 66 chr4 2192759 2192781 -200135566 - L1ME3A LINE L1 -3151 2995 2975 2283 83 3 0 chr4 2192781 2193069 -200135278 - AluSc SINE Alu -4 305 17 2195 227 109 66 chr4 2193069 2193101 -200135246 - L1ME3A LINE L1 -3171 2975 2946 2029 138 51 28 chr4 2193101 2193457 -200134890 + THE1B LTR MaLR 1 364 0 2195 227 109 66 chr4 2193457 2193489 -200134858 - L1ME3A LINE L1 -3200 2946 2917 2208 113 0 3 chr4 2193489 2193790 -200134557 - AluSg SINE Alu -10 300 1 2195 227 109 66 chr4 2193790 2194392 -200133955 - L1ME3A LINE L1 -3229 2917 2226 275 173 0 19 chr4 2194739 2194791 -200133556 + Alu SINE Alu 2 52 -247 1546 172 3 107 chr4 2194904 2195015 -200133332 + AluJb SINE Alu 2 123 -179 2268 83 10 0 chr4 2195015 2195305 -200133042 - AluY SINE Alu -3 308 16 2037 115 31 0 chr4 2195313 2195600 -200132747 - AluSq SINE Alu -17 296 1 1546 172 3 107 chr4 2195600 2195615 -200132732 + AluJb SINE Alu 130 145 -157 2251 89 10 3 chr4 2195615 2195908 -200132439 - AluSc SINE Alu -14 295 1 1546 172 3 107 chr4 2195908 2196097 -200132250 + AluJb SINE Alu 145 293 -9 390 92 0 0 chr4 2196318 2196383 -200131964 - L1MC3 LINE L1 0 7785 7721 1755 149 24 24 chr4 2196383 2196712 -200131635 - MER44D DNA MER2_type 0 609 11 790 181 99 45 chr4 2196737 2196958 -200131389 - L1MD3 LINE L1 -67 7928 7696 2335 92 0 7 chr4 2197075 2197369 -200130978 + AluSc SINE Alu 1 292 -17 2091 136 13 7 chr4 2197395 2197705 -200130642 + AluSx SINE Alu 1 312 0 1189 210 5 0 chr4 2197820 2198044 -200130303 - AluJo SINE Alu -46 266 42 2042 149 7 0 chr4 2198122 2198423 -200129924 + AluSx SINE Alu 1 303 -9 289 234 9 56 chr4 2198607 2198714 -200129633 - MIR3 SINE MIR -1 207 106 894 213 0 18 chr4 2198828 2198997 -200129350 - AluJ SINE Alu 0 302 137 2201 92 58 3 chr4 2199349 2199644 -200128703 - AluSq SINE Alu -2 311 1 825 140 0 37 chr4 2200218 2200354 -200127993 - AluJ SINE Alu -181 131 1 1977 150 3 7 chr4 2200584 2200884 -200127463 - AluSx SINE Alu -13 299 1 2386 96 0 0 chr4 2200895 2201198 -200127149 - AluSx SINE Alu -9 303 1 278 310 14 0 chr4 2201448 2201519 -200126828 + MIR3 SINE MIR 114 185 -23 1707 160 11 14 chr4 2201567 2201849 -200126498 + AluJo SINE Alu 1 281 -31 2195 99 3 3 chr4 2202026 2202320 -200126027 - AluSg SINE Alu -5 305 12 2443 91 3 0 chr4 2202335 2202642 -200125705 - AluSg SINE Alu -2 308 1 669 163 114 8 chr4 2202823 2202946 -200125401 + FLAM_C SINE Alu 3 138 -5 1100 251 122 15 chr4 2202970 2203381 -200124966 + Charlie7 DNA MER1_type 409 863 -1749 1761 155 33 16 chr4 2203479 2203782 -200124565 - AluJb SINE Alu -4 308 1 1598 207 128 91 chr4 2204021 2204195 -200124152 + Charlie7 DNA MER1_type 926 1092 -1520 1571 171 30 16 chr4 2204195 2204500 -200123847 - AluJo SINE Alu -3 309 1 1598 207 128 91 chr4 2204500 2204654 -200123693 + Charlie7 DNA MER1_type 1092 1239 -1373 2190 123 7 0 chr4 2204654 2204955 -200123392 - AluSc SINE Alu -6 303 1 1598 207 128 91 chr4 2204955 2205447 -200122900 + Charlie7 DNA MER1_type 1239 1777 -835 2440 69 0 26 chr4 2205451 2205754 -200122593 - AluY SINE Alu -16 295 1 2230 84 0 4 chr4 2205754 2206029 -200122318 - AluSg SINE Alu -10 300 27 * 2372 103 7 3 chr4 2206028 2206338 -200122009 - AluY SINE Alu 0 311 1 1107 205 47 79 chr4 2206338 2206391 -200121956 + L1 LINE L1 3535 3588 -2558 2145 142 0 0 chr4 2206391 2206694 -200121653 + AluSq SINE Alu 1 303 -10 2245 70 13 61 chr4 2206694 2207007 -200121340 + AluY SINE Alu 1 298 -13 1107 205 47 79 chr4 2207007 2207139 -200121208 + L1 LINE L1 3587 3722 -2424 2333 101 0 10 chr4 2207139 2207435 -200120912 + AluSq SINE Alu 1 293 -20 1107 205 47 79 chr4 2207435 2207564 -200120783 + L1 LINE L1 3722 3854 -2292 1912 118 0 99 chr4 2207564 2207896 -200120451 + AluSx SINE Alu 2 300 -12 1107 205 47 79 chr4 2207896 2208122 -200120225 + L1 LINE L1 3854 4242 -1904 2447 103 0 0 chr4 2208122 2208434 -200119913 + AluSx SINE Alu 1 312 0 22 35 0 0 chr4 2208489 2208518 -200119829 + AT_rich Low_complexity Low_complexity 1 29 0 707 178 49 65 chr4 2208518 2208625 -200119722 + L1 LINE L1 5195 5300 -846 2414 67 0 0 chr4 2208625 2208932 -200119415 + AluY SINE Alu 2 308 0 707 178 49 65 chr4 2208932 2209008 -200119339 + L1 LINE L1 5300 5376 -770 602 231 0 8 chr4 2209009 2209143 -200119204 + AluJb SINE Alu 171 303 -9 812 183 47 26 chr4 2209146 2209328 -200119019 + L1MB4 LINE L1 5959 6136 -47 629 206 15 0 chr4 2209328 2209459 -200118888 + AluJo/FLAM SINE Alu 1 133 -169 2033 106 4 4 chr4 2209459 2209734 -200118613 + AluSp SINE Alu 38 312 -1 1663 119 0 119 chr4 2209734 2210069 -200118278 + AluY SINE Alu 2 296 -5 2446 88 0 0 chr4 2210074 2210370 -200117977 + AluSq SINE Alu 1 296 -17 812 183 47 26 chr4 2210370 2210404 -200117943 + L1MB4 LINE L1 6139 6176 -7 2414 75 0 13 chr4 2210552 2210858 -200117489 - AluY SINE Alu -9 302 1 2616 44 0 3 chr4 2210858 2211199 -200117148 - LTR10C LTR ERV1 -251 340 1 245 293 0 0 chr4 2211613 2211671 -200116676 - MIR SINE MIR -51 211 154 2173 90 7 33 chr4 2211807 2212108 -200116239 - AluSq SINE Alu -20 293 1 2133 129 0 0 chr4 2212649 2212936 -200115411 - AluSg SINE Alu -23 287 1 2445 98 0 0 chr4 2213806 2214111 -200114236 - AluY SINE Alu -6 305 1 2192 118 3 13 chr4 2214359 2214664 -200113683 - AluSx SINE Alu -10 302 1 23 0 0 0 chr4 2214782 2214805 -200113542 + AT_rich Low_complexity Low_complexity 1 23 0 865 180 180 5 chr4 2214890 2215084 -200113263 + AluSg/x SINE Alu 69 296 -13 2339 92 0 0 chr4 2215093 2215386 -200112961 + AluSx SINE Alu 1 293 -19 2085 111 57 3 chr4 2215457 2215754 -200112593 - AluSp SINE Alu 0 313 1 21 0 0 0 chr4 2215764 2215785 -200112562 + AT_rich Low_complexity Low_complexity 1 21 0 2414 88 0 10 chr4 2216053 2216359 -200111988 + AluSg1 SINE Alu 1 303 -6 265 297 148 33 chr4 2217261 2217443 -200110904 + MIR SINE MIR 53 255 -7 2253 93 41 0 chr4 2218584 2218875 -200109472 + AluSg SINE Alu 1 303 -7 1370 104 0 0 chr4 2218875 2219048 -200109299 + AluSg/x SINE Alu 134 306 -6 1546 163 3 83 chr4 2219048 2219348 -200108999 - AluJo SINE Alu -30 282 7 205 307 110 24 chr4 2219617 2219744 -200108603 + MIR3 SINE MIR 30 167 -41 669 161 0 8 chr4 2220132 2220250 -200108097 + FLAM_A SINE Alu 18 134 -8 515 205 214 12 chr4 2220396 2220694 -200107653 - L1ME LINE L1 -511 5659 5327 1187 99 0 0 chr4 2220704 2220898 -200107449 - AluY SINE Alu 0 325 132 2339 101 3 16 chr4 2220898 2221214 -200107133 - AluSx SINE Alu 0 312 1 2564 64 0 0 chr4 2221509 2221806 -200106541 - AluY SINE Alu -14 297 1 1349 122 149 9 chr4 2221905 2222127 -200106220 - AluSg1 SINE Alu -4 305 53 2018 161 7 0 chr4 2222355 2222659 -200105688 - AluSx SINE Alu -6 306 1 1906 170 0 16 chr4 2222730 2223047 -200105300 - AluJb SINE Alu 0 312 1 269 109 22 0 chr4 2223365 2223411 -200104936 + GA-rich Low_complexity Low_complexity 2 48 0 1735 178 30 3 chr4 2224020 2224324 -200104023 - AluJb SINE Alu 0 312 1 2184 95 3 7 chr4 2224733 2225089 -200103258 - AluSp SINE Alu 0 355 1 2235 109 20 0 chr4 2225089 2225393 -200102954 - AluSq SINE Alu 0 313 4 2269 110 7 0 chr4 2225396 2225695 -200102652 - AluSq SINE Alu -12 301 1 227 368 74 0 chr4 2227262 2227425 -200100922 - MIR SINE MIR -18 244 70 2334 97 0 0 chr4 2233224 2233522 -200094825 - AluSx SINE Alu -14 298 1 670 178 0 15 chr4 2233550 2233685 -200094662 - FLAM_C SINE Alu 0 133 1 2327 88 3 7 chr4 2233818 2234112 -200094235 - AluSx SINE Alu -7 305 13 1324 120 43 14 chr4 2234138 2234347 -200094000 - AluSg/x SINE Alu -2 308 94 320 260 81 16 chr4 2234348 2234471 -200093876 - L1 LINE L1 -2190 3956 3826 2140 136 0 10 chr4 2234481 2234791 -200093556 - AluSg SINE Alu -3 307 1 1537 155 200 70 chr4 2234820 2235011 -200093336 - Tigger3b DNA MER2_type -2481 547 382 1477 189 71 27 chr4 2235011 2235308 -200093039 - AluJb SINE Alu -2 310 1 1537 155 200 70 chr4 2235308 2235354 -200092993 - Tigger3b DNA MER2_type -2646 382 343 2312 103 0 25 chr4 2235354 2235674 -200092673 + AluSq SINE Alu 1 312 -1 1537 155 200 70 chr4 2235674 2235919 -200092428 - Tigger3b DNA MER2_type -2685 343 1 223 25 50 25 chr4 2235997 2236037 -200092310 + (TTTG)n Simple_repeat Simple_repeat 2 42 0 1382 109 0 0 chr4 2236044 2236219 -200092128 - AluSq SINE Alu -138 175 1 740 118 97 28 chr4 2236226 2236370 -200091977 - Tigger7 DNA MER2_type -27 2460 2307 2344 96 3 0 chr4 2236385 2236678 -200091669 - AluSg SINE Alu -15 295 2 489 148 0 0 chr4 2236700 2236781 -200091566 - FLAM SINE Alu -10 133 53 381 234 169 39 chr4 2236868 2236983 -200091364 - L1ME3A LINE L1 -300 5870 5771 2955 7 0 0 chr4 2236983 2237292 -200091055 + AluYb8 SINE Alu 1 309 -9 381 234 169 39 chr4 2237292 2237407 -200090940 - L1ME3A LINE L1 -399 5771 5610 * 757 231 77 10 chr4 2237406 2237603 -200090744 + L1 LINE L1 2831 3056 -3090 2536 55 0 3 chr4 2237603 2237896 -200090451 + AluY SINE Alu 1 292 -19 757 231 77 10 chr4 2237896 2237997 -200090350 + L1 LINE L1 3056 3149 -2997 2120 125 0 0 chr4 2237998 2238279 -200090068 + AluSx SINE Alu 1 281 -31 2425 99 0 0 chr4 2238294 2238596 -200089751 + AluSx SINE Alu 1 302 -10 2275 103 3 10 chr4 2238602 2238912 -200089435 + AluSp SINE Alu 6 313 0 2119 123 7 0 chr4 2238921 2239221 -200089126 + AluY SINE Alu 2 303 -8 451 228 106 7 chr4 2239224 2239443 -200088904 + L1 LINE L1 3299 3539 -2607 453 32 0 16 chr4 2239543 2239605 -200088742 - AluY SINE Alu -248 62 2 296 363 90 22 chr4 2239703 2240069 -200088278 - HAL1 LINE L1 -741 1766 1376 1327 174 45 74 chr4 2240080 2240342 -200088005 - MER7A DNA MER2_type -2705 333 82 2169 131 0 3 chr4 2240342 2240640 -200087707 + AluSx SINE Alu 1 297 -15 1327 174 45 74 chr4 2240640 2240687 -200087660 - MER7A DNA MER2_type -2956 82 35 325 263 64 55 chr4 2240713 2240896 -200087451 - L1MEd LINE L1 -1165 1325 1104 476 274 101 55 chr4 2241711 2242076 -200086271 - Charlie2 DNA MER1_type -77 2785 2404 1443 152 0 0 chr4 2242080 2242290 -200086057 - AluSg/x SINE Alu -20 292 83 1025 273 66 62 chr4 2242290 2242822 -200085525 - Charlie2 DNA MER1_type -443 2419 1886 2384 97 17 3 chr4 2242860 2243210 -200085137 + THE1A LTR MaLR 1 355 0 11913 74 4 10 chr4 2243210 2243686 -200084661 + THE1A-int LTR MaLR 1 478 -1102 2211 138 0 0 chr4 2243686 2243991 -200084356 - AluSx SINE Alu -7 305 1 11913 74 4 10 chr4 2243991 2245032 -200083315 + THE1A-int LTR MaLR 478 1511 -69 2505 93 6 0 chr4 2245032 2245385 -200082962 - THE1A LTR MaLR 0 355 1 11913 74 4 10 chr4 2245385 2245455 -200082892 + THE1A-int LTR MaLR 1511 1580 0 2228 107 11 22 chr4 2245457 2245813 -200082534 + THE1A LTR MaLR 3 354 -1 271 324 14 0 chr4 2246007 2246081 -200082266 - Charlie2b DNA MER1_type -2029 753 679 1250 198 124 41 chr4 2248410 2248485 -200079862 + MSTC LTR MaLR 2 69 -359 2071 127 0 0 chr4 2248485 2248777 -200079570 + AluSx SINE Alu 1 292 -20 1250 198 124 41 chr4 2248777 2249095 -200079252 + MSTC LTR MaLR 69 428 0 26 0 0 0 chr4 2249339 2249365 -200078982 + GC_rich Low_complexity Low_complexity 1 26 0 913 244 121 37 chr4 2252255 2252686 -200075661 + MLT1C LTR MaLR 1 467 0 305 314 0 12 chr4 2253621 2253707 -200074640 - L1MEc LINE L1 -4437 1959 1875 1393 94 0 62 chr4 2253740 2253754 -200074593 - AluSg/x SINE Alu 0 310 297 1331 167 27 0 chr4 2253754 2254012 -200074335 - L1MB3 LINE L1 0 6183 5919 1393 94 0 62 chr4 2254012 2254221 -200074126 - AluSg/x SINE Alu -13 297 101 1544 128 4 0 chr4 2254228 2254454 -200073893 + AluSg/x SINE Alu 67 293 -17 303 240 21 0 chr4 2255893 2255989 -200072358 - L1ME3A LINE L1 -220 5950 5853 1697 245 46 40 chr4 2256126 2256628 -200071719 - MLT1D LTR MaLR 0 505 1 206 239 0 0 chr4 2257115 2257161 -200071186 + L2 LINE L2 3208 3253 -19 351 233 33 0 chr4 2258157 2258247 -200070100 - MER20 DNA MER1_type -5 214 122 455 271 12 66 chr4 2258518 2258684 -200069663 - L2 LINE L2 -541 2773 2617 1715 189 51 33 chr4 2258756 2258841 -200069506 - L1MB3 LINE L1 -7 6176 6094 2124 95 20 20 chr4 2258841 2259145 -200069202 + AluSx SINE Alu 1 304 -8 1715 189 51 33 chr4 2259145 2259234 -200069113 - L1MB3 LINE L1 -89 6094 5699 557 336 93 3 chr4 2259234 2259523 -200068824 - L1MD1 LINE L1 -241 6001 5687 343 338 146 12 chr4 2259523 2259866 -200068481 - L2 LINE L2 -770 2544 2156 295 323 158 29 chr4 2259902 2260218 -200068129 - L2 LINE L2 -1406 1908 1552 233 300 25 0 chr4 2260960 2261040 -200067307 + MLT1H LTR MaLR 80 161 -388 269 322 96 9 chr4 2261103 2261218 -200067129 + L2 LINE L2 3185 3309 -4 3142 86 35 5 chr4 2262140 2262571 -200065776 - MLT2A1 LTR ERVL 0 444 1 2117 123 0 13 chr4 2265305 2265614 -200062733 + AluSq SINE Alu 1 305 -8 1668 228 69 61 chr4 2265617 2265658 -200062689 + L1MB5 LINE L1 5564 5603 -571 2225 68 41 7 chr4 2265658 2265953 -200062394 + AluY SINE Alu 1 305 -6 1668 228 69 61 chr4 2265953 2266504 -200061843 + L1MB5 LINE L1 5603 6161 -13 1025 152 0 39 chr4 2266517 2266695 -200061652 - FRAM SINE Alu -7 169 1 2282 106 3 3 chr4 2267428 2267740 -200060607 + AluSx SINE Alu 1 312 0 2213 116 0 0 chr4 2267752 2268053 -200060294 + AluSx SINE Alu 1 301 -11 367 369 83 23 chr4 2268233 2268612 -200059735 - L1MDa LINE L1 -3905 2635 2316 284 319 58 21 chr4 2268837 2269028 -200059319 - HAL1 LINE L1 -794 1713 1516 1982 85 12 0 chr4 2269290 2269548 -200058799 - AluSg SINE Alu -49 261 1 300 286 51 46 chr4 2269934 2270124 -200058223 + MLT1H LTR MaLR 35 239 -356 379 254 70 7 chr4 2270571 2270713 -200057634 - L1MDa LINE L1 -5926 604 454 1944 184 19 73 chr4 2271758 2272147 -200056200 - L1MB5 LINE L1 0 6174 5819 2492 62 0 0 chr4 2272147 2272453 -200055894 - AluY SINE Alu -1 310 5 1944 184 19 73 chr4 2272453 2272586 -200055761 - L1MB5 LINE L1 -355 5819 5680 210 351 84 30 chr4 2273259 2273390 -200054957 + MIR SINE MIR 19 156 -106 305 290 57 8 chr4 2273501 2273625 -200054722 - MLT1J2 LTR MaLR -191 259 130 256 302 38 28 chr4 2274046 2274152 -200054195 - MIR SINE MIR -43 219 113 808 163 0 15 chr4 2276997 2277114 -200051233 + FLAM_C SINE Alu 1 117 -195 252 0 0 0 chr4 2277114 2277142 -200051205 + (CA)n Simple_repeat Simple_repeat 2 29 0 808 163 0 15 chr4 2277142 2277159 -200051188 + FLAM_C SINE Alu 117 133 -179 21 57 0 0 chr4 2279104 2279139 -200049208 + GC_rich Low_complexity Low_complexity 1 35 0 45 75 0 22 chr4 2280334 2280468 -200047879 + GC_rich Low_complexity Low_complexity 1 131 0 1616 271 88 18 chr4 2281442 2282113 -200046234 + L2 LINE L2 1692 2409 -905 1328 277 102 17 chr4 2282292 2282761 -200045586 - MLT1J LTR MaLR -1 510 2 2238 84 20 0 chr4 2283012 2283310 -200045037 - AluSx SINE Alu -8 304 1 1388 130 57 57 chr4 2283456 2283718 -200044629 + AluJo SINE Alu 36 297 -15 871 225 11 6 chr4 2284477 2284655 -200043692 - AluJo SINE Alu -21 291 113 180 111 0 0 chr4 2284921 2284948 -200043399 + (CACCG)n Simple_repeat Simple_repeat 3 29 0 1521 139 21 107 chr4 2285798 2286135 -200042212 + AluYb8 SINE Alu 1 308 -10 755 276 174 2 chr4 2286509 2286962 -200041385 - HAL1 LINE L1 -1136 1371 841 392 312 211 19 chr4 2289907 2290735 -200037612 + L2 LINE L2 1540 2526 -788 365 268 101 0 chr4 2290721 2290859 -200037488 + L2 LINE L2 2844 2995 -318 * 2545 61 0 0 chr4 2291242 2291552 -200036795 - AluY SINE Alu -1 310 1 299 160 35 128 chr4 2292274 2292318 -200036029 + MLT1C LTR MaLR 1 47 -432 647 197 15 38 chr4 2292318 2292450 -200035897 + FLAM_A SINE Alu 1 129 -4 1826 168 3 7 chr4 2292452 2292744 -200035603 + AluJo SINE Alu 1 291 -21 2347 68 0 3 chr4 2292748 2293042 -200035305 + AluY SINE Alu 1 293 -18 299 160 35 128 chr4 2293042 2293131 -200035216 + MLT1C LTR MaLR 51 126 -353 373 363 73 12 chr4 2293134 2293393 -200034954 - L1MC/D LINE L1 -2089 5719 5445 768 190 135 6 chr4 2293399 2293562 -200034785 - AluSg/x SINE Alu -11 299 116 602 302 61 63 chr4 2293636 2294047 -200034300 - MLT1J LTR MaLR -1 510 101 343 284 0 71 chr4 2295545 2295700 -200032647 - L2 LINE L2 -544 2770 2627 480 320 90 48 chr4 2295779 2296091 -200032256 - L2 LINE L2 -923 2391 2067 208 286 18 0 chr4 2296569 2296625 -200031722 - MIR SINE MIR -63 145 89 2201 95 3 16 chr4 2296675 2296990 -200031357 + AluSx SINE Alu 1 311 -1 1230 186 19 0 chr4 2297303 2297518 -200030829 + AluJb SINE Alu 1 219 -93 636 125 158 33 chr4 2297637 2297757 -200030590 + AluJb SINE Alu 167 301 -11 228 86 0 0 chr4 2297759 2297794 -200030553 + (TA)n Simple_repeat Simple_repeat 1 35 0 744 239 119 0 chr4 2298029 2298280 -200030067 - L1MB3 LINE L1 -8 6175 5895 2360 50 0 0 chr4 2299917 2300222 -200028125 - AluY SINE Alu 0 305 1 1043 171 0 0 chr4 2300284 2300448 -200027899 + FRAM SINE Alu 1 164 -2 512 277 50 0 chr4 2300812 2300953 -200027394 - MIR SINE MIR -70 192 45 2386 61 7 0 chr4 2301507 2301801 -200026546 - AluSx SINE Alu -16 296 1 2714 7 0 0 chr4 2301806 2302105 -200026242 - AluYa5 SINE Alu -12 299 1 641 157 0 0 chr4 2302129 2302231 -200026116 + AluJ/FLAM SINE Alu 1 102 -210 474 114 0 0 chr4 2502231 2502301 -199826046 + Alu SINE Alu 234 303 -9 1272 112 6 0 chr4 2502301 2502480 -199825867 + AluSg/x SINE Alu 118 297 -15 678 292 33 30 chr4 2502568 2502869 -199825478 + L1MC4a LINE L1 5298 5599 -2209 583 314 144 14 chr4 2503015 2503215 -199825132 + L1MC4a LINE L1 5910 6157 -1651 2061 138 7 0 chr4 2503215 2503519 -199824828 - AluJb SINE Alu -6 306 1 583 314 144 14 chr4 2503519 2503595 -199824752 + L1MC4a LINE L1 6157 6222 -1586 317 324 20 7 chr4 2504320 2504468 -199823879 + (TCCA)n Simple_repeat Simple_repeat 3 152 0 205 188 0 42 chr4 2506439 2506487 -199821860 + C-rich Low_complexity Low_complexity 6 51 0 334 273 161 14 chr4 2507156 2507442 -199820905 + L2 LINE L2 2248 2575 -739 426 304 93 20 chr4 2507535 2507782 -199820565 + L2 LINE L2 2844 3108 -205 972 186 7 3 chr4 2508141 2508587 -199819760 + (TCCA)n Simple_repeat Simple_repeat 1 627 0 790 208 6 1 chr4 2508620 2509321 -199819026 + (TCCA)n Simple_repeat Simple_repeat 1 704 0 635 215 6 0 chr4 2509346 2509518 -199818829 + (TCCA)n Simple_repeat Simple_repeat 2 174 0 352 341 112 25 chr4 2509518 2509600 -199818747 - L2 LINE L2 0 3313 3239 2080 127 10 0 chr4 2509600 2509933 -199818414 + AluSx SINE Alu 1 312 0 352 341 112 25 chr4 2509933 2510164 -199818183 - L2 LINE L2 -74 3239 2973 274 282 39 0 chr4 2510271 2510349 -199817998 + MLT1K LTR MaLR 166 246 -342 256 268 89 18 chr4 2510426 2510538 -199817809 + MLT1K LTR MaLR 467 586 -2 2078 83 4 7 chr4 2514810 2515087 -199813260 - AluSx SINE Alu -11 301 26 281 26 26 0 chr4 2515105 2515143 -199813204 + (TTA)n Simple_repeat Simple_repeat 2 40 0 1024 144 0 0 chr4 2515150 2515296 -199813051 - FRAM SINE Alu -36 140 1 21 82 0 0 chr4 2615656 2615705 -199712642 + AT_rich Low_complexity Low_complexity 1 49 0 305 233 0 14 chr4 2615745 2615818 -199712529 + MIR SINE MIR 66 137 -125 354 239 53 80 chr4 2615972 2616085 -199712262 - L2 LINE L2 -11 3302 3193 22 35 0 0 chr4 2616904 2616933 -199711414 + AT_rich Low_complexity Low_complexity 1 29 0 2466 67 0 0 chr4 2617322 2617619 -199710728 - AluY SINE Alu -14 297 1 2351 191 43 41 chr4 2617642 2617705 -199710642 - L1M4 LINE L1 -1031 5115 5054 2264 107 10 0 chr4 2617705 2618004 -199710343 + AluSg SINE Alu 1 302 -8 2351 191 43 41 chr4 2618004 2618595 -199709752 - L1M4 LINE L1 -1092 5054 4460 754 187 8 0 chr4 2618642 2618765 -199709582 + FLAM_C SINE Alu 4 127 -16 469 207 112 73 chr4 2618767 2618939 -199709408 - L1M4 LINE L1 -1718 4428 4247 2237 91 13 7 chr4 2618939 2619237 -199709110 - AluSp SINE Alu -13 300 1 1685 83 0 200 chr4 2619246 2619621 -199708726 - AluSx SINE Alu 0 302 3 1899 156 3 19 chr4 2619630 2619945 -199708402 - AluSx SINE Alu -2 310 1 344 212 106 15 chr4 2619949 2620081 -199708266 - L1MEc LINE L1 -5509 887 744 326 311 58 39 chr4 2620246 2620452 -199707895 - L2 LINE L2 -20 3293 3084 1927 102 51 17 chr4 2620521 2620815 -199707532 + AluSq SINE Alu 1 304 -9 517 245 38 43 chr4 2621112 2621296 -199707051 - LTR41 LTR ERVL -590 183 1 376 310 120 37 chr4 2621448 2621748 -199706599 - L2 LINE L2 -512 2802 2478 2147 131 0 7 chr4 2621935 2622240 -199706107 + AluJb SINE Alu 7 309 -3 1648 215 19 25 chr4 2622511 2622878 -199705469 - MLT1A1 LTR MaLR 0 365 1 2401 62 3 7 chr4 2623136 2623426 -199704921 - AluSc SINE Alu -20 289 1 1750 108 123 4 chr4 2624132 2624401 -199703946 - AluSx SINE Alu -1 301 1 37 23 0 0 chr4 2624630 2624674 -199703673 + AT_rich Low_complexity Low_complexity 1 44 0 779 179 8 0 chr4 2624674 2624797 -199703550 - FLAM_C SINE Alu -9 124 1 1354 163 106 12 chr4 2624843 2625088 -199703259 - AluJb SINE Alu -44 268 1 2022 145 10 0 chr4 2625674 2625978 -199702369 - AluJb SINE Alu -5 307 1 194 307 120 7 chr4 2626798 2626948 -199701399 - MIR SINE MIR 0 262 96 2014 132 35 0 chr4 2627113 2627401 -199700946 - AluSg SINE Alu -11 299 2 2173 106 3 39 chr4 2627529 2627698 -199700649 - AluSg SINE Alu -10 300 145 2486 74 0 0 chr4 2627698 2627995 -199700352 - AluY SINE Alu -14 297 1 2173 106 3 39 chr4 2627995 2628136 -199700211 - AluSg SINE Alu -165 145 1 1643 159 78 3 chr4 2628322 2628605 -199699742 + AluJo SINE Alu 1 304 -8 2147 66 92 0 chr4 2628806 2629079 -199699268 - AluY SINE Alu -13 298 1 304 247 0 14 chr4 2629113 2629186 -199699161 - L1ME4a LINE L1 -7 6114 6043 2538 64 0 3 chr4 2629802 2630100 -199698247 + AluY SINE Alu 1 297 -14 331 284 199 0 chr4 2630486 2630687 -199697660 + MIR SINE MIR 22 262 0 213 242 106 0 chr4 2630698 2630764 -199697583 + MIR SINE MIR 111 183 -79 923 126 0 38 chr4 2631958 2632117 -199696230 - MSTC LTR MaLR -51 377 225 1436 169 97 29 chr4 2632237 2632515 -199695832 + AluJb SINE Alu 3 299 -13 2472 86 0 3 chr4 2633067 2633380 -199694967 + AluSx SINE Alu 1 312 0 247 287 54 30 chr4 2633490 2633561 -199694786 + L1MEd LINE L1 278 346 -6026 2328 90 0 3 chr4 2633561 2633860 -199694487 + AluSq SINE Alu 1 298 -15 247 287 54 30 chr4 2633860 2633955 -199694392 + L1MEd LINE L1 346 448 -5924 307 305 125 38 chr4 2634123 2634490 -199693857 + L1MEd LINE L1 686 1084 -5288 321 347 67 21 chr4 2634570 2634763 -199693584 + L1MEd LINE L1 1302 1477 -4907 420 320 33 62 chr4 2634833 2635077 -199693270 - L1MC4 LINE L1 -48 7994 7758 2097 182 73 137 chr4 2635232 2635518 -199692829 - Charlie1 DNA MER1_type 0 2761 2458 2068 89 0 19 chr4 2635518 2635789 -199692558 - AluSq SINE Alu -47 266 1 2097 182 73 137 chr4 2635789 2635996 -199692351 - Charlie1 DNA MER1_type -303 2458 2239 1911 123 0 53 chr4 2635996 2636314 -199692033 - AluSc SINE Alu -8 301 1 2097 182 73 137 chr4 2636314 2636770 -199691577 - Charlie1 DNA MER1_type -522 2239 1872 2102 125 0 0 chr4 2637000 2637279 -199691068 + AluJb SINE Alu 5 283 -29 26 50 0 0 chr4 2637298 2637338 -199691009 + AT_rich Low_complexity Low_complexity 1 40 0 217 232 146 66 chr4 2637655 2637806 -199690541 + MIR SINE MIR 81 243 -19 2272 113 0 3 chr4 2640636 2640945 -199687402 + AluSx SINE Alu 5 312 0 805 235 11 0 chr4 2641089 2641268 -199687079 + AluJo SINE Alu 8 188 -124 2295 77 3 39 chr4 2641269 2641580 -199686767 + AluY SINE Alu 1 300 -11 1684 58 0 19 chr4 2641990 2642198 -199686149 - AluY SINE Alu -12 299 96 321 161 0 0 chr4 2642597 2642653 -199685694 - L1MB8 LINE L1 -30 6148 6093 745 175 60 22 chr4 2642656 2642839 -199685508 - L1MB4 LINE L1 0 6180 5991 308 316 71 26 chr4 2642895 2643050 -199685297 - L1MC5 LINE L1 -473 7488 7327 216 0 0 0 chr4 2644294 2644318 -199684029 + (TG)n Simple_repeat Simple_repeat 1 24 0 2350 112 0 0 chr4 2644770 2645082 -199683265 - AluSx SINE Alu 0 312 1 248 180 49 0 chr4 2645249 2645310 -199683037 + T-rich Low_complexity Low_complexity 3 66 0 2333 108 0 7 chr4 2645415 2645722 -199682625 - AluSx SINE Alu -7 305 1 2354 84 3 3 chr4 2646397 2646695 -199681652 - AluSp SINE Alu -15 298 1 340 156 0 47 chr4 2647374 2647438 -199680909 - AluJ/FLAM SINE Alu -241 61 1 184 233 0 100 chr4 2647585 2647645 -199680702 - MIR3 SINE MIR -12 196 143 1976 157 0 3 chr4 2648341 2648641 -199679706 + AluJo SINE Alu 1 299 -13 1884 174 10 0 chr4 2648641 2648934 -199679413 + AluJo SINE Alu 1 297 -15 3649 135 8 8 chr4 2649013 2649540 -199678807 + MER1A DNA MER1_type 1 527 0 1810 138 70 54 chr4 2650258 2650299 -199678048 - THE1C LTR MaLR 0 375 336 2271 111 7 0 chr4 2650299 2650605 -199677742 + AluSp SINE Alu 1 308 -5 1810 138 70 54 chr4 2650605 2650932 -199677415 - THE1C LTR MaLR -39 336 1 2356 116 138 5 chr4 2651623 2652001 -199676346 - MSTA LTR MaLR 0 428 1 2383 96 0 0 chr4 2652688 2652991 -199675356 - AluSc SINE Alu -6 303 1 455 196 29 20 chr4 2653138 2653240 -199675107 - MLT1C LTR MaLR -42 425 323 963 150 40 93 chr4 2653472 2653698 -199674649 - AluSg/x SINE Alu -14 298 85 306 229 123 0 chr4 2653927 2654049 -199674298 - L1M4 LINE L1 -1581 4565 4429 482 265 118 80 chr4 2654181 2654678 -199673669 - L1M4 LINE L1 -1872 4274 3797 282 95 0 0 chr4 2654678 2654720 -199673627 + (TG)n Simple_repeat Simple_repeat 2 43 0 482 265 118 80 chr4 2654720 2654743 -199673604 - L1M4 LINE L1 -2349 3797 3776 1293 182 3 83 chr4 2654743 2654902 -199673445 - AluJo SINE Alu -24 288 165 1654 158 11 11 chr4 2654902 2655187 -199673160 + AluJo SINE Alu 1 285 -27 1293 182 3 83 chr4 2655187 2655340 -199673007 - AluJo SINE Alu -147 165 1 482 265 118 80 chr4 2655340 2655479 -199672868 - L1M4 LINE L1 -2370 3776 3589 321 215 0 0 chr4 2655935 2656000 -199672347 - Charlie8 DNA MER1_type -2249 168 104 2037 114 0 3 chr4 2656142 2656440 -199671907 + AluSx SINE Alu 4 300 -12 186 361 118 14 chr4 2656623 2656767 -199671580 + L2 LINE L2 3095 3253 -19 298 302 102 34 chr4 2657344 2657549 -199670798 - MIR SINE MIR 0 262 44 2173 99 0 0 chr4 2658002 2658305 -199670042 - AluSx SINE Alu -9 303 1 229 222 0 63 chr4 2660675 2660738 -199667609 + MIR SINE MIR 85 143 -65 2279 92 0 0 chr4 2661155 2661461 -199666886 + AluY SINE Alu 1 306 -5 2062 116 0 0 chr4 2662938 2663249 -199665098 + AluSx SINE Alu 1 311 0 1916 198 82 140 chr4 2663382 2663809 -199664538 - L1ME LINE L1 -1008 5949 5499 2296 78 10 3 chr4 2663809 2664117 -199664230 - AluSg SINE Alu 0 310 1 1916 198 82 140 chr4 2664117 2664743 -199663604 - L1ME LINE L1 -1458 5499 4957 1435 172 21 81 chr4 2664749 2665081 -199663266 - AluJo SINE Alu 0 312 1 932 85 0 0 chr4 2665100 2665230 -199663117 - AluY SINE Alu -11 300 171 2944 245 85 32 chr4 2665230 2666318 -199662029 - L1ME LINE L1 -1976 4981 3837 573 260 12 0 chr4 2666293 2666462 -199661885 - L1ME LINE L1 -3372 3585 3415 * 563 191 24 15 chr4 2666506 2666618 -199661729 - MLT1A1 LTR MaLR -272 93 1 937 243 122 4 chr4 2666625 2667007 -199661340 - L1ME LINE L1 -3549 3408 3009 235 182 18 0 chr4 2667052 2667107 -199661240 - L1ME LINE L1 -4302 2836 2781 1497 214 10 3 chr4 2667161 2667456 -199660891 - AluJo SINE Alu -5 297 1 2145 108 10 0 chr4 2667468 2667765 -199660582 - AluSx SINE Alu -12 300 1 305 256 83 48 chr4 2667765 2667995 -199660352 - L1ME LINE L1 -4343 2795 2558 270 176 0 0 chr4 2668023 2668074 -199660273 + CT-rich Low_complexity Low_complexity 2 52 0 1982 153 0 3 chr4 2668085 2668398 -199659949 - AluSx SINE Alu 0 312 1 302 227 193 20 chr4 2668437 2668587 -199659760 - L1ME LINE L1 -4602 2536 2361 1873 115 31 0 chr4 2668600 2668887 -199659460 + AluSx SINE Alu 11 306 -6 574 202 62 0 chr4 2668895 2669024 -199659323 - L1MC1 LINE L1 -14 6319 6183 544 180 25 33 chr4 2669025 2669147 -199659200 - MER67B LTR ERV1 -463 198 78 1172 263 96 40 chr4 2669187 2669715 -199658632 - L1ME LINE L1 -4868 1987 1544 1871 147 0 23 chr4 2669715 2670015 -199658332 - AluJb SINE Alu -19 293 1 1172 263 96 40 chr4 2670015 2670314 -199658033 - L1ME LINE L1 -5311 1544 1263 308 285 84 28 chr4 2670786 2670965 -199657382 - L1ME LINE L1 -6660 199 11 733 191 32 0 chr4 2673974 2674100 -199654247 + FLAM_C SINE Alu 2 131 -12 2027 251 20 23 chr4 2674270 2674868 -199653479 - L1MCa LINE L1 -3279 3147 2552 7855 186 39 48 chr4 2674877 2675908 -199652439 - L1MB3 LINE L1 -5 6178 5139 2382 61 3 0 chr4 2675908 2676201 -199652146 + AluY SINE Alu 1 294 -17 7855 186 39 48 chr4 2676201 2676651 -199651696 - L1MB3 LINE L1 -1044 5139 4686 262 0 26 26 chr4 2676651 2676690 -199651657 + (TTTTG)n Simple_repeat Simple_repeat 5 43 0 7855 186 39 48 chr4 2676690 2676706 -199651641 - L1MB3 LINE L1 -1497 4686 4671 2256 77 0 7 chr4 2676706 2677006 -199651341 + AluY SINE Alu 1 298 -13 7855 186 39 48 chr4 2677006 2677239 -199651108 - L1MB3 LINE L1 -1512 4671 4437 1707 120 53 0 chr4 2677239 2677531 -199650816 - AluY SINE Alu 0 306 1 7855 186 39 48 chr4 2677531 2677608 -199650739 - L1MB3 LINE L1 -1746 4437 4361 2307 89 0 0 chr4 2677608 2677910 -199650437 - AluSx SINE Alu -10 302 1 7855 186 39 48 chr4 2677910 2678619 -199649728 - L1MB3 LINE L1 -1822 4361 3647 2217 85 16 0 chr4 2678619 2678926 -199649421 - AluSp SINE Alu -1 312 1 7855 186 39 48 chr4 2678926 2679109 -199649238 - L1MB3 LINE L1 -2536 3647 3512 2127 117 0 3 chr4 2679109 2679408 -199648939 - AluSx SINE Alu -14 298 1 7855 186 39 48 chr4 2679408 2679571 -199648776 - L1MB3 LINE L1 -2671 3512 3349 1518 170 3 55 chr4 2679572 2679884 -199648463 - AluJo SINE Alu -16 296 1 2145 106 0 0 chr4 2679897 2680189 -199648158 - AluSx SINE Alu -20 292 1 879 161 11 33 chr4 2680221 2680401 -199647946 - FRAM SINE Alu 0 176 1 1093 215 43 70 chr4 2680402 2680685 -199647662 - L1MB3 LINE L1 -2810 3336 3070 1502 146 16 59 chr4 2680685 2681006 -199647341 - AluJb SINE Alu 0 312 6 1093 215 43 70 chr4 2681006 2681191 -199647156 - L1MB3 LINE L1 -3076 3070 2881 2326 83 0 0 chr4 2681220 2681521 -199646826 - AluY SINE Alu 0 311 11 784 197 0 0 chr4 2681573 2681705 -199646642 - FLAM_A SINE Alu -5 137 6 2274 230 101 71 chr4 2681709 2682532 -199645815 - L1MCa LINE L1 -3934 2492 1695 2063 117 7 0 chr4 2682532 2682840 -199645507 - AluSx SINE Alu -2 310 1 2274 230 101 71 chr4 2682840 2683384 -199644963 - L1MCa LINE L1 -4731 1695 888 432 282 156 26 chr4 2683434 2683895 -199644452 - L1MEd LINE L1 -5002 1117 597 443 302 83 16 chr4 2685584 2685776 -199642571 - L2 LINE L2 -9 3304 3100 662 228 217 11 chr4 2686558 2686747 -199641600 - MIR SINE MIR -7 255 28 253 309 186 5 chr4 2686864 2687068 -199641279 + L2 LINE L2 2533 2773 -541 190 313 57 47 chr4 2687613 2687824 -199640523 - L2 LINE L2 -216 3056 2844 398 280 10 0 chr4 2687858 2687958 -199640389 - L2 LINE L2 -557 2757 2657 756 200 61 22 chr4 2689613 2689793 -199638554 + MIR SINE MIR 74 260 -2 1266 147 0 10 chr4 2690475 2690679 -199637668 - AluSq SINE Alu -27 286 85 299 239 14 0 chr4 2690845 2690916 -199637431 + L1MC4 LINE L1 6941 7012 -1030 805 96 0 26 chr4 2690932 2691047 -199637300 + FLAM_C SINE Alu 29 140 -3 416 348 92 60 chr4 2691057 2691339 -199637008 + L1MC4a LINE L1 7021 7292 -516 2081 125 68 3 chr4 2691339 2691691 -199636656 - THE1C LTR MaLR 0 375 1 416 348 92 60 chr4 2691691 2692027 -199636320 + L1MC4a LINE L1 7292 7592 -216 250 281 0 16 chr4 2692087 2692151 -199636196 + GA-rich Low_complexity Low_complexity 2 64 0 756 184 0 0 chr4 2692164 2692289 -199636058 + FLAM_C SINE Alu 1 125 -18 1636 105 124 15 chr4 2692294 2692561 -199635786 - AluSg SINE Alu -14 296 1 257 271 133 38 chr4 2692587 2692797 -199635550 + L1MC4 LINE L1 7811 8040 -2 2204 111 3 0 chr4 2693504 2693810 -199634537 - AluSg SINE Alu -3 307 1 1310 161 173 4 chr4 2695030 2695300 -199633047 + AluJo SINE Alu 1 311 0 21 36 0 0 chr4 2695549 2695577 -199632770 + AT_rich Low_complexity Low_complexity 1 28 0 1052 135 12 18 chr4 2696436 2696606 -199631741 + AluSg/x SINE Alu 121 289 -21 1063 173 0 0 chr4 2698196 2698375 -199629972 - AluJb SINE Alu -68 244 66 222 91 0 0 chr4 2699002 2699035 -199629312 + (GGA)n Simple_repeat Simple_repeat 1 33 0 1898 110 14 21 chr4 2699924 2700214 -199628133 + AluSx SINE Alu 1 288 -24 3921 249 104 36 chr4 2700265 2701024 -199627323 - L1MC4 LINE L1 -80 7962 7256 2148 92 17 0 chr4 2701024 2701317 -199627030 - AluSp SINE Alu -15 298 1 3921 249 104 36 chr4 2701317 2702189 -199626158 - L1MC4 LINE L1 -786 7256 6220 967 264 64 94 chr4 2702262 2702487 -199625860 - L1MC4 LINE L1 -797 5349 5119 2055 145 0 0 chr4 2702487 2702790 -199625557 - AluSx SINE Alu -7 305 3 967 264 64 94 chr4 2702790 2702929 -199625418 - L1MC4 LINE L1 -1027 5119 4977 1972 136 0 27 chr4 2702929 2703223 -199625124 + AluJo SINE Alu 3 288 -24 2252 102 10 0 chr4 2703231 2703526 -199624821 + AluSc SINE Alu 1 298 -11 1998 169 3 0 chr4 2703530 2703831 -199624516 + AluSx SINE Alu 1 302 -10 967 264 64 94 chr4 2703831 2704160 -199624187 - L1MC4 LINE L1 -1179 4967 4630 2383 88 3 0 chr4 2704160 2704456 -199623891 - AluY SINE Alu -14 297 1 967 264 64 94 chr4 2704456 2704821 -199623526 - L1MC4 LINE L1 -1516 4630 4256 1894 150 6 29 chr4 2704821 2705134 -199623213 - AluJo SINE Alu -6 306 1 967 264 64 94 chr4 2705134 2705178 -199623169 - L1MC4 LINE L1 -1890 4256 4212 1738 183 13 13 chr4 2705178 2705479 -199622868 + AluJo SINE Alu 9 309 -3 967 264 64 94 chr4 2705479 2705530 -199622817 - L1MC4 LINE L1 -1934 4212 4161 2408 103 3 0 chr4 2705530 2705842 -199622505 - AluSp SINE Alu 0 313 1 967 264 64 94 chr4 2705842 2706098 -199622249 - L1MC4 LINE L1 -1985 4161 3899 2009 115 0 21 chr4 2706098 2706385 -199621962 + AluSx SINE Alu 14 294 -18 967 264 64 94 chr4 2706385 2706644 -199621703 - L1MC4 LINE L1 -2247 3899 3634 1349 142 47 91 chr4 2706644 2706953 -199621394 + MER33 DNA MER1_type 1 295 -2290 2043 111 0 108 chr4 2706953 2707297 -199621050 - AluSx SINE Alu -5 307 1 1349 142 47 91 chr4 2707297 2707326 -199621021 + MER33 DNA MER1_type 295 324 0 967 264 64 94 chr4 2707326 2707366 -199620981 - L1MC4 LINE L1 -2512 3634 3594 2011 138 3 0 chr4 2707366 2707672 -199620675 - AluSq SINE Alu 0 307 1 967 264 64 94 chr4 2707672 2707695 -199620652 - L1MC4 LINE L1 -2552 3594 3572 2235 114 0 9 chr4 2707695 2708011 -199620336 - AluSq SINE Alu 0 313 1 967 264 64 94 chr4 2708011 2708673 -199619674 - L1MC4 LINE L1 -2574 3572 2892 2104 89 14 11 chr4 2708673 2708979 -199619368 + AluSg SINE Alu 1 307 0 967 264 64 94 chr4 2708979 2709410 -199618937 - L1MC4 LINE L1 -3254 2892 2450 2414 97 0 0 chr4 2709410 2709720 -199618627 - AluSg SINE Alu 0 310 1 967 264 64 94 chr4 2709720 2709740 -199618607 - L1MC4 LINE L1 -3696 2450 2431 1787 183 0 13 chr4 2709740 2710052 -199618295 - AluJb SINE Alu -4 308 1 967 264 64 94 chr4 2710052 2710095 -199618252 - L1MC4 LINE L1 -3715 2431 2388 2594 59 0 3 chr4 2710095 2710400 -199617947 - AluY SINE Alu -7 304 1 967 264 64 94 chr4 2710400 2710566 -199617781 - L1MC4 LINE L1 -3758 2388 2219 2335 97 0 0 chr4 2710566 2710888 -199617459 - AluSx SINE Alu 0 312 1 967 264 64 94 chr4 2710888 2710915 -199617432 - L1MC4 LINE L1 -3927 2219 2905 1920 121 81 0 chr4 2710915 2711188 -199617159 + AluSx SINE Alu 1 295 -17 967 264 64 94 chr4 2711188 2711413 -199616934 - L1MC4 LINE L1 -3240 2906 2676 260 222 0 16 chr4 2711448 2711511 -199616836 + (CATATA)n Simple_repeat Simple_repeat 2 63 0 22 0 0 0 chr4 2712043 2712065 -199616282 + AT_rich Low_complexity Low_complexity 1 22 0 2372 99 0 7 chr4 2712069 2712371 -199615976 + AluSx SINE Alu 1 300 -12 2410 78 0 3 chr4 2712375 2712669 -199615678 + AluSc SINE Alu 3 295 -14 1800 163 50 0 chr4 2714429 2714711 -199613636 + AluJb SINE Alu 1 296 -16 331 253 234 7 chr4 2715645 2715799 -199612548 + MER5A DNA MER1_type 1 189 0 2170 123 3 0 chr4 2715924 2716224 -199612123 - AluSx SINE Alu -11 301 1 1888 161 14 0 chr4 2716226 2716512 -199611835 - AluSx SINE Alu -6 306 17 2213 115 0 10 chr4 2716559 2716864 -199611483 + AluSx SINE Alu 1 302 -10 1043 131 0 13 chr4 2716868 2717021 -199611326 + FRAM SINE Alu 13 163 -13 1410 90 0 6 chr4 2717024 2717201 -199611146 - AluSq SINE Alu -135 178 3 293 251 101 52 chr4 2717232 2717559 -199610788 + L1ME3 LINE L1 2938 3280 -2866 388 212 93 34 chr4 2717568 2717686 -199610661 + L1MC5 LINE L1 7807 7931 -30 1750 151 28 14 chr4 2717695 2717980 -199610367 + AluJb SINE Alu 3 291 -21 238 296 116 73 chr4 2718008 2718447 -199609900 + L1ME3 LINE L1 3292 3749 -2397 862 123 0 0 chr4 2718450 2718564 -199609783 + AluSp/q SINE Alu 175 288 -25 337 243 57 64 chr4 2718566 2718706 -199609641 + L1ME3 LINE L1 3710 3848 -2298 2315 85 20 0 chr4 2718712 2719007 -199609340 + AluSp SINE Alu 1 301 -12 303 93 0 0 chr4 2719011 2719054 -199609293 + (TCCC)n Simple_repeat Simple_repeat 4 46 0 1679 161 3 25 chr4 2719057 2719343 -199609004 - AluJb SINE Alu -32 280 1 1873 169 10 0 chr4 2719622 2719912 -199608435 + AluJo SINE Alu 5 297 -15 285 323 62 13 chr4 2719912 2720138 -199608209 + L1ME3 LINE L1 4322 4558 -1588 1590 181 26 36 chr4 2720139 2720279 -199608068 + AluJo SINE Alu 1 141 -171 2706 49 0 0 chr4 2720279 2720585 -199607762 + AluY SINE Alu 1 306 -5 1590 181 26 36 chr4 2720585 2720748 -199607599 + AluJo SINE Alu 141 301 -11 316 306 20 41 chr4 2720890 2721037 -199607310 + L1ME3 LINE L1 5497 5629 -533 312 285 73 61 chr4 2721127 2721292 -199607055 + L1ME3 LINE L1 5804 5970 -192 575 220 55 0 chr4 2722089 2722198 -199606149 - AluJb SINE Alu -195 117 3 2332 82 0 3 chr4 2722235 2722528 -199605819 + AluY SINE Alu 1 292 -19 2228 97 10 3 chr4 2722540 2722830 -199605517 + AluSg1 SINE Alu 1 292 -17 862 103 58 17 chr4 2722831 2723005 -199605342 - LOR1-int LTR ERV1 -2144 4187 4007 896 171 57 0 chr4 2723039 2723197 -199605150 - AluJb SINE Alu -2 310 144 987 155 123 40 chr4 2723206 2723483 -199604864 - LOR1-int LTR ERV1 -3653 4467 4168 501 235 11 74 chr4 2723501 2723786 -199604561 - LOR1-int LTR ERV1 -1907 2973 2707 837 178 40 7 chr4 2723801 2723953 -199604394 + FRAM SINE Alu 1 151 -25 2117 121 0 29 chr4 2724102 2724417 -199603930 - AluSq SINE Alu -7 306 1 22 0 0 0 chr4 2724424 2724446 -199603901 + AT_rich Low_complexity Low_complexity 1 22 0 207 162 0 0 chr4 2724447 2724484 -199603863 + (TA)n Simple_repeat Simple_repeat 2 38 0 1425 134 13 22 chr4 2724491 2724715 -199603632 + AluJo SINE Alu 88 309 -3 610 219 38 104 chr4 2724724 2724952 -199603395 + LTR56 LTR ERV1 58 265 -180 1612 169 6 60 chr4 2724952 2725125 -199603222 - AluJb SINE Alu -15 297 147 2489 70 3 6 chr4 2725125 2725437 -199602910 - AluY SINE Alu 0 311 1 1612 169 6 60 chr4 2725437 2725577 -199602770 - AluJb SINE Alu -165 147 1 610 219 38 104 chr4 2725577 2725635 -199602712 + LTR56 LTR ERV1 265 325 -120 1974 121 3 65 chr4 2725887 2726210 -199602137 + AluSq SINE Alu 1 303 -10 2393 72 7 0 chr4 2726218 2726508 -199601839 + AluSc SINE Alu 1 292 -17 352 271 122 0 chr4 2726875 2726982 -199601365 + MER34B LTR ERV1 5 124 -441 240 108 54 0 chr4 2727130 2727167 -199601180 - FLAM_C SINE Alu 0 170 132 2119 88 51 17 chr4 2727180 2727475 -199600872 - AluSp SINE Alu -8 305 1 551 183 125 17 chr4 2727490 2727610 -199600737 - FLAM_C SINE Alu 0 133 1 1772 154 3 32 chr4 2728139 2728227 -199600120 - AluJb SINE Alu -1 311 222 3992 181 56 1 chr4 2728227 2728923 -199599424 + MER50 LTR ERV1 1 734 0 1772 154 3 32 chr4 2728923 2729146 -199599201 - AluJb SINE Alu -90 222 9 1627 169 17 24 chr4 2729154 2729450 -199598897 - AluJb SINE Alu -18 294 1 326 302 93 14 chr4 2729480 2729619 -199598728 + LTR49-int LTR ERV1 1528 1677 -4654 2333 95 0 0 chr4 2729651 2729947 -199598400 + AluY SINE Alu 1 296 -15 1246 136 23 0 chr4 2729968 2730145 -199598202 + AluSg/x SINE Alu 116 296 -16 2383 109 3 0 chr4 2730157 2730468 -199597879 + AluSq SINE Alu 1 312 -1 959 141 20 0 chr4 2730470 2730619 -199597728 + AluYa8 SINE Alu 139 290 -20 781 138 0 0 chr4 2730619 2730728 -199597619 - AluJb SINE Alu -202 110 2 232 148 49 49 chr4 2730728 2730789 -199597558 - LTR56 LTR ERV1 -384 61 1 226 303 59 0 chr4 2732131 2732250 -199596097 - L2 LINE L2 -716 2598 2473 1142 181 70 31 chr4 2733338 2733565 -199594782 - MER46A DNA MER2_type 0 236 1 1526 235 163 10 chr4 2733631 2734145 -199594202 + L1M4b LINE L1 632 1224 -5635 322 163 23 58 chr4 2734170 2734256 -199594091 + L1M4b LINE L1 1668 1750 -5210 255 204 0 0 chr4 2734264 2734318 -199594029 + (CATATA)n Simple_repeat Simple_repeat 3 56 0 2030 139 0 0 chr4 2734327 2734608 -199593739 - AluSx SINE Alu -31 281 1 751 245 58 0 chr4 2734623 2734864 -199593483 + L1M4b LINE L1 1702 1956 -4899 * 795 227 146 18 chr4 2734863 2735198 -199593149 + L1M4b LINE L1 3826 4203 -2754 1473 217 8 42 chr4 2735198 2735560 -199592787 - MLT1A1 LTR MaLR 0 365 1 2860 208 53 20 chr4 2735560 2736294 -199592053 + L1M4b LINE L1 4199 4956 -2001 1936 100 8 0 chr4 2736295 2736545 -199591802 + AluSg SINE Alu 44 295 -15 2323 82 0 26 chr4 2736549 2736854 -199591493 + AluY SINE Alu 1 297 -14 17749 77 19 24 chr4 2736860 2739108 -199589239 + HERVL LTR ERVL 2875 5134 -520 2386 71 3 10 chr4 2739108 2739405 -199588942 + AluY SINE Alu 1 295 -16 17749 77 19 24 chr4 2739405 2739860 -199588487 + HERVL LTR ERVL 5134 5485 -169 2132 100 13 17 chr4 2739860 2740161 -199588186 + AluSq SINE Alu 1 300 -13 17749 77 19 24 chr4 2740161 2740331 -199588016 + HERVL LTR ERVL 5485 5654 0 3378 49 30 5 chr4 2740333 2740764 -199587583 + MLT2A1 LTR ERVL 3 444 0 2232 99 7 30 chr4 2747413 2747580 -199580767 - AluSq SINE Alu -16 297 139 2405 61 0 51 chr4 2747580 2747891 -199580456 - AluY SINE Alu -16 295 1 2232 99 7 30 chr4 2747891 2748026 -199580321 - AluSq SINE Alu -174 139 2 1983 138 20 3 chr4 2748028 2748325 -199580022 - AluJb SINE Alu -10 302 1 757 136 0 32 chr4 2748378 2748503 -199579844 - FLAM_A SINE Alu -11 122 2 1361 229 87 33 chr4 2748568 2749003 -199579344 + MLT1C LTR MaLR 1 467 0 1730 184 32 0 chr4 2749054 2749336 -199579011 - AluJb SINE Alu -21 291 1 356 0 23 0 chr4 2749631 2749675 -199578672 + (TTA)n Simple_repeat Simple_repeat 2 46 0 753 218 0 0 chr4 2749675 2749808 -199578539 - AluJo/FRAM SINE Alu -27 285 153 387 138 31 0 chr4 2749808 2749873 -199578474 + AluJb SINE Alu 211 277 -25 572 118 0 32 chr4 2749913 2750006 -199578341 - FLAM_A SINE Alu -8 134 45 361 182 0 0 chr4 2750675 2750741 -199577606 - MLT1C LTR MaLR -10 457 392 1981 94 19 11 chr4 2750743 2751008 -199577339 + AluJo SINE Alu 21 287 -25 180 111 0 0 chr4 2751008 2751035 -199577312 + (GGGGA)n Simple_repeat Simple_repeat 4 30 0 247 109 0 55 chr4 2751037 2751058 -199577289 + (GAAAA)n Simple_repeat Simple_repeat 3 24 -30 2254 103 3 3 chr4 2751058 2751368 -199576979 + AluSg SINE Alu 1 310 0 247 109 0 55 chr4 2751368 2751401 -199576946 + (GAAAA)n Simple_repeat Simple_repeat 24 54 0 1595 162 0 87 chr4 2752002 2752335 -199576012 + AluJo SINE Alu 7 310 -2 2049 142 0 16 chr4 2752392 2752674 -199575673 + AluJo SINE Alu 2 301 -11 22 0 0 0 chr4 2752674 2752696 -199575651 + AT_rich Low_complexity Low_complexity 1 22 0 2049 142 0 16 chr4 2752696 2752708 -199575639 + AluJo SINE Alu 301 312 0 280 322 35 35 chr4 2753161 2753323 -199575024 + L1ME4a LINE L1 5896 6091 -30 21 36 0 0 chr4 2753323 2753351 -199574996 + AT_rich Low_complexity Low_complexity 1 28 0 280 322 35 35 chr4 2753351 2753367 -199574980 + L1ME4a LINE L1 6091 6105 -16 2426 54 3 0 chr4 2753650 2753947 -199574400 - AluY SINE Alu -11 300 3 1785 158 10 3 chr4 2753960 2754258 -199574089 - AluJb SINE Alu -12 300 1 24 32 0 0 chr4 2755533 2755564 -199572783 + GC_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr4 2755569 2755598 -199572749 + GC_rich Low_complexity Low_complexity 1 29 0 225 199 21 28 chr4 2755639 2755780 -199572567 + (CCCCG)n Simple_repeat Simple_repeat 5 144 0 2287 72 3 10 chr4 2756148 2756454 -199571893 - AluSq SINE Alu -1 312 9 210 301 49 77 chr4 2756910 2757053 -199571294 + MIR SINE MIR 100 238 -24 234 253 46 58 chr4 2757124 2757211 -199571136 + MIR SINE MIR 56 141 -67 658 237 74 86 chr4 2757225 2757268 -199571079 - MER46C DNA MER2_type -4 334 292 270 81 0 0 chr4 2757268 2757305 -199571042 + (TATTG)n Simple_repeat Simple_repeat 1 37 0 2106 93 3 7 chr4 2757306 2757596 -199570751 - AluSx SINE Alu -23 289 1 658 237 74 86 chr4 2757596 2757650 -199570697 - MER46C DNA MER2_type -46 292 239 2592 222 38 11 chr4 2757650 2758176 -199570171 + MLT1F LTR MaLR 1 540 -2 658 237 74 86 chr4 2758176 2758352 -199569995 - MER46C DNA MER2_type -99 239 60 1769 167 13 7 chr4 2758352 2758657 -199569690 + AluJo SINE Alu 1 307 -5 658 237 74 86 chr4 2758657 2758716 -199569631 - MER46C DNA MER2_type -278 60 2 2311 89 0 0 chr4 2758946 2759249 -199569098 + AluSx SINE Alu 1 303 -9 213 39 0 0 chr4 2759414 2759440 -199568907 + (TCCC)n Simple_repeat Simple_repeat 3 28 0 2111 127 13 0 chr4 2759452 2759751 -199568596 - AluSx SINE Alu -9 303 1 1246 221 202 12 chr4 2759788 2760262 -199568085 + MER77 LTR ERV1 1 547 -15 264 334 85 5 chr4 2760562 2760762 -199567585 + L2 LINE L2 2804 3015 -257 248 330 62 0 chr4 2760767 2760879 -199567468 + L2 LINE L2 2858 2976 -296 344 339 23 18 chr4 2761347 2761518 -199566829 - L2 LINE L2 -294 3019 2848 2850 116 112 71 chr4 2761588 2762642 -199565705 - pTR5 LTR ERV1 -1 2437 970 1014 87 25 6 chr4 2762619 2762780 -199565567 + pTR5 LTR ERV1 229 392 -2046 * 211 221 29 0 chr4 2763567 2763635 -199564712 + (CCCCG)n Simple_repeat Simple_repeat 4 73 0 1561 87 5 5 chr4 2763724 2763931 -199564416 - AluSg/x SINE Alu -24 288 82 2331 64 7 7 chr4 2764590 2764887 -199563460 - AluY SINE Alu -14 297 1 1828 117 10 52 chr4 2764891 2765198 -199563149 - AluJb SINE Alu -18 294 1 618 256 133 5 chr4 2765421 2765687 -199562660 - L2 LINE L2 -284 3029 2726 267 348 27 27 chr4 2765687 2765799 -199562548 - L2 LINE L2 -701 2613 2502 1829 204 34 50 chr4 2765812 2766317 -199562030 + MLT1D LTR MaLR 9 505 0 248 286 32 56 chr4 2766320 2766446 -199561901 - L2 LINE L2 -823 2491 2369 231 239 28 28 chr4 2766482 2766553 -199561794 + L2 LINE L2 3202 3272 0 2972 233 170 101 chr4 2768062 2768863 -199559484 + HAL1 LINE L1 258 1002 -1505 854 146 0 0 chr4 2768863 2768993 -199559354 + FLAM_A SINE Alu 8 137 -5 2972 233 170 101 chr4 2768993 2769150 -199559197 + HAL1 LINE L1 1002 1147 -1360 2173 101 34 0 chr4 2769150 2769446 -199558901 + AluSx SINE Alu 1 306 -6 2972 233 170 101 chr4 2769446 2769598 -199558749 + HAL1 LINE L1 1147 1287 -1220 2102 118 0 3 chr4 2769598 2769894 -199558453 + AluSq SINE Alu 1 295 -18 2972 233 170 101 chr4 2769894 2770723 -199557624 + HAL1 LINE L1 1287 2479 -28 1860 168 23 13 chr4 2770723 2771032 -199557315 + AluJo SINE Alu 1 312 0 2972 233 170 101 chr4 2771032 2771064 -199557283 + HAL1 LINE L1 2479 2507 0 2238 96 0 0 chr4 2771436 2771729 -199556618 - AluSx SINE Alu -19 293 1 1564 197 62 75 chr4 2771879 2771955 -199556392 - MSTD LTR MaLR 0 396 321 2277 90 3 0 chr4 2771955 2772265 -199556082 - AluY SINE Alu 0 311 1 1564 197 62 75 chr4 2772265 2772589 -199555758 - MSTD LTR MaLR -75 321 1 1733 173 3 10 chr4 2772595 2772901 -199555446 - AluJo SINE Alu -8 304 1 231 36 0 0 chr4 2772904 2772932 -199555415 + (ATTG)n Simple_repeat Simple_repeat 2 29 0 832 113 0 0 chr4 2772932 2773047 -199555300 - AluJb SINE Alu -26 286 172 543 247 98 60 chr4 2773157 2773286 -199555061 + MER57-int LTR ERV1 56 199 -7338 2363 63 0 3 chr4 2773286 2773586 -199554761 + AluY SINE Alu 1 299 -12 543 247 98 60 chr4 2773586 2773691 -199554656 + MER57-int LTR ERV1 199 299 -7238 2357 81 0 0 chr4 2773701 2773998 -199554349 - AluSg1 SINE Alu -12 297 1 958 288 47 35 chr4 2774043 2774244 -199554103 + MER57-int LTR ERV1 2411 2608 -4929 2435 50 0 13 chr4 2774244 2774546 -199553801 - AluSc SINE Alu -11 298 1 958 288 47 35 chr4 2774546 2774947 -199553400 + MER57-int LTR ERV1 2608 6190 -1347 2291 100 0 0 chr4 2775143 2775444 -199552903 + AluSx SINE Alu 1 301 -11 1641 154 50 0 chr4 2775486 2775766 -199552581 - AluJo SINE Alu -11 301 8 2210 120 3 0 chr4 2775806 2776106 -199552241 - AluSx SINE Alu -11 301 1 2362 93 0 0 chr4 2776311 2776622 -199551725 - AluY SINE Alu 0 311 1 4442 77 42 32 chr4 2776622 2776943 -199551404 - MER4-int LTR ERV1 -1786 4812 4496 2122 138 0 6 chr4 2776943 2777255 -199551092 - AluSx SINE Alu 0 312 3 4442 77 42 32 chr4 2777255 2777688 -199550659 - MER4-int LTR ERV1 -2102 4496 4050 2015 192 39 94 chr4 2777691 2778232 -199550115 - LTR9 LTR ERV1 -11 601 99 2211 128 0 0 chr4 2778232 2778544 -199549803 - AluSq SINE Alu -1 312 1 2015 192 39 94 chr4 2778544 2778638 -199549709 - LTR9 LTR ERV1 -513 99 1 528 128 0 11 chr4 2778638 2778732 -199549615 - MER4A-int LTR ERV1 -2545 4053 3961 1599 69 15 0 chr4 2778743 2778946 -199549401 - AluSq SINE Alu -107 206 1 4579 131 86 78 chr4 2778972 2779038 -199549309 - MER4A-int LTR ERV1 -4231 1242 1178 2129 130 0 3 chr4 2779038 2779338 -199549009 + AluSx SINE Alu 1 299 -13 4579 131 86 78 chr4 2779338 2779418 -199548929 - MER4A-int LTR ERV1 -4295 1178 1100 2365 97 0 0 chr4 2779418 2779727 -199548620 + AluY SINE Alu 1 309 -2 4579 131 86 78 chr4 2779727 2780147 -199548200 - MER4A-int LTR ERV1 -4373 1100 684 1902 81 0 0 chr4 2780147 2780383 -199547964 + AluSx SINE Alu 1 236 -76 4579 131 86 78 chr4 2780383 2780473 -199547874 - MER4A-int LTR ERV1 -4789 684 596 351 0 0 0 chr4 2780473 2780512 -199547835 + (TG)n Simple_repeat Simple_repeat 1 39 0 4579 131 86 78 chr4 2780512 2781167 -199547180 - MER4A-int LTR ERV1 -4877 596 1 1552 131 3 83 chr4 2781170 2781551 -199546796 - MER4A LTR ERV1 0 664 256 507 141 10 20 chr4 2781546 2781645 -199546702 - MER4A LTR ERV1 -566 98 1 * 9929 97 46 16 chr4 2781645 2783797 -199544550 - L1PBa LINE L1 -3458 3404 995 1201 131 0 5 chr4 2783793 2783992 -199544355 - L1PBa LINE L1 -6665 198 1 * 2169 101 10 0 chr4 2784003 2784309 -199544038 - AluSx SINE Alu -3 309 1 888 301 17 23 chr4 2784395 2784747 -199543600 + MER57-int LTR ERV1 6794 7143 -394 270 284 0 0 chr4 2784759 2784833 -199543514 + MER57A LTR ERV1 42 115 -288 961 184 107 8 chr4 2784941 2785185 -199543162 + MER57A LTR ERV1 132 399 -4 1648 98 9 0 chr4 2785194 2785418 -199542929 - AluSg SINE Alu -1 311 86 1575 127 89 55 chr4 2788302 2788593 -199539754 + AluJb SINE Alu 5 305 -7 571 302 208 12 chr4 2788680 2789198 -199539149 - L2 LINE L2 -280 3033 2414 286 191 0 43 chr4 2792198 2792292 -199536055 + (CGGGG)n Simple_repeat Simple_repeat 2 91 0 233 154 0 22 chr4 2793211 2793273 -199535074 + MIR SINE MIR 90 148 -114 344 358 37 10 chr4 2794153 2794326 -199534021 + MIR SINE MIR 7 181 -61 483 87 87 0 chr4 2794647 2794716 -199533631 - AluSg SINE Alu -233 76 2 246 216 68 27 chr4 2795344 2795418 -199532929 + MIR SINE MIR 89 165 -97 1966 132 7 0 chr4 2801058 2801347 -199527000 + AluSx SINE Alu 1 291 -21 2032 113 18 0 chr4 2801349 2801633 -199526714 + AluSx SINE Alu 1 289 -23 420 20 0 0 chr4 2801637 2801686 -199526661 + (TG)n Simple_repeat Simple_repeat 2 50 0 403 311 0 0 chr4 2801688 2801778 -199526569 + L1MC4 LINE L1 6614 6703 -1339 367 356 0 0 chr4 2801770 2801860 -199526487 - L1MC4 LINE L1 -1339 6703 6614 * 378 260 0 13 chr4 2801841 2801942 -199526405 + L1MC4 LINE L1 1996 6983 -1339 314 356 0 11 chr4 2801862 2801952 -199526395 - L1MC4 LINE L1 -1339 6703 6615 * 273 169 70 28 chr4 2802748 2802819 -199525528 - MIR SINE MIR -87 121 48 194 231 0 0 chr4 2805289 2805328 -199523019 - MIR SINE MIR -61 147 109 214 329 13 0 chr4 2805802 2805878 -199522469 + (CACCC)n Simple_repeat Simple_repeat 4 80 0 1278 269 75 18 chr4 2807277 2807719 -199520628 - MLT1C LTR MaLR 0 467 1 216 179 0 0 chr4 2812245 2812284 -199516063 + MIR SINE MIR 67 105 -157 180 339 76 8 chr4 2812400 2812518 -199515829 + MIR SINE MIR 103 228 -34 357 356 0 6 chr4 2812612 2812789 -199515558 + (TG)n Simple_repeat Simple_repeat 1 176 0 228 67 0 0 chr4 2813442 2813472 -199514875 + (CA)n Simple_repeat Simple_repeat 1 30 0 183 274 24 113 chr4 2814776 2814900 -199513447 - L2 LINE L2 -145 3127 3015 3103 188 61 7 chr4 2814901 2815003 -199513344 - L1M4 LINE L1 -1774 4372 4277 2068 82 53 4 chr4 2815003 2815284 -199513063 - AluSq SINE Alu -18 295 1 3103 188 61 7 chr4 2815284 2815940 -199512407 - L1M4 LINE L1 -1869 4277 3573 22 35 0 0 chr4 2817066 2817095 -199511252 + GC_rich Low_complexity Low_complexity 1 29 0 44 75 0 0 chr4 2817169 2817262 -199511085 + GC_rich Low_complexity Low_complexity 1 93 0 1403 166 50 13 chr4 2817862 2818163 -199510184 - AluJo SINE Alu 0 312 1 1247 153 0 23 chr4 2818164 2818380 -199509967 - AluJo SINE Alu -15 297 87 1718 140 66 14 chr4 2820499 2820785 -199507562 - AluJb SINE Alu -11 301 1 1258 139 42 14 chr4 2820787 2820798 -199507549 - AluJb SINE Alu -4 308 299 2161 114 10 0 chr4 2820798 2821105 -199507242 - AluSx SINE Alu -2 310 1 1258 139 42 14 chr4 2821105 2821309 -199507038 - AluJb SINE Alu -13 299 87 1037 127 13 6 chr4 2821316 2821474 -199506873 - AluSg/x SINE Alu -17 293 135 260 274 9 19 chr4 2824295 2824401 -199503946 + (CA)n Simple_repeat Simple_repeat 2 106 0 271 178 30 30 chr4 2824414 2824549 -199503798 + (CA)n Simple_repeat Simple_repeat 2 136 0 205 199 28 28 chr4 2825184 2825325 -199503022 + (TG)n Simple_repeat Simple_repeat 2 142 0 338 173 29 29 chr4 2825396 2825569 -199502778 + (TG)n Simple_repeat Simple_repeat 2 174 0 409 306 0 16 chr4 2825582 2825765 -199502582 + (TG)n Simple_repeat Simple_repeat 1 180 0 231 282 0 0 chr4 2825837 2825986 -199502361 + (TG)n Simple_repeat Simple_repeat 2 150 0 273 302 0 0 chr4 2825997 2826083 -199502264 + (TG)n Simple_repeat Simple_repeat 1 86 0 183 80 0 0 chr4 2826963 2826988 -199501359 + (CATCC)n Simple_repeat Simple_repeat 3 27 0 195 42 0 0 chr4 2827109 2827133 -199501214 + (TCCC)n Simple_repeat Simple_repeat 4 27 0 2125 119 0 3 chr4 2829275 2829577 -199498770 - AluSx SINE Alu -11 301 1 212 290 0 0 chr4 2832084 2832146 -199496201 + C-rich Low_complexity Low_complexity 3 64 0 811 165 0 8 chr4 2832220 2832353 -199495994 - FLAM_C SINE Alu -1 132 1 247 264 0 0 chr4 2832526 2832579 -199495768 - MIR SINE MIR -62 146 94 250 320 82 0 chr4 2833341 2833438 -199494909 - MIR SINE MIR -156 106 2 2228 100 0 3 chr4 2834531 2834840 -199493507 - AluSx SINE Alu -4 308 1 203 271 0 0 chr4 2835365 2835413 -199492934 - MIR SINE MIR -107 155 108 * 325 176 54 0 chr4 2835409 2835483 -199492864 + MIR SINE MIR 44 121 -87 255 239 0 5 chr4 2835720 2835785 -199492562 - MIR3 SINE MIR -52 156 92 1806 114 64 0 chr4 2835961 2836242 -199492105 - AluSx SINE Alu -13 299 1 1650 252 81 62 chr4 2837023 2837458 -199490889 - L1ME3A LINE L1 0 6239 5814 1282 97 126 14 chr4 2837458 2837665 -199490682 - MER30 DNA MER1_type 0 230 1 1650 252 81 62 chr4 2837665 2838075 -199490272 - L1ME3A LINE L1 -425 5814 5413 1771 151 20 7 chr4 2838075 2838373 -199489974 - AluJb SINE Alu 0 312 11 1650 252 81 62 chr4 2838373 2838479 -199489868 - L1ME3A LINE L1 -826 5413 5310 1521 187 17 27 chr4 2838479 2838773 -199489574 - AluJo SINE Alu -15 297 7 1650 252 81 62 chr4 2838773 2838859 -199489488 - L1ME3A LINE L1 -929 5310 5227 2155 132 3 0 chr4 2838859 2839170 -199489177 + AluJb SINE Alu 1 312 0 1650 252 81 62 chr4 2839170 2839949 -199488398 - L1ME3A LINE L1 -1012 5227 4385 435 295 199 67 chr4 2839949 2840295 -199488052 - L1ME3A LINE L1 -4112 2284 1893 1862 145 13 7 chr4 2840307 2840611 -199487736 - AluSx SINE Alu -4 308 3 2718 156 125 6 chr4 2840666 2841041 -199487306 - L1MB3 LINE L1 -1 6182 5853 1951 113 13 27 chr4 2841041 2841341 -199487006 + AluJo SINE Alu 14 309 -3 2718 156 125 6 chr4 2841341 2841595 -199486752 - L1MB3 LINE L1 -330 5853 5478 705 196 21 7 chr4 2841625 2841768 -199486579 - BC200 scRNA scRNA -54 146 2 412 234 32 0 chr4 2841768 2841862 -199486485 - L1MB3 LINE L1 -686 5488 5392 297 255 21 7 chr4 2842953 2843098 -199485249 + (CGG)n Simple_repeat Simple_repeat 3 149 0 180 218 36 0 chr4 2843874 2843929 -199484418 - L2 LINE L2 -266 3006 2950 2425 52 0 0 chr4 2843997 2844286 -199484061 - AluSc SINE Alu -20 289 1 588 244 189 13 chr4 2844924 2845306 -199483041 - L1MC5 LINE L1 -209 7752 7304 670 241 47 4 chr4 2845353 2845589 -199482758 - L1MC5 LINE L1 -731 7230 6985 600 210 148 31 chr4 2845589 2845751 -199482596 + AluJb SINE Alu 121 301 -11 2421 70 0 6 chr4 2845751 2846063 -199482284 + AluY SINE Alu 1 310 -1 1873 108 75 0 chr4 2846063 2846340 -199482007 + AluSq SINE Alu 1 299 -14 1582 150 6 27 chr4 2846479 2846835 -199481512 - MER4A LTR ERV1 -1 663 257 2222 105 7 0 chr4 2846849 2847144 -199481203 + AluSx SINE Alu 1 297 -15 1395 221 3 33 chr4 2847391 2847694 -199480653 - AluJo SINE Alu -18 294 1 404 301 43 0 chr4 2847694 2847857 -199480490 - L1MC5 LINE L1 -2072 5736 5567 417 313 89 0 chr4 2847868 2848047 -199480300 - L1ME LINE L1 -422 5699 5505 245 196 216 21 chr4 2848068 2848165 -199480182 + MIR SINE MIR 147 262 0 1983 170 29 52 chr4 2848893 2849180 -199479167 + L1MB7 LINE L1 5657 5930 -254 2113 104 6 41 chr4 2849180 2849350 -199478997 - AluSx SINE Alu -7 305 150 2487 45 0 0 chr4 2849350 2849642 -199478705 - AluY SINE Alu -19 292 1 2113 104 6 41 chr4 2849642 2849787 -199478560 - AluSx SINE Alu -162 150 1 1983 170 29 52 chr4 2849787 2849981 -199478366 + L1MB7 LINE L1 5930 6127 -57 822 210 13 6 chr4 2849981 2850138 -199478209 - FRAM SINE Alu -26 150 1 272 247 34 22 chr4 2850146 2850235 -199478112 + MIR SINE MIR 68 157 -105 2330 70 20 0 chr4 2850755 2851053 -199477294 - AluSp SINE Alu -9 304 1 957 80 11 34 chr4 2851056 2851231 -199477116 + (TTTC)n Simple_repeat Simple_repeat 2 172 0 1403 123 0 5 chr4 2851233 2851444 -199476903 - AluSg/x SINE Alu -1 309 100 1129 165 17 48 chr4 2851612 2851842 -199476505 - AluJo SINE Alu -8 304 82 2080 107 10 3 chr4 2852025 2852315 -199476032 - AluSx SINE Alu -11 301 10 538 283 81 40 chr4 2852321 2852509 -199475838 - L1MEc LINE L1 -3113 3102 2923 2159 128 0 0 chr4 2852509 2852821 -199475526 - AluSq SINE Alu -1 312 1 538 283 81 40 chr4 2852821 2852957 -199475390 - L1MEc LINE L1 -3292 2923 2794 2110 120 0 7 chr4 2852957 2853240 -199475107 + AluSx SINE Alu 1 281 -31 180 97 0 0 chr4 2853241 2853272 -199475075 + (CAAG)n Simple_repeat Simple_repeat 2 32 0 538 283 81 40 chr4 2853272 2853692 -199474655 - L1MEc LINE L1 -3421 2794 2315 1656 206 88 30 chr4 2853692 2854167 -199474180 - MLT1D LTR MaLR 0 505 3 538 283 81 40 chr4 2854167 2854186 -199474161 - L1MEc LINE L1 -3900 2315 2298 322 190 0 0 chr4 2854553 2854611 -199473736 - FAM SINE Alu -2 177 120 1817 161 10 3 chr4 2854615 2854906 -199473441 - AluJb SINE Alu -9 303 11 305 100 0 0 chr4 2854909 2854949 -199473398 + AluSp SINE Alu 140 179 -124 23 0 0 0 chr4 2854967 2854990 -199473357 + AT_rich Low_complexity Low_complexity 1 23 0 752 130 9 17 chr4 2854990 2855105 -199473242 - AluJb SINE Alu -194 118 5 565 249 88 42 chr4 2855119 2855449 -199472898 - L1MEc LINE L1 -4765 1631 1287 2239 128 3 0 chr4 2855502 2855808 -199472539 - AluSx SINE Alu -5 307 1 2355 102 0 3 chr4 2855826 2856129 -199472218 - AluSg SINE Alu -8 302 1 1621 172 11 0 chr4 2856274 2856535 -199471812 + AluJo SINE Alu 29 292 -20 606 270 137 5 chr4 2857191 2857395 -199470952 - MIR SINE MIR 0 262 32 640 218 15 0 chr4 2857625 2857758 -199470589 + FLAM_C SINE Alu 2 136 -7 309 252 96 35 chr4 2857780 2857895 -199470452 - MIR SINE MIR -29 233 112 272 143 41 0 chr4 2858484 2858533 -199469814 + Alu SINE Alu 244 294 -8 292 303 115 0 chr4 2859488 2859610 -199468737 - L2 LINE L2 0 3313 3178 643 229 204 10 chr4 2859629 2859830 -199468517 - MIR SINE MIR -2 260 21 529 293 33 53 chr4 2859835 2860135 -199468212 - L2 LINE L2 -172 3141 2848 423 141 99 0 chr4 2860215 2860286 -199468061 - AluJ/FLAM SINE Alu -230 82 5 883 255 53 67 chr4 2860382 2860533 -199467814 - L2 LINE L2 -947 2367 2215 592 250 65 6 chr4 2860533 2860701 -199467646 - MER5B DNA MER1_type 0 178 1 883 255 53 67 chr4 2860701 2860756 -199467591 - L2 LINE L2 -1099 2215 2161 1356 76 167 5 chr4 2860756 2860954 -199467393 - MER30 DNA MER1_type 0 230 1 883 255 53 67 chr4 2860954 2861178 -199467169 - L2 LINE L2 -1153 2161 1942 359 285 99 90 chr4 2861394 2861826 -199466521 + L2 LINE L2 2875 3310 -3 1573 163 21 52 chr4 2861979 2862268 -199466079 - AluJo SINE Alu -23 289 10 227 29 57 0 chr4 2862632 2862667 -199465680 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 749 155 0 0 chr4 2862670 2862786 -199465561 - FLAM_A SINE Alu -17 116 1 180 238 0 0 chr4 2862786 2862828 -199465519 - MIR SINE MIR -111 151 110 2021 98 11 18 chr4 2863049 2863359 -199464988 + AluSx SINE Alu 1 308 0 300 198 20 0 chr4 2863736 2863813 -199464534 - FLAM_A SINE Alu -3 130 66 21 49 0 49 chr4 2863818 2863879 -199464468 + AT_rich Low_complexity Low_complexity 1 58 0 27 0 0 0 chr4 2864735 2864762 -199463585 + AT_rich Low_complexity Low_complexity 1 27 0 2055 115 7 30 chr4 2865089 2865394 -199462953 - AluSx SINE Alu -14 298 1 305 202 167 0 chr4 2865484 2865568 -199462779 - L2 LINE L2 0 3272 3175 1856 150 3 3 chr4 2865724 2866011 -199462336 + AluJb SINE Alu 18 304 -8 203 356 20 10 chr4 2866373 2866474 -199461873 + MIR SINE MIR 13 114 -148 183 343 14 0 chr4 2866739 2866812 -199461535 + MIR SINE MIR 20 93 -169 230 347 40 16 chr4 2867536 2867660 -199460687 - L2 LINE L2 -25 3247 3121 2347 161 64 7 chr4 2868067 2868507 -199459840 - MLT1C LTR MaLR -2 465 1 2379 81 0 10 chr4 2869881 2870189 -199458158 - AluY SINE Alu -6 305 1 22 35 0 0 chr4 2870359 2870388 -199457959 + AT_rich Low_complexity Low_complexity 1 29 0 286 314 105 12 chr4 2870535 2870707 -199457640 - L1MC5 LINE L1 -54 7907 7720 519 141 21 70 chr4 2870722 2870864 -199457483 - L1MC5 LINE L1 -287 7674 7540 427 226 51 67 chr4 2870872 2871067 -199457280 - L2 LINE L2 -573 2741 2550 1606 183 7 14 chr4 2871483 2871778 -199456569 - AluJb SINE Alu -19 293 1 32 26 0 0 chr4 2871787 2871826 -199456521 + AT_rich Low_complexity Low_complexity 1 39 0 22 56 0 0 chr4 2871888 2871924 -199456423 + AT_rich Low_complexity Low_complexity 1 36 0 1803 168 7 0 chr4 2871924 2872209 -199456138 - AluSx SINE Alu -24 288 2 1716 164 3 24 chr4 2872859 2873152 -199455195 + AluJo SINE Alu 14 300 -12 2392 79 7 0 chr4 2873243 2873546 -199454801 + AluSx SINE Alu 1 305 -7 446 231 10 0 chr4 2873718 2873819 -199454528 + MER5A DNA MER1_type 11 101 -77 1564 184 0 7 chr4 2873867 2874144 -199454203 + AluJb SINE Alu 5 279 -33 2322 96 0 10 chr4 2875338 2875473 -199452874 + AluSx SINE Alu 1 136 -176 2441 64 0 10 chr4 2875473 2875771 -199452576 + AluY SINE Alu 1 295 -16 2322 96 0 10 chr4 2875771 2875938 -199452409 + AluSx SINE Alu 136 300 -12 188 304 101 0 chr4 2876226 2876305 -199452042 - L2 LINE L2 -12 3301 3215 387 213 96 0 chr4 2876329 2876423 -199451924 - L1ME3 LINE L1 -7 6155 6053 729 311 107 48 chr4 2876519 2876622 -199451725 - L2 LINE L2 -255 3058 2962 1794 132 70 0 chr4 2876622 2876895 -199451452 + AluJb SINE Alu 1 292 -20 729 311 107 48 chr4 2876895 2877382 -199450965 - L2 LINE L2 -351 2962 2435 344 176 68 0 chr4 2877460 2877534 -199450813 - L2 LINE L2 -27 3286 3208 844 161 0 0 chr4 2877562 2877686 -199450661 + FRAM SINE Alu 1 124 -52 431 272 159 28 chr4 2877714 2878078 -199450269 - L2 LINE L2 -2242 1072 661 269 340 30 10 chr4 2878262 2878362 -199449985 + L2 LINE L2 3139 3240 -32 1239 99 0 0 chr4 2878549 2878701 -199449646 - AluSg/x SINE Alu -20 292 141 1632 133 0 4 chr4 2878701 2878934 -199449413 - AluSx SINE Alu -80 232 1 2715 48 0 0 chr4 2879382 2879693 -199448654 - AluY SINE Alu 0 311 1 316 177 24 171 chr4 2879870 2879991 -199448356 - L1ME4a LINE L1 -32 6089 5996 2407 94 0 3 chr4 2879991 2880298 -199448049 - AluSx SINE Alu -6 306 1 316 177 24 171 chr4 2880298 2880340 -199448007 - L1ME4a LINE L1 -125 5996 5950 699 251 129 8 chr4 2880466 2880721 -199447626 - L1ME4a LINE L1 -348 5773 5488 2059 134 3 7 chr4 2881774 2882081 -199446266 - AluSx SINE Alu -6 306 1 580 186 143 74 chr4 2882082 2882313 -199446034 - L1MC5 LINE L1 -808 7153 6907 394 267 25 0 chr4 2882312 2882432 -199445915 - L1ME4a LINE L1 -2174 3972 3850 * 661 188 0 8 chr4 2882442 2882570 -199445777 - FRAM SINE Alu -1 175 49 2444 82 0 0 chr4 2882585 2882890 -199445457 - AluY SINE Alu -6 305 1 23 33 0 0 chr4 2882944 2882974 -199445373 + AT_rich Low_complexity Low_complexity 1 30 0 271 218 119 0 chr4 2883021 2883122 -199445225 - L1ME4a LINE L1 -3105 3041 2929 714 172 112 0 chr4 2883275 2883409 -199444938 - FAM SINE Alu -36 149 1 198 200 62 46 chr4 2884256 2884321 -199444026 + L2 LINE L2 1217 1282 -2032 2586 44 0 3 chr4 2884532 2884829 -199443518 - AluY SINE Alu -15 296 1 287 254 149 22 chr4 2885420 2885601 -199442746 + L2 LINE L2 3109 3312 -1 1827 132 0 62 chr4 2886974 2887298 -199441049 - AluSx SINE Alu 0 305 1 324 0 0 0 chr4 2887320 2887356 -199440991 + (TTA)n Simple_repeat Simple_repeat 2 37 0 2028 124 3 7 chr4 2887358 2887640 -199440707 - AluSx SINE Alu -31 281 1 560 293 77 50 chr4 2887910 2888462 -199439885 + L1ME LINE L1 4615 5151 -1011 2013 124 10 10 chr4 2888462 2888752 -199439595 + AluSx SINE Alu 1 290 -22 560 293 77 50 chr4 2888752 2888839 -199439508 + L1ME LINE L1 5151 5234 -928 2154 112 17 0 chr4 2888839 2889135 -199439212 + AluSx SINE Alu 1 301 -11 560 293 77 50 chr4 2889135 2889327 -199439020 + L1ME LINE L1 5234 5468 -694 2224 99 3 7 chr4 2889327 2889630 -199438717 - AluY SINE Alu -9 302 1 866 153 0 29 chr4 2889925 2890062 -199438285 + FLAM_C SINE Alu 1 133 0 2105 116 23 13 chr4 2890089 2890392 -199437955 + AluSx SINE Alu 1 306 -6 327 259 111 44 chr4 2890603 2890738 -199437609 - MIR SINE MIR -115 147 4 272 305 130 11 chr4 2890754 2890931 -199437416 + L3 LINE CR1 1205 1402 -175 231 356 22 37 chr4 2891019 2891154 -199437193 + L3 LINE CR1 1423 1555 -22 274 232 98 0 chr4 2891275 2891357 -199436990 + L2 LINE L2 3190 3279 -34 1932 145 10 19 chr4 2891474 2891785 -199436562 + AluJo SINE Alu 5 312 0 1679 143 3 44 chr4 2891814 2892151 -199436196 - AluSx SINE Alu 0 325 1 2006 146 0 10 chr4 2892250 2892551 -199435796 + AluJb SINE Alu 1 298 -14 376 149 402 0 chr4 2893236 2893323 -199435024 + FLAM_C SINE Alu 5 126 -7 650 123 105 0 chr4 2893346 2893460 -199434887 + AluSg/x SINE Alu 184 309 -1 1755 161 23 7 chr4 2893901 2894205 -199434142 + AluJo SINE Alu 1 309 -3 2505 64 0 0 chr4 2894812 2895109 -199433238 - AluY SINE Alu -14 297 1 2150 130 0 0 chr4 2895138 2895431 -199432916 - AluSx SINE Alu -19 293 1 1864 167 3 3 chr4 2895682 2895981 -199432366 - AluSx SINE Alu -13 299 1 35 54 0 0 chr4 2896300 2896356 -199431991 + AT_rich Low_complexity Low_complexity 1 56 0 1140 176 132 37 chr4 2896470 2896743 -199431604 - AluJo SINE Alu 0 302 4 219 311 82 0 chr4 2899803 2899864 -199428483 - L2 LINE L2 -71 3201 3136 742 138 98 0 chr4 2900590 2900713 -199427634 + AluJo SINE Alu 1 135 -177 795 187 0 15 chr4 2900845 2900979 -199427368 - FLAM_C SINE Alu -1 132 1 2082 109 32 0 chr4 2901381 2901666 -199426681 + AluSx SINE Alu 1 294 -18 2302 111 0 13 chr4 2901669 2901984 -199426363 + AluY SINE Alu 1 311 0 905 248 63 4 chr4 2902247 2902485 -199425862 - MLT1E LTR MaLR -1 592 341 485 223 223 45 chr4 2902494 2902696 -199425651 - MLT1E LTR MaLR -355 238 1 1499 286 70 16 chr4 2903058 2903632 -199424715 - L1ME3A LINE L1 -2 6168 5564 227 288 14 13 chr4 2905198 2905288 -199423059 + CT-rich Low_complexity Low_complexity 1 90 0 21 0 0 0 chr4 2905644 2905665 -199422682 + AT_rich Low_complexity Low_complexity 1 21 0 1776 140 0 33 chr4 2910373 2910680 -199417667 - AluJb SINE Alu -14 298 2 1880 169 7 0 chr4 2911443 2911751 -199416596 - AluJb SINE Alu -2 310 1 2025 137 0 9 chr4 2911757 2912072 -199416275 - AluSx SINE Alu 0 312 1 1343 54 0 0 chr4 2912835 2913001 -199415346 + AluY SINE Alu 134 299 -12 1828 68 59 94 chr4 2914149 2914283 -199414064 + AluSp SINE Alu 1 138 -175 2089 100 0 3 chr4 2914283 2914573 -199413774 + AluY SINE Alu 1 289 -22 1828 68 59 94 chr4 2914573 2914745 -199413602 + AluSp SINE Alu 138 296 -17 2226 82 0 0 chr4 2915087 2915409 -199412938 - AluSc SINE Alu 0 322 1 30557 110 13 60 chr4 2915448 2917749 -199410598 - L1PA7 LINE L1 0 6154 3746 1926 119 36 23 chr4 2917749 2918052 -199410295 - AluSc SINE Alu 0 309 3 30557 110 13 60 chr4 2918052 2920047 -199408300 - L1PA7 LINE L1 -2408 3746 2276 2288 75 0 3 chr4 2920047 2920342 -199408005 - AluY SINE Alu -17 294 1 30557 110 13 60 chr4 2920342 2922508 -199405839 - L1PA7 LINE L1 -3878 2276 9 283 333 69 7 chr4 2922599 2922743 -199405604 - MIR SINE MIR -2 260 108 225 237 0 0 chr4 2933187 2933246 -199395101 + (CCCCAA)n Simple_repeat Simple_repeat 5 63 0 434 283 5 35 chr4 2933339 2933656 -199394691 + C-rich Low_complexity Low_complexity 1 307 0 343 295 145 21 chr4 2934183 2934424 -199393923 - MLT2F LTR ERVL -89 574 304 277 280 40 0 chr4 2934523 2934598 -199393749 - MLT2F LTR ERVL -532 131 54 3314 143 118 33 chr4 2934749 2935386 -199392961 + LTR8 LTR ERV1 1 691 0 1943 75 101 0 chr4 2937160 2937427 -199390920 + AluSp SINE Alu 1 294 -19 1658 152 11 14 chr4 2937427 2937704 -199390643 - AluJo SINE Alu -21 291 16 228 305 73 24 chr4 2939516 2939598 -199388749 - L2 LINE L2 -49 3264 3179 589 268 91 0 chr4 2942541 2942761 -199385586 - Charlie5 DNA MER1_type -12 2600 2361 2239 98 0 0 chr4 2943323 2943618 -199384729 - AluSp SINE Alu -18 295 1 181 149 43 21 chr4 2945736 2945783 -199382564 - MIR SINE MIR -42 220 173 2209 93 0 0 chr4 2947375 2947666 -199380681 - AluSx SINE Alu -21 291 1 1776 169 3 3 chr4 2948114 2948415 -199379932 - AluJb SINE Alu -11 301 1 209 186 0 0 chr4 2949783 2949826 -199378521 + GA-rich Low_complexity Low_complexity 1 43 0 705 187 0 22 chr4 2950603 2950737 -199377610 + AluJo SINE Alu 11 141 -171 2249 94 7 0 chr4 2950737 2951036 -199377311 + AluSx SINE Alu 1 301 -11 23 33 0 0 chr4 2951334 2951364 -199376983 + AT_rich Low_complexity Low_complexity 1 30 0 2105 101 10 7 chr4 2951571 2951867 -199376480 + AluSx SINE Alu 1 297 -15 1106 181 166 30 chr4 2952865 2953130 -199375217 + AluJo SINE Alu 2 302 0 619 149 44 0 chr4 2953025 2953139 -199375208 + AluJo/FRAM SINE Alu 193 311 -1 205 212 202 30 chr4 2955026 2955125 -199373222 + MIR3 SINE MIR 4 119 -89 2179 98 0 0 chr4 2955750 2956045 -199372302 - AluSg SINE Alu -15 295 1 2402 71 0 3 chr4 2958056 2958366 -199369981 + AluY SINE Alu 1 309 -2 2153 104 0 7 chr4 2958717 2959016 -199369331 - AluSx SINE Alu -14 298 2 291 248 191 0 chr4 2959285 2959390 -199368957 + MIR SINE MIR 136 260 -2 235 166 61 6 chr4 2959396 2959559 -199368788 + (TTA)n Simple_repeat Simple_repeat 3 174 0 488 68 21 88 chr4 2959573 2959765 -199368582 + (TTATA)n Simple_repeat Simple_repeat 1 179 0 383 173 16 54 chr4 2959765 2959950 -199368397 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 181 138 0 0 chr4 2960022 2960051 -199368296 - MIR SINE MIR -121 141 113 346 236 181 31 chr4 2960772 2960899 -199367448 - MIR SINE MIR 0 262 117 292 273 13 0 chr4 2961227 2961304 -199367043 + MIR SINE MIR 56 133 -129 22 35 0 0 chr4 2961330 2961359 -199366988 + AT_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr4 2961920 2961955 -199366392 + GC_rich Low_complexity Low_complexity 1 35 0 26 50 0 0 chr4 2962306 2962346 -199366001 + GC_rich Low_complexity Low_complexity 1 40 0 244 196 0 0 chr4 2962556 2962602 -199365745 + (CGG)n Simple_repeat Simple_repeat 3 48 0 3553 80 120 35 chr4 2963389 2963937 -199364410 + LTR61 LTR ERV1 1 595 0 605 142 31 63 chr4 2964245 2964372 -199363975 + FLAM_A SINE Alu 10 132 -10 2405 50 3 0 chr4 2964807 2965106 -199363241 + AluY SINE Alu 1 300 -11 2129 155 34 8 chr4 2965587 2965941 -199362406 + MLT1A1 LTR MaLR 1 363 -2 2101 110 10 3 chr4 2966075 2966374 -199361973 - AluSx SINE Alu -11 301 1 2138 81 3 24 chr4 2966468 2966766 -199361581 - AluSp SINE Alu -21 292 1 299 191 0 16 chr4 2967096 2967159 -199361188 - LTR67 LTR ERVL -39 518 457 373 364 112 5 chr4 2967215 2967402 -199360945 - L2 LINE L2 0 3313 3107 562 172 0 0 chr4 2967927 2968014 -199360333 - AluS SINE Alu -224 88 2 2379 80 3 3 chr4 2968018 2968352 -199359995 - AluSp SINE Alu 0 334 1 1526 145 16 46 chr4 2968352 2968656 -199359691 - AluJo SINE Alu -17 295 1 2224 88 0 0 chr4 2969053 2969347 -199359000 + AluSc SINE Alu 1 294 -15 2141 84 0 10 chr4 2969349 2969645 -199358702 - AluY SINE Alu -18 293 1 265 232 0 18 chr4 2970107 2970163 -199358184 + L2 LINE L2 3259 3313 0 2133 186 34 36 chr4 2970285 2970753 -199357594 - MLT1C LTR MaLR 0 467 1 1850 158 0 0 chr4 2971419 2971710 -199356637 - AluJb SINE Alu -21 291 1 1225 303 206 7 chr4 2971780 2972625 -199355722 + L2 LINE L2 1894 2906 -408 756 231 84 48 chr4 2972658 2972695 -199355652 + L2 LINE L2 3041 3075 -238 763 167 24 0 chr4 2972695 2972821 -199355526 - FLAM_A SINE Alu -4 129 1 756 231 84 48 chr4 2972821 2973034 -199355313 + L2 LINE L2 3075 3300 -13 192 40 0 0 chr4 2973034 2973059 -199355288 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 218 287 32 43 chr4 2973059 2973153 -199355194 + MIR SINE MIR 13 105 -157 * 370 233 125 33 chr4 2973151 2973271 -199355076 - L2 LINE L2 -1 3271 3141 370 209 97 75 chr4 2973290 2973354 -199354993 - MLT1J2 LTR MaLR -255 195 134 612 150 18 9 chr4 2973354 2973467 -199354880 - L1PB2 LINE L1 -1 6150 6037 370 209 97 75 chr4 2973467 2973536 -199354811 - MLT1J2 LTR MaLR -316 134 59 2260 77 0 0 chr4 2973698 2973984 -199354363 + AluSc SINE Alu 1 286 -23 1399 169 74 19 chr4 2974493 2974852 -199353495 + LTR54 LTR ERV1 1 404 -94 216 158 0 0 chr4 2974852 2974890 -199353457 + CT-rich Low_complexity Low_complexity 1 38 0 1136 171 46 0 chr4 2974899 2975116 -199353231 - AluJo SINE Alu 0 312 86 513 133 20 10 chr4 2975116 2975214 -199353133 + LTR54 LTR ERV1 410 508 -2 2139 116 6 0 chr4 2975303 2975614 -199352733 - AluSp SINE Alu 0 313 1 1055 265 41 32 chr4 2976151 2976563 -199351784 - MLT1J1 LTR MaLR 0 446 68 352 248 9 28 chr4 2976586 2976695 -199351652 - L1 LINE L1 -866 5280 5174 1348 178 15 118 chr4 2977338 2977486 -199350861 + AluJb SINE Alu 1 163 -139 1942 116 0 47 chr4 2977486 2977623 -199350724 + AluSx SINE Alu 1 143 -169 2182 88 17 3 chr4 2977623 2977920 -199350427 + AluY SINE Alu 1 301 -10 1942 116 0 47 chr4 2977920 2978102 -199350245 + AluSx SINE Alu 143 305 -7 2216 64 4 4 chr4 2978106 2978387 -199349960 + AluSp SINE Alu 1 281 -32 1348 178 15 118 chr4 2978387 2978564 -199349783 + AluJb SINE Alu 166 297 -5 221 329 12 0 chr4 2978789 2978874 -199349473 + L2 LINE L2 3185 3270 -2 188 250 132 13 chr4 2979110 2979186 -199349161 - MIR SINE MIR -17 245 161 8605 151 68 19 chr4 2979418 2980971 -199347376 - MER52A LTR ERV1 0 1755 50 227 333 16 0 chr4 2981542 2981605 -199346742 + L2 LINE L2 3209 3272 0 231 281 112 0 chr4 2981606 2981695 -199346652 - L2 LINE L2 -901 2413 2315 768 246 111 63 chr4 2982182 2982402 -199345945 + L2 LINE L2 2960 3203 -110 1958 121 48 58 chr4 2982402 2982781 -199345566 - THE1C LTR MaLR 0 375 1 768 246 111 63 chr4 2982781 2982894 -199345453 + L2 LINE L2 3203 3309 -4 856 151 0 0 chr4 2983494 2983620 -199344727 - FLAM_C SINE Alu -14 129 4 1994 80 42 7 chr4 2983807 2984095 -199344252 + AluY SINE Alu 1 298 -13 696 200 8 0 chr4 2984102 2984227 -199344120 + FLAM_A SINE Alu 1 126 -7 344 353 87 12 chr4 2984247 2984394 -199343953 + L1MC4a LINE L1 5722 5885 -1923 2101 79 48 3 chr4 2984394 2984685 -199343662 + AluY SINE Alu 1 304 -7 344 353 87 12 chr4 2984685 2984710 -199343637 + L1MC4a LINE L1 5885 5907 -1901 421 336 118 0 chr4 2984727 2984956 -199343391 - L1MC/D LINE L1 -2167 5641 5386 2245 80 3 3 chr4 2985032 2985332 -199343015 - AluSc SINE Alu -9 300 1 2356 148 69 29 chr4 2985615 2986095 -199342252 - L1MB8 LINE L1 -1 6177 5679 263 141 188 0 chr4 2986099 2986163 -199342184 - L1MB3 LINE L1 -7 6176 6101 881 189 12 0 chr4 2986168 2986337 -199342010 - L1M3 LINE L1 -388 5795 5625 983 97 8 0 chr4 2986337 2986471 -199341876 + AluSq/x SINE Alu 1 135 -178 2034 146 0 0 chr4 2986472 2986780 -199341567 + AluSx SINE Alu 1 308 -4 1569 163 62 14 chr4 2986783 2987150 -199341197 - L1M3 LINE L1 -550 5624 5241 582 118 20 29 chr4 2987150 2987274 -199341073 + AluSg/x SINE Alu 183 305 0 2092 76 14 7 chr4 2987581 2987872 -199340475 + AluSc SINE Alu 1 293 -16 898 131 0 115 chr4 2988087 2988278 -199340069 - AluSg/x SINE Alu -8 304 136 23 68 0 0 chr4 2988764 2988808 -199339539 + AT_rich Low_complexity Low_complexity 1 44 0 2281 105 0 0 chr4 2988922 2989235 -199339112 - AluSq SINE Alu 0 313 1 189 287 96 32 chr4 2989608 2989702 -199338645 + L2 LINE L2 3155 3254 -18 1629 193 15 46 chr4 2989715 2990108 -199338239 - MLT2C1 LTR ERVL 0 397 17 1979 130 0 3 chr4 2990190 2990490 -199337857 - AluSx SINE Alu -13 299 1 900 149 0 8 chr4 2990722 2990856 -199337491 - FLAM_A SINE Alu 0 133 1 1684 155 10 17 chr4 2991076 2991373 -199336974 + AluJo SINE Alu 1 295 -17 1583 197 0 10 chr4 2991377 2991666 -199336681 + AluJb SINE Alu 1 286 -26 2054 132 3 0 chr4 2992070 2992381 -199335966 + AluSx SINE Alu 1 312 0 699 215 17 29 chr4 2992381 2992542 -199335805 - MIR SINE MIR -50 212 52 1901 161 0 0 chr4 2992879 2993189 -199335158 - AluSx SINE Alu -2 310 1 483 142 14 177 chr4 2993395 2993457 -199334890 - MSTD LTR MaLR 0 396 368 3497 94 2 0 chr4 2993457 2993933 -199334414 - L1PA13 LINE L1 -3 6160 5684 483 142 14 177 chr4 2993933 2994009 -199334338 - MSTD LTR MaLR -28 368 281 979 249 50 80 chr4 2994009 2994065 -199334282 - LTR56 LTR ERV1 0 437 381 1912 120 17 40 chr4 2994065 2994366 -199333981 + AluSx SINE Alu 1 294 -18 979 249 50 80 chr4 2994366 2994757 -199333590 - LTR56 LTR ERV1 -56 381 9 600 200 140 93 chr4 2994774 2994951 -199333396 - MSTD LTR MaLR -114 282 91 2140 105 0 0 chr4 2994951 2995247 -199333100 + AluSx SINE Alu 1 296 -16 600 200 140 93 chr4 2995247 2995343 -199333004 - MSTD LTR MaLR -305 91 1 523 141 0 0 chr4 2995617 2995695 -199332652 + AluJ/FLAM SINE Alu 2 79 -233 707 225 16 16 chr4 2995889 2996076 -199332271 + L1 LINE L1 3773 3959 -2187 315 232 192 40 chr4 2996080 2996205 -199332142 - MSTC LTR MaLR -284 144 1 5442 186 24 60 chr4 2996240 2996306 -199332041 + L1ME LINE L1 3988 4055 -2135 2116 128 0 0 chr4 2996306 2996610 -199331737 + AluSg SINE Alu 1 304 -6 5442 186 24 60 chr4 2996610 2996756 -199331591 + L1ME LINE L1 4055 4205 -1985 2015 117 7 3 chr4 2996756 2997055 -199331292 + AluSx SINE Alu 3 302 -10 5442 186 24 60 chr4 2997055 2997746 -199330601 + L1ME LINE L1 4205 4825 -1365 1704 190 20 42 chr4 2997746 2998151 -199330196 - MSTD LTR MaLR 0 396 1 5442 186 24 60 chr4 2998151 2998669 -199329678 + L1ME LINE L1 4825 5360 -830 21 36 0 0 chr4 2998963 2998991 -199329356 + AT_rich Low_complexity Low_complexity 1 28 0 181 273 23 0 chr4 2999131 2999175 -199329172 + L2 LINE L2 3223 3267 -46 2228 96 6 16 chr4 2999234 2999546 -199328801 - AluSc SINE Alu 0 309 1 380 264 6 10 chr4 2999785 2999881 -199328466 + L1MC4 LINE L1 1995 6983 -1339 248 221 47 0 chr4 2999891 2999977 -199328370 + L1MC4 LINE L1 6614 6703 -1339 273 57 0 0 chr4 2999999 3000034 -199328313 + (CA)n Simple_repeat Simple_repeat 2 36 0 2178 88 3 3 chr4 3000048 3000345 -199328002 - AluSq SINE Alu -16 297 1 438 277 43 14 chr4 3000697 3000838 -199327509 + L1ME LINE L1 5517 5661 -460 976 195 0 61 chr4 3001000 3001231 -199327116 + AluJb SINE Alu 1 217 -95 * 1030 127 6 0 chr4 3001230 3001388 -199326959 + AluSg/x SINE Alu 131 289 -23 610 167 0 0 chr4 3001389 3001491 -199326856 + AluJb SINE Alu 135 236 -76 2679 147 39 30 chr4 3001590 3001870 -199326477 - L1MB2 LINE L1 -3 6168 5879 2007 121 3 3 chr4 3001870 3002168 -199326179 - AluSx SINE Alu -14 298 1 2679 147 39 30 chr4 3002168 3002396 -199325951 - L1MB2 LINE L1 -292 5879 5655 192 40 0 0 chr4 3002408 3002433 -199325914 + (GTTTG)n Simple_repeat Simple_repeat 5 29 0 1872 76 76 8 chr4 3002433 3002697 -199325650 - AluSq SINE Alu -31 282 1 2651 125 13 47 chr4 3003114 3003562 -199324785 - Tigger2a DNA MER2_type -1 433 1 193 286 98 18 chr4 3003977 3004089 -199324258 - L2 LINE L2 -579 2735 2615 1959 114 13 24 chr4 3004199 3004517 -199323830 + AluSx SINE Alu 1 312 0 201 287 96 11 chr4 3004651 3004745 -199323602 + MIR3 SINE MIR 60 161 -47 2357 91 3 3 chr4 3004776 3005074 -199323273 + AluSp SINE Alu 1 298 -15 1823 153 50 0 chr4 3005176 3005458 -199322889 + AluJb SINE Alu 1 296 -16 1026 196 0 21 chr4 3005714 3005908 -199322439 + AluJo SINE Alu 121 310 -2 647 240 112 11 chr4 3005924 3006103 -199322244 - MIR SINE MIR -63 199 3 1096 170 0 0 chr4 3006544 3006715 -199321632 + FAM SINE Alu 1 44 -5 577 316 14 28 chr4 3006984 3007199 -199321148 + MIR SINE MIR 47 258 -4 2196 98 7 3 chr4 3007200 3007497 -199320850 + AluSx SINE Alu 1 298 -14 2347 90 7 3 chr4 3007821 3008121 -199320226 + AluSg SINE Alu 1 301 -9 2339 82 0 0 chr4 3008887 3009205 -199319142 - AluSp SINE Alu 0 318 1 206 304 48 56 chr4 3009637 3009762 -199318585 - L3 LINE CR1 -28 1549 1426 862 128 0 0 chr4 3009978 3010095 -199318252 + FLAM_C SINE Alu 2 118 -15 28 29 0 0 chr4 3010095 3010130 -199318217 + AT_rich Low_complexity Low_complexity 1 35 0 257 274 174 26 chr4 3010589 3010779 -199317568 + MIR SINE MIR 12 229 -33 251 172 198 43 chr4 3011100 3011216 -199317131 + L1ME4a LINE L1 5982 6115 -6 320 272 44 33 chr4 3011222 3011402 -199316945 + L1MC5 LINE L1 7732 7913 -48 2262 95 0 14 chr4 3011537 3011831 -199316516 + AluSx SINE Alu 1 290 -22 847 147 0 0 chr4 3011836 3011952 -199316395 - FLAM_C SINE Alu -16 117 2 2089 82 36 52 chr4 3012430 3012735 -199315612 + AluSg SINE Alu 1 300 -10 1131 166 6 0 chr4 3012735 3012910 -199315437 + AluJb SINE Alu 134 309 -3 351 322 136 12 chr4 3013166 3013408 -199314939 + L2 LINE L2 2561 2832 -482 23 0 0 0 chr4 3013664 3013687 -199314660 + AT_rich Low_complexity Low_complexity 1 23 0 1492 242 98 68 chr4 3013841 3014258 -199314089 + L1MC4a LINE L1 3782 4185 -1961 853 132 0 29 chr4 3014258 3014394 -199313953 - FLAM_C SINE Alu -1 132 1 1492 242 98 68 chr4 3014394 3014572 -199313775 + L1MC4a LINE L1 4185 4356 -1790 815 160 0 0 chr4 3014572 3014697 -199313650 + FLAM_A SINE Alu 2 126 -7 1492 242 98 68 chr4 3014697 3014779 -199313568 + L1MC4a LINE L1 4356 4434 -1712 2341 100 0 3 chr4 3014779 3015080 -199313267 + AluSx SINE Alu 1 300 -12 1492 242 98 68 chr4 3015080 3015203 -199313144 + L1MC4a LINE L1 4434 4608 -1538 204 40 0 0 chr4 3015208 3015233 -199313114 + (TG)n Simple_repeat Simple_repeat 1 25 0 731 261 51 4 chr4 3015237 3015471 -199312876 + L1MC4a LINE L1 5301 5545 -617 2010 108 52 7 chr4 3016202 3016489 -199311858 - AluSx SINE Alu -12 300 1 352 239 14 0 chr4 3016886 3016957 -199311390 - MER2 DNA MER2_type -1 344 273 1314 147 20 12 chr4 3016992 3017244 -199311103 - MER2 DNA MER2_type -57 288 35 234 294 165 9 chr4 3018040 3018149 -199310198 + L2 LINE L2 3145 3270 -2 368 188 0 0 chr4 3018160 3018224 -199310123 - FLAM_A SINE Alu -68 64 1 1766 170 3 10 chr4 3018879 3019168 -199309179 - AluJo SINE Alu -21 291 5 334 243 37 19 chr4 3019963 3020070 -199308277 + L1MC4a LINE L1 5830 5938 -1870 391 391 41 10 chr4 3020175 3020372 -199307975 - L1MEc LINE L1 -5995 401 199 976 214 25 79 chr4 3020428 3020746 -199307601 - AluJo SINE Alu 0 302 2 2255 106 10 0 chr4 3020764 3021079 -199307268 + AluSx SINE Alu 1 318 0 533 285 189 48 chr4 3021083 3021174 -199307173 - L1MC4a LINE L1 -1436 6372 6295 2364 120 0 0 chr4 3021174 3021475 -199306872 + AluSx SINE Alu 1 301 -11 533 285 189 48 chr4 3021475 3021573 -199306774 - L1MC4a LINE L1 -1513 6295 6212 2604 36 3 10 chr4 3021573 3021876 -199306471 - AluY SINE Alu -10 301 1 533 285 189 48 chr4 3021876 3022166 -199306181 - L1MC4a LINE L1 -1596 6212 5824 1078 223 92 4 chr4 3022259 3022532 -199305815 - L1MC4a LINE L1 -2101 5707 5411 1003 105 0 0 chr4 3022633 3022766 -199305581 + FLAM_C SINE Alu 1 133 0 297 232 43 0 chr4 3022828 3022897 -199305450 - MIR SINE MIR -183 79 8 402 283 9 44 chr4 3023073 3023186 -199305161 - L2 LINE L2 0 3272 3164 1699 172 37 24 chr4 3023235 3023532 -199304815 - AluJb SINE Alu -11 301 1 376 281 70 12 chr4 3024331 3024502 -199303845 - MIR3 SINE MIR -19 189 9 698 177 0 0 chr4 3024831 3024961 -199303386 - L1MB7 LINE L1 -1 6183 6054 2226 125 0 0 chr4 3024961 3025258 -199303089 - AluSx SINE Alu -15 297 1 253 191 0 0 chr4 3025258 3025300 -199303047 - L1MB7 LINE L1 -293 5875 5834 528 173 29 29 chr4 3026618 3026722 -199301625 - L2 LINE L2 0 3313 3210 348 257 119 95 chr4 3026880 3027250 -199301097 - L2 LINE L2 -414 2900 2522 722 284 222 16 chr4 3027280 3028037 -199300310 - L2 LINE L2 -1683 1631 719 1314 106 22 0 chr4 3028388 3028568 -199299779 + AluSq SINE Alu 1 184 -129 471 76 0 0 chr4 3028569 3028635 -199299712 + AluSc SINE Alu 238 303 -6 471 236 19 0 chr4 3028857 3028963 -199299384 + MIR SINE MIR 107 214 -48 1491 185 18 78 chr4 3029127 3029289 -199299058 - MLT1A1 LTR MaLR 0 365 195 775 174 0 36 chr4 3029289 3029427 -199298920 + FLAM_C SINE Alu 1 133 0 1491 185 18 78 chr4 3029427 3029648 -199298699 - MLT1A1 LTR MaLR -170 195 5 2146 114 3 25 chr4 3029757 3030073 -199298274 - AluSc SINE Alu 0 309 1 266 241 167 19 chr4 3030116 3030224 -199298123 - L2 LINE L2 -7 3265 3142 377 202 131 20 chr4 3030512 3030611 -199297736 - MER58B DNA MER1_type 0 341 232 2336 65 41 0 chr4 3031164 3031454 -199296893 + AluY SINE Alu 1 302 -9 779 122 7 58 chr4 3031771 3031910 -199296437 - FLAM_C SINE Alu 0 133 2 971 190 28 6 chr4 3032130 3032309 -199296038 - AluJo SINE Alu -129 183 1 525 32 0 0 chr4 3033233 3033296 -199295051 + (TG)n Simple_repeat Simple_repeat 1 63 0 276 53 0 0 chr4 3033763 3033801 -199294546 + (TG)n Simple_repeat Simple_repeat 2 39 0 2374 90 0 10 chr4 3033827 3034128 -199294219 + AluSg SINE Alu 1 298 -12 2377 100 0 0 chr4 3035128 3035429 -199292918 + AluSx SINE Alu 1 301 -11 2446 109 0 0 chr4 3035610 3035923 -199292424 + AluSq SINE Alu 1 313 0 2110 123 0 0 chr4 3036355 3036666 -199291681 + AluSx SINE Alu 1 311 0 285 343 66 15 chr4 3038647 3038784 -199289563 + MIR SINE MIR 108 251 -11 4312 117 11 17 chr4 3039066 3039252 -199289095 + MER41B LTR ERV1 1 187 -448 1819 127 92 0 chr4 3039252 3039536 -199288811 + AluSx SINE Alu 1 310 -2 4312 117 11 17 chr4 3039536 3039988 -199288359 + MER41B LTR ERV1 187 635 0 735 108 0 0 chr4 3040328 3040430 -199287917 + U6 snRNA snRNA 1 102 -5 1808 119 79 0 chr4 3040577 3040854 -199287493 - AluSx SINE Alu -13 299 1 3951 159 99 38 chr4 3040888 3041699 -199286648 + MER21B LTR ERV1 3 862 -1 1867 224 54 17 chr4 3041709 3042227 -199286120 - MER72 LTR ERV1 -174 548 12 2900 118 18 18 chr4 3042341 3042775 -199285572 - MER57B LTR ERV1 0 434 1 1207 72 63 31 chr4 3042775 3042987 -199285360 - MER57B-int LTR ERV1 0 7537 7279 748 86 23 31 chr4 3042987 3043115 -199285232 - LTR54B LTR ERV1 -367 131 5 14282 96 72 48 chr4 3043115 3043156 -199285191 - MER57B-int LTR ERV1 -387 7150 7111 6322 113 17 42 chr4 3043156 3043257 -199285090 + LTR13 LTR ERVK 1 103 -851 2515 46 0 0 chr4 3043257 3043576 -199284771 + AluY SINE Alu 1 319 0 6322 113 17 42 chr4 3043576 3044451 -199283896 + LTR13 LTR ERVK 103 954 0 14282 96 72 48 chr4 3044451 3045369 -199282978 - MER57B-int LTR ERV1 -426 7111 6216 2257 120 0 0 chr4 3045369 3045669 -199282678 + AluSx SINE Alu 1 300 -12 14282 96 72 48 chr4 3045669 3046134 -199282213 - MER57B-int LTR ERV1 -1321 6216 5763 381 43 0 0 chr4 3046134 3046181 -199282166 + (CA)n Simple_repeat Simple_repeat 1 47 0 646 103 0 0 chr4 3046181 3046268 -199282079 - AluSg/x SINE Alu -18 294 208 14282 96 72 48 chr4 3046268 3047201 -199281146 - MER57B-int LTR ERV1 -1773 5764 4646 407 91 0 30 chr4 3047201 3047260 -199281087 - MER57B-int LTR ERV1 -3194 4343 4284 441 0 0 0 chr4 3047260 3047309 -199281038 + (TG)n Simple_repeat Simple_repeat 2 50 0 2216 99 7 0 chr4 3047309 3047592 -199280755 - AluSp SINE Alu -28 285 1 5103 121 61 32 chr4 3047607 3048476 -199279871 + MER57-int LTR ERV1 1478 2371 -5166 839 160 27 0 chr4 3048475 3048625 -199279722 + MER57-int LTR ERV1 2476 2629 -4908 * 1672 82 55 8 chr4 3048621 3048878 -199279469 + MER57-int LTR ERV1 2781 3049 -4488 3512 92 31 81 chr4 3048883 3048933 -199279414 + MER57-int LTR ERV1 3248 3299 -4517 2171 107 3 23 chr4 3048933 3049233 -199279114 + AluSx SINE Alu 1 294 -18 3512 92 31 81 chr4 3049233 3049478 -199278869 + MER57-int LTR ERV1 3299 3555 -4261 2231 135 0 0 chr4 3049478 3049789 -199278558 + AluSx SINE Alu 2 312 0 3512 92 31 81 chr4 3049789 3049981 -199278366 + MER57-int LTR ERV1 3555 3755 -4061 2335 96 7 3 chr4 3049981 3050284 -199278063 - AluSq SINE Alu -9 304 1 3512 92 31 81 chr4 3050284 3050603 -199277744 + MER57-int LTR ERV1 3755 4143 -3673 2471 68 21 21 chr4 3050601 3050931 -199277416 + MER57-int LTR ERV1 3914 4246 -3291 * 2348 110 0 0 chr4 3050931 3051239 -199277108 - AluSg SINE Alu -2 308 1 2471 68 21 21 chr4 3051239 3051293 -199277054 + MER57-int LTR ERV1 4245 4298 -3239 1463 107 202 4 chr4 3051293 3051536 -199276811 + AluSg1 SINE Alu 1 291 -18 280 98 0 0 chr4 3051538 3051579 -199276768 - MER57B-int LTR ERV1 -6151 1386 1346 * 1299 86 0 0 chr4 3051573 3051748 -199276599 - MER57B-int LTR ERV1 -6570 967 793 * 4521 98 24 3 chr4 3051746 3052407 -199275940 - MER57B-int LTR ERV1 -6860 677 3 2718 113 61 0 chr4 3052408 3052816 -199275531 - MER57B LTR ERV1 -1 433 1 1420 153 92 98 chr4 3052969 3053256 -199275091 - L1MB3 LINE L1 0 6183 5897 2473 73 0 0 chr4 3053256 3053556 -199274791 - AluY SINE Alu -7 304 5 1420 153 92 98 chr4 3053556 3053668 -199274679 - L1MB3 LINE L1 -286 5897 5786 4293 107 5 45 chr4 3053668 3053851 -199274496 - MER41B LTR ERV1 0 635 446 2314 74 40 0 chr4 3053851 3054150 -199274197 - AluY SINE Alu 0 311 1 4293 107 5 45 chr4 3054150 3054272 -199274075 - MER41B LTR ERV1 -189 446 321 2303 80 3 0 chr4 3054272 3054571 -199273776 + AluSp SINE Alu 1 300 -13 4293 107 5 45 chr4 3054571 3054923 -199273424 - MER41B LTR ERV1 -314 321 1 1809 171 0 0 chr4 3054944 3055248 -199273099 - AluSx SINE Alu -8 304 1 1758 221 53 22 chr4 3055265 3055677 -199272670 + MER57B LTR ERV1 1 425 -9 262 200 36 0 chr4 3055682 3055737 -199272610 - L1MB3 LINE L1 -641 5542 5486 * 280 232 70 35 chr4 3055715 3055818 -199272529 - L1ME LINE L1 -286 5835 5724 1968 92 67 7 chr4 3055818 3056101 -199272246 - AluSx SINE Alu -12 300 1 280 232 70 35 chr4 3056101 3056139 -199272208 - L1ME LINE L1 -397 5724 5689 883 107 0 29 chr4 3056146 3056286 -199272061 - AluSg/x SINE Alu -10 302 167 232 331 89 8 chr4 3056375 3056499 -199271848 - L1ME LINE L1 -519 5602 5469 501 216 82 0 chr4 3056562 3056659 -199271688 - AluJo SINE Alu -24 288 184 419 147 13 27 chr4 3056662 3056737 -199271610 - MER4A LTR ERV1 -4 660 587 2864 182 16 56 chr4 3056737 3057358 -199270989 + LTR9 LTR ERV1 1 596 -16 1430 135 149 34 chr4 3057381 3057629 -199270718 - MER4A LTR ERV1 -74 590 372 2276 83 0 3 chr4 3057629 3057931 -199270416 + AluSq SINE Alu 1 301 -12 2249 86 0 13 chr4 3057931 3058246 -199270101 + AluY SINE Alu 1 311 0 1430 135 149 34 chr4 3058246 3058292 -199270055 - MER4A LTR ERV1 -291 373 261 1101 173 5 37 chr4 3058348 3058562 -199269785 - AluJo SINE Alu -105 207 1 615 179 0 34 chr4 3059946 3060063 -199268284 - FLAM_C SINE Alu -24 119 7 634 228 152 0 chr4 3060122 3060280 -199268067 + MER21B LTR ERV1 5 186 -677 2171 120 0 0 chr4 3060329 3060628 -199267719 - AluSg SINE Alu -11 299 1 780 272 86 30 chr4 3060735 3061326 -199267021 + L1M4 LINE L1 3321 3944 -2202 1720 90 98 22 chr4 3061469 3061746 -199266601 - AluSg SINE Alu -7 303 6 2022 196 56 0 chr4 3061779 3062172 -199266175 - MER47B DNA MER2_type -2 416 2 2132 92 0 0 chr4 3062414 3062698 -199265649 - AluSc SINE Alu -21 288 5 507 282 89 81 chr4 3062948 3063641 -199264706 + L1MEd LINE L1 580 1255 -4864 720 308 36 17 chr4 3064103 3064258 -199264089 + L1MEd LINE L1 1311 1462 -4848 2531 55 0 3 chr4 3064258 3064568 -199263779 + AluY SINE Alu 1 309 -2 720 308 36 17 chr4 3064568 3064825 -199263522 + L1MEd LINE L1 1462 1731 -4579 1956 146 0 0 chr4 3064888 3065189 -199263158 - AluSx SINE Alu -11 301 1 344 349 31 52 chr4 3065202 3065385 -199262962 + L1MEd LINE L1 1822 2001 -4309 1885 128 0 33 chr4 3065385 3065691 -199262656 - AluSx SINE Alu -16 296 1 344 349 31 52 chr4 3065691 3065736 -199262611 + L1MEd LINE L1 2001 2045 -4265 366 245 39 10 chr4 3066391 3066493 -199261854 - L1ME4a LINE L1 -19 6102 5998 2193 83 3 0 chr4 3066530 3066820 -199261527 - AluSx SINE Alu -16 296 6 1040 258 124 34 chr4 3067396 3067838 -199260509 - MLT1J LTR MaLR -13 498 17 2126 156 48 0 chr4 3067849 3068221 -199260126 + MLT1B LTR MaLR 1 390 0 1470 236 121 23 chr4 3068317 3068788 -199259559 - MLT1E LTR MaLR -69 524 8 2139 98 10 3 chr4 3068862 3069158 -199259189 - AluSx SINE Alu -9 303 6 770 144 24 8 chr4 3069172 3069297 -199259050 - FRAM SINE Alu -22 154 28 194 209 0 31 chr4 3070294 3070423 -199257924 + (CCCCG)n Simple_repeat Simple_repeat 5 129 0 197 62 0 31 chr4 3070458 3070490 -199257857 + (CCCCG)n Simple_repeat Simple_repeat 4 34 0 377 275 0 53 chr4 3070501 3070690 -199257657 + (CCCCG)n Simple_repeat Simple_repeat 1 179 0 28 61 0 0 chr4 3070839 3070888 -199257459 + GC_rich Low_complexity Low_complexity 1 49 0 528 16 0 0 chr4 3071112 3071173 -199257174 + (CAG)n Simple_repeat Simple_repeat 1 61 0 261 198 0 0 chr4 3071173 3071254 -199257093 + (CCG)n Simple_repeat Simple_repeat 3 83 0 183 100 0 0 chr4 3071256 3071286 -199257061 + (CCCCCG)n Simple_repeat Simple_repeat 4 33 0 233 224 13 66 chr4 3072912 3072988 -199255359 + Tigger2 DNA MER2_type 2414 2485 -233 2094 109 0 0 chr4 3073133 3073418 -199254929 + AluSx SINE Alu 6 290 -22 2071 119 0 0 chr4 3073664 3073950 -199254397 - AluSg SINE Alu -24 286 1 21 57 0 0 chr4 3074003 3074038 -199254309 + AT_rich Low_complexity Low_complexity 1 35 0 737 233 93 23 chr4 3074457 3074672 -199253675 - L2 LINE L2 0 3313 3084 23 0 0 0 chr4 3074688 3074711 -199253636 + AT_rich Low_complexity Low_complexity 1 23 0 416 98 16 0 chr4 3074714 3074775 -199253572 - U7 snRNA snRNA 0 63 2 224 59 29 0 chr4 3074787 3074821 -199253526 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1616 154 0 45 chr4 3074828 3074968 -199253379 - AluSx SINE Alu -39 273 151 2238 67 0 54 chr4 3074968 3075283 -199253064 - AluY SINE Alu -13 298 1 1616 154 0 45 chr4 3075283 3075428 -199252919 - AluSx SINE Alu -161 151 1 202 191 24 0 chr4 3075433 3075475 -199252872 - L2 LINE L2 -239 3074 3032 840 179 6 23 chr4 3075480 3075653 -199252694 - FRAM SINE Alu -6 170 1 1039 266 79 40 chr4 3075654 3076156 -199252191 - L2 LINE L2 -277 3036 2503 2138 126 0 0 chr4 3076326 3076627 -199251720 - AluSq SINE Alu -12 301 1 3797 184 37 1 chr4 3076658 3077451 -199250896 - L1M4 LINE L1 -809 5337 4517 1300 183 70 4 chr4 3077451 3077724 -199250623 - MER58B DNA MER1_type -8 333 43 2325 74 6 3 chr4 3077779 3078090 -199250257 - AluSp SINE Alu -1 312 1 367 296 127 55 chr4 3078144 3078397 -199249950 - L1ME4a LINE L1 -11 6110 5840 278 304 236 20 chr4 3078750 3078898 -199249449 + MER5A DNA MER1_type 10 189 0 473 267 182 15 chr4 3079143 3079420 -199248927 - L2 LINE L2 -209 3104 2784 1409 170 24 35 chr4 3079471 3079760 -199248587 + AluJo SINE Alu 1 286 -26 459 0 0 0 chr4 3079763 3079814 -199248533 + (CA)n Simple_repeat Simple_repeat 2 52 0 2624 149 99 62 chr4 3079854 3080418 -199247929 + L1MD2 LINE L1 5484 6068 -291 817 147 0 0 chr4 3080419 3080555 -199247792 - AluSg/x SINE Alu -1 311 176 2079 122 0 3 chr4 3080632 3080928 -199247419 + AluSx SINE Alu 1 295 -17 2281 88 0 3 chr4 3080957 3081263 -199247084 + AluY SINE Alu 1 305 -6 1948 104 24 0 chr4 3081370 3081658 -199246689 - AluSx SINE Alu -17 295 1 424 294 28 28 chr4 3082317 3082494 -199245853 - MER104 DNA Tc2 -3 177 1 349 290 65 0 chr4 3082500 3082607 -199245740 + MIR SINE MIR 32 145 -117 1506 202 10 10 chr4 3082614 3082921 -199245426 + AluJo SINE Alu 1 307 -5 180 381 48 0 chr4 3083013 3083097 -199245250 + L2 LINE L2 3185 3272 0 2059 94 49 0 chr4 3084072 3084360 -199243987 - AluSp SINE Alu -9 304 3 2144 83 41 0 chr4 3084409 3084699 -199243648 - AluY SINE Alu -9 302 1 978 204 102 32 chr4 3084707 3084991 -199243356 - L1MB3 LINE L1 -1 6182 5879 351 288 141 18 chr4 3085245 3085408 -199242939 + MIR SINE MIR 51 233 -29 2367 68 0 0 chr4 3085485 3085778 -199242569 - AluY SINE Alu -18 293 1 232 298 0 18 chr4 3086498 3086555 -199241792 - MER5A DNA MER1_type -3 186 131 435 286 52 75 chr4 3086839 3087052 -199241295 + L1ME LINE L1 4474 4681 -1465 2043 148 0 0 chr4 3087055 3087366 -199240981 + AluSq SINE Alu 1 311 -2 586 205 8 33 chr4 3087829 3087951 -199240396 + MLT1A2 LTR MaLR 256 374 0 296 274 69 10 chr4 3088046 3088148 -199240199 + L1ME LINE L1 5552 5659 -462 1933 108 7 7 chr4 3088259 3088545 -199239802 - AluSg SINE Alu -24 286 1 1580 174 17 7 chr4 3088619 3088907 -199239440 - AluJo SINE Alu -21 291 1 2172 251 68 22 chr4 3088945 3089591 -199238756 + L1MEc LINE L1 1 676 -5720 305 248 74 33 chr4 3089585 3089706 -199238641 + L1MEc LINE L1 1847 1972 -4424 * 1200 204 59 64 chr4 3089706 3090094 -199238253 + MLT1D LTR MaLR 1 386 -119 8494 59 7 172 chr4 3090138 3091766 -199236581 - SVA Other Other 0 1386 28 566 156 15 82 chr4 3091769 3091904 -199236443 + MLT1D LTR MaLR 377 502 -3 420 242 129 16 chr4 3091904 3092090 -199236257 + L1MEc LINE L1 1985 2191 -4205 3901 247 58 31 chr4 3092099 3093062 -199235285 + L1MEc LINE L1 2179 3115 -3100 1612 198 0 0 chr4 3093062 3093355 -199234992 + AluJo SINE Alu 1 293 -19 3901 247 58 31 chr4 3093355 3093578 -199234769 + L1MEc LINE L1 3115 3331 -2884 2197 113 0 0 chr4 3093578 3093879 -199234468 + AluSx SINE Alu 4 304 -8 3901 247 58 31 chr4 3093879 3094045 -199234302 + L1MEc LINE L1 3331 3568 -2647 1001 159 246 10 chr4 3094050 3094359 -199233988 + Charlie5 DNA MER1_type 2243 2624 0 1425 158 54 28 chr4 3095180 3095497 -199232850 - L1MC3 LINE L1 0 7785 7461 183 289 0 0 chr4 3096371 3096416 -199231931 + MIR SINE MIR 106 150 -112 1825 131 3 3 chr4 3096971 3097254 -199231093 - AluJb SINE Alu -29 283 1 21 0 0 0 chr4 3099413 3099434 -199228913 + AT_rich Low_complexity Low_complexity 1 21 0 2429 62 0 3 chr4 3099447 3099751 -199228596 - AluSp SINE Alu -10 303 1 28 29 0 0 chr4 3100125 3100160 -199228187 + AT_rich Low_complexity Low_complexity 1 35 0 1060 117 12 0 chr4 3100170 3100332 -199228015 - L1MA2 LINE L1 -7 6297 6134 630 137 21 0 chr4 3100333 3100428 -199227919 - AluSg/x SINE Alu -20 289 193 730 45 0 0 chr4 3100434 3100523 -199227824 - AluS SINE Alu -223 90 2 2161 101 7 0 chr4 3100557 3100855 -199227492 + AluSx SINE Alu 5 304 -8 1538 190 37 0 chr4 3100858 3101158 -199227189 + AluJb SINE Alu 1 311 -1 257 191 0 0 chr4 3101176 3101223 -199227124 - L1MA2 LINE L1 -188 6116 6070 536 262 126 78 chr4 3101714 3102008 -199226339 + L2 LINE L2 3005 3312 -1 1560 161 57 0 chr4 3102314 3102593 -199225754 + AluJb SINE Alu 1 295 -17 261 328 41 25 chr4 3102716 3102838 -199225509 + L2 LINE L2 2671 2794 -520 201 341 78 23 chr4 3102845 3102974 -199225373 + L2 LINE L2 2926 3061 -252 260 327 103 33 chr4 3104234 3104448 -199223899 + MIR SINE MIR 34 262 0 386 198 83 87 chr4 3104976 3104989 -199223358 - HAL1 LINE L1 -4 2503 2491 1607 188 0 33 chr4 3104989 3105293 -199223054 + AluJo SINE Alu 1 294 -18 386 198 83 87 chr4 3105293 3105440 -199222907 - HAL1 LINE L1 -16 2491 2341 2264 91 7 0 chr4 3105440 3105749 -199222598 - AluSp SINE Alu 0 312 2 386 198 83 87 chr4 3105749 3105828 -199222519 - HAL1 LINE L1 -166 2341 2263 934 274 151 47 chr4 3106388 3106984 -199221363 - HAL1 LINE L1 -408 2099 1442 583 228 56 28 chr4 3107003 3107183 -199221164 - HAL1 LINE L1 -1145 1362 1178 969 191 12 0 chr4 3107241 3107409 -199220938 - AluJo/FRAM SINE Alu -8 304 135 2214 114 0 0 chr4 3107409 3107706 -199220641 - AluSx SINE Alu -2 310 14 517 276 98 91 chr4 3107722 3108428 -199219919 - HAL1 LINE L1 -1796 711 1 2001 257 70 20 chr4 3108507 3109211 -199219136 - L1ME3A LINE L1 -16 6154 5416 2236 128 0 0 chr4 3109557 3109855 -199218492 - AluSx SINE Alu -14 298 1 3763 109 0 4 chr4 3110118 3110631 -199217716 - MER9 LTR ERVK 0 511 1 394 294 9 0 chr4 3112770 3112879 -199215468 - L2 LINE L2 -1 3271 3162 306 206 41 0 chr4 3113194 3113267 -199215080 + Charlie7 DNA MER1_type 379 454 -2158 184 216 0 0 chr4 3113283 3113320 -199215027 + MIR SINE MIR 201 237 -25 828 224 114 93 chr4 3113615 3113781 -199214566 - L1MC5 LINE L1 -121 7840 7679 1696 190 17 0 chr4 3113781 3114070 -199214277 + AluJb SINE Alu 1 294 -18 828 224 114 93 chr4 3114070 3114462 -199213885 - L1MC5 LINE L1 -282 7679 7270 314 311 57 0 chr4 3115187 3115293 -199213054 + HAL1 LINE L1 1582 1693 -814 237 286 65 32 chr4 3115886 3116040 -199212307 + HAL1b LINE L1 753 911 -437 917 240 45 0 chr4 3116089 3116289 -199212058 - MER58A DNA MER1_type -11 213 5 848 180 51 0 chr4 3116410 3116588 -199211759 + MER53 DNA DNA 1 187 -2 257 150 0 0 chr4 3116641 3116681 -199211666 + MER1B DNA MER1_type 1 40 -297 2258 133 18 3 chr4 3116681 3117013 -199211334 + MER1B DNA MER1_type 1 337 0 1434 158 74 37 chr4 3117819 3118116 -199210231 + AluJb SINE Alu 1 308 -4 770 223 150 0 chr4 3119423 3119616 -199208731 - MER58A DNA MER1_type -2 222 1 1092 168 59 25 chr4 3119707 3119742 -199208605 + AluJo SINE Alu 85 117 -195 180 0 0 0 chr4 3119742 3119762 -199208585 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 1092 168 59 25 chr4 3119762 3119928 -199208419 + AluJo SINE Alu 117 293 -19 29 60 0 0 chr4 3121466 3121516 -199206831 + AT_rich Low_complexity Low_complexity 1 50 0 1921 125 0 58 chr4 3122266 3122579 -199205768 - AluSx SINE Alu -17 295 1 24 53 0 0 chr4 3122767 3122805 -199205542 + AT_rich Low_complexity Low_complexity 1 38 0 242 120 220 0 chr4 3123856 3123906 -199204441 - AluSc SINE Alu 0 299 239 2341 109 0 0 chr4 3123907 3124209 -199204138 + AluSx SINE Alu 1 302 -10 1792 140 0 0 chr4 3124209 3124458 -199203889 - AluSx SINE Alu -62 250 1 22 0 0 0 chr4 3124721 3124743 -199203604 + AT_rich Low_complexity Low_complexity 1 22 0 2361 196 73 14 chr4 3124984 3125582 -199202765 - L1MB3 LINE L1 -7 6176 5548 1554 159 24 57 chr4 3129428 3129724 -199198623 + AluJb SINE Alu 2 287 -25 23 0 0 0 chr4 3129746 3129769 -199198578 + AT_rich Low_complexity Low_complexity 1 23 0 1852 163 27 0 chr4 3130947 3131247 -199197100 - AluJo SINE Alu -4 308 1 527 128 0 13 chr4 3131483 3131561 -199196786 + AluSc SINE Alu 216 292 -17 458 236 222 22 chr4 3132766 3132991 -199195356 - L1ME4a LINE L1 -16 6105 5836 2133 104 49 0 chr4 3133143 3133431 -199194916 - AluSg SINE Alu -8 302 1 1368 194 73 60 chr4 3133452 3133656 -199194691 - L1MB7 LINE L1 0 6178 5978 2268 79 7 0 chr4 3133656 3133934 -199194413 + AluSx SINE Alu 15 294 -18 1368 194 73 60 chr4 3133934 3134239 -199194108 - L1MB7 LINE L1 -200 5978 5628 677 190 12 0 chr4 3134291 3134454 -199193893 + CT-rich Low_complexity Low_complexity 4 168 0 1479 108 33 21 chr4 3134465 3134706 -199193641 - L1PB3 LINE L1 0 6154 5911 1984 146 7 10 chr4 3134830 3135138 -199193209 - AluSx SINE Alu -5 307 1 2060 145 3 0 chr4 3135418 3135722 -199192625 - AluSx SINE Alu -7 305 1 2123 118 3 25 chr4 3136198 3136513 -199191834 + AluSg SINE Alu 1 308 -2 1899 144 6 6 chr4 3137705 3138017 -199190330 + AluSx SINE Alu 1 312 0 27 29 0 0 chr4 3138522 3138556 -199189791 + AT_rich Low_complexity Low_complexity 1 34 0 2415 99 0 0 chr4 3139379 3139691 -199188656 + AluSx SINE Alu 1 312 0 2499 83 3 6 chr4 3139813 3140127 -199188220 - AluSp SINE Alu 0 313 1 310 250 177 39 chr4 3140165 3140397 -199187950 + L1ME4a LINE L1 5732 5995 -126 403 160 75 11 chr4 3140403 3140497 -199187850 + L1ME4a LINE L1 6021 6120 -1 2217 128 0 0 chr4 3140542 3140840 -199187507 - AluSg SINE Alu -12 298 1 901 299 46 46 chr4 3142280 3142801 -199185546 - ERVL LTR ERVL -351 5413 4893 1879 141 3 46 chr4 3144598 3144740 -199183607 + AluSx SINE Alu 5 129 -183 2539 48 0 3 chr4 3144740 3145032 -199183315 + AluY SINE Alu 1 291 -20 1879 141 3 46 chr4 3145032 3145195 -199183152 + AluSx SINE Alu 129 297 -15 279 266 0 0 chr4 3145350 3145414 -199182933 - MER3 DNA MER1_type -131 78 15 2195 118 0 32 chr4 3145519 3145832 -199182515 - AluSq SINE Alu -10 303 1 913 236 5 5 chr4 3146399 3146594 -199181753 + MER3 DNA MER1_type 15 209 0 198 191 0 0 chr4 3146903 3146945 -199181402 + (CATATA)n Simple_repeat Simple_repeat 3 44 0 1884 112 26 59 chr4 3146959 3146979 -199181368 + MER1B DNA MER1_type 47 66 -2646 2208 88 0 11 chr4 3146979 3147294 -199181053 + AluY SINE Alu 1 312 0 1884 112 26 59 chr4 3147294 3147383 -199180964 + MER1B DNA MER1_type 66 156 -2556 1700 116 100 107 chr4 3147383 3147814 -199180533 - MSTA LTR MaLR 0 428 1 1884 112 26 59 chr4 3147814 3148005 -199180342 + MER1B DNA MER1_type 156 339 0 217 200 60 0 chr4 3148006 3148056 -199180291 + (CATATA)n Simple_repeat Simple_repeat 6 58 0 210 288 34 0 chr4 3148067 3148126 -199180221 + L2 LINE L2 2569 2629 -685 23 0 0 0 chr4 3148140 3148163 -199180184 + AT_rich Low_complexity Low_complexity 1 23 0 1016 168 7 0 chr4 3148163 3148318 -199180029 - AluJb SINE Alu -23 289 134 2378 86 0 3 chr4 3148318 3148622 -199179725 - AluSg SINE Alu -7 303 1 972 219 129 4 chr4 3148626 3148905 -199179442 - L1MB8 LINE L1 -6 6172 5859 1610 93 4 31 chr4 3148950 3149175 -199179172 - AluSc SINE Alu -90 219 1 1084 168 13 5 chr4 3149267 3149573 -199178774 - MLT1A1 LTR MaLR 0 374 1 300 228 78 5 chr4 3149753 3149842 -199178505 + MIR SINE MIR 48 140 -68 1768 151 34 7 chr4 3149865 3150156 -199178191 + AluJo SINE Alu 1 299 -13 184 0 0 88 chr4 3150474 3150508 -199177839 + (TTTTTG)n Simple_repeat Simple_repeat 2 32 0 2154 105 0 14 chr4 3151426 3151749 -199176598 - AluY SINE Alu 0 319 1 1398 117 77 55 chr4 3151755 3151824 -199176523 - L1MA8 LINE L1 -1 6290 6224 1889 137 0 56 chr4 3151824 3152145 -199176202 + AluSg SINE Alu 1 303 -7 1398 117 77 55 chr4 3152145 3152349 -199175998 - L1MA8 LINE L1 -67 6224 6011 2201 105 14 0 chr4 3152358 3152644 -199175703 - AluSx SINE Alu -22 290 1 327 254 70 56 chr4 3153614 3153756 -199174591 - MER68 LTR ERV1 -66 496 353 789 158 30 8 chr4 3153768 3153901 -199174446 - MER68 LTR ERV1 -310 252 117 424 255 178 66 chr4 3153965 3154214 -199174133 - L1M4 LINE L1 -1095 5051 4744 1716 147 34 0 chr4 3154214 3154507 -199173840 - AluJo SINE Alu -9 303 1 424 255 178 66 chr4 3154507 3154634 -199173713 - L1M4 LINE L1 -1402 4744 4633 226 347 32 0 chr4 3154639 3154734 -199173613 - L1M4 LINE L1 -1567 4579 4482 37335 95 10 12 chr4 3157145 3163296 -199165051 - L1PA7 LINE L1 0 6154 11 1932 131 0 3 chr4 3163305 3163595 -199164752 - AluSg SINE Alu -21 289 1 847 151 19 25 chr4 3164927 3165086 -199163261 + AluJb SINE Alu 110 267 -45 3461 226 63 79 chr4 3165099 3165231 -199163116 - L1MEc LINE L1 -4963 1433 1300 2347 87 0 0 chr4 3165231 3165542 -199162805 - AluY SINE Alu 0 311 1 3461 226 63 79 chr4 3165542 3165801 -199162546 - L1MEc LINE L1 -5096 1300 1039 2077 125 7 0 chr4 3165801 3166098 -199162249 - AluSx SINE Alu -13 299 1 3461 226 63 79 chr4 3166098 3167137 -199161210 - L1MEc LINE L1 -5357 1039 24 200 309 125 44 chr4 3167140 3167276 -199161071 + L2 LINE L2 3117 3263 -9 2075 113 3 19 chr4 3167683 3168001 -199160346 - AluSq SINE Alu 0 313 1 272 348 8 59 chr4 3168196 3168314 -199160033 + L2 LINE L2 3202 3313 0 2427 53 0 10 chr4 3169893 3170195 -199158152 - AluY SINE Alu -12 299 1 183 80 0 0 chr4 3171141 3171166 -199157181 + (TTTC)n Simple_repeat Simple_repeat 3 27 0 2408 68 0 0 chr4 3172240 3172551 -199155796 - AluY SINE Alu 0 311 1 191 258 103 72 chr4 3174140 3174237 -199154110 + MIR SINE MIR 33 132 -76 297 56 0 0 chr4 3174973 3175009 -199153338 - U2 snRNA snRNA -152 36 1 210 71 0 0 chr4 3175813 3175841 -199152506 + (TG)n Simple_repeat Simple_repeat 2 29 0 245 297 11 0 chr4 3175856 3175947 -199152400 + (TG)n Simple_repeat Simple_repeat 2 93 0 299 327 0 0 chr4 3175962 3176112 -199152235 + (TG)n Simple_repeat Simple_repeat 2 151 0 223 221 0 29 chr4 3177020 3177088 -199151259 + G-rich Low_complexity Low_complexity 1 66 0 2057 107 3 20 chr4 3177106 3177406 -199150941 - AluSx SINE Alu -17 295 1 214 304 111 35 chr4 3178842 3179013 -199149334 - MIR SINE MIR -71 191 8 249 33 0 0 chr4 3179097 3179127 -199149220 + (TTTCC)n Simple_repeat Simple_repeat 1 30 0 1524 169 18 14 chr4 3179127 3179406 -199148941 - AluJb SINE Alu -32 280 1 670 290 238 30 chr4 3180124 3181601 -199146746 - L2 LINE L2 -39 3274 1466 232 194 32 32 chr4 3181744 3181806 -199146541 + L1ME4a LINE L1 5724 5785 -379 1472 153 102 4 chr4 3181855 3182130 -199146217 + AluJb SINE Alu 1 302 -10 330 115 0 51 chr4 3182135 3182213 -199146134 + (GGAA)n Simple_repeat Simple_repeat 4 77 0 314 335 92 13 chr4 3182450 3182602 -199145745 + L1ME4a LINE L1 5952 6115 -6 506 191 16 165 chr4 3182963 3183063 -199145284 - MER5A DNA MER1_type -24 165 52 2239 78 0 38 chr4 3183063 3183383 -199144964 - AluY SINE Alu -3 308 1 2062 90 0 0 chr4 3183383 3183660 -199144687 - AluY SINE Alu -15 296 20 506 191 16 165 chr4 3183660 3183752 -199144595 - MER5A DNA MER1_type -135 54 1 416 269 77 13 chr4 3184362 3184518 -199143829 + MER97b DNA MER1_type? 14 179 -874 203 186 17 85 chr4 3184968 3185027 -199143320 - MIR SINE MIR -119 143 89 3032 133 64 2 chr4 3185468 3185966 -199142381 + L1MB3 LINE L1 5612 6140 -43 1527 188 31 0 chr4 3185967 3186260 -199142087 + AluJb SINE Alu 1 302 -10 1628 149 26 36 chr4 3186286 3186594 -199141753 + AluJo SINE Alu 1 305 -7 1127 135 214 44 chr4 3186679 3186931 -199141416 + AluJo SINE Alu 1 295 -7 318 250 0 0 chr4 3186950 3187014 -199141333 + HAL1 LINE L1 1816 1879 -628 2340 77 10 3 chr4 3187385 3187696 -199140651 - AluSp SINE Alu 0 313 1 263 260 35 75 chr4 3187752 3187925 -199140422 + HAL1b LINE L1 746 911 -437 357 289 100 22 chr4 3188097 3188277 -199140070 - MLT1K LTR MaLR 0 588 395 1334 208 0 36 chr4 3188299 3188602 -199139745 - AluJo SINE Alu -20 292 1 825 241 45 0 chr4 3189844 3190043 -199138304 + MER3 DNA MER1_type 2 209 0 587 271 105 22 chr4 3191856 3192085 -199136262 - MLT1J2 LTR MaLR 0 450 203 1826 164 0 7 chr4 3192679 3192978 -199135369 + AluJb SINE Alu 1 297 -15 642 298 49 27 chr4 3193793 3194018 -199134329 - MIR SINE MIR -19 243 14 2109 126 3 0 chr4 3194440 3194749 -199133598 - AluSx SINE Alu -2 310 1 2172 88 10 0 chr4 3195485 3195781 -199132566 + AluSq SINE Alu 1 299 -14 2153 117 0 3 chr4 3197471 3197778 -199130569 + AluSx SINE Alu 1 306 -6 360 244 352 0 chr4 3197990 3198166 -199130181 - MER5C DNA MER1_type -2 322 85 626 271 128 44 chr4 3198726 3198954 -199129393 - L1ME1 LINE L1 -1 6165 5891 1431 177 37 31 chr4 3198954 3199248 -199129099 + AluJo SINE Alu 1 296 -16 626 271 128 44 chr4 3199248 3199403 -199128944 - L1ME1 LINE L1 -275 5891 5750 30 17 0 34 chr4 3200746 3200772 -199127575 + AT_rich Low_complexity Low_complexity 1 26 -31 672 202 8 8 chr4 3200772 3200901 -199127446 + FLAM_C SINE Alu 3 131 -2 30 17 0 34 chr4 3200901 3200912 -199127435 + AT_rich Low_complexity Low_complexity 26 36 -21 1542 173 3 53 chr4 3200912 3201212 -199127135 + AluJo SINE Alu 3 287 -15 30 17 0 34 chr4 3201212 3201232 -199127115 + AT_rich Low_complexity Low_complexity 36 57 0 267 221 104 52 chr4 3201326 3201480 -199126867 - L1ME4a LINE L1 -5 6116 5955 1301 153 35 9 chr4 3201784 3202013 -199126334 + MER46A DNA MER2_type 2 236 0 28 48 0 0 chr4 3202128 3202170 -199126177 + AT_rich Low_complexity Low_complexity 1 42 0 2325 81 0 7 chr4 3207120 3207428 -199120919 - AluSx SINE Alu -6 306 1 21 36 0 0 chr4 3207896 3207924 -199120423 + AT_rich Low_complexity Low_complexity 1 28 0 27 29 0 0 chr4 3208368 3208402 -199119945 + AT_rich Low_complexity Low_complexity 1 34 0 715 297 50 5 chr4 3209611 3209830 -199118517 - MIR SINE MIR -16 246 18 225 354 0 0 chr4 3210409 3210491 -199117856 - L2 LINE L2 -9 3304 3223 236 321 104 19 chr4 3211734 3211840 -199116507 + L2 LINE L2 3199 3313 0 258 288 88 40 chr4 3212634 3212759 -199115588 + MIR SINE MIR 132 262 0 2688 7 0 0 chr4 3212968 3213264 -199115083 + AluYa5 SINE Alu 1 296 -15 2356 85 0 0 chr4 3214576 3214869 -199113478 + AluSx SINE Alu 2 294 -18 183 156 0 0 chr4 3215158 3215190 -199113157 + (TG)n Simple_repeat Simple_repeat 1 32 0 340 325 124 12 chr4 3216997 3217166 -199111181 + MIR SINE MIR 8 195 -67 470 244 0 9 chr4 3218101 3218216 -199110131 - L1MB8 LINE L1 -1 6177 6064 338 346 45 13 chr4 3218344 3218500 -199109847 + MIR SINE MIR 39 199 -63 23 0 0 0 chr4 3222082 3222105 -199106242 + AT_rich Low_complexity Low_complexity 1 23 0 819 231 0 6 chr4 3222549 3222718 -199105629 + AluJb SINE Alu 138 305 -7 186 143 0 0 chr4 3224852 3224887 -199103460 + (GGA)n Simple_repeat Simple_repeat 1 35 0 184 143 71 0 chr4 3225239 3225309 -199103038 + (CA)n Simple_repeat Simple_repeat 1 75 0 461 139 66 12 chr4 3225355 3225521 -199102826 + (CA)n Simple_repeat Simple_repeat 1 175 0 264 196 54 18 chr4 3225603 3225771 -199102576 + (CA)n Simple_repeat Simple_repeat 1 174 0 405 158 67 6 chr4 3225786 3225950 -199102397 + (CA)n Simple_repeat Simple_repeat 1 174 0 1687 219 34 8 chr4 3226746 3227098 -199101249 - MLT1A1 LTR MaLR 0 365 5 215 314 25 59 chr4 3227369 3227487 -199100860 - L2 LINE L2 0 3272 3159 2052 209 128 24 chr4 3228749 3229256 -199099091 - MER68 LTR ERV1 -2 560 1 2317 95 0 0 chr4 3233259 3233564 -199094783 - AluSq SINE Alu -8 305 1 192 315 158 0 chr4 3243417 3243544 -199084803 - MIR3 SINE MIR -61 147 1 290 274 33 16 chr4 3247681 3247807 -199080540 - MIR SINE MIR -62 146 56 261 83 0 0 chr4 3247862 3247898 -199080449 + (T)n Simple_repeat Simple_repeat 1 36 0 393 355 29 6 chr4 3248730 3248902 -199079445 - MIR SINE MIR -66 196 21 274 289 22 37 chr4 3249043 3249178 -199079169 - L1ME4a LINE L1 -11 6110 5978 180 172 0 0 chr4 3249298 3249327 -199079020 + SUBTEL_sa Satellite Satellite 129 157 -17 499 267 67 0 chr4 3249849 3249999 -199078348 + MIR SINE MIR 40 199 -63 271 279 0 13 chr4 3250289 3250368 -199077979 - L2 LINE L2 -208 3064 2987 2328 72 26 0 chr4 3251410 3251714 -199076633 - AluSq SINE Alu -1 312 1 282 298 36 0 chr4 3251741 3251825 -199076522 + MIR SINE MIR 50 136 -72 28 0 0 0 chr4 3252163 3252191 -199076156 + GC_rich Low_complexity Low_complexity 1 28 0 299 318 98 0 chr4 3252817 3252949 -199075398 - L2 LINE L2 -50 3263 3119 188 244 56 11 chr4 3252990 3253080 -199075267 - L2 LINE L2 -339 2975 2882 244 331 19 69 chr4 3253409 3253569 -199074778 - L2 LINE L2 -554 2760 2609 246 259 17 0 chr4 3253932 3253990 -199074357 + MER63 DNA MER1_type 732 790 -272 321 345 104 36 chr4 3254783 3254953 -199073394 + L1M3 LINE L1 3975 4169 -1977 2267 91 10 0 chr4 3254953 3255262 -199073085 + AluSx SINE Alu 1 312 0 321 345 104 36 chr4 3255262 3255340 -199073007 + L1M3 LINE L1 4169 4240 -1906 269 274 105 8 chr4 3255756 3255880 -199072467 + L1M3 LINE L1 5506 5641 -539 3392 216 88 70 chr4 3255896 3255954 -199072393 - Charlie1 DNA MER1_type 0 2761 2706 2427 77 0 0 chr4 3255954 3256265 -199072082 + AluY SINE Alu 1 311 0 3392 216 88 70 chr4 3256265 3256721 -199071626 - Charlie1 DNA MER1_type -55 2706 2260 2143 58 0 81 chr4 3256721 3257031 -199071316 - AluY SINE Alu -13 298 14 3392 216 88 70 chr4 3257031 3257717 -199070630 - Charlie1 DNA MER1_type -501 2260 1538 256 340 42 14 chr4 3258109 3258253 -199070094 - L2 LINE L2 -55 3258 3111 251 353 77 32 chr4 3259721 3259942 -199068405 - L1ME4a LINE L1 -1910 5898 5668 261 169 51 0 chr4 3259959 3260018 -199068329 + HAL1 LINE L1 2026 2087 -420 720 309 62 7 chr4 3260039 3260343 -199068004 - L1ME4a LINE L1 -1176 4970 4650 2951 175 39 24 chr4 3260343 3260386 -199067961 - L1MB3 LINE L1 0 6183 6142 2318 86 0 0 chr4 3260386 3260699 -199067648 - AluSq SINE Alu 0 313 1 2951 175 39 24 chr4 3260699 3261061 -199067286 - L1MB3 LINE L1 -41 6142 5764 1824 162 3 3 chr4 3261061 3261364 -199066983 - AluJb SINE Alu -9 303 1 2951 175 39 24 chr4 3261364 3261547 -199066800 - L1MB3 LINE L1 -419 5764 5585 241 230 68 14 chr4 3261568 3261642 -199066705 - L1ME LINE L1 -476 6440 6363 1726 166 7 0 chr4 3261757 3262068 -199066279 + AluJo SINE Alu 1 312 0 499 167 67 0 chr4 3262169 3262289 -199066058 + L1PA13 LINE L1 5926 6053 -110 2617 26 0 3 chr4 3262649 3262956 -199065391 + AluY SINE Alu 1 306 -5 1980 118 26 3 chr4 3262967 3263273 -199065074 + AluSp SINE Alu 1 313 0 2155 87 0 14 chr4 3263427 3263714 -199064633 + AluSx SINE Alu 13 295 -17 393 296 82 25 chr4 3264021 3264264 -199064083 + MLT2E LTR ERVL 34 290 -338 255 248 17 94 chr4 3266808 3266925 -199061422 - L1MCc LINE L1 -6250 872 765 4783 243 107 79 chr4 3266925 3267254 -199061093 - L1MCc LINE L1 -957 5984 5666 2094 114 3 22 chr4 3267254 3267569 -199060778 - AluSq SINE Alu -4 309 1 4783 243 107 79 chr4 3267569 3268283 -199060064 - L1MCc LINE L1 -1275 5666 4973 522 46 0 0 chr4 3268283 3268348 -199059999 + (TTCC)n Simple_repeat Simple_repeat 1 65 0 1921 141 0 3 chr4 3268349 3268633 -199059714 - AluSx SINE Alu -29 283 1 4783 243 107 79 chr4 3268633 3269336 -199059011 - L1MCc LINE L1 -1968 4973 4291 2047 73 4 11 chr4 3269336 3269637 -199058710 - AluSg SINE Alu 0 311 13 4783 243 107 79 chr4 3269637 3270491 -199057856 - L1MCc LINE L1 -2650 4291 3462 2383 80 0 3 chr4 3270491 3270803 -199057544 - AluY SINE Alu 0 311 1 4783 243 107 79 chr4 3270803 3271256 -199057091 - L1MCc LINE L1 -3479 3462 3023 2224 113 0 6 chr4 3271256 3271567 -199056780 - AluSq SINE Alu -4 309 1 4783 243 107 79 chr4 3271567 3272936 -199055411 - L1MCc LINE L1 -3918 3023 1263 305 286 62 19 chr4 3273465 3273626 -199054721 - L1MCc LINE L1 -6235 188 21 912 264 134 26 chr4 3273658 3274045 -199054302 + Zaphod DNA AcHobo 349 777 -3254 2319 93 3 0 chr4 3274046 3274357 -199053990 - AluSx SINE Alu 0 312 1 4573 232 95 25 chr4 3274379 3275044 -199053303 + Zaphod DNA AcHobo 2409 3026 -1005 2182 101 53 63 chr4 3275044 3275422 -199052925 + THE1C LTR MaLR 1 374 -1 4573 232 95 25 chr4 3275422 3275689 -199052658 + Zaphod DNA AcHobo 3026 3273 -758 2054 129 0 3 chr4 3275689 3275983 -199052364 + AluSx SINE Alu 1 293 -19 4573 232 95 25 chr4 3275983 3276561 -199051786 + Zaphod DNA AcHobo 3273 4026 -5 1381 286 54 40 chr4 3277235 3277502 -199050845 + L1ME LINE L1 466 728 -5354 2074 131 3 0 chr4 3277502 3277800 -199050547 - AluSx SINE Alu -12 300 2 1381 286 54 40 chr4 3277800 3278439 -199049908 + L1ME LINE L1 728 1266 -4816 2256 106 0 0 chr4 3278458 3278769 -199049578 - AluY SINE Alu 0 311 1 340 297 101 0 chr4 3278822 3278970 -199049377 - L1ME3A LINE L1 -219 5951 5789 553 194 36 61 chr4 3279069 3279234 -199049113 + LTR33 LTR ERVL 5 165 -356 532 276 76 0 chr4 3279246 3279431 -199048916 + LTR33 LTR ERVL 303 501 -20 1862 96 75 4 chr4 3280448 3280728 -199047619 + AluSq SINE Alu 1 300 -13 1056 158 6 0 chr4 3280744 3280909 -199047438 + AluJb SINE Alu 141 306 -6 1474 216 20 73 chr4 3280938 3281336 -199047011 + MLT2D LTR ERVL 30 406 -8 212 205 0 0 chr4 3282936 3282975 -199045372 + MIR SINE MIR 102 140 -68 269 173 0 0 chr4 3285341 3285393 -199042954 - L1MB2 LINE L1 -1 6170 6119 1992 126 3 3 chr4 3285398 3285692 -199042655 - AluJb SINE Alu -18 294 1 1532 172 75 3 chr4 3285711 3285747 -199042600 - L1MB3 LINE L1 -1 6182 6150 3496 169 64 7 chr4 3285747 3286439 -199041908 - L1MA7 LINE L1 -3 6288 5558 1532 172 75 3 chr4 3286439 3286734 -199041613 - L1MB3 LINE L1 -33 6150 5827 1902 137 3 3 chr4 3287535 3287835 -199040512 - AluSx SINE Alu -12 300 1 489 301 115 27 chr4 3287837 3288133 -199040214 + LTR33 LTR ERVL 197 518 -3 236 123 7 101 chr4 3289062 3289200 -199039147 + (CCCCG)n Simple_repeat Simple_repeat 1 125 0 234 217 22 43 chr4 3289232 3289324 -199039023 + G-rich Low_complexity Low_complexity 6 95 0 28 99 0 0 chr4 3289352 3289443 -199038904 + GC_rich Low_complexity Low_complexity 1 91 0 263 83 0 21 chr4 3289487 3289535 -199038812 + (CGGGG)n Simple_repeat Simple_repeat 4 50 0 28 105 0 0 chr4 3289551 3289656 -199038691 + GC_rich Low_complexity Low_complexity 1 105 0 281 256 64 32 chr4 3290290 3290415 -199037932 + MIR SINE MIR 5 133 -75 2291 89 3 3 chr4 3291676 3291980 -199036367 + AluSq SINE Alu 1 304 -9 182 79 0 53 chr4 3291989 3292027 -199036320 + (CAAAAA)n Simple_repeat Simple_repeat 1 36 0 642 291 122 33 chr4 3292165 3292471 -199035876 - MLT1D LTR MaLR 0 505 143 1780 167 3 25 chr4 3292471 3292789 -199035558 - AluJo SINE Alu -1 311 1 642 291 122 33 chr4 3292789 3292942 -199035405 - MLT1D LTR MaLR -362 143 5 1335 243 179 11 chr4 3294013 3294654 -199033693 - HAL1 LINE L1 -611 1896 1148 1039 156 39 49 chr4 3294656 3294861 -199033486 - AluJo SINE Alu -18 294 92 1402 261 151 31 chr4 3294868 3295812 -199032535 - L1ME LINE L1 -4872 1208 79 222 275 0 14 chr4 3296334 3296403 -199031944 + MIR SINE MIR 166 233 -29 912 240 154 37 chr4 3296803 3297247 -199031100 - MLT1D LTR MaLR -9 496 1 241 257 0 71 chr4 3297855 3297995 -199030352 + (CTGGGG)n Simple_repeat Simple_repeat 4 133 0 453 219 38 19 chr4 3298216 3298321 -199030026 - MER53 DNA DNA -82 107 1 180 111 0 0 chr4 3299336 3299363 -199028984 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 232 262 278 0 chr4 3300799 3300925 -199027422 + MIR SINE MIR 21 181 -81 1005 247 100 25 chr4 3301208 3301655 -199026692 - MLT1F1 LTR MaLR -114 540 2 254 318 139 20 chr4 3302218 3302369 -199025978 - MLT1-int LTR MaLR -484 887 719 507 266 13 38 chr4 3307446 3307604 -199020743 + MIR SINE MIR 37 190 -72 1470 161 53 5 chr4 3308082 3308412 -199019935 + Tigger4(Zombi) DNA MER2_type 1 2731 0 257 324 54 0 chr4 3308501 3308575 -199019772 + MIR3 SINE MIR 91 168 -40 202 293 9 57 chr4 3308566 3308672 -199019675 + MER5A DNA MER1_type 18 118 -71 * 630 179 9 0 chr4 3308842 3308948 -199019399 + AluJo SINE Alu 36 142 -170 653 150 0 35 chr4 3309524 3309637 -199018710 + FRAM SINE Alu 59 167 -9 523 272 107 35 chr4 3310062 3310352 -199017995 - MLT1D LTR MaLR 0 505 195 85 35 0 0 chr4 3310534 3310647 -199017700 + AT_rich Low_complexity Low_complexity 1 113 0 2342 77 0 7 chr4 3310960 3311268 -199017079 - AluY SINE Alu 0 306 1 2076 204 77 6 chr4 3311372 3311893 -199016454 + MER68 LTR ERV1 3 560 -2 229 156 302 2 chr4 3312267 3312330 -199016017 - MER5C DNA MER1_type -104 85 4 891 154 18 24 chr4 3315709 3315878 -199012469 + AluJo SINE Alu 136 303 -9 1879 129 3 58 chr4 3316001 3316310 -199012037 - AluJo SINE Alu -20 292 1 369 217 24 21 chr4 3317639 3317764 -199010583 - LTR50 LTR ERVL -3 792 654 262 253 77 0 chr4 3318019 3318110 -199010237 - LTR50 LTR ERVL -697 98 1 185 0 0 39 chr4 3319147 3319173 -199009174 + (TTAA)n Simple_repeat Simple_repeat 4 28 0 680 254 24 15 chr4 3319242 3319447 -199008900 + Charlie1 DNA MER1_type 2555 2761 0 370 296 76 41 chr4 3320020 3320414 -199007933 - L1ME4a LINE L1 -267 5854 5533 207 0 0 0 chr4 3320414 3320437 -199007910 + (TG)n Simple_repeat Simple_repeat 1 23 0 * 306 0 0 0 chr4 3320436 3320470 -199007877 + (GA)n Simple_repeat Simple_repeat 1 34 0 232 254 164 26 chr4 3321396 3321585 -199006762 - L1ME4a LINE L1 -2340 5468 5254 962 117 25 77 chr4 3321883 3322079 -199006268 + MSTC LTR MaLR 1 186 -242 9193 166 46 10 chr4 3322079 3322817 -199005530 + L1PB4 LINE L1 3465 4175 -1981 1762 171 21 3 chr4 3322817 3323103 -199005244 - AluJo SINE Alu -21 291 1 9193 166 46 10 chr4 3323103 3324959 -199003388 + L1PB4 LINE L1 4175 6150 -6 874 171 96 21 chr4 3325008 3325195 -199003152 + MSTC LTR MaLR 227 427 -1 328 164 33 0 chr4 3327101 3327162 -199001185 + L2 LINE L2 3250 3312 -1 747 248 205 9 chr4 3327313 3327640 -199000707 - MLT1J LTR MaLR -112 399 9 226 250 45 11 chr4 3327788 3327876 -199000471 + L1ME4a LINE L1 5931 6021 -100 30 0 0 0 chr4 3327985 3328015 -199000332 + AT_rich Low_complexity Low_complexity 1 30 0 228 275 90 36 chr4 3328835 3329002 -198999345 - L1ME3A LINE L1 -214 5956 5781 326 233 12 12 chr4 3329078 3329164 -198999183 - L1ME3A LINE L1 -2322 5486 5401 1796 79 0 5 chr4 3329399 3329615 -198998732 - AluSx SINE Alu -25 285 71 2458 50 7 3 chr4 3329615 3329910 -198998437 - AluY SINE Alu -13 298 1 629 92 0 23 chr4 3329910 3329997 -198998350 - AluSx SINE Alu -226 87 3 471 306 150 22 chr4 3330072 3330618 -198997729 - L1ME3A LINE L1 -1152 4994 4379 571 254 96 44 chr4 3330714 3331099 -198997248 - L1ME3A LINE L1 -2108 4038 3634 212 196 0 39 chr4 3331118 3331169 -198997178 + CT-rich Low_complexity Low_complexity 4 52 0 25 0 0 0 chr4 3331224 3331249 -198997098 + AT_rich Low_complexity Low_complexity 1 25 0 232 191 0 0 chr4 3332225 3332267 -198996080 + Alu SINE Alu 1 42 -260 483 172 0 50 chr4 3332267 3332366 -198995981 + AluJo/FRAM SINE Alu 202 295 -17 2194 102 0 7 chr4 3332369 3332687 -198995660 + AluSx SINE Alu 1 316 0 323 281 109 1 chr4 3332716 3332957 -198995390 + LTR33A LTR ERVL 311 515 -8 376 328 42 0 chr4 3333088 3333207 -198995140 - L2 LINE L2 -1 3271 3148 772 226 28 9 chr4 3333253 3333470 -198994877 + L1MB3 LINE L1 5115 5335 -811 3452 208 64 25 chr4 3333563 3334409 -198993938 + L1MB3 LINE L1 5290 6168 -15 267 213 136 12 chr4 3334468 3334580 -198993767 + MIR3 SINE MIR 41 162 -54 2261 104 3 0 chr4 3334631 3334920 -198993427 - AluSp SINE Alu -22 291 2 1961 150 7 0 chr4 3335763 3336057 -198992290 + AluJo SINE Alu 2 297 -15 2108 180 42 9 chr4 3336074 3336501 -198991846 - MER65A LTR ERV1 0 445 5 456 321 0 39 chr4 3337723 3337980 -198990367 + G-rich Low_complexity Low_complexity 1 246 0 510 310 4 11 chr4 3338032 3338462 -198989885 + G-rich Low_complexity Low_complexity 1 426 0 191 252 65 89 chr4 3339217 3339340 -198989007 - MIR SINE MIR -32 230 111 325 305 57 14 chr4 3339894 3340035 -198988312 - MIR SINE MIR -14 248 102 1162 254 79 10 chr4 3340077 3340471 -198987876 - L1MC2 LINE L1 -6 6338 5918 2353 126 54 28 chr4 3341601 3342029 -198986318 - MER65A LTR ERV1 -6 439 1 3337 96 20 6 chr4 3342029 3342538 -198985809 - MER65A-int LTR ERV1 0 4871 4356 676 139 130 0 chr4 3342560 3342675 -198985672 - BC200 scRNA scRNA -66 134 5 3707 160 94 3 chr4 3342680 3343361 -198984986 - MER65A-int LTR ERV1 -524 4347 3605 2645 177 109 46 chr4 3343413 3343797 -198984550 - MER65A-int LTR ERV1 -1237 5094 4736 2429 86 0 0 chr4 3343797 3344098 -198984249 + AluY SINE Alu 1 301 -10 2645 177 109 46 chr4 3344098 3344891 -198983456 - MER65A-int LTR ERV1 -1595 4736 2805 1280 138 48 45 chr4 3344874 3345165 -198983182 - MER65A-int LTR ERV1 -2577 4021 3730 * 658 125 194 44 chr4 3345245 3345405 -198982942 - MER65A-int LTR ERV1 -2868 3730 3547 1343 180 82 96 chr4 3345668 3346393 -198981954 - MER65A-int LTR ERV1 -3123 3475 1546 6164 167 61 27 chr4 3346399 3347034 -198981313 - MER65A-int LTR ERV1 -2349 2522 1910 2073 164 0 0 chr4 3347034 3347346 -198981001 + AluJo SINE Alu 1 312 0 6164 167 61 27 chr4 3347346 3349005 -198979342 - MER65A-int LTR ERV1 -2961 1910 81 2592 130 34 20 chr4 3349087 3349526 -198978821 - MER65A LTR ERV1 0 445 1 1611 343 56 16 chr4 3349526 3350612 -198977735 - HERV16 LTR ERVL -2009 2987 1851 743 287 108 34 chr4 3351090 3351564 -198976783 + L1ME3A LINE L1 2684 3192 -2954 * 1178 235 119 82 chr4 3351549 3352154 -198976193 + L1ME3A LINE L1 3598 4234 -1912 2073 164 0 0 chr4 3352154 3352459 -198975888 + AluJb SINE Alu 8 312 0 1178 235 119 82 chr4 3352459 3352560 -198975787 + L1ME3A LINE L1 4234 4330 -1816 294 211 84 21 chr4 3352570 3352665 -198975682 + L1ME3A LINE L1 4567 4667 -1479 2053 141 0 13 chr4 3352677 3352989 -198975358 - AluJb SINE Alu -4 308 1 7107 172 44 15 chr4 3352996 3355489 -198972858 - L1MB3 LINE L1 0 6183 3611 829 142 18 17 chr4 3355494 3356071 -198972276 + CT-rich Low_complexity Low_complexity 1 577 0 826 165 35 18 chr4 3356074 3356244 -198972103 - L1MB3 LINE L1 -2528 3618 3446 2293 131 0 0 chr4 3356245 3356557 -198971790 - AluSx SINE Alu 0 312 1 883 114 8 0 chr4 3356570 3356693 -198971654 - AluJb SINE Alu -187 125 2 1906 214 11 15 chr4 3356698 3357236 -198971111 - L1MB3 LINE L1 -2695 3451 2916 236 245 0 0 chr4 3357470 3357523 -198970824 + L1ME3A LINE L1 5296 5348 -826 630 301 79 18 chr4 3357587 3357866 -198970481 + L1ME3A LINE L1 5669 5964 -206 329 224 6 0 chr4 3358977 3359133 -198969214 + (TG)n Simple_repeat Simple_repeat 1 157 0 453 238 4 7 chr4 3359160 3359544 -198968803 + (TG)n Simple_repeat Simple_repeat 1 382 0 287 289 0 0 chr4 3359573 3359656 -198968691 + (TG)n Simple_repeat Simple_repeat 1 83 0 301 208 0 31 chr4 3359679 3359809 -198968538 + (TG)n Simple_repeat Simple_repeat 2 127 0 269 250 226 12 chr4 3361811 3361979 -198966368 + MER58A DNA MER1_type 1 204 -20 207 43 29 100 chr4 3361986 3362056 -198966291 + (GGGA)n Simple_repeat Simple_repeat 2 66 0 342 246 27 55 chr4 3362518 3362628 -198965719 - L2 LINE L2 -6 3266 3160 291 192 0 0 chr4 3364957 3365030 -198963317 + (TG)n Simple_repeat Simple_repeat 1 73 0 691 182 0 7 chr4 3365138 3365286 -198963061 + L1MB3 LINE L1 6036 6182 -1 235 83 0 0 chr4 3365290 3365326 -198963021 + Charlie1 DNA MER1_type 2327 2362 -399 1949 145 13 7 chr4 3365341 3365645 -198962702 + AluSx SINE Alu 3 308 -4 348 297 199 66 chr4 3365657 3366004 -198962343 + L1MEc LINE L1 1893 2285 -4111 1412 248 68 56 chr4 3366004 3366769 -198961578 + L1M4 LINE L1 4316 5089 -1057 2226 136 3 0 chr4 3366781 3367091 -198961256 - AluJb SINE Alu -1 311 1 645 112 0 84 chr4 3367093 3367236 -198961111 - AluSq/x SINE Alu -179 133 3 2413 100 0 3 chr4 3367246 3367557 -198960790 - AluSg SINE Alu 0 310 1 911 317 92 63 chr4 3367557 3367577 -198960770 - L1M4 LINE L1 -2969 3177 3159 1787 183 0 13 chr4 3367577 3367889 -198960458 - AluJb SINE Alu -4 308 1 911 317 92 63 chr4 3367889 3367932 -198960415 - L1M4 LINE L1 -2987 3159 3119 2585 59 0 3 chr4 3367932 3368236 -198960111 - AluY SINE Alu -8 303 1 911 317 92 63 chr4 3368236 3368402 -198959945 - L1M4 LINE L1 -3027 3119 2959 2335 97 0 0 chr4 3368402 3368724 -198959623 - AluSx SINE Alu 0 312 1 911 317 92 63 chr4 3368724 3368751 -198959596 - L1M4 LINE L1 -3187 2959 2934 1934 117 81 0 chr4 3368751 3369024 -198959323 + AluSx SINE Alu 1 295 -17 911 317 92 63 chr4 3369024 3369802 -198958545 - L1M4 LINE L1 -3212 2934 2110 22 0 0 0 chr4 3369879 3369901 -198958446 + AT_rich Low_complexity Low_complexity 1 22 0 2346 103 0 7 chr4 3369905 3370207 -198958140 + AluSx SINE Alu 1 300 -12 2410 78 0 3 chr4 3370211 3370505 -198957842 + AluSc SINE Alu 3 295 -14 1800 163 50 0 chr4 3372265 3372547 -198955800 + AluJb SINE Alu 1 296 -16 331 253 234 7 chr4 3373479 3373633 -198954714 + MER5A DNA MER1_type 1 189 0 2170 123 3 0 chr4 3373758 3374058 -198954289 - AluSx SINE Alu -11 301 1 2094 130 13 3 chr4 3374060 3374361 -198953986 - AluSx SINE Alu -6 306 3 303 248 101 52 chr4 3374392 3374719 -198953628 + L1MEc LINE L1 3007 3349 -2866 373 220 93 34 chr4 3374728 3374846 -198953501 + L1MC5 LINE L1 7807 7931 -30 1750 151 28 14 chr4 3374855 3375140 -198953207 + AluJb SINE Alu 3 291 -21 238 296 116 73 chr4 3375168 3375607 -198952740 + L1MEc LINE L1 3361 3818 -2397 876 114 0 0 chr4 3375610 3375724 -198952623 + AluSp/q SINE Alu 175 288 -25 337 243 57 64 chr4 3375726 3375866 -198952481 + L1MEc LINE L1 3779 3917 -2298 2285 88 20 0 chr4 3375872 3376167 -198952180 + AluSp SINE Alu 1 301 -12 303 93 0 0 chr4 3376171 3376214 -198952133 + (TCCC)n Simple_repeat Simple_repeat 4 46 0 1691 157 3 25 chr4 3376217 3376503 -198951844 - AluJb SINE Alu -32 280 1 249 33 0 0 chr4 3376819 3376849 -198951498 + (A)n Simple_repeat Simple_repeat 1 30 0 248 83 28 0 chr4 3376855 3376891 -198951456 - MER4A LTR ERV1 -367 297 261 1218 168 5 37 chr4 3376947 3377161 -198951186 - AluJo SINE Alu -105 207 1 635 179 0 34 chr4 3378545 3378662 -198949685 - FLAM_C SINE Alu -24 119 7 593 228 152 0 chr4 3378721 3378879 -198949468 + MER21B LTR ERV1 5 186 -677 2304 121 0 0 chr4 3378928 3379225 -198949122 - AluSg SINE Alu -13 297 1 761 278 86 30 chr4 3379332 3379923 -198948424 + L1M4 LINE L1 3321 3944 -2202 1853 90 98 22 chr4 3380066 3380343 -198948004 - AluSg SINE Alu -7 303 6 2044 196 56 0 chr4 3380376 3380769 -198947578 - MER47B DNA MER2_type -2 416 2 2269 92 0 0 chr4 3381011 3381295 -198947052 - AluSc SINE Alu -21 288 5 421 282 89 81 chr4 3381545 3382238 -198946109 + L1MEd LINE L1 580 1255 -4864 317 297 19 26 chr4 3382700 3382855 -198945492 + L1MEd LINE L1 1311 1464 -4846 2514 79 0 0 chr4 3382855 3383158 -198945189 + AluY SINE Alu 1 303 -8 338 297 137 17 chr4 3383213 3383388 -198944959 - MIR SINE MIR -16 246 51 874 212 106 32 chr4 3383637 3383920 -198944427 + L1MB3 LINE L1 5879 6182 -1 2107 92 55 0 chr4 3383928 3384221 -198944126 + AluY SINE Alu 1 309 -2 2057 98 60 0 chr4 3384263 3384548 -198943799 + AluSp SINE Alu 3 304 -9 1469 205 26 10 chr4 3385685 3385987 -198942360 - AluJo SINE Alu -5 307 1 286 260 106 10 chr4 3385994 3386098 -198942249 - MIR SINE MIR -117 145 32 396 294 28 28 chr4 3386104 3386281 -198942066 + MER104 DNA MER2_type 1 177 -3 2002 118 27 0 chr4 3386937 3387233 -198941114 + AluSx SINE Alu 1 304 -8 2464 93 0 0 chr4 3387325 3387635 -198940712 - AluY SINE Alu -1 310 1 2161 123 3 3 chr4 3387664 3387957 -198940390 - AluSx SINE Alu -19 293 1 805 147 7 0 chr4 3388034 3388170 -198940177 + AluSg/x SINE Alu 176 312 0 2308 148 112 59 chr4 3388171 3388727 -198939620 - L1MD2 LINE L1 -291 6068 5484 495 0 0 0 chr4 3388767 3388822 -198939525 + (TG)n Simple_repeat Simple_repeat 2 56 0 1505 185 25 25 chr4 3388827 3389113 -198939234 - AluJo SINE Alu -26 286 1 476 267 182 15 chr4 3389162 3389439 -198938908 + L2 LINE L2 2784 3104 -209 282 304 236 20 chr4 3389684 3389832 -198938515 - MER5A DNA MER1_type 0 189 10 353 307 132 52 chr4 3390182 3390433 -198937914 + L1ME4a LINE L1 5840 6110 -11 2476 74 6 3 chr4 3390486 3390797 -198937550 + AluSp SINE Alu 1 312 -1 1203 181 78 4 chr4 3390852 3391123 -198937224 + MER58B DNA MER1_type 43 333 -8 3533 187 31 0 chr4 3391123 3391889 -198936458 + L1M4 LINE L1 4517 5306 -840 2290 126 0 0 chr4 3391944 3392245 -198936102 + AluSq SINE Alu 1 301 -12 977 273 88 33 chr4 3392415 3392911 -198935436 + L2 LINE L2 2503 3036 -277 890 171 6 47 chr4 3392912 3393082 -198935265 + FRAM SINE Alu 1 163 -13 203 191 24 0 chr4 3393087 3393129 -198935218 + L2 LINE L2 3032 3074 -239 1934 151 3 40 chr4 3393134 3393279 -198935068 + AluSx SINE Alu 1 150 -162 2381 67 0 54 chr4 3393279 3393594 -198934753 + AluY SINE Alu 1 298 -13 1934 151 3 40 chr4 3393594 3393772 -198934575 + AluSx SINE Alu 150 312 0 418 98 16 0 chr4 3393785 3393846 -198934501 + U7 snRNA snRNA 2 63 0 23 0 0 0 chr4 3393849 3393872 -198934475 + AT_rich Low_complexity Low_complexity 1 23 0 740 233 93 23 chr4 3393888 3394103 -198934244 + L2 LINE L2 3084 3313 0 21 57 0 0 chr4 3394510 3394545 -198933802 + AT_rich Low_complexity Low_complexity 1 35 0 2170 119 3 0 chr4 3394592 3394877 -198933470 + AluSg SINE Alu 1 286 -24 2233 109 0 0 chr4 3395119 3395404 -198932943 - AluSx SINE Alu -22 290 6 23 33 0 0 chr4 3395411 3395441 -198932906 + AT_rich Low_complexity Low_complexity 1 30 0 378 181 0 0 chr4 3397235 3397340 -198931007 + (CGG)n Simple_repeat Simple_repeat 2 106 0 555 16 0 0 chr4 3397342 3397406 -198930941 + (CTG)n Simple_repeat Simple_repeat 1 64 0 28 61 0 0 chr4 3397626 3397675 -198930672 + GC_rich Low_complexity Low_complexity 1 49 0 314 209 18 42 chr4 3397873 3398049 -198930298 + (CGGGG)n Simple_repeat Simple_repeat 1 171 0 452 234 6 34 chr4 3398084 3398259 -198930088 + (CGGGG)n Simple_repeat Simple_repeat 5 174 0 734 146 41 8 chr4 3399201 3399324 -198929023 + FRAM SINE Alu 28 154 -22 2152 99 20 3 chr4 3399338 3399631 -198928716 + AluSx SINE Alu 6 303 -9 1287 239 134 19 chr4 3399704 3400168 -198928179 + MLT1E LTR MaLR 8 524 -69 2115 156 51 0 chr4 3400264 3400635 -198927712 - MLT1B LTR MaLR 0 390 1 812 251 116 28 chr4 3400646 3401001 -198927346 + MLT1J LTR MaLR 17 402 -109 421 297 189 26 chr4 3453213 3453556 -198874791 + L2 LINE L2 2246 2644 -670 186 188 0 38 chr4 3454004 3454084 -198874263 + (CCCCAG)n Simple_repeat Simple_repeat 3 79 0 270 0 0 0 chr4 3454554 3454584 -198873763 + (CA)n Simple_repeat Simple_repeat 2 31 0 231 339 28 18 chr4 3454930 3455039 -198873308 + MER112 DNA MER1_type 151 260 0 694 108 0 0 chr4 3455301 3455394 -198872953 - AluJ SINE Alu -11 301 209 1337 146 5 0 chr4 3455455 3455661 -198872686 - AluJ SINE Alu -105 207 1 4074 165 93 25 chr4 3456513 3457296 -198871051 + L1MA9 LINE L1 4950 5847 -465 279 0 0 0 chr4 3457296 3457327 -198871020 + (TG)n Simple_repeat Simple_repeat 2 32 0 4074 165 93 25 chr4 3457327 3457778 -198870569 + L1MA9 LINE L1 5847 6266 -46 2520 129 27 3 chr4 3457797 3458162 -198870185 - THE1C LTR MaLR 0 375 2 10469 120 39 6 chr4 3458163 3459692 -198868655 - THE1C-int LTR MaLR 0 1580 1 2426 114 44 6 chr4 3459692 3460053 -198868294 - THE1C LTR MaLR 0 375 1 422 300 78 11 chr4 3460926 3461361 -198866986 - L1MEd LINE L1 -5031 1174 695 1503 180 25 3 chr4 3461610 3461893 -198866454 + AluJo SINE Alu 5 293 -19 2131 112 3 0 chr4 3462438 3462734 -198865613 - AluSx SINE Alu -15 297 1 213 148 0 49 chr4 3466486 3466547 -198861800 + (GGGA)n Simple_repeat Simple_repeat 1 58 0 272 289 90 19 chr4 3467536 3467692 -198860655 + L3 LINE CR1 1263 1429 -148 232 336 18 26 chr4 3468924 3469037 -198859310 + MIR SINE MIR 24 135 -73 295 273 136 9 chr4 3470130 3470240 -198858107 + L1ME3A LINE L1 6044 6167 -3 315 223 39 10 chr4 3470554 3470657 -198857690 - L1MEd LINE L1 -4936 1460 1355 552 275 61 77 chr4 3470667 3470993 -198857354 - L1MEd LINE L1 -5121 1275 958 2040 108 14 0 chr4 3470993 3471288 -198857059 + AluSx SINE Alu 1 299 -13 552 275 61 77 chr4 3471288 3471455 -198856892 - L1MEd LINE L1 -5438 958 790 616 288 106 12 chr4 3471532 3471938 -198856409 - L1MEd LINE L1 -5843 553 110 2089 139 0 0 chr4 3472446 3472749 -198855598 - AluSx SINE Alu -9 303 1 1765 280 95 30 chr4 3472944 3473173 -198855174 - L1ME3A LINE L1 -5 6165 5952 1700 139 36 53 chr4 3473173 3473294 -198855053 + AluSx SINE Alu 1 122 -190 204 111 0 0 chr4 3473294 3473330 -198855017 + (CAAAA)n Simple_repeat Simple_repeat 2 37 0 1700 139 36 53 chr4 3473330 3473511 -198854836 + AluSx SINE Alu 122 298 -14 1765 280 95 30 chr4 3473511 3474128 -198854219 - L1ME3A LINE L1 -218 5952 5376 1401 192 74 62 chr4 3474128 3474467 -198853880 + MER2 DNA MER2_type 2 344 0 1765 280 95 30 chr4 3474467 3475062 -198853285 - L1ME3A LINE L1 -794 5376 4628 184 241 76 0 chr4 3475694 3475773 -198852574 - L2 LINE L2 -1202 2112 2028 862 270 64 19 chr4 3475814 3476125 -198852222 - L2 LINE L2 -839 2475 2151 637 281 130 34 chr4 3476188 3476426 -198851921 + MIR SINE MIR 2 262 0 348 264 88 83 chr4 3476540 3476623 -198851724 + L1M4 LINE L1 2173 2254 -3892 604 192 14 110 chr4 3476623 3476769 -198851578 + FLAM_A SINE Alu 2 133 0 348 264 88 83 chr4 3476769 3476901 -198851446 + L1M4 LINE L1 2254 2389 -3757 542 342 59 5 chr4 3476987 3477584 -198850763 + L1M4 LINE L1 2549 3177 -2969 797 130 73 0 chr4 3477630 3477753 -198850594 + AluJb SINE Alu 2 133 -179 640 297 100 20 chr4 3478020 3478320 -198850027 - MLT1I LTR MaLR 0 409 86 367 351 49 9 chr4 3478396 3478621 -198849726 + L1M4 LINE L1 3604 3837 -2309 265 264 0 35 chr4 3478644 3478731 -198849616 - L2 LINE L2 -3 3310 3227 234 310 0 0 chr4 3478743 3478814 -198849533 + L1M4 LINE L1 3863 3933 -2213 324 194 6 56 chr4 3478878 3479038 -198849309 + (TTA)n Simple_repeat Simple_repeat 1 152 0 488 275 85 68 chr4 3479107 3479343 -198849004 + L1M4 LINE L1 4010 4249 -1897 25 0 0 0 chr4 3480486 3480511 -198847836 + AT_rich Low_complexity Low_complexity 1 25 0 242 333 72 9 chr4 3481735 3481846 -198846501 + MIR3 SINE MIR 43 160 -48 704 245 107 28 chr4 3482226 3482479 -198845868 + MER115 DNA AcHobo 410 682 -11 1600 276 122 21 chr4 3482735 3483366 -198844981 + L1MC4 LINE L1 6383 7077 -965 1154 241 148 66 chr4 3483427 3484196 -198844151 + L1MC4 LINE L1 7129 8042 0 259 313 55 8 chr4 3484752 3484880 -198843467 + MER58A DNA MER1_type 3 136 0 858 144 81 58 chr4 3488471 3488645 -198839702 - AluJo SINE Alu -85 227 50 240 318 87 8 chr4 3489334 3489460 -198838887 - L1P LINE L1 -1055 5091 4956 239 247 49 12 chr4 3492160 3492241 -198836106 + L2 LINE L2 3227 3310 -3 300 205 64 26 chr4 3496057 3496135 -198832212 - L1ME4a LINE L1 -6 6115 6035 1453 127 51 82 chr4 3497106 3497256 -198831091 + AluSx SINE Alu 1 154 -156 2284 97 0 0 chr4 3497256 3497554 -198830793 + AluSx SINE Alu 1 298 -14 1453 127 51 82 chr4 3497554 3497722 -198830625 + AluSx SINE Alu 154 310 0 1528 148 9 50 chr4 3497741 3498059 -198830288 + AluJo SINE Alu 6 310 -2 200 132 57 132 chr4 3498072 3498125 -198830222 - MER5B DNA MER1_type -71 107 59 193 313 45 0 chr4 3498543 3498610 -198829737 - L2 LINE L2 -19 3253 3184 456 254 56 8 chr4 3499959 3500085 -198828262 - MLT1H LTR MaLR -416 133 2 215 324 34 34 chr4 3502672 3502820 -198825527 + MIR SINE MIR 35 182 -80 323 280 0 50 chr4 3503993 3504175 -198824172 + G-rich Low_complexity Low_complexity 3 175 0 272 255 0 81 chr4 3504195 3504356 -198823991 + G-rich Low_complexity Low_complexity 2 149 0 224 238 20 75 chr4 3504672 3504819 -198823528 + G-rich Low_complexity Low_complexity 3 141 0 2338 101 0 0 chr4 3505912 3506219 -198822128 + AluSx SINE Alu 6 312 0 288 263 11 65 chr4 3511895 3512081 -198816266 + (CACCC)n Simple_repeat Simple_repeat 5 180 0 1900 136 85 25 chr4 3512489 3512843 -198815504 - THE1C LTR MaLR 0 375 1 185 229 306 19 chr4 3518592 3518749 -198809598 - L2 LINE L2 -245 3068 2867 212 305 11 0 chr4 3519087 3519182 -198809165 + C-rich Low_complexity Low_complexity 5 100 0 212 116 93 0 chr4 3520072 3520115 -198808232 - L2 LINE L2 -223 3049 3003 211 308 62 0 chr4 3523802 3523867 -198804480 - MIR SINE MIR -67 141 73 197 132 79 0 chr4 3524215 3524253 -198804094 - MIR SINE MIR -62 146 106 347 280 34 25 chr4 3527068 3527186 -198801161 - MIR SINE MIR -83 179 61 222 37 0 0 chr4 3529113 3529140 -198799207 + (TCCC)n Simple_repeat Simple_repeat 4 30 0 2220 122 0 0 chr4 3529142 3529591 -198798756 - AluSx SINE Alu 0 450 2 1493 150 108 0 chr4 3529899 3530159 -198798188 + AluJb SINE Alu 1 288 -24 1534 192 3 79 chr4 3530165 3530319 -198798028 + MLT1B LTR MaLR 29 193 -197 3297 166 92 7 chr4 3530319 3530904 -198797443 - LTR24C LTR ERV1 0 635 1 1534 192 3 79 chr4 3530904 3531140 -198797207 + MLT1B LTR MaLR 193 389 -1 499 281 91 40 chr4 3531434 3531764 -198796583 - L1M4 LINE L1 -2399 3747 3394 2125 127 0 0 chr4 3531764 3532056 -198796291 + AluSg SINE Alu 3 294 -16 499 281 91 40 chr4 3532056 3532099 -198796248 - L1M4 LINE L1 -2752 3394 3355 678 155 0 49 chr4 3532104 3532246 -198796101 + MLT2A2 LTR ERVL 1 135 -318 3160 102 14 7 chr4 3532258 3532699 -198795648 + MLT2A1 LTR ERVL 1 444 0 26808 56 4 8 chr4 3532699 3534564 -198793783 + HERVL-A1 LTR ERVL 1 1845 -3809 2448 81 0 0 chr4 3534564 3534874 -198793473 - AluY SINE Alu -1 310 1 26808 56 4 8 chr4 3534874 3536640 -198791707 + HERVL-A1 LTR ERVL 1845 3617 -2037 2694 122 21 0 chr4 3536648 3537076 -198791271 - LTR3b LTR ERVK 0 437 1 11946 67 4 4 chr4 3537076 3538729 -198789618 + HERVL LTR ERVL 3610 5263 -391 1453 105 16 47 chr4 3538729 3538987 -198789360 - THE1B LTR MaLR -114 250 1 225 316 25 0 chr4 3538994 3539073 -198789274 - MLT1J2 LTR MaLR -278 172 92 42 20 0 0 chr4 3541776 3541825 -198786522 + GC_rich Low_complexity Low_complexity 1 49 0 25 31 0 0 chr4 3541900 3541932 -198786415 + GC_rich Low_complexity Low_complexity 1 32 0 320 337 0 29 chr4 3545875 3546015 -198782332 + (TG)n Simple_repeat Simple_repeat 1 137 -30 1116 206 87 59 chr4 3546015 3546370 -198781977 - MLT1A1 LTR MaLR 0 365 1 320 337 0 29 chr4 3546370 3546401 -198781946 + (TG)n Simple_repeat Simple_repeat 137 167 0 663 246 3 0 chr4 3546436 3547582 -198780765 + (TG)n Simple_repeat Simple_repeat 1 1149 0 379 261 161 33 chr4 3548323 3548722 -198779625 - MLT1C LTR MaLR -4 463 18 569 270 133 0 chr4 3548980 3549176 -198779171 + MER58A DNA MER1_type 1 222 -2 357 273 209 5 chr4 3549544 3549731 -198778616 - MIR SINE MIR -3 259 35 502 297 16 16 chr4 3550279 3550464 -198777883 + MER58A DNA MER1_type 40 224 0 24 0 0 0 chr4 3551991 3552015 -198776332 + GC_rich Low_complexity Low_complexity 1 24 0 199 77 26 26 chr4 3552378 3552417 -198775930 + (GGGA)n Simple_repeat Simple_repeat 1 39 0 888 122 0 36 chr4 3552744 3552883 -198775464 + AluJb SINE Alu 1 134 -178 2122 122 0 0 chr4 3552886 3553180 -198775167 + AluSx SINE Alu 1 294 -18 643 163 0 0 chr4 3553181 3553279 -198775068 + AluSg/x SINE Alu 206 303 -9 315 187 66 0 chr4 3553280 3553371 -198774976 + MER96B DNA MER1_type? 259 355 -62 255 251 0 73 chr4 3554507 3554686 -198773661 + (CCCG)n Simple_repeat Simple_repeat 4 169 0 277 335 78 48 chr4 3557364 3557594 -198770753 - MLT1C LTR MaLR -1 466 230 193 248 69 59 chr4 3558450 3558551 -198769796 - L2 LINE L2 -179 3093 2992 2068 143 0 0 chr4 3558696 3559004 -198769343 + AluSx SINE Alu 1 308 -4 296 239 0 65 chr4 3560611 3560711 -198767636 - MLT1H LTR MaLR -80 508 383 333 282 150 0 chr4 3560754 3560967 -198767380 - MLT1H LTR MaLR -229 320 76 253 311 104 0 chr4 3562303 3562409 -198765938 + MIR SINE MIR 32 147 -63 210 261 29 14 chr4 3565692 3565761 -198762586 - MIR3 SINE MIR -27 181 112 212 204 13 40 chr4 3568232 3568384 -198759963 + CT-rich Low_complexity Low_complexity 1 148 0 423 262 16 33 chr4 3568425 3568608 -198759739 + CT-rich Low_complexity Low_complexity 1 180 0 242 425 0 6 chr4 3568607 3568788 -198759559 + C-rich Low_complexity Low_complexity 1 180 0 * 444 287 29 0 chr4 3568688 3568862 -198759485 + CT-rich Low_complexity Low_complexity 2 180 0 244 215 11 43 chr4 3568897 3569083 -198759264 + CT-rich Low_complexity Low_complexity 1 180 0 233 193 12 56 chr4 3569125 3569286 -198759061 + CT-rich Low_complexity Low_complexity 3 156 0 256 183 12 55 chr4 3569353 3569517 -198758830 + CT-rich Low_complexity Low_complexity 4 160 0 421 298 9 31 chr4 3569542 3569773 -198758574 + CT-rich Low_complexity Low_complexity 1 225 0 197 216 78 0 chr4 3572234 3572285 -198756062 - MIR SINE MIR -113 149 95 205 322 0 11 chr4 3573101 3573188 -198755159 + (CCTG)n Simple_repeat Simple_repeat 3 88 0 338 330 128 5 chr4 3573227 3573430 -198754917 + MIR SINE MIR 2 229 -33 453 195 0 23 chr4 3581668 3581755 -198746592 - AluJ/FLAM SINE Alu -227 85 1 528 265 6 6 chr4 3581774 3581936 -198746411 + L1M4 LINE L1 2874 3035 -3111 314 302 109 73 chr4 3581951 3582309 -198746038 + L1ME3 LINE L1 3 373 -5746 1952 125 0 72 chr4 3582526 3582662 -198745685 + AluSx SINE Alu 1 145 -167 2171 113 16 7 chr4 3582662 3582972 -198745375 + AluSq SINE Alu 1 313 0 1952 125 0 72 chr4 3582972 3583170 -198745177 + AluSx SINE Alu 145 311 -1 1875 136 0 11 chr4 3584264 3584550 -198743797 - AluSx SINE Alu -19 293 11 2269 81 7 0 chr4 3584570 3584866 -198743481 - AluSq SINE Alu -15 298 1 388 271 95 29 chr4 3584964 3585126 -198743221 + L1ME2 LINE L1 5121 5271 -924 1587 167 13 36 chr4 3585126 3585431 -198742916 + AluJo SINE Alu 1 298 -14 388 271 95 29 chr4 3585431 3585568 -198742779 + L1ME2 LINE L1 5271 5442 -753 386 284 28 124 chr4 3585586 3585804 -198742543 - L1M4 LINE L1 -3305 2841 2645 1094 317 108 25 chr4 3585829 3586208 -198742139 + L1ME3 LINE L1 3032 3378 -2751 2211 113 0 0 chr4 3586208 3586501 -198741846 - AluSx SINE Alu -19 293 1 1094 317 108 25 chr4 3586501 3586975 -198741372 + L1ME3 LINE L1 3378 3956 -2173 272 275 94 7 chr4 3587247 3587385 -198740962 + L1ME3 LINE L1 4342 4491 -1638 645 243 121 32 chr4 3588141 3588334 -198740013 + L1ME3 LINE L1 4565 4798 -1331 1532 148 10 79 chr4 3588334 3588639 -198739708 + AluJb SINE Alu 1 284 -28 645 243 121 32 chr4 3588639 3588758 -198739589 + L1ME3 LINE L1 4798 4905 -1224 331 275 89 108 chr4 3588792 3589061 -198739286 + L1ME3 LINE L1 5712 5975 -170 385 272 33 65 chr4 3589440 3589624 -198738723 + L1ME2 LINE L1 5689 5866 -296 1889 151 7 3 chr4 3591448 3591746 -198736601 - AluSx SINE Alu -13 299 1 216 347 51 0 chr4 3595453 3595551 -198732796 + L2 LINE L2 3205 3307 -6 258 237 0 0 chr4 3596901 3596960 -198731387 + G-rich Low_complexity Low_complexity 1 59 0 740 139 17 0 chr4 3599935 3600078 -198728269 + FLAM_C SINE Alu 1 145 0 195 129 0 0 chr4 3600850 3600881 -198727466 + (CAGAG)n Simple_repeat Simple_repeat 1 31 0 245 306 93 28 chr4 3601562 3601670 -198726677 + MIR3 SINE MIR 7 121 -87 218 279 25 25 chr4 3602323 3602402 -198725945 - L3 LINE CR1 -96 1481 1403 499 186 224 13 chr4 3602751 3602907 -198725440 + MER46A DNA MER2_type 48 236 0 2236 81 0 7 chr4 3607064 3607360 -198720987 + AluSx SINE Alu 19 312 0 218 247 106 12 chr4 3609351 3609436 -198718911 - MIR3 SINE MIR -3 205 113 222 317 49 0 chr4 3609573 3609655 -198718692 + MIR3 SINE MIR 77 162 -46 202 246 31 15 chr4 3609848 3609913 -198718434 + MIR3 SINE MIR 11 76 -132 209 169 0 78 chr4 3610103 3610180 -198718167 + C-rich Low_complexity Low_complexity 3 73 0 1742 127 20 31 chr4 3611361 3611653 -198716694 - AluJo SINE Alu -18 294 6 449 206 40 16 chr4 3611732 3611858 -198716489 - L1MEc LINE L1 -6231 165 37 325 333 77 27 chr4 3612493 3612676 -198715671 + L1ME2 LINE L1 5970 6161 -3 516 205 169 62 chr4 3614078 3614385 -198713962 - LTR16A1 LTR ERVL 0 457 118 499 240 187 18 chr4 3614536 3614761 -198713586 + L2 LINE L2 59 321 -2993 372 56 42 42 chr4 3614761 3614832 -198713515 + MER4B LTR ERV1 1 71 -539 446 194 20 0 chr4 3615034 3615132 -198713215 - LTR49-int LTR ERV1 -2884 3447 3348 309 200 0 0 chr4 3615193 3615253 -198713094 - LTR49-int LTR ERV1 -2997 3334 3275 460 134 49 120 chr4 3615313 3615390 -198712957 - LTR49-int LTR ERV1 -3059 3272 3208 2093 132 3 19 chr4 3615390 3615708 -198712639 + AluSq SINE Alu 1 313 0 460 134 49 120 chr4 3615708 3615772 -198712575 - LTR49-int LTR ERV1 -3123 3208 3141 6789 62 16 23 chr4 3615805 3616749 -198711598 - SVA Other Other 0 1386 450 6445 56 9 14 chr4 3616780 3617753 -198710594 - SVA Other Other -520 866 1 315 32 143 0 chr4 3617753 3617816 -198710531 + GA-rich Low_complexity Low_complexity 2 73 0 2322 130 33 41 chr4 3617827 3618376 -198709971 + MER4E LTR ERV1 51 766 0 509 274 83 34 chr4 3618445 3618649 -198709698 + L2 LINE L2 651 864 -2450 1295 51 93 0 chr4 3618653 3618868 -198709479 + LTR19A LTR ERV1 7 241 -245 238 237 126 47 chr4 3618890 3619080 -198709267 + L2 LINE L2 860 1064 -2250 225 307 93 13 chr4 3619056 3619206 -198709141 - L3 LINE CR1 -315 1262 1101 * 248 283 160 19 chr4 3619197 3619303 -198709044 + L2 LINE L2 3180 3300 -13 556 167 53 0 chr4 3619318 3619468 -198708879 + (TGGA)n Simple_repeat Simple_repeat 4 161 0 775 150 24 22 chr4 3619498 3620006 -198708341 + (TGGA)n Simple_repeat Simple_repeat 1 509 0 641 182 20 20 chr4 3620025 3620280 -198708067 + (TGGA)n Simple_repeat Simple_repeat 1 255 0 722 153 28 17 chr4 3620309 3620485 -198707862 + (TGGA)n Simple_repeat Simple_repeat 3 180 0 570 217 23 0 chr4 3620505 3620680 -198707667 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 861 146 14 17 chr4 3620709 3621064 -198707283 + (TGGA)n Simple_repeat Simple_repeat 1 353 0 1455 210 10 10 chr4 3621854 3622164 -198706183 + AluJo SINE Alu 1 310 -2 308 299 46 0 chr4 3622562 3622649 -198705698 - MIR SINE MIR -92 170 80 353 330 27 27 chr4 3623682 3623867 -198704480 + L2 LINE L2 3111 3295 -18 724 148 0 0 chr4 3623867 3623982 -198704365 - AluSx SINE Alu -4 308 194 1107 86 0 0 chr4 3623985 3624124 -198704223 - AluSx SINE Alu -174 139 1 752 178 0 30 chr4 3624168 3624303 -198704044 + FLAM_C SINE Alu 3 133 0 380 249 35 56 chr4 3624332 3624529 -198703818 - L1M4 LINE L1 -1492 4654 4462 875 349 69 4 chr4 3624544 3625066 -198703281 - L1M4 LINE L1 -1723 4423 3868 591 258 97 24 chr4 3625312 3625642 -198702705 + MER74B LTR ERVL 213 566 -56 1608 247 119 17 chr4 3625791 3625958 -198702389 + MER69B DNA AcHobo 520 668 -1858 1579 170 53 3 chr4 3625958 3626241 -198702106 - AluJb SINE Alu -15 297 1 1608 247 119 17 chr4 3626241 3626676 -198701671 + MER69B DNA AcHobo 668 1184 -42 217 255 61 0 chr4 3627395 3627479 -198700868 - MIR SINE MIR -60 148 104 203 362 61 43 chr4 3627900 3628063 -198700284 - MIR SINE MIR -81 181 16 346 226 24 0 chr4 3628166 3628250 -198700097 + MIR SINE MIR 77 162 -100 2071 123 6 22 chr4 3628275 3628593 -198699754 + AluSq SINE Alu 1 313 0 817 200 0 24 chr4 3628619 3628784 -198699563 + FAM SINE Alu 1 44 -5 647 178 58 66 chr4 3630096 3630377 -198697970 + MSTD LTR MaLR 2 327 -67 2179 122 0 0 chr4 3630377 3630688 -198697659 - AluSx SINE Alu -1 311 1 647 178 58 66 chr4 3630688 3630707 -198697640 + MSTD LTR MaLR 327 345 -49 540 257 14 7 chr4 3630690 3630838 -198697509 - MLT1C LTR MaLR -285 182 34 * 1848 114 0 29 chr4 3630847 3631119 -198697228 - AluSx SINE Alu -14 298 35 589 251 6 16 chr4 3631169 3631352 -198696995 - HAL1b LINE L1 -882 466 286 353 165 252 68 chr4 3631450 3631553 -198696794 + FLAM_A SINE Alu 3 124 -9 2259 95 7 0 chr4 3631622 3631927 -198696420 - AluSg SINE Alu -3 307 1 1169 195 0 56 chr4 3632321 3632500 -198695847 - AluJo SINE Alu -6 306 149 1664 153 29 52 chr4 3632500 3632808 -198695539 - AluJb SINE Alu -11 301 1 1169 195 0 56 chr4 3632808 3632930 -198695417 - AluJo SINE Alu -163 149 22 2475 103 4 9 chr4 3632937 3633432 -198694915 - MER41B LTR ERV1 -12 542 1 225 61 0 0 chr4 3633433 3633466 -198694881 - AluJo SINE Alu -266 33 1 318 276 264 23 chr4 3633702 3633876 -198694471 + L1ME2 LINE L1 5912 6127 -37 351 127 48 0 chr4 3633882 3633945 -198694402 + MLT1J LTR MaLR 6 71 -396 954 281 16 79 chr4 3634529 3635021 -198693326 + MLT1J LTR MaLR 37 497 -14 622 224 14 7 chr4 3635120 3635263 -198693084 + MER83C LTR ERV1 49 192 -181 238 226 32 0 chr4 3635321 3635383 -198692964 + MER83B LTR ERV1 134 197 -181 820 247 94 0 chr4 3635772 3635995 -198692352 + MER83C LTR ERV1 130 373 0 399 205 0 12 chr4 3636041 3636124 -198692223 - MIR SINE MIR -101 161 80 693 193 0 0 chr4 3638373 3638523 -198689824 + (TCCA)n Simple_repeat Simple_repeat 3 152 0 778 176 4 11 chr4 3638540 3638821 -198689526 + (TCCA)n Simple_repeat Simple_repeat 1 278 0 194 240 0 20 chr4 3638868 3638918 -198689429 - L2 LINE L2 -56 3216 3168 398 222 16 29 chr4 3639119 3639142 -198689205 - ORSL DNA AcHobo 0 275 253 3892 118 11 33 chr4 3639142 3639279 -198689068 - MER4A LTR ERV1 0 600 462 2146 115 0 3 chr4 3639279 3639583 -198688764 - AluSg1 SINE Alu 0 309 7 3892 118 11 33 chr4 3639583 3640058 -198688289 - MER4A LTR ERV1 -138 462 1 398 222 16 29 chr4 3640058 3640235 -198688112 - ORSL DNA AcHobo -22 253 41 3521 163 18 74 chr4 3640728 3641460 -198686887 + LTR8 LTR ERV1 1 691 0 1044 298 73 5 chr4 3643644 3644070 -198684277 + L1MC/D LINE L1 5296 5750 -2058 230 137 41 14 chr4 3644261 3644334 -198684013 + (CA)n Simple_repeat Simple_repeat 2 76 0 331 310 18 0 chr4 3646230 3646343 -198682004 - L1MC4 LINE L1 -7 8035 7921 1906 208 50 2 chr4 3646487 3646968 -198681379 - L1 LINE L1 -2178 3968 3465 721 128 29 87 chr4 3646968 3647140 -198681207 - MSTC LTR MaLR -242 186 25 1669 212 13 18 chr4 3647242 3647624 -198680723 + LTR8 LTR ERV1 312 691 0 1026 301 73 5 chr4 3650432 3650858 -198677489 + L1MC4a LINE L1 5296 5750 -2058 449 144 48 12 chr4 3651049 3651216 -198677131 + (CA)n Simple_repeat Simple_repeat 2 174 0 364 160 38 28 chr4 3651245 3651540 -198676807 + (CA)n Simple_repeat Simple_repeat 1 298 0 380 197 15 47 chr4 3651551 3651834 -198676513 + (CA)n Simple_repeat Simple_repeat 1 273 0 375 140 28 39 chr4 3651863 3652042 -198676305 + (CA)n Simple_repeat Simple_repeat 2 178 0 198 94 19 38 chr4 3652064 3652117 -198676230 + (CA)n Simple_repeat Simple_repeat 1 52 0 350 164 29 29 chr4 3652159 3652330 -198676017 + (CA)n Simple_repeat Simple_repeat 2 172 0 238 175 23 41 chr4 3652406 3652577 -198675770 + (CA)n Simple_repeat Simple_repeat 1 168 0 291 154 21 42 chr4 3652655 3652798 -198675549 + (CA)n Simple_repeat Simple_repeat 1 140 0 342 177 15 48 chr4 3652834 3653385 -198674962 + (CA)n Simple_repeat Simple_repeat 1 532 0 202 192 12 52 chr4 3653405 3653577 -198674770 + (CA)n Simple_repeat Simple_repeat 2 166 0 449 346 181 25 chr4 3653667 3654198 -198674149 + L1MC4a LINE L1 6067 6680 -1128 255 291 24 31 chr4 3654258 3654385 -198673962 + L1MC4 LINE L1 6862 6987 -1055 1027 220 65 17 chr4 3654555 3654983 -198673364 + MLT1D LTR MaLR 1 501 -4 601 346 146 14 chr4 3654986 3655474 -198672873 + L1MC4 LINE L1 7219 7770 -272 1728 152 14 0 chr4 3655703 3655993 -198672354 - AluJb SINE Alu -18 294 1 229 287 15 59 chr4 3657022 3657158 -198671189 - MLT1H LTR MaLR -404 145 16 259 209 15 15 chr4 3657550 3657617 -198670730 + LTR16B LTR ERVL 394 460 -4 294 363 0 0 chr4 3657651 3657830 -198670517 + G-rich Low_complexity Low_complexity 1 179 0 195 207 12 73 chr4 3657844 3657926 -198670421 - L2 LINE L2 -214 3099 3023 1145 165 53 102 chr4 3657931 3658092 -198670255 + L1PA15 LINE L1 5860 5999 -166 2166 108 0 16 chr4 3658092 3658406 -198669941 + AluSg1 SINE Alu 1 309 0 1145 165 53 102 chr4 3658406 3658566 -198669781 + L1PA15 LINE L1 5999 6165 0 448 158 21 0 chr4 3660360 3660455 -198667892 + GA-rich Low_complexity Low_complexity 1 97 0 220 310 42 0 chr4 3660489 3660560 -198667787 + MIR3 SINE MIR 114 187 -21 210 158 0 0 chr4 3661963 3662001 -198666346 + (TAA)n Simple_repeat Simple_repeat 3 40 0 623 244 5 5 chr4 3662008 3662388 -198665959 + (TCCA)n Simple_repeat Simple_repeat 1 380 0 840 158 11 6 chr4 3662410 3662587 -198665760 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 321 355 24 6 chr4 3662794 3662963 -198665384 + (CCCA)n Simple_repeat Simple_repeat 3 174 0 631 127 17 0 chr4 3662972 3663090 -198665257 + (TCCA)n Simple_repeat Simple_repeat 1 120 0 978 130 20 23 chr4 3664269 3664709 -198663638 + (TCCA)n Simple_repeat Simple_repeat 3 616 0 319 282 24 0 chr4 3664935 3665020 -198663327 + MIR SINE MIR 8 94 -168 347 273 93 12 chr4 3666745 3666906 -198661441 - L1ME3A LINE L1 -219 6020 5847 414 209 133 0 chr4 3667008 3667113 -198661234 - L1ME3A LINE L1 -559 5672 5554 548 143 51 41 chr4 3667124 3667222 -198661125 - FLAM_A SINE Alu -7 135 37 701 299 74 52 chr4 3667240 3668025 -198660322 - L1ME3A LINE L1 -707 5532 4732 342 254 0 0 chr4 3668129 3668239 -198660108 + (CA)n Simple_repeat Simple_repeat 2 111 0 471 180 17 133 chr4 3668241 3668474 -198659873 - L1ME3A LINE L1 -1533 4682 4477 1458 214 52 28 chr4 3668503 3668843 -198659504 + MLT2D LTR ERVL 1 352 -62 2294 77 0 0 chr4 3668843 3669128 -198659219 + AluSg SINE Alu 10 294 -16 1458 214 52 28 chr4 3669128 3669151 -198659196 + MLT2D LTR ERVL 352 373 -41 226 302 0 16 chr4 3669152 3669215 -198659132 + (CA)n Simple_repeat Simple_repeat 2 63 0 330 104 0 0 chr4 3669215 3669263 -198659084 + MLT2D LTR ERVL 367 414 0 2025 141 3 3 chr4 3669266 3669571 -198658776 - AluSx SINE Alu -7 305 1 233 314 66 7 chr4 3669597 3669734 -198658613 - L1ME3A LINE L1 -1777 4438 4294 465 340 49 21 chr4 3669750 3670058 -198658289 - L1MEc LINE L1 -4931 1274 987 1927 117 0 0 chr4 3670107 3670373 -198657974 - AluSx SINE Alu -17 295 30 185 169 123 46 chr4 3671121 3671186 -198657161 - L2 LINE L2 -2807 507 438 392 127 0 13 chr4 3673171 3673250 -198655097 + (CA)n Simple_repeat Simple_repeat 1 78 0 352 317 0 65 chr4 3673271 3673394 -198654953 - L1MCa LINE L1 -3971 2970 2856 1530 177 5 124 chr4 3673565 3673960 -198654387 - Tigger3(Golem) DNA MER2_type 0 3029 1 207 218 0 0 chr4 3673971 3674026 -198654321 + (CA)n Simple_repeat Simple_repeat 2 56 0 572 254 19 17 chr4 3674035 3674250 -198654097 - L1MC/D LINE L1 -577 6388 6187 309 325 67 39 chr4 3675021 3675637 -198652710 - L1MC4 LINE L1 0 8042 7315 938 257 70 43 chr4 3675715 3675861 -198652486 - L1MCa LINE L1 -4197 2925 2784 684 67 0 0 chr4 3675861 3675951 -198652396 + (TA)n Simple_repeat Simple_repeat 1 90 0 2300 86 0 0 chr4 3675958 3676249 -198652098 - AluY SINE Alu -20 291 1 938 257 70 43 chr4 3676249 3677015 -198651332 - L1MCa LINE L1 -4343 2779 1729 494 295 52 41 chr4 3677293 3677659 -198650688 - L1MCa LINE L1 -6003 420 51 427 319 47 0 chr4 3677686 3677921 -198650426 - L1ME LINE L1 -4755 1641 1396 824 139 16 4 chr4 3677921 3678439 -198649908 + (TG)n Simple_repeat Simple_repeat 1 524 0 828 249 53 84 chr4 3678475 3678489 -198649858 - L1ME LINE L1 -4917 1298 1285 2221 118 0 0 chr4 3678489 3678793 -198649554 - AluSx SINE Alu -7 305 2 828 249 53 84 chr4 3678793 3679344 -198649003 - L1ME LINE L1 -4930 1285 761 342 0 0 0 chr4 3679344 3679382 -198648965 + (TTTA)n Simple_repeat Simple_repeat 1 38 0 828 249 53 84 chr4 3679382 3679414 -198648933 - L1ME LINE L1 -5454 761 730 510 310 75 29 chr4 3679581 3679929 -198648418 - L1ME LINE L1 -5837 559 196 463 346 67 38 chr4 3680072 3680725 -198647622 - L1MC4a LINE L1 -1883 5925 5254 429 306 52 8 chr4 3680967 3680989 -198647358 - L1MC4a LINE L1 -1087 5059 5039 809 113 38 38 chr4 3680989 3681122 -198647225 - FLAM_C SINE Alu 0 133 1 429 306 52 8 chr4 3681122 3681233 -198647114 - L1MC4a LINE L1 -1107 5039 4920 454 245 71 0 chr4 3681288 3681443 -198646904 + MER92B LTR ERV1 74 239 -397 528 256 8 0 chr4 3682167 3682300 -198646047 - MLT1C LTR MaLR -14 453 320 398 388 0 0 chr4 3682770 3682948 -198645399 + (TG)n Simple_repeat Simple_repeat 1 178 0 547 350 0 0 chr4 3682980 3683343 -198645004 + (TG)n Simple_repeat Simple_repeat 1 363 0 508 343 0 8 chr4 3683370 3683869 -198644478 + (TG)n Simple_repeat Simple_repeat 1 495 0 198 319 0 0 chr4 3683891 3684035 -198644312 + (TG)n Simple_repeat Simple_repeat 1 144 0 499 282 0 39 chr4 3684053 3684234 -198644113 + (TG)n Simple_repeat Simple_repeat 1 174 0 2141 102 0 0 chr4 3684926 3685210 -198643137 - AluSx SINE Alu -20 292 9 322 263 150 0 chr4 3685872 3686005 -198642342 - L2 LINE L2 -511 2803 2651 298 151 0 129 chr4 3687854 3687947 -198640400 - L2 LINE L2 -189 3083 3003 200 297 54 27 chr4 3688006 3688117 -198640230 + MIR SINE MIR 7 120 -142 267 287 130 0 chr4 3688266 3688374 -198639973 - MIR SINE MIR -61 201 80 402 74 0 0 chr4 3688598 3688652 -198639695 + (TTCA)n Simple_repeat Simple_repeat 4 57 0 190 345 95 9 chr4 3688836 3688952 -198639395 - MER5A DNA MER1_type -49 140 15 205 345 129 0 chr4 3689542 3689681 -198638666 + MIR SINE MIR 104 260 -2 513 121 0 0 chr4 3690452 3690535 -198637812 + (TGAG)n Simple_repeat Simple_repeat 1 83 0 1056 163 0 14 chr4 3690548 3691088 -198637259 + (TGAG)n Simple_repeat Simple_repeat 1 357 0 427 301 106 34 chr4 3691300 3691536 -198636811 + MIR SINE MIR 10 262 0 280 263 113 42 chr4 3691624 3691837 -198636510 + L2 LINE L2 2838 3065 -248 267 305 76 29 chr4 3692729 3692834 -198635513 + L2 LINE L2 3159 3268 -4 548 253 57 26 chr4 3693287 3693481 -198634866 - MER63A DNA MER1_type -10 200 1 329 313 12 6 chr4 3693547 3693710 -198634637 + (CA)n Simple_repeat Simple_repeat 1 164 0 681 142 35 0 chr4 3694072 3694241 -198634106 + (TCCA)n Simple_repeat Simple_repeat 4 178 0 724 144 28 31 chr4 3694291 3694648 -198633699 + (TCCA)n Simple_repeat Simple_repeat 1 355 0 843 94 53 0 chr4 3694664 3694835 -198633512 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 853 100 47 0 chr4 3694872 3695042 -198633305 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 874 138 44 3 chr4 3695059 3695409 -198632938 + (TCCA)n Simple_repeat Simple_repeat 1 364 0 253 116 87 0 chr4 3695513 3695582 -198632765 + (TG)n Simple_repeat Simple_repeat 2 76 0 417 144 46 61 chr4 3697162 3697600 -198630747 + (CA)n Simple_repeat Simple_repeat 1 431 0 377 183 30 55 chr4 3697612 3697776 -198630571 + (CA)n Simple_repeat Simple_repeat 1 160 0 202 143 26 65 chr4 3697799 3697953 -198630394 + (CA)n Simple_repeat Simple_repeat 2 149 0 495 108 21 59 chr4 3697975 3698161 -198630186 + (CA)n Simple_repeat Simple_repeat 2 180 0 318 313 142 4 chr4 3698531 3698764 -198629583 + MLT1H LTR MaLR 1 265 -284 2220 128 42 28 chr4 3699172 3699530 -198628817 - THE1B LTR MaLR 0 364 2 1396 219 42 0 chr4 3699758 3700091 -198628256 - MLT1B LTR MaLR -31 359 13 542 342 43 40 chr4 3700839 3701190 -198627157 - L1M4c LINE L1 -3618 2528 2177 404 166 14 48 chr4 3701245 3701390 -198626957 + CT-rich Low_complexity Low_complexity 4 143 0 643 115 0 73 chr4 3701392 3701584 -198626763 + (TCCC)n Simple_repeat Simple_repeat 2 179 0 603 156 15 46 chr4 3701596 3701945 -198626402 + CT-rich Low_complexity Low_complexity 1 337 0 1465 187 13 13 chr4 3701947 3702257 -198626090 + LOR1a LTR ERV1 188 497 0 396 341 105 73 chr4 3702271 3702820 -198625527 - L1M4c LINE L1 -345 1231 701 2692 118 3 0 chr4 3702820 3703194 -198625153 - THE1C LTR MaLR 0 375 1 396 341 105 73 chr4 3703194 3703684 -198624663 - L1M4c LINE L1 -875 701 20 422 267 9 0 chr4 3703913 3704029 -198624318 - MLT1A2 LTR MaLR 0 374 258 829 236 13 81 chr4 3704033 3704342 -198624005 - MLT1A2 LTR MaLR -83 291 4 3897 101 45 62 chr4 3704419 3705064 -198623283 - MER51A LTR ERV1 0 634 1 600 151 0 92 chr4 3705442 3705486 -198622861 + MLT1C LTR MaLR 1 47 -420 1449 147 140 29 chr4 3705486 3705758 -198622589 + AluJo SINE Alu 1 302 0 600 151 0 92 chr4 3705758 3705865 -198622482 + MLT1C LTR MaLR 47 138 -329 988 276 100 22 chr4 3705865 3706248 -198622099 - L1ME LINE L1 -588 5578 5226 1620 168 0 11 chr4 3706248 3706534 -198621813 - AluJb SINE Alu 0 312 30 988 276 100 22 chr4 3706534 3706897 -198621450 - L1ME LINE L1 -940 5226 4755 381 297 182 0 chr4 3707011 3707176 -198621171 + MIR SINE MIR 65 259 -3 434 286 86 0 chr4 3707177 3707317 -198621030 + MIR SINE MIR 5 156 -106 28 0 0 0 chr4 3707693 3707721 -198620626 + AT_rich Low_complexity Low_complexity 1 28 0 295 262 0 78 chr4 3708600 3708841 -198619506 + G-rich Low_complexity Low_complexity 1 222 0 283 402 16 16 chr4 3710027 3710211 -198618136 - MIR SINE MIR -56 206 23 598 298 174 11 chr4 3710804 3711160 -198617187 + L2 LINE L2 2900 3313 0 395 302 11 22 chr4 3711244 3711423 -198616924 + (TGGA)n Simple_repeat Simple_repeat 2 178 0 245 292 18 48 chr4 3711645 3711813 -198616534 + (TGGG)n Simple_repeat Simple_repeat 2 164 0 2217 219 50 9 chr4 3712966 3713545 -198614802 + LTR26 LTR ERV1 1 603 0 248 290 30 40 chr4 3713674 3713774 -198614573 - MIR SINE MIR -56 206 108 183 208 19 57 chr4 3713919 3713972 -198614375 - MIR3 SINE MIR -46 162 112 191 250 0 54 chr4 3714796 3714852 -198613495 + L2 LINE L2 2992 3044 -228 981 248 100 12 chr4 3716809 3717229 -198611118 + MLT1C LTR MaLR 1 457 -10 521 118 0 21 chr4 3717473 3717566 -198610781 + (TCCC)n Simple_repeat Simple_repeat 2 92 0 579 244 72 16 chr4 3719639 3719832 -198608515 - MER21B LTR ERV1 -45 818 615 332 182 39 0 chr4 3719829 3719906 -198608441 - MER21B LTR ERV1 -169 694 615 * 2026 196 70 0 chr4 3719903 3720347 -198608000 - MER21B LTR ERV1 -169 694 220 366 159 0 0 chr4 3720354 3720417 -198607930 - MER21B LTR ERV1 -581 282 220 374 113 0 70 chr4 3720424 3720495 -198607852 - MER21B LTR ERV1 -581 282 217 * 1460 165 14 25 chr4 3720494 3720779 -198607568 - MER21B LTR ERV1 -581 282 1 323 324 99 38 chr4 3720931 3721193 -198607154 + L2 LINE L2 3001 3278 -35 244 350 49 0 chr4 3721309 3721432 -198606915 - MIR SINE MIR -132 130 2 321 288 174 29 chr4 3721552 3721833 -198606514 - L2 LINE L2 -2 3270 2949 317 284 88 10 chr4 3721908 3722102 -198606245 + L1MEc LINE L1 35 243 -6153 4094 269 50 10 chr4 3722174 3723693 -198604654 + L1MEc LINE L1 2167 3700 -2515 441 306 38 25 chr4 3723932 3724089 -198604258 - MIR SINE MIR -66 196 38 1032 191 14 0 chr4 3725284 3725494 -198602853 - Tigger2 DNA MER2_type -25 2693 2481 1979 160 0 0 chr4 3725495 3725807 -198602540 + AluJb SINE Alu 1 312 0 467 262 74 87 chr4 3726007 3726236 -198602111 - HAL1 LINE L1 -1189 1318 1093 361 292 72 41 chr4 3727615 3727810 -198600537 - MIR SINE MIR -2 260 60 571 250 61 80 chr4 3728097 3728473 -198599874 + MLT1B LTR MaLR 7 375 -15 213 325 26 0 chr4 3729197 3729311 -198599036 + (TGAG)n Simple_repeat Simple_repeat 2 118 0 450 336 80 6 chr4 3730492 3730816 -198597531 - LTR16A1 LTR ERVL -51 406 59 312 208 78 0 chr4 3730935 3731012 -198597335 + MLT1A1 LTR MaLR 1 83 -291 1203 200 102 10 chr4 3731232 3731565 -198596782 + MLT1A1 LTR MaLR 43 365 0 338 361 38 13 chr4 3732337 3732495 -198595852 - HAL1b LINE L1 -673 675 514 271 174 37 28 chr4 3734068 3734147 -198594200 + MIR SINE MIR 106 184 -78 196 342 146 19 chr4 3734314 3734630 -198593717 + L2 LINE L2 2842 3197 -75 1328 226 72 0 chr4 3734677 3735036 -198593311 - L1MB3 LINE L1 -23 6160 5776 273 352 40 8 chr4 3735060 3735185 -198593162 - L3 LINE CR1 -90 1487 1359 202 258 21 0 chr4 3735589 3735653 -198592694 + MIR SINE MIR 94 158 -104 459 233 0 0 chr4 3736971 3737100 -198591247 + (TG)n Simple_repeat Simple_repeat 1 129 0 233 305 191 0 chr4 3737117 3737222 -198591125 + MIR SINE MIR 22 146 -62 214 316 235 30 chr4 3737366 3737762 -198590585 + L2 LINE L2 2298 2774 -540 235 250 18 0 chr4 3738202 3738258 -198590089 - MIR3 SINE MIR -43 165 109 474 269 83 0 chr4 3739933 3740089 -198588258 - MER57A LTR ERV1 0 403 235 498 221 31 0 chr4 3740098 3740225 -198588122 - MER57A LTR ERV1 -272 131 1 1210 217 127 42 chr4 3740283 3740693 -198587654 + LTR56 LTR ERV1 1 445 0 203 163 0 61 chr4 3741494 3741543 -198586804 + CT-rich Low_complexity Low_complexity 6 51 0 427 256 51 70 chr4 3741560 3741716 -198586631 - MIR SINE MIR -2 260 108 756 219 12 0 chr4 3743291 3743460 -198584887 - MER41D LTR ERV1 0 557 387 434 271 87 5 chr4 3744747 3744965 -198583382 + MER89 LTR ERV1 1 236 -323 707 35 40 52 chr4 3744965 3745139 -198583208 + (TG)n Simple_repeat Simple_repeat 1 172 0 576 125 0 61 chr4 3747262 3747790 -198580557 + (TG)n Simple_repeat Simple_repeat 1 495 0 384 271 16 8 chr4 3748701 3748823 -198579524 + MER45A DNA AcHobo 37 159 -19 1026 155 3 8 chr4 3749609 3749984 -198578363 + (TCCA)n Simple_repeat Simple_repeat 1 372 0 183 80 0 0 chr4 3750000 3750025 -198578322 + (TTCC)n Simple_repeat Simple_repeat 2 26 0 257 329 125 54 chr4 3750028 3750323 -198578024 - L2 LINE L2 0 3272 2957 945 224 13 47 chr4 3750568 3750800 -198577547 - MER58A DNA MER1_type 0 224 1 1174 277 83 29 chr4 3751331 3751814 -198576533 + MLT1H LTR MaLR 37 545 -4 223 120 20 20 chr4 3751869 3751919 -198576428 + GA-rich Low_complexity Low_complexity 4 53 0 218 214 0 36 chr4 3751967 3752023 -198576324 + GA-rich Low_complexity Low_complexity 2 55 0 856 79 28 17 chr4 3752106 3752283 -198576064 + (CA)n Simple_repeat Simple_repeat 2 180 0 233 384 13 25 chr4 3752872 3753031 -198575316 + L2 LINE L2 2724 2880 -434 189 273 0 0 chr4 3754626 3754670 -198573677 - MIR SINE MIR -3 259 216 698 299 40 26 chr4 3755462 3755810 -198572537 - L1M4 LINE L1 -1241 4905 4553 241 241 17 0 chr4 3756467 3756525 -198571822 + CT-rich Low_complexity Low_complexity 2 60 0 1355 179 50 22 chr4 3756776 3757072 -198571275 - MLT1A2 LTR MaLR 0 374 67 2906 85 0 8 chr4 3757072 3757450 -198570897 + THE1C LTR MaLR 1 375 0 1355 179 50 22 chr4 3757450 3757471 -198570876 - MLT1A2 LTR MaLR -307 67 48 23 0 0 0 chr4 3757854 3757877 -198570470 + AT_rich Low_complexity Low_complexity 1 23 0 401 318 28 5 chr4 3758389 3758600 -198569747 - L1MC4 LINE L1 -1029 7013 6798 1018 126 6 16 chr4 3759118 3759188 -198569159 + (TCCC)n Simple_repeat Simple_repeat 1 249 0 1018 126 6 16 chr4 3759188 3759370 -198568977 + (TCCC)n Simple_repeat Simple_repeat 1 180 0 201 293 0 0 chr4 3760283 3760358 -198567989 + GA-rich Low_complexity Low_complexity 1 75 0 192 380 50 0 chr4 3760713 3760813 -198567534 + MIR SINE MIR 79 183 -79 455 247 0 46 chr4 3762332 3762707 -198565640 + GA-rich Low_complexity Low_complexity 1 357 0 273 325 6 24 chr4 3762664 3762830 -198565517 + G-rich Low_complexity Low_complexity 4 166 0 * 303 186 70 23 chr4 3762751 3762880 -198565467 + (TGAG)n Simple_repeat Simple_repeat 2 136 0 243 243 0 34 chr4 3762884 3763061 -198565286 + GA-rich Low_complexity Low_complexity 4 174 0 1874 131 19 44 chr4 3764599 3764919 -198563428 - AluSx SINE Alu 0 312 1 492 294 37 0 chr4 3764935 3765122 -198563225 - L1MC3 LINE L1 -9 7776 7583 254 191 0 0 chr4 3765242 3765289 -198563058 - L1MC3 LINE L1 -636 7149 7103 586 263 97 64 chr4 3765347 3765720 -198562627 + MLT1D LTR MaLR 6 390 -115 2214 92 0 31 chr4 3766134 3766451 -198561896 + AluY SINE Alu 1 307 -4 1334 209 40 62 chr4 3766501 3766987 -198561360 + MER51A LTR ERV1 1 634 0 318 291 146 25 chr4 3767154 3767312 -198561035 + MIR SINE MIR 8 184 -78 361 385 23 8 chr4 3769124 3769381 -198558966 - HERVL LTR ERVL -1048 4606 4346 363 228 0 0 chr4 3770183 3770275 -198558072 + (CA)n Simple_repeat Simple_repeat 1 92 0 267 316 54 57 chr4 3770542 3770874 -198557473 + L1 LINE L1 3522 3852 -2294 211 279 49 0 chr4 3770931 3770992 -198557355 - L2 LINE L2 0 3313 3250 21 36 0 0 chr4 3770996 3771024 -198557323 + AT_rich Low_complexity Low_complexity 1 28 0 2484 68 0 3 chr4 3771321 3771632 -198556715 + AluY SINE Alu 1 310 -1 355 273 93 19 chr4 3772188 3772349 -198555998 - Charlie8 DNA MER1_type -2184 233 61 971 247 160 9 chr4 3773321 3773665 -198554682 + MSTD LTR MaLR 1 396 0 212 320 102 15 chr4 3774177 3774383 -198553964 - L2 LINE L2 -637 2677 2454 388 344 60 14 chr4 3774880 3775098 -198553249 - MIR SINE MIR -22 240 13 287 287 48 26 chr4 3775933 3776304 -198552043 - L1ME LINE L1 -601 5563 5177 353 343 62 21 chr4 3776424 3776893 -198551454 - L1ME LINE L1 -968 5178 4691 470 294 76 34 chr4 3776896 3777134 -198551213 - L2 LINE L2 0 3313 3066 3843 255 113 40 chr4 3777174 3777651 -198550696 - L1ME2 LINE L1 -1 6163 5722 2162 136 146 11 chr4 3777651 3778027 -198550320 - MSTA LTR MaLR 0 428 2 3843 255 113 40 chr4 3778027 3780077 -198548270 - L1ME2 LINE L1 -442 5722 3443 3550 179 159 90 chr4 3780058 3780594 -198547753 - L1MC3 LINE L1 -3 7782 7285 * 229 322 23 0 chr4 3780594 3780681 -198547666 - MLT1F1 LTR MaLR -442 125 37 3550 179 159 90 chr4 3780681 3781353 -198546994 - L1MC3 LINE L1 -500 7285 6398 420 305 35 6 chr4 3781351 3781525 -198546822 - L1ME2 LINE L1 -2711 3435 3257 * 724 332 47 32 chr4 3781529 3781972 -198546375 - L2 LINE L2 -2152 1162 713 258 267 120 0 chr4 3782114 3782189 -198546158 + MIR SINE MIR 161 244 -18 1716 184 0 28 chr4 3782193 3782513 -198545834 + AluJb SINE Alu 1 311 -1 893 233 76 76 chr4 3782738 3783185 -198545162 - MLT1C LTR MaLR -18 449 3 273 307 50 28 chr4 3783368 3783547 -198544800 + L1ME4a LINE L1 5938 6120 -1 180 0 0 0 chr4 3784387 3784407 -198543940 + (CTG)n Simple_repeat Simple_repeat 1 20 0 516 161 12 43 chr4 3784444 3784606 -198543741 + G-rich Low_complexity Low_complexity 5 161 0 202 310 17 0 chr4 3784668 3784726 -198543621 + (CGGG)n Simple_repeat Simple_repeat 1 59 0 225 208 0 31 chr4 3784824 3784920 -198543427 + (AATTG)n Simple_repeat Simple_repeat 2 94 0 281 276 66 4 chr4 3786649 3786752 -198541595 + MIR SINE MIR 43 148 -60 467 307 67 21 chr4 3787270 3787508 -198540839 + L1MC2 LINE L1 6087 6335 -9 442 223 10 10 chr4 3788376 3788479 -198539868 - MER81 DNA DNA 0 114 12 381 302 71 28 chr4 3788755 3788937 -198539410 + MIR SINE MIR 70 259 -3 243 302 123 12 chr4 3788945 3789128 -198539219 - MIR SINE MIR -38 170 13 264 233 155 39 chr4 3789672 3789775 -198538572 + L2 LINE L2 679 793 -2521 210 342 141 38 chr4 3789989 3790308 -198538039 + L2 LINE L2 2933 3284 -29 197 200 0 0 chr4 3791459 3791499 -198536848 + MIR SINE MIR 107 146 -62 243 0 0 0 chr4 3793242 3793269 -198535078 + (TCCA)n Simple_repeat Simple_repeat 1 27 0 180 217 0 0 chr4 3793321 3793367 -198534980 + (CCCA)n Simple_repeat Simple_repeat 4 49 0 212 235 59 0 chr4 3793765 3793833 -198534514 - L2 LINE L2 -4 3268 3197 298 309 0 19 chr4 3794444 3794562 -198533785 + MIR SINE MIR 33 144 -87 324 292 26 39 chr4 3795754 3795908 -198532439 + L2 LINE L2 3121 3272 0 233 343 86 14 chr4 3796613 3796744 -198531603 - MIR3 SINE MIR -58 150 7 1143 265 60 34 chr4 3796744 3797129 -198531218 + MLT2C1 LTR ERVL 3 397 0 354 301 0 35 chr4 3797389 3797502 -198530845 + MIR SINE MIR 13 121 -141 1616 226 106 47 chr4 3797657 3798147 -198530200 - MLT2B1 LTR ERVL 0 520 2 541 178 11 17 chr4 3798436 3798616 -198529731 + (TG)n Simple_repeat Simple_repeat 1 179 0 602 172 0 32 chr4 3798632 3798818 -198529529 + (TG)n Simple_repeat Simple_repeat 1 180 0 709 153 9 18 chr4 3798841 3799169 -198529178 + (TG)n Simple_repeat Simple_repeat 1 324 0 275 152 0 15 chr4 3799184 3799250 -198529097 + (TG)n Simple_repeat Simple_repeat 1 65 0 430 257 133 9 chr4 3800505 3800782 -198527565 + MLT1C LTR MaLR 47 346 -44 378 301 55 7 chr4 3801424 3801570 -198526777 - L2 LINE L2 -195 3077 2925 525 293 118 84 chr4 3801932 3803568 -198524779 - HAL1 LINE L1 0 2507 816 254 408 25 0 chr4 3803711 3803907 -198524440 + L1MC/D LINE L1 5697 5897 -1911 293 347 48 8 chr4 3806154 3806278 -198522069 + MER5A DNA MER1_type 61 189 0 374 236 39 34 chr4 3806551 3806729 -198521618 + (TGGG)n Simple_repeat Simple_repeat 1 179 0 263 223 62 108 chr4 3807220 3807350 -198520997 - MLT1H LTR MaLR -17 532 421 186 222 0 0 chr4 3807751 3807805 -198520542 + GA-rich Low_complexity Low_complexity 4 57 0 280 338 66 15 chr4 3808693 3808829 -198519518 + MIR SINE MIR 107 249 -13 192 354 18 26 chr4 3809360 3809473 -198518874 - MIR SINE MIR -124 138 27 456 294 47 41 chr4 3809941 3810111 -198518236 - MIR SINE MIR -90 172 2 772 151 0 27 chr4 3810329 3810514 -198517833 + GA-rich Low_complexity Low_complexity 1 180 0 864 141 0 27 chr4 3810529 3810714 -198517633 + (GGGA)n Simple_repeat Simple_repeat 1 180 0 834 164 0 16 chr4 3810708 3810891 -198517456 + GA-rich Low_complexity Low_complexity 1 180 0 * 2556 27 0 0 chr4 3811890 3812187 -198516160 - AluY SINE Alu -14 297 1 252 153 38 99 chr4 3814723 3814854 -198513493 + G-rich Low_complexity Low_complexity 4 126 0 389 188 16 83 chr4 3814874 3815066 -198513281 + G-rich Low_complexity Low_complexity 2 180 0 391 99 25 86 chr4 3815083 3815164 -198513183 + L1MC1 LINE L1 6240 6315 -18 1055 80 0 0 chr4 3815601 3815739 -198512608 + MER85 DNA T2_type 1 138 -1 653 288 40 0 chr4 3817148 3817346 -198511001 + MIR SINE MIR 1 206 -56 239 246 16 0 chr4 3819830 3819891 -198508456 - L2 LINE L2 -70 3243 3182 1643 118 141 0 chr4 3820194 3820457 -198507890 - AluJo SINE Alu -12 300 1 705 295 129 3 chr4 3820689 3821021 -198507326 - HAL1 LINE L1 -628 1879 1506 1196 88 13 0 chr4 3821032 3821191 -198507156 + AluSc SINE Alu 130 290 -19 771 341 156 21 chr4 3821191 3821666 -198506681 - HAL1 LINE L1 -1010 1497 959 190 381 38 19 chr4 3822320 3822480 -198505867 - L2 LINE L2 -564 2750 2588 183 114 0 0 chr4 3822800 3822835 -198505512 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2300 68 0 7 chr4 3822837 3823131 -198505216 - AluY SINE Alu -19 292 1 2116 202 42 13 chr4 3823408 3823859 -198504488 + MLT1C LTR MaLR 2 465 -2 181 292 167 8 chr4 3825079 3825199 -198503148 + MIR3 SINE MIR 12 150 -58 614 302 22 0 chr4 3825742 3825967 -198502380 - MLT1E2 LTR MaLR -17 609 380 977 220 73 32 chr4 3825968 3826281 -198502066 + MLT2D LTR ERVL 5 330 -84 402 57 0 0 chr4 3826282 3826335 -198502012 + (CA)n Simple_repeat Simple_repeat 1 53 0 1040 276 32 34 chr4 3826384 3826764 -198501583 - MLT1E2 LTR MaLR -247 379 1 343 151 82 0 chr4 3827137 3827210 -198501137 - MLT1H LTR MaLR 0 549 471 353 321 18 0 chr4 3827554 3827663 -198500684 + MIR SINE MIR 81 191 -71 493 270 23 23 chr4 3828045 3828219 -198500128 - MLT1K LTR MaLR -21 567 394 331 276 57 0 chr4 3828913 3829036 -198499311 - LTR33 LTR ERVL -308 213 84 330 361 104 17 chr4 3829129 3829359 -198498988 + L1MC4a LINE L1 4422 4671 -1475 371 302 74 18 chr4 3829561 3829948 -198498399 + L1MC4a LINE L1 4909 5306 -840 740 244 14 14 chr4 3829981 3830194 -198498153 - L1MC/D LINE L1 -2294 5514 5302 433 333 165 2 chr4 3830185 3830585 -198497762 + L1MC4a LINE L1 5852 6316 -1492 * 252 0 0 0 chr4 3831194 3831222 -198497125 + (TG)n Simple_repeat Simple_repeat 2 29 0 987 235 20 24 chr4 3831395 3831689 -198496658 + L1MC4 LINE L1 6772 7064 -978 420 176 35 7 chr4 3831755 3831897 -198496450 + (TAGA)n Simple_repeat Simple_repeat 2 147 0 542 325 86 53 chr4 3832187 3832830 -198495517 + L1MC4 LINE L1 7378 8041 -1 202 260 77 39 chr4 3833283 3833387 -198494960 + MER5A DNA MER1_type 7 114 -75 1823 191 91 7 chr4 3833836 3834265 -198494082 - L1MB3 LINE L1 -4 6179 5715 235 254 0 0 chr4 3834814 3834869 -198493478 - L2 LINE L2 -18 3254 3200 312 27 0 0 chr4 3835733 3835770 -198492577 + (TG)n Simple_repeat Simple_repeat 2 38 0 220 310 96 48 chr4 3837635 3837864 -198490483 - L2 LINE L2 -177 3095 2856 222 291 47 12 chr4 3838672 3838758 -198489589 - MIR3 SINE MIR -14 194 106 262 147 35 78 chr4 3838924 3839040 -198489307 + (CCCTAA)n Simple_repeat Simple_repeat 6 116 0 4279 167 12 14 chr4 3839119 3839842 -198488505 + MER72 LTR ERV1 1 722 0 436 239 11 0 chr4 3839860 3839948 -198488399 + L2 LINE L2 3224 3312 -1 622 181 97 68 chr4 3840028 3840249 -198488098 - MLT1B LTR MaLR -25 480 136 1053 139 0 11 chr4 3940272 3940810 -198387537 + (CATTC)n Satellite Satellite 1 532 0 1086 124 0 5 chr4 3940821 3941255 -198387092 + (CATTC)n Satellite Satellite 1 431 0 1110 127 0 0 chr4 3941299 3941659 -198386688 + (CATTC)n Satellite Satellite 1 360 0 306 147 0 0 chr4 3941682 3941750 -198386597 + (CATTC)n Satellite Satellite 2 69 0 1093 129 2 27 chr4 3941891 3942434 -198385913 + (CATTC)n Satellite Satellite 1 529 0 945 131 0 16 chr4 3942464 3942828 -198385519 + (CATTC)n Satellite Satellite 1 359 0 1110 100 0 0 chr4 3942869 3943049 -198385298 + (CATTC)n Satellite Satellite 1 180 0 514 164 0 51 chr4 3943065 3943242 -198385105 + (CATTC)n Satellite Satellite 2 169 0 1068 115 0 0 chr4 3943347 3943611 -198384736 + (CATTC)n Satellite Satellite 1 264 0 927 139 0 0 chr4 3943622 3943802 -198384545 + (CATTC)n Satellite Satellite 1 180 0 781 129 6 6 chr4 3943818 3943981 -198384366 + (CATTC)n Satellite Satellite 2 164 0 1101 105 0 0 chr4 3943993 3944342 -198384005 + (CATTC)n Satellite Satellite 1 349 0 264 30 0 0 chr4 3944353 3944386 -198383961 + (CATTC)n Satellite Satellite 2 34 0 1092 112 0 25 chr4 3944398 3944841 -198383506 + (CATTC)n Satellite Satellite 1 432 0 781 129 6 6 chr4 3944853 3945016 -198383331 + (CATTC)n Satellite Satellite 2 164 0 1044 104 0 4 chr4 3945028 3945258 -198383089 + (CATTC)n Satellite Satellite 2 230 0 1104 130 0 8 chr4 3945277 3945637 -198382710 + (CATTC)n Satellite Satellite 1 358 0 1122 100 0 0 chr4 3945681 3945861 -198382486 + (CATTC)n Satellite Satellite 1 180 0 1068 106 0 0 chr4 3945872 3946051 -198382296 + (CATTC)n Satellite Satellite 2 180 0 1035 146 2 6 chr4 3946072 3946586 -198381761 + (CATTC)n Satellite Satellite 1 511 0 320 43 22 0 chr4 3946691 3946737 -198381610 + (GAATG)n Satellite Satellite 2 48 0 882 131 0 0 chr4 3946749 3946917 -198381430 + (GAATG)n Satellite Satellite 2 169 0 1081 105 4 4 chr4 3946929 3947182 -198381165 + (GAATG)n Satellite Satellite 1 253 0 938 117 0 6 chr4 3947197 3947368 -198380979 + (GAATG)n Satellite Satellite 2 171 0 282 29 0 0 chr4 3947383 3947418 -198380929 + (GAATG)n Satellite Satellite 2 36 0 787 136 6 6 chr4 3947446 3947622 -198380725 + (GAATG)n Satellite Satellite 2 177 0 876 149 0 0 chr4 3947634 3947808 -198380539 + (GAATG)n Satellite Satellite 1 174 0 360 111 0 0 chr4 3947819 3947882 -198380465 + (GAATG)n Satellite Satellite 2 64 0 1311 85 0 5 chr4 3947903 3948452 -198379895 + (GAATG)n Satellite Satellite 2 721 0 390 159 0 0 chr4 3948464 3948552 -198379795 + (GAATG)n Satellite Satellite 2 89 0 1026 132 0 13 chr4 3948568 3949212 -198379135 + (GAATG)n Satellite Satellite 1 813 0 855 111 0 36 chr4 3949340 3949620 -198378727 + (GAATG)n Satellite Satellite 1 269 0 270 132 0 0 chr4 3949631 3949684 -198378663 + (GAATG)n Satellite Satellite 2 54 0 1062 99 0 0 chr4 3949696 3949867 -198378480 + (GAATG)n Satellite Satellite 4 174 0 929 128 0 23 chr4 3949898 3950509 -198377838 + (GAATG)n Satellite Satellite 1 773 0 881 124 0 27 chr4 3950525 3950710 -198377637 + (GAATG)n Satellite Satellite 1 180 0 951 110 0 0 chr4 3950729 3950934 -198377413 + (GAATG)n Satellite Satellite 1 205 0 618 189 0 0 chr4 3950949 3951124 -198377223 + (GAATG)n Satellite Satellite 2 176 0 1026 122 0 0 chr4 3951145 3951325 -198377022 + (GAATG)n Satellite Satellite 1 180 0 954 121 0 0 chr4 3951336 3951544 -198376803 + (GAATG)n Satellite Satellite 1 208 0 1047 112 0 0 chr4 3951560 3951739 -198376608 + (GAATG)n Satellite Satellite 2 180 0 268 169 12 12 chr4 3951751 3951834 -198376513 + (GAATG)n Satellite Satellite 2 84 0 991 106 6 6 chr4 3951845 3952024 -198376323 + (GAATG)n Satellite Satellite 2 180 0 1122 100 0 0 chr4 3952035 3952215 -198376132 + (GAATG)n Satellite Satellite 1 180 0 939 153 0 0 chr4 3952259 3952622 -198375725 + (GAATG)n Satellite Satellite 1 363 0 969 146 0 2 chr4 3952638 3952957 -198375390 + (GAATG)n Satellite Satellite 1 498 0 858 107 0 0 chr4 3952972 3953122 -198375225 + (GAATG)n Satellite Satellite 2 151 0 1140 101 0 0 chr4 3953133 3953311 -198375036 + (GAATG)n Satellite Satellite 3 180 0 261 155 0 0 chr4 3953327 3953385 -198374962 + (GAATG)n Satellite Satellite 4 61 0 1014 121 0 11 chr4 3953403 3953767 -198374580 + (GAATG)n Satellite Satellite 1 538 0 1014 155 0 0 chr4 3953778 3954197 -198374150 + (GAATG)n Satellite Satellite 1 419 0 1132 77 5 5 chr4 3954208 3954417 -198373930 + (GAATG)n Satellite Satellite 1 209 0 1191 81 0 0 chr4 3954428 3954601 -198373746 + (GAATG)n Satellite Satellite 2 174 0 383 170 10 0 chr4 3954614 3954714 -198373633 + (GAATG)n Satellite Satellite 2 102 0 270 284 15 0 chr4 4155307 4155374 -198172973 + MER112 DNA MER1_type 18 85 -175 1502 128 54 0 chr4 4155459 4155701 -198172646 - AluJo SINE Alu -57 255 1 2010 127 0 13 chr4 4155711 4156026 -198172321 - AluSx SINE Alu -1 311 1 1976 123 3 13 chr4 4156038 4156354 -198171993 - AluSq SINE Alu 0 313 1 180 333 78 31 chr4 4157317 4157446 -198170901 + MIR3 SINE MIR 11 145 -63 468 125 14 0 chr4 4158301 4158373 -198169974 - AluS SINE Alu -238 74 2 1926 255 30 11 chr4 4158373 4159369 -198168978 - L1MB3 LINE L1 -351 5832 4818 1940 113 3 3 chr4 4159414 4159715 -198168632 + AluSp SINE Alu 1 301 -12 1102 216 2 121 chr4 4159785 4159992 -198168355 - L1MA4 LINE L1 -170 6130 5900 1482 179 0 4 chr4 4159992 4160272 -198168075 - AluSx SINE Alu -32 280 2 1102 216 2 121 chr4 4160272 4160314 -198168033 - L1MA4 LINE L1 -400 5900 5855 2633 20 0 0 chr4 4160314 4160615 -198167732 + AluY SINE Alu 11 311 0 1102 216 2 121 chr4 4160615 4160777 -198167570 - L1MA4 LINE L1 -445 5855 5767 1973 124 0 31 chr4 4160963 4161286 -198167061 + AluSp SINE Alu 1 313 0 380 228 74 74 chr4 4161429 4161578 -198166769 + MER5B DNA MER1_type 25 173 -5 697 228 46 0 chr4 4161681 4161878 -198166469 - MER6B DNA MER2_type 0 210 5 2224 108 0 6 chr4 4164312 4164627 -198163720 - AluSq SINE Alu 0 313 1 594 233 29 86 chr4 4164694 4164784 -198163563 + L1MEd LINE L1 23 117 -6002 2027 105 11 0 chr4 4164784 4165070 -198163277 + AluSq SINE Alu 1 289 -24 243 0 0 0 chr4 4165075 4165102 -198163245 + (TAAAA)n Simple_repeat Simple_repeat 3 29 0 594 233 29 86 chr4 4165102 4165215 -198163132 + L1MEd LINE L1 121 220 -5899 1102 267 58 47 chr4 4165276 4165513 -198162834 + L1MEd LINE L1 329 575 -5544 2123 86 17 3 chr4 4165513 4165803 -198162544 + AluSq SINE Alu 1 294 -19 1102 267 58 47 chr4 4165803 4166010 -198162337 + L1MEd LINE L1 575 778 -5341 341 247 0 12 chr4 4166094 4166179 -198162168 + MLT1E LTR MaLR 36 119 -474 626 234 0 23 chr4 4166179 4166377 -198161970 - FLAM_C SINE Alu 0 143 2 2063 100 21 0 chr4 4166387 4166676 -198161671 - AluSx SINE Alu -17 295 1 236 263 13 40 chr4 4166684 4166760 -198161587 + MLT1E3 LTR MaLR 12 85 -569 327 277 37 9 chr4 4166775 4166990 -198161357 + MLT1E3 LTR MaLR 193 397 -227 1835 206 101 30 chr4 4166994 4168096 -198160251 - SATR1 Satellite Satellite -20 1179 1 315 211 11 63 chr4 4168172 4168362 -198159985 + (TTA)n Simple_repeat Simple_repeat 1 180 0 2082 206 144 13 chr4 4168476 4169692 -198158655 - SATR1 Satellite Satellite -24 1374 1 2145 192 108 12 chr4 4169730 4170524 -198157823 - SATR1 Satellite Satellite -2 870 1 25057 101 13 14 chr4 4170878 4174665 -198153682 + HERVE LTR ERV1 1108 4945 -2868 2135 204 106 2 chr4 4174671 4175920 -198152427 - SATR1 Satellite Satellite 0 1379 1 2055 155 111 40 chr4 4175937 4176498 -198151849 - SATR1 Satellite Satellite 0 600 1 892 219 286 9 chr4 4176528 4176857 -198151490 - SATR1 Satellite Satellite -3 467 48 1305 101 29 14 chr4 4176861 4177068 -198151279 - AluSq SINE Alu -91 222 13 4057 107 35 2 chr4 4178053 4178688 -198149659 - L1PA5 LINE L1 -32 6122 5467 2086 123 0 3 chr4 4178867 4179169 -198149178 - AluSg SINE Alu -9 301 1 1796 237 24 26 chr4 4179172 4179640 -198148707 - MLT1C LTR MaLR 0 467 1 2674 142 19 54 chr4 4179648 4179773 -198148574 + L1MA8 LINE L1 5719 5847 -444 1678 160 3 35 chr4 4179773 4179915 -198148432 + AluJb SINE Alu 1 146 -166 1984 75 104 4 chr4 4179915 4180195 -198148152 + AluSp SINE Alu 2 309 -4 1678 160 3 35 chr4 4180195 4180365 -198147982 + AluJb SINE Alu 146 303 -9 2674 142 19 54 chr4 4180365 4180760 -198147587 + L1MA8 LINE L1 5847 6221 -70 7558 111 54 11 chr4 4180765 4181921 -198146426 - HSMAR2 DNA Mariner -5 1297 93 309 262 123 41 chr4 4182432 4182554 -198145793 - MIR SINE MIR -7 255 124 760 129 313 0 chr4 4182559 4182706 -198145641 - MER46A DNA MER2_type 0 236 44 198 274 39 0 chr4 4182728 4182779 -198145568 - MIR SINE MIR -165 97 45 23 0 0 0 chr4 4183036 4183059 -198145288 + AT_rich Low_complexity Low_complexity 1 23 0 873 136 8 0 chr4 4183634 4183766 -198144581 + FLAM_A SINE Alu 1 133 0 202 308 70 64 chr4 4183958 4184130 -198144217 - L2 LINE L2 -3061 253 81 1131 183 0 24 chr4 4184931 4185144 -198143203 + AluJo SINE Alu 85 292 -20 1802 149 3 13 chr4 4186242 4186543 -198141804 + AluJb SINE Alu 1 298 -14 271 284 65 7 chr4 4186551 4186706 -198141641 + L1ME4a LINE L1 5956 6119 -2 490 264 87 5 chr4 4186730 4186938 -198141409 + L1MC4a LINE L1 5674 5898 -1910 892 253 80 118 chr4 4186943 4187579 -198140768 + L1ME3A LINE L1 5559 6170 0 2099 104 3 28 chr4 4188286 4188604 -198139743 + AluSp SINE Alu 1 310 -3 544 276 144 0 chr4 4189164 4189338 -198139009 + MIR SINE MIR 13 211 -51 2018 119 3 19 chr4 4189386 4189698 -198138649 - AluSx SINE Alu -5 307 1 380 201 166 14 chr4 4189805 4189944 -198138403 + MER106B DNA MER1_type 865 1024 -35 292 43 109 0 chr4 4189937 4189983 -198138364 - MER106A DNA MER1_type -13 223 173 * 2193 102 0 0 chr4 4190014 4190309 -198138038 - AluSq SINE Alu -18 295 1 212 280 224 28 chr4 4190355 4190462 -198137885 - MER5B DNA MER1_type 0 178 51 2374 41 0 10 chr4 4190581 4190872 -198137475 - AluY SINE Alu -23 288 1 214 358 0 0 chr4 4191250 4191331 -198137016 + MIR SINE MIR 59 139 -69 1847 131 13 23 chr4 4191684 4191989 -198136358 + AluJb SINE Alu 1 302 -10 509 138 0 0 chr4 4193168 4193255 -198135092 - L1MA9 LINE L1 0 6312 6226 1147 135 53 55 chr4 4193266 4193556 -198134791 - L1MA9 LINE L1 -15 6285 6007 191 175 79 79 chr4 4193560 4193623 -198134724 + L2 LINE L2 3202 3264 -8 2039 77 0 58 chr4 4194244 4194554 -198133793 - AluSg SINE Alu -18 292 1 286 236 89 102 chr4 4194596 4194753 -198133594 + MIR3 SINE MIR 36 190 -18 408 268 126 35 chr4 4195186 4195384 -198132963 - L1MC/D LINE L1 -2018 5790 5575 300 266 65 81 chr4 4196505 4196629 -198131718 - L2 LINE L2 -14 3258 3137 181 200 25 0 chr4 4196672 4196712 -198131635 - L2 LINE L2 -1 3271 3231 2060 102 23 0 chr4 4197001 4197304 -198131043 + AluSg SINE Alu 1 310 0 2005 116 9 38 chr4 4197880 4198200 -198130147 + AluSq SINE Alu 1 311 -2 326 289 250 19 chr4 4198344 4198552 -198129795 + MIR SINE MIR 7 262 0 921 253 37 17 chr4 4199144 4199385 -198128962 + MIR SINE MIR 17 262 0 22 0 0 0 chr4 4199423 4199445 -198128902 + AT_rich Low_complexity Low_complexity 1 22 0 363 169 26 39 chr4 4199557 4199634 -198128713 + MIR SINE MIR 187 262 0 1395 80 0 50 chr4 4199805 4200005 -198128342 - AluSc SINE Alu -13 296 107 2507 55 0 0 chr4 4200006 4200313 -198128034 - AluY SINE Alu -4 307 1 312 240 69 98 chr4 4200313 4200517 -198127830 - L1MC/D LINE L1 -515 5606 5409 3111 81 39 9 chr4 4200956 4201348 -198126999 + MLT2A1 LTR ERVL 1 409 -35 318 106 0 0 chr4 4201348 4201395 -198126952 + (TA)n Simple_repeat Simple_repeat 2 48 0 3111 81 39 9 chr4 4201395 4201433 -198126914 + MLT2A1 LTR ERVL 409 444 0 272 197 13 53 chr4 4201445 4201476 -198126871 + (TAA)n Simple_repeat Simple_repeat 2 33 -41 805 153 0 0 chr4 4201476 4201594 -198126753 + FLAM_C SINE Alu 1 118 -15 272 197 13 53 chr4 4201594 4201638 -198126709 + (TAA)n Simple_repeat Simple_repeat 33 74 0 275 311 19 0 chr4 4201791 4201897 -198126450 + LTR16C LTR ERVL 17 124 -367 1994 168 109 26 chr4 4202735 4203017 -198125330 - LTR32 LTR ERVL 0 471 141 180 0 0 0 chr4 4203017 4203037 -198125310 + (CAGGA)n Simple_repeat Simple_repeat 5 24 0 1994 168 109 26 chr4 4203037 4203176 -198125171 - LTR32 LTR ERVL -330 141 15 632 253 104 22 chr4 4203179 4203361 -198124986 + MIR SINE MIR 47 243 -19 380 264 11 0 chr4 4203574 4203661 -198124686 - MIR SINE MIR -60 202 115 2187 104 0 0 chr4 4203937 4204235 -198124112 + AluSx SINE Alu 1 298 -14 648 174 0 3 chr4 4204235 4204350 -198123997 - LTR18A LTR ERVL -6 351 248 715 286 61 5 chr4 4204503 4204699 -198123648 - LTR18A LTR ERVL -147 210 4 398 272 48 48 chr4 4204812 4204959 -198123388 - MER117 DNA MER1_type -49 148 2 3984 99 5 0 chr4 4205176 4205731 -198122616 + L1PA10 LINE L1 5611 6168 0 21 0 0 0 chr4 4206078 4206099 -198122248 + GC_rich Low_complexity Low_complexity 1 21 0 1896 187 118 1 chr4 4206710 4207442 -198120905 - SATR1 Satellite Satellite -2 817 1 35 24 0 0 chr4 4207442 4207484 -198120863 + AT_rich Low_complexity Low_complexity 1 42 0 378 236 11 35 chr4 4207534 4207708 -198120639 + (TAA)n Simple_repeat Simple_repeat 3 172 0 22 35 0 0 chr4 4207755 4207784 -198120563 + AT_rich Low_complexity Low_complexity 1 29 0 1734 203 114 31 chr4 4207830 4208830 -198119517 + SATR1 Satellite Satellite 1 1083 -131 3478 219 16 62 chr4 4209103 4210119 -198118228 - LTR5 LTR ERVK 0 969 1 34 24 0 0 chr4 4210580 4210621 -198117726 + AT_rich Low_complexity Low_complexity 1 41 0 2774 245 24 39 chr4 4210632 4210882 -198117465 - L1MB3 LINE L1 -30 6153 5901 1914 124 36 0 chr4 4210882 4211156 -198117191 - AluSx SINE Alu -17 295 12 2774 245 24 39 chr4 4211156 4211256 -198117091 - L1MB3 LINE L1 -282 5901 5801 230 81 27 0 chr4 4211256 4211293 -198117054 + (TTTG)n Simple_repeat Simple_repeat 1 38 0 1708 178 0 3 chr4 4211295 4211588 -198116759 - AluSx SINE Alu -12 300 9 2774 245 24 39 chr4 4211588 4212589 -198115758 - L1MB3 LINE L1 -383 5800 4818 2109 122 6 3 chr4 4212634 4212946 -198115401 + AluSp SINE Alu 1 313 0 1187 214 18 68 chr4 4213032 4213231 -198115116 - L1MA4 LINE L1 -170 6130 5958 1691 163 3 3 chr4 4213231 4213514 -198114833 - AluSx SINE Alu -29 283 1 1187 214 18 68 chr4 4213514 4213697 -198114650 - L1MA4 LINE L1 -342 5958 5767 282 259 105 35 chr4 4213735 4213878 -198114469 + HsTC2 DNA Tc2 1631 1783 -115 1971 151 0 34 chr4 4213883 4214207 -198114140 + AluSp SINE Alu 1 313 0 309 313 20 14 chr4 4214349 4214496 -198113851 + MER5B DNA MER1_type 25 172 -6 701 230 46 0 chr4 4214600 4214796 -198113551 - MER6B DNA MER2_type -1 209 5 1304 146 27 18 chr4 4216686 4216906 -198111441 + AluSq SINE Alu 1 222 -91 1945 186 119 24 chr4 4216911 4218768 -198109579 + SATR1 Satellite Satellite 1 2035 -62 1683 211 110 27 chr4 4218779 4219347 -198109000 + SATR1 Satellite Satellite 1 615 -20 27241 104 11 10 chr4 4219347 4223402 -198104945 - HERVE LTR ERV1 -2648 5165 1108 239 207 7 64 chr4 4223456 4223596 -198104751 + (TAA)n Simple_repeat Simple_repeat 1 132 0 1819 217 113 12 chr4 4223749 4225505 -198102842 + SATR1 Satellite Satellite 1 1933 -130 25122 108 12 12 chr4 4225512 4229344 -198099003 - HERVE LTR ERV1 -2869 4944 1110 292 219 5 59 chr4 4229407 4229594 -198098753 + (TAA)n Simple_repeat Simple_repeat 2 178 0 22 70 0 0 chr4 4229597 4229640 -198098707 + AT_rich Low_complexity Low_complexity 1 43 0 1404 240 122 40 chr4 4229687 4230679 -198097668 + SATR1 Satellite Satellite 1 1073 -144 554 227 258 2 chr4 4230780 4231056 -198097291 + SATR1 Satellite Satellite 1 346 -144 806 204 251 57 chr4 4231114 4231521 -198096826 + SATR1 Satellite Satellite 1 485 -2 863 235 206 40 chr4 4231541 4232838 -198095509 + SATR1 Satellite Satellite 1 1512 -405 2039 128 7 3 chr4 4234529 4234833 -198093514 + AluSq SINE Alu 1 305 -8 186 276 105 13 chr4 4234926 4235002 -198093345 - L2 LINE L2 -32 3240 3158 1904 103 0 8 chr4 4235256 4235517 -198092830 - AluSg SINE Alu -51 259 1 269 371 48 14 chr4 4235881 4236091 -198092256 + MIR SINE MIR 32 248 -14 34 0 0 0 chr4 4236879 4236913 -198091434 + AT_rich Low_complexity Low_complexity 1 34 0 2867 244 23 32 chr4 4236933 4237180 -198091167 - L1MB3 LINE L1 -32 6151 5903 1984 161 0 0 chr4 4237180 4237485 -198090862 - AluSx SINE Alu -7 305 1 2867 244 23 32 chr4 4237485 4237587 -198090760 - L1MB3 LINE L1 -280 5903 5802 2058 130 3 3 chr4 4237587 4237914 -198090433 - AluSx SINE Alu 0 327 1 2867 244 23 32 chr4 4237914 4238907 -198089440 - L1MB3 LINE L1 -381 5802 4818 2308 104 3 3 chr4 4238952 4239261 -198089086 + AluSp SINE Alu 1 309 -4 1151 199 2 108 chr4 4239340 4239563 -198088784 - L1MA4 LINE L1 -170 6130 5968 1682 187 0 3 chr4 4239563 4239847 -198088500 - AluSx SINE Alu -29 283 1 1151 199 2 108 chr4 4239847 4240030 -198088317 - L1MA4 LINE L1 -332 5968 5767 300 259 101 29 chr4 4240072 4240211 -198088136 + HsTC2 DNA Tc2 1637 1785 -113 2183 108 0 57 chr4 4240216 4240548 -198087799 + AluSp SINE Alu 1 313 0 339 272 88 0 chr4 4240743 4240857 -198087490 + MER5B DNA MER1_type 50 173 -5 320 173 37 12 chr4 4240961 4241042 -198087305 - MER6 DNA MER2_type 0 865 783 221 297 31 0 chr4 4242216 4242280 -198086067 + MER91 DNA MER1_type 125 190 0 1601 203 22 30 chr4 4242442 4242807 -198085540 - MLT1A1 LTR MaLR -3 362 1 739 313 114 16 chr4 4243365 4243863 -198084484 - L1ME3A LINE L1 -208 5962 5416 322 274 10 70 chr4 4244369 4244570 -198083777 + L1ME4a LINE L1 5676 5864 -257 223 320 152 8 chr4 4244604 4244729 -198083618 - MER5A DNA MER1_type -3 186 44 * 380 291 90 8 chr4 4244619 4244753 -198083594 + MER5A DNA MER1_type 37 181 -8 2308 113 0 0 chr4 4244902 4245202 -198083145 + AluSq SINE Alu 1 300 -13 1579 173 40 23 chr4 4245215 4245388 -198082959 - AluJo SINE Alu -7 305 123 216 0 0 0 chr4 4245388 4245412 -198082935 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1579 173 40 23 chr4 4245412 4245538 -198082809 - AluJo SINE Alu -189 123 1 331 214 60 0 chr4 4245580 4245664 -198082683 - MER20 DNA MER1_type -12 207 119 875 234 5 0 chr4 4245689 4245903 -198082444 + L1MA4 LINE L1 6071 6285 -15 33 0 0 0 chr4 4245910 4245943 -198082404 + AT_rich Low_complexity Low_complexity 1 33 0 288 194 32 16 chr4 4245943 4246005 -198082342 - MER20 DNA MER1_type -152 67 5 29 0 0 0 chr4 4246203 4246232 -198082115 + AT_rich Low_complexity Low_complexity 1 29 0 554 297 76 34 chr4 4246264 4246763 -198081584 + L1ME4a LINE L1 5578 6097 -24 239 286 43 0 chr4 4247849 4247919 -198080428 + MIR SINE MIR 117 189 -73 1477 268 90 39 chr4 4248096 4248660 -198079687 + MLT1E LTR MaLR 1 593 0 1764 144 25 9 chr4 4248705 4248778 -198079569 - MER2 DNA MER2_type 0 345 275 2243 114 3 13 chr4 4248778 4249093 -198079254 + AluSx SINE Alu 1 312 0 1764 144 25 9 chr4 4249093 4249338 -198079009 - MER2 DNA MER2_type -70 275 22 1060 293 157 39 chr4 4249340 4250490 -198077857 + L2 LINE L2 2006 3308 -5 225 250 19 0 chr4 4250490 4250542 -198077805 + GA-rich Low_complexity Low_complexity 1 53 0 1402 249 99 43 chr4 4250594 4251107 -198077240 + MLT1H1 LTR MaLR 14 555 0 293 265 20 20 chr4 4251108 4251210 -198077137 + L2 LINE L2 2291 2392 -922 1361 193 68 0 chr4 4251326 4251647 -198076700 + L1MB3 LINE L1 5839 6181 -2 21 26 0 26 chr4 4252476 4252493 -198075854 + AT_rich Low_complexity Low_complexity 1 17 -21 2119 118 0 3 chr4 4252493 4252780 -198075567 + AluSx SINE Alu 1 286 -26 21 26 0 26 chr4 4252780 4252801 -198075546 + AT_rich Low_complexity Low_complexity 17 38 0 248 284 95 14 chr4 4252938 4253012 -198075335 + L2 LINE L2 3188 3267 -5 394 281 98 66 chr4 4253503 4253930 -198074417 + L2 LINE L2 2553 3008 -264 236 105 0 0 chr4 4254018 4254056 -198074291 + MLT1J2 LTR MaLR 72 109 -341 371 308 60 34 chr4 4254076 4254342 -198074005 + MLT1J LTR MaLR 237 509 -2 328 306 96 25 chr4 4254428 4254585 -198073762 + L2 LINE L2 3097 3264 -8 2396 154 16 34 chr4 4254666 4254729 -198073618 + L1PA16 LINE L1 5724 5787 -379 1765 137 10 58 chr4 4254729 4254857 -198073490 + AluJo SINE Alu 6 139 -173 2072 108 0 17 chr4 4254857 4255152 -198073195 + AluSq SINE Alu 1 290 -23 1765 137 10 58 chr4 4255152 4255336 -198073011 + AluJo SINE Alu 139 303 -9 2396 154 16 34 chr4 4255336 4255720 -198072627 + L1PA16 LINE L1 5787 6163 -3 191 88 29 0 chr4 4256958 4256992 -198071355 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 469 248 0 54 chr4 4257011 4257160 -198071187 + L1ME4a LINE L1 5965 6105 -16 2072 103 7 10 chr4 4257496 4257796 -198070551 + AluSx SINE Alu 1 299 -13 351 0 0 0 chr4 4257825 4257864 -198070483 + (GA)n Simple_repeat Simple_repeat 1 39 0 244 277 12 12 chr4 4257870 4257953 -198070394 + L1ME LINE L1 5741 5823 -298 1763 168 3 0 chr4 4257991 4258300 -198070047 - AluJo SINE Alu -2 310 1 243 305 84 0 chr4 4258521 4258616 -198069731 - MER112 DNA MER1_type -131 129 27 1969 69 76 4 chr4 4258803 4259079 -198069268 + AluY SINE Alu 1 296 -15 1480 181 0 22 chr4 4259133 4259448 -198068899 - AluJo SINE Alu -1 311 4 221 224 94 47 chr4 4259543 4259628 -198068719 - MIR3 SINE MIR -7 201 113 * 430 294 87 0 chr4 4259612 4259738 -198068609 + MIR SINE MIR 28 164 -98 2091 117 0 0 chr4 4259740 4260060 -198068287 + AluSg SINE Alu 1 320 0 456 19 0 0 chr4 4260061 4260114 -198068233 + (CA)n Simple_repeat Simple_repeat 2 54 0 515 233 57 62 chr4 4260272 4260448 -198067899 - MIR3 SINE MIR -4 204 30 615 274 65 47 chr4 4261701 4261978 -198066369 + MLT1L LTR MaLR 201 482 -133 187 248 22 146 chr4 4261980 4262117 -198066230 - MIR SINE MIR -141 121 2 213 39 0 0 chr4 4263314 4263340 -198065007 + (TG)n Simple_repeat Simple_repeat 1 26 0 2176 94 3 10 chr4 4263348 4263655 -198064692 - AluSg SINE Alu -5 305 1 281 297 94 23 chr4 4263887 4264015 -198064332 + MER34B LTR ERV1 23 159 -406 553 261 42 50 chr4 4264127 4264368 -198063979 + MER34B LTR ERV1 324 562 -3 225 109 0 109 chr4 4264369 4264415 -198063932 - MIR SINE MIR -115 147 107 260 279 38 0 chr4 4264883 4264962 -198063385 + MER117 DNA MER1_type 59 140 -57 423 280 143 23 chr4 4265281 4265456 -198062891 + MIR SINE MIR 57 252 -10 189 293 35 0 chr4 4265467 4265525 -198062822 - L2 LINE L2 0 3272 3213 235 306 42 0 chr4 4265558 4265630 -198062717 - MIR SINE MIR -10 252 178 397 281 169 47 chr4 4265813 4266133 -198062214 + L1ME4a LINE L1 5747 6105 -16 3059 151 27 23 chr4 4266138 4266322 -198062025 + L1MB2 LINE L1 5606 5788 -383 2559 112 112 109 chr4 4266322 4266984 -198061363 - MER4A LTR ERV1 0 664 1 3059 151 27 23 chr4 4266984 4267363 -198060984 + L1MB2 LINE L1 5788 6171 0 302 328 25 8 chr4 4268035 4268157 -198060190 + L2 LINE L2 2670 2793 -521 668 303 78 18 chr4 4268161 4268379 -198059968 - MIR SINE MIR -9 253 23 1892 176 37 29 chr4 4268904 4269122 -198059225 - MLT1B LTR MaLR -11 379 155 2019 130 7 0 chr4 4269122 4269421 -198058926 + AluSq SINE Alu 1 301 -12 1892 176 37 29 chr4 4269421 4269578 -198058769 - MLT1B LTR MaLR -235 155 1 510 313 72 15 chr4 4269697 4269962 -198058385 - MARNA DNA Mariner -230 356 77 230 271 0 0 chr4 4269973 4270021 -198058326 + MIR SINE MIR 86 133 -75 760 176 0 61 chr4 4270026 4270191 -198058156 + L1MA9 LINE L1 5814 5968 -344 872 163 17 22 chr4 4270191 4270369 -198057978 + FRAM SINE Alu 1 176 0 1393 190 57 10 chr4 4270375 4270675 -198057672 + L1MA9 LINE L1 5959 6272 -40 545 217 34 63 chr4 4270958 4271133 -198057214 + L1MB8 LINE L1 6004 6173 -5 1878 218 35 2 chr4 4271665 4272097 -198056250 + L1MB3 LINE L1 4829 5274 -872 1329 166 16 4 chr4 4272096 4272343 -198056004 - L1MB3 LINE L1 -235 5948 5699 * 4521 157 37 37 chr4 4272344 4272381 -198055966 + L1MB3 LINE L1 5263 5299 -884 1896 132 3 3 chr4 4272381 4272670 -198055677 + AluSq SINE Alu 1 289 -24 4521 157 37 37 chr4 4272670 4273551 -198054796 + L1MB3 LINE L1 5298 6181 -2 546 120 0 0 chr4 4273575 4273650 -198054697 + AluJ/FLAM SINE Alu 3 77 -235 22 56 0 0 chr4 4273673 4273709 -198054638 + AT_rich Low_complexity Low_complexity 1 36 0 248 304 76 0 chr4 4273742 4273821 -198054526 + L2 LINE L2 3168 3252 -20 1973 108 11 3 chr4 4273953 4274240 -198054107 + AluSp SINE Alu 1 289 -24 392 182 3 85 chr4 4274245 4274366 -198053981 + L1MD3 LINE L1 7660 7789 -206 1917 141 0 16 chr4 4274366 4274672 -198053675 - AluSx SINE Alu -11 301 1 392 182 3 85 chr4 4274672 4274691 -198053656 + L1MD3 LINE L1 7789 7995 0 1014 199 16 0 chr4 4275444 4275630 -198052717 - MER5A DNA MER1_type 0 189 1 230 328 0 0 chr4 4275758 4275819 -198052528 - L2 LINE L2 -2 3311 3251 326 292 76 7 chr4 4275901 4276045 -198052302 + HAL1b LINE L1 397 550 -798 723 240 35 58 chr4 4276072 4276330 -198052017 - L2 LINE L2 -4 3309 3058 2122 115 0 0 chr4 4276683 4276979 -198051368 + AluSx SINE Alu 1 296 -16 2022 122 3 3 chr4 4277219 4277515 -198050832 + AluSq SINE Alu 1 296 -17 611 271 101 95 chr4 4277561 4277994 -198050353 + L1MEc LINE L1 2105 2489 -3726 2232 52 21 7 chr4 4277994 4278283 -198050064 + AluY SINE Alu 2 294 -17 611 271 101 95 chr4 4278283 4278327 -198050020 + L1MEc LINE L1 2489 2531 -3684 243 170 0 0 chr4 4278345 4278392 -198049955 + (TA)n Simple_repeat Simple_repeat 1 47 0 226 292 0 0 chr4 4278393 4278482 -198049865 - L1MC4 LINE L1 -1340 6702 6614 302 341 0 0 chr4 4278482 4278564 -198049783 + L1MC4 LINE L1 6622 6703 -1339 * 382 272 0 22 chr4 4278516 4278608 -198049739 - L1MC4 LINE L1 -1339 6703 6614 * 394 300 0 0 chr4 4278576 4278666 -198049681 + L1MC4 LINE L1 6614 6703 -1339 837 121 0 0 chr4 4278667 4278791 -198049556 - AluSp/q SINE Alu -14 299 176 346 327 119 0 chr4 4278837 4279005 -198049342 + L1MEc LINE L1 2627 2814 -3401 795 226 40 32 chr4 4279007 4279239 -198049108 + MIR SINE MIR 23 261 -1 382 340 47 0 chr4 4279417 4279567 -198048780 - L3 LINE CR1 -15 1562 1406 938 116 0 0 chr4 4279580 4279785 -198048562 - AluSx SINE Alu 0 356 152 1062 159 0 53 chr4 4279788 4280014 -198048333 + AluJo SINE Alu 97 310 -2 259 286 132 22 chr4 4280204 4280295 -198048052 + L2 LINE L2 3164 3264 -49 1123 75 20 0 chr4 4280327 4280474 -198047873 - AluSx SINE Alu -162 150 1 210 118 0 0 chr4 4280569 4280603 -198047744 + (TCCA)n Simple_repeat Simple_repeat 1 34 0 470 304 120 0 chr4 4280614 4280805 -198047542 - L2 LINE L2 0 3313 3100 185 244 0 0 chr4 4281065 4281106 -198047241 - L3 LINE CR1 -582 995 955 214 310 86 52 chr4 4281117 4281291 -198047056 - L3 LINE CR1 -1133 444 265 199 239 0 22 chr4 4281531 4281577 -198046770 - MIR SINE MIR -63 145 101 332 278 18 71 chr4 4281741 4281910 -198046437 + L2 LINE L2 2305 2464 -850 360 64 0 0 chr4 4281945 4281992 -198046355 + (TGGA)n Simple_repeat Simple_repeat 4 50 0 282 56 0 0 chr4 4282109 4282145 -198046202 + (GGAGAA)n Simple_repeat Simple_repeat 5 40 0 1870 119 44 10 chr4 4282164 4282459 -198045888 + AluSx SINE Alu 1 305 -7 210 145 0 48 chr4 4282469 4282531 -198045816 + (GGGAGA)n Simple_repeat Simple_repeat 3 61 0 * 310 200 24 41 chr4 4282525 4282613 -198045734 + GA-rich Low_complexity Low_complexity 1 86 -81 2267 102 0 0 chr4 4282613 4282918 -198045429 + AluSg SINE Alu 1 305 -5 310 200 24 41 chr4 4282918 4282999 -198045348 + GA-rich Low_complexity Low_complexity 86 167 0 292 227 19 143 chr4 4283509 4283664 -198044683 - MIR SINE MIR -44 164 28 1518 190 13 3 chr4 4283825 4284125 -198044222 + AluJo SINE Alu 1 303 -9 220 240 29 29 chr4 4285806 4285910 -198042437 + (CCCG)n Simple_repeat Simple_repeat 2 105 0 562 204 68 34 chr4 4286726 4286873 -198041474 + MER45A DNA AcHobo 27 178 0 300 257 83 76 chr4 4286962 4287106 -198041241 - L2 LINE L2 0 3313 3169 198 0 0 0 chr4 4287298 4287320 -198041027 + (TTTC)n Simple_repeat Simple_repeat 2 23 0 1610 155 7 40 chr4 4287322 4287626 -198040721 - AluJo SINE Alu -18 294 1 506 240 154 0 chr4 4287761 4287936 -198040411 + MLT1J1 LTR MaLR 238 439 -7 1870 112 14 11 chr4 4288046 4288331 -198040016 - AluSg SINE Alu -24 286 1 1880 93 17 42 chr4 4288426 4288715 -198039632 + AluSx SINE Alu 21 302 -10 5418 50 19 0 chr4 4289063 4289738 -198038609 - L1PA5 LINE L1 0 6154 5467 1551 118 0 65 chr4 4289920 4290242 -198038105 - AluSg SINE Alu -9 301 1 1796 237 24 26 chr4 4290245 4290713 -198037634 - MLT1C LTR MaLR 0 467 1 2674 142 19 54 chr4 4290721 4290846 -198037501 + L1MA8 LINE L1 5719 5847 -444 1666 159 3 41 chr4 4290846 4290990 -198037357 + AluJb SINE Alu 1 149 -163 1976 78 103 4 chr4 4290990 4291271 -198037076 + AluSp SINE Alu 2 310 -3 1666 159 3 41 chr4 4291271 4291441 -198036906 + AluJb SINE Alu 149 303 -9 2674 142 19 54 chr4 4291441 4291836 -198036511 + L1MA8 LINE L1 5847 6221 -70 7558 111 54 11 chr4 4291841 4292997 -198035350 - HSMAR2 DNA Mariner -5 1297 93 309 262 123 41 chr4 4293510 4293632 -198034715 - MIR SINE MIR -7 255 124 760 129 313 0 chr4 4293637 4293784 -198034563 - MER46A DNA MER2_type 0 236 44 198 274 39 0 chr4 4293806 4293857 -198034490 - MIR SINE MIR -165 97 45 23 0 0 0 chr4 4294114 4294137 -198034210 + AT_rich Low_complexity Low_complexity 1 23 0 873 136 8 0 chr4 4294712 4294844 -198033503 + FLAM_A SINE Alu 1 133 0 212 331 58 52 chr4 4295035 4295207 -198033140 - L2 LINE L2 -3061 253 81 1131 183 0 24 chr4 4296008 4296221 -198032126 + AluJo SINE Alu 85 292 -20 1817 146 3 13 chr4 4297319 4297620 -198030727 + AluJb SINE Alu 1 298 -14 375 297 65 7 chr4 4297628 4297783 -198030564 + L1ME4a LINE L1 5956 6119 -2 357 282 35 7 chr4 4297872 4298014 -198030333 + L1MC4a LINE L1 5753 5898 -1910 892 253 80 118 chr4 4298019 4298655 -198029692 + L1ME3A LINE L1 5559 6170 0 2085 107 3 28 chr4 4299362 4299680 -198028667 + AluSp SINE Alu 1 310 -3 544 276 144 0 chr4 4300240 4300414 -198027933 + MIR SINE MIR 13 211 -51 2018 119 3 19 chr4 4300462 4300774 -198027573 - AluSx SINE Alu -5 307 1 380 201 166 14 chr4 4300881 4301020 -198027327 + MER106B DNA MER1_type 865 1024 -35 292 43 109 0 chr4 4301013 4301059 -198027288 - MER106A DNA MER1_type -13 223 173 * 2207 98 0 0 chr4 4301090 4301385 -198026962 - AluSq SINE Alu -18 295 1 226 271 224 28 chr4 4301431 4301538 -198026809 - MER5B DNA MER1_type 0 178 51 2362 45 0 10 chr4 4301657 4301948 -198026399 - AluY SINE Alu -23 288 1 193 294 0 0 chr4 4302326 4302377 -198025970 + MIR SINE MIR 59 109 -99 1847 131 13 23 chr4 4302760 4303065 -198025282 + AluJb SINE Alu 1 302 -10 516 126 0 0 chr4 4304244 4304331 -198024016 - L1MA9 LINE L1 0 6312 6226 1147 135 53 55 chr4 4304342 4304632 -198023715 - L1MA9 LINE L1 -15 6285 6007 191 175 79 79 chr4 4304636 4304699 -198023648 + L2 LINE L2 3202 3264 -8 2039 77 0 58 chr4 4305320 4305630 -198022717 - AluSg SINE Alu -18 292 1 286 236 89 102 chr4 4305672 4305829 -198022518 + MIR3 SINE MIR 36 190 -18 362 279 127 35 chr4 4306263 4306460 -198021887 - L1MC/D LINE L1 -2018 5790 5576 300 266 65 81 chr4 4307582 4307706 -198020641 - L2 LINE L2 -14 3258 3137 181 200 25 0 chr4 4307749 4307789 -198020558 - L2 LINE L2 -1 3271 3231 2033 106 23 0 chr4 4308078 4308381 -198019966 + AluSg SINE Alu 1 310 0 186 103 0 0 chr4 4308503 4308532 -198019815 + (T)n Simple_repeat Simple_repeat 1 29 0 2050 114 3 43 chr4 4308958 4309282 -198019065 + AluSq SINE Alu 1 311 -2 326 289 250 19 chr4 4309426 4309634 -198018713 + MIR SINE MIR 7 262 0 921 253 37 17 chr4 4310226 4310467 -198017880 + MIR SINE MIR 17 262 0 22 0 0 0 chr4 4310505 4310527 -198017820 + AT_rich Low_complexity Low_complexity 1 22 0 363 169 26 39 chr4 4310639 4310716 -198017631 + MIR SINE MIR 187 262 0 1403 80 0 50 chr4 4310887 4311088 -198017259 - AluSc SINE Alu -12 297 107 2625 36 0 0 chr4 4311089 4311398 -198016949 - AluY SINE Alu -2 309 1 312 240 69 98 chr4 4311398 4311602 -198016745 - L1MC/D LINE L1 -515 5606 5409 3098 77 47 12 chr4 4312041 4312433 -198015914 + MLT2A1 LTR ERVL 1 411 -33 441 95 0 0 chr4 4312433 4312496 -198015851 + (TA)n Simple_repeat Simple_repeat 1 63 0 3098 77 47 12 chr4 4312496 4312532 -198015815 + MLT2A1 LTR ERVL 411 444 0 779 161 0 0 chr4 4312575 4312693 -198015654 + FLAM_C SINE Alu 1 118 -15 198 103 0 0 chr4 4312696 4312725 -198015622 + (TAA)n Simple_repeat Simple_repeat 3 31 0 275 311 19 0 chr4 4312896 4313002 -198015345 + LTR16C LTR ERVL 17 124 -367 2155 168 73 36 chr4 4313840 4314281 -198014066 - LTR32 LTR ERVL 0 471 15 632 253 104 22 chr4 4314284 4314466 -198013881 + MIR SINE MIR 47 243 -19 380 264 11 0 chr4 4314679 4314766 -198013581 - MIR SINE MIR -60 202 115 2172 107 0 0 chr4 4315042 4315340 -198013007 + AluSx SINE Alu 1 298 -14 648 174 0 3 chr4 4315340 4315455 -198012892 - LTR18A LTR ERVL -6 351 248 703 291 61 5 chr4 4315608 4315804 -198012543 - LTR18A LTR ERVL -147 210 4 398 272 48 48 chr4 4315917 4316064 -198012283 - MER117 DNA MER1_type -49 148 2 3973 99 5 0 chr4 4316281 4316836 -198011511 + L1PA10 LINE L1 5611 6168 0 2116 113 7 0 chr4 4316924 4317234 -198011113 + AluSp SINE Alu 2 313 0 2231 100 7 0 chr4 4317427 4317737 -198010610 + AluSx SINE Alu 1 312 0 285 291 75 15 chr4 4318921 4319055 -198009292 + L1ME3A LINE L1 5524 5665 -497 225 0 0 0 chr4 4319139 4319164 -198009183 + (ATTG)n Simple_repeat Simple_repeat 4 28 0 2097 100 0 0 chr4 4319164 4319444 -198008903 - AluSx SINE Alu -32 280 1 1648 152 0 55 chr4 4319444 4319754 -198008593 - AluJo SINE Alu -14 298 6 554 219 34 0 chr4 4319783 4319902 -198008445 + L1ME3A LINE L1 5850 5972 -198 245 189 344 0 chr4 4319909 4319999 -198008348 + L1ME3A LINE L1 6042 6162 -8 210 289 0 106 chr4 4320375 4320479 -198007868 - MIR SINE MIR -132 130 38 197 33 33 0 chr4 4320958 4320988 -198007359 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1534 133 47 36 chr4 4320990 4321268 -198007079 - AluJo SINE Alu -23 289 9 2373 74 0 3 chr4 4321336 4321648 -198006699 + AluY SINE Alu 1 311 0 2092 92 3 3 chr4 4322410 4322750 -198005597 - AluSp SINE Alu 0 340 1 2142 117 10 0 chr4 4323046 4323355 -198004992 - AluSx SINE Alu 0 312 1 2465 102 36 28 chr4 4324318 4324679 -198003668 + THE1B LTR MaLR 1 364 0 336 298 258 25 chr4 4324974 4325172 -198003175 - MIR SINE MIR -9 253 10 1875 124 34 0 chr4 4325894 4326185 -198002162 + AluSx SINE Alu 1 301 -11 21 0 0 0 chr4 4327248 4327269 -198001078 + AT_rich Low_complexity Low_complexity 1 21 0 2284 198 77 73 chr4 4327652 4328409 -197999938 + L1MD1 LINE L1 14 5423 -1117 732 190 28 0 chr4 4328423 4328565 -197999782 + L1MA9 LINE L1 6108 6253 -59 1414 178 69 4 chr4 4328565 4328841 -197999506 + AluJo SINE Alu 1 294 -18 180 0 0 0 chr4 4328897 4328917 -197999430 + (A)n Simple_repeat Simple_repeat 1 20 0 3777 191 51 72 chr4 4328937 4329510 -197998837 + L1MD1 LINE L1 5437 6020 -616 5536 101 25 6 chr4 4329510 4330313 -197998034 - L1MA2 LINE L1 0 6304 5487 3777 191 51 72 chr4 4330313 4330950 -197997397 + L1MD1 LINE L1 6020 6628 -8 1445 125 32 39 chr4 4330974 4331255 -197997092 - Tigger7 DNA MER2_type 0 2487 2209 557 163 0 0 chr4 4331263 4331349 -197996998 - Tigger7 DNA MER2_type -387 163 78 535 236 0 0 chr4 4332072 4332182 -197996165 - FRAM SINE Alu -67 109 1 2068 122 0 0 chr4 4332583 4332887 -197995460 + AluSx SINE Alu 1 304 -8 182 204 0 19 chr4 4333225 4333279 -197995068 + CT-rich Low_complexity Low_complexity 3 55 0 504 309 52 14 chr4 4333748 4333960 -197994387 + MIR SINE MIR 21 248 -14 906 188 14 29 chr4 4334078 4334286 -197994061 - AluJb SINE Alu -9 303 99 2140 110 0 0 chr4 4334350 4334640 -197993707 - AluSx SINE Alu -22 290 1 195 264 75 0 chr4 4334868 4334921 -197993426 + MIR SINE MIR 50 106 -156 1001 90 0 0 chr4 4335075 4335209 -197993138 + AluSp/q SINE Alu 171 304 -9 2079 114 0 3 chr4 4335220 4335517 -197992830 + AluSx SINE Alu 1 296 -16 2091 112 0 0 chr4 4335705 4335990 -197992357 - AluSx SINE Alu -24 288 4 180 332 127 9 chr4 4336189 4336418 -197991929 + L2 LINE L2 2999 3254 -59 235 200 52 13 chr4 4337255 4337370 -197990977 + L2 LINE L2 3101 3272 0 * 486 265 15 22 chr4 4337369 4337505 -197990842 - MIR SINE MIR -108 154 20 1877 137 3 29 chr4 4337689 4338002 -197990345 + AluSx SINE Alu 1 305 -7 2885 179 39 20 chr4 4338549 4339193 -197989154 + L1 LINE L1 4104 4759 -1387 2020 95 51 3 chr4 4339971 4340267 -197988080 - AluSg SINE Alu 0 310 1 2043 93 0 0 chr4 4341827 4342097 -197986250 - AluSg SINE Alu -40 270 1 1065 221 55 0 chr4 4342618 4342835 -197985512 - MIR SINE MIR -3 259 31 2326 63 3 16 chr4 4345295 4345610 -197982737 - AluY SINE Alu 0 311 1 299 267 110 20 chr4 4346195 4346341 -197982006 - MIR SINE MIR -60 202 44 195 297 144 8 chr4 4346742 4346860 -197981487 + MIR SINE MIR 79 212 -50 2223 111 0 0 chr4 4347136 4347443 -197980904 - AluSx SINE Alu -5 307 1 264 291 36 45 chr4 4347572 4347682 -197980665 + MIR3 SINE MIR 85 193 -15 306 244 39 0 chr4 4347806 4347884 -197980463 - MIR SINE MIR -70 192 112 249 197 14 113 chr4 4347948 4348019 -197980328 - L2 LINE L2 -20 3252 3189 653 253 96 35 chr4 4348117 4348346 -197980001 - MIR SINE MIR -8 254 12 454 143 220 0 chr4 4348438 4348529 -197979818 + MER81 DNA DNA 4 114 0 553 260 33 20 chr4 4349464 4349614 -197978733 + MIR SINE MIR 108 259 -3 302 211 14 56 chr4 4349612 4349683 -197978664 + L2 LINE L2 3246 3313 0 * 1877 140 31 63 chr4 4349800 4350151 -197978196 - MLT1B LTR MaLR 0 390 51 208 290 122 19 chr4 4350377 4350484 -197977863 + L2 LINE L2 2965 3082 -190 882 97 0 62 chr4 4350505 4350649 -197977698 + AluSc SINE Alu 1 135 -174 1962 122 0 26 chr4 4350650 4350953 -197977394 + AluSx SINE Alu 4 298 -14 354 282 154 26 chr4 4350979 4351096 -197977251 + L2 LINE L2 3139 3270 -2 359 155 19 126 chr4 4351668 4351771 -197976576 - MIR3 SINE MIR -5 203 112 443 289 10 0 chr4 4351773 4351877 -197976470 - L2 LINE L2 -2 3270 3166 294 172 11 151 chr4 4352087 4352180 -197976167 + MIR SINE MIR 11 90 -172 929 241 49 0 chr4 4352194 4352397 -197975950 - MLT1H1 LTR MaLR 0 555 343 539 292 82 18 chr4 4352438 4352657 -197975690 - MLT1H1 LTR MaLR -316 239 7 581 177 161 0 chr4 4352665 4352789 -197975558 + MIR SINE MIR 118 261 -1 1956 123 7 0 chr4 4353027 4353311 -197975036 - AluSx SINE Alu -26 286 1 465 19 0 0 chr4 4353529 4353583 -197974764 + (TG)n Simple_repeat Simple_repeat 2 55 0 520 304 117 26 chr4 4353607 4353784 -197974563 + MIR SINE MIR 6 210 -52 1748 146 80 50 chr4 4353784 4354148 -197974199 - THE1C LTR MaLR 0 375 1 520 304 117 26 chr4 4354148 4354200 -197974147 + MIR SINE MIR 210 256 -6 2306 126 27 36 chr4 4354965 4355330 -197973017 + THE1B LTR MaLR 3 364 0 2150 113 3 0 chr4 4355724 4356035 -197972312 - AluSx SINE Alu 0 312 1 1570 188 41 3 chr4 4356168 4356460 -197971887 + AluJo SINE Alu 1 303 -9 342 250 86 17 chr4 4356595 4356711 -197971636 + MER5A DNA MER1_type 38 161 -28 396 255 301 0 chr4 4356720 4356873 -197971474 - MIR SINE MIR -15 247 49 1816 149 3 14 chr4 4357095 4357384 -197970963 - AluJb SINE Alu -21 291 6 375 220 120 10 chr4 4357566 4357666 -197970681 + L2 LINE L2 3171 3281 -32 438 247 320 1 chr4 4357712 4357952 -197970395 + L2 LINE L2 2745 3045 -268 22 0 0 0 chr4 4358166 4358188 -197970159 + AT_rich Low_complexity Low_complexity 1 22 0 690 190 71 11 chr4 4358248 4358409 -197969938 - MER3 DNA MER1_type -65 144 5 378 0 0 0 chr4 4358437 4358479 -197969868 + (TG)n Simple_repeat Simple_repeat 1 42 0 25 0 0 0 chr4 4359262 4359287 -197969060 + AT_rich Low_complexity Low_complexity 1 25 0 922 140 0 0 chr4 4359323 4359466 -197968881 + FRAM SINE Alu 22 164 -12 249 140 0 0 chr4 4362395 4362452 -197965895 + (TC)n Simple_repeat Simple_repeat 2 58 0 2120 99 27 0 chr4 4362896 4363189 -197965158 - AluSx SINE Alu -11 301 1 732 241 141 0 chr4 4363338 4363529 -197964818 + Charlie1 DNA MER1_type 2 219 -2542 732 190 36 0 chr4 4363523 4363660 -197964687 + Charlie1 DNA MER1_type 2620 2761 0 42 20 0 0 chr4 4363815 4363864 -197964483 + AT_rich Low_complexity Low_complexity 1 49 0 213 290 43 0 chr4 4365343 4365412 -197962935 - L2 LINE L2 0 3272 3201 883 226 49 25 chr4 4366032 4366275 -197962072 + MIR SINE MIR 2 250 -12 309 248 34 39 chr4 4366427 4366530 -197961817 + MIR SINE MIR 87 191 -62 417 206 46 122 chr4 4366685 4366753 -197961594 - MER5B DNA MER1_type -55 123 51 207 0 0 0 chr4 4366753 4366776 -197961571 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2006 104 0 4 chr4 4366778 4367057 -197961290 - AluSg SINE Alu -32 278 1 417 206 46 122 chr4 4367057 4367116 -197961231 - MER5B DNA MER1_type -128 50 3 197 311 22 11 chr4 4368188 4368278 -197960069 + L3 LINE CR1 1268 1358 -219 503 308 92 25 chr4 4368938 4369178 -197959169 + MIR SINE MIR 7 262 0 2347 65 0 32 chr4 4369192 4369502 -197958845 - AluY SINE Alu -11 300 1 245 167 0 0 chr4 4372479 4372521 -197955826 + MER94 DNA DNA 70 111 -23 255 330 126 10 chr4 4372572 4372675 -197955672 - L2 LINE L2 -2 3270 3156 2040 129 0 3 chr4 4373053 4373362 -197954985 - AluSx SINE Alu -4 308 1 385 304 50 12 chr4 4373491 4373652 -197954695 + MIR SINE MIR 90 256 -6 289 363 40 0 chr4 4374810 4374934 -197953413 - L2 LINE L2 -3 3269 3141 769 143 75 8 chr4 4375589 4375722 -197952625 + AluSg/x SINE Alu 144 285 -27 1394 180 54 14 chr4 4376012 4376306 -197952041 - L1MB7 LINE L1 -9 6175 5870 309 194 16 0 chr4 4376311 4376373 -197951974 - L1MB7 LINE L1 -473 5705 5643 2091 107 30 3 chr4 4377024 4377324 -197951023 + AluSx SINE Alu 1 308 -4 1811 152 16 10 chr4 4377573 4377883 -197950464 - AluJo SINE Alu 0 312 1 1563 147 15 4 chr4 4378229 4378488 -197949859 + AluSx SINE Alu 1 262 -50 1571 117 0 25 chr4 4378494 4378733 -197949614 + AluSq SINE Alu 29 261 -52 842 168 173 11 chr4 4379130 4379309 -197949038 + AluJo SINE Alu 85 292 -20 195 293 103 60 chr4 4380602 4380718 -197947629 + MIR SINE MIR 31 151 -111 683 279 202 70 chr4 4381575 4381657 -197946690 + L2 LINE L2 1334 1404 -1910 1998 116 36 0 chr4 4381657 4381958 -197946389 + AluSx SINE Alu 1 312 0 683 279 202 70 chr4 4381958 4382164 -197946183 + L2 LINE L2 1404 1581 -1733 936 118 0 22 chr4 4382164 4382300 -197946047 - FLAM_C SINE Alu 0 133 1 683 279 202 70 chr4 4382300 4382795 -197945552 + L2 LINE L2 1581 2009 -1305 3304 136 84 4 chr4 4382795 4383332 -197945015 + LTR19B LTR ERV1 1 580 0 683 279 202 70 chr4 4383332 4383551 -197944796 + L2 LINE L2 2009 2471 -843 1920 130 24 0 chr4 4383723 4384016 -197944331 + AluSg SINE Alu 1 300 -10 246 337 74 0 chr4 4384282 4384377 -197943970 + MIR SINE MIR 38 139 -69 186 259 0 56 chr4 4384528 4384582 -197943765 - MIR3 SINE MIR -7 201 151 301 289 141 15 chr4 4384600 4384735 -197943612 - MER5A DNA MER1_type -29 160 9 189 226 226 0 chr4 4384743 4384796 -197943551 - MIR3 SINE MIR -48 160 96 461 287 71 10 chr4 4384804 4385004 -197943343 - MIR SINE MIR 0 262 48 1523 168 10 24 chr4 4385178 4385469 -197942878 - AluJb SINE Alu -25 287 1 859 133 0 0 chr4 4385479 4385607 -197942740 - FLAM_C SINE Alu -15 128 1 216 0 0 0 chr4 4385834 4385858 -197942489 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1956 53 3 86 chr4 4385861 4386164 -197942183 - AluY SINE Alu -32 279 2 830 174 25 0 chr4 4386808 4386969 -197941378 + L1MB7 LINE L1 5910 6074 -110 1029 214 68 80 chr4 4386969 4387306 -197941041 + MLT1B LTR MaLR 1 359 -108 1431 191 37 0 chr4 4387306 4387578 -197940769 - AluJo SINE Alu -30 282 1 1029 214 68 80 chr4 4387578 4387683 -197940664 + MLT1B LTR MaLR 359 464 -3 677 153 0 0 chr4 4387683 4387794 -197940553 + L1MB4 LINE L1 6067 6177 -3 210 186 0 47 chr4 4387809 4387852 -197940495 + MIR SINE MIR 154 194 -68 1233 116 0 0 chr4 4388033 4388206 -197940141 - AluSg/x SINE Alu -7 305 133 319 248 152 16 chr4 4388357 4388482 -197939865 + MIR SINE MIR 85 226 -36 282 363 18 9 chr4 4388531 4388644 -197939703 + L2 LINE L2 3197 3310 -3 2357 176 19 26 chr4 4388740 4389141 -197939206 + MLT1C LTR MaLR 1 400 -67 2326 75 0 0 chr4 4389141 4389435 -197938912 - AluY SINE Alu -17 294 1 2357 176 19 26 chr4 4389435 4389500 -197938847 + MLT1C LTR MaLR 400 464 -3 804 203 49 93 chr4 4390486 4390732 -197937615 + MLT1B LTR MaLR 1 235 -155 * 1310 194 113 76 chr4 4390731 4390907 -197937440 + MLT1C LTR MaLR 18 186 -281 1485 181 41 0 chr4 4390907 4391178 -197937169 - AluJo SINE Alu -28 284 3 1310 194 113 76 chr4 4391178 4391435 -197936912 + MLT1C LTR MaLR 186 467 0 1852 139 31 0 chr4 4391723 4392011 -197936336 + AluSq SINE Alu 1 297 -16 225 281 31 0 chr4 4392319 4392383 -197935964 + MIR SINE MIR 65 130 -78 1769 126 7 25 chr4 4392417 4392703 -197935644 + AluJb SINE Alu 7 287 -25 765 221 0 54 chr4 4393235 4393421 -197934926 + L1M3 LINE L1 5429 5596 -575 7168 102 18 11 chr4 4393426 4394426 -197933921 - LTR13 LTR ERVK 0 1007 1 2196 119 0 0 chr4 4394451 4394762 -197933585 + AluSx SINE Alu 1 311 -1 1383 93 31 0 chr4 4394800 4394994 -197933353 + AluSq SINE Alu 1 200 -113 25 51 0 0 chr4 4395001 4395040 -197933307 + AT_rich Low_complexity Low_complexity 1 39 0 1403 145 0 0 chr4 4395076 4395290 -197933057 - AluSg/x SINE Alu -16 296 83 451 226 0 0 chr4 4395495 4395579 -197932768 - PABL_B-int LTR ERV1 -449 6673 6590 1948 179 21 6 chr4 4395582 4395912 -197932435 + LTR32 LTR ERVL 14 348 -123 2128 112 3 0 chr4 4395915 4396211 -197932136 - AluSp SINE Alu -16 297 1 810 172 26 13 chr4 4396234 4396385 -197931962 + LTR32 LTR ERVL 319 471 0 690 335 37 41 chr4 4396451 4396964 -197931383 - PABL_B-int LTR ERV1 -598 6524 6014 2253 101 0 0 chr4 4397037 4397345 -197931002 + AluSg SINE Alu 1 308 -2 557 215 178 0 chr4 4397345 4397592 -197930755 + LTR23-int LTR ERV1 2089 2379 -2744 2656 202 88 102 chr4 4397612 4397648 -197930699 + LTR23-int LTR ERV1 3421 3456 -2490 2107 107 0 7 chr4 4397648 4397947 -197930400 + AluSx SINE Alu 1 297 -15 2656 202 88 102 chr4 4397947 4398915 -197929432 + LTR23-int LTR ERV1 3456 4410 -1536 1389 273 37 24 chr4 4399026 4399241 -197929106 + MLT1D LTR MaLR 35 246 -259 2253 116 0 0 chr4 4399241 4399551 -197928796 + AluSx SINE Alu 1 310 -2 1389 273 37 24 chr4 4399551 4399800 -197928547 + MLT1D LTR MaLR 246 505 0 655 295 127 45 chr4 4399800 4400262 -197928085 - MLT1J LTR MaLR -7 504 5 2012 130 0 13 chr4 4400503 4400859 -197927488 - AluSx SINE Alu 0 352 1 1614 127 15 8 chr4 4401229 4401488 -197926859 - MER2 DNA MER2_type -63 282 22 1037 291 158 38 chr4 4401490 4402638 -197925709 + L2 LINE L2 2006 3308 -5 225 250 19 0 chr4 4402638 4402690 -197925657 + GA-rich Low_complexity Low_complexity 1 53 0 1542 246 99 43 chr4 4402742 4403255 -197925092 + MLT1H1 LTR MaLR 14 555 0 281 265 20 20 chr4 4403256 4403358 -197924989 + L2 LINE L2 2291 2392 -922 1441 196 68 0 chr4 4403474 4403795 -197924552 + L1MB3 LINE L1 5839 6181 -2 21 26 0 26 chr4 4404625 4404642 -197923705 + AT_rich Low_complexity Low_complexity 1 17 -21 2111 122 0 3 chr4 4404642 4404929 -197923418 + AluSx SINE Alu 1 286 -26 21 26 0 26 chr4 4404929 4404950 -197923397 + AT_rich Low_complexity Low_complexity 17 38 0 237 284 95 14 chr4 4405087 4405161 -197923186 + L2 LINE L2 3188 3267 -5 326 302 93 61 chr4 4405652 4406079 -197922268 + L2 LINE L2 2553 3008 -264 241 105 0 0 chr4 4406167 4406205 -197922142 + MLT1J2 LTR MaLR 72 109 -341 412 331 49 23 chr4 4406225 4406491 -197921856 + MLT1J LTR MaLR 237 509 -2 324 298 65 24 chr4 4406610 4406734 -197921613 + L2 LINE L2 3136 3264 -8 2274 154 16 34 chr4 4406815 4406878 -197921469 + L1PA16 LINE L1 5724 5787 -379 1936 134 10 58 chr4 4406878 4407006 -197921341 + AluJo SINE Alu 6 139 -173 2226 108 0 17 chr4 4407006 4407301 -197921046 + AluSq SINE Alu 1 290 -23 1936 134 10 58 chr4 4407301 4407485 -197920862 + AluJo SINE Alu 139 303 -9 2274 154 16 34 chr4 4407485 4407869 -197920478 + L1PA16 LINE L1 5787 6163 -3 191 88 29 0 chr4 4409107 4409141 -197919206 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 464 283 7 0 chr4 4409160 4409305 -197919042 + L1ME4a LINE L1 5965 6110 -11 2264 122 3 0 chr4 4409645 4409956 -197918391 + AluSx SINE Alu 1 312 0 2180 126 27 36 chr4 4410350 4410715 -197917632 - THE1B LTR MaLR 0 364 3 218 318 148 34 chr4 4411481 4411533 -197916814 - MIR SINE MIR -6 256 211 1591 154 80 50 chr4 4411533 4411897 -197916450 + THE1C LTR MaLR 1 375 0 218 318 148 34 chr4 4411897 4412020 -197916327 - MIR SINE MIR -51 211 61 2345 101 55 71 chr4 4412572 4412629 -197915718 + MSTC LTR MaLR 1 57 -371 832 139 16 0 chr4 4412629 4412758 -197915589 + FLAM_C SINE Alu 3 133 0 2345 101 55 71 chr4 4412758 4413135 -197915212 + MSTC LTR MaLR 57 428 0 871 196 15 35 chr4 4413431 4413630 -197914717 + MLT1D LTR MaLR 41 235 -270 208 250 18 18 chr4 4413679 4413735 -197914612 - L2 LINE L2 -97 3216 3161 236 130 22 0 chr4 4414064 4414110 -197914237 + (TTCA)n Simple_repeat Simple_repeat 1 47 0 2092 116 0 75 chr4 4414292 4414627 -197913720 - AluSx SINE Alu -2 310 1 2347 113 0 10 chr4 4414732 4415042 -197913305 - AluSx SINE Alu -5 307 1 688 138 9 0 chr4 4415055 4415164 -197913183 - AluJb SINE Alu -12 300 191 225 336 34 48 chr4 4415304 4415451 -197912896 - MER5A DNA MER1_type -28 161 6 269 301 32 0 chr4 4415500 4415593 -197912754 - MER5A DNA MER1_type -84 105 10 1974 121 69 0 chr4 4415655 4415945 -197912402 - AluSg SINE Alu 0 310 1 263 167 0 0 chr4 4415961 4416003 -197912344 - 5S rRNA rRNA -79 42 1 373 213 56 9 chr4 4416082 4416190 -197912157 - MIR SINE MIR -107 155 43 1911 67 14 25 chr4 4416302 4416585 -197911762 - L1PA7 LINE L1 -1 6153 5874 516 275 24 35 chr4 4416586 4416784 -197911563 - MIR SINE MIR -62 146 2 900 238 67 18 chr4 4416818 4417100 -197911247 - MLT1C LTR MaLR 0 467 172 841 152 22 0 chr4 4417149 4417287 -197911060 - AluJo SINE Alu -171 141 1 2308 99 3 0 chr4 4417299 4417591 -197910756 - AluSx SINE Alu -19 293 1 1090 99 0 0 chr4 4417633 4417795 -197910552 + L1PB2 LINE L1 5990 6151 0 482 287 78 62 chr4 4417988 4418246 -197910101 + L1ME LINE L1 5514 5775 -346 996 179 25 0 chr4 4418449 4418645 -197909702 + LTR48B LTR ERV1 1 201 -443 1703 124 24 3 chr4 4418646 4418937 -197909410 - LTR23 LTR ERV1 0 437 141 2149 115 0 0 chr4 4418940 4419219 -197909128 - AluSg SINE Alu -1 309 31 5380 61 103 0 chr4 4419219 4419968 -197908379 - LTR12 LTR ERV1 0 826 1 249 88 0 0 chr4 4419968 4420002 -197908345 - AluSg SINE Alu -269 34 1 569 184 82 54 chr4 4420005 4420152 -197908195 - LTR23 LTR ERV1 -286 151 1 495 216 9 26 chr4 4420273 4420389 -197907958 - LTR23-int LTR ERV1 -223 4900 4787 5128 147 28 14 chr4 4420403 4421417 -197906930 - LTR49-int LTR ERV1 -478 6120 4608 2608 41 0 0 chr4 4421423 4421716 -197906631 + AluY SINE Alu 1 293 -18 1421 113 5 0 chr4 4421817 4422003 -197906344 - AluSg SINE Alu -123 187 1 832 209 83 7 chr4 4422004 4422462 -197905885 + L1MA9 LINE L1 5661 6183 0 2161 209 36 53 chr4 4422485 4422501 -197905846 - MER92B LTR ERV1 -4 632 617 2443 82 7 0 chr4 4422501 4422795 -197905552 + AluSq SINE Alu 1 296 -17 2161 209 36 53 chr4 4422795 4423420 -197904927 - MER92B LTR ERV1 -19 617 2 202 270 11 34 chr4 4423533 4423622 -197904725 - L2 LINE L2 -188 3084 2998 323 183 11 75 chr4 4423727 4423820 -197904527 - LTR33A LTR ERVL -11 512 426 308 237 67 30 chr4 4425073 4425208 -197903139 - MER65B LTR ERV1 -391 140 1 267 236 28 0 chr4 4425286 4425358 -197902989 + MIR SINE MIR 111 184 -78 229 237 75 32 chr4 4425485 4425578 -197902769 + L2 LINE L2 3136 3232 -40 2370 99 0 7 chr4 4425862 4426166 -197902181 + AluSx SINE Alu 1 302 -10 450 143 48 0 chr4 4426360 4426444 -197901903 - AluS SINE Alu 0 309 222 820 255 50 50 chr4 4476931 4477521 -197850826 + L1ME LINE L1 678 1257 -4823 1058 235 65 0 chr4 4477631 4477891 -197850456 - MLT1-int LTR MaLR -139 1232 956 2194 221 4 6 chr4 4478289 4478764 -197849583 - MLT1-int LTR MaLR -1075 660 187 309 309 43 25 chr4 4479068 4479230 -197849117 - L1M4 LINE L1 -5336 1206 1042 633 216 14 7 chr4 4479693 4479832 -197848515 + MLT1A1 LTR MaLR 225 364 -1 577 142 53 18 chr4 4479834 4479947 -197848400 + MLT1A1-int LTR MaLR 2 118 -1617 2164 134 0 15 chr4 4480225 4480567 -197847780 - MER1B DNA MER1_type 0 337 1 446 233 200 30 chr4 4480645 4480945 -197847402 - L1MEc LINE L1 -4418 1978 1628 989 106 0 73 chr4 4480957 4481136 -197847211 + MLT2A2 LTR ERVL 1 166 -287 890 122 0 0 chr4 4481137 4481252 -197847095 - AluSq/x SINE Alu -197 115 1 259 241 13 25 chr4 4481254 4481333 -197847014 + LTR52 LTR ERVL 16 93 -328 * 648 175 0 17 chr4 4481329 4481449 -197846898 - MLT1A1 LTR MaLR -247 118 1 6724 75 26 5 chr4 4482299 4483260 -197845087 - L1PA11 LINE L1 -1 6173 5209 21 71 0 0 chr4 4483359 4483401 -197844946 + AT_rich Low_complexity Low_complexity 1 42 0 612 270 10 99 chr4 4483413 4483706 -197844641 - L2 LINE L2 -161 3152 2886 407 296 0 74 chr4 4483710 4483872 -197844475 - L2 LINE L2 -985 2329 2180 3607 53 2 0 chr4 4484235 4484708 -197843639 + L1PA8 LINE L1 5467 5940 -232 1673 166 54 11 chr4 4485213 4485491 -197842856 - AluJb SINE Alu -22 290 1 284 276 38 0 chr4 4485494 4485599 -197842748 + L1M4 LINE L1 2749 2857 -3289 1184 306 15 11 chr4 4485608 4486076 -197842271 + L1ME3A LINE L1 5696 6165 -5 905 248 35 13 chr4 4486105 4486335 -197842012 + MIR SINE MIR 10 244 -18 2830 201 55 16 chr4 4486413 4487090 -197841257 + L1MD2 LINE L1 5630 6332 -27 404 306 121 25 chr4 4487091 4487290 -197841057 + MIR SINE MIR 34 251 -11 333 0 0 0 chr4 4487461 4487498 -197840849 + (TG)n Simple_repeat Simple_repeat 2 38 0 181 49 0 73 chr4 4487889 4487930 -197840417 + (TTTTTG)n Simple_repeat Simple_repeat 6 43 0 229 265 61 31 chr4 4488004 4488102 -197840245 + MER5A DNA MER1_type 4 104 -85 390 290 28 7 chr4 4488146 4488291 -197840056 - MIR3 SINE MIR -48 160 13 262 50 0 25 chr4 4488532 4488572 -197839775 + MIR SINE MIR 102 140 -122 399 250 31 55 chr4 4488860 4488988 -197839359 - MIR3 SINE MIR -15 193 69 378 147 29 0 chr4 4488991 4489059 -197839288 + MLT1A2 LTR MaLR 1 70 -304 1708 80 0 24 chr4 4489159 4489408 -197838939 + L1PA8 LINE L1 5930 6172 0 438 20 0 0 chr4 4489931 4489982 -197838365 + (TG)n Simple_repeat Simple_repeat 1 51 0 1001 143 62 85 chr4 4490094 4490318 -197838029 - MER20 DNA MER1_type 0 219 1 280 350 39 56 chr4 4492764 4492944 -197835403 - L2 LINE L2 -2 3270 3094 25 31 0 0 chr4 4493379 4493411 -197834936 + AT_rich Low_complexity Low_complexity 1 32 0 21 36 0 0 chr4 4494919 4494947 -197833400 + AT_rich Low_complexity Low_complexity 1 28 0 2428 82 7 0 chr4 4495983 4496288 -197832059 - AluSg SINE Alu -3 307 1 22 0 0 0 chr4 4500857 4500879 -197827468 + AT_rich Low_complexity Low_complexity 1 22 0 464 188 354 11 chr4 4501191 4501372 -197826975 - MIR SINE MIR -10 252 10 515 295 181 54 chr4 4501452 4502049 -197826298 + L2 LINE L2 2077 2749 -565 355 391 31 65 chr4 4502067 4502389 -197825958 + L2 LINE L2 2962 3272 0 648 321 66 45 chr4 4502511 4503028 -197825319 + MLT1K LTR MaLR 40 567 -21 225 0 0 0 chr4 4503164 4503189 -197825158 + (GAAAA)n Simple_repeat Simple_repeat 4 28 0 555 260 103 18 chr4 4503365 4503588 -197824759 + L3b LINE CR1 1161 1402 -181 328 296 51 0 chr4 4503711 4503809 -197824538 - L2 LINE L2 -1 3271 3169 771 179 8 22 chr4 4504899 4505033 -197823314 + FLAM_A SINE Alu 1 132 -1 423 187 0 0 chr4 4505985 4506092 -197822255 + (TA)n Simple_repeat Simple_repeat 1 107 0 458 227 9 9 chr4 4506367 4506477 -197821870 - LTR33 LTR ERVL -343 178 69 2200 137 38 11 chr4 4506477 4506850 -197821497 + MSTB LTR MaLR 44 426 0 462 259 83 19 chr4 4506886 4507091 -197821256 + LTR16A LTR ERVL 59 276 -174 2196 89 31 0 chr4 4507292 4507585 -197820762 + AluY SINE Alu 1 302 -9 235 244 110 37 chr4 4507972 4508054 -197820293 + MIR SINE MIR 175 262 0 412 226 124 0 chr4 4508358 4508495 -197819852 - L1ME4a LINE L1 0 6121 5968 31 0 0 0 chr4 4508586 4508617 -197819730 + AT_rich Low_complexity Low_complexity 1 31 0 1608 180 0 4 chr4 4508861 4509117 -197819230 - AluSx SINE Alu -57 255 1 334 272 123 31 chr4 4509167 4509329 -197819018 - L1 LINE L1 -1088 5058 4882 216 0 0 0 chr4 4509363 4509387 -197818960 + (CA)n Simple_repeat Simple_repeat 2 25 0 322 334 127 23 chr4 4509431 4509730 -197818617 - L1 LINE L1 -1517 4629 4300 324 338 44 19 chr4 4510144 4510304 -197818043 + L1MC4a LINE L1 5708 5871 -1937 181 73 24 24 chr4 4510654 4510695 -197817652 + (CAAAAA)n Simple_repeat Simple_repeat 3 43 0 494 270 0 0 chr4 4510819 4510934 -197817413 - MIR3 SINE MIR -28 180 66 189 329 14 0 chr4 4511667 4511737 -197816610 + MIR SINE MIR 180 250 -12 917 216 72 0 chr4 4512936 4513144 -197815203 - MER58A DNA MER1_type -1 223 1 205 191 143 0 chr4 4513449 4513491 -197814856 + L2 LINE L2 3219 3266 -6 203 203 0 109 chr4 4514387 4514451 -197813896 - MIR3 SINE MIR 0 208 152 1140 250 192 5 chr4 4514482 4514940 -197813407 - L2 LINE L2 0 3313 2770 185 254 164 15 chr4 4516123 4516190 -197812157 - L3 LINE CR1 -132 1445 1369 581 311 77 56 chr4 4516197 4516275 -197812072 - L3 LINE CR1 -322 1255 1180 2360 73 0 13 chr4 4516275 4516575 -197811772 - AluSc SINE Alu -13 296 1 581 311 77 56 chr4 4516575 4516872 -197811475 - L3 LINE CR1 -397 1180 872 260 309 147 29 chr4 4517069 4517273 -197811074 - L3 LINE CR1 -1089 488 261 490 326 70 11 chr4 4517518 4517705 -197810642 + MIR SINE MIR 47 244 -18 600 264 106 22 chr4 4518885 4519112 -197809235 - MIR SINE MIR 0 262 17 418 259 280 16 chr4 4519775 4519968 -197808379 - MIR SINE MIR -1 261 18 197 250 21 0 chr4 4520267 4520315 -197808032 + L2 LINE L2 3186 3234 -38 972 104 0 15 chr4 4521804 4521962 -197806385 - FLAM_C SINE Alu 0 156 1 313 300 70 0 chr4 4526662 4526762 -197801585 + MIR3 SINE MIR 78 184 -24 261 284 74 0 chr4 4526916 4526997 -197801350 - MIR SINE MIR -71 191 105 293 191 0 0 chr4 4527394 4527441 -197800906 - MER5B DNA MER1_type -131 47 1 789 227 104 5 chr4 4527459 4527679 -197800668 + MIR SINE MIR 13 254 -8 1232 179 25 68 chr4 4527791 4528070 -197800277 - AluJo SINE Alu -2 310 44 188 259 138 0 chr4 4528537 4528595 -197799752 - MIR3 SINE MIR -52 156 91 703 264 24 81 chr4 4529903 4530149 -197798198 - MIR SINE MIR -29 233 2 345 298 12 0 chr4 4530855 4530939 -197797408 + L2 LINE L2 3229 3313 0 211 353 35 0 chr4 4531251 4531336 -197797011 + L3b LINE CR1 1422 1509 -74 1646 175 42 18 chr4 4532681 4533012 -197795335 - MER2 DNA MER2_type -3 341 3 550 240 56 56 chr4 4533028 4533166 -197795181 - L1ME4a LINE L1 -198 5923 5783 2154 116 0 7 chr4 4533166 4533476 -197794871 + AluSq SINE Alu 1 308 -5 550 240 56 56 chr4 4533476 4533570 -197794777 - L1ME4a LINE L1 -337 5784 5691 420 221 0 12 chr4 4533925 4534011 -197794336 + MIR3 SINE MIR 117 201 -7 180 258 0 65 chr4 4535023 4535085 -197793262 - L2 LINE L2 -60 3212 3155 361 300 61 40 chr4 4535085 4535362 -197792985 + Charlie2 DNA MER1_type 1 283 -2499 2713 224 76 35 chr4 4535390 4535986 -197792361 + Charlie2 DNA MER1_type 1852 2505 -357 563 95 21 0 chr4 4535986 4536081 -197792266 + L1PB2 LINE L1 6053 6149 -2 2713 224 76 35 chr4 4536081 4536455 -197791892 + Charlie2 DNA MER1_type 2505 2862 0 189 333 49 31 chr4 4536549 4536732 -197791615 - L2 LINE L2 -313 2959 2701 381 259 45 18 chr4 4536792 4536904 -197791443 - L2 LINE L2 0 3272 3158 1262 187 68 3 chr4 4536950 4537300 -197791047 + L1MD2 LINE L1 5211 5577 -751 1258 126 40 20 chr4 4537321 4537568 -197790779 - L1MB8 LINE L1 -5 6173 5922 2026 140 35 85 chr4 4537573 4537912 -197790435 - MER47B DNA MER2_type -1910 413 99 1950 124 16 29 chr4 4537912 4538219 -197790128 + AluSx SINE Alu 5 307 -5 2026 140 35 85 chr4 4538219 4538314 -197790033 - MER47B DNA MER2_type -2224 99 1 1249 137 39 13 chr4 4538314 4538548 -197789799 - L1MB8 LINE L1 -261 5923 5684 * 1432 234 63 0 chr4 4538546 4539013 -197789334 + L1MD2 LINE L1 5579 6080 -86 1357 105 79 31 chr4 4539042 4539359 -197788988 - Tigger7 DNA MER2_type -34 2553 1 437 198 143 0 chr4 4539575 4539666 -197788681 + Tigger5 DNA MER2_type 132 235 -2088 2446 64 0 0 chr4 4540110 4540408 -197787939 - AluY SINE Alu -13 298 1 828 124 25 8 chr4 4540409 4540530 -197787817 - AluJb SINE Alu -178 134 12 4008 138 46 32 chr4 4540541 4541052 -197787295 - L1MB3 LINE L1 -42 6141 5614 2053 146 36 33 chr4 4541052 4541415 -197786932 + THE1B LTR MaLR 1 364 0 4008 138 46 32 chr4 4541415 4541710 -197786637 - L1MB3 LINE L1 -569 5614 5324 1411 107 20 0 chr4 4541762 4541958 -197786389 - AluSq SINE Alu -113 200 1 583 242 152 51 chr4 4542397 4542806 -197785541 + MLT1J2 LTR MaLR 1 450 0 213 203 0 68 chr4 4542937 4542996 -197785351 - L2 LINE L2 -82 3190 3136 256 271 26 56 chr4 4543074 4543225 -197785122 + MIR SINE MIR 8 156 -67 2433 99 0 0 chr4 4543457 4543769 -197784578 - AluSx SINE Alu 0 312 1 263 325 73 14 chr4 4543799 4543941 -197784406 - MIR SINE MIR -62 146 1 1099 296 69 11 chr4 4544067 4544503 -197783844 + L2 LINE L2 2853 3313 0 2355 36 11 0 chr4 4544602 4544878 -197783469 + AluY SINE Alu 31 309 -2 2148 123 0 37 chr4 4545266 4545554 -197782793 + AluSq SINE Alu 1 277 -36 180 0 0 0 chr4 4545554 4545574 -197782773 + (TAA)n Simple_repeat Simple_repeat 2 21 0 2148 123 0 37 chr4 4545574 4545610 -197782737 + AluSq SINE Alu 277 313 0 2390 67 0 3 chr4 4546013 4546312 -197782035 - AluY SINE Alu -13 298 1 1958 153 3 7 chr4 4546606 4546906 -197781441 - AluJb SINE Alu -11 301 3 401 306 14 27 chr4 4547034 4547181 -197781166 - MIR SINE MIR -3 259 115 223 304 89 60 chr4 4547271 4547439 -197780908 - L2 LINE L2 -184 3088 2916 274 243 27 14 chr4 4547533 4547607 -197780740 + MIR SINE MIR 88 153 -55 1886 172 33 32 chr4 4547607 4548154 -197780193 - MLT2A2 LTR ERVL 0 554 4 601 203 209 89 chr4 4548529 4548844 -197779503 - MLT1J1 LTR MaLR -23 427 74 3957 205 22 54 chr4 4548908 4549297 -197779050 + L1MB7 LINE L1 4362 4762 -1422 1195 160 84 0 chr4 4549297 4549535 -197778812 + L1MB3 LINE L1 5923 6180 -3 3957 205 22 54 chr4 4549535 4549721 -197778626 + L1MB7 LINE L1 4762 4952 -1232 4285 65 0 7 chr4 4549721 4550275 -197778072 - L1PA13 LINE L1 -2 6161 5612 3957 205 22 54 chr4 4550275 4550708 -197777639 + L1MB7 LINE L1 4952 5397 -787 2160 108 3 0 chr4 4550708 4551003 -197777344 + AluSp SINE Alu 1 296 -17 3957 205 22 54 chr4 4551003 4551360 -197776987 + L1MB7 LINE L1 5397 5764 -420 2642 139 27 2 chr4 4551360 4551771 -197776576 - MSTB LTR MaLR -1 425 5 3957 205 22 54 chr4 4551771 4552287 -197776060 + L1MB7 LINE L1 5764 6184 0 314 246 89 73 chr4 4552335 4552562 -197775785 - L2 LINE L2 -186 3086 2856 263 241 51 25 chr4 4552685 4552764 -197775583 + L2 LINE L2 3146 3226 -46 561 286 85 5 chr4 4553766 4553955 -197774392 - MIR SINE MIR -57 205 2 299 250 0 0 chr4 4553960 4554032 -197774315 + MER81 DNA DNA 1 72 -42 1602 150 40 44 chr4 4554043 4554176 -197774171 + AluJo SINE Alu 1 133 -179 2365 104 0 0 chr4 4554176 4554474 -197773873 + AluSx SINE Alu 1 298 -14 1602 150 40 44 chr4 4554474 4554614 -197773733 + AluJo SINE Alu 133 273 -39 1805 154 129 7 chr4 4554726 4555126 -197773221 + MLT1D LTR MaLR 26 467 0 295 330 76 0 chr4 4555502 4555620 -197772727 - L2 LINE L2 0 3272 3146 620 266 107 64 chr4 4555621 4555833 -197772514 + Charlie7 DNA MER1_type 1 202 -2410 2027 118 81 35 chr4 4555833 4556181 -197772166 + THE1B LTR MaLR 1 364 0 620 266 107 64 chr4 4556181 4556499 -197771848 + Charlie7 DNA MER1_type 202 554 -2058 192 77 0 0 chr4 4556516 4556542 -197771805 + (GA)n Simple_repeat Simple_repeat 2 27 0 1843 159 7 3 chr4 4556797 4557117 -197771230 - AluJb SINE Alu 0 321 1 2197 138 52 6 chr4 4557162 4557510 -197770837 - THE1B LTR MaLR 0 364 1 822 231 7 0 chr4 4557512 4557659 -197770688 - FAM SINE Alu -36 149 2 314 200 91 0 chr4 4557660 4557770 -197770577 + Charlie7 DNA MER1_type 2453 2572 -40 227 227 0 30 chr4 4557961 4558027 -197770320 + MLT1J2 LTR MaLR 67 130 -320 850 249 121 55 chr4 4558029 4558548 -197769799 - MLT1G1 LTR MaLR -1 554 34 274 265 116 79 chr4 4558664 4558853 -197769494 + MLT1J LTR MaLR 310 505 -6 2064 101 0 8 chr4 4559151 4559418 -197768929 + AluSq SINE Alu 1 265 -48 1974 138 0 10 chr4 4559421 4559725 -197768622 + MLT1A1 LTR MaLR 65 365 0 593 261 43 68 chr4 4559733 4559967 -197768380 - MIR SINE MIR -29 233 6 389 312 12 58 chr4 4559966 4560139 -197768208 + MIR3 SINE MIR 40 204 -4 * 297 167 0 0 chr4 4560383 4560437 -197767910 + (CA)n Simple_repeat Simple_repeat 1 54 0 2365 115 0 0 chr4 4560803 4561115 -197767232 + AluSx SINE Alu 1 312 0 1137 258 79 25 chr4 4561331 4561398 -197766949 + MLT1L LTR MaLR 143 205 -410 2086 232 102 16 chr4 4561398 4561945 -197766402 + MLT1G1 LTR MaLR 2 595 0 1137 258 79 25 chr4 4561945 4562322 -197766025 + MLT1L LTR MaLR 205 611 -4 381 299 86 41 chr4 4562326 4562523 -197765824 - MIR SINE MIR -44 218 13 303 312 29 0 chr4 4562544 4562667 -197765680 + MIR SINE MIR 12 139 -69 1183 141 0 17 chr4 4563744 4563911 -197764436 - AluSg/x SINE Alu -12 300 135 2456 76 3 13 chr4 4563911 4564226 -197764121 - AluSq SINE Alu -1 312 1 2351 98 3 0 chr4 4564299 4564604 -197763743 - AluY SINE Alu -5 306 1 348 269 83 28 chr4 4564904 4565049 -197763298 + MIR SINE MIR 58 210 -52 233 279 135 29 chr4 4565398 4565502 -197762845 + MIR SINE MIR 67 181 -81 327 294 73 0 chr4 4565532 4565641 -197762706 + MIR SINE MIR 57 173 -89 577 254 29 35 chr4 4565837 4565978 -197762369 + MIR SINE MIR 31 172 -90 2297 105 0 7 chr4 4565978 4566304 -197762043 + AluSx SINE Alu 1 312 0 577 254 29 35 chr4 4566304 4566335 -197762012 + MIR SINE MIR 172 202 -60 327 260 0 0 chr4 4566578 4566655 -197761692 + L2 LINE L2 2981 3057 -215 210 369 29 0 chr4 4566876 4566979 -197761368 - MIR SINE MIR -91 171 66 647 277 66 31 chr4 4567218 4567536 -197760811 - L1MC4a LINE L1 -1922 5886 5558 2295 110 13 0 chr4 4567660 4567961 -197760386 - AluSx SINE Alu -7 305 1 216 290 32 0 chr4 4568032 4568094 -197760253 + MIR SINE MIR 81 144 -64 405 268 150 0 chr4 4568564 4568691 -197759656 - MIR SINE MIR 0 262 117 219 293 190 17 chr4 4569031 4569205 -197759142 - L2 LINE L2 -50 3222 3019 183 80 0 0 chr4 4569600 4569625 -197758722 + (A)n Simple_repeat Simple_repeat 1 25 0 673 276 98 19 chr4 4570398 4570612 -197757735 - MIR SINE MIR -3 259 29 1448 215 93 9 chr4 4570842 4571186 -197757161 - MLT1A2 LTR MaLR 0 374 2 690 297 67 5 chr4 4571286 4571481 -197756866 + MIR SINE MIR 50 256 -6 1749 137 96 0 chr4 4571491 4571761 -197756586 - AluJo SINE Alu -14 298 3 513 0 0 0 chr4 4571768 4571825 -197756522 + (TTA)n Simple_repeat Simple_repeat 3 59 0 1196 118 0 0 chr4 4571956 4572134 -197756213 - L1PA14 LINE L1 0 6161 5984 215 261 94 58 chr4 4572502 4572640 -197755707 + L2 LINE L2 2956 3098 -174 617 282 70 37 chr4 4572698 4572939 -197755408 + MIR SINE MIR 4 252 -10 325 232 0 14 chr4 4572983 4573052 -197755295 + L2 LINE L2 3242 3309 -4 208 269 30 0 chr4 4573526 4573593 -197754754 - MIR SINE MIR -7 255 187 1354 253 48 27 chr4 4573641 4573795 -197754552 + MLT1C LTR MaLR 17 166 -301 2181 118 0 6 chr4 4573795 4574108 -197754239 + AluSx SINE Alu 1 311 -1 1354 253 48 27 chr4 4574108 4574395 -197753952 + MLT1C LTR MaLR 166 467 0 1789 163 7 0 chr4 4575065 4575335 -197753012 + AluJo SINE Alu 33 304 -8 4799 128 55 3 chr4 4575585 4576325 -197752022 - MER4E LTR ERV1 0 779 1 1838 119 22 29 chr4 4576909 4577220 -197751127 + THE1B LTR MaLR 56 364 0 1159 202 175 19 chr4 4577220 4577591 -197750756 - MLT1C LTR MaLR -33 434 6 1476 208 140 20 chr4 4577807 4578206 -197750141 + MLT2B1 LTR ERVL 3 449 -71 25 51 0 0 chr4 4578227 4578266 -197750081 + AT_rich Low_complexity Low_complexity 1 39 0 325 265 12 0 chr4 4579095 4579178 -197749169 - MER81 DNA DNA -1 113 30 495 310 21 5 chr4 4579227 4579414 -197748933 - LTR16A LTR ERVL -104 346 157 376 195 114 57 chr4 4579421 4579620 -197748727 + MIR SINE MIR 44 259 -3 700 266 0 12 chr4 4579703 4579872 -197748475 - MIR SINE MIR 0 262 96 1813 179 0 28 chr4 4579921 4580294 -197748053 - AluJb SINE Alu 0 364 1 4272 191 12 21 chr4 4580360 4581247 -197747100 + L1MB5 LINE L1 5260 6138 -36 427 297 109 30 chr4 4581528 4581693 -197746654 + MER91A DNA MER1_type 1 178 -18 419 301 45 32 chr4 4582323 4582479 -197745868 + MIR3 SINE MIR 25 182 -26 542 180 0 0 chr4 4582598 4582698 -197745649 - L1M4 LINE L1 -463 5715 5616 2157 126 20 0 chr4 4582734 4583035 -197745312 - AluSq SINE Alu -6 307 1 2665 153 16 63 chr4 4583070 4583544 -197744803 - L1MB8 LINE L1 -17 6161 5717 2054 143 27 0 chr4 4583544 4583844 -197744503 + AluSx SINE Alu 1 308 -4 2665 153 16 63 chr4 4583844 4583939 -197744408 - L1MB8 LINE L1 -461 5717 5619 245 361 0 0 chr4 4583969 4584088 -197744259 - L2 LINE L2 -965 2349 2231 2089 224 38 19 chr4 4585062 4585589 -197742758 + MLT1F LTR MaLR 6 542 0 223 298 46 46 chr4 4586005 4586223 -197742124 - L2 LINE L2 -1108 2206 1989 959 224 0 0 chr4 4587549 4587719 -197740628 + MER5A DNA MER1_type 1 170 -19 1980 195 88 27 chr4 4587764 4588240 -197740107 + MLT1D LTR MaLR 1 505 0 244 280 37 19 chr4 4588385 4588492 -197739855 + LTR67 LTR ERVL 432 540 -17 558 257 11 73 chr4 4588563 4588673 -197739674 - MIR SINE MIR -17 245 149 3182 102 42 86 chr4 4588673 4589264 -197739083 - MER34B LTR ERV1 0 565 1 558 257 11 73 chr4 4589264 4589332 -197739015 - MIR SINE MIR -113 149 78 294 316 43 43 chr4 4589415 4589554 -197738793 + MIR SINE MIR 108 246 -16 434 301 3 7 chr4 4590326 4590460 -197737887 + MIR SINE MIR 17 150 -83 222 157 176 0 chr4 4590503 4590554 -197737793 - L2 LINE L2 -8 3305 3246 921 155 6 11 chr4 4590670 4590844 -197737503 + MLT1B LTR MaLR 1 173 -217 2343 99 16 0 chr4 4590848 4591151 -197737196 + AluSq SINE Alu 1 308 -5 2410 107 0 0 chr4 4591159 4591468 -197736879 + AluSq SINE Alu 1 309 -4 1350 187 38 29 chr4 4592381 4592697 -197735650 + MLT1A2 LTR MaLR 56 374 0 299 231 37 65 chr4 4593495 4593603 -197734744 + MIR SINE MIR 80 184 -78 482 162 20 10 chr4 4593653 4593752 -197734595 + MER96B DNA MER1_type? 32 131 -286 185 248 202 47 chr4 4593842 4593971 -197734376 + MIR SINE MIR 28 176 -86 215 240 73 62 chr4 4594360 4594456 -197733891 + MIR SINE MIR 133 229 -33 270 0 0 0 chr4 4595212 4595242 -197733105 + (TG)n Simple_repeat Simple_repeat 2 31 0 347 0 23 0 chr4 4595304 4595347 -197733000 + (TG)n Simple_repeat Simple_repeat 2 45 0 2864 78 16 3 chr4 4595598 4595968 -197732379 - THE1C LTR MaLR 0 375 1 395 254 60 8 chr4 4596096 4596230 -197732117 - LTR16A1 LTR ERVL -47 410 270 207 273 0 0 chr4 4596554 4596598 -197731749 + L2 LINE L2 3136 3179 -93 528 248 32 16 chr4 4596751 4596876 -197731471 + L2 LINE L2 3145 3271 -1 228 200 18 0 chr4 4597064 4597119 -197731228 - L2 LINE L2 -299 2973 2918 1792 128 134 15 chr4 4597440 4597775 -197730572 - THE1C LTR MaLR 0 375 1 2844 258 214 11 chr4 4598045 4599258 -197729089 + L1MC4 LINE L1 6446 7903 -139 341 118 0 0 chr4 4599352 4599403 -197728944 - MSTA LTR MaLR -376 52 2 803 294 124 13 chr4 4599596 4599956 -197728391 + L2 LINE L2 2738 3178 -135 2370 107 48 25 chr4 4599956 4600312 -197728035 + THE1B LTR MaLR 1 364 0 803 294 124 13 chr4 4600312 4600422 -197727925 + L2 LINE L2 3178 3274 -39 404 297 0 0 chr4 4600513 4600614 -197727733 - MIR SINE MIR -55 153 53 225 0 0 0 chr4 4600635 4600660 -197727687 + (CA)n Simple_repeat Simple_repeat 2 26 0 233 315 9 45 chr4 4600938 4601049 -197727298 - MER67B LTR ERV1 -500 161 55 568 275 40 29 chr4 4601301 4601538 -197726809 + MIR SINE MIR 2 247 -15 2289 105 3 0 chr4 4602171 4602467 -197725880 + AluSp SINE Alu 1 297 -16 358 292 62 0 chr4 4602546 4602642 -197725705 - L2 LINE L2 0 3313 3212 353 331 31 8 chr4 4602635 4602765 -197725582 + L2 LINE L2 2920 3052 -220 * 2958 128 27 2 chr4 4602837 4603321 -197725026 - L1MC2 LINE L1 -10 6334 5839 234 0 0 0 chr4 4603322 4603348 -197724999 + (T)n Simple_repeat Simple_repeat 1 26 0 320 272 19 19 chr4 4603410 4603513 -197724834 - LTR33 LTR ERVL -115 406 304 574 275 31 5 chr4 4603580 4603773 -197724574 - LTR33 LTR ERVL -323 198 1 383 198 207 18 chr4 4603775 4603886 -197724461 - MIR SINE MIR -58 204 73 2042 147 21 0 chr4 4603904 4604237 -197724110 - L1MC1 LINE L1 -480 5853 5514 217 227 18 172 chr4 4604701 4604864 -197723483 - L2 LINE L2 -81 3191 3054 246 261 161 97 chr4 4604882 4605231 -197723116 + MLT1I LTR MaLR 18 388 -21 301 275 14 56 chr4 4605510 4605652 -197722695 + MLT1L LTR MaLR 154 289 -326 296 282 68 8 chr4 4605924 4606041 -197722306 - MIR SINE MIR 0 262 139 270 0 0 0 chr4 4606361 4606391 -197721956 + (TTA)n Simple_repeat Simple_repeat 2 31 0 2225 63 44 0 chr4 4606395 4606665 -197721682 - AluY SINE Alu -29 282 1 1617 191 11 46 chr4 4606904 4607270 -197721077 + L1PA16 LINE L1 5814 6166 0 204 40 0 0 chr4 4607732 4607757 -197720590 + (CA)n Simple_repeat Simple_repeat 2 26 0 626 310 103 42 chr4 4607792 4608240 -197720107 + L3 LINE CR1 733 1207 -370 215 351 44 18 chr4 4608238 4608334 -197720013 + L2 LINE L2 3155 3256 -16 * 1726 146 3 57 chr4 4608334 4608649 -197719698 + AluJo SINE Alu 1 298 -14 215 351 44 18 chr4 4608649 4608666 -197719681 + L2 LINE L2 3256 3271 -1 191 403 17 0 chr4 4608660 4608779 -197719568 + L3 LINE CR1 1385 1505 -72 * 2571 157 29 5 chr4 4608827 4609242 -197719105 + MER61B LTR ERV1 1 425 0 251 193 53 0 chr4 4609352 4609409 -197718938 + GA-rich Low_complexity Low_complexity 2 61 0 201 39 0 0 chr4 4609501 4609527 -197718820 + (TTTTTG)n Simple_repeat Simple_repeat 2 27 0 215 268 138 65 chr4 4609558 4609681 -197718666 + L2 LINE L2 3169 3300 -13 219 69 0 0 chr4 4609681 4609710 -197718637 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 237 363 108 0 chr4 4610208 4610310 -197718037 + L2 LINE L2 3200 3312 -1 221 249 129 41 chr4 4610334 4610527 -197717820 - MIR SINE MIR -38 224 8 878 161 0 15 chr4 4610772 4610909 -197717438 + FRAM SINE Alu 20 154 -22 2164 114 7 0 chr4 4611868 4612177 -197716170 - AluSx SINE Alu 0 312 2 2248 96 0 20 chr4 4612190 4612491 -197715856 - AluSg SINE Alu -15 295 1 567 291 79 25 chr4 4612492 4612695 -197715652 + MIR SINE MIR 49 262 0 829 258 56 13 chr4 4614352 4614585 -197713762 - L3b LINE CR1 -159 1424 1182 328 277 178 50 chr4 4614855 4614913 -197713434 - MIR SINE MIR -28 234 185 2233 123 33 41 chr4 4614913 4615280 -197713067 + THE1B LTR MaLR 1 364 0 328 277 178 50 chr4 4615280 4615423 -197712924 - MIR SINE MIR -77 185 7 289 246 134 42 chr4 4615626 4615768 -197712579 + L2 LINE L2 3116 3270 -2 508 260 127 20 chr4 4615947 4616097 -197712250 + MIR3 SINE MIR 38 203 -5 2027 205 35 41 chr4 4616989 4617497 -197710850 + MLT1D LTR MaLR 1 505 0 2746 72 20 0 chr4 4617673 4618021 -197710326 - THE1A LTR MaLR 0 355 1 11780 95 16 1 chr4 4618021 4619578 -197708769 - THE1A-int LTR MaLR 0 1580 1 2896 71 3 0 chr4 4619578 4619932 -197708415 - THE1A LTR MaLR 0 355 1 466 180 128 10 chr4 4620334 4620455 -197707892 - MIR SINE MIR -65 143 28 351 0 0 0 chr4 4621196 4621235 -197707112 + (CA)n Simple_repeat Simple_repeat 1 39 0 1995 128 17 13 chr4 4621596 4621894 -197706453 - AluSx SINE Alu -12 300 2 1454 239 163 14 chr4 4622432 4622868 -197705479 - MLT1D LTR MaLR -4 501 1 2342 120 35 32 chr4 4622990 4623364 -197704983 - THE1C LTR MaLR 0 375 1 2365 105 0 31 chr4 4623514 4623870 -197704477 + AluSq SINE Alu 1 346 0 809 206 158 13 chr4 4624260 4624340 -197704007 - MLT1I LTR MaLR -3 406 339 3709 58 13 2 chr4 4624340 4624788 -197703559 + MLT2A2 LTR ERVL 1 453 0 809 206 158 13 chr4 4624788 4624935 -197703412 - MLT1I LTR MaLR -70 339 146 2372 148 2 15 chr4 4625042 4625440 -197702907 - Tigger2a DNA MER2_type -41 393 1 557 165 44 0 chr4 4625548 4625639 -197702708 + FAM SINE Alu 1 95 -90 2207 41 96 4 chr4 4626390 4626660 -197701687 + AluY SINE Alu 1 295 -16 515 184 72 0 chr4 4626734 4626859 -197701488 - Charlie1b DNA MER1_type 0 523 390 * 585 174 174 31 chr4 4626857 4627018 -197701329 - Charlie1b DNA MER1_type -262 261 78 964 156 17 6 chr4 4627136 4627309 -197701038 + FAM SINE Alu 1 175 0 306 354 76 0 chr4 4627561 4627705 -197700642 - MIR SINE MIR 0 262 108 221 340 31 10 chr4 4628652 4628749 -197699598 + L3 LINE CR1 1368 1466 -111 293 174 279 0 chr4 4629025 4629111 -197699236 + L2 LINE L2 3163 3272 0 243 338 42 0 chr4 4629117 4629188 -197699159 + L2 LINE L2 3134 3207 -65 606 195 113 1 chr4 4629195 4629354 -197698993 - MER69A DNA AcHobo 0 177 1 330 351 87 34 chr4 4629560 4629825 -197698522 - L2 LINE L2 -122 3150 2872 321 276 103 35 chr4 4629925 4630041 -197698306 + MIR SINE MIR 17 140 -68 387 299 28 0 chr4 4630453 4630560 -197697787 + L3 LINE CR1 1427 1536 -41 357 241 117 19 chr4 4631409 4631543 -197696804 + MIR SINE MIR 30 170 -65 323 279 112 39 chr4 4631861 4632040 -197696307 - MER117 DNA MER1_type 0 197 6 401 257 13 99 chr4 4632128 4632280 -197696067 - MIR3 SINE MIR -64 144 6 287 323 168 0 chr4 4632367 4632528 -197695819 + MIR SINE MIR 26 213 -49 361 300 27 0 chr4 4632529 4632639 -197695708 - MLT1K LTR MaLR -3 585 473 410 265 108 24 chr4 4633162 4633328 -197695019 + MIR3 SINE MIR 23 202 -6 21 0 0 0 chr4 4633968 4633989 -197694358 + AT_rich Low_complexity Low_complexity 1 21 0 2232 109 3 0 chr4 4634088 4634382 -197693965 + AluSp SINE Alu 1 295 -18 1336 167 31 108 chr4 4634503 4634637 -197693710 + MLT1A1 LTR MaLR 2 145 -220 2332 140 89 0 chr4 4634637 4635030 -197693317 - MSTA LTR MaLR 0 428 1 1336 167 31 108 chr4 4635030 4635285 -197693062 + MLT1A1 LTR MaLR 145 361 -4 223 294 168 25 chr4 4635455 4635574 -197692773 + MIR SINE MIR 29 164 -98 208 216 0 0 chr4 4635571 4635608 -197692739 + MIR SINE MIR 110 146 -62 * 378 200 56 11 chr4 4635615 4635705 -197692642 + MIR SINE MIR 99 192 -70 194 269 54 11 chr4 4636247 4636340 -197692007 - MIR3 SINE MIR -19 189 93 912 195 71 95 chr4 4636492 4636830 -197691517 + MLT1J LTR MaLR 45 374 -137 310 310 163 8 chr4 4636855 4636984 -197691363 - MIR SINE MIR -95 167 19 540 263 176 66 chr4 4637278 4637380 -197690967 + MLT1G1 LTR MaLR 3 92 -503 2193 125 3 0 chr4 4637380 4637677 -197690670 + AluSq SINE Alu 1 298 -15 540 263 176 66 chr4 4637677 4638107 -197690240 + MLT1G1 LTR MaLR 92 594 -1 612 139 9 26 chr4 4638941 4639056 -197689291 - L1MB7 LINE L1 -43 6141 6029 2148 135 3 13 chr4 4639066 4639241 -197689106 - AluSx SINE Alu -4 308 136 2055 133 7 7 chr4 4639241 4639541 -197688806 - AluSg1 SINE Alu -9 300 1 2148 135 3 13 chr4 4639541 4639676 -197688671 - AluSx SINE Alu -176 136 1 562 289 29 69 chr4 4639712 4639765 -197688582 - L1MC4a LINE L1 -1925 5883 5829 1898 171 0 13 chr4 4639765 4640074 -197688273 - AluJb SINE Alu -2 310 6 562 289 29 69 chr4 4640074 4640366 -197687981 - L1MC4a LINE L1 -1979 5829 5552 1096 216 103 23 chr4 4640585 4640962 -197687385 + MLT1J LTR MaLR 20 482 -29 288 250 99 24 chr4 4641057 4641292 -197687055 - L2 LINE L2 -22 3250 2935 701 96 36 2 chr4 4641770 4642021 -197686326 + AluSp SINE Alu 2 305 -8 361 322 70 74 chr4 4642299 4642758 -197685589 - L2 LINE L2 0 3272 2816 1477 231 58 14 chr4 4642964 4643392 -197684955 + MER39 LTR ERV1 261 707 0 1519 208 62 18 chr4 4643455 4643892 -197684455 - MLT1C LTR MaLR -4 463 8 290 179 218 0 chr4 4646224 4646302 -197682045 - MER5A DNA MER1_type -80 109 15 816 220 39 28 chr4 4646307 4646489 -197681858 - MER5A DNA MER1_type -5 184 1 322 312 24 16 chr4 4646640 4646765 -197681582 + L2 LINE L2 2944 3069 -203 498 216 89 10 chr4 4646926 4647064 -197681283 + MIR SINE MIR 54 206 -56 190 300 100 10 chr4 4647249 4647349 -197680998 - MIR SINE MIR -4 258 150 772 282 53 11 chr4 4647896 4648162 -197680185 + L2 LINE L2 3037 3313 0 4206 117 16 30 chr4 4648179 4648275 -197680072 + MER41B LTR ERV1 2 98 -537 2529 73 0 0 chr4 4648275 4648577 -197679770 - AluY SINE Alu -7 304 3 4206 117 16 30 chr4 4648577 4649123 -197679224 + MER41B LTR ERV1 98 635 0 350 297 21 41 chr4 4649291 4649436 -197678911 + MIR3 SINE MIR 3 144 -64 846 141 0 0 chr4 4649445 4649566 -197678781 + AluJb SINE Alu 3 123 -189 226 318 0 15 chr4 4650788 4650854 -197677493 - L2 LINE L2 -1 3271 3207 608 206 34 41 chr4 4651029 4651175 -197677172 + L2 LINE L2 3166 3310 -3 2362 64 0 7 chr4 4652207 4652503 -197675844 - AluSp SINE Alu -19 294 1 349 287 94 25 chr4 4652503 4652705 -197675642 - L1ME4a LINE L1 -294 5827 5612 481 51 51 25 chr4 4652713 4652733 -197675614 - Alu SINE Alu 0 310 292 2060 169 37 5 chr4 4652733 4653136 -197675211 - L1MB3 LINE L1 0 6183 5768 481 51 51 25 chr4 4653136 4653194 -197675153 - Alu SINE Alu -18 292 230 614 228 40 8 chr4 4653195 4653399 -197674948 - L1MB3 LINE L1 -381 5787 5503 356 261 8 0 chr4 4653530 4653649 -197674698 + (CCCA)n Simple_repeat Simple_repeat 3 122 0 955 137 11 0 chr4 4653702 4653877 -197674470 + (TCCA)n Simple_repeat Simple_repeat 3 179 0 198 0 0 0 chr4 4655932 4655954 -197672393 + (A)n Simple_repeat Simple_repeat 1 22 0 1429 188 41 0 chr4 4657417 4657688 -197670659 + AluJo SINE Alu 1 282 -30 333 0 0 0 chr4 4657691 4657728 -197670619 + (CA)n Simple_repeat Simple_repeat 2 38 0 331 246 123 43 chr4 4657897 4658035 -197670312 - L2 LINE L2 -4 3309 3161 1316 94 0 85 chr4 4658088 4658312 -197670035 - AluSg/x SINE Alu -3 309 105 566 217 7 43 chr4 4658328 4658466 -197669881 - AluSq/x SINE Alu -179 133 1 21 36 0 0 chr4 4658625 4658653 -197669694 + AT_rich Low_complexity Low_complexity 1 28 0 940 88 7 36 chr4 4658684 4658821 -197669526 - AluSq/x SINE Alu -179 133 1 1159 254 43 40 chr4 4658827 4659197 -197669150 + MLT1I LTR MaLR 39 409 0 185 340 64 21 chr4 4659422 4659516 -197668831 + MIR SINE MIR 163 260 -2 660 270 56 9 chr4 4659520 4659716 -197668631 - MIR SINE MIR -30 232 34 294 219 20 137 chr4 4659859 4660005 -197668342 - MLT1H LTR MaLR 0 549 421 232 278 14 14 chr4 4660186 4660258 -197668089 - MIR SINE MIR -157 105 34 208 235 15 15 chr4 4660342 4660410 -197667937 + (CATA)n Simple_repeat Simple_repeat 3 70 0 746 188 0 8 chr4 4660749 4660922 -197667425 - FLAM_C SINE Alu 0 172 1 281 293 53 0 chr4 4660992 4661067 -197667280 + MIR SINE MIR 119 197 -65 267 256 131 22 chr4 4661075 4661090 -197667257 + MIR3 SINE MIR 23 35 -173 2256 171 5 3 chr4 4661090 4661477 -197666870 - MLT1B LTR MaLR -2 388 1 267 256 131 22 chr4 4661477 4661598 -197666749 + MIR3 SINE MIR 35 174 -34 773 162 0 22 chr4 4662022 4662158 -197666189 - FLAM_A SINE Alu 0 133 1 248 306 58 40 chr4 4662387 4662560 -197665787 - L1MC/D LINE L1 -1910 5898 5723 204 179 74 28 chr4 4662561 4662650 -197665697 + MIR SINE MIR 93 253 -9 440 204 78 0 chr4 4662955 4663058 -197665289 - L2 LINE L2 0 3272 3162 2258 98 0 3 chr4 4663103 4663408 -197664939 + AluSx SINE Alu 1 304 -8 2069 131 0 0 chr4 4663821 4664112 -197664235 - AluSx SINE Alu -21 291 1 310 283 131 0 chr4 4664570 4664669 -197663678 + L2 LINE L2 3161 3272 0 804 207 62 43 chr4 4665164 4665372 -197662975 - MIR SINE MIR 0 262 51 1496 179 7 18 chr4 4665372 4665652 -197662695 - MLT1B LTR MaLR 0 390 114 255 311 29 19 chr4 4665672 4665775 -197662572 + MIR SINE MIR 117 220 -42 257 274 105 88 chr4 4665961 4666257 -197662090 + L2 LINE L2 2972 3272 0 339 303 103 12 chr4 4666356 4666521 -197661826 - L1ME4a LINE L1 -3 6118 5939 354 285 43 65 chr4 4666548 4666734 -197661613 - L1ME4a LINE L1 -157 5964 5783 278 371 101 3 chr4 4667371 4667659 -197660688 + L2 LINE L2 2915 3230 -42 1750 162 3 19 chr4 4667892 4668206 -197660141 + AluJo SINE Alu 1 309 -3 1852 233 90 32 chr4 4668433 4668990 -197659357 + MLT1E LTR MaLR 5 593 0 2177 101 0 3 chr4 4669159 4669456 -197658891 + AluSc SINE Alu 1 296 -13 253 257 14 14 chr4 4669737 4669811 -197658536 + LTR33A LTR ERVL 448 521 -2 285 253 66 22 chr4 4669813 4669904 -197658443 - L2 LINE L2 -41 3231 3137 467 193 34 39 chr4 4669953 4670080 -197658267 + MER69 DNA AcHobo 1 2467 -59 2195 96 6 13 chr4 4670102 4670414 -197657933 - AluSx SINE Alu -2 310 1 250 171 0 0 chr4 4670441 4670482 -197657865 + MER69 DNA AcHobo 2478 2518 -8 1759 188 115 65 chr4 4670943 4671437 -197656910 - MLT2B1 LTR ERVL 0 520 2 1729 114 16 75 chr4 4671437 4671743 -197656604 + AluSx SINE Alu 1 288 -24 2026 137 3 0 chr4 4671831 4672131 -197656216 + AluSp SINE Alu 1 301 -12 1098 275 45 27 chr4 4672266 4672640 -197655707 - LTR16C LTR ERVL 0 491 111 250 377 72 7 chr4 4672910 4673048 -197655299 + MIR SINE MIR 47 193 -69 415 261 22 22 chr4 4673774 4673866 -197654481 - MIR SINE MIR -86 122 31 307 325 87 8 chr4 4674150 4674276 -197654071 + MIR3 SINE MIR 60 195 -13 1104 149 0 2 chr4 4674276 4674618 -197653729 + (TCCA)n Simple_repeat Simple_repeat 1 521 0 226 320 60 33 chr4 4674833 4674983 -197653364 - MIR SINE MIR -25 237 84 625 216 227 0 chr4 4675021 4675197 -197653150 + MIR SINE MIR 45 260 -2 242 299 35 0 chr4 4675974 4676061 -197652286 + MIR SINE MIR 49 138 -124 1100 63 8 8 chr4 4676392 4676632 -197651715 + (TCTA)n Simple_repeat Simple_repeat 1 240 0 1207 197 42 11 chr4 4676649 4676913 -197651434 - AluJo SINE Alu -40 272 1 312 339 27 49 chr4 4677846 4678029 -197650318 - MIR3 SINE MIR -21 187 9 239 272 59 81 chr4 4678300 4678436 -197649911 + MIR SINE MIR 72 204 -58 515 264 83 7 chr4 4678554 4678698 -197649649 - L2 LINE L2 0 3313 3159 720 284 175 9 chr4 4678719 4679050 -197649297 - L2 LINE L2 -385 2929 2544 2330 136 25 0 chr4 4679406 4679766 -197648581 - L1PB1 LINE L1 0 6151 5783 1759 77 0 4 chr4 4679868 4680101 -197648246 - L1PB1 LINE L1 -375 5776 5545 2120 86 48 7 chr4 4680113 4680404 -197647943 - AluY SINE Alu -7 304 2 843 273 71 47 chr4 4680460 4680841 -197647506 - L1MEd LINE L1 -5719 400 11 513 270 43 37 chr4 4680893 4681056 -197647291 + MER5A DNA MER1_type 26 189 0 407 173 2 2 chr4 4681197 4681277 -197647070 - MER58 DNA MER1_type 0 2420 262 1925 137 3 0 chr4 4681351 4681636 -197646711 + AluSx SINE Alu 1 286 -26 534 129 0 0 chr4 4681636 4681721 -197646626 + (GGGA)n Simple_repeat Simple_repeat 2 86 0 2473 114 31 14 chr4 4682196 4682554 -197645793 + THE1B LTR MaLR 1 364 0 215 349 24 12 chr4 4683303 4683386 -197644961 - MIR SINE MIR -109 99 16 852 138 20 40 chr4 4683388 4683540 -197644807 + MLT1C LTR MaLR 15 163 -304 800 189 0 0 chr4 4683540 4683672 -197644675 - FRAM SINE Alu -8 168 37 1240 207 50 40 chr4 4683672 4683702 -197644645 + MLT1C LTR MaLR 157 185 -282 632 206 16 40 chr4 4683702 4683828 -197644519 + FLAM_A SINE Alu 1 123 -10 1240 207 50 40 chr4 4683828 4684096 -197644251 + MLT1C LTR MaLR 185 458 -9 964 244 129 58 chr4 4684215 4684650 -197643697 + MLT1J LTR MaLR 5 470 -41 360 173 0 0 chr4 4684782 4684857 -197643490 - L1MA10 LINE L1 -2 6332 6258 367 250 78 9 chr4 4684865 4684981 -197643366 - LTR40a LTR ERVL -353 166 43 783 288 105 27 chr4 4685139 4685549 -197642798 - LTR33 LTR ERVL -68 453 12 700 148 62 0 chr4 4686073 4686201 -197642146 + L1PA16 LINE L1 6028 6163 -3 256 340 10 20 chr4 4686554 4686654 -197641693 - MER5A DNA MER1_type -35 154 56 706 202 136 84 chr4 4687481 4687931 -197640416 - HAL1 LINE L1 -1187 1320 848 183 410 26 26 chr4 4687956 4688112 -197640235 + L2 LINE L2 2606 2761 -553 306 330 39 0 chr4 4688336 4688439 -197639908 - MIR SINE MIR -109 153 47 287 296 204 0 chr4 4689247 4689355 -197638992 + MIR3 SINE MIR 68 197 -11 846 274 36 4 chr4 4689868 4690120 -197638227 + MIR SINE MIR 3 262 0 231 248 78 23 chr4 4690566 4690695 -197637652 + L1M4 LINE L1 2915 3050 -3096 562 324 47 28 chr4 4690704 4690917 -197637430 + LTR16A LTR ERVL 1 217 -233 1272 221 50 16 chr4 4691216 4691538 -197636809 - MER74B LTR ERVL -79 543 211 237 204 0 0 chr4 4691575 4691624 -197636723 - MER74B LTR ERVL -573 49 1 539 201 22 22 chr4 4691651 4691785 -197636562 + LTR16A LTR ERVL 252 385 -65 2085 164 22 8 chr4 4691841 4692201 -197636146 - MLT1A1 LTR MaLR 0 365 1 345 285 30 6 chr4 4692214 4692379 -197635968 + L1M4 LINE L1 3094 3262 -2884 548 217 0 9 chr4 4692388 4692503 -197635844 + FLAM_C SINE Alu 24 137 -6 24 0 0 0 chr4 4692885 4692909 -197635438 + AT_rich Low_complexity Low_complexity 1 24 0 1707 171 24 0 chr4 4692928 4693215 -197635132 - AluSx SINE Alu -18 294 1 301 305 96 48 chr4 4693229 4693416 -197634931 - MIR SINE MIR -18 244 49 1109 220 33 11 chr4 4693657 4693930 -197634417 - MLT1C LTR MaLR -1 466 188 389 321 36 22 chr4 4694150 4694287 -197634060 + MIR SINE MIR 6 144 -118 259 222 48 16 chr4 4694510 4694573 -197633774 - MLT1K LTR MaLR -15 573 509 1485 206 71 52 chr4 4694684 4695059 -197633288 + Charlie4a DNA MER1_type 23 410 -1551 2060 113 0 3 chr4 4695059 4695350 -197632997 - AluSx SINE Alu -22 290 1 1485 206 71 52 chr4 4695350 4695451 -197632896 + Charlie4a DNA MER1_type 410 508 0 313 261 67 25 chr4 4695627 4695746 -197632601 + LTR16C LTR ERVL 261 384 -107 192 345 93 22 chr4 4695970 4696109 -197632238 - L2 LINE L2 -26 3287 3139 214 307 34 11 chr4 4696299 4696387 -197631960 + L2 LINE L2 2966 3055 -217 748 286 110 14 chr4 4696927 4697291 -197631056 + LTR16C LTR ERVL 93 491 0 244 303 40 0 chr4 4697581 4697657 -197630690 + MIR3 SINE MIR 89 167 -41 259 267 35 47 chr4 4697702 4697788 -197630559 + MIR SINE MIR 99 183 -79 743 238 99 46 chr4 4697961 4698095 -197630252 + MLT1C LTR MaLR 7 132 -258 2263 173 52 2 chr4 4698095 4698500 -197629847 - MSTB LTR MaLR 0 426 2 743 238 99 46 chr4 4698500 4698733 -197629614 + MLT1C LTR MaLR 132 375 -15 862 222 0 0 chr4 4698871 4699033 -197629314 - MER45A DNA AcHobo 0 178 17 199 231 0 19 chr4 4699249 4699301 -197629046 - MIR SINE MIR -138 70 20 408 271 33 8 chr4 4699377 4699499 -197628848 + MIR SINE MIR 102 226 -36 207 0 0 0 chr4 4700251 4700274 -197628073 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1739 232 18 8 chr4 4700277 4700669 -197627678 - L1MC2 LINE L1 -9 6335 5940 231 200 0 0 chr4 4701078 4701118 -197627229 + CT-rich Low_complexity Low_complexity 2 41 0 327 265 39 88 chr4 4701488 4701692 -197626655 + L2 LINE L2 2332 2525 -789 2123 177 9 0 chr4 4701966 4702299 -197626048 - MER1B DNA MER1_type 0 337 2 299 310 9 78 chr4 4703002 4703118 -197625229 - MIR SINE MIR -109 153 46 290 286 229 0 chr4 4703241 4703346 -197625001 - MIR3 SINE MIR -13 195 67 298 268 159 36 chr4 4703832 4703970 -197624377 + MIR SINE MIR 65 219 -43 1775 213 2 45 chr4 4704319 4704350 -197623997 - MLT2D LTR ERVL -10 404 373 282 56 0 0 chr4 4704350 4704386 -197623961 + (TG)n Simple_repeat Simple_repeat 1 36 0 1775 213 2 45 chr4 4704386 4704776 -197623571 - MLT2D LTR ERVL -41 373 1 301 240 54 70 chr4 4705611 4705677 -197622670 - MIR SINE MIR -11 251 186 2540 151 44 2 chr4 4705677 4706088 -197622259 + MSTA LTR MaLR 1 428 0 301 240 54 70 chr4 4706088 4706150 -197622197 - MIR SINE MIR -76 186 125 417 52 17 0 chr4 4706150 4706208 -197622139 + MSTA LTR MaLR 370 428 0 357 234 75 0 chr4 4706216 4706310 -197622037 - MIR SINE MIR -77 185 85 22 35 0 0 chr4 4706836 4706865 -197621482 + AT_rich Low_complexity Low_complexity 1 29 0 315 291 91 0 chr4 4706947 4707057 -197621290 + MIR SINE MIR 75 194 -68 481 255 41 107 chr4 4707408 4707604 -197620743 + MIR SINE MIR 16 198 -64 276 331 74 7 chr4 4708548 4708696 -197619651 + L2 LINE L2 2349 2506 -808 275 342 179 0 chr4 4708722 4708839 -197619508 - L2 LINE L2 -6 3266 3129 25 31 0 0 chr4 4709717 4709749 -197618598 + AT_rich Low_complexity Low_complexity 1 32 0 3292 109 82 25 chr4 4709813 4710384 -197617963 - MER4B LTR ERV1 -6 604 1 1408 239 55 97 chr4 4710407 4710775 -197617572 - L1ME2 LINE L1 -91 6073 5744 2701 112 43 24 chr4 4710775 4711195 -197617152 + MSTA LTR MaLR 1 428 0 1408 239 55 97 chr4 4711195 4711484 -197616863 - L1ME2 LINE L1 -420 5744 5444 231 322 35 56 chr4 4711568 4711711 -197616636 + MLT1K LTR MaLR 134 273 -315 552 314 114 43 chr4 4711988 4712338 -197616009 + L2 LINE L2 2897 3271 -1 746 269 123 8 chr4 4712442 4712835 -197615512 - LTR16C LTR ERVL -2 489 6 253 369 23 37 chr4 4712886 4713103 -197615244 + MIR SINE MIR 30 243 -19 231 290 93 9 chr4 4714512 4714619 -197613728 - MIR SINE MIR -112 150 35 293 317 48 0 chr4 4715339 4715443 -197612904 - MIR SINE MIR -104 158 50 264 300 200 4 chr4 4715515 4715755 -197612592 - L2 LINE L2 -160 3112 2826 3006 231 67 14 chr4 4715801 4716640 -197611707 + MER45B DNA AcHobo 110 992 -48 190 174 22 22 chr4 4716710 4716756 -197611591 + MIR SINE MIR 97 142 -66 401 316 53 21 chr4 4716771 4716958 -197611389 + MIR SINE MIR 1 193 -69 274 297 109 50 chr4 4716961 4717062 -197611285 + MIR SINE MIR 75 181 -81 22 0 0 0 chr4 4717116 4717138 -197611209 + AT_rich Low_complexity Low_complexity 1 22 0 1468 189 7 34 chr4 4717138 4717434 -197610913 - AluJb SINE Alu -24 288 1 482 165 0 0 chr4 4717649 4717728 -197610619 + MLT1A2 LTR MaLR 284 362 -12 2975 221 83 16 chr4 4717746 4718708 -197609639 + L1ME1 LINE L1 4834 5887 -279 2814 110 33 35 chr4 4718708 4719137 -197609210 + MSTC LTR MaLR 1 428 0 2975 221 83 16 chr4 4719137 4719434 -197608913 + L1ME1 LINE L1 5887 6163 -3 186 233 23 0 chr4 4719491 4719534 -197608813 - MIR SINE MIR -67 141 98 284 278 52 21 chr4 4719593 4719690 -197608657 - L2 LINE L2 -13 3300 3201 323 240 166 69 chr4 4719806 4720156 -197608191 + LTR33A LTR ERVL 3 386 -137 327 246 97 18 chr4 4721322 4721436 -197606911 - MLT1H LTR MaLR -3 546 424 832 283 32 18 chr4 4721436 4721719 -197606628 - L2 LINE L2 -886 2428 2142 631 279 14 40 chr4 4721843 4722065 -197606282 + Charlie8 DNA MER1_type 15 230 -2187 235 246 0 16 chr4 4722164 4722225 -197606122 + Charlie8 DNA MER1_type 2358 2417 0 324 203 0 40 chr4 4722969 4723043 -197605304 + MIR3 SINE MIR 93 163 -45 760 257 44 22 chr4 4723127 4723353 -197604994 + MIR SINE MIR 12 242 -20 769 223 76 6 chr4 4723437 4723825 -197604522 + MLT1C LTR MaLR 6 457 -10 255 342 52 11 chr4 4724006 4724155 -197604192 - MIR SINE MIR -75 133 7 197 113 38 94 chr4 4724216 4724269 -197604078 + L2 LINE L2 3264 3313 0 794 271 161 35 chr4 4725312 4725766 -197602581 - MLT1H LTR MaLR -17 532 22 2433 149 5 3 chr4 4725882 4726271 -197602076 - MLT1B LTR MaLR 0 390 1 1730 179 3 20 chr4 4727326 4727622 -197600725 + AluJo SINE Alu 1 291 -21 398 214 12 0 chr4 4728499 4728583 -197599764 - Tigger7 DNA MER2_type -6 2481 2397 * 1560 152 243 28 chr4 4728578 4729011 -197599336 - Tigger7 DNA MER2_type -1961 526 1 542 234 97 0 chr4 4729430 4729575 -197598772 + MIR SINE MIR 23 181 -81 363 267 0 0 chr4 4729799 4729874 -197598473 + MIR SINE MIR 71 145 -117 962 279 59 50 chr4 4729876 4730482 -197597865 + MLT2E LTR ERVL 1 612 -16 727 283 57 11 chr4 4730613 4730896 -197597451 - L1ME4a LINE L1 -267 5854 5559 1102 194 18 31 chr4 4732407 4732634 -197595713 - MER58A DNA MER1_type 0 224 1 474 268 65 22 chr4 4732808 4732946 -197595401 - MIR SINE MIR -97 165 22 320 233 207 7 chr4 4733174 4733324 -197595023 + MIR SINE MIR 77 256 -6 284 258 46 0 chr4 4733972 4734100 -197594247 - MIR3 SINE MIR -14 194 81 240 225 32 79 chr4 4735058 4735189 -197593158 - MIR SINE MIR -41 221 101 315 291 48 0 chr4 4736877 4736988 -197591359 + MIR SINE MIR 51 175 -33 219 220 0 0 chr4 4739989 4740039 -197588308 + A-rich Low_complexity Low_complexity 1 50 0 474 231 70 14 chr4 4740747 4740890 -197587457 + MIR SINE MIR 46 196 -66 252 248 266 9 chr4 4741467 4741580 -197586767 + MER5A DNA MER1_type 35 176 -13 191 262 24 0 chr4 4741815 4741857 -197586490 - L2 LINE L2 -19 3294 3252 264 192 77 0 chr4 4741911 4741963 -197586384 - MIR SINE MIR -138 124 69 294 338 74 26 chr4 4743327 4743718 -197584629 - L1ME4a LINE L1 -748 5398 4989 2850 13 0 0 chr4 4743724 4744033 -197584314 - AluYa5 SINE Alu -2 309 1 395 272 69 60 chr4 4745028 4745260 -197583087 - L2 LINE L2 -89 3183 2950 268 239 28 0 chr4 4745707 4745778 -197582569 - MIR3 SINE MIR -48 160 88 3486 184 41 15 chr4 4745870 4746598 -197581749 + L1MB5 LINE L1 5428 6174 0 1495 164 7 49 chr4 4746604 4746890 -197581457 + AluJo SINE Alu 3 276 -36 732 267 71 0 chr4 4747001 4747211 -197581136 - MIR SINE MIR -20 242 18 890 213 53 12 chr4 4747353 4747522 -197580825 - AluJo SINE Alu -136 176 1 2080 122 6 56 chr4 4747531 4747850 -197580497 - AluSx SINE Alu -9 303 1 238 302 0 16 chr4 4747910 4747973 -197580374 + MIR SINE MIR 201 262 0 1767 215 111 39 chr4 4748000 4748539 -197579808 - MLT1G1 LTR MaLR -12 583 6 252 369 141 0 chr4 4748613 4748811 -197579536 + MIR SINE MIR 31 256 -6 260 236 107 8 chr4 4749448 4749578 -197578769 + MIR SINE MIR 97 243 -19 467 236 189 40 chr4 4749586 4749725 -197578622 + MIR SINE MIR 10 127 -135 1935 146 0 54 chr4 4749725 4750041 -197578306 + AluJb SINE Alu 1 299 -13 467 236 189 40 chr4 4750041 4750113 -197578234 + MIR SINE MIR 127 259 -3 2027 158 0 13 chr4 4750245 4750561 -197577786 - AluJb SINE Alu 0 312 1 1144 206 71 0 chr4 4750569 4750851 -197577496 - L1MD2 LINE L1 -1 6358 6057 2097 111 0 0 chr4 4750901 4751172 -197577175 + AluSx SINE Alu 1 271 -41 2175 52 4 17 chr4 4751177 4751701 -197576646 + LTR10C LTR ERV1 11 591 0 204 97 0 0 chr4 4751716 4751747 -197576600 + (A)n Simple_repeat Simple_repeat 1 31 0 395 252 112 7 chr4 4751787 4751930 -197576417 + MIR SINE MIR 2 159 -103 262 290 12 0 chr4 4752002 4752101 -197576246 - MIR SINE MIR -75 133 33 394 299 222 14 chr4 4752141 4752348 -197575999 + MIR SINE MIR 13 262 0 26 0 0 0 chr4 4752384 4752410 -197575937 + AT_rich Low_complexity Low_complexity 1 26 0 207 319 14 0 chr4 4753759 4753831 -197574516 + MIR SINE MIR 67 139 -123 2859 16 0 0 chr4 4754761 4755072 -197573275 - AluYa5 SINE Alu 0 311 1 395 272 69 60 chr4 4756067 4756299 -197572048 - L2 LINE L2 -89 3183 2950 268 239 28 0 chr4 4756746 4756817 -197571530 - MIR3 SINE MIR -48 160 88 3486 184 41 15 chr4 4756909 4757637 -197570710 + L1MB5 LINE L1 5428 6174 0 1495 164 7 49 chr4 4757643 4757929 -197570418 + AluJo SINE Alu 3 276 -36 732 267 71 0 chr4 4758040 4758250 -197570097 - MIR SINE MIR -20 242 18 263 266 25 13 chr4 4759146 4759225 -197569122 - MIR SINE MIR -64 144 65 272 204 0 19 chr4 4759591 4759645 -197568702 + MIR SINE MIR 58 110 -152 610 198 87 17 chr4 4759762 4759934 -197568413 + MIR SINE MIR 65 248 -14 318 287 0 0 chr4 4759976 4760119 -197568228 + (CAT)n Simple_repeat Simple_repeat 1 143 0 657 230 0 0 chr4 4760172 4760350 -197567997 + (CAT)n Simple_repeat Simple_repeat 2 179 0 693 247 0 0 chr4 4760379 4760720 -197567627 + (CAT)n Simple_repeat Simple_repeat 1 341 0 396 211 0 26 chr4 4760732 4760888 -197567459 + (CAT)n Simple_repeat Simple_repeat 1 152 0 942 185 58 5 chr4 4761306 4761495 -197566852 - MLT1B LTR MaLR 0 390 192 612 185 80 25 chr4 4761575 4761737 -197566610 - MLT1B LTR MaLR -217 173 3 678 329 40 9 chr4 4761751 4761976 -197566371 - MIR SINE MIR -11 251 20 3517 176 97 130 chr4 4762098 4762212 -197566135 + Charlie1a DNA MER1_type 85 201 -2560 1446 6 0 0 chr4 4762212 4762375 -197565972 + (CTATG)n Simple_repeat Simple_repeat 3 165 0 3517 176 97 130 chr4 4762375 4762905 -197565442 + Charlie1a DNA MER1_type 201 747 -2014 2242 110 0 3 chr4 4762905 4763195 -197565152 - AluSc SINE Alu -20 289 1 3517 176 97 130 chr4 4763195 4763924 -197564423 + Charlie1a DNA MER1_type 747 1414 -1347 2296 125 0 0 chr4 4763924 4764227 -197564120 + AluSx SINE Alu 1 303 -9 3517 176 97 130 chr4 4764227 4764268 -197564079 + Charlie1a DNA MER1_type 1414 1455 0 189 297 27 14 chr4 4764274 4764348 -197563999 - MIR SINE MIR -119 143 69 557 270 94 60 chr4 4764393 4764711 -197563636 + LTR16A LTR ERVL 76 404 -46 389 184 26 0 chr4 4765229 4765305 -197563042 + MIR SINE MIR 111 188 -74 313 289 118 7 chr4 4766004 4766139 -197562208 - L3 LINE CR1 -3 1574 1425 219 216 0 0 chr4 4766435 4766472 -197561875 - L2 LINE L2 -91 3181 3145 490 242 67 36 chr4 4766570 4766735 -197561612 + MIR SINE MIR 22 191 -71 634 249 30 18 chr4 4767198 4767367 -197560980 + MIR SINE MIR 22 192 -70 727 304 98 23 chr4 4767611 4767957 -197560390 + L3 LINE CR1 1204 1575 -2 1148 261 112 8 chr4 4767984 4768378 -197559969 - MLT1J2 LTR MaLR -3 447 13 329 289 125 0 chr4 4768416 4768520 -197559827 - L2 LINE L2 0 3272 3156 183 242 97 0 chr4 4768640 4768702 -197559645 + MIR SINE MIR 105 172 -90 221 315 33 11 chr4 4769165 4769257 -197559090 - MIR SINE MIR -122 140 47 383 269 187 8 chr4 4769478 4769612 -197558735 + MIR SINE MIR 4 161 -101 331 299 173 16 chr4 4770203 4770330 -197558017 - L2 LINE L2 -3 3269 3123 346 263 76 42 chr4 4770343 4770461 -197557886 + MIR SINE MIR 80 201 -61 311 276 51 27 chr4 4770870 4771009 -197557338 + MIR SINE MIR 16 154 -65 369 288 54 9 chr4 4771058 4771169 -197557178 + L2 LINE L2 3193 3308 -5 218 200 25 0 chr4 4771171 4771211 -197557136 + L2 LINE L2 3230 3270 -2 208 347 13 13 chr4 4771306 4771381 -197556966 - MIR SINE MIR -64 144 70 540 279 79 70 chr4 4771461 4771877 -197556470 - MLT1L LTR MaLR 0 615 196 327 299 31 20 chr4 4772075 4772213 -197556134 - MIR SINE MIR -67 141 16 495 195 108 104 chr4 4772538 4772825 -197555522 + L1MC4 LINE L1 7626 7913 -129 3678 161 63 6 chr4 4772868 4773531 -197554816 + MER44D DNA MER2_type 5 705 0 244 120 40 0 chr4 4773553 4773603 -197554744 + (CATATA)n Simple_repeat Simple_repeat 5 56 0 285 258 62 55 chr4 4773623 4773751 -197554596 + L1MC4 LINE L1 7914 8042 0 27 0 0 0 chr4 4773756 4773783 -197554564 + AT_rich Low_complexity Low_complexity 1 27 0 387 0 0 0 chr4 4774210 4774253 -197554094 + (CA)n Simple_repeat Simple_repeat 1 43 0 240 230 40 27 chr4 4775014 4775088 -197553259 + L2 LINE L2 2909 2983 -289 456 244 0 0 chr4 4775377 4775467 -197552880 - MIR SINE MIR -103 159 70 469 281 64 41 chr4 4775820 4775991 -197552356 + MER63A DNA MER1_type 1 175 -35 314 270 9 52 chr4 4776023 4776138 -197552209 - MIR SINE MIR -81 181 72 236 231 0 19 chr4 4776376 4776428 -197551919 - MIR SINE MIR -108 100 50 1564 215 55 25 chr4 4776731 4777094 -197551253 + MLT1A2 LTR MaLR 1 374 0 1786 157 168 8 chr4 4777358 4777727 -197550620 + MSTA LTR MaLR 1 428 0 9598 117 19 38 chr4 4777730 4779332 -197549015 + MSTA-int LTR MaLR 4 1575 -5 1895 164 143 11 chr4 4779344 4779722 -197548625 + MSTA LTR MaLR 1 428 0 709 293 57 51 chr4 4779746 4779954 -197548393 - MLT1J LTR MaLR -157 354 142 872 110 0 52 chr4 4779954 4780090 -197548257 + FLAM_C SINE Alu 5 133 0 709 293 57 51 chr4 4780090 4780233 -197548114 - MLT1J LTR MaLR -369 142 1 199 263 0 0 chr4 4780845 4780883 -197547464 + L2 LINE L2 3251 3288 -25 226 269 39 26 chr4 4780944 4781022 -197547325 + MIR SINE MIR 184 262 0 450 295 126 46 chr4 4781057 4781342 -197547005 - L2 LINE L2 0 3272 2965 709 242 66 16 chr4 4782978 4783169 -197545178 + MIR3 SINE MIR 1 201 -7 670 223 0 17 chr4 4783181 4783473 -197544874 + (ATGGTG)n Simple_repeat Simple_repeat 1 287 0 843 204 0 0 chr4 4783475 4783711 -197544636 + (TGG)n Simple_repeat Simple_repeat 1 236 0 243 204 0 0 chr4 4783733 4783787 -197544560 + (TGG)n Simple_repeat Simple_repeat 2 55 0 374 314 72 42 chr4 4783808 4784044 -197544303 - MIR SINE MIR -19 243 1 193 362 48 19 chr4 4784244 4784349 -197543998 + L2 LINE L2 2649 2756 -558 192 348 43 17 chr4 4784415 4784530 -197543817 + L2 LINE L2 2871 2988 -284 424 265 55 61 chr4 4784676 4784857 -197543490 + MIR SINE MIR 13 192 -70 1917 166 13 7 chr4 4785247 4785549 -197542798 - AluJb SINE Alu -8 304 1 201 283 208 9 chr4 4785842 4785948 -197542399 - MIR3 SINE MIR -52 156 30 360 255 145 86 chr4 4786250 4786678 -197541669 - MLT1J LTR MaLR -58 453 1 292 273 61 11 chr4 4786926 4787050 -197541297 + MIR SINE MIR 38 166 -59 4251 274 68 31 chr4 4787050 4787282 -197541065 + L1ME1 LINE L1 22 244 -6152 1586 214 97 3 chr4 4787282 4787642 -197540705 - MSTD LTR MaLR 0 396 3 4251 274 68 31 chr4 4787642 4789401 -197538946 + L1ME1 LINE L1 244 2086 -4310 2293 245 76 27 chr4 4789404 4789956 -197538391 + L1ME1 LINE L1 4923 5446 -789 1413 199 40 34 chr4 4789956 4790252 -197538095 + AluJo SINE Alu 5 302 -10 2293 245 76 27 chr4 4790252 4790959 -197537388 + L1ME1 LINE L1 5446 6230 -5 769 248 36 18 chr4 4791104 4791356 -197536991 - MIR SINE MIR 0 262 6 1613 132 53 64 chr4 4791910 4792225 -197536122 + AluSx SINE Alu 5 316 0 2494 191 48 4 chr4 4792579 4793062 -197535285 + MLT1D LTR MaLR 1 504 -1 571 299 107 14 chr4 4793228 4793509 -197534838 + LTR16A LTR ERVL 113 419 -31 682 172 86 32 chr4 4793826 4794012 -197534335 + MLT1H1 LTR MaLR 360 555 0 340 285 30 35 chr4 4794142 4794310 -197534037 - MIR SINE MIR -18 244 76 296 296 11 0 chr4 4794336 4794424 -197533923 - L2 LINE L2 0 3313 3225 184 295 45 45 chr4 4794434 4794546 -197533801 - L2 LINE L2 -205 3108 2997 273 278 204 0 chr4 4794897 4795005 -197533342 + MIR SINE MIR 23 152 -110 319 294 84 0 chr4 4795152 4795271 -197533076 - L2 LINE L2 0 3272 3144 187 333 107 0 chr4 4795315 4795399 -197532948 - L2 LINE L2 -248 3024 2932 236 335 143 11 chr4 4795450 4795632 -197532715 - L2 LINE L2 -508 2806 2601 407 240 224 22 chr4 4795636 4795815 -197532532 - L2 LINE L2 0 3313 3099 263 240 74 25 chr4 4796182 4796303 -197532044 - L1ME3 LINE L1 -8 6154 6028 217 296 67 137 chr4 4796649 4796933 -197531414 + L2 LINE L2 2943 3206 -66 491 273 86 0 chr4 4797312 4797440 -197530907 + MIR SINE MIR 35 173 -89 21 0 0 0 chr4 4798099 4798120 -197530227 + AT_rich Low_complexity Low_complexity 1 21 0 229 258 61 0 chr4 4798290 4798356 -197529991 - MIR SINE MIR -78 184 115 187 227 0 91 chr4 4799089 4799155 -197529192 + MIR SINE MIR 64 123 -139 412 274 49 97 chr4 4799328 4799554 -197528793 + L2 LINE L2 3027 3241 -31 2067 171 28 6 chr4 4799554 4799911 -197528436 + MLT1A1 LTR MaLR 1 365 0 185 65 32 0 chr4 4799941 4799972 -197528375 + (TGAA)n Simple_repeat Simple_repeat 3 34 0 296 296 22 44 chr4 4799973 4800108 -197528239 - MIR SINE MIR -78 184 53 649 299 124 39 chr4 4801050 4801485 -197526862 + L2 LINE L2 2216 2687 -627 535 296 77 6 chr4 4801553 4801722 -197526625 - MIR SINE MIR -19 243 63 252 231 0 0 chr4 4802167 4802219 -197526128 + L1MB1 LINE L1 6119 6170 -19 408 173 0 36 chr4 4802225 4802335 -197526012 + GA-rich Low_complexity Low_complexity 4 109 0 485 242 22 67 chr4 4802352 4802530 -197525817 - MIR3 SINE MIR -9 199 30 7820 123 15 7 chr4 4803569 4805589 -197522758 + L1PA8A LINE L1 4095 6131 0 290 198 74 12 chr4 4805668 4805749 -197522598 + MIR SINE MIR 105 190 -72 273 281 0 62 chr4 4806060 4806156 -197522191 - MIR3 SINE MIR -32 176 87 2212 139 71 15 chr4 4806185 4806452 -197521895 - MSTB1 LTR MaLR -14 418 120 2700 101 0 5 chr4 4806452 4806827 -197521520 + THE1C LTR MaLR 3 375 0 2212 139 71 15 chr4 4806827 4806955 -197521392 - MSTB1 LTR MaLR -312 120 1 185 247 104 52 chr4 4807421 4807498 -197520849 + L2 LINE L2 3208 3288 -25 359 235 82 0 chr4 4809287 4809385 -197518962 - MIR SINE MIR -109 153 48 385 228 66 81 chr4 4809758 4809894 -197518453 + MIR SINE MIR 2 135 -127 317 291 10 10 chr4 4810758 4810861 -197517486 + MIR SINE MIR 77 179 -83 585 222 16 16 chr4 4810903 4811029 -197517318 + MIR SINE MIR 23 148 -114 1983 154 128 8 chr4 4811037 4811419 -197516928 + MSTA LTR MaLR 1 428 0 7867 168 45 36 chr4 4811419 4813056 -197515291 + MSTA-int LTR MaLR 1 1651 0 1952 135 141 8 chr4 4813056 4813433 -197514914 + MSTA LTR MaLR 1 427 -1 252 363 40 45 chr4 4813457 4813680 -197514667 - MIR SINE MIR -31 231 10 213 39 0 0 chr4 4814062 4814088 -197514259 + (TTCA)n Simple_repeat Simple_repeat 2 27 0 3763 157 21 30 chr4 4814171 4814938 -197513409 + L1MB3 LINE L1 5422 6181 -2 2710 90 0 6 chr4 4815091 4815457 -197512890 - THE1B LTR MaLR 0 364 1 224 161 138 46 chr4 4815525 4815612 -197512735 - MER5A DNA MER1_type -81 108 14 248 163 0 0 chr4 4815719 4815762 -197512585 - MLT2C2 LTR ERVL -2 462 420 232 109 18 18 chr4 4815765 4815820 -197512527 + (TC)n Simple_repeat Simple_repeat 2 56 0 * 314 289 7 0 chr4 4815817 4815966 -197512381 + (TCCA)n Simple_repeat Simple_repeat 3 152 0 * 429 195 11 38 chr4 4815940 4816125 -197512222 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 2466 81 0 0 chr4 4816164 4816460 -197511887 - AluY SINE Alu -13 298 3 2014 174 56 5 chr4 4816467 4816857 -197511490 - MLT2C2 LTR ERVL -50 414 5 394 293 45 19 chr4 4816864 4817021 -197511326 + MIR SINE MIR 73 233 -29 1448 243 91 7 chr4 4817615 4818034 -197510313 + MLT1C LTR MaLR 6 459 -8 206 215 46 31 chr4 4818256 4818321 -197510026 + L2 LINE L2 3236 3301 -12 395 178 22 40 chr4 4818644 4818875 -197509472 + CT-rich Low_complexity Low_complexity 1 227 0 277 255 57 28 chr4 4819901 4820007 -197508340 - MIR SINE MIR -63 145 37 236 212 45 15 chr4 4820020 4820086 -197508261 - L3 LINE CR1 -667 910 843 355 311 106 8 chr4 4820116 4820380 -197507967 - L1ME4a LINE L1 0 6121 5832 219 214 0 0 chr4 4820396 4820438 -197507909 - MIR SINE MIR -14 248 207 1813 120 53 25 chr4 4820551 4820834 -197507513 - AluJb SINE Alu -21 291 1 1295 203 77 40 chr4 4820904 4821073 -197507274 + MLT1B LTR MaLR 1 162 -228 2148 71 15 4 chr4 4821073 4821342 -197507005 + AluY SINE Alu 1 272 -39 1295 203 77 40 chr4 4821342 4821547 -197506800 + MLT1B LTR MaLR 162 389 -1 448 252 8 0 chr4 4821548 4821671 -197506676 + L1MA10 LINE L1 6204 6327 -7 445 258 104 16 chr4 4821852 4822034 -197506313 + MIR SINE MIR 63 260 -2 181 255 0 43 chr4 4822154 4822201 -197506146 - MER5A DNA MER1_type -5 184 140 418 143 12 0 chr4 4822211 4822295 -197506052 - L1PB2 LINE L1 0 6151 6067 2183 96 0 0 chr4 4822299 4822600 -197505747 + L1PB1 LINE L1 5823 6123 -28 1280 108 36 0 chr4 4822611 4822805 -197505542 - L1PB2 LINE L1 -366 5785 5585 427 303 75 11 chr4 4823088 4823276 -197505071 - MIR SINE MIR -62 200 1 5914 195 17 15 chr4 4823386 4824607 -197503740 + L1MC1 LINE L1 4285 5503 -830 2164 147 28 19 chr4 4824607 4824968 -197503379 - THE1B LTR MaLR 0 364 1 5914 195 17 15 chr4 4824968 4825504 -197502843 + L1MC1 LINE L1 5503 6049 -284 2015 164 3 0 chr4 4825504 4825814 -197502533 + AluJb SINE Alu 1 311 -1 5914 195 17 15 chr4 4825814 4826097 -197502250 + L1MC1 LINE L1 6049 6330 -3 944 246 87 48 chr4 4826107 4826338 -197502009 - MLT1I LTR MaLR 0 409 158 1955 174 0 0 chr4 4826338 4826631 -197501716 - AluJo SINE Alu -19 293 1 944 246 87 48 chr4 4826631 4826756 -197501591 - MLT1I LTR MaLR -251 158 39 251 375 10 0 chr4 4827038 4827142 -197501205 + MIR SINE MIR 41 145 -63 296 322 26 0 chr4 4827288 4827403 -197500944 + Charlie8 DNA MER1_type 118 235 -2182 353 265 8 8 chr4 4827568 4827827 -197500520 + (TG)n Simple_repeat Simple_repeat 1 259 0 229 238 0 32 chr4 4828689 4828752 -197499595 + (CAGAGA)n Simple_repeat Simple_repeat 3 63 0 229 118 39 0 chr4 4828756 4828807 -197499540 + GA-rich Low_complexity Low_complexity 1 53 0 297 311 60 20 chr4 4829402 4829553 -197498794 - MIR SINE MIR -54 208 52 442 257 164 13 chr4 4829701 4829853 -197498494 - MER5A DNA MER1_type -6 183 9 368 287 49 18 chr4 4830042 4830206 -197498141 + MIR SINE MIR 20 188 -74 992 224 38 19 chr4 4830214 4830477 -197497870 - MLT1C LTR MaLR 0 467 200 542 278 25 0 chr4 4830966 4831128 -197497219 - MER5A DNA MER1_type 0 189 24 237 327 40 40 chr4 4831123 4831224 -197497123 - MIR SINE MIR -91 171 71 * 1869 124 4 18 chr4 4831730 4832005 -197496342 + AluSx SINE Alu 41 311 -1 283 224 0 0 chr4 4832732 4832790 -197495557 + MIR SINE MIR 62 119 -143 191 146 24 0 chr4 4833156 4833197 -197495150 + (TGGG)n Simple_repeat Simple_repeat 3 44 0 227 254 53 30 chr4 4833784 4833885 -197494462 - MIR SINE MIR -58 150 47 226 234 0 0 chr4 4834243 4834290 -197494057 + MIR SINE MIR 107 153 -109 1276 216 41 84 chr4 4834482 4834968 -197493379 + MLT1C LTR MaLR 1 465 -2 2189 106 0 11 chr4 4835156 4835467 -197492880 + AluSx SINE Alu 3 310 0 2294 111 0 0 chr4 4835544 4835841 -197492506 - AluSx SINE Alu -15 297 1 284 300 114 14 chr4 4836320 4836460 -197491887 + MIR SINE MIR 59 212 -50 236 271 59 0 chr4 4836579 4836664 -197491683 + MIR SINE MIR 109 198 -64 252 298 58 41 chr4 4837427 4837548 -197490799 + MIR SINE MIR 78 200 -62 427 223 35 24 chr4 4837684 4837844 -197490503 - MIR SINE MIR 0 262 100 923 60 0 0 chr4 4837890 4838007 -197490340 + FLAM_C SINE Alu 1 117 -16 1175 269 71 35 chr4 4838007 4838526 -197489821 - L2 LINE L2 -6 3307 2776 190 342 51 0 chr4 4838723 4838802 -197489545 + MIR SINE MIR 98 180 -82 385 268 45 45 chr4 4838872 4839029 -197489318 - MIR SINE MIR -85 177 21 279 276 35 11 chr4 4839683 4839770 -197488577 + MIR3 SINE MIR 82 170 -38 1898 156 7 13 chr4 4839785 4840092 -197488255 + AluJo SINE Alu 1 305 -7 342 297 130 0 chr4 4840567 4840705 -197487642 + MIR SINE MIR 105 260 -2 217 357 84 7 chr4 4841170 4841324 -197487023 + MIR SINE MIR 49 214 -48 299 344 58 7 chr4 4841621 4841775 -197486572 + MIR3 SINE MIR 25 186 -22 262 0 26 26 chr4 4841776 4841815 -197486532 + (TTTTG)n Simple_repeat Simple_repeat 4 42 0 1679 127 27 60 chr4 4843921 4844221 -197484126 - AluJo SINE Alu -13 299 10 511 290 32 68 chr4 4844291 4844539 -197483808 + MIR SINE MIR 20 258 -4 1206 122 0 0 chr4 4846985 4847181 -197481166 + Tigger4(Zombi) DNA MER2_type 2479 2674 -57 1083 206 50 52 chr4 4847185 4847549 -197480798 + THE1C LTR MaLR 1 363 -12 189 154 0 0 chr4 4848903 4848942 -197479405 + (CA)n Simple_repeat Simple_repeat 1 39 0 820 247 94 66 chr4 4849721 4850076 -197478271 + MLT1D LTR MaLR 24 397 -108 2160 125 0 3 chr4 4850076 4850371 -197477976 - AluSx SINE Alu -18 294 1 820 247 94 66 chr4 4850371 4850484 -197477863 + MLT1D LTR MaLR 397 505 0 479 216 58 29 chr4 4850561 4850774 -197477573 - L1M LINE L1 -740 5424 5207 1080 180 149 34 chr4 4851285 4851580 -197476767 - THE1C LTR MaLR -46 329 1 520 343 30 4 chr4 4851850 4852121 -197476226 + L1MC4 LINE L1 6446 6723 -1319 181 219 0 109 chr4 4853073 4853137 -197475210 - MIR3 SINE MIR 0 208 152 901 259 214 5 chr4 4853168 4853551 -197474796 - L2 LINE L2 0 3313 2851 21 0 0 0 chr4 4854126 4854147 -197474200 + AT_rich Low_complexity Low_complexity 1 21 0 303 289 10 10 chr4 4854672 4854769 -197473578 + L1M4 LINE L1 4923 5019 -1127 2158 89 25 0 chr4 4854778 4855059 -197473288 + AluSp SINE Alu 1 288 -25 244 279 55 33 chr4 4855078 4855151 -197473196 + L1M4 LINE L1 5010 5080 -1066 2352 100 0 6 chr4 4855151 4855462 -197472885 - AluY SINE Alu -2 309 1 244 279 55 33 chr4 4855462 4855571 -197472776 + L1M4 LINE L1 5080 5196 -950 563 203 42 10 chr4 4855682 4855894 -197472453 + L1M4 LINE L1 5207 5424 -740 1027 240 92 63 chr4 4855971 4856084 -197472263 - MLT1D LTR MaLR 0 505 397 2160 125 0 3 chr4 4856084 4856379 -197471968 + AluSx SINE Alu 1 294 -18 1027 240 92 63 chr4 4856379 4856756 -197471591 - MLT1D LTR MaLR -108 397 1 3415 130 65 25 chr4 4857521 4858036 -197470311 - MER51A LTR ERV1 -9 625 81 2322 96 0 0 chr4 4858036 4858328 -197470019 - AluSq SINE Alu -21 292 1 3415 130 65 25 chr4 4858328 4858413 -197469934 - MER51A LTR ERV1 -553 81 1 1281 122 0 21 chr4 4858611 4858799 -197469548 - FRAM SINE Alu 0 176 1 340 200 147 36 chr4 4858932 4859071 -197469276 + MIR SINE MIR 2 153 -66 257 250 10 52 chr4 4859274 4859370 -197468977 + MIR SINE MIR 109 200 -62 351 113 0 0 chr4 4859418 4859471 -197468876 + (TTA)n Simple_repeat Simple_repeat 1 53 0 1207 289 36 31 chr4 4860187 4860624 -197467723 - MLT1J LTR MaLR 0 511 38 339 261 89 52 chr4 4860710 4860849 -197467498 + MIR SINE MIR 4 146 -66 731 171 0 0 chr4 4861037 4861175 -197467172 - FRAM SINE Alu 0 166 29 219 231 0 0 chr4 4861313 4861352 -197466995 - MER5A DNA MER1_type -90 99 61 1952 117 4 0 chr4 4861421 4861677 -197466670 + AluSx SINE Alu 1 257 -55 210 37 0 0 chr4 4861683 4861710 -197466637 + (CAAA)n Simple_repeat Simple_repeat 3 29 0 817 150 0 8 chr4 4861719 4861839 -197466508 - AluJb SINE Alu -84 228 110 726 139 0 0 chr4 4861953 4862068 -197466279 + AluSp/q SINE Alu 193 307 -6 480 146 9 27 chr4 4862068 4862178 -197466169 + GA-rich Low_complexity Low_complexity 1 108 0 189 0 0 0 chr4 4862906 4862927 -197465420 + (TTA)n Simple_repeat Simple_repeat 1 21 0 280 306 8 24 chr4 4863646 4863770 -197464577 + GA-rich Low_complexity Low_complexity 4 125 0 22 80 0 0 chr4 4864142 4864192 -197464155 + GC_rich Low_complexity Low_complexity 1 50 0 25 65 0 0 chr4 4864349 4864395 -197463952 + GC_rich Low_complexity Low_complexity 1 46 0 22 35 0 0 chr4 4865683 4865712 -197462635 + GC_rich Low_complexity Low_complexity 1 29 0 209 93 70 0 chr4 4865831 4865874 -197462473 + T-rich Low_complexity Low_complexity 3 48 0 236 309 40 92 chr4 4866840 4866992 -197461355 + MIR SINE MIR 119 262 0 361 257 20 61 chr4 4867685 4867833 -197460514 - MIR3 SINE MIR -26 182 41 351 65 0 0 chr4 4867917 4867963 -197460384 + (A)n Simple_repeat Simple_repeat 1 46 0 21 0 0 0 chr4 4868122 4868143 -197460204 + AT_rich Low_complexity Low_complexity 1 21 0 27 81 0 0 chr4 4868222 4868284 -197460063 + AT_rich Low_complexity Low_complexity 1 62 0 221 246 35 0 chr4 4869920 4869977 -197458370 + MIR3 SINE MIR 98 156 -52 22 106 0 0 chr4 4870299 4870384 -197457963 + GC_rich Low_complexity Low_complexity 1 85 0 319 350 34 0 chr4 4870890 4871007 -197457340 - MIR SINE MIR -122 140 20 23 54 0 0 chr4 4871683 4871720 -197456627 + GC_rich Low_complexity Low_complexity 1 37 0 356 239 17 39 chr4 4872100 4872280 -197456067 + (CA)n Simple_repeat Simple_repeat 1 176 0 405 293 88 7 chr4 4873114 4873261 -197455086 + MIR SINE MIR 33 191 -71 382 326 79 26 chr4 4874321 4874548 -197453799 - MIR SINE MIR -6 256 18 412 224 84 0 chr4 4874913 4875020 -197453327 - MIR SINE MIR -66 196 81 192 251 57 32 chr4 4875288 4875382 -197452965 - MIR SINE MIR -55 153 56 292 309 122 26 chr4 4875432 4875662 -197452685 - L2 LINE L2 -136 3177 2926 346 324 20 0 chr4 4876302 4876450 -197451897 - MIR SINE MIR -36 226 76 277 225 56 0 chr4 4876468 4876539 -197451808 + MER96 DNA MER1_type? 20 94 -81 257 304 16 11 chr4 4876797 4876976 -197451371 - MIR SINE MIR -19 243 65 2028 238 97 54 chr4 4878552 4879431 -197448916 + MER45C DNA AcHobo 5 953 0 289 254 182 39 chr4 4879997 4880178 -197448169 + L2 LINE L2 3107 3313 0 388 272 7 37 chr4 4880309 4880445 -197447902 - L2 LINE L2 -11 3302 3171 22 0 0 0 chr4 4880510 4880532 -197447815 + AT_rich Low_complexity Low_complexity 1 22 0 1057 139 0 17 chr4 4880687 4880860 -197447487 - L1PA8 LINE L1 -8 6164 5995 2113 102 0 54 chr4 4880879 4881192 -197447155 - AluSx SINE Alu -16 296 1 394 325 8 0 chr4 4881197 4881320 -197447027 - MIR SINE MIR -118 144 21 984 291 91 20 chr4 4881381 4881875 -197446472 + L2 LINE L2 2783 3312 -1 2046 126 0 36 chr4 4881878 4882187 -197446160 - AluSx SINE Alu -14 298 1 803 244 16 51 chr4 4882802 4883056 -197445291 + MIR SINE MIR 3 247 -15 280 333 56 43 chr4 4883209 4883371 -197444976 - MIR SINE MIR -76 186 23 2124 138 0 3 chr4 4883793 4884084 -197444263 - AluJb SINE Alu -22 290 1 266 265 72 66 chr4 4884094 4884275 -197444072 - MIR SINE MIR -73 189 8 35 54 0 0 chr4 4884822 4884878 -197443469 + AT_rich Low_complexity Low_complexity 1 56 0 2206 287 65 14 chr4 4884963 4885844 -197442503 - HAL1 LINE L1 0 2507 1582 530 251 151 0 chr4 4885876 4886075 -197442272 - HAL1 LINE L1 -976 1531 1303 2091 180 30 13 chr4 4886078 4886473 -197441874 + Tigger4(Zombi) DNA MER2_type 1 402 -2329 2301 101 0 0 chr4 4886478 4886774 -197441573 + AluSq SINE Alu 1 296 -17 25 31 0 0 chr4 4886774 4886806 -197441541 + AT_rich Low_complexity Low_complexity 1 32 0 2067 161 50 48 chr4 4886806 4887267 -197441080 + Tigger4(Zombi) DNA MER2_type 392 853 -1878 703 192 8 0 chr4 4887267 4887392 -197440955 + AluJ SINE Alu 1 126 -186 819 206 16 38 chr4 4887606 4887790 -197440557 + AluJ SINE Alu 116 295 -17 1263 141 0 0 chr4 4887790 4887981 -197440366 + AluSc SINE Alu 119 309 0 2482 142 21 16 chr4 4887998 4888421 -197439926 + Tigger4(Zombi) DNA MER2_type 829 1253 -1478 889 144 0 0 chr4 4888456 4888574 -197439773 - FLAM_C SINE Alu -25 118 1 5501 131 24 11 chr4 4888576 4888640 -197439707 + Tigger4(Zombi) DNA MER2_type 1237 1299 -1432 1583 183 72 11 chr4 4888640 4888942 -197439405 - AluJo SINE Alu 0 312 1 5501 131 24 11 chr4 4888942 4889789 -197438558 + Tigger4(Zombi) DNA MER2_type 1299 2160 -571 975 79 9 2 chr4 4889827 4890086 -197438261 + AluSx SINE Alu 1 306 0 1439 148 52 20 chr4 4890096 4890401 -197437946 + Tigger4(Zombi) DNA MER2_type 2178 2492 -239 2588 117 2 8 chr4 4890538 4890939 -197437408 - L1P LINE L1 -5745 401 3 248 208 31 39 chr4 4890940 4891070 -197437277 - L1MEc LINE L1 -2185 4030 3902 472 151 54 0 chr4 4891070 4891163 -197437184 - MSTB LTR MaLR 0 426 329 2825 206 20 43 chr4 4891176 4891510 -197436837 - L1MEc LINE L1 -3066 3149 2809 1616 206 7 4 chr4 4891510 4891812 -197436535 - AluJb SINE Alu 0 303 1 2825 206 20 43 chr4 4891812 4892331 -197436016 - L1MEc LINE L1 -3406 2809 2315 15003 92 1 1 chr4 4892612 4894800 -197433547 + L1P LINE L1 2814 5001 -1145 726 139 0 0 chr4 4895414 4895529 -197432818 + AluSp/q SINE Alu 193 307 -6 188 0 0 69 chr4 4895529 4895558 -197432789 + (GGA)n Simple_repeat Simple_repeat 1 27 0 37 70 0 0 chr4 4896819 4896862 -197431485 + AT_rich Low_complexity Low_complexity 1 43 0 213 194 0 0 chr4 4897072 4897108 -197431239 + (TG)n Simple_repeat Simple_repeat 1 36 0 4343 268 41 20 chr4 4897108 4897752 -197430595 - L1MEc LINE L1 -4318 2078 1449 203 0 0 36 chr4 4897752 4897780 -197430567 + (TTTA)n Simple_repeat Simple_repeat 1 27 0 1141 196 61 88 chr4 4897784 4898080 -197430267 - AluJo SINE Alu -14 288 1 4343 268 41 20 chr4 4898080 4899025 -197429322 - L1MEc LINE L1 -4949 1447 450 382 333 7 0 chr4 4899042 4899189 -197429158 - L1MEc LINE L1 -6026 370 223 1588 171 171 16 chr4 4899235 4899604 -197428743 + MSTA LTR MaLR 1 426 -2 1408 205 51 60 chr4 4899607 4900041 -197428306 + MLT1D LTR MaLR 76 505 0 1867 244 26 2 chr4 4900043 4900503 -197427844 + MLT1D-int LTR MaLR 4 474 -897 1275 204 110 31 chr4 4900476 4900859 -197427488 - L1ME2 LINE L1 -100 6064 5652 * 235 164 46 46 chr4 4901408 4901560 -197426787 + (TA)n Simple_repeat Simple_repeat 1 152 0 963 271 94 59 chr4 4901792 4902217 -197426130 + MLT1J1 LTR MaLR 7 446 0 793 196 111 7 chr4 4902260 4902413 -197425934 + FAM SINE Alu 1 169 -6 35484 29 2 0 chr4 4902513 4907499 -197420848 + L1PA3 LINE L1 1161 6154 -1 943 286 23 0 chr4 4907470 4907774 -197420573 + L1M4 LINE L1 3928 4238 -1908 * 4810 66 11 1 chr4 4907924 4908963 -197419384 + L1PA7 LINE L1 5005 6154 0 209 122 0 24 chr4 4909304 4909345 -197419002 + (TTTTTG)n Simple_repeat Simple_repeat 3 42 0 21 0 0 0 chr4 4909726 4909747 -197418600 + AT_rich Low_complexity Low_complexity 1 21 0 365 297 50 50 chr4 4909776 4909889 -197418458 - MIR SINE MIR -74 188 73 534 243 18 0 chr4 4909889 4910000 -197418347 - MER81 DNA DNA -1 113 1 365 297 50 50 chr4 4910000 4910068 -197418279 - MIR SINE MIR -188 74 7 219 303 0 45 chr4 4910090 4910179 -197418168 - MIR SINE MIR -163 99 15 1917 80 3 45 chr4 4910463 4910749 -197417598 + AluSx SINE Alu 1 274 -38 297 118 0 0 chr4 4910857 4910908 -197417439 + (TC)n Simple_repeat Simple_repeat 2 52 0 902 283 29 18 chr4 4911259 4911531 -197416816 + MLT1J LTR MaLR 11 285 -226 358 281 26 18 chr4 4911563 4911677 -197416670 + L1MEd LINE L1 693 807 -5312 267 288 25 0 chr4 4911688 4911768 -197416579 + MLT1J LTR MaLR 313 394 -117 2442 159 23 21 chr4 4911907 4912334 -197416013 + MSTB1 LTR MaLR 1 428 -4 378 271 189 0 chr4 4912554 4912676 -197415671 - MIR SINE MIR -1 261 117 277 231 68 60 chr4 4912674 4912791 -197415556 + L2 LINE L2 2861 2978 -294 * 568 206 48 0 chr4 4912825 4912971 -197415376 - MER53 DNA DNA -8 181 29 2155 117 0 0 chr4 4912986 4913295 -197415052 - AluSc SINE Alu 0 309 1 546 279 27 100 chr4 4913318 4913329 -197415018 + L2 LINE L2 2962 2972 -300 2041 124 7 7 chr4 4913329 4913636 -197414711 - AluSx SINE Alu -5 307 1 546 279 27 100 chr4 4913636 4913954 -197414393 + L2 LINE L2 2972 3267 -5 202 343 14 0 chr4 4913946 4914019 -197414328 - MIR SINE MIR -135 127 54 * 736 279 36 0 chr4 4914137 4914356 -197413991 + MIR SINE MIR 25 251 -11 285 350 162 23 chr4 4914368 4914523 -197413824 + L2 LINE L2 2846 2978 -335 1936 117 14 0 chr4 4914523 4914806 -197413541 + AluSg SINE Alu 1 287 -23 285 350 162 23 chr4 4914806 4915039 -197413308 + L2 LINE L2 2978 3288 -25 184 194 0 28 chr4 4915185 4915221 -197413126 - L2 LINE L2 -3 3310 3276 319 330 78 28 chr4 4915446 4915611 -197412736 - MIR SINE MIR -65 143 4 250 233 0 0 chr4 4915785 4915845 -197412502 + (TTCA)n Simple_repeat Simple_repeat 2 61 0 193 136 0 68 chr4 4916299 4916343 -197412004 - L2 LINE L2 -101 3212 3172 3464 234 58 28 chr4 4916505 4916535 -197411812 - MER45B DNA AcHobo -570 1011 983 4041 113 33 6 chr4 4916535 4917180 -197411167 + L1PB2 LINE L1 5482 6143 -8 3464 234 58 28 chr4 4917180 4917270 -197411077 - MER45B DNA AcHobo -598 983 897 1862 142 26 13 chr4 4917270 4917573 -197410774 + AluSx SINE Alu 1 307 -5 3464 234 58 28 chr4 4917573 4918376 -197409971 - MER45B DNA AcHobo -684 897 59 232 329 38 0 chr4 4919562 4919641 -197408706 - MIR SINE MIR -117 145 64 288 239 5 178 chr4 4920294 4920491 -197407856 - MLT1H LTR MaLR -375 174 12 398 309 20 26 chr4 4920555 4920707 -197407640 + MIR SINE MIR 47 197 -65 474 197 12 4 chr4 4920918 4921020 -197407327 + MER2 DNA MER2_type 1 101 -138 276 30 0 0 chr4 4921127 4921160 -197407187 + (TGAA)n Simple_repeat Simple_repeat 1 33 0 205 281 97 18 chr4 4921508 4921622 -197406725 - MIR SINE MIR -51 211 89 498 188 40 10 chr4 4921926 4922027 -197406320 - MIR3 SINE MIR -41 167 64 216 0 0 0 chr4 4922044 4922068 -197406279 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 342 0 0 0 chr4 4922067 4922105 -197406242 + (CA)n Simple_repeat Simple_repeat 1 38 0 406 224 12 0 chr4 4922710 4922795 -197405552 + MIR SINE MIR 71 156 -106 187 297 33 33 chr4 4923029 4923120 -197405227 - MIR SINE MIR -7 255 165 212 258 175 10 chr4 4923176 4923273 -197405074 - MIR SINE MIR -46 216 104 243 61 0 0 chr4 4923335 4923368 -197404979 + (TC)n Simple_repeat Simple_repeat 1 33 0 2134 129 44 41 chr4 4923633 4923996 -197404351 - THE1B LTR MaLR 0 364 1 192 222 48 16 chr4 4924341 4924404 -197403943 + L2 LINE L2 3207 3271 -1 364 274 7 78 chr4 4924470 4924517 -197403830 - MIR3 SINE MIR -52 156 107 2056 143 12 70 chr4 4924517 4924931 -197403416 + MLT1B LTR MaLR 1 390 0 364 274 7 78 chr4 4924931 4925036 -197403311 - MIR3 SINE MIR -101 107 15 2091 101 0 20 chr4 4925197 4925503 -197402844 + AluSq SINE Alu 1 300 -13 539 282 65 77 chr4 4925736 4925984 -197402363 + MIR SINE MIR 15 259 -3 23 0 0 0 chr4 4926052 4926075 -197402272 + AT_rich Low_complexity Low_complexity 1 23 0 420 324 0 0 chr4 4927245 4927353 -197400994 - MER81 DNA DNA -6 108 1 530 259 22 22 chr4 4927712 4927851 -197400496 - MIR SINE MIR -118 144 6 191 229 314 38 chr4 4928086 4928191 -197400156 + MIR3 SINE MIR 10 143 -65 * 283 232 101 0 chr4 4928165 4928234 -197400113 + MIR SINE MIR 117 192 -70 276 236 28 14 chr4 4928263 4928335 -197400012 - MIR SINE MIR -6 256 184 571 157 102 0 chr4 4928441 4928549 -197399798 - MER53 DNA DNA -68 121 3 784 173 161 0 chr4 4928968 4929130 -197399217 + MER5A DNA MER1_type 2 189 0 326 263 34 42 chr4 4930377 4930495 -197397852 - L2 LINE L2 -70 3243 3127 2811 239 31 50 chr4 4930587 4931041 -197397306 - L1ME1 LINE L1 -5 6161 5729 1585 154 48 0 chr4 4931041 4931314 -197397033 - AluJb SINE Alu -26 286 1 2811 239 31 50 chr4 4931314 4931748 -197396599 - L1ME1 LINE L1 -437 5729 5289 374 246 64 0 chr4 4931730 4931840 -197396507 - L1ME1 LINE L1 -1741 4405 4289 * 1963 99 18 0 chr4 4931972 4932245 -197396102 - AluSx SINE Alu -30 282 5 1572 127 0 27 chr4 4932253 4932453 -197395894 + Tigger4(Zombi) DNA MER2_type 2479 2672 -59 1922 140 64 17 chr4 4932453 4932811 -197395536 + THE1C LTR MaLR 1 375 0 1572 127 0 27 chr4 4932811 4932870 -197395477 + Tigger4(Zombi) DNA MER2_type 2672 2731 0 1141 261 106 79 chr4 4932889 4933675 -197394672 - HAL1 LINE L1 -1254 1253 447 331 210 0 25 chr4 4933855 4933936 -197394411 + MLT1C LTR MaLR 386 464 -3 316 266 9 101 chr4 4934383 4934492 -197393855 - MIR SINE MIR -74 134 36 1416 193 46 21 chr4 4935019 4935346 -197393001 + MLT1A1 LTR MaLR 31 365 0 304 145 0 157 chr4 4935977 4936060 -197392287 + MIR SINE MIR 107 176 -86 246 336 164 0 chr4 4936211 4936321 -197392026 + L2 LINE L2 3180 3307 -6 269 318 86 20 chr4 4937228 4937379 -197390968 + MIR SINE MIR 23 183 -79 237 33 0 0 chr4 4937427 4937457 -197390890 + (TG)n Simple_repeat Simple_repeat 2 31 0 366 224 0 13 chr4 4938310 4938386 -197389961 - AluJb SINE Alu 0 302 228 884 174 17 17 chr4 4938386 4938558 -197389789 - AluJb SINE Alu -140 172 1 653 311 55 0 chr4 4938825 4939044 -197389303 + MIR SINE MIR 1 231 -31 1401 222 58 51 chr4 4939046 4939497 -197388850 + MLT1D LTR MaLR 1 454 -51 332 133 17 0 chr4 4941158 4941218 -197387129 + MLT1D LTR MaLR 442 502 -3 664 157 33 0 chr4 4941440 4941561 -197386786 + MLT1D LTR MaLR 1 125 -380 1927 160 37 62 chr4 4941563 4942006 -197386341 + MLT2B2 LTR ERVL 3 414 0 417 147 0 15 chr4 4942010 4942078 -197386269 - MLT1E1 LTR MaLR -1 653 587 1826 209 27 8 chr4 4942081 4942450 -197385897 + MLT1D LTR MaLR 130 505 0 1673 205 67 14 chr4 4942543 4942914 -197385433 - MLT1E LTR MaLR 0 593 203 308 265 61 10 chr4 4942950 4943003 -197385344 - MLT1E LTR MaLR -490 103 54 1983 122 49 30 chr4 4943003 4943371 -197384976 - THE1C LTR MaLR 0 375 1 308 265 61 10 chr4 4943371 4943415 -197384932 - MLT1E LTR MaLR -539 54 1 498 248 102 13 chr4 4943520 4943677 -197384670 + MIR SINE MIR 41 211 -51 364 287 119 45 chr4 4943796 4944040 -197384307 + MLT1J LTR MaLR 5 266 -245 269 238 105 9 chr4 4944078 4944183 -197384164 + MLT1J LTR MaLR 347 461 -50 227 272 37 25 chr4 4944316 4944397 -197383950 - LTR16A1 LTR ERVL 0 457 376 901 198 104 85 chr4 4944849 4945213 -197383134 - MLT1C LTR MaLR -96 371 1 289 284 164 35 chr4 4945245 4945555 -197382792 - MLT1K LTR MaLR -16 572 223 1619 239 67 16 chr4 4946052 4946488 -197381859 - MLT1C LTR MaLR 0 467 10 452 188 50 0 chr4 4946548 4946649 -197381698 + LTR16C LTR ERVL 385 490 -1 413 338 13 19 chr4 4946791 4946945 -197381402 - MIR SINE MIR -100 162 10 3842 161 38 56 chr4 4947164 4947807 -197380540 - L1MA7 LINE L1 -1 6290 5637 1932 140 15 82 chr4 4947807 4948207 -197380140 - THE1C LTR MaLR -2 373 1 3842 161 38 56 chr4 4948207 4948271 -197380076 - L1MA7 LINE L1 -654 5637 5573 2401 70 3 0 chr4 4948271 4948573 -197379774 - AluY SINE Alu -8 303 1 3842 161 38 56 chr4 4948573 4948704 -197379643 - L1MA7 LINE L1 -718 5573 5466 375 304 83 80 chr4 4949195 4949655 -197378692 - MLT1K LTR MaLR -22 566 106 404 241 12 0 chr4 4949746 4949829 -197378518 - HERV16 LTR ERVL -2072 2924 2841 1318 326 73 30 chr4 4949861 4950787 -197377560 - HERV16 LTR ERVL -2264 2732 1765 5647 160 28 29 chr4 4950867 4952339 -197376008 - L1MA4 LINE L1 -2 6298 4804 * 10385 177 16 3 chr4 4952338 4954395 -197373952 + L1 LINE L1 2628 4711 -1435 1103 130 0 0 chr4 4954395 4954595 -197373752 + AluSg/x SINE Alu 131 330 0 712 101 0 0 chr4 4954595 4954694 -197373653 + L1 LINE L1 4708 4806 -1340 1003 310 117 79 chr4 4954742 4955629 -197372718 - HERV16 LTR ERVL -3555 1441 748 2153 139 12 18 chr4 4955957 4956296 -197372051 + MER1B DNA MER1_type 1 337 0 383 162 0 15 chr4 4956364 4956432 -197371915 - MLT1A2 LTR MaLR 0 374 308 1645 112 75 0 chr4 4956432 4956673 -197371674 + AluSx SINE Alu 1 259 -53 1491 207 25 19 chr4 4956707 4957021 -197371326 - MLT1A2 LTR MaLR -58 316 1 471 348 65 0 chr4 4957023 4957224 -197371123 - HERV16 LTR ERVL -4761 235 22 431 250 47 8 chr4 4957231 4957359 -197370988 + MLT1A1 LTR MaLR 229 361 -4 1341 179 82 15 chr4 4957811 4957928 -197370419 + AluJo SINE Alu 1 109 -203 480 18 0 0 chr4 4957928 4957985 -197370362 + (CA)n Simple_repeat Simple_repeat 2 58 0 1341 179 82 15 chr4 4957985 4958135 -197370212 + AluJo SINE Alu 109 286 -26 779 172 208 37 chr4 4958283 4958514 -197369833 + MLT2B2 LTR ERVL 174 493 -22 392 307 114 6 chr4 4958760 4958926 -197369421 - MIR SINE MIR -75 187 4 348 321 84 11 chr4 4959581 4959771 -197368576 - MIR3 SINE MIR -2 206 3 739 298 69 40 chr4 4960259 4960706 -197367641 - LTR33 LTR ERVL 0 521 62 423 231 111 34 chr4 4960750 4960968 -197367379 + Charlie8 DNA MER1_type 83 1386 -1031 180 234 160 75 chr4 4961010 4961104 -197367243 - MIR SINE MIR -87 121 20 202 319 44 0 chr4 4962067 4962158 -197366189 + L2 LINE L2 3094 3188 -125 321 53 0 0 chr4 4962158 4962196 -197366151 + THE1C LTR MaLR 123 160 -215 * 550 186 105 24 chr4 4962184 4962308 -197366039 - THE1C LTR MaLR -241 134 1 6533 101 8 6 chr4 4962308 4963189 -197365158 - THE1C-int LTR MaLR 0 1580 698 2148 72 7 17 chr4 4963177 4963470 -197364877 - THE1C-int LTR MaLR -1290 290 1 * 2056 146 64 14 chr4 4963470 4963827 -197364520 - THE1C LTR MaLR 0 375 1 524 282 15 8 chr4 4963829 4963960 -197364387 + L2 LINE L2 3182 3313 0 219 358 123 12 chr4 4966262 4966424 -197361923 + MIR SINE MIR 79 258 -4 1088 117 0 134 chr4 4966715 4966938 -197361409 - 7SK RNA RNA 0 193 1 1663 140 59 0 chr4 4967585 4967856 -197360491 - AluSq SINE Alu -15 298 12 197 284 58 77 chr4 4968445 4968600 -197359747 + MIR3 SINE MIR 4 155 -53 372 308 6 38 chr4 4969097 4969254 -197359093 + MIR SINE MIR 45 191 -65 186 222 56 19 chr4 4969433 4969487 -197358860 + MIR3 SINE MIR 9 64 -144 2099 100 81 36 chr4 4969526 4969885 -197358462 + THE1C LTR MaLR 1 375 0 525 282 77 23 chr4 4969943 4970202 -197358145 - LTR16C LTR ERVL -4 487 215 197 269 39 0 chr4 4970412 4970464 -197357883 + MIR SINE MIR 209 262 0 327 235 15 91 chr4 4970483 4970615 -197357732 + MLT1L LTR MaLR 43 164 -451 5081 111 10 9 chr4 4970745 4971612 -197356735 - L1P3 LINE L1 -4549 1912 1051 5753 106 2 7 chr4 4971612 4972115 -197356232 + L1P LINE L1 1644 2143 -4003 3315 137 8 6 chr4 4972115 4972625 -197355722 + MER9 LTR ERVK 1 511 0 5753 106 2 7 chr4 4972625 4972953 -197355394 + L1P LINE L1 2143 2471 -3675 4118 141 34 23 chr4 5023042 5023739 -197304608 + MER44D DNA MER2_type 1 705 0 205 188 35 35 chr4 5023924 5024009 -197304338 + (TATAA)n Simple_repeat Simple_repeat 5 89 0 2811 78 54 29 chr4 5024042 5024450 -197303897 - L1PB2 LINE L1 -2 6149 5732 786 127 11 33 chr4 5025450 5025631 -197302716 + (TTCC)n Simple_repeat Simple_repeat 2 178 0 1212 136 99 113 chr4 5025639 5025941 -197302406 - AluJo SINE Alu -1 311 14 233 247 0 55 chr4 5026099 5026172 -197302175 + GA-rich Low_complexity Low_complexity 4 72 0 403 178 0 0 chr4 5026882 5026955 -197301392 + MIR SINE MIR 78 150 -112 213 279 0 93 chr4 5027030 5027116 -197301231 + L3 LINE CR1 1411 1488 -89 758 80 0 9 chr4 5027153 5027265 -197301082 + (TTCC)n Simple_repeat Simple_repeat 2 112 0 1933 137 9 40 chr4 5027265 5027587 -197300760 - AluSx SINE Alu 0 312 1 245 111 44 0 chr4 5027723 5027768 -197300579 + C-rich Low_complexity Low_complexity 3 49 0 360 286 100 55 chr4 5028235 5028792 -197299555 - L1ME3A LINE L1 -273 5897 5286 * 421 284 5 58 chr4 5028784 5028901 -197299446 - L1ME3A LINE L1 -2029 4117 4012 2674 122 11 3 chr4 5028901 5029262 -197299085 + THE1B LTR MaLR 1 364 0 421 284 5 58 chr4 5029262 5029334 -197299013 - L1ME3A LINE L1 -2134 4012 3938 1352 251 61 10 chr4 5029339 5029746 -197298601 - L1ME3A LINE L1 -1 6169 5742 865 245 116 4 chr4 5029768 5030001 -197298346 - L1ME3A LINE L1 -517 5653 5395 830 166 0 21 chr4 5030002 5030147 -197298200 + FLAM_C SINE Alu 1 142 -1 958 192 12 75 chr4 5030275 5030321 -197298026 - MER33 DNA MER1_type -2359 226 179 2066 93 8 0 chr4 5030321 5030589 -197297758 - AluSx SINE Alu -12 300 31 958 192 12 75 chr4 5030589 5030782 -197297565 - MER33 DNA MER1_type -2406 179 2 448 265 80 15 chr4 5030790 5031171 -197297176 - L1ME LINE L1 -654 5508 5107 278 154 51 8 chr4 5031181 5031298 -197297049 + (TA)n Simple_repeat Simple_repeat 1 122 0 777 126 20 16 chr4 5031322 5031831 -197296516 + (TA)n Simple_repeat Simple_repeat 1 511 0 26 0 0 0 chr4 5031831 5031857 -197296490 + AT_rich Low_complexity Low_complexity 1 26 0 354 304 66 28 chr4 5031915 5032096 -197296251 + L2 LINE L2 2005 2192 -1122 433 242 160 45 chr4 5032119 5032388 -197295959 - LTR50 LTR ERVL 0 795 496 645 191 77 55 chr4 5032495 5032678 -197295669 - LTR41 LTR ERVL -586 187 1 2175 125 0 0 chr4 5032705 5033000 -197295347 - AluSx SINE Alu -17 295 1 536 362 119 21 chr4 5033001 5033581 -197294766 + L2 LINE L2 2229 2865 -449 255 284 91 26 chr4 5033697 5033833 -197294514 + L2 LINE L2 2871 3009 -263 2367 120 38 44 chr4 5033967 5034333 -197294014 - THE1B LTR MaLR 0 364 1 220 362 0 19 chr4 5034333 5034438 -197293909 + L2 LINE L2 3136 3238 -34 266 31 0 0 chr4 5034616 5034648 -197293699 - L1PB3 LINE L1 -2 6152 6121 674 92 0 0 chr4 5034648 5034735 -197293612 - MSTA LTR MaLR 0 428 342 2140 125 117 6 chr4 5034835 5035195 -197293152 - MSTA LTR MaLR -28 400 1 356 23 0 0 chr4 5035215 5035259 -197293088 + MADE1 DNA Mariner 36 79 -1 290 54 0 143 chr4 5035269 5035325 -197293022 - MADE1 DNA Mariner -32 48 1 1599 149 32 0 chr4 5035325 5035574 -197292773 - L1PB3 LINE L1 -58 6096 5840 221 312 37 18 chr4 5035576 5035685 -197292662 - MIR SINE MIR -73 189 79 580 203 63 76 chr4 5035744 5035981 -197292366 + MER113 DNA MER1_type? 6 239 -282 546 191 8 63 chr4 5036002 5036128 -197292219 - L1MA9 LINE L1 -115 6197 6079 842 93 0 0 chr4 5036321 5036429 -197291918 - AluY SINE Alu -5 306 199 1091 213 30 0 chr4 5036641 5036876 -197291471 + MIR SINE MIR 6 247 -15 572 296 47 24 chr4 5036914 5037127 -197291220 + MIR SINE MIR 16 233 -29 589 258 76 15 chr4 5037638 5037836 -197290511 + MLT1B LTR MaLR 6 215 -175 * 1192 275 120 14 chr4 5037809 5038242 -197290105 - MER45B DNA AcHobo -560 480 2 229 315 91 50 chr4 5038568 5038787 -197289560 - L2 LINE L2 -337 2977 2750 221 344 131 0 chr4 5038877 5038999 -197289348 - L2 LINE L2 -3 3269 3132 1995 124 3 10 chr4 5039194 5039500 -197288847 + AluSq SINE Alu 1 304 -9 834 271 46 17 chr4 5039556 5040231 -197288116 - L1M4 LINE L1 -1338 4808 3921 203 347 59 59 chr4 5040267 5040486 -197287861 - MIR SINE MIR -35 227 9 225 222 69 42 chr4 5040654 5040726 -197287621 + MIR SINE MIR 108 181 -81 242 301 48 10 chr4 5040778 5040881 -197287466 - MLT1K LTR MaLR -3 585 479 839 318 59 3 chr4 5040985 5041306 -197287041 + LTR16C LTR ERVL 144 482 -9 304 203 0 0 chr4 5041323 5041382 -197286965 - MER96 DNA MER1_type? 0 175 117 267 258 2 28 chr4 5041902 5041980 -197286367 - MIR SINE MIR -54 154 78 1188 284 48 13 chr4 5043016 5043494 -197284853 + L1ME LINE L1 805 1299 -5231 1039 280 52 53 chr4 5043514 5044307 -197284040 + L1ME LINE L1 1676 2467 -4073 559 242 136 70 chr4 5044430 5045049 -197283298 + L2 LINE L2 2545 3206 -107 2326 131 18 15 chr4 5045055 5045391 -197282956 + MER1B DNA MER1_type 1 337 0 407 320 8 8 chr4 5045415 5045537 -197282810 + L2 LINE L2 3178 3299 -14 210 71 0 0 chr4 5045538 5045566 -197282781 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 1014 274 123 33 chr4 5045579 5046003 -197282344 - MLT1K LTR MaLR -114 474 13 240 349 151 18 chr4 5046055 5046221 -197282126 + L2 LINE L2 3083 3270 -2 769 259 61 64 chr4 5047307 5047620 -197280727 + MLT1I LTR MaLR 10 321 -88 1268 164 33 109 chr4 5047643 5047812 -197280535 - AluJb SINE Alu 0 312 132 241 26 26 26 chr4 5047812 5047851 -197280496 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 1268 164 33 109 chr4 5047851 5047865 -197280482 - AluJb SINE Alu -180 132 119 2107 95 0 0 chr4 5047865 5048138 -197280209 - AluSx SINE Alu -39 273 1 1268 164 33 109 chr4 5048138 5048282 -197280065 - AluJb SINE Alu -193 119 9 448 171 13 0 chr4 5048283 5048359 -197279988 + MLT1I LTR MaLR 333 409 0 971 255 92 84 chr4 5048373 5049067 -197279280 - L1MEc LINE L1 -2070 4145 3439 2145 112 3 0 chr4 5049067 5049353 -197278994 - AluSp SINE Alu -26 287 1 971 255 92 84 chr4 5049353 5049679 -197278668 - L1MEc LINE L1 -2776 3439 3117 561 316 86 21 chr4 5049721 5050584 -197277763 - L1MEc LINE L1 -4639 1757 839 303 293 121 57 chr4 5051009 5051166 -197277181 - L1MEc LINE L1 -5901 304 138 236 345 85 20 chr4 5051213 5051413 -197276934 + L2 LINE L2 1707 1919 -1395 1145 83 0 13 chr4 5051587 5051764 -197276583 - AluY SINE Alu 0 306 132 810 161 8 0 chr4 5051864 5051994 -197276353 - AluJo SINE Alu -177 135 5 374 259 46 8 chr4 5051999 5052130 -197276217 - MER103 DNA DNA -24 142 7 258 269 45 0 chr4 5052922 5052989 -197275358 - L2 LINE L2 -3 3310 3241 610 313 28 14 chr4 5053017 5053228 -197275119 - MIR SINE MIR -7 255 42 2219 74 0 14 chr4 5054252 5054549 -197273798 + AluY SINE Alu 1 293 -18 494 310 105 0 chr4 5054831 5055002 -197273345 + MIR SINE MIR 2 190 -72 383 223 106 11 chr4 5055205 5055299 -197273048 + L2 LINE L2 3210 3312 -1 554 306 19 0 chr4 5055379 5055539 -197272808 + MIR SINE MIR 96 258 -4 379 273 11 0 chr4 5055820 5055908 -197272439 - L2 LINE L2 0 3272 3184 4998 159 39 5 chr4 5055908 5056764 -197271583 + L1MC1 LINE L1 5415 6299 -34 1597 72 0 10 chr4 5056779 5056986 -197271361 - L1PA6 LINE L1 -1 6153 5949 375 289 90 74 chr4 5057020 5057397 -197270950 - L2 LINE L2 -78 3235 2853 448 200 90 44 chr4 5058020 5058172 -197270175 - MER63A DNA MER1_type 0 210 50 295 146 0 0 chr4 5058223 5058264 -197270083 - MER63A DNA MER1_type -169 41 1 389 338 46 0 chr4 5058265 5058416 -197269931 + MIR SINE MIR 53 210 -52 211 280 187 9 chr4 5059299 5059406 -197268941 + L2 LINE L2 3121 3246 -26 205 384 59 27 chr4 5059438 5059657 -197268690 - L2 LINE L2 -53 3219 2994 * 453 309 8 8 chr4 5059628 5059751 -197268596 + L2 LINE L2 3150 3272 0 390 325 69 46 chr4 5059756 5060155 -197268192 - L2 LINE L2 -262 3010 2595 1809 171 53 13 chr4 5060720 5061100 -197267247 - L1MA9 LINE L1 0 6312 5918 325 310 8 23 chr4 5061506 5061635 -197266712 - MIR SINE MIR -62 146 20 349 268 109 91 chr4 5062189 5062454 -197265893 + L2 LINE L2 3036 3305 -8 196 291 89 0 chr4 5062537 5062616 -197265731 + L2 LINE L2 3137 3222 -50 2529 125 48 17 chr4 5062782 5063197 -197265150 - MSTA LTR MaLR 0 428 1 637 144 0 65 chr4 5063207 5063346 -197265001 - FRAM SINE Alu -4 172 43 1948 122 7 0 chr4 5063560 5063846 -197264501 + AluSx SINE Alu 1 288 -24 910 284 107 3 chr4 5063943 5064298 -197264049 + MER113 DNA MER1_type? 20 411 -110 238 182 0 23 chr4 5064432 5064476 -197263871 + CT-rich Low_complexity Low_complexity 3 45 0 225 0 0 0 chr4 5064484 5064509 -197263838 + (T)n Simple_repeat Simple_repeat 1 25 0 2061 106 0 0 chr4 5064590 5064914 -197263433 + AluSg SINE Alu 1 324 0 228 217 51 0 chr4 5065234 5065301 -197263046 - Charlie8 DNA MER1_type -2 2415 1345 254 328 38 15 chr4 5065592 5065723 -197262624 + L2 LINE L2 3075 3208 -105 320 263 41 36 chr4 5065880 5066074 -197262273 - L1M4 LINE L1 -2164 3982 3788 256 283 157 18 chr4 5066335 5066501 -197261846 - L1ME LINE L1 -438 5683 5495 283 149 15 60 chr4 5067169 5067207 -197261140 - Tigger3(Golem) DNA MER2_type -138 2891 2856 2830 3 0 0 chr4 5067207 5067519 -197260828 + AluYb8 SINE Alu 1 312 -6 283 149 15 60 chr4 5067519 5067547 -197260800 - Tigger3(Golem) DNA MER2_type -173 2856 2828 447 228 33 0 chr4 5068122 5068214 -197260133 - MLT1J LTR MaLR -321 190 96 273 284 0 14 chr4 5068226 5068300 -197260047 + L2 LINE L2 3200 3272 0 244 309 128 0 chr4 5068391 5068485 -197259862 - MIR SINE MIR -3 259 154 1570 266 93 70 chr4 5068537 5069010 -197259337 + L2 LINE L2 2061 2522 -791 1578 181 3 19 chr4 5069010 5069320 -197259027 + AluJb SINE Alu 5 309 -3 1570 266 93 70 chr4 5069320 5069831 -197258516 + L2 LINE L2 2522 3066 -247 3510 111 14 2 chr4 5069831 5070338 -197258009 - L1PA8A LINE L1 -1530 4616 4104 6487 88 2 2 chr4 5070351 5071860 -197256487 + L1PA8A LINE L1 4596 6130 -1 237 310 14 0 chr4 5071961 5072032 -197256315 - L2 LINE L2 0 3313 3242 768 198 213 55 chr4 5072156 5072504 -197255843 + MLT1C LTR MaLR 7 409 -58 2032 114 19 13 chr4 5072504 5072679 -197255668 - AluSx SINE Alu -3 309 130 2058 113 17 3 chr4 5072679 5072979 -197255368 - AluSq SINE Alu -9 304 1 2032 114 19 13 chr4 5072979 5073110 -197255237 - AluSx SINE Alu -182 130 1 462 256 125 30 chr4 5073115 5073283 -197255064 + MIR SINE MIR 48 231 -31 1144 97 0 0 chr4 5073571 5073725 -197254622 - AluSg/x SINE Alu -4 306 153 2109 85 64 5 chr4 5073736 5074097 -197254250 - LTR7 LTR ERV1 0 450 25 1037 139 6 6 chr4 5074097 5074269 -197254078 - AluSq SINE Alu -141 172 1 490 264 35 39 chr4 5074282 5074466 -197253881 - MIR SINE MIR -72 136 3 419 229 50 57 chr4 5074564 5074704 -197253643 - MIR SINE MIR -10 252 114 252 0 0 0 chr4 5074794 5074822 -197253525 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 270 193 72 48 chr4 5075305 5075388 -197252959 + MIR3 SINE MIR 87 171 -37 204 330 0 10 chr4 5075788 5075885 -197252462 + CT-rich Low_complexity Low_complexity 1 96 0 392 243 14 62 chr4 5076971 5077115 -197251232 + MIR SINE MIR 80 216 -46 195 293 98 9 chr4 5077219 5077407 -197250940 - MIR SINE MIR -2 260 12 2116 79 14 0 chr4 5078083 5078398 -197249949 + AluSq SINE Alu 1 319 0 350 330 75 74 chr4 5078524 5079078 -197249269 - L2 LINE L2 0 3272 2715 412 209 9 43 chr4 5079301 5079416 -197248931 + HsTC2 DNA Tc2 1783 1893 -5 653 264 22 33 chr4 5079888 5080070 -197248277 - MIR SINE MIR -48 214 35 185 194 0 0 chr4 5080153 5080189 -197248158 - L2 LINE L2 -16 3256 3221 438 265 75 90 chr4 5080261 5080593 -197247754 - MLT1J LTR MaLR -75 436 110 543 232 113 33 chr4 5080625 5080776 -197247571 + MER5A DNA MER1_type 1 163 -26 446 255 47 0 chr4 5081200 5081306 -197247041 + MER81 DNA DNA 2 112 -2 401 277 37 28 chr4 5082215 5082412 -197245935 - MIR SINE MIR -6 256 18 269 295 13 26 chr4 5083129 5083207 -197245140 - L2 LINE L2 0 3272 3196 455 294 88 44 chr4 5083213 5083485 -197244862 - L2 LINE L2 0 3313 3030 374 275 181 28 chr4 5083564 5083917 -197244430 - L2 LINE L2 -462 2852 2446 191 188 0 0 chr4 5085202 5085234 -197243113 - MIR SINE MIR -107 155 124 776 153 11 17 chr4 5085373 5085550 -197242797 + GA-rich Low_complexity Low_complexity 3 178 0 290 203 16 0 chr4 5085734 5085798 -197242549 + MIR SINE MIR 61 125 -137 402 268 109 55 chr4 5085798 5086018 -197242329 + Charlie8 DNA MER1_type 1 232 -2185 226 383 9 9 chr4 5086167 5086282 -197242065 + L2 LINE L2 2946 3060 -212 185 150 0 25 chr4 5086389 5086429 -197241918 + (CA)n Simple_repeat Simple_repeat 2 40 0 1753 179 152 29 chr4 5086498 5086946 -197241401 + MLT1D LTR MaLR 1 503 -2 353 282 52 69 chr4 5087147 5087321 -197241026 + MIR SINE MIR 20 190 -72 1040 270 72 17 chr4 5087631 5088076 -197240271 + MLT1H LTR MaLR 28 549 0 587 278 139 10 chr4 5088775 5088984 -197239363 + MIR SINE MIR 20 255 -7 22 0 0 0 chr4 5089532 5089554 -197238793 + AT_rich Low_complexity Low_complexity 1 22 0 269 224 37 82 chr4 5089764 5089898 -197238449 - L1ME4a LINE L1 -21 6100 5973 241 349 9 0 chr4 5090113 5090219 -197238128 + L2 LINE L2 3206 3312 -1 1890 150 0 0 chr4 5090242 5090529 -197237818 - AluSx SINE Alu -25 287 1 285 318 56 24 chr4 5090826 5090952 -197237395 + L2 LINE L2 3142 3271 -1 1331 126 0 11 chr4 5091011 5091202 -197237145 - Tigger2 DNA MER2_type -1 2717 2529 1562 181 0 7 chr4 5091210 5091486 -197236861 - AluJo SINE Alu -33 279 6 3414 128 65 5 chr4 5091489 5092043 -197236304 - Tigger2 DNA MER2_type -1572 1146 560 821 206 16 27 chr4 5092159 5092343 -197236004 + MLT1C LTR MaLR 286 467 0 286 313 52 10 chr4 5092373 5092469 -197235878 - MIR3 SINE MIR 0 208 109 206 289 52 41 chr4 5092884 5092981 -197235366 - L3 LINE CR1 -1471 106 9 290 256 35 0 chr4 5093172 5093258 -197235089 + MLT1K LTR MaLR 153 241 -347 1814 234 48 87 chr4 5093447 5094070 -197234277 + L1ME3A LINE L1 5546 6144 -26 313 318 129 30 chr4 5094097 5094330 -197234017 + L3 LINE CR1 1191 1446 -131 711 299 45 9 chr4 5094933 5095157 -197233190 - MIR SINE MIR -29 233 2 297 311 112 13 chr4 5095205 5095356 -197232991 - MIR SINE MIR -52 156 14 273 311 46 48 chr4 5095602 5095768 -197232579 + MIR SINE MIR 49 216 -46 458 202 67 29 chr4 5095904 5096008 -197232339 - L2 LINE L2 -8 3305 3198 342 269 175 29 chr4 5096065 5096236 -197232111 - MIR SINE MIR -14 248 53 213 225 14 28 chr4 5096363 5096434 -197231913 + (CAGGT)n Simple_repeat Simple_repeat 5 74 0 537 265 25 15 chr4 5097435 5097635 -197230712 + L1ME2 LINE L1 2141 2342 -3804 3518 250 57 24 chr4 5097695 5100078 -197228269 + L1ME2 LINE L1 2271 4880 -1266 1660 209 37 92 chr4 5100079 5100653 -197227694 + MLT2B3 LTR ERVL 1 542 -12 676 220 81 52 chr4 5100719 5101101 -197227246 + L1ME2 LINE L1 4942 5334 -812 781 223 53 75 chr4 5101102 5101421 -197226926 + L1ME2 LINE L1 5843 6154 -10 362 329 56 31 chr4 5101780 5101941 -197226406 + L2 LINE L2 3086 3250 -22 459 52 0 0 chr4 5101944 5102002 -197226345 + (TGGA)n Simple_repeat Simple_repeat 1 58 0 407 288 72 0 chr4 5102403 5102542 -197225805 - MIR SINE MIR -3 259 111 2183 178 17 19 chr4 5103583 5103627 -197224720 - MLT2D LTR ERVL 0 414 371 417 81 0 0 chr4 5103627 5103689 -197224658 + (CAGA)n Simple_repeat Simple_repeat 3 64 0 2183 178 17 19 chr4 5103689 5104059 -197224288 - MLT2D LTR ERVL -43 371 1 304 317 28 7 chr4 5104865 5105010 -197223337 + MLT1L LTR MaLR 338 485 -130 951 275 116 40 chr4 5105049 5105529 -197222818 + L2 LINE L2 2516 3074 -239 1040 164 19 14 chr4 5105529 5105736 -197222611 + MER3 DNA MER1_type 2 209 0 951 275 116 40 chr4 5105736 5105996 -197222351 + L2 LINE L2 3074 3313 0 458 316 80 30 chr4 5107146 5107383 -197220964 + L2 LINE L2 2243 2491 -823 1218 275 92 49 chr4 5107538 5109113 -197219234 - L1MEc LINE L1 -3372 2708 1001 225 94 0 0 chr4 5109113 5109145 -197219202 + (TG)n Simple_repeat Simple_repeat 1 32 0 1218 275 92 49 chr4 5109145 5109512 -197218835 - L1MEc LINE L1 -5079 1001 651 252 235 0 0 chr4 5109618 5109686 -197218661 - L1MEc LINE L1 -5162 908 841 273 273 0 122 chr4 5109860 5110032 -197218315 - L1MEc LINE L1 -5551 519 369 353 217 11 11 chr4 5110823 5110915 -197217432 - MLT1G LTR MaLR 0 590 499 373 295 30 42 chr4 5111215 5111452 -197216895 - L1ME LINE L1 -298 5823 5590 327 323 24 8 chr4 5111995 5112119 -197216228 + L2 LINE L2 3187 3312 -1 231 323 32 0 chr4 5112361 5112454 -197215893 - MER117 DNA MER1_type -87 110 15 927 286 78 30 chr4 5112772 5113234 -197215113 - MLT1L LTR MaLR -9 606 123 431 304 46 11 chr4 5114078 5114341 -197214006 - L1ME LINE L1 -301 5820 5549 1259 180 0 86 chr4 5114648 5114975 -197213372 - L1MA9 LINE L1 -277 6035 5737 * 3300 250 62 34 chr4 5114974 5116240 -197212107 - L1M2 LINE L1 -4469 1742 456 609 278 140 36 chr4 5116425 5116903 -197211444 - L1ME4a LINE L1 -1 6120 5593 391 289 71 47 chr4 5117088 5117299 -197211048 + MIR SINE MIR 35 250 -12 1973 149 3 3 chr4 5117471 5117767 -197210580 - AluSx SINE Alu -16 296 1 470 260 133 17 chr4 5118047 5118228 -197210119 + MIR SINE MIR 47 248 -14 205 176 0 0 chr4 5118328 5118362 -197209985 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 253 331 99 8 chr4 5118579 5118700 -197209647 + L2 LINE L2 3171 3302 -11 375 273 123 68 chr4 5118888 5119181 -197209166 + LTR16A1 LTR ERVL 147 455 -2 276 300 0 0 chr4 5119322 5119402 -197208945 - MIR SINE MIR -70 138 59 225 19 0 113 chr4 5119420 5119473 -197208874 + (TTTTTG)n Simple_repeat Simple_repeat 2 48 0 2249 126 0 0 chr4 5119479 5119788 -197208559 - AluSg SINE Alu 0 310 2 2246 181 22 84 chr4 5119893 5120440 -197207907 + MLT2B2 LTR ERVL 3 515 0 261 0 0 0 chr4 5120725 5120754 -197207593 + (TG)n Simple_repeat Simple_repeat 1 29 0 640 290 6 0 chr4 5122021 5122197 -197206150 + MER58A DNA MER1_type 3 179 -45 2488 113 5 24 chr4 5122242 5122613 -197205734 + THE1B LTR MaLR 1 364 0 597 178 0 52 chr4 5123014 5123149 -197205198 - MLT1I LTR MaLR -2 407 280 303 325 180 0 chr4 5123448 5123642 -197204705 - MIR SINE MIR -13 249 21 1836 193 0 7 chr4 5124240 5124545 -197203802 - AluJo SINE Alu -9 303 1 336 161 0 0 chr4 5125225 5125287 -197203060 + CT-rich Low_complexity Low_complexity 6 67 0 243 313 87 35 chr4 5125585 5125700 -197202647 + L2 LINE L2 3127 3247 -25 417 224 9 19 chr4 5125819 5125926 -197202421 - AluJb SINE Alu -14 298 193 372 252 57 32 chr4 5126039 5126162 -197202185 + L2 LINE L2 2622 2747 -567 409 281 104 48 chr4 5126550 5126804 -197201543 - L1M4 LINE L1 -918 5228 4990 2237 115 131 11 chr4 5126804 5127186 -197201161 + MSTA LTR MaLR 1 428 0 409 281 104 48 chr4 5127186 5127394 -197200953 - L1M4 LINE L1 -1156 4990 4740 335 298 63 99 chr4 5128507 5128809 -197199538 - L3 LINE CR1 -2 1575 1285 1012 191 5 11 chr4 5128842 5129031 -197199316 - MER5A DNA MER1_type -1 188 1 330 300 67 110 chr4 5129060 5129477 -197198870 - L2 LINE L2 -39 3233 2835 470 274 20 13 chr4 5130868 5131021 -197197326 - MLT1I LTR MaLR -399 156 3 243 250 0 0 chr4 5131023 5131075 -197197272 - L2 LINE L2 -599 2715 2664 287 348 129 0 chr4 5131190 5131391 -197196956 - L2 LINE L2 -608 2706 2480 201 292 135 0 chr4 5132429 5132518 -197195829 - MIR SINE MIR -141 121 21 483 339 81 30 chr4 5133143 5133441 -197194906 - L2 LINE L2 0 3272 2960 359 331 140 29 chr4 5133477 5133755 -197194592 - L2 LINE L2 -450 2864 2556 923 212 33 113 chr4 5134518 5134560 -197193787 + MLT1A1 LTR MaLR 1 45 -320 1724 111 0 0 chr4 5134560 5134785 -197193562 + AluSc SINE Alu 77 301 -8 923 212 33 113 chr4 5134785 5135139 -197193208 + MLT1A1 LTR MaLR 45 365 0 6880 209 65 35 chr4 5135139 5136440 -197191907 + MLT1A1-int LTR MaLR 1 1365 -370 2480 69 0 13 chr4 5136440 5136744 -197191603 + AluY SINE Alu 1 300 -11 6880 209 65 35 chr4 5136744 5137127 -197191220 + MLT1A1-int LTR MaLR 1365 1735 0 254 297 79 10 chr4 5137738 5137839 -197190508 + MIR SINE MIR 150 257 -5 435 228 24 0 chr4 5137922 5138045 -197190302 - Charlie1 DNA MER1_type 0 2761 2636 1974 115 44 0 chr4 5138045 5138342 -197190005 + AluSx SINE Alu 1 309 0 349 186 0 0 chr4 5138396 5138455 -197189892 + MER44D DNA MER2_type 2 60 -645 2481 196 24 29 chr4 5139257 5139809 -197188538 + MER44D DNA MER2_type 2 605 0 3756 275 119 22 chr4 5139816 5141334 -197187013 - Charlie1 DNA MER1_type -180 2581 917 1117 114 14 55 chr4 5141342 5141451 -197186896 - Tigger1 DNA MER2_type -8 2410 2313 2121 125 3 0 chr4 5141451 5141747 -197186600 + AluSq SINE Alu 1 297 -16 1117 114 14 55 chr4 5141747 5141857 -197186490 - Tigger1 DNA MER2_type -105 2313 2200 584 211 0 32 chr4 5141853 5141976 -197186371 - Tigger1 DNA MER2_type -2279 139 21 * 1801 212 76 58 chr4 5141973 5142066 -197186281 - Charlie1 DNA MER1_type -1832 929 839 616 157 20 0 chr4 5142066 5142168 -197186179 + L1PB4 LINE L1 6041 6144 -12 1801 212 76 58 chr4 5142168 5142749 -197185598 - Charlie1 DNA MER1_type -1922 839 243 831 151 0 22 chr4 5142749 5142888 -197185459 - AluSp/q SINE Alu -4 309 174 724 229 82 26 chr4 5142888 5142944 -197185403 - Charlie1 DNA MER1_type -2509 252 201 2317 113 3 0 chr4 5142944 5143255 -197185092 - AluSx SINE Alu 0 312 1 724 229 82 26 chr4 5143255 5143429 -197184918 - Charlie1 DNA MER1_type -2560 201 9 243 232 219 66 chr4 5143920 5144071 -197184276 + L2 LINE L2 3099 3272 0 2057 142 0 13 chr4 5144095 5144411 -197183936 + AluSx SINE Alu 1 312 0 435 273 8 0 chr4 5144743 5144864 -197183483 - L2 LINE L2 -1 3271 3150 1100 216 117 40 chr4 5144884 5145337 -197183010 - Charlie4a DNA MER1_type -20 488 1 324 284 12 12 chr4 5145631 5145793 -197182554 + L1ME4a LINE L1 5705 5866 -255 24 0 0 0 chr4 5146047 5146071 -197182276 + AT_rich Low_complexity Low_complexity 1 24 0 350 345 152 0 chr4 5146398 5146589 -197181758 + MIR SINE MIR 15 234 -28 334 184 102 20 chr4 5146639 5146737 -197181610 - MER103 DNA DNA -56 110 5 2938 240 83 20 chr4 5146881 5147709 -197180638 + L1MB7 LINE L1 8 887 -5655 * 3149 230 64 18 chr4 5147699 5149540 -197178807 + L1MB7 LINE L1 1439 3477 -3167 1222 91 22 4 chr4 5149537 5149809 -197178538 + L1MA2 LINE L1 5909 6224 -80 * 1523 116 13 0 chr4 5149809 5150042 -197178305 + L1MA2 LINE L1 6069 6304 0 2243 252 18 31 chr4 5150049 5150490 -197177857 + L1MB7 LINE L1 3461 3891 -2753 6307 71 8 21 chr4 5150490 5151651 -197176696 - L1PA8A LINE L1 0 6131 5007 2311 86 41 0 chr4 5151651 5151943 -197176404 - AluY SINE Alu -7 304 1 6307 71 8 21 chr4 5151943 5152156 -197176191 - L1PA8A LINE L1 -1124 5007 4793 2243 252 18 31 chr4 5152156 5152433 -197175914 + L1MB7 LINE L1 3891 4170 -2474 3735 184 47 34 chr4 5152439 5153488 -197174859 + L1MB7 LINE L1 5575 6631 -51 1353 163 50 48 chr4 5153488 5153529 -197174818 - MSTA LTR MaLR 0 364 325 2309 99 0 10 chr4 5153529 5153841 -197174506 + AluSx SINE Alu 1 309 -3 1353 163 50 48 chr4 5153841 5154171 -197174176 - MSTA LTR MaLR -39 325 1 2587 142 36 11 chr4 5154277 5154722 -197173625 + Tigger2 DNA MER2_type 3 458 -2260 881 19 9 0 chr4 5154722 5154828 -197173519 + L1PA4 LINE L1 5872 5978 -177 759 189 0 0 chr4 5155229 5155445 -197172902 + (CTCA)n Simple_repeat Simple_repeat 1 216 0 858 175 0 0 chr4 5155451 5155628 -197172719 + (TTCA)n Simple_repeat Simple_repeat 3 179 0 879 189 0 8 chr4 5155636 5155901 -197172446 + (CTCA)n Simple_repeat Simple_repeat 1 262 0 2086 170 18 5 chr4 5156655 5157038 -197171309 - MLT1B LTR MaLR -2 388 1 183 80 0 0 chr4 5157047 5157072 -197171275 + (CCA)n Simple_repeat Simple_repeat 1 25 0 254 228 0 76 chr4 5157123 5157215 -197171132 - MIR SINE MIR -14 248 164 191 235 0 29 chr4 5157876 5157944 -197170403 + (TATG)n Simple_repeat Simple_repeat 1 66 0 1483 246 46 7 chr4 5158122 5158555 -197169792 + MLT1E2 LTR MaLR 138 626 0 848 279 66 0 chr4 5159152 5159424 -197168923 - L1M4 LINE L1 -1186 4960 4671 211 304 0 0 chr4 5159471 5159527 -197168820 + CT-rich Low_complexity Low_complexity 2 57 0 1438 230 68 20 chr4 5160735 5160941 -197167406 + MLT1C LTR MaLR 53 248 -219 2796 94 3 0 chr4 5160941 5161304 -197167043 + THE1B LTR MaLR 1 364 0 1438 230 68 20 chr4 5161304 5161493 -197166854 + MLT1C LTR MaLR 248 467 0 21 0 0 0 chr4 5162429 5162450 -197165897 + AT_rich Low_complexity Low_complexity 1 21 0 210 232 54 0 chr4 5162896 5162952 -197165395 - MIR SINE MIR -75 187 129 960 261 54 51 chr4 5163086 5163643 -197164704 - L2 LINE L2 -5 3308 2739 672 315 25 36 chr4 5164631 5165023 -197163324 + L2 LINE L2 2703 3091 -222 753 214 60 11 chr4 5165045 5165227 -197163120 + MLT1D LTR MaLR 1 191 -314 1708 117 29 4 chr4 5165227 5165501 -197162846 - L1PA15 LINE L1 -261 5904 5624 1152 150 117 0 chr4 5165481 5165694 -197162653 + L1PA15 LINE L1 5917 6154 -11 * 969 210 210 4 chr4 5165694 5165966 -197162381 + MLT1D LTR MaLR 178 505 0 315 102 0 85 chr4 5165999 5166058 -197162289 - Alu SINE Alu -6 295 242 256 289 0 0 chr4 5166285 5166361 -197161986 + MLT1C LTR MaLR 392 467 0 268 341 44 22 chr4 5166367 5166394 -197161953 + L2 LINE L2 3113 3138 -175 2089 127 3 17 chr4 5166394 5166694 -197161653 - AluSx SINE Alu -16 296 1 268 341 44 22 chr4 5166694 5166848 -197161499 + L2 LINE L2 3138 3298 -15 257 208 0 0 chr4 5167291 5167359 -197160988 - MIR SINE MIR -63 145 77 194 323 50 20 chr4 5167461 5167560 -197160787 - MIR SINE MIR -109 153 52 270 282 26 0 chr4 5167671 5167749 -197160598 - MER102b DNA MER1_type -13 328 249 2086 174 50 21 chr4 5167804 5168183 -197160164 + MSTD LTR MaLR 7 396 0 427 278 67 51 chr4 5168553 5168866 -197159481 + L2 LINE L2 2940 3257 -56 284 295 11 11 chr4 5168875 5168970 -197159377 + (CATATA)n Simple_repeat Simple_repeat 5 99 0 2007 106 81 34 chr4 5168984 5169341 -197159006 + THE1C LTR MaLR 2 375 0 280 199 18 41 chr4 5169382 5169553 -197158794 + (CATATA)n Simple_repeat Simple_repeat 2 168 0 229 220 0 0 chr4 5169561 5169611 -197158736 - L1MC4 LINE L1 -1341 6701 6652 290 209 18 45 chr4 5169646 5169778 -197158569 + (CATATA)n Simple_repeat Simple_repeat 1 128 0 189 0 0 0 chr4 5170749 5170770 -197157577 + (A)n Simple_repeat Simple_repeat 1 21 0 448 270 101 64 chr4 5170775 5171071 -197157276 - L2 LINE L2 -88 3225 2919 223 218 55 0 chr4 5171101 5171156 -197157191 + L2 LINE L2 3201 3258 -14 229 234 172 0 chr4 5171234 5171298 -197157049 + MIR SINE MIR 48 122 -140 2128 151 29 0 chr4 5172027 5172405 -197155942 - MLT1B LTR MaLR -1 389 1 283 169 0 34 chr4 5172853 5172912 -197155435 - MLT2D LTR ERVL 0 520 464 229 150 0 0 chr4 5172891 5172931 -197155416 + LTR66 LTR ERVL 396 435 -175 * 320 253 38 0 chr4 5172932 5173011 -197155336 + L1MC4 LINE L1 6613 6694 -1348 342 242 0 42 chr4 5173015 5173110 -197155237 + L1MC4 LINE L1 6613 6703 -1339 315 269 0 21 chr4 5173113 5173206 -197155141 + L1MC4 LINE L1 6613 6703 -1339 216 185 0 0 chr4 5173208 5173262 -197155085 + (TATATG)n Simple_repeat Simple_repeat 6 59 0 1292 235 34 6 chr4 5173294 5173617 -197154730 - MLT2D LTR ERVL -82 332 1 277 266 0 0 chr4 5173757 5173821 -197154526 - MIR SINE MIR -80 182 119 416 305 134 21 chr4 5174094 5174422 -197153925 - L2 LINE L2 0 3313 2949 222 313 16 0 chr4 5174566 5174630 -197153717 + L2 LINE L2 3203 3267 -5 367 269 60 15 chr4 5174741 5174875 -197153472 - MLT1L LTR MaLR 0 615 476 262 252 33 105 chr4 5174865 5175073 -197153274 - MLT1J LTR MaLR -185 391 212 * 387 0 0 0 chr4 5176988 5177031 -197151316 + (TG)n Simple_repeat Simple_repeat 2 44 0 1406 221 30 29 chr4 5177561 5177936 -197150411 - MLT1C LTR MaLR -22 604 69 692 251 16 5 chr4 5177936 5178123 -197150224 - MLT1A2 LTR MaLR 0 374 186 251 227 120 0 chr4 5178136 5178211 -197150136 - MIR SINE MIR -129 133 50 263 270 81 18 chr4 5178406 5178517 -197149830 - MIR3 SINE MIR -76 132 15 254 173 0 19 chr4 5179757 5179809 -197148538 + MIR SINE MIR 106 156 -106 1536 244 73 5 chr4 5179996 5180406 -197147941 + MLT1C LTR MaLR 21 458 -9 276 304 144 31 chr4 5180834 5181028 -197147319 + MIR SINE MIR 31 246 -16 936 288 104 18 chr4 5181086 5181538 -197146809 - LTR16C LTR ERVL 0 491 1 301 303 42 48 chr4 5181556 5181721 -197146626 + L2 LINE L2 3109 3272 0 225 244 0 0 chr4 5182878 5182923 -197145424 + L2 LINE L2 3213 3257 -15 448 259 85 80 chr4 5183397 5183795 -197144552 - L1ME4a LINE L1 -45 6076 5677 43999 45 3 0 chr4 5183918 5190045 -197138302 - L1PA4 LINE L1 0 6155 15 2229 141 0 0 chr4 5190048 5190353 -197137994 - AluSq SINE Alu -8 305 1 255 241 45 54 chr4 5190525 5190637 -197137710 + MIR SINE MIR 81 191 -71 2100 144 32 29 chr4 5190710 5191084 -197137263 - THE1C LTR MaLR 0 375 1 10256 126 37 3 chr4 5191084 5192612 -197135735 - THE1C-int LTR MaLR 0 1580 1 2178 123 24 39 chr4 5192612 5192993 -197135354 - THE1C LTR MaLR 0 375 1 1110 123 10 62 chr4 5193137 5193270 -197135077 - Tigger1 DNA MER2_type -1236 1182 1061 2256 105 3 13 chr4 5193270 5193585 -197134762 + AluSp SINE Alu 1 312 -1 1110 123 10 62 chr4 5193585 5193646 -197134701 - Tigger1 DNA MER2_type -1357 1061 998 448 161 62 0 chr4 5193653 5193734 -197134613 - Tigger1 DNA MER2_type -2062 356 271 4937 147 6 5 chr4 5193735 5194515 -197133832 - Tigger1 DNA MER2_type -1422 996 216 388 108 82 13 chr4 5194658 5194816 -197133531 + (TAGA)n Simple_repeat Simple_repeat 4 172 0 246 279 105 0 chr4 5194898 5194984 -197133363 - MLT1K LTR MaLR -7 581 487 253 247 155 0 chr4 5195018 5195115 -197133232 - MLT1K LTR MaLR -181 407 296 267 295 29 79 chr4 5195134 5195273 -197133074 - MLT1K LTR MaLR -413 175 44 258 230 300 0 chr4 5195572 5195672 -197132675 - MIR SINE MIR -105 157 28 729 261 148 27 chr4 5196336 5196519 -197131828 + MLT1A2 LTR MaLR 1 160 -214 351 0 0 0 chr4 5196519 5196558 -197131789 + (CA)n Simple_repeat Simple_repeat 2 40 0 729 261 148 27 chr4 5196558 5196704 -197131643 + MLT1A2 LTR MaLR 160 370 -4 7257 128 34 16 chr4 5196731 5197641 -197130706 - Tigger1 DNA MER2_type 0 2418 1481 2375 95 10 0 chr4 5197641 5197947 -197130400 - AluSx SINE Alu -3 309 1 7257 128 34 16 chr4 5197947 5198200 -197130147 - Tigger1 DNA MER2_type -937 1481 1234 3282 107 32 6 chr4 5198392 5198858 -197129489 + MER1A DNA MER1_type 52 529 0 529 266 101 35 chr4 5198904 5199261 -197129086 - L1MC4a LINE L1 -621 7234 6884 1159 282 112 22 chr4 5199271 5199824 -197128523 - L1ME3A LINE L1 -4 6166 5564 463 291 89 24 chr4 5199809 5200056 -197128291 - L1ME3A LINE L1 -2448 3698 3436 * 217 325 26 26 chr4 5200543 5200660 -197127687 - MIR3 SINE MIR -2 206 90 186 103 0 0 chr4 5200666 5200695 -197127652 + (TTCA)n Simple_repeat Simple_repeat 1 29 0 6575 197 25 20 chr4 5200866 5203152 -197125195 + L1PB4 LINE L1 3861 6156 0 1350 279 78 0 chr4 5203181 5203564 -197124783 - LTR16C LTR ERVL 0 491 79 1407 235 118 30 chr4 5203622 5204095 -197124252 - MLT2B2 LTR ERVL 0 515 1 280 277 204 0 chr4 5204267 5204404 -197123943 - L2 LINE L2 0 3313 3149 557 238 47 29 chr4 5204408 5204439 -197123908 + MLT1I LTR MaLR 232 261 -148 2406 164 6 6 chr4 5204439 5204804 -197123543 + MLT1A1 LTR MaLR 1 365 0 557 238 47 29 chr4 5204804 5204944 -197123403 + MLT1I LTR MaLR 261 406 -3 535 279 99 97 chr4 5205004 5205111 -197123236 + L2 LINE L2 2723 2828 -444 2462 104 16 65 chr4 5205111 5205494 -197122853 - THE1B LTR MaLR 0 364 1 535 279 99 97 chr4 5205494 5205943 -197122404 + L2 LINE L2 2828 3272 0 280 241 71 36 chr4 5207245 5207357 -197120990 + MIR SINE MIR 74 189 -73 201 74 0 0 chr4 5207563 5207590 -197120757 + (CA)n Simple_repeat Simple_repeat 1 27 0 717 199 7 21 chr4 5207617 5207758 -197120589 + MER45 DNA AcHobo 1 139 -1442 629 170 54 34 chr4 5207760 5207907 -197120440 - L1MA8 LINE L1 -14 6277 6128 4733 161 20 15 chr4 5207907 5208794 -197119553 - L1 LINE L1 -1379 4767 3876 295 259 64 59 chr4 5208813 5209033 -197119314 - L1MC/D LINE L1 -2332 5476 5256 3155 180 3 7 chr4 5209192 5209787 -197118560 - L1 LINE L1 -2249 3897 3305 443 318 74 52 chr4 5209787 5210193 -197118154 + L2 LINE L2 2876 3290 -23 690 176 6 80 chr4 5210310 5210486 -197117861 - MER106B DNA MER1_type -1 1058 896 200 347 68 32 chr4 5212133 5212323 -197116024 + L2 LINE L2 2862 3058 -214 281 266 145 24 chr4 5212522 5212646 -197115701 + MIR SINE MIR 40 178 -84 200 233 0 0 chr4 5212796 5212839 -197115508 + T-rich Low_complexity Low_complexity 1 43 0 331 316 66 15 chr4 5213272 5213408 -197114939 - MER5B DNA MER1_type -31 147 5 1873 140 90 36 chr4 5214049 5214405 -197113942 - THE1C LTR MaLR 0 375 1 3398 117 21 46 chr4 5214405 5214967 -197113380 - THE1C-int LTR MaLR 0 1580 1033 2778 54 0 9 chr4 5264967 5265298 -197063049 + L1PA5 LINE L1 5824 6151 -3 1776 163 21 0 chr4 5265756 5266039 -197062308 - AluSx SINE Alu -23 289 1 26 64 0 0 chr4 5266101 5266148 -197062199 + AT_rich Low_complexity Low_complexity 1 47 0 552 311 77 30 chr4 5266239 5266799 -197061548 - L1ME4a LINE L1 -206 5915 5330 2708 23 0 3 chr4 5266934 5267243 -197061104 - L1PA4 LINE L1 -312 5843 5536 1823 36 22 0 chr4 5267243 5267466 -197060881 + L1P LINE L1 4986 5213 -933 2281 81 0 7 chr4 5268339 5268636 -197059711 - L1P2 LINE L1 -383 5771 5477 1417 94 0 0 chr4 5268638 5268819 -197059528 + L1PA5 LINE L1 5970 6150 -4 1518 119 16 67 chr4 5268819 5269072 -197059275 + MSTA LTR MaLR 189 428 0 304 264 114 21 chr4 5269392 5269532 -197058815 + MIR SINE MIR 61 213 -49 333 321 9 9 chr4 5269612 5269724 -197058623 + MIR SINE MIR 4 115 -147 9497 27 13 0 chr4 5269970 5271867 -197056480 - L1PA4 LINE L1 -5 6150 4234 5175 132 17 11 chr4 5272194 5272745 -197055602 - L1PA15 LINE L1 -2 6163 5604 2309 115 0 0 chr4 5272745 5273050 -197055297 - AluSx SINE Alu -7 305 1 5175 132 17 11 chr4 5273050 5273302 -197055045 - L1PA15 LINE L1 -561 5604 5355 1667 253 87 31 chr4 5273425 5274381 -197053966 - L1M1 LINE L1 -4148 3417 2423 1658 155 33 39 chr4 5274375 5274711 -197053636 + L1MA7 LINE L1 5780 6113 -178 * 3147 168 73 16 chr4 5274711 5275276 -197053071 + MER44D DNA MER2_type 3 599 -106 502 263 32 5 chr4 5275289 5275422 -197052925 - MER2 DNA MER2_type -87 152 8 602 164 29 10 chr4 5275430 5275534 -197052813 + Tigger7 DNA MER2_type 2381 2486 -1 874 154 51 0 chr4 5275543 5275699 -197052648 + L1MA7 LINE L1 6123 6286 -5 4351 173 23 34 chr4 5275972 5276902 -197051445 - L1P LINE L1 -829 5317 4399 440 145 12 24 chr4 5277865 5277948 -197050399 - THE1C LTR MaLR -293 82 1 278 307 79 11 chr4 5277949 5278138 -197050209 - MER113 DNA MER1_type? -318 203 2 266 148 19 0 chr4 5279065 5279119 -197049228 + GA-rich Low_complexity Low_complexity 1 55 0 1184 247 50 15 chr4 5279693 5280094 -197048253 + HAL1 LINE L1 781 1195 -1312 2154 101 0 71 chr4 5280264 5280601 -197047746 + AluSq SINE Alu 1 313 0 1236 196 57 25 chr4 5280937 5281399 -197046948 - L1MC/D LINE L1 -749 5633 5258 2863 235 81 87 chr4 5281513 5281589 -197046758 - L1MC/D LINE L1 -1085 5297 5222 2229 110 0 0 chr4 5281589 5281881 -197046466 - AluSq SINE Alu -21 292 1 2863 235 81 87 chr4 5281881 5283115 -197045232 - L1MC/D LINE L1 -1160 5222 3995 2391 68 6 3 chr4 5283373 5283684 -197044663 + AluSx SINE Alu 1 312 0 875 276 85 65 chr4 5284171 5284631 -197043716 - MLT1J LTR MaLR -42 469 1 530 227 153 0 chr4 5284924 5285074 -197043273 + MIR SINE MIR 41 213 -49 298 210 49 0 chr4 5285074 5285155 -197043192 + MIR SINE MIR 129 213 -49 298 210 49 0 chr4 5285155 5285236 -197043111 + MIR SINE MIR 129 213 -49 323 262 71 8 chr4 5285236 5285362 -197042985 + MIR SINE MIR 129 262 0 310 319 60 64 chr4 5286499 5286734 -197041613 + MIR SINE MIR 28 261 -1 4825 98 0 12 chr4 5286868 5287528 -197040819 - L1P3 LINE L1 -5804 657 6 1669 206 27 0 chr4 5287666 5288039 -197040308 - L1 LINE L1 -1112 5034 4652 5653 190 10 22 chr4 5288042 5289217 -197039130 + L1 LINE L1 3470 4630 -1516 2698 236 48 38 chr4 5289227 5290177 -197038170 - L1 LINE L1 -2166 3980 3021 466 237 95 27 chr4 5290157 5290419 -197037928 - L1MC/D LINE L1 -3961 2423 2144 * 321 177 89 48 chr4 5290444 5290568 -197037779 - L1MC4 LINE L1 0 8042 7914 * 581 307 42 3 chr4 5290551 5290857 -197037490 - L1M4 LINE L1 -947 5199 4882 3333 115 8 123 chr4 5290890 5291540 -197036807 - L1PB2 LINE L1 -7 6144 5570 5554 217 9 12 chr4 5291640 5292890 -197035457 - L1PB2 LINE L1 -906 5240 3995 2061 63 7 7 chr4 5292994 5293263 -197035084 - AluSx SINE Alu -29 283 15 1577 158 31 54 chr4 5293263 5293580 -197034767 - MER31B LTR ERV1 -156 310 1 692 265 64 15 chr4 5293703 5293907 -197034440 - MER58A DNA MER1_type -9 215 2 972 239 80 84 chr4 5295257 5295691 -197032656 - MLT2B1 LTR ERVL -8 512 71 1153 205 216 3 chr4 5295960 5296335 -197032012 + MLT1C LTR MaLR 10 464 -3 1031 227 58 73 chr4 5296338 5296517 -197031830 + MER113 DNA MER1_type? 32 212 -309 1568 213 56 34 chr4 5296517 5296874 -197031473 - MLT1A1 LTR MaLR 0 365 1 1031 227 58 73 chr4 5296874 5297091 -197031256 + MER113 DNA MER1_type? 212 422 -99 30547 109 10 15 chr4 5297280 5302919 -197025428 + L1PA8 LINE L1 845 6487 0 3079 152 12 44 chr4 5302919 5303702 -197024645 + L1PA16 LINE L1 5031 5783 -383 790 144 68 0 chr4 5303702 5303833 -197024514 + L1PA16 LINE L1 6025 6165 -1 2749 241 75 15 chr4 5303836 5303879 -197024468 + L1MB7 LINE L1 3973 4012 -2134 202 0 91 0 chr4 5303879 5303912 -197024435 + (CAAA)n Simple_repeat Simple_repeat 2 37 0 2749 241 75 15 chr4 5303912 5304740 -197023607 + L1MB7 LINE L1 4012 4896 -1250 640 276 60 0 chr4 5304747 5304997 -197023350 - L1M4 LINE L1 -1456 4690 4426 237 213 0 0 chr4 5305002 5305049 -197023298 + L1PA12 LINE L1 6116 6162 -6 28 29 0 0 chr4 5305066 5305101 -197023246 + AT_rich Low_complexity Low_complexity 1 35 0 530 221 39 0 chr4 5305102 5305206 -197023141 + Tigger3(Golem) DNA MER2_type 1 108 -2921 * 1598 117 55 16 chr4 5305193 5305500 -197022847 + Tigger3(Golem) DNA MER2_type 2274 2592 -437 240 167 0 0 chr4 5305500 5305542 -197022805 - L1PA13 LINE L1 -6343 444 403 2023 122 0 0 chr4 5305552 5305838 -197022509 + L1PA15 LINE L1 5879 6164 -1 1710 58 0 108 chr4 5305845 5306103 -197022244 + AluY SINE Alu 1 230 -81 356 275 0 0 chr4 5306103 5306194 -197022153 - L1ME LINE L1 -699 5465 5375 252 89 44 0 chr4 5306205 5306250 -197022097 + Alu SINE Alu 254 300 0 * 2716 150 48 17 chr4 5306230 5306689 -197021658 + Tigger3(Golem) DNA MER2_type 2557 3029 0 3936 191 58 36 chr4 5306689 5307939 -197020408 + L1MB7 LINE L1 4899 6175 -9 306 217 28 85 chr4 5307949 5308055 -197020292 + L1MC4a LINE L1 5880 5979 -1829 2164 227 88 64 chr4 5308236 5308595 -197019752 + L1ME3A LINE L1 5317 5666 -504 2462 73 0 0 chr4 5308595 5308896 -197019451 + AluSg SINE Alu 1 301 -9 2164 227 88 64 chr4 5308896 5309361 -197018986 + L1ME3A LINE L1 5666 6161 -9 1607 117 68 19 chr4 5309490 5309755 -197018592 - MLT1B LTR MaLR 0 390 113 1457 150 31 8 chr4 5310198 5310452 -197017895 - Tigger2 DNA MER2_type -1 2717 2458 2410 129 47 3 chr4 5310505 5310870 -197017477 - Tigger2 DNA MER2_type -1966 752 372 1816 99 8 4 chr4 5310973 5311226 -197017121 - L1PA8 LINE L1 -51 6121 5868 1949 126 136 79 chr4 5311256 5311621 -197016726 + MSTA LTR MaLR 1 393 -35 2192 123 0 13 chr4 5311621 5311930 -197016417 - AluSx SINE Alu -7 305 1 1949 126 136 79 chr4 5311930 5311969 -197016378 + MSTA LTR MaLR 393 428 0 9112 146 56 22 chr4 5311971 5313498 -197014849 + MSTA-int LTR MaLR 3 1580 0 2096 141 147 8 chr4 5313498 5313873 -197014474 + MSTA LTR MaLR 1 427 -1 993 308 51 45 chr4 5313895 5314404 -197013943 - L1MEd LINE L1 -5596 523 12 188 234 21 0 chr4 5314605 5314652 -197013695 - L2 LINE L2 0 3313 3266 2010 121 4 4 chr4 5316464 5316769 -197011578 - AluSx SINE Alu 0 305 1 719 145 69 0 chr4 5316772 5316903 -197011444 + L1MB2 LINE L1 6028 6167 -4 359 252 17 17 chr4 5316911 5317026 -197011321 + MIR SINE MIR 135 249 -13 1209 87 0 0 chr4 5317030 5317179 -197011168 - AluSg SINE Alu -161 149 1 956 264 97 19 chr4 5317299 5317834 -197010513 - L1M4 LINE L1 -2803 3343 2767 260 287 121 45 chr4 5318052 5318209 -197010138 - L2 LINE L2 0 3272 3104 1491 253 55 30 chr4 5318523 5319032 -197009315 - L1ME3 LINE L1 -1 6161 5640 315 281 26 18 chr4 5319184 5319298 -197009049 - MIR3 SINE MIR -24 184 70 236 271 169 34 chr4 5319933 5320051 -197008296 + L2 LINE L2 3139 3272 0 720 222 0 0 chr4 5320052 5320306 -197008041 + (TGAG)n Simple_repeat Simple_repeat 1 254 0 933 172 0 0 chr4 5320342 5320522 -197007825 + (TGAG)n Simple_repeat Simple_repeat 1 180 0 333 273 206 5 chr4 5320547 5320741 -197007606 + L2 LINE L2 2536 2768 -546 2187 128 0 6 chr4 5320753 5321066 -197007281 + AluSx SINE Alu 1 311 -1 201 291 96 8 chr4 5321072 5321260 -197007087 + MIR SINE MIR 16 260 -2 281 272 278 12 chr4 5321339 5321512 -197006835 + MIR SINE MIR 35 253 -9 1378 267 132 16 chr4 5321632 5322436 -197005911 + L2 LINE L2 2420 3288 -25 850 303 16 28 chr4 5322482 5322736 -197005611 + MIR SINE MIR 2 252 -10 309 293 98 62 chr4 5322860 5323085 -197005262 - L2 LINE L2 -115 3157 2925 303 140 0 0 chr4 5323161 5323211 -197005136 + (CA)n Simple_repeat Simple_repeat 2 51 0 455 341 96 47 chr4 5323384 5323812 -197004535 - L2 LINE L2 -1 3271 2823 1647 233 31 46 chr4 5323815 5324271 -197004076 - LTR16A LTR ERVL 0 450 2 348 359 84 20 chr4 5324303 5324554 -197003793 - L2 LINE L2 -502 2812 2546 355 230 58 0 chr4 5324657 5324744 -197003603 - MIR SINE MIR -122 140 49 302 138 17 0 chr4 5324828 5324886 -197003461 + (TTA)n Simple_repeat Simple_repeat 2 60 0 279 241 123 92 chr4 5325404 5325440 -197002907 + L1ME4a LINE L1 5795 5828 -293 2450 58 3 0 chr4 5325440 5325735 -197002612 + AluY SINE Alu 2 297 -14 279 241 123 92 chr4 5325735 5326014 -197002333 + L1ME4a LINE L1 5828 6120 -1 2735 235 81 36 chr4 5326829 5327599 -197000748 - L1ME2 LINE L1 -66 6098 5241 2449 61 0 3 chr4 5327599 5327896 -197000451 + AluY SINE Alu 1 296 -15 2735 235 81 36 chr4 5327896 5328300 -197000047 - L1ME2 LINE L1 -923 5241 4857 375 362 82 15 chr4 5328300 5328496 -196999851 - LTR16C LTR ERVL -197 294 86 370 237 65 47 chr4 5328948 5329180 -196999167 - L1ME LINE L1 -303 5818 5583 225 276 17 138 chr4 5330619 5330735 -196997612 - MIR SINE MIR -58 150 49 444 311 66 59 chr4 5331357 5331628 -196996719 + L2 LINE L2 2858 3134 -179 419 0 20 0 chr4 5331628 5331679 -196996668 + (TG)n Simple_repeat Simple_repeat 2 53 0 444 311 66 59 chr4 5331679 5331815 -196996532 + L2 LINE L2 3134 3268 -45 2848 249 142 11 chr4 5331876 5332856 -196995491 + L1MEc LINE L1 34 1141 -5255 2600 231 66 57 chr4 5332845 5333219 -196995128 + L1M4 LINE L1 3604 3973 -2173 * 3641 83 13 0 chr4 5333219 5333666 -196994681 - MLT2A2 LTR ERVL 0 453 1 2600 231 66 57 chr4 5333666 5334053 -196994294 + L1M4 LINE L1 3973 4378 -1768 2056 115 11 4 chr4 5334053 5334331 -196994016 - AluSg SINE Alu -30 280 1 2600 231 66 57 chr4 5334331 5334504 -196993843 + L1M4 LINE L1 4378 4548 -1598 * 10300 26 0 0 chr4 5334502 5335687 -196992660 - L1PA2 LINE L1 -1397 4749 3565 8370 14 1 0 chr4 5335687 5337099 -196991248 + L1PA2 LINE L1 4743 6155 0 1378 221 34 0 chr4 5337123 5337445 -196990902 + L1M4 LINE L1 4533 4865 -1281 223 173 19 192 chr4 5337446 5337520 -196990827 - L2 LINE L2 -93 3220 3167 6388 60 18 15 chr4 5337520 5338298 -196990049 + LTR17 LTR ERV1 1 780 0 223 173 19 192 chr4 5338298 5338327 -196990020 - L2 LINE L2 -146 3167 3135 2258 114 0 0 chr4 5339101 5339400 -196988947 + AluSx SINE Alu 1 299 -13 227 387 124 13 chr4 5339723 5339948 -196988399 - L2 LINE L2 -339 2975 2726 201 349 19 0 chr4 5339969 5340075 -196988272 - L2 LINE L2 -299 2973 2866 2229 91 0 17 chr4 5340149 5340447 -196987900 - AluY SINE Alu -18 293 1 339 340 27 0 chr4 5340447 5340594 -196987753 - MIR SINE MIR 0 262 112 384 293 153 27 chr4 5340660 5340994 -196987353 + L2 LINE L2 2594 2969 -345 256 278 88 36 chr4 5341022 5341216 -196987131 - LTR67 LTR ERVL -2 555 352 303 260 42 31 chr4 5341271 5341367 -196986980 - LTR67 LTR ERVL -369 188 92 245 279 72 27 chr4 5341520 5341631 -196986716 + L2 LINE L2 3182 3297 -16 355 178 55 0 chr4 5341723 5341796 -196986551 - MER116 DNA Mariner 0 80 4 433 254 54 15 chr4 5342453 5342583 -196985764 + MIR SINE MIR 79 213 -49 244 288 0 0 chr4 5342620 5342679 -196985668 + MIR SINE MIR 204 262 0 821 180 0 0 chr4 5343396 5343518 -196984829 + FLAM_C SINE Alu 2 123 -20 227 198 75 23 chr4 5344317 5344408 -196983939 + MIR SINE MIR 85 147 -61 257 294 88 0 chr4 5345069 5345171 -196983176 - L2 LINE L2 -26 3246 3136 742 279 12 59 chr4 5345225 5345415 -196982932 + MIR SINE MIR 21 198 -64 2061 146 0 0 chr4 5345415 5345717 -196982630 + AluSx SINE Alu 1 302 -10 742 279 12 59 chr4 5345717 5345780 -196982567 + MIR SINE MIR 198 262 0 214 289 0 0 chr4 5345790 5345842 -196982505 - L2 LINE L2 -191 3081 3030 1131 186 48 5 chr4 5345858 5346068 -196982279 - MER20 DNA MER1_type 0 219 1 27 0 0 0 chr4 5346940 5346967 -196981380 + AT_rich Low_complexity Low_complexity 1 27 0 13798 139 36 14 chr4 5347890 5350155 -196978192 - Tigger1 DNA MER2_type -81 2337 24 425 103 0 17 chr4 5350270 5350328 -196978019 + AluJ/FLAM SINE Alu 2 58 -254 319 317 60 12 chr4 5350910 5351077 -196977270 + L2 LINE L2 3096 3270 -2 481 208 285 27 chr4 5351516 5351776 -196976571 - MLT1G1 LTR MaLR -24 571 245 355 260 12 8 chr4 5352150 5352275 -196976072 + MIR3 SINE MIR 70 196 -12 828 264 57 31 chr4 5353202 5353554 -196974793 + HAL1 LINE L1 2 362 -2145 4528 44 2 0 chr4 5353571 5354090 -196974257 - L1PA3 LINE L1 -3 6152 5633 11417 35 1 1 chr4 5354190 5355572 -196972775 - L1PA3 LINE L1 -2076 4070 2689 1397 301 118 27 chr4 5355573 5356526 -196971821 + HAL1 LINE L1 360 1398 -1109 255 271 57 0 chr4 5356529 5356599 -196971748 + HAL1 LINE L1 1434 1507 -1000 1690 189 6 31 chr4 5356599 5356917 -196971430 - AluJb SINE Alu 0 312 3 1494 262 75 74 chr4 5356952 5357861 -196970486 + HAL1 LINE L1 1596 2505 -2 2912 185 24 2 chr4 5358469 5358978 -196969369 + MLT2B1 LTR ERVL 1 520 0 257 192 0 39 chr4 5359222 5359274 -196969073 + MARNA DNA Mariner 64 113 -473 249 317 38 59 chr4 5359299 5359485 -196968862 + MIR SINE MIR 46 227 -35 343 316 53 36 chr4 5359523 5359748 -196968599 - MARNA DNA Mariner -173 413 185 200 253 0 35 chr4 5360378 5360465 -196967882 + (TA)n Simple_repeat Simple_repeat 1 84 0 203 189 57 0 chr4 5360510 5360563 -196967784 - MIR SINE MIR -58 204 149 6721 150 40 9 chr4 5360668 5363672 -196964675 - L1PBa LINE L1 -2396 4466 1311 618 115 353 0 chr4 5363674 5363796 -196964551 - L1PBa LINE L1 -5704 1159 995 * 1203 143 10 0 chr4 5363792 5363988 -196964359 - L1PBa LINE L1 -6665 198 1 209 311 66 9 chr4 5363993 5364099 -196964248 + MIR SINE MIR 82 193 -69 423 305 31 16 chr4 5364186 5364314 -196964033 + L2 LINE L2 3180 3309 -4 7515 148 15 24 chr4 5364322 5365463 -196962884 + L1MA5 LINE L1 3984 5135 -1165 2224 120 0 0 chr4 5365463 5365764 -196962583 + AluSx SINE Alu 1 301 -11 7515 148 15 24 chr4 5365764 5366958 -196961389 + L1MA5 LINE L1 5135 6298 -2 1615 247 50 8 chr4 5366958 5367481 -196960866 + L1M4 LINE L1 3080 3624 -2522 29 47 0 0 chr4 5367481 5367524 -196960823 + AT_rich Low_complexity Low_complexity 1 43 0 407 202 59 17 chr4 5367718 5367837 -196960510 - L1M4 LINE L1 -1015 5131 5008 22 0 0 0 chr4 5367837 5367859 -196960488 + AT_rich Low_complexity Low_complexity 1 22 0 5969 25 3 9 chr4 5367865 5368533 -196959814 - L1PA3 LINE L1 0 6155 5492 537 198 58 0 chr4 5368535 5368656 -196959691 + L1M4 LINE L1 3619 3746 -2400 290 273 114 30 chr4 5368959 5369091 -196959256 + L2 LINE L2 3171 3313 0 262 180 34 79 chr4 5369108 5369197 -196959150 - MIR SINE MIR 0 262 178 203 250 50 0 chr4 5369894 5369954 -196958393 - MIR SINE MIR -12 250 188 367 284 132 56 chr4 5369961 5370158 -196958189 - MIR SINE MIR -3 259 48 269 206 0 15 chr4 5370269 5370337 -196958010 + (CATATA)n Simple_repeat Simple_repeat 1 67 0 329 264 195 38 chr4 5371104 5371263 -196957084 - MIR3 SINE MIR -4 204 21 578 243 104 30 chr4 5371754 5371956 -196956391 + MIR SINE MIR 46 262 0 221 338 68 0 chr4 5372358 5372432 -196955915 + L2 LINE L2 3101 3179 -93 335 286 209 5 chr4 5372501 5372707 -196955640 + MIR SINE MIR 10 257 -5 410 333 117 0 chr4 5373476 5373647 -196954700 + L2 LINE L2 2771 2961 -353 5367 258 116 29 chr4 5373689 5375613 -196952734 + L1ME1 LINE L1 816 2573 -4368 984 229 19 19 chr4 5375613 5375823 -196952524 - MER63A DNA MER1_type 0 210 1 5367 258 116 29 chr4 5375823 5376327 -196952020 + L1ME1 LINE L1 2573 3032 -3909 2340 103 0 3 chr4 5376327 5376637 -196951710 - AluY SINE Alu -2 309 1 5367 258 116 29 chr4 5376637 5377748 -196950599 + L1ME1 LINE L1 3032 4833 -2108 588 161 0 0 chr4 5377781 5377874 -196950473 + HY3 scRNA scRNA 4 96 -5 2850 213 97 38 chr4 5377894 5378048 -196950299 + L1ME1 LINE L1 5967 6110 -851 1851 131 57 17 chr4 5378048 5378346 -196950001 - AluSx SINE Alu -2 310 1 2850 213 97 38 chr4 5378346 5379115 -196949232 + L1ME1 LINE L1 6110 6952 -9 391 288 31 49 chr4 5379122 5379285 -196949062 + L2 LINE L2 3140 3299 -14 234 0 0 0 chr4 5379286 5379312 -196949035 + (TGAA)n Simple_repeat Simple_repeat 1 26 0 233 234 138 21 chr4 5379322 5379416 -196948931 + MIR SINE MIR 20 124 -138 7458 172 156 13 chr4 5379458 5380956 -196947391 - MER52A LTR ERV1 0 1755 44 220 321 74 0 chr4 5381123 5381204 -196947143 + L2 LINE L2 3136 3222 -50 216 329 12 12 chr4 5381266 5381348 -196946999 - MIR SINE MIR -19 243 162 674 155 30 37 chr4 5381730 5381963 -196946384 + AluJb SINE Alu 35 312 0 366 274 183 0 chr4 5382410 5382574 -196945773 - MIR SINE MIR 0 262 69 218 311 120 24 chr4 5383525 5383655 -196944692 + MIR SINE MIR 77 228 -34 2107 159 26 34 chr4 5383655 5384033 -196944314 - THE1C LTR MaLR 0 375 1 218 311 120 24 chr4 5384033 5384069 -196944278 + MIR SINE MIR 228 259 -3 510 257 11 75 chr4 5384252 5384439 -196943908 + MLT1D LTR MaLR 14 188 -438 14925 205 70 13 chr4 5384439 5384494 -196943853 + L1MA4A LINE L1 5 55 -6950 1915 136 59 56 chr4 5384494 5384868 -196943479 + THE1C LTR MaLR 1 375 0 14925 205 70 13 chr4 5384868 5387966 -196940381 + L1MA4A LINE L1 55 2974 -4031 189 0 0 0 chr4 5387966 5387987 -196940360 + (CAA)n Simple_repeat Simple_repeat 2 22 0 14925 205 70 13 chr4 5387987 5391174 -196937173 + L1MA4A LINE L1 2974 6746 -259 2073 123 3 0 chr4 5391174 5391458 -196936889 - AluSx SINE Alu -27 285 1 14925 205 70 13 chr4 5391458 5391727 -196936620 + L1MA4A LINE L1 6746 6998 -7 27 29 0 0 chr4 5391727 5391761 -196936586 + AT_rich Low_complexity Low_complexity 1 34 0 924 184 161 11 chr4 5391774 5392044 -196936303 + MLT1D LTR MaLR 216 502 -3 217 267 105 23 chr4 5392047 5392133 -196936214 + MIR SINE MIR 159 251 -11 1091 204 13 44 chr4 5392433 5392658 -196935689 - MER20 DNA MER1_type 0 219 2 929 200 44 62 chr4 5393086 5393361 -196934986 - MLT1C LTR MaLR -197 270 1 2122 109 0 3 chr4 5393609 5393892 -196934455 + AluSq SINE Alu 2 283 -30 226 196 0 0 chr4 5393894 5393940 -196934407 - L1MC4 LINE L1 -1339 6703 6658 468 150 0 0 chr4 5393940 5394020 -196934327 + (CA)n Simple_repeat Simple_repeat 2 81 0 276 158 0 0 chr4 5395578 5395635 -196932712 + (CA)n Simple_repeat Simple_repeat 2 58 0 429 205 0 0 chr4 5396194 5396311 -196932036 + (TCCA)n Simple_repeat Simple_repeat 1 117 0 828 272 99 60 chr4 5396329 5396945 -196931402 - L2 LINE L2 -37 3276 2641 1329 115 0 0 chr4 5397545 5397728 -196930619 + AluSp SINE Alu 129 311 -2 2752 161 69 13 chr4 5397735 5398274 -196930073 - L1MB2 LINE L1 -10 6161 5593 1274 167 34 0 chr4 5398300 5398504 -196929843 - AluJb SINE Alu -47 265 55 477 266 198 54 chr4 5399343 5399711 -196928636 - LTR33A LTR ERVL -10 513 93 193 277 0 0 chr4 5400004 5400051 -196928296 + L2 LINE L2 3186 3232 -40 189 287 126 11 chr4 5400219 5400306 -196928041 - MIR SINE MIR -60 148 52 271 289 40 40 chr4 5400918 5401067 -196927280 + L2 LINE L2 2685 2833 -481 304 314 127 33 chr4 5401268 5401513 -196926834 - MLT1K LTR MaLR -182 406 139 2214 102 0 7 chr4 5401777 5402070 -196926277 - AluSq SINE Alu -22 291 1 238 327 113 24 chr4 5402122 5402290 -196926057 + L2 LINE L2 3104 3286 -27 189 308 84 63 chr4 5403031 5403174 -196925173 + MIR SINE MIR 70 215 -47 204 333 19 29 chr4 5403290 5403395 -196924952 + MIR SINE MIR 46 149 -113 235 322 66 25 chr4 5403771 5403892 -196924455 - MER5A DNA MER1_type -1 188 63 772 69 0 0 chr4 5404082 5404184 -196924163 - L1MA1 LINE L1 0 6302 6201 2062 157 13 24 chr4 5404969 5405346 -196923001 + MLT1B LTR MaLR 1 373 -17 585 254 21 0 chr4 5406109 5406251 -196922096 + MER45A DNA AcHobo 34 178 0 256 349 66 0 chr4 5406264 5406370 -196921977 - MIR SINE MIR -71 191 79 390 273 60 40 chr4 5406497 5406647 -196921700 + L2 LINE L2 3160 3312 -1 357 298 142 0 chr4 5406701 5406842 -196921505 - MIR SINE MIR -55 207 47 672 244 5 86 chr4 5407235 5407298 -196921049 + MIR SINE MIR 26 93 -169 1923 193 11 67 chr4 5407298 5407733 -196920614 - MLT2D LTR ERVL 0 414 4 672 244 5 86 chr4 5407733 5407890 -196920457 + MIR SINE MIR 93 228 -34 524 267 36 27 chr4 5408212 5408426 -196919921 - MIR SINE MIR -13 249 34 447 254 260 21 chr4 5409251 5409730 -196918617 - L2 LINE L2 0 3313 2713 200 310 0 0 chr4 5409783 5409841 -196918506 - L2 LINE L2 -774 2540 2483 1304 277 260 15 chr4 5409858 5410945 -196917402 - L2 LINE L2 -1938 1376 23 295 243 0 23 chr4 5411253 5411515 -196916832 + C-rich Low_complexity Low_complexity 1 255 0 317 306 67 40 chr4 5411881 5412055 -196916292 + MIR3 SINE MIR 12 190 -18 364 341 12 49 chr4 5412101 5412265 -196916082 + MIR3 SINE MIR 37 194 -14 281 331 111 94 chr4 5412712 5413072 -196915275 - L2 LINE L2 -8 3264 2899 421 303 43 33 chr4 5413135 5413184 -196915163 + MIR SINE MIR 20 67 -177 2335 100 6 3 chr4 5413184 5413495 -196914852 - AluSq SINE Alu -1 312 1 421 303 43 33 chr4 5413495 5413633 -196914714 + MIR SINE MIR 67 207 -37 228 244 309 24 chr4 5413776 5413899 -196914448 - MIR SINE MIR -5 257 100 301 255 29 29 chr4 5414471 5414573 -196913774 + L3b LINE CR1 1279 1380 -203 1871 198 7 44 chr4 5414739 5415144 -196913203 - MLT1B LTR MaLR 0 390 1 1490 250 70 2 chr4 5415160 5415616 -196912731 + MLT1D LTR MaLR 1 487 -18 277 282 12 12 chr4 5415629 5415714 -196912633 + MIR SINE MIR 162 246 -16 1076 243 36 30 chr4 5416154 5416406 -196911941 - MLT1C LTR MaLR -29 438 182 2228 109 23 7 chr4 5416406 5416710 -196911637 - AluY SINE Alu -2 309 1 1076 243 36 30 chr4 5416710 5416786 -196911561 - MLT1C LTR MaLR -285 182 108 269 143 175 0 chr4 5416873 5416936 -196911411 - MLT1C LTR MaLR -368 99 26 195 310 0 0 chr4 5417442 5417500 -196910847 - L2 LINE L2 -563 2751 2694 2033 125 32 0 chr4 5417609 5417888 -196910459 + AluSx SINE Alu 7 294 -18 240 261 144 27 chr4 5418113 5418224 -196910123 + MIR SINE MIR 105 228 -34 186 370 0 0 chr4 5418243 5418316 -196910031 + MIR SINE MIR 188 260 -2 317 324 82 34 chr4 5418725 5418845 -196909502 - MIR SINE MIR -25 237 101 2680 115 51 5 chr4 5418845 5419254 -196909093 - MSTA LTR MaLR 0 428 1 317 324 82 34 chr4 5419254 5419340 -196909007 - MIR SINE MIR -161 101 21 378 265 121 8 chr4 5420145 5420277 -196908070 - MIR SINE MIR -39 223 77 1104 278 44 54 chr4 5420280 5420784 -196907563 - MLT1E LTR MaLR -3 590 92 314 299 124 17 chr4 5420856 5421090 -196907257 + L2 LINE L2 2990 3248 -65 1210 221 95 52 chr4 5421523 5421966 -196906381 - MLT1C LTR MaLR 0 467 6 218 311 68 14 chr4 5422811 5422885 -196905462 - L2 LINE L2 -28 3285 3208 793 212 13 87 chr4 5423001 5423232 -196905115 - MER58C DNA MER1_type -1 214 1 469 278 69 0 chr4 5423971 5424115 -196904232 + MIR SINE MIR 47 200 -62 486 153 57 57 chr4 5424213 5424346 -196904001 - MER5A DNA MER1_type -53 136 4 287 272 130 0 chr4 5424357 5424449 -196903898 - MER5A DNA MER1_type 0 189 86 219 331 50 2 chr4 5425073 5425211 -196903136 + MIR SINE MIR 33 175 -76 373 293 121 0 chr4 5426250 5426366 -196901981 - L2 LINE L2 -2 3270 3141 325 234 184 96 chr4 5427234 5427712 -196900635 - MLT1H LTR MaLR -17 532 13 192 221 256 12 chr4 5427961 5428047 -196900300 - L2 LINE L2 -21 3251 3145 339 277 184 28 chr4 5428052 5428193 -196900154 - MER5B DNA MER1_type -5 173 11 2266 188 65 32 chr4 5428504 5429042 -196899305 + MER74A LTR ERVL 3 558 0 1376 196 110 6 chr4 5429576 5429893 -196898454 - MLT1C LTR MaLR -8 459 110 479 186 102 51 chr4 5430174 5430292 -196898055 - MLT1C LTR MaLR -343 124 1 2133 102 7 0 chr4 5430314 5430588 -196897759 - AluY SINE Alu -9 302 27 2119 138 22 43 chr4 5430859 5430943 -196897404 + MLT1A1 LTR MaLR 1 85 -280 2014 149 155 13 chr4 5430943 5431318 -196897029 - MSTA LTR MaLR 0 428 1 9075 178 42 1 chr4 5431325 5432911 -196895436 - MSTA-int LTR MaLR 0 1651 1 1844 138 121 87 chr4 5432911 5433325 -196895022 - MSTA LTR MaLR 0 428 1 2119 138 22 43 chr4 5433325 5433602 -196894745 + MLT1A1 LTR MaLR 89 363 -2 2154 146 125 8 chr4 5433655 5434038 -196894309 + MSTA LTR MaLR 1 428 0 268 301 36 0 chr4 5434598 5434681 -196893666 - LTR67 LTR ERVL -366 191 106 701 206 153 53 chr4 5436261 5436489 -196891858 - MLT1A1 LTR MaLR -41 324 74 2442 88 0 0 chr4 5436489 5436785 -196891562 - AluY SINE Alu -15 296 1 240 211 175 0 chr4 5436805 5436862 -196891485 - MER2 DNA MER2_type -1 344 278 914 203 9 42 chr4 5436921 5437138 -196891209 - MER2 DNA MER2_type -135 210 1 233 128 106 0 chr4 5437148 5437195 -196891152 - MLT1A1 LTR MaLR -311 54 3 * 567 250 27 7 chr4 5437195 5437334 -196891013 + MLT1A2 LTR MaLR 233 374 0 282 248 199 71 chr4 5438242 5438592 -196889755 + L2 LINE L2 2624 3063 -250 * 458 257 18 0 chr4 5438591 5438704 -196889643 - MIR SINE MIR -75 187 73 308 286 142 24 chr4 5438708 5438971 -196889376 - MLT1K LTR MaLR 0 588 327 282 258 0 0 chr4 5439058 5439155 -196889192 + L1MC/D LINE L1 5156 5252 -894 422 247 140 88 chr4 5439243 5439607 -196888740 + L1MC/D LINE L1 5429 5811 -1997 319 161 16 16 chr4 5439607 5439669 -196888678 - MER46C DNA MER2_type -1 337 276 28 61 0 0 chr4 5439677 5439726 -196888621 + AT_rich Low_complexity Low_complexity 1 49 0 454 241 76 0 chr4 5439770 5439915 -196888432 - MER46C DNA MER2_type -97 241 86 904 259 19 42 chr4 5440631 5440894 -196887453 - MIR SINE MIR -2 260 4 280 272 39 10 chr4 5441620 5441723 -196886624 + CT-rich Low_complexity Low_complexity 5 110 0 196 362 46 11 chr4 5442445 5442619 -196885728 + L2 LINE L2 2827 3006 -266 540 335 61 48 chr4 5442666 5443176 -196885171 - L1MEd LINE L1 -997 1267 69 485 269 210 31 chr4 5443177 5443530 -196884817 - MLT1H LTR MaLR -7 542 127 492 232 54 152 chr4 5445369 5445645 -196882702 - MIR SINE MIR 0 262 14 324 331 8 0 chr4 5445677 5445810 -196882537 - MARNA DNA Mariner -43 543 410 2057 126 0 53 chr4 5446340 5446530 -196881817 - AluSq SINE Alu 0 310 142 2445 87 0 3 chr4 5446530 5446840 -196881507 - AluY SINE Alu -2 309 1 2057 126 0 53 chr4 5446840 5446975 -196881372 - AluSq SINE Alu -168 142 1 623 290 44 11 chr4 5447245 5447428 -196880919 - MIR SINE MIR -72 190 2 325 340 89 49 chr4 5448075 5448501 -196879846 - L2 LINE L2 -3 3269 2827 300 295 23 54 chr4 5448827 5448956 -196879391 + MIR SINE MIR 119 243 -19 243 321 74 0 chr4 5449018 5449099 -196879248 - L2 LINE L2 -50 3222 3136 7201 175 158 12 chr4 5449270 5450761 -196877586 + MER52A LTR ERV1 48 1755 0 243 234 138 21 chr4 5450803 5450897 -196877450 - MIR SINE MIR -138 124 20 234 0 0 0 chr4 5450907 5450933 -196877414 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 438 282 31 49 chr4 5450934 5451097 -196877250 - L2 LINE L2 -14 3299 3140 2631 231 92 27 chr4 5451104 5451873 -196876474 - L1ME1 LINE L1 -9 6952 6105 1902 138 57 7 chr4 5451873 5452170 -196876177 + AluSx SINE Alu 1 312 0 2631 231 92 27 chr4 5452170 5452319 -196876028 - L1ME1 LINE L1 -856 6105 5967 549 161 0 0 chr4 5452339 5452432 -196875915 - HY3 scRNA scRNA -5 96 4 4866 262 114 28 chr4 5452465 5453576 -196874771 - L1ME1 LINE L1 -2108 4833 3819 2367 107 0 3 chr4 5453576 5453886 -196874461 + AluY SINE Alu 1 309 -2 4866 262 114 28 chr4 5453886 5454390 -196873957 - L1ME1 LINE L1 -3122 3819 3360 924 229 19 19 chr4 5454390 5454600 -196873747 + MER63A DNA MER1_type 1 210 0 4866 262 114 28 chr4 5454600 5456523 -196871824 - L1ME1 LINE L1 -3581 3360 816 405 333 117 0 chr4 5456565 5456736 -196871611 - L2 LINE L2 -353 2961 2771 354 289 204 5 chr4 5457499 5457710 -196870637 - MIR SINE MIR 0 262 10 217 338 68 0 chr4 5457779 5457853 -196870494 - L2 LINE L2 -93 3179 3101 606 263 117 29 chr4 5458252 5458492 -196869855 - MIR SINE MIR 0 262 2 233 328 172 38 chr4 5458518 5458884 -196869463 - L2 LINE L2 -627 2687 2273 348 264 195 38 chr4 5458933 5459092 -196869255 + MIR3 SINE MIR 21 204 -4 311 269 8 76 chr4 5459841 5459960 -196868387 + L1MC4 LINE L1 6622 6732 -1310 428 274 132 56 chr4 5460036 5460233 -196868114 + MIR SINE MIR 48 259 -3 214 250 50 0 chr4 5460240 5460300 -196868047 + MIR SINE MIR 188 250 -12 260 366 27 9 chr4 5460373 5460485 -196867862 + MIR SINE MIR 24 137 -71 272 180 34 79 chr4 5461002 5461091 -196867256 + MIR SINE MIR 178 262 0 318 280 114 30 chr4 5461108 5461240 -196867107 - L2 LINE L2 0 3313 3171 197 336 50 17 chr4 5461372 5461491 -196866856 - L2 LINE L2 -209 3063 2941 257 262 94 60 chr4 5462190 5462339 -196866008 + MIR3 SINE MIR 33 186 -22 184 346 0 0 chr4 5462438 5462490 -196865857 - L2 LINE L2 -14 3258 3207 690 254 50 35 chr4 5462578 5462661 -196865686 + MIR SINE MIR 28 108 -154 1453 241 81 27 chr4 5462661 5463104 -196865243 - MLT1C LTR MaLR 0 467 1 690 254 50 35 chr4 5463104 5463221 -196865126 + MIR SINE MIR 108 231 -31 41271 36 22 1 chr4 5464052 5470079 -196858268 - L1PA2 LINE L1 0 6155 1 571 257 41 53 chr4 5470116 5470287 -196858060 - MIR SINE MIR 0 262 94 225 223 155 58 chr4 5470467 5470570 -196857777 + MIR SINE MIR 29 141 -67 1312 163 8 31 chr4 5471096 5471354 -196856993 - L1MB5 LINE L1 0 6174 5923 1973 133 33 0 chr4 5471734 5472034 -196856313 + AluSq SINE Alu 1 310 -3 349 336 29 14 chr4 5472399 5472539 -196855808 - MIR3 SINE MIR -49 159 18 1973 133 3 30 chr4 5472796 5473097 -196855250 + AluJb SINE Alu 1 293 -19 211 243 30 52 chr4 5473160 5473259 -196855088 + MIR SINE MIR 99 200 -8 184 287 176 0 chr4 5473413 5473521 -196854826 + L2 LINE L2 3146 3272 0 23 33 0 0 chr4 5474062 5474092 -196854255 + AT_rich Low_complexity Low_complexity 1 30 0 1997 122 3 14 chr4 5474510 5474804 -196853543 + AluSx SINE Alu 1 291 -21 3419 116 25 26 chr4 5475007 5475535 -196852812 + MER1A DNA MER1_type 1 527 0 442 327 7 20 chr4 5475852 5476002 -196852345 - L3 LINE CR1 -89 1488 1341 302 353 14 43 chr4 5476034 5476241 -196852106 + MIR SINE MIR 51 251 -11 445 250 74 23 chr4 5476400 5476576 -196851771 + MIR SINE MIR 49 233 -29 257 339 35 9 chr4 5476809 5476924 -196851423 - L2 LINE L2 -477 2837 2720 * 393 286 124 57 chr4 5476921 5477064 -196851283 + MIR SINE MIR 6 169 -93 1280 164 19 5 chr4 5477064 5477277 -196851070 - MER20 DNA MER1_type -3 216 1 393 286 124 57 chr4 5477277 5477343 -196851004 + MIR SINE MIR 169 229 -33 192 345 36 0 chr4 5478110 5478165 -196850182 + MIR3 SINE MIR 133 189 -19 195 42 0 0 chr4 5478672 5478696 -196849651 + (GA)n Simple_repeat Simple_repeat 2 25 0 269 233 0 0 chr4 5478883 5478943 -196849404 + MIR SINE MIR 88 147 -61 2188 122 0 3 chr4 5479072 5479367 -196848980 + AluSq SINE Alu 1 294 -19 203 288 34 0 chr4 5479536 5479595 -196848752 + L2 LINE L2 3136 3196 -76 1448 177 59 67 chr4 5479703 5480076 -196848271 - MLT1B LTR MaLR -20 370 1 239 299 0 0 chr4 5480149 5480216 -196848131 + MIR SINE MIR 115 181 -81 235 318 65 9 chr4 5481171 5481278 -196847069 - L2 LINE L2 -24 3248 3136 243 292 14 0 chr4 5481940 5482012 -196846335 + MIR SINE MIR 22 94 -168 2668 54 0 6 chr4 5482652 5482965 -196845382 - AluY SINE Alu 0 311 1 1984 102 11 25 chr4 5483036 5483319 -196845028 + AluSp SINE Alu 1 279 -34 575 129 0 10 chr4 5483337 5483438 -196844909 + (GGAA)n Simple_repeat Simple_repeat 1 100 0 792 207 40 6 chr4 5483484 5483658 -196844689 + MER5A DNA MER1_type 1 180 -9 479 311 21 31 chr4 5483844 5484037 -196844310 - MIR SINE MIR -70 192 2 926 127 0 182 chr4 5484095 5484331 -196844016 - 7SK RNA RNA 0 193 1 311 261 35 49 chr4 5484353 5484495 -196843852 + MER5B DNA MER1_type 1 140 -38 208 335 99 13 chr4 5484801 5484953 -196843394 - MIR3 SINE MIR -24 184 20 187 273 91 57 chr4 5485303 5485391 -196842956 + MIR SINE MIR 55 145 -63 469 320 120 27 chr4 5486063 5486434 -196841913 - L2 LINE L2 -223 3090 2685 618 242 3 0 chr4 5487516 5487869 -196840478 + (TG)n Simple_repeat Simple_repeat 1 354 0 780 217 49 0 chr4 5488135 5488319 -196840028 - MER20 DNA MER1_type -24 195 3 317 260 0 6 chr4 5488933 5489114 -196839233 + (CA)n Simple_repeat Simple_repeat 1 180 0 2067 183 46 0 chr4 5489342 5489736 -196838611 - MSTB LTR MaLR 0 426 15 435 343 157 0 chr4 5490051 5490261 -196838086 - MIR SINE MIR -1 261 19 201 74 0 0 chr4 5490310 5490337 -196838010 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 412 244 193 10 chr4 5490652 5490849 -196837498 - MIR SINE MIR -10 252 20 341 294 87 38 chr4 5491016 5491255 -196837092 - MIR SINE MIR -12 250 1 419 297 143 6 chr4 5491289 5491464 -196836883 - MIR SINE MIR -7 255 57 348 255 20 29 chr4 5491764 5491866 -196836481 + L1ME4a LINE L1 5800 5900 -221 278 141 16 47 chr4 5492587 5492641 -196835706 + ORSL DNA AcHobo 1 54 -221 1365 247 70 20 chr4 5492641 5493086 -196835261 - MLT1C LTR MaLR 0 467 1 302 267 67 0 chr4 5493820 5493895 -196834452 + MIR SINE MIR 14 93 -169 2339 59 42 3 chr4 5494231 5494518 -196833829 + AluY SINE Alu 1 298 -13 237 321 130 41 chr4 5494724 5494970 -196833377 - L2 LINE L2 -90 3182 2915 2054 180 69 7 chr4 5496629 5497069 -196831278 + MLT1C LTR MaLR 1 467 0 194 360 12 0 chr4 5497081 5497167 -196831180 + MER5A DNA MER1_type 80 166 -23 279 345 18 0 chr4 5497372 5497482 -196830865 - LTR16C LTR ERVL -287 204 93 996 163 98 25 chr4 5498298 5498501 -196829846 - MER20 DNA MER1_type -1 218 1 198 286 209 9 chr4 5498632 5498737 -196829610 - L2 LINE L2 0 3313 3188 408 258 86 7 chr4 5498879 5499030 -196829317 - MIR SINE MIR -72 190 28 2318 104 3 0 chr4 5499283 5499582 -196828765 + AluSx SINE Alu 1 300 -12 241 289 59 17 chr4 5499727 5499859 -196828488 + MIR3 SINE MIR 25 161 -47 2375 79 0 16 chr4 5500590 5500894 -196827453 + AluSg SINE Alu 1 299 -11 1912 122 4 0 chr4 5500905 5501160 -196827187 + AluSx SINE Alu 39 294 -18 2356 80 6 26 chr4 5501337 5501650 -196826697 - AluSq SINE Alu -6 307 1 949 215 45 126 chr4 5502047 5502555 -196825792 + MLT1C LTR MaLR 1 467 0 640 293 90 24 chr4 5502998 5503332 -196825015 - MLT1I LTR MaLR -50 359 4 281 336 66 8 chr4 5504243 5504499 -196823848 - LTR33 LTR ERVL -241 280 10 2394 100 3 0 chr4 5504514 5504869 -196823478 - AluSx SINE Alu 0 356 1 416 300 53 87 chr4 5504882 5505182 -196823165 + L3 LINE CR1 1251 1540 -37 599 228 178 15 chr4 5505350 5505547 -196822800 + MIR SINE MIR 13 241 -21 2794 54 3 40 chr4 5505664 5506037 -196822310 - MER4E LTR ERV1 0 766 408 43870 47 1 1 chr4 5506037 5512155 -196816192 - L1PA4 LINE L1 -5 6150 30 1322 200 0 8 chr4 5512203 5512443 -196815904 - MER65C LTR ERV1 -41 420 183 377 118 0 0 chr4 5512449 5512500 -196815847 - MER65C LTR ERV1 -410 51 1 638 333 57 41 chr4 5512502 5512995 -196815352 - MER65C-int LTR ERV1 -2 4869 4369 1501 274 74 14 chr4 5513112 5513531 -196814816 - MER65C-int LTR ERV1 -779 4092 3649 1619 107 5 0 chr4 5513548 5513763 -196814584 + AluSg/x SINE Alu 82 297 -15 291 139 0 0 chr4 5513772 5513815 -196814532 + tRNA-Gln-CAG tRNA tRNA 1 43 -32 3326 197 60 77 chr4 5513816 5515050 -196813297 - MER65C-int LTR ERV1 -3125 3473 1037 699 137 0 0 chr4 5515052 5515192 -196813155 - AluSc SINE Alu 0 317 178 1240 197 45 74 chr4 5515193 5515562 -196812785 - MER65-int LTR ERV1 -2902 1969 1612 2307 98 7 0 chr4 5515562 5515857 -196812490 - AluSx SINE Alu -15 297 1 1240 197 45 74 chr4 5515857 5515908 -196812439 - MER65-int LTR ERV1 -3259 1612 1561 44458 40 6 2 chr4 5516028 5522149 -196806198 - L1PA3 LINE L1 -3 6152 7 521 257 43 53 chr4 5522156 5522343 -196806004 - MER34 LTR ERV1 -319 223 39 282 154 0 58 chr4 5522629 5522681 -196805666 - LTR57-int LTR ERVL -4992 351 303 305 307 57 17 chr4 5523412 5523588 -196804759 - MIR SINE MIR -26 236 54 402 301 7 15 chr4 5523885 5524021 -196804326 + L2 LINE L2 3136 3270 -2 215 277 208 10 chr4 5524137 5524238 -196804109 - MIR SINE MIR -109 153 33 496 231 52 15 chr4 5524642 5524776 -196803571 + MIR3 SINE MIR 17 155 -53 426 278 28 45 chr4 5525587 5525793 -196802554 + MIR SINE MIR 1 205 -57 25 0 0 0 chr4 5526099 5526124 -196802223 + AT_rich Low_complexity Low_complexity 1 25 0 746 212 7 0 chr4 5527636 5527782 -196800565 + MER58B DNA MER1_type 195 341 0 1958 140 164 32 chr4 5528016 5528359 -196799988 - MSTA LTR MaLR 0 428 28 2012 130 0 7 chr4 5528359 5528665 -196799682 + AluSx SINE Alu 1 304 0 1958 140 164 32 chr4 5528665 5528698 -196799649 - MSTA LTR MaLR -400 28 1 1761 199 70 3 chr4 5529387 5529729 -196798618 + MLT1A1 LTR MaLR 1 365 0 386 285 148 54 chr4 5530565 5530935 -196797412 - L2 LINE L2 -284 2988 2590 843 286 68 39 chr4 5531542 5531624 -196796723 - MLT1L LTR MaLR -14 601 523 1663 194 0 9 chr4 5531624 5531939 -196796408 + AluJo SINE Alu 1 312 0 843 286 68 39 chr4 5531939 5532342 -196796005 - MLT1L LTR MaLR -92 523 102 339 321 44 0 chr4 5532706 5532843 -196795504 - MIR SINE MIR -6 256 114 256 204 0 0 chr4 5533085 5533129 -196795218 + MLT1F1 LTR MaLR 82 125 -442 2636 219 14 10 chr4 5533129 5533719 -196794628 + L1MD3 LINE L1 7404 7995 0 411 273 64 52 chr4 5534073 5534340 -196794007 + HAL1 LINE L1 801 1070 -1437 312 203 29 94 chr4 5534315 5534453 -196793894 + L1MA4 LINE L1 6165 6293 -7 * 6637 180 19 20 chr4 5534532 5536421 -196791926 + L1PA16 LINE L1 3895 5779 -387 1952 169 0 0 chr4 5536421 5536728 -196791619 + AluSx SINE Alu 1 307 -5 6637 180 19 20 chr4 5536728 5537114 -196791233 + L1PA16 LINE L1 5779 6164 -2 573 316 33 9 chr4 5537169 5537381 -196790966 - MIR SINE MIR 0 262 46 2556 117 14 0 chr4 5537461 5537820 -196790527 - THE1B LTR MaLR 0 364 1 10126 111 60 2 chr4 5537820 5539314 -196789033 - THE1B-int LTR MaLR 0 1580 1 2408 135 6 6 chr4 5539314 5539678 -196788669 - THE1B LTR MaLR 0 364 1 557 251 35 18 chr4 5540006 5540177 -196788170 - MER69A DNA AcHobo -2 175 2 1456 206 102 75 chr4 5540469 5540751 -196787596 - MER34 LTR ERV1 -9 533 235 2571 53 0 31 chr4 5540751 5541072 -196787275 + AluY SINE Alu 1 311 0 1456 206 102 75 chr4 5541072 5541191 -196787156 - MER34 LTR ERV1 -307 235 121 8552 202 54 29 chr4 5541191 5541627 -196786720 - MER34-int LTR ERV1 -250 4686 4262 2126 122 11 63 chr4 5541627 5541989 -196786358 + MER61A LTR ERV1 1 343 0 8552 202 54 29 chr4 5541989 5543631 -196784716 - MER34-int LTR ERV1 -674 4262 2556 27168 39 9 0 chr4 5543631 5549425 -196778922 + L1PA4 LINE L1 2 5832 -323 749 54 0 0 chr4 5549460 5549553 -196778794 + L1PA4 LINE L1 6054 6146 -9 402 194 101 36 chr4 5549560 5549699 -196778648 - MER34-int LTR ERV1 -3558 1378 1231 294 281 52 44 chr4 5550018 5550153 -196778194 - MER34-int LTR ERV1 -6147 654 519 1342 186 129 73 chr4 5550166 5550614 -196777733 - MER66A LTR ERV1 0 601 100 2528 201 44 2 chr4 5551049 5551546 -196776801 - MER34 LTR ERV1 0 542 25 659 290 47 53 chr4 5551893 5552345 -196776002 + LTR16A1 LTR ERVL 4 452 -5 189 259 155 0 chr4 5552365 5552423 -196775924 - L2 LINE L2 -65 3207 3141 365 301 81 0 chr4 5553103 5553239 -196775108 - MIR SINE MIR -70 192 46 235 312 0 0 chr4 5553342 5553419 -196774928 + MIR SINE MIR 176 252 -10 243 250 0 0 chr4 5553434 5553518 -196774829 + (CTG)n Simple_repeat Simple_repeat 3 86 0 383 309 17 11 chr4 5553524 5553760 -196774587 + (TTG)n Simple_repeat Simple_repeat 1 237 0 381 276 19 12 chr4 5554066 5554389 -196773958 + (TTG)n Simple_repeat Simple_repeat 1 325 0 232 324 124 0 chr4 5554990 5555095 -196773252 + L2 LINE L2 3150 3267 -5 2206 104 20 0 chr4 5555266 5555563 -196772784 - AluSq SINE Alu -10 303 1 1227 188 38 15 chr4 5555871 5556132 -196772215 - L1MA9 LINE L1 -38 6274 6008 352 221 26 62 chr4 5556465 5556578 -196771769 - MIR SINE MIR -68 194 86 312 163 0 0 chr4 5556682 5556731 -196771616 - MLT2D LTR ERVL 0 414 366 1340 143 177 33 chr4 5556735 5556842 -196771505 + MER2 DNA MER2_type 3 93 -252 3525 125 9 24 chr4 5556842 5557377 -196770970 + MER1A DNA MER1_type 1 527 0 1340 143 177 33 chr4 5557377 5557569 -196770778 + MER2 DNA MER2_type 93 345 0 1652 203 72 6 chr4 5557569 5557918 -196770429 - MLT2D LTR ERVL -42 372 1 1125 249 76 15 chr4 5558442 5559015 -196769332 - L2 LINE L2 0 3313 2700 741 301 115 8 chr4 5559191 5559603 -196768744 - L2 LINE L2 -204 3109 2655 279 314 51 8 chr4 5559691 5559809 -196768538 + L2 LINE L2 3189 3311 -2 294 95 0 0 chr4 5559810 5559852 -196768495 + (TGGA)n Simple_repeat Simple_repeat 1 42 0 207 0 0 0 chr4 5560269 5560292 -196768055 + (A)n Simple_repeat Simple_repeat 1 23 0 495 306 39 69 chr4 5560544 5560904 -196767443 - LTR67 LTR ERVL -124 433 85 1020 129 14 37 chr4 5560912 5561048 -196767299 - MLT1A2 LTR MaLR -1 373 235 345 47 0 0 chr4 5561048 5561091 -196767256 + (GA)n Simple_repeat Simple_repeat 2 44 0 1020 129 14 37 chr4 5561091 5561273 -196767074 - MLT1A2 LTR MaLR -139 235 1 281 50 25 0 chr4 5561380 5561420 -196766927 + L2 LINE L2 3214 3254 -18 21 36 0 0 chr4 5561833 5561861 -196766486 + AT_rich Low_complexity Low_complexity 1 28 0 2541 65 0 0 chr4 5561953 5562247 -196766100 + AluY SINE Alu 1 294 -17 302 230 73 51 chr4 5562254 5562432 -196765915 + L1MC/D LINE L1 5258 5439 -2369 1853 244 54 9 chr4 5562448 5563212 -196765135 + L1ME1 LINE L1 60 897 -5499 2508 237 50 35 chr4 5563213 5565227 -196763120 + L1ME1 LINE L1 3028 5212 -1023 216 0 0 0 chr4 5565227 5565251 -196763096 + (CA)n Simple_repeat Simple_repeat 2 25 0 2508 237 50 35 chr4 5565251 5566284 -196762063 + L1ME1 LINE L1 5212 6228 -7 318 315 0 0 chr4 5566294 5566386 -196761961 + L1MC/D LINE L1 5427 5518 -2290 21 0 0 0 chr4 5566480 5566501 -196761846 + AT_rich Low_complexity Low_complexity 1 21 0 597 278 128 18 chr4 5566645 5566926 -196761421 - L2 LINE L2 -3 3310 2999 270 336 0 9 chr4 5567110 5567220 -196761127 + MIR SINE MIR 45 153 -55 375 257 83 0 chr4 5567229 5567338 -196761009 - L2 LINE L2 -3 3269 3152 952 201 67 48 chr4 5567341 5567610 -196760737 + MLT1A2 LTR MaLR 2 275 -99 1800 164 0 11 chr4 5567624 5567911 -196760436 + AluJb SINE Alu 5 288 -24 586 254 31 21 chr4 5568025 5568218 -196760129 + MIR SINE MIR 34 228 -34 189 107 0 0 chr4 5570634 5570662 -196757685 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 385 247 55 41 chr4 5570768 5570914 -196757433 + MIR SINE MIR 8 155 -107 251 229 41 82 chr4 5571063 5571185 -196757162 + MLT1J2 LTR MaLR 3 119 -331 6838 36 0 1 chr4 5571374 5572176 -196756171 + L1PA4 LINE L1 5352 6152 -3 7074 183 169 16 chr4 5572235 5573751 -196754596 + MER52A LTR ERV1 1 1749 -6 504 224 131 90 chr4 5573768 5574013 -196754334 + MLT1J LTR MaLR 257 511 0 471 219 31 25 chr4 5574206 5574366 -196753981 - L1ME4a LINE L1 -2 6119 5959 437 110 14 0 chr4 5574387 5574460 -196753887 + (TTCC)n Simple_repeat Simple_repeat 1 74 0 277 306 39 54 chr4 5574668 5574919 -196753428 - MIR SINE MIR -5 257 9 260 211 211 0 chr4 5575034 5575129 -196753218 - MIR SINE MIR -116 146 32 1967 126 99 15 chr4 5575245 5575579 -196752768 + THE1B LTR MaLR 3 364 0 12400 79 6 0 chr4 5575579 5577145 -196751202 + THE1B-int LTR MaLR 1 1575 -5 2339 99 51 26 chr4 5577151 5577503 -196750844 + THE1B LTR MaLR 4 364 0 699 285 52 38 chr4 5577505 5577874 -196750473 - HAL1 LINE L1 -100 2407 2034 397 219 31 0 chr4 5577871 5577967 -196750380 + L1MC5 LINE L1 7690 7788 -173 * 597 309 78 25 chr4 5578110 5578430 -196749917 + L1MEc LINE L1 208 544 -5852 2619 115 33 14 chr4 5578476 5578895 -196749452 - MSTA LTR MaLR -1 427 1 700 199 97 58 chr4 5578963 5579189 -196749158 + L1MB8 LINE L1 5944 6178 0 729 288 30 9 chr4 5579190 5579527 -196748820 + L1MEc LINE L1 673 1016 -5380 1454 272 67 54 chr4 5579556 5580170 -196748177 + L1MCb LINE L1 3 624 -5421 481 171 29 19 chr4 5580197 5580302 -196748045 - L1MC5 LINE L1 -173 7788 7683 * 623 265 65 33 chr4 5580290 5580468 -196747879 + HAL1 LINE L1 2034 2224 -283 234 0 0 0 chr4 5580468 5580494 -196747853 + (TG)n Simple_repeat Simple_repeat 2 27 0 623 265 65 33 chr4 5580494 5580560 -196747787 + HAL1 LINE L1 2224 2286 -221 8547 242 42 19 chr4 5580606 5581348 -196746999 + L1MCb LINE L1 2442 3166 -3398 2278 110 0 7 chr4 5581348 5581656 -196746691 + AluSg SINE Alu 1 306 -4 8547 242 42 19 chr4 5581656 5583736 -196744611 + L1MCb LINE L1 3166 5284 -1280 5881 157 34 81 chr4 5583735 5584361 -196743986 + L1MC3 LINE L1 5914 6443 -1342 * 1659 192 27 3 chr4 5584361 5584485 -196743862 + AluJb SINE Alu 1 121 -191 216 0 0 0 chr4 5584485 5584509 -196743838 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1659 192 27 3 chr4 5584509 5584681 -196743666 + AluJb SINE Alu 121 304 -8 5881 157 34 81 chr4 5584681 5585396 -196742951 + L1MC3 LINE L1 6443 7191 -594 1988 131 38 35 chr4 5585738 5586104 -196742243 - THE1C LTR MaLR -8 367 1 23 0 0 0 chr4 5586124 5586147 -196742200 + AT_rich Low_complexity Low_complexity 1 23 0 331 303 127 21 chr4 5586204 5586346 -196742001 - MIR SINE MIR -74 188 32 229 265 61 41 chr4 5586699 5586797 -196741550 - MIR SINE MIR -162 100 1 273 346 31 25 chr4 5587104 5587263 -196741084 + MIR SINE MIR 37 196 -66 352 288 11 34 chr4 5587585 5587718 -196740629 + MIR SINE MIR 16 150 -58 575 225 46 101 chr4 5588745 5588800 -196739547 - MER63A DNA MER1_type -1478 210 154 2022 131 17 3 chr4 5588800 5589090 -196739257 - AluSc SINE Alu -15 294 1 575 225 46 101 chr4 5589090 5589252 -196739095 - MER63A DNA MER1_type -1534 154 5 298 206 0 29 chr4 5589711 5589779 -196738568 - L3 LINE CR1 -533 1044 979 32831 39 7 1 chr4 5590527 5595260 -196733087 + L1PA4 LINE L1 1388 6150 -5 832 70 9 0 chr4 5595260 5595374 -196732973 + MER4E LTR ERV1 408 522 -244 254 295 51 0 chr4 5795379 5795457 -196532890 + MIR SINE MIR 173 254 -8 867 246 188 56 chr4 5796540 5797164 -196531183 + L2 LINE L2 2573 3313 0 317 308 11 11 chr4 5797203 5797294 -196531053 + MIR3 SINE MIR 8 98 -110 208 349 0 0 chr4 5797478 5797541 -196530806 + (ATG)n Simple_repeat Simple_repeat 2 64 0 817 157 29 34 chr4 5797544 5797742 -196530605 + MER6 DNA MER2_type -65 865 0 466 163 24 91 chr4 5797777 5797953 -196530394 - MIR SINE MIR 0 262 101 526 162 0 20 chr4 5798161 5798260 -196530087 - MER3 DNA MER1_type -104 105 9 609 308 59 26 chr4 5798316 5798621 -196529726 - L2 LINE L2 -3 3310 2996 1150 286 175 25 chr4 5798624 5799340 -196529007 - L2 LINE L2 -506 2808 1986 1802 207 35 72 chr4 5799352 5799868 -196528479 + MLT1D LTR MaLR 3 499 -6 211 250 86 35 chr4 5799880 5799996 -196528351 - L2 LINE L2 -1340 1974 1853 243 247 214 11 chr4 5800276 5800365 -196527982 + L2 LINE L2 3166 3272 0 605 176 0 17 chr4 5800490 5800609 -196527738 - L1MC2 LINE L1 -9 6335 6219 2113 120 3 0 chr4 5800609 5800918 -196527429 - AluSx SINE Alu -2 310 1 1069 145 0 79 chr4 5800936 5801163 -196527184 - AluJo SINE Alu -12 300 92 1243 170 17 4 chr4 5801163 5801423 -196526924 - L1M3 LINE L1 -353 5818 5549 416 298 76 8 chr4 5802320 5802451 -196525896 - MIR3 SINE MIR -64 144 5 221 197 45 76 chr4 5802485 5802551 -196525796 - MIR SINE MIR -105 103 40 2281 76 0 20 chr4 5802727 5803031 -196525316 + AluY SINE Alu 1 298 -13 1596 205 58 54 chr4 5803467 5803970 -196524377 - MLT1D LTR MaLR 0 505 1 515 303 113 42 chr4 5803973 5804379 -196523968 - MLT1K LTR MaLR -28 560 126 327 296 30 54 chr4 5805115 5805316 -196523031 - MIR SINE MIR -47 215 21 2220 93 3 7 chr4 5805400 5805710 -196522637 - AluSc SINE Alu 0 309 1 373 299 36 7 chr4 5805827 5805964 -196522383 - MIR SINE MIR -81 181 41 722 286 15 0 chr4 5806762 5806958 -196521389 - MIR SINE MIR 0 262 64 1274 232 141 20 chr4 5807098 5807546 -196520801 - MLT1D LTR MaLR -2 503 1 196 239 0 0 chr4 5807570 5807616 -196520731 - L3 LINE CR1 -126 1451 1406 2822 9 0 0 chr4 5807875 5808190 -196520157 - AluYb8 SINE Alu -2 316 2 467 232 72 16 chr4 5808253 5808378 -196519969 + MIR SINE MIR 20 151 -111 833 165 0 0 chr4 5808449 5808582 -196519765 + FLAM_C SINE Alu 1 133 0 2899 194 14 45 chr4 5809890 5810510 -196517837 - MER77 LTR ERV1 0 605 5 299 242 23 117 chr4 5810553 5810817 -196517530 - L1MC4a LINE L1 -1777 6031 5793 226 241 19 0 chr4 5811693 5811747 -196516600 - MIR SINE MIR -32 230 176 246 216 91 0 chr4 5811893 5811981 -196516366 - L1MC4 LINE L1 0 8042 7947 401 271 26 58 chr4 5812291 5812446 -196515901 - MIR SINE MIR -105 157 8 376 230 11 0 chr4 5812479 5812566 -196515781 - MER117 DNA MER1_type -40 157 70 207 290 54 32 chr4 5812766 5812859 -196515488 + MIR SINE MIR 21 115 -147 185 350 41 0 chr4 5813333 5813430 -196514917 + MIR SINE MIR 110 210 -52 2013 120 0 0 chr4 5813490 5813802 -196514545 - AluSq SINE Alu 0 312 1 238 315 48 48 chr4 5814152 5814298 -196514049 + MIR SINE MIR 76 221 -41 718 177 0 0 chr4 5814431 5814555 -196513792 + FLAM_A SINE Alu 12 135 -7 330 26 0 0 chr4 5814652 5814691 -196513656 + (TG)n Simple_repeat Simple_repeat 2 40 0 309 266 13 25 chr4 5814694 5814773 -196513574 + L1MC4 LINE L1 6648 6725 -1317 482 279 95 54 chr4 5815435 5815750 -196512597 + HAL1 LINE L1 549 876 -1631 887 259 112 61 chr4 5815788 5816490 -196511857 + HAL1 LINE L1 961 1985 -522 1389 171 16 68 chr4 5816490 5816811 -196511536 + AluJo SINE Alu 1 304 -8 887 259 112 61 chr4 5816811 5817007 -196511340 + HAL1 LINE L1 1985 2169 -338 372 271 53 13 chr4 5817075 5817226 -196511121 + HAL1 LINE L1 2018 2174 -333 3022 110 43 0 chr4 5817816 5818080 -196510267 - L1P4 LINE L1 -412 5756 5464 1985 114 3 20 chr4 5818080 5818386 -196509961 - AluSq SINE Alu -12 301 1 3022 110 43 0 chr4 5818386 5818567 -196509780 - L1P4 LINE L1 -704 5464 5292 433 221 73 7 chr4 5818610 5818746 -196509601 - L1MC5 LINE L1 -753 7208 7064 1609 103 22 0 chr4 5819797 5820029 -196508318 + L1PA13 LINE L1 5927 6163 0 2642 158 16 5 chr4 5820165 5820647 -196507700 + L1MA4 LINE L1 5546 6045 -123 1911 79 0 0 chr4 5820684 5820924 -196507423 + AluSc SINE Alu 1 240 -69 320 287 11 0 chr4 5822122 5822209 -196506138 + MIR SINE MIR 86 173 -89 581 213 0 28 chr4 5822216 5822357 -196505990 - L1MA10 LINE L1 0 6334 6198 387 186 17 169 chr4 5822369 5822495 -196505852 - L1ME1 LINE L1 -174 5992 5895 2068 114 0 0 chr4 5822495 5822798 -196505549 - AluSx SINE Alu 0 303 1 387 186 17 169 chr4 5822798 5822841 -196505506 - L1ME1 LINE L1 -271 5895 5847 2049 247 144 25 chr4 5822958 5823769 -196504578 - HAL1 LINE L1 -1478 1029 122 419 194 43 21 chr4 5824088 5824181 -196504166 - MIR SINE MIR -100 162 68 3040 120 12 58 chr4 5824587 5825262 -196503085 - L1PA3 LINE L1 -3 6152 5509 2083 104 20 0 chr4 5825704 5826001 -196502346 - AluSq SINE Alu -10 303 1 1228 188 38 15 chr4 5826309 5826570 -196501777 - L1MA9 LINE L1 -38 6274 6008 406 221 26 62 chr4 5826903 5827016 -196501331 - MIR SINE MIR -68 194 86 313 163 0 0 chr4 5827120 5827169 -196501178 - MLT2D LTR ERVL 0 414 366 534 128 284 9 chr4 5827173 5827280 -196501067 + MER2 DNA MER2_type 3 139 -206 3221 106 7 28 chr4 5827280 5827741 -196500606 + MER1A DNA MER1_type 1 451 -78 1119 219 192 39 chr4 5828615 5828940 -196499407 + MLT1D LTR MaLR 1 411 -94 1035 206 0 0 chr4 5828940 5829163 -196499184 - L1MA4 LINE L1 -1 6299 6077 1119 219 192 39 chr4 5829163 5829275 -196499072 + MLT1D LTR MaLR 411 505 0 232 296 122 9 chr4 5829434 5829549 -196498798 + MIR SINE MIR 120 247 -15 243 269 0 0 chr4 5830249 5830301 -196498046 + MIR SINE MIR 209 260 -2 320 381 28 23 chr4 5831307 5831483 -196496864 + MIR SINE MIR 10 186 -76 243 0 0 0 chr4 5831523 5831550 -196496797 + (TA)n Simple_repeat Simple_repeat 1 27 0 * 306 0 0 0 chr4 5831549 5831583 -196496764 + (GA)n Simple_repeat Simple_repeat 2 35 0 748 215 48 27 chr4 5831584 5831770 -196496577 - MIR SINE MIR -72 190 1 204 244 22 0 chr4 5831789 5831834 -196496513 + L2 LINE L2 3210 3255 -17 532 237 14 3 chr4 5831935 5832294 -196496053 + (TGGA)n Simple_repeat Simple_repeat 1 363 0 544 237 23 62 chr4 5832620 5832877 -196495470 + Charlie3 DNA MER1_type 2458 2704 -6 414 115 33 0 chr4 5833013 5833074 -196495273 + MER2 DNA MER2_type 283 345 0 1667 203 72 6 chr4 5833074 5833423 -196494924 - MLT2D LTR ERVL -42 372 1 1301 249 76 15 chr4 5833947 5834520 -196493827 - L2 LINE L2 0 3313 2700 846 298 112 8 chr4 5834696 5835108 -196493239 - L2 LINE L2 -204 3109 2655 331 314 51 8 chr4 5835197 5835315 -196493032 + L2 LINE L2 3189 3311 -2 294 95 0 0 chr4 5835316 5835358 -196492989 + (TGGA)n Simple_repeat Simple_repeat 1 42 0 207 0 0 0 chr4 5835775 5835798 -196492549 + (A)n Simple_repeat Simple_repeat 1 23 0 517 306 39 69 chr4 5836050 5836410 -196491937 - LTR67 LTR ERVL -124 433 85 1027 129 14 37 chr4 5836418 5836554 -196491793 - MLT1A2 LTR MaLR -1 373 235 345 47 0 0 chr4 5836554 5836597 -196491750 + (GA)n Simple_repeat Simple_repeat 2 44 0 1027 129 14 37 chr4 5836597 5836779 -196491568 - MLT1A2 LTR MaLR -139 235 1 306 100 183 0 chr4 5836866 5836926 -196491421 + L2 LINE L2 3184 3254 -18 21 36 0 0 chr4 5837339 5837367 -196490980 + AT_rich Low_complexity Low_complexity 1 28 0 2418 61 0 0 chr4 5837459 5837753 -196490594 + AluY SINE Alu 1 294 -17 294 230 73 51 chr4 5837760 5837938 -196490409 + L1MC/D LINE L1 5258 5439 -2369 1901 246 50 19 chr4 5837954 5838719 -196489628 + L1ME1 LINE L1 60 897 -5499 2512 239 49 34 chr4 5838720 5840734 -196487613 + L1ME1 LINE L1 3028 5212 -1023 216 0 0 0 chr4 5840734 5840758 -196487589 + (CA)n Simple_repeat Simple_repeat 2 25 0 2512 239 49 34 chr4 5840758 5841791 -196486556 + L1ME1 LINE L1 5212 6228 -7 326 315 0 0 chr4 5841801 5841893 -196486454 + L1MC/D LINE L1 5427 5518 -2290 21 0 0 0 chr4 5841986 5842007 -196486340 + AT_rich Low_complexity Low_complexity 1 21 0 1112 226 33 7 chr4 5843382 5843554 -196484793 - L1MEc LINE L1 -4236 2160 1975 4154 93 35 10 chr4 5843554 5844145 -196484202 + MER4B LTR ERV1 5 610 0 1112 226 33 7 chr4 5844145 5844278 -196484069 - L1MEc LINE L1 -4421 1975 1847 1779 165 71 19 chr4 5844284 5844648 -196483699 - L1MB5 LINE L1 -8 6166 5784 1748 184 127 29 chr4 5844745 5845163 -196483184 - LTR2B LTR ERV1 0 490 32 4013 263 62 20 chr4 5845181 5845993 -196482354 - L1MEc LINE L1 -4631 1765 989 883 86 78 0 chr4 5845993 5846121 -196482226 + MER85 DNA T2_type 1 138 -1 4013 263 62 20 chr4 5846121 5846971 -196481376 - L1MEc LINE L1 -5407 989 36 437 184 31 20 chr4 5846971 5847069 -196481278 + MIR SINE MIR 162 260 -2 2879 149 7 2 chr4 5847494 5847931 -196480416 + MER72 LTR ERV1 6 444 -278 2236 114 64 9 chr4 5847931 5848274 -196480073 - THE1C LTR MaLR 0 375 14 2020 135 0 0 chr4 5848268 5848556 -196479791 + MER72 LTR ERV1 435 722 0 * 4154 175 17 11 chr4 5849592 5850030 -196478317 + MER50 LTR ERV1 1 446 -288 2498 92 53 8 chr4 5850030 5850389 -196477958 + THE1C LTR MaLR 1 375 0 4154 175 17 11 chr4 5850389 5850657 -196477690 + MER50 LTR ERV1 446 711 -23 44615 40 2 2 chr4 5850748 5856635 -196471712 + L1PA3 LINE L1 1 5887 -268 730 271 128 18 chr4 5856878 5857159 -196471188 - L2 LINE L2 -3 3310 2999 309 336 0 9 chr4 5857343 5857453 -196470894 + MIR SINE MIR 45 153 -55 420 257 83 0 chr4 5857462 5857571 -196470776 - L2 LINE L2 -3 3269 3152 962 201 67 48 chr4 5857574 5857843 -196470504 + MLT1A2 LTR MaLR 2 275 -99 1689 164 0 11 chr4 5857857 5858144 -196470203 + AluJb SINE Alu 5 288 -24 675 275 29 24 chr4 5858244 5858451 -196469896 + MIR SINE MIR 21 228 -34 202 308 169 6 chr4 5860588 5860760 -196467587 + L2 LINE L2 2854 3053 -219 189 107 0 0 chr4 5860867 5860895 -196467452 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 181 219 0 0 chr4 5860896 5860928 -196467419 - L2 LINE L2 -12 3260 3229 430 238 54 48 chr4 5861001 5861148 -196467199 + MIR SINE MIR 8 155 -107 236 226 30 52 chr4 5861298 5861419 -196466928 + MLT1J LTR MaLR 4 157 -331 6756 41 0 1 chr4 5861608 5862410 -196465937 + L1PA4 LINE L1 5352 6152 -3 7221 184 169 16 chr4 5862469 5863985 -196464362 + MER52A LTR ERV1 1 1749 -6 505 224 131 90 chr4 5864002 5864247 -196464100 + MLT1J LTR MaLR 257 511 0 464 219 31 25 chr4 5864440 5864600 -196463747 - L1ME4a LINE L1 -2 6119 5959 314 123 18 0 chr4 5864621 5864678 -196463669 + CT-rich Low_complexity Low_complexity 1 58 0 369 294 69 50 chr4 5864886 5865136 -196463211 - MIR SINE MIR -5 257 2 333 314 147 5 chr4 5865156 5865347 -196463000 - MIR SINE MIR -13 249 32 1987 123 99 15 chr4 5865463 5865797 -196462550 + THE1B LTR MaLR 3 364 0 12449 79 6 0 chr4 5865797 5867363 -196460984 + THE1B-int LTR MaLR 1 1575 -5 2342 99 51 26 chr4 5867369 5867721 -196460626 + THE1B LTR MaLR 4 364 0 665 287 54 41 chr4 5867723 5868092 -196460255 - HAL1 LINE L1 -100 2407 2034 392 219 31 0 chr4 5868089 5868185 -196460162 + L1MC5 LINE L1 7690 7788 -173 * 613 297 81 28 chr4 5868328 5868648 -196459699 + L1MEc LINE L1 208 544 -5852 2615 117 33 14 chr4 5868694 5869113 -196459234 - MSTA LTR MaLR -1 427 1 690 199 97 58 chr4 5869181 5869407 -196458940 + L1MB8 LINE L1 5944 6178 0 732 288 30 9 chr4 5869408 5869745 -196458602 + L1MEc LINE L1 673 1016 -5380 1476 272 67 54 chr4 5869774 5870388 -196457959 + L1MCb LINE L1 3 624 -5421 478 171 29 19 chr4 5870415 5870520 -196457827 - L1MC5 LINE L1 -173 7788 7683 * 577 262 65 44 chr4 5870508 5870686 -196457661 + HAL1 LINE L1 2034 2220 -287 234 0 0 0 chr4 5870686 5870712 -196457635 + (TG)n Simple_repeat Simple_repeat 2 27 0 577 262 65 44 chr4 5870712 5870781 -196457566 + HAL1 LINE L1 2220 2286 -221 6195 246 49 15 chr4 5870827 5871569 -196456778 + L1MCb LINE L1 2442 3157 -3407 2120 116 0 7 chr4 5871569 5871879 -196456468 + AluSg SINE Alu 1 308 -2 6195 246 49 15 chr4 5871879 5873311 -196455036 + L1MCb LINE L1 3157 4647 -1917 580 324 5 0 chr4 5873415 5873600 -196454747 - MIR SINE MIR -38 224 39 2167 103 7 0 chr4 5873864 5874166 -196454181 - AluSq SINE Alu -9 304 1 196 296 122 61 chr4 5874350 5874644 -196453703 - L2 LINE L2 -46 3226 2915 331 311 49 44 chr4 5874662 5874845 -196453502 - L2 LINE L2 -508 2806 2623 2436 162 76 8 chr4 5874977 5875464 -196452883 + L1MB5 LINE L1 5592 6111 -63 316 268 173 36 chr4 5876090 5876258 -196452089 + L1ME4a LINE L1 5853 6043 -78 206 341 22 52 chr4 5876419 5876554 -196451793 - MIR3 SINE MIR -40 168 38 339 175 16 16 chr4 5876748 5876811 -196451536 + MIR3 SINE MIR 133 195 -13 188 341 141 22 chr4 5877145 5877280 -196451067 - L2 LINE L2 -598 2716 2566 306 269 121 0 chr4 5877789 5877930 -196450417 - L1M4 LINE L1 -1301 4845 4688 2155 107 3 0 chr4 5878024 5878323 -196450024 + AluSq SINE Alu 3 302 -11 898 251 31 4 chr4 5879463 5879690 -196448657 - MIR SINE MIR -1 261 29 260 314 101 0 chr4 5879762 5879921 -196448426 + MER91A DNA MER1_type 22 196 0 407 215 13 0 chr4 5880306 5880385 -196447962 + MIR SINE MIR 2 81 -181 2795 187 19 0 chr4 5880387 5880873 -196447474 + MER68 LTR ERV1 3 497 -65 * 4067 117 23 143 chr4 5880868 5881128 -196447219 - Tigger3b DNA MER2_type -1797 1232 943 2034 108 17 0 chr4 5881128 5881415 -196446932 + AluSx SINE Alu 21 312 0 4067 117 23 143 chr4 5881415 5881596 -196446751 - Tigger3b DNA MER2_type -2086 943 742 1857 150 3 10 chr4 5881596 5881896 -196446451 - AluSx SINE Alu -14 298 1 4067 117 23 143 chr4 5881896 5881975 -196446372 - Tigger3b DNA MER2_type -2287 742 655 204 40 0 0 chr4 5881975 5882000 -196446347 + (TTTTA)n Simple_repeat Simple_repeat 1 25 0 4067 117 23 143 chr4 5882000 5882884 -196445463 - Tigger3b DNA MER2_type -2374 655 1 392 116 29 14 chr4 5882884 5882953 -196445394 + MER68 LTR ERV1 491 560 -2 562 276 61 33 chr4 5882955 5883136 -196445211 + MIR SINE MIR 77 262 0 784 243 70 27 chr4 5884251 5884507 -196443840 + MIR SINE MIR 3 259 -3 200 244 0 23 chr4 5884518 5884566 -196443781 + (TAG)n Simple_repeat Simple_repeat 3 50 -36 2210 109 3 0 chr4 5884566 5884877 -196443470 + AluSq SINE Alu 1 312 -1 200 244 0 23 chr4 5884877 5884914 -196443433 + (TAG)n Simple_repeat Simple_repeat 50 86 0 2283 96 0 0 chr4 5884934 5885236 -196443111 + AluSq SINE Alu 1 302 -11 556 244 8 8 chr4 5885831 5885954 -196442393 - L2 LINE L2 -8 3305 3183 216 0 0 0 chr4 5886652 5886676 -196441671 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 186 254 34 17 chr4 5886767 5886826 -196441521 + MIR SINE MIR 81 140 -68 1673 182 65 11 chr4 5887033 5887401 -196440946 + MLT1B LTR MaLR 1 388 -2 293 302 59 27 chr4 5887403 5887605 -196440742 - MIR SINE MIR 0 262 12 33 25 0 0 chr4 5888597 5888637 -196439710 + AT_rich Low_complexity Low_complexity 1 40 0 516 323 114 24 chr4 5889054 5889388 -196438959 - L3 LINE CR1 -17 1560 1197 367 322 128 0 chr4 5889400 5889627 -196438720 - L2 LINE L2 -509 2805 2550 524 189 28 9 chr4 5889838 5889944 -196438403 - MLT1C LTR MaLR -7 460 353 262 273 55 55 chr4 5890146 5890256 -196438091 - MER5A DNA MER1_type 0 189 80 1862 186 83 34 chr4 5890259 5890704 -196437643 - MLT1C LTR MaLR 0 467 1 344 403 14 0 chr4 5890728 5890867 -196437480 + L3 LINE CR1 1436 1576 -1 272 91 23 0 chr4 5890978 5891022 -196437325 + L1MC3 LINE L1 7550 7594 -191 926 155 83 6 chr4 5891023 5891204 -196437143 + L1MC2 LINE L1 6138 6332 -12 2318 72 0 0 chr4 5891332 5891624 -196436723 + AluSx SINE Alu 1 292 -20 354 98 0 0 chr4 5893156 5893207 -196435140 + (GGGA)n Simple_repeat Simple_repeat 4 54 0 188 283 0 0 chr4 5893340 5893386 -196434961 - L2 LINE L2 -8 3264 3219 194 283 0 0 chr4 5893562 5893608 -196434739 + MIR SINE MIR 30 75 -133 180 263 30 50 chr4 5893682 5893781 -196434566 + L2 LINE L2 920 1016 -2298 1523 221 85 32 chr4 5893803 5894264 -196434083 + MLT1D LTR MaLR 21 505 0 223 213 147 13 chr4 5894377 5894452 -196433895 - MIR SINE MIR -173 89 5 310 302 223 0 chr4 5894537 5894802 -196433545 + L2 LINE L2 1228 1551 -1763 379 274 18 97 chr4 5895015 5895241 -196433106 - L2 LINE L2 -28 3285 3078 189 345 0 0 chr4 5895581 5895639 -196432708 + L2 LINE L2 3215 3272 0 198 333 109 14 chr4 5895710 5895848 -196432499 + MIR SINE MIR 88 238 -24 291 270 92 50 chr4 5896121 5896261 -196432086 + MIR3 SINE MIR 71 237 -25 185 259 0 69 chr4 5896839 5896897 -196431450 + L2 LINE L2 3249 3302 -11 197 235 12 99 chr4 5898151 5898232 -196430115 - MIR SINE MIR -116 146 73 * 254 343 20 0 chr4 5898231 5898330 -196430017 + MIR SINE MIR 52 152 -110 893 243 53 0 chr4 5899159 5899365 -196428982 + MIR SINE MIR 13 229 -33 234 303 66 53 chr4 5899452 5899680 -196428667 + L2 LINE L2 2806 3036 -236 803 111 0 22 chr4 5899681 5899816 -196428531 + L1PA13 LINE L1 6031 6162 -1 287 29 29 105 chr4 5899869 5899974 -196428373 + (TATAA)n Simple_repeat Simple_repeat 3 99 0 324 114 53 35 chr4 5899977 5900144 -196428203 + (TTATA)n Simple_repeat Simple_repeat 1 169 0 368 270 48 100 chr4 5900144 5900374 -196427973 + L2 LINE L2 3015 3232 -40 228 275 46 69 chr4 5900775 5900906 -196427441 + MIR SINE MIR 85 212 -50 2264 102 0 0 chr4 5901043 5901347 -196427000 + AluSx SINE Alu 5 308 -4 230 182 36 18 chr4 5901348 5901403 -196426944 - MIR3 SINE MIR -13 195 140 526 295 87 12 chr4 5901460 5901633 -196426714 - MIR SINE MIR -4 258 73 432 192 79 68 chr4 5902114 5902291 -196426056 + LTR16C LTR ERVL 298 476 -15 214 230 92 7 chr4 5902291 5902443 -196425904 + (GTGTG)n Simple_repeat Simple_repeat 3 167 0 292 319 104 25 chr4 5902515 5902565 -196425782 + MER5B DNA MER1_type 1 46 -132 870 238 6 0 chr4 5902565 5902737 -196425610 + FAM SINE Alu 2 174 -1 292 319 104 25 chr4 5902737 5902849 -196425498 + MER5B DNA MER1_type 46 176 -2 253 314 41 0 chr4 5903121 5903242 -196425105 + MIR3 SINE MIR 7 132 -76 234 188 0 0 chr4 5903607 5903655 -196424692 - HAL1b LINE L1 -556 792 745 460 317 108 34 chr4 5904001 5904474 -196423873 - HAL1 LINE L1 -590 1917 1410 486 286 181 26 chr4 5904486 5904752 -196423595 + L1ME4a LINE L1 5813 6119 -2 210 158 0 0 chr4 5904754 5904792 -196423555 + (TTA)n Simple_repeat Simple_repeat 3 40 0 295 235 81 59 chr4 5904835 5904971 -196423376 + LTR16A LTR ERVL 282 420 -30 * 2732 176 35 6 chr4 5904951 5905434 -196422913 - MER68 LTR ERV1 -65 497 1 1739 201 50 42 chr4 5906221 5906679 -196421668 + MLT1C LTR MaLR 6 467 0 281 355 83 0 chr4 5906681 5906802 -196421545 - MIR SINE MIR -54 208 78 2242 219 38 20 chr4 5907706 5908319 -196420028 + L1M4 LINE L1 4243 4866 -1280 * 5862 157 34 81 chr4 5908318 5908944 -196419403 + L1MC3 LINE L1 5914 6443 -1342 1543 192 27 3 chr4 5908944 5909068 -196419279 + AluJb SINE Alu 1 121 -191 216 0 0 0 chr4 5909068 5909092 -196419255 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 1543 192 27 3 chr4 5909092 5909264 -196419083 + AluJb SINE Alu 121 304 -8 5862 157 34 81 chr4 5909264 5909979 -196418368 + L1MC3 LINE L1 6443 7191 -594 1998 131 38 35 chr4 5910321 5910687 -196417660 - THE1C LTR MaLR -8 367 1 23 0 0 0 chr4 5910707 5910730 -196417617 + AT_rich Low_complexity Low_complexity 1 23 0 395 296 127 21 chr4 5910787 5910929 -196417418 - MIR SINE MIR -74 188 32 267 265 61 41 chr4 5911282 5911380 -196416967 - MIR SINE MIR -162 100 1 332 346 31 25 chr4 5911687 5911846 -196416501 + MIR SINE MIR 37 196 -66 391 288 11 34 chr4 5912168 5912301 -196416046 + MIR SINE MIR 16 150 -58 567 234 37 92 chr4 5913328 5913383 -196414964 - MER63A DNA MER1_type -1478 210 154 1903 131 17 3 chr4 5913383 5913673 -196414674 - AluSc SINE Alu -15 294 1 567 234 37 92 chr4 5913673 5913835 -196414512 - MER63A DNA MER1_type -1534 154 5 330 206 0 29 chr4 5914294 5914362 -196413985 - L3 LINE CR1 -533 1044 979 197 303 10 61 chr4 5914491 5914590 -196413757 - L2 LINE L2 -853 2461 2368 200 368 88 7 chr4 5914629 5914765 -196413582 - L3 LINE CR1 -1026 551 405 2141 71 0 7 chr4 5915444 5915726 -196412621 + AluSx SINE Alu 23 302 -10 294 333 71 0 chr4 5916014 5916140 -196412207 + L2 LINE L2 3138 3272 0 26 0 0 0 chr4 5916988 5917014 -196411333 + AT_rich Low_complexity Low_complexity 1 26 0 308 263 10 10 chr4 5918049 5918148 -196410199 + (CA)n Simple_repeat Simple_repeat 1 99 0 1184 247 241 10 chr4 5919036 5919522 -196408825 + L1MD2 LINE L1 5730 6327 -32 305 198 64 10 chr4 5919528 5919602 -196408745 + AluJ/FLAM SINE Alu 1 60 -242 249 301 139 8 chr4 5919602 5919861 -196408486 - L2 LINE L2 -1163 2151 1859 372 351 119 21 chr4 5919896 5920283 -196408064 + L2 LINE L2 2843 3267 -5 4532 80 17 19 chr4 5920549 5921067 -196407280 + L1PB2 LINE L1 5513 6031 -120 2354 75 0 7 chr4 5921067 5921372 -196406975 + AluSx SINE Alu 1 303 -9 4532 80 17 19 chr4 5921372 5921493 -196406854 + L1PB2 LINE L1 6031 6151 0 1711 211 29 27 chr4 5921743 5922156 -196406191 + MLT2D LTR ERVL 1 414 0 1263 185 22 128 chr4 5922321 5922727 -196405620 + MLT1A1 LTR MaLR 1 363 -2 323 295 62 18 chr4 5923012 5923124 -196405223 + MIR SINE MIR 107 223 -39 1596 196 164 56 chr4 5923208 5923758 -196404589 + MLT1E2 LTR MaLR 18 626 0 269 186 57 43 chr4 5925539 5925609 -196402738 - L1ME4a LINE L1 -78 6043 5973 756 194 114 0 chr4 5925870 5926045 -196402302 + L1MD3 LINE L1 7793 7987 -8 317 292 62 80 chr4 5926659 5926984 -196401363 + L2 LINE L2 2915 3233 -39 735 335 13 4 chr4 5927082 5927309 -196401038 - MIR SINE MIR -33 229 1 194 318 39 70 chr4 5928174 5928303 -196400044 + L2 LINE L2 3111 3235 -37 478 282 35 53 chr4 5928363 5928590 -196399757 - MIR SINE MIR -12 250 28 203 256 0 0 chr4 5928607 5928650 -196399697 + L2 LINE L2 3271 3313 0 209 315 13 0 chr4 5928668 5928755 -196399592 + GA-rich Low_complexity Low_complexity 1 88 0 368 292 128 65 chr4 5928765 5929118 -196399229 - L2 LINE L2 -63 3209 2835 421 268 190 0 chr4 5929249 5929391 -196398956 + MIR SINE MIR 20 188 -74 1869 137 23 0 chr4 5929594 5929893 -196398454 + AluSx SINE Alu 1 306 -6 259 314 69 0 chr4 5930579 5930681 -196397666 + MIR3 SINE MIR 11 119 -89 2883 128 16 5 chr4 5930830 5931253 -196397094 + MSTA LTR MaLR 1 428 0 7881 181 47 7 chr4 5931255 5932760 -196395587 + MSTA-int LTR MaLR 3 1567 -13 2584 111 47 8 chr4 5932761 5933147 -196395200 + MSTA LTR MaLR 28 428 0 1165 305 55 19 chr4 5933155 5933896 -196394451 - L1M4 LINE L1 -2231 3915 3148 806 104 0 17 chr4 5933919 5934034 -196394313 - AluSg/x SINE Alu -17 295 183 24 32 0 0 chr4 5934309 5934340 -196394007 + AT_rich Low_complexity Low_complexity 1 31 0 496 245 193 30 chr4 5934632 5934865 -196393482 - L2 LINE L2 -940 2374 2104 1322 190 43 4 chr4 5934944 5935090 -196393257 - AluJo SINE Alu -30 282 120 207 0 0 0 chr4 5935090 5935113 -196393234 + (TA)n Simple_repeat Simple_repeat 1 23 0 1322 190 43 4 chr4 5935113 5935224 -196393123 - AluJo SINE Alu -192 120 15 2181 207 21 31 chr4 5935576 5936098 -196392249 - Charlie1b DNA MER1_type -6 517 1 261 283 11 33 chr4 5936119 5936211 -196392136 - L2 LINE L2 -62 3210 3121 269 327 44 9 chr4 5936265 5936378 -196391969 + L2 LINE L2 2904 3020 -252 197 284 0 15 chr4 5936475 5936523 -196391824 + L2 LINE L2 3207 3254 -18 1218 67 0 0 chr4 5936523 5936701 -196391646 + (TAGA)n Simple_repeat Simple_repeat 1 178 0 291 28 0 0 chr4 5936701 5936737 -196391610 + (CATA)n Simple_repeat Simple_repeat 1 36 0 197 284 0 15 chr4 5936737 5936754 -196391593 + L2 LINE L2 3252 3272 0 203 256 49 12 chr4 5936856 5936938 -196391409 - MIR SINE MIR -65 143 59 193 261 101 43 chr4 5937385 5937454 -196390893 + MIR SINE MIR 109 181 -81 329 281 99 18 chr4 5938140 5938329 -196390018 - MIR SINE MIR -33 229 29 826 168 8 0 chr4 5939986 5940117 -196388230 - FLAM_C SINE Alu -10 133 2 214 242 0 97 chr4 5940328 5940390 -196387957 + MIR3 SINE MIR 99 154 -54 202 229 202 9 chr4 5941172 5941281 -196387066 + MIR SINE MIR 119 248 -14 21 36 0 0 chr4 5941521 5941549 -196386798 + GC_rich Low_complexity Low_complexity 1 28 0 555 228 179 0 chr4 5942442 5942587 -196385760 - MIR SINE MIR -8 254 84 376 310 76 18 chr4 5943138 5943309 -196385038 - MIR SINE MIR -75 187 7 210 330 44 0 chr4 5943314 5943405 -196384942 - MIR SINE MIR -96 166 72 202 260 231 0 chr4 5943393 5943497 -196384850 - L2 LINE L2 -697 2617 2490 * 325 278 125 65 chr4 5943562 5943645 -196384702 + L2 LINE L2 2698 2775 -497 2240 92 3 0 chr4 5943645 5943949 -196384398 + AluSx SINE Alu 1 305 -7 1551 118 4 0 chr4 5943949 5944175 -196384172 + AluSp SINE Alu 76 304 -9 325 278 125 65 chr4 5944175 5944499 -196383848 + L2 LINE L2 2774 3123 -149 1385 239 75 66 chr4 5944572 5945041 -196383306 - HAL1 LINE L1 0 2507 2029 1748 179 0 22 chr4 5945041 5945360 -196382987 - AluJb SINE Alu 0 312 1 1385 239 75 66 chr4 5945360 5945544 -196382803 - HAL1 LINE L1 -478 2029 1848 872 193 34 6 chr4 5945545 5945721 -196382626 + MER5A DNA MER1_type 6 186 -3 2168 229 117 41 chr4 5945727 5945988 -196382359 - HAL1 LINE L1 -696 1811 1571 2333 90 0 0 chr4 5945988 5946289 -196382058 - AluSg SINE Alu -9 301 1 2168 229 117 41 chr4 5946289 5946305 -196382042 - HAL1 LINE L1 -936 1571 1558 4150 159 44 24 chr4 5946305 5947072 -196381275 - LTR39 LTR ERV1 0 783 1 2168 229 117 41 chr4 5947072 5947692 -196380655 - HAL1 LINE L1 -949 1558 845 974 288 142 12 chr4 5947838 5948262 -196380085 + L2 LINE L2 2829 3307 -6 3280 224 11 3 chr4 5948370 5949017 -196379330 + MER82 DNA MER2_type 2 653 0 1275 259 63 46 chr4 5949743 5950268 -196378079 - L1ME2 LINE L1 -11 6153 5620 362 322 22 44 chr4 5950521 5950701 -196377646 - MIR SINE MIR -57 205 30 2124 177 46 37 chr4 5951425 5951832 -196376515 + L1MB8 LINE L1 5655 6070 -108 2243 125 3 0 chr4 5951832 5952129 -196376218 + AluSx SINE Alu 1 298 -14 2124 177 46 37 chr4 5952129 5952240 -196376107 + L1MB8 LINE L1 6070 6178 0 521 268 92 44 chr4 5952269 5952497 -196375850 + MIR SINE MIR 14 252 -10 2332 105 0 3 chr4 5953430 5953735 -196374612 - AluSg SINE Alu -6 304 1 594 206 58 13 chr4 5953941 5954096 -196374251 + MER45A DNA AcHobo 1 162 -16 200 171 143 71 chr4 5954263 5954333 -196374014 + L3b LINE CR1 1489 1563 -20 * 257 269 25 84 chr4 5954312 5954431 -196373916 + MIR SINE MIR 104 215 -47 533 284 20 0 chr4 5954737 5954885 -196373462 + MIR SINE MIR 2 152 -110 6619 72 25 0 chr4 5954973 5956153 -196372194 - L1PA10 LINE L1 0 6168 4960 10417 28 0 0 chr4 5956819 5958818 -196369529 - L1PA2 LINE L1 0 6155 4157 203 260 0 20 chr4 5958893 5958943 -196369404 - MIR SINE MIR -68 140 92 669 235 0 0 chr4 5959212 5959391 -196368956 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 512 277 84 25 chr4 5959983 5960185 -196368162 - MIR SINE MIR -12 250 37 584 330 85 0 chr4 5960291 5960515 -196367832 + MIR SINE MIR 12 254 -8 356 225 22 0 chr4 5960553 5960642 -196367705 - MER103 DNA DNA -73 93 3 180 350 41 0 chr4 5960990 5961087 -196367260 - L2 LINE L2 -304 2968 2868 311 213 13 0 chr4 5961969 5962044 -196366303 - MIR SINE MIR -64 144 69 188 286 18 0 chr4 5962187 5962243 -196366104 - MIR SINE MIR -13 249 193 532 196 65 36 chr4 5962334 5962472 -196365875 - MIR SINE MIR -86 176 35 223 182 45 0 chr4 5962875 5962919 -196365428 + MIR SINE MIR 108 153 -109 1859 169 7 3 chr4 5962977 5963278 -196365069 + AluJb SINE Alu 1 302 -10 470 233 169 29 chr4 5964041 5964213 -196364134 - MIR SINE MIR -14 248 53 1730 189 14 0 chr4 5964607 5964734 -196363613 + AluJo SINE Alu 1 125 -187 189 0 0 0 chr4 5964734 5964755 -196363592 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 1730 189 14 0 chr4 5964755 5964924 -196363423 + AluJo SINE Alu 125 301 -11 181 266 266 64 chr4 5965343 5965452 -196362895 - L2 LINE L2 -40 3232 3102 387 253 32 11 chr4 5965582 5965677 -196362670 + MIR SINE MIR 24 120 -88 473 190 15 0 chr4 5965893 5965990 -196362357 - MIR SINE MIR -65 143 45 583 268 122 58 chr4 5966388 5966530 -196361817 + L1MD2 LINE L1 5989 6121 -238 255 61 0 0 chr4 5966530 5966563 -196361784 + (CA)n Simple_repeat Simple_repeat 2 34 0 583 268 122 58 chr4 5966563 5966704 -196361643 + L1MD2 LINE L1 6121 6298 -61 15408 120 24 29 chr4 5966704 5968879 -196359468 + Tigger1 DNA MER2_type 3 2166 -252 1766 110 0 4 chr4 5968879 5969115 -196359232 - AluSc SINE Alu -74 235 1 15408 120 24 29 chr4 5969115 5969367 -196358980 + Tigger1 DNA MER2_type 2166 2418 0 583 268 122 58 chr4 5969367 5969411 -196358936 + L1MD2 LINE L1 6298 6338 -21 391 269 52 72 chr4 5969616 5969809 -196358538 + MIR SINE MIR 40 228 -34 605 187 13 47 chr4 5969863 5970013 -196358334 + MER58B DNA MER1_type 197 341 0 834 168 0 0 chr4 5970033 5970164 -196358183 + FLAM_C SINE Alu 1 131 -2 2666 200 26 17 chr4 5970216 5970437 -196357910 + L1MC/D LINE L1 4839 5057 -1302 2453 106 0 3 chr4 5970437 5970749 -196357598 + AluSx SINE Alu 2 312 0 2666 200 26 17 chr4 5970749 5971473 -196356874 + L1MC/D LINE L1 5057 5788 -571 238 170 85 0 chr4 5971675 5971722 -196356625 + L2 LINE L2 3263 3313 0 259 288 7 7 chr4 5971830 5971915 -196356432 + GA-rich Low_complexity Low_complexity 1 85 0 223 254 16 16 chr4 5972443 5972506 -196355841 + MIR SINE MIR 20 82 -180 180 228 0 0 chr4 5972636 5972693 -196355654 + (CAT)n Simple_repeat Simple_repeat 3 59 0 318 330 9 0 chr4 5972705 5972814 -196355533 + (CAT)n Simple_repeat Simple_repeat 2 111 0 404 264 6 0 chr4 5972827 5973001 -196355346 + (CAT)n Simple_repeat Simple_repeat 1 175 0 1273 201 95 77 chr4 5973024 5973497 -196354850 - MER66A LTR ERV1 0 478 97 344 277 5 0 chr4 5973566 5973778 -196354569 + (CAT)n Simple_repeat Simple_repeat 1 213 0 426 311 37 0 chr4 5973996 5974131 -196354216 - MIR SINE MIR -37 225 86 200 259 19 0 chr4 5974133 5974187 -196354160 + (TAA)n Simple_repeat Simple_repeat 2 56 0 219 292 0 45 chr4 5974198 5974287 -196354060 + MIR SINE MIR 16 100 -108 358 328 56 0 chr4 5974429 5974554 -196353793 + MIR SINE MIR 57 188 -74 313 282 76 112 chr4 5976018 5976401 -196351946 - L2 LINE L2 -2 3270 2902 1089 140 0 0 chr4 5978705 5979063 -196349284 + (TCCA)n Simple_repeat Simple_repeat 1 358 0 616 211 21 84 chr4 5979107 5979297 -196349050 - MER5B DNA MER1_type 0 178 1 404 324 21 14 chr4 5979338 5979483 -196348864 - MER5B DNA MER1_type -32 146 1 1224 85 5 70 chr4 5979486 5979685 -196348662 + MER30B DNA MER1_type 1 186 -4 394 311 13 12 chr4 5979687 5979815 -196348532 + MIR SINE MIR 34 156 -64 317 222 37 0 chr4 5980125 5980206 -196348141 + MER5A DNA MER1_type 4 87 -102 211 286 0 0 chr4 5980674 5980723 -196347624 - L2 LINE L2 -6 3307 3259 908 291 23 16 chr4 5980729 5980987 -196347360 + MIR SINE MIR 1 260 -2 287 366 10 0 chr4 5981351 5981452 -196346895 - MIR SINE MIR -3 259 158 227 372 27 16 chr4 5984297 5984480 -196343867 + MIR SINE MIR 70 254 -8 703 228 54 11 chr4 5984880 5985064 -196343283 + MIR SINE MIR 1 192 -70 210 347 10 0 chr4 5985615 5985713 -196342634 + (TGAA)n Simple_repeat Simple_repeat 1 99 0 446 257 35 20 chr4 5987248 5987400 -196340947 + MIR SINE MIR 32 185 -62 1463 190 15 90 chr4 5987689 5988079 -196340268 - MLT1B LTR MaLR -2 388 28 446 147 186 39 chr4 5988046 5988175 -196340172 - MLT1B LTR MaLR -242 148 1 * 1251 220 66 42 chr4 5988177 5988602 -196339745 + MLT1C LTR MaLR 17 463 -4 237 364 30 0 chr4 5988625 5988724 -196339623 - MIR SINE MIR -35 227 126 255 276 35 11 chr4 5988841 5988928 -196339419 + MIR SINE MIR 31 119 -89 219 350 0 40 chr4 5988936 5989036 -196339311 - MIR SINE MIR -159 103 8 3279 150 53 26 chr4 5989042 5989628 -196338719 - LTR43 LTR ERV1 0 602 1 307 214 29 14 chr4 5989642 5989712 -196338635 + MIR SINE MIR 8 78 -184 188 219 0 0 chr4 5989831 5989863 -196338484 - MER5A DNA MER1_type -1 188 157 235 265 92 0 chr4 5989874 5989947 -196338400 - MIR SINE MIR -76 132 51 1586 132 156 93 chr4 5989989 5990367 -196337980 - MER4A LTR ERV1 0 664 263 485 104 42 21 chr4 5990369 5990465 -196337882 - MER4A LTR ERV1 -566 98 1 2359 98 3 0 chr4 5990793 5991100 -196337247 - AluSq SINE Alu -5 308 1 281 312 127 26 chr4 5991298 5991487 -196336860 + MIR SINE MIR 43 250 -12 1862 189 78 71 chr4 5991588 5992154 -196336193 - LTR59 LTR ERV1 -11 586 17 518 198 35 9 chr4 5992164 5992280 -196336067 - L1PA3 LINE L1 -10 6145 6027 376 283 147 22 chr4 5992578 5992762 -196335585 + L1MC4 LINE L1 7525 7731 -311 1854 119 101 0 chr4 5992795 5993072 -196335275 - AluSx SINE Alu -7 305 1 2096 191 87 17 chr4 5993117 5993599 -196334748 - MER34 LTR ERV1 -15 527 12 241 258 155 7 chr4 5993724 5993879 -196334468 + L1MC5 LINE L1 7703 7880 -81 608 299 83 24 chr4 5994020 5994431 -196333916 + L1ME4a LINE L1 5563 5997 -124 3528 73 54 0 chr4 5994459 5994937 -196333410 + L1PA8 LINE L1 5668 6171 -1 344 246 35 18 chr4 5995076 5995190 -196333157 - L1ME1 LINE L1 -5 6161 6046 1248 180 3 52 chr4 5995215 5995504 -196332843 - L1MC3 LINE L1 -2 7783 7509 191 224 24 118 chr4 5995916 5996001 -196332346 + L2 LINE L2 2697 2773 -541 596 219 12 21 chr4 5996289 5996709 -196331638 + (TCCA)n Simple_repeat Simple_repeat 1 416 0 345 378 31 0 chr4 5996711 5996838 -196331509 - L2 LINE L2 -4 3268 3138 969 223 175 41 chr4 5997709 5998103 -196330244 - MLT1C LTR MaLR 0 467 21 2339 113 0 0 chr4 5998302 5998604 -196329743 - AluSx SINE Alu -10 302 1 632 220 124 6 chr4 5998668 5998845 -196329502 + MER58C DNA MER1_type 1 198 -17 447 320 51 6 chr4 5999188 5999363 -196328984 - MIR SINE MIR 0 262 80 1407 140 62 135 chr4 5999997 6000368 -196327979 + MER2 DNA MER2_type 1 344 0 471 331 12 17 chr4 6000536 6000708 -196327639 + MIR SINE MIR 92 262 0 208 308 84 35 chr4 6000760 6000903 -196327444 - MIR3 SINE MIR -57 151 2 1978 117 0 0 chr4 6001398 6001681 -196326666 + AluSx SINE Alu 25 307 -5 349 303 80 17 chr4 6001685 6001860 -196326487 + Charlie8 DNA MER1_type 89 274 -2143 212 246 18 18 chr4 6001942 6001999 -196326348 + MIR3 SINE MIR 104 160 -48 227 289 78 39 chr4 6003162 6003290 -196325057 + MIR SINE MIR 13 145 -117 2195 205 152 5 chr4 6003291 6003858 -196324489 - MLT1E1 LTR MaLR -1 653 4 366 252 30 15 chr4 6004332 6004463 -196323884 + (TG)n Simple_repeat Simple_repeat 2 134 0 285 289 35 35 chr4 6004493 6004635 -196323712 + (CATG)n Simple_repeat Simple_repeat 1 142 0 642 326 52 17 chr4 6005077 6005310 -196323037 + MIR SINE MIR 11 251 -11 817 169 84 0 chr4 6005331 6005473 -196322874 + AluJb SINE Alu 137 290 -22 233 263 10 30 chr4 6005473 6005572 -196322775 + (TATG)n Simple_repeat Simple_repeat 4 100 0 490 242 253 10 chr4 6007276 6007474 -196320873 + MIR SINE MIR 17 262 0 1420 182 162 17 chr4 6008184 6008530 -196319817 - MSTD LTR MaLR 0 396 1 2022 150 80 102 chr4 6009598 6010077 -196318270 - MLT2B2 LTR ERVL 0 515 48 2207 87 3 13 chr4 6010077 6010388 -196317959 + AluSg1 SINE Alu 1 308 -1 2022 150 80 102 chr4 6010388 6010435 -196317912 - MLT2B2 LTR ERVL -467 48 1 246 282 71 24 chr4 6010981 6011066 -196317281 - L2 LINE L2 0 3272 3184 348 302 16 16 chr4 6011089 6011218 -196317129 + MER117 DNA MER1_type 27 155 -42 348 278 72 0 chr4 6011260 6011357 -196316990 - MIR SINE MIR -8 254 151 375 23 0 0 chr4 6011362 6011406 -196316941 + (TG)n Simple_repeat Simple_repeat 1 44 0 485 213 148 0 chr4 6012173 6012281 -196316066 + L2 LINE L2 3190 3313 0 279 355 35 18 chr4 6012499 6012668 -196315679 + L2 LINE L2 2898 3069 -203 985 242 7 28 chr4 6012749 6013002 -196315345 - MIR SINE MIR 0 262 12 1838 162 0 0 chr4 6013071 6013380 -196314967 + AluSx SINE Alu 1 309 -3 976 159 0 16 chr4 6013400 6013582 -196314765 + AluSg/x SINE Alu 129 307 -5 1719 236 77 19 chr4 6014200 6014679 -196313668 - LTR53 LTR ERVL -12 507 1 709 83 21 0 chr4 6014849 6014945 -196313402 - AluJo SINE Alu -176 136 39 321 269 0 0 chr4 6015254 6015321 -196313026 + MIR SINE MIR 86 152 -110 2152 181 55 22 chr4 6017063 6017515 -196310832 - MLT1C LTR MaLR 0 467 1 190 361 46 0 chr4 6018288 6018418 -196309929 + L2 LINE L2 2801 2936 -378 240 276 168 22 chr4 6018418 6018603 -196309744 + LTR16A1 LTR ERVL 1 212 -245 826 208 34 5 chr4 6018745 6018952 -196309395 + LTR16A1 LTR ERVL 245 457 0 419 261 125 33 chr4 6018999 6019183 -196309164 + L2 LINE L2 3006 3206 -107 288 204 159 21 chr4 6019346 6019491 -196308856 - MIR SINE MIR -57 205 38 21 36 0 0 chr4 6019679 6019707 -196308640 + AT_rich Low_complexity Low_complexity 1 28 0 540 201 37 0 chr4 6020526 6020645 -196307702 + MER63 DNA MER1_type 679 1653 -35 2126 115 3 6 chr4 6021702 6022015 -196306332 - AluSx SINE Alu 0 312 1 181 167 0 48 chr4 6022163 6022205 -196306142 + L2 LINE L2 3014 3053 -219 370 312 64 57 chr4 6022274 6022572 -196305775 - L2 LINE L2 -1 3312 3013 2507 62 0 0 chr4 6023761 6024070 -196304277 - AluY SINE Alu -2 309 1 207 335 81 25 chr4 6024077 6024238 -196304109 + L2 LINE L2 2549 2718 -596 3730 136 62 0 chr4 6024355 6024953 -196303394 - LTR24C LTR ERV1 0 635 1 198 103 0 0 chr4 6025899 6025928 -196302419 + (A)n Simple_repeat Simple_repeat 1 29 0 286 285 8 39 chr4 6026409 6026539 -196301808 + (TATATG)n Simple_repeat Simple_repeat 1 126 0 406 279 66 0 chr4 6026559 6026681 -196301666 - MIR SINE MIR -48 214 85 376 265 15 45 chr4 6026743 6026875 -196301472 - MIR SINE MIR -74 188 61 185 270 0 81 chr4 6027011 6027085 -196301262 + MIR SINE MIR 115 182 -80 2301 151 27 117 chr4 6027438 6027883 -196300464 - MLT2B2 LTR ERVL -2 513 128 1858 135 10 7 chr4 6027883 6028179 -196300168 + AluSx SINE Alu 6 302 -10 2301 151 27 117 chr4 6028179 6028297 -196300050 - MLT2B2 LTR ERVL -387 128 1 228 245 19 47 chr4 6028733 6028839 -196299508 + CT-rich Low_complexity Low_complexity 4 106 0 661 223 7 7 chr4 6029740 6029879 -196298468 + MIR SINE MIR 35 173 -89 1057 269 56 6 chr4 6029971 6030313 -196298034 - L1MEc LINE L1 -5453 943 585 308 205 103 13 chr4 6030327 6030405 -196297942 - L1M4 LINE L1 -3317 2829 2745 352 95 16 16 chr4 6031139 6031202 -196297145 + (TCTA)n Simple_repeat Simple_repeat 3 65 0 311 133 22 0 chr4 6031202 6031247 -196297100 - Tigger2 DNA MER2_type -14 2704 2659 308 299 35 75 chr4 6031250 6031424 -196296923 + L1MEc LINE L1 266 432 -5964 2266 109 48 24 chr4 6031442 6031817 -196296530 - Tigger2 DNA MER2_type -54 2664 2281 2375 144 31 2 chr4 6031823 6032239 -196296108 - L1MA4A LINE L1 -6 6297 5870 399 183 0 14 chr4 6032249 6032320 -196296027 + MER8 DNA MER2_type 170 239 0 450 316 58 0 chr4 6032361 6032535 -196295812 - L1MC4a LINE L1 -1947 5861 5678 497 275 6 2 chr4 6032561 6032702 -196295645 - MIR SINE MIR -43 165 22 225 316 51 0 chr4 6033395 6033493 -196294854 + L2 LINE L2 2737 2839 -475 737 232 29 77 chr4 6033604 6033953 -196294394 - HAL1 LINE L1 0 2507 2176 1944 156 97 33 chr4 6034103 6034495 -196293852 - LTR59 LTR ERV1 -172 425 9 43506 35 23 1 chr4 6034497 6040510 -196287837 - L1PA3 LINE L1 -10 6145 1 303 28 0 0 chr4 6040575 6040611 -196287736 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 769 282 45 48 chr4 6040633 6040988 -196287359 - L2 LINE L2 -383 2931 2578 221 316 74 0 chr4 6041055 6041150 -196287197 + MIR SINE MIR 150 251 -11 2123 115 3 0 chr4 6041156 6041452 -196286895 + AluSx SINE Alu 1 297 -15 2616 113 6 6 chr4 6041644 6042008 -196286339 - THE1B LTR MaLR 0 364 1 1666 259 58 25 chr4 6042499 6043029 -196285318 - MER77 LTR ERV1 -4 601 54 2020 118 3 7 chr4 6043309 6043613 -196284734 + AluSx SINE Alu 1 303 -9 2626 170 41 12 chr4 6043663 6044152 -196284195 - MLT1D LTR MaLR -1 504 2 203 0 0 36 chr4 6044458 6044486 -196283861 + (TTTTA)n Simple_repeat Simple_repeat 4 30 0 2097 75 18 0 chr4 6044493 6044773 -196283574 - AluY SINE Alu -26 285 1 238 314 17 25 chr4 6044908 6045026 -196283321 + MIR3 SINE MIR 4 120 -88 525 285 90 70 chr4 6045409 6045721 -196282626 + L2 LINE L2 2955 3272 0 498 289 119 50 chr4 6045816 6046175 -196282172 - MLT1H LTR MaLR -16 533 40 221 154 0 26 chr4 6046769 6046808 -196281539 + CT-rich Low_complexity Low_complexity 2 39 0 381 270 108 14 chr4 6046964 6047112 -196281235 - MIR SINE MIR -1 261 100 335 299 92 49 chr4 6047814 6047998 -196280349 - L1ME3A LINE L1 -8 6145 5954 1290 217 72 6 chr4 6048073 6048405 -196279942 - L1ME3A LINE L1 -221 5932 5579 497 212 20 34 chr4 6048421 6048567 -196279780 - L1ME3A LINE L1 -1545 4584 4441 * 641 217 41 52 chr4 6048555 6048916 -196279431 - L1ME3A LINE L1 -2088 4041 2315 237 65 0 0 chr4 6048950 6048981 -196279366 + (TTCA)n Simple_repeat Simple_repeat 2 32 0 243 77 0 231 chr4 6049040 6049118 -196279229 + MIR SINE MIR 79 138 -124 848 279 35 80 chr4 6049118 6049835 -196278512 - L1ME3A LINE L1 -4905 1214 530 12982 24 0 1 chr4 6050416 6052768 -196275579 - L1PA3 LINE L1 -2 6153 3803 350 47 0 4 chr4 6052768 6052825 -196275522 + L1PA3 LINE L1 3753 3808 -2338 405 290 147 39 chr4 6052928 6053159 -196275188 + MIR SINE MIR 5 260 -2 195 268 37 49 chr4 6053133 6053215 -196275132 - L2 LINE L2 -4 3268 3188 * 1888 189 40 5 chr4 6053313 6053693 -196274654 - MER68 LTR ERV1 -4 558 166 1758 166 35 10 chr4 6054131 6054421 -196273926 + AluJb SINE Alu 1 297 -15 2195 126 13 3 chr4 6054642 6054951 -196273396 - AluSx SINE Alu 0 312 1 1115 31 15 0 chr4 6054966 6055096 -196273251 - AluY SINE Alu -6 305 174 279 0 0 0 chr4 6055113 6055144 -196273203 + (A)n Simple_repeat Simple_repeat 1 31 0 269 214 0 11 chr4 6055653 6055742 -196272605 + (TG)n Simple_repeat Simple_repeat 1 88 0 264 279 0 0 chr4 6055800 6055911 -196272436 + (TG)n Simple_repeat Simple_repeat 1 111 0 202 320 13 0 chr4 6055922 6055997 -196272350 + (TG)n Simple_repeat Simple_repeat 1 76 0 255 284 77 27 chr4 6056492 6056675 -196271672 + HAL1 LINE L1 2226 2417 -90 1689 202 152 5 chr4 6056735 6057170 -196271177 + MLT1D LTR MaLR 7 505 0 2276 99 13 7 chr4 6057181 6057483 -196270864 - AluSx SINE Alu -8 304 1 251 320 74 16 chr4 6058212 6058334 -196270013 + L2 LINE L2 3136 3264 -8 255 282 103 43 chr4 6058431 6058548 -196269799 + MER5B DNA MER1_type 54 177 -1 2594 57 3 0 chr4 6059167 6059466 -196268881 + AluY SINE Alu 1 300 -11 1840 192 93 25 chr4 6059796 6060269 -196268078 + MLT1D LTR MaLR 1 505 0 282 279 15 0 chr4 6060316 6060384 -196267963 + MIR SINE MIR 7 75 -187 740 254 121 4 chr4 6060468 6060708 -196267639 + L2 LINE L2 1933 2200 -1114 1149 230 7 35 chr4 6060715 6060998 -196267349 - MLT1E LTR MaLR 0 593 319 946 263 207 0 chr4 6060998 6061390 -196266957 + L2 LINE L2 2235 2707 -607 956 140 92 0 chr4 6061410 6061574 -196266773 - MER30 DNA MER1_type -51 179 1 392 270 162 7 chr4 6061586 6061734 -196266613 + MER104 DNA Tc2 1 171 -9 470 262 92 19 chr4 6061738 6062049 -196266298 + L2 LINE L2 2704 3102 -211 2167 139 0 0 chr4 6062474 6062776 -196265571 + AluSx SINE Alu 1 302 -10 248 242 21 84 chr4 6063159 6063254 -196265093 + MIR SINE MIR 8 96 -166 357 233 69 80 chr4 6063313 6063386 -196264961 + L1MEd LINE L1 859 931 -5188 2186 99 13 20 chr4 6063386 6063688 -196264659 + AluSx SINE Alu 1 300 -12 357 233 69 80 chr4 6063688 6063876 -196264471 + L1MEd LINE L1 931 1117 -5002 756 236 51 25 chr4 6064202 6064439 -196263908 + MER90 LTR ERV1 1 243 -332 277 247 74 0 chr4 6064501 6064582 -196263765 + MER90 LTR ERV1 528 614 0 337 283 91 11 chr4 6064820 6065007 -196263340 + L1MEd LINE L1 2196 2397 -3732 255 280 53 33 chr4 6065022 6065172 -196263175 + L1MEd LINE L1 2452 2604 -3525 630 306 73 48 chr4 6065216 6066116 -196262231 + L1M4 LINE L1 4202 5132 -1014 336 221 52 0 chr4 6066407 6066484 -196261863 + MIR SINE MIR 95 175 -87 502 162 110 7 chr4 6066498 6066634 -196261713 - L1MB7 LINE L1 0 6184 6035 375 253 0 57 chr4 6067048 6067161 -196261186 - L1MC4 LINE L1 -1334 6988 1977 188 210 12 0 chr4 6067163 6067244 -196261103 + (TA)n Simple_repeat Simple_repeat 1 82 0 2196 128 0 13 chr4 6067244 6067548 -196260799 - AluSx SINE Alu -12 300 1 3091 117 42 16 chr4 6067581 6068087 -196260260 - L1PA16 LINE L1 -2 6164 5646 2170 131 3 3 chr4 6068207 6068513 -196259834 + AluSx SINE Alu 1 306 -6 226 269 29 39 chr4 6068552 6068656 -196259691 - L1PBa LINE L1 -3902 2961 2859 531 307 84 14 chr4 6068671 6069182 -196259165 - L1MC4 LINE L1 -4913 1503 1012 1613 195 48 11 chr4 6070188 6070563 -196257784 - MLT1B LTR MaLR -1 389 1 303 299 0 0 chr4 6070747 6070824 -196257523 - MIR SINE MIR -178 84 8 327 268 164 18 chr4 6071021 6071214 -196257133 + MIR SINE MIR 33 250 -12 218 343 20 10 chr4 6071687 6071786 -196256561 + MIR SINE MIR 45 144 -118 261 250 47 0 chr4 6071917 6071981 -196256366 - MIR SINE MIR -109 99 33 2359 109 3 0 chr4 6072897 6073208 -196255139 + AluSx SINE Alu 1 312 0 227 299 0 15 chr4 6074107 6074174 -196254173 - MLT1J LTR MaLR -202 309 244 2200 112 27 3 chr4 6074230 6074526 -196253821 + AluSx SINE Alu 1 303 -9 235 252 216 18 chr4 6074534 6074645 -196253702 - MLT1L LTR MaLR -355 260 128 3467 121 17 6 chr4 6075214 6075735 -196252612 - MER1A DNA MER1_type 0 527 1 196 277 31 0 chr4 6076307 6076372 -196251975 + MIR3 SINE MIR 88 154 -54 342 190 0 0 chr4 6076708 6076766 -196251581 + MER94 DNA DNA 54 111 -23 2262 109 10 0 chr4 6076777 6077071 -196251276 - AluSx SINE Alu -15 297 1 369 286 27 0 chr4 6077972 6078084 -196250263 - LTR16C LTR ERVL -2 489 375 287 281 86 29 chr4 6078122 6078261 -196250086 - MLT1E2 LTR MaLR -37 589 443 308 291 34 56 chr4 6078358 6078537 -196249810 - MER5A DNA MER1_type -5 184 10 4580 137 27 23 chr4 6078725 6078918 -196249429 - L1PB4 LINE L1 0 6156 5965 2397 82 7 7 chr4 6078918 6079212 -196249135 - AluSx SINE Alu -18 294 1 4580 137 27 23 chr4 6079212 6079841 -196248506 - L1PB4 LINE L1 -191 5965 5331 302 284 90 26 chr4 6079919 6080074 -196248273 + L2 LINE L2 3149 3313 0 229 191 0 0 chr4 6080074 6080121 -196248226 + GA-rich Low_complexity Low_complexity 2 48 0 392 143 12 0 chr4 6080946 6081030 -196247317 + CT-rich Low_complexity Low_complexity 2 86 0 358 250 176 0 chr4 6081809 6081957 -196246390 - MIR SINE MIR -13 249 76 180 246 146 18 chr4 6082006 6082116 -196246231 + MIR SINE MIR 23 146 -62 491 279 19 13 chr4 6082487 6082645 -196245702 + MIR3 SINE MIR 44 202 -6 185 206 0 0 chr4 6082683 6082717 -196245630 + MIR SINE MIR 116 149 -113 398 286 8 15 chr4 6082892 6083025 -196245322 + MIR3 SINE MIR 12 143 -65 618 264 56 0 chr4 6085500 6085678 -196242669 - MER20 DNA MER1_type -1 218 31 1893 92 7 33 chr4 6086065 6086336 -196242011 - AluSg SINE Alu -46 264 1 690 258 154 27 chr4 6087805 6088104 -196240243 - MER69 DNA AcHobo -2184 342 6 991 208 59 24 chr4 6088104 6088359 -196239988 - LTR48B LTR ERV1 0 644 381 351 314 33 8 chr4 6088853 6088974 -196239373 - MER5A DNA MER1_type -3 186 63 593 290 67 37 chr4 6089099 6089399 -196238948 + LTR16B LTR ERVL 1 309 -155 411 163 8 39 chr4 6089400 6089529 -196238818 + CT-rich Low_complexity Low_complexity 1 125 0 399 234 47 58 chr4 6089532 6089703 -196238644 + LTR16B LTR ERVL 292 460 -4 1998 111 71 31 chr4 6090818 6091168 -196237179 + THE1B LTR MaLR 1 364 0 2462 134 7 34 chr4 6091287 6091697 -196236650 + MSTC LTR MaLR 30 428 0 604 274 50 5 chr4 6091833 6092034 -196236313 + L1M4 LINE L1 4848 5057 -1089 397 171 9 117 chr4 6092038 6092149 -196236198 + MLT1D LTR MaLR 1 99 -406 658 190 23 81 chr4 6092833 6093007 -196235340 + MIR SINE MIR 8 171 -91 423 226 0 0 chr4 6093073 6093175 -196235172 + (CACCAT)n Simple_repeat Simple_repeat 4 105 0 506 324 67 17 chr4 6094962 6095200 -196233147 - MIR SINE MIR -10 252 3 225 315 0 0 chr4 6095219 6095273 -196233074 + (TG)n Simple_repeat Simple_repeat 1 54 0 2049 160 102 19 chr4 6095510 6095922 -196232425 + MER83 LTR ERV1 3 448 0 392 301 77 32 chr4 6095925 6096081 -196232266 + MIR3 SINE MIR 42 204 -4 2114 151 83 2 chr4 6096288 6096685 -196231662 + MSTB1 LTR MaLR 4 432 0 220 200 0 0 chr4 6097313 6097353 -196230994 + CT-rich Low_complexity Low_complexity 2 41 0 583 275 63 5 chr4 6097378 6097567 -196230780 + MER58C DNA MER1_type 1 200 -15 210 246 105 44 chr4 6097802 6097916 -196230431 + MIR SINE MIR 102 222 -40 338 231 13 13 chr4 6098606 6098762 -196229585 + (CA)n Simple_repeat Simple_repeat 1 156 0 231 259 0 0 chr4 6098893 6098978 -196229369 + (CA)n Simple_repeat Simple_repeat 2 86 0 306 308 45 8 chr4 6099099 6099232 -196229115 - LTR16C LTR ERVL -2 489 352 435 244 6 11 chr4 6100408 6100584 -196227763 + (CA)n Simple_repeat Simple_repeat 1 175 0 343 258 78 18 chr4 6101567 6101734 -196226613 - L1ME4a LINE L1 -240 5881 5705 236 333 53 0 chr4 6101858 6101972 -196226375 - L1ME4a LINE L1 -458 5663 5544 1201 131 0 0 chr4 6102072 6102240 -196226107 + AluSg/x SINE Alu 137 304 -8 351 332 123 25 chr4 6102478 6102713 -196225634 - L1MC4a LINE L1 -1903 5905 5648 385 299 108 46 chr4 6102725 6103050 -196225297 - L1MC4a LINE L1 -2187 5621 5277 449 305 100 59 chr4 6103074 6103618 -196224729 - L1MC4a LINE L1 -893 5253 4673 1796 153 50 10 chr4 6103776 6104076 -196224271 - AluJo SINE Alu 0 312 1 2022 162 45 8 chr4 6104763 6105164 -196223183 + L1MB7 LINE L1 5752 6167 -17 1525 238 65 25 chr4 6105627 6105989 -196222358 + MLT1C LTR MaLR 1 386 -81 2878 13 0 0 chr4 6105989 6106295 -196222052 - AluYa5 SINE Alu -5 306 1 1525 238 65 25 chr4 6106295 6106381 -196221966 + MLT1C LTR MaLR 386 467 0 313 269 92 17 chr4 6106386 6106505 -196221842 + MIR SINE MIR 108 235 -27 2455 57 3 10 chr4 6106592 6106888 -196221459 + AluY SINE Alu 1 294 -17 1910 198 20 15 chr4 6107051 6107445 -196220902 + MSTD LTR MaLR 1 396 0 254 125 21 0 chr4 6108502 6108550 -196219797 + GA-rich Low_complexity Low_complexity 2 50 0 2025 117 25 18 chr4 6110177 6110531 -196217816 + AluSq SINE Alu 1 356 0 627 304 99 24 chr4 6110658 6111384 -196216963 - L2 LINE L2 0 3313 2539 465 257 71 0 chr4 6111403 6111543 -196216804 - L2 LINE L2 -896 2418 2269 269 327 10 0 chr4 6111605 6111706 -196216641 + L2 LINE L2 2947 3048 -224 1024 229 138 14 chr4 6112844 6113193 -196215154 - LTR16C LTR ERVL -2 489 98 784 242 37 0 chr4 6113330 6113520 -196214827 + MER3 DNA MER1_type 1 197 -12 247 214 0 18 chr4 6113576 6113632 -196214715 + MIR SINE MIR 96 150 -112 737 228 85 5 chr4 6113713 6113924 -196214423 + MER33 DNA MER1_type 1 228 -96 274 310 52 0 chr4 6114460 6114576 -196213771 - MER5C DNA MER1_type -202 122 1 2019 132 23 23 chr4 6114728 6114847 -196213500 + AluSx SINE Alu 1 119 -193 2033 72 4 0 chr4 6114847 6115096 -196213251 + AluY SINE Alu 61 310 -1 2019 132 23 23 chr4 6115096 6115286 -196213061 + AluSx SINE Alu 118 310 -2 537 161 0 0 chr4 6115400 6115530 -196212817 + (CA)n Simple_repeat Simple_repeat 1 130 0 298 238 114 0 chr4 6116019 6116124 -196212223 - MIR3 SINE MIR -10 198 82 455 333 18 23 chr4 6116445 6116616 -196211731 + MIR SINE MIR 81 250 -12 28 29 0 0 chr4 6116778 6116813 -196211534 + AT_rich Low_complexity Low_complexity 1 35 0 305 287 29 7 chr4 6117378 6117514 -196210833 + HAL1 LINE L1 102 240 -2267 1003 301 29 26 chr4 6117584 6117969 -196210378 + L1ME3A LINE L1 5564 5949 -221 1272 257 111 36 chr4 6117971 6118523 -196209824 + MLT1E LTR MaLR 1 593 0 2111 137 0 10 chr4 6118829 6119129 -196209218 + AluSx SINE Alu 1 297 -15 272 320 62 0 chr4 6119242 6119370 -196208977 + MLT1E-int LTR MaLR 718 853 -518 1957 116 6 75 chr4 6119412 6119730 -196208617 - AluSx SINE Alu -16 296 1 803 297 81 48 chr4 6119837 6120234 -196208113 + MLT1E-int LTR MaLR 961 1370 -1 450 292 0 8 chr4 6120235 6120355 -196207992 + MLT1E LTR MaLR 3 121 -472 481 299 119 0 chr4 6120526 6120703 -196207644 + MIR SINE MIR 31 228 -34 1328 134 26 148 chr4 6120963 6121307 -196207040 - AluYb8 SINE Alu -5 303 2 235 272 142 40 chr4 6121405 6121439 -196206908 - MIR SINE MIR -28 234 205 1159 184 76 65 chr4 6121439 6121809 -196206538 - MLT1A2 LTR MaLR 0 374 1 235 272 142 40 chr4 6121809 6121965 -196206382 - MIR SINE MIR -57 205 20 247 273 220 8 chr4 6123400 6123532 -196204815 - MIR SINE MIR -34 228 69 269 366 99 12 chr4 6123839 6124000 -196204347 - MER5B DNA MER1_type -1 177 3 975 154 7 0 chr4 6124532 6124837 -196203510 + GA-rich Low_complexity Low_complexity 1 307 0 321 261 126 18 chr4 6125032 6125143 -196203204 + MIR3 SINE MIR 39 161 -47 240 283 0 0 chr4 6125281 6125334 -196203013 + polypyrimidine Low_complexity Low_complexity 3 55 0 381 232 12 0 chr4 6125339 6125421 -196202926 - L2 LINE L2 0 3272 3190 2001 127 32 0 chr4 6125950 6126234 -196202113 + AluSx SINE Alu 5 297 -15 2396 192 24 10 chr4 6126246 6126745 -196201602 + L1MA8 LINE L1 5485 5990 -301 1460 147 65 47 chr4 6127071 6127350 -196200997 - AluJb SINE Alu -18 294 11 874 282 112 15 chr4 6127405 6127922 -196200425 + L1ME4a LINE L1 5313 5891 -230 390 323 117 33 chr4 6128375 6128709 -196199638 - L2 LINE L2 -84 3188 2827 392 235 9 0 chr4 6129181 6129296 -196199051 + (CACCAT)n Simple_repeat Simple_repeat 4 119 0 62 0 0 0 chr4 6130867 6130929 -196197418 + AT_rich Low_complexity Low_complexity 1 62 0 2177 60 4 19 chr4 6130936 6131204 -196197143 + AluY SINE Alu 1 264 -47 422 282 81 0 chr4 6131221 6131345 -196197002 + AluJb SINE Alu 164 297 -5 240 35 0 0 chr4 6133114 6133143 -196195204 + (TG)n Simple_repeat Simple_repeat 1 29 0 694 229 7 76 chr4 6133157 6133432 -196194915 - AluSp SINE Alu -31 282 27 206 288 34 0 chr4 6135038 6135097 -196193250 + MIR SINE MIR 129 189 -73 2453 211 60 11 chr4 6136083 6136180 -196192167 - L1 LINE L1 -2472 3674 3583 2291 107 0 0 chr4 6136180 6136469 -196191878 + AluSg SINE Alu 1 289 -21 2453 211 60 11 chr4 6136469 6137040 -196191307 - L1 LINE L1 -2563 3583 2973 5023 64 11 33 chr4 6137385 6138091 -196190256 + LTR8 LTR ERV1 1 691 0 300 305 17 17 chr4 6138171 6138289 -196190058 - MER5B DNA MER1_type -58 120 3 538 208 12 17 chr4 6139725 6139898 -196188449 + (CCA)n Simple_repeat Simple_repeat 2 173 0 * 669 189 11 11 chr4 6139855 6140035 -196188312 + (CAT)n Simple_repeat Simple_repeat 1 180 0 308 162 0 15 chr4 6140084 6140152 -196188195 + (CAT)n Simple_repeat Simple_repeat 1 67 0 689 295 59 8 chr4 6140152 6140389 -196187958 - MIR SINE MIR -1 261 13 203 410 8 22 chr4 6140410 6140544 -196187803 - L3b LINE CR1 -8 1575 1444 * 540 296 224 31 chr4 6140534 6141646 -196186701 + L2 LINE L2 1729 3053 -219 192 278 37 0 chr4 6141786 6141840 -196186507 + L2 LINE L2 3212 3267 -5 215 293 69 26 chr4 6141937 6142053 -196186294 - MIR SINE MIR -68 140 20 414 293 43 27 chr4 6142113 6142301 -196186046 - MIR SINE MIR -44 218 28 240 200 20 0 chr4 6142797 6142847 -196185500 + MLT1J2 LTR MaLR 92 142 -308 334 198 128 0 chr4 6143131 6143217 -196185130 + MIR SINE MIR 70 166 -96 30 27 0 0 chr4 6143394 6143431 -196184916 + AT_rich Low_complexity Low_complexity 1 37 0 476 282 116 33 chr4 6143908 6144149 -196184198 - L2 LINE L2 -1 3271 3011 1571 156 15 30 chr4 6145439 6145708 -196182639 - AluJo SINE Alu -13 299 35 216 97 0 0 chr4 6145729 6145760 -196182587 + (T)n Simple_repeat Simple_repeat 1 31 0 433 313 65 18 chr4 6145859 6146076 -196182271 - MIR SINE MIR -34 228 2 354 317 36 28 chr4 6147288 6147537 -196180810 - L2 LINE L2 -188 3084 2834 2304 78 3 10 chr4 6147969 6148265 -196180082 + AluSc SINE Alu 1 294 -15 481 299 119 0 chr4 6148525 6148702 -196179645 - MIR SINE MIR -34 228 31 450 292 0 8 chr4 6148873 6148993 -196179354 - MLT1E LTR MaLR -472 121 3 803 297 81 48 chr4 6148994 6149391 -196178956 - MLT1E-int LTR MaLR -1 1370 961 2026 107 6 75 chr4 6149498 6149816 -196178531 + AluSx SINE Alu 1 296 -16 272 320 62 0 chr4 6149858 6149986 -196178361 - MLT1E-int LTR MaLR -518 853 718 241 172 0 52 chr4 6150099 6150157 -196178190 - Alu SINE Alu -5 295 241 693 201 6 11 chr4 6150389 6150568 -196177779 + (CCA)n Simple_repeat Simple_repeat 1 178 0 313 189 0 45 chr4 6150563 6150674 -196177673 + (CACCAT)n Simple_repeat Simple_repeat 1 106 0 * 713 183 11 11 chr4 6150674 6150854 -196177493 + (CCA)n Simple_repeat Simple_repeat 1 180 0 432 218 6 26 chr4 6150858 6151014 -196177333 + (CACCAT)n Simple_repeat Simple_repeat 4 156 0 308 162 0 15 chr4 6151063 6151131 -196177216 + (CAT)n Simple_repeat Simple_repeat 1 67 0 689 295 59 8 chr4 6151131 6151368 -196176979 - MIR SINE MIR -1 261 13 203 410 8 22 chr4 6151389 6151523 -196176824 - L3b LINE CR1 -8 1575 1444 * 540 296 224 31 chr4 6151513 6152625 -196175722 + L2 LINE L2 1729 3053 -219 192 278 37 0 chr4 6152765 6152819 -196175528 + L2 LINE L2 3212 3267 -5 215 293 69 26 chr4 6152916 6153032 -196175315 - MIR SINE MIR -68 140 20 414 293 43 27 chr4 6153092 6153280 -196175067 - MIR SINE MIR -44 218 28 240 200 20 0 chr4 6153776 6153826 -196174521 + MLT1J2 LTR MaLR 92 142 -308 334 198 128 0 chr4 6154110 6154196 -196174151 + MIR SINE MIR 70 166 -96 30 27 0 0 chr4 6154373 6154410 -196173937 + AT_rich Low_complexity Low_complexity 1 37 0 476 282 116 33 chr4 6154887 6155128 -196173219 - L2 LINE L2 -1 3271 3011 1571 156 15 30 chr4 6156418 6156687 -196171660 - AluJo SINE Alu -13 299 35 216 97 0 0 chr4 6156708 6156739 -196171608 + (T)n Simple_repeat Simple_repeat 1 31 0 433 313 65 18 chr4 6156838 6157055 -196171292 - MIR SINE MIR -34 228 2 427 293 36 28 chr4 6158267 6158516 -196169831 - L2 LINE L2 -188 3084 2834 2375 80 3 7 chr4 6158948 6159249 -196169098 + AluSc SINE Alu 1 300 -9 1260 163 38 129 chr4 6159277 6159705 -196168642 + MLT1B LTR MaLR 2 374 0 475 269 54 81 chr4 6160425 6160648 -196167699 - L1MC5 LINE L1 -30 7931 7715 303 140 40 0 chr4 6160679 6160729 -196167618 + MER75 DNA T2_type 453 504 0 303 313 42 50 chr4 6160729 6160988 -196167359 - L1MC5 LINE L1 -253 7708 7452 189 0 0 0 chr4 6161516 6161537 -196166810 + (CA)n Simple_repeat Simple_repeat 2 22 0 432 37 0 0 chr4 6161862 6161916 -196166431 + (TA)n Simple_repeat Simple_repeat 1 54 0 2441 86 0 0 chr4 6161917 6162209 -196166138 - AluY SINE Alu -19 292 1 520 355 4 18 chr4 6162224 6162497 -196165850 - L1ME LINE L1 -301 5820 5552 1922 179 0 3 chr4 6162548 6162856 -196165491 - AluJo SINE Alu 0 312 6 217 214 62 107 chr4 6162930 6163009 -196165338 - L2 LINE L2 -60 3212 3138 2479 77 6 6 chr4 6163009 6163320 -196165027 + AluY SINE Alu 1 311 0 217 214 62 107 chr4 6163320 6163352 -196164995 - L2 LINE L2 -134 3138 3106 310 354 79 0 chr4 6163367 6163531 -196164816 - LTR16C LTR ERVL -26 465 289 213 261 99 49 chr4 6163638 6163780 -196164567 + L2 LINE L2 2701 2849 -465 390 227 0 11 chr4 6164085 6164173 -196164174 + L2 LINE L2 3186 3272 -41 2312 83 0 35 chr4 6164987 6165301 -196163046 + AluY SINE Alu 1 303 -8 252 333 34 0 chr4 6165304 6165421 -196162926 + MER103 DNA DNA 31 151 -15 184 239 130 33 chr4 6165560 6165652 -196162695 - MIR SINE MIR -78 130 30 22 0 0 0 chr4 6165893 6165915 -196162432 + AT_rich Low_complexity Low_complexity 1 22 0 2469 72 0 0 chr4 6166013 6166304 -196162043 + AluSx SINE Alu 1 291 -21 271 252 216 18 chr4 6166462 6166573 -196161774 + MIR SINE MIR 18 150 -112 266 320 105 63 chr4 6166706 6166942 -196161405 - L2 LINE L2 -75 3197 2941 2312 109 87 32 chr4 6166942 6167346 -196161001 - MSTA LTR MaLR 0 428 3 266 320 105 63 chr4 6167346 6167443 -196160904 - L2 LINE L2 -331 2941 2850 442 283 25 6 chr4 6167668 6167827 -196160520 + L1ME LINE L1 5566 5727 -394 437 290 24 12 chr4 6168238 6168407 -196159940 + GA-rich Low_complexity Low_complexity 5 175 0 191 283 9 88 chr4 6169160 6169273 -196159074 - L2 LINE L2 -237 3035 2932 2492 74 0 3 chr4 6169479 6169775 -196158572 + AluY SINE Alu 1 295 -16 353 232 181 36 chr4 6171640 6171827 -196156520 - MIR SINE MIR -11 251 34 199 189 0 0 chr4 6171900 6171937 -196156410 + MIR SINE MIR 112 148 -114 301 265 225 0 chr4 6172259 6172410 -196155937 + MIR SINE MIR 40 224 -38 281 308 0 33 chr4 6172633 6172724 -196155623 + L2 LINE L2 2673 2760 -554 426 278 49 0 chr4 6173106 6173250 -196155097 + MIR SINE MIR 73 223 -39 244 231 0 0 chr4 6173464 6173516 -196154831 + A-rich Low_complexity Low_complexity 4 55 0 542 286 164 8 chr4 6173531 6173793 -196154554 + L3 LINE CR1 1163 1465 -112 340 333 84 37 chr4 6175785 6176058 -196152289 + MLT1I LTR MaLR 98 383 -26 673 257 53 57 chr4 6176087 6176332 -196152015 - MIR SINE MIR 0 262 19 365 318 20 27 chr4 6176398 6176546 -196151801 - MIR3 SINE MIR -15 193 47 360 119 0 0 chr4 6176831 6176890 -196151457 + (TTCC)n Simple_repeat Simple_repeat 4 62 0 2256 97 7 3 chr4 6176901 6177189 -196151158 - AluSx SINE Alu -3 309 21 225 0 0 0 chr4 6177264 6177289 -196151058 + (CA)n Simple_repeat Simple_repeat 2 26 0 311 222 8 0 chr4 6177987 6178104 -196150243 + (CA)n Simple_repeat Simple_repeat 2 119 0 226 325 40 53 chr4 6178148 6178299 -196150048 + MIR SINE MIR 44 192 -70 222 191 0 0 chr4 6178893 6178935 -196149412 - MIR SINE MIR -113 149 108 27 0 0 0 chr4 6181805 6181832 -196146515 + GC_rich Low_complexity Low_complexity 1 27 0 225 132 57 19 chr4 6182225 6182278 -196146069 + (CCCCG)n Simple_repeat Simple_repeat 2 56 0 292 300 22 11 chr4 6183513 6183603 -196144744 - MIR3 SINE MIR -50 158 68 207 294 0 0 chr4 6184525 6184576 -196143771 - MIR SINE MIR -61 147 97 456 19 0 0 chr4 6184773 6184826 -196143521 + (CA)n Simple_repeat Simple_repeat 1 53 0 219 267 0 0 chr4 6185473 6185533 -196142814 + MIR SINE MIR 30 89 -119 195 255 21 0 chr4 6185744 6185791 -196142556 + L2 LINE L2 3266 3313 0 1244 154 25 57 chr4 6186394 6186674 -196141673 - MER46B DNA MER2_type -90 146 1 1708 191 49 47 chr4 6186745 6187136 -196141211 + MLT1C LTR MaLR 1 395 -72 2046 143 13 3 chr4 6187136 6187437 -196140910 - AluJo SINE Alu -4 308 5 1708 191 49 47 chr4 6187437 6187511 -196140836 + MLT1C LTR MaLR 395 467 0 237 279 0 0 chr4 6187911 6187972 -196140375 + MIR SINE MIR 87 147 -115 890 205 93 0 chr4 6189944 6190159 -196138188 + L1MCa LINE L1 19 253 -6173 3361 167 107 30 chr4 6190163 6190595 -196137752 + L1MCa LINE L1 777 1174 -5252 1598 204 42 0 chr4 6190595 6190879 -196137468 + AluJb SINE Alu 1 296 -16 3361 167 107 30 chr4 6190879 6191151 -196137196 + L1MCa LINE L1 1174 1424 -5002 2046 148 0 0 chr4 6191151 6191442 -196136905 + AluSx SINE Alu 1 291 -21 3361 167 107 30 chr4 6191442 6192063 -196136284 + L1MCa LINE L1 1424 2334 -4092 2344 110 0 0 chr4 6192063 6192371 -196135976 + AluSx SINE Alu 1 308 -4 3361 167 107 30 chr4 6192371 6192586 -196135761 + L1MCa LINE L1 2334 2531 -3895 22 0 0 0 chr4 6192726 6192748 -196135599 + AT_rich Low_complexity Low_complexity 1 22 0 1922 131 40 35 chr4 6193697 6194070 -196134277 + THE1C LTR MaLR 1 375 0 264 314 98 89 chr4 6194127 6194442 -196133905 + L2 LINE L2 2950 3267 -5 1942 163 31 16 chr4 6194835 6195216 -196133131 + MLT1B LTR MaLR 4 390 0 2083 123 0 0 chr4 6195668 6195944 -196132403 + AluSx SINE Alu 1 276 -36 180 77 0 0 chr4 6195945 6195971 -196132376 + (TAAA)n Simple_repeat Simple_repeat 2 27 0 238 330 62 9 chr4 6196177 6196289 -196132058 - MIR SINE MIR -67 195 78 249 81 0 0 chr4 6196638 6196675 -196131672 - MIR SINE MIR -65 143 107 244 229 29 14 chr4 6197374 6197444 -196130903 + LTR67 LTR ERVL 100 170 -387 2298 100 37 0 chr4 6197941 6198241 -196130106 - AluSx SINE Alu -1 311 1 510 217 0 25 chr4 6198434 6198554 -196129793 + MIR SINE MIR 49 165 -97 375 23 0 0 chr4 6198760 6198804 -196129543 + (CA)n Simple_repeat Simple_repeat 2 45 0 1625 201 69 38 chr4 6199014 6199184 -196129163 + MLT1C LTR MaLR 7 170 -297 2316 99 0 0 chr4 6199184 6199498 -196128849 + AluSg SINE Alu 1 314 0 1625 201 69 38 chr4 6199498 6199772 -196128575 + MLT1C LTR MaLR 170 467 0 213 121 0 0 chr4 6199928 6199961 -196128386 + (T)n Simple_repeat Simple_repeat 1 33 0 313 311 0 80 chr4 6200606 6200756 -196127591 - MIR SINE MIR -61 147 12 2271 117 0 13 chr4 6200848 6201164 -196127183 + AluSx SINE Alu 1 312 0 368 283 177 34 chr4 6201597 6201834 -196126513 - L1ME4a LINE L1 -1 6120 5850 185 222 16 48 chr4 6202517 6202580 -196125767 - MIR3 SINE MIR -54 154 94 445 314 106 0 chr4 6202721 6202909 -196125438 + MIR SINE MIR 28 235 -27 795 237 40 0 chr4 6203299 6203476 -196124871 + MER5A DNA MER1_type 1 184 -5 3540 218 26 5 chr4 6203961 6204774 -196123573 + L1M4 LINE L1 3512 4341 -1805 197 291 45 64 chr4 6205799 6205909 -196122438 - MIR SINE MIR -71 191 84 278 360 128 6 chr4 6206387 6206551 -196121796 - L3 LINE CR1 -3 1574 1391 773 247 67 9 chr4 6206645 6206868 -196121479 - MIR SINE MIR -15 247 12 215 374 17 35 chr4 6207866 6207981 -196120366 - MIR SINE MIR -62 146 34 2103 206 62 12 chr4 6208026 6208507 -196119840 + MLT1D LTR MaLR 1 505 0 297 300 120 0 chr4 6209545 6209645 -196118702 - MIR SINE MIR -132 130 19 618 247 24 12 chr4 6210806 6210976 -196117371 - MER5B DNA MER1_type -3 175 4 412 220 31 101 chr4 6211760 6211919 -196116428 + MIR3 SINE MIR 53 200 -8 302 328 72 0 chr4 6212435 6212560 -196115787 - MIR SINE MIR -97 165 32 378 268 9 36 chr4 6213072 6213184 -196115163 + L2 LINE L2 3205 3313 0 209 344 158 23 chr4 6213329 6213544 -196114803 - MIR SINE MIR -14 248 5 297 374 0 39 chr4 6213607 6213762 -196114585 - MIR SINE MIR -2 260 112 371 316 12 65 chr4 6213851 6214036 -196114311 - MIR3 SINE MIR -54 154 12 265 296 35 35 chr4 6214023 6214138 -196114209 + MIR3 SINE MIR 48 162 -46 * 526 226 57 31 chr4 6214246 6214405 -196113942 - Charlie8 DNA MER1_type -2183 234 72 2555 164 15 4 chr4 6214411 6214882 -196113465 + L1MB3 LINE L1 5677 6152 -31 246 159 0 0 chr4 6214893 6214937 -196113410 - L1MB3 LINE L1 -33 6150 6107 245 289 24 24 chr4 6214940 6215023 -196113324 - Charlie8 DNA MER1_type -2322 95 13 299 283 142 0 chr4 6215615 6215728 -196112619 - MIR SINE MIR -63 145 17 331 314 59 13 chr4 6216099 6216252 -196112095 - MIR SINE MIR -41 221 62 285 235 31 41 chr4 6216789 6216887 -196111460 + Charlie4 DNA MER1_type 1860 1956 -5 251 306 71 66 chr4 6216930 6217126 -196111221 - L2 LINE L2 0 3272 3076 209 267 307 0 chr4 6217398 6217499 -196110848 - L2 LINE L2 -225 3047 2916 422 276 41 41 chr4 6217971 6218141 -196110206 - MER5A DNA MER1_type 0 189 20 380 305 65 5 chr4 6218538 6218738 -196109609 + L1MEd LINE L1 848 1059 -5060 576 259 45 77 chr4 6218750 6218970 -196109377 - L2 LINE L2 -225 3088 2876 329 294 73 0 chr4 6218976 6219112 -196109235 + L3 LINE CR1 1257 1402 -175 252 59 0 0 chr4 6219112 6219146 -196109201 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 416 291 86 32 chr4 6219159 6219379 -196108968 - L2 LINE L2 0 3313 3082 190 244 0 24 chr4 6219575 6219616 -196108731 - L2 LINE L2 -112 3160 3121 364 322 94 31 chr4 6220007 6220327 -196108020 + L2 LINE L2 2557 2896 -418 4282 173 9 0 chr4 6220409 6221203 -196107144 - L1 LINE L1 -809 5337 4537 2504 61 13 13 chr4 6221982 6222293 -196106054 - AluY SINE Alu 0 311 1 232 411 83 11 chr4 6222314 6222494 -196105853 - L3 LINE CR1 -30 1547 1355 279 114 0 0 chr4 6222777 6222830 -196105517 + MER63A DNA MER1_type 1 53 -157 2364 89 0 10 chr4 6222855 6223159 -196105188 + AluSc SINE Alu 6 306 -3 484 211 122 58 chr4 6223183 6223339 -196105008 + MER63A DNA MER1_type 44 209 -1 342 0 0 0 chr4 6223345 6223383 -196104964 + (TG)n Simple_repeat Simple_repeat 2 39 0 216 67 0 0 chr4 6223406 6223436 -196104911 + (TGAA)n Simple_repeat Simple_repeat 2 31 0 2010 232 48 32 chr4 6223639 6224207 -196104140 - MER74B LTR ERVL 0 622 46 608 181 29 0 chr4 6224213 6224318 -196104029 + MIR SINE MIR 76 183 -79 197 345 0 0 chr4 6224413 6224471 -196103876 + L2 LINE L2 3240 3297 -16 401 287 0 0 chr4 6224927 6225056 -196103291 + L1ME4a LINE L1 5581 5709 -412 361 241 102 91 chr4 6225104 6225294 -196103053 + L1ME4a LINE L1 5836 6031 -90 2482 60 17 0 chr4 6225294 6225593 -196102754 - AluY SINE Alu -7 304 1 361 241 102 91 chr4 6225593 6225667 -196102680 + L1ME4a LINE L1 6031 6103 -18 189 400 0 0 chr4 6226168 6226243 -196102104 + L2 LINE L2 2639 2713 -601 325 327 127 22 chr4 6226613 6226888 -196101459 + MLT1L LTR MaLR 312 615 0 481 246 8 0 chr4 6227664 6227798 -196100549 - LTR16C LTR ERVL 0 491 357 316 203 14 29 chr4 6228221 6228290 -196100057 - MIR SINE MIR -108 154 87 2406 90 30 0 chr4 6228492 6228792 -196099555 - AluSc SINE Alu 0 309 1 366 331 23 39 chr4 6229368 6229498 -196098849 - MIR SINE MIR -118 144 17 471 256 40 45 chr4 6229879 6230055 -196098292 + MER5B DNA MER1_type 4 178 0 249 191 0 0 chr4 6230076 6230123 -196098224 - MIR SINE MIR -71 137 91 1556 171 62 50 chr4 6230940 6231279 -196097068 - MER2 DNA MER2_type 0 344 2 580 306 153 14 chr4 6231300 6231522 -196096825 + MIR SINE MIR 9 261 -1 2306 110 3 0 chr4 6231565 6231865 -196096482 - AluSx SINE Alu -11 301 1 294 312 52 0 chr4 6233535 6233612 -196094735 - L2 LINE L2 -19 3253 3173 543 279 58 0 chr4 6234213 6234385 -196093962 - MIR SINE MIR -53 209 28 2100 153 38 28 chr4 6234827 6235375 -196092972 + MLT2A2 LTR ERVL 1 554 0 190 268 196 18 chr4 6236783 6236895 -196091452 - L2 LINE L2 -85 3187 3056 1606 246 19 49 chr4 6237244 6237715 -196090632 + L1MB5 LINE L1 5712 6168 -6 206 313 92 46 chr4 6237958 6238089 -196090258 - L2 LINE L2 0 3272 3136 1980 124 39 72 chr4 6238529 6238917 -196089430 + THE1C LTR MaLR 1 375 0 432 55 0 0 chr4 6239434 6239489 -196088858 + (CA)n Simple_repeat Simple_repeat 1 55 0 288 313 0 42 chr4 6240070 6240166 -196088181 + L2 LINE L2 3178 3269 -3 306 346 30 0 chr4 6240178 6240279 -196088068 - L1ME LINE L1 -320 5801 5698 326 244 13 0 chr4 6241276 6241354 -196086993 + MIR3 SINE MIR 107 185 -23 249 322 44 11 chr4 6241855 6241945 -196086402 + L2 LINE L2 3140 3232 -40 231 350 26 26 chr4 6242549 6242666 -196085681 - MIR SINE MIR -63 145 29 1556 172 0 23 chr4 6243566 6243827 -196084520 - AluJo SINE Alu -53 259 5 401 304 43 7 chr4 6243893 6244031 -196084316 + MIR SINE MIR 108 250 -12 310 248 9 29 chr4 6244976 6245081 -196083266 + GA-rich Low_complexity Low_complexity 4 106 0 297 243 90 5 chr4 6245193 6245314 -196083033 + MIR SINE MIR 94 227 -35 270 278 133 34 chr4 6245456 6245690 -196082657 + L2 LINE L2 2676 2932 -382 947 250 39 4 chr4 6245948 6246180 -196082167 + MIR SINE MIR 2 241 -21 384 293 230 11 chr4 6246351 6246525 -196081822 + L1MEd LINE L1 300 511 -5608 272 323 67 24 chr4 6246567 6246595 -196081752 + L1MEd LINE L1 652 677 -5442 2444 85 0 0 chr4 6246595 6246900 -196081447 + AluSg SINE Alu 1 305 -5 272 323 67 24 chr4 6246900 6247035 -196081312 + L1MEd LINE L1 677 822 -5297 328 221 167 135 chr4 6247063 6247285 -196081062 - MIR SINE MIR -5 257 29 364 275 76 72 chr4 6247291 6247373 -196080974 + L1MEd LINE L1 990 1070 -5240 2417 92 0 0 chr4 6247373 6247677 -196080670 + AluSq SINE Alu 5 308 -5 364 275 76 72 chr4 6247677 6248287 -196080060 + L1MEd LINE L1 1070 1734 -4576 1129 281 55 30 chr4 6248670 6249445 -196078902 + L1MEd LINE L1 2114 2908 -3221 277 317 79 30 chr4 6249637 6249738 -196078609 + MIR3 SINE MIR 65 170 -38 192 77 0 0 chr4 6249871 6249897 -196078450 + (T)n Simple_repeat Simple_repeat 1 26 0 2209 80 7 11 chr4 6250049 6250362 -196077985 + AluSq SINE Alu 1 312 0 2838 129 16 0 chr4 6250955 6251381 -196076966 + MER72 LTR ERV1 290 722 0 1508 245 55 52 chr4 6251673 6252216 -196076131 + MLT1H LTR MaLR 2 546 -3 747 313 9 8 chr4 6252255 6252501 -196075846 - MIR SINE MIR -1 261 16 212 305 29 38 chr4 6252638 6252743 -196075604 - L2 LINE L2 0 3272 3169 195 161 232 0 chr4 6252817 6252873 -196075474 - MIR SINE MIR -113 149 81 399 286 67 37 chr4 6253371 6253600 -196074747 + MIR SINE MIR 4 237 -25 673 229 202 0 chr4 6253646 6253864 -196074483 - MIR SINE MIR 0 262 1 272 264 74 47 chr4 6253946 6254094 -196074253 + L1ME4a LINE L1 5967 6118 -3 381 256 31 56 chr4 6254571 6254731 -196073616 + MIR SINE MIR 57 212 -50 340 326 0 0 chr4 6256025 6256123 -196072224 - MIR SINE MIR -119 143 46 238 250 44 0 chr4 6256667 6256735 -196071612 - MIR3 SINE MIR -48 160 90 537 291 58 5 chr4 6256959 6257165 -196071182 + LTR33 LTR ERVL 50 266 -255 2976 128 22 27 chr4 6257474 6258032 -196070315 + LTR10E LTR ERV1 11 609 0 621 244 51 97 chr4 6259343 6259472 -196068875 + L1MC5 LINE L1 7120 7253 -708 2314 123 0 0 chr4 6259472 6259604 -196068743 + AluSx SINE Alu 1 132 -180 2225 104 7 3 chr4 6259604 6259901 -196068446 + AluSc SINE Alu 1 298 -11 2314 123 0 0 chr4 6259901 6260077 -196068270 + AluSx SINE Alu 131 309 -3 621 244 51 97 chr4 6260077 6260378 -196067969 + L1MC5 LINE L1 7253 7530 -431 1732 182 6 88 chr4 6260380 6260794 -196067553 + L1MB3 LINE L1 5744 6190 7 2391 99 0 7 chr4 6260794 6261096 -196067251 + AluSq SINE Alu 1 300 -13 1732 182 6 88 chr4 6261096 6261126 -196067221 + L1MB3 LINE L1 6190 6150 -33 348 67 34 157 chr4 6261126 6261215 -196067132 + MADE1 DNA Mariner 2 79 -1 1732 182 6 88 chr4 6261215 6261246 -196067101 + L1MB3 LINE L1 6149 6181 -2 720 257 124 40 chr4 6261246 6261600 -196066747 + L1MC5 LINE L1 7533 7916 -45 191 219 45 6 chr4 6261618 6261695 -196066652 + MIR SINE MIR 49 115 -93 201 303 15 0 chr4 6261884 6261950 -196066397 + L2 LINE L2 3231 3297 -16 348 83 0 0 chr4 6261958 6262006 -196066341 + (TGAA)n Simple_repeat Simple_repeat 2 49 0 341 245 51 10 chr4 6262472 6262570 -196065777 - MIR SINE MIR -75 133 32 325 247 12 0 chr4 6263169 6263250 -196065097 - L2 LINE L2 -6 3307 3226 319 73 36 0 chr4 6263320 6263375 -196064972 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 291 217 58 92 chr4 6264294 6264414 -196063933 + MLT1H LTR MaLR 421 536 -13 239 235 0 0 chr4 6264434 6264485 -196063862 - MIR SINE MIR -145 117 67 237 258 48 16 chr4 6264885 6264947 -196063400 - MER91A DNA MER1_type -10 186 123 324 297 195 0 chr4 6264986 6265114 -196063233 - MER91A DNA MER1_type -43 153 1 329 301 75 8 chr4 6266275 6266408 -196061939 - MIR SINE MIR -21 241 100 303 302 35 59 chr4 6266970 6267139 -196061208 + L1MC/D LINE L1 5494 5658 -2150 381 193 36 0 chr4 6267139 6267222 -196061125 - Tigger3(Golem) DNA MER2_type 0 3029 2944 390 252 109 0 chr4 6267328 6267475 -196060872 + L2 LINE L2 2928 3090 -182 360 206 63 48 chr4 6268944 6269070 -196059277 + L1MD3 LINE L1 7853 7980 -15 209 354 135 25 chr4 6269488 6269807 -196058540 + L2 LINE L2 2918 3271 -1 1092 176 39 5 chr4 6269991 6270196 -196058151 - MER20 DNA MER1_type -7 212 1 185 384 73 33 chr4 6270806 6270957 -196057390 - MIR SINE MIR 0 262 106 254 315 19 94 chr4 6271654 6271867 -196056480 - L2 LINE L2 -80 3192 2996 940 81 0 0 chr4 6271967 6272078 -196056269 + AluSx SINE Alu 13 123 -190 1362 126 0 0 chr4 6272233 6272415 -196055932 + AluSx SINE Alu 112 293 -19 266 273 13 0 chr4 6272436 6272513 -196055834 - MER116 DNA Mariner -1 79 2 866 264 35 9 chr4 6272514 6272741 -196055606 - MIR SINE MIR -3 259 27 228 313 15 0 chr4 6273253 6273320 -196055027 - L2 LINE L2 -4 3268 3201 457 311 79 6 chr4 6273702 6273879 -196054468 + MIR SINE MIR 10 199 -63 2288 112 23 0 chr4 6274079 6274384 -196053963 - AluSx SINE Alu 0 312 1 262 342 0 52 chr4 6274540 6274695 -196053652 - MIR SINE MIR 0 262 116 334 301 128 15 chr4 6274816 6275012 -196053335 - MIR SINE MIR -19 243 26 2532 79 0 0 chr4 6275577 6275880 -196052467 + AluSg SINE Alu 1 303 -7 199 315 33 22 chr4 6276626 6276718 -196051629 - MIR3 SINE MIR -49 159 67 266 284 68 0 chr4 6276906 6276980 -196051367 - MIR SINE MIR -111 151 73 240 70 23 0 chr4 6277168 6277211 -196051136 + L1PB1 LINE L1 6107 6150 -1 2158 127 3 0 chr4 6277283 6277590 -196050757 + AluSx SINE Alu 1 308 -4 2285 90 14 0 chr4 6277749 6278037 -196050310 - AluSc SINE Alu -17 292 1 303 297 55 21 chr4 6278164 6278309 -196050038 - L1ME LINE L1 -380 5741 5592 370 336 0 15 chr4 6279253 6279390 -196048957 + L2 LINE L2 2949 3083 -189 259 330 43 27 chr4 6279589 6279774 -196048573 + L2 LINE L2 2864 3051 -221 411 380 22 11 chr4 6280026 6280210 -196048137 + MIR SINE MIR 7 192 -70 255 276 20 51 chr4 6280703 6280801 -196047546 - MIR SINE MIR -8 254 160 2450 75 7 0 chr4 6283098 6283392 -196044955 - AluSc SINE Alu -13 296 1 259 303 65 45 chr4 6283526 6283681 -196044666 + MIR3 SINE MIR 14 171 -37 289 234 70 16 chr4 6283937 6284065 -196044282 + MIR3 SINE MIR 3 137 -71 196 330 70 51 chr4 6284107 6284380 -196043967 - L2 LINE L2 -1 3271 2994 209 253 209 0 chr4 6285180 6285271 -196043076 + MIR SINE MIR 36 145 -63 263 254 160 41 chr4 6285566 6285735 -196042612 - MIR3 SINE MIR -17 191 3 2554 86 0 3 chr4 6285946 6286259 -196042088 + AluSx SINE Alu 1 312 0 1652 136 93 4 chr4 6286585 6286878 -196041469 - AluJb SINE Alu 0 316 1 2492 68 0 34 chr4 6287253 6287575 -196040772 + AluY SINE Alu 1 311 0 736 264 50 21 chr4 6287658 6287900 -196040447 + MIR SINE MIR 14 262 0 859 279 119 22 chr4 6287904 6288356 -196039991 + MLT1H1 LTR MaLR 5 500 -55 245 371 19 9 chr4 6288595 6288808 -196039539 - L1MC/D LINE L1 -1959 5849 5635 1266 195 19 11 chr4 6288955 6289318 -196039029 + L1M4 LINE L1 5188 5556 -628 504 260 82 32 chr4 6289341 6289582 -196038765 + L1ME LINE L1 1003 1316 -5056 324 306 46 31 chr4 6289667 6289863 -196038484 + L1ME LINE L1 5477 5675 -446 506 363 46 16 chr4 6290051 6290547 -196037800 + L1MC4a LINE L1 5400 5910 -1898 255 121 35 17 chr4 6290644 6290702 -196037645 - L1MD1 LINE L1 -10 6232 6174 297 133 0 0 chr4 6290716 6290761 -196037586 - Alu SINE Alu -13 289 245 755 244 45 25 chr4 6290761 6290962 -196037385 - L1MD2 LINE L1 -76 6283 6079 220 255 0 0 chr4 6292159 6292210 -196036137 + (CA)n Simple_repeat Simple_repeat 2 52 0 21 36 0 0 chr4 6292217 6292245 -196036102 + AT_rich Low_complexity Low_complexity 1 28 0 2501 83 3 0 chr4 6292492 6292793 -196035554 - AluSp SINE Alu -11 302 1 635 250 38 19 chr4 6293656 6293816 -196034531 + MER63 DNA MER1_type 1 789 -47 247 319 14 0 chr4 6294065 6294137 -196034210 - L2 LINE L2 -522 2792 2720 779 272 92 10 chr4 6294250 6294625 -196033722 + L2 LINE L2 2624 3040 -273 597 318 68 58 chr4 6294653 6296777 -196031570 + L1MEc LINE L1 94 2246 -4150 2139 138 0 3 chr4 6296777 6297081 -196031266 + AluSx SINE Alu 3 305 -7 597 318 68 58 chr4 6297081 6297134 -196031213 + L1MEc LINE L1 2246 2297 -4099 * 1120 263 45 12 chr4 6297109 6297535 -196030812 + L1MEc LINE L1 2561 3000 -3215 2490 87 0 0 chr4 6297628 6297926 -196030421 - AluSg SINE Alu -12 298 1 667 226 99 31 chr4 6298026 6298218 -196030129 + L1MEc LINE L1 2987 3207 -3008 2266 113 3 3 chr4 6298218 6298528 -196029819 + AluSx SINE Alu 1 310 -2 667 226 99 31 chr4 6298528 6298627 -196029720 + L1MEc LINE L1 3207 3298 -2917 280 242 19 12 chr4 6298641 6298802 -196029545 + GA-rich Low_complexity Low_complexity 1 162 0 186 296 43 26 chr4 6298918 6299033 -196029314 - MIR SINE MIR -126 136 20 462 311 37 47 chr4 6299185 6299375 -196028972 + MIR SINE MIR 10 197 -65 855 310 113 25 chr4 6301980 6302307 -196026040 + L2 LINE L2 2837 3213 -100 608 271 155 0 chr4 6302307 6302488 -196025859 - MER3 DNA MER1_type 0 209 1 855 310 113 25 chr4 6302488 6302595 -196025752 + L2 LINE L2 3213 3309 -4 346 191 0 0 chr4 6303119 6303182 -196025165 + MIR SINE MIR 83 145 -117 192 290 97 0 chr4 6303392 6303485 -196024862 - MIR SINE MIR -74 134 33 196 335 110 19 chr4 6303530 6303685 -196024662 + MIR SINE MIR 70 238 -24 208 243 32 55 chr4 6304234 6304338 -196024009 + MIR SINE MIR 44 146 -62 2163 125 0 0 chr4 6304624 6304936 -196023411 + AluSx SINE Alu 1 312 0 23 0 0 0 chr4 6304936 6304959 -196023388 + AT_rich Low_complexity Low_complexity 1 23 0 288 341 12 54 chr4 6305212 6305379 -196022968 + MIR SINE MIR 36 195 -67 198 156 0 0 chr4 6305669 6305701 -196022646 - MIR SINE MIR -67 141 110 2006 114 13 13 chr4 6305881 6306196 -196022151 + MER1B DNA MER1_type 25 339 0 396 0 0 0 chr4 6306564 6306608 -196021739 + (CA)n Simple_repeat Simple_repeat 2 45 0 276 301 93 83 chr4 6306648 6306841 -196021506 + L2 LINE L2 3077 3271 -1 366 268 62 10 chr4 6306884 6306981 -196021366 - L2 LINE L2 -3 3310 3209 203 290 124 51 chr4 6307520 6307737 -196020610 + L2 LINE L2 2849 3081 -191 209 364 10 10 chr4 6307787 6307886 -196020461 + MER5B DNA MER1_type 5 103 -75 324 287 32 25 chr4 6308060 6308217 -196020130 + GA-rich Low_complexity Low_complexity 2 159 0 385 259 35 9 chr4 6308349 6308465 -196019882 - L2 LINE L2 -8 3305 3187 401 347 31 26 chr4 6308472 6308665 -196019682 - MIR3 SINE MIR -14 194 1 419 321 71 43 chr4 6308734 6309242 -196019105 - L1ME4a LINE L1 -59 6062 5541 371 324 48 53 chr4 6309273 6309480 -196018867 - L1ME4a LINE L1 -2330 5478 5273 184 351 168 15 chr4 6309711 6309913 -196018434 + L2 LINE L2 3004 3236 -36 415 225 116 29 chr4 6310332 6310470 -196017877 + MIR SINE MIR 34 183 -79 366 214 0 12 chr4 6311938 6312022 -196016325 + MLT1A1 LTR MaLR 1 83 -282 1626 79 19 5 chr4 6312241 6312457 -196015890 - AluSg/x SINE Alu -11 299 81 494 289 75 6 chr4 6312758 6312917 -196015430 - L2 LINE L2 -1 3312 3143 1559 190 91 23 chr4 6313113 6313544 -196014803 + MLT1C LTR MaLR 6 465 -2 323 318 70 0 chr4 6313926 6314055 -196014292 + MIR SINE MIR 71 208 -54 958 148 9 7 chr4 6314498 6314748 -196013599 + (ATGGTG)n Simple_repeat Simple_repeat 1 427 0 1006 137 12 2 chr4 6314748 6315170 -196013177 + (ATG)n Simple_repeat Simple_repeat 1 604 0 328 301 6 25 chr4 6315899 6316062 -196012285 + GA-rich Low_complexity Low_complexity 2 161 0 831 75 0 0 chr4 6316130 6316250 -196012097 + (TCCA)n Simple_repeat Simple_repeat 1 120 0 382 287 16 25 chr4 6316250 6316372 -196011975 - L2 LINE L2 -13 3300 3180 372 248 90 8 chr4 6317233 6317366 -196010981 + MLT1J2 LTR MaLR 67 210 -240 404 211 22 0 chr4 6317458 6317548 -196010799 + MLT1I LTR MaLR 317 408 -1 231 342 40 20 chr4 6317729 6317878 -196010469 + L2 LINE L2 2636 2787 -527 241 250 65 9 chr4 6318139 6318247 -196010100 + MER103 DNA DNA 6 119 -47 189 238 0 0 chr4 6318334 6318376 -196009971 - MIR SINE MIR -55 153 112 477 264 48 0 chr4 6318698 6318823 -196009524 - MIR SINE MIR -36 226 96 963 213 54 77 chr4 6318988 6319298 -196009049 + MLT1A1 LTR MaLR 1 304 -61 1664 171 0 49 chr4 6319298 6319603 -196008744 - AluJb SINE Alu -22 290 1 963 213 54 77 chr4 6319603 6319645 -196008702 + MLT1A1 LTR MaLR 304 345 -20 436 306 19 32 chr4 6320192 6320349 -196007998 + MIR SINE MIR 9 163 -99 236 360 56 8 chr4 6320460 6320585 -196007762 + L2 LINE L2 3103 3233 -39 613 219 27 27 chr4 6320920 6321066 -196007281 + L2 LINE L2 3167 3312 -1 427 282 63 14 chr4 6322015 6322157 -196006190 - MER5B DNA MER1_type -16 162 14 566 208 101 0 chr4 6322178 6322327 -196006020 - MER5A DNA MER1_type 0 189 26 193 331 39 47 chr4 6322306 6322433 -196005914 - MIR SINE MIR -96 166 41 * 410 288 88 12 chr4 6322410 6322580 -196005767 + MIR SINE MIR 80 262 0 180 367 60 60 chr4 6322616 6322815 -196005532 + L2 LINE L2 3032 3230 -42 337 280 150 24 chr4 6323288 6323495 -196004852 + L2 LINE L2 2553 2785 -529 264 308 98 49 chr4 6323492 6323778 -196004569 + L2 LINE L2 2921 3220 -52 * 457 309 53 0 chr4 6324185 6324337 -196004010 + MIR SINE MIR 30 189 -73 553 172 15 20 chr4 6324446 6324838 -196003509 + CT-rich Low_complexity Low_complexity 1 390 0 1177 188 64 38 chr4 6324838 6325104 -196003243 - AluJb SINE Alu -39 273 1 267 278 121 52 chr4 6325160 6325333 -196003014 - MIR3 SINE MIR -20 188 4 23 92 0 0 chr4 6326642 6326707 -196001640 + GC_rich Low_complexity Low_complexity 1 65 0 27 85 0 11 chr4 6326885 6326954 -196001393 + GC_rich Low_complexity Low_complexity 1 70 -23 198 71 0 0 chr4 6326954 6326982 -196001365 + (CTG)n Simple_repeat Simple_repeat 1 28 0 27 85 0 11 chr4 6326982 6327006 -196001341 + GC_rich Low_complexity Low_complexity 70 93 0 198 0 0 0 chr4 6329378 6329400 -195998947 + (TG)n Simple_repeat Simple_repeat 2 23 0 292 74 0 37 chr4 6330804 6330858 -195997489 + (TCCCC)n Simple_repeat Simple_repeat 2 53 0 2375 158 21 8 chr4 6331179 6331564 -195996783 - MLT1B LTR MaLR 0 390 1 240 296 83 15 chr4 6331704 6331836 -195996511 - L2 LINE L2 -213 3059 2919 714 319 32 0 chr4 6332006 6332222 -195996125 + MIR SINE MIR 28 250 -12 214 360 45 0 chr4 6334289 6334400 -195993947 + L3 LINE CR1 1415 1530 -47 352 250 11 22 chr4 6334644 6334736 -195993611 + MIR3 SINE MIR 109 199 -9 247 247 49 23 chr4 6334872 6334986 -195993361 + MIR SINE MIR 41 153 -62 330 301 204 28 chr4 6335162 6335481 -195992866 - L2 LINE L2 -20 3252 2878 491 377 20 16 chr4 6337095 6337339 -195991008 - MIR SINE MIR 0 262 18 1990 121 28 0 chr4 6337352 6337634 -195990713 + AluSx SINE Alu 1 290 -22 633 99 0 0 chr4 6337648 6337729 -195990618 + AluSg/x SINE Alu 210 290 -22 633 99 0 0 chr4 6337743 6337824 -195990523 + AluSg/x SINE Alu 210 290 -22 3163 176 15 19 chr4 6337844 6338422 -195989925 - L1MB3 LINE L1 0 6183 5606 1857 164 0 7 chr4 6338422 6338720 -195989627 - AluJo SINE Alu -16 296 1 3163 176 15 19 chr4 6338720 6338736 -195989611 - L1MB3 LINE L1 -577 5606 5591 434 218 32 51 chr4 6339475 6339631 -195988716 - Charlie4 DNA MER1_type 0 1961 1809 893 234 40 4 chr4 6339663 6339915 -195988432 - Charlie4 DNA MER1_type -1667 294 34 2258 96 0 10 chr4 6339963 6340277 -195988070 + AluSx SINE Alu 1 311 -1 320 239 103 60 chr4 6340419 6340536 -195987811 + L2 LINE L2 3175 3296 -17 222 37 0 0 chr4 6341031 6341058 -195987289 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 235 321 12 0 chr4 6342642 6342723 -195985624 - L2 LINE L2 -1 3271 3190 216 0 0 0 chr4 6342838 6342862 -195985485 + (GCTTG)n Simple_repeat Simple_repeat 3 26 0 185 400 94 12 chr4 6343233 6343403 -195984944 + MIR SINE MIR 60 243 -19 1677 166 11 0 chr4 6344504 6344781 -195983566 - AluJo SINE Alu -30 282 3 191 310 186 21 chr4 6344843 6344988 -195983359 + MIR SINE MIR 57 225 -37 207 69 0 0 chr4 6345416 6345445 -195982902 + (GGGA)n Simple_repeat Simple_repeat 2 30 0 1980 109 60 0 chr4 6345587 6345871 -195982476 - AluSx SINE Alu -11 301 1 867 200 23 36 chr4 6346565 6346785 -195981562 - MLT1K LTR MaLR 0 588 372 361 269 31 8 chr4 6346855 6346985 -195981362 - MLT1K LTR MaLR -331 257 125 412 260 32 8 chr4 6347851 6347974 -195980373 - MIR SINE MIR -63 145 20 1664 207 102 8 chr4 6348363 6348725 -195979622 + MSTD LTR MaLR 1 396 0 250 333 0 0 chr4 6348849 6348918 -195979429 - L3 LINE CR1 -101 1476 1408 4400 127 44 83 chr4 6349137 6350152 -195978195 + pTR5 LTR ERV1 729 2025 -413 364 235 10 0 chr4 6350152 6350250 -195978097 + LTR30 LTR ERV1 544 642 -80 1229 98 57 0 chr4 6350251 6350445 -195977902 + LTR12 LTR ERV1 377 581 -133 1860 214 110 2 chr4 6350591 6351044 -195977303 - MLT1D LTR MaLR 0 505 4 331 264 104 57 chr4 6353078 6353290 -195975057 + L2 LINE L2 2747 2968 -346 270 300 25 0 chr4 6353568 6353648 -195974699 - MER5B DNA MER1_type -43 135 54 2568 90 33 11 chr4 6353667 6354034 -195974313 - THE1C LTR MaLR 0 375 1 219 315 41 68 chr4 6355464 6355610 -195972737 - MER5A DNA MER1_type -1 188 47 * 232 287 52 73 chr4 6355486 6355622 -195972725 + MER5A DNA MER1_type 35 167 -22 392 323 138 4 chr4 6355823 6356055 -195972292 - L2 LINE L2 -9 3263 3001 413 300 45 35 chr4 6356056 6356256 -195972091 - L2 LINE L2 -4 3309 3108 1478 246 130 6 chr4 6356367 6356874 -195971473 + L1MB8 LINE L1 5603 6172 -6 490 367 72 30 chr4 6357509 6357537 -195970810 - L1ME4a LINE L1 -196 5925 5900 237 33 0 0 chr4 6357537 6357567 -195970780 + (CA)n Simple_repeat Simple_repeat 1 30 0 490 367 72 30 chr4 6357567 6357843 -195970504 - L1ME4a LINE L1 -221 5900 5608 231 297 148 16 chr4 6358063 6358191 -195970156 + MIR SINE MIR 28 172 -90 871 135 135 6 chr4 6358777 6358955 -195969392 - MSTA LTR MaLR -227 201 1 257 333 0 0 chr4 6359278 6359362 -195968985 + L2 LINE L2 2987 3070 -202 289 304 72 16 chr4 6359495 6359620 -195968727 + L2 LINE L2 3134 3265 -7 638 304 65 0 chr4 6360016 6360263 -195968084 - MLT1G LTR MaLR -316 274 12 318 292 205 11 chr4 6360388 6360573 -195967774 - MIR SINE MIR -8 254 34 1335 196 108 25 chr4 6362260 6362613 -195965734 - MLT1B LTR MaLR -8 382 1 307 130 0 14 chr4 6365091 6365152 -195963195 - MLT2C1 LTR ERVL 0 397 350 1262 205 28 75 chr4 6365221 6365623 -195962724 - MLT2D LTR ERVL -40 480 1 390 91 0 0 chr4 6365671 6365726 -195962621 + (TCCA)n Simple_repeat Simple_repeat 4 58 0 195 260 20 0 chr4 6365729 6365779 -195962568 - L2 LINE L2 -1 3312 3262 206 297 55 61 chr4 6365836 6366001 -195962346 - L2 LINE L2 -162 3110 2947 349 339 60 12 chr4 6367868 6368036 -195960311 + MIR SINE MIR 36 211 -51 247 176 20 0 chr4 6368054 6368105 -195960242 + MIR3 SINE MIR 105 156 -52 209 273 0 0 chr4 6368869 6368913 -195959434 + L2 LINE L2 3215 3258 -14 398 308 0 0 chr4 6369499 6369606 -195958741 - MIR SINE MIR -75 187 81 266 222 86 37 chr4 6370131 6370212 -195958135 - L2 LINE L2 -49 3264 3180 579 284 72 18 chr4 6370297 6370631 -195957716 - L2 LINE L2 -143 3170 2819 2156 121 3 0 chr4 6370736 6371042 -195957305 - AluSx SINE Alu -5 307 1 228 67 0 0 chr4 6371689 6371719 -195956628 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 285 196 0 0 chr4 6371832 6371883 -195956464 + MIR SINE MIR 104 154 -108 192 231 0 0 chr4 6372707 6372759 -195955588 + (TG)n Simple_repeat Simple_repeat 1 52 0 206 301 43 21 chr4 6374209 6374302 -195954045 + MIR SINE MIR 45 139 -69 341 148 0 0 chr4 6375028 6375089 -195953258 - MER53 DNA DNA -2 187 127 2126 85 0 14 chr4 6375089 6375390 -195952957 - AluSq SINE Alu 0 307 11 257 303 28 56 chr4 6375661 6375803 -195952544 - L2 LINE L2 -18 3295 3158 1640 164 20 30 chr4 6376359 6376658 -195951689 - AluJo SINE Alu -10 302 7 656 252 86 13 chr4 6377538 6377954 -195950393 - MER68 LTR ERV1 -9 553 72 413 294 94 25 chr4 6379624 6379784 -195948563 + MIR SINE MIR 20 190 -72 326 247 27 0 chr4 6380001 6380074 -195948273 - MIR SINE MIR -56 152 78 477 242 61 15 chr4 6382614 6382746 -195945601 + MIR SINE MIR 77 214 -48 241 298 70 9 chr4 6382791 6382905 -195945442 + MIR3 SINE MIR 83 203 -5 869 231 141 27 chr4 6383245 6383761 -195944586 - MLT1G LTR MaLR 0 577 19 532 291 51 15 chr4 6383778 6383974 -195944373 - MIR SINE MIR -12 250 48 2033 121 0 3 chr4 6384183 6384501 -195943846 + AluSx SINE Alu 1 317 0 368 296 38 8 chr4 6385190 6385322 -195943025 + MIR3 SINE MIR 22 157 -51 476 283 0 50 chr4 6385327 6385507 -195942840 - MLT1K LTR MaLR -16 572 402 264 342 51 25 chr4 6385734 6385892 -195942455 + MIR SINE MIR 5 166 -96 273 284 32 65 chr4 6385895 6386050 -195942297 - MLT1J LTR MaLR -231 280 131 310 247 26 13 chr4 6386681 6386758 -195941589 + L1ME4a LINE L1 6044 6121 0 310 281 9 53 chr4 6386860 6386974 -195941373 + MER94 DNA DNA 3 111 -23 3412 175 27 2 chr4 6388139 6388891 -195939456 + L1PB4 LINE L1 5381 6164 -2 219 366 59 0 chr4 6388954 6389055 -195939292 + MIR SINE MIR 75 181 -81 185 229 213 0 chr4 6389110 6389171 -195939176 - MER5A DNA MER1_type -84 105 32 249 257 0 0 chr4 6389233 6389303 -195939044 + (TG)n Simple_repeat Simple_repeat 1 70 0 316 278 201 16 chr4 6389363 6389557 -195938790 - L2 LINE L2 -42 3230 3001 431 176 0 0 chr4 6390412 6390486 -195937861 - MIR SINE MIR -110 152 79 256 175 140 0 chr4 6390910 6390967 -195937380 + MIR SINE MIR 81 145 -117 433 145 0 0 chr4 6391027 6391096 -195937251 - THE1C LTR MaLR 0 375 307 1951 148 0 13 chr4 6391096 6391406 -195936941 - AluSx SINE Alu -1 311 6 244 260 0 0 chr4 6391510 6391560 -195936787 + (TGG)n Simple_repeat Simple_repeat 2 51 0 218 342 0 0 chr4 6393666 6393742 -195934605 + L2 LINE L2 3197 3272 0 261 119 0 0 chr4 6393742 6393784 -195934563 + (TGAG)n Simple_repeat Simple_repeat 2 43 0 266 267 89 52 chr4 6395032 6395223 -195933124 + L2 LINE L2 3027 3224 -89 2016 229 53 58 chr4 6395326 6395963 -195932384 + L1ME1 LINE L1 5491 6126 -40 2297 95 0 3 chr4 6395963 6396268 -195932079 + AluSq SINE Alu 1 304 -9 2016 229 53 58 chr4 6396268 6396304 -195932043 + L1ME1 LINE L1 6126 6161 -5 260 146 0 139 chr4 6398361 6398512 -195929835 + (CTGGGG)n Simple_repeat Simple_repeat 3 132 0 545 308 31 39 chr4 6398680 6398940 -195929407 - Charlie8 DNA MER1_type -2159 258 1 240 86 0 0 chr4 6398967 6399002 -195929345 + (TTCA)n Simple_repeat Simple_repeat 3 37 0 215 262 16 16 chr4 6400679 6400740 -195927607 + MIR SINE MIR 81 141 -67 261 224 17 0 chr4 6400844 6400902 -195927445 + L2 LINE L2 2997 3055 -217 186 43 0 0 chr4 6401080 6401103 -195927244 + (TTCA)n Simple_repeat Simple_repeat 2 24 0 269 311 78 50 chr4 6401719 6401899 -195926448 + MIR SINE MIR 7 191 -71 309 269 54 0 chr4 6402314 6402407 -195925940 + MIR SINE MIR 104 201 -61 6845 58 29 2 chr4 6402457 6403482 -195924865 + L1PA7 LINE L1 5106 6153 -1 556 273 109 16 chr4 6403492 6403869 -195924478 - LTR33 LTR ERVL -65 456 45 315 295 11 11 chr4 6403955 6404050 -195924297 - MIR3 SINE MIR -49 159 65 198 0 0 0 chr4 6404413 6404435 -195923912 + (TTCA)n Simple_repeat Simple_repeat 3 24 0 223 254 0 17 chr4 6404510 6404569 -195923778 - MIR SINE MIR -56 152 95 211 327 84 0 chr4 6404837 6404944 -195923403 - MIR SINE MIR -145 117 2 458 317 49 22 chr4 6405654 6405837 -195922510 + MIR SINE MIR 2 189 -73 197 330 152 35 chr4 6407902 6408320 -195920027 + L2 LINE L2 2738 3268 -45 599 233 7 0 chr4 6408320 6408470 -195919877 - L1 LINE L1 -1764 4382 4232 * 2220 145 0 3 chr4 6408469 6408849 -195919498 + L1PB3 LINE L1 5734 6112 -42 198 103 0 0 chr4 6408995 6409024 -195919323 + (CACCAT)n Simple_repeat Simple_repeat 4 32 0 655 116 0 101 chr4 6409035 6409234 -195919113 + (CACCAT)n Simple_repeat Simple_repeat 1 179 0 655 116 0 101 chr4 6409248 6409447 -195918900 + (CACCAT)n Simple_repeat Simple_repeat 1 179 0 340 97 32 0 chr4 6409459 6409521 -195918826 + (CACCAT)n Simple_repeat Simple_repeat 5 68 0 688 176 23 6 chr4 6409532 6409708 -195918639 + (CACCAT)n Simple_repeat Simple_repeat 1 179 0 208 107 0 0 chr4 6409708 6409736 -195918611 + (CAT)n Simple_repeat Simple_repeat 1 28 0 343 317 137 22 chr4 6410245 6410428 -195917919 - MIR SINE MIR -6 256 53 660 310 70 0 chr4 6410472 6410685 -195917662 + MIR SINE MIR 35 262 0 220 98 0 59 chr4 6411775 6411826 -195916521 + (TTCC)n Simple_repeat Simple_repeat 4 51 0 318 333 150 8 chr4 6412061 6412460 -195915887 + L2 LINE L2 2817 3272 0 672 365 73 0 chr4 6412520 6412876 -195915471 + L3 LINE CR1 767 1148 -429 620 324 14 19 chr4 6412889 6413102 -195915245 + MIR SINE MIR 8 219 -43 1408 141 94 7 chr4 6414317 6414594 -195913753 + THE1B LTR MaLR 1 301 -63 871 207 45 21 chr4 6415379 6415621 -195912726 - ORSL DNA AcHobo -20 255 8 279 365 116 5 chr4 6416695 6416884 -195911463 + MIR SINE MIR 28 237 -25 563 250 6 0 chr4 6418606 6419280 -195909067 + (CA)n Simple_repeat Simple_repeat 1 678 0 557 232 6 0 chr4 6419297 6419465 -195908882 + (CA)n Simple_repeat Simple_repeat 2 170 0 629 232 0 6 chr4 6419481 6419805 -195908542 + (CA)n Simple_repeat Simple_repeat 1 321 0 529 366 78 70 chr4 6420107 6420782 -195907565 - L1MC4a LINE L1 -1611 6197 5517 254 303 46 9 chr4 6421227 6421336 -195907011 - L2 LINE L2 -4 3268 3156 189 203 68 54 chr4 6421664 6421738 -195906609 - MER5A DNA MER1_type -89 100 26 204 195 0 0 chr4 6422752 6422793 -195905554 - MIR SINE MIR -113 149 109 285 344 45 45 chr4 6423331 6423488 -195904859 + MIR3 SINE MIR 35 191 -17 517 237 9 0 chr4 6423664 6423778 -195904569 - MER45A DNA AcHobo -2 176 62 2196 95 3 3 chr4 6425603 6425897 -195902450 - AluSq SINE Alu -19 294 1 254 211 18 0 chr4 6426716 6426773 -195901574 - L2 LINE L2 -211 3061 3004 1033 214 91 53 chr4 6427608 6427940 -195900407 + MLT1C LTR MaLR 2 360 -107 2244 102 0 0 chr4 6427940 6428235 -195900112 - AluSc SINE Alu -14 295 1 1033 214 91 53 chr4 6428235 6428348 -195899999 + MLT1C LTR MaLR 360 467 0 341 341 24 2 chr4 6429551 6429689 -195898658 + MIR SINE MIR 11 143 -65 196 402 45 0 chr4 6429755 6429867 -195898480 + L2 LINE L2 3181 3297 -16 424 220 10 0 chr4 6429872 6429972 -195898375 + L1MB3 LINE L1 5639 5739 -432 2204 85 10 0 chr4 6429972 6430266 -195898081 + AluSg SINE Alu 1 297 -13 1419 182 18 74 chr4 6430268 6430471 -195897876 + L1MB3 LINE L1 5823 5997 -186 2177 86 0 0 chr4 6430471 6430761 -195897586 - AluSx SINE Alu -22 290 1 1419 182 18 74 chr4 6430761 6430937 -195897410 + L1MB3 LINE L1 5997 6181 -2 202 256 56 44 chr4 6431286 6431376 -195896971 - MIR SINE MIR -159 103 13 2053 200 57 36 chr4 6431471 6431730 -195896617 + MER66B LTR ERV1 1 276 -210 1794 66 91 0 chr4 6431730 6431971 -195896376 + AluSg SINE Alu 1 263 -47 2053 200 57 36 chr4 6431971 6432185 -195896162 + MER66B LTR ERV1 276 484 -2 256 263 113 45 chr4 6432338 6432471 -195895876 - MIR SINE MIR -70 192 51 345 272 103 0 chr4 6432830 6432966 -195895381 - MER31-int LTR ERV1 -1632 3304 3155 2251 100 0 3 chr4 6432971 6433280 -195895067 + AluSx SINE Alu 2 309 -3 485 288 115 9 chr4 6433305 6433531 -195894816 + LTR16C LTR ERVL 134 383 -108 659 247 12 12 chr4 6433735 6433905 -195894442 + LTR16C LTR ERVL 314 483 -8 357 324 29 7 chr4 6434034 6434170 -195894177 - MIR SINE MIR -110 152 14 209 116 0 23 chr4 6434183 6434226 -195894121 + (GGGA)n Simple_repeat Simple_repeat 2 43 0 203 79 26 0 chr4 6434753 6434791 -195893556 + (TTTTTG)n Simple_repeat Simple_repeat 2 40 0 238 121 35 35 chr4 6434810 6434868 -195893479 + GA-rich Low_complexity Low_complexity 1 58 0 428 331 95 63 chr4 6435311 6435658 -195892689 + L3 LINE CR1 1146 1503 -74 498 330 77 27 chr4 6435820 6436081 -195892266 + MLT1L LTR MaLR 101 374 -241 312 234 0 0 chr4 6437107 6437171 -195891176 - MIR SINE MIR -121 141 78 711 154 18 0 chr4 6437558 6437727 -195890620 + (TCCA)n Simple_repeat Simple_repeat 1 172 0 821 143 25 7 chr4 6437742 6438143 -195890204 + (TCCA)n Simple_repeat Simple_repeat 1 408 0 551 191 17 17 chr4 6438164 6438342 -195890005 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 697 151 30 0 chr4 6438357 6438523 -195889824 + (TCCA)n Simple_repeat Simple_repeat 2 172 0 272 349 84 44 chr4 6438669 6438944 -195889403 - L2 LINE L2 -173 3099 2814 271 282 104 37 chr4 6439979 6440117 -195888230 - MIR SINE MIR -59 149 13 377 82 0 87 chr4 6440688 6440872 -195887475 + (CACCT)n Simple_repeat Simple_repeat 3 170 0 1786 143 0 0 chr4 6440966 6441224 -195887123 - AluSx SINE Alu -11 301 44 2097 109 3 0 chr4 6441263 6441590 -195886757 + AluSx SINE Alu 1 328 0 2154 51 44 7 chr4 6441624 6441933 -195886414 + AluY SINE Alu 1 319 0 1722 144 38 17 chr4 6442705 6442996 -195885351 + AluJo SINE Alu 1 297 -15 182 37 37 0 chr4 6443041 6443068 -195885279 + (TAAA)n Simple_repeat Simple_repeat 4 31 0 1648 177 7 7 chr4 6443068 6443367 -195884980 + AluJo SINE Alu 2 300 -12 199 305 63 21 chr4 6443402 6443497 -195884850 + L2 LINE L2 3003 3101 -212 271 303 110 0 chr4 6443580 6443735 -195884612 + L3 LINE CR1 1295 1466 -111 1576 180 68 22 chr4 6443757 6444043 -195884304 - MLT1B LTR MaLR -17 373 66 1133 106 0 150 chr4 6444043 6444270 -195884077 + 7SK RNA RNA 1 193 0 1576 180 68 22 chr4 6444270 6444338 -195884009 - MLT1B LTR MaLR -324 66 3 195 281 42 10 chr4 6444438 6444534 -195883813 + MIR SINE MIR 33 131 -77 329 298 168 8 chr4 6444933 6445064 -195883283 - L1ME4a LINE L1 -17 6104 5953 275 315 120 0 chr4 6445424 6445532 -195882815 - L2 LINE L2 -8 3264 3144 2468 123 31 14 chr4 6446074 6446432 -195881915 - THE1B LTR MaLR 0 364 1 180 0 0 0 chr4 6446434 6446454 -195881893 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 234 0 0 0 chr4 6447082 6447108 -195881239 + (TTCA)n Simple_repeat Simple_repeat 2 27 0 326 200 124 57 chr4 6447128 6447233 -195881114 - L2 LINE L2 -28 3285 3174 367 345 79 0 chr4 6448106 6448271 -195880076 - MIR SINE MIR -37 225 48 242 73 24 0 chr4 6448465 6448506 -195879841 + (CA)n Simple_repeat Simple_repeat 1 42 0 2068 110 7 3 chr4 6449419 6449711 -195878636 - AluSq SINE Alu -20 293 1 1813 164 0 22 chr4 6449720 6450032 -195878315 - AluJb SINE Alu -7 305 1 1982 85 48 4 chr4 6450236 6450532 -195877815 + AluSq SINE Alu 1 308 0 2198 109 0 0 chr4 6451109 6451402 -195876945 + AluSx SINE Alu 1 293 -19 295 253 87 105 chr4 6451609 6451886 -195876461 - L2 LINE L2 -188 3084 2813 258 132 0 73 chr4 6452922 6452990 -195875357 + (CGGGG)n Simple_repeat Simple_repeat 1 63 0 287 243 27 63 chr4 6453144 6453255 -195875092 - L2 LINE L2 -14 3258 3152 228 282 29 68 chr4 6453222 6453325 -195875022 + MIR3 SINE MIR 58 156 -52 * 2260 126 7 0 chr4 6453573 6453883 -195874464 - AluSx SINE Alu 0 312 1 207 125 0 0 chr4 6454711 6454751 -195873596 + (CCCA)n Simple_repeat Simple_repeat 2 41 0 3904 194 48 20 chr4 6454883 6455072 -195873275 + L1MB7 LINE L1 5004 5186 -998 2072 154 0 6 chr4 6455072 6455384 -195872963 + AluJb SINE Alu 1 310 -2 3904 194 48 20 chr4 6455384 6455854 -195872493 + L1MB7 LINE L1 5186 5641 -543 2395 107 0 0 chr4 6455854 6456164 -195872183 + AluSg SINE Alu 1 310 0 3904 194 48 20 chr4 6456164 6456652 -195871695 + L1MB7 LINE L1 5641 6183 -1 2355 97 7 0 chr4 6456655 6456944 -195871403 - AluSx SINE Alu -21 291 1 2247 107 13 0 chr4 6456952 6457250 -195871097 - AluSq SINE Alu -11 302 1 630 246 75 0 chr4 6457265 6457545 -195870802 + L1M4 LINE L1 3030 3330 -2816 547 231 31 0 chr4 6458024 6458154 -195870193 + MLT1C-int LTR MaLR 1238 1371 0 765 199 65 15 chr4 6458154 6458355 -195869992 + MLT1C LTR MaLR 1 211 -256 2353 175 29 13 chr4 6458383 6458839 -195869508 - MLT1C LTR MaLR 0 467 5 2791 194 9 5 chr4 6459129 6459685 -195868662 - L1MB3 LINE L1 0 6183 5626 231 217 0 0 chr4 6460202 6460262 -195868085 + (CA)n Simple_repeat Simple_repeat 1 60 0 2426 89 3 19 chr4 6460943 6461257 -195867090 - AluSq SINE Alu -4 309 1 308 159 0 43 chr4 6462026 6462095 -195866252 - MLT1F1 LTR MaLR 0 567 502 455 310 108 8 chr4 6462095 6462480 -195865867 - L1MB3 LINE L1 -657 5507 5083 410 119 0 0 chr4 6462482 6462541 -195865806 + AluS SINE Alu 2 60 -251 1411 139 5 14 chr4 6462584 6462799 -195865548 + AluSg/x SINE Alu 68 280 -32 1021 104 6 6 chr4 6462801 6462964 -195865383 + (GAAA)n Simple_repeat Simple_repeat 2 164 0 479 309 14 34 chr4 6462964 6463171 -195865176 - L1MB3 LINE L1 -1059 5087 4885 236 307 61 18 chr4 6463297 6463460 -195864887 + L1MC/D LINE L1 5720 5889 -1919 2382 101 3 0 chr4 6463462 6463770 -195864577 + AluSq SINE Alu 1 309 -4 2156 98 7 18 chr4 6463772 6464106 -195864241 + AluSq SINE Alu 1 331 0 376 255 35 41 chr4 6464491 6464636 -195863711 - L1ME4a LINE L1 -12 6109 5966 3829 80 51 0 chr4 6464783 6465310 -195863037 + MER41A LTR ERV1 1 554 0 267 119 24 0 chr4 6465310 6465352 -195862995 + MER41A-int LTR ERV1 1 43 -5903 1924 111 95 47 chr4 6465395 6465858 -195862489 + MER41A-int LTR ERV1 1 310 -5642 7553 141 202 32 chr4 6465879 6467494 -195860853 + MER41A-int LTR ERV1 129 2017 -3929 334 59 59 0 chr4 6467490 6467541 -195860806 + MER41A-int LTR ERV1 2167 2220 -3726 * 3128 128 55 43 chr4 6467537 6467944 -195860403 + MER41A-int LTR ERV1 3355 3755 -4061 2288 112 0 3 chr4 6467944 6468239 -195860108 + AluSg SINE Alu 1 294 -16 3128 128 55 43 chr4 6468239 6468342 -195860005 + MER41A-int LTR ERV1 3755 3855 -3961 2202 126 7 0 chr4 6468342 6468643 -195859704 + AluSq SINE Alu 1 303 -10 3128 128 55 43 chr4 6468643 6468671 -195859676 + MER41A-int LTR ERV1 3855 3881 -3935 2195 122 0 7 chr4 6468671 6468967 -195859380 + AluSx SINE Alu 1 294 -18 3128 128 55 43 chr4 6468967 6469348 -195858999 + MER41A-int LTR ERV1 3881 4417 -3399 11453 85 32 26 chr4 6469382 6470006 -195858341 + MER41A-int LTR ERV1 4191 4810 -1136 1978 167 0 0 chr4 6470006 6470300 -195858047 + AluSx SINE Alu 1 294 -18 11453 85 32 26 chr4 6470300 6471419 -195856928 + MER41A-int LTR ERV1 4810 5944 -2 3792 85 43 0 chr4 6471419 6471950 -195856397 + MER41A LTR ERV1 1 554 0 948 108 6 78 chr4 6472386 6472553 -195855794 + FRAM SINE Alu 1 40 0 815 223 54 0 chr4 6472578 6472762 -195855585 + MER58A DNA MER1_type 3 196 -28 353 274 152 22 chr4 6472976 6473246 -195855101 + LTR16A LTR ERVL 146 450 0 533 300 15 45 chr4 6473269 6473536 -195854811 - L2 LINE L2 -528 2786 2528 2229 95 3 0 chr4 6473627 6473977 -195854370 + AluSx SINE Alu 1 351 0 1229 214 137 51 chr4 6474187 6474677 -195853670 - LTR55 LTR ERV -16 532 1 371 321 70 12 chr4 6474678 6475021 -195853326 + L1 LINE L1 4288 4650 -1496 261 169 31 31 chr4 6475100 6475165 -195853182 + L1ME LINE L1 5714 5778 -343 860 172 0 0 chr4 6475192 6475326 -195853021 + AluJ SINE Alu 3 136 -176 6529 86 1 2 chr4 6475333 6477142 -195851205 + L1PA10 LINE L1 4352 6168 0 195 184 0 0 chr4 6477210 6477248 -195851099 + A-rich Low_complexity Low_complexity 1 38 0 2035 124 3 23 chr4 6477252 6477558 -195850789 + AluSg SINE Alu 1 300 -10 1996 125 45 14 chr4 6477560 6477847 -195850500 + AluSx SINE Alu 1 296 -16 28 29 0 0 chr4 6477847 6477882 -195850465 + AT_rich Low_complexity Low_complexity 1 35 0 1195 160 0 5 chr4 6477882 6478070 -195850277 + AluJ SINE Alu 117 303 -9 225 302 62 10 chr4 6479495 6479591 -195848756 - MLT1K LTR MaLR -346 242 142 205 196 0 22 chr4 6479819 6479865 -195848482 + (CCA)n Simple_repeat Simple_repeat 1 45 0 210 329 31 12 chr4 6480143 6480304 -195848043 + (CAGGG)n Simple_repeat Simple_repeat 5 168 0 1655 114 144 0 chr4 6481060 6481324 -195847023 + AluSx SINE Alu 1 302 0 999 237 58 34 chr4 6481832 6482242 -195846105 + MLT1D LTR MaLR 35 493 -12 284 262 58 29 chr4 6482300 6482403 -195845944 + MIR SINE MIR 47 152 -110 923 218 196 25 chr4 6482556 6482955 -195845392 + MLT1J LTR MaLR 13 479 -32 234 219 0 47 chr4 6484293 6484357 -195843990 + MIR SINE MIR 136 196 -66 1183 266 104 42 chr4 6484358 6484840 -195843507 - MLT1E3 LTR MaLR -112 512 1 2229 74 0 40 chr4 6485841 6486173 -195842174 - AluSx SINE Alu 0 320 1 2061 136 3 3 chr4 6486201 6486509 -195841838 + AluSx SINE Alu 1 308 -4 365 271 83 43 chr4 6486520 6486940 -195841407 - L1MC5 LINE L1 -50 7911 7475 26 64 0 0 chr4 6488070 6488117 -195840230 + GC_rich Low_complexity Low_complexity 1 47 0 272 253 154 19 chr4 6489994 6490225 -195838122 - L1MC5 LINE L1 -421 5821 5674 2019 55 0 19 chr4 6490332 6490589 -195837758 + AluY SINE Alu 45 296 -15 2264 89 3 20 chr4 6490900 6491204 -195837143 - AluSp SINE Alu -5 308 10 874 176 20 7 chr4 6491489 6491637 -195836710 + FRAM SINE Alu 3 152 -24 1641 137 129 0 chr4 6491647 6491910 -195836437 + AluSx SINE Alu 1 297 -15 213 108 0 0 chr4 6491921 6491958 -195836389 + (TAGA)n Simple_repeat Simple_repeat 4 40 0 1884 156 31 0 chr4 6493060 6493349 -195834998 + AluJb SINE Alu 1 298 -14 2420 64 0 17 chr4 6493634 6493929 -195834418 + AluY SINE Alu 1 290 -21 237 33 0 0 chr4 6493930 6493960 -195834387 + (TA)n Simple_repeat Simple_repeat 2 31 0 195 306 124 16 chr4 6494442 6494563 -195833784 - MIR SINE MIR -116 146 13 450 332 142 0 chr4 6494705 6495000 -195833347 + L2 LINE L2 1996 2332 -982 1202 243 57 33 chr4 6495238 6495327 -195833020 - L1MC5 LINE L1 -784 5362 5277 180 0 0 0 chr4 6495327 6495347 -195833000 + (TA)n Simple_repeat Simple_repeat 1 20 0 2375 102 3 13 chr4 6495349 6495663 -195832684 - AluSx SINE Alu -1 311 1 1202 243 57 33 chr4 6495663 6495980 -195832367 - L1MC5 LINE L1 -869 5277 4938 774 32 0 0 chr4 6495980 6496073 -195832274 + (TTTC)n Simple_repeat Simple_repeat 3 95 0 1202 243 57 33 chr4 6496073 6496119 -195832228 - L1MC5 LINE L1 -1208 4938 4895 348 183 175 8 chr4 6497767 6497887 -195830460 + MIR SINE MIR 92 231 -31 332 245 71 65 chr4 6498082 6498166 -195830181 - L1ME4a LINE L1 -1 6120 6038 2339 114 0 0 chr4 6498166 6498473 -195829874 + AluSx SINE Alu 1 307 -5 332 245 71 65 chr4 6498473 6498572 -195829775 - L1ME4a LINE L1 -83 6038 5936 2181 111 43 25 chr4 6500185 6500553 -195827794 - THE1C LTR MaLR 0 375 1 231 289 144 0 chr4 6501445 6501535 -195826812 - MIR SINE MIR -80 182 80 318 209 118 18 chr4 6502568 6502678 -195825669 - MER113 DNA MER1_type? -302 219 99 2348 86 7 0 chr4 6502679 6502969 -195825378 + AluSg SINE Alu 6 297 -13 200 360 27 36 chr4 6503827 6503938 -195824409 + MIR SINE MIR 35 144 -118 282 301 109 65 chr4 6504611 6505013 -195823334 + L2 LINE L2 2810 3229 -43 216 192 19 39 chr4 6505109 6505161 -195823186 - L2 LINE L2 -14 3258 3208 250 286 134 9 chr4 6505411 6505523 -195822824 - MER96 DNA MER1_type? -39 136 11 189 299 41 62 chr4 6506058 6506155 -195822192 + MIR3 SINE MIR 88 182 -26 316 309 158 29 chr4 6506627 6506829 -195821518 - MIR SINE MIR -43 219 3 196 231 0 0 chr4 6507523 6507562 -195820785 + L2 LINE L2 3263 3301 -12 222 362 51 22 chr4 6507670 6507808 -195820539 + MIR3 SINE MIR 5 146 -62 334 220 66 0 chr4 6507879 6507970 -195820377 + MER5A DNA MER1_type 10 106 -83 187 267 287 0 chr4 6507904 6508005 -195820342 - MER5A DNA MER1_type -24 165 36 * 190 332 72 9 chr4 6508410 6508633 -195819714 + L2 LINE L2 2738 2974 -340 211 336 60 0 chr4 6508670 6508786 -195819561 + L2 LINE L2 3141 3263 -9 182 331 83 53 chr4 6508815 6508984 -195819363 + MIR SINE MIR 45 218 -44 1583 202 80 36 chr4 6509292 6509707 -195818640 + MLT1D LTR MaLR 1 433 -72 532 216 16 0 chr4 6509712 6509837 -195818510 - MER47A DNA MER2_type 0 366 240 530 232 0 0 chr4 6509838 6509950 -195818397 - MER47A DNA MER2_type -254 112 1 351 203 0 0 chr4 6509950 6510019 -195818328 + MLT1D LTR MaLR 437 505 0 417 290 36 67 chr4 6511154 6511311 -195817036 + MIR SINE MIR 45 208 -54 2120 114 0 31 chr4 6511311 6511628 -195816719 + AluSx SINE Alu 1 307 -5 417 290 36 67 chr4 6511628 6511664 -195816683 + MIR SINE MIR 208 244 -18 743 263 91 45 chr4 6512135 6512531 -195815816 + MLT1C LTR MaLR 54 467 0 220 246 87 43 chr4 6513538 6513676 -195814671 + L2 LINE L2 2921 3064 -208 205 378 64 13 chr4 6513886 6514042 -195814305 - L3 LINE CR1 -7 1570 1407 254 284 28 57 chr4 6514468 6514609 -195813738 - MIR SINE MIR -90 172 36 944 135 12 0 chr4 6514720 6514890 -195813457 + (TTCA)n Simple_repeat Simple_repeat 2 173 0 321 274 186 0 chr4 6514901 6515003 -195813344 - L2 LINE L2 -15 3257 3137 220 271 82 16 chr4 6515076 6515198 -195813149 - L2 LINE L2 -1469 1845 1716 * 233 241 0 0 chr4 6515192 6515246 -195813101 + L2 LINE L2 3218 3271 -1 201 262 153 38 chr4 6515540 6515723 -195812624 - L2 LINE L2 -411 2903 2700 372 324 33 2 chr4 6516057 6516262 -195812085 + MIR3 SINE MIR 1 259 -3 308 280 136 8 chr4 6516391 6516516 -195811831 - MIR3 SINE MIR -32 176 36 730 254 149 11 chr4 6516522 6516797 -195811550 - MLT1C LTR MaLR -21 446 134 2289 95 0 0 chr4 6516831 6517127 -195811220 - AluSq SINE Alu -17 296 1 337 273 97 48 chr4 6518349 6518514 -195809833 - MIR3 SINE MIR -22 186 14 575 232 53 0 chr4 6520169 6520320 -195808027 - MLT1B LTR MaLR 0 390 232 235 200 0 0 chr4 6520340 6520385 -195807962 + G-rich Low_complexity Low_complexity 1 45 0 206 23 93 0 chr4 6520386 6520429 -195807918 + GA-rich Low_complexity Low_complexity 2 48 0 483 226 82 7 chr4 6520430 6520576 -195807771 - MLT1B LTR MaLR -205 185 29 196 178 22 0 chr4 6520659 6520704 -195807643 + L2 LINE L2 3014 3059 -213 391 296 254 0 chr4 6520998 6521278 -195807069 + L2 LINE L2 2912 3262 -10 188 268 36 0 chr4 6521291 6521347 -195807000 + L2 LINE L2 3207 3264 -8 289 357 56 16 chr4 6522328 6522454 -195805893 - MIR3 SINE MIR -63 145 15 210 310 17 0 chr4 6522462 6522520 -195805827 + (TG)n Simple_repeat Simple_repeat 2 60 0 237 33 0 0 chr4 6522585 6522615 -195805732 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 323 328 156 25 chr4 6522627 6523119 -195805228 - L2 LINE L2 -25 3247 2682 183 325 12 62 chr4 6523584 6523664 -195804683 - MIR SINE MIR -123 139 64 2418 66 0 3 chr4 6524816 6525117 -195803230 + AluY SINE Alu 1 300 -11 386 139 14 0 chr4 6526437 6526509 -195801838 + CT-rich Low_complexity Low_complexity 3 75 0 320 319 21 42 chr4 6528163 6528228 -195800119 - MIR SINE MIR -4 258 193 192 40 0 0 chr4 6528228 6528253 -195800094 + (TTCA)n Simple_repeat Simple_repeat 3 27 0 320 319 21 42 chr4 6528253 6528331 -195800016 - MIR SINE MIR -69 193 118 789 185 13 0 chr4 6528331 6528488 -195799859 + L1MC/D LINE L1 5476 5634 -699 391 275 64 0 chr4 6530946 6531055 -195797292 + MIR SINE MIR 47 162 -100 180 336 96 0 chr4 6531935 6532039 -195796308 - L2 LINE L2 -177 3095 2982 2634 141 62 2 chr4 6534338 6534741 -195793606 + MSTA LTR MaLR 2 428 0 308 250 0 33 chr4 6536610 6536702 -195791645 + HsTC2 DNA Tc2 1 89 -1809 880 317 110 23 chr4 6537319 6537950 -195790397 - L2 LINE L2 -3 3310 2613 2050 126 0 3 chr4 6538884 6539178 -195789169 + AluSx SINE Alu 5 297 -15 1352 198 38 108 chr4 6539196 6539696 -195788651 - MLT1C LTR MaLR -2 465 1 310 331 128 12 chr4 6540341 6540513 -195787834 + MIR SINE MIR 25 216 -46 196 275 12 62 chr4 6540637 6540717 -195787630 - MIR3 SINE MIR -6 202 127 377 258 129 12 chr4 6540898 6541061 -195787286 - L2 LINE L2 -257 3056 2875 931 71 20 45 chr4 6541571 6541894 -195786453 + (TGGA)n Simple_repeat Simple_repeat 1 315 0 297 51 0 0 chr4 6541906 6541945 -195786402 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 224 297 203 7 chr4 6541989 6542127 -195786220 - MIR3 SINE MIR -41 167 3 22 56 0 0 chr4 6542192 6542228 -195786119 + AT_rich Low_complexity Low_complexity 1 36 0 1410 189 79 16 chr4 6542895 6543261 -195785086 - MLT1C LTR MaLR -76 391 3 214 316 13 13 chr4 6543445 6543524 -195784823 - MIR SINE MIR -117 145 67 332 298 0 10 chr4 6543621 6543725 -195784622 - MIR SINE MIR -61 147 45 283 241 60 0 chr4 6543821 6543904 -195784443 + MER81 DNA DNA 27 114 0 372 298 128 30 chr4 6544737 6544972 -195783375 + L2 LINE L2 2906 3163 -109 2261 206 27 2 chr4 6545190 6545628 -195782719 - L1MB5 LINE L1 -8 6166 5718 190 227 68 0 chr4 6545653 6545697 -195782650 - L2 LINE L2 -23 3290 3244 238 264 35 0 chr4 6545798 6545885 -195782462 + MER45 DNA AcHobo 26 115 -1466 309 357 8 16 chr4 6546782 6546911 -195781436 + MIR SINE MIR 17 144 -118 316 248 204 0 chr4 6547065 6547178 -195781169 + MIR SINE MIR 8 143 -119 180 359 39 10 chr4 6548859 6548962 -195779385 - MIR3 SINE MIR -6 202 97 194 283 19 0 chr4 6549080 6549133 -195779214 + MIR SINE MIR 90 143 -65 3144 222 34 4 chr4 6549437 6550262 -195778085 - L1M4 LINE L1 -2885 3261 2412 303 311 0 49 chr4 6550391 6550513 -195777834 + L2 LINE L2 3197 3312 -1 26 30 0 0 chr4 6550532 6550565 -195777782 + AT_rich Low_complexity Low_complexity 1 33 0 604 304 68 27 chr4 6550904 6551124 -195777223 - MIR SINE MIR -21 241 13 461 296 39 82 chr4 6551824 6552030 -195776317 - MIR SINE MIR 0 262 66 2168 113 0 3 chr4 6552036 6552346 -195776001 - AluSq SINE Alu -4 309 1 204 178 0 44 chr4 6555123 6555168 -195773179 + CT-rich Low_complexity Low_complexity 3 45 0 623 225 21 0 chr4 6555169 6555449 -195772898 + (TCCA)n Simple_repeat Simple_repeat 1 285 0 208 231 26 0 chr4 6555468 6555546 -195772801 + (TCCA)n Simple_repeat Simple_repeat 1 80 0 314 279 81 62 chr4 6555659 6555820 -195772527 + L2 LINE L2 3109 3272 0 274 303 107 0 chr4 6555826 6555948 -195772399 - MIR3 SINE MIR -45 163 29 201 265 118 0 chr4 6556434 6556502 -195771845 - MIR3 SINE MIR -41 167 92 238 273 0 0 chr4 6556999 6557054 -195771293 + L2 LINE L2 3208 3262 -10 215 299 51 26 chr4 6557954 6558071 -195770276 + MIR SINE MIR 17 136 -72 186 43 0 0 chr4 6558191 6558214 -195770133 + (GA)n Simple_repeat Simple_repeat 1 23 0 544 278 44 15 chr4 6558870 6559075 -195769272 - MLT1J2 LTR MaLR 0 450 240 553 280 113 27 chr4 6559440 6559769 -195768578 + L2 LINE L2 2828 3184 -129 1103 193 44 139 chr4 6559780 6560189 -195768158 - MLT1A2 LTR MaLR -4 370 1 347 287 130 0 chr4 6560202 6560310 -195768037 + L2 LINE L2 3191 3312 -1 397 278 98 40 chr4 6561740 6561913 -195766434 - MIR SINE MIR -12 250 68 318 257 119 9 chr4 6562190 6562299 -195766048 - L1M4 LINE L1 -3353 2793 2673 1552 204 40 3 chr4 6562322 6562514 -195765833 - AluJo SINE Alu -2 310 102 2030 134 23 7 chr4 6562514 6562821 -195765526 + AluSx SINE Alu 1 312 0 1552 204 40 3 chr4 6562821 6562927 -195765420 - AluJo SINE Alu -210 102 1 504 328 25 20 chr4 6563630 6563892 -195764455 - MIR SINE MIR 0 262 2 2035 105 0 20 chr4 6564062 6564356 -195763991 - AluJb SINE Alu -2 310 23 394 220 0 36 chr4 6564894 6565062 -195763285 + CT-rich Low_complexity Low_complexity 1 162 0 294 377 16 0 chr4 6566419 6566541 -195761806 + MIR SINE MIR 75 198 -64 205 313 47 0 chr4 6567515 6567579 -195760768 + L3 LINE CR1 1263 1329 -248 771 281 51 23 chr4 6567659 6568054 -195760293 + MER115 DNA AcHobo 29 434 -259 529 279 8 0 chr4 6570361 6570490 -195757857 - MIR SINE MIR -39 223 94 517 273 16 0 chr4 6571031 6571159 -195757188 - L2 LINE L2 -1 3271 3142 247 79 26 0 chr4 6572154 6572192 -195756155 + L2 LINE L2 2745 2783 -531 964 281 72 36 chr4 6572202 6572593 -195755754 + L2 LINE L2 2887 3291 -22 270 116 0 0 chr4 6572595 6572638 -195755709 + (TG)n Simple_repeat Simple_repeat 2 44 0 304 295 76 19 chr4 6573757 6573862 -195754485 - MIR SINE MIR -29 233 123 380 198 25 136 chr4 6573896 6574058 -195754289 - L2 LINE L2 0 3313 3170 220 263 18 0 chr4 6574157 6574214 -195754133 + CT-rich Low_complexity Low_complexity 4 61 0 2390 66 3 0 chr4 6574854 6575156 -195753191 - AluY SINE Alu -8 303 1 295 140 0 53 chr4 6577274 6577331 -195751016 - MIR SINE MIR -61 147 94 312 256 17 0 chr4 6577582 6577754 -195750593 + (TG)n Simple_repeat Simple_repeat 1 175 0 323 350 50 7 chr4 6579000 6579147 -195749200 - MIR SINE MIR -61 147 14 586 223 0 0 chr4 6580036 6580157 -195748190 - MIR SINE MIR -62 200 80 2293 262 48 39 chr4 6580747 6581691 -195746656 - L1ME1 LINE L1 -4 6162 5201 2161 123 0 3 chr4 6581691 6582000 -195746347 - AluSc SINE Alu -1 308 1 2293 262 48 39 chr4 6582000 6582120 -195746227 - L1ME1 LINE L1 -965 5201 5084 233 299 188 17 chr4 6583104 6583221 -195745126 - L2 LINE L2 0 3272 3136 255 360 72 0 chr4 6583492 6583631 -195744716 + L2 LINE L2 2608 2756 -558 2342 87 0 0 chr4 6584153 6584464 -195743883 - AluY SINE Alu 0 311 1 2042 90 34 65 chr4 6584635 6584958 -195743389 - AluSq SINE Alu 0 313 1 195 304 0 0 chr4 6585149 6585195 -195743152 + MIR SINE MIR 217 262 0 205 303 130 34 chr4 6585404 6585642 -195742705 + L2 LINE L2 2908 3168 -104 877 157 6 9 chr4 6585746 6586086 -195742261 + (TCCA)n Simple_repeat Simple_repeat 1 338 0 204 296 0 102 chr4 6586109 6586207 -195742140 - L2 LINE L2 0 3272 3185 206 298 0 0 chr4 6586364 6586411 -195741936 + MIR SINE MIR 74 120 -142 317 154 0 0 chr4 6587732 6587784 -195740563 + MLT1L LTR MaLR 22 73 -394 536 304 85 27 chr4 6587911 6588135 -195740212 - MIR SINE MIR -4 258 22 317 273 219 11 chr4 6588292 6588475 -195739872 + MIR SINE MIR 21 241 -21 1783 236 31 5 chr4 6588555 6589000 -195739347 - L1ME1 LINE L1 -5 6161 5705 608 210 105 6 chr4 6588993 6589174 -195739173 - L1MCc LINE L1 -5058 1365 1167 * 1758 176 0 29 chr4 6589248 6589554 -195738793 + AluJo SINE Alu 1 297 -15 829 161 0 0 chr4 6589846 6589983 -195738364 + AluJo SINE Alu 1 137 -175 498 330 77 27 chr4 6590776 6591037 -195737310 + MLT1L LTR MaLR 101 374 -241 312 234 0 0 chr4 6592063 6592127 -195736220 - MIR SINE MIR -121 141 78 196 158 35 0 chr4 6592516 6592573 -195735774 + (TCCA)n Simple_repeat Simple_repeat 4 62 0 667 151 22 17 chr4 6592588 6592767 -195735580 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 374 230 23 0 chr4 6592788 6592962 -195735385 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 244 301 11 0 chr4 6592975 6593068 -195735279 + (TCCA)n Simple_repeat Simple_repeat 1 94 0 529 312 47 58 chr4 6593655 6593998 -195734349 + L2 LINE L2 2932 3270 -2 2086 117 10 0 chr4 6595263 6595553 -195732794 + AluSx SINE Alu 1 293 -19 555 205 18 0 chr4 6595742 6595854 -195732493 - MER81 DNA DNA 0 114 1 195 194 113 32 chr4 6597226 6597288 -195731059 + MIR SINE MIR 34 100 -108 447 332 154 14 chr4 6597726 6598296 -195730051 + L1ME4a LINE L1 5347 5996 -125 2130 116 0 25 chr4 6598689 6599008 -195729339 - AluSx SINE Alu -1 311 1 308 363 137 0 chr4 6599849 6600039 -195728308 - MIR SINE MIR 0 262 47 396 302 171 19 chr4 6600688 6600882 -195727465 - MIR SINE MIR 0 262 34 2231 79 3 55 chr4 6600882 6601212 -195727135 - AluSq SINE Alu 0 313 1 210 154 0 0 chr4 6601880 6601919 -195726428 + A-rich Low_complexity Low_complexity 1 39 0 2048 132 3 16 chr4 6602037 6602347 -195726000 + AluSx SINE Alu 1 306 -6 237 65 0 0 chr4 6603571 6603602 -195724745 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 259 275 154 0 chr4 6604020 6604111 -195724236 + L2 LINE L2 3168 3272 0 197 343 14 0 chr4 6604111 6604181 -195724166 - MIR SINE MIR -129 133 63 180 380 80 20 chr4 6604373 6604523 -195723824 + MIR SINE MIR 77 235 -27 472 243 69 23 chr4 6604872 6605045 -195723302 + L1MB7 LINE L1 5943 6123 -61 250 254 34 68 chr4 6606863 6606981 -195721366 + L2 LINE L2 3158 3271 -1 618 236 23 23 chr4 6607311 6607485 -195720862 + MLT1H LTR MaLR 1 174 -375 585 176 17 17 chr4 6607600 6607719 -195720628 + MLT1H LTR MaLR 431 549 0 3574 139 13 8 chr4 6607883 6608482 -195719865 + LTR10E LTR ERV1 1 602 -31 659 245 13 0 chr4 6608656 6608811 -195719536 - MIR SINE MIR -95 167 11 868 234 92 77 chr4 6610629 6610954 -195717393 - MER102a DNA MER1_type 0 330 1 369 351 48 0 chr4 6611203 6611368 -195716979 + MIR SINE MIR 20 192 -70 290 333 25 44 chr4 6611422 6611626 -195716721 + L3 LINE CR1 1272 1471 -106 2115 103 17 0 chr4 6612537 6612828 -195715519 + AluSx SINE Alu 1 296 -16 213 319 138 11 chr4 6614892 6615080 -195713267 + MIR SINE MIR 36 247 -15 390 279 41 7 chr4 6615478 6615625 -195712722 - L2 LINE L2 0 3272 3121 405 291 159 28 chr4 6616150 6616470 -195711877 + L2 LINE L2 2259 2620 -694 542 284 157 25 chr4 6616510 6616904 -195711443 + L2 LINE L2 2804 3249 -64 1945 144 0 38 chr4 6618222 6618542 -195709805 - AluSx SINE Alu -4 308 1 1968 144 0 13 chr4 6619139 6619444 -195708903 + AluJb SINE Alu 1 301 -11 3087 102 61 5 chr4 6621604 6622044 -195706303 + MER4C LTR ERV1 1 465 0 1818 87 30 26 chr4 6622504 6622770 -195705577 + AluSx SINE Alu 36 302 -10 222 274 38 29 chr4 6623331 6623435 -195704912 - MIR SINE MIR -23 185 75 1233 141 34 43 chr4 6624204 6624392 -195703955 + MER2 DNA MER2_type 2 189 -156 1894 176 71 0 chr4 6624392 6624716 -195703631 + MER7A DNA MER2_type 1 345 -1 1233 141 34 43 chr4 6624716 6624761 -195703586 + MER2 DNA MER2_type 189 233 -112 705 119 0 0 chr4 6624765 6624866 -195703481 + AluSg/x SINE Alu 204 304 -6 665 167 0 18 chr4 6624866 6624980 -195703367 + MER2 DNA MER2_type 234 345 0 301 241 138 0 chr4 6625390 6625477 -195702870 - L2 LINE L2 -8 3264 3166 1892 119 10 42 chr4 6625568 6625879 -195702468 + AluSx SINE Alu 1 301 -11 1235 129 0 0 chr4 6625879 6626057 -195702290 + AluSg/x SINE Alu 134 311 -1 470 265 54 58 chr4 6626062 6626356 -195701991 + L1MC5 LINE L1 7238 7530 -431 1754 182 6 88 chr4 6626358 6626772 -195701575 + L1MB3 LINE L1 5744 6190 7 2252 99 0 7 chr4 6626772 6627074 -195701273 + AluSq SINE Alu 1 300 -13 1754 182 6 88 chr4 6627074 6627104 -195701243 + L1MB3 LINE L1 6190 6150 -33 383 67 34 157 chr4 6627104 6627193 -195701154 + MADE1 DNA Mariner 2 79 -1 1754 182 6 88 chr4 6627193 6627224 -195701123 + L1MB3 LINE L1 6149 6181 -2 441 251 23 69 chr4 6627224 6627399 -195700948 + L1MC5 LINE L1 7533 7699 -262 216 239 0 0 chr4 6628107 6628153 -195700194 + (CCG)n Simple_repeat Simple_repeat 2 47 0 568 195 86 29 chr4 6628231 6628405 -195699942 - MER96B DNA MER1_type? -233 184 1 804 249 66 8 chr4 6630072 6630313 -195698034 + MER112 DNA MER1_type 2 256 0 972 203 30 5 chr4 6630516 6630718 -195697629 - MIR SINE MIR -42 220 14 316 311 142 16 chr4 6631919 6632109 -195696238 - MIR SINE MIR -48 214 1 360 360 27 0 chr4 6632646 6632796 -195695551 + MIR SINE MIR 48 201 -61 1046 253 88 10 chr4 6633124 6633552 -195694795 + MLT1D LTR MaLR 3 505 0 2265 75 7 0 chr4 6633648 6633943 -195694404 - AluSp SINE Alu -16 297 1 282 268 10 21 chr4 6633943 6634040 -195694307 + MIR SINE MIR 167 262 0 213 275 43 0 chr4 6634323 6634392 -195693955 + MIR SINE MIR 101 172 -90 1822 168 29 9 chr4 6634782 6635128 -195693219 + MLT1B LTR MaLR 1 353 -37 846 147 8 0 chr4 6635133 6635262 -195693085 + MER6 DNA MER2_type 32 161 -704 765 273 84 12 chr4 6635278 6635600 -195692747 - MLT1D LTR MaLR -76 429 85 * 2067 115 81 56 chr4 6635579 6635909 -195692438 + MER6 DNA MER2_type 188 508 -357 2058 147 0 0 chr4 6635909 6636221 -195692126 + AluSx SINE Alu 1 312 0 2067 115 81 56 chr4 6636221 6636298 -195692049 + MER6 DNA MER2_type 508 865 0 714 269 145 31 chr4 6636762 6637040 -195691307 - LTR33A LTR ERVL -18 505 260 1411 281 36 25 chr4 6637040 6637478 -195690869 + LTR47B LTR ERVL 1 443 0 714 269 145 31 chr4 6637478 6637648 -195690699 - LTR33A LTR ERVL -263 260 6 449 322 39 30 chr4 6638578 6638777 -195689570 - MIR SINE MIR -54 208 9 2914 212 66 29 chr4 6639243 6639927 -195688420 + MER67C LTR ERV1 2 710 0 567 297 128 0 chr4 6640012 6640207 -195688140 + MIR SINE MIR 21 240 -22 284 333 0 0 chr4 6641662 6641743 -195686604 - MER81 DNA DNA -16 98 18 286 298 53 0 chr4 6644925 6645019 -195683328 - L2 LINE L2 -1 3312 3214 269 279 0 0 chr4 6645896 6645975 -195682372 + A-rich Low_complexity Low_complexity 1 79 0 1482 116 36 18 chr4 6646401 6646625 -195681722 - MER30 DNA MER1_type 0 230 3 425 313 55 0 chr4 6646979 6647107 -195681240 - MIR3 SINE MIR -6 202 68 220 277 189 14 chr4 6648227 6648375 -195679972 - L3 LINE CR1 -216 1361 1188 227 289 132 26 chr4 6648533 6648647 -195679700 - L2 LINE L2 -4 3268 3143 367 244 0 0 chr4 6648779 6648861 -195679486 + MIR SINE MIR 73 154 -108 628 314 51 8 chr4 6649488 6649743 -195678604 - L1ME3 LINE L1 -1 6161 5896 425 168 179 0 chr4 6649985 6650080 -195678267 - MER81 DNA DNA -1 113 2 694 257 38 16 chr4 6650429 6650612 -195677735 - MER5A DNA MER1_type 0 189 3 1910 103 57 0 chr4 6650793 6651075 -195677272 + AluSx SINE Alu 1 298 -14 290 181 14 14 chr4 6651137 6651209 -195677138 - L2 LINE L2 -277 2995 2924 195 270 79 0 chr4 6651292 6651355 -195676992 - L2 LINE L2 -556 2758 2691 347 288 183 0 chr4 6651412 6651565 -195676782 + MIR SINE MIR 79 259 -3 198 368 11 0 chr4 6651706 6651793 -195676554 + MIR SINE MIR 51 138 -124 478 238 13 64 chr4 6651994 6652180 -195676167 + MIR SINE MIR 5 181 -67 187 244 0 0 chr4 6652181 6652222 -195676125 - L2 LINE L2 -5 3267 3227 444 51 0 0 chr4 6652292 6652351 -195675996 + (CAAAA)n Simple_repeat Simple_repeat 4 62 0 538 304 134 5 chr4 6653114 6653331 -195675016 - MIR SINE MIR 0 262 18 738 278 52 0 chr4 6653837 6654031 -195674316 - MIR SINE MIR -51 211 8 1689 170 46 51 chr4 6654093 6654166 -195674181 + MLT2D LTR ERVL 3 75 -339 1926 129 4 0 chr4 6654166 6654466 -195673881 + AluSx SINE Alu 5 305 0 1689 170 46 51 chr4 6654466 6654785 -195673562 + MLT2D LTR ERVL 75 394 -20 531 249 103 12 chr4 6654852 6655017 -195673330 + MIR SINE MIR 73 252 -10 452 327 12 6 chr4 6660895 6661060 -195667287 - MIR3 SINE MIR -39 169 4 190 361 83 8 chr4 6661226 6661359 -195666988 - MIR SINE MIR -7 255 113 303 333 49 24 chr4 6661498 6661621 -195666726 + L2 LINE L2 3145 3270 -2 442 312 91 15 chr4 6662195 6662394 -195665953 - MIR SINE MIR -33 229 16 473 306 47 58 chr4 6663625 6663968 -195664379 + L2 LINE L2 2932 3270 -2 2057 117 10 0 chr4 6665233 6665523 -195662824 + AluSx SINE Alu 1 293 -19 547 205 18 0 chr4 6665712 6665824 -195662523 - MER81 DNA DNA 0 114 1 213 177 113 32 chr4 6667196 6667258 -195661089 + MIR SINE MIR 34 100 -108 498 337 150 13 chr4 6667654 6668266 -195660081 + L1ME4a LINE L1 5301 5996 -125 2098 110 0 25 chr4 6668659 6668978 -195659369 - AluSx SINE Alu -1 311 1 264 363 137 0 chr4 6669819 6670009 -195658338 - MIR SINE MIR 0 262 47 356 278 189 22 chr4 6670683 6670852 -195657495 - MIR SINE MIR -26 236 34 2207 79 3 55 chr4 6670852 6671182 -195657165 - AluSq SINE Alu 0 313 1 210 154 0 0 chr4 6671850 6671889 -195656458 + A-rich Low_complexity Low_complexity 1 39 0 2011 132 3 16 chr4 6672007 6672317 -195656030 + AluSx SINE Alu 1 306 -6 237 65 0 0 chr4 6673541 6673572 -195654775 + (GAAA)n Simple_repeat Simple_repeat 2 32 0 243 275 154 0 chr4 6673990 6674081 -195654266 + L2 LINE L2 3168 3272 0 183 343 14 0 chr4 6674081 6674151 -195654196 - MIR SINE MIR -129 133 63 472 243 69 23 chr4 6674842 6675015 -195653332 + L1MB7 LINE L1 5943 6123 -61 250 254 34 68 chr4 6676833 6676951 -195651396 + L2 LINE L2 3158 3271 -1 618 236 23 23 chr4 6677281 6677455 -195650892 + MLT1H LTR MaLR 1 174 -375 585 176 17 17 chr4 6677570 6677689 -195650658 + MLT1H LTR MaLR 431 549 0 3574 139 13 8 chr4 6677853 6678452 -195649895 + LTR10E LTR ERV1 1 602 -31 659 245 13 0 chr4 6678626 6678781 -195649566 - MIR SINE MIR -95 167 11 868 234 92 77 chr4 6680599 6680924 -195647423 - MER102a DNA MER1_type 0 330 1 369 351 48 0 chr4 6681173 6681338 -195647009 + MIR SINE MIR 20 192 -70 290 333 25 44 chr4 6681392 6681596 -195646751 + L3 LINE CR1 1272 1471 -106 2115 103 17 0 chr4 6682507 6682798 -195645549 + AluSx SINE Alu 1 296 -16 213 319 138 11 chr4 6684862 6685050 -195643297 + MIR SINE MIR 36 247 -15 390 279 41 7 chr4 6685448 6685595 -195642752 - L2 LINE L2 0 3272 3121 405 291 159 28 chr4 6686120 6686440 -195641907 + L2 LINE L2 2259 2620 -694 542 284 157 25 chr4 6686480 6686874 -195641473 + L2 LINE L2 2804 3249 -64 1945 144 0 38 chr4 6688192 6688512 -195639835 - AluSx SINE Alu -4 308 1 1968 144 0 13 chr4 6689109 6689414 -195638933 + AluJb SINE Alu 1 301 -11 3087 102 61 5 chr4 6691574 6692014 -195636333 + MER4C LTR ERV1 1 465 0 1818 87 30 26 chr4 6692474 6692740 -195635607 + AluSx SINE Alu 36 302 -10 222 274 38 29 chr4 6693301 6693405 -195634942 - MIR SINE MIR -23 185 75 1263 142 34 39 chr4 6694174 6694361 -195633986 + MER2 DNA MER2_type 2 189 -156 1894 176 71 0 chr4 6694361 6694685 -195633662 + MER7A DNA MER2_type 1 345 -1 1263 142 34 39 chr4 6694685 6694730 -195633617 + MER2 DNA MER2_type 189 233 -112 705 119 0 0 chr4 6694734 6694835 -195633512 + AluSg/x SINE Alu 204 304 -6 665 167 0 18 chr4 6694835 6694949 -195633398 + MER2 DNA MER2_type 234 345 0 301 241 138 0 chr4 6695359 6695446 -195632901 - L2 LINE L2 -8 3264 3166 2182 110 3 16 chr4 6695537 6695854 -195632493 + AluSq SINE Alu 1 313 0 237 333 86 17 chr4 6695951 6696125 -195632222 + MIR SINE MIR 7 192 -70 2172 116 36 39 chr4 6696296 6696658 -195631689 - MER46B DNA MER2_type 0 236 1 1979 198 50 24 chr4 6696729 6697116 -195631231 + MLT1C LTR MaLR 1 403 -64 1989 142 13 3 chr4 6697116 6697425 -195630922 - AluJo SINE Alu 0 312 1 1979 198 50 24 chr4 6697425 6697492 -195630855 + MLT1C LTR MaLR 403 467 0 380 220 122 114 chr4 6697572 6697755 -195630592 + Charlie8 DNA MER1_type 244 431 -1986 1585 116 0 0 chr4 6697755 6697979 -195630368 + AluSg/x SINE Alu 80 303 -7 380 220 122 114 chr4 6697979 6698040 -195630307 + Charlie8 DNA MER1_type 431 490 -1927 591 175 0 0 chr4 6698902 6699022 -195629325 + (TGGA)n Simple_repeat Simple_repeat 3 122 0 204 67 0 0 chr4 6699441 6699471 -195628876 + (CCAA)n Simple_repeat Simple_repeat 2 31 0 2085 128 60 31 chr4 6700084 6700437 -195627910 + THE1B LTR MaLR 1 363 -1 306 0 0 0 chr4 6700628 6700662 -195627685 + (CA)n Simple_repeat Simple_repeat 2 35 0 343 292 83 8 chr4 6700920 6701040 -195627307 - MIR SINE MIR -55 207 79 391 264 104 0 chr4 6701535 6701641 -195626706 + MIR SINE MIR 74 190 -72 1550 172 15 7 chr4 6702166 6702439 -195625908 - AluJb SINE Alu -27 285 11 563 271 21 23 chr4 6702439 6702630 -195625717 + L1MC4a LINE L1 5714 5819 -355 2302 93 0 0 chr4 6702769 6703069 -195625278 + AluSx SINE Alu 1 300 -12 2160 112 3 3 chr4 6703684 6703989 -195624358 + AluSp SINE Alu 1 305 -8 279 287 33 97 chr4 6704006 6704306 -195624041 - L1ME4a LINE L1 -205 5916 5636 252 0 0 0 chr4 6704615 6704643 -195623704 + (A)n Simple_repeat Simple_repeat 1 28 0 183 80 0 0 chr4 6704947 6704972 -195623375 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 328 324 155 16 chr4 6705600 6706161 -195622186 + L2 LINE L2 1762 2400 -914 1429 242 92 9 chr4 6706309 6706734 -195621613 + MLT1C LTR MaLR 8 467 0 358 327 39 54 chr4 6706892 6707097 -195621250 + MIR SINE MIR 51 252 -10 356 245 117 53 chr4 6707740 6707928 -195620419 - L2 LINE L2 -1 3312 3113 639 269 91 65 chr4 6708593 6708991 -195619356 + MLT1K LTR MaLR 169 576 -12 219 255 134 33 chr4 6709091 6709254 -195619093 - MIR3 SINE MIR -69 193 15 1344 206 73 42 chr4 6709433 6709606 -195618741 + MLT1C LTR MaLR 1 167 -300 2227 112 0 0 chr4 6709606 6709893 -195618454 + AluSx SINE Alu 19 305 -7 1344 206 73 42 chr4 6709893 6710170 -195618177 + MLT1C LTR MaLR 167 465 -2 375 276 83 47 chr4 6711100 6711292 -195617055 - MIR SINE MIR -58 204 6 222 365 47 31 chr4 6711498 6711690 -195616657 - L3 LINE CR1 -21 1556 1362 199 310 180 0 chr4 6712720 6712820 -195615527 + L2 LINE L2 2925 3042 -230 1921 149 40 7 chr4 6714359 6714661 -195613686 + AluJb SINE Alu 1 312 0 308 172 20 30 chr4 6714665 6714764 -195613583 + GA-rich Low_complexity Low_complexity 3 100 0 625 176 12 24 chr4 6714792 6714962 -195613385 + GA-rich Low_complexity Low_complexity 3 170 0 339 130 0 0 chr4 6714981 6715035 -195613312 + (GGAA)n Simple_repeat Simple_repeat 3 56 0 306 303 20 0 chr4 6715320 6715419 -195612928 - L1ME LINE L1 -430 5691 5591 579 286 83 43 chr4 6715435 6715784 -195612563 - L2 LINE L2 -26 3287 2925 278 330 95 5 chr4 6715856 6716056 -195612291 - L1ME LINE L1 -2336 5472 5255 2402 94 73 52 chr4 6716332 6716656 -195611691 - Tigger4(Zombi) DNA MER2_type 0 2731 2394 1585 204 18 0 chr4 6716656 6716940 -195611407 - AluJo SINE Alu -19 293 5 2402 94 73 52 chr4 6716940 6717042 -195611305 - Tigger4(Zombi) DNA MER2_type -337 2394 2296 1301 158 54 4 chr4 6717043 6717284 -195611063 - Tigger4(Zombi) DNA MER2_type -2477 254 2 2226 113 0 7 chr4 6717797 6718090 -195610257 + AluSq SINE Alu 2 292 -21 207 139 0 0 chr4 6718090 6718126 -195610221 + (GGGA)n Simple_repeat Simple_repeat 1 36 0 * 1121 95 17 20 chr4 6718120 6718416 -195609931 + (GAAA)n Simple_repeat Simple_repeat 1 296 0 698 260 65 29 chr4 6718433 6718710 -195609637 - L1ME3 LINE L1 -133 6098 5812 1092 289 68 50 chr4 6718762 6719516 -195608831 - L1ME3 LINE L1 -4064 2332 1566 297 241 23 0 chr4 6719541 6719628 -195608719 - L1ME LINE L1 -649 5590 5502 4806 261 82 29 chr4 6719770 6720887 -195607460 - L1MB7 LINE L1 -75 6109 5052 185 0 40 0 chr4 6720887 6720912 -195607435 + (TG)n Simple_repeat Simple_repeat 2 27 0 4806 261 82 29 chr4 6720912 6721232 -195607115 - L1MB7 LINE L1 -1132 5052 4750 2228 99 6 51 chr4 6721232 6721545 -195606802 + AluSx SINE Alu 1 299 -13 4806 261 82 29 chr4 6721545 6721906 -195606441 - L1MB7 LINE L1 -1434 4750 4409 1402 196 58 52 chr4 6721906 6722269 -195606078 + MLT1A1 LTR MaLR 1 365 0 4806 261 82 29 chr4 6722269 6722346 -195606001 - L1MB7 LINE L1 -1775 4409 4338 2299 70 0 0 chr4 6722346 6722618 -195605729 - AluY SINE Alu -1 310 39 185 0 40 0 chr4 6722624 6722649 -195605698 + (TTTTA)n Simple_repeat Simple_repeat 5 30 0 4806 261 82 29 chr4 6722649 6723758 -195604589 - L1MB7 LINE L1 -1850 4334 2957 1162 262 115 9 chr4 6723792 6724243 -195604104 - L1MB7 LINE L1 -3464 2682 2184 190 286 0 0 chr4 6724973 6725022 -195603325 + L2 LINE L2 3239 3287 -26 341 93 19 0 chr4 6726142 6726196 -195602151 + (TC)n Simple_repeat Simple_repeat 1 55 0 2140 156 9 69 chr4 6727003 6727438 -195600909 + MLT2D LTR ERVL 1 409 -5 223 297 22 22 chr4 6727441 6727532 -195600815 + MIR SINE MIR 106 196 -66 2482 173 34 30 chr4 6728303 6728750 -195599597 + L1MC3 LINE L1 6363 6814 -971 2478 73 0 3 chr4 6728750 6729051 -195599296 - AluY SINE Alu -4 307 8 2482 173 34 30 chr4 6729051 6729107 -195599240 + L1MC3 LINE L1 6814 6868 -917 1940 169 67 3 chr4 6729731 6730092 -195598255 + MLT1B LTR MaLR 7 390 0 220 274 38 28 chr4 6730092 6730198 -195598149 + MIR3 SINE MIR 91 197 -11 394 298 66 11 chr4 6730258 6730439 -195597908 - MIR SINE MIR -32 230 40 205 67 0 111 chr4 6730500 6730545 -195597802 + (CCCCAG)n Simple_repeat Simple_repeat 3 42 0 347 306 51 51 chr4 6731129 6731325 -195597022 - MIR SINE MIR -57 205 10 1135 118 0 12 chr4 6731539 6731708 -195596639 + MER4B LTR ERV1 3 169 -441 784 280 168 6 chr4 6731724 6732088 -195596259 + MER57B LTR ERV1 12 434 0 257 301 48 10 chr4 6732088 6732191 -195596156 - MIR SINE MIR -115 147 41 312 177 333 0 chr4 6732769 6732865 -195595482 - MER5A DNA MER1_type -22 167 40 277 295 69 29 chr4 6732949 6733122 -195595225 - MER5A DNA MER1_type -3 186 7 333 228 76 0 chr4 6733158 6733250 -195595097 - MIR SINE MIR -91 171 73 355 312 40 29 chr4 6733388 6733561 -195594786 + L2 LINE L2 3139 3313 0 440 344 36 0 chr4 6733581 6733773 -195594574 - MIR SINE MIR -10 252 54 300 327 156 4 chr4 6733765 6734028 -195594319 - L2 LINE L2 -1121 2193 1891 * 2162 111 33 13 chr4 6734752 6735058 -195593289 + AluSx SINE Alu 1 312 0 254 257 114 0 chr4 6735111 6735216 -195593131 - L2 LINE L2 -1 3271 3155 182 311 97 10 chr4 6736358 6736461 -195591886 - L2 LINE L2 -85 3228 3117 857 176 35 0 chr4 6736569 6736739 -195591608 - MER45A DNA AcHobo 0 178 3 8744 40 2 7 chr4 6736831 6737907 -195590440 - MER11C LTR ERVK 0 1071 1 753 287 163 23 chr4 6738415 6738858 -195589489 + MLT1D LTR MaLR 1 505 0 2343 82 6 19 chr4 6738887 6739204 -195589143 + AluSp SINE Alu 1 313 0 299 327 8 9 chr4 6739412 6739533 -195588814 - MIR SINE MIR -70 138 30 341 317 35 64 chr4 6739927 6740129 -195588218 + L1ME LINE L1 5592 5787 -334 206 330 32 0 chr4 6740446 6740540 -195587807 + MIR SINE MIR 154 250 -12 2331 109 3 0 chr4 6740546 6740848 -195587499 + AluSx SINE Alu 1 303 -9 236 175 0 0 chr4 6741099 6741139 -195587208 + L1ME4a LINE L1 5725 5764 -357 496 281 36 12 chr4 6741353 6741520 -195586827 - Charlie8 DNA MER1_type -2246 171 1 218 197 15 45 chr4 6741582 6741648 -195586699 + (TATATG)n Simple_repeat Simple_repeat 5 68 0 1954 127 67 0 chr4 6741693 6741976 -195586371 + AluSx SINE Alu 1 302 -10 939 251 8 16 chr4 6742398 6742641 -195585706 + MIR SINE MIR 21 261 -1 1806 170 3 13 chr4 6743169 6743475 -195584872 + AluJo SINE Alu 1 303 -9 208 293 0 0 chr4 6743680 6743738 -195584609 + MIR SINE MIR 19 76 -132 240 196 92 2 chr4 6744587 6744664 -195583683 - MIR SINE MIR -63 145 63 203 204 37 0 chr4 6745166 6745220 -195583127 + (CA)n Simple_repeat Simple_repeat 2 57 0 444 268 150 0 chr4 6746155 6746308 -195582039 + MER5B DNA MER1_type 3 178 0 192 294 88 0 chr4 6746377 6746479 -195581868 - MIR SINE MIR -65 143 33 242 337 47 0 chr4 6746542 6746628 -195581719 + L2 LINE L2 3143 3232 -40 2108 138 0 3 chr4 6748320 6748631 -195579716 + AluJb SINE Alu 1 310 -2 280 216 72 36 chr4 6748693 6748804 -195579543 - MIR3 SINE MIR -7 201 87 2357 79 3 25 chr4 6750085 6750400 -195577947 + AluY SINE Alu 1 308 -3 1961 157 3 0 chr4 6750541 6750841 -195577506 - AluJo SINE Alu -11 301 1 211 224 0 35 chr4 6750841 6750899 -195577448 - MIR SINE MIR -101 161 106 337 264 33 137 chr4 6750949 6751075 -195577272 + L1ME4a LINE L1 5945 6048 -73 1719 149 39 62 chr4 6751075 6751232 -195577115 - AluJb SINE Alu -10 302 154 2044 116 42 3 chr4 6751232 6751517 -195576830 - AluSx SINE Alu -16 296 1 1719 149 39 62 chr4 6751517 6751668 -195576679 - AluJb SINE Alu -158 154 1 337 264 33 137 chr4 6751668 6751723 -195576624 + L1ME4a LINE L1 6048 6107 -14 200 323 0 0 chr4 6751846 6751908 -195576439 - MIR SINE MIR -119 143 82 2389 79 3 10 chr4 6752102 6752407 -195575940 - AluSp SINE Alu -10 303 1 1686 173 8 4 chr4 6755003 6755269 -195573078 - AluJb SINE Alu -45 267 1 1178 150 0 11 chr4 6755316 6755503 -195572844 + AluSg/x SINE Alu 120 304 -6 244 281 34 22 chr4 6755516 6755605 -195572742 - L1ME4a LINE L1 -69 6052 5963 212 281 22 45 chr4 6755663 6755721 -195572626 + MIR SINE MIR 106 163 -99 1979 147 0 26 chr4 6755721 6756033 -195572314 + AluJo SINE Alu 1 304 -8 212 281 22 45 chr4 6756033 6756063 -195572284 + MIR SINE MIR 163 192 -70 278 238 188 0 chr4 6756163 6756264 -195572083 - MIR SINE MIR -55 153 34 2345 103 0 6 chr4 6756525 6756836 -195571511 - AluSx SINE Alu -3 309 1 2048 132 26 3 chr4 6756852 6757156 -195571191 - AluSx SINE Alu -1 311 1 1388 141 103 4 chr4 6757851 6758093 -195570254 - AluJo SINE Alu -10 302 37 391 265 99 88 chr4 6758120 6758403 -195569944 - L1MC5 LINE L1 -37 7924 7639 1814 142 7 10 chr4 6758919 6759215 -195569132 - AluJb SINE Alu -4 308 14 297 240 91 50 chr4 6759571 6759692 -195568655 - MIR SINE MIR -117 145 20 206 333 15 0 chr4 6760337 6760403 -195567944 + L2 LINE L2 3242 3308 -5 2227 156 59 45 chr4 6760562 6760793 -195567554 + MSTA LTR MaLR 1 242 -186 2268 99 0 0 chr4 6760793 6761087 -195567260 + AluSp SINE Alu 1 294 -19 2227 156 59 45 chr4 6761087 6761277 -195567070 + MSTA LTR MaLR 242 428 0 2455 93 100 28 chr4 6761585 6761984 -195566363 - MSTA LTR MaLR 0 428 1 2769 140 56 22 chr4 6764339 6764474 -195563873 + MER4C LTR ERV1 1 130 -335 1474 138 109 4 chr4 6764474 6764749 -195563598 + AluJb SINE Alu 1 304 -8 2769 140 56 22 chr4 6764749 6765063 -195563284 + MER4C LTR ERV1 130 465 0 360 301 48 14 chr4 6765071 6765217 -195563130 - MIR SINE MIR -56 206 56 2151 87 7 3 chr4 6765244 6765533 -195562814 - AluSx SINE Alu -20 292 3 578 240 157 23 chr4 6765583 6765800 -195562547 + MIR SINE MIR 17 262 0 380 199 202 17 chr4 6766184 6766319 -195562028 + AluSq SINE Alu 107 255 -48 1351 172 75 4 chr4 6766382 6766650 -195561697 + AluJo SINE Alu 2 288 -24 6969 131 38 26 chr4 6766652 6766861 -195561486 + HSMAR2 DNA Mariner 45 250 -1052 2215 100 0 10 chr4 6766861 6767162 -195561185 - AluSc SINE Alu -11 298 1 6969 131 38 26 chr4 6767162 6768195 -195560152 + HSMAR2 DNA Mariner 250 1301 -1 195 220 0 0 chr4 6769624 6769674 -195558673 + (CACG)n Simple_repeat Simple_repeat 2 51 0 256 250 97 0 chr4 6771759 6771831 -195556516 - L2 LINE L2 -1 3312 3234 253 469 40 6 chr4 6773790 6773965 -195554382 + MER5A DNA MER1_type 9 189 0 313 531 5 5 chr4 6774488 6774682 -195553665 - AluSx SINE Alu -119 183 13 613 414 13 4 chr4 6775574 6775806 -195552541 + AluSp SINE Alu 2 235 -78 630 405 9 4 chr4 6778264 6778496 -195549851 + AluSg SINE Alu 64 296 -14 23 0 0 0 chr4 6778548 6778571 -195549776 + GC_rich Low_complexity Low_complexity 1 23 0 249 486 0 7 chr4 6778717 6778857 -195549490 - L1PA8 LINE L1 -23 6149 6011 435 385 29 15 chr4 6779798 6780003 -195548344 - SVA Other Other -1045 341 134 198 0 0 0 chr4 6780100 6780122 -195548225 + (TAA)n Simple_repeat Simple_repeat 2 23 0 308 381 48 0 chr4 6780189 6780315 -195548032 + AluSq/x SINE Alu 2 133 -169 27 0 0 0 chr4 6781573 6781600 -195546747 + AT_rich Low_complexity Low_complexity 1 27 0 198 0 0 0 chr4 6782126 6782148 -195546199 + (CCG)n Simple_repeat Simple_repeat 2 23 0 728 343 88 62 chr4 6782566 6783167 -195545180 + L1M4 LINE L1 3676 4292 -1854 454 433 5 23 chr4 6783190 6783554 -195544793 + L1PA15 LINE L1 5807 6155 0 23 0 0 0 chr4 6783677 6783700 -195544647 + AT_rich Low_complexity Low_complexity 1 23 0 502 461 11 7 chr4 6783767 6784047 -195544300 - AluSq SINE Alu -30 283 3 430 307 20 0 chr4 6785652 6785753 -195542594 - SVA Other Other -1091 295 193 376 373 75 0 chr4 6785753 6785914 -195542433 + FAM SINE Alu 1 173 -2 344 493 11 14 chr4 6786020 6786298 -195542049 - AluSc SINE Alu -20 279 3 565 384 11 0 chr4 6787199 6787376 -195540971 - SVA Other Other -1076 310 132 246 271 42 0 chr4 6789188 6789284 -195539063 - MIR SINE MIR -134 128 29 181 405 100 5 chr4 6790402 6790622 -195537725 + L2 LINE L2 2470 2710 -604 229 294 147 10 chr4 6790721 6790823 -195537524 + L2 LINE L2 2947 3062 -251 199 196 22 43 chr4 6790932 6790978 -195537369 - MIR SINE MIR -216 46 2 188 283 50 17 chr4 6791088 6791148 -195537199 - MER5A DNA MER1_type 0 189 128 324 354 73 6 chr4 6791574 6791738 -195536609 - MIR SINE MIR -78 184 10 2000 79 0 18 chr4 6793677 6793954 -195534393 + AluY SINE Alu 27 298 -13 2276 73 0 16 chr4 6794425 6794738 -195533609 - AluSg SINE Alu -2 308 1 1474 185 10 27 chr4 6794873 6795165 -195533182 + AluJb SINE Alu 1 287 -25 319 280 110 8 chr4 6795897 6796015 -195532332 + L2 LINE L2 3143 3272 0 191 275 0 0 chr4 6796047 6796087 -195532260 - L2 LINE L2 -12 3301 3262 2293 78 0 10 chr4 6796538 6796834 -195531513 - AluSg SINE Alu -17 293 1 2306 93 0 0 chr4 6797235 6797535 -195530812 - AluSx SINE Alu -12 300 1 321 288 117 0 chr4 6797675 6797786 -195530561 + MIR3 SINE MIR 33 156 -52 316 330 69 12 chr4 6798048 6798221 -195530126 - MIR SINE MIR -64 198 16 1857 104 42 21 chr4 6799316 6799603 -195528744 - AluSc SINE Alu -16 293 1 185 313 48 0 chr4 6800097 6800180 -195528167 + MIR SINE MIR 154 240 -22 1924 116 46 0 chr4 6803702 6803986 -195524361 - AluSg SINE Alu -13 297 1 1707 184 0 9 chr4 6804404 6804719 -195523628 + AluJb SINE Alu 1 312 0 2356 79 0 3 chr4 6804819 6805122 -195523225 + AluSg SINE Alu 1 302 -8 266 190 16 38 chr4 6805352 6805536 -195522811 + (TG)n Simple_repeat Simple_repeat 1 180 0 494 199 11 43 chr4 6805628 6805814 -195522533 + (TG)n Simple_repeat Simple_repeat 1 180 0 208 162 78 36 chr4 6805769 6805936 -195522411 + (ATGTG)n Simple_repeat Simple_repeat 1 174 0 * 437 182 24 30 chr4 6805857 6806022 -195522325 + (TG)n Simple_repeat Simple_repeat 1 164 0 336 360 65 7 chr4 6806194 6806488 -195521859 - L2 LINE L2 -618 2696 2386 234 0 0 0 chr4 6806606 6806634 -195521713 + MLT2A2 LTR ERVL 4 31 -422 3531 79 24 31 chr4 6806636 6806976 -195521371 + HERVL LTR ERVL 5113 5454 -200 399 83 0 0 chr4 6806976 6807036 -195521311 + (TATG)n Simple_repeat Simple_repeat 1 60 0 2231 104 0 0 chr4 6807036 6807315 -195521032 - AluSx SINE Alu -33 279 1 3531 79 24 31 chr4 6807315 6807519 -195520828 + HERVL LTR ERVL 5452 5654 0 3563 38 11 27 chr4 6807519 6807970 -195520377 + MLT2A1 LTR ERVL 1 444 0 209 299 0 30 chr4 6808055 6808122 -195520225 - L2 LINE L2 -76 3196 3132 435 236 149 43 chr4 6809375 6809536 -195518811 - MER5B DNA MER1_type 0 178 1 533 335 62 0 chr4 6809992 6810186 -195518161 + MIR SINE MIR 27 232 -30 281 240 250 42 chr4 6810603 6810795 -195517552 - MIR SINE MIR -29 233 2 278 290 20 10 chr4 6810925 6811025 -195517322 + L2 LINE L2 2787 2887 -427 226 262 98 0 chr4 6811159 6811220 -195517127 + L2 LINE L2 3209 3275 -38 217 258 86 43 chr4 6811300 6811393 -195516954 + MIR SINE MIR 85 181 -81 322 252 159 27 chr4 6812139 6812311 -195516036 + MIR3 SINE MIR 47 241 -21 343 349 38 0 chr4 6813510 6813642 -195514705 + L2 LINE L2 3127 3263 -9 2026 158 0 3 chr4 6813947 6814257 -195514090 - AluJb SINE Alu -3 309 1 2298 111 3 0 chr4 6814590 6814887 -195513460 - AluSx SINE Alu -14 298 1 300 293 132 9 chr4 6816306 6816412 -195511935 + L2 LINE L2 3153 3271 -1 181 213 40 67 chr4 6816509 6816584 -195511763 + L2 LINE L2 3162 3234 -79 524 318 95 37 chr4 6816812 6817139 -195511208 + L2 LINE L2 2967 3312 -1 211 269 141 0 chr4 6817550 6817628 -195510719 + MIR SINE MIR 84 172 -90 238 277 256 15 chr4 6818032 6818169 -195510178 + L2 LINE L2 2926 3095 -177 259 253 0 25 chr4 6818223 6818302 -195510045 + L1ME LINE L1 5743 5819 -302 280 336 118 8 chr4 6818543 6818662 -195509685 + L2 LINE L2 3133 3264 -8 2450 90 0 3 chr4 6819807 6820117 -195508230 + AluSx SINE Alu 1 309 -3 2425 99 3 0 chr4 6820648 6820951 -195507396 - AluSx SINE Alu -8 304 1 394 276 111 50 chr4 6824821 6825002 -195503345 + MIR SINE MIR 20 211 -51 982 213 43 14 chr4 6825005 6825212 -195503135 + MIR SINE MIR 7 219 -43 1147 211 72 7 chr4 6825729 6826033 -195502314 - MER33 DNA MER1_type 0 324 1 2112 126 40 7 chr4 6826277 6826578 -195501769 - AluSx SINE Alu -1 311 1 198 273 18 0 chr4 6826599 6826654 -195501693 + MIR SINE MIR 159 214 -48 184 183 183 14 chr4 6826653 6826724 -195501623 - L3 LINE CR1 -880 697 615 * 184 294 272 11 chr4 6826696 6826788 -195501559 + L2 LINE L2 3149 3264 -8 269 215 0 43 chr4 6829790 6829883 -195498464 + (TA)n Simple_repeat Simple_repeat 2 90 0 21 0 0 0 chr4 6829997 6830018 -195498329 + AT_rich Low_complexity Low_complexity 1 21 0 2418 102 0 9 chr4 6830019 6830334 -195498013 + AluSx SINE Alu 1 312 0 25 0 0 0 chr4 6831459 6831484 -195496863 + AT_rich Low_complexity Low_complexity 1 25 0 298 200 0 0 chr4 6831525 6831580 -195496767 + MLT1E3 LTR MaLR 565 619 -5 701 255 126 69 chr4 6831585 6831613 -195496734 + L2 LINE L2 2724 2749 -564 750 238 37 0 chr4 6831613 6831777 -195496570 + FAM SINE Alu 1 170 -5 701 255 126 69 chr4 6831777 6832003 -195496344 + L2 LINE L2 2749 2961 -352 2102 99 10 42 chr4 6832003 6832316 -195496031 - AluSx SINE Alu -9 303 1 701 255 126 69 chr4 6832316 6832629 -195495718 + L2 LINE L2 2961 3313 0 249 200 0 0 chr4 6832646 6832691 -195495656 + L2 LINE L2 3210 3254 -18 238 196 20 0 chr4 6832975 6833026 -195495321 + L2 LINE L2 1875 1926 -1388 2250 116 0 13 chr4 6833196 6833506 -195494841 + AluSg SINE Alu 1 306 -4 2258 121 0 0 chr4 6833582 6833879 -195494468 - AluSx SINE Alu -15 297 1 185 208 267 50 chr4 6834417 6834518 -195493829 + MIR SINE MIR 20 142 -120 191 300 115 8 chr4 6834739 6834869 -195493478 + L2 LINE L2 2811 2954 -318 191 270 54 79 chr4 6835111 6835265 -195493082 - MIR SINE MIR -63 145 33 290 256 58 0 chr4 6835577 6835669 -195492678 + MIR SINE MIR 69 164 -68 1216 84 0 0 chr4 6835702 6835844 -195492503 - AluSq/x SINE Alu -170 142 1 363 313 88 19 chr4 6835845 6836005 -195492342 - MIR SINE MIR -80 182 12 201 208 75 0 chr4 6836042 6836095 -195492252 - L2 LINE L2 -74 3198 3142 219 218 218 16 chr4 6836112 6836236 -195492111 + L2 LINE L2 2888 3036 -236 808 188 28 28 chr4 6836589 6836765 -195491582 + MER20 DNA MER1_type 18 193 -26 299 240 247 27 chr4 6836939 6837089 -195491258 - MIR SINE MIR -73 189 7 252 240 0 0 chr4 6837150 6837200 -195491147 + L2 LINE L2 3137 3186 -86 202 243 0 81 chr4 6837590 6837664 -195490683 + MIR SINE MIR 75 142 -120 308 321 58 15 chr4 6838090 6838227 -195490120 - MIR SINE MIR -4 258 116 270 250 214 9 chr4 6838307 6838419 -195489928 - MIR SINE MIR -122 140 6 204 307 69 0 chr4 6838457 6838558 -195489789 - MER5A DNA MER1_type -45 144 37 1971 117 92 0 chr4 6839102 6839384 -195488963 - AluSx SINE Alu -4 308 1 2120 122 0 3 chr4 6841181 6841476 -195486871 - AluSx SINE Alu -18 294 1 346 283 92 11 chr4 6841851 6841976 -195486371 - MIR SINE MIR -58 150 51 1119 215 0 14 chr4 6842126 6842349 -195485998 + AluJo SINE Alu 88 307 -5 2432 93 0 0 chr4 6842400 6842701 -195485646 + AluSg SINE Alu 1 301 -9 1246 131 0 6 chr4 6842701 6842876 -195485471 + AluSg/x SINE Alu 134 307 -5 1678 176 13 20 chr4 6842890 6843196 -195485151 + AluJb SINE Alu 3 306 -6 2342 94 0 3 chr4 6843315 6843614 -195484733 + AluSq SINE Alu 1 298 -15 180 338 95 0 chr4 6843703 6843777 -195484570 + MIR SINE MIR 175 255 -7 946 170 12 29 chr4 6843955 6844126 -195484221 + FRAM SINE Alu 1 167 -9 1280 164 9 13 chr4 6844266 6844476 -195483871 + AluJo SINE Alu 86 296 -16 2464 85 0 0 chr4 6844476 6844782 -195483565 + AluSg SINE Alu 1 306 -4 1280 164 9 13 chr4 6844782 6844797 -195483550 + AluJo SINE Alu 296 310 -2 2243 91 7 0 chr4 6844955 6845242 -195483105 + AluSq SINE Alu 7 295 -18 391 297 24 91 chr4 6845741 6845950 -195482397 + MIR SINE MIR 57 251 -11 240 291 98 78 chr4 6846915 6847159 -195481188 + L2 LINE L2 3020 3268 -4 2289 93 0 35 chr4 6848251 6848562 -195479785 - AluSq SINE Alu -13 300 1 384 211 169 41 chr4 6848713 6848917 -195479430 - MIR SINE MIR -26 236 14 2373 96 3 0 chr4 6849334 6849637 -195478710 - AluSx SINE Alu -8 304 1 1706 137 56 14 chr4 6850244 6850412 -195477935 - AluJb SINE Alu -15 297 111 180 0 0 0 chr4 6850412 6850432 -195477915 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1706 137 56 14 chr4 6850432 6850548 -195477799 - AluJb SINE Alu -201 111 1 307 255 122 20 chr4 6850816 6850914 -195477433 - MIR SINE MIR -131 131 24 2180 131 3 6 chr4 6851100 6851414 -195476933 + AluSq SINE Alu 1 313 0 833 328 8 0 chr4 6851448 6851689 -195476658 + MIR SINE MIR 20 262 0 257 258 21 43 chr4 6851857 6851950 -195476397 + MIR3 SINE MIR 112 202 -6 2279 97 30 0 chr4 6851986 6852286 -195476061 - AluSc SINE Alu 0 309 1 558 179 125 9 chr4 6852324 6852436 -195475911 + FLAM_A SINE Alu 1 125 -8 6797 69 9 12 chr4 6855085 6855942 -195472405 + SVA Other Other 531 1385 -1 3747 205 105 42 chr4 6856052 6856530 -195471817 + L1ME1 LINE L1 2093 2540 -4000 1649 187 35 7 chr4 6856530 6856819 -195471528 + AluJo SINE Alu 1 297 -15 3747 205 105 42 chr4 6856819 6857901 -195470446 + L1ME1 LINE L1 2540 3553 -2987 2537 63 0 0 chr4 6857901 6858200 -195470147 - AluY SINE Alu -12 299 1 2202 128 0 0 chr4 6858208 6858505 -195469842 - AluSx SINE Alu -10 302 6 3747 205 105 42 chr4 6858505 6859206 -195469141 + L1ME1 LINE L1 3559 4536 -2004 1821 230 105 14 chr4 6859203 6859772 -195468575 + L1ME1 LINE L1 5922 6542 -18 * 367 254 148 28 chr4 6859809 6859951 -195468396 + L1MC/D LINE L1 5612 5770 -2038 1684 78 207 8 chr4 6860215 6860457 -195467890 - AluSg1 SINE Alu -19 290 1 27 0 0 0 chr4 6860457 6860484 -195467863 + AT_rich Low_complexity Low_complexity 1 27 0 243 362 0 29 chr4 6861328 6861433 -195466914 + MIR SINE MIR 29 130 -132 547 280 176 3 chr4 6862250 6862586 -195465761 - L1MC4 LINE L1 -89 7953 7560 959 187 101 86 chr4 6862588 6863005 -195465342 - LTR37B LTR ERV1 -45 423 1 970 256 140 47 chr4 6863071 6863664 -195464683 - L1ME1 LINE L1 -9 6157 5466 21 0 0 0 chr4 6864392 6864413 -195463934 + GC_rich Low_complexity Low_complexity 1 21 0 882 155 99 6 chr4 6866068 6866229 -195462118 - FRAM SINE Alu -1 175 1 2323 95 14 0 chr4 6867356 6867651 -195460696 + AluSx SINE Alu 1 299 -13 350 233 33 42 chr4 6869342 6869462 -195458885 - MIR SINE MIR -116 146 28 367 259 123 0 chr4 6869560 6869700 -195458647 + MIR SINE MIR 58 216 -46 2230 111 0 0 chr4 6870917 6871205 -195457142 + AluSx SINE Alu 1 288 -24 2101 101 6 54 chr4 6871756 6872072 -195456275 + AluSq SINE Alu 1 301 -12 2269 108 0 7 chr4 6872694 6872999 -195455348 - AluSc SINE Alu -6 303 1 2397 56 3 3 chr4 6873028 6873312 -195455035 - AluY SINE Alu -16 295 12 1629 60 0 0 chr4 6873748 6873965 -195454382 + GSAT Satellite centromeric 1 217 0 754 123 13 175 chr4 6874200 6874428 -195453919 + 7SK RNA RNA 1 191 -2 2370 90 3 0 chr4 6874532 6874831 -195453516 + AluSx SINE Alu 1 300 -12 1784 159 68 3 chr4 6874839 6875192 -195453155 + L1MB3 LINE L1 5775 6150 -33 2196 108 31 0 chr4 6875276 6875564 -195452783 + AluSg SINE Alu 1 297 -13 429 273 46 41 chr4 6875577 6875720 -195452627 + L1ME3A LINE L1 5959 6105 -65 2346 110 0 0 chr4 6875720 6876028 -195452319 - AluSx SINE Alu -4 308 1 429 273 46 41 chr4 6876028 6876078 -195452269 + L1ME3A LINE L1 6105 6153 -17 216 290 195 6 chr4 6876509 6876678 -195451669 + L2 LINE L2 2558 2758 -556 192 355 11 32 chr4 6876829 6876922 -195451425 + L2 LINE L2 2928 3018 -254 360 278 102 24 chr4 6877506 6877711 -195450636 - MIR SINE MIR -34 228 8 202 275 110 28 chr4 6878191 6878300 -195450047 + L2 LINE L2 3150 3267 -5 197 318 136 45 chr4 6880004 6880202 -195448145 - MIR SINE MIR -26 236 21 1907 146 3 23 chr4 6880910 6881212 -195447135 + AluSx SINE Alu 4 299 -13 2308 111 0 13 chr4 6882306 6882442 -195445905 + AluSx SINE Alu 1 137 -175 2246 112 0 3 chr4 6882442 6882738 -195445609 + AluSg SINE Alu 1 295 -15 2308 111 0 13 chr4 6882738 6882908 -195445439 + AluSx SINE Alu 137 303 -9 691 191 37 0 chr4 6883247 6883383 -195444964 + FLAM_C SINE Alu 2 142 -1 207 0 0 0 chr4 6883465 6883488 -195444859 + (TG)n Simple_repeat Simple_repeat 2 24 0 232 269 147 9 chr4 6885167 6885283 -195443064 + MIR SINE MIR 45 177 -69 2423 80 7 0 chr4 6885603 6885904 -195442443 - AluSq SINE Alu -10 303 1 351 270 81 9 chr4 6888582 6888693 -195439654 - MIR SINE MIR -72 136 18 262 0 53 0 chr4 6888729 6888767 -195439580 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 2038 125 0 4 chr4 6888772 6889051 -195439296 - AluSx SINE Alu -34 278 1 2403 53 13 20 chr4 6889212 6889514 -195438833 + AluY SINE Alu 1 300 -11 466 304 67 17 chr4 6889534 6889774 -195438573 + L1ME LINE L1 5532 5783 -338 25 31 0 0 chr4 6890157 6890189 -195438158 + AT_rich Low_complexity Low_complexity 1 32 0 524 282 73 10 chr4 6890342 6890548 -195437799 - MER20 DNA MER1_type 0 219 1 2612 40 0 20 chr4 6890937 6891241 -195437106 - AluY SINE Alu -13 298 1 332 330 51 25 chr4 6891336 6891533 -195436814 + MIR SINE MIR 59 260 -2 419 282 38 72 chr4 6893756 6894018 -195434329 + MER112 DNA MER1_type 2 254 -2 352 318 0 80 chr4 6894167 6894211 -195434136 - MIR3 SINE MIR -50 158 112 2222 124 3 0 chr4 6894211 6894517 -195433830 + AluSx SINE Alu 1 307 -5 352 318 0 80 chr4 6894517 6894623 -195433724 - MIR3 SINE MIR -96 112 20 2226 100 7 0 chr4 6896211 6896512 -195431835 - AluY SINE Alu -8 303 1 925 155 20 0 chr4 6897986 6898169 -195430178 - AluSg/x SINE Alu 0 316 131 263 326 10 10 chr4 6898169 6898267 -195430080 + MIR SINE MIR 109 206 -56 1905 182 3 0 chr4 6898616 6898918 -195429429 + AluJb SINE Alu 1 303 -9 27 73 0 0 chr4 6898959 6899014 -195429333 + AT_rich Low_complexity Low_complexity 1 55 0 2351 104 0 10 chr4 6900273 6900582 -195427765 + AluSg1 SINE Alu 1 306 -3 397 199 202 12 chr4 6903313 6903437 -195424910 - AluJb SINE Alu -8 294 174 675 273 116 40 chr4 6903455 6903902 -195424445 - L1MC5 LINE L1 -30 7931 7451 2133 158 0 0 chr4 6903913 6904223 -195424124 + AluJb SINE Alu 1 310 -2 1980 126 0 0 chr4 6904229 6904498 -195423849 + AluSg SINE Alu 1 269 -41 356 280 11 0 chr4 6905935 6906028 -195422319 - L2 LINE L2 -14 3299 3206 245 29 29 0 chr4 6906029 6906063 -195422284 + (TG)n Simple_repeat Simple_repeat 2 36 0 701 118 49 118 chr4 6906393 6906596 -195421751 - MER53 DNA DNA 0 189 1 191 250 39 0 chr4 6906970 6907022 -195421325 + L2 LINE L2 3217 3270 -2 521 130 65 16 chr4 6908116 6908544 -195419803 + (TG)n Simple_repeat Simple_repeat 1 448 0 282 147 54 92 chr4 6908476 6908660 -195419687 + (TAGTG)n Simple_repeat Simple_repeat 3 179 0 * 334 145 67 16 chr4 6908662 6909170 -195419177 + (TG)n Simple_repeat Simple_repeat 1 534 0 314 107 101 0 chr4 6909216 6909375 -195418972 + (TG)n Simple_repeat Simple_repeat 1 175 0 252 161 69 11 chr4 6909388 6909475 -195418872 + (TG)n Simple_repeat Simple_repeat 2 93 0 1638 170 4 0 chr4 6909926 6910197 -195418150 - AluSq SINE Alu -18 295 24 245 281 138 56 chr4 6910337 6910497 -195417850 + L2 LINE L2 2923 3095 -177 181 234 0 21 chr4 6911429 6911476 -195416871 - MIR SINE MIR -126 82 37 348 235 76 34 chr4 6912659 6912778 -195415569 + MIR SINE MIR 40 163 -99 289 308 100 15 chr4 6913440 6913570 -195414777 + MIR SINE MIR 52 192 -70 304 263 72 105 chr4 6913860 6913940 -195414407 + L2 LINE L2 3105 3186 -127 851 207 18 62 chr4 6913940 6914167 -195414180 - MER20 DNA MER1_type -2 217 1 304 263 72 105 chr4 6914167 6914295 -195414052 + L2 LINE L2 3186 3306 -7 222 108 27 0 chr4 6914362 6914399 -195413948 - MIR SINE MIR -62 146 109 539 214 48 8 chr4 6915633 6915759 -195412588 + MIR SINE MIR 40 170 -92 313 237 21 54 chr4 6916633 6916726 -195411621 + L2 LINE L2 3156 3245 -27 262 290 30 20 chr4 6917558 6917658 -195410689 - MIR SINE MIR -142 120 20 635 241 11 43 chr4 6917803 6917990 -195410357 - MIR SINE MIR -51 211 31 645 220 26 6 chr4 6919042 6919200 -195409147 + L1ME1 LINE L1 6025 6165 -1 1814 147 39 23 chr4 6919237 6919408 -195408939 - AluSx SINE Alu 0 312 132 207 0 0 0 chr4 6919408 6919431 -195408916 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1814 147 39 23 chr4 6919431 6919566 -195408781 - AluSx SINE Alu -180 132 1 443 314 84 30 chr4 6919566 6920026 -195408321 - L1M4 LINE L1 -2630 3516 3015 2133 103 3 3 chr4 6920026 6920328 -195408019 + AluSc SINE Alu 1 302 -7 443 314 84 30 chr4 6920328 6920426 -195407921 - L1M4 LINE L1 -3131 3015 2924 23 68 0 0 chr4 6920854 6920898 -195407449 + AT_rich Low_complexity Low_complexity 1 44 0 498 303 147 47 chr4 6921156 6921234 -195407113 + L1ME4a LINE L1 5617 5686 -435 2449 52 0 13 chr4 6921234 6921540 -195406807 + AluY SINE Alu 1 302 -9 498 303 147 47 chr4 6921540 6921821 -195406526 + L1ME4a LINE L1 5686 6012 -109 563 258 82 6 chr4 6921951 6922110 -195406237 - MIR SINE MIR -48 214 44 198 225 0 0 chr4 6922565 6922605 -195405742 - MIR SINE MIR -110 152 113 530 146 115 0 chr4 6922953 6923049 -195405298 - MER53 DNA DNA -82 107 1 452 253 266 0 chr4 6923217 6923375 -195404972 + MIR SINE MIR 38 237 -25 1922 184 34 50 chr4 6923782 6924200 -195404147 + MLT2D LTR ERVL 4 414 0 709 321 4 20 chr4 6925375 6925627 -195402720 - MIR SINE MIR 0 262 15 246 314 86 46 chr4 6926057 6926232 -195402115 - MLT1J1 LTR MaLR -264 182 1 891 160 20 85 chr4 6926325 6926439 -195401908 + MLT1B LTR MaLR 1 98 -292 2201 123 0 0 chr4 6926439 6926749 -195401598 + AluSx SINE Alu 1 310 -2 891 160 20 85 chr4 6926749 6926834 -195401513 + MLT1B LTR MaLR 98 187 -203 566 264 109 10 chr4 6928156 6928357 -195399990 - MLT1C LTR MaLR -7 460 240 806 96 52 0 chr4 6928405 6928520 -195399827 + L1PA11 LINE L1 6054 6174 0 2371 66 0 3 chr4 6929554 6929856 -195398491 - AluY SINE Alu -10 301 1 391 368 41 22 chr4 6929911 6930229 -195398118 - L1MC/D LINE L1 -2036 5772 5449 915 160 7 7 chr4 6930526 6930676 -195397671 - FRAM SINE Alu -15 151 2 511 246 12 76 chr4 6930723 6930894 -195397453 - L1ME3A LINE L1 -5 6165 6006 321 232 36 45 chr4 6930901 6931013 -195397334 - L1ME3A LINE L1 -401 5769 5659 217 217 29 14 chr4 6932621 6932690 -195395657 + (CATA)n Simple_repeat Simple_repeat 3 72 0 189 213 0 0 chr4 6932761 6932808 -195395539 + (CA)n Simple_repeat Simple_repeat 2 48 0 392 270 40 24 chr4 6932808 6932934 -195395413 - L1MC4 LINE L1 -130 7912 7785 789 196 35 30 chr4 6932936 6933135 -195395212 - MLT2D LTR ERVL -7 407 208 391 339 63 27 chr4 6933401 6933622 -195394725 + MIR SINE MIR 28 256 -6 1596 259 60 12 chr4 6934093 6934575 -195393772 + MLT1D LTR MaLR 1 505 0 1345 240 35 114 chr4 6934789 6935360 -195392987 + L2 LINE L2 2430 2955 -359 794 227 16 11 chr4 6935361 6935541 -195392806 + MLT1A1 LTR MaLR 1 181 -184 404 165 94 0 chr4 6935541 6935626 -195392721 + MER4A LTR ERV1 1 93 -571 1597 133 156 96 chr4 6935626 6936011 -195392336 + MER4A LTR ERV1 257 664 0 820 245 0 16 chr4 6936012 6936204 -195392143 + MLT1A1 LTR MaLR 177 365 0 298 289 12 0 chr4 6936204 6936287 -195392060 + L2 LINE L2 2954 3037 -276 237 265 59 29 chr4 6936324 6936426 -195391921 - LTR16C LTR ERVL -2 489 385 190 340 135 23 chr4 6936808 6937023 -195391324 + L2 LINE L2 3075 3313 0 1515 154 50 50 chr4 6937122 6937420 -195390927 - AluJo SINE Alu -14 298 1 229 305 53 23 chr4 6937621 6937752 -195390595 + L1ME4a LINE L1 5974 6108 -13 282 29 0 0 chr4 6938204 6938239 -195390108 + (TTCA)n Simple_repeat Simple_repeat 2 36 0 229 375 48 0 chr4 6938248 6938352 -195389995 - L2 LINE L2 -25 3288 3180 544 103 0 0 chr4 6938730 6938808 -195389539 + AluJb SINE Alu 154 231 -81 720 103 176 73 chr4 6938831 6938967 -195389380 - AluJo SINE Alu -161 151 2 1589 231 43 10 chr4 6938970 6939368 -195388979 - MER67A LTR ERV1 -128 415 5 1467 208 31 0 chr4 6939354 6939671 -195388676 - MLT1C LTR MaLR -140 327 1 * 1812 152 0 26 chr4 6939676 6939979 -195388368 - AluSx SINE Alu -17 295 1 1852 163 5 25 chr4 6940782 6941150 -195387197 + L1MA6 LINE L1 4915 5275 -871 2078 104 7 0 chr4 6941154 6941458 -195386889 + AluSg SINE Alu 1 306 0 406 194 153 0 chr4 6941477 6941575 -195386772 + L1MA6 LINE L1 5963 6075 -225 349 117 0 0 chr4 6941578 6941638 -195386709 - AluJo SINE Alu 0 302 243 1287 124 5 0 chr4 6941641 6941827 -195386520 - AluJo SINE Alu -125 187 1 1102 162 33 50 chr4 6941827 6942068 -195386279 + L1MA6 LINE L1 6062 6298 -2 233 263 187 43 chr4 6942289 6942420 -195385927 + MIR3 SINE MIR 32 163 -45 207 221 11 79 chr4 6942465 6942655 -195385692 + (AGGTG)n Simple_repeat Simple_repeat 4 180 0 230 224 22 62 chr4 6942693 6942872 -195385475 + (AGGTG)n Simple_repeat Simple_repeat 5 176 0 2129 182 45 9 chr4 6943564 6944008 -195384339 + MLT1C LTR MaLR 1 460 -7 682 250 7 0 chr4 6944624 6944768 -195383579 - MLT1C LTR MaLR -2 465 321 494 289 72 4 chr4 6944778 6945013 -195383334 + LTR33 LTR ERVL 235 485 -36 180 322 34 0 chr4 6945068 6945127 -195383220 + L2 LINE L2 3207 3267 -5 404 298 67 8 chr4 6946053 6946197 -195382150 + MIR SINE MIR 20 170 -56 378 283 20 108 chr4 6946590 6946841 -195381506 - L2 LINE L2 -91 3181 2953 2372 60 0 13 chr4 6947005 6947304 -195381043 + AluY SINE Alu 1 295 -16 1665 191 10 93 chr4 6947410 6947818 -195380529 - MLT1A2 LTR MaLR 0 374 1 361 267 199 6 chr4 6948651 6948812 -195379535 - MER117 DNA MER1_type -3 194 3 1506 213 33 0 chr4 6948901 6949201 -195379146 - AluJb SINE Alu 0 312 3 2086 92 0 7 chr4 6949207 6949526 -195378821 - AluSx SINE Alu 0 317 1 1273 213 84 3 chr4 6949948 6950244 -195378103 - MLT1C LTR MaLR -8 459 140 320 316 30 48 chr4 6950510 6950678 -195377669 + MIR SINE MIR 7 171 -91 247 306 24 0 chr4 6950755 6950840 -195377507 + L2 LINE L2 3226 3312 -1 2648 35 0 0 chr4 6950887 6951198 -195377149 + AluY SINE Alu 1 311 0 2048 245 32 4 chr4 6951216 6951372 -195376975 - L1MB8 LINE L1 -9 6169 6014 1407 252 39 120 chr4 6951372 6951825 -195376522 - L1MD1 LINE L1 -238 6073 5585 1853 155 0 3 chr4 6951825 6952122 -195376225 + AluJb SINE Alu 11 306 -6 1407 252 39 120 chr4 6952122 6952170 -195376177 - L1MD1 LINE L1 -726 5585 5535 1907 164 3 3 chr4 6952170 6952480 -195375867 - AluSx SINE Alu -2 310 1 1407 252 39 120 chr4 6952480 6952794 -195375553 - L1MD1 LINE L1 -776 5535 5323 8968 236 58 17 chr4 6952796 6953381 -195374966 - L1MD1 LINE L1 -1249 4966 4406 2505 64 0 3 chr4 6953381 6953693 -195374654 - AluY SINE Alu 0 311 1 8968 236 58 17 chr4 6953693 6956130 -195372217 - L1MD1 LINE L1 -1809 4406 1859 446 203 0 85 chr4 6956224 6956401 -195371946 - AluSg/x SINE Alu -4 306 145 313 329 61 61 chr4 6956808 6957088 -195371259 + L1MEd LINE L1 809 1088 -5031 1516 195 0 10 chr4 6957123 6957415 -195370932 - AluJo SINE Alu -23 289 1 437 234 188 8 chr4 6957433 6957561 -195370786 - MLT1C LTR MaLR -503 151 1 1266 253 160 39 chr4 6957561 6958230 -195370117 - L2 LINE L2 -586 2728 2141 1736 113 49 0 chr4 6958230 6958495 -195369852 + AluSg SINE Alu 33 310 0 1266 253 160 39 chr4 6958495 6958603 -195369744 - L2 LINE L2 -1173 2141 2047 1481 128 6 144 chr4 6958603 6958923 -195369424 + AluJb SINE Alu 1 276 -36 1266 253 160 39 chr4 6958923 6959075 -195369272 - L2 LINE L2 -1267 2047 1915 207 0 0 0 chr4 6959075 6959098 -195369249 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1266 253 160 39 chr4 6959098 6959289 -195369058 - L2 LINE L2 -1399 1915 1456 310 106 76 0 chr4 6959326 6959392 -195368955 + CT-rich Low_complexity Low_complexity 3 73 0 2355 108 0 0 chr4 6959456 6959751 -195368596 - AluSx SINE Alu -17 295 1 4246 165 45 12 chr4 6959783 6960609 -195367738 - L1MC1 LINE L1 0 6333 5481 794 186 3 43 chr4 6960687 6960706 -195367641 - MLT1A1 LTR MaLR 0 365 347 2367 94 3 19 chr4 6960706 6961024 -195367323 - AluSp SINE Alu 0 313 1 794 186 3 43 chr4 6961024 6961313 -195367034 - MLT1A1 LTR MaLR -18 347 1 366 262 210 15 chr4 6961335 6961606 -195366741 - L2 LINE L2 -1986 1328 1005 242 315 108 0 chr4 6962898 6963009 -195365338 + MIR3 SINE MIR 60 182 -26 215 284 196 7 chr4 6963591 6963739 -195364608 - L2 LINE L2 -228 3085 2910 849 200 51 0 chr4 6963912 6964107 -195364240 - MER3 DNA MER1_type -4 205 1 216 97 0 0 chr4 6964714 6964745 -195363602 + (TGAA)n Simple_repeat Simple_repeat 4 34 0 2275 109 3 0 chr4 6964988 6965292 -195363055 - AluSx SINE Alu -7 305 1 339 312 0 0 chr4 6967363 6967456 -195360891 + L2 LINE L2 2967 3059 -213 2681 48 3 3 chr4 6969274 6969587 -195358760 + AluSp SINE Alu 1 313 0 646 263 23 23 chr4 6969654 6969825 -195358522 - MER5B DNA MER1_type -5 173 3 370 310 41 35 chr4 6969900 6970045 -195358302 + L2 LINE L2 3167 3312 -1 2076 120 43 10 chr4 6970129 6970428 -195357919 - AluSg SINE Alu -1 309 1 361 242 62 4 chr4 6970493 6970609 -195357738 - MIR SINE MIR -62 146 30 2257 86 3 16 chr4 6970887 6971023 -195357324 + AluSx SINE Alu 1 137 -175 2470 67 0 3 chr4 6971023 6971320 -195357027 + AluY SINE Alu 1 296 -15 2257 86 3 16 chr4 6971320 6971487 -195356860 + AluSx SINE Alu 137 300 -12 672 315 67 10 chr4 6971973 6972287 -195356060 - L1ME3A LINE L1 -76 6094 5763 1661 74 30 0 chr4 6972515 6972717 -195355630 - AluSg/x SINE Alu -14 298 91 1905 105 86 4 chr4 6972723 6972990 -195355357 + AluSg SINE Alu 1 289 -21 306 67 22 0 chr4 6972990 6973035 -195355312 + Alu SINE Alu 1 46 -257 1595 260 115 50 chr4 6973035 6973208 -195355139 - L1ME3A LINE L1 -1427 4719 4559 2313 111 0 0 chr4 6973208 6973505 -195354842 + AluSx SINE Alu 1 297 -15 1595 260 115 50 chr4 6973505 6973703 -195354644 - L1ME3A LINE L1 -1587 4559 4375 2564 85 6 0 chr4 6973703 6974066 -195354281 - L1PA8 LINE L1 0 6172 5808 1595 260 115 50 chr4 6974066 6974765 -195353582 - L1ME3A LINE L1 -1771 4375 3579 2175 111 0 13 chr4 6974819 6975138 -195353209 + AluSx SINE Alu 5 312 0 639 198 48 0 chr4 6975198 6975324 -195353023 + FLAM_A SINE Alu 1 132 -1 280 245 53 0 chr4 6975570 6975664 -195352683 - L1ME3A LINE L1 -2573 3573 3475 720 217 44 6 chr4 6975982 6976162 -195352185 - MER5A DNA MER1_type 0 189 3 214 245 31 51 chr4 6976174 6976272 -195352075 + L2 LINE L2 3169 3264 -49 1134 146 34 0 chr4 6976643 6976821 -195351526 - AluSg/x SINE Alu 0 310 127 2397 107 0 0 chr4 6976821 6977130 -195351217 - AluSg1 SINE Alu 0 309 1 2638 19 6 35 chr4 6977147 6977462 -195350885 + AluY SINE Alu 1 306 -5 202 179 0 0 chr4 6977641 6977680 -195350667 + L2 LINE L2 3218 3256 -16 2214 102 0 14 chr4 6978419 6978712 -195349635 - AluSx SINE Alu -23 289 1 247 287 77 35 chr4 6979133 6979276 -195349071 + MIR SINE MIR 80 228 -34 355 279 74 16 chr4 6979808 6979930 -195348417 - L2 LINE L2 -5 3308 3180 333 241 58 0 chr4 6979951 6980038 -195348309 + MER69 DNA AcHobo 2435 2526 0 254 225 234 0 chr4 6980144 6980255 -195348092 - Charlie8 DNA MER1_type -2245 172 36 1468 159 40 0 chr4 6981478 6981705 -195346642 + AluJb SINE Alu 42 277 -35 206 0 69 0 chr4 6981712 6981741 -195346606 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 264 59 0 0 chr4 6982177 6982211 -195346136 + (CA)n Simple_repeat Simple_repeat 1 34 0 1750 166 6 32 chr4 6982228 6982542 -195345805 - AluJo SINE Alu -6 306 1 2662 20 0 7 chr4 6982697 6982992 -195345355 - AluYa5 SINE Alu -18 293 1 1921 158 0 32 chr4 6983889 6984199 -195344148 - AluJb SINE Alu -12 300 1 2166 97 7 7 chr4 6987613 6987903 -195340444 - AluSx SINE Alu -22 290 1 539 93 0 0 chr4 6988419 6988494 -195339853 - AluJ/FRAM SINE Alu -8 304 230 1068 259 15 23 chr4 6988624 6988967 -195339380 - L1MC4 LINE L1 -2 8040 7701 1192 112 0 12 chr4 6988968 6989129 -195339218 - AluSg/x SINE Alu -17 295 137 767 218 34 10 chr4 6989130 6989336 -195339011 - L1MC4 LINE L1 -414 7628 7418 1040 219 138 12 chr4 6989373 6989619 -195338728 - AluJo SINE Alu -30 282 6 1582 214 163 12 chr4 6989622 6990108 -195338239 - L1MC4 LINE L1 -654 7388 6830 366 303 68 25 chr4 6990377 6990539 -195337808 - MIR SINE MIR -74 188 20 2518 82 0 0 chr4 6990611 6990916 -195337431 - AluY SINE Alu -6 305 1 636 287 27 27 chr4 6992176 6992399 -195335948 - MIR SINE MIR -12 250 28 2484 80 0 0 chr4 6993213 6993512 -195334835 - AluY SINE Alu -12 299 1 935 261 30 4 chr4 6994016 6994250 -195334097 + MIR SINE MIR 2 241 -21 247 290 167 14 chr4 6994923 6995061 -195333286 + MIR SINE MIR 9 167 -95 809 250 11 0 chr4 6995449 6995633 -195332714 + MER5A DNA MER1_type 1 186 -3 382 200 265 6 chr4 6996176 6996346 -195332001 + L2 LINE L2 1915 2128 -1186 1363 59 53 0 chr4 6996383 6996570 -195331777 - MER107 DNA MER1_type 0 197 1 315 401 16 29 chr4 6997274 6997516 -195330831 + L1MDa LINE L1 21 259 -6281 2302 116 0 0 chr4 6997620 6997922 -195330425 - AluSx SINE Alu -1 311 10 975 227 74 83 chr4 6998404 6998680 -195329667 + L1MDa LINE L1 913 1190 -5351 2221 117 0 7 chr4 6998680 6999021 -195329326 - AluSx SINE Alu 0 312 1 2074 129 3 7 chr4 6999023 6999318 -195329029 - AluJb SINE Alu -18 294 1 975 227 74 83 chr4 6999318 6999616 -195328731 + L1MDa LINE L1 1191 1440 -5101 628 263 0 11 chr4 6999619 6999794 -195328553 + AluSq SINE Alu 2 174 -139 356 322 66 62 chr4 6999832 7000100 -195328247 - L1MCa LINE L1 -2745 3681 3410 189 0 0 0 chr4 7000100 7000121 -195328226 + (C)n Simple_repeat Simple_repeat 1 21 0 356 322 66 62 chr4 7000121 7000172 -195328175 - L1MCa LINE L1 -3016 3410 3361 29 90 0 0 chr4 7000375 7000453 -195327894 + AT_rich Low_complexity Low_complexity 1 78 0 518 296 70 58 chr4 7000500 7001303 -195327044 - L1MCa LINE L1 -4573 2034 1024 270 277 8 40 chr4 7001351 7001511 -195326836 + C-rich Low_complexity Low_complexity 1 154 0 221 278 8 48 chr4 7001701 7001827 -195326520 + CT-rich Low_complexity Low_complexity 2 122 0 2492 68 0 34 chr4 7002095 7002417 -195325930 - AluY SINE Alu 0 311 1 1683 137 91 4 chr4 7002792 7003055 -195325292 + AluJb SINE Alu 1 286 -26 2554 86 0 3 chr4 7003411 7003724 -195324623 - AluSx SINE Alu 0 312 1 263 254 160 41 chr4 7003935 7004104 -195324243 + MIR3 SINE MIR 3 191 -17 209 253 209 0 chr4 7004399 7004490 -195323857 - MIR SINE MIR -63 145 36 196 330 70 51 chr4 7005290 7005563 -195322784 + L2 LINE L2 2994 3271 -1 289 234 70 16 chr4 7005605 7005733 -195322614 - MIR3 SINE MIR -71 137 3 259 303 65 45 chr4 7005989 7006144 -195322203 - MIR3 SINE MIR -37 171 14 2450 75 7 0 chr4 7006278 7006572 -195321775 + AluSc SINE Alu 1 296 -13 255 276 20 51 chr4 7008869 7008967 -195319380 + MIR SINE MIR 160 254 -8 411 380 22 11 chr4 7009460 7009644 -195318703 - MIR SINE MIR -70 192 7 259 330 43 27 chr4 7009896 7010081 -195318266 - L2 LINE L2 -221 3051 2864 370 336 0 15 chr4 7010280 7010417 -195317930 - L2 LINE L2 -189 3083 2949 303 297 55 21 chr4 7011361 7011506 -195316841 + L1ME LINE L1 5592 5741 -380 2285 108 10 3 chr4 7011633 7011940 -195316407 + AluSc SINE Alu 1 309 0 457 311 79 6 chr4 7012140 7012317 -195316030 - MIR SINE MIR -63 199 10 228 313 15 0 chr4 7012699 7012766 -195315581 + L2 LINE L2 3201 3268 -4 866 264 35 9 chr4 7013278 7013505 -195314842 + MIR SINE MIR 27 259 -3 266 273 13 0 chr4 7013506 7013583 -195314764 + MER116 DNA Mariner 2 79 -1 1362 126 0 0 chr4 7013604 7013786 -195314561 - AluSx SINE Alu -19 293 112 940 81 0 0 chr4 7013941 7014052 -195314295 - AluSx SINE Alu -190 123 13 185 384 73 33 chr4 7015060 7015211 -195313136 + MIR SINE MIR 106 262 0 1092 176 39 5 chr4 7015821 7016026 -195312321 + MER20 DNA MER1_type 1 212 -7 209 354 135 25 chr4 7016210 7016529 -195311818 - L2 LINE L2 -1 3271 2918 360 206 63 48 chr4 7016947 7017073 -195311274 - L1MD3 LINE L1 -15 7980 7853 198 0 0 0 chr4 7017468 7017490 -195310857 + (AGCTG)n Simple_repeat Simple_repeat 3 24 0 1011 173 108 124 chr4 7017797 7018044 -195310303 - MLT1A1 LTR MaLR 0 365 124 2051 157 13 0 chr4 7018044 7018350 -195309997 - AluJo SINE Alu 0 312 3 1011 173 108 124 chr4 7018350 7018473 -195309874 - MLT1A1 LTR MaLR -241 124 1 232 343 112 12 chr4 7018496 7018747 -195309600 + L2 LINE L2 2970 3245 -27 198 0 0 0 chr4 7018757 7018779 -195309568 + (TGAA)n Simple_repeat Simple_repeat 1 22 0 396 287 115 6 chr4 7019458 7019632 -195308715 + MIR SINE MIR 70 262 0 203 226 113 0 chr4 7020180 7020233 -195308114 - L2 LINE L2 -40 3232 3174 677 248 26 9 chr4 7020233 7020449 -195307898 + MIR SINE MIR 14 235 -27 194 230 40 27 chr4 7021222 7021296 -195307051 - L2 LINE L2 -8 3264 3190 1170 121 11 0 chr4 7021425 7021599 -195306748 - THE1C LTR MaLR 0 375 200 1067 101 0 0 chr4 7021756 7021904 -195306443 - THE1C LTR MaLR -226 149 2 185 324 45 18 chr4 7022589 7022700 -195305647 - MIR3 SINE MIR -92 116 3 364 296 113 31 chr4 7022808 7022967 -195305380 + MIR3 SINE MIR 15 186 -22 2123 120 0 7 chr4 7023158 7023449 -195304898 - AluJb SINE Alu -23 289 1 291 256 26 13 chr4 7023487 7023595 -195304752 + MIR SINE MIR 38 140 -68 228 258 16 16 chr4 7024110 7024172 -195304175 + L2 LINE L2 3191 3252 -20 254 289 72 0 chr4 7024903 7024986 -195303361 + MIR SINE MIR 32 120 -142 181 282 100 27 chr4 7025552 7025662 -195302685 - MIR SINE MIR -68 140 23 469 276 73 55 chr4 7026015 7026112 -195302235 + L1MC4 LINE L1 7685 7779 -263 273 57 0 0 chr4 7026112 7026147 -195302200 + (TATG)n Simple_repeat Simple_repeat 2 36 0 1574 124 128 23 chr4 7026147 7026405 -195301942 - AluSx SINE Alu -27 285 1 469 276 73 55 chr4 7026405 7026650 -195301697 + L1MC4 LINE L1 7778 8034 -8 194 250 62 0 chr4 7027172 7027236 -195301111 + L2 LINE L2 2994 3061 -211 524 168 0 9 chr4 7028719 7028826 -195299521 + (TGG)n Simple_repeat Simple_repeat 1 106 0 342 0 0 0 chr4 7028948 7028986 -195299361 + (CA)n Simple_repeat Simple_repeat 1 38 0 1519 253 66 2 chr4 7028987 7029414 -195298933 - MLT1C LTR MaLR -8 459 6 3902 211 3 25 chr4 7029425 7029665 -195298682 - L1MB7 LINE L1 0 6184 5940 1950 155 0 32 chr4 7029665 7029981 -195298366 - AluJb SINE Alu -6 306 1 3902 211 3 25 chr4 7029981 7030591 -195297756 - L1MB7 LINE L1 -244 5940 5352 531 242 48 0 chr4 7030986 7031110 -195297237 - MER45A DNA AcHobo -47 131 2 326 322 34 27 chr4 7031480 7031626 -195296721 - MIR SINE MIR 0 262 116 264 159 48 0 chr4 7031717 7031780 -195296567 - MIR SINE MIR -138 124 59 840 275 90 62 chr4 7032381 7032791 -195295556 + MLT1D LTR MaLR 1 473 -32 14081 127 47 8 chr4 7032791 7032991 -195295356 - Tigger1 DNA MER2_type 0 2418 2227 1839 103 38 75 chr4 7032991 7033311 -195295036 + AluSx SINE Alu 1 309 0 14081 127 47 8 chr4 7033311 7035436 -195292911 - Tigger1 DNA MER2_type -191 2227 1 840 275 90 62 chr4 7035436 7035470 -195292877 + MLT1D LTR MaLR 473 505 0 529 270 65 56 chr4 7035763 7035978 -195292369 + MIR SINE MIR 12 228 -34 301 375 52 30 chr4 7036498 7036901 -195291446 + L2 LINE L2 2341 2752 -562 214 241 12 0 chr4 7037309 7037475 -195290872 + (AGGTG)n Simple_repeat Simple_repeat 4 171 0 259 229 38 0 chr4 7037507 7037804 -195290543 + (AGGTG)n Simple_repeat Simple_repeat 1 308 0 234 305 195 0 chr4 7038755 7038873 -195289474 - L1ME LINE L1 -439 5682 5542 2053 108 0 14 chr4 7038974 7039283 -195289064 + AluSx SINE Alu 24 312 0 189 146 49 49 chr4 7039919 7039960 -195288387 - MIR SINE MIR -62 146 106 1892 226 72 53 chr4 7040490 7041033 -195287314 + MLT2B3 LTR ERVL 2 554 0 607 253 27 32 chr4 7041057 7041121 -195287226 - MER5A DNA MER1_type -3 186 123 2563 51 0 3 chr4 7041121 7041415 -195286932 + AluY SINE Alu 1 293 -18 607 253 27 32 chr4 7041415 7041536 -195286811 - MER5A DNA MER1_type -66 123 2 2653 217 18 36 chr4 7042230 7042583 -195285764 - L1MEc LINE L1 -3310 2905 2547 2017 159 0 7 chr4 7042583 7042885 -195285462 - AluJb SINE Alu -12 300 1 2653 217 18 36 chr4 7042885 7043163 -195285184 - L1MEc LINE L1 -3668 2547 2332 2151 154 25 3 chr4 7043163 7043520 -195284827 + MLT1A1 LTR MaLR 1 365 0 2653 217 18 36 chr4 7043520 7043710 -195284637 - L1MEc LINE L1 -3883 2332 2140 191 261 67 60 chr4 7045155 7045289 -195283058 + L3 LINE CR1 1440 1574 -3 464 274 79 70 chr4 7045301 7045629 -195282718 - L2 LINE L2 -14 3258 2928 459 295 53 14 chr4 7045986 7046193 -195282154 - L1MA9 LINE L1 -57 6255 6041 343 237 4 24 chr4 7047289 7047390 -195280957 - MIR SINE MIR -46 162 61 987 195 56 53 chr4 7047450 7047669 -195280678 - MER33 DNA MER1_type -2261 324 101 2333 88 0 0 chr4 7047669 7047988 -195280359 - AluSq SINE Alu 0 319 1 987 195 56 53 chr4 7047988 7048090 -195280257 - MER33 DNA MER1_type -2484 101 1 286 313 47 16 chr4 7048271 7048399 -195279948 - MIR SINE MIR -88 174 43 * 326 256 195 46 chr4 7048382 7048644 -195279703 - L2 LINE L2 0 3313 3013 2014 159 38 28 chr4 7048646 7049201 -195279146 + MLT2A2 LTR ERVL 1 554 0 193 386 47 0 chr4 7049201 7049328 -195279019 - L2 LINE L2 -258 3014 2882 1785 203 53 36 chr4 7049595 7050062 -195278285 + L1MB5 LINE L1 5694 6168 -6 313 280 38 48 chr4 7050834 7050978 -195277369 - MIR SINE MIR -62 146 2 542 193 16 0 chr4 7051046 7051184 -195277163 + L1MB4 LINE L1 6035 6177 -6 335 349 48 0 chr4 7051205 7051331 -195277016 + L1 LINE L1 2706 2837 -3309 763 220 48 0 chr4 7051522 7051690 -195276657 - MER58A DNA MER1_type 0 224 49 244 111 0 0 chr4 7051959 7051995 -195276352 - MADE1 DNA Mariner -37 43 8 2342 87 7 23 chr4 7052327 7052636 -195275711 + AluSq SINE Alu 1 304 -9 270 273 67 16 chr4 7052898 7053033 -195275314 - MIR SINE MIR -56 152 11 323 281 144 14 chr4 7053207 7053353 -195274994 - MIR SINE MIR -74 188 24 258 160 200 10 chr4 7053441 7053541 -195274806 - MIR SINE MIR -117 145 27 30 0 0 0 chr4 7055479 7055509 -195272838 + GC_rich Low_complexity Low_complexity 1 30 0 194 0 39 0 chr4 7056546 7056572 -195271775 + (CCCCCG)n Simple_repeat Simple_repeat 3 29 0 194 318 18 36 chr4 7056890 7057000 -195271347 - MIR SINE MIR -114 148 41 466 250 16 16 chr4 7057125 7057253 -195271094 - L2 LINE L2 -6 3307 3180 801 254 118 16 chr4 7057496 7057811 -195270536 - MLT1I LTR MaLR 0 409 63 1977 186 13 55 chr4 7058076 7058534 -195269813 + MLT1C LTR MaLR 6 444 -23 357 292 119 69 chr4 7058548 7058909 -195269438 - MLT1J LTR MaLR -10 501 111 2234 128 0 0 chr4 7058909 7059206 -195269141 - AluSx SINE Alu -15 297 1 357 292 119 69 chr4 7059206 7059307 -195269040 - MLT1J LTR MaLR -400 111 16 1327 229 81 28 chr4 7059314 7059820 -195268527 - MER69 DNA AcHobo -5 2521 1989 184 265 60 99 chr4 7059905 7060056 -195268291 - MER5A DNA MER1_type -7 182 38 567 259 56 16 chr4 7060142 7060439 -195267908 - MER69 DNA AcHobo -1998 528 166 1909 163 67 0 chr4 7060440 7060796 -195267551 + MLT1B LTR MaLR 1 380 -10 376 269 19 0 chr4 7060792 7060900 -195267447 - MER69 DNA AcHobo -1053 173 64 * 259 207 52 0 chr4 7061149 7061207 -195267140 + L3 LINE CR1 1335 1395 -182 442 290 97 5 chr4 7061306 7061492 -195266855 + MIR SINE MIR 3 205 -57 1045 216 110 49 chr4 7061499 7061907 -195266440 - MLT1C LTR MaLR -4 463 25 397 318 163 25 chr4 7062271 7062418 -195265929 - L2 LINE L2 -38 3234 3109 1506 188 9 59 chr4 7062418 7062738 -195265609 + AluJo SINE Alu 1 304 -8 397 318 163 25 chr4 7062738 7062867 -195265480 - L2 LINE L2 -163 3109 2920 1931 153 40 0 chr4 7063333 7063633 -195264714 - AluJb SINE Alu 0 312 1 293 239 99 0 chr4 7063662 7063733 -195264614 - MIR SINE MIR -154 108 31 507 254 154 29 chr4 7063755 7063865 -195264482 - MIR SINE MIR 0 262 167 2264 115 7 0 chr4 7063865 7064169 -195264178 + AluSx SINE Alu 1 306 -6 507 254 154 29 chr4 7064169 7064290 -195264057 - MIR SINE MIR -95 167 4 341 293 34 27 chr4 7064340 7064487 -195263860 + MIR3 SINE MIR 3 150 -58 224 366 142 6 chr4 7064503 7064686 -195263661 + MIR SINE MIR 38 245 -17 934 192 315 45 chr4 7064875 7065250 -195263097 + L1MD2 LINE L1 5862 6337 -22 1952 123 0 42 chr4 7065403 7065721 -195262626 + AluSx SINE Alu 11 316 0 320 307 47 8 chr4 7065874 7066001 -195262346 - L1ME4a LINE L1 -3 6118 5987 180 77 0 0 chr4 7066202 7066228 -195262119 + (CATA)n Simple_repeat Simple_repeat 3 28 0 323 295 63 48 chr4 7066480 7066536 -195261811 - L1ME4a LINE L1 -459 5662 5608 1984 128 29 0 chr4 7066536 7066844 -195261503 - AluSx SINE Alu 0 316 1 323 295 63 48 chr4 7066844 7066870 -195261477 - L1ME4a LINE L1 -513 5608 5584 778 169 62 6 chr4 7066870 7067047 -195261300 - L1MA5 LINE L1 -4 6296 6110 2397 76 0 48 chr4 7067053 7067368 -195260979 + AluSq SINE Alu 1 300 -13 323 295 63 48 chr4 7067368 7067574 -195260773 - L1ME4a LINE L1 -541 5580 5360 323 315 0 22 chr4 7067584 7067676 -195260671 - L1MC4 LINE L1 -1339 6703 6614 372 22 0 0 chr4 7068272 7068317 -195260030 + (CA)n Simple_repeat Simple_repeat 2 46 0 392 262 52 64 chr4 7068790 7068859 -195259488 - L1ME LINE L1 -451 5788 5720 846 219 63 0 chr4 7068859 7069064 -195259283 - MER20 DNA MER1_type 0 219 2 392 262 52 64 chr4 7069064 7069166 -195259181 - L1ME LINE L1 -519 5720 5619 1472 204 24 21 chr4 7069175 7069508 -195258839 + MLT1A1 LTR MaLR 1 334 -31 2539 87 0 0 chr4 7069621 7069930 -195258417 - AluSq SINE Alu -4 309 1 335 148 0 19 chr4 7070019 7070073 -195258274 + Alu SINE Alu 1 53 -247 337 295 12 42 chr4 7070304 7070576 -195257771 + CT-rich Low_complexity Low_complexity 1 263 0 1406 163 0 22 chr4 7070728 7070955 -195257392 + AluJo SINE Alu 72 293 -19 1234 289 84 29 chr4 7070969 7071698 -195256649 - L1ME LINE L1 -1011 5204 4436 426 297 71 62 chr4 7071721 7071843 -195256504 - L1MEc LINE L1 -3481 2734 2615 3287 164 26 53 chr4 7071843 7071865 -195256482 + L1MB3 LINE L1 5447 5468 -715 1683 208 43 3 chr4 7071865 7072212 -195256135 + MLT1A1 LTR MaLR 1 361 -4 3287 164 26 53 chr4 7072212 7072946 -195255401 + L1MB3 LINE L1 5468 6183 0 426 297 71 62 chr4 7072946 7073497 -195254850 - L1MEc LINE L1 -3600 2615 2093 806 178 89 0 chr4 7073654 7073845 -195254502 + L1MB3 LINE L1 5833 6040 -143 348 231 23 95 chr4 7073876 7074097 -195254250 - L1MEc LINE L1 -3173 3042 2838 * 1017 335 44 26 chr4 7074091 7074822 -195253525 - L1MEc LINE L1 -5546 850 107 228 217 24 24 chr4 7074859 7074942 -195253405 - HAL1 LINE L1 -935 1572 1490 567 248 19 6 chr4 7074967 7075128 -195253219 - MER104 DNA Tc2 -17 163 1 1422 272 50 75 chr4 7075238 7075558 -195252789 - L1MEd LINE L1 -4866 1253 926 648 222 0 0 chr4 7075558 7075710 -195252637 - FLAM_A SINE Alu 0 152 1 1422 272 50 75 chr4 7075710 7076257 -195252090 - L1MEd LINE L1 -5193 926 407 251 289 61 37 chr4 7076538 7076947 -195251400 - L1M4 LINE L1 -1100 5046 4628 212 330 29 19 chr4 7077026 7077129 -195251218 + MIR3 SINE MIR 91 194 -14 1510 200 31 7 chr4 7077198 7077488 -195250859 - AluJo SINE Alu -15 297 1 349 255 10 31 chr4 7077565 7077663 -195250684 - MIR SINE MIR -70 192 97 509 268 153 10 chr4 7077800 7078009 -195250338 - MIR SINE MIR 0 262 24 789 200 87 20 chr4 7079055 7079250 -195249097 - MLT1J LTR MaLR -114 397 190 616 280 100 4 chr4 7079378 7079617 -195248730 - MIR SINE MIR 0 262 1 1361 146 10 5 chr4 7079741 7079963 -195248384 + AluJb SINE Alu 86 308 0 1200 223 57 38 chr4 7079979 7080346 -195248001 - MLT1A2 LTR MaLR 0 374 1 443 74 0 158 chr4 7081034 7081129 -195247218 - MADE1 DNA Mariner 0 80 1 628 121 0 0 chr4 7081230 7081321 -195247026 + AluJb SINE Alu 199 289 -23 184 161 0 0 chr4 7082163 7082194 -195246153 - L2 LINE L2 -19 3294 3264 317 318 54 8 chr4 7082614 7082743 -195245604 + L2 LINE L2 3115 3249 -23 602 287 35 10 chr4 7082860 7083062 -195245285 - MIR SINE MIR -12 250 44 181 274 68 14 chr4 7083208 7083281 -195245066 + MIR SINE MIR 59 135 -73 225 288 0 0 chr4 7084179 7084238 -195244109 - MIR SINE MIR -112 150 92 303 339 25 8 chr4 7084984 7085105 -195243242 - L2 LINE L2 -10 3303 3181 188 289 0 0 chr4 7086007 7086059 -195242288 + L3 LINE CR1 1022 1073 -504 393 298 140 0 chr4 7086059 7086237 -195242110 + L3 LINE CR1 1333 1535 -42 392 231 196 7 chr4 7086749 7086892 -195241455 - MER5A DNA MER1_type -6 183 14 286 259 52 26 chr4 7087138 7087254 -195241093 + LTR16C LTR ERVL 353 471 -20 650 300 23 9 chr4 7087803 7088023 -195240324 + MIR SINE MIR 21 243 -19 1007 231 5 0 chr4 7088100 7088303 -195240044 - MER58A DNA MER1_type 0 224 21 420 299 130 35 chr4 7089924 7090208 -195238139 + L2 LINE L2 3003 3313 0 282 295 49 25 chr4 7090548 7090670 -195237677 + MIR SINE MIR 60 184 -78 250 214 60 86 chr4 7090697 7090814 -195237533 + L2 LINE L2 3016 3129 -143 247 166 33 44 chr4 7090866 7091047 -195237300 + (CA)n Simple_repeat Simple_repeat 2 180 0 194 191 43 21 chr4 7091722 7091769 -195236578 + MIR3 SINE MIR 114 161 -47 617 242 47 43 chr4 7091802 7092013 -195236334 - L1MB7 LINE L1 -14 6166 5953 448 243 96 0 chr4 7092120 7092297 -195236050 + MIR SINE MIR 50 243 -19 2176 210 48 95 chr4 7092490 7093181 -195235166 + L1MB8 LINE L1 5480 6136 -42 1657 180 25 3 chr4 7093181 7093499 -195234848 - AluJb SINE Alu 0 312 1 2176 210 48 95 chr4 7093499 7093541 -195234806 + L1MB8 LINE L1 6136 6178 0 792 280 24 0 chr4 7094151 7094358 -195233989 - MIR SINE MIR -38 224 13 260 336 32 0 chr4 7094408 7094533 -195233814 + L1ME4a LINE L1 5993 6121 0 2255 98 0 7 chr4 7094560 7094867 -195233480 + AluSx SINE Alu 1 305 0 2219 128 0 0 chr4 7094907 7095211 -195233136 + AluSx SINE Alu 1 304 -8 255 250 18 36 chr4 7095338 7095450 -195232897 + (TCTA)n Simple_repeat Simple_repeat 4 113 0 192 163 0 0 chr4 7095452 7095495 -195232852 + GA-rich Low_complexity Low_complexity 2 44 0 234 293 13 0 chr4 7095542 7095617 -195232730 - L1MB7 LINE L1 -258 5863 5788 628 133 0 0 chr4 7095655 7095767 -195232580 - AluSx SINE Alu 0 302 191 1111 106 0 0 chr4 7095768 7095909 -195232438 - AluSx SINE Alu -172 141 1 278 349 108 5 chr4 7096093 7096288 -195232059 + MIR SINE MIR 14 228 -34 193 254 15 30 chr4 7096886 7096953 -195231394 + MIR SINE MIR 81 146 -62 1575 148 121 8 chr4 7097024 7097280 -195231067 - AluSg SINE Alu -25 285 1 512 194 8 0 chr4 7097401 7097535 -195230812 + (TTTA)n Simple_repeat Simple_repeat 4 138 0 195 295 64 13 chr4 7097931 7098009 -195230338 - L2 LINE L2 -1 3271 3190 2498 56 7 13 chr4 7098408 7098710 -195229637 - AluY SINE Alu -11 300 1 290 321 71 9 chr4 7100026 7100138 -195228209 - L2 LINE L2 -1 3271 3153 315 221 0 0 chr4 7100578 7100664 -195227683 + (TG)n Simple_repeat Simple_repeat 1 86 0 336 247 12 0 chr4 7101057 7101138 -195227209 - LTR16C LTR ERVL 0 491 410 2913 148 60 4 chr4 7101163 7101663 -195226684 - LTR10A LTR ERV1 -81 528 1 250 274 179 12 chr4 7101706 7101874 -195226473 - LTR16C LTR ERVL -91 400 205 277 175 113 25 chr4 7102986 7103066 -195225281 + MER53 DNA DNA 1 87 -102 3333 159 11 15 chr4 7103067 7103713 -195224634 + MER50 LTR ERV1 3 724 -10 547 121 103 52 chr4 7103696 7103781 -195224566 - MER53 DNA DNA -67 122 28 * 3252 73 14 2 chr4 7103781 7104220 -195224127 - MLT2A1 LTR ERVL 0 444 1 547 121 103 52 chr4 7104220 7104250 -195224097 - MER53 DNA DNA -161 28 1 250 336 29 10 chr4 7104257 7104361 -195223986 - MIR3 SINE MIR -35 173 68 272 282 87 28 chr4 7104671 7104814 -195223533 + MIR SINE MIR 58 210 -52 460 312 74 0 chr4 7105425 7105627 -195222720 + MER112 DNA MER1_type 32 248 -12 5056 184 36 9 chr4 7105800 7106887 -195221460 + MER45R DNA AcHobo 458 1573 -8 191 284 91 45 chr4 7106995 7107083 -195221264 + MIR SINE MIR 22 113 -95 411 213 11 0 chr4 7107188 7107282 -195221065 + MER5A DNA MER1_type 12 106 -83 1877 165 3 34 chr4 7107638 7107960 -195220387 - AluJb SINE Alu 0 312 1 260 302 35 35 chr4 7108108 7108224 -195220123 + MIR3 SINE MIR 72 187 -21 328 275 9 46 chr4 7108514 7108623 -195219724 - MIR SINE MIR -57 151 47 2164 104 21 3 chr4 7109019 7109308 -195219039 + AluSg SINE Alu 1 294 -16 739 248 169 12 chr4 7109498 7110065 -195218282 - L2 LINE L2 -18 3295 2624 231 232 49 61 chr4 7110440 7110522 -195217825 + MER5B DNA MER1_type 68 148 -30 266 229 105 67 chr4 7110567 7110672 -195217675 + MIR SINE MIR 30 138 -70 355 291 185 7 chr4 7111002 7111153 -195217194 - MER5A DNA MER1_type -8 181 4 188 317 0 0 chr4 7111184 7111244 -195217103 + MER5A DNA MER1_type 128 187 -2 566 323 32 32 chr4 7111506 7111723 -195216624 - MIR SINE MIR -6 256 40 547 314 101 18 chr4 7111723 7112051 -195216296 - MLT1J2 LTR MaLR 0 450 96 1659 127 3 67 chr4 7112072 7112241 -195216106 - AluJo SINE Alu -46 266 121 2200 131 49 25 chr4 7112241 7112607 -195215740 + THE1C LTR MaLR 1 375 0 1659 127 3 67 chr4 7112607 7112721 -195215626 - AluJo SINE Alu -191 121 1 243 306 111 9 chr4 7112737 7112845 -195215502 - L3 LINE CR1 -3 1574 1456 333 191 0 0 chr4 7113151 7113219 -195215128 + MLT1C LTR MaLR 60 127 -263 284 191 32 0 chr4 7113237 7113300 -195215047 - MER50 LTR ERV1 -660 74 10 501 248 108 62 chr4 7113308 7113356 -195214991 + MLT1C LTR MaLR 132 176 -291 2061 117 27 0 chr4 7113356 7113654 -195214693 + AluSx SINE Alu 4 309 -3 501 248 108 62 chr4 7113654 7113911 -195214436 + MLT1C LTR MaLR 176 451 -16 664 267 121 7 chr4 7114094 7114404 -195213943 - L2 LINE L2 -302 3011 2670 255 31 0 0 chr4 7114411 7114443 -195213904 + (TTCA)n Simple_repeat Simple_repeat 3 34 0 193 279 207 0 chr4 7114527 7114638 -195213709 - L2 LINE L2 -248 3065 2932 1885 147 20 0 chr4 7114832 7115131 -195213216 - AluSx SINE Alu -2 310 6 1022 75 0 61 chr4 7115133 7115280 -195213067 - AluSq/x SINE Alu -174 138 1 238 229 0 0 chr4 7115636 7115684 -195212663 + MIR SINE MIR 78 125 -137 2085 101 34 0 chr4 7115748 7116044 -195212303 + AluSx SINE Alu 1 306 -6 2376 51 34 0 chr4 7116044 7116338 -195212009 + AluY SINE Alu 1 304 -7 210 255 0 0 chr4 7116403 7116450 -195211897 + MIR SINE MIR 123 169 -93 1403 141 33 40 chr4 7116940 7117244 -195211103 + AluY SINE Alu 3 304 -7 210 255 0 0 chr4 7117309 7117356 -195210991 + MIR SINE MIR 123 169 -93 2297 105 0 0 chr4 7118228 7118533 -195209814 - AluSc SINE Alu -4 305 1 1732 158 3 58 chr4 7118593 7118923 -195209424 + AluJb SINE Alu 1 312 0 352 309 63 16 chr4 7119134 7119260 -195209087 + MIR SINE MIR 85 216 -46 2337 216 58 21 chr4 7119484 7120066 -195208281 + L1MC1 LINE L1 5729 6332 -1 1459 162 113 19 chr4 7120078 7120344 -195208003 + AluJb SINE Alu 1 291 -21 809 180 0 0 chr4 7121856 7121984 -195206363 - FLAM_A SINE Alu -7 135 8 346 220 150 116 chr4 7121987 7122160 -195206187 - MER5A DNA MER1_type -8 181 3 297 356 0 10 chr4 7122175 7122279 -195206068 - MER5A DNA MER1_type -3 186 84 1822 196 0 3 chr4 7122325 7122703 -195205644 - AluJo SINE Alu 0 377 1 1786 92 117 18 chr4 7122714 7122996 -195205351 - AluSp SINE Alu -3 310 1 651 200 145 33 chr4 7123032 7123410 -195204937 - MLT1D LTR MaLR -25 480 22 182 347 13 0 chr4 7123476 7123551 -195204796 + L2 LINE L2 3184 3259 -13 2155 118 0 6 chr4 7123566 7123879 -195204468 - AluSx SINE Alu -1 311 1 213 121 0 0 chr4 7124090 7124123 -195204224 + (TTCA)n Simple_repeat Simple_repeat 1 33 0 337 372 66 27 chr4 7124393 7124651 -195203696 - L1MEc LINE L1 -3981 2415 2148 404 368 114 51 chr4 7125128 7125761 -195202586 - HAL1b LINE L1 -605 1322 71 337 231 231 11 chr4 7125990 7126081 -195202266 + L1ME4a LINE L1 5990 6100 -21 251 321 107 14 chr4 7126101 7126241 -195202106 + MIR SINE MIR 87 239 -23 33 0 0 0 chr4 7127015 7127048 -195201299 + GC_rich Low_complexity Low_complexity 1 33 0 27 110 0 0 chr4 7127670 7127788 -195200559 + GC_rich Low_complexity Low_complexity 1 118 0 338 309 57 0 chr4 7128243 7128366 -195199981 - MIR SINE MIR -73 189 60 204 301 131 43 chr4 7129310 7129685 -195198662 + L2 LINE L2 2827 3234 -38 225 310 69 21 chr4 7130052 7130197 -195198150 - L1ME4a LINE L1 -2 6119 5968 2460 70 0 3 chr4 7131467 7131779 -195196568 - AluY SINE Alu 0 311 1 377 191 95 0 chr4 7131825 7131909 -195196438 - MIR SINE MIR -69 193 102 303 265 51 43 chr4 7132319 7132436 -195195911 + MIR SINE MIR 37 154 -54 219 288 17 0 chr4 7132446 7132505 -195195842 + MIR SINE MIR 124 183 -79 326 271 28 19 chr4 7133382 7133489 -195194858 - MIR SINE MIR -116 146 39 255 196 0 54 chr4 7134028 7134084 -195194263 + C-rich Low_complexity Low_complexity 2 54 0 841 212 29 24 chr4 7134113 7134486 -195193861 - MLT1C LTR MaLR -1 466 51 223 242 71 50 chr4 7135977 7136076 -195192271 - MIR SINE MIR -77 131 31 448 328 73 25 chr4 7136721 7136925 -195191422 - MIR SINE MIR -13 249 36 912 267 137 37 chr4 7140781 7141212 -195187135 - MLT1K LTR MaLR 0 476 3 239 233 70 35 chr4 7141215 7141301 -195187046 - MLT1K LTR MaLR -484 104 16 2145 124 3 10 chr4 7141521 7141835 -195186512 + AluSq SINE Alu 1 312 -1 1825 184 36 33 chr4 7143624 7143988 -195184359 + MLT1A1 LTR MaLR 1 365 0 2198 116 0 0 chr4 7145367 7145668 -195182679 + AluSx SINE Alu 1 301 -11 254 239 0 0 chr4 7145780 7145826 -195182521 + MIR3 SINE MIR 112 157 -51 747 207 59 12 chr4 7145837 7146006 -195182341 - MER58A DNA MER1_type -13 211 35 328 282 105 0 chr4 7147236 7147360 -195180987 - L1ME4a LINE L1 0 6121 5985 2043 154 0 0 chr4 7147360 7147671 -195180676 - AluSx SINE Alu -1 311 1 301 200 62 0 chr4 7147959 7148024 -195180323 - L1ME4a LINE L1 -5 6116 6048 290 286 31 0 chr4 7148260 7148358 -195179989 + MIR SINE MIR 48 148 -60 224 274 8 48 chr4 7149720 7149844 -195178503 - L2 LINE L2 -229 3043 2925 341 295 9 9 chr4 7150151 7150256 -195178091 + MIR3 SINE MIR 58 162 -46 494 300 184 10 chr4 7150811 7151121 -195177226 + L2 LINE L2 1731 2094 -1220 190 330 142 34 chr4 7151299 7151532 -195176815 + L2 LINE L2 2273 2530 -784 1526 179 10 23 chr4 7154258 7154560 -195173787 - AluJb SINE Alu -14 298 1 237 263 17 0 chr4 7156848 7157023 -195171324 + (TG)n Simple_repeat Simple_repeat 2 179 0 249 222 35 0 chr4 7157049 7157220 -195171127 + (TG)n Simple_repeat Simple_repeat 2 178 0 313 217 24 6 chr4 7157249 7157415 -195170932 + (TG)n Simple_repeat Simple_repeat 2 170 0 214 274 57 57 chr4 7161840 7161964 -195166383 - MIR SINE MIR -80 182 59 306 305 80 53 chr4 7162085 7162236 -195166111 + MIR3 SINE MIR 23 177 -31 423 136 45 0 chr4 7162248 7162334 -195166013 - AluJb SINE Alu 0 301 213 329 333 119 6 chr4 7163062 7163230 -195165117 - L2 LINE L2 0 3313 3127 1203 205 91 18 chr4 7163367 7163708 -195164639 + MLT1D LTR MaLR 1 366 -139 206 337 58 0 chr4 7164614 7164700 -195163647 - MIR SINE MIR -78 184 94 512 271 80 24 chr4 7164714 7165131 -195163216 + MLT1F1 LTR MaLR 10 537 -30 3209 159 270 1 chr4 7165758 7166406 -195161941 - LTR12 LTR ERV1 0 826 5 1936 139 76 80 chr4 7166422 7167026 -195161321 - pTR5 LTR ERV1 -1094 1344 743 2015 208 21 68 chr4 7167236 7167809 -195160538 + MLT2B3 LTR ERVL 1 546 -8 567 278 96 5 chr4 7167978 7168165 -195160182 + MIR SINE MIR 47 250 -12 291 312 29 2 chr4 7168173 7168284 -195160063 + MIR SINE MIR 69 180 -62 240 209 0 0 chr4 7168327 7168413 -195159934 + (TTCA)n Simple_repeat Simple_repeat 2 87 0 4453 64 7 0 chr4 7168677 7169227 -195159120 + MER41A LTR ERV1 1 554 0 1253 286 77 31 chr4 7169276 7169610 -195158737 - HAL1 LINE L1 -75 2432 2115 1940 104 93 0 chr4 7169610 7169890 -195158457 - AluSx SINE Alu -6 306 1 1253 286 77 31 chr4 7169890 7170208 -195158139 - HAL1 LINE L1 -392 2115 1750 378 348 84 31 chr4 7170227 7170426 -195157921 - MLT1J LTR MaLR -16 495 271 3237 158 18 125 chr4 7170426 7171000 -195157347 + LTR8 LTR ERV1 1 472 -219 2123 115 0 0 chr4 7171000 7171286 -195157061 + AluSx SINE Alu 1 286 -26 3237 158 18 125 chr4 7171286 7171485 -195156862 + LTR8 LTR ERV1 472 691 0 378 348 84 31 chr4 7171485 7171607 -195156740 - MLT1J LTR MaLR -240 271 157 288 216 95 0 chr4 7171697 7171771 -195156576 - HAL1 LINE L1 -745 1762 1682 2674 197 23 49 chr4 7171969 7172210 -195156137 + MER41C LTR ERV1 1 247 -307 2104 100 3 29 chr4 7172210 7172521 -195155826 + AluSx SINE Alu 1 303 -9 2674 197 23 49 chr4 7172521 7172848 -195155499 + MER41C LTR ERV1 247 554 0 264 214 0 51 chr4 7172985 7173094 -195155253 + MLT1H LTR MaLR 447 549 0 902 271 135 67 chr4 7173094 7173482 -195154865 - HAL1 LINE L1 -851 1656 1296 2172 81 3 3 chr4 7173482 7173804 -195154543 - AluSx SINE Alu 0 322 1 902 271 135 67 chr4 7173804 7174269 -195154078 - HAL1 LINE L1 -1211 1296 729 1988 133 7 7 chr4 7174269 7174571 -195153776 - AluSx SINE Alu -10 302 1 902 271 135 67 chr4 7174571 7174665 -195153682 - HAL1 LINE L1 -1778 729 643 440 307 33 0 chr4 7174831 7175043 -195153304 - HAL1 LINE L1 -2178 329 111 183 328 66 0 chr4 7175171 7175232 -195153115 - L2 LINE L2 -42 3230 3166 631 329 18 18 chr4 7175434 7175656 -195152691 + MIR SINE MIR 5 226 -36 1394 228 23 49 chr4 7176357 7176787 -195151560 - MLT1D LTR MaLR -2 503 85 371 268 16 57 chr4 7176895 7177018 -195151329 + MIR SINE MIR 50 167 -95 267 254 30 0 chr4 7177563 7177630 -195150717 + MIR SINE MIR 69 137 -125 360 364 74 12 chr4 7177706 7177948 -195150399 - MIR SINE MIR -4 258 2 228 35 0 0 chr4 7178181 7178210 -195150137 + (CCA)n Simple_repeat Simple_repeat 1 29 0 195 69 0 0 chr4 7179080 7179109 -195149238 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 232 280 80 0 chr4 7179759 7179834 -195148513 + L2 LINE L2 3192 3272 0 247 290 0 14 chr4 7179964 7180033 -195148314 + L2 LINE L2 3203 3270 -2 1315 148 71 97 chr4 7181088 7181398 -195146949 + AluJo SINE Alu 3 304 -8 2249 91 3 0 chr4 7181582 7181893 -195146454 + AluSq SINE Alu 1 312 0 233 246 33 0 chr4 7182522 7182583 -195145764 + MIR SINE MIR 9 71 -191 734 100 0 0 chr4 7183342 7183442 -195144905 + AluSq SINE Alu 153 252 -61 321 293 0 9 chr4 7183485 7183591 -195144756 + MLT1K LTR MaLR 162 266 -322 539 229 67 14 chr4 7187191 7187364 -195140983 + MIR SINE MIR 9 190 -64 204 311 44 78 chr4 7187715 7187787 -195140560 - L2 LINE L2 -104 3209 3136 1574 184 116 32 chr4 7187787 7188167 -195140180 + MLT2D LTR ERVL 1 412 -2 204 311 44 78 chr4 7188167 7188274 -195140073 - L2 LINE L2 -177 3136 3036 328 307 143 32 chr4 7188673 7188862 -195139485 + MIR SINE MIR 22 231 -31 418 306 76 48 chr4 7188961 7189275 -195139072 + MLT1L LTR MaLR 216 538 -77 182 283 0 0 chr4 7189328 7189374 -195138973 + MIR SINE MIR 216 261 -1 339 242 11 11 chr4 7190256 7190347 -195138000 + L2 LINE L2 2969 3059 -213 262 313 43 26 chr4 7191344 7191459 -195136888 - MIR SINE MIR -97 165 49 203 244 110 0 chr4 7191565 7191647 -195136700 + MIR SINE MIR 39 113 -95 240 86 0 0 chr4 7192501 7192536 -195135811 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 476 320 178 8 chr4 7192548 7193034 -195135313 - L2 LINE L2 -27 3286 2708 216 167 0 0 chr4 7193161 7193197 -195135150 + G-rich Low_complexity Low_complexity 2 37 0 245 233 0 17 chr4 7194064 7194124 -195134223 + CT-rich Low_complexity Low_complexity 4 62 0 382 204 33 39 chr4 7194137 7194318 -195134029 + CT-rich Low_complexity Low_complexity 1 180 0 300 209 30 30 chr4 7194356 7194490 -195133857 + CT-rich Low_complexity Low_complexity 2 135 0 532 237 10 23 chr4 7194506 7194805 -195133542 + CT-rich Low_complexity Low_complexity 1 295 0 288 233 0 48 chr4 7195388 7195491 -195132856 + MER58B DNA MER1_type 244 341 0 314 259 80 56 chr4 7195529 7195691 -195132656 + MIR SINE MIR 11 176 -86 444 82 0 0 chr4 7196090 7196151 -195132196 + (TA)n Simple_repeat Simple_repeat 2 62 0 228 111 0 0 chr4 7197007 7197043 -195131304 + (CA)n Simple_repeat Simple_repeat 2 37 0 187 270 52 52 chr4 7197520 7197635 -195130712 + L2 LINE L2 1963 2077 -1237 260 203 16 16 chr4 7197849 7197913 -195130434 + MIR SINE MIR 82 145 -63 665 269 123 19 chr4 7199495 7199908 -195128439 + L2 LINE L2 2447 2902 -412 2144 112 10 0 chr4 7200053 7200348 -195127999 + AluSx SINE Alu 5 302 -10 344 224 82 31 chr4 7200413 7200511 -195127836 + MIR SINE MIR 20 122 -140 1487 221 126 9 chr4 7200512 7200956 -195127391 + MLT1D LTR MaLR 1 496 -9 471 216 234 0 chr4 7200975 7201071 -195127276 + Tigger2 DNA MER2_type 4 76 -2642 459 92 0 0 chr4 7201071 7201136 -195127211 + (CA)n Simple_repeat Simple_repeat 2 66 0 471 216 234 0 chr4 7201136 7201206 -195127141 + Tigger2 DNA MER2_type 76 209 -2509 597 258 0 26 chr4 7201210 7201365 -195126982 + Tigger2 DNA MER2_type 2558 2708 -10 239 233 163 54 chr4 7201368 7201497 -195126850 + MIR SINE MIR 120 262 0 248 288 68 8 chr4 7201793 7201911 -195126436 + MIR SINE MIR 40 164 -98 1441 142 150 11 chr4 7202451 7202711 -195125636 + AluSg SINE Alu 1 296 -14 259 337 83 0 chr4 7202752 7202957 -195125390 + L1M4 LINE L1 3545 3766 -2380 348 216 201 37 chr4 7203600 7203734 -195124613 - L1ME4a LINE L1 -4 6117 5962 407 368 35 26 chr4 7203751 7203979 -195124368 - L1ME4a LINE L1 -226 5895 5666 984 244 102 48 chr4 7204317 7204777 -195123570 + MLT1D LTR MaLR 1 485 -20 201 366 24 0 chr4 7204892 7204974 -195123373 + L2 LINE L2 2283 2366 -948 268 292 80 9 chr4 7205324 7205437 -195122910 + L2 LINE L2 2944 3064 -249 334 180 169 45 chr4 7205851 7205940 -195122407 - L2 LINE L2 -5 3267 3168 375 256 214 12 chr4 7206094 7206262 -195122085 + MIR SINE MIR 60 261 -1 230 325 25 0 chr4 7206471 7206551 -195121796 - L2 LINE L2 -174 3098 3017 353 246 112 39 chr4 7207702 7207881 -195120466 + MLT1K LTR MaLR 346 537 -51 254 301 58 39 chr4 7207922 7208025 -195120322 - MIR SINE MIR -138 124 20 703 283 82 9 chr4 7208247 7208466 -195119881 + MIR SINE MIR 28 262 0 913 50 8 25 chr4 7208571 7208690 -195119657 + AluY SINE Alu 24 140 -171 * 1168 147 66 0 chr4 7208689 7208886 -195119461 + AluSc SINE Alu 79 288 -21 295 313 52 0 chr4 7209712 7209808 -195118539 + MLT1I LTR MaLR 110 210 -199 1933 113 3 31 chr4 7210012 7210339 -195118008 + AluSx SINE Alu 1 319 0 213 302 0 0 chr4 7211260 7211313 -195117034 + MIR SINE MIR 95 147 -61 1117 210 170 51 chr4 7211727 7212175 -195116172 + MLT1D LTR MaLR 1 501 -4 419 355 110 23 chr4 7213449 7213805 -195114542 + HAL1 LINE L1 880 1276 -1231 213 349 46 34 chr4 7214576 7214751 -195113596 + L2 LINE L2 3094 3270 -2 205 313 12 24 chr4 7214911 7214994 -195113353 - MIR SINE MIR -97 111 30 421 332 155 18 chr4 7215132 7215409 -195112938 + L2 LINE L2 2999 3313 0 492 31 0 0 chr4 7215512 7215577 -195112770 - L1PA2 LINE L1 -162 5993 5929 1280 27 0 0 chr4 7215577 7215726 -195112621 + L1PA2 LINE L1 6007 6155 0 2225 107 3 10 chr4 7215903 7216213 -195112134 + AluSx SINE Alu 1 308 -4 288 298 132 3 chr4 7216485 7216659 -195111688 - MIR SINE MIR -54 208 18 * 695 313 48 4 chr4 7216658 7216885 -195111462 + MIR SINE MIR 14 250 -12 300 336 41 0 chr4 7216916 7217038 -195111309 + MIR3 SINE MIR 33 159 -49 254 284 86 9 chr4 7217077 7217193 -195111154 + MIR3 SINE MIR 7 131 -77 261 307 100 7 chr4 7217256 7217396 -195110951 + MIR3 SINE MIR 7 159 -49 515 248 20 39 chr4 7217556 7217709 -195110638 - MER58B DNA MER1_type 0 341 192 7266 46 5 1 chr4 7218132 7219693 -195108654 + L1PA6 LINE L1 4592 6148 -6 235 138 0 0 chr4 7219717 7219775 -195108572 + Charlie5 DNA MER1_type 2471 2528 -84 23 54 0 0 chr4 7219775 7219812 -195108535 + AT_rich Low_complexity Low_complexity 1 37 0 385 342 21 0 chr4 7220308 7220470 -195107877 - MIR SINE MIR -77 131 8 1699 195 18 34 chr4 7220948 7221328 -195107019 - MLT1B LTR MaLR -16 374 1 401 380 81 9 chr4 7221566 7221787 -195106560 + MIR SINE MIR 21 257 -5 266 327 30 0 chr4 7222812 7222913 -195105434 + MIR SINE MIR 87 190 -72 830 257 4 69 chr4 7222991 7223236 -195105111 + MIR SINE MIR 2 230 -32 463 228 41 81 chr4 7223393 7223491 -195104856 + MER63A DNA MER1_type 1 89 -1599 2375 80 0 3 chr4 7223491 7223803 -195104544 + AluY SINE Alu 1 311 0 463 228 41 81 chr4 7223803 7223901 -195104446 + MER63A DNA MER1_type 89 189 -21 661 284 155 9 chr4 7224192 7224734 -195103613 - L2 LINE L2 -19 3294 2642 557 330 15 15 chr4 7224767 7224964 -195103383 - MIR SINE MIR -31 231 35 198 328 160 8 chr4 7224971 7225102 -195103245 - L2 LINE L2 -668 2646 2496 236 303 45 0 chr4 7225155 7225221 -195103126 - MER91A DNA MER1_type 0 196 128 212 333 14 0 chr4 7225334 7225406 -195102941 + L2 LINE L2 3200 3272 0 251 184 0 0 chr4 7225426 7225475 -195102872 - MIR SINE MIR -129 79 31 197 382 20 20 chr4 7226274 7226376 -195101971 + L3 LINE CR1 1239 1340 -237 209 345 82 73 chr4 7226610 7226938 -195101409 - L2 LINE L2 -3 3269 2939 221 369 70 16 chr4 7226998 7227185 -195101162 - L2 LINE L2 -473 2841 2645 547 240 223 26 chr4 7228288 7228517 -195099830 + L2 LINE L2 935 1208 -2106 241 232 211 11 chr4 7228588 7228683 -195099664 + L2 LINE L2 3197 3310 -3 597 258 36 36 chr4 7229329 7229523 -195098824 - MER3 DNA MER1_type -15 194 1 387 309 24 73 chr4 7229532 7229778 -195098569 - MER113 DNA MER1_type? -279 242 9 302 331 37 7 chr4 7230010 7230146 -195098201 + L2 LINE L2 3132 3271 -1 381 292 62 31 chr4 7230343 7230504 -195097843 + MIR3 SINE MIR 11 176 -32 283 270 70 0 chr4 7230614 7230714 -195097633 + MLT1K LTR MaLR 74 180 -408 248 243 87 78 chr4 7231311 7231414 -195096933 - MIR SINE MIR -131 131 28 1031 195 35 35 chr4 7231766 7232027 -195096320 + MIR SINE MIR 2 262 0 282 300 0 0 chr4 7233092 7233162 -195095185 + MIR SINE MIR 73 142 -120 393 190 25 0 chr4 7233264 7233343 -195095004 + MLT1J LTR MaLR 103 183 -328 240 282 69 23 chr4 7233445 7233576 -195094771 + MLT1J2 LTR MaLR 313 449 -1 255 302 29 86 chr4 7233702 7233841 -195094506 + L2 LINE L2 3142 3272 0 324 240 0 0 chr4 7234024 7234124 -195094223 + (TG)n Simple_repeat Simple_repeat 1 100 0 219 389 45 54 chr4 7234612 7234833 -195093514 - L2 LINE L2 -97 3175 2957 303 353 17 8 chr4 7234894 7235013 -195093334 + L2 LINE L2 3133 3252 -20 295 278 0 75 chr4 7235600 7235733 -195092614 + MIR SINE MIR 28 150 -112 283 339 85 12 chr4 7235766 7235931 -195092416 - MIR SINE MIR -50 212 36 796 160 42 61 chr4 7236217 7236429 -195091918 + MLT2D LTR ERVL 207 414 0 190 365 12 12 chr4 7236481 7236566 -195091781 - MIR SINE MIR -134 128 44 1843 149 3 10 chr4 7236644 7236940 -195091407 - AluJb SINE Alu -10 302 9 2176 101 0 13 chr4 7237568 7237875 -195090472 + AluSx SINE Alu 1 303 -9 264 358 47 0 chr4 7239023 7239171 -195089176 - MIR SINE MIR -21 241 87 317 295 74 58 chr4 7239863 7240053 -195088294 + MIR SINE MIR 15 207 -55 246 211 21 21 chr4 7240143 7240238 -195088109 + C-rich Low_complexity Low_complexity 3 97 0 296 359 8 0 chr4 7242298 7242429 -195085918 + Charlie8 DNA MER1_type 84 215 -2202 545 218 316 15 chr4 7242705 7242817 -195085530 + L2 LINE L2 2347 2424 -890 486 0 0 0 chr4 7242817 7242871 -195085476 + (TC)n Simple_repeat Simple_repeat 1 54 0 369 0 0 0 chr4 7242870 7242911 -195085436 + (CA)n Simple_repeat Simple_repeat 1 41 0 * 545 218 316 15 chr4 7242871 7243133 -195085214 + L2 LINE L2 2424 2782 -532 420 380 121 13 chr4 7243589 7244037 -195084310 + L2 LINE L2 2815 3310 -3 257 250 50 75 chr4 7244551 7244680 -195083667 + L1ME4a LINE L1 5965 6091 -30 509 189 0 0 chr4 7244680 7244770 -195083577 - L1MA10 LINE L1 -2 6332 6243 257 250 50 75 chr4 7244770 7244800 -195083547 + L1ME4a LINE L1 6091 6120 -1 299 307 23 0 chr4 7244927 7245015 -195083332 - MIR SINE MIR -56 206 117 387 307 92 7 chr4 7245044 7245197 -195083150 + MIR SINE MIR 31 196 -66 205 179 0 128 chr4 7245667 7245745 -195082602 + L2 LINE L2 3016 3083 -189 2163 122 10 0 chr4 7245757 7246061 -195082286 - AluSx SINE Alu -5 307 1 231 235 0 0 chr4 7246187 7246238 -195082109 - MIR SINE MIR -1 261 211 2413 252 45 57 chr4 7246240 7247723 -195080624 + L1ME LINE L1 10 1472 -4608 1988 109 29 29 chr4 7247723 7248035 -195080312 + AluSq SINE Alu 1 312 -1 2413 252 45 57 chr4 7248035 7248051 -195080296 + L1ME LINE L1 1472 1487 -4593 181 265 286 0 chr4 7248070 7248168 -195080179 - MIR SINE MIR -74 188 63 891 235 28 12 chr4 7248553 7248800 -195079547 + MLT1C LTR MaLR 1 251 -216 356 105 0 0 chr4 7248814 7248871 -195079476 + Alu SINE Alu 1 57 -245 1011 214 5 9 chr4 7248877 7249101 -195079246 + MLT1C LTR MaLR 245 467 0 346 286 20 82 chr4 7249258 7249405 -195078942 + MIR SINE MIR 54 191 -71 765 284 47 17 chr4 7249870 7250106 -195078241 - MIR SINE MIR -11 251 9 247 270 37 10 chr4 7251437 7251538 -195076809 + MIR3 SINE MIR 57 162 -46 306 214 107 24 chr4 7252040 7252124 -195076223 + MIR SINE MIR 45 135 -73 1157 156 6 0 chr4 7252249 7252429 -195075918 + L1MB4 LINE L1 6000 6180 0 1018 282 133 16 chr4 7252429 7252939 -195075408 - L2 LINE L2 -5 3308 2747 1449 191 2 97 chr4 7253233 7253658 -195074689 - L1MB5 LINE L1 0 6174 5790 318 337 101 18 chr4 7254225 7254394 -195073953 + MER5A DNA MER1_type 7 189 0 325 248 155 19 chr4 7254427 7254588 -195073759 + MIR SINE MIR 80 262 0 226 304 0 0 chr4 7254743 7254799 -195073548 + MIR SINE MIR 111 166 -96 413 313 101 0 chr4 7255175 7255392 -195072955 + L2 LINE L2 2539 2777 -537 373 366 52 0 chr4 7255485 7255657 -195072690 - L2 LINE L2 0 3272 3092 194 250 62 0 chr4 7256540 7256604 -195071743 - MIR SINE MIR -81 181 114 283 348 18 9 chr4 7256807 7256919 -195071428 - MIR SINE MIR -42 220 108 354 245 23 23 chr4 7256976 7257139 -195071208 + MER63 DNA MER1_type 39 1679 -9 377 241 0 0 chr4 7257165 7257244 -195071103 + MER63 DNA MER1_type 977 1055 -5 522 251 95 6 chr4 7257824 7258003 -195070344 + MIR SINE MIR 9 203 -59 2487 266 57 23 chr4 7258015 7259443 -195068904 + L1ME1 LINE L1 4665 6140 -26 271 262 0 0 chr4 7260285 7260346 -195068001 + Charlie1 DNA MER1_type 1 61 -2700 1688 148 64 27 chr4 7260353 7260757 -195067590 + Charlie1 DNA MER1_type 2343 2761 0 630 283 5 56 chr4 7262095 7262293 -195066054 + MIR SINE MIR 6 193 -69 268 178 27 14 chr4 7262652 7262725 -195065622 + CT-rich Low_complexity Low_complexity 1 74 0 284 337 91 30 chr4 7262752 7262978 -195065369 - L2 LINE L2 -37 3235 2994 1980 100 0 0 chr4 7263814 7264085 -195064262 + AluSx SINE Alu 40 310 -2 288 246 36 17 chr4 7264136 7264238 -195064109 + MIR3 SINE MIR 14 117 -114 182 245 147 39 chr4 7264784 7264886 -195063461 - MER5A DNA MER1_type -30 159 47 540 327 25 15 chr4 7265064 7265266 -195063081 + MIR SINE MIR 36 239 -23 378 294 94 31 chr4 7265298 7265458 -195062889 - MIR SINE MIR -32 230 61 211 343 0 0 chr4 7266253 7266326 -195062021 - MIR SINE MIR -10 252 180 1641 125 3 96 chr4 7266643 7266987 -195061360 + AluSx SINE Alu 1 312 0 970 233 146 46 chr4 7266997 7267399 -195060948 + MLT1D LTR MaLR 31 451 -16 2097 98 7 19 chr4 7267587 7267894 -195060453 - AluSx SINE Alu -9 303 1 1375 205 91 3 chr4 7268029 7268326 -195060021 + MER33 DNA MER1_type 1 323 -1 249 337 123 6 chr4 7268784 7268947 -195059400 - MER5A DNA MER1_type -1 188 7 218 350 26 17 chr4 7269876 7269993 -195058354 - MIR SINE MIR -58 150 33 266 293 116 0 chr4 7270003 7270150 -195058197 + L2 LINE L2 2894 3057 -215 638 250 0 73 chr4 7270962 7271036 -195057311 - MIR SINE MIR -50 212 134 1858 130 0 11 chr4 7271036 7271366 -195056981 - AluJb SINE Alu 0 327 1 638 250 0 73 chr4 7271366 7271482 -195056865 - MIR SINE MIR -128 134 35 2488 65 0 0 chr4 7271739 7272046 -195056301 - AluY SINE Alu -4 307 1 213 159 0 0 chr4 7272145 7272189 -195056158 + MIR SINE MIR 178 221 -41 247 354 27 4 chr4 7272470 7272627 -195055720 - MIR SINE MIR -16 246 84 213 288 45 0 chr4 7272698 7272764 -195055583 - MIR SINE MIR -95 113 45 2119 151 11 3 chr4 7272896 7273247 -195055100 + MLT1A1 LTR MaLR 12 365 0 376 351 0 6 chr4 7273360 7273534 -195054813 + (CA)n Simple_repeat Simple_repeat 1 173 0 227 293 40 10 chr4 7273950 7274049 -195054298 - MIR SINE MIR -127 135 34 402 21 0 0 chr4 7274265 7274312 -195054035 + (TG)n Simple_repeat Simple_repeat 2 48 0 212 329 12 12 chr4 7274750 7274835 -195053512 - MIR SINE MIR -70 192 108 294 311 21 10 chr4 7274891 7275032 -195053315 + MIR SINE MIR 11 152 -69 652 298 93 0 chr4 7275904 7276162 -195052185 - L3 LINE CR1 -25 1552 1271 196 370 16 8 chr4 7276232 7276359 -195051988 + L2 LINE L2 2305 2432 -882 415 227 134 0 chr4 7276445 7276564 -195051783 - MIR SINE MIR -113 149 15 377 238 25 17 chr4 7278183 7278311 -195050036 + MIR SINE MIR 35 162 -58 372 293 67 30 chr4 7278474 7278638 -195049709 - MIR SINE MIR -78 184 15 237 247 22 56 chr4 7278989 7279078 -195049269 - L2 LINE L2 -2 3270 3185 249 226 60 12 chr4 7279237 7279321 -195049026 + MER58C DNA MER1_type 58 145 -70 1889 108 0 34 chr4 7279335 7279630 -195048717 + AluSx SINE Alu 28 312 0 352 198 49 0 chr4 7279631 7279712 -195048635 + MER58C DNA MER1_type 115 199 -16 1462 217 119 14 chr4 7279802 7280171 -195048176 - MLT1C LTR MaLR -1 466 59 261 292 7 73 chr4 7282462 7282599 -195045748 + MIR SINE MIR 24 151 -111 2642 111 16 5 chr4 7282640 7283026 -195045321 - MLT1B LTR MaLR 0 390 1 407 268 91 103 chr4 7283286 7283364 -195044983 - L2 LINE L2 -1 3312 3235 2194 112 6 6 chr4 7283364 7283676 -195044671 - AluSx SINE Alu 0 312 1 407 268 91 103 chr4 7283676 7283993 -195044354 - L2 LINE L2 -78 3235 2922 285 51 0 0 chr4 7284073 7284112 -195044235 + (TTAGGG)n Simple_repeat Simple_repeat 5 43 0 573 318 26 0 chr4 7285031 7285226 -195043121 + MIR SINE MIR 29 228 -34 490 150 42 0 chr4 7285986 7286106 -195042241 + (TG)n Simple_repeat Simple_repeat 2 126 0 350 211 56 0 chr4 7287354 7287425 -195040922 + L2 LINE L2 3197 3271 -1 257 258 61 0 chr4 7288093 7288159 -195040188 - MIR SINE MIR -70 192 123 342 265 62 37 chr4 7288931 7289093 -195039254 - MIR SINE MIR -86 176 11 1205 229 5 0 chr4 7289131 7289354 -195038993 - MER58A DNA MER1_type 0 224 1 206 246 49 0 chr4 7290098 7290159 -195038188 - MIR SINE MIR -87 121 58 308 221 213 52 chr4 7290401 7290537 -195037810 - MIR SINE MIR -91 171 14 2252 103 0 0 chr4 7290798 7291109 -195037238 + AluSx SINE Alu 1 311 -1 403 323 43 12 chr4 7291357 7291518 -195036829 + MER63A DNA MER1_type 42 207 -3 1503 186 130 6 chr4 7291962 7292284 -195036063 - MLT1A1 LTR MaLR -3 362 1 204 311 78 0 chr4 7292366 7292469 -195035878 + L2 LINE L2 2623 2733 -581 773 237 121 16 chr4 7292700 7292957 -195035390 - MER46C DNA MER2_type -29 309 26 2354 127 48 17 chr4 7292959 7293375 -195034972 + Tigger2a DNA MER2_type 1 429 -5 190 308 158 14 chr4 7293617 7293763 -195034584 + L2 LINE L2 2989 3155 -117 795 278 75 4 chr4 7293820 7294061 -195034286 - MIR SINE MIR -1 261 4 446 302 85 0 chr4 7294274 7294486 -195033861 - L1MC4a LINE L1 -1905 5903 5674 2203 125 0 0 chr4 7294504 7294816 -195033531 - AluSx SINE Alu 0 312 1 538 253 70 54 chr4 7294863 7295104 -195033243 - L1MC4a LINE L1 -2272 5536 5292 594 325 96 49 chr4 7295125 7295661 -195032686 - L1MEc LINE L1 -1033 1261 13 2198 173 8 6 chr4 7296053 7296417 -195031930 + MLT1A1 LTR MaLR 1 365 0 1030 206 55 32 chr4 7296812 7297030 -195031317 - MER58A DNA MER1_type 0 224 2 242 347 107 0 chr4 7297082 7297203 -195031144 + Charlie8 DNA MER1_type 37 170 -2247 329 314 51 22 chr4 7297525 7297662 -195030685 - MIR3 SINE MIR -4 204 64 910 306 43 10 chr4 7300951 7301343 -195027004 - LTR16C LTR ERVL -5 486 82 935 245 17 12 chr4 7302759 7303000 -195025347 - MIR SINE MIR -7 255 14 196 300 33 0 chr4 7303090 7303150 -195025197 - MIR SINE MIR -55 153 92 405 338 25 6 chr4 7303724 7303884 -195024463 + MIR SINE MIR 20 182 -80 267 349 28 9 chr4 7304490 7304599 -195023748 - MIR SINE MIR -35 227 117 2014 137 0 13 chr4 7305062 7305376 -195022971 + AluJb SINE Alu 3 312 0 828 188 7 7 chr4 7305727 7305897 -195022450 + FRAM SINE Alu 1 167 0 427 269 9 99 chr4 7306135 7306347 -195022000 + MIR SINE MIR 25 217 -45 310 339 48 0 chr4 7306604 7306728 -195021619 + MIR SINE MIR 89 218 -44 202 289 66 0 chr4 7306914 7306990 -195021357 - MIR SINE MIR -77 185 105 189 0 0 0 chr4 7307675 7307696 -195020651 + (CCCCCA)n Simple_repeat Simple_repeat 3 23 0 248 322 11 0 chr4 7307876 7307963 -195020384 + MIR SINE MIR 43 130 -132 343 306 30 0 chr4 7308303 7308437 -195019910 - MIR SINE MIR -12 250 113 492 137 0 14 chr4 7308437 7308510 -195019837 + AluS SINE Alu 2 73 -240 21 0 0 0 chr4 7309588 7309609 -195018738 + AT_rich Low_complexity Low_complexity 1 21 0 394 331 7 22 chr4 7310246 7310385 -195017962 + MIR SINE MIR 9 145 -117 198 318 91 0 chr4 7311101 7311189 -195017158 + L2 LINE L2 3214 3309 -4 * 343 305 49 58 chr4 7311185 7311408 -195016939 + L2 LINE L2 3022 3242 -30 243 125 0 0 chr4 7312670 7312710 -195015637 - MIR SINE MIR -62 146 107 796 274 69 17 chr4 7314354 7314881 -195013466 + MLT1H1 LTR MaLR 1 543 -12 216 281 0 0 chr4 7314891 7314955 -195013392 + MIR SINE MIR 77 140 -68 338 277 29 51 chr4 7316252 7316389 -195011958 + L1ME4a LINE L1 5762 5895 -226 249 321 54 9 chr4 7316404 7316516 -195011831 + L1ME4a LINE L1 5975 6091 -30 3553 194 42 45 chr4 7317032 7317081 -195011266 - Tigger6a DNA MER2_type -514 1083 1035 2169 133 3 3 chr4 7317081 7317382 -195010965 + AluSx SINE Alu 1 301 -11 3553 194 42 45 chr4 7317382 7317529 -195010818 - Tigger6a DNA MER2_type -562 1035 889 2236 117 0 7 chr4 7317529 7317828 -195010519 - AluJo SINE Alu -15 297 1 3553 194 42 45 chr4 7317828 7318400 -195009947 - Tigger6a DNA MER2_type -708 889 315 2091 146 16 11 chr4 7318400 7318763 -195009584 - MLT1A1 LTR MaLR 0 365 1 3553 194 42 45 chr4 7318763 7318854 -195009493 - Tigger6a DNA MER2_type -1282 315 225 1315 229 196 5 chr4 7319198 7319570 -195008777 - MLT1G1 LTR MaLR -2 593 151 867 176 0 0 chr4 7319817 7319959 -195008388 + AluSg/x SINE Alu 156 297 -15 453 296 145 65 chr4 7320061 7320289 -195008058 + L1ME4a LINE L1 5564 5772 -349 1862 189 40 11 chr4 7320289 7320664 -195007683 + MLT1B LTR MaLR 1 386 -4 453 296 145 65 chr4 7320664 7320945 -195007402 + L1ME4a LINE L1 5772 6114 -7 498 217 99 41 chr4 7321483 7321728 -195006619 + MLT1I LTR MaLR 1 205 -204 265 327 13 27 chr4 7322088 7322238 -195006109 - MIR SINE MIR -51 211 64 1911 108 0 15 chr4 7322403 7322663 -195005684 + AluSx SINE Alu 55 310 -2 395 315 138 26 chr4 7322665 7323056 -195005291 + L1MC5 LINE L1 7454 7888 -73 476 259 146 23 chr4 7324153 7324373 -195003974 + MIR SINE MIR 7 253 -9 459 289 115 24 chr4 7375040 7375293 -194953054 - LTR16C LTR ERVL -108 383 108 2341 98 0 3 chr4 7375293 7375600 -194952747 - AluSx SINE Alu -5 307 2 360 257 110 7 chr4 7375605 7375741 -194952606 + MER31-int LTR ERV1 3155 3304 -1632 261 263 113 45 chr4 7376100 7376233 -194952114 + MIR SINE MIR 51 192 -70 1967 198 55 34 chr4 7376386 7376600 -194951747 - MER66B LTR ERV1 -2 484 276 1912 58 91 0 chr4 7376600 7376841 -194951506 - AluSg SINE Alu -47 263 1 1967 198 55 34 chr4 7376841 7377100 -194951247 - MER66B LTR ERV1 -210 276 1 245 29 29 0 chr4 7377667 7377701 -194950646 + (CA)n Simple_repeat Simple_repeat 2 36 0 381 280 11 0 chr4 7377702 7377795 -194950552 + L2 LINE L2 3206 3299 -14 233 225 56 45 chr4 7379088 7379177 -194949170 + MLT1K LTR MaLR 337 426 -162 356 339 24 2 chr4 7379361 7379499 -194948848 + MIR SINE MIR 11 143 -65 428 220 10 0 chr4 7379682 7379782 -194948565 + L1MB3 LINE L1 5639 5739 -432 2315 85 10 0 chr4 7379782 7380077 -194948270 + AluSg SINE Alu 1 298 -12 1483 174 21 76 chr4 7380079 7380282 -194948065 + L1MB3 LINE L1 5823 5997 -186 2250 86 0 0 chr4 7380282 7380572 -194947775 - AluSx SINE Alu -22 290 1 1483 174 21 76 chr4 7380572 7380748 -194947599 + L1MB3 LINE L1 5997 6181 -2 26 64 0 0 chr4 7383223 7383270 -194945077 + GC_rich Low_complexity Low_complexity 1 47 0 234 0 0 0 chr4 7385889 7385915 -194942432 + (CA)n Simple_repeat Simple_repeat 2 27 0 310 313 12 0 chr4 7388347 7388430 -194939917 - L1M4c LINE L1 -1352 5605 5522 8555 247 48 30 chr4 7388432 7388834 -194939513 - L1M4c LINE L1 -1478 5479 5085 2630 62 0 3 chr4 7388834 7389141 -194939206 - AluY SINE Alu -5 306 1 8555 247 48 30 chr4 7389141 7391673 -194936674 - L1M4c LINE L1 -1872 5085 2350 2350 117 3 0 chr4 7391673 7391980 -194936367 - AluSx SINE Alu -4 308 1 8555 247 48 30 chr4 7391980 7393135 -194935212 - L1M4c LINE L1 -4607 2350 1217 21 0 0 0 chr4 7393140 7393161 -194935186 + AT_rich Low_complexity Low_complexity 1 21 0 2235 96 4 0 chr4 7393163 7393444 -194934903 + AluSx SINE Alu 1 282 -30 364 280 38 0 chr4 7393457 7393573 -194934774 - L1M4c LINE L1 -1339 7514 2527 329 348 0 0 chr4 7393493 7393582 -194934765 + L1MC4 LINE L1 6614 6702 -1340 * 321 230 81 0 chr4 7393715 7393789 -194934558 - L1M4c LINE L1 -4355 2602 2523 * 326 274 0 53 chr4 7393776 7393871 -194934476 - L1MC4 LINE L1 -1339 6703 6614 262 333 130 10 chr4 7393871 7394063 -194934284 - L1M4c LINE L1 -5612 1243 1029 373 271 50 71 chr4 7394332 7394572 -194933775 - L1M4c LINE L1 -6614 245 11 364 273 36 43 chr4 7394681 7394820 -194933527 - MIR3 SINE MIR -62 146 9 1291 107 0 0 chr4 7394923 7395082 -194933265 - AluSx SINE Alu -153 159 1 2240 107 13 0 chr4 7395090 7395388 -194932959 - AluSq SINE Alu -11 302 1 613 261 75 0 chr4 7395403 7395683 -194932664 + L1M4 LINE L1 3030 3330 -2816 192 305 146 12 chr4 7395908 7395990 -194932357 + L2 LINE L2 3180 3272 0 530 231 31 0 chr4 7396163 7396293 -194932054 + MLT1C-int LTR MaLR 1238 1371 0 744 199 65 15 chr4 7396293 7396494 -194931853 + MLT1C LTR MaLR 1 211 -256 2523 173 29 13 chr4 7396522 7396978 -194931369 - MLT1C LTR MaLR 0 467 5 2941 194 9 5 chr4 7397268 7397824 -194930523 - L1MB3 LINE L1 0 6183 5626 231 217 0 0 chr4 7398341 7398401 -194929946 + (CA)n Simple_repeat Simple_repeat 1 60 0 2417 89 3 19 chr4 7399082 7399396 -194928951 - AluSq SINE Alu -4 309 1 309 159 0 43 chr4 7400165 7400234 -194928113 - MLT1F1 LTR MaLR 0 567 502 417 305 96 6 chr4 7400234 7400583 -194927764 - L1MB3 LINE L1 -655 5507 5126 439 119 0 0 chr4 7400621 7400680 -194927667 + AluS SINE Alu 2 60 -250 1403 139 5 14 chr4 7400723 7400938 -194927409 + AluSg/x SINE Alu 68 280 -32 948 74 7 20 chr4 7400940 7401089 -194927258 + (GAAA)n Simple_repeat Simple_repeat 2 148 0 455 309 14 34 chr4 7401089 7401296 -194927051 - L1MB3 LINE L1 -1059 5087 4885 394 317 70 20 chr4 7401386 7401585 -194926762 + L1MC4a LINE L1 5681 5889 -1919 2372 101 3 0 chr4 7401587 7401895 -194926452 + AluSq SINE Alu 1 309 -4 2146 98 7 18 chr4 7401897 7402231 -194926116 + AluSq SINE Alu 1 331 0 366 255 35 41 chr4 7402616 7402761 -194925586 - L1ME4a LINE L1 -12 6109 5966 4048 80 51 0 chr4 7402908 7403435 -194924912 + MER41A LTR ERV1 1 554 0 4301 212 97 65 chr4 7403520 7405374 -194922973 + MER41A-int LTR ERV1 1 2017 -3929 330 59 59 0 chr4 7405370 7405421 -194922926 + MER41A-int LTR ERV1 2167 2220 -3726 * 3134 123 62 46 chr4 7405417 7405824 -194922523 + MER41A-int LTR ERV1 3355 3754 -4062 2280 112 0 3 chr4 7405824 7406119 -194922228 + AluSg SINE Alu 1 294 -16 3134 123 62 46 chr4 7406119 7406222 -194922125 + MER41A-int LTR ERV1 3754 3854 -3962 2192 126 7 0 chr4 7406222 7406523 -194921824 + AluSq SINE Alu 1 303 -10 3134 123 62 46 chr4 7406523 7406551 -194921796 + MER41A-int LTR ERV1 3854 3880 -3936 2190 122 0 7 chr4 7406551 7406847 -194921500 + AluSx SINE Alu 1 294 -18 3134 123 62 46 chr4 7406847 7407228 -194921119 + MER41A-int LTR ERV1 3880 4417 -3399 11498 85 32 26 chr4 7407262 7407886 -194920461 + MER41A-int LTR ERV1 4191 4810 -1136 1975 167 0 0 chr4 7407886 7408180 -194920167 + AluSx SINE Alu 1 294 -18 11498 85 32 26 chr4 7408180 7409299 -194919048 + MER41A-int LTR ERV1 4810 5944 -2 4013 85 43 0 chr4 7409299 7409830 -194918517 + MER41A LTR ERV1 1 554 0 922 120 6 78 chr4 7410266 7410433 -194917914 + FRAM SINE Alu 1 40 0 789 223 54 0 chr4 7410458 7410642 -194917705 + MER58A DNA MER1_type 3 196 -28 260 281 152 22 chr4 7410856 7411126 -194917221 + LTR16A LTR ERVL 146 450 0 592 301 15 41 chr4 7411149 7411415 -194916932 - L2 LINE L2 -528 2786 2528 2212 95 3 0 chr4 7411506 7411856 -194916491 + AluSx SINE Alu 1 351 0 1164 216 137 51 chr4 7412066 7412556 -194915791 - LTR55 LTR ERV -16 532 1 330 310 75 12 chr4 7412565 7412900 -194915447 + L1 LINE L1 4295 4650 -1496 265 169 31 31 chr4 7412979 7413044 -194915303 + L1ME LINE L1 5714 5778 -343 857 172 0 0 chr4 7413071 7413205 -194915142 + AluJo SINE Alu 3 136 -176 6183 115 11 8 chr4 7413212 7414312 -194914035 + L1P4 LINE L1 4352 5457 -711 306 111 0 0 chr4 7414413 7414458 -194913889 - Alu SINE Alu -254 45 1 2120 74 0 40 chr4 7414486 7414782 -194913565 + AluSx SINE Alu 1 284 -28 1383 68 0 62 chr4 7414782 7414818 -194913529 + AluSq SINE Alu 1 320 0 192 305 12 24 chr4 7415555 7415637 -194912710 - MIR SINE MIR -118 144 64 1090 272 100 37 chr4 7415819 7416301 -194912046 + MLT1E3 LTR MaLR 1 512 -112 238 219 0 47 chr4 7416302 7416366 -194911981 - MIR SINE MIR -66 196 136 36 73 0 10 chr4 7417026 7417052 -194911295 + GC_rich Low_complexity Low_complexity 1 26 -69 198 71 0 0 chr4 7417052 7417080 -194911267 + (CAG)n Simple_repeat Simple_repeat 1 28 0 36 73 0 10 chr4 7417080 7417149 -194911198 + GC_rich Low_complexity Low_complexity 26 95 0 217 267 0 67 chr4 7417187 7417322 -194911025 + G-rich Low_complexity Low_complexity 1 126 0 23 92 0 0 chr4 7417327 7417392 -194910955 + GC_rich Low_complexity Low_complexity 1 65 0 267 278 121 52 chr4 7418701 7418874 -194909473 + MIR3 SINE MIR 4 188 -20 1148 196 64 38 chr4 7418930 7419196 -194909151 + AluJb SINE Alu 1 273 -39 486 193 12 30 chr4 7419196 7419362 -194908985 + GA-rich Low_complexity Low_complexity 2 164 0 419 250 9 15 chr4 7419375 7419702 -194908645 + GA-rich Low_complexity Low_complexity 1 325 0 848 238 188 18 chr4 7420529 7420928 -194907419 - MLT1J LTR MaLR -32 479 13 314 262 58 29 chr4 7421081 7421184 -194907163 - MIR SINE MIR -110 152 47 952 243 56 31 chr4 7421242 7421652 -194906695 - MLT1D LTR MaLR -12 493 35 1768 114 144 0 chr4 7422160 7422424 -194905923 - AluSx SINE Alu 0 302 1 221 335 47 0 chr4 7423162 7423332 -194905015 + (CCCTG)n Simple_repeat Simple_repeat 1 178 0 205 196 0 22 chr4 7423618 7423664 -194904683 + (TGG)n Simple_repeat Simple_repeat 1 45 0 1994 139 0 3 chr4 7425413 7425707 -194902640 - AluJb SINE Alu -9 303 11 283 200 27 27 chr4 7425708 7425783 -194902564 + MIR SINE MIR 101 175 -87 1800 245 54 4 chr4 7425786 7426305 -194902042 + L1MB8 LINE L1 5625 6169 -9 2623 42 0 0 chr4 7426308 7426617 -194901730 - AluY SINE Alu -2 309 1 263 315 22 0 chr4 7426664 7426756 -194901591 - L2 LINE L2 -1 3312 3219 342 339 24 42 chr4 7426826 7426994 -194901353 - MIR SINE MIR -91 171 7 1167 213 84 3 chr4 7427260 7427556 -194900791 + MLT1C LTR MaLR 140 459 -8 2111 92 0 7 chr4 7427978 7428297 -194900050 + AluSx SINE Alu 1 317 0 1559 213 33 0 chr4 7428303 7428603 -194899744 + AluJb SINE Alu 3 312 0 311 253 208 7 chr4 7428692 7428846 -194899501 + MER117 DNA MER1_type 3 187 -10 1693 189 10 93 chr4 7429686 7430094 -194898253 + MLT1A2 LTR MaLR 1 374 0 2405 57 0 13 chr4 7430200 7430499 -194897848 - AluY SINE Alu -16 295 1 391 287 20 108 chr4 7430663 7430914 -194897433 + L2 LINE L2 2953 3181 -91 441 323 72 7 chr4 7431228 7431451 -194896896 - MIR SINE MIR 0 262 20 193 410 119 11 chr4 7431666 7431927 -194896420 - L2 LINE L2 -345 2969 2681 191 322 34 0 chr4 7432377 7432436 -194895911 - L2 LINE L2 -5 3267 3207 426 289 72 4 chr4 7432491 7432726 -194895621 - LTR33 LTR ERVL -36 485 235 631 246 7 0 chr4 7432736 7432878 -194895469 + MLT1C LTR MaLR 321 463 -4 1965 185 45 9 chr4 7433496 7433940 -194894407 - MLT1C LTR MaLR -7 460 1 267 241 207 31 chr4 7435127 7435250 -194893097 - MIR SINE MIR -45 163 24 1106 162 33 50 chr4 7435463 7435704 -194892643 - L1MA6 LINE L1 -2 6298 6062 313 130 4 2 chr4 7435704 7435953 -194892394 + AluJo SINE Alu 1 302 0 373 194 153 0 chr4 7435956 7436054 -194892293 - L1MA6 LINE L1 -225 6075 5963 2135 96 7 0 chr4 7436065 7436377 -194891970 - AluSg SINE Alu 0 314 1 1788 158 5 25 chr4 7436381 7436749 -194891598 - L1MA6 LINE L1 -871 5275 4915 1852 152 0 26 chr4 7437552 7437855 -194890492 + AluSx SINE Alu 1 295 -17 1365 208 31 0 chr4 7437860 7438177 -194890170 + MLT1C LTR MaLR 1 327 -140 * 1421 236 43 10 chr4 7438163 7438561 -194889786 + MER67A LTR ERV1 5 415 -128 696 117 175 73 chr4 7438563 7438700 -194889647 + AluJo SINE Alu 1 151 -161 552 103 0 0 chr4 7438723 7438801 -194889546 - AluJb SINE Alu -81 231 154 304 264 73 139 chr4 7438850 7439290 -194889057 + L2 LINE L2 2844 3254 -18 258 106 0 0 chr4 7439292 7439339 -194889008 + (TGAA)n Simple_repeat Simple_repeat 2 48 0 364 355 49 16 chr4 7439786 7439969 -194888378 - L1ME4a LINE L1 -8 6113 5925 715 156 117 0 chr4 7440123 7440251 -194888096 + FLAM_C SINE Alu 1 143 0 575 115 52 125 chr4 7440375 7440567 -194887780 - MER53 DNA DNA -11 178 1 186 229 0 71 chr4 7440738 7440808 -194887539 - L2 LINE L2 -1 3312 3248 220 318 56 19 chr4 7440886 7440993 -194887354 + L2 LINE L2 3160 3270 -2 509 121 61 0 chr4 7442141 7442306 -194886041 + (TG)n Simple_repeat Simple_repeat 1 175 0 252 161 69 11 chr4 7442319 7442406 -194885941 + (TG)n Simple_repeat Simple_repeat 2 93 0 1673 170 4 0 chr4 7442857 7443128 -194885219 - AluSq SINE Alu -18 295 24 269 306 119 38 chr4 7443268 7443428 -194884919 + L2 LINE L2 2923 3095 -177 182 234 0 21 chr4 7444360 7444407 -194883940 - MIR SINE MIR -126 82 37 365 244 76 34 chr4 7445590 7445709 -194882638 + MIR SINE MIR 40 163 -99 304 315 100 15 chr4 7446371 7446501 -194881846 + MIR SINE MIR 52 192 -70 345 263 72 105 chr4 7446791 7446871 -194881476 + L2 LINE L2 3105 3186 -127 877 207 18 62 chr4 7446871 7447098 -194881249 - MER20 DNA MER1_type -2 217 1 345 263 72 105 chr4 7447098 7447226 -194881121 + L2 LINE L2 3186 3306 -7 222 142 62 7 chr4 7447266 7447330 -194881017 - MIR SINE MIR -62 146 108 182 290 16 32 chr4 7448502 7448564 -194879783 + L2 LINE L2 2718 2778 -536 * 558 217 45 18 chr4 7448546 7448691 -194879656 + MIR SINE MIR 33 170 -54 330 237 21 54 chr4 7449565 7449658 -194878689 + L2 LINE L2 3156 3245 -27 297 311 85 28 chr4 7450421 7450598 -194877749 - MIR SINE MIR -63 199 13 637 241 11 43 chr4 7450735 7450922 -194877425 - MIR SINE MIR -51 211 31 611 217 22 0 chr4 7451994 7452132 -194876215 + L1ME1 LINE L1 6025 6165 -1 1846 147 39 23 chr4 7452169 7452340 -194876007 - AluSx SINE Alu 0 312 132 207 0 0 0 chr4 7452340 7452363 -194875984 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1846 147 39 23 chr4 7452363 7452498 -194875849 - AluSx SINE Alu -180 132 1 631 373 71 0 chr4 7452498 7452755 -194875592 - L1M4 LINE L1 -2630 3516 3238 2159 126 7 0 chr4 7453401 7453711 -194874636 + AluSx SINE Alu 1 312 0 220 291 29 68 chr4 7453959 7454062 -194874285 - MIR3 SINE MIR -52 156 58 * 287 243 27 63 chr4 7454029 7454140 -194874207 + L2 LINE L2 3152 3258 -14 258 132 0 73 chr4 7454294 7454362 -194873985 + (CCCCG)n Simple_repeat Simple_repeat 1 63 0 295 253 87 105 chr4 7455398 7455675 -194872672 + L2 LINE L2 2813 3084 -188 2198 109 0 0 chr4 7455882 7456175 -194872172 - AluSx SINE Alu -19 293 1 1981 85 48 4 chr4 7456753 7457049 -194871298 - AluSq SINE Alu 0 308 1 1813 164 0 22 chr4 7457255 7457567 -194870780 + AluJb SINE Alu 1 305 -7 2068 110 7 3 chr4 7457576 7457868 -194870479 + AluSq SINE Alu 1 293 -20 242 73 24 0 chr4 7458781 7458822 -194869525 + (TG)n Simple_repeat Simple_repeat 1 42 0 367 345 79 0 chr4 7459016 7459181 -194869166 + MIR SINE MIR 48 225 -37 326 200 124 57 chr4 7460054 7460159 -194868188 + L2 LINE L2 3174 3285 -28 306 0 0 0 chr4 7460179 7460213 -194868134 + (TGAA)n Simple_repeat Simple_repeat 2 35 0 180 0 0 0 chr4 7460841 7460861 -194867486 + (CAAAA)n Simple_repeat Simple_repeat 3 22 0 2468 123 31 14 chr4 7460863 7461221 -194867126 + THE1B LTR MaLR 1 364 0 275 315 120 0 chr4 7461763 7461871 -194866476 + L2 LINE L2 3144 3264 -8 329 298 168 8 chr4 7462231 7462362 -194865985 + L1ME4a LINE L1 5953 6104 -17 195 281 42 10 chr4 7462761 7462857 -194865490 - MIR SINE MIR -77 131 33 1576 180 68 22 chr4 7462957 7463025 -194865322 + MLT1B LTR MaLR 3 66 -324 1133 106 0 150 chr4 7463025 7463252 -194865095 - 7SK RNA RNA 0 193 1 1576 180 68 22 chr4 7463252 7463538 -194864809 + MLT1B LTR MaLR 66 373 -17 271 303 110 0 chr4 7463560 7463715 -194864632 - L3 LINE CR1 -111 1466 1295 199 305 63 21 chr4 7463798 7463893 -194864454 - L2 LINE L2 -212 3101 3003 1648 177 7 7 chr4 7463928 7464227 -194864120 - AluJo SINE Alu -12 300 2 182 37 37 0 chr4 7464227 7464254 -194864093 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 1722 144 38 17 chr4 7464299 7464590 -194863757 - AluJo SINE Alu -15 297 1 2153 51 44 7 chr4 7465362 7465671 -194862676 - AluY SINE Alu 0 319 1 1375 154 4 0 chr4 7465705 7465975 -194862372 - AluSx SINE Alu 0 328 58 429 288 11 33 chr4 7466205 7466432 -194861915 + CT-rich Low_complexity Low_complexity 1 222 0 467 266 0 12 chr4 7466698 7466867 -194861480 + GA-rich Low_complexity Low_complexity 1 167 0 457 309 53 0 chr4 7466976 7467128 -194861219 - MIR SINE MIR -73 189 30 264 308 98 49 chr4 7467535 7467821 -194860526 - L2 LINE L2 -52 3220 2921 * 338 280 150 24 chr4 7467818 7468025 -194860322 - L2 LINE L2 -529 2785 2553 180 367 60 60 chr4 7468498 7468697 -194859650 - L2 LINE L2 -42 3230 3032 410 288 88 12 chr4 7468733 7468903 -194859444 - MIR SINE MIR 0 262 80 193 331 39 47 chr4 7468880 7469007 -194859340 + MIR SINE MIR 41 166 -96 * 566 208 101 0 chr4 7468986 7469135 -194859212 + MER5A DNA MER1_type 26 189 0 427 282 63 14 chr4 7469156 7469298 -194859049 + MER5B DNA MER1_type 14 162 -16 613 219 27 27 chr4 7470247 7470393 -194857954 - L2 LINE L2 -1 3312 3167 236 360 56 8 chr4 7470728 7470853 -194857494 - L2 LINE L2 -39 3233 3103 436 306 19 32 chr4 7470964 7471121 -194857226 - MIR SINE MIR -99 163 9 963 213 54 77 chr4 7471668 7471710 -194856637 - MLT1A1 LTR MaLR -20 345 304 1664 171 0 49 chr4 7471710 7472015 -194856332 + AluJb SINE Alu 1 290 -22 963 213 54 77 chr4 7472015 7472325 -194856022 - MLT1A1 LTR MaLR -61 304 1 463 272 48 0 chr4 7472488 7472613 -194855734 + MIR SINE MIR 96 226 -36 189 238 0 0 chr4 7472935 7472977 -194855370 + MIR SINE MIR 112 153 -55 241 250 65 9 chr4 7473064 7473172 -194855175 - MER103 DNA DNA -47 119 6 231 342 40 20 chr4 7473433 7473582 -194854765 - L2 LINE L2 -527 2787 2636 404 211 22 0 chr4 7473763 7473853 -194854494 - MLT1I LTR MaLR -1 408 317 372 248 90 8 chr4 7473945 7474078 -194854269 - MLT1J2 LTR MaLR -240 210 67 382 287 16 25 chr4 7474939 7475061 -194853286 + L2 LINE L2 3180 3300 -13 777 79 0 0 chr4 7475061 7475175 -194853172 + (TGGA)n Simple_repeat Simple_repeat 1 114 0 231 250 14 14 chr4 7475658 7475730 -194852617 + LTR16C LTR ERVL 418 489 -2 298 289 12 0 chr4 7475767 7475850 -194852497 - L2 LINE L2 -276 3037 2954 757 245 0 16 chr4 7475850 7476042 -194852305 - MLT1A1 LTR MaLR 0 365 177 1489 133 3 98 chr4 7476043 7476428 -194851919 - MER4A LTR ERV1 0 664 257 375 165 94 0 chr4 7476428 7476513 -194851834 - MER4A LTR ERV1 -571 93 1 * 745 234 5 11 chr4 7476513 7476693 -194851654 - MLT1A1 LTR MaLR -186 179 1 1418 242 35 113 chr4 7476694 7477272 -194851075 - L2 LINE L2 -359 2955 2423 1654 261 60 12 chr4 7477479 7477961 -194850386 - MLT1D LTR MaLR 0 505 1 438 339 63 27 chr4 7478432 7478653 -194849694 - MIR SINE MIR -6 256 28 735 191 35 30 chr4 7478919 7479118 -194849229 + MLT2D LTR ERVL 208 407 -7 362 270 40 24 chr4 7479120 7479246 -194849101 + L1MC4 LINE L1 7785 7912 -130 237 234 0 0 chr4 7479246 7479293 -194849054 + (TG)n Simple_repeat Simple_repeat 2 48 0 321 299 76 35 chr4 7479313 7479457 -194848890 + L1MC4 LINE L1 6595 6744 -1298 303 248 38 29 chr4 7481048 7481153 -194847194 + L1ME3A LINE L1 5664 5769 -401 469 246 12 76 chr4 7481160 7481331 -194847016 + L1ME3A LINE L1 6006 6165 -5 929 160 7 7 chr4 7481378 7481528 -194846819 + FRAM SINE Alu 2 151 -15 339 403 31 13 chr4 7481825 7482143 -194846204 + L1MC/D LINE L1 5449 5772 -2036 2426 59 0 3 chr4 7482198 7482501 -194845846 + AluY SINE Alu 1 302 -9 798 96 52 0 chr4 7483535 7483650 -194844697 - L1PA11 LINE L1 0 6174 6054 520 259 109 10 chr4 7483698 7483899 -194844448 + MLT1C LTR MaLR 240 460 -7 843 155 20 85 chr4 7485221 7485306 -194843041 - MLT1B LTR MaLR -203 187 98 2246 119 0 0 chr4 7485306 7485616 -194842731 - AluSx SINE Alu -2 310 1 843 155 20 85 chr4 7485616 7485730 -194842617 - MLT1B LTR MaLR -292 98 1 760 321 4 20 chr4 7486428 7486680 -194841667 + MIR SINE MIR 15 262 0 1958 184 34 50 chr4 7487855 7488273 -194840074 - MLT2D LTR ERVL 0 414 4 475 253 266 0 chr4 7488680 7488838 -194839509 - MIR SINE MIR -25 237 38 499 146 115 0 chr4 7489006 7489102 -194839245 + MER53 DNA DNA 1 107 -82 208 254 111 0 chr4 7489450 7489513 -194838834 + MIR SINE MIR 113 182 -80 591 258 82 6 chr4 7489945 7490104 -194838243 + MIR SINE MIR 44 214 -48 536 342 127 39 chr4 7490234 7490515 -194837832 - L1ME4a LINE L1 -109 6012 5757 2444 53 0 13 chr4 7490515 7490818 -194837529 - AluY SINE Alu -12 299 1 536 342 127 39 chr4 7490818 7491011 -194837336 - L1ME4a LINE L1 -364 5757 5485 23 68 0 0 chr4 7491154 7491198 -194837149 + AT_rich Low_complexity Low_complexity 1 44 0 301 310 84 40 chr4 7491626 7491724 -194836623 + L1M4 LINE L1 2924 3016 -3130 2162 106 3 3 chr4 7491724 7492026 -194836321 - AluSc SINE Alu -7 302 1 301 310 84 40 chr4 7492026 7492472 -194835875 + L1M4 LINE L1 3016 3492 -2654 203 79 26 0 chr4 7493240 7493278 -194835069 + (TTTTTG)n Simple_repeat Simple_repeat 2 40 0 238 121 35 35 chr4 7493297 7493355 -194834992 + GA-rich Low_complexity Low_complexity 1 58 0 428 331 95 63 chr4 7493798 7494145 -194834202 + L3 LINE CR1 1146 1503 -74 498 330 77 27 chr4 7494307 7494568 -194833779 + MLT1L LTR MaLR 101 374 -241 312 234 0 0 chr4 7495594 7495658 -194832689 - MIR SINE MIR -121 141 78 711 154 18 0 chr4 7496045 7496214 -194832133 + (TCCA)n Simple_repeat Simple_repeat 1 172 0 821 139 23 0 chr4 7496229 7496402 -194831945 + (TCCA)n Simple_repeat Simple_repeat 4 180 0 576 190 18 0 chr4 7496424 7496647 -194831700 + (TCCA)n Simple_repeat Simple_repeat 1 227 0 697 151 30 0 chr4 7496662 7496828 -194831519 + (TCCA)n Simple_repeat Simple_repeat 2 172 0 272 349 84 44 chr4 7496974 7497249 -194831098 - L2 LINE L2 -173 3099 2814 271 282 104 37 chr4 7498284 7498422 -194829925 - MIR SINE MIR -59 149 13 377 82 0 87 chr4 7498993 7499177 -194829170 + (CACCT)n Simple_repeat Simple_repeat 3 170 0 1786 143 0 0 chr4 7499271 7499529 -194828818 - AluSx SINE Alu -11 301 44 238 95 0 24 chr4 7499561 7499603 -194828744 + Alu SINE Alu 130 170 -133 2252 76 0 19 chr4 7499809 7500123 -194828224 + AluSg SINE Alu 1 308 -2 2349 63 0 16 chr4 7500594 7500897 -194827450 - AluY SINE Alu -13 298 1 238 320 0 0 chr4 7502498 7502573 -194825774 + C-rich Low_complexity Low_complexity 2 76 0 236 213 25 41 chr4 7503364 7503486 -194824861 + (CGG)n Simple_repeat Simple_repeat 2 121 0 231 123 15 77 chr4 7503548 7503678 -194824669 + (CGG)n Simple_repeat Simple_repeat 2 123 0 281 306 37 0 chr4 7504143 7504251 -194824096 - MIR SINE MIR -135 127 16 227 400 100 5 chr4 7505357 7505577 -194822770 + L2 LINE L2 2470 2710 -604 212 308 128 26 chr4 7505661 7505778 -194822569 + L2 LINE L2 2934 3062 -251 201 196 22 43 chr4 7505887 7505933 -194822414 - MIR SINE MIR -216 46 2 184 300 14 29 chr4 7506035 7506105 -194822242 + MER5A DNA MER1_type 7 75 -114 180 235 147 0 chr4 7506219 7506287 -194822060 - MER5A DNA MER1_type -95 94 17 368 378 65 5 chr4 7506492 7506693 -194821654 - MIR SINE MIR -40 222 10 554 241 106 6 chr4 7508466 7508636 -194819711 - MER5A DNA MER1_type -2 187 1 21 0 0 0 chr4 7508673 7508694 -194819653 + AT_rich Low_complexity Low_complexity 1 21 0 1911 196 102 35 chr4 7508696 7509216 -194819131 - L1MB3 LINE L1 -3 6180 5616 1880 121 15 0 chr4 7509216 7509481 -194818866 - AluJb SINE Alu -18 294 26 1911 196 102 35 chr4 7509481 7509538 -194818809 - L1MB3 LINE L1 -567 5616 5564 223 351 77 24 chr4 7511027 7511195 -194817152 + MIR SINE MIR 37 213 -49 2544 52 0 0 chr4 7511715 7512023 -194816324 - AluY SINE Alu -3 308 1 242 228 101 13 chr4 7512711 7512790 -194815557 - MIR SINE MIR -60 148 63 321 290 32 11 chr4 7513890 7513983 -194814364 + MIR SINE MIR 51 145 -63 597 213 107 6 chr4 7516988 7517157 -194811190 + MER5A DNA MER1_type 1 186 -3 24 32 0 0 chr4 7517221 7517252 -194811095 + AT_rich Low_complexity Low_complexity 1 31 0 2340 70 0 0 chr4 7517635 7517920 -194810427 + AluSc SINE Alu 3 287 -22 2158 109 0 13 chr4 7518245 7518557 -194809790 - AluSq SINE Alu -5 308 1 736 160 146 7 chr4 7518838 7518982 -194809365 + MER46A DNA MER2_type 1 164 -72 1060 167 171 42 chr4 7518997 7519284 -194809063 + MER7A DNA MER2_type 24 345 -1 334 192 55 0 chr4 7519284 7519357 -194808990 + MER46A DNA MER2_type 159 235 -1 23 0 0 0 chr4 7520211 7520234 -194808113 + AT_rich Low_complexity Low_complexity 1 23 0 472 332 142 0 chr4 7521582 7521877 -194806470 - L2 LINE L2 -982 2332 1996 228 318 114 15 chr4 7522019 7522151 -194806196 + MIR SINE MIR 13 157 -105 237 33 0 0 chr4 7522612 7522642 -194805705 + (TA)n Simple_repeat Simple_repeat 2 31 0 2276 64 0 17 chr4 7522643 7522938 -194805409 - AluY SINE Alu -21 290 1 1762 156 31 0 chr4 7523223 7523512 -194804835 - AluJb SINE Alu -14 298 1 213 108 0 0 chr4 7524614 7524651 -194803696 + (TCTA)n Simple_repeat Simple_repeat 4 40 0 1532 137 129 0 chr4 7524662 7524925 -194803422 - AluSx SINE Alu -15 297 1 809 181 29 23 chr4 7524935 7525106 -194803241 - AluJo SINE Alu -24 288 117 2109 95 3 20 chr4 7525368 7525672 -194802675 + AluSp SINE Alu 10 308 -5 1888 62 0 19 chr4 7525981 7526240 -194802107 - AluY SINE Alu -13 298 45 1474 185 10 27 chr4 7526548 7526840 -194801507 + AluJb SINE Alu 1 287 -25 319 280 110 8 chr4 7527572 7527690 -194800657 + L2 LINE L2 3143 3272 0 191 275 0 0 chr4 7527722 7527762 -194800585 - L2 LINE L2 -12 3301 3262 2293 78 0 10 chr4 7528213 7528509 -194799838 - AluSg SINE Alu -17 293 1 2306 93 0 0 chr4 7528910 7529210 -194799137 - AluSx SINE Alu -12 300 1 321 288 117 0 chr4 7529350 7529461 -194798886 + MIR3 SINE MIR 33 156 -52 316 330 69 12 chr4 7529723 7529896 -194798451 - MIR SINE MIR -64 198 16 1874 104 42 21 chr4 7530989 7531278 -194797069 - AluSc SINE Alu -14 295 1 185 313 48 0 chr4 7531772 7531855 -194796492 + MIR SINE MIR 154 240 -22 1901 120 46 0 chr4 7535377 7535661 -194792686 - AluSg SINE Alu -13 297 1 1707 184 0 9 chr4 7536079 7536394 -194791953 + AluJb SINE Alu 1 312 0 2289 89 0 3 chr4 7536494 7536796 -194791551 + AluSg SINE Alu 1 301 -9 266 190 16 38 chr4 7537026 7537210 -194791137 + (TG)n Simple_repeat Simple_repeat 1 180 0 494 199 11 43 chr4 7537302 7537488 -194790859 + (TG)n Simple_repeat Simple_repeat 1 180 0 285 198 31 43 chr4 7537442 7537604 -194790743 + (GTGTG)n Simple_repeat Simple_repeat 1 160 0 * 437 214 21 24 chr4 7537531 7537921 -194790426 + (TG)n Simple_repeat Simple_repeat 1 388 0 722 270 97 68 chr4 7537961 7537991 -194790356 + L1MC5 LINE L1 7422 7450 -511 2050 114 0 14 chr4 7537991 7538288 -194790059 - AluSg SINE Alu -17 293 1 2006 158 0 0 chr4 7538294 7538604 -194789743 - AluJb SINE Alu -2 310 1 722 270 97 68 chr4 7538604 7539062 -194789285 + L1MC5 LINE L1 7454 7931 -30 449 165 247 0 chr4 7539085 7539182 -194789165 + AluJb SINE Alu 174 294 -18 2214 104 0 10 chr4 7541936 7542245 -194786102 - AluSg1 SINE Alu -3 306 1 28 71 0 0 chr4 7543504 7543560 -194784787 + AT_rich Low_complexity Low_complexity 1 56 0 1791 182 3 0 chr4 7543601 7543903 -194784444 - AluJb SINE Alu -9 303 1 286 250 25 12 chr4 7544252 7544332 -194784015 - MIR SINE MIR -56 206 126 853 167 20 0 chr4 7544348 7544533 -194783814 + AluSg/x SINE Alu 129 316 0 2091 102 7 0 chr4 7545899 7546202 -194782145 + AluY SINE Alu 1 305 -6 25 31 0 0 chr4 7547057 7547089 -194781258 + AT_rich Low_complexity Low_complexity 1 32 0 543 267 82 19 chr4 7547242 7547448 -194780899 - MER20 DNA MER1_type 0 219 1 2475 39 0 20 chr4 7547837 7548142 -194780205 - AluY SINE Alu -12 299 1 360 333 49 27 chr4 7548209 7548434 -194779913 + MIR SINE MIR 31 260 -2 542 286 38 72 chr4 7550657 7550919 -194777428 + MER112 DNA MER1_type 2 254 -2 366 322 6 76 chr4 7551017 7551112 -194777235 - MIR3 SINE MIR -50 158 132 2092 124 3 0 chr4 7551112 7551418 -194776929 + AluSx SINE Alu 1 307 -5 366 322 6 76 chr4 7551418 7551524 -194776823 - MIR3 SINE MIR -76 132 20 2281 82 3 0 chr4 7553110 7553414 -194774933 - AluY SINE Alu -6 305 1 227 228 101 13 chr4 7554102 7554181 -194774166 - MIR SINE MIR -60 148 63 307 290 32 11 chr4 7555281 7555374 -194772973 + MIR SINE MIR 51 145 -63 597 213 107 6 chr4 7558379 7558548 -194769799 + MER5A DNA MER1_type 1 186 -3 24 32 0 0 chr4 7558612 7558643 -194769704 + AT_rich Low_complexity Low_complexity 1 31 0 2340 70 0 0 chr4 7559026 7559311 -194769036 + AluSc SINE Alu 3 287 -22 2143 109 0 13 chr4 7559636 7559948 -194768399 - AluSq SINE Alu -5 308 1 227 228 101 13 chr4 7560635 7560714 -194767633 - MIR SINE MIR -60 148 63 307 290 32 11 chr4 7561814 7561907 -194766440 + MIR SINE MIR 51 145 -63 427 181 0 36 chr4 7566629 7566712 -194761635 - FLAM SINE Alu -17 126 47 282 182 0 18 chr4 7566849 7566904 -194761443 + Alu SINE Alu 240 293 -8 605 225 0 0 chr4 7567005 7567125 -194761222 + FLAM_A SINE Alu 20 139 -3 278 245 53 0 chr4 7567365 7567459 -194760888 - L1M4 LINE L1 -2573 3573 3475 810 217 44 6 chr4 7567777 7567957 -194760390 - MER5A DNA MER1_type 0 189 3 228 255 31 51 chr4 7567969 7568067 -194760280 + L2 LINE L2 3169 3264 -49 835 234 86 111 chr4 7568416 7568665 -194759682 - L1ME LINE L1 -5156 927 673 1944 129 3 7 chr4 7568665 7568960 -194759387 + AluJb SINE Alu 1 294 -18 2041 120 3 7 chr4 7568962 7569304 -194759043 + AluSx SINE Alu 1 312 0 835 234 86 111 chr4 7569304 7569619 -194758728 - L1ME LINE L1 -5411 672 400 402 153 0 0 chr4 7570067 7570126 -194758221 + AluS SINE Alu 17 75 -238 23 0 0 0 chr4 7570429 7570452 -194757895 + AT_rich Low_complexity Low_complexity 1 23 0 280 233 55 0 chr4 7571306 7571379 -194756968 - Tigger4(Zombi) DNA MER2_type -1 2730 2654 313 257 14 0 chr4 7571379 7571453 -194756894 - Tigger3(Golem) DNA MER2_type -1 3028 2954 365 303 68 25 chr4 7571716 7571878 -194756469 + MIR SINE MIR 20 188 -74 1530 218 166 12 chr4 7572147 7572629 -194755718 + L1MC4 LINE L1 6830 7385 -657 2391 70 0 0 chr4 7572634 7572935 -194755412 + AluY SINE Alu 6 306 -5 222 149 43 0 chr4 7573249 7573296 -194755051 + MIR SINE MIR 105 153 -55 626 276 22 0 chr4 7573448 7573629 -194754718 - AluSp SINE Alu -118 195 11 667 285 45 58 chr4 7573639 7573951 -194754396 + L2 LINE L2 3006 3313 0 234 200 0 0 chr4 7573968 7574013 -194754334 + L2 LINE L2 3210 3254 -18 1440 120 0 0 chr4 7574522 7574722 -194753625 + AluSg SINE Alu 1 200 -110 1258 201 0 12 chr4 7575425 7575674 -194752673 - AluJo SINE Alu -66 246 1 437 234 188 8 chr4 7575692 7575820 -194752527 - MLT1E1 LTR MaLR -503 151 1 1285 254 197 32 chr4 7575820 7576489 -194751858 - L2 LINE L2 -586 2728 1912 1722 113 45 0 chr4 7576489 7576755 -194751592 + AluSg SINE Alu 33 310 0 1285 254 197 32 chr4 7576755 7576863 -194751484 - L2 LINE L2 -1402 1912 1823 1301 155 9 13 chr4 7576863 7577095 -194751252 + AluJo SINE Alu 1 231 -81 259 109 0 43 chr4 7577135 7577181 -194751166 + AluJo SINE Alu 229 272 -30 400 247 79 39 chr4 7577185 7577363 -194750984 - L2 LINE L2 -1481 1833 1649 1449 127 0 0 chr4 7577576 7577788 -194750559 + AluSg/x SINE Alu 98 309 -1 1453 59 53 0 chr4 7578838 7579025 -194749322 + MER107 DNA MER1_type 1 197 0 402 200 265 6 chr4 7579062 7579232 -194749115 - L2 LINE L2 -1186 2128 1915 897 250 11 0 chr4 7579775 7579959 -194748388 - MER5A DNA MER1_type -3 186 1 535 138 0 12 chr4 7580215 7580295 -194748052 - AluJ/FLAM SINE Alu -232 80 2 730 178 0 0 chr4 7580296 7580431 -194747916 - MER4C LTR ERV1 -330 135 1 207 196 0 69 chr4 7581529 7581631 -194746716 + (CACAC)n Simple_repeat Simple_repeat 1 95 0 * 494 189 19 36 chr4 7581571 7581965 -194746382 + (CA)n Simple_repeat Simple_repeat 1 387 0 266 190 16 38 chr4 7582057 7582241 -194746106 + (CA)n Simple_repeat Simple_repeat 1 180 0 2098 123 0 0 chr4 7582471 7582772 -194745575 - AluSg SINE Alu -9 301 1 1975 161 0 0 chr4 7582778 7583088 -194745259 - AluJb SINE Alu -2 310 1 180 356 8 51 chr4 7583384 7583502 -194744845 - MIR SINE MIR -42 220 108 2177 105 3 0 chr4 7587897 7588201 -194740146 + AluSx SINE Alu 1 305 -7 216 97 0 0 chr4 7588444 7588475 -194739872 + (TTCA)n Simple_repeat Simple_repeat 4 34 0 1002 190 51 0 chr4 7589082 7589277 -194739070 + MER3 DNA MER1_type 1 205 -4 228 289 195 6 chr4 7589450 7589609 -194738738 + L2 LINE L2 2910 3098 -215 256 315 108 0 chr4 7590180 7590291 -194738056 - MIR3 SINE MIR -26 182 60 399 262 210 15 chr4 7591589 7591860 -194736487 + L2 LINE L2 1005 1328 -1986 808 186 3 43 chr4 7591882 7592171 -194736176 + MLT1A1 LTR MaLR 1 347 -18 2228 94 3 19 chr4 7592171 7592489 -194735858 + AluSp SINE Alu 1 313 0 808 186 3 43 chr4 7592489 7592508 -194735839 + MLT1A1 LTR MaLR 347 365 0 4669 165 45 12 chr4 7592586 7593412 -194734935 + L1MC1 LINE L1 5481 6333 0 1425 99 0 0 chr4 7593444 7593626 -194734721 + AluSx SINE Alu 1 182 -130 736 312 67 10 chr4 7593903 7594217 -194734130 + L1ME3A LINE L1 5763 6094 -76 2115 89 3 16 chr4 7594703 7594870 -194733477 - AluSx SINE Alu -12 300 137 2184 88 3 3 chr4 7594870 7595165 -194733182 - AluY SINE Alu -16 295 1 2115 89 3 16 chr4 7595165 7595301 -194733046 - AluSx SINE Alu -175 137 1 320 277 62 4 chr4 7595579 7595695 -194732652 + MIR SINE MIR 30 148 -62 1945 120 43 10 chr4 7595760 7596059 -194732288 + AluSg SINE Alu 1 309 -1 356 324 35 28 chr4 7596143 7596288 -194732059 - L2 LINE L2 -1 3312 3167 675 249 23 34 chr4 7596363 7596540 -194731807 + MER5B DNA MER1_type 3 177 -1 2480 52 3 3 chr4 7596595 7596904 -194731443 - AluSp SINE Alu -4 309 1 346 326 0 0 chr4 7598718 7598816 -194729531 - L2 LINE L2 -208 3064 2967 234 291 89 0 chr4 7599070 7599149 -194729198 + MLT1J1 LTR MaLR 16 101 -345 248 281 117 41 chr4 7599150 7599321 -194729026 + MLT1J2 LTR MaLR 115 298 -152 2086 102 0 14 chr4 7600287 7600580 -194727767 - AluSx SINE Alu -23 289 1 269 322 63 21 chr4 7601001 7601144 -194727203 + MIR SINE MIR 80 228 -34 359 279 74 16 chr4 7601676 7601798 -194726549 - L2 LINE L2 -5 3308 3180 337 241 58 0 chr4 7601819 7601906 -194726441 + MER69 DNA AcHobo 2435 2526 0 261 225 234 0 chr4 7602012 7602123 -194726224 - Charlie8 DNA MER1_type -2245 172 36 1372 159 40 0 chr4 7603346 7603573 -194724774 + AluJb SINE Alu 42 277 -35 206 0 69 0 chr4 7603580 7603609 -194724738 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 336 48 0 0 chr4 7604045 7604087 -194724260 + (CA)n Simple_repeat Simple_repeat 1 42 0 1617 171 6 32 chr4 7604102 7604418 -194723929 - AluJo SINE Alu -4 308 1 2511 24 0 7 chr4 7604573 7604869 -194723478 - AluYa5 SINE Alu -17 294 1 1799 158 0 32 chr4 7605766 7606076 -194722271 - AluJb SINE Alu -12 300 1 2033 97 7 7 chr4 7609490 7609780 -194718567 - AluSx SINE Alu -22 290 1 574 93 0 0 chr4 7610296 7610371 -194717976 - AluJ/FRAM SINE Alu -8 304 230 623 143 0 36 chr4 7610571 7610683 -194717664 + AluSg/x SINE Alu 201 308 -2 2086 128 0 0 chr4 7610757 7611054 -194717293 - AluSx SINE Alu -15 297 1 192 308 115 8 chr4 7611914 7612044 -194716303 + L2 LINE L2 2811 2954 -318 188 295 33 82 chr4 7612286 7612408 -194715939 - MIR SINE MIR -79 183 68 277 270 37 0 chr4 7612752 7612844 -194715503 + MIR SINE MIR 69 164 -68 1142 84 0 0 chr4 7612877 7613019 -194715328 - AluSq/x SINE Alu -171 142 1 303 331 81 12 chr4 7613020 7613180 -194715167 - MIR SINE MIR -80 182 12 194 208 75 0 chr4 7613217 7613270 -194715077 - L2 LINE L2 -74 3198 3142 182 226 218 16 chr4 7613287 7613411 -194714936 + L2 LINE L2 2888 3036 -236 859 178 62 39 chr4 7613752 7613960 -194714387 + MER20 DNA MER1_type 7 219 0 258 264 91 36 chr4 7614154 7614264 -194714083 - MIR SINE MIR -140 122 7 261 220 0 0 chr4 7614325 7614375 -194713972 + L2 LINE L2 3137 3186 -86 194 243 0 81 chr4 7614765 7614839 -194713508 + MIR SINE MIR 75 142 -120 304 321 58 15 chr4 7615265 7615402 -194712945 - MIR SINE MIR -4 258 116 260 287 78 17 chr4 7615482 7615597 -194712750 - MIR SINE MIR -67 141 20 204 317 67 0 chr4 7615629 7615733 -194712614 - MER5A DNA MER1_type -42 147 37 184 42 0 0 chr4 7616280 7616304 -194712043 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 1821 114 102 0 chr4 7616304 7616559 -194711788 - AluSx SINE Alu -1 304 1 2137 122 0 3 chr4 7618356 7618651 -194709696 - AluSx SINE Alu -18 294 1 311 291 88 11 chr4 7619026 7619151 -194709196 - MIR SINE MIR -68 140 51 700 224 68 6 chr4 7619353 7619514 -194708833 + FAM SINE Alu 2 172 -3 2424 93 0 0 chr4 7619575 7619875 -194708472 + AluSg SINE Alu 1 300 -10 1248 131 0 6 chr4 7619875 7620050 -194708297 + AluSg/x SINE Alu 132 305 -5 1678 176 13 20 chr4 7620064 7620370 -194707977 + AluJb SINE Alu 3 306 -6 2338 97 0 3 chr4 7620489 7620788 -194707559 + AluSq SINE Alu 1 298 -15 956 170 12 29 chr4 7621129 7621300 -194707047 + FRAM SINE Alu 1 167 -9 1282 164 9 13 chr4 7621440 7621650 -194706697 + AluJo SINE Alu 86 296 -16 2466 85 0 0 chr4 7621650 7621956 -194706391 + AluSg SINE Alu 1 306 -4 1282 164 9 13 chr4 7621956 7621971 -194706376 + AluJo SINE Alu 296 310 -2 2250 91 7 0 chr4 7622129 7622416 -194705931 + AluSq SINE Alu 7 295 -18 370 297 24 91 chr4 7622915 7623124 -194705223 + MIR SINE MIR 57 251 -11 186 152 0 0 chr4 7624089 7624122 -194704225 + L2 LINE L2 3021 3053 -260 2311 93 0 35 chr4 7625425 7625737 -194702610 - AluSq SINE Alu -12 301 1 352 246 169 27 chr4 7625888 7626071 -194702276 - MIR SINE MIR -26 236 28 2375 99 3 0 chr4 7626509 7626812 -194701535 - AluSx SINE Alu -8 304 1 1719 137 56 14 chr4 7627419 7627587 -194700760 - AluJb SINE Alu -15 297 111 180 0 0 0 chr4 7627587 7627607 -194700740 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1719 137 56 14 chr4 7627607 7627723 -194700624 - AluJb SINE Alu -201 111 1 277 255 122 20 chr4 7627991 7628089 -194700258 - MIR SINE MIR -131 131 24 2190 131 3 6 chr4 7628275 7628589 -194699758 + AluSq SINE Alu 1 313 0 797 328 8 0 chr4 7628623 7628864 -194699483 + MIR SINE MIR 20 262 0 240 258 21 43 chr4 7629032 7629125 -194699222 + MIR3 SINE MIR 112 202 -6 29 0 0 0 chr4 7629142 7629171 -194699176 + AT_rich Low_complexity Low_complexity 1 29 0 265 109 0 0 chr4 7629171 7629217 -194699130 - AluSc SINE Alu 0 299 254 444 268 150 0 chr4 7629408 7629561 -194698786 + MER5B DNA MER1_type 3 178 0 192 294 88 0 chr4 7629630 7629732 -194698615 - MIR SINE MIR -65 143 33 242 337 47 0 chr4 7629795 7629881 -194698466 + L2 LINE L2 3143 3232 -40 2105 141 0 3 chr4 7631573 7631886 -194696461 + AluJb SINE Alu 1 312 0 280 216 72 36 chr4 7631944 7632055 -194696292 - MIR3 SINE MIR -7 201 87 2337 83 3 25 chr4 7633336 7633650 -194694697 + AluY SINE Alu 1 307 -4 1961 157 3 0 chr4 7633791 7634091 -194694256 - AluJo SINE Alu -11 301 1 211 224 0 35 chr4 7634091 7634149 -194694198 - MIR SINE MIR -101 161 106 1719 149 39 62 chr4 7634325 7634482 -194693865 - AluJb SINE Alu -10 302 154 2060 112 42 3 chr4 7634482 7634767 -194693580 - AluSx SINE Alu -16 296 1 1719 149 39 62 chr4 7634767 7634918 -194693429 - AluJb SINE Alu -158 154 1 2363 94 0 16 chr4 7635480 7635788 -194692559 - AluSq SINE Alu -10 303 1 2224 125 0 0 chr4 7635791 7636088 -194692259 - AluSx SINE Alu -15 297 1 1074 150 0 0 chr4 7636418 7636578 -194691769 + AluSg/x SINE Alu 144 303 -6 2523 69 3 0 chr4 7636704 7637008 -194691339 + AluY SINE Alu 1 305 -6 2636 85 16 6 chr4 7637028 7637394 -194690953 + THE1C LTR MaLR 1 370 -5 1876 187 3 42 chr4 7637511 7637891 -194690456 - MLT1A1 LTR MaLR 0 365 1 180 313 0 0 chr4 7637956 7638004 -194690343 - L2 LINE L2 -596 2718 2671 2349 94 0 7 chr4 7638226 7638524 -194689823 - AluSq SINE Alu -17 296 1 2074 133 26 0 chr4 7638540 7638842 -194689505 - AluSx SINE Alu -2 310 1 1472 142 104 4 chr4 7639539 7639779 -194688568 - AluJo SINE Alu -12 300 37 377 265 99 88 chr4 7639806 7640089 -194688258 - L1MC5 LINE L1 -37 7924 7639 1929 138 7 10 chr4 7640605 7640901 -194687446 - AluJb SINE Alu -4 308 14 278 240 91 50 chr4 7641257 7641378 -194686969 - MIR SINE MIR -117 145 20 214 318 15 0 chr4 7642023 7642089 -194686258 + L2 LINE L2 3242 3308 -5 2025 153 59 50 chr4 7642248 7642479 -194685868 + MSTA LTR MaLR 1 239 -189 2406 96 0 0 chr4 7642479 7642771 -194685576 + AluSp SINE Alu 1 292 -21 2025 153 59 50 chr4 7642771 7642963 -194685384 + MSTA LTR MaLR 239 428 0 2278 93 101 25 chr4 7643271 7643669 -194684678 - MSTA LTR MaLR 0 428 1 2531 140 56 22 chr4 7646024 7646159 -194682188 + MER4C LTR ERV1 1 130 -335 1590 138 109 4 chr4 7646159 7646434 -194681913 + AluJb SINE Alu 1 304 -8 2531 140 56 22 chr4 7646434 7646748 -194681599 + MER4C LTR ERV1 130 465 0 340 282 40 16 chr4 7646756 7646880 -194681467 - MIR SINE MIR -56 206 80 2288 87 7 3 chr4 7646929 7647218 -194681129 - AluSx SINE Alu -20 292 3 560 240 157 23 chr4 7647268 7647485 -194680862 + MIR SINE MIR 17 262 0 362 199 202 17 chr4 7647869 7648004 -194680343 + AluSq SINE Alu 107 255 -48 1480 168 75 4 chr4 7648067 7648335 -194680012 + AluJo SINE Alu 2 288 -24 6965 131 38 26 chr4 7648337 7648546 -194679801 + HSMAR2 DNA Mariner 45 250 -1052 2383 96 0 10 chr4 7648546 7648848 -194679499 - AluSc SINE Alu -10 299 1 6965 131 38 26 chr4 7648848 7649881 -194678466 + HSMAR2 DNA Mariner 250 1301 -1 231 204 0 0 chr4 7651310 7651364 -194676983 + (CA)n Simple_repeat Simple_repeat 2 55 0 253 236 97 0 chr4 7653449 7653521 -194674826 - L2 LINE L2 -1 3312 3234 593 302 14 51 chr4 7654557 7654772 -194673575 + MIR SINE MIR 1 207 -55 291 347 75 17 chr4 7654770 7655064 -194673283 - L2 LINE L2 -618 2696 2386 * 237 0 0 0 chr4 7655182 7655210 -194673137 + MLT2A1 LTR ERVL 4 31 -413 2400 65 32 9 chr4 7655212 7655550 -194672797 + HERVL LTR ERVL 5113 5458 -196 420 67 0 0 chr4 7655550 7655610 -194672737 + (TATG)n Simple_repeat Simple_repeat 1 60 0 1938 104 0 0 chr4 7655610 7655850 -194672497 - AluSx SINE Alu -33 279 40 27 29 0 0 chr4 7658685 7658719 -194669628 + AT_rich Low_complexity Low_complexity 1 34 0 2563 72 0 0 chr4 7658719 7659025 -194669322 + AluY SINE Alu 1 306 -5 278 238 188 0 chr4 7659286 7659387 -194668960 + MIR SINE MIR 34 153 -55 212 281 22 45 chr4 7659487 7659517 -194668830 - MIR SINE MIR -70 192 163 2002 144 0 26 chr4 7659517 7659829 -194668518 - AluJo SINE Alu -8 304 1 212 281 22 45 chr4 7659829 7659887 -194668460 - MIR SINE MIR -99 163 106 244 281 34 22 chr4 7659945 7660034 -194668313 + L1ME4a LINE L1 5963 6052 -69 1202 144 0 11 chr4 7660047 7660234 -194668113 - AluSg/x SINE Alu -6 306 122 46 62 0 0 chr4 7660555 7660636 -194667711 + AT_rich Low_complexity Low_complexity 1 81 0 477 72 86 0 chr4 7660636 7660775 -194667572 + (TA)n Simple_repeat Simple_repeat 1 151 0 481 128 26 0 chr4 7660791 7660869 -194667478 + AluSc SINE Alu 214 293 -16 909 194 23 60 chr4 7660869 7661085 -194667262 - LTR8A LTR ERV1 -243 484 277 1152 140 0 0 chr4 7661199 7661377 -194666970 + MER41C LTR ERV1 377 554 0 189 273 18 0 chr4 7664684 7664739 -194663608 - MIR SINE MIR -48 214 159 2119 128 40 0 chr4 7664760 7665056 -194663291 + AluSx SINE Alu 1 308 -4 1082 214 72 7 chr4 7665307 7665611 -194662736 + MER33 DNA MER1_type 1 324 0 921 208 43 14 chr4 7666128 7666335 -194662012 - MIR SINE MIR -43 219 7 352 276 111 50 chr4 7666338 7666519 -194661828 - MIR SINE MIR -51 211 20 3432 135 19 19 chr4 7668690 7669259 -194659088 + L1MB4 LINE L1 5588 6156 -24 1908 133 77 17 chr4 7669272 7669624 -194658723 + THE1C LTR MaLR 1 373 -2 2095 128 0 6 chr4 7670153 7670465 -194657882 - AluSq SINE Alu -3 310 1 2312 65 0 20 chr4 7670972 7671287 -194657060 + AluY SINE Alu 1 311 0 1290 134 0 0 chr4 7671287 7671466 -194656881 + AluSg/x SINE Alu 134 312 0 1507 159 25 70 chr4 7671507 7671821 -194656526 + AluJo SINE Alu 1 300 -12 345 24 0 0 chr4 7671822 7671864 -194656483 + (GGAA)n Simple_repeat Simple_repeat 2 43 0 314 227 21 31 chr4 7671875 7671972 -194656375 + L1ME4a LINE L1 5966 6061 -60 466 37 0 111 chr4 7672895 7672976 -194655371 + L1PA2 LINE L1 6084 6155 0 492 283 28 28 chr4 7673656 7673907 -194654440 + L1MCa LINE L1 1404 1654 -4772 * 836 88 1 33 chr4 7673888 7674026 -194654321 + L1PB1 LINE L1 5659 5791 -360 417 241 0 0 chr4 7674027 7674139 -194654208 + (TA)n Simple_repeat Simple_repeat 2 113 0 2515 106 11 16 chr4 7674139 7674516 -194653831 + L1PB1 LINE L1 5776 6150 -1 304 222 21 0 chr4 7674537 7674613 -194653734 + L1M1 LINE L1 2887 3288 -4278 1240 180 171 59 chr4 7674613 7674969 -194653378 + MSTD LTR MaLR 1 396 0 559 199 85 50 chr4 7675025 7675226 -194653121 + L1MCa LINE L1 2039 2246 -4361 307 248 8 26 chr4 7675235 7675352 -194652995 + L1M1 LINE L1 3557 3671 -3894 5843 170 21 24 chr4 7675473 7677287 -194651060 - L1PA16 LINE L1 -1 6165 4367 2266 113 0 0 chr4 7677323 7677624 -194650723 - AluSg1 SINE Alu -8 301 1 2772 229 132 21 chr4 7677679 7678230 -194650117 + L1M1 LINE L1 3661 4149 -3416 1762 98 8 16 chr4 7678230 7678474 -194649873 + AluY SINE Alu 1 242 -69 2772 229 132 21 chr4 7678474 7679163 -194649184 + L1M1 LINE L1 4149 5110 -2455 2521 56 3 3 chr4 7679163 7679465 -194648882 + AluY SINE Alu 1 302 -9 2772 229 132 21 chr4 7679465 7679559 -194648788 + L1M1 LINE L1 5110 5192 -2373 182 314 64 71 chr4 7680944 7681084 -194647263 + MIR3 SINE MIR 3 141 -67 1158 79 0 0 chr4 7681616 7681768 -194646579 + AluY SINE Alu 160 311 0 2223 109 0 7 chr4 7681908 7682210 -194646137 - AluSx SINE Alu -12 300 1 26 64 0 0 chr4 7682625 7682672 -194645675 + AT_rich Low_complexity Low_complexity 1 47 0 2245 116 0 10 chr4 7682807 7683110 -194645237 + AluSx SINE Alu 1 300 -12 1201 188 127 68 chr4 7683719 7684116 -194644231 - L1M4 LINE L1 -1479 4667 4141 2149 194 124 10 chr4 7684117 7684626 -194643721 - Cheshire DNA MER1_type -299 2121 1555 505 122 0 0 chr4 7684880 7684954 -194643393 + AluS SINE Alu 3 76 -234 285 271 156 65 chr4 7685342 7685682 -194642665 + MLT1K LTR MaLR 184 554 -34 2031 135 10 0 chr4 7686552 7686849 -194641498 - AluSx SINE Alu -12 300 1 198 0 0 0 chr4 7686946 7686968 -194641379 + (A)n Simple_repeat Simple_repeat 1 22 0 1978 149 0 0 chr4 7687217 7687506 -194640841 + AluJb SINE Alu 11 299 -13 288 191 135 11 chr4 7687508 7687597 -194640750 - HAL1 LINE L1 -871 1636 1537 226 260 153 33 chr4 7687769 7687919 -194640428 + MIR3 SINE MIR 20 187 -21 211 239 0 0 chr4 7688056 7688102 -194640245 - L2 LINE L2 -14 3299 3254 181 352 69 21 chr4 7688496 7688641 -194639706 - L2 LINE L2 -222 3050 2899 521 262 52 34 chr4 7689616 7689819 -194638528 - L2 LINE L2 0 3313 3104 1292 179 24 94 chr4 7689819 7690149 -194638198 + AluJo SINE Alu 5 311 -1 521 262 52 34 chr4 7690149 7690178 -194638169 - L2 LINE L2 -209 3104 3077 249 206 43 121 chr4 7690680 7690780 -194637567 - MIR SINE MIR -89 119 29 542 200 156 19 chr4 7691213 7691368 -194636979 - MIR SINE MIR -13 249 73 252 298 81 25 chr4 7691948 7692109 -194636238 + MIR SINE MIR 57 226 -36 198 0 0 0 chr4 7692220 7692242 -194636105 + (CA)n Simple_repeat Simple_repeat 1 22 0 392 272 19 0 chr4 7692246 7692349 -194635998 - MIR3 SINE MIR -22 186 82 647 305 59 25 chr4 7692959 7693313 -194635034 - L2 LINE L2 -28 3285 2920 243 0 0 0 chr4 7693571 7693598 -194634749 + (TG)n Simple_repeat Simple_repeat 2 28 0 229 286 76 17 chr4 7694160 7694279 -194634068 + MIR SINE MIR 63 188 -74 198 191 149 0 chr4 7694468 7694515 -194633832 + L2 LINE L2 3258 3311 -2 5072 64 0 5 chr4 7694860 7695500 -194632847 + L1PA6 LINE L1 5518 6154 0 1544 235 131 22 chr4 7695604 7696055 -194632292 + MLT1H1 LTR MaLR 43 542 -13 22 0 0 0 chr4 7696210 7696232 -194632115 + AT_rich Low_complexity Low_complexity 1 22 0 800 142 40 0 chr4 7696735 7696883 -194631464 + FRAM SINE Alu 22 175 -1 284 274 65 40 chr4 7696884 7697008 -194631339 - MIR SINE MIR -134 128 2 1797 128 0 4 chr4 7697309 7697559 -194630788 - AluJb SINE Alu -4 308 60 565 261 68 54 chr4 7698215 7698317 -194630030 - L2 LINE L2 -4 3309 3210 2334 97 0 0 chr4 7698317 7698615 -194629732 + AluSx SINE Alu 1 298 -14 565 261 68 54 chr4 7698615 7698792 -194629555 - L2 LINE L2 -103 3210 3026 524 197 146 0 chr4 7699263 7699400 -194628947 + L1ME3A LINE L1 6009 6165 -5 2470 77 0 13 chr4 7699612 7699924 -194628423 + AluSg SINE Alu 1 308 -2 238 229 16 33 chr4 7700015 7700076 -194628271 + MLT1K LTR MaLR 59 118 -470 2151 122 10 3 chr4 7700259 7700562 -194627785 + AluSx SINE Alu 1 305 -7 421 278 96 32 chr4 7700680 7700867 -194627480 + MIR SINE MIR 64 262 0 1492 276 128 25 chr4 7701486 7702193 -194626154 + L1MC4 LINE L1 7038 7951 -91 1234 175 44 0 chr4 7702193 7702467 -194625880 + L1MA4 LINE L1 6012 6297 -3 1492 276 128 25 chr4 7702467 7702570 -194625777 + L1MC4 LINE L1 7951 8042 0 1155 168 34 10 chr4 7702576 7702784 -194625563 - AluJb SINE Alu -16 296 84 1257 159 48 0 chr4 7704255 7704463 -194623884 + AluJo SINE Alu 85 302 -10 1010 114 0 0 chr4 7704873 7705005 -194623342 + FRAM SINE Alu 22 153 -23 246 105 0 0 chr4 7705355 7705393 -194622954 + (TC)n Simple_repeat Simple_repeat 1 38 0 1810 143 11 25 chr4 7705411 7705697 -194622650 - AluJb SINE Alu -30 282 1 24 0 0 0 chr4 7706812 7706836 -194621511 + AT_rich Low_complexity Low_complexity 1 24 0 716 237 6 34 chr4 7706954 7707131 -194621216 + FAM SINE Alu 2 173 -2 5723 17 0 2 chr4 7707528 7708165 -194620182 + L1PA3 LINE L1 5497 6132 -23 21 0 0 0 chr4 7709050 7709071 -194619276 + GC_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr4 7709081 7709109 -194619238 + GC_rich Low_complexity Low_complexity 1 28 0 851 161 99 6 chr4 7710723 7710885 -194617462 - FRAM SINE Alu 0 176 1 2294 95 14 0 chr4 7712012 7712307 -194616040 + AluSx SINE Alu 1 299 -13 307 250 33 42 chr4 7713997 7714117 -194614230 - MIR SINE MIR -116 146 28 320 275 130 0 chr4 7714216 7714347 -194614000 + MIR SINE MIR 63 210 -52 2187 115 0 0 chr4 7715573 7715861 -194612486 + AluSx SINE Alu 1 288 -24 2088 98 6 53 chr4 7716412 7716730 -194611617 + AluSq SINE Alu 1 303 -10 2252 112 0 7 chr4 7717352 7717657 -194610690 - AluSc SINE Alu -6 303 1 2427 49 3 3 chr4 7717686 7717970 -194610377 - AluY SINE Alu -16 295 12 1629 60 0 0 chr4 7718406 7718623 -194609724 + GSAT Satellite centromeric 1 217 0 754 123 13 175 chr4 7718858 7719086 -194609261 + 7SK RNA RNA 1 191 -2 2370 90 3 0 chr4 7719190 7719489 -194608858 + AluSx SINE Alu 1 300 -12 1779 159 68 3 chr4 7719497 7719850 -194608497 + L1MB3 LINE L1 5775 6150 -33 2188 108 31 0 chr4 7719934 7720221 -194608126 + AluSg SINE Alu 1 296 -14 429 273 46 41 chr4 7720234 7720377 -194607970 + L1ME3A LINE L1 5959 6105 -65 2338 111 0 0 chr4 7720377 7720684 -194607663 - AluSx SINE Alu -5 307 1 429 273 46 41 chr4 7720684 7720734 -194607613 + L1ME3A LINE L1 6105 6153 -17 236 292 202 6 chr4 7721165 7721333 -194607014 + L2 LINE L2 2558 2758 -556 192 355 11 32 chr4 7721484 7721577 -194606770 + L2 LINE L2 2928 3018 -254 360 278 102 24 chr4 7722161 7722366 -194605981 - MIR SINE MIR -34 228 8 202 275 110 28 chr4 7722846 7722955 -194605392 + L2 LINE L2 3150 3267 -5 197 318 136 45 chr4 7724659 7724857 -194603490 - MIR SINE MIR -26 236 21 1850 148 3 30 chr4 7725565 7725869 -194602478 + AluSx SINE Alu 4 299 -13 180 316 51 26 chr4 7726286 7726403 -194601944 - L2 LINE L2 -15 3257 3138 2324 108 0 13 chr4 7726962 7727098 -194601249 + AluSx SINE Alu 1 137 -175 2260 108 0 3 chr4 7727098 7727394 -194600953 + AluSg SINE Alu 1 295 -15 2324 108 0 13 chr4 7727394 7727564 -194600783 + AluSx SINE Alu 137 303 -9 691 191 37 0 chr4 7727903 7728039 -194600308 + FLAM_C SINE Alu 2 142 -1 253 257 147 9 chr4 7729818 7729934 -194598413 + MIR SINE MIR 45 177 -69 2402 83 7 0 chr4 7730254 7730555 -194597792 - AluSq SINE Alu -10 303 1 351 270 81 9 chr4 7733233 7733344 -194595003 - MIR SINE MIR -72 136 18 262 0 53 0 chr4 7733380 7733418 -194594929 + (TTTTG)n Simple_repeat Simple_repeat 2 41 0 1993 133 0 4 chr4 7733423 7733702 -194594645 - AluSx SINE Alu -34 278 1 1601 153 8 4 chr4 7736303 7736544 -194591803 - AluJb SINE Alu -45 267 26 3321 39 11 27 chr4 7736644 7737085 -194591262 + MLT2A1 LTR ERVL 11 444 0 194 299 0 30 chr4 7737170 7737237 -194591110 - L2 LINE L2 -76 3196 3132 388 236 149 43 chr4 7738490 7738651 -194589696 - MER5B DNA MER1_type 0 178 1 496 335 62 0 chr4 7739107 7739301 -194589046 + MIR SINE MIR 27 232 -30 233 273 240 19 chr4 7739719 7739873 -194588474 - MIR SINE MIR -27 235 48 257 290 20 10 chr4 7740040 7740140 -194588207 + L2 LINE L2 2787 2887 -427 207 262 98 0 chr4 7740274 7740335 -194588012 + L2 LINE L2 3209 3275 -38 199 258 86 43 chr4 7740415 7740508 -194587839 + MIR SINE MIR 85 181 -81 291 261 118 25 chr4 7741254 7741373 -194586974 + MIR3 SINE MIR 47 176 -32 318 349 38 0 chr4 7742625 7742757 -194585590 + L2 LINE L2 3127 3263 -9 2037 158 0 3 chr4 7743062 7743372 -194584975 - AluJb SINE Alu -3 309 1 2285 114 3 0 chr4 7743705 7744002 -194584345 - AluSx SINE Alu -14 298 1 275 293 132 9 chr4 7745421 7745527 -194582820 + L2 LINE L2 3153 3271 -1 489 326 95 31 chr4 7745929 7746254 -194582093 + L2 LINE L2 2967 3312 -1 195 269 141 0 chr4 7746665 7746743 -194581604 + MIR SINE MIR 84 172 -90 261 253 0 25 chr4 7747338 7747417 -194580930 + L1ME LINE L1 5743 5819 -302 248 336 118 8 chr4 7747658 7747777 -194580570 + L2 LINE L2 3133 3264 -8 2467 90 0 3 chr4 7748922 7749232 -194579115 + AluSx SINE Alu 1 309 -3 2433 99 3 0 chr4 7749763 7750066 -194578281 - AluSx SINE Alu -8 304 1 405 185 32 140 chr4 7750611 7750629 -194577718 + L1MB3 LINE L1 5459 5477 -706 261 0 0 0 chr4 7750629 7750658 -194577689 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 405 185 32 140 chr4 7750658 7750796 -194577551 + L1MB3 LINE L1 5477 5598 -585 873 118 67 0 chr4 7750808 7750927 -194577420 + AluJo SINE Alu 9 135 -177 2867 134 8 102 chr4 7750929 7751176 -194577171 + L1MB3 LINE L1 5594 5863 -320 1830 132 40 0 chr4 7751176 7751449 -194576898 + AluJb SINE Alu 12 295 -17 2867 134 8 102 chr4 7751449 7751739 -194576608 + L1MB3 LINE L1 5863 6179 -4 2460 97 0 0 chr4 7751739 7752050 -194576297 - AluY SINE Alu 0 311 1 2382 101 0 0 chr4 7752052 7752348 -194575999 - AluSx SINE Alu -16 296 1 2867 134 8 102 chr4 7752348 7752364 -194575983 + L1MB3 LINE L1 6180 6085 -98 1573 187 61 0 chr4 7752364 7752642 -194575705 - AluJo SINE Alu -17 295 1 2867 134 8 102 chr4 7752642 7752733 -194575614 + L1MB3 LINE L1 6084 6182 -1 408 287 89 0 chr4 7753008 7753153 -194575194 - MIR SINE MIR -62 146 34 491 276 24 35 chr4 7753200 7753370 -194574977 + L3 LINE CR1 1408 1575 -2 235 194 328 0 chr4 7753369 7753436 -194574911 - MIR SINE MIR -82 126 38 * 790 271 34 78 chr4 7754117 7754530 -194573817 + L2 LINE L2 2919 3313 0 317 237 10 10 chr4 7754835 7754932 -194573415 - MIR SINE MIR -127 135 39 403 250 46 9 chr4 7755091 7755199 -194573148 + MIR3 SINE MIR 83 194 -14 2242 128 7 0 chr4 7755790 7756096 -194572251 + AluSx SINE Alu 5 312 0 313 221 0 12 chr4 7756162 7756248 -194572099 + MIR SINE MIR 39 123 -139 188 228 123 0 chr4 7756616 7756673 -194571674 - MIR SINE MIR -147 115 52 263 317 0 10 chr4 7757056 7757160 -194571187 - L3 LINE CR1 -56 1521 1419 278 291 43 8 chr4 7757741 7757858 -194570489 - L1ME4a LINE L1 -3 6118 5998 2253 132 0 0 chr4 7757912 7758223 -194570124 - AluSx SINE Alu -1 311 1 264 286 36 0 chr4 7758337 7758421 -194569926 - L2 LINE L2 -65 3248 3162 246 240 0 0 chr4 7758423 7758473 -194569874 - L1ME4a LINE L1 -2062 5746 5697 395 347 62 12 chr4 7758726 7758968 -194569379 - L3 LINE CR1 -106 1471 1218 183 340 85 0 chr4 7759413 7759507 -194568840 - L2 LINE L2 -47 3266 3165 199 307 35 18 chr4 7759688 7759802 -194568545 - L2 LINE L2 -324 2989 2874 388 293 27 20 chr4 7760106 7760253 -194568094 - L2 LINE L2 0 3272 3125 471 308 73 89 chr4 7760338 7760887 -194567460 - L1M4 LINE L1 -2738 3408 2754 214 235 12 74 chr4 7761380 7761461 -194566886 - MIR SINE MIR -15 247 172 257 227 0 45 chr4 7761696 7761762 -194566585 + MIR SINE MIR 83 145 -63 182 335 152 11 chr4 7762264 7762455 -194565892 - L2 LINE L2 -28 3244 3027 1765 201 105 20 chr4 7763548 7763877 -194564470 - L1MB5 LINE L1 0 6174 5797 1653 138 76 11 chr4 7763877 7764152 -194564195 - AluJb SINE Alu -19 293 1 1765 201 105 20 chr4 7764152 7764261 -194564086 - L1MB5 LINE L1 -377 5797 5699 532 208 88 0 chr4 7764262 7764387 -194563960 + MIR SINE MIR 102 237 -25 251 285 184 44 chr4 7764519 7764677 -194563670 - MIR SINE MIR -75 187 8 316 199 8 145 chr4 7764738 7764869 -194563478 + L1ME4a LINE L1 6008 6120 -1 323 260 17 81 chr4 7764967 7765140 -194563207 + L1ME4a LINE L1 5959 6120 -1 213 150 33 33 chr4 7765430 7765490 -194562857 + (CCCTG)n Simple_repeat Simple_repeat 1 60 0 251 323 71 0 chr4 7765643 7765742 -194562605 + L2 LINE L2 3205 3310 -3 * 378 307 0 0 chr4 7765738 7765839 -194562508 - MIR SINE MIR -99 163 63 392 239 0 0 chr4 7765955 7766047 -194562300 + MIR SINE MIR 28 119 -143 259 255 78 10 chr4 7767079 7767181 -194561166 + MIR SINE MIR 114 222 -40 2527 65 0 0 chr4 7767266 7767560 -194560787 + AluY SINE Alu 1 294 -17 195 265 235 0 chr4 7767594 7767692 -194560655 + MIR SINE MIR 20 140 -68 226 310 0 14 chr4 7768519 7768593 -194559754 + MIR SINE MIR 71 144 -64 235 349 0 8 chr4 7769024 7769150 -194559197 + GA-rich Low_complexity Low_complexity 1 125 0 326 270 135 0 chr4 7770172 7770283 -194558064 + LTR16C LTR ERVL 84 209 -282 208 123 15 46 chr4 7770473 7770538 -194557809 + T-rich Low_complexity Low_complexity 3 65 0 2445 46 0 20 chr4 7770552 7770858 -194557489 + AluY SINE Alu 1 300 -11 1738 146 0 7 chr4 7770860 7771134 -194557213 - AluSx SINE Alu -40 272 1 1988 184 38 25 chr4 7771143 7771359 -194556988 - L1MB7 LINE L1 0 6184 5972 2429 58 0 13 chr4 7771359 7771670 -194556677 - AluY SINE Alu -4 307 1 1988 184 38 25 chr4 7771670 7771802 -194556545 - L1MB7 LINE L1 -212 5972 5826 2058 120 10 0 chr4 7771802 7772111 -194556236 - AluSx SINE Alu 0 312 1 1988 184 38 25 chr4 7772111 7772206 -194556141 - L1MB7 LINE L1 -358 5826 5734 763 197 8 0 chr4 7772353 7772485 -194555862 + FLAM_A SINE Alu 1 133 0 1606 176 12 56 chr4 7772511 7772835 -194555512 + AluJb SINE Alu 3 312 0 545 172 15 15 chr4 7772838 7772972 -194555375 + GA-rich Low_complexity Low_complexity 2 135 0 2852 84 7 5 chr4 7773080 7773506 -194554841 + L1P5 LINE L1 5365 5791 -360 326 371 0 0 chr4 7773528 7773617 -194554730 + L1MC4 LINE L1 6615 6703 -1339 2517 80 14 11 chr4 7773620 7773981 -194554366 + L1PB1 LINE L1 5782 6143 -8 34 42 0 0 chr4 7774012 7774060 -194554287 + AT_rich Low_complexity Low_complexity 1 48 0 1875 113 0 0 chr4 7774727 7774984 -194553363 - AluSq SINE Alu -56 257 1 1722 149 13 17 chr4 7774988 7775289 -194553058 - AluJb SINE Alu -12 300 1 1326 220 48 43 chr4 7775939 7776458 -194551889 + MER51C LTR ERV1 3 564 -76 1815 108 0 0 chr4 7776800 7777049 -194551298 - AluSg SINE Alu -61 249 1 741 205 13 0 chr4 7777050 7777201 -194551146 + L1MB5 LINE L1 6021 6173 -1 1391 136 45 0 chr4 7777201 7777439 -194550908 + L1MB3 LINE L1 5926 6178 -5 397 115 0 0 chr4 7777527 7777588 -194550759 + L1MC2 LINE L1 6271 6331 -13 192 118 0 0 chr4 7777684 7777693 -194550654 + (TTAGGG)n Simple_repeat Simple_repeat 2 10 -25 7543 43 0 2 chr4 7777693 7779188 -194549159 + L1PA5 LINE L1 4662 6154 0 192 118 0 0 chr4 7779188 7779212 -194549135 + (TTAGGG)n Simple_repeat Simple_repeat 9 35 0 1694 175 83 6 chr4 7779305 7779653 -194548694 - MLT1E2 LTR MaLR -6 620 246 21 0 0 0 chr4 7779660 7779681 -194548666 + GC_rich Low_complexity Low_complexity 1 21 0 766 184 20 169 chr4 7779711 7780054 -194548293 - MLT1E2 LTR MaLR -334 292 1 2164 100 0 3 chr4 7780451 7780752 -194547595 - AluSx SINE Alu -12 300 1 1633 86 16 19 chr4 7781447 7781703 -194546644 - MER51C LTR ERV1 -1 639 385 447 216 8 36 chr4 7782604 7782979 -194545368 + (CA)n Simple_repeat Simple_repeat 1 364 0 233 254 0 0 chr4 7783000 7783067 -194545280 + (CA)n Simple_repeat Simple_repeat 2 68 0 385 239 16 6 chr4 7783095 7783416 -194544931 + (CA)n Simple_repeat Simple_repeat 1 324 0 198 302 47 0 chr4 7783590 7783676 -194544671 + L2 LINE L2 3182 3271 -1 201 260 30 50 chr4 7783772 7783872 -194544475 + G-rich Low_complexity Low_complexity 2 99 0 217 261 31 0 chr4 7784286 7784351 -194543996 + MIR SINE MIR 113 179 -83 251 119 0 0 chr4 7784604 7784646 -194543701 + L2 LINE L2 3012 3053 -219 228 275 103 101 chr4 7785045 7785646 -194542701 + L1MC/D LINE L1 5260 5864 -1944 2250 97 0 0 chr4 7785646 7785945 -194542402 + AluSx SINE Alu 1 299 -13 228 275 103 101 chr4 7785945 7785975 -194542372 + L1MC/D LINE L1 5864 5892 -1916 1907 145 86 17 chr4 7786203 7786270 -194542077 + L1MB3 LINE L1 5798 5859 -324 2376 82 0 0 chr4 7786270 7786575 -194541772 - AluY SINE Alu -6 305 1 1907 145 86 17 chr4 7786575 7786866 -194541481 + L1MB3 LINE L1 5859 6181 -2 242 311 17 3 chr4 7786877 7787002 -194541345 - MIR SINE MIR -50 212 48 221 232 195 0 chr4 7787559 7787641 -194540706 + L2 LINE L2 3199 3296 -17 2145 186 23 49 chr4 7787707 7788180 -194540167 + MLT1C LTR MaLR 7 467 0 225 328 64 8 chr4 7788502 7788627 -194539720 - MIR SINE MIR -80 182 51 3941 157 18 17 chr4 7788778 7789435 -194538912 - L1MB7 LINE L1 -7 6177 5520 868 303 50 54 chr4 7789602 7790025 -194538322 - MLT1J LTR MaLR -78 433 13 234 0 0 0 chr4 7790103 7790129 -194538218 + (TTAA)n Simple_repeat Simple_repeat 4 29 0 1890 127 58 0 chr4 7790264 7790555 -194537792 - AluSx SINE Alu -4 308 1 188 300 57 43 chr4 7790662 7790732 -194537615 - L2 LINE L2 -1 3312 3242 222 226 19 0 chr4 7790869 7790922 -194537425 - MIR SINE MIR -76 132 79 271 248 88 29 chr4 7791098 7791138 -194537209 + L1MC/D LINE L1 3313 3349 -2797 2023 104 6 31 chr4 7791138 7791456 -194536891 + AluSx SINE Alu 1 310 -2 271 248 88 29 chr4 7791456 7791552 -194536795 + L1MC/D LINE L1 3349 3457 -2689 524 313 60 19 chr4 7791831 7792099 -194536248 + LTR16A LTR ERVL 165 443 -7 1078 93 0 0 chr4 7792166 7792305 -194536042 + AluSg SINE Alu 1 139 -171 242 276 41 20 chr4 7792863 7792961 -194535386 + MLT1J LTR MaLR 322 421 -90 1864 143 20 0 chr4 7793068 7793362 -194534985 - AluJo SINE Alu -12 300 1 21 0 0 0 chr4 7793676 7793697 -194534650 + AT_rich Low_complexity Low_complexity 1 21 0 276 275 46 37 chr4 7794281 7794390 -194533957 + MIR SINE MIR 33 142 -66 267 367 7 43 chr4 7794421 7794560 -194533787 + MIR SINE MIR 55 188 -74 519 279 7 15 chr4 7795136 7795272 -194533075 - MIR SINE MIR -62 200 66 221 309 0 0 chr4 7795621 7795676 -194532671 + GA-rich Low_complexity Low_complexity 3 57 0 389 308 89 16 chr4 7795839 7796086 -194532261 - L1MC4 LINE L1 -71 7971 7707 547 270 20 0 chr4 7796437 7796589 -194531758 + L1MC/D LINE L1 4890 5044 -1102 400 174 0 83 chr4 7796592 7796661 -194531686 + L1MC/D LINE L1 5372 5431 -928 2115 109 0 0 chr4 7796661 7796975 -194531372 + AluSx SINE Alu 1 314 0 400 174 0 83 chr4 7796975 7797013 -194531334 + L1MC/D LINE L1 5431 5471 -888 260 307 40 10 chr4 7797129 7797230 -194531117 + L1MC/D LINE L1 5475 5578 -766 426 321 114 25 chr4 7797241 7797615 -194530732 - LTR16A LTR ERVL -28 436 13 226 341 47 0 chr4 7797717 7797802 -194530545 + L2 LINE L2 3180 3268 -4 438 259 40 26 chr4 7797837 7798088 -194530259 + L2 LINE L2 2580 2944 -328 356 212 189 15 chr4 7798102 7798234 -194530113 - L2 LINE L2 -241 3072 2918 199 277 158 71 chr4 7798361 7798545 -194529802 + MIR SINE MIR 63 262 0 298 327 9 9 chr4 7798818 7798925 -194529422 + MIR SINE MIR 46 152 -56 232 293 51 32 chr4 7799085 7799242 -194529105 + L2 LINE L2 2818 2977 -336 1507 176 7 46 chr4 7799364 7799671 -194528676 - AluJo SINE Alu -17 295 1 474 344 54 0 chr4 7799759 7799983 -194528364 + MIR SINE MIR 8 243 -19 212 260 110 0 chr4 7800003 7800076 -194528271 + L2 LINE L2 3232 3312 -1 1761 271 34 6 chr4 7800188 7800694 -194527653 + MLT1H1 LTR MaLR 33 552 -3 2574 120 10 135 chr4 7800934 7801511 -194526836 - MLT1D LTR MaLR 0 505 1 183 348 174 0 chr4 7801511 7801626 -194526721 - MIR SINE MIR -81 181 47 411 283 121 53 chr4 7801784 7802106 -194526241 - LTR33 LTR ERVL -177 344 1 411 340 80 4 chr4 7802543 7802781 -194525566 - ERVL LTR ERVL -681 5083 4828 2053 205 34 18 chr4 7802786 7803227 -194525120 + MLT1C LTR MaLR 1 448 -19 400 187 27 0 chr4 7803227 7803302 -194525045 - MLT1A1 LTR MaLR -1 364 288 2240 119 0 0 chr4 7803303 7803732 -194524615 + AluSx SINE Alu 1 429 0 1041 176 129 24 chr4 7803732 7804006 -194524341 - MLT1A1 LTR MaLR -55 341 6 341 232 24 0 chr4 7804047 7804129 -194524218 - MER94 DNA DNA -50 84 1 1171 323 62 13 chr4 7804524 7804839 -194523508 - ERVL LTR ERVL -1346 4308 3955 1918 202 146 17 chr4 7804839 7805299 -194523048 + MLT2B1 LTR ERVL 2 520 0 1171 323 62 13 chr4 7805299 7805519 -194522828 - ERVL LTR ERVL -1699 3955 3747 425 307 84 18 chr4 7805560 7805785 -194522562 - LTR33 LTR ERVL -272 249 10 192 77 0 0 chr4 7806106 7806132 -194522215 + (GAAA)n Simple_repeat Simple_repeat 3 28 0 302 271 138 9 chr4 7806192 7806402 -194521945 - L2 LINE L2 -245 3068 2832 330 267 145 35 chr4 7807896 7808105 -194520242 + MIR SINE MIR 38 256 -6 329 0 0 24 chr4 7808115 7808157 -194520190 + (CA)n Simple_repeat Simple_repeat 2 42 0 1766 179 82 9 chr4 7808295 7808635 -194519712 + MLT1A1 LTR MaLR 1 365 0 505 297 88 0 chr4 7809174 7809356 -194518991 + MIR SINE MIR 65 262 0 1930 243 118 21 chr4 7809400 7810184 -194518163 + MER45C DNA AcHobo 6 953 0 255 250 0 0 chr4 7810344 7810460 -194517887 + (CA)n Simple_repeat Simple_repeat 2 117 0 496 129 24 0 chr4 7811087 7811172 -194517175 + MIR SINE MIR 64 150 -112 460 276 35 52 chr4 7811386 7811560 -194516787 - MIR SINE MIR -70 192 22 225 221 13 39 chr4 7812189 7812266 -194516081 + (CGGGG)n Simple_repeat Simple_repeat 4 78 0 205 243 19 39 chr4 7812342 7812445 -194515902 + G-rich Low_complexity Low_complexity 4 104 0 28 29 0 0 chr4 7812513 7812548 -194515799 + GC_rich Low_complexity Low_complexity 1 35 0 23 33 0 0 chr4 7812580 7812610 -194515737 + GC_rich Low_complexity Low_complexity 1 30 0 306 188 0 79 chr4 7812629 7812794 -194515553 + G-rich Low_complexity Low_complexity 6 157 0 220 241 149 0 chr4 7812895 7812982 -194515365 - MIR SINE MIR -115 147 48 231 235 59 0 chr4 7813950 7814018 -194514329 - MIR SINE MIR -74 188 117 235 267 59 20 chr4 7814412 7814513 -194513834 - L2 LINE L2 -257 3015 2911 1582 254 67 22 chr4 7815690 7816283 -194512064 + L2 LINE L2 2458 3082 -231 402 75 0 0 chr4 7816326 7816379 -194511968 + MSTB LTR MaLR 1 53 -373 2198 98 0 3 chr4 7816391 7816686 -194511661 + AluSq SINE Alu 13 306 -7 800 320 57 30 chr4 7816716 7817154 -194511193 + ERVL LTR ERVL 470 919 -4077 1206 209 54 26 chr4 7817195 7817641 -194510706 + MLT1B LTR MaLR 1 390 0 507 319 165 19 chr4 7817715 7818079 -194510268 + ERVL LTR ERVL 1124 1540 -3456 1957 124 16 22 chr4 7818084 7818371 -194509976 + AluSq SINE Alu 1 287 -26 1029 96 17 17 chr4 7818371 7818549 -194509798 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 1957 124 16 22 chr4 7818549 7818575 -194509772 + AluSq SINE Alu 287 312 -1 588 136 32 26 chr4 7818575 7818729 -194509618 + GA-rich Low_complexity Low_complexity 1 155 0 903 110 24 12 chr4 7818768 7818932 -194509415 + GA-rich Low_complexity Low_complexity 1 166 0 935 275 42 0 chr4 7819005 7819245 -194509102 + ERVL LTR ERVL 1687 1936 -3060 854 222 76 28 chr4 7819247 7819550 -194508797 - MLT1F LTR MaLR -45 497 199 988 369 42 11 chr4 7819555 7820352 -194507995 + ERVL LTR ERVL 4509 5369 -395 719 209 83 109 chr4 7820494 7820694 -194507653 - MLT1G LTR MaLR -286 309 105 664 175 108 0 chr4 7820694 7820814 -194507533 + AluJo/FLAM SINE Alu 1 133 -169 1473 209 0 43 chr4 7820817 7821142 -194507205 + AluJo SINE Alu 1 311 -1 719 209 83 109 chr4 7821142 7821215 -194507132 - MLT1G LTR MaLR -492 103 72 5711 105 47 16 chr4 7821215 7822090 -194506257 + MER4D LTR ERV1 1 902 -1 719 209 83 109 chr4 7822090 7822159 -194506188 - MLT1G LTR MaLR -523 72 3 708 258 163 18 chr4 7822184 7822521 -194505826 - MLT1J2 LTR MaLR -45 405 20 213 200 20 0 chr4 7822937 7822987 -194505360 - MIR SINE MIR -138 124 74 297 279 70 0 chr4 7823000 7823086 -194505261 + MIR SINE MIR 59 150 -112 1802 155 3 7 chr4 7823088 7823384 -194504963 + AluJb SINE Alu 1 295 -17 28 29 0 0 chr4 7823854 7823889 -194504458 + GC_rich Low_complexity Low_complexity 1 35 0 322 298 0 66 chr4 7824176 7824297 -194504050 + MIR3 SINE MIR 42 154 -54 262 243 14 48 chr4 7824516 7824599 -194503748 + MIR SINE MIR 69 149 -59 341 243 180 9 chr4 7824617 7824728 -194503619 - MIR3 SINE MIR -65 143 14 324 203 158 40 chr4 7825641 7825818 -194502529 + MER102a DNA MER1_type 108 305 -25 330 261 61 17 chr4 7826275 7826390 -194501957 - MIR SINE MIR -110 152 33 539 225 9 9 chr4 7826532 7826643 -194501704 + L2 LINE L2 3201 3311 -2 260 270 36 22 chr4 7826744 7826881 -194501466 + L1MC4 LINE L1 7903 8041 -1 219 337 31 31 chr4 7826901 7826999 -194501348 - L2 LINE L2 -13 3300 3203 802 281 54 4 chr4 7827394 7827636 -194500711 + MIR SINE MIR 3 256 -6 1251 116 0 0 chr4 7827679 7827911 -194500436 + (CCA)n Simple_repeat Simple_repeat 1 232 0 1163 87 0 22 chr4 7827923 7828107 -194500240 + (CCA)n Simple_repeat Simple_repeat 1 180 0 699 164 0 48 chr4 7828123 7828312 -194500035 + (CCA)n Simple_repeat Simple_repeat 1 180 0 429 226 0 32 chr4 7828310 7828496 -194499851 + (CACCAT)n Simple_repeat Simple_repeat 1 180 0 * 310 304 105 49 chr4 7828548 7828755 -194499592 - MIR3 SINE MIR -41 221 12 214 315 99 43 chr4 7829781 7829943 -194498404 - MIR SINE MIR -44 218 48 421 307 67 32 chr4 7829993 7830182 -194498165 - MIR SINE MIR -43 219 20 2012 124 0 3 chr4 7831046 7831367 -194496980 - AluSx SINE Alu 0 320 1 319 119 34 0 chr4 7831415 7831474 -194496873 - FLAM_A SINE Alu -9 124 64 629 236 65 91 chr4 7831626 7832024 -194496323 - MLT1J2 LTR MaLR 0 450 63 543 246 5 64 chr4 7832024 7832211 -194496136 - MLT1J LTR MaLR -333 178 3 2303 207 105 18 chr4 7832272 7832939 -194495408 - MER50 LTR ERV1 0 734 10 277 250 52 86 chr4 7833010 7833126 -194495221 - MLT1L LTR MaLR -164 392 236 802 218 12 1 chr4 7833155 7833480 -194494867 - MER93b LTR ERV1 -8 365 1 240 316 0 13 chr4 7833507 7833583 -194494764 - MLT1L LTR MaLR -421 194 120 213 360 48 20 chr4 7834039 7834186 -194494161 + MIR SINE MIR 80 230 -32 1085 238 199 24 chr4 7834301 7834768 -194493579 - MLT1F1 LTR MaLR 0 567 19 1965 123 0 39 chr4 7834768 7835077 -194493270 - AluJo SINE Alu -4 308 12 1734 199 36 3 chr4 7835224 7835560 -194492787 + L1MB3 LINE L1 5834 6180 -3 205 191 0 0 chr4 7836417 7836459 -194491888 + T-rich Low_complexity Low_complexity 1 42 0 2117 118 0 16 chr4 7836472 7836787 -194491560 - AluSx SINE Alu -2 310 1 1423 177 3 79 chr4 7836840 7837168 -194491179 - MLT1B LTR MaLR -8 382 80 1922 110 45 0 chr4 7837170 7837460 -194490887 + AluSx SINE Alu 5 307 -5 255 314 25 17 chr4 7837472 7837590 -194490757 + L3 LINE CR1 1422 1540 -37 2077 127 3 7 chr4 7837961 7838268 -194490079 - AluSq SINE Alu -7 306 1 561 274 12 12 chr4 7838314 7838496 -194489851 - MIR SINE MIR -56 152 2 1651 162 45 10 chr4 7838525 7838815 -194489532 + AluJo SINE Alu 1 300 -12 1894 119 0 48 chr4 7838817 7839111 -194489236 + AluSx SINE Alu 1 280 -32 225 0 0 0 chr4 7839111 7839136 -194489211 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 1954 152 10 0 chr4 7839594 7839891 -194488456 + AluSx SINE Alu 1 300 -12 807 243 111 10 chr4 7839980 7840268 -194488079 - LTR53 LTR ERVL -7 512 196 561 292 70 11 chr4 7840575 7840760 -194487587 - MIR SINE MIR -21 241 46 187 262 16 16 chr4 7840807 7840868 -194487479 + MIR SINE MIR 31 91 -171 247 233 23 23 chr4 7840939 7841025 -194487322 - MIR SINE MIR -7 255 170 1620 147 56 0 chr4 7841074 7841340 -194487007 + AluJo SINE Alu 11 291 -21 996 180 0 14 chr4 7841467 7841678 -194486669 - MER96B DNA MER1_type? -206 211 4 192 282 117 29 chr4 7841770 7841873 -194486474 - MIR SINE MIR -131 131 20 252 242 242 25 chr4 7842317 7842474 -194485873 + MIR SINE MIR 44 234 -28 717 289 32 56 chr4 7842484 7842733 -194485614 - MIR SINE MIR -4 258 16 35 41 0 0 chr4 7842794 7842843 -194485504 + AT_rich Low_complexity Low_complexity 1 49 0 1707 85 51 0 chr4 7842888 7843123 -194485224 + AluSx SINE Alu 1 247 -65 228 282 190 14 chr4 7843708 7843850 -194484497 + L2 LINE L2 2918 3084 -188 237 300 187 27 chr4 7843964 7844114 -194484233 + MIR SINE MIR 75 248 -14 1557 208 103 3 chr4 7844114 7844474 -194483873 - MSTD LTR MaLR 0 396 1 260 363 112 28 chr4 7846311 7846490 -194481857 + MIR SINE MIR 44 237 -25 255 226 0 0 chr4 7846741 7846794 -194481553 + MIR SINE MIR 91 143 -119 256 299 11 20 chr4 7847158 7847281 -194481066 + MIR SINE MIR 29 152 -56 536 291 101 5 chr4 7847304 7847503 -194480844 - MIR SINE MIR 0 262 45 248 242 264 22 chr4 7847656 7847747 -194480600 + MER81 DNA DNA 1 113 -1 1597 145 3 35 chr4 7847819 7848102 -194480245 - AluJo SINE Alu -7 305 32 2487 43 3 7 chr4 7848108 7848411 -194479936 + AluY SINE Alu 1 302 -9 189 313 40 30 chr4 7848729 7848828 -194479519 - L2 LINE L2 -341 2972 2873 350 171 29 0 chr4 7848987 7849057 -194479290 + MIR SINE MIR 73 144 -118 277 258 45 0 chr4 7849562 7849628 -194478719 - MIR SINE MIR -90 172 104 732 272 60 44 chr4 7849628 7849949 -194478398 - MER21B LTR ERV1 -78 785 471 2040 117 17 3 chr4 7849949 7850248 -194478099 + AluSq SINE Alu 1 303 -10 732 272 60 44 chr4 7850248 7850401 -194477946 - MER21B LTR ERV1 -392 471 98 439 214 0 31 chr4 7850441 7850539 -194477808 - MER21B LTR ERV1 -768 95 1 1618 204 64 3 chr4 7850958 7851302 -194477045 - MLT1A1 LTR MaLR 0 365 1 1912 161 0 19 chr4 7851392 7851703 -194476644 - AluJb SINE Alu -7 305 1 205 313 31 0 chr4 7852023 7852087 -194476260 - L2 LINE L2 0 3272 3207 590 279 29 17 chr4 7852306 7852478 -194475869 - L2 LINE L2 -4 3309 3136 195 311 73 0 chr4 7852801 7852952 -194475395 - L2 LINE L2 -299 2973 2812 220 266 49 152 chr4 7853486 7853670 -194474677 + L3 LINE CR1 1177 1341 -236 190 286 0 0 chr4 7854384 7854433 -194473914 - MIR3 SINE MIR -21 187 139 233 256 0 0 chr4 7854435 7854478 -194473869 + (CCCA)n Simple_repeat Simple_repeat 2 44 0 641 235 6 0 chr4 7854482 7854661 -194473686 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 242 221 15 29 chr4 7854849 7854917 -194473430 + GA-rich Low_complexity Low_complexity 3 69 0 4405 161 48 18 chr4 7855648 7855917 -194472430 - L1MB7 LINE L1 -9 6175 5916 1840 149 20 10 chr4 7855917 7855932 -194472415 - AluJb SINE Alu -14 298 285 189 0 0 0 chr4 7855932 7855953 -194472394 + (ATTG)n Simple_repeat Simple_repeat 4 24 0 1840 149 20 10 chr4 7855953 7856232 -194472115 - AluJb SINE Alu -27 285 1 4405 161 48 18 chr4 7856232 7856927 -194471420 - L1MB7 LINE L1 -268 5916 5183 387 335 62 6 chr4 7857260 7857436 -194470911 + MIR SINE MIR 22 207 -55 2306 94 0 0 chr4 7858885 7859184 -194469163 - AluSx SINE Alu -13 299 1 344 260 199 22 chr4 7859225 7859406 -194468941 + MIR SINE MIR 13 225 -37 212 284 25 25 chr4 7859429 7859510 -194468837 - MIR SINE MIR -181 81 1 474 229 76 0 chr4 7860111 7860229 -194468118 - MIR3 SINE MIR -24 184 58 1092 129 0 45 chr4 7860364 7860542 -194467805 + AluSg/x SINE Alu 134 303 -9 287 279 93 0 chr4 7860898 7860984 -194467363 - L2 LINE L2 0 3272 3179 420 271 104 70 chr4 7861511 7861894 -194466453 - MLT1K LTR MaLR -8 580 185 1569 171 59 14 chr4 7862034 7862321 -194466026 + AluJo SINE Alu 1 300 -12 318 233 0 0 chr4 7862321 7862381 -194465966 + G-rich Low_complexity Low_complexity 3 62 0 725 132 36 18 chr4 7862383 7862608 -194465739 + GA-rich Low_complexity Low_complexity 1 229 0 254 302 71 8 chr4 7862623 7862749 -194465598 + MIR3 SINE MIR 65 198 -10 281 326 109 0 chr4 7863171 7863318 -194465029 - MIR3 SINE MIR -21 187 25 214 341 35 0 chr4 7863520 7863605 -194464742 - L2 LINE L2 -51 3262 3175 187 374 36 0 chr4 7863730 7863813 -194464534 + L2 LINE L2 3137 3222 -50 884 168 0 31 chr4 7863845 7864006 -194464341 + AluJo SINE Alu 5 160 -152 1911 133 3 14 chr4 7864242 7864535 -194463812 + AluJo SINE Alu 1 290 -22 2140 122 0 0 chr4 7864535 7864831 -194463516 - AluSx SINE Alu -16 296 1 196 333 0 17 chr4 7864845 7864897 -194463450 - MER5B DNA MER1_type -52 126 76 244 328 117 14 chr4 7864897 7865038 -194463309 + MIR SINE MIR 3 156 -61 337 284 35 0 chr4 7865108 7865224 -194463123 - MLT1I LTR MaLR 0 409 290 388 185 33 0 chr4 7865309 7865401 -194462946 - MLT1I LTR MaLR -240 169 75 373 252 89 0 chr4 7865505 7865628 -194462719 + MIR SINE MIR 38 171 -91 2877 86 0 0 chr4 7865632 7865993 -194462354 - THE1B LTR MaLR -2 362 2 1608 175 3 30 chr4 7866400 7866575 -194461772 - AluSx SINE Alu -8 304 139 2233 96 0 7 chr4 7866575 7866877 -194461470 - AluSp SINE Alu -13 300 1 1608 175 3 30 chr4 7866877 7866998 -194461349 - AluSx SINE Alu -173 139 16 297 310 92 7 chr4 7867108 7867250 -194461097 + MIR SINE MIR 29 182 -80 199 292 46 46 chr4 7867715 7867780 -194460567 - MIR3 SINE MIR -33 175 111 243 346 98 0 chr4 7868391 7868544 -194459803 + MIR SINE MIR 59 226 -36 200 365 31 0 chr4 7869305 7869401 -194458946 + L2 LINE L2 3173 3271 -1 * 249 83 0 0 chr4 7869389 7869425 -194458922 + (GGGA)n Simple_repeat Simple_repeat 1 36 0 2134 197 90 12 chr4 7870638 7871159 -194457188 + L1MB7 LINE L1 5601 6165 -19 2062 128 10 0 chr4 7871167 7871463 -194456884 - AluSx SINE Alu -13 299 1 1879 101 59 21 chr4 7871803 7872090 -194456257 + AluSx SINE Alu 1 298 -14 1744 166 17 7 chr4 7872103 7872398 -194455949 + AluJo SINE Alu 1 298 -14 1852 177 0 3 chr4 7872643 7872948 -194455399 - AluJo SINE Alu -1 311 8 267 104 0 0 chr4 7872957 7873005 -194455342 + (T)n Simple_repeat Simple_repeat 1 48 0 946 134 8 0 chr4 7873106 7873240 -194455107 + AluSq/x SINE Alu 1 135 -177 2311 85 3 0 chr4 7873240 7873534 -194454813 + AluSp SINE Alu 1 295 -18 207 0 0 0 chr4 7873534 7873557 -194454790 + (CA)n Simple_repeat Simple_repeat 2 24 0 1092 176 40 9 chr4 7873565 7873593 -194454754 - MLT1A1 LTR MaLR -2 363 337 2098 50 46 8 chr4 7873593 7873853 -194454494 + AluY SINE Alu 27 296 -15 1092 176 40 9 chr4 7873853 7874051 -194454296 - MLT1A1 LTR MaLR -28 337 130 1088 184 16 5 chr4 7874253 7874443 -194453904 + AluJb SINE Alu 43 234 -78 1885 138 3 7 chr4 7874512 7874795 -194453552 + AluJb SINE Alu 31 312 0 631 139 9 0 chr4 7875110 7875218 -194453129 - MLT1A1 LTR MaLR -256 109 1 2472 64 3 3 chr4 7875273 7875568 -194452779 + AluSp SINE Alu 1 295 -18 831 282 55 51 chr4 7875706 7875997 -194452350 + L1ME3A LINE L1 5370 5658 -512 1985 117 0 87 chr4 7875997 7876152 -194452195 + AluSx SINE Alu 1 114 -198 2524 46 0 0 chr4 7876152 7876471 -194451876 + AluY SINE Alu 1 319 0 1985 117 0 87 chr4 7876471 7876647 -194451700 + AluSx SINE Alu 114 304 -8 831 282 55 51 chr4 7876647 7876784 -194451563 + L1ME3A LINE L1 5658 5803 -367 903 250 5 0 chr4 7876784 7876972 -194451375 + MER5A DNA MER1_type 1 189 0 831 282 55 51 chr4 7876972 7877031 -194451316 + L1ME3A LINE L1 5803 5860 -310 293 19 74 0 chr4 7877048 7877102 -194451245 + (TAGA)n Simple_repeat Simple_repeat 3 60 0 297 195 65 0 chr4 7877104 7877181 -194451166 + L1ME3A LINE L1 5869 5950 -220 1993 152 16 10 chr4 7877250 7877560 -194450787 + AluJb SINE Alu 1 312 0 532 131 9 9 chr4 7877562 7877669 -194450678 + (GGGAA)n Simple_repeat Simple_repeat 4 110 0 23 0 0 0 chr4 7877937 7877960 -194450387 + AT_rich Low_complexity Low_complexity 1 23 0 246 328 76 0 chr4 7878102 7878221 -194450126 + MLT1J LTR MaLR 1 128 -383 656 233 43 67 chr4 7878280 7878493 -194449854 + MLT1H1 LTR MaLR 309 517 -38 1851 164 3 7 chr4 7878493 7878786 -194449561 + AluJb SINE Alu 1 292 -20 656 233 43 67 chr4 7878786 7878825 -194449522 + MLT1H1 LTR MaLR 517 555 0 2536 73 0 13 chr4 7878993 7879307 -194449040 - AluY SINE Alu -1 310 1 655 269 0 0 chr4 7879838 7879994 -194448353 - MLT1A2 LTR MaLR -4 370 215 629 156 57 8 chr4 7880037 7880159 -194448188 + LTR31 LTR ERV1 1 128 -491 886 235 0 0 chr4 7880159 7880325 -194448022 - FRAM SINE Alu -10 166 1 3434 123 6 0 chr4 7880325 7880830 -194447517 + LTR31 LTR ERV1 112 619 0 926 233 5 9 chr4 7880830 7881045 -194447302 - MLT1A2 LTR MaLR -160 214 1 2143 157 89 33 chr4 7881134 7881352 -194446995 - MER66B LTR ERV1 -7 479 275 2174 122 0 3 chr4 7881352 7881646 -194446701 - AluSx SINE Alu -19 293 1 2143 157 89 33 chr4 7881646 7881878 -194446469 - MER66B LTR ERV1 -211 275 4 514 226 77 70 chr4 7882628 7882720 -194445627 + L1M4 LINE L1 2789 2879 -3267 2242 101 26 13 chr4 7882720 7883028 -194445319 - AluSq SINE Alu -1 312 1 514 226 77 70 chr4 7883028 7883297 -194445050 + L1M4 LINE L1 2879 3156 -2990 2147 132 7 0 chr4 7883297 7883593 -194444754 + AluSx SINE Alu 1 298 -14 514 226 77 70 chr4 7883593 7883633 -194444714 + L1M4 LINE L1 3156 3194 -2952 4642 161 36 7 chr4 7883817 7884677 -194443670 - L1MC1 LINE L1 -20 6313 5429 1730 86 49 34 chr4 7884737 7884781 -194443566 - MER4A LTR ERV1 0 664 622 13320 27 1 0 chr4 7884781 7887108 -194441239 + L1PA3 LINE L1 3828 6155 0 1730 86 49 34 chr4 7887108 7887624 -194440723 - MER4A LTR ERV1 -42 622 1 886 186 6 6 chr4 7888168 7888329 -194440018 + FRAM SINE Alu 1 161 -5 2594 71 0 0 chr4 7888355 7888666 -194439681 + AluY SINE Alu 1 311 0 1987 132 20 0 chr4 7888781 7889084 -194439263 - AluSx SINE Alu -1 311 3 1101 294 68 17 chr4 7891793 7892205 -194436142 + LTR16A LTR ERVL 8 440 -10 530 149 76 13 chr4 7892489 7892606 -194435741 - L1MD3 LINE L1 -125 7870 7694 1238 159 50 50 chr4 7892766 7893024 -194435323 - AluJb SINE Alu -13 299 42 641 212 0 8 chr4 7893052 7893184 -194435163 - FLAM_C SINE Alu -2 131 1 388 275 134 23 chr4 7893190 7893361 -194434986 - L1MC4a LINE L1 -1865 5943 5754 1868 130 0 4 chr4 7893592 7893882 -194434465 - AluSx SINE Alu 0 310 22 1272 255 101 13 chr4 7893935 7894311 -194434036 + MLT1I LTR MaLR 1 409 0 2440 67 100 0 chr4 7894671 7895012 -194433335 + THE1C LTR MaLR 1 375 0 193 357 88 39 chr4 7895033 7895316 -194433031 + L2 LINE L2 157 453 -2861 263 333 157 12 chr4 7895327 7895576 -194432771 - L2 LINE L2 -2186 1128 844 230 258 212 61 chr4 7895679 7895811 -194432536 - MIR SINE MIR -10 252 101 249 352 101 48 chr4 7895823 7896261 -194432086 - L2 LINE L2 -2493 821 361 268 230 46 35 chr4 7896444 7896531 -194431816 - LTR16B LTR ERVL -342 122 35 2590 65 0 0 chr4 7896934 7897240 -194431107 - AluY SINE Alu -5 306 1 1678 153 11 28 chr4 7897253 7897535 -194430812 - AluJb SINE Alu 0 312 36 495 211 83 0 chr4 7897862 7897971 -194430376 - MLT1F1 LTR MaLR -437 130 13 2407 130 77 70 chr4 7898039 7898291 -194430056 + MER66B LTR ERV1 1 250 -236 2148 123 3 7 chr4 7898291 7898593 -194429754 - AluSg SINE Alu -7 303 3 2222 117 3 7 chr4 7898595 7898893 -194429454 - AluSx SINE Alu -14 298 2 2407 130 77 70 chr4 7898893 7899120 -194429227 + MER66B LTR ERV1 250 486 0 341 283 87 60 chr4 7899131 7899315 -194429032 + L1M4 LINE L1 4214 4402 -1744 1396 206 151 8 chr4 7899333 7899731 -194428616 - MLT1C LTR MaLR -7 460 6 21 0 0 0 chr4 7899759 7899780 -194428567 + AT_rich Low_complexity Low_complexity 1 21 0 1991 162 0 10 chr4 7899966 7900274 -194428073 + AluJo SINE Alu 1 305 -7 1349 178 5 0 chr4 7900284 7900497 -194427850 + AluJb SINE Alu 1 214 -98 361 299 82 25 chr4 7900525 7900769 -194427578 + L1M4 LINE L1 4641 4898 -1248 2061 86 61 4 chr4 7900793 7901073 -194427274 + AluSc SINE Alu 8 303 -6 333 295 67 35 chr4 7901095 7901349 -194426998 + L1M4 LINE L1 4904 5165 -981 556 136 31 117 chr4 7901349 7901511 -194426836 + L1MB5 LINE L1 5682 5829 -345 2153 129 7 0 chr4 7901512 7901822 -194426525 + AluSx SINE Alu 1 312 0 953 175 6 0 chr4 7901828 7901994 -194426353 + MLT1B LTR MaLR 224 390 0 366 150 87 0 chr4 7902745 7902872 -194425475 + (CAGG)n Simple_repeat Simple_repeat 3 140 0 229 234 0 0 chr4 7903146 7903193 -194425154 + MIR SINE MIR 216 262 0 370 279 31 8 chr4 7903218 7903347 -194425000 + MLT1G LTR MaLR 10 141 -449 1700 160 43 69 chr4 7903372 7903527 -194424820 + MLT1A1 LTR MaLR 1 159 -206 2304 98 0 7 chr4 7903527 7903834 -194424513 + AluSc SINE Alu 1 305 -4 1700 160 43 69 chr4 7903834 7904053 -194424294 + MLT1A1 LTR MaLR 159 365 0 296 133 0 0 chr4 7904796 7904841 -194423506 + Alu SINE Alu 1 45 -255 251 175 53 35 chr4 7904818 7904896 -194423451 + AluYb8 SINE Alu 243 321 0 * 483 225 42 7 chr4 7904909 7905051 -194423296 + L1ME2 LINE L1 5944 6090 -74 293 253 103 11 chr4 7905208 7905295 -194423052 + MIR SINE MIR 79 173 -89 1644 179 3 35 chr4 7905529 7905851 -194422496 + AluJb SINE Alu 1 313 0 703 272 42 89 chr4 7906383 7906743 -194421604 + MLT1J LTR MaLR 6 348 -163 402 289 177 15 chr4 7906833 7907093 -194421254 + L2 LINE L2 2359 2660 -654 266 221 116 0 chr4 7907512 7907598 -194420749 + L2 LINE L2 2903 2998 -274 900 184 6 12 chr4 7907606 7907769 -194420578 - AluJb SINE Alu -17 295 134 2637 43 0 0 chr4 7907769 7908070 -194420277 - AluY SINE Alu -10 301 1 1614 166 29 37 chr4 7908073 7908423 -194419924 - MLT2C1 LTR ERVL -50 347 1 323 255 170 0 chr4 7909447 7909541 -194418806 - MIR SINE MIR -65 143 34 817 211 0 87 chr4 7910511 7910719 -194417628 - MIR SINE MIR -40 222 33 387 259 45 9 chr4 7910891 7911003 -194417344 - MIR SINE MIR -64 144 29 226 286 14 0 chr4 7911309 7911379 -194416968 + MIR SINE MIR 46 116 -92 604 273 0 0 chr4 7911621 7911753 -194416594 + MIR SINE MIR 15 146 -116 206 339 0 0 chr4 7911892 7911951 -194416396 - MIR SINE MIR -92 116 58 370 328 110 39 chr4 7912270 7912605 -194415742 - L2 LINE L2 -24 3248 2890 695 138 8 8 chr4 7912732 7912855 -194415492 - MLT1D LTR MaLR -374 131 9 543 265 162 5 chr4 7913034 7913219 -194415128 + MIR SINE MIR 48 261 -1 578 299 95 4 chr4 7914116 7914347 -194414000 + MIR SINE MIR 8 259 -3 1916 157 3 19 chr4 7914466 7914779 -194413568 + AluJo SINE Alu 1 308 -4 2848 145 19 0 chr4 7914784 7915254 -194413093 + L1MB3 LINE L1 5700 6178 -5 1841 106 0 0 chr4 7915279 7915516 -194412831 + AluSx SINE Alu 1 237 -75 803 106 15 0 chr4 7915528 7915660 -194412687 + (GAAA)n Simple_repeat Simple_repeat 3 136 0 2213 77 20 13 chr4 7916685 7916984 -194411363 - AluY SINE Alu -10 301 1 290 350 36 0 chr4 7917132 7917269 -194411078 + MIR SINE MIR 64 205 -57 372 346 104 37 chr4 7917349 7917933 -194410414 + L2 LINE L2 2626 3255 -17 27 29 0 0 chr4 7917991 7918025 -194410322 + AT_rich Low_complexity Low_complexity 1 34 0 1915 136 7 27 chr4 7918054 7918349 -194409998 - AluJo SINE Alu -17 295 7 2463 73 7 0 chr4 7918648 7918949 -194409398 + AluSc SINE Alu 1 303 -6 1553 180 74 0 chr4 7919781 7920065 -194408282 - AluJb SINE Alu -7 305 1 315 286 60 0 chr4 7920497 7920581 -194407766 + MIR SINE MIR 172 260 -2 2459 80 0 3 chr4 7920706 7921018 -194407329 - AluY SINE Alu 0 311 1 2215 116 3 3 chr4 7921018 7921319 -194407028 - AluSg SINE Alu -9 301 1 2125 142 6 6 chr4 7921494 7921805 -194406542 + AluJb SINE Alu 1 311 -1 35 0 0 0 chr4 7922101 7922136 -194406211 + AT_rich Low_complexity Low_complexity 1 35 0 1866 148 41 7 chr4 7922140 7922431 -194405916 - AluJb SINE Alu -10 302 2 2199 112 10 3 chr4 7922663 7922966 -194405381 - AluSx SINE Alu -7 305 1 2153 148 0 10 chr4 7923063 7923374 -194404973 - AluJb SINE Alu -2 310 3 2359 112 45 25 chr4 7923567 7923924 -194404423 + THE1B LTR MaLR 1 364 0 314 240 116 29 chr4 7923964 7924111 -194404236 - L1ME LINE L1 -302 5819 5660 534 207 140 61 chr4 7924341 7924429 -194403918 + MER45A DNA AcHobo 1 81 -1500 2457 76 13 3 chr4 7924429 7924733 -194403614 - AluY SINE Alu -4 307 1 534 207 140 61 chr4 7924733 7924808 -194403539 + MER45A DNA AcHobo 81 177 -1 200 98 0 49 chr4 7924903 7924944 -194403403 + (TTAA)n Simple_repeat Simple_repeat 2 40 0 463 337 28 29 chr4 7925468 7925720 -194402627 - MIR SINE MIR -6 256 3 208 265 0 0 chr4 7925725 7925774 -194402573 - L2 LINE L2 0 3313 3265 853 276 86 19 chr4 7925774 7926188 -194402159 - LTR16B LTR ERVL -26 438 11 671 267 165 43 chr4 7926223 7926782 -194401565 - L2 LINE L2 -122 3191 2702 1116 161 79 57 chr4 7926782 7926814 -194401533 + MER33 DNA MER1_type 2 32 -2553 2236 95 0 7 chr4 7926814 7927119 -194401228 - AluY SINE Alu 0 303 1 1116 161 79 57 chr4 7927119 7927346 -194401001 + MER33 DNA MER1_type 32 273 -2312 1476 229 14 0 chr4 7927346 7927638 -194400709 - AluJo SINE Alu -16 296 1 1116 161 79 57 chr4 7927638 7927692 -194400655 + MER33 DNA MER1_type 273 324 0 671 267 165 43 chr4 7927692 7927821 -194400526 - L2 LINE L2 -611 2702 2028 2200 137 0 0 chr4 7927989 7928289 -194400058 - AluSx SINE Alu -12 300 1 2057 129 13 20 chr4 7929235 7929537 -194398810 + AluJo SINE Alu 1 300 -12 2339 68 44 0 chr4 7929537 7929833 -194398514 + AluYa5 SINE Alu 1 309 -2 1769 166 10 3 chr4 7930310 7930599 -194397748 - AluJo SINE Alu -21 291 1 1942 207 16 58 chr4 7930680 7931167 -194397180 - MLT1C LTR MaLR 0 467 1 2297 96 0 0 chr4 7931432 7931735 -194396612 - AluSc SINE Alu -1 308 6 2196 102 0 0 chr4 7931771 7932076 -194396271 - AluSx SINE Alu 0 334 30 2273 111 3 0 chr4 7932147 7932445 -194395902 + AluSx SINE Alu 1 299 -13 911 155 67 21 chr4 7932871 7933065 -194395282 + MER3 DNA MER1_type 7 209 0 1662 176 59 3 chr4 7933154 7933443 -194394904 + AluJo SINE Alu 1 305 -7 472 255 220 56 chr4 7933786 7934123 -194394224 - LTR16A LTR ERVL 0 450 59 1325 203 0 81 chr4 7934624 7934945 -194393402 + AluJo SINE Alu 2 296 -6 216 0 0 0 chr4 7934952 7934976 -194393371 + (TA)n Simple_repeat Simple_repeat 2 25 0 180 0 0 0 chr4 7936677 7936697 -194391650 + (TGAA)n Simple_repeat Simple_repeat 3 22 0 324 240 80 20 chr4 7936701 7936801 -194391546 - MER103 DNA DNA -46 120 15 329 193 44 104 chr4 7937620 7937755 -194390592 - L1M3c LINE L1 -4824 1317 1191 2443 82 0 13 chr4 7938208 7938514 -194389833 + AluY SINE Alu 9 310 -1 619 266 0 0 chr4 7938755 7938768 -194389579 - FLAM_A SINE Alu -174 128 116 492 62 0 0 chr4 7938768 7938832 -194389515 + (TCTA)n Simple_repeat Simple_repeat 1 64 0 619 266 0 0 chr4 7938832 7938946 -194389401 - FLAM_A SINE Alu -185 117 1 2196 125 20 0 chr4 7939539 7939836 -194388511 + AluSx SINE Alu 1 303 -9 186 368 11 23 chr4 7940337 7940424 -194387923 + L2 LINE L2 3187 3272 0 601 291 42 42 chr4 7941050 7941311 -194387036 + MLT1I LTR MaLR 79 339 -70 6268 166 8 26 chr4 7941311 7943131 -194385216 + L1MA4A LINE L1 4125 5912 -391 262 140 70 18 chr4 7943133 7943190 -194385157 + L1MA4A LINE L1 6208 6267 -36 1927 159 0 7 chr4 7943191 7943492 -194384855 - AluJb SINE Alu -13 299 1 225 0 0 0 chr4 7943495 7943520 -194384827 + (T)n Simple_repeat Simple_repeat 1 25 0 297 192 96 0 chr4 7943520 7943593 -194384754 + MLT1I LTR MaLR 323 402 -7 768 158 267 0 chr4 7943982 7944147 -194384200 + MER3 DNA MER1_type 1 209 0 230 269 90 27 chr4 7944172 7944395 -194383952 + L1ME4a LINE L1 5862 6098 -23 2583 62 3 0 chr4 7945099 7945408 -194382939 - AluY SINE Alu -1 310 1 1974 144 3 19 chr4 7947084 7947396 -194380951 + AluJb SINE Alu 1 307 -5 262 296 169 35 chr4 7947804 7947946 -194380401 - L2 LINE L2 -20 3293 3133 496 209 82 38 chr4 7948010 7948168 -194380179 + MIR SINE MIR 39 203 -59 267 267 61 38 chr4 7948249 7948380 -194379967 - LTR16A1 LTR ERVL -59 398 265 995 275 131 31 chr4 7948384 7948872 -194379475 + MLT1F LTR MaLR 1 537 -5 368 269 91 21 chr4 7948882 7949087 -194379260 - LTR16A LTR ERVL -197 253 3 2537 53 0 0 chr4 7949691 7949990 -194378357 + AluY SINE Alu 2 300 -11 526 298 5 2 chr4 7950170 7950913 -194377434 + (CA)n Simple_repeat Simple_repeat 1 745 0 2523 31 7 3 chr4 7950964 7951253 -194377094 - AluY SINE Alu -14 297 8 2517 45 0 0 chr4 7951827 7952117 -194376230 - AluY SINE Alu -10 301 12 2656 51 3 0 chr4 7952163 7952474 -194375873 - AluSp SINE Alu -1 312 1 1489 164 114 0 chr4 7952743 7953042 -194375305 + MLT1A1 LTR MaLR 19 351 -14 2242 84 0 0 chr4 7953183 7953456 -194374891 - AluSq SINE Alu -11 302 30 526 214 170 12 chr4 7953478 7953738 -194374609 - MLT1G1 LTR MaLR -285 270 5 1986 139 10 10 chr4 7954384 7954679 -194373668 + AluJb SINE Alu 1 295 -17 254 289 49 63 chr4 7954921 7955063 -194373284 - MLT1H LTR MaLR -3 546 407 189 256 156 22 chr4 7955279 7955369 -194372978 + L2 LINE L2 1453 1554 -1760 544 178 0 37 chr4 7955675 7955782 -194372565 - MER58C DNA MER1_type 0 215 113 719 178 94 42 chr4 7956375 7956389 -194371958 + MLT1E2 LTR MaLR 160 172 -454 1974 196 8 3 chr4 7956389 7956752 -194371595 - MLT1A1 LTR MaLR 0 365 1 719 178 94 42 chr4 7956752 7956928 -194371419 + MLT1E2 LTR MaLR 172 360 -266 329 298 70 0 chr4 7957023 7957137 -194371210 - L2 LINE L2 -7 3306 3185 209 219 146 37 chr4 7957208 7957290 -194371057 - L2 LINE L2 -60 3212 3122 1749 139 19 38 chr4 7957505 7957821 -194370526 - AluJb SINE Alu -2 310 1 3736 148 109 25 chr4 7957847 7958744 -194369603 + pTR5 LTR ERV1 743 2025 -413 276 250 31 0 chr4 7958744 7958840 -194369507 + LTR30 LTR ERV1 544 642 -80 1398 90 57 5 chr4 7958843 7959055 -194369292 + pTR5 LTR ERV1 172 394 -2044 214 289 0 0 chr4 7959213 7959265 -194369082 + (CG)n Simple_repeat Simple_repeat 2 53 0 24 0 0 0 chr4 7959579 7959603 -194368744 + GC_rich Low_complexity Low_complexity 1 24 0 869 168 0 0 chr4 7961754 7961885 -194366462 + FLAM_C SINE Alu 1 131 -2 199 278 19 0 chr4 7961902 7961956 -194366391 + MIR SINE MIR 203 257 -5 235 251 148 64 chr4 7961982 7962312 -194366035 - L2 LINE L2 -148 3165 2808 387 218 0 30 chr4 7962512 7962613 -194365734 + MER94 DNA DNA 16 113 -21 251 191 103 0 chr4 7963151 7963219 -194365128 - MIR SINE MIR -66 196 122 2895 22 0 0 chr4 7963348 7963666 -194364681 - AluYb8 SINE Alu 0 318 1 194 321 90 80 chr4 7964010 7964321 -194364026 - L2 LINE L2 0 3272 2959 2439 92 0 0 chr4 7964325 7964630 -194363717 + AluY SINE Alu 1 305 -6 249 351 192 0 chr4 7964884 7965035 -194363312 + MIR3 SINE MIR 16 195 -13 238 308 68 0 chr4 7965570 7965687 -194362660 - HAL1 LINE L1 -892 1615 1491 355 276 0 29 chr4 7965788 7965893 -194362454 + L2 LINE L2 2867 2968 -345 283 283 79 28 chr4 7965919 7966096 -194362251 - L2 LINE L2 -1508 1806 1621 232 315 47 63 chr4 7967326 7967453 -194360894 + MIR SINE MIR 66 190 -72 2320 89 23 3 chr4 7967521 7967824 -194360523 + AluSx SINE Alu 1 309 -3 304 303 7 49 chr4 7967866 7968008 -194360339 + L1M4 LINE L1 3841 3976 -2170 1508 115 161 31 chr4 7968951 7969211 -194359136 + AluJo SINE Alu 1 294 -18 2270 85 10 10 chr4 7969225 7969520 -194358827 - AluSx SINE Alu -17 295 1 180 0 0 0 chr4 7970420 7970440 -194357907 + (TG)n Simple_repeat Simple_repeat 1 20 0 1636 180 109 3 chr4 7970487 7970853 -194357494 - MLT2C2 LTR ERVL -55 409 5 372 186 202 23 chr4 7970891 7971020 -194357327 - MIR SINE MIR -78 184 33 328 294 37 28 chr4 7971516 7971625 -194356722 - MIR3 SINE MIR -38 170 61 911 103 0 0 chr4 7971821 7971938 -194356409 - FLAM_C SINE Alu -18 125 9 1715 183 40 71 chr4 7972711 7973133 -194355214 - LTR2 LTR ERV1 0 449 41 440 306 36 10 chr4 7973245 7973441 -194354906 + L2 LINE L2 2976 3176 -96 1149 240 120 8 chr4 7973817 7974217 -194354130 + MLT1C LTR MaLR 22 466 -1 227 325 48 0 chr4 7974727 7974810 -194353537 + MIR3 SINE MIR 92 178 -30 2336 80 11 0 chr4 7976018 7976305 -194352042 - AluSx SINE Alu -11 301 12 1016 167 0 0 chr4 7976635 7976797 -194351550 + FRAM SINE Alu 1 160 -16 2257 109 3 0 chr4 7976800 7977113 -194351234 + AluSx SINE Alu 1 314 0 1259 115 82 0 chr4 7977132 7977315 -194351032 + AluSg/x SINE Alu 81 278 -32 216 0 0 0 chr4 7977316 7977340 -194351007 + (CAAA)n Simple_repeat Simple_repeat 1 24 0 261 163 0 0 chr4 7977343 7977392 -194350955 + (TATATG)n Simple_repeat Simple_repeat 6 54 0 349 216 53 0 chr4 7977393 7977495 -194350852 + L1MC4 LINE L1 1996 6980 -1342 1709 206 73 23 chr4 7978118 7978681 -194349666 + MER39B LTR ERV1 1 649 -4 280 306 0 24 chr4 7980041 7980126 -194348221 + CT-rich Low_complexity Low_complexity 5 87 0 2158 141 0 3 chr4 7980258 7980571 -194347776 - AluJb SINE Alu 0 312 1 255 304 22 11 chr4 7981637 7981729 -194346618 + MIR SINE MIR 47 139 -69 2252 99 0 7 chr4 7982848 7983141 -194345206 - AluSq SINE Alu -17 296 6 2544 70 0 0 chr4 7983158 7983460 -194344887 - AluY SINE Alu -7 304 3 436 221 0 0 chr4 7983979 7984065 -194344282 - AluJ/FRAM SINE Alu -9 303 218 1922 114 0 67 chr4 7984065 7984381 -194343966 - AluY SINE Alu -16 295 1 836 160 8 0 chr4 7984382 7984507 -194343840 - AluJo/FLAM SINE Alu -186 126 1 304 263 61 26 chr4 7984599 7984713 -194343634 + LTR67 LTR ERVL 109 226 -331 1973 161 0 13 chr4 7985258 7985574 -194342773 - AluJo SINE Alu 0 312 1 329 247 43 99 chr4 7985577 7985739 -194342608 - L1ME LINE L1 -294 5827 5675 770 176 15 0 chr4 7985748 7985879 -194342468 - FLAM_C SINE Alu 0 133 1 1773 184 48 39 chr4 7985957 7986392 -194341955 - L1MB2 LINE L1 -2 6169 5731 2365 68 0 0 chr4 7986395 7986733 -194341614 - AluSx SINE Alu 0 312 1 1982 115 10 20 chr4 7987021 7987326 -194341021 - AluSx SINE Alu -10 302 1 502 241 97 14 chr4 7987392 7987586 -194340761 - L1MC4 LINE L1 -132 7910 7697 2282 108 3 0 chr4 7987586 7987882 -194340465 - AluSx SINE Alu -15 297 1 502 241 97 14 chr4 7987882 7987894 -194340453 - L1MC4 LINE L1 -345 7697 7687 304 182 15 0 chr4 7987887 7987953 -194340394 - L1MC4a LINE L1 -584 7224 7158 * 2041 237 15 46 chr4 7987932 7988539 -194339808 - L1MC4 LINE L1 -937 7105 6518 360 59 0 0 chr4 7988895 7988946 -194339401 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 3173 202 36 11 chr4 7989144 7989779 -194338568 - MER82 DNA MER2_type -2 651 1 549 231 30 30 chr4 7990160 7990329 -194338018 + L2 LINE L2 3144 3312 -1 337 280 272 29 chr4 7990358 7990601 -194337746 - L2 LINE L2 -571 2743 2442 859 284 153 6 chr4 7990671 7990991 -194337356 - L2 LINE L2 0 3313 2947 313 307 64 42 chr4 7991037 7991301 -194337046 + HsTC2 DNA Tc2 496 765 -1133 263 281 37 0 chr4 7991524 7991606 -194336741 + (TATG)n Simple_repeat Simple_repeat 3 87 0 380 301 81 43 chr4 7991684 7991870 -194336477 + MLT1I LTR MaLR 217 409 0 257 190 76 38 chr4 7995477 7995556 -194332791 - MIR SINE MIR -21 241 160 261 350 87 0 chr4 7995871 7995974 -194332373 + L2 LINE L2 3144 3255 -17 2009 222 38 12 chr4 7996248 7996609 -194331738 + L1ME LINE L1 5167 5552 -610 1315 193 60 83 chr4 7996609 7997008 -194331339 - MLT1B LTR MaLR 0 390 1 2009 222 38 12 chr4 7997008 7997241 -194331106 + L1ME LINE L1 5552 5778 -384 261 206 82 27 chr4 7997262 7997326 -194331021 - MLT1F1 LTR MaLR -4 563 496 1725 151 20 87 chr4 7997326 7997539 -194330808 - MLT1A1 LTR MaLR 0 365 139 2415 96 0 0 chr4 7997539 7997840 -194330507 - AluSq SINE Alu -12 301 1 1725 151 20 87 chr4 7997840 7997852 -194330495 - MLT1A1 LTR MaLR -226 139 128 1597 172 34 30 chr4 7997852 7998149 -194330198 - AluJo SINE Alu -14 298 1 1725 151 20 87 chr4 7998149 7998243 -194330104 - MLT1A1 LTR MaLR -237 128 73 2818 118 34 0 chr4 7998243 7998657 -194329690 - MSTA LTR MaLR 0 428 1 1725 151 20 87 chr4 7998657 7998726 -194329621 - MLT1A1 LTR MaLR -292 73 1 930 218 102 9 chr4 7998739 7998964 -194329383 - MLT1F1 LTR MaLR -121 446 201 1641 112 0 92 chr4 7998965 7999269 -194329078 - MER4A LTR ERV1 0 664 389 186 43 0 0 chr4 7999269 7999292 -194329055 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 2081 116 14 0 chr4 7999298 7999602 -194328745 - AluSx SINE Alu 0 310 3 272 180 20 0 chr4 7999629 7999679 -194328668 - MER4A LTR ERV1 -351 313 263 574 184 0 0 chr4 7999681 7999779 -194328568 - MER4A LTR ERV1 -566 98 1 434 246 22 93 chr4 7999793 7999976 -194328371 - MLT1F1 LTR MaLR -370 172 3 444 245 15 110 chr4 8000098 8000298 -194328049 - MLT1F1-int LTR MaLR -84 1287 1107 518 309 6 12 chr4 8000583 8000745 -194327602 - MLT1F1-int LTR MaLR -510 861 701 478 271 41 58 chr4 8001077 8001270 -194327077 + L1ME3 LINE L1 6009 6162 0 242 356 12 6 chr4 8001313 8001473 -194326874 + (CG)n Simple_repeat Simple_repeat 2 162 0 213 211 0 18 chr4 8001667 8001724 -194326623 + (CCGCG)n Simple_repeat Simple_repeat 4 59 0 23 0 0 0 chr4 8001733 8001756 -194326591 + GC_rich Low_complexity Low_complexity 1 23 0 713 149 18 0 chr4 8002363 8002477 -194325870 - FLAM_A SINE Alu -17 116 1 21 0 0 0 chr4 8002710 8002731 -194325616 + AT_rich Low_complexity Low_complexity 1 21 0 2535 50 0 40 chr4 8003122 8003445 -194324902 - AluY SINE Alu -1 310 1 1808 98 84 42 chr4 8003977 8004264 -194324083 + AluY SINE Alu 1 299 -12 634 227 64 36 chr4 8004320 8004540 -194323807 + L2 LINE L2 2560 2785 -529 2121 123 0 3 chr4 8005206 8005499 -194322848 + AluJo SINE Alu 4 295 -17 311 297 95 34 chr4 8006073 8006221 -194322126 + L2 LINE L2 3155 3311 -2 231 61 0 0 chr4 8006797 8006830 -194321517 + (TC)n Simple_repeat Simple_repeat 1 33 0 2209 116 0 0 chr4 8006985 8007270 -194321077 + AluSq SINE Alu 1 285 -28 342 45 0 0 chr4 8007270 8007314 -194321033 + (CA)n Simple_repeat Simple_repeat 2 45 0 219 88 0 0 chr4 8007436 8007470 -194320877 + (TG)n Simple_repeat Simple_repeat 2 35 0 409 267 0 19 chr4 8007735 8007840 -194320507 + MIR SINE MIR 64 166 -96 2186 182 35 7 chr4 8007935 8008392 -194319955 - L1MB3 LINE L1 0 6183 5714 183 305 21 53 chr4 8009009 8009104 -194319243 - L2 LINE L2 -485 2829 2738 321 241 36 0 chr4 8009491 8009574 -194318773 + MIR3 SINE MIR 81 166 -42 549 203 206 103 chr4 8009725 8010006 -194318341 + MLT1G LTR MaLR 220 524 -66 637 118 16 53 chr4 8010786 8010973 -194317374 + (CA)n Simple_repeat Simple_repeat 1 180 0 325 189 20 40 chr4 8011023 8011379 -194316968 + (CA)n Simple_repeat Simple_repeat 1 348 0 1383 55 0 6 chr4 8011565 8011730 -194316617 - AluY SINE Alu -147 164 1 2258 113 19 10 chr4 8011917 8012226 -194316121 - AluSx SINE Alu 0 312 1 724 149 14 61 chr4 8012835 8012983 -194315364 - FLAM_C SINE Alu -1 142 2 216 234 21 0 chr4 8013676 8013723 -194314624 + L2 LINE L2 3223 3270 -2 2009 128 59 6 chr4 8013793 8014113 -194314234 + MER1B DNA MER1_type 1 337 0 23 0 0 0 chr4 8014565 8014588 -194313759 + AT_rich Low_complexity Low_complexity 1 23 0 1897 170 39 0 chr4 8015833 8016163 -194312184 - MER2 DNA MER2_type 0 344 2 198 333 15 0 chr4 8016230 8016296 -194312051 - MIR SINE MIR -1 261 195 537 273 133 60 chr4 8016442 8016827 -194311520 - L2 LINE L2 -484 2830 2418 2039 128 21 0 chr4 8016830 8017120 -194311227 + AluSx SINE Alu 1 296 -16 1014 125 79 0 chr4 8017120 8017272 -194311075 + AluSg/x SINE Alu 134 297 -15 221 306 116 41 chr4 8017274 8017421 -194310926 - L2 LINE L2 -893 2421 2264 235 274 84 22 chr4 8017922 8018148 -194310199 - L1ME2 LINE L1 -217 5947 5708 2408 64 7 13 chr4 8018160 8018458 -194309889 - AluSc SINE Alu -13 296 1 1588 184 9 35 chr4 8018918 8019233 -194309114 + AluJb SINE Alu 3 309 -3 292 225 28 14 chr4 8019309 8019380 -194308967 - MIR SINE MIR -111 151 80 552 236 205 0 chr4 8020120 8020315 -194308032 - MLT1H1 LTR MaLR -13 542 308 265 266 21 43 chr4 8020500 8020594 -194307753 + HAL1 LINE L1 450 541 -1966 678 242 42 9 chr4 8020681 8020896 -194307451 + HAL1 LINE L1 1016 1237 -1270 274 316 64 22 chr4 8020906 8021035 -194307312 - MIR SINE MIR -67 141 24 193 350 162 5 chr4 8021678 8021875 -194306472 - MIR SINE MIR -7 255 28 612 284 34 59 chr4 8022423 8022662 -194305685 - MIR SINE MIR -14 248 16 35 41 0 0 chr4 8022723 8022772 -194305575 + AT_rich Low_complexity Low_complexity 1 49 0 1770 94 51 0 chr4 8022817 8023052 -194305295 + AluSq SINE Alu 1 247 -66 856 160 96 0 chr4 8023569 8023725 -194304622 + AluJb SINE Alu 121 291 -21 1032 185 0 14 chr4 8023852 8024063 -194304284 - MER96B DNA MER1_type? -206 211 4 316 262 43 64 chr4 8025362 8025519 -194302828 + L1MC4a LINE L1 5703 5857 -1951 2220 114 0 7 chr4 8025519 8025817 -194302530 + AluSq SINE Alu 1 296 -17 316 262 43 64 chr4 8025817 8025846 -194302501 + L1MC4a LINE L1 5857 5885 -1923 2003 133 3 14 chr4 8026869 8027162 -194301185 + AluJo SINE Alu 1 290 -22 2127 123 0 13 chr4 8027162 8027462 -194300885 - AluSx SINE Alu -16 296 1 405 316 70 29 chr4 8027467 8027711 -194300636 - HERV16 LTR ERVL -3456 1540 1287 529 183 0 11 chr4 8028004 8028097 -194300250 - MLT1I LTR MaLR -317 92 1 1918 136 0 4 chr4 8028150 8028422 -194299925 + AluSx SINE Alu 22 292 -20 241 307 40 10 chr4 8028600 8028701 -194299646 + L1MC/D LINE L1 5475 5578 -766 365 308 119 30 chr4 8028712 8029086 -194299261 - LTR16A LTR ERVL -28 436 13 222 341 47 0 chr4 8029188 8029273 -194299074 + L2 LINE L2 3180 3268 -4 416 259 40 26 chr4 8029308 8029559 -194298788 + L2 LINE L2 2580 2944 -328 318 200 0 29 chr4 8029573 8029643 -194298704 - L2 LINE L2 -241 3072 3005 1095 184 16 5 chr4 8030013 8030203 -194298144 + AluJb SINE Alu 43 234 -78 1617 145 0 50 chr4 8030272 8030554 -194297793 + AluJo SINE Alu 31 298 -14 2423 96 0 0 chr4 8030566 8030867 -194297480 + AluSq SINE Alu 1 301 -12 1119 186 29 0 chr4 8030876 8031080 -194297267 + MLT1A1 LTR MaLR 156 365 0 263 206 82 27 chr4 8031080 8031144 -194297203 + MLT1F1 LTR MaLR 496 563 -4 1532 216 26 31 chr4 8031165 8031398 -194296949 - L1ME LINE L1 -384 5778 5546 868 228 60 85 chr4 8031398 8031798 -194296549 + MLT1B LTR MaLR 1 390 0 1532 216 26 31 chr4 8031798 8031985 -194296362 - L1ME LINE L1 -616 5546 5360 201 339 0 0 chr4 8032210 8032272 -194296075 + MIR SINE MIR 92 153 -55 351 157 0 96 chr4 8032419 8032617 -194295730 + (CAGCC)n Simple_repeat Simple_repeat 2 180 0 384 171 0 67 chr4 8032645 8032838 -194295509 + (CAGCC)n Simple_repeat Simple_repeat 1 180 0 443 141 0 70 chr4 8032883 8033068 -194295279 + (CAGCC)n Simple_repeat Simple_repeat 2 173 0 387 162 0 70 chr4 8033099 8033284 -194295063 + (CAGCC)n Simple_repeat Simple_repeat 2 173 0 830 241 138 20 chr4 8033856 8034284 -194294063 - MLT1C LTR MaLR -17 609 11 804 241 97 0 chr4 8035522 8035759 -194292588 - MLT1B LTR MaLR 0 390 131 371 301 114 5 chr4 8036583 8036802 -194291545 - Charlie8 DNA MER1_type -2174 243 1 317 299 146 18 chr4 8036901 8037065 -194291282 + L2 LINE L2 2876 3060 -253 223 320 64 0 chr4 8037135 8037213 -194291134 + L2 LINE L2 3226 3308 -5 2050 133 3 13 chr4 8037214 8037515 -194290832 + AluJb SINE Alu 1 298 -14 1233 67 0 0 chr4 8038152 8038317 -194290030 + L1PA2 LINE L1 5991 6155 0 2000 169 54 12 chr4 8038346 8038753 -194289594 - MSTB LTR MaLR -2 424 1 379 351 20 0 chr4 8040235 8040383 -194287964 - MIR3 SINE MIR -28 180 30 295 266 85 11 chr4 8041601 8041695 -194286652 + L2 LINE L2 3206 3306 -7 216 306 109 34 chr4 8041705 8041852 -194286495 + MIR SINE MIR 89 246 -16 180 296 0 0 chr4 8042038 8042082 -194286265 + MIR3 SINE MIR 162 205 -3 557 238 0 0 chr4 8042177 8042303 -194286044 + FLAM_A SINE Alu 1 126 -7 2336 64 0 30 chr4 8044448 8044744 -194283603 + AluY SINE Alu 21 307 -4 210 333 0 14 chr4 8044875 8044944 -194283403 + MIR SINE MIR 79 146 -62 674 168 0 0 chr4 8045435 8045554 -194282793 - FLAM_A SINE Alu 0 142 24 469 272 159 20 chr4 8046181 8046376 -194281971 - L3 LINE CR1 -123 1454 1233 278 329 74 27 chr4 8048147 8048296 -194280051 + MIR3 SINE MIR 4 159 -49 3252 249 69 79 chr4 8049325 8050306 -194278041 - L1MD3 LINE L1 -1 8041 7051 2180 116 7 7 chr4 8050306 8050599 -194277748 - AluSx SINE Alu -19 293 1 2512 66 3 7 chr4 8050604 8050909 -194277438 - AluY SINE Alu -7 304 1 3252 249 69 79 chr4 8050909 8051376 -194276971 - L1MD3 LINE L1 -995 7047 6614 2423 62 3 3 chr4 8051674 8051963 -194276384 + AluY SINE Alu 23 311 0 2213 120 0 13 chr4 8052551 8052859 -194275488 + AluJo SINE Alu 1 304 -8 860 190 118 10 chr4 8053895 8054090 -194274257 - MER58A DNA MER1_type -8 216 1 21 57 0 0 chr4 8054180 8054215 -194274132 + AT_rich Low_complexity Low_complexity 1 35 0 1790 244 69 41 chr4 8054290 8055417 -194272930 + Charlie1a DNA MER1_type 1 1206 -249 1725 155 34 30 chr4 8055506 8055802 -194272545 - AluJb SINE Alu -2 310 14 271 360 55 24 chr4 8055862 8056026 -194272321 + MIR3 SINE MIR 25 193 -15 22 0 0 0 chr4 8057019 8057041 -194271306 + AT_rich Low_complexity Low_complexity 1 22 0 229 275 66 0 chr4 8058243 8058334 -194270013 + MIR3 SINE MIR 109 205 -3 1380 223 62 13 chr4 8059931 8060316 -194268031 - MER21B LTR ERV1 -168 695 292 324 158 12 98 chr4 8060376 8060458 -194267889 - MER21B LTR ERV1 -788 75 1 183 171 0 0 chr4 8060560 8060595 -194267752 + L2 LINE L2 3276 3310 -3 290 254 45 0 chr4 8060614 8060681 -194267666 - MER58A DNA MER1_type 0 224 155 234 176 39 0 chr4 8060713 8060764 -194267583 - MER58A DNA MER1_type -28 79 27 1690 205 3 3 chr4 8061529 8061827 -194266520 - AluJb SINE Alu -14 298 1 196 299 13 13 chr4 8062280 8062357 -194265990 - L2 LINE L2 -2 3270 3194 2339 102 0 0 chr4 8064042 8064335 -194264012 + AluSx SINE Alu 1 293 -19 659 183 9 0 chr4 8066835 8066950 -194261397 - FLAM_A SINE Alu -17 116 1 362 296 117 15 chr4 8067648 8067844 -194260503 - MIR SINE MIR -12 250 35 408 309 26 7 chr4 8069254 8069406 -194258941 - MIR SINE MIR -74 188 34 243 146 0 0 chr4 8071066 8071107 -194257240 + (CA)n Simple_repeat Simple_repeat 2 42 0 194 341 80 22 chr4 8071114 8071252 -194257095 - MIR SINE MIR -110 152 7 696 269 90 5 chr4 8071608 8071820 -194256527 - MIR SINE MIR -6 256 27 308 308 13 0 chr4 8071852 8071930 -194256417 - L2 LINE L2 0 3313 3235 1229 176 15 0 chr4 8072334 8072539 -194255808 - AluJb SINE Alu -21 291 84 182 376 82 0 chr4 8074995 8075080 -194253267 - L2 LINE L2 -18 3295 3204 191 280 160 0 chr4 8075807 8075882 -194252465 + MIR SINE MIR 97 183 -79 223 273 38 15 chr4 8076018 8076150 -194252197 + (TA)n Simple_repeat Simple_repeat 2 136 0 407 219 12 0 chr4 8076161 8076243 -194252104 - FLAM_A SINE Alu -59 83 1 423 294 128 11 chr4 8076257 8076437 -194251910 - L2 LINE L2 -31 3282 3082 192 328 102 55 chr4 8076813 8077264 -194251083 + L2 LINE L2 1614 2085 -1229 280 283 78 56 chr4 8078831 8079011 -194249336 + MIR3 SINE MIR 18 201 -7 1719 163 24 7 chr4 8079395 8079684 -194248663 - AluJb SINE Alu -18 294 1 223 251 194 52 chr4 8081573 8081776 -194246571 - MIR SINE MIR -35 227 1 1755 132 7 15 chr4 8082376 8082649 -194245698 - AluJo SINE Alu -28 284 14 198 298 125 39 chr4 8082649 8082753 -194245594 + MIR SINE MIR 113 225 -37 940 149 0 0 chr4 8082894 8083042 -194245305 - L1MB3 LINE L1 0 6183 6036 755 151 0 43 chr4 8083084 8083223 -194245124 - FLAM_C SINE Alu -10 133 1 1174 240 50 8 chr4 8083224 8083583 -194244764 - L1MB3 LINE L1 -218 5965 5592 22 0 0 0 chr4 8084441 8084463 -194243884 + AT_rich Low_complexity Low_complexity 1 22 0 351 296 106 8 chr4 8088983 8089115 -194239232 - L2 LINE L2 -3 3269 3125 1362 238 57 59 chr4 8090010 8090539 -194237808 + MER74A LTR ERVL 30 557 -1 243 240 0 0 chr4 8091536 8091586 -194236761 - L2 LINE L2 0 3272 3223 2680 93 8 3 chr4 8093245 8093598 -194234749 - THE1A LTR MaLR 0 355 1 212 289 0 0 chr4 8094001 8094053 -194234294 - MIR SINE MIR -22 240 189 2208 68 10 0 chr4 8094075 8094367 -194233980 - AluSq SINE Alu -18 295 1 1782 318 73 44 chr4 8094857 8095689 -194232658 + ERVL LTR ERVL 1529 2412 -3352 2263 115 144 3 chr4 8095689 8096064 -194232283 + MSTA LTR MaLR 1 428 0 1782 318 73 44 chr4 8096064 8096500 -194231847 + ERVL LTR ERVL 2412 2834 -2930 232 270 58 44 chr4 8097488 8097625 -194230722 - HAL1b LINE L1 -895 453 315 2412 47 3 10 chr4 8097864 8098163 -194230184 - AluY SINE Alu -14 297 1 960 286 92 65 chr4 8099184 8099891 -194228456 + L2 LINE L2 1140 1865 -1449 433 340 20 40 chr4 8100032 8100282 -194228065 + L2 LINE L2 2245 2489 -825 1230 264 89 12 chr4 8101521 8102014 -194226333 - MER90 LTR ERV1 0 614 84 184 311 27 0 chr4 8103468 8103542 -194224805 + L2 LINE L2 3200 3275 -38 408 88 0 0 chr4 8103630 8103687 -194224660 + (TG)n Simple_repeat Simple_repeat 1 57 0 216 0 0 0 chr4 8104081 8104105 -194224242 + (TC)n Simple_repeat Simple_repeat 2 25 0 353 240 156 7 chr4 8106090 8106244 -194222103 + MIR3 SINE MIR 17 193 -15 218 204 0 0 chr4 8107874 8107918 -194220429 + MIR SINE MIR 104 147 -61 346 339 119 0 chr4 8108295 8108472 -194219875 + MIR SINE MIR 51 248 -14 182 323 0 16 chr4 8108706 8108768 -194219579 + MIR SINE MIR 93 153 -109 254 254 74 96 chr4 8108983 8109184 -194219163 + MIR SINE MIR 19 227 -35 182 253 39 54 chr4 8109215 8109323 -194219024 + MIR SINE MIR 50 144 -64 647 251 165 56 chr4 8109358 8109789 -194218558 + MLT1G3 LTR MaLR 92 539 -3 195 235 226 17 chr4 8110574 8110689 -194217658 + L2 LINE L2 3014 3152 -120 209 326 12 0 chr4 8111005 8111072 -194217275 - MIR SINE MIR -63 145 74 211 307 13 0 chr4 8111533 8111608 -194216739 + MIR SINE MIR 10 85 -177 205 383 145 9 chr4 8111620 8111834 -194216513 - L2 LINE L2 -812 2502 2260 277 360 9 9 chr4 8111846 8111957 -194216390 + L2 LINE L2 2966 3076 -196 414 230 20 1 chr4 8112689 8112801 -194215546 + MIR SINE MIR 33 145 -63 248 298 20 57 chr4 8114516 8114638 -194213709 + MIR SINE MIR 35 150 -70 210 345 109 24 chr4 8114673 8114838 -194213509 - L2 LINE L2 -64 3208 3030 4449 188 21 40 chr4 8115178 8116395 -194211952 - L1M2 LINE L1 -744 5402 4315 2817 191 69 1 chr4 8116601 8117257 -194211090 - L1MB7 LINE L1 -41 6143 5444 261 278 41 10 chr4 8117418 8117515 -194210832 + MLT1J1 LTR MaLR 44 143 -303 182 359 98 0 chr4 8119564 8119656 -194208691 + L2 LINE L2 3138 3238 -34 231 180 20 40 chr4 8119700 8119750 -194208597 + MIR SINE MIR 104 152 -56 333 197 82 0 chr4 8120344 8120434 -194207913 - MIR SINE MIR -64 144 64 1501 127 5 9 chr4 8120885 8121128 -194207219 - AluSg SINE Alu 0 303 62 248 318 37 17 chr4 8121426 8121557 -194206790 - MIR3 SINE MIR -74 134 15 218 350 21 43 chr4 8121732 8121872 -194206475 + L2 LINE L2 2725 2861 -453 239 293 0 0 chr4 8122397 8122455 -194205892 + (CACCAT)n Simple_repeat Simple_repeat 5 62 0 * 954 174 2 5 chr4 8122426 8123375 -194204972 + (CCA)n Simple_repeat Simple_repeat 1 946 0 252 86 0 0 chr4 8123847 8123882 -194204465 + (CTCA)n Simple_repeat Simple_repeat 1 35 0 213 213 0 0 chr4 8124498 8124545 -194203802 + CT-rich Low_complexity Low_complexity 3 49 0 884 188 152 25 chr4 8124725 8125001 -194203346 + MLT1C LTR MaLR 17 327 -140 188 182 0 0 chr4 8125082 8125115 -194203232 - MIR SINE MIR -113 149 117 238 284 82 8 chr4 8125417 8125551 -194202796 - L1ME4a LINE L1 0 6121 5978 3165 234 71 40 chr4 8125583 8126003 -194202344 - L1MD1 LINE L1 -5 6237 5831 2020 132 0 3 chr4 8126003 8126299 -194202048 - AluSx SINE Alu -17 295 1 3165 234 71 40 chr4 8126299 8127257 -194201090 - L1MD1 LINE L1 -411 5831 4813 228 122 0 0 chr4 8127410 8127451 -194200896 + (TG)n Simple_repeat Simple_repeat 2 42 0 393 285 54 8 chr4 8127985 8128155 -194200192 + MIR3 SINE MIR 37 210 -46 343 244 62 31 chr4 8128547 8128740 -194199607 + L1ME4a LINE L1 5922 6120 -1 239 156 39 0 chr4 8129632 8129689 -194198658 - MIR SINE MIR -62 146 99 229 327 52 59 chr4 8129821 8129974 -194198373 + MIR3 SINE MIR 12 163 -45 281 293 213 32 chr4 8129990 8130338 -194198009 - L2 LINE L2 -3 3269 2859 845 196 17 7 chr4 8130747 8131170 -194197177 + (TGGA)n Simple_repeat Simple_repeat 1 427 0 365 306 106 6 chr4 8131539 8131699 -194196648 - L2 LINE L2 -103 3169 2994 688 206 265 5 chr4 8132878 8133097 -194195250 + MLT1F1 LTR MaLR 7 282 -285 243 241 17 0 chr4 8133343 8133401 -194194946 - MIR SINE MIR -63 145 87 950 177 89 7 chr4 8133694 8134062 -194194285 + MER31A LTR ERV1 27 478 -7 523 273 40 48 chr4 8134136 8134385 -194193962 + MER46C DNA MER2_type 90 336 -2 453 149 0 0 chr4 8135693 8135767 -194192580 - MIR SINE MIR -118 144 71 240 217 83 75 chr4 8137140 8137260 -194191087 - MIR SINE MIR -117 145 25 272 278 52 61 chr4 8139712 8139827 -194188520 - L2 LINE L2 0 3313 3200 354 344 33 0 chr4 8140192 8140314 -194188033 + L2 LINE L2 3182 3307 -6 217 339 0 0 chr4 8140433 8140495 -194187852 + MIR SINE MIR 92 153 -55 369 174 0 65 chr4 8140630 8140910 -194187437 + (CAGCC)n Simple_repeat Simple_repeat 1 261 0 433 150 0 70 chr4 8141009 8141196 -194187151 + (CAGCC)n Simple_repeat Simple_repeat 2 175 0 362 168 0 70 chr4 8141268 8141453 -194186894 + (CAGCC)n Simple_repeat Simple_repeat 2 173 0 835 255 115 23 chr4 8142052 8142463 -194185884 - MLT1C LTR MaLR -17 488 40 197 181 28 56 chr4 8143832 8143904 -194184443 + L2 LINE L2 3027 3096 -176 434 275 186 36 chr4 8144569 8144816 -194183531 + L2 LINE L2 2989 3272 0 316 232 24 0 chr4 8144981 8145063 -194183284 - MIR SINE MIR -118 144 61 202 309 82 0 chr4 8145877 8145987 -194182360 + L2 LINE L2 2735 2853 -461 413 160 8 50 chr4 8146181 8146300 -194182047 + CT-rich Low_complexity Low_complexity 2 115 0 339 200 88 0 chr4 8146504 8146584 -194181763 - MIR SINE MIR -110 152 66 195 238 79 16 chr4 8146844 8146907 -194181440 + L3 LINE CR1 968 1034 -543 192 300 0 33 chr4 8147622 8147682 -194180665 + L3 LINE CR1 1410 1467 -110 264 260 55 0 chr4 8150927 8151000 -194177347 - MIR3 SINE MIR -17 191 115 1221 96 0 0 chr4 8151466 8151677 -194176670 + (TCCA)n Simple_repeat Simple_repeat 1 211 0 1386 56 0 0 chr4 8151697 8151877 -194176470 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 1080 124 0 0 chr4 8152097 8152275 -194176072 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 307 371 111 22 chr4 8152354 8152715 -194175632 - L2 LINE L2 -3 3269 2877 201 278 19 0 chr4 8152724 8152778 -194175569 + L2 LINE L2 3217 3271 -1 299 226 66 47 chr4 8153070 8153176 -194175171 - MIR3 SINE MIR 0 208 101 212 341 171 43 chr4 8154642 8154941 -194173406 + L2 LINE L2 2913 3249 -23 332 262 58 9 chr4 8155010 8155120 -194173227 - MIR3 SINE MIR -53 155 58 228 317 37 0 chr4 8156170 8156252 -194172095 - L2 LINE L2 0 3272 3188 776 145 36 16 chr4 8156739 8157047 -194171300 + (TCCA)n Simple_repeat Simple_repeat 1 314 0 535 156 50 0 chr4 8157067 8157227 -194171120 + (TCCA)n Simple_repeat Simple_repeat 3 170 0 715 164 29 0 chr4 8157252 8157423 -194170924 + (TCCA)n Simple_repeat Simple_repeat 3 178 0 606 158 40 0 chr4 8157448 8157680 -194170667 + (TCCA)n Simple_repeat Simple_repeat 1 241 0 348 314 42 0 chr4 8158837 8158955 -194169392 + MIR SINE MIR 50 172 -90 234 261 0 0 chr4 8159164 8159210 -194169137 + MIR SINE MIR 111 156 -106 938 214 45 15 chr4 8159504 8159770 -194168577 + L1MB7 LINE L1 5902 6175 -9 341 242 87 27 chr4 8161453 8161602 -194166745 + L1ME4a LINE L1 5952 6109 -12 2233 104 7 0 chr4 8161792 8162091 -194166256 - AluSx SINE Alu -11 301 1 359 297 27 18 chr4 8162708 8162819 -194165528 + L2 LINE L2 3201 3312 -1 270 279 0 0 chr4 8162819 8162880 -194165467 - MIR SINE MIR -92 170 110 243 358 8 8 chr4 8162965 8163085 -194165262 - L2 LINE L2 -220 3052 2933 230 359 127 0 chr4 8163124 8163266 -194165081 - MIR SINE MIR -26 236 77 221 282 18 3 chr4 8163711 8163779 -194164568 + MIR SINE MIR 21 89 -119 404 288 103 32 chr4 8163871 8164152 -194164195 + MLT1H LTR MaLR 147 447 -102 378 209 180 57 chr4 8164158 8164369 -194163978 + MLT1H LTR MaLR 299 535 -14 201 224 41 0 chr4 8165611 8165660 -194162687 - MIR SINE MIR -134 128 78 251 193 96 36 chr4 8165675 8165758 -194162589 - MIR SINE MIR -1 261 174 1788 212 37 33 chr4 8165818 8166309 -194162038 - MLT1D LTR MaLR -1 504 12 530 241 60 79 chr4 8166320 8166585 -194161762 - MLT1D-int LTR MaLR 0 1371 1112 655 251 184 43 chr4 8167726 8168145 -194160202 - MLT1D LTR MaLR -25 480 3 693 298 48 4 chr4 8168483 8168711 -194159636 - MIR SINE MIR -19 243 6 453 244 17 9 chr4 8168961 8169076 -194159271 - MIR SINE MIR -141 121 6 287 304 35 17 chr4 8169981 8170096 -194158251 + MIR SINE MIR 22 138 -70 195 214 0 0 chr4 8170393 8170463 -194157884 + GA-rich Low_complexity Low_complexity 2 71 0 504 196 0 30 chr4 8170517 8170685 -194157662 + GA-rich Low_complexity Low_complexity 1 163 0 227 243 0 27 chr4 8170739 8170850 -194157497 + GA-rich Low_complexity Low_complexity 1 108 0 667 175 267 0 chr4 8170926 8171143 -194157204 + MER58 DNA MER1_type 2146 2420 0 227 255 0 0 chr4 8171163 8171214 -194157133 + G-rich Low_complexity Low_complexity 4 54 0 450 219 21 20 chr4 8171540 8171671 -194156676 + MIR SINE MIR 33 165 -43 191 323 16 0 chr4 8171863 8171925 -194156422 - L2 LINE L2 -2 3311 3249 2425 59 20 3 chr4 8172878 8173184 -194155163 - AluY SINE Alu 0 311 1 553 345 93 13 chr4 8173935 8174323 -194154024 - L1ME4a LINE L1 -225 5896 5478 474 320 10 10 chr4 8174590 8174784 -194153563 - MLT1J LTR MaLR -295 216 23 6141 180 50 43 chr4 8175082 8175240 -194153107 - L1M4c LINE L1 -4787 1597 1442 2173 117 3 0 chr4 8175240 8175540 -194152807 + AluSx SINE Alu 2 302 -10 6141 180 50 43 chr4 8175540 8176967 -194151380 - L1M4c LINE L1 -4942 1442 1 300 422 12 12 chr4 8177144 8177305 -194151042 + L1ME4a LINE L1 5324 5484 -637 305 307 93 29 chr4 8177375 8177655 -194150692 + L1ME4a LINE L1 5594 5891 -230 264 349 28 94 chr4 8179000 8179435 -194148912 + L2 LINE L2 2907 3312 -1 331 330 19 0 chr4 8179543 8179646 -194148701 + MIR SINE MIR 47 151 -111 310 313 0 0 chr4 8179761 8179841 -194148506 - L2 LINE L2 -23 3290 3211 1261 246 62 42 chr4 8181138 8181635 -194146712 + MER90 LTR ERV1 108 614 0 360 274 75 52 chr4 8181878 8182130 -194146217 - L2 LINE L2 -173 3099 2842 464 371 125 0 chr4 8182307 8182587 -194145760 + L3 LINE CR1 1230 1544 -33 321 89 0 0 chr4 8183728 8183773 -194144574 + (TCC)n Simple_repeat Simple_repeat 3 47 0 1071 102 17 0 chr4 8184131 8184308 -194144039 + (CTCA)n Simple_repeat Simple_repeat 1 180 0 981 144 0 0 chr4 8184308 8184338 -194144009 + (CTCA)n Simple_repeat Simple_repeat 1 204 0 981 144 0 0 chr4 8184338 8184512 -194143835 + (CTCA)n Simple_repeat Simple_repeat 4 177 0 395 277 31 15 chr4 8184651 8184781 -194143566 + MER63A DNA MER1_type 53 184 -26 182 61 0 30 chr4 8185233 8185266 -194143081 + (TGGGGG)n Simple_repeat Simple_repeat 4 35 0 391 288 22 66 chr4 8186342 8186543 -194141804 - MIR3 SINE MIR -56 206 15 272 345 37 15 chr4 8186734 8186903 -194141444 - MIR SINE MIR -68 140 3 368 286 119 24 chr4 8187361 8187571 -194140776 - MIR SINE MIR -2 260 31 204 40 0 0 chr4 8188180 8188205 -194140142 + (T)n Simple_repeat Simple_repeat 1 25 0 1038 152 1 6 chr4 8189134 8189936 -194138411 + (CTCA)n Simple_repeat Simple_repeat 1 797 0 298 183 33 0 chr4 8189936 8189996 -194138351 + (TTCA)n Simple_repeat Simple_repeat 3 64 0 574 214 6 16 chr4 8189998 8190180 -194138167 + (CTCA)n Simple_repeat Simple_repeat 1 180 0 349 275 28 0 chr4 8192003 8192112 -194136235 + MER45C DNA AcHobo 83 194 -759 225 0 0 0 chr4 8192254 8192279 -194136068 + (TG)n Simple_repeat Simple_repeat 2 26 0 647 255 165 48 chr4 8193815 8193939 -194134408 + MER45C DNA AcHobo 1 109 -844 2228 89 3 0 chr4 8193939 8194231 -194134116 + AluSp SINE Alu 1 293 -20 647 255 165 48 chr4 8194231 8194482 -194133865 + MER45C DNA AcHobo 109 420 -533 347 237 0 3 chr4 8194488 8194646 -194133701 + MER45C DNA AcHobo 756 953 0 1776 191 70 5 chr4 8195564 8195963 -194132384 + LTR32 LTR ERVL 47 471 0 492 32 0 0 chr4 8196704 8196766 -194131581 + (GGCTG)n Simple_repeat Simple_repeat 4 65 0 242 225 144 9 chr4 8196766 8196877 -194131470 + MIR SINE MIR 19 144 -64 187 303 97 28 chr4 8196976 8197121 -194131226 + MIR SINE MIR 87 241 -21 248 365 21 0 chr4 8197207 8197303 -194131044 - MIR SINE MIR -80 182 85 224 267 134 62 chr4 8198089 8198378 -194129969 + L2 LINE L2 2771 3084 -188 361 218 129 0 chr4 8198897 8198998 -194129349 + L2 LINE L2 3184 3297 -16 240 35 0 0 chr4 8199264 8199293 -194129054 + (TCC)n Simple_repeat Simple_repeat 2 30 0 270 221 63 32 chr4 8200324 8200419 -194127928 + L2 LINE L2 2917 3014 -258 805 194 70 0 chr4 8200637 8200823 -194127524 - MLT1B LTR MaLR 0 390 192 773 153 0 8 chr4 8200827 8200951 -194127396 - FRAM SINE Alu -5 171 49 859 148 77 0 chr4 8200984 8201153 -194127194 - MLT1B LTR MaLR -201 189 8 476 274 0 0 chr4 8201466 8201590 -194126757 - MER58B DNA MER1_type 0 341 218 299 278 216 0 chr4 8201740 8201837 -194126510 + L2 LINE L2 3182 3299 -14 207 88 0 0 chr4 8201966 8202000 -194126347 + (CA)n Simple_repeat Simple_repeat 1 34 0 376 250 58 17 chr4 8202002 8202122 -194126225 - MIR SINE MIR -58 204 80 261 279 70 0 chr4 8203867 8203953 -194124394 + L2 LINE L2 2993 3084 -188 250 217 12 24 chr4 8204500 8204583 -194123764 + MLT1H LTR MaLR 111 192 -357 1113 100 13 20 chr4 8205426 8205784 -194122563 + (TCCA)n Simple_repeat Simple_repeat 1 537 0 234 231 0 31 chr4 8205820 8205885 -194122462 - L2 LINE L2 -53 3219 3157 1887 132 66 44 chr4 8205945 8206310 -194122037 + THE1C LTR MaLR 1 373 -2 303 308 154 0 chr4 8206501 8206696 -194121651 + LTR33 LTR ERVL 50 274 -247 481 268 39 22 chr4 8206753 8206932 -194121415 + MLT1D LTR MaLR 16 197 -308 474 228 0 0 chr4 8206938 8207176 -194121171 + (CA)n Simple_repeat Simple_repeat 1 238 0 347 247 6 0 chr4 8207195 8207353 -194120994 + (CA)n Simple_repeat Simple_repeat 1 159 0 198 241 0 0 chr4 8207406 8207493 -194120854 + (CA)n Simple_repeat Simple_repeat 1 87 0 360 244 0 0 chr4 8207554 8207734 -194120613 + (CA)n Simple_repeat Simple_repeat 1 180 0 432 233 0 0 chr4 8207769 8207941 -194120406 + (CA)n Simple_repeat Simple_repeat 2 173 0 234 248 0 0 chr4 8207959 8208068 -194120279 + (CA)n Simple_repeat Simple_repeat 1 109 0 596 271 81 9 chr4 8208114 8208335 -194120012 + MLT1D LTR MaLR 261 497 -8 318 98 0 0 chr4 8209734 8209785 -194118562 + (TTCA)n Simple_repeat Simple_repeat 4 54 0 251 366 58 31 chr4 8209882 8210106 -194118241 - L2 LINE L2 0 3313 3084 1096 262 77 25 chr4 8210262 8210701 -194117646 + MLT1C LTR MaLR 6 467 0 312 127 0 0 chr4 8211064 8211119 -194117228 + (TTCA)n Simple_repeat Simple_repeat 2 56 0 195 209 47 0 chr4 8211259 8211302 -194117045 - MIR SINE MIR -204 58 14 335 136 0 45 chr4 8212077 8212143 -194116204 - L1MD3 LINE L1 -13 7982 7920 263 263 222 0 chr4 8212149 8212248 -194116099 - MIR SINE MIR -128 134 14 2393 260 92 4 chr4 8212298 8213076 -194115271 - L1MC3 LINE L1 -70 7715 6869 2084 112 10 0 chr4 8213093 8213389 -194114958 - AluSx SINE Alu -13 299 1 365 263 29 36 chr4 8214010 8214147 -194114200 - L2 LINE L2 -216 3056 2921 275 286 95 24 chr4 8214490 8214616 -194113731 + L2 LINE L2 2959 3093 -179 299 316 73 7 chr4 8215328 8215464 -194112883 - MIR SINE MIR -37 225 81 210 118 0 0 chr4 8216415 8216449 -194111898 + (A)n Simple_repeat Simple_repeat 1 34 0 443 374 75 19 chr4 8217387 8217919 -194110428 - L2 LINE L2 -661 2653 2092 32 0 0 0 chr4 8218195 8218227 -194110120 + AT_rich Low_complexity Low_complexity 1 32 0 500 172 35 132 chr4 8218227 8218401 -194109946 - L1MA7 LINE L1 -2 6289 6133 615 231 18 1 chr4 8218585 8218770 -194109577 - L1MB4 LINE L1 0 6180 5992 252 253 120 0 chr4 8218813 8218888 -194109459 + L2 LINE L2 3205 3288 -25 2254 72 10 0 chr4 8218948 8219241 -194109106 - AluY SINE Alu -15 296 1 255 31 0 0 chr4 8219268 8219300 -194109047 + (TTCTG)n Simple_repeat Simple_repeat 5 36 0 1925 150 3 0 chr4 8220197 8220503 -194107844 + AluJb SINE Alu 1 307 -5 344 313 62 58 chr4 8220604 8220812 -194107535 - L2 LINE L2 -1 3312 3104 328 294 32 97 chr4 8220812 8221091 -194107256 + L1ME4a LINE L1 5838 6098 -23 1731 141 0 28 chr4 8221297 8221625 -194106722 - AluJo SINE Alu 0 320 1 389 259 6 0 chr4 8221646 8221804 -194106543 + CT-rich Low_complexity Low_complexity 1 159 0 440 345 21 23 chr4 8221988 8222218 -194106129 - MIR SINE MIR -18 244 17 361 271 120 30 chr4 8223371 8223504 -194104843 - MIR SINE MIR -10 252 108 221 295 63 11 chr4 8223630 8223725 -194104622 - L2 LINE L2 -54 3259 3160 200 275 14 0 chr4 8224011 8224080 -194104267 - L2 LINE L2 -1230 2084 2015 253 146 0 0 chr4 8225036 8225077 -194103270 - L3 LINE CR1 -112 1465 1425 873 161 3 0 chr4 8225886 8226179 -194102168 + (CA)n Simple_repeat Simple_repeat 1 294 0 409 292 34 34 chr4 8226894 8227072 -194101275 + LTR16A1 LTR ERVL 62 239 -218 495 89 0 33 chr4 8227396 8227486 -194100861 + (GGA)n Simple_repeat Simple_repeat 3 89 0 446 329 162 22 chr4 8228513 8228612 -194099735 - L2 LINE L2 -26 3287 3203 255 31 0 0 chr4 8228612 8228644 -194099703 + (TG)n Simple_repeat Simple_repeat 2 33 0 446 329 162 22 chr4 8228644 8229515 -194098832 - L2 LINE L2 -110 3203 2174 240 337 30 10 chr4 8229647 8229748 -194098599 - MIR SINE MIR -113 149 47 330 345 61 39 chr4 8229770 8230080 -194098267 + L2 LINE L2 2955 3271 -1 183 80 0 0 chr4 8230102 8230127 -194098220 + (TGGG)n Simple_repeat Simple_repeat 3 27 0 300 235 18 24 chr4 8230181 8230347 -194098000 + (TGGA)n Simple_repeat Simple_repeat 4 168 0 762 146 35 0 chr4 8231011 8231182 -194097165 + (TGGA)n Simple_repeat Simple_repeat 2 178 0 494 160 34 117 chr4 8231411 8231617 -194096730 - MER53 DNA DNA 0 189 1 209 260 40 0 chr4 8232128 8232178 -194096169 - MER91A DNA MER1_type -126 70 19 282 305 48 0 chr4 8232195 8232300 -194096047 + L2 LINE L2 3199 3308 -5 602 203 25 0 chr4 8232304 8232467 -194095880 + (TGGA)n Simple_repeat Simple_repeat 3 169 0 581 165 28 23 chr4 8232519 8232695 -194095652 + (TGGA)n Simple_repeat Simple_repeat 4 180 0 851 133 17 17 chr4 8232740 8232920 -194095427 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 629 134 28 34 chr4 8232958 8233137 -194095210 + (TGGA)n Simple_repeat Simple_repeat 1 178 0 776 163 17 6 chr4 8233177 8233355 -194094992 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 297 132 26 26 chr4 8233367 8233443 -194094904 + (TGGA)n Simple_repeat Simple_repeat 2 77 0 591 189 26 13 chr4 8233486 8233715 -194094632 + (TGGA)n Simple_repeat Simple_repeat 1 232 0 582 239 161 63 chr4 8235583 8235838 -194092509 - MER58B DNA MER1_type 0 341 62 218 267 105 87 chr4 8237843 8238015 -194090332 - L2 LINE L2 -36 3236 3062 195 228 18 18 chr4 8238297 8238354 -194089993 - MIR SINE MIR -136 126 70 231 302 155 9 chr4 8238567 8238683 -194089664 + L2 LINE L2 3124 3256 -16 189 317 173 36 chr4 8238967 8239216 -194089131 - L2 LINE L2 -12 3301 3019 331 248 109 0 chr4 8239293 8239394 -194088953 + LTR16C LTR ERVL 202 313 -178 288 311 0 0 chr4 8239459 8239533 -194088814 + LTR16C LTR ERVL 418 491 0 249 253 154 62 chr4 8239609 8239771 -194088576 + MIR3 SINE MIR 11 187 -21 246 318 94 40 chr4 8239794 8239995 -194088352 + MIR SINE MIR 36 247 -15 229 323 141 0 chr4 8240716 8240815 -194087532 + MLT1J LTR MaLR 40 152 -359 253 271 32 101 chr4 8241814 8242002 -194086345 + L1MEd LINE L1 11 185 -5934 991 301 100 30 chr4 8242040 8242511 -194085836 + MLT1J LTR MaLR 2 505 -6 1935 131 67 62 chr4 8242663 8242883 -194085464 - THE1C LTR MaLR 0 375 151 2136 56 63 0 chr4 8242883 8243167 -194085180 + AluY SINE Alu 1 302 -9 1935 131 67 62 chr4 8243167 8243319 -194085028 - THE1C LTR MaLR -224 151 1 308 144 51 42 chr4 8243388 8243506 -194084841 + (CA)n Simple_repeat Simple_repeat 2 120 0 493 287 105 29 chr4 8243671 8244089 -194084258 + L1MEd LINE L1 621 1070 -5049 9400 57 8 108 chr4 8244273 8245795 -194082552 + SVA Other Other 1 1369 -17 197 33 33 0 chr4 8245799 8245829 -194082518 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1025 170 12 0 chr4 8245841 8246012 -194082335 - AluSg/x SINE Alu -6 306 134 1267 127 24 19 chr4 8246368 8246573 -194081774 + AluSq SINE Alu 68 273 -40 283 298 35 15 chr4 8246574 8246772 -194081575 + L1MEd LINE L1 2227 2428 -3701 381 93 0 0 chr4 8246783 8246837 -194081510 + (TG)n Simple_repeat Simple_repeat 2 55 0 646 142 35 0 chr4 8247156 8247269 -194081078 + MLT1D LTR MaLR 372 488 -17 2007 152 7 0 chr4 8247360 8247670 -194080677 + AluSx SINE Alu 1 312 0 286 194 41 71 chr4 8249155 8249215 -194079132 + MER92B LTR ERV1 157 214 -422 2273 105 0 0 chr4 8249215 8249521 -194078826 + AluSg SINE Alu 1 306 -4 286 194 41 71 chr4 8249521 8249558 -194078789 + MER92B LTR ERV1 214 251 -385 515 255 182 0 chr4 8249573 8249765 -194078582 + MER92B LTR ERV1 358 584 -52 272 211 92 0 chr4 8250346 8250422 -194077925 + MER92B LTR ERV1 546 628 -8 268 303 92 17 chr4 8251566 8251685 -194076662 + L2 LINE L2 3145 3272 0 2540 218 89 48 chr4 8251817 8252525 -194075822 + MER21B LTR ERV1 12 748 -115 263 388 18 24 chr4 8252600 8252770 -194075577 - MIR SINE MIR -82 180 12 287 313 62 23 chr4 8253355 8253483 -194074864 + L2 LINE L2 3139 3271 -1 665 279 32 23 chr4 8254077 8254296 -194074051 + MLT1G1 LTR MaLR 16 236 -359 634 147 0 0 chr4 8254296 8254391 -194073956 - AluJb SINE Alu -11 301 207 260 276 94 47 chr4 8254415 8254542 -194073805 + MLT1G1 LTR MaLR 423 555 0 246 32 0 0 chr4 8254633 8254664 -194073683 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 756 301 77 18 chr4 8254707 8255060 -194073287 - MLT1I LTR MaLR -13 396 13 22 0 0 0 chr4 8255215 8255237 -194073110 + AT_rich Low_complexity Low_complexity 1 22 0 290 266 8 32 chr4 8256218 8256342 -194072005 + GA-rich Low_complexity Low_complexity 1 121 0 719 196 0 0 chr4 8256583 8256716 -194071631 - MLT1D LTR MaLR -5 500 368 253 255 112 20 chr4 8256783 8256881 -194071466 + MIR SINE MIR 44 150 -58 646 246 78 6 chr4 8257601 8257780 -194070567 + MIR SINE MIR 36 227 -35 2272 103 0 0 chr4 8257781 8258091 -194070256 + AluSg SINE Alu 1 310 0 207 366 47 11 chr4 8258380 8258571 -194069776 + L2 LINE L2 2847 3044 -228 620 301 42 5 chr4 8260316 8260532 -194067815 - L3 LINE CR1 -60 1517 1294 3110 97 16 9 chr4 8260722 8261164 -194067183 + L1PA11 LINE L1 5727 6171 -3 325 308 62 82 chr4 8261188 8261396 -194066951 + HAL1 LINE L1 1086 1289 -1218 397 283 154 38 chr4 8261574 8261814 -194066533 + HAL1b LINE L1 452 719 -629 351 336 0 0 chr4 8262936 8263040 -194065307 + MIR3 SINE MIR 84 187 -21 192 303 84 67 chr4 8263298 8263417 -194064930 - L2 LINE L2 -4 3309 3189 257 245 134 28 chr4 8263431 8263601 -194064746 - MIR SINE MIR -57 205 16 2280 137 33 22 chr4 8263662 8264021 -194064326 - THE1B LTR MaLR 0 364 2 219 333 29 36 chr4 8264028 8264166 -194064181 + MIR3 SINE MIR 45 181 -27 217 191 0 21 chr4 8264455 8264502 -194063845 - L2 LINE L2 -5 3308 3263 215 228 0 0 chr4 8264784 8264841 -194063506 + T-rich Low_complexity Low_complexity 1 57 0 574 307 62 8 chr4 8265152 8265393 -194062954 + MIR SINE MIR 1 254 -8 366 291 118 0 chr4 8265411 8265538 -194062809 + L1ME4a LINE L1 5773 5914 -207 448 272 96 92 chr4 8266083 8266322 -194062025 - L1ME LINE L1 -592 5529 5290 448 266 55 0 chr4 8266391 8266519 -194061828 + MIR SINE MIR 74 208 -54 1710 155 13 26 chr4 8266972 8267276 -194061071 - AluSx SINE Alu -8 304 5 209 355 66 13 chr4 8267474 8267626 -194060721 + L2 LINE L2 2907 3066 -206 383 289 90 0 chr4 8267930 8268094 -194060253 + MIR SINE MIR 16 203 -5 25 51 0 0 chr4 8268199 8268238 -194060109 + AT_rich Low_complexity Low_complexity 1 39 0 411 294 18 65 chr4 8268653 8268823 -194059524 - MIR3 SINE MIR -14 194 33 1348 184 139 65 chr4 8269107 8269509 -194058838 - MSTB1 LTR MaLR 0 432 1 181 278 56 14 chr4 8270351 8270423 -194057924 + L2 LINE L2 2671 2745 -569 399 338 61 13 chr4 8270485 8270713 -194057634 + MER102b DNA MER1_type 102 340 -1 217 288 0 0 chr4 8270899 8270958 -194057389 + L2 LINE L2 2985 3043 -229 303 269 120 0 chr4 8271774 8271882 -194056465 + Charlie5 DNA MER1_type 7 127 -2485 * 1489 184 28 46 chr4 8271879 8272270 -194056077 + Charlie5 DNA MER1_type 2234 2617 0 452 174 0 10 chr4 8272824 8272922 -194055425 + CT-rich Low_complexity Low_complexity 1 97 0 262 315 196 4 chr4 8273347 8273607 -194054740 - L2 LINE L2 -137 3176 2867 1145 147 0 0 chr4 8273797 8273974 -194054373 + AluSg/x SINE Alu 136 312 0 307 235 20 20 chr4 8273990 8274092 -194054255 + Charlie7 DNA MER1_type 67 168 -2444 2149 284 86 25 chr4 8274150 8275261 -194053086 + Charlie7 DNA MER1_type 1428 2605 -7 204 100 25 0 chr4 8275873 8275913 -194052434 + L2 LINE L2 3014 3054 -218 196 320 0 13 chr4 8276084 8276162 -194052185 + L2 LINE L2 2909 2985 -287 2150 99 0 17 chr4 8277947 8278249 -194050098 - AluSg SINE Alu -13 297 1 2024 214 55 88 chr4 8278714 8279313 -194049034 + MER119 DNA MER1_type 5 583 0 5306 181 33 9 chr4 8279340 8280391 -194047956 + L1MC3 LINE L1 6708 7783 -2 252 200 92 0 chr4 8280518 8280583 -194047764 + MLT1J1 LTR MaLR 66 136 -310 247 215 92 0 chr4 8280608 8280673 -194047674 + MLT1J1 LTR MaLR 66 136 -310 353 287 25 0 chr4 8280698 8280822 -194047525 + MLT1J2 LTR MaLR 67 194 -215 204 308 25 17 chr4 8281335 8281455 -194046892 + CT-rich Low_complexity Low_complexity 3 123 0 278 202 0 45 chr4 8282271 8282360 -194045987 + (CACCAT)n Simple_repeat Simple_repeat 2 86 0 655 116 0 101 chr4 8282371 8282570 -194045777 + (CACCAT)n Simple_repeat Simple_repeat 1 179 0 655 116 0 101 chr4 8282584 8282783 -194045564 + (CACCAT)n Simple_repeat Simple_repeat 1 179 0 340 97 32 0 chr4 8282795 8282857 -194045490 + (CACCAT)n Simple_repeat Simple_repeat 5 68 0 688 176 23 6 chr4 8282868 8283044 -194045303 + (CACCAT)n Simple_repeat Simple_repeat 1 179 0 208 107 0 0 chr4 8283044 8283072 -194045275 + (CAT)n Simple_repeat Simple_repeat 1 28 0 318 317 137 22 chr4 8283581 8283764 -194044583 - MIR SINE MIR -6 256 53 608 310 70 0 chr4 8283808 8284021 -194044326 + MIR SINE MIR 35 262 0 220 98 0 59 chr4 8285111 8285162 -194043185 + (TTCC)n Simple_repeat Simple_repeat 4 51 0 249 318 163 20 chr4 8285397 8285796 -194042551 + L2 LINE L2 2817 3272 0 599 365 73 0 chr4 8285856 8286212 -194042135 + L3 LINE CR1 767 1148 -429 581 324 14 19 chr4 8286225 8286438 -194041909 + MIR SINE MIR 8 219 -43 2018 137 67 50 chr4 8287653 8287941 -194040406 + THE1B LTR MaLR 1 298 -66 1954 142 0 13 chr4 8287941 8288251 -194040096 + AluSx SINE Alu 6 311 -1 2018 137 67 50 chr4 8288251 8288320 -194040027 + THE1B LTR MaLR 298 364 0 251 175 140 0 chr4 8288380 8288437 -194039910 - MIR SINE MIR -117 145 81 427 176 0 0 chr4 8288861 8288935 -194039412 + MIR SINE MIR 79 152 -110 2908 235 46 51 chr4 8291189 8291228 -194037119 - L1ME1 LINE L1 -3 6163 6125 2031 101 0 29 chr4 8291228 8291544 -194036803 - AluSq SINE Alu -6 307 1 2908 235 46 51 chr4 8291544 8292403 -194035944 - L1ME1 LINE L1 -41 6125 5263 189 0 0 0 chr4 8292403 8292424 -194035923 + (TA)n Simple_repeat Simple_repeat 2 22 0 2218 103 3 13 chr4 8292424 8292736 -194035611 - AluSx SINE Alu -3 309 1 2908 235 46 51 chr4 8292736 8293053 -194035294 - L1ME1 LINE L1 -902 5264 4940 600 14 0 0 chr4 8293053 8293122 -194035225 + (TTTC)n Simple_repeat Simple_repeat 3 71 0 2908 235 46 51 chr4 8293122 8293168 -194035179 - L1ME1 LINE L1 -1226 4940 4895 348 183 175 8 chr4 8294816 8294936 -194033411 + MIR SINE MIR 92 231 -31 343 275 73 28 chr4 8295131 8295212 -194033135 - L1ME4a LINE L1 -1 6120 6044 2259 108 0 0 chr4 8295212 8295519 -194032828 + AluSx SINE Alu 1 307 -5 343 275 73 28 chr4 8295519 8295615 -194032732 - L1ME4a LINE L1 -77 6044 5935 307 305 152 48 chr4 8296008 8296218 -194032129 - L1ME4a LINE L1 -203 5918 5687 2356 111 43 25 chr4 8297234 8297602 -194030745 - THE1C LTR MaLR 0 375 1 236 318 122 0 chr4 8298494 8298601 -194029746 - MIR SINE MIR -80 182 63 313 209 118 18 chr4 8299611 8299721 -194028626 - MER113 DNA MER1_type? -302 219 99 2252 82 7 0 chr4 8299722 8300015 -194028332 + AluSg SINE Alu 6 300 -10 954 203 45 21 chr4 8301761 8302003 -194026344 - ORSL DNA AcHobo -20 255 8 235 364 79 0 chr4 8303126 8303266 -194025081 + MIR SINE MIR 87 237 -25 602 232 3 3 chr4 8304988 8305304 -194023043 + (CA)n Simple_repeat Simple_repeat 1 316 0 503 239 6 0 chr4 8305318 8305485 -194022862 + (CA)n Simple_repeat Simple_repeat 1 168 0 545 247 0 4 chr4 8305499 8305776 -194022571 + (CA)n Simple_repeat Simple_repeat 1 275 0 378 271 0 0 chr4 8305790 8305930 -194022417 + (CA)n Simple_repeat Simple_repeat 1 140 0 560 240 6 0 chr4 8305946 8306125 -194022222 + (CA)n Simple_repeat Simple_repeat 1 180 0 629 234 0 6 chr4 8306139 8306461 -194021886 + (CA)n Simple_repeat Simple_repeat 1 319 0 228 262 0 0 chr4 8306985 8307046 -194021301 - L1MB3 LINE L1 -1 6182 6122 241 311 66 0 chr4 8307884 8308006 -194020341 - L2 LINE L2 0 3272 3143 198 195 0 0 chr4 8309409 8309450 -194018897 - MIR SINE MIR -113 149 109 261 326 47 0 chr4 8310053 8310139 -194018208 + MIR3 SINE MIR 97 186 -22 574 250 8 15 chr4 8310320 8310452 -194017895 - MER45A DNA AcHobo -2 176 46 260 291 64 81 chr4 8311120 8311292 -194017055 + MIR SINE MIR 46 214 -48 577 315 7 0 chr4 8311818 8311964 -194016383 + MIR SINE MIR 8 154 -108 417 328 88 46 chr4 8312605 8312910 -194015437 - L2 LINE L2 -25 3247 2930 187 233 167 0 chr4 8313200 8313260 -194015087 + MIR3 SINE MIR 125 194 -14 207 0 0 0 chr4 8314014 8314037 -194014310 + (TGAA)n Simple_repeat Simple_repeat 4 26 0 316 265 69 0 chr4 8316668 8316770 -194011577 + MIR SINE MIR 117 225 -37 327 302 88 39 chr4 8316888 8317093 -194011254 - L1MB7 LINE L1 -163 6021 5807 226 264 23 93 chr4 8317367 8317496 -194010851 - L1MB7 LINE L1 -672 5449 5330 530 272 92 17 chr4 8318226 8318399 -194009948 - MER5A DNA MER1_type 0 189 4 427 314 31 54 chr4 8318436 8318736 -194009611 + L2 LINE L2 2776 3068 -245 252 0 0 0 chr4 8318802 8318830 -194009517 + (CCA)n Simple_repeat Simple_repeat 3 30 0 1086 160 0 0 chr4 8318944 8319735 -194008612 + (TGGA)n Simple_repeat Simple_repeat 1 791 0 384 321 71 9 chr4 8321052 8321264 -194007083 - L1ME LINE L1 -645 5517 5293 8053 205 55 12 chr4 8322086 8322304 -194006043 - L1PB4 LINE L1 -4 6344 6137 207 0 0 0 chr4 8322304 8322327 -194006020 + (TA)n Simple_repeat Simple_repeat 2 24 0 8053 205 55 12 chr4 8322327 8327528 -194000819 - L1PB4 LINE L1 -211 6137 772 3897 167 14 0 chr4 8327538 8328238 -194000109 - L1PB4 LINE L1 -4618 710 1 241 223 98 89 chr4 8328778 8328890 -193999457 + MIR SINE MIR 105 217 -45 2371 92 0 0 chr4 8329276 8329581 -193998766 - AluSc SINE Alu -4 305 1 369 320 4 17 chr4 8329674 8329871 -193998476 + CT-rich Low_complexity Low_complexity 1 194 0 246 171 26 13 chr4 8329878 8329954 -193998393 + (TCCA)n Simple_repeat Simple_repeat 1 77 0 2045 128 20 0 chr4 8331719 8332016 -193996331 - AluSx SINE Alu -9 303 1 277 354 33 39 chr4 8332028 8332209 -193996138 - L1ME LINE L1 -302 5819 5640 232 359 39 55 chr4 8332472 8332781 -193995566 - L2 LINE L2 -43 3229 2926 1767 202 35 86 chr4 8332781 8333429 -193994918 - LTR6A LTR ERV1 0 564 1 1608 231 53 45 chr4 8333499 8333993 -193994354 - MLT1D LTR MaLR -7 498 1 187 312 117 0 chr4 8334099 8334176 -193994171 - L2 LINE L2 -8 3305 3220 356 352 120 13 chr4 8334237 8334606 -193993741 - L2 LINE L2 -227 3045 2635 351 289 0 12 chr4 8334797 8335298 -193993049 + (CA)n Simple_repeat Simple_repeat 1 494 0 322 240 53 93 chr4 8335806 8335956 -193992391 + MIR3 SINE MIR 31 174 -34 413 342 62 65 chr4 8336474 8336810 -193991537 - L2 LINE L2 -20 3252 2918 1423 241 78 37 chr4 8337000 8337511 -193990836 - MLT1H LTR MaLR 0 549 18 589 252 43 5 chr4 8338151 8338537 -193989810 - MLT1J2 LTR MaLR -7 443 15 379 249 163 11 chr4 8338549 8338731 -193989616 + MIR SINE MIR 6 214 -48 545 272 121 13 chr4 8339650 8339874 -193988473 + MIR SINE MIR 14 261 -1 203 257 27 81 chr4 8340282 8340356 -193987991 + MIR3 SINE MIR 88 157 -51 322 286 169 0 chr4 8341037 8341215 -193987132 + L2 LINE L2 2562 2769 -545 288 318 28 9 chr4 8341615 8341722 -193986625 + L2 LINE L2 3154 3262 -51 810 219 12 0 chr4 8341754 8341914 -193986433 - FRAM SINE Alu -17 159 1 679 210 0 80 chr4 8342105 8342281 -193986066 + MER63 DNA MER1_type 1 788 -48 301 262 28 21 chr4 8342525 8342634 -193985713 + MIR SINE MIR 63 171 -37 213 318 15 0 chr4 8342837 8342903 -193985444 - MIR SINE MIR -77 131 65 234 188 21 0 chr4 8344247 8344295 -193984052 - MIR3 SINE MIR -48 160 112 630 192 0 0 chr4 8344785 8344884 -193983463 + FLAM_C SINE Alu 12 110 -33 357 366 36 5 chr4 8344942 8345136 -193983211 - MIR SINE MIR -3 259 60 1193 195 174 50 chr4 8345889 8346268 -193982079 - MSTB LTR MaLR 0 426 1 260 274 189 37 chr4 8346671 8347233 -193981114 - L2 LINE L2 -1 3271 2632 191 259 19 0 chr4 8347366 8347420 -193980927 - MIR SINE MIR -119 143 89 506 269 39 19 chr4 8348139 8348295 -193980052 + MIR SINE MIR 70 228 -34 243 0 0 0 chr4 8348696 8348723 -193979624 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 204 309 24 24 chr4 8349305 8349389 -193978958 - L2 LINE L2 -13 3259 3176 357 233 29 0 chr4 8350727 8350830 -193977517 - MIR SINE MIR -62 146 88 341 338 159 7 chr4 8351466 8351611 -193976736 + MIR SINE MIR 4 170 -92 603 279 29 113 chr4 8354919 8355335 -193973012 - L1ME3A LINE L1 -283 5887 5507 1713 236 158 61 chr4 8355353 8356055 -193972292 - MER21B LTR ERV1 -81 782 13 1132 264 138 114 chr4 8356243 8357493 -193970854 - L1MC4 LINE L1 -124 7918 6623 180 0 0 0 chr4 8357493 8357513 -193970834 + (GGAA)n Simple_repeat Simple_repeat 4 23 0 1132 264 138 114 chr4 8357513 8357791 -193970556 - L1MC4 LINE L1 -1419 6623 6353 615 306 96 16 chr4 8357871 8358234 -193970113 - L1ME3A LINE L1 -139 6031 5640 394 117 0 164 chr4 8360090 8360304 -193968043 + (CCCCCA)n Simple_repeat Simple_repeat 2 180 0 225 104 0 130 chr4 8360354 8360431 -193967916 + (CCCCCA)n Simple_repeat Simple_repeat 3 69 0 329 266 63 28 chr4 8360721 8360864 -193967483 - MLT1K LTR MaLR -369 219 72 184 213 21 21 chr4 8361437 8361484 -193966863 + L2 LINE L2 3214 3260 -12 426 39 0 0 chr4 8361898 8361950 -193966397 + (TG)n Simple_repeat Simple_repeat 2 53 0 236 338 23 30 chr4 8362049 8362182 -193966165 + MIR3 SINE MIR 13 144 -64 309 320 70 66 chr4 8363089 8363345 -193965002 - L2 LINE L2 -5 3267 3011 225 335 50 19 chr4 8365236 8365397 -193962950 + HAL1b LINE L1 482 647 -701 188 274 286 24 chr4 8367373 8367621 -193960726 - L2 LINE L2 -81 3232 2920 289 297 239 7 chr4 8367816 8367971 -193960376 - L2 LINE L2 -541 2773 2583 350 343 119 21 chr4 8367981 8368267 -193960080 - L2 LINE L2 -870 2444 2131 562 211 29 0 chr4 8368447 8368622 -193959725 + (TCCA)n Simple_repeat Simple_repeat 1 180 0 856 163 12 0 chr4 8368649 8368821 -193959526 + (TCCA)n Simple_repeat Simple_repeat 2 175 0 264 320 16 8 chr4 8369105 8369227 -193959120 + MIR SINE MIR 94 216 -46 242 273 0 0 chr4 8369696 8369751 -193958596 - MIR SINE MIR -68 140 86 998 213 63 14 chr4 8370012 8370219 -193958128 - MER20 DNA MER1_type 0 219 3 454 248 51 15 chr4 8371432 8371569 -193956778 + MIR SINE MIR 46 187 -75 860 177 6 0 chr4 8373188 8373363 -193954984 + (TCCA)n Simple_repeat Simple_repeat 4 179 0 839 201 3 0 chr4 8373401 8373759 -193954588 + (TCCA)n Simple_repeat Simple_repeat 1 359 0 242 380 124 31 chr4 8373792 8374244 -193954103 - L2 LINE L2 0 3313 2820 456 236 24 0 chr4 8374291 8374414 -193953933 - MER58C DNA MER1_type 0 215 90 1251 225 104 12 chr4 8374423 8374846 -193953501 - MLT1C LTR MaLR 0 467 6 282 368 31 25 chr4 8375063 8375226 -193953121 - MIR SINE MIR -10 252 89 265 279 103 37 chr4 8375430 8375566 -193952781 - L3 LINE CR1 -89 1488 1344 814 221 124 0 chr4 8376116 8376374 -193951973 - MLT1C LTR MaLR -153 314 25 201 299 42 45 chr4 8376404 8376551 -193951796 - MIR SINE MIR -94 114 9 732 171 6 23 chr4 8377298 8377474 -193950873 + (ATGGTG)n Simple_repeat Simple_repeat 4 176 0 300 290 0 0 chr4 8377448 8377572 -193950775 + (TGG)n Simple_repeat Simple_repeat 1 124 0 * 610 208 17 11 chr4 8377572 8377750 -193950597 + (ATGGTG)n Simple_repeat Simple_repeat 1 179 0 2035 105 0 20 chr4 8379583 8379877 -193948470 + AluJb SINE Alu 23 310 -2 504 328 25 20 chr4 8380047 8380309 -193948038 + MIR SINE MIR 2 262 0 1552 204 40 3 chr4 8381012 8381118 -193947229 + AluJo SINE Alu 1 102 -210 2030 134 23 7 chr4 8381118 8381425 -193946922 - AluSx SINE Alu 0 312 1 1552 204 40 3 chr4 8381425 8381617 -193946730 + AluJo SINE Alu 102 310 -2 318 257 119 9 chr4 8381640 8381749 -193946598 + L1M4 LINE L1 2673 2793 -3353 397 278 98 40 chr4 8382026 8382199 -193946148 + MIR SINE MIR 68 250 -12 347 287 130 0 chr4 8383629 8383737 -193944610 - L2 LINE L2 -1 3312 3191 1103 193 44 139 chr4 8383750 8384159 -193944188 + MLT1A2 LTR MaLR 1 370 -4 560 277 113 27 chr4 8384170 8384499 -193943848 - L2 LINE L2 -129 3184 2828 544 278 44 15 chr4 8384864 8385069 -193943278 + MLT1J2 LTR MaLR 240 450 0 186 43 0 0 chr4 8385725 8385748 -193942599 + (TC)n Simple_repeat Simple_repeat 1 23 0 215 299 51 26 chr4 8385868 8385985 -193942362 - MIR SINE MIR -72 136 17 238 273 0 0 chr4 8386885 8386940 -193941407 - L2 LINE L2 -10 3262 3208 201 265 118 0 chr4 8387437 8387505 -193940842 + MIR3 SINE MIR 92 167 -41 274 303 107 0 chr4 8387991 8388113 -193940234 + MIR3 SINE MIR 29 163 -45 314 279 81 62 chr4 8388119 8388280 -193940067 - L2 LINE L2 0 3272 3109 208 231 26 0 chr4 8388393 8388471 -193939876 + (TGGA)n Simple_repeat Simple_repeat 1 80 0 623 225 21 0 chr4 8388490 8388770 -193939577 + (TGGA)n Simple_repeat Simple_repeat 1 285 0 204 178 0 44 chr4 8388771 8388816 -193939531 + GA-rich Low_complexity Low_complexity 3 45 0 2168 113 0 3 chr4 8391593 8391903 -193936444 + AluSq SINE Alu 1 309 -4 461 296 39 82 chr4 8391909 8392115 -193936232 + MIR SINE MIR 66 262 0 604 304 68 27 chr4 8392815 8393035 -193935312 + MIR SINE MIR 13 241 -21 26 30 0 0 chr4 8393374 8393407 -193934940 + AT_rich Low_complexity Low_complexity 1 33 0 303 311 0 49 chr4 8393426 8393548 -193934799 - L2 LINE L2 -1 3312 3197 3144 222 34 4 chr4 8393677 8394502 -193933845 + L1M4 LINE L1 2412 3261 -2885 194 283 19 0 chr4 8394806 8394859 -193933488 - MIR SINE MIR -65 143 90 180 359 39 10 chr4 8394977 8395080 -193933267 + MIR3 SINE MIR 97 202 -6 316 248 204 0 chr4 8396761 8396874 -193931473 - MIR SINE MIR -119 143 8 309 357 8 16 chr4 8397028 8397157 -193931190 - MIR SINE MIR -118 144 17 238 264 35 0 chr4 8398054 8398141 -193930206 - MER45 DNA AcHobo -1466 115 26 190 227 68 0 chr4 8398242 8398286 -193930061 + L2 LINE L2 3244 3290 -23 2261 206 27 2 chr4 8398311 8398749 -193929598 + L1MB5 LINE L1 5718 6166 -8 372 298 128 30 chr4 8398967 8399202 -193929145 - L2 LINE L2 -109 3163 2906 283 241 60 0 chr4 8400035 8400118 -193928229 - MER81 DNA DNA 0 114 27 332 298 0 10 chr4 8400214 8400318 -193928029 + MIR SINE MIR 45 147 -61 214 316 13 13 chr4 8400415 8400494 -193927853 + MIR SINE MIR 67 145 -117 1410 189 79 16 chr4 8400678 8401044 -193927303 + MLT1C LTR MaLR 3 391 -76 22 56 0 0 chr4 8401711 8401747 -193926600 + AT_rich Low_complexity Low_complexity 1 36 0 224 297 203 7 chr4 8401812 8401950 -193926397 + MIR3 SINE MIR 3 167 -41 297 51 0 0 chr4 8401994 8402033 -193926314 + (TCCA)n Simple_repeat Simple_repeat 1 39 0 931 71 20 45 chr4 8402045 8402368 -193925979 + (TCCA)n Simple_repeat Simple_repeat 1 315 0 377 258 129 12 chr4 8402878 8403041 -193925306 + L2 LINE L2 2875 3056 -257 196 275 12 62 chr4 8403222 8403302 -193925045 + MIR3 SINE MIR 127 202 -6 310 331 128 12 chr4 8403426 8403598 -193924749 - MIR SINE MIR -46 216 25 200 360 27 36 chr4 8404626 8404737 -193923610 + MIR SINE MIR 35 144 -118 282 301 109 65 chr4 8405410 8405812 -193922535 + L2 LINE L2 2810 3229 -43 216 192 19 39 chr4 8405908 8405960 -193922387 - L2 LINE L2 -14 3258 3208 250 286 134 9 chr4 8406210 8406322 -193922025 - MER96 DNA MER1_type? -39 136 11 189 299 41 62 chr4 8406857 8406954 -193921393 + MIR3 SINE MIR 88 182 -26 316 309 158 29 chr4 8407426 8407628 -193920719 - MIR SINE MIR -43 219 3 196 231 0 0 chr4 8408322 8408361 -193919986 + L2 LINE L2 3263 3301 -12 222 362 51 22 chr4 8408469 8408607 -193919740 + MIR3 SINE MIR 5 146 -62 334 220 66 0 chr4 8408678 8408769 -193919578 + MER5A DNA MER1_type 10 106 -83 187 267 287 0 chr4 8408703 8408804 -193919543 - MER5A DNA MER1_type -24 165 36 * 190 332 72 9 chr4 8409209 8409432 -193918915 + L2 LINE L2 2738 2974 -340 211 336 60 0 chr4 8409469 8409585 -193918762 + L2 LINE L2 3141 3263 -9 182 331 83 53 chr4 8409614 8409783 -193918564 + MIR SINE MIR 45 218 -44 1583 202 80 36 chr4 8410091 8410506 -193917841 + MLT1D LTR MaLR 1 433 -72 532 216 16 0 chr4 8410511 8410636 -193917711 - MER47A DNA MER2_type 0 366 240 530 232 0 0 chr4 8410637 8410749 -193917598 - MER47A DNA MER2_type -254 112 1 351 203 0 0 chr4 8410749 8410818 -193917529 + MLT1D LTR MaLR 437 505 0 417 290 36 67 chr4 8411953 8412110 -193916237 + MIR SINE MIR 45 208 -54 2120 114 0 31 chr4 8412110 8412427 -193915920 + AluSx SINE Alu 1 307 -5 417 290 36 67 chr4 8412427 8412463 -193915884 + MIR SINE MIR 208 244 -18 743 263 91 45 chr4 8412934 8413330 -193915017 + MLT1C LTR MaLR 54 467 0 220 246 87 43 chr4 8414337 8414475 -193913872 + L2 LINE L2 2921 3064 -208 205 378 64 13 chr4 8414685 8414841 -193913506 - L3 LINE CR1 -7 1570 1407 198 0 0 0 chr4 8415024 8415046 -193913301 + (TTCA)n Simple_repeat Simple_repeat 3 24 0 223 254 0 17 chr4 8415121 8415180 -193913167 - MIR SINE MIR -56 152 95 211 327 84 0 chr4 8415448 8415555 -193912792 - MIR SINE MIR -145 117 2 458 317 49 22 chr4 8416265 8416448 -193911899 + MIR SINE MIR 2 189 -73 197 330 152 35 chr4 8418513 8418931 -193909416 + L2 LINE L2 2738 3268 -45 601 220 6 19 chr4 8418931 8419081 -193909266 - L1 LINE L1 -1764 4382 4233 2700 137 2 5 chr4 8419081 8419495 -193908852 + L1PB3 LINE L1 5734 6147 -7 332 167 14 0 chr4 8419526 8419598 -193908749 + GA-rich Low_complexity Low_complexity 3 75 0 829 161 0 0 chr4 8420290 8420427 -193907920 - AluJo SINE Alu -175 137 1 1758 176 0 29 chr4 8420719 8421025 -193907322 - AluJo SINE Alu -15 297 1 608 210 105 6 chr4 8421099 8421280 -193907067 + L1MCc LINE L1 1167 1365 -5058 * 1783 236 31 5 chr4 8421273 8421718 -193906629 + L1ME1 LINE L1 5705 6161 -5 300 291 220 6 chr4 8421798 8421980 -193906367 - MIR SINE MIR -21 241 21 488 295 84 40 chr4 8422135 8422362 -193905985 + MIR SINE MIR 22 258 -4 317 154 0 0 chr4 8422489 8422541 -193905806 - MLT1B LTR MaLR -317 73 22 206 298 0 0 chr4 8423858 8423905 -193904442 - MIR SINE MIR -142 120 74 204 296 0 102 chr4 8424062 8424160 -193904187 + L2 LINE L2 3185 3272 0 833 139 11 11 chr4 8424183 8424363 -193903984 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 210 138 0 125 chr4 8424756 8424836 -193903511 + (CCCCCA)n Simple_repeat Simple_repeat 3 72 0 384 98 0 152 chr4 8424875 8425039 -193903308 + (CCCCCA)n Simple_repeat Simple_repeat 3 141 0 1269 249 64 23 chr4 8425266 8425703 -193902644 - MLT1C LTR MaLR -6 461 7 1023 264 162 26 chr4 8426631 8427415 -193900932 - L2 LINE L2 -8 3305 2421 260 258 16 32 chr4 8428466 8428590 -193899757 + CT-rich Low_complexity Low_complexity 3 124 0 204 40 0 0 chr4 8428660 8428685 -193899662 + (GGGGA)n Simple_repeat Simple_repeat 2 26 0 320 130 19 0 chr4 8428875 8428929 -193899418 - MLT1C LTR MaLR -409 58 4 390 173 13 0 chr4 8429597 8429672 -193898675 - MLT1C LTR MaLR -69 398 323 213 265 0 0 chr4 8429912 8429961 -193898386 - MIR SINE MIR -111 151 103 345 189 18 18 chr4 8430885 8430996 -193897351 + CT-rich Low_complexity Low_complexity 3 113 0 873 175 11 23 chr4 8431009 8431464 -193896883 + CT-rich Low_complexity Low_complexity 1 449 0 345 310 40 38 chr4 8431472 8431635 -193896712 + MIR SINE MIR 5 180 -62 861 175 2 0 chr4 8432770 8433229 -193895118 + (TGAG)n Simple_repeat Simple_repeat 1 460 0 267 234 0 0 chr4 8433243 8433320 -193895027 + (TGAG)n Simple_repeat Simple_repeat 3 79 0 195 42 0 0 chr4 8433348 8433372 -193894975 + (CAG)n Simple_repeat Simple_repeat 1 24 0 183 299 98 43 chr4 8433741 8433905 -193894442 - L2 LINE L2 -520 2794 2622 2142 123 0 3 chr4 8434213 8434514 -193893833 - AluSx SINE Alu -12 300 1 349 318 73 7 chr4 8434679 8434830 -193893517 + MIR SINE MIR 32 192 -70 264 291 0 44 chr4 8434952 8435134 -193893213 + (TTGGGG)n Simple_repeat Simple_repeat 2 175 0 303 293 0 37 chr4 8435236 8435566 -193892781 + (TTGGGG)n Simple_repeat Simple_repeat 1 317 0 222 263 0 65 chr4 8435776 8435962 -193892385 + (TTGGGG)n Simple_repeat Simple_repeat 2 175 0 219 296 12 19 chr4 8435912 8436074 -193892273 + (GGGTG)n Simple_repeat Simple_repeat 2 162 0 * 208 274 0 65 chr4 8436006 8436192 -193892155 + (TTGGGG)n Simple_repeat Simple_repeat 2 175 0 * 260 278 11 33 chr4 8436144 8436324 -193892023 + (GGGTG)n Simple_repeat Simple_repeat 2 177 0 * 313 255 0 54 chr4 8436218 8436402 -193891945 + (TTGGGG)n Simple_repeat Simple_repeat 2 175 0 235 311 0 33 chr4 8436316 8436496 -193891851 + (TTAGGG)n Simple_repeat Simple_repeat 2 175 0 * 279 296 3 35 chr4 8436708 8437055 -193891292 + (TTGGGG)n Simple_repeat Simple_repeat 1 335 0 318 308 0 27 chr4 8437249 8437590 -193890757 + (TTGGGG)n Simple_repeat Simple_repeat 1 331 0 284 290 0 32 chr4 8437618 8437773 -193890574 + (TTGGGG)n Simple_repeat Simple_repeat 2 151 0 212 374 0 0 chr4 8437712 8437886 -193890461 + (TTAGGG)n Simple_repeat Simple_repeat 2 175 0 * 2116 171 45 3 chr4 8437979 8438353 -193889994 - MLT1B LTR MaLR 0 390 1 252 0 0 0 chr4 8438376 8438404 -193889943 + (TGAA)n Simple_repeat Simple_repeat 1 28 0 190 333 111 47 chr4 8438880 8439051 -193889296 + MIR SINE MIR 8 189 -73 210 278 93 62 chr4 8439097 8439194 -193889153 + L2 LINE L2 3212 3311 -2 418 332 124 13 chr4 8440631 8440938 -193887409 - L2 LINE L2 0 3272 2932 259 312 35 30 chr4 8441129 8441270 -193887077 + MIR SINE MIR 14 149 -59 319 267 30 20 chr4 8441415 8441516 -193886831 + MIR SINE MIR 98 199 -63 339 331 48 0 chr4 8444248 8444372 -193883975 + MIR SINE MIR 29 158 -104 239 316 25 0 chr4 8444647 8444726 -193883621 + L2 LINE L2 3173 3253 -19 273 269 234 28 chr4 8445048 8445193 -193883154 - MIR SINE MIR -80 182 8 180 262 90 107 chr4 8445293 8445415 -193882932 + MIR SINE MIR 28 147 -115 357 329 79 73 chr4 8446040 8446629 -193881718 - L2 LINE L2 0 3272 2649 223 261 77 0 chr4 8447026 8447091 -193881256 + MIR SINE MIR 123 192 -70 408 286 64 14 chr4 8447864 8448004 -193880343 - MIR SINE MIR -83 179 33 508 233 78 49 chr4 8448140 8448471 -193879876 - MLT1J2 LTR MaLR -23 427 46 197 357 47 0 chr4 8448567 8448696 -193879651 - L2 LINE L2 -620 2694 2560 197 336 219 0 chr4 8449674 8449802 -193878545 + MIR3 SINE MIR 45 200 -8 245 389 108 32 chr4 8449969 8450311 -193878036 - L3 LINE CR1 -253 1324 957 735 269 45 14 chr4 8450869 8451092 -193877255 + MIR SINE MIR 32 261 -1 738 202 0 0 chr4 8451104 8451282 -193877065 + (TGG)n Simple_repeat Simple_repeat 2 179 0 240 67 0 0 chr4 8451282 8451312 -193877035 + (ATG)n Simple_repeat Simple_repeat 1 30 0 763 244 36 0 chr4 8451619 8451787 -193876560 - MER5B DNA MER1_type -4 174 1 225 247 14 41 chr4 8452085 8452158 -193876189 - MIR SINE MIR -65 143 73 609 209 0 4 chr4 8452160 8452414 -193875933 + (TCCA)n Simple_repeat Simple_repeat 1 252 0 208 333 48 0 chr4 8452834 8452897 -193875450 + L2 LINE L2 3233 3298 -15 328 306 60 16 chr4 8452920 8453103 -193875244 - L2 LINE L2 -190 3123 2933 190 320 117 52 chr4 8454202 8454433 -193873914 - L2 LINE L2 -121 3151 2906 203 293 0 0 chr4 8455470 8455528 -193872819 - L2 LINE L2 -335 2978 2921 274 301 32 49 chr4 8455868 8455991 -193872356 + L2 LINE L2 2634 2754 -560 279 269 23 46 chr4 8456051 8456181 -193872166 + L2 LINE L2 3133 3259 -13 261 119 0 0 chr4 8456181 8456223 -193872124 + (TGAA)n Simple_repeat Simple_repeat 1 42 0 1286 238 121 12 chr4 8456737 8457158 -193871189 - MLT1C LTR MaLR 0 467 1 188 135 27 0 chr4 8457705 8457742 -193870605 + (CA)n Simple_repeat Simple_repeat 1 38 0 948 206 127 57 chr4 8458251 8458567 -193869780 - MLT2C1 LTR ERVL -47 350 13 185 333 61 27 chr4 8458722 8458869 -193869478 + L2 LINE L2 3045 3196 -117 207 177 122 68 chr4 8459314 8459461 -193868886 + (GCTG)n Simple_repeat Simple_repeat 3 157 0 410 352 116 0 chr4 8460300 8460618 -193867729 + L2 LINE L2 2957 3311 -2 270 326 12 0 chr4 8460639 8460725 -193867622 + L2 LINE L2 3184 3270 -2 1076 255 28 31 chr4 8460996 8461545 -193866802 - MER77 LTR ERV1 -7 598 1 283 265 39 29 chr4 8461847 8461949 -193866398 - L2 LINE L2 -20 3252 3150 206 269 90 0 chr4 8462511 8462589 -193865758 + MER91A DNA MER1_type 21 105 -91 1189 230 90 35 chr4 8464959 8465123 -193863224 + MLT1C LTR MaLR 1 155 -312 2374 66 0 10 chr4 8465123 8465427 -193862920 + AluY SINE Alu 1 301 -10 1189 230 90 35 chr4 8465427 8465687 -193862660 + MLT1C LTR MaLR 155 458 -9 1444 54 0 16 chr4 8465829 8466015 -193862332 + L1PA8 LINE L1 5990 6172 0 674 257 138 20 chr4 8468706 8469137 -193859210 - MLT1D LTR MaLR 0 390 2 272 230 11 81 chr4 8471128 8471215 -193857132 - L2 LINE L2 0 3272 3192 189 296 0 0 chr4 8473064 8473108 -193855239 + MIR SINE MIR 219 262 0 245 327 82 62 chr4 8473229 8473678 -193854669 + L2 LINE L2 2811 3268 -4 237 261 0 31 chr4 8473745 8473810 -193854537 + MIR3 SINE MIR 96 158 -50 1644 194 84 19 chr4 8474360 8474788 -193853559 - L1MA8 LINE L1 -278 6013 5558 540 268 76 98 chr4 8475048 8475496 -193852851 - MLT1J2 LTR MaLR -10 440 3 273 356 70 0 chr4 8475636 8475751 -193852596 + MIR3 SINE MIR 47 169 -39 414 114 0 0 chr4 8476140 8476210 -193852137 + (CA)n Simple_repeat Simple_repeat 2 71 0 448 365 88 55 chr4 8476240 8476482 -193851865 - L1ME4a LINE L1 -158 5963 5704 1908 171 44 22 chr4 8476482 8476844 -193851503 - MLT1A2 LTR MaLR 0 374 5 448 365 88 55 chr4 8476844 8476963 -193851384 - L1ME4a LINE L1 -417 5704 5590 320 307 63 0 chr4 8477524 8477651 -193850696 + MIR SINE MIR 48 182 -80 274 264 110 11 chr4 8477755 8477846 -193850501 - MIR3 SINE MIR -3 205 106 257 343 97 27 chr4 8478356 8478533 -193849814 - MIR SINE MIR -33 175 3 265 271 0 0 chr4 8478568 8478638 -193849709 + C-rich Low_complexity Low_complexity 1 70 0 263 295 103 12 chr4 8479147 8479340 -193849007 - MIR3 SINE MIR -44 218 2 503 326 45 22 chr4 8479768 8479992 -193848355 - MIR SINE MIR -16 246 18 209 279 0 7 chr4 8481229 8481365 -193846982 + (TG)n Simple_repeat Simple_repeat 1 135 0 186 326 141 11 chr4 8482139 8482231 -193846116 - L2 LINE L2 -5 3267 3164 257 312 21 71 chr4 8484790 8484931 -193843416 - MIR3 SINE MIR -71 137 4 383 133 76 0 chr4 8485582 8485687 -193842660 + (CAGAGA)n Simple_repeat Simple_repeat 2 114 0 387 340 98 16 chr4 8486553 8486747 -193841600 - MIR SINE MIR -21 241 32 532 229 48 101 chr4 8486750 8486938 -193841409 + MER45A DNA AcHobo 1 178 0 237 325 95 16 chr4 8487687 8487813 -193840534 + MIR SINE MIR 108 243 -19 437 359 30 0 chr4 8487861 8488059 -193840288 + MIR SINE MIR 23 226 -36 186 277 229 0 chr4 8488059 8488142 -193840205 + MIR SINE MIR 82 183 -79 252 184 0 0 chr4 8488607 8488656 -193839691 + (TCCA)n Simple_repeat Simple_repeat 4 52 0 305 313 80 28 chr4 8488723 8488899 -193839448 + MIR SINE MIR 69 253 -9 2136 107 3 7 chr4 8489315 8489624 -193838723 - AluSc SINE Alu -1 308 1 305 195 0 12 chr4 8490335 8490417 -193837930 + GA-rich Low_complexity Low_complexity 4 84 0 307 297 23 62 chr4 8490465 8490501 -193837846 + L1ME4a LINE L1 5998 6034 -87 1990 99 60 0 chr4 8490501 8490785 -193837562 - AluSx SINE Alu -9 303 3 307 297 23 62 chr4 8490785 8490876 -193837471 + L1ME4a LINE L1 6034 6120 -1 254 283 114 18 chr4 8491268 8491434 -193836913 - LTR33A LTR ERVL -73 450 269 204 297 193 36 chr4 8492870 8493062 -193835285 + L2 LINE L2 2926 3147 -166 249 83 0 0 chr4 8493485 8493521 -193834826 + (GA)n Simple_repeat Simple_repeat 2 37 0 243 61 0 0 chr4 8493552 8493591 -193834756 + (CA)n Simple_repeat Simple_repeat 1 72 0 243 61 0 0 chr4 8493591 8493624 -193834723 + (CA)n Simple_repeat Simple_repeat 2 34 0 219 36 0 107 chr4 8493643 8493699 -193834648 + (CAGAGA)n Simple_repeat Simple_repeat 3 52 0 498 122 31 0 chr4 8494498 8494596 -193833751 + GA-rich Low_complexity Low_complexity 2 102 0 416 236 49 24 chr4 8495214 8495337 -193833010 + MIR SINE MIR 20 145 -63 238 318 55 36 chr4 8496553 8496663 -193831684 - L2 LINE L2 -96 3217 3106 1286 223 72 19 chr4 8496825 8497202 -193831145 - MER77 LTR ERV1 -208 397 1 278 302 21 9 chr4 8497292 8497403 -193830944 - MIR SINE MIR -59 149 75 370 272 54 60 chr4 8497963 8498147 -193830200 + MIR3 SINE MIR 7 189 -19 183 100 0 0 chr4 8498222 8498252 -193830095 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 234 324 100 62 chr4 8498258 8498468 -193829879 - L2 LINE L2 -18 3254 3037 191 304 18 0 chr4 8501583 8501639 -193826708 + MIR SINE MIR 82 138 -70 297 263 102 34 chr4 8503132 8503250 -193825097 + MIR SINE MIR 21 146 -116 307 278 56 49 chr4 8503879 8504023 -193824324 + MIR SINE MIR 89 233 -29 280 267 73 63 chr4 8504159 8504350 -193823997 - MIR SINE MIR -43 219 27 385 220 41 23 chr4 8504748 8505046 -193823301 + CT-rich Low_complexity Low_complexity 1 303 0 228 280 0 0 chr4 8505048 8505098 -193823249 + C-rich Low_complexity Low_complexity 1 50 0 301 201 35 41 chr4 8505100 8505269 -193823078 + CT-rich Low_complexity Low_complexity 1 168 0 266 269 74 37 chr4 8505394 8505502 -193822845 - MIR3 SINE MIR -16 192 81 241 175 0 0 chr4 8505536 8505576 -193822771 - L2 LINE L2 -8 3264 3225 472 214 172 38 chr4 8506228 8506572 -193821775 + MLT1C LTR MaLR 7 488 -17 221 257 16 49 chr4 8508004 8508187 -193820160 + CT-rich Low_complexity Low_complexity 4 180 0 327 217 24 0 chr4 8508426 8508509 -193819838 - MER33 DNA MER1_type -6 357 273 1303 269 62 13 chr4 8508510 8508978 -193819369 + L1MC1 LINE L1 5836 6326 -7 762 169 35 20 chr4 8508986 8509187 -193819160 - MER33 DNA MER1_type -76 248 45 1921 197 91 25 chr4 8509365 8509837 -193818510 + MLT1D LTR MaLR 1 503 -2 252 77 0 0 chr4 8510168 8510207 -193818140 + (TC)n Simple_repeat Simple_repeat 1 39 0 193 309 73 73 chr4 8510207 8510343 -193818004 + L2 LINE L2 3137 3272 0 1982 100 38 10 chr4 8510550 8510863 -193817484 - AluSx SINE Alu 0 312 1 1034 233 177 3 chr4 8510924 8511302 -193817045 - MLT1C LTR MaLR -17 450 7 315 278 48 88 chr4 8511308 8511581 -193816766 + L2 LINE L2 2963 3224 -89 286 369 39 27 chr4 8513219 8513401 -193814946 + MIR SINE MIR 7 191 -49 192 242 0 91 chr4 8513408 8513474 -193814873 + MIR SINE MIR 30 89 -119 196 342 133 0 chr4 8514482 8514602 -193813745 + MIR SINE MIR 108 243 -19 195 42 0 0 chr4 8514957 8514981 -193813366 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 357 293 83 11 chr4 8515153 8515334 -193813013 - MIR SINE MIR -21 241 48 195 291 42 28 chr4 8515866 8515989 -193812358 + MIR3 SINE MIR 25 154 -54 201 74 0 0 chr4 8516313 8516340 -193812007 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 1235 214 82 34 chr4 8516604 8517047 -193811300 + MLT1D LTR MaLR 22 467 0 552 330 47 0 chr4 8517561 8517773 -193810574 + MIR SINE MIR 28 249 -13 390 265 104 90 chr4 8518264 8518475 -193809872 + MIR SINE MIR 21 234 -28 193 331 70 14 chr4 8518584 8518726 -193809621 + L3 LINE CR1 1169 1318 -259 229 279 48 57 chr4 8518994 8519099 -193809248 - MIR SINE MIR -29 179 75 462 292 8 0 chr4 8519323 8519443 -193808904 + MIR3 SINE MIR 81 201 -7 200 338 0 14 chr4 8519600 8519674 -193808673 - L2 LINE L2 0 3313 3241 281 356 35 26 chr4 8519703 8519818 -193808529 - L2 LINE L2 -12 3301 3186 1425 158 81 0 chr4 8519873 8520146 -193808201 + AluJo SINE Alu 1 295 -17 216 0 0 0 chr4 8520735 8520759 -193807588 + (CA)n Simple_repeat Simple_repeat 1 24 0 440 280 45 26 chr4 8521085 8521298 -193807049 - MIR SINE MIR -44 218 7 198 280 17 68 chr4 8521403 8521521 -193806826 + MIR3 SINE MIR 81 192 -16 296 295 0 0 chr4 8521700 8521778 -193806569 + CT-rich Low_complexity Low_complexity 2 79 0 233 306 0 24 chr4 8523002 8523087 -193805260 + GA-rich Low_complexity Low_complexity 1 83 0 330 321 116 50 chr4 8523087 8523299 -193805048 + L1M4 LINE L1 3074 3293 -2853 194 61 0 30 chr4 8523299 8523332 -193805015 + (CAAAA)n Simple_repeat Simple_repeat 2 33 0 330 321 116 50 chr4 8523332 8523506 -193804841 + L1M4 LINE L1 3293 3454 -2692 385 338 79 46 chr4 8525327 8525721 -193802626 - L1M4 LINE L1 -2771 3375 2972 503 251 133 15 chr4 8525867 8526070 -193802277 + MIR SINE MIR 14 240 -22 203 257 27 81 chr4 8526495 8526569 -193801778 + MIR3 SINE MIR 88 157 -51 210 270 0 0 chr4 8527252 8527326 -193801021 + (CA)n Simple_repeat Simple_repeat 1 74 0 518 360 76 73 chr4 8527600 8528191 -193800156 - L1MC4a LINE L1 -1611 6197 5605 744 195 37 60 chr4 8528813 8528991 -193799356 + L1ME1 LINE L1 5952 6126 -40 2297 95 0 3 chr4 8528991 8529296 -193799051 + AluSq SINE Alu 1 304 -9 744 195 37 60 chr4 8529296 8529332 -193799015 + L1ME1 LINE L1 6126 6161 -5 491 261 15 15 chr4 8530575 8530705 -193797642 + L2 LINE L2 3142 3271 -1 529 279 8 0 chr4 8531246 8531375 -193796972 + MIR SINE MIR 94 223 -39 188 268 36 0 chr4 8533128 8533184 -193795163 - L2 LINE L2 -8 3264 3207 391 296 254 0 chr4 8533197 8533477 -193794870 - L2 LINE L2 -10 3262 2912 483 226 82 7 chr4 8533902 8534048 -193794299 + MLT1B LTR MaLR 29 185 -205 206 23 93 0 chr4 8534049 8534092 -193794255 + CT-rich Low_complexity Low_complexity 2 48 0 575 232 53 0 chr4 8534158 8534309 -193794038 + MLT1B LTR MaLR 232 390 0 330 263 105 15 chr4 8536060 8536193 -193792154 + MIR3 SINE MIR 14 158 -50 234 188 21 0 chr4 8536664 8536712 -193791635 - MIR3 SINE MIR -48 160 112 617 202 0 0 chr4 8537201 8537300 -193791047 + FLAM_C SINE Alu 12 110 -33 377 387 28 5 chr4 8537358 8537570 -193790777 - MIR SINE MIR -3 259 43 1172 192 174 53 chr4 8538301 8538681 -193789666 - MSTB LTR MaLR 0 426 1 267 375 49 34 chr4 8539088 8539355 -193788992 - L2 LINE L2 -1 3312 3042 187 270 209 39 chr4 8539395 8539706 -193788641 - L2 LINE L2 -374 2940 2577 194 333 0 13 chr4 8539773 8539848 -193788499 - MIR SINE MIR -111 151 78 26 0 0 0 chr4 8540088 8540114 -193788233 + GC_rich Low_complexity Low_complexity 1 26 0 624 282 58 25 chr4 8541279 8541644 -193786703 - MER115 DNA AcHobo -259 434 58 205 313 47 0 chr4 8541749 8541813 -193786534 - L3 LINE CR1 -248 1329 1263 294 377 16 0 chr4 8542784 8542906 -193785441 - MIR SINE MIR -64 198 75 2149 138 67 3 chr4 8543374 8543750 -193784597 - MSTA LTR MaLR -27 401 2 180 336 96 0 chr4 8546045 8546149 -193782198 + L2 LINE L2 2982 3095 -177 364 273 64 9 chr4 8547030 8547140 -193781207 - MIR SINE MIR -100 162 47 405 164 10 19 chr4 8547594 8547698 -193780649 + (TGGA)n Simple_repeat Simple_repeat 1 103 0 205 303 130 34 chr4 8547802 8548040 -193780307 - L2 LINE L2 -104 3168 2908 195 304 0 0 chr4 8548248 8548294 -193780053 - MIR SINE MIR 0 262 217 2042 90 34 65 chr4 8548485 8548808 -193779539 + AluSq SINE Alu 1 313 0 2342 87 0 0 chr4 8548979 8549290 -193779057 + AluY SINE Alu 1 311 0 185 313 8 62 chr4 8549638 8549766 -193778581 - L2 LINE L2 -272 3041 2921 255 360 72 0 chr4 8549807 8549946 -193778401 - L2 LINE L2 -558 2756 2608 331 281 99 52 chr4 8550393 8550655 -193777692 - L1M2 LINE L1 -4791 2058 1761 323 350 50 7 chr4 8551643 8551790 -193776557 - MIR SINE MIR -61 147 14 586 223 0 0 chr4 8552677 8552798 -193775549 - MIR SINE MIR -62 200 80 551 312 47 31 chr4 8553388 8553705 -193774642 - L1ME1 LINE L1 -4 6162 5841 2390 66 3 0 chr4 8554850 8555152 -193773195 + AluY SINE Alu 1 303 -8 220 263 18 0 chr4 8555791 8555848 -193772499 + GA-rich Low_complexity Low_complexity 4 61 0 380 198 25 136 chr4 8555947 8556109 -193772238 + L2 LINE L2 3170 3313 0 314 286 76 19 chr4 8556143 8556248 -193772099 + MIR SINE MIR 123 233 -29 270 116 0 0 chr4 8557360 8557403 -193770944 + (CA)n Simple_repeat Simple_repeat 2 44 0 312 256 132 31 chr4 8557405 8557534 -193770813 - L2 LINE L2 -22 3291 3150 233 299 188 17 chr4 8557692 8557809 -193770538 + L2 LINE L2 3136 3272 0 1693 247 46 40 chr4 8558790 8558910 -193769437 + L1ME1 LINE L1 5084 5202 -964 2161 123 0 3 chr4 8558910 8559219 -193769128 + AluSc SINE Alu 1 308 -1 1693 247 46 40 chr4 8559219 8559834 -193768513 + L1ME1 LINE L1 5202 5831 -335 2418 66 0 3 chr4 8560468 8560769 -193767578 - AluY SINE Alu -11 300 1 183 325 12 62 chr4 8561849 8561929 -193766418 + MIR SINE MIR 64 139 -123 323 328 156 25 chr4 8562393 8562885 -193765462 + L2 LINE L2 2682 3247 -25 237 33 0 0 chr4 8562897 8562927 -193765420 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 208 231 0 0 chr4 8562992 8563031 -193765316 + (CA)n Simple_repeat Simple_repeat 2 40 0 289 357 56 16 chr4 8563059 8563185 -193765162 + MIR3 SINE MIR 15 145 -63 266 133 85 55 chr4 8563549 8563714 -193764633 + (CACAA)n Simple_repeat Simple_repeat 4 173 0 * 277 189 16 33 chr4 8563598 8563720 -193764627 + (CAA)n Simple_repeat Simple_repeat 1 120 0 803 244 24 8 chr4 8563924 8564170 -193764177 + MSTA LTR MaLR 179 428 0 308 250 0 33 chr4 8566040 8566132 -193762215 + HsTC2 DNA Tc2 1 89 -1809 853 316 110 24 chr4 8566750 8567382 -193760965 - L2 LINE L2 -3 3310 2613 2050 126 0 3 chr4 8568316 8568610 -193759737 + AluSx SINE Alu 5 297 -15 1328 196 40 108 chr4 8568628 8569127 -193759220 - MLT1C LTR MaLR -2 465 1 789 177 0 0 chr4 8571133 8571280 -193757067 - L1MC/D LINE L1 -710 5634 5488 336 315 20 41 chr4 8571288 8571368 -193756979 + MIR SINE MIR 116 193 -69 192 40 0 0 chr4 8571368 8571393 -193756954 + (TGAA)n Simple_repeat Simple_repeat 3 27 0 336 315 20 41 chr4 8571393 8571458 -193756889 + MIR SINE MIR 193 258 -4 234 275 36 58 chr4 8573234 8573372 -193754975 - MIR SINE MIR -90 172 38 944 135 12 0 chr4 8573484 8573654 -193754693 + (TTCA)n Simple_repeat Simple_repeat 2 173 0 321 274 186 0 chr4 8573665 8573767 -193754580 - L2 LINE L2 -15 3257 3137 220 271 82 16 chr4 8573840 8573962 -193754385 - L2 LINE L2 -1469 1845 1716 * 233 241 0 0 chr4 8573956 8574010 -193754337 + L2 LINE L2 3218 3271 -1 201 262 153 38 chr4 8574304 8574487 -193753860 - L2 LINE L2 -411 2903 2700 350 321 38 2 chr4 8574821 8575025 -193753322 + MIR3 SINE MIR 1 259 -3 308 280 136 8 chr4 8575154 8575279 -193753068 - MIR3 SINE MIR -32 176 36 763 246 158 7 chr4 8575285 8575557 -193752790 - MLT1C LTR MaLR -21 446 134 2289 95 0 0 chr4 8575591 8575887 -193752460 - AluSq SINE Alu -17 296 1 680 133 9 0 chr4 8777052 8777157 -193551190 + AluJo/FRAM SINE Alu 187 292 -20 365 206 10 20 chr4 8777168 8777270 -193551077 + L1MC/D LINE L1 4926 5026 -1120 2589 185 61 3 chr4 8777272 8777868 -193550479 + L1MC/D LINE L1 5191 5814 -428 873 259 119 55 chr4 8778282 8778473 -193549874 - MLT1F1 LTR MaLR -74 519 342 1887 194 36 12 chr4 8778473 8778891 -193549456 - MSTA LTR MaLR 0 428 1 873 259 119 55 chr4 8778891 8779160 -193549187 - MLT1F1 LTR MaLR -251 342 1 1839 171 0 13 chr4 8779194 8779510 -193548837 + AluJb SINE Alu 1 312 0 1286 133 0 0 chr4 8779521 8779694 -193548653 + AluSg SINE Alu 1 173 -137 230 348 35 7 chr4 8780164 8780305 -193548042 + L3 LINE CR1 1229 1373 -204 2122 138 3 0 chr4 8780365 8780655 -193547692 - AluJb SINE Alu -21 291 1 269 123 5 0 chr4 8780736 8780785 -193547562 - MLT2C1 LTR ERVL -2 395 358 1005 145 0 0 chr4 8780801 8780980 -193547367 + (TGGA)n Simple_repeat Simple_repeat 2 180 0 531 253 188 5 chr4 8781123 8781325 -193547022 - MIR SINE MIR -1 261 23 507 281 98 12 chr4 8781689 8781853 -193546494 - MER5B DNA MER1_type 0 178 1 240 239 30 30 chr4 8782234 8782301 -193546046 + MIR SINE MIR 16 82 -126 1673 167 7 4 chr4 8783687 8783957 -193544390 + AluJo SINE Alu 33 303 -9 232 254 0 28 chr4 8783961 8784032 -193544315 - MER112 DNA MER1_type -121 139 71 887 89 35 84 chr4 8784426 8784604 -193543743 - L1MA5A LINE L1 -3 6294 6126 2413 90 0 0 chr4 8784604 8784903 -193543444 - AluSx SINE Alu -13 299 1 887 89 35 84 chr4 8784903 8784926 -193543421 - L1MA5A LINE L1 -171 6126 6103 2162 156 32 0 chr4 8784926 8785297 -193543050 - L1MA5A LINE L1 -363 5934 5549 1926 124 20 20 chr4 8785299 8785597 -193542750 - AluSq SINE Alu -15 298 1 994 104 8 0 chr4 8785597 8785731 -193542616 - AluSq/x SINE Alu -178 135 1 458 139 0 12 chr4 8785732 8785818 -193542529 - L1MA5A LINE L1 -737 5563 5479 360 315 145 13 chr4 8786121 8786218 -193542129 + L3 LINE CR1 1234 1317 -260 2005 157 0 28 chr4 8786218 8786537 -193541810 + AluJo SINE Alu 1 310 -2 360 315 145 13 chr4 8786537 8786674 -193541673 + L3 LINE CR1 1317 1499 -78 943 226 62 28 chr4 8787080 8787368 -193540979 + MER63B DNA MER1_type 39 336 -100 29 0 0 0 chr4 8787368 8787397 -193540950 + AT_rich Low_complexity Low_complexity 1 29 0 2204 110 4 0 chr4 8787405 8787719 -193540628 + AluSp SINE Alu 1 315 0 251 183 12 0 chr4 8787720 8787802 -193540545 + (TA)n Simple_repeat Simple_repeat 1 83 0 1832 174 3 0 chr4 8787809 8788103 -193540244 - AluJo SINE Alu -17 295 1 454 206 23 30 chr4 8788109 8788240 -193540107 + MER63B DNA MER1_type 304 433 -2 1462 140 34 45 chr4 8788480 8788772 -193539575 + THE1C LTR MaLR 87 375 0 218 259 0 12 chr4 8788772 8788857 -193539490 + (CA)n Simple_repeat Simple_repeat 1 84 0 2052 113 3 3 chr4 8788920 8789240 -193539107 + AluSx SINE Alu 1 320 0 307 307 106 30 chr4 8789257 8789521 -193538826 + L1ME4a LINE L1 5837 6120 -1 1759 120 76 10 chr4 8790847 8791148 -193537199 + LTR24C LTR ERV1 1 321 -314 430 317 158 19 chr4 8791154 8791476 -193536871 + MLT1K LTR MaLR 110 476 -112 437 146 10 87 chr4 8791501 8791604 -193536743 + MER4D LTR ERV1 1 95 -808 207 0 0 0 chr4 8791704 8791727 -193536620 + (A)n Simple_repeat Simple_repeat 1 23 0 1860 154 13 35 chr4 8791805 8792117 -193536230 + AluSx SINE Alu 5 309 -3 1019 175 82 39 chr4 8792290 8792422 -193535925 + AluJo SINE Alu 1 147 -165 2369 113 0 0 chr4 8792422 8792733 -193535614 + AluSx SINE Alu 1 311 -1 1019 175 82 39 chr4 8792733 8792806 -193535541 + AluJo SINE Alu 147 215 -97 284 367 11 0 chr4 8792806 8792896 -193535451 - LTR16C LTR ERVL -287 204 114 224 285 86 99 chr4 8793048 8793420 -193534927 + L2 LINE L2 2858 3224 -48 2494 137 23 44 chr4 8793440 8793913 -193534434 - LTR24 LTR ERV1 0 467 5 266 247 206 16 chr4 8793962 8794156 -193534191 - L2 LINE L2 -235 3037 2807 2436 94 3 0 chr4 8795208 8795516 -193532831 + AluSx SINE Alu 1 309 -3 1326 209 38 59 chr4 8795574 8795947 -193532400 + MER47A DNA MER2_type 1 365 -1 441 230 27 61 chr4 8795952 8796100 -193532247 - L2 LINE L2 -18 3295 3153 2287 77 38 0 chr4 8797736 8798023 -193530324 + AluSc SINE Alu 1 298 -11 1775 176 6 38 chr4 8798594 8798912 -193529435 + AluJo SINE Alu 1 308 -4 1404 208 32 45 chr4 8799159 8799368 -193528979 - MLT1A2 LTR MaLR 0 374 171 2190 111 42 0 chr4 8799368 8799657 -193528690 - AluSc SINE Alu -8 301 1 1404 208 32 45 chr4 8799657 8799826 -193528521 - MLT1A2 LTR MaLR -203 171 1 210 254 0 17 chr4 8800096 8800155 -193528192 + MIR3 SINE MIR 123 180 -28 1575 199 95 34 chr4 8800533 8801057 -193527290 + MER89 LTR ERV1 1 556 -3 1023 121 0 0 chr4 8801323 8801455 -193526892 + AluSp SINE Alu 1 132 -181 2033 111 7 0 chr4 8801457 8801728 -193526619 + AluSp SINE Alu 1 273 -40 2002 95 0 0 chr4 8801828 8802071 -193526276 - AluSq SINE Alu -70 243 1 189 107 0 0 chr4 8802126 8802154 -193526193 + (TCC)n Simple_repeat Simple_repeat 2 29 0 854 296 21 8 chr4 8802170 8802413 -193525934 - MIR SINE MIR -6 256 11 275 337 32 4 chr4 8802501 8802624 -193525723 - MIR SINE MIR -65 143 20 1886 117 29 42 chr4 8802768 8803077 -193525270 - AluSx SINE Alu -7 305 1 531 69 0 0 chr4 8803132 8803204 -193525143 + (TGGA)n Simple_repeat Simple_repeat 1 72 0 217 299 26 26 chr4 8803264 8803341 -193525006 - MIR3 SINE MIR -31 177 101 2108 128 42 31 chr4 8803779 8804139 -193524208 - THE1B LTR MaLR 0 364 1 192 294 86 64 chr4 8805353 8805540 -193522807 - L2 LINE L2 -1262 2052 1862 225 263 0 18 chr4 8805735 8805792 -193522555 + GA-rich Low_complexity Low_complexity 1 56 0 365 314 190 0 chr4 8805878 8806104 -193522243 - L2 LINE L2 0 3313 3045 342 323 56 45 chr4 8806258 8806524 -193521823 - L2 LINE L2 -15 3257 2989 1973 128 6 38 chr4 8806547 8806866 -193521481 + AluSx SINE Alu 1 309 -3 324 308 121 5 chr4 8806869 8807062 -193521285 - MIR SINE MIR -11 251 34 687 177 18 0 chr4 8807238 8807402 -193520945 + (TCCA)n Simple_repeat Simple_repeat 1 167 0 383 176 24 0 chr4 8807467 8807552 -193520795 + (TCCA)n Simple_repeat Simple_repeat 4 90 0 209 270 16 0 chr4 8807587 8807650 -193520697 + (TCCA)n Simple_repeat Simple_repeat 2 65 0 318 325 53 18 chr4 8807682 8807796 -193520551 - L2 LINE L2 -22 3250 3133 180 343 0 14 chr4 8807871 8807941 -193520406 - L2 LINE L2 -3 3269 3201 2392 106 0 3 chr4 8807941 8808252 -193520095 - AluSx SINE Alu -2 310 1 231 183 267 0 chr4 8808304 8808364 -193519983 - MIR SINE MIR -62 146 71 189 147 0 0 chr4 8809178 8809212 -193519135 + (GGGAGA)n Simple_repeat Simple_repeat 3 36 0 180 125 0 0 chr4 8809213 8809245 -193519102 + (TG)n Simple_repeat Simple_repeat 1 32 0 266 274 65 40 chr4 8809318 8809442 -193518905 + L2 LINE L2 3187 3313 0 257 196 0 54 chr4 8809584 8809645 -193518702 + polypyrimidine Low_complexity Low_complexity 1 57 0 2326 109 7 0 chr4 8809645 8809949 -193518398 - AluSx SINE Alu -6 306 1 24 0 0 0 chr4 8810588 8810612 -193517735 + AT_rich Low_complexity Low_complexity 1 24 0 2484 83 3 10 chr4 8810758 8811072 -193517275 - AluSx SINE Alu 0 312 1 1912 134 28 3 chr4 8812009 8812316 -193516031 - AluSx SINE Alu 0 314 1 995 74 0 0 chr4 8812502 8812623 -193515724 + AluSc SINE Alu 175 295 -14 274 315 0 0 chr4 8812975 8813048 -193515299 + MIR3 SINE MIR 104 176 -32 253 200 33 33 chr4 8813536 8813596 -193514751 - MIR SINE MIR -67 141 82 1985 144 3 19 chr4 8815459 8815772 -193512575 - AluJb SINE Alu -4 308 1 368 274 96 7 chr4 8817300 8817435 -193510912 - L1MC/D LINE L1 -2211 5597 5451 2348 99 0 3 chr4 8817451 8817754 -193510593 + AluSx SINE Alu 1 302 -10 216 373 27 18 chr4 8817757 8817886 -193510461 - MIR SINE MIR -61 147 20 239 206 14 14 chr4 8817914 8817987 -193510360 + (TA)n Simple_repeat Simple_repeat 1 73 0 4638 67 18 6 chr4 8818671 8819301 -193509046 + L1PA10 LINE L1 5532 6168 0 286 262 49 31 chr4 8819326 8819528 -193508819 - ALR/Alpha Satellite centromeric 0 205 1 208 340 57 0 chr4 8820895 8821001 -193507346 + MIR SINE MIR 33 144 -64 279 310 90 7 chr4 8821511 8821666 -193506681 - L1ME4a LINE L1 -108 6013 5846 405 331 17 29 chr4 8821730 8821905 -193506442 - MIR SINE MIR -4 258 86 25 51 0 0 chr4 8823009 8823048 -193505299 + AT_rich Low_complexity Low_complexity 1 39 0 319 253 50 104 chr4 8823208 8823390 -193504957 - MIR SINE MIR -74 188 17 436 246 90 0 chr4 8823441 8823563 -193504784 - FLAM_A SINE Alu 0 133 1 544 126 39 19 chr4 8823564 8823667 -193504680 + L1M2 LINE L1 5337 5441 -856 2235 89 0 0 chr4 8823780 8824050 -193504297 - AluY SINE Alu -39 272 3 1737 155 73 9 chr4 8824055 8824396 -193503951 + MER4D LTR ERV1 541 903 0 266 224 92 13 chr4 8824396 8824458 -193503889 + MLT1K LTR MaLR 505 572 -16 190 0 0 0 chr4 8825511 8825532 -193502815 + (TTA)n Simple_repeat Simple_repeat 2 180 0 2164 96 11 0 chr4 8825532 8825812 -193502535 - AluSx SINE Alu -29 283 1 197 260 55 14 chr4 8829104 8829177 -193499170 - MIR3 SINE MIR -23 185 110 422 209 228 0 chr4 8829252 8829410 -193498937 + MER96B DNA MER1_type? 224 417 0 2099 112 7 0 chr4 8829484 8829780 -193498567 - AluSx SINE Alu -14 298 1 1656 175 20 3 chr4 8829790 8830087 -193498260 - AluJo SINE Alu -10 302 1 456 153 0 14 chr4 8830114 8830186 -193498161 - FLAM_A SINE Alu -25 117 47 776 199 0 6 chr4 8830625 8830806 -193497541 + CT-rich Low_complexity Low_complexity 1 180 0 1885 251 82 28 chr4 8830963 8831631 -193496716 - L1MC3 LINE L1 -190 7595 6892 210 219 62 0 chr4 8832451 8832515 -193495832 + MIR SINE MIR 65 132 -76 2194 96 6 13 chr4 8832638 8832951 -193495396 - AluSx SINE Alu -1 311 1 1576 194 20 0 chr4 8833724 8834023 -193494324 - AluJo SINE Alu -5 307 3 655 250 66 5 chr4 8834391 8834587 -193493760 - MLT1B LTR MaLR 0 390 183 517 219 52 24 chr4 8834742 8834920 -193493427 - MLT1B LTR MaLR -196 178 1 843 183 0 0 chr4 8836105 8836473 -193491874 + (CTCA)n Simple_repeat Simple_repeat 1 368 0 234 105 0 0 chr4 8837324 8837362 -193490985 + (A)n Simple_repeat Simple_repeat 1 38 0 604 288 59 5 chr4 8839301 8839476 -193488871 + MIR SINE MIR 13 204 -58 2211 80 3 10 chr4 8839476 8839776 -193488571 - AluSx SINE Alu -14 298 1 604 288 59 5 chr4 8839776 8839819 -193488528 + MIR SINE MIR 204 243 -19 256 111 37 74 chr4 8841988 8842096 -193486251 + (TGGG)n Simple_repeat Simple_repeat 3 106 0 338 350 97 14 chr4 8843551 8843768 -193484579 + MIR SINE MIR 16 250 -12 284 207 0 11 chr4 8843782 8843869 -193484478 + (CA)n Simple_repeat Simple_repeat 2 87 0 892 257 20 76 chr4 8843870 8844224 -193484123 + MER2 DNA MER2_type 5 338 -7 394 222 8 8 chr4 8844239 8844356 -193483991 + (CA)n Simple_repeat Simple_repeat 2 118 0 335 309 11 17 chr4 8844438 8844619 -193483728 + (CA)n Simple_repeat Simple_repeat 1 180 0 214 292 115 15 chr4 8845509 8845639 -193482708 + L2 LINE L2 3169 3311 -2 1939 122 0 0 chr4 8846000 8846278 -193482069 - AluSx SINE Alu -17 295 18 987 189 25 5 chr4 8846423 8846624 -193481723 - MER46A DNA MER2_type 0 236 32 284 356 110 0 chr4 8846669 8846815 -193481532 + MIR3 SINE MIR 30 191 -17 1981 99 67 0 chr4 8847204 8847486 -193480861 - AluSq SINE Alu -12 301 1 253 348 22 23 chr4 8847872 8848076 -193480271 - MIR3 SINE MIR -56 206 6 1642 148 25 18 chr4 8849217 8849531 -193478816 + AluJo SINE Alu 1 316 0 521 227 111 29 chr4 8849578 8849750 -193478597 + MIR SINE MIR 74 259 -3 2094 124 3 0 chr4 8850521 8850827 -193477520 - AluSx SINE Alu -5 307 1 262 134 239 15 chr4 8850975 8851042 -193477305 + L2 LINE L2 3232 3313 0 206 351 99 13 chr4 8853203 8853354 -193474993 - MIR3 SINE MIR -6 202 39 1847 145 41 0 chr4 8854220 8854510 -193473837 - AluSx SINE Alu -9 303 2 366 291 114 50 chr4 8854607 8855088 -193473259 - L2 LINE L2 -813 2501 1990 807 185 0 0 chr4 8855092 8855222 -193473125 + FLAM_C SINE Alu 1 130 -3 180 213 43 43 chr4 8855236 8855283 -193473064 - L2 LINE L2 -346 2967 2921 2239 74 0 17 chr4 8855423 8855721 -193472626 - AluSx SINE Alu -19 293 1 39 60 0 0 chr4 8856097 8856164 -193472183 + GC_rich Low_complexity Low_complexity 1 67 0 28 0 0 0 chr4 8856257 8856285 -193472062 + GC_rich Low_complexity Low_complexity 1 28 0 28 0 0 0 chr4 8857152 8857180 -193471167 + GC_rich Low_complexity Low_complexity 1 28 0 2262 93 0 0 chr4 8858255 8858556 -193469791 + AluSx SINE Alu 1 301 -11 211 281 85 0 chr4 8858605 8858687 -193469660 + MIR3 SINE MIR 113 201 -7 2184 111 0 0 chr4 8859161 8859459 -193468888 + AluY SINE Alu 1 298 -13 860 195 5 56 chr4 8859542 8859737 -193468610 + FRAM SINE Alu 1 176 0 332 231 0 100 chr4 8860710 8860840 -193467507 + MIR SINE MIR 90 205 -57 189 341 121 0 chr4 8861451 8861542 -193466805 - L2 LINE L2 -13 3259 3158 758 232 211 10 chr4 8862066 8862355 -193465992 - MLT1E LTR MaLR 0 593 247 583 118 0 32 chr4 8862449 8862542 -193465805 - AluSg/x SINE Alu -13 297 208 2142 109 0 0 chr4 8862699 8862992 -193465355 - AluSg SINE Alu -9 301 9 2240 71 14 3 chr4 8863583 8863879 -193464468 + AluY SINE Alu 1 299 -12 1449 182 41 10 chr4 8864059 8864350 -193463997 + AluJo SINE Alu 3 302 -10 438 286 26 32 chr4 8864413 8864567 -193463780 - HAL1 LINE L1 -2 2505 2353 1841 145 7 3 chr4 8864690 8864979 -193463368 + AluSx SINE Alu 1 290 -22 334 208 65 0 chr4 8865013 8865090 -193463257 + MER21B LTR ERV1 16 97 -766 1740 233 32 68 chr4 8865096 8865594 -193462753 + MER21B LTR ERV1 19 498 -365 445 261 200 11 chr4 8865594 8865774 -193462573 - MIR SINE MIR -45 217 4 309 248 132 33 chr4 8866788 8866909 -193461438 + MIR SINE MIR 14 146 -116 2305 89 0 0 chr4 8867054 8867356 -193460991 + AluSg SINE Alu 1 302 -8 886 131 0 0 chr4 8868075 8868197 -193460150 - FLAM_C SINE Alu -11 122 1 745 271 114 0 chr4 8868248 8868458 -193459889 - MIR SINE MIR -18 244 11 1851 114 4 0 chr4 8868733 8869004 -193459343 + AluSx SINE Alu 30 301 -11 330 244 167 0 chr4 8869994 8870084 -193458263 + L2 LINE L2 3168 3272 0 358 313 42 14 chr4 8870221 8870365 -193457982 + L2 LINE L2 3125 3272 0 213 152 0 0 chr4 8870369 8870402 -193457945 - L2 LINE L2 -8 3305 3273 196 268 49 37 chr4 8872278 8872360 -193455987 - MIR3 SINE MIR -111 97 15 532 315 82 0 chr4 8873582 8873766 -193454581 + MER58A DNA MER1_type 23 221 -3 2221 132 3 0 chr4 8874406 8874717 -193453630 - AluSx SINE Alu 0 312 1 362 272 26 9 chr4 8874863 8874977 -193453370 - MIR SINE MIR -119 143 28 347 214 71 20 chr4 8876481 8876579 -193451768 + MIR SINE MIR 100 202 -60 630 157 21 0 chr4 8877055 8877195 -193451152 + (TCCA)n Simple_repeat Simple_repeat 3 145 0 2457 81 3 0 chr4 8877724 8878021 -193450326 - AluSx SINE Alu -14 298 1 372 333 154 5 chr4 8878021 8878216 -193450131 - MIR SINE MIR -16 246 23 336 271 201 7 chr4 8878415 8878559 -193449788 - MIR SINE MIR -71 191 20 562 333 131 47 chr4 8878578 8878771 -193449576 - L1MDb LINE L1 -3371 3035 2860 1856 144 23 26 chr4 8878771 8879077 -193449270 - AluSx SINE Alu -7 305 1 562 333 131 47 chr4 8879077 8879462 -193448885 - L1MDb LINE L1 -3546 2860 2408 192 237 34 34 chr4 8879615 8879674 -193448673 - L2 LINE L2 -1 3312 3254 1902 122 56 4 chr4 8879910 8880180 -193448167 - AluSx SINE Alu -24 288 5 207 0 0 0 chr4 8880196 8880219 -193448128 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 194 213 64 0 chr4 8882921 8882968 -193445379 - MIR3 SINE MIR -47 161 112 1969 145 24 0 chr4 8883100 8883396 -193444951 + AluJo SINE Alu 1 303 -9 308 272 144 30 chr4 8883411 8883613 -193444734 + MER102a DNA MER1_type 98 322 -8 5945 0 0 0 chr4 8883797 8884474 -193443873 - L1HS LINE L1 0 6155 5479 2481 12 0 0 chr4 8884469 8884873 -193443474 + L1P1 LINE L1 5086 5489 -666 * 334 252 37 30 chr4 8885571 8885706 -193442641 - MIR3 SINE MIR -43 165 30 755 234 12 0 chr4 8885824 8885991 -193442356 + MER5A DNA MER1_type 3 171 -18 2475 212 70 107 chr4 8886124 8886760 -193441587 - L1MDb LINE L1 -4233 2173 1515 2330 107 0 13 chr4 8886760 8887069 -193441278 - AluSc SINE Alu -4 305 1 2475 212 70 107 chr4 8887069 8887571 -193440776 - L1MDb LINE L1 -4891 1515 1030 2330 92 3 16 chr4 8887571 8887885 -193440462 - AluSp SINE Alu -3 310 1 2475 212 70 107 chr4 8887885 8888245 -193440102 - L1MDb LINE L1 -5376 1030 658 213 225 62 25 chr4 8888682 8888762 -193439585 + MER5B DNA MER1_type 96 178 0 2238 99 27 0 chr4 8888763 8889057 -193439290 - AluSp SINE Alu -11 302 1 392 308 20 41 chr4 8889137 8889283 -193439064 - MIR3 SINE MIR -63 145 3 303 214 80 45 chr4 8890081 8890193 -193438154 - MIR SINE MIR -112 150 35 190 83 139 0 chr4 8890202 8890238 -193438109 - MIR SINE MIR -165 97 57 217 196 22 0 chr4 8891677 8891723 -193436624 + (TA)n Simple_repeat Simple_repeat 2 48 0 330 248 0 99 chr4 8891723 8891824 -193436523 - L1MC4 LINE L1 -1339 6703 6613 340 158 12 12 chr4 8891839 8891921 -193436426 + (CA)n Simple_repeat Simple_repeat 2 83 0 684 201 66 1 chr4 8892077 8892248 -193436099 - L1MD2 LINE L1 0 8042 6255 628 268 128 22 chr4 8892262 8892305 -193436042 - L2 LINE L2 -640 2674 2637 2191 112 10 3 chr4 8892305 8892601 -193435746 - AluSq SINE Alu -13 300 3 628 268 128 22 chr4 8892601 8892870 -193435477 - L2 LINE L2 -677 2637 2329 2153 111 3 49 chr4 8892897 8893221 -193435126 + AluSx SINE Alu 3 311 -1 253 253 325 6 chr4 8893581 8893747 -193434600 - L2 LINE L2 -1015 2299 2081 259 245 138 13 chr4 8894139 8894298 -193434049 - L2 LINE L2 -1370 1944 1766 2202 87 37 10 chr4 8894522 8894821 -193433526 + AluSp SINE Alu 1 307 -6 181 270 72 63 chr4 8895149 8895260 -193433087 - MIR SINE MIR -3 259 148 220 306 162 51 chr4 8895307 8895523 -193432824 - MIR SINE MIR -1 261 22 791 234 57 0 chr4 8896312 8896504 -193431843 - MER58A DNA MER1_type 0 224 22 335 216 62 0 chr4 8896859 8896956 -193431391 + MER5A DNA MER1_type 7 109 -80 2618 53 0 3 chr4 8897077 8897379 -193430968 - AluY SINE Alu -10 301 1 2228 114 0 19 chr4 8898596 8898913 -193429434 - AluSq SINE Alu -2 311 1 207 0 0 0 chr4 8898913 8898936 -193429411 + (T)n Simple_repeat Simple_repeat 1 23 0 2018 229 118 53 chr4 8899347 8900972 -193427375 - L1ME1 LINE L1 -108 6058 4345 304 159 43 0 chr4 8900988 8901057 -193427290 - L1MA10 LINE L1 -7 6327 6256 2095 84 32 21 chr4 8901111 8901395 -193426952 - AluSc SINE Alu -2 307 21 1128 238 165 36 chr4 8901452 8901594 -193426753 - L1ME1 LINE L1 -2273 3873 3751 2245 121 0 3 chr4 8901594 8901899 -193426448 + AluSx SINE Alu 4 307 -5 1128 238 165 36 chr4 8901899 8902277 -193426070 - L1ME1 LINE L1 -2395 3751 3286 2231 119 0 0 chr4 8902556 8902851 -193425496 + AluSx SINE Alu 1 295 -17 267 330 0 29 chr4 8904415 8904518 -193423829 - MIR SINE MIR -82 180 81 261 278 93 117 chr4 8905032 8905475 -193422872 - L2 LINE L2 -4 3268 2837 198 0 0 0 chr4 8906512 8906534 -193421813 + (T)n Simple_repeat Simple_repeat 1 22 0 183 247 186 31 chr4 8906603 8906700 -193421647 - L2 LINE L2 -20 3252 3141 2387 113 0 0 chr4 8906966 8907277 -193421070 + AluSx SINE Alu 1 311 -1 220 229 29 43 chr4 8908078 8908148 -193420199 + MIR SINE MIR 33 101 -107 2415 86 0 7 chr4 8908258 8908559 -193419788 + AluY SINE Alu 1 299 -12 231 114 0 0 chr4 8908602 8908637 -193419710 + (CAA)n Simple_repeat Simple_repeat 1 35 0 3218 166 54 26 chr4 8908693 8909196 -193419151 + MER39 LTR ERV1 1 489 -218 2262 109 7 0 chr4 8909196 8909499 -193418848 + AluSp SINE Alu 1 305 -8 2015 150 0 3 chr4 8909506 8909806 -193418541 + AluJo SINE Alu 1 299 -13 3218 166 54 26 chr4 8909806 8909982 -193418365 + MER39 LTR ERV1 494 707 0 1501 200 67 9 chr4 8910042 8910372 -193417975 + MLT1B LTR MaLR 1 349 -41 207 188 0 0 chr4 8911086 8911134 -193417213 + (TA)n Simple_repeat Simple_repeat 1 48 0 237 33 0 0 chr4 8911275 8911305 -193417042 + (CA)n Simple_repeat Simple_repeat 1 30 0 198 0 0 0 chr4 8911308 8911330 -193417017 + (TC)n Simple_repeat Simple_repeat 1 22 0 2303 75 7 0 chr4 8912007 8912323 -193416024 + AluSg SINE Alu 1 318 0 1370 187 133 3 chr4 8913323 8913655 -193414692 + MLT1B LTR MaLR 5 379 -11 465 66 0 0 chr4 8913992 8914053 -193414294 + (TCC)n Simple_repeat Simple_repeat 2 62 0 359 244 27 54 chr4 8915082 8915233 -193413114 - MIR SINE MIR -44 164 10 345 313 62 35 chr4 8915681 8915908 -193412439 + L2 LINE L2 3034 3266 -6 3033 126 43 32 chr4 8916028 8916367 -193411980 + MER4B LTR ERV1 1 335 -444 2121 134 3 0 chr4 8916367 8916666 -193411681 - AluSx SINE Alu -12 300 1 3033 126 43 32 chr4 8916666 8916925 -193411422 + MER4B LTR ERV1 335 779 0 3452 125 81 23 chr4 8917873 8917905 -193410442 + LTR9B LTR ERV1 1 30 -614 2296 95 0 52 chr4 8917905 8918231 -193410116 + AluSc SINE Alu 1 309 0 3452 125 81 23 chr4 8918231 8918807 -193409540 + LTR9B LTR ERV1 30 644 0 448 113 0 38 chr4 8919709 8919789 -193408558 + MER4A LTR ERV1 22 98 -566 1697 117 3 80 chr4 8919789 8920149 -193408198 + MER4A LTR ERV1 261 664 0 1206 237 118 9 chr4 8920288 8920626 -193407721 + MSTD LTR MaLR 14 388 -8 185 299 115 60 chr4 8921014 8921231 -193407116 - L2 LINE L2 -24 3248 3020 189 253 131 40 chr4 8922186 8922285 -193406062 + L2 LINE L2 3164 3271 -1 23 0 0 0 chr4 8922429 8922452 -193405895 + AT_rich Low_complexity Low_complexity 1 23 0 1118 137 0 0 chr4 8922469 8922622 -193405725 + AluSq SINE Alu 1 153 -160 2088 144 43 0 chr4 8922815 8923114 -193405233 - AluSx SINE Alu 0 312 1 286 281 162 12 chr4 8923193 8923389 -193404958 - L1ME LINE L1 -477 5644 5422 867 212 100 111 chr4 8924391 8924843 -193403504 + MER31B LTR ERV1 20 466 0 1708 218 48 88 chr4 8924935 8925347 -193403000 + MER34C LTR ERV1 1 381 -204 2170 103 0 31 chr4 8925347 8925666 -193402681 + AluSx SINE Alu 1 309 -3 1708 218 48 88 chr4 8925666 8925863 -193402484 + MER34C LTR ERV1 381 585 0 239 193 18 35 chr4 8927116 8927173 -193401174 + G-rich Low_complexity Low_complexity 1 56 0 245 301 155 29 chr4 8927783 8928022 -193400325 + L2 LINE L2 2913 3181 -91 2327 60 3 17 chr4 8928165 8928467 -193399880 - AluY SINE Alu -13 298 1 2265 82 0 7 chr4 8928801 8929093 -193399254 - AluSc SINE Alu -19 290 1 545 270 103 0 chr4 8929171 8929356 -193398991 - MIR SINE MIR -50 212 9 1041 222 31 38 chr4 8929591 8929983 -193398364 + LTR10B LTR ERV1 214 505 0 1285 194 150 19 chr4 8929983 8930344 -193398003 + MSTC LTR MaLR 21 428 0 494 274 203 0 chr4 8930368 8930634 -193397713 + L1ME3A LINE L1 5841 6160 -10 300 167 0 0 chr4 8930638 8930686 -193397661 + L1MB5 LINE L1 5004 5051 -1095 1693 176 0 7 chr4 8930696 8930980 -193397367 + AluJo SINE Alu 1 282 -30 1436 209 20 22 chr4 8930993 8931351 -193396996 + L1MB5 LINE L1 5315 5671 -509 2038 139 17 0 chr4 8931370 8931672 -193396675 + AluSx SINE Alu 1 307 -5 331 208 0 0 chr4 8931678 8931750 -193396597 + G-rich Low_complexity Low_complexity 3 74 0 747 101 0 0 chr4 8931758 8931857 -193396490 + AluY SINE Alu 10 108 -203 926 66 0 0 chr4 8931959 8932081 -193396266 + AluY SINE Alu 173 294 -17 771 112 0 0 chr4 8932081 8932197 -193396150 + (GGAA)n Simple_repeat Simple_repeat 3 118 0 2023 209 48 6 chr4 8932203 8932686 -193395661 + L1MB5 LINE L1 5672 6174 0 569 329 42 19 chr4 8932700 8932916 -193395431 - MIR SINE MIR -3 259 39 180 317 79 10 chr4 8933510 8933611 -193394736 + MIR SINE MIR 42 149 -59 222 205 26 13 chr4 8935313 8935469 -193392878 + (TG)n Simple_repeat Simple_repeat 2 159 0 420 237 28 11 chr4 8935543 8935720 -193392627 + (TG)n Simple_repeat Simple_repeat 1 180 0 406 203 10 29 chr4 8935773 8936090 -193392257 + (TG)n Simple_repeat Simple_repeat 1 311 0 201 348 22 0 chr4 8936502 8936594 -193391753 + GA-rich Low_complexity Low_complexity 2 95 0 328 287 22 52 chr4 8939485 8939568 -193388779 + L1MC/D LINE L1 5303 5382 -2426 2172 135 3 0 chr4 8939568 8939880 -193388467 + AluSq SINE Alu 1 313 0 328 287 22 52 chr4 8939880 8939932 -193388415 + L1MC/D LINE L1 5382 5434 -2374 1201 203 13 4 chr4 8939935 8940167 -193388180 + AluJo SINE Alu 2 235 -77 1401 88 0 0 chr4 8940271 8940452 -193387895 + AluSg/x SINE Alu 130 310 -2 463 222 153 11 chr4 8940455 8940644 -193387703 + LTR48B LTR ERV1 429 644 0 1993 83 0 76 chr4 8941147 8941472 -193386875 + AluSc SINE Alu 1 302 0 187 319 43 29 chr4 8942092 8942161 -193386186 - L3b LINE CR1 -51 1532 1463 454 255 50 37 chr4 8942169 8942330 -193386017 + MIR SINE MIR 21 183 -79 1760 220 69 21 chr4 8942333 8942756 -193385591 + LTR47B LTR ERVL 1 443 0 1876 143 6 13 chr4 8943031 8943345 -193385002 + AluSx SINE Alu 1 312 0 2107 129 0 3 chr4 8943493 8943796 -193384551 + AluSq SINE Alu 1 302 -11 2521 62 0 0 chr4 8943796 8944101 -193384246 + AluY SINE Alu 1 305 -6 191 344 32 0 chr4 8944619 8944712 -193383635 + L3 LINE CR1 1131 1226 -351 354 288 104 8 chr4 8944790 8944915 -193383432 + MLT1I LTR MaLR 68 204 -205 192 253 172 11 chr4 8945184 8945271 -193383076 + L2 LINE L2 3168 3268 -4 634 257 183 0 chr4 8945385 8945560 -193382787 - MER3 DNA MER1_type 0 209 3 2028 110 13 7 chr4 8945749 8946059 -193382288 + AluSx SINE Alu 1 312 0 340 338 32 32 chr4 8946308 8946524 -193381823 + L2 LINE L2 2841 3056 -257 298 286 80 9 chr4 8948791 8948903 -193379444 - MIR SINE MIR -55 153 34 201 325 36 0 chr4 8949295 8949378 -193378969 + MIR SINE MIR 98 183 -79 2053 241 13 53 chr4 8949790 8950396 -193377951 + L1MB5 LINE L1 5557 6138 -36 2098 109 31 0 chr4 8950400 8950694 -193377653 + AluSx SINE Alu 1 303 -9 1875 148 0 4 chr4 8950717 8951015 -193377332 + AluJb SINE Alu 5 301 0 351 0 0 0 chr4 8951272 8951311 -193377036 + (CA)n Simple_repeat Simple_repeat 2 40 0 423 237 0 0 chr4 8953039 8953132 -193375215 - MIR SINE MIR -133 129 37 250 335 150 21 chr4 8953869 8954102 -193374245 + L2 LINE L2 2968 3230 -42 333 0 0 0 chr4 8954617 8954654 -193373693 + (TG)n Simple_repeat Simple_repeat 2 38 0 339 317 55 23 chr4 8954654 8954770 -193373577 - L2 LINE L2 -285 2987 2876 2088 133 26 0 chr4 8954770 8955072 -193373275 + AluSg SINE Alu 1 310 0 339 317 55 23 chr4 8955072 8955174 -193373173 - L2 LINE L2 -396 2876 2755 1432 233 36 3 chr4 8955350 8955685 -193372662 + MLT2C1 LTR ERVL 1 346 -51 909 174 0 0 chr4 8955715 8955955 -193372392 + (TCCA)n Simple_repeat Simple_repeat 1 240 0 260 286 12 0 chr4 8957325 8957409 -193370938 - L1ME3A LINE L1 -70 6100 6016 189 264 18 73 chr4 8957600 8957710 -193370637 - L2 LINE L2 -220 3052 2949 247 294 39 59 chr4 8958048 8958150 -193370197 - MIR SINE MIR -71 191 92 533 170 18 0 chr4 8958824 8958937 -193369410 + MIR SINE MIR 37 157 -61 696 250 58 10 chr4 8959723 8959931 -193368416 - L1MD2 LINE L1 -4 6355 6138 186 133 0 0 chr4 8959931 8959961 -193368386 + (CGTG)n Simple_repeat Simple_repeat 3 32 0 446 271 7 0 chr4 8962099 8962243 -193366104 + (TG)n Simple_repeat Simple_repeat 2 146 0 255 369 87 0 chr4 8962399 8962594 -193365753 + MIR SINE MIR 20 231 -31 189 0 0 0 chr4 8962920 8962941 -193365406 + (TGAA)n Simple_repeat Simple_repeat 2 22 0 698 204 115 5 chr4 8963120 8963311 -193365036 + MER20 DNA MER1_type 1 212 -7 264 220 110 0 chr4 8963383 8963474 -193364873 + MIR SINE MIR 21 121 -141 2044 122 24 0 chr4 8966528 8966823 -193361524 - AluSx SINE Alu -10 302 1 349 288 176 7 chr4 8968611 8968764 -193359583 + MIR SINE MIR 58 236 -26 459 286 51 60 chr4 8968871 8969105 -193359242 - MIR SINE MIR -17 245 14 702 172 7 7 chr4 8969171 8969322 -193359025 - MER96B DNA MER1_type? -238 179 29 2091 122 7 0 chr4 8969631 8969934 -193358413 + AluSx SINE Alu 1 305 -7 212 167 0 0 chr4 8970002 8970038 -193358309 + (TGAA)n Simple_repeat Simple_repeat 1 36 0 270 304 76 0 chr4 8970474 8970566 -193357781 + MIR SINE MIR 77 175 -87 1575 288 34 58 chr4 8970688 8970884 -193357463 - L1ME1 LINE L1 -67 6099 5900 23 0 0 0 chr4 8970884 8970907 -193357440 + AT_rich Low_complexity Low_complexity 1 23 0 1575 288 34 58 chr4 8970907 8971449 -193356898 - L1ME1 LINE L1 -266 5900 5357 549 86 74 0 chr4 8971449 8971612 -193356735 + (TA)n Simple_repeat Simple_repeat 1 175 0 423 282 60 58 chr4 8971451 8971853 -193356494 + L1MCa LINE L1 1907 6392 -9 * 195 81 14 68 chr4 8971866 8971940 -193356407 + (TTATA)n Simple_repeat Simple_repeat 5 74 0 21 0 0 0 chr4 8971951 8971972 -193356375 + AT_rich Low_complexity Low_complexity 1 21 0 390 129 31 37 chr4 8971976 8972139 -193356208 + (TATAA)n Simple_repeat Simple_repeat 3 164 0 217 64 85 0 chr4 8972141 8972188 -193356159 + (TA)n Simple_repeat Simple_repeat 2 52 0 2105 118 0 0 chr4 8972188 8972476 -193355871 - AluSx SINE Alu -24 288 1 335 200 21 129 chr4 8972476 8972501 -193355846 - L1ME1 LINE L1 -776 5370 5344 703 227 72 139 chr4 8972501 8972999 -193355348 + MER4C LTR ERV1 1 465 0 335 200 21 129 chr4 8972999 8973026 -193355321 - L1ME1 LINE L1 -802 5344 5316 2116 100 0 17 chr4 8973026 8973327 -193355020 - AluSx SINE Alu -16 296 1 335 200 21 129 chr4 8973327 8973413 -193354934 - L1ME1 LINE L1 -830 5316 5246 356 278 48 8 chr4 8973506 8973632 -193354715 - L1MEc LINE L1 -4639 1757 1627 * 631 191 112 7 chr4 8973627 8973779 -193354568 - L1MB8 LINE L1 0 6178 6011 * 1453 284 94 6 chr4 8973777 8974479 -193353868 - L1MEc LINE L1 -4754 1642 879 2033 194 61 27 chr4 8974481 8974925 -193353422 - LTR2B LTR ERV1 0 490 32 358 115 0 16 chr4 8975001 8975062 -193353285 + MADE1 DNA Mariner 21 80 0 252 56 0 28 chr4 8975075 8975111 -193353236 + (TCCC)n Simple_repeat Simple_repeat 2 36 0 1797 178 10 0 chr4 8975111 8975582 -193352765 - AluJo SINE Alu 0 474 1 626 285 95 87 chr4 8975589 8975744 -193352603 - L1MEc LINE L1 -5578 818 666 707 154 8 0 chr4 8975744 8975861 -193352486 - FLAM_C SINE Alu -15 118 1 626 285 95 87 chr4 8975861 8976498 -193351849 - L1MEc LINE L1 -5730 666 20 188 139 0 47 chr4 8977183 8977226 -193351121 + (GGGA)n Simple_repeat Simple_repeat 1 41 0 200 300 71 0 chr4 8977867 8977937 -193350410 - L2 LINE L2 -25 3288 3214 712 236 16 6 chr4 8978459 8978641 -193349706 - Charlie2 DNA MER1_type -38 2824 2641 213 278 48 2 chr4 9029370 9029433 -193298914 - MIR SINE MIR -110 98 37 182 214 0 24 chr4 9029643 9029685 -193298662 - MIR SINE MIR -111 151 111 1606 144 90 7 chr4 9029904 9030182 -193298165 + AluJo SINE Alu 2 302 -10 805 261 105 30 chr4 9030248 9030690 -193297657 + MLT1C LTR MaLR 1 498 -7 192 163 0 0 chr4 9030776 9030819 -193297528 + (TG)n Simple_repeat Simple_repeat 2 44 0 2052 125 0 0 chr4 9030988 9031276 -193297071 + AluSg1 SINE Alu 1 288 -21 1640 250 77 30 chr4 9031358 9032062 -193296285 + L1MD2 LINE L1 5543 6228 -14 509 274 126 0 chr4 9032081 9032296 -193296051 - LTR33A LTR ERVL -22 501 260 1785 104 75 35 chr4 9032298 9032643 -193295704 - THE1B LTR MaLR 0 364 6 782 304 28 30 chr4 9033840 9034202 -193294145 + ERVL LTR ERVL 4873 5233 -531 194 214 0 0 chr4 9034432 9034474 -193293873 - L2 LINE L2 -1 3312 3271 873 225 149 0 chr4 9034759 9035088 -193293259 + MLT1D LTR MaLR 3 380 -125 395 321 35 12 chr4 9035540 9035703 -193292644 - MIR SINE MIR -55 153 38 878 266 61 30 chr4 9036305 9036778 -193291569 - MLT1D LTR MaLR -17 488 1 347 320 23 0 chr4 9036925 9037053 -193291294 + L1ME LINE L1 5522 5652 -469 201 121 0 0 chr4 9038379 9038412 -193289935 + (A)n Simple_repeat Simple_repeat 1 33 0 448 250 0 10 chr4 9038495 9038599 -193289748 - MIR3 SINE MIR -46 162 60 236 307 130 12 chr4 9038888 9039049 -193289298 - MIR SINE MIR -44 218 33 521 198 173 12 chr4 9039154 9039316 -193289031 - MLT1F LTR MaLR -42 500 313 300 277 8 59 chr4 9039320 9039439 -193288908 - MIR SINE MIR -117 145 33 267 291 119 15 chr4 9039575 9039709 -193288638 - MIR3 SINE MIR -51 157 10 194 371 62 21 chr4 9039842 9040036 -193288311 + MIR SINE MIR 8 209 -53 357 316 59 33 chr4 9040811 9040963 -193287384 - L1ME4a LINE L1 -2 6119 5964 2295 100 0 3 chr4 9041752 9042061 -193286286 - AluSc SINE Alu -1 308 1 1931 145 27 0 chr4 9042125 9042422 -193285925 - AluJo SINE Alu -7 305 1 329 172 31 0 chr4 9043292 9043356 -193284991 + MIR SINE MIR 82 147 -61 361 346 31 31 chr4 9043847 9044006 -193284341 + MIR SINE MIR 20 178 -84 243 271 19 37 chr4 9044996 9045103 -193283244 - LTR16C LTR ERVL -41 450 346 206 361 81 68 chr4 9045559 9045880 -193282467 - L2 LINE L2 0 3272 2948 190 297 25 59 chr4 9047499 9047617 -193280730 - L2 LINE L2 -13 3259 3146 591 280 101 49 chr4 9047780 9048205 -193280142 - MLT1L LTR MaLR -27 588 142 239 194 15 60 chr4 9048385 9048452 -193279895 + MIR SINE MIR 46 109 -153 1039 253 210 16 chr4 9048471 9049121 -193279226 - L2 LINE L2 -6 3307 2507 2246 107 3 0 chr4 9050251 9050560 -193277787 - AluSp SINE Alu -3 310 1 695 269 18 6 chr4 9050561 9050732 -193277615 - MIR SINE MIR -66 196 24 426 327 40 10 chr4 9050735 9050934 -193277413 - L1ME LINE L1 -383 5738 5534 2398 87 0 0 chr4 9051150 9051461 -193276886 - AluY SINE Alu 0 311 1 275 321 80 18 chr4 9052502 9052776 -193275571 + L1M4 LINE L1 4112 4402 -1744 1218 25 25 0 chr4 9052789 9052947 -193275400 + MLT2A1 LTR ERVL 1 162 -282 479 335 60 20 chr4 9052949 9053043 -193275304 + L1M4 LINE L1 4966 5055 -1091 2302 103 3 0 chr4 9053043 9053353 -193274994 + AluSx SINE Alu 1 311 -1 479 335 60 20 chr4 9053353 9053509 -193274838 + L1M4 LINE L1 5055 5226 -920 1256 241 117 57 chr4 9053583 9053622 -193274725 - MLT2B1 LTR ERVL -1 519 484 315 0 0 0 chr4 9053622 9053657 -193274690 + (TA)n Simple_repeat Simple_repeat 1 35 0 * 369 43 0 0 chr4 9053656 9053703 -193274644 + (CA)n Simple_repeat Simple_repeat 2 48 0 1256 241 117 57 chr4 9053657 9054152 -193274195 - MLT2B1 LTR ERVL -36 484 2 751 225 113 0 chr4 9054403 9054625 -193273722 - Tigger3(Golem) DNA MER2_type -15 3014 2768 287 353 79 0 chr4 9054741 9054880 -193273467 + MIR SINE MIR 58 207 -55 762 144 0 0 chr4 9054916 9055034 -193273313 - FLAM_A SINE Alu 0 142 25 248 340 131 34 chr4 9055154 9055422 -193272925 + L2 LINE L2 2978 3271 -1 360 272 144 6 chr4 9056328 9056508 -193271839 - MLT1D LTR MaLR 0 505 301 345 265 0 20 chr4 9056572 9056670 -193271677 - MLT1D LTR MaLR -309 196 101 340 246 24 0 chr4 9057408 9057534 -193270813 + CT-rich Low_complexity Low_complexity 4 132 0 2556 42 0 3 chr4 9058048 9058357 -193269990 - AluY SINE Alu -3 308 1 244 99 70 0 chr4 9058424 9058495 -193269852 + (TG)n Simple_repeat Simple_repeat 1 76 0 602 213 20 16 chr4 9058646 9058809 -193269538 - MLT1A1 LTR MaLR 0 396 205 1548 179 4 4 chr4 9059122 9059379 -193268968 - AluJo SINE Alu -55 257 1 269 208 13 52 chr4 9059548 9059603 -193268744 + MIR SINE MIR 70 123 -85 2153 104 20 0 chr4 9059603 9059900 -193268447 - AluSx SINE Alu -9 303 1 269 208 13 52 chr4 9059900 9059921 -193268426 + MIR SINE MIR 123 143 -65 2449 57 0 7 chr4 9060853 9061153 -193267194 - AluY SINE Alu -13 298 1 1960 129 7 0 chr4 9061385 9061696 -193266651 - AluSx SINE Alu 0 313 1 1970 219 65 10 chr4 9063139 9063618 -193264729 + MLT1D LTR MaLR 1 505 0 1341 273 155 0 chr4 9063826 9064310 -193264037 + MER89 LTR ERV1 1 559 0 304 306 124 35 chr4 9064332 9064678 -193263669 - LTR16C LTR ERVL 0 491 115 2070 219 104 2 chr4 9066553 9067101 -193261246 + L1MC2 LINE L1 5741 6344 0 2180 115 3 13 chr4 9067106 9067420 -193260927 + AluSx SINE Alu 1 311 -1 261 293 48 34 chr4 9067732 9067879 -193260468 + MIR3 SINE MIR 29 177 -31 207 279 16 0 chr4 9068105 9068166 -193260181 - L2 LINE L2 -44 3228 3167 2051 134 0 0 chr4 9068558 9068856 -193259491 - AluJb SINE Alu -14 298 1 195 271 34 17 chr4 9069416 9069475 -193258872 - L2 LINE L2 -217 3055 2996 1618 290 44 39 chr4 9071108 9071698 -193256649 + MLT1G1 LTR MaLR 1 593 -2 468 250 96 0 chr4 9072614 9072750 -193255597 - MIR SINE MIR -77 185 37 185 260 82 14 chr4 9074415 9074488 -193253859 + MIR SINE MIR 39 116 -92 2204 118 0 0 chr4 9074779 9075085 -193253262 - AluSg SINE Alu -2 308 3 201 39 0 0 chr4 9075192 9075218 -193253129 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 854 276 60 31 chr4 9075695 9076141 -193252206 + MLT1C LTR MaLR 4 462 -5 1255 251 20 20 chr4 9076150 9076508 -193251839 - MER47A DNA MER2_type -6 360 3 186 333 67 0 chr4 9077002 9077092 -193251255 - MIR SINE MIR -83 125 30 1495 237 84 3 chr4 9077797 9078143 -193250204 - MLT1A2 LTR MaLR 0 374 1 1158 104 50 50 chr4 9078896 9079098 -193249249 + AluJb SINE Alu 111 312 0 1027 244 52 0 chr4 9079153 9079423 -193248924 - Charlie1b DNA MER1_type -239 284 1 432 37 0 0 chr4 9079826 9079880 -193248467 + (TG)n Simple_repeat Simple_repeat 2 55 0 2361 88 0 0 chr4 9080132 9080429 -193247918 + AluSx SINE Alu 1 297 -15 294 328 74 28 chr4 9080431 9080673 -193247674 - MIR SINE MIR -3 259 1 299 310 106 0 chr4 9080928 9081041 -193247306 - MIR SINE MIR -116 146 22 461 266 113 62 chr4 9081874 9082149 -193246198 - L2 LINE L2 -87 3185 2897 191 324 14 28 chr4 9082210 9082281 -193246066 + L2 LINE L2 3223 3292 -21 787 163 0 0 chr4 9083949 9084072 -193244275 + FLAM_C SINE Alu 15 137 -6 241 330 20 20 chr4 9084407 9084520 -193243827 - MIR SINE MIR -85 123 12 6594 90 22 0 chr4 9085341 9086329 -193242018 - L1PA10 LINE L1 0 6168 5175 300 91 0 0 chr4 9086338 9086382 -193241965 + (TTCCC)n Simple_repeat Simple_repeat 1 44 0 3085 128 21 2 chr4 9086382 9086394 -193241953 - L1PA10 LINE L1 -941 5205 5195 2110 129 3 3 chr4 9086394 9086703 -193241644 - AluSq SINE Alu -4 309 1 3085 128 21 2 chr4 9086703 9087262 -193241085 - L1PA10 LINE L1 -951 5195 4623 3186 203 17 16 chr4 9087263 9087898 -193240449 - L1MB3 LINE L1 -2 6181 5546 248 313 24 36 chr4 9087995 9088161 -193240186 + L2 LINE L2 2823 2986 -286 1139 197 171 13 chr4 9088433 9088748 -193239599 - MLT1A1 LTR MaLR 0 365 1 1624 241 75 13 chr4 9089151 9089616 -193238731 - L1MB3 LINE L1 0 6183 5690 247 291 8 103 chr4 9089690 9089807 -193238540 - MIR SINE MIR -34 228 123 2001 189 19 3 chr4 9089904 9090263 -193238084 - MLT1A1 LTR MaLR 0 365 1 529 283 33 69 chr4 9090371 9090647 -193237700 - L1MC4 LINE L1 -369 7673 7408 246 357 179 17 chr4 9090708 9091055 -193237292 - L1MB3 LINE L1 -2109 5699 5297 832 251 164 13 chr4 9092303 9092702 -193235645 + MLT1C LTR MaLR 2 619 -7 439 314 73 5 chr4 9092734 9092925 -193235422 - MIR SINE MIR -12 250 47 315 251 96 36 chr4 9094197 9094364 -193233983 - MER112 DNA MER1_type -11 249 73 652 205 33 60 chr4 9094383 9094598 -193233749 + MLT1D LTR MaLR 1 209 -296 394 269 52 0 chr4 9094713 9094847 -193233500 + MLT1D LTR MaLR 279 419 -86 322 287 36 48 chr4 9094857 9095024 -193233323 + L2 LINE L2 2950 3114 -158 211 286 0 77 chr4 9095743 9095834 -193232513 + MIR3 SINE MIR 110 193 -15 485 256 8 0 chr4 9096122 9096239 -193232108 - MER3 DNA MER1_type -10 199 82 1218 227 30 15 chr4 9096625 9096960 -193231387 - MLT1A1 LTR MaLR -25 340 1 241 200 18 0 chr4 9097106 9097161 -193231186 - MER3 DNA MER1_type -55 154 99 812 258 82 25 chr4 9097292 9097657 -193230690 + MLT1C LTR MaLR 61 446 -21 216 293 65 32 chr4 9098314 9098437 -193229910 - MIR SINE MIR -62 146 20 423 216 18 117 chr4 9098465 9098533 -193229814 + MER20 DNA MER1_type 3 76 -143 1835 157 10 7 chr4 9098533 9098833 -193229514 - AluJo SINE Alu -11 301 1 423 216 18 117 chr4 9098833 9098935 -193229412 + MER20 DNA MER1_type 76 156 -63 274 276 0 23 chr4 9099122 9099209 -193229138 + G-rich Low_complexity Low_complexity 3 87 0 2979 255 60 6 chr4 9100264 9101364 -193226983 + L1MB8 LINE L1 5014 6171 -7 252 363 11 0 chr4 9102215 9102306 -193226041 + MIR SINE MIR 46 137 -125 2489 65 0 0 chr4 9103212 9103518 -193224829 - AluY SINE Alu -5 306 1 2380 94 0 0 chr4 9103528 9103836 -193224511 - AluSc SINE Alu -1 308 1 306 279 23 62 chr4 9103945 9104031 -193224316 + L2 LINE L2 3190 3271 -42 2372 144 22 0 chr4 9104031 9104386 -193223961 - THE1B LTR MaLR -1 363 1 306 279 23 62 chr4 9104386 9104428 -193223919 + L2 LINE L2 3271 3313 0 382 356 12 12 chr4 9104608 9104768 -193223579 + MIR3 SINE MIR 38 197 -11 1493 151 29 210 chr4 9104825 9105301 -193223046 + MLT1B LTR MaLR 1 390 0 210 353 86 0 chr4 9105362 9105478 -193222869 - MIR3 SINE MIR -77 131 6 192 282 186 16 chr4 9106998 9107122 -193221225 + MIR SINE MIR 20 164 -98 218 253 12 49 chr4 9108012 9108174 -193220173 + C-rich Low_complexity Low_complexity 4 159 0 224 294 54 87 chr4 9108451 9108635 -193219712 - MIR3 SINE MIR -24 184 7 342 303 64 0 chr4 9109349 9109458 -193218889 + L2 LINE L2 3156 3271 -1 437 259 95 19 chr4 9109808 9109966 -193218381 - MIR3 SINE MIR -27 181 12 275 267 70 12 chr4 9110045 9110131 -193218216 + MIR SINE MIR 83 173 -89 1864 159 21 0 chr4 9110345 9110635 -193217712 + AluJb SINE Alu 1 296 -16 2379 78 3 0 chr4 9111659 9111967 -193216380 + AluSg SINE Alu 1 309 -1 269 328 94 8 chr4 9112638 9112766 -193215581 - MIR SINE MIR -104 158 20 615 240 67 49 chr4 9114242 9114467 -193213880 - MLT1C LTR MaLR -233 234 6 863 157 167 0 chr4 9115215 9115419 -193212928 + MLT2C1 LTR ERVL 113 350 -47 769 188 22 3 chr4 9115465 9116248 -193212099 + (TCCA)n Simple_repeat Simple_repeat 1 798 0 417 307 17 82 chr4 9116661 9116892 -193211455 + L2 LINE L2 2951 3166 -106 312 316 127 17 chr4 9118226 9118575 -193209772 + MLT1K LTR MaLR 189 566 -22 2260 101 0 0 chr4 9120222 9120519 -193207828 - AluSx SINE Alu -15 297 1 246 254 0 39 chr4 9120980 9121077 -193207270 + GA-rich Low_complexity Low_complexity 1 143 0 253 316 22 15 chr4 9121152 9121288 -193207059 - MER105 DNA DNA -67 137 1 2303 65 7 3 chr4 9122098 9122391 -193205956 + AluY SINE Alu 1 294 -17 1863 114 0 4 chr4 9122400 9122663 -193205684 + AluY SINE Alu 42 303 -8 302 331 44 37 chr4 9122667 9122803 -193205544 + L1ME1 LINE L1 6028 6164 -2 220 372 58 17 chr4 9122831 9123003 -193205344 - MIR SINE MIR -38 224 46 307 326 54 0 chr4 9123247 9123376 -193204971 + MIR3 SINE MIR 13 148 -60 1831 103 0 8 chr4 9123380 9123632 -193204715 + AluSc SINE Alu 1 250 -59 291 214 0 0 chr4 9123632 9123688 -193204659 - MLT1C LTR MaLR -411 56 1 210 214 18 18 chr4 9124589 9124645 -193203702 + (TTCA)n Simple_repeat Simple_repeat 2 57 0 460 333 64 23 chr4 9125476 9125695 -193202652 - MIR SINE MIR -29 233 6 1040 264 65 9 chr4 9126799 9127136 -193201211 - MER70A LTR ERVL -96 376 21 247 288 38 0 chr4 9127490 9127570 -193200777 - MLT1L LTR MaLR -532 83 1 533 301 121 39 chr4 9128318 9128473 -193199874 + L1ME4a LINE L1 4019 4160 -1986 2896 88 5 0 chr4 9128473 9128846 -193199501 - THE1C LTR MaLR 0 375 1 533 301 121 39 chr4 9128846 9129045 -193199302 + L1ME4a LINE L1 4160 4402 -1744 363 354 80 64 chr4 9129375 9129913 -193198434 + L1ME4a LINE L1 4954 5506 -747 280 313 104 9 chr4 9129966 9130081 -193198266 - MIR SINE MIR -13 249 124 346 323 60 8 chr4 9131275 9131408 -193196939 + L1ME4a LINE L1 5978 6117 -4 3529 123 13 11 chr4 9131709 9132325 -193196022 + MER4D LTR ERV1 1 617 -255 4391 68 13 0 chr4 9132325 9132872 -193195475 + MER41A LTR ERV1 1 554 0 3875 112 16 26 chr4 9133044 9133668 -193194679 + MER41A-int LTR ERV1 1 618 -5328 * 11299 123 43 27 chr4 9133654 9134330 -193194017 + MER41A-int LTR ERV1 1079 1743 -4203 2294 98 0 3 chr4 9134330 9134637 -193193710 - AluY SINE Alu -5 306 1 11299 123 43 27 chr4 9134637 9135007 -193193340 + MER41A-int LTR ERV1 1743 2106 -3840 2395 73 0 10 chr4 9135007 9135321 -193193026 + AluY SINE Alu 1 311 0 11299 123 43 27 chr4 9135321 9137445 -193190902 + MER41A-int LTR ERV1 2106 5944 -2 4286 70 20 0 chr4 9137445 9137988 -193190359 + MER41A LTR ERV1 1 554 0 1273 163 53 0 chr4 9137988 9138234 -193190113 + MER4D LTR ERV1 645 903 0 250 376 58 0 chr4 9139372 9139561 -193188786 + MIR SINE MIR 49 248 -14 2166 107 0 10 chr4 9141063 9141361 -193186986 + AluSp SINE Alu 1 295 -18 1735 155 0 68 chr4 9141553 9141875 -193186472 + AluJb SINE Alu 1 300 -12 741 157 8 6 chr4 9142596 9142845 -193185502 - AluJb SINE Alu -14 298 1 199 274 164 0 chr4 9143258 9143331 -193185016 + MIR SINE MIR 53 137 -125 325 282 92 14 chr4 9143982 9144124 -193184223 - L2 LINE L2 -271 3001 2849 418 254 40 0 chr4 9145677 9145803 -193182544 - MER58B DNA MER1_type -7 334 204 1886 135 10 17 chr4 9145974 9146263 -193182084 - AluJo SINE Alu -23 289 3 292 279 54 8 chr4 9148287 9148416 -193179931 + MER106A DNA MER1_type 102 236 0 244 288 12 0 chr4 9148419 9148499 -193179848 + L2 LINE L2 2987 3067 -205 2634 188 9 11 chr4 9149523 9150066 -193178281 - L1PA16 LINE L1 -156 6010 5469 24 0 0 0 chr4 9150205 9150229 -193178118 + AT_rich Low_complexity Low_complexity 1 24 0 245 286 114 9 chr4 9152113 9152218 -193176129 + MIR SINE MIR 28 143 -119 943 173 0 0 chr4 9153656 9153806 -193174541 - AluJb SINE Alu -15 297 148 2093 132 0 0 chr4 9154053 9154356 -193173991 - AluY SINE Alu -8 303 1 243 307 97 29 chr4 9155108 9155294 -193173053 - MIR SINE MIR -30 232 33 259 288 159 18 chr4 9155551 9155720 -193172627 - MIR SINE MIR -38 224 34 2605 30 3 0 chr4 9156579 9156884 -193171463 + AluY SINE Alu 2 307 -4 350 235 65 53 chr4 9157194 9157364 -193170983 + MLT1D LTR MaLR 42 213 -292 193 273 61 0 chr4 9158953 9159019 -193169328 - MIR3 SINE MIR -54 154 85 360 179 0 95 chr4 9159084 9159263 -193169084 + (CACCT)n Simple_repeat Simple_repeat 2 163 0 2424 70 0 0 chr4 9160152 9160454 -193167893 + AluY SINE Alu 1 302 -9 668 313 25 0 chr4 9161027 9161228 -193167119 - MIR SINE MIR -19 243 38 228 291 64 36 chr4 9162156 9162266 -193166081 + L2 LINE L2 3173 3285 -28 2119 116 7 0 chr4 9163690 9163992 -193164355 + AluSx SINE Alu 1 304 -8 1275 162 4 26 chr4 9163993 9164222 -193164125 + AluJo SINE Alu 71 294 -18 188 352 56 40 chr4 9164612 9164737 -193163610 - L3 LINE CR1 -572 1005 879 651 26 0 0 chr4 9164866 9164943 -193163404 + (TATATG)n Simple_repeat Simple_repeat 1 77 0 847 265 56 8 chr4 9165462 9165696 -193162651 - MIR SINE MIR -3 259 15 1342 175 0 43 chr4 9165905 9166139 -193162208 - MER58A DNA MER1_type 0 224 1 468 51 0 0 chr4 9166630 9166689 -193161658 + (TG)n Simple_repeat Simple_repeat 2 60 0 1959 112 0 11 chr4 9166776 9167090 -193161257 - AluSx SINE Alu 0 311 1 763 107 80 0 chr4 9167167 9167279 -193161068 - 5S rRNA rRNA 0 121 1 435 328 75 0 chr4 9167751 9167937 -193160410 + MIR SINE MIR 50 249 -13 461 290 193 0 chr4 9168587 9168763 -193159584 + L2 LINE L2 3021 3230 -42 349 304 48 0 chr4 9168776 9168901 -193159446 + MIR SINE MIR 44 174 -88 549 272 0 0 chr4 9169886 9170428 -193157919 + (TG)n Simple_repeat Simple_repeat 1 542 0 602 259 23 29 chr4 9170466 9170640 -193157707 - MIR SINE MIR -29 233 61 495 294 43 27 chr4 9170721 9170905 -193157442 - MER5A DNA MER1_type 0 189 3 247 185 0 56 chr4 9170931 9170985 -193157362 + L2 LINE L2 3213 3263 -9 302 261 210 0 chr4 9171850 9171969 -193156378 + MIR3 SINE MIR 3 146 -62 997 260 7 11 chr4 9172913 9173190 -193155157 - L1MC3 LINE L1 0 7785 7510 1154 81 7 0 chr4 9173213 9173362 -193154985 - AluSg SINE Alu -160 150 1 1837 193 60 53 chr4 9173364 9173706 -193154641 - L1MC3 LINE L1 -1097 6688 6341 1978 122 7 0 chr4 9173706 9173992 -193154355 - AluJb SINE Alu -24 288 1 1837 193 60 53 chr4 9173992 9174136 -193154211 - L1MC3 LINE L1 -1444 6341 6199 233 116 23 0 chr4 9174143 9174186 -193154161 - L1MC3 LINE L1 -1543 6242 6199 723 171 46 129 chr4 9174192 9174321 -193154026 - L1MC3 LINE L1 -1542 6243 6146 2111 115 0 0 chr4 9174321 9174616 -193153731 + AluSq SINE Alu 5 299 -14 723 171 46 129 chr4 9174616 9174749 -193153598 - L1MC3 LINE L1 -1639 6146 6003 499 319 133 11 chr4 9174766 9175133 -193153214 - L1MC3 LINE L1 -1810 5998 5587 978 276 54 13 chr4 9175512 9175903 -193152444 + L1MC3 LINE L1 7379 7785 0 2325 97 0 0 chr4 9175925 9176225 -193152122 + AluSx SINE Alu 1 300 -12 393 236 52 52 chr4 9176241 9176415 -193151932 + L2 LINE L2 2938 3111 -161 1783 204 75 81 chr4 9176428 9176804 -193151543 - L1MC3 LINE L1 -380 7405 7033 2208 117 3 0 chr4 9176804 9177113 -193151234 - AluSg SINE Alu 0 310 1 1783 204 75 81 chr4 9177113 9177352 -193150995 - L1MC3 LINE L1 -752 7033 6794 2044 119 3 7 chr4 9179912 9180205 -193148142 - AluJo SINE Alu -20 292 1 202 290 130 40 chr4 9180934 9181034 -193147313 - MER5B DNA MER1_type -5 173 65 180 278 19 0 chr4 9181110 9181164 -193147183 - MIR SINE MIR -65 143 89 2029 99 3 20 chr4 9181222 9181542 -193146805 - AluSx SINE Alu 0 315 1 223 182 36 36 chr4 9181595 9181650 -193146697 + MIR SINE MIR 85 139 -69 2095 110 0 0 chr4 9181694 9182038 -193146309 - AluSg SINE Alu 0 344 1 376 272 93 12 chr4 9182254 9182416 -193145931 + MER58A DNA MER1_type 42 216 -8 282 305 70 25 chr4 9182698 9182898 -193145449 + L2 LINE L2 2957 3165 -107 266 274 17 60 chr4 9184183 9184300 -193144047 + MIR SINE MIR 13 124 -138 386 286 110 0 chr4 9184478 9184632 -193143715 - MIR3 SINE MIR -22 186 16 236 258 134 0 chr4 9185049 9185146 -193143201 - MIR SINE MIR -63 145 36 870 268 67 42 chr4 9186236 9186639 -193141708 + MLT1C LTR MaLR 53 465 -2 802 191 64 25 chr4 9187210 9187414 -193140933 + MER20 DNA MER1_type 6 217 -2 300 301 78 2 chr4 9187425 9187561 -193140786 + MIR SINE MIR 31 143 -65 261 250 0 0 chr4 9188129 9188205 -193140142 + (TG)n Simple_repeat Simple_repeat 1 76 0 255 326 101 0 chr4 9189569 9189707 -193138640 + MIR SINE MIR 33 184 -78 605 258 154 41 chr4 9189947 9190292 -193138055 - MLT1C LTR MaLR -66 401 18 242 323 202 0 chr4 9190462 9190586 -193137761 - MIR SINE MIR -6 256 108 183 311 33 0 chr4 9190991 9191052 -193137295 - L2 LINE L2 -2 3270 3208 240 86 0 0 chr4 9192513 9192548 -193135799 + (TG)n Simple_repeat Simple_repeat 1 35 0 225 275 100 0 chr4 9192560 9192640 -193135707 + MIR SINE MIR 90 177 -85 203 193 0 57 chr4 9194625 9194713 -193133634 + CT-rich Low_complexity Low_complexity 2 84 0 219 295 67 0 chr4 9194976 9195081 -193133266 - MIR SINE MIR -62 146 35 188 308 0 0 chr4 9195303 9195355 -193132992 + L2 LINE L2 3221 3272 0 2411 256 152 31 chr4 9195968 9196069 -193132278 - L1MC4 LINE L1 -13 8029 7942 354 80 0 0 chr4 9196069 9196119 -193132228 + (TG)n Simple_repeat Simple_repeat 1 50 0 2411 256 152 31 chr4 9196119 9197130 -193131217 - L1MC4 LINE L1 -100 7942 6783 1789 213 58 11 chr4 9197130 9197563 -193130784 - LTR32 LTR ERVL 0 471 19 2127 96 51 0 chr4 9197609 9197901 -193130446 - AluSx SINE Alu -5 307 1 193 333 31 21 chr4 9197907 9198003 -193130344 - L2 LINE L2 -15 3257 3161 903 242 62 10 chr4 9198381 9198802 -193129545 + MLT1D LTR MaLR 14 486 -19 189 235 29 137 chr4 9199150 9199252 -193129095 + MER5A DNA MER1_type 1 91 -98 2080 74 88 0 chr4 9199738 9200021 -193128326 + AluSx SINE Alu 1 308 -4 291 153 27 54 chr4 9200246 9200357 -193127990 + CT-rich Low_complexity Low_complexity 1 108 0 311 219 31 25 chr4 9200413 9200573 -193127774 + CT-rich Low_complexity Low_complexity 1 161 0 499 283 11 33 chr4 9200603 9200783 -193127564 + C-rich Low_complexity Low_complexity 4 179 0 312 370 25 6 chr4 9202559 9202721 -193125626 + MIR SINE MIR 86 250 -12 318 304 45 9 chr4 9202773 9202835 -193125512 + MIR SINE MIR 48 117 -145 1467 207 51 10 chr4 9202835 9203130 -193125217 + AluJo SINE Alu 1 307 -5 318 304 45 9 chr4 9203130 9203179 -193125168 + MIR SINE MIR 117 163 -99 2051 125 0 13 chr4 9203889 9204192 -193124155 - AluSx SINE Alu -1 311 13 328 336 27 0 chr4 9205036 9205146 -193123201 - MIR SINE MIR -111 151 39 226 298 34 73 chr4 9205881 9206059 -193122288 - MIR3 SINE MIR -30 178 8 262 354 34 0 chr4 9206496 9206628 -193121719 + MIR SINE MIR 45 182 -63 497 305 28 7 chr4 9207023 9207164 -193121183 - MIR3 SINE MIR -46 162 19 243 88 0 0 chr4 9207335 9207369 -193120978 + (TG)n Simple_repeat Simple_repeat 2 35 0 542 105 13 0 chr4 9207675 9207751 -193120596 + MADE1 DNA Mariner 1 77 -3 184 231 0 19 chr4 9208321 9208373 -193119974 + MIR SINE MIR 104 154 -108 1340 250 120 19 chr4 9208992 9209416 -193118931 - MLT1C LTR MaLR 0 467 1 1708 218 114 2 chr4 9210671 9211195 -193117152 - L1MD3 LINE L1 0 8040 7472 2215 107 3 3 chr4 9211582 9211891 -193116456 - AluSx SINE Alu -1 311 3 186 43 0 0 chr4 9211896 9211919 -193116428 + (TTG)n Simple_repeat Simple_repeat 2 24 0 2081 116 0 7 chr4 9212854 9213156 -193115191 - AluSx SINE Alu -11 301 2 398 335 0 28 chr4 9213159 9213341 -193115006 + (CATA)n Simple_repeat Simple_repeat 3 179 0 * 425 328 0 24 chr4 9213246 9213451 -193114896 + (CA)n Simple_repeat Simple_repeat 1 200 0 193 302 105 12 chr4 9213813 9213899 -193114448 - MIR SINE MIR -56 206 113 460 207 36 9 chr4 9218057 9218168 -193110179 - MER81 DNA DNA 0 114 1 196 202 17 34 chr4 9218621 9218740 -193109607 + (TGAG)n Simple_repeat Simple_repeat 4 120 0 2047 260 13 74 chr4 9219343 9219526 -193108821 - L1 LINE L1 -2705 3441 3248 831 135 8 8 chr4 9219526 9219659 -193108688 - FLAM_C SINE Alu 0 133 1 2047 260 13 74 chr4 9219659 9220007 -193108340 - L1 LINE L1 -2898 3248 2982 2016 110 10 7 chr4 9220007 9220298 -193108049 - AluJb SINE Alu -12 300 9 2047 260 13 74 chr4 9220298 9220643 -193107704 - L1 LINE L1 -3164 2982 2617 201 180 20 20 chr4 9221396 9221446 -193106901 + G-rich Low_complexity Low_complexity 6 55 0 655 253 39 28 chr4 9222075 9222257 -193106090 + MER5A DNA MER1_type 6 189 0 861 133 27 12 chr4 9222821 9223084 -193105263 + (TCCA)n Simple_repeat Simple_repeat 1 267 0 903 154 26 5 chr4 9223108 9223687 -193104660 + (TCCA)n Simple_repeat Simple_repeat 1 591 0 903 169 0 0 chr4 9223703 9223875 -193104472 + (TCCA)n Simple_repeat Simple_repeat 4 175 0 452 259 24 0 chr4 9225005 9225136 -193103211 - MIR3 SINE MIR -52 156 45 236 263 0 0 c