1992 145 26 83 chr2 0 56 -253256527 - L1MA5 LINE L1 -3 6297 6239 1653 120 13 0 chr2 56 281 -253256302 - AluSq SINE Alu -85 228 1 1992 145 26 83 chr2 281 345 -253256238 - L1MA5 LINE L1 -61 6239 6173 423 0 0 0 chr2 345 392 -253256191 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 1992 145 26 83 chr2 392 406 -253256177 - L1MA5 LINE L1 -127 6173 6160 1887 143 0 0 chr2 406 679 -253255904 - AluJb SINE Alu -28 284 12 1992 145 26 83 chr2 679 962 -253255621 - L1MA5 LINE L1 -140 6160 5902 1408 212 54 25 chr2 954 1282 -253255301 - L1M2 LINE L1 -4504 2345 2001 * 2186 72 0 0 chr2 1282 1545 -253255038 - AluY SINE Alu -48 263 1 1408 212 54 25 chr2 1545 1622 -253254961 - L1M2 LINE L1 -4848 2001 1928 780 195 0 0 chr2 1727 1855 -253254728 - FLAM_C SINE Alu -13 130 3 520 216 147 0 chr2 3471 3535 -253253048 - MER94 DNA DNA -1 133 80 2066 120 17 0 chr2 3535 3827 -253252756 - AluSx SINE Alu -15 297 1 520 216 147 0 chr2 3827 3878 -253252705 - MER94 DNA DNA -54 80 1 372 235 45 45 chr2 3884 4016 -253252567 + MIR3 SINE MIR 68 199 -9 31 0 0 0 chr2 8080 8111 -253248472 + AT_rich Low_complexity Low_complexity 1 31 0 196 321 46 18 chr2 8204 8313 -253248270 - L3b LINE CR1 -204 1379 1268 743 242 107 115 chr2 10223 10735 -253245848 + MLT1H LTR MaLR 42 549 0 2264 173 89 30 chr2 11097 11570 -253245013 + MLT1D LTR MaLR 5 505 0 377 270 59 26 chr2 11927 12079 -253244504 + MER67A LTR ERV1 387 543 0 1481 178 3 38 chr2 12760 13052 -253243531 - AluJo SINE Alu -18 294 13 273 322 16 16 chr2 13203 13324 -253243259 - MLT1H LTR MaLR -387 162 42 461 188 31 10 chr2 13659 13755 -253242828 + MER4A LTR ERV1 1 98 -566 1594 143 27 79 chr2 13755 14119 -253242464 + MER4A LTR ERV1 261 664 0 2696 118 3 6 chr2 15360 15725 -253240858 - THE1B LTR MaLR 0 364 1 11490 113 33 3 chr2 15725 17258 -253239325 - THE1B-int LTR MaLR 0 1580 1 2541 126 14 16 chr2 17258 17623 -253238960 - THE1B LTR MaLR 0 364 1 1844 135 0 82 chr2 18927 19246 -253237337 - MER4A LTR ERV1 0 664 372 264 263 197 0 chr2 19481 19618 -253236965 + MIR SINE MIR 32 195 -67 566 274 48 84 chr2 19894 20252 -253236331 - MLT1J1 LTR MaLR -37 409 65 286 309 40 24 chr2 21512 21638 -253234945 - L1ME3A LINE L1 -8 6162 6035 2071 231 57 19 chr2 21663 22186 -253234397 - MER90 LTR ERV1 0 614 72 200 295 90 41 chr2 23800 23922 -253232661 + MIR SINE MIR 20 147 -115 198 286 16 32 chr2 24001 24064 -253232519 + MIR3 SINE MIR 130 191 -17 197 275 0 0 chr2 24269 24309 -253232274 - L2 LINE L2 -14 3258 3219 * 239 313 153 14 chr2 24304 24448 -253232135 - MIR SINE MIR -93 169 6 1719 166 32 32 chr2 26067 26375 -253230208 + AluJo SINE Alu 1 308 -4 22 56 0 0 chr2 26456 26492 -253230091 + AT_rich Low_complexity Low_complexity 1 36 0 853 229 143 48 chr2 26493 26829 -253229754 - L1MC4 LINE L1 -437 7605 7238 1748 259 12 79 chr2 26831 27143 -253229440 - L1MC4a LINE L1 -803 7005 6674 1527 205 3 7 chr2 27143 27426 -253229157 + AluJo SINE Alu 1 282 -30 1748 259 12 79 chr2 27426 27533 -253229050 - L1MC4a LINE L1 -1134 6674 6635 342 0 0 0 chr2 27533 27571 -253229012 + (CA)n Simple_repeat Simple_repeat 2 39 0 1748 259 12 79 chr2 27571 27744 -253228839 - L1MC4a LINE L1 -1173 6635 6452 291 252 9 19 chr2 28247 28354 -253228229 + (TA)n Simple_repeat Simple_repeat 1 106 0 28 61 0 0 chr2 28412 28461 -253228122 + AT_rich Low_complexity Low_complexity 1 49 0 315 276 123 58 chr2 29005 29248 -253227335 + L1M4 LINE L1 2917 3175 -2971 880 228 106 26 chr2 29265 29577 -253227006 + L1M4 LINE L1 2142 2478 -3668 1652 138 0 0 chr2 29587 29826 -253226757 + L1P3 LINE L1 10 248 -6213 4742 131 58 99 chr2 29826 31256 -253225327 + pTR5 LTR ERV1 742 2433 -5 11163 107 15 14 chr2 31257 33063 -253223520 + L1P3 LINE L1 238 2041 -4420 3440 200 31 71 chr2 33063 34073 -253222510 + LTR5 LTR ERVK 1 969 0 11163 107 15 14 chr2 34073 34515 -253222068 + L1P3 LINE L1 2041 2499 -3962 22626 97 11 1 chr2 34515 38410 -253218173 + L1PA7 LINE L1 2254 6154 0 11163 107 15 14 chr2 38410 38444 -253218139 + L1P3 LINE L1 2499 2531 -3930 2023 61 4 8 chr2 38576 38838 -253217745 + AluY SINE Alu 34 294 -17 553 317 107 26 chr2 39186 39480 -253217103 - L2 LINE L2 -6 3307 3038 1628 122 35 8 chr2 39480 39735 -253216848 + AluSx SINE Alu 44 305 -7 553 317 107 26 chr2 39735 39959 -253216624 - L2 LINE L2 -275 3038 2742 24 53 0 0 chr2 40812 40850 -253215733 + AT_rich Low_complexity Low_complexity 1 38 0 349 350 106 0 chr2 41201 41381 -253215202 + MIR SINE MIR 49 247 -15 4491 172 86 19 chr2 41486 42520 -253214063 - L1MA4A LINE L1 -23 6982 5880 * 12065 197 19 11 chr2 42515 45098 -253211485 - L1MA4A LINE L1 -1221 5627 3022 10227 215 67 27 chr2 45426 46328 -253210255 - L1MA4A LINE L1 -3811 3037 2172 2103 121 3 0 chr2 46328 46618 -253209965 - AluSx SINE Alu -21 291 1 10227 215 67 27 chr2 46618 48437 -253208146 - L1MA4A LINE L1 -4676 2172 208 317 82 20 0 chr2 48689 48738 -253207845 + (GGAA)n Simple_repeat Simple_repeat 3 52 0 26 0 0 0 chr2 49518 49544 -253207039 + AT_rich Low_complexity Low_complexity 1 26 0 226 296 101 16 chr2 49764 50011 -253206572 + L1ME4a LINE L1 5820 6087 -34 502 250 101 60 chr2 50508 50756 -253205827 - MIR SINE MIR 0 262 5 2315 103 0 0 chr2 51102 51402 -253205181 - AluSx SINE Alu -12 300 1 291 293 0 40 chr2 52047 52122 -253204461 + L2 LINE L2 3181 3252 -20 287 263 64 99 chr2 52543 52714 -253203869 - L3 LINE CR1 -350 1227 1063 2266 112 3 0 chr2 52906 53209 -253203374 + AluSx SINE Alu 1 304 -8 281 333 24 56 chr2 53224 53350 -253203233 + L2 LINE L2 3116 3237 -35 195 301 60 48 chr2 53516 53599 -253202984 - MIR SINE MIR -168 94 11 264 207 261 27 chr2 54790 54901 -253201682 + L2 LINE L2 3136 3272 0 2273 90 3 7 chr2 55311 55612 -253200971 + AluSc SINE Alu 1 300 -9 545 300 77 66 chr2 55723 56073 -253200510 - L2 LINE L2 -368 2946 2593 3759 227 55 2 chr2 56074 56923 -253199660 - MER45B DNA AcHobo -145 895 2 1543 208 5 49 chr2 56981 57191 -253199392 + Charlie4a DNA MER1_type 67 250 -1711 2060 111 7 24 chr2 57191 57489 -253199094 + AluSg SINE Alu 1 293 -17 1543 208 5 49 chr2 57489 57705 -253198878 + Charlie4a DNA MER1_type 250 474 -34 554 259 228 4 chr2 57724 57983 -253198600 - L2 LINE L2 -2959 355 39 318 218 45 115 chr2 58384 58457 -253198126 - HAL1 LINE L1 -1588 919 861 1939 117 28 14 chr2 58457 58748 -253197835 + AluSx SINE Alu 1 295 -17 318 218 45 115 chr2 58748 58830 -253197753 - HAL1 LINE L1 -1646 861 775 221 298 0 0 chr2 59532 59589 -253196994 + MER5B DNA MER1_type 122 178 0 492 229 144 8 chr2 60204 60322 -253196261 - MER94 DNA DNA 0 134 1 654 242 88 16 chr2 60660 60854 -253195729 - MIR SINE MIR -2 260 53 310 302 100 83 chr2 60954 61364 -253195219 - L2 LINE L2 -3 3269 2853 225 0 0 0 chr2 61470 61495 -253195088 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 335 252 93 0 chr2 64313 64420 -253192163 + MIR SINE MIR 100 216 -46 409 213 87 47 chr2 64442 64569 -253192014 - MIR SINE MIR -124 138 7 7411 54 5 13 chr2 65185 66662 -253189921 + SVA Other Other 1 1386 0 277 371 60 22 chr2 66778 67010 -253189573 - MIR SINE MIR -1 261 21 4387 189 9 40 chr2 67848 68848 -253187735 - L1 LINE L1 -1055 5091 4123 197 132 26 0 chr2 69017 69055 -253187528 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 573 270 20 14 chr2 69676 69824 -253186759 + MER5B DNA MER1_type 30 178 0 1921 169 3 3 chr2 69938 70246 -253186337 - AluJo SINE Alu -4 308 1 2148 103 3 0 chr2 71659 71941 -253184642 + AluSp SINE Alu 2 284 -29 1613 208 3 3 chr2 72110 72422 -253184161 + AluJb SINE Alu 1 312 0 336 222 247 31 chr2 72531 72693 -253183890 + L1ME3A LINE L1 5612 5808 -354 239 200 46 31 chr2 72722 72787 -253183796 - LTR43 LTR ERV1 -24 578 513 959 266 50 16 chr2 72875 73195 -253183388 - LTR43 LTR ERV1 -141 461 131 998 209 59 62 chr2 73276 73615 -253182968 + L1ME3A LINE L1 5825 6162 -8 3698 148 26 11 chr2 74109 74717 -253181866 + L1MC1 LINE L1 5709 6325 -8 2678 99 79 27 chr2 74718 75060 -253181523 + MSTA LTR MaLR 1 369 -59 1830 144 27 27 chr2 75060 75359 -253181224 + AluSx SINE Alu 1 299 -13 2678 99 79 27 chr2 75359 75421 -253181162 + MSTA LTR MaLR 369 426 -2 2454 208 73 7 chr2 76767 77333 -253179250 - L1MA9 LINE L1 -539 5773 5166 1922 181 20 75 chr2 77326 77834 -253178749 + L1MA9 LINE L1 5803 6282 -30 * 22 0 0 0 chr2 77834 77856 -253178727 + AT_rich Low_complexity Low_complexity 1 22 0 1157 218 20 110 chr2 77918 78317 -253178266 + MLT1A1 LTR MaLR 1 363 -2 2344 135 114 5 chr2 80626 81012 -253175571 - MSTA LTR MaLR 0 428 1 1931 73 0 8 chr2 81367 81614 -253174969 + AluY SINE Alu 54 298 -13 32 75 0 0 chr2 82008 82075 -253174508 + AT_rich Low_complexity Low_complexity 1 67 0 1804 87 0 0 chr2 82080 82310 -253174273 - PABL_A LTR ERV1 -430 230 1 10992 77 15 1 chr2 82310 83724 -253172859 - PABL_A-int LTR ERV1 0 5015 3583 198 208 188 0 chr2 83975 84023 -253172560 - L2 LINE L2 -249 3023 2967 270 247 0 55 chr2 84042 84115 -253172468 + L2 LINE L2 3242 3310 -3 312 291 81 12 chr2 84238 84410 -253172173 - L1MEc LINE L1 -4976 1587 1404 720 188 0 99 chr2 84478 84659 -253171924 + Tigger1 DNA MER2_type 1 163 -2255 * 1236 156 24 5 chr2 84641 84853 -253171730 + Tigger1 DNA MER2_type 2203 2418 0 7310 223 52 31 chr2 84853 84916 -253171667 - L1MEc LINE L1 -1913 4469 4409 2269 105 20 0 chr2 84916 85220 -253171363 - AluSp SINE Alu -3 310 1 7310 223 52 31 chr2 85220 85864 -253170719 - L1MEc LINE L1 -1973 4409 3780 192 77 0 0 chr2 85864 85890 -253170693 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 7310 223 52 31 chr2 85890 86784 -253169799 - L1MEc LINE L1 -2602 3780 2811 2187 170 31 0 chr2 86784 87137 -253169446 - THE1B LTR MaLR 0 364 1 7310 223 52 31 chr2 87137 87605 -253168978 - L1MEc LINE L1 -3571 2811 2354 2451 162 42 50 chr2 87609 88091 -253168492 + MER44D DNA MER2_type 4 481 -224 2371 136 48 112 chr2 88114 88778 -253167805 + MER4A LTR ERV1 1 465 0 1280 168 52 22 chr2 88780 89012 -253167571 + MER44D DNA MER2_type 479 589 -16 421 214 44 13 chr2 89016 89176 -253167407 - L1MEc LINE L1 -4018 2365 2202 671 91 10 20 chr2 89185 89284 -253167299 + MER4A LTR ERV1 1 98 -566 1649 103 45 91 chr2 89284 89646 -253166937 + MER4A LTR ERV1 261 664 0 328 255 41 0 chr2 89646 89744 -253166839 - L1MEc LINE L1 -4190 2194 2093 597 265 180 51 chr2 90523 90995 -253165588 - L1MEc LINE L1 -5381 991 459 538 166 32 35 chr2 91029 91184 -253165399 + MER51A LTR ERV1 1 154 -223 1631 174 46 10 chr2 91186 91490 -253165093 + MER51B LTR ERV1 63 377 0 330 242 74 34 chr2 91609 91758 -253164825 - HAL1b LINE L1 0 1348 1194 1210 65 130 0 chr2 92366 92535 -253164048 - LTR17 LTR ERV1 -2 778 588 898 85 0 0 chr2 92551 92669 -253163914 + AluY SINE Alu 187 304 -7 4898 67 0 3 chr2 92669 93269 -253163314 - LTR17 LTR ERV1 -182 598 1 2403 65 0 0 chr2 93269 93560 -253163023 - HERV17 LTR ERV1 0 8626 8336 303 98 0 0 chr2 93550 93591 -253162992 - HERV17 LTR ERV1 -1077 7549 7509 * 9680 47 10 0 chr2 93583 94731 -253161852 - HERV17 LTR ERV1 -2607 6019 4861 14584 45 4 3 chr2 94833 97002 -253159581 - HERV17 LTR ERV1 -4023 4603 2432 13791 70 17 26 chr2 97001 98835 -253157748 - HERV17 LTR ERV1 -6808 1818 1 * 6348 64 30 5 chr2 98835 99596 -253156987 - LTR17 LTR ERV1 0 780 1 218 340 53 0 chr2 100110 100204 -253156379 - L2 LINE L2 -262 3051 2953 1518 183 7 43 chr2 100827 101128 -253155455 + AluJb SINE Alu 1 290 -22 484 358 29 5 chr2 102674 102878 -253153705 + L3 LINE CR1 1261 1469 -108 7657 52 6 0 chr2 102962 104312 -253152271 + L1PA7 LINE L1 4793 6152 -2 208 308 91 28 chr2 105400 105543 -253151040 + MIR SINE MIR 36 187 -75 4364 192 56 10 chr2 106711 108046 -253148537 + L1MC2 LINE L1 4791 6170 -174 196 270 27 40 chr2 108747 108821 -253147762 + MIR3 SINE MIR 84 156 -52 32 0 0 0 chr2 108911 108943 -253147640 + AT_rich Low_complexity Low_complexity 1 32 0 378 61 0 0 chr2 109715 109764 -253146819 + (CA)n Simple_repeat Simple_repeat 2 50 0 2636 51 0 0 chr2 110276 110587 -253145996 + AluY SINE Alu 1 311 0 233 250 40 13 chr2 110740 110816 -253145767 - HsTC2 DNA Tc2 -1820 78 1 264 269 75 32 chr2 112932 113025 -253143558 + HAL1 LINE L1 806 902 -1605 450 219 0 0 chr2 113144 113249 -253143334 + (CATATA)n Simple_repeat Simple_repeat 2 106 0 713 136 19 0 chr2 113249 113352 -253143231 - AluSx SINE Alu -16 293 189 969 149 0 0 chr2 113352 113493 -253143090 - AluSx SINE Alu -172 141 1 22 0 0 0 chr2 113594 113616 -253142967 + AT_rich Low_complexity Low_complexity 1 22 0 1870 167 17 0 chr2 116057 116356 -253140227 + AluSx SINE Alu 1 304 -8 3196 103 38 0 chr2 117228 117324 -253139259 + L1PB1 LINE L1 5684 5775 -376 182 37 37 0 chr2 117324 117351 -253139232 + (TA)n Simple_repeat Simple_repeat 1 28 0 * 324 0 0 0 chr2 117350 117386 -253139197 + (CA)n Simple_repeat Simple_repeat 2 37 0 3196 103 38 0 chr2 117351 117737 -253138846 + L1PB1 LINE L1 5775 6148 -3 637 307 32 42 chr2 118728 119158 -253137425 + LTR35 LTR ERV1 141 556 0 1559 256 22 24 chr2 119163 119577 -253137006 + LTR35-int LTR ERV1 5 417 -1369 1005 96 0 20 chr2 119585 119731 -253136852 + L1PA4 LINE L1 6012 6154 -1 5983 176 49 36 chr2 119812 121105 -253135478 + LTR57-int LTR ERVL 288 1596 -3747 * 6258 159 79 78 chr2 120157 122450 -253134133 + LTR35-int LTR ERV1 682 4183 -2148 625 135 76 189 chr2 122586 122771 -253133812 + LOR1-int LTR ERV1 3786 3949 -4171 367 93 30 81 chr2 122897 122997 -253133586 + LOR1-int LTR ERV1 4602 4682 -1264 1108 189 5 5 chr2 123001 123191 -253133392 + LOR1-int LTR ERV1 6908 7097 -1023 4043 153 59 22 chr2 123194 123480 -253133103 + MER49 LTR ERV1 1 275 -648 2619 127 16 0 chr2 123480 123849 -253132734 + THE1C LTR MaLR 1 375 0 4043 153 59 22 chr2 123849 124294 -253132289 + MER49 LTR ERV1 275 759 -164 365 282 71 81 chr2 124481 124852 -253131731 + LOR1-int LTR ERV1 4971 7466 -654 736 270 59 55 chr2 125043 125495 -253131088 + LTR35 LTR ERV1 88 556 0 23 0 0 0 chr2 125615 125638 -253130945 + AT_rich Low_complexity Low_complexity 1 23 0 1104 277 108 36 chr2 125792 126290 -253130293 + MLT1E LTR MaLR 52 585 -8 225 0 0 0 chr2 126294 126319 -253130264 + (CAAAAA)n Simple_repeat Simple_repeat 2 26 0 481 234 70 88 chr2 126335 126562 -253130021 + L1MC4 LINE L1 7820 8042 0 2795 168 25 41 chr2 126677 127194 -253129389 - LTR22 LTR ERVK 0 509 1 819 115 0 0 chr2 127384 127514 -253129069 + (GGAA)n Simple_repeat Simple_repeat 3 132 0 1607 210 49 3 chr2 127840 128187 -253128396 + MLT1A1 LTR MaLR 1 363 -2 331 313 146 18 chr2 128261 128536 -253128047 + L1MEd LINE L1 602 911 -5723 437 295 100 33 chr2 128825 129205 -253127378 + L1MEd LINE L1 1220 1716 -4971 415 323 46 5 chr2 129218 129413 -253127170 + L2 LINE L2 2636 2838 -476 516 253 133 28 chr2 129495 129744 -253126839 + L2 LINE L2 3039 3313 0 26 30 0 0 chr2 131058 131091 -253125492 + AT_rich Low_complexity Low_complexity 1 33 0 305 328 61 22 chr2 131297 131477 -253125106 - MIR SINE MIR -43 219 33 6387 102 48 1 chr2 132128 133055 -253123528 - Tigger1 DNA MER2_type -777 1641 672 605 203 47 20 chr2 133300 133448 -253123135 - L1MC2 LINE L1 -9 6335 6184 376 238 139 112 chr2 134146 134676 -253121907 + L1M2 LINE L1 455 1434 -5415 448 66 0 0 chr2 134886 134947 -253121636 + Alu SINE Alu 235 295 -14 284 62 0 21 chr2 135352 135400 -253121183 + (CA)n Simple_repeat Simple_repeat 2 48 0 25 51 0 0 chr2 135618 135657 -253120926 + AT_rich Low_complexity Low_complexity 1 39 0 2252 248 95 11 chr2 135803 136509 -253120074 - L1ME1 LINE L1 -128 6107 5343 1109 213 49 0 chr2 136524 136787 -253119796 - L1MA4 LINE L1 -11 6289 6014 360 271 43 7 chr2 136883 137023 -253119560 - L1ME1 LINE L1 -5000 1396 1252 243 278 47 53 chr2 137103 137314 -253119269 - L1ME LINE L1 -4723 1278 778 475 310 90 29 chr2 137720 138097 -253118486 - L2 LINE L2 -662 2652 2253 21 0 0 0 chr2 138759 138780 -253117803 + AT_rich Low_complexity Low_complexity 1 21 0 1732 188 28 17 chr2 139330 139691 -253116892 + MLT1A1 LTR MaLR 1 365 0 263 28 28 0 chr2 140227 140263 -253116320 + (TAA)n Simple_repeat Simple_repeat 3 39 0 246 269 51 0 chr2 141120 141198 -253115385 - MIR SINE MIR -95 167 86 472 193 11 0 chr2 142486 142574 -253114009 + MER20 DNA MER1_type 129 217 -2 216 226 32 16 chr2 143215 143277 -253113306 - MIR SINE MIR -172 90 28 435 223 48 0 chr2 145221 145324 -253111259 - Charlie2 DNA MER1_type -892 1970 1863 376 365 68 4 chr2 145354 145617 -253110966 - Charlie2 DNA MER1_type -2502 280 1 325 286 20 34 chr2 146387 146534 -253110049 + L1MC4a LINE L1 5296 5440 -681 326 332 50 23 chr2 147255 147604 -253108979 + L1MC4a LINE L1 5531 5819 -302 21 0 0 0 chr2 147612 147633 -253108950 + AT_rich Low_complexity Low_complexity 1 21 0 189 0 0 0 chr2 147934 147955 -253108628 + (TG)n Simple_repeat Simple_repeat 2 22 0 2878 10 0 0 chr2 149492 149798 -253106785 + AluYa5 SINE Alu 1 306 -5 1451 167 29 8 chr2 150574 150814 -253105769 - AluSx SINE Alu -28 284 40 22 35 0 0 chr2 151244 151273 -253105310 + AT_rich Low_complexity Low_complexity 1 29 0 240 149 0 0 chr2 151522 151569 -253105014 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 2387 70 0 0 chr2 152488 152788 -253103795 - L1PA6 LINE L1 0 6154 5855 234 269 160 9 chr2 152792 153004 -253103579 + L1ME4a LINE L1 5865 6108 -13 187 317 29 10 chr2 154506 154610 -253101973 - MIR SINE MIR 0 262 157 2315 90 10 3 chr2 154921 155221 -253101362 - AluSq SINE Alu -11 302 1 207 266 11 68 chr2 156146 156323 -253100260 + (CAGGG)n Simple_repeat Simple_repeat 1 167 0 272 250 64 70 chr2 156349 156509 -253100074 + MIR SINE MIR 58 216 -46 378 316 9 47 chr2 156509 156724 -253099859 + MIR SINE MIR 1 207 -55 1059 182 20 20 chr2 157623 157876 -253098707 + L1MA4 LINE L1 6044 6296 -4 326 220 180 20 chr2 158112 158304 -253098279 + LTR52 LTR ERVL 9 169 -252 378 0 0 0 chr2 158304 158346 -253098237 + (TG)n Simple_repeat Simple_repeat 1 42 0 326 220 180 20 chr2 158346 158398 -253098185 + LTR52 LTR ERVL 169 397 -24 586 231 118 18 chr2 159250 159419 -253097164 + MER105 DNA DNA 1 186 -18 6378 232 63 56 chr2 159756 162766 -253093817 + L1M4b LINE L1 15 3035 -3922 231 36 0 0 chr2 162766 162794 -253093789 + (CAA)n Simple_repeat Simple_repeat 2 29 0 6378 232 63 56 chr2 162794 163671 -253092912 + L1M4b LINE L1 3035 3904 -3053 359 221 132 29 chr2 163676 163812 -253092771 + LTR16A1 LTR ERVL 296 445 -12 222 196 22 0 chr2 163823 163869 -253092714 + MIR SINE MIR 70 116 -146 247 282 155 0 chr2 164297 164400 -253092183 + L1ME LINE L1 5532 5650 -471 21 36 0 0 chr2 164572 164600 -253091983 + AT_rich Low_complexity Low_complexity 1 28 0 285 300 17 33 chr2 165443 165563 -253091020 + MER20 DNA MER1_type 100 217 -2 973 149 6 6 chr2 165732 165907 -253090676 + L1MB2 LINE L1 5288 5462 -721 3651 159 88 45 chr2 165923 167302 -253089281 - pTR5 LTR ERV1 -23 1683 31 1118 227 28 18 chr2 167305 167587 -253088996 + L1MB2 LINE L1 5885 6169 -2 246 128 0 0 chr2 167796 167835 -253088748 + (T)n Simple_repeat Simple_repeat 1 39 0 1660 113 0 0 chr2 167843 168055 -253088528 - AluSg SINE Alu -98 212 1 245 270 261 0 chr2 170733 170848 -253085735 - L1M4 LINE L1 -5477 1157 1013 921 232 161 39 chr2 171339 171899 -253084684 - MER92B LTR ERV1 -8 628 1 217 266 101 0 chr2 175243 175322 -253081261 + L2 LINE L2 3210 3296 -17 200 341 103 48 chr2 175471 175597 -253080986 - L2 LINE L2 -3 3269 3137 213 315 46 8 chr2 176050 176180 -253080403 - MIR SINE MIR -119 143 9 279 236 88 54 chr2 177785 177933 -253078650 - L1MC4a LINE L1 -1424 6384 6232 1333 193 227 14 chr2 178016 178369 -253078214 + MSTA LTR MaLR 1 428 0 416 244 25 10 chr2 179009 179146 -253077437 - L1M4 LINE L1 -5924 710 14 2176 122 140 8 chr2 179541 179919 -253076664 + MSTA LTR MaLR 1 428 0 3688 112 11 53 chr2 180453 181061 -253075522 + MER4B LTR ERV1 1 583 -27 543 101 0 0 chr2 182619 182698 -253073885 + (GGAA)n Simple_repeat Simple_repeat 3 81 0 34467 55 11 14 chr2 182798 187064 -253069519 - HERV17 LTR ERV1 -4377 4249 1 6059 62 30 5 chr2 187064 187825 -253068758 - LTR17 LTR ERV1 0 780 1 1240 226 98 18 chr2 238018 238457 -253018126 + HERV3 LTR ERV1 3412 3960 -976 1587 229 60 86 chr2 238530 239028 -253017555 + HERV3 LTR ERV1 3605 4089 -782 2781 244 2 0 chr2 239128 239657 -253016926 + HERV3 LTR ERV1 1175 1704 -6722 1987 229 11 0 chr2 239756 240127 -253016456 + HERV3 LTR ERV1 1634 2008 -6418 1240 115 6 33 chr2 240127 240310 -253016273 + AluSc SINE Alu 1 178 -131 593 234 14 7 chr2 240411 240552 -253016031 - Tigger1 DNA MER2_type -2275 143 2 673 188 108 5 chr2 240565 240751 -253015832 - L1MCa LINE L1 -3950 2476 2272 752 158 68 15 chr2 240753 240886 -253015697 - AluJ SINE Alu -16 296 157 638 213 41 0 chr2 241014 241136 -253015447 - AluJ SINE Alu -140 172 46 995 175 62 42 chr2 241160 241401 -253015182 - L1MCa LINE L1 -4175 2251 2001 2017 141 0 10 chr2 241401 241699 -253014884 + AluY SINE Alu 1 295 -16 995 175 62 42 chr2 241699 241765 -253014818 - L1MCa LINE L1 -4425 2001 1938 316 26 0 136 chr2 241885 242076 -253014507 + (GGGAGA)n Simple_repeat Simple_repeat 1 165 0 268 261 34 23 chr2 246201 246289 -253010294 - MLT1J2 LTR MaLR 0 450 362 324 316 24 36 chr2 246389 246557 -253010026 - MLT1J1 LTR MaLR -241 205 40 208 146 0 24 chr2 248475 248516 -253008067 + (CCCCCA)n Simple_repeat Simple_repeat 1 40 0 181 191 43 0 chr2 248793 248840 -253007743 - MIR SINE MIR -66 142 94 485 216 27 20 chr2 249115 249258 -253007325 + MSTC LTR MaLR 20 162 -203 512 244 189 11 chr2 250383 250563 -253006020 + MER20 DNA MER1_type 1 212 -7 362 283 65 62 chr2 252316 252687 -253003896 + L2 LINE L2 2941 3312 -1 4198 213 23 13 chr2 252875 254140 -253002443 + L1MB3 LINE L1 4898 6181 -2 451 299 81 15 chr2 258765 259099 -252997484 - L2 LINE L2 -734 2580 2225 26 0 0 0 chr2 259667 259693 -252996890 + AT_rich Low_complexity Low_complexity 1 26 0 343 267 114 23 chr2 260406 260537 -252996046 + Charlie8 DNA MER1_type 14 156 -2261 25 0 0 0 chr2 260761 260786 -252995797 + AT_rich Low_complexity Low_complexity 1 25 0 1873 150 0 27 chr2 260983 261276 -252995307 + AluJb SINE Alu 1 285 -27 208 237 26 35 chr2 261325 261439 -252995144 + A-rich Low_complexity Low_complexity 3 115 0 296 162 68 14 chr2 261482 261556 -252995027 - MER116 DNA Mariner -2 78 1 762 240 55 87 chr2 261777 262124 -252994459 - MLT1A1 LTR MaLR 0 365 29 4585 188 46 23 chr2 262126 262841 -252993742 - L1 LINE L1 -841 5305 4608 1796 96 46 0 chr2 262841 263081 -252993502 - AluY SINE Alu -20 291 41 4585 188 46 23 chr2 263081 263201 -252993382 - L1 LINE L1 -1538 4608 4492 4987 60 3 8 chr2 263201 263830 -252992753 - L1PA8 LINE L1 -1 6171 5546 4585 188 46 23 chr2 263830 264024 -252992559 - L1 LINE L1 -1654 4492 4248 324 0 0 0 chr2 264024 264060 -252992523 + (TG)n Simple_repeat Simple_repeat 2 37 0 4585 188 46 23 chr2 264060 264096 -252992487 - L1 LINE L1 -1898 4248 4214 1512 161 59 3 chr2 264232 264554 -252992029 - L1 LINE L1 -2437 3709 3370 983 267 64 20 chr2 264563 264953 -252991630 - L1 LINE L1 -3090 3056 2650 185 229 82 0 chr2 265213 265274 -252991309 + MIR SINE MIR 47 112 -150 1554 199 7 34 chr2 266416 266712 -252989871 - AluJb SINE Alu -24 288 1 10643 93 68 11 chr2 267450 269476 -252987107 - L1PBa LINE L1 -3938 2925 634 1295 152 0 0 chr2 269476 269674 -252986909 - L1PBa LINE L1 -6663 200 3 261 83 0 0 chr2 270913 270949 -252985634 + (TA)n Simple_repeat Simple_repeat 1 36 0 470 228 179 55 chr2 271804 272062 -252984521 - MLT1H LTR MaLR 0 549 314 1277 239 38 11 chr2 272147 272591 -252983992 + L1ME2 LINE L1 2121 2576 -3570 5331 255 91 37 chr2 272600 274409 -252982174 + L1ME2 LINE L1 2835 4544 -1620 6107 23 0 10 chr2 274409 275116 -252981467 + L1PA3 LINE L1 5452 6151 -4 5331 255 91 37 chr2 275116 276363 -252980220 + L1ME2 LINE L1 4544 6064 -100 1333 241 95 28 chr2 276363 276836 -252979747 + MLT1D LTR MaLR 1 505 0 5331 255 91 37 chr2 276836 276905 -252979678 + L1ME2 LINE L1 6064 6128 -36 2525 117 14 3 chr2 277256 277616 -252978967 + THE1B LTR MaLR 1 364 0 9795 116 38 38 chr2 277616 279196 -252977387 + THE1B-int LTR MaLR 1 1580 0 2239 124 74 0 chr2 279196 279535 -252977048 + THE1B LTR MaLR 1 364 0 225 203 72 29 chr2 279671 279740 -252976843 + L1ME2 LINE L1 6057 6128 -36 21 57 0 0 chr2 279851 279886 -252976697 + AT_rich Low_complexity Low_complexity 1 35 0 23 0 0 0 chr2 281586 281609 -252974974 + AT_rich Low_complexity Low_complexity 1 23 0 1171 125 0 0 chr2 281843 282003 -252974580 - AluSg/x SINE Alu -16 294 135 1169 284 51 19 chr2 282403 282928 -252973655 + HAL1 LINE L1 799 1340 -1167 298 287 81 23 chr2 283179 283353 -252973230 + HAL1 LINE L1 2019 2202 -305 995 251 95 10 chr2 283614 283909 -252972674 + MER82 DNA MER2_type 306 625 -28 513 209 98 20 chr2 284414 284567 -252972016 - L1MB5 LINE L1 0 6174 6010 569 278 17 26 chr2 284575 284805 -252971778 + HAL1 LINE L1 1019 1246 -1261 4550 204 73 75 chr2 284905 286459 -252970124 - L1M4 LINE L1 -848 5298 3749 242 299 0 31 chr2 287571 287668 -252968915 + CT-rich Low_complexity Low_complexity 3 96 0 1755 157 14 17 chr2 288860 289154 -252967429 + AluJo SINE Alu 2 294 -18 5132 163 31 31 chr2 289478 290192 -252966391 - L1MA8 LINE L1 -4 6287 5573 2139 125 0 0 chr2 290192 290489 -252966094 + AluSx SINE Alu 1 297 -15 5132 163 31 31 chr2 290489 291022 -252965561 - L1MA8 LINE L1 -717 5574 5042 2341 186 28 24 chr2 291023 291491 -252965092 + L1MA8 LINE L1 4567 5036 -1110 21 0 0 0 chr2 291499 291520 -252965063 + AT_rich Low_complexity Low_complexity 1 21 0 1025 190 22 0 chr2 291568 291747 -252964836 - AluJb SINE Alu -3 309 127 809 278 69 39 chr2 292199 292606 -252963977 + L1ME4a LINE L1 5502 5920 -201 198 171 0 0 chr2 292841 292882 -252963701 + (TTA)n Simple_repeat Simple_repeat 2 42 0 358 238 48 55 chr2 293483 293671 -252962912 - MLT1A2 LTR MaLR -181 209 7 3045 148 30 0 chr2 294242 294748 -252961835 - L1MA4A LINE L1 0 6303 5783 249 266 0 0 chr2 294748 294842 -252961741 + (TG)n Simple_repeat Simple_repeat 2 95 0 1063 156 14 46 chr2 294845 295063 -252961520 - L1MA4A LINE L1 -514 5789 5579 260 245 21 32 chr2 296262 296356 -252960227 + L1ME3A LINE L1 5348 5440 -681 2168 144 69 15 chr2 297377 297781 -252958802 + MSTA LTR MaLR 1 426 -2 256 343 35 47 chr2 299652 299993 -252956590 + L1ME3A LINE L1 5609 5945 -225 239 261 14 0 chr2 300345 300414 -252956169 - MER5A DNA MER1_type -84 105 36 227 270 0 0 chr2 300508 300571 -252956012 + L1P LINE L1 4940 5002 -1144 703 271 171 39 chr2 300776 301395 -252955188 + L1MC4a LINE L1 5267 5967 -1841 1512 233 30 30 chr2 301535 301995 -252954588 - MLT1C LTR MaLR -2 465 6 333 194 32 0 chr2 302070 302132 -252954451 - AluJ/FLAM SINE Alu -216 86 23 531 256 70 44 chr2 302719 302989 -252953594 - MER97a DNA MER1_type? -16 878 602 845 106 12 32 chr2 302991 303235 -252953348 + (TTTC)n Simple_repeat Simple_repeat 1 239 0 722 167 13 51 chr2 303263 303419 -252953164 - FRAM SINE Alu 0 176 27 721 246 99 9 chr2 303463 303695 -252952888 - MER97b DNA MER1_type? -780 273 21 276 30 0 0 chr2 304051 304084 -252952499 + (TTA)n Simple_repeat Simple_repeat 2 34 0 181 211 0 0 chr2 305994 306032 -252950551 - MIR SINE MIR -67 141 104 669 213 35 0 chr2 306157 306298 -252950285 + MER20 DNA MER1_type 5 150 -69 440 247 283 11 chr2 306303 306586 -252949997 - MER57A LTR ERV1 -2 401 42 198 407 12 0 chr2 307325 307406 -252949177 + L2 LINE L2 3187 3268 -4 1267 191 100 16 chr2 308598 308918 -252947665 + MLT2C1 LTR ERVL 3 349 -48 467 182 30 0 chr2 310227 310326 -252946257 - MLT2C1 LTR ERVL -295 102 1 444 206 178 14 chr2 312679 312825 -252943758 - MER21B LTR ERV1 -365 498 329 392 51 0 17 chr2 317545 317604 -252938979 + L1PA6 LINE L1 6097 6154 0 186 289 0 0 chr2 318100 318152 -252938431 + L2 LINE L2 3262 3313 0 26 0 0 0 chr2 319458 319484 -252937099 + AT_rich Low_complexity Low_complexity 1 26 0 3290 145 6 15 chr2 320157 320687 -252935896 - MER1A DNA MER1_type -2 525 1 1670 195 33 0 chr2 322396 322698 -252933885 - AluJo SINE Alu 0 312 1 2489 111 45 0 chr2 324734 325093 -252931490 - THE1C LTR MaLR 0 375 1 321 303 82 65 chr2 326132 326485 -252930098 + HAL1b LINE L1 324 682 -666 402 276 77 7 chr2 326946 327146 -252929437 + L1M4 LINE L1 4061 4274 -1872 2310 185 18 25 chr2 327173 327410 -252929173 - Tigger2 DNA MER2_type 0 2718 2484 2527 60 0 3 chr2 327410 327711 -252928872 + AluY SINE Alu 1 300 -11 2310 185 18 25 chr2 327711 327922 -252928661 - Tigger2 DNA MER2_type -234 2484 2273 450 159 0 0 chr2 327912 327981 -252928602 - Tigger2 DNA MER2_type -2649 69 1 * 425 337 101 45 chr2 328147 328681 -252927902 - L1MEd LINE L1 -5003 1116 553 2090 181 37 16 chr2 329219 329655 -252926928 + MER65A LTR ERV1 1 445 0 2610 64 0 0 chr2 334654 334965 -252921618 - AluY SINE Alu 0 311 1 210 359 41 14 chr2 335260 335405 -252921178 - MIR SINE MIR -27 235 87 27 0 0 0 chr2 337645 337672 -252918911 + AT_rich Low_complexity Low_complexity 1 27 0 339 286 97 10 chr2 339387 339583 -252917000 + L1MDa LINE L1 188 400 -6140 725 219 38 50 chr2 340176 340414 -252916169 + L1MDa LINE L1 1048 1282 -5261 721 241 66 38 chr2 340425 340744 -252915839 - L1MDa LINE L1 -4344 2196 1869 356 69 0 52 chr2 340766 340824 -252915759 + Alu SINE Alu 248 302 0 305 313 91 0 chr2 340869 340968 -252915615 + L1MDa LINE L1 2091 2198 -4342 1044 98 0 0 chr2 341068 341211 -252915372 - L1P4 LINE L1 -449 5719 5577 887 102 0 0 chr2 341214 341352 -252915231 + L1P4 LINE L1 5410 5547 -621 246 277 0 15 chr2 341770 341835 -252914748 + CT-rich Low_complexity Low_complexity 5 68 0 631 288 245 8 chr2 343194 343725 -252912858 + L2 LINE L2 1294 1950 -1364 386 298 0 10 chr2 345791 345895 -252910688 + (CGTG)n Simple_repeat Simple_repeat 1 103 0 351 286 0 0 chr2 345909 346087 -252910496 + (TG)n Simple_repeat Simple_repeat 1 178 0 320 280 126 14 chr2 346448 346591 -252909992 + MIR SINE MIR 104 262 0 2074 116 7 0 chr2 347018 347312 -252909271 + AluSq SINE Alu 4 299 -14 248 305 107 15 chr2 347415 347546 -252909037 - MIR SINE MIR -89 173 31 352 237 13 0 chr2 348968 349120 -252907463 + (TG)n Simple_repeat Simple_repeat 1 154 0 627 188 0 18 chr2 351291 351456 -252905127 + CT-rich Low_complexity Low_complexity 1 162 0 200 300 83 0 chr2 351621 351681 -252904902 - L2 LINE L2 0 3272 3208 356 69 0 52 chr2 352545 352603 -252903980 + Alu SINE Alu 248 302 0 1654 233 43 31 chr2 352648 353435 -252903148 + L1MD1 LINE L1 2091 2890 -3650 836 148 32 0 chr2 353435 353590 -252902993 + L1MB2 LINE L1 6009 6168 -3 1654 233 43 31 chr2 353590 353717 -252902866 + L1MD1 LINE L1 2890 3014 -3526 2828 128 12 16 chr2 353758 353924 -252902659 - MSTA LTR MaLR 0 428 263 2884 107 81 2 chr2 353924 354303 -252902280 + MLT2A2 LTR ERVL 1 418 -35 519 17 0 0 chr2 354303 354363 -252902220 + (TA)n Simple_repeat Simple_repeat 2 61 0 2884 107 81 2 chr2 354363 354403 -252902180 + MLT2A2 LTR ERVL 418 453 0 2828 128 12 16 chr2 354403 354666 -252901917 - MSTA LTR MaLR -165 263 1 1906 293 108 11 chr2 354666 356049 -252900534 + L1MD1 LINE L1 3050 4579 -1961 594 120 40 0 chr2 356049 356149 -252900434 + MLT1B LTR MaLR 1 104 -286 300 295 0 42 chr2 356178 356273 -252900310 - Tigger7 DNA MER2_type -8 2479 2389 * 1210 238 15 8 chr2 356271 356536 -252900047 - Tigger7 DNA MER2_type -466 267 1 * 1302 161 25 84 chr2 356536 356846 -252899737 + MLT1B LTR MaLR 100 390 0 2005 270 36 8 chr2 356846 357568 -252899015 + L1MD1 LINE L1 4575 5316 -1224 2040 237 63 38 chr2 357578 358511 -252898072 + L1MD1 LINE L1 5358 6390 -246 267 103 0 0 chr2 358511 358550 -252898033 + (CATATA)n Simple_repeat Simple_repeat 2 40 0 2040 237 63 38 chr2 358550 358804 -252897779 + L1MD1 LINE L1 6390 6636 0 426 368 96 15 chr2 358965 359237 -252897346 + HAL1 LINE L1 32 325 -2182 475 256 144 6 chr2 359298 359458 -252897125 + MER5A DNA MER1_type 8 189 0 247 326 259 0 chr2 359554 359701 -252896882 - MER5A DNA MER1_type -1 188 4 414 286 36 0 chr2 359710 359850 -252896733 - MER5B DNA MER1_type -23 155 11 323 305 55 8 chr2 359851 359979 -252896604 + HAL1 LINE L1 476 609 -1898 228 300 90 0 chr2 361387 361487 -252895096 - LTR33A LTR ERVL -14 509 401 854 275 43 39 chr2 361770 362253 -252894330 - HAL1 LINE L1 -954 1553 1069 750 163 24 36 chr2 362259 362425 -252894158 + MER53 DNA DNA 1 164 -25 720 291 171 71 chr2 362430 363206 -252893377 - HAL1 LINE L1 -1399 1108 255 2232 121 129 5 chr2 363515 363896 -252892687 - MSTA LTR MaLR 0 428 1 2390 190 95 15 chr2 365631 366178 -252890405 + LTR59 LTR ERV1 1 591 -6 370 326 62 31 chr2 366826 367050 -252889533 - L3 LINE CR1 -730 847 617 225 188 42 0 chr2 367598 367646 -252888937 + MLT1I LTR MaLR 320 369 -40 221 321 107 13 chr2 368983 369142 -252887441 + MIR SINE MIR 21 194 -68 390 226 0 0 chr2 369337 369443 -252887140 + (TG)n Simple_repeat Simple_repeat 1 106 0 2650 214 97 6 chr2 369559 370196 -252886387 + MER44D DNA MER2_type 2 696 -9 192 306 0 0 chr2 370399 370448 -252886135 + L2 LINE L2 3261 3309 -4 183 129 0 0 chr2 370805 370836 -252885747 + (TCCA)n Simple_repeat Simple_repeat 3 33 0 530 115 36 24 chr2 370853 371018 -252885565 + (TCTA)n Simple_repeat Simple_repeat 4 170 0 21 0 0 0 chr2 372629 372650 -252883933 + AT_rich Low_complexity Low_complexity 1 21 0 485 121 77 0 chr2 373047 373138 -252883445 - L1PA13 LINE L1 0 6163 6066 195 375 0 0 chr2 373631 373695 -252882888 + L2 LINE L2 3206 3269 -3 282 29 0 0 chr2 373775 373810 -252882773 + (TTTTG)n Simple_repeat Simple_repeat 2 36 0 292 319 113 12 chr2 375378 375538 -252881045 + MER5A DNA MER1_type 1 176 -13 296 336 64 0 chr2 375556 375681 -252880902 - L3 LINE CR1 -156 1421 1289 2443 174 54 19 chr2 377179 377645 -252878938 + MER49 LTR ERV1 441 922 -1 1019 285 67 86 chr2 379159 380355 -252876228 + L1MEc LINE L1 1309 2630 -3933 2278 212 19 24 chr2 380361 380542 -252876041 + L1 LINE L1 4695 4875 -1271 3418 82 14 0 chr2 380542 380980 -252875603 + MLT2A1 LTR ERVL 1 444 0 2278 212 19 24 chr2 380980 381373 -252875210 + L1 LINE L1 4875 5266 -880 1621 166 65 9 chr2 381473 381798 -252874785 - MER49 LTR ERV1 -580 343 1 198 103 0 0 chr2 382861 382890 -252873693 + (TG)n Simple_repeat Simple_repeat 1 29 0 183 361 24 0 chr2 384045 384128 -252872455 + MIR SINE MIR 26 110 -152 352 265 66 22 chr2 385857 385993 -252870590 - L1ME4a LINE L1 -5 6116 5975 245 304 173 20 chr2 386162 386520 -252870063 - L1ME4a LINE L1 -382 5739 5327 40 67 0 0 chr2 386520 386595 -252869988 + AT_rich Low_complexity Low_complexity 1 75 0 24 32 0 0 chr2 387236 387267 -252869316 + AT_rich Low_complexity Low_complexity 1 31 0 601 307 116 59 chr2 387366 387937 -252868646 + HAL1b LINE L1 567 902 -944 344 331 180 0 chr2 387938 388110 -252868473 + HAL1b LINE L1 939 1141 -705 702 260 83 56 chr2 388202 388541 -252868042 + L1M4 LINE L1 2932 3279 -2867 398 328 43 14 chr2 388773 389194 -252867389 + L1M4 LINE L1 4724 5156 -990 2962 253 59 30 chr2 389258 390347 -252866236 + L1MB7 LINE L1 382 1501 -5041 1260 216 88 15 chr2 390347 390676 -252865907 - MLT1A1 LTR MaLR -3 362 10 1626 241 50 8 chr2 390694 391076 -252865507 - MLT1A1-int LTR MaLR -8 1727 1330 418 174 0 0 chr2 391244 391313 -252865270 - MLT1A1-int LTR MaLR -988 747 679 2788 206 16 21 chr2 391445 392026 -252864557 - MLT1A1-int LTR MaLR -1078 657 80 621 247 70 0 chr2 392128 392314 -252864269 + L1MB7 LINE L1 5153 5351 -1293 1699 227 118 12 chr2 392328 392830 -252863753 + L1MB7 LINE L1 6055 6609 -73 4926 208 25 6 chr2 392875 393963 -252862620 + L1PA15 LINE L1 1281 2399 -4398 * 5045 164 37 25 chr2 393952 395681 -252860902 + L1PA15 LINE L1 5082 6816 0 276 125 0 54 chr2 395695 395751 -252860832 + L1MB8 LINE L1 6125 6177 -1 2089 108 0 0 chr2 395759 396047 -252860536 + AluSg SINE Alu 1 288 -22 454 197 57 16 chr2 396055 396177 -252860406 + L1MC4a LINE L1 5365 5491 -2317 1039 270 48 64 chr2 396294 396809 -252859774 + L1MC4a LINE L1 5481 5987 -1821 365 278 81 73 chr2 396987 397260 -252859323 + L1MC4a LINE L1 6166 6440 -1368 294 165 18 49 chr2 397876 398040 -252858543 + GA-rich Low_complexity Low_complexity 2 160 0 259 273 112 56 chr2 398892 399053 -252857530 - L2 LINE L2 -18 3295 3126 443 272 180 22 chr2 399163 399663 -252856920 - L2 LINE L2 -338 2976 2398 340 231 204 0 chr2 400035 400143 -252856440 - L2 LINE L2 -908 2406 2277 48 0 0 0 chr2 401303 401351 -252855232 + AT_rich Low_complexity Low_complexity 1 48 0 699 219 44 61 chr2 401916 402144 -252854439 - L1MC1 LINE L1 0 6333 6110 23 33 0 0 chr2 402517 402547 -252854036 + AT_rich Low_complexity Low_complexity 1 30 0 384 121 0 0 chr2 402572 402630 -252853953 - MADE1 DNA Mariner -2 78 21 185 367 52 29 chr2 404700 404910 -252851673 + L2 LINE L2 2107 2321 -993 184 235 62 49 chr2 407269 407350 -252849233 + L3b LINE CR1 1243 1324 -259 1180 203 37 37 chr2 410255 410365 -252846218 - L1MC2 LINE L1 -1 6343 6234 2270 92 0 0 chr2 410365 410668 -252845915 - AluY SINE Alu -8 303 1 1180 203 37 37 chr2 410668 410878 -252845705 - L1MC2 LINE L1 -109 6235 6023 * 3474 218 121 38 chr2 410875 411742 -252844841 - L1MCb LINE L1 -4509 2055 1261 2009 110 0 7 chr2 411742 412024 -252844559 + AluSx SINE Alu 1 280 -32 351 0 0 0 chr2 412026 412065 -252844518 + (TAAA)n Simple_repeat Simple_repeat 3 41 0 3474 218 121 38 chr2 412065 412840 -252843743 - L1MCb LINE L1 -5303 1261 216 2579 128 5 3 chr2 412840 413214 -252843369 + THE1C LTR MaLR 1 375 0 3474 218 121 38 chr2 413214 413448 -252843135 - L1MCb LINE L1 -6348 216 3 2056 107 0 0 chr2 415314 415618 -252840965 - AluSg SINE Alu 0 304 1 203 402 20 10 chr2 415630 415732 -252840851 + MIR SINE MIR 18 120 -142 199 261 204 23 chr2 416217 416305 -252840278 + L2 LINE L2 3209 3312 -1 204 280 0 0 chr2 416415 416465 -252840118 + L2 LINE L2 3229 3278 -35 406 266 129 0 chr2 418012 418136 -252838447 - MIR SINE MIR -5 257 118 226 307 118 24 chr2 419404 419531 -252837052 - MIR3 SINE MIR -67 141 3 359 229 72 0 chr2 420424 420507 -252836076 + MER58B DNA MER1_type 237 325 -16 397 55 58 58 chr2 421990 422343 -252834240 + (TG)n Simple_repeat Simple_repeat 1 353 0 483 45 62 57 chr2 422419 422596 -252833987 + (TG)n Simple_repeat Simple_repeat 1 178 0 218 266 112 71 chr2 422981 423150 -252833433 + MIR SINE MIR 8 183 -79 710 307 82 46 chr2 425585 426378 -252830205 - L1MEc LINE L1 -3537 2678 1895 263 344 67 5 chr2 426413 426608 -252829975 - L1MEc LINE L1 -4596 1800 1594 181 43 0 0 chr2 429642 429665 -252826918 - MIR SINE MIR -117 145 123 233 220 20 0 chr2 431715 431765 -252824818 + L3 LINE CR1 1242 1292 -285 201 372 73 3 chr2 433289 433467 -252823116 + MIR SINE MIR 12 203 -59 8355 143 39 6 chr2 434475 434536 -252822047 + L1MA3 LINE L1 3622 3680 -2625 528 59 0 0 chr2 434536 434604 -252821979 + (GAA)n Simple_repeat Simple_repeat 2 69 0 8355 143 39 6 chr2 434604 437136 -252819447 + L1MA3 LINE L1 3680 6305 0 252 379 91 26 chr2 439057 439321 -252817262 - L2 LINE L2 -27 3245 2965 261 325 78 48 chr2 439619 439887 -252816696 - L2 LINE L2 -489 2825 2550 336 290 6 56 chr2 439922 440084 -252816499 - L1ME2 LINE L1 -9 6155 6002 * 621 333 47 15 chr2 440074 440162 -252816421 - L1M4 LINE L1 -2479 3667 3583 1682 184 42 0 chr2 440162 440450 -252816133 - AluJb SINE Alu -12 300 1 621 333 47 15 chr2 440450 440764 -252815819 - L1M4 LINE L1 -2563 3583 3252 * 2217 250 51 22 chr2 440746 441577 -252815006 - L1MC3 LINE L1 -749 5397 5170 699 284 59 6 chr2 441639 441977 -252814606 - L1MC3 LINE L1 -2661 3485 3130 620 144 68 7 chr2 441984 442130 -252814453 + L1MA7 LINE L1 6130 6284 -7 319 319 42 0 chr2 442135 442301 -252814282 + L1ME3A LINE L1 5107 5279 -867 693 302 99 29 chr2 442436 442993 -252813590 + L1ME3A LINE L1 5354 5949 -221 328 203 27 0 chr2 442994 443068 -252813515 + L1MA8 LINE L1 6209 6284 -7 2174 108 0 51 chr2 443109 443425 -252813158 - AluSg SINE Alu -10 300 1 373 303 128 0 chr2 444137 444325 -252812258 + MER58C DNA MER1_type 1 212 -3 379 314 78 31 chr2 444971 445264 -252811319 + L1MC/D LINE L1 5501 5807 -2001 209 233 0 0 chr2 448477 448520 -252808063 + (TA)n Simple_repeat Simple_repeat 1 43 0 242 280 86 0 chr2 449199 449292 -252807291 + MER3 DNA MER1_type 79 179 -30 232 337 53 63 chr2 450223 450413 -252806170 - MIR SINE MIR -50 212 25 184 146 24 49 chr2 450781 450822 -252805761 + MER5B DNA MER1_type 124 163 -15 228 69 92 11 chr2 451573 451660 -252804923 + (TG)n Simple_repeat Simple_repeat 2 95 0 2545 111 14 0 chr2 452537 452896 -252803687 + THE1B LTR MaLR 1 364 0 663 300 55 40 chr2 454626 455026 -252801557 + MLT2D LTR ERVL 9 414 0 1606 201 57 52 chr2 458352 458759 -252797824 + LTR2 LTR ERV1 41 449 0 225 0 0 0 chr2 462723 462748 -252793835 + (T)n Simple_repeat Simple_repeat 1 25 0 371 329 150 31 chr2 462848 463207 -252793376 - L1M4 LINE L1 -1097 5049 4648 684 287 59 53 chr2 463253 463374 -252793209 - L1M4 LINE L1 -1635 4511 4392 6207 58 17 18 chr2 463374 464155 -252792428 - LTR17 LTR ERV1 0 780 1 684 287 59 53 chr2 464155 464709 -252791874 - L1M4 LINE L1 -1754 4392 3832 531 276 104 21 chr2 464705 465089 -252791494 - L1M4 LINE L1 -3529 2617 2202 * 3251 110 69 6 chr2 465767 466248 -252790335 + MER9 LTR ERVK 1 511 0 185 371 0 0 chr2 467320 467382 -252789201 + L2 LINE L2 3005 3066 -206 23 0 0 0 chr2 469252 469275 -252787308 + AT_rich Low_complexity Low_complexity 1 23 0 972 124 0 0 chr2 470235 470364 -252786219 + AluSq/x SINE Alu 1 129 -183 416 296 85 0 chr2 472381 472570 -252784013 - MER92B LTR ERV1 -421 215 11 2773 141 20 50 chr2 472668 473229 -252783354 - Tigger3(Golem) DNA MER2_type -1 3028 2485 261 182 0 0 chr2 473330 473385 -252783198 + GA-rich Low_complexity Low_complexity 4 58 0 704 184 101 10 chr2 473475 473682 -252782901 - MER33 DNA MER1_type -48 276 51 2351 92 0 13 chr2 474192 474496 -252782087 + AluSx SINE Alu 1 300 -12 21 36 0 0 chr2 475850 475878 -252780705 + GC_rich Low_complexity Low_complexity 1 28 0 195 69 0 0 chr2 475904 475933 -252780650 + (CGGGG)n Simple_repeat Simple_repeat 5 33 0 409 247 54 75 chr2 479866 480052 -252776531 + MER58C DNA MER1_type 28 209 -6 591 129 0 0 chr2 480901 480986 -252775597 + AluSg/x SINE Alu 208 292 -18 303 288 55 43 chr2 481834 481997 -252774586 - L2 LINE L2 -491 2823 2659 288 295 98 16 chr2 482048 482292 -252774291 + L1M4 LINE L1 2994 3257 -2889 24 32 0 0 chr2 482357 482388 -252774195 + AT_rich Low_complexity Low_complexity 1 31 0 426 333 56 59 chr2 482545 482833 -252773750 + L1MEc LINE L1 2099 2385 -4011 439 253 120 71 chr2 483072 483440 -252773143 - L1 LINE L1 -3126 3020 2635 282 260 153 45 chr2 483605 483913 -252772670 + L1M4 LINE L1 3884 4224 -1922 460 346 93 12 chr2 483962 484219 -252772364 + L1M4 LINE L1 4483 4760 -1386 306 129 32 32 chr2 484473 484597 -252771986 + (TTAA)n Simple_repeat Simple_repeat 4 127 0 266 332 45 31 chr2 484751 485040 -252771543 + MER97c DNA MER1_type? 781 1073 -17 246 141 54 11 chr2 485217 485309 -252771274 + (TAGA)n Simple_repeat Simple_repeat 2 97 0 350 137 99 19 chr2 485335 485496 -252771087 + (TAGA)n Simple_repeat Simple_repeat 2 175 0 195 119 34 34 chr2 485569 485628 -252770955 + (TAGA)n Simple_repeat Simple_repeat 3 61 0 2054 156 6 22 chr2 488738 489059 -252767524 - MER1B DNA MER1_type -23 316 1 860 203 183 40 chr2 489059 489308 -252767275 - Tigger3(Golem) DNA MER2_type -2741 288 4 218 306 9 4 chr2 490453 490689 -252765894 + (CA)n Simple_repeat Simple_repeat 1 237 0 269 309 6 0 chr2 490741 490916 -252765667 + (CATA)n Simple_repeat Simple_repeat 2 177 0 434 263 6 0 chr2 490932 491092 -252765491 + (CA)n Simple_repeat Simple_repeat 2 162 0 307 250 14 0 chr2 492699 492771 -252763812 - MER69 DNA AcHobo 0 2526 2454 209 301 88 18 chr2 496509 496622 -252759961 - MIR SINE MIR -60 148 28 1378 139 8 36 chr2 496622 496874 -252759709 + AluJb SINE Alu 58 302 -10 340 270 63 8 chr2 497081 497207 -252759376 + MLT1I LTR MaLR 270 402 -7 864 206 73 5 chr2 501418 501636 -252754947 - L1MA5A LINE L1 -1 6296 6064 253 319 66 58 chr2 502277 502491 -252754092 - L1M4 LINE L1 -1548 4598 4387 2490 48 0 0 chr2 502491 502802 -252753781 + AluYa5 SINE Alu 1 311 0 253 319 66 58 chr2 502802 503039 -252753544 - L1M4 LINE L1 -1759 4387 4143 538 262 117 41 chr2 504425 504917 -252751666 - L1MDa LINE L1 -4511 2029 1543 745 283 125 69 chr2 505150 505758 -252750825 - L1MDa LINE L1 -5426 1104 463 197 305 84 21 chr2 505794 505889 -252750694 - MIR SINE MIR -91 171 71 2695 101 3 3 chr2 506200 506575 -252750008 + THE1C LTR MaLR 1 375 0 1567 234 39 8 chr2 507492 507856 -252748727 - MLT1B LTR MaLR -15 375 1 281 274 89 24 chr2 508033 508157 -252748426 + MIR SINE MIR 117 248 -14 1618 139 204 38 chr2 508355 508722 -252747861 + MSTA LTR MaLR 1 428 0 7593 171 40 67 chr2 508722 510417 -252746166 + THE1B-int LTR MaLR 1 1649 -2 1698 161 75 32 chr2 510425 510772 -252745811 + THE1B LTR MaLR 1 362 -2 198 0 0 0 chr2 511225 511247 -252745336 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 884 222 13 3 chr2 511679 511994 -252744589 - MSTD LTR MaLR 0 396 1 403 233 78 0 chr2 512519 512635 -252743948 + MLT1D LTR MaLR 381 505 0 1927 110 10 52 chr2 512759 513067 -252743516 + AluSg SINE Alu 1 295 -15 188 132 0 26 chr2 516398 516436 -252740147 + (GAAAA)n Simple_repeat Simple_repeat 2 38 0 432 285 75 5 chr2 516863 517063 -252739520 + MER20 DNA MER1_type 6 219 0 1832 143 62 20 chr2 517738 518095 -252738488 + THE1C LTR MaLR 1 372 -3 24 32 0 0 chr2 518976 519007 -252737576 + AT_rich Low_complexity Low_complexity 1 31 0 407 307 72 23 chr2 521147 521411 -252735172 - L1ME4a LINE L1 -295 5826 5550 241 272 48 0 chr2 521482 521607 -252734976 - L1ME4a LINE L1 -2350 5458 5328 235 200 36 0 chr2 521769 521824 -252734759 - LTR40b LTR ERVL -2 460 404 281 365 11 11 chr2 523573 523751 -252732832 + (CA)n Simple_repeat Simple_repeat 2 179 0 2206 92 0 7 chr2 523926 524229 -252732354 - AluSx SINE Alu -11 301 1 2718 208 69 60 chr2 525573 526328 -252730255 - L1MC1 LINE L1 -1 6332 5571 828 151 0 0 chr2 526328 526474 -252730109 + CT-rich Low_complexity Low_complexity 3 148 0 506 190 8 0 chr2 526968 527089 -252729494 + GA-rich Low_complexity Low_complexity 3 124 0 222 37 0 0 chr2 527688 527715 -252728868 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 430 301 47 21 chr2 528439 528828 -252727755 + L1MEc LINE L1 1371 1823 -753 737 240 179 28 chr2 529046 529371 -252727212 + MLT1B LTR MaLR 1 374 -16 205 162 0 101 chr2 529475 529574 -252727009 + A-rich Low_complexity Low_complexity 2 90 0 434 281 42 32 chr2 530066 530578 -252726005 - MLT1G1 LTR MaLR -2 593 2 187 246 33 0 chr2 531053 531114 -252725469 + L2 LINE L2 3028 3090 -223 228 193 53 0 chr2 531311 531368 -252725215 - MIR SINE MIR -79 183 124 555 273 88 10 chr2 531723 531917 -252724666 - L1PB4 LINE L1 -6 6150 5942 219 264 31 92 chr2 532446 532609 -252723974 - L2 LINE L2 -52 3261 3109 584 135 19 19 chr2 534355 534459 -252722124 + L1MA4 LINE L1 6197 6300 0 214 294 29 0 chr2 539172 539240 -252717343 + CT-rich Low_complexity Low_complexity 3 72 0 346 264 36 43 chr2 539453 539476 -252717107 - L1M4 LINE L1 -3619 2527 2505 2278 188 43 8 chr2 539476 539945 -252716638 - MER66B LTR ERV1 -1 485 1 346 264 36 43 chr2 539945 540061 -252716522 - L1M4 LINE L1 -3641 2505 2389 258 248 152 41 chr2 540108 540253 -252716330 - L1P LINE L1 -3839 2307 2147 44 20 0 0 chr2 540864 540915 -252715668 + AT_rich Low_complexity Low_complexity 1 51 0 717 224 108 108 chr2 540915 541163 -252715420 - L1MC5 LINE L1 -79 7882 7635 2175 128 0 0 chr2 541163 541459 -252715124 - AluSx SINE Alu -16 296 1 717 224 108 108 chr2 541459 541847 -252714736 - L1MC5 LINE L1 -325 7636 7246 26 50 0 0 chr2 542132 542172 -252714411 + AT_rich Low_complexity Low_complexity 1 40 0 1211 166 67 9 chr2 543025 543248 -252713335 + MER46A DNA MER2_type 1 236 0 1670 221 195 44 chr2 543536 544289 -252712294 - Charlie1a DNA MER1_type -34 1421 555 273 283 146 34 chr2 544385 544618 -252711965 - Charlie1a DNA MER1_type -1054 401 143 657 236 28 34 chr2 544674 544852 -252711731 - Charlie1a DNA MER1_type -1277 178 2 239 212 26 13 chr2 544883 544991 -252711592 - L1P LINE L1 -2364 3782 3672 308 268 132 64 chr2 545615 545880 -252710703 - L1MEc LINE L1 -3188 3376 3094 214 175 35 18 chr2 546469 546526 -252710057 + (TCTCTG)n Simple_repeat Simple_repeat 3 60 0 361 296 103 57 chr2 546909 547277 -252709306 - L1MEc LINE L1 -4751 1994 1610 22 56 0 0 chr2 552715 552751 -252703832 + AT_rich Low_complexity Low_complexity 1 36 0 772 182 0 0 chr2 553847 553990 -252702593 + MER52A LTR ERV1 1613 1755 0 1818 164 125 3 chr2 554177 554536 -252702047 + MER57A LTR ERV1 1 403 0 3484 233 81 22 chr2 558138 559193 -252697390 - L1MC3 LINE L1 -166 7619 6503 2196 257 44 28 chr2 559181 559982 -252696601 - L1MCb LINE L1 -3034 3530 2717 * 1081 237 59 75 chr2 560008 560701 -252695882 - L1MCb LINE L1 -4849 1196 704 281 342 35 0 chr2 560758 560986 -252695597 + L1ME LINE L1 3340 3575 -2571 1198 94 0 0 chr2 560988 561148 -252695435 - L1PA7 LINE L1 -390 5764 5605 2959 60 5 21 chr2 561148 561546 -252695037 + L1PA7 LINE L1 5763 6158 0 896 282 119 31 chr2 561759 562642 -252693941 + L1ME LINE L1 3847 4807 -1339 589 190 0 0 chr2 562691 562812 -252693771 - L1PB1 LINE L1 -1588 4558 4438 * 5853 147 83 1 chr2 562808 563400 -252693183 + L1PB1 LINE L1 4553 5095 -1056 6075 71 84 14 chr2 563400 563474 -252693109 + L1PA8 LINE L1 5254 5321 -851 2343 92 0 38 chr2 563474 563611 -252692972 + AluSx SINE Alu 1 142 -170 3173 201 23 91 chr2 563611 564651 -252691932 - LTR5 LTR ERVK 0 969 1 2343 92 0 38 chr2 564651 564830 -252691753 + AluSx SINE Alu 142 305 -7 6075 71 84 14 chr2 564830 565610 -252690973 + L1PA8 LINE L1 5321 6168 -4 5853 147 83 1 chr2 565610 566471 -252690112 + L1PB1 LINE L1 5095 6143 -8 589 308 78 30 chr2 566834 567195 -252689388 + L1ME LINE L1 5276 5653 -509 242 285 85 8 chr2 567742 567872 -252688711 + L2 LINE L2 2154 2293 -1021 188 337 79 34 chr2 567985 568163 -252688420 + L2 LINE L2 3128 3313 0 1870 224 55 60 chr2 570247 570886 -252685697 - L1MB3 LINE L1 -14 6169 5534 303 286 7 82 chr2 571341 571488 -252685095 - L1M3 LINE L1 -586 5585 5450 1519 199 36 28 chr2 571593 571955 -252684628 + MLT1A1 LTR MaLR 1 365 0 298 333 27 0 chr2 572154 572265 -252684318 - L1MC5 LINE L1 -50 7911 7798 2264 261 72 42 chr2 572317 573392 -252683191 - L1M3 LINE L1 -2180 3966 2860 296 272 22 43 chr2 774428 774612 -252481971 + (CATA)n Simple_repeat Simple_repeat 1 180 0 257 278 23 40 chr2 774762 774938 -252481645 + (CATA)n Simple_repeat Simple_repeat 1 173 0 286 278 22 39 chr2 775096 775276 -252481307 + (CATA)n Simple_repeat Simple_repeat 1 177 0 1550 251 22 14 chr2 780020 780435 -252476148 - MLT1C LTR MaLR -14 453 36 1001 200 112 59 chr2 782191 782352 -252474231 - L1MA7 LINE L1 0 6291 6140 1611 165 7 4 chr2 782352 782624 -252473959 + AluJo SINE Alu 23 295 -17 1001 200 112 59 chr2 782624 782816 -252473767 - L1MA7 LINE L1 -151 6140 5918 458 191 62 0 chr2 784603 784730 -252471853 + MLT1C LTR MaLR 247 461 -6 228 333 78 16 chr2 784735 784864 -252471719 - MIR SINE MIR -102 160 24 224 232 0 18 chr2 785852 785908 -252470675 + GA-rich Low_complexity Low_complexity 2 56 0 195 171 49 0 chr2 785921 785962 -252470621 + L2 LINE L2 3210 3252 -20 225 368 0 0 chr2 798979 799150 -252457433 + (CAG)n Simple_repeat Simple_repeat 3 173 0 894 229 33 57 chr2 802301 802701 -252453882 + MLT2B1 LTR ERVL 1 479 -41 200 276 20 33 chr2 802723 802875 -252453708 + (TATATG)n Simple_repeat Simple_repeat 5 154 0 * 340 288 17 6 chr2 802827 803004 -252453579 + (TA)n Simple_repeat Simple_repeat 1 179 0 1791 32 0 23 chr2 804452 804669 -252451914 + AluY SINE Alu 84 295 -16 1225 264 35 5 chr2 804839 805206 -252451377 + MLT1B LTR MaLR 1 378 -12 21085 25 2 0 chr2 807416 810203 -252446380 + L1P1 LINE L1 2744 5535 -620 576 303 52 37 chr2 810353 810700 -252445883 - L1ME4a LINE L1 -243 5878 5523 2260 94 0 0 chr2 810764 811062 -252445521 - AluSg SINE Alu -12 298 1 265 286 66 0 chr2 811120 811211 -252445372 - L2 LINE L2 -3 3269 3173 2088 120 27 0 chr2 811548 811848 -252444735 - AluSx SINE Alu -4 308 1 718 256 94 12 chr2 812820 813074 -252443509 + ORSL DNA AcHobo 1 275 0 307 220 8 8 chr2 813287 813405 -252443178 + (CA)n Simple_repeat Simple_repeat 1 118 0 401 339 112 14 chr2 814000 814130 -252442453 + L1MC/D LINE L1 5249 5365 -1175 225 0 0 0 chr2 814130 814155 -252442428 + (CA)n Simple_repeat Simple_repeat 2 26 0 401 339 112 14 chr2 814155 814476 -252442107 + L1MC/D LINE L1 5365 5752 -788 23 68 0 0 chr2 814649 814693 -252441890 + AT_rich Low_complexity Low_complexity 1 44 0 14907 188 22 8 chr2 815514 818720 -252437863 - L1PB1 LINE L1 -1 6866 3553 2230 112 3 3 chr2 818720 819016 -252437567 - AluSq SINE Alu -17 296 1 14907 188 22 8 chr2 819016 821113 -252435470 - L1PB1 LINE L1 -3314 3553 1487 2225 217 39 0 chr2 821110 821604 -252434979 - L1PB1 LINE L1 -6345 518 6 * 290 286 57 26 chr2 821813 821986 -252434597 - LTR56 LTR ERV1 0 445 280 47 33 0 0 chr2 822132 822193 -252434390 + AT_rich Low_complexity Low_complexity 1 61 0 592 385 79 21 chr2 822260 822870 -252433713 - L1M4 LINE L1 -2022 4124 3480 180 0 0 0 chr2 824440 824460 -252432123 + (A)n Simple_repeat Simple_repeat 1 20 0 230 222 42 49 chr2 824460 824604 -252431979 - L1M2 LINE L1 -831 5460 5318 256 333 24 48 chr2 824974 825268 -252431315 - L1M4 LINE L1 -1311 4835 4549 4211 25 5 43 chr2 825414 825973 -252430610 + L1PA4 LINE L1 5615 6152 -3 1111 118 5 27 chr2 826050 826236 -252430347 + L1PA8A LINE L1 5950 6131 0 298 254 105 35 chr2 826734 827006 -252429577 + MER31B LTR ERV1 58 464 -2 325 267 42 48 chr2 827009 827174 -252429409 + MIR SINE MIR 33 196 -66 2284 126 0 0 chr2 829149 829458 -252427125 + AluSx SINE Alu 1 309 -3 829 275 113 24 chr2 829901 830327 -252426256 - MLT1C LTR MaLR -2 465 2 2360 89 0 23 chr2 830850 831154 -252425429 - AluSg SINE Alu -13 297 1 205 322 0 0 chr2 831942 832001 -252424582 - MIR SINE MIR -108 154 96 189 271 71 0 chr2 832163 832233 -252424350 - MER5A DNA MER1_type -83 106 32 459 196 29 22 chr2 833699 833837 -252422746 - L1MB3 LINE L1 -1 6182 6044 492 194 0 10 chr2 833837 833935 -252422648 - FLAM_C SINE Alu -16 127 31 225 0 0 0 chr2 835474 835499 -252421084 + (CCCCG)n Simple_repeat Simple_repeat 5 29 0 191 331 44 59 chr2 837604 837740 -252418843 - MIR SINE MIR -100 162 29 2451 98 0 0 chr2 839385 839691 -252416892 + AluSq SINE Alu 1 306 -7 188 288 0 45 chr2 840179 840245 -252416338 + L2 LINE L2 3207 3269 -3 2226 101 10 3 chr2 840653 840949 -252415634 - AluSg SINE Alu -11 299 2 306 0 0 0 chr2 842216 842250 -252414333 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 244 257 109 20 chr2 842257 842358 -252414225 - L2 LINE L2 -20 3252 3143 365 237 0 57 chr2 842572 842749 -252413834 + (TG)n Simple_repeat Simple_repeat 1 167 0 2395 63 7 23 chr2 844148 844448 -252412135 - AluY SINE Alu -16 295 1 1969 99 10 58 chr2 845334 845658 -252410925 - AluSq SINE Alu 0 313 4 4595 52 7 2 chr2 845818 846704 -252409879 + L1PA6 LINE L1 4972 5862 -292 2081 60 10 20 chr2 846804 847105 -252409478 + L1PA6 LINE L1 5857 6154 0 213 286 95 0 chr2 847749 847812 -252408771 + MIR SINE MIR 121 189 -73 1892 148 13 30 chr2 849027 849332 -252407251 + AluJo SINE Alu 1 300 -12 239 305 38 0 chr2 850161 850266 -252406317 - LTR16A1 LTR ERVL -348 109 1 414 0 0 0 chr2 851402 851448 -252405135 + (TG)n Simple_repeat Simple_repeat 2 47 0 2051 158 7 0 chr2 851926 852236 -252404347 + AluSx SINE Alu 1 312 0 237 83 0 0 chr2 852236 852272 -252404311 + (GGA)n Simple_repeat Simple_repeat 2 37 0 270 197 0 49 chr2 853963 854024 -252402559 + MIR SINE MIR 157 214 -48 193 212 30 106 chr2 855531 855597 -252400986 + MIR SINE MIR 87 147 -115 2470 45 0 86 chr2 856257 856594 -252399989 + AluY SINE Alu 1 308 -3 653 314 105 55 chr2 856794 857774 -252398809 + L1 LINE L1 2803 3896 -2250 715 270 51 70 chr2 857891 858261 -252398322 + MLT1D-int LTR MaLR 1004 1366 -5 1246 211 87 23 chr2 858321 858710 -252397873 + MLT1D LTR MaLR 92 505 0 181 268 89 0 chr2 858864 858920 -252397663 - MIR3 SINE MIR -52 156 96 316 309 114 11 chr2 860152 860327 -252396256 + Charlie2 DNA MER1_type 201 393 -2469 1248 262 112 26 chr2 860448 861074 -252395509 + Charlie2a DNA MER1_type 1495 2174 -688 258 292 31 46 chr2 861084 861214 -252395369 + MER94 DNA DNA 1 128 -6 526 252 47 28 chr2 861223 861477 -252395106 + Charlie2a DNA MER1_type 2182 2440 -422 21 0 0 0 chr2 862158 862179 -252394404 + AT_rich Low_complexity Low_complexity 1 21 0 230 174 130 0 chr2 865070 865116 -252391467 - MIR SINE MIR -86 176 125 404 300 25 0 chr2 865796 865956 -252390627 + (CATATA)n Simple_repeat Simple_repeat 4 167 0 2690 155 43 30 chr2 865964 866554 -252390029 - MER4B LTR ERV1 -10 769 1 231 36 0 0 chr2 866556 866584 -252389999 + (CA)n Simple_repeat Simple_repeat 2 29 0 732 265 87 16 chr2 866627 867182 -252389401 + L1ME2 LINE L1 4993 5578 -592 360 304 52 8 chr2 867272 867449 -252389134 + L1ME2 LINE L1 5881 6068 -102 784 167 0 0 chr2 870483 870615 -252385968 - FLAM_C SINE Alu 0 133 2 291 352 77 22 chr2 870763 870945 -252385638 - MIR SINE MIR -62 200 9 2192 89 101 24 chr2 871350 871688 -252384895 - THE1B LTR MaLR 0 364 1 1524 209 55 55 chr2 873623 874155 -252382428 - LTR55 LTR ERV -16 532 1 696 247 60 26 chr2 874486 874753 -252381830 - MER93b LTR ERV1 0 373 98 238 346 0 13 chr2 875932 876010 -252380573 - MIR SINE MIR -182 80 4 290 288 156 58 chr2 876325 876568 -252380015 + L2 LINE L2 2848 3114 -158 2535 76 0 0 chr2 878338 878642 -252377941 + AluY SINE Alu 1 304 -7 306 260 58 48 chr2 880199 880303 -252376280 - L2 LINE L2 -4 3268 3164 307 66 0 152 chr2 880699 881052 -252375531 + (CACCT)n Simple_repeat Simple_repeat 1 299 0 684 186 49 27 chr2 881878 882061 -252374522 + L1MA9 LINE L1 6088 6274 -38 2214 216 9 2 chr2 882087 882508 -252374075 - MSTB LTR MaLR -2 424 1 8805 198 15 5 chr2 882508 884142 -252372441 - MSTB-int LTR MaLR 0 1651 1 1616 181 13 9 chr2 884142 884457 -252372126 - MSTB LTR MaLR 0 426 111 583 237 30 6 chr2 884568 884737 -252371846 - LTR40b LTR ERVL -1 461 289 274 338 55 5 chr2 886313 886514 -252370069 + LTR40b LTR ERVL 152 362 -100 206 322 115 0 chr2 887912 887999 -252368584 + L2 LINE L2 3152 3248 -24 227 228 70 0 chr2 888409 888466 -252368117 + L2 LINE L2 3188 3248 -24 190 271 114 0 chr2 888805 888875 -252367708 + L2 LINE L2 3235 3312 -1 2902 136 160 9 chr2 889041 889571 -252367012 + MER4B LTR ERV1 1 610 0 710 296 67 63 chr2 893412 893932 -252362651 - MER34B LTR ERV1 0 565 44 1917 133 7 13 chr2 895045 895347 -252361236 - AluSx SINE Alu 0 312 13 699 268 95 13 chr2 901424 901805 -252354778 + MLT1D LTR MaLR 47 505 0 1448 153 71 124 chr2 903079 903530 -252353053 - L1MA9 LINE L1 -5 6307 5881 189 171 0 0 chr2 903530 903565 -252353018 + (TG)n Simple_repeat Simple_repeat 1 35 0 455 302 39 42 chr2 903619 903904 -252352679 + L1MD3 LINE L1 7697 7980 -15 613 216 6 17 chr2 907854 908035 -252348548 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 1983 181 43 5 chr2 908201 908576 -252348007 - MLT1B LTR MaLR -1 389 1 422 283 112 42 chr2 909818 910104 -252346479 + L1MC/D LINE L1 5304 5609 -750 2005 128 41 49 chr2 910116 910483 -252346100 + THE1B LTR MaLR 1 364 0 247 274 152 18 chr2 911239 911403 -252345180 - LTR16A LTR ERVL -17 433 248 432 237 61 23 chr2 911453 911584 -252344999 + MER93b LTR ERV1 17 152 -221 391 214 10 10 chr2 911660 911763 -252344820 + MER57A LTR ERV1 301 403 0 500 150 0 0 chr2 912373 912453 -252344130 - AluS SINE Alu -6 304 225 1051 231 77 19 chr2 912941 913253 -252343330 + MER44D DNA MER2_type 10 609 0 256 239 45 0 chr2 915466 915533 -252341050 - MIR SINE MIR -74 188 119 2460 83 5 117 chr2 916582 916992 -252339591 - THE1B LTR MaLR 0 364 1 24 53 0 0 chr2 917029 917067 -252339516 + AT_rich Low_complexity Low_complexity 1 38 0 523 269 42 0 chr2 917770 917937 -252338646 - MER45A DNA AcHobo -4 174 1 1999 163 77 27 chr2 919171 919575 -252337008 + MSTA LTR MaLR 1 424 -4 16215 61 9 18 chr2 919695 922571 -252334012 + L1PA6 LINE L1 3249 6154 0 359 275 101 20 chr2 922999 923148 -252333435 - MIR SINE MIR -2 260 100 377 155 71 12 chr2 923197 923281 -252333302 + MER110A LTR ERV1 82 170 -298 43408 52 5 1 chr2 923743 929858 -252326725 + L1PA5 LINE L1 11 6147 -7 322 276 26 0 chr2 930660 930736 -252325847 - MIR SINE MIR -68 194 117 1036 160 50 13 chr2 930998 931212 -252325371 + MSTA LTR MaLR 2 214 -141 2222 63 43 0 chr2 931212 931515 -252325068 - L1P LINE L1 -779 5367 5052 653 67 0 2 chr2 931514 931607 -252324976 + L1PA7 LINE L1 6051 6159 -9 * 1358 153 38 13 chr2 931617 931852 -252324731 + MSTA LTR MaLR 188 428 0 2500 50 0 0 chr2 932180 932480 -252324103 - AluY SINE Alu -11 300 1 5311 133 14 5 chr2 1133113 1133971 -252122612 + Tigger1 DNA MER2_type 1553 2418 0 195 237 0 0 chr2 1135924 1135962 -252120621 + L2 LINE L2 3211 3248 -24 272 250 13 26 chr2 1139216 1139292 -252117291 + MLT1J LTR MaLR 423 497 -14 2334 81 20 0 chr2 1144199 1144497 -252112086 - AluSq SINE Alu -9 304 1 207 0 50 50 chr2 1145036 1145076 -252111507 + (CAAAAA)n Simple_repeat Simple_repeat 3 42 0 254 193 48 0 chr2 1145249 1145332 -252111251 + (CA)n Simple_repeat Simple_repeat 1 87 0 2699 58 0 0 chr2 1146840 1147151 -252109432 + AluY SINE Alu 1 311 0 263 292 23 29 chr2 1148020 1148191 -252108392 - L1ME4a LINE L1 -25 6096 5927 2155 115 16 3 chr2 1149939 1150243 -252106340 - AluSg SINE Alu -2 308 1 278 336 9 0 chr2 1153734 1153850 -252102733 + (CA)n Simple_repeat Simple_repeat 2 118 0 288 309 138 13 chr2 1154419 1154717 -252101866 + L2 LINE L2 2622 2956 -358 210 326 11 11 chr2 1154898 1154990 -252101593 + L2 LINE L2 3187 3278 -35 333 0 0 0 chr2 1155980 1156017 -252100566 + (TG)n Simple_repeat Simple_repeat 2 38 0 262 157 41 41 chr2 1158070 1158242 -252098341 + (CA)n Simple_repeat Simple_repeat 1 172 0 387 131 38 46 chr2 1158343 1158591 -252097992 + (CA)n Simple_repeat Simple_repeat 1 245 0 194 157 22 52 chr2 1158867 1159001 -252097582 + (CA)n Simple_repeat Simple_repeat 2 131 0 308 133 54 24 chr2 1159062 1159228 -252097355 + (CA)n Simple_repeat Simple_repeat 2 172 0 252 351 55 20 chr2 1159337 1159539 -252097044 + L2 LINE L2 1834 2042 -1272 594 0 0 0 chr2 1161077 1161143 -252095440 + (TC)n Simple_repeat Simple_repeat 2 67 0 246 394 42 13 chr2 1169928 1170164 -252086419 + L1MC4a LINE L1 5385 5627 -2181 1573 92 29 103 chr2 1170176 1170525 -252086058 + L1PA8 LINE L1 3104 3426 -2720 8211 93 6 3 chr2 1170525 1172525 -252084058 + L1PA8 LINE L1 4164 6166 -6 2011 123 14 0 chr2 1172608 1172884 -252083699 + AluSx SINE Alu 1 280 -32 207 0 0 0 chr2 1172884 1172907 -252083676 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 752 273 113 10 chr2 1172942 1173235 -252083348 + MER46C DNA MER2_type 1 323 -15 308 259 6 84 chr2 1173247 1173413 -252083170 + L1MC4a LINE L1 5713 5865 -1943 22 35 0 0 chr2 1173593 1173622 -252082961 + AT_rich Low_complexity Low_complexity 1 29 0 331 289 114 24 chr2 1174391 1174723 -252081860 + L1M4 LINE L1 2120 2481 -3665 1137 272 15 9 chr2 1174808 1175143 -252081440 - MER58B DNA MER1_type 0 341 5 562 304 39 5 chr2 1176178 1176382 -252080201 + Charlie8 DNA MER1_type 27 237 -2180 837 209 0 0 chr2 1177259 1177412 -252079171 - FRAM SINE Alu -12 164 12 229 262 159 37 chr2 1178335 1178442 -252078141 + MIR3 SINE MIR 39 158 -50 412 262 0 0 chr2 1181420 1181523 -252075060 + L1MB8 LINE L1 6076 6178 0 574 154 34 0 chr2 1182123 1182272 -252074311 + (TG)n Simple_repeat Simple_repeat 2 155 0 355 186 40 23 chr2 1182323 1182500 -252074083 + (TG)n Simple_repeat Simple_repeat 1 180 0 507 190 35 12 chr2 1182544 1182834 -252073749 + (TG)n Simple_repeat Simple_repeat 1 296 0 539 172 44 0 chr2 1182857 1183204 -252073379 + (TG)n Simple_repeat Simple_repeat 1 362 0 1992 121 32 24 chr2 1184155 1184495 -252072088 + MER61A LTR ERV1 1 343 0 2251 97 3 0 chr2 1185715 1186005 -252070578 + AluSq SINE Alu 1 291 -22 1508 139 15 120 chr2 1186157 1186481 -252070102 + AluJb SINE Alu 1 290 -12 196 294 134 8 chr2 1188872 1188991 -252067592 - MIR3 SINE MIR -54 154 21 471 317 87 0 chr2 1191299 1191482 -252065101 + MER58B DNA MER1_type 92 290 -51 227 231 192 46 chr2 1192203 1192333 -252064250 + MIR SINE MIR 113 261 -1 2232 124 0 3 chr2 1192558 1192857 -252063726 + AluSq SINE Alu 1 298 -15 207 0 0 0 chr2 1193706 1193729 -252062854 + (A)n Simple_repeat Simple_repeat 1 23 0 1119 72 0 0 chr2 1194020 1194172 -252062411 + L1PA8 LINE L1 6017 6168 -4 21 0 0 0 chr2 1194233 1194254 -252062329 + AT_rich Low_complexity Low_complexity 1 21 0 364 177 0 0 chr2 1197217 1197279 -252059304 + MLT1A2 LTR MaLR 4 65 -402 619 239 95 23 chr2 1199085 1199348 -252057235 + MER33 DNA MER1_type 43 324 0 527 233 47 31 chr2 1199484 1199677 -252056906 + L1ME LINE L1 815 1010 -5060 700 224 33 0 chr2 1200093 1200245 -252056338 + MER5A DNA MER1_type 33 189 0 234 307 24 87 chr2 1201580 1201707 -252054876 - MIR SINE MIR -57 151 33 240 271 0 57 chr2 1202169 1202239 -252054344 - MIR3 SINE MIR 0 208 143 2290 84 3 3 chr2 1202483 1202767 -252053816 + AluSq SINE Alu 1 284 -29 207 0 0 0 chr2 1202770 1202793 -252053790 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2334 111 0 0 chr2 1203110 1203417 -252053166 - AluSx SINE Alu -5 307 1 2006 106 0 4 chr2 1203680 1203945 -252052638 + AluSx SINE Alu 34 297 -15 1112 234 42 28 chr2 1204751 1205110 -252051473 + MLT1A1 LTR MaLR 2 365 0 1280 171 33 4 chr2 1205535 1205665 -252050918 - MER4A LTR ERV1 0 664 549 1949 91 12 4 chr2 1205665 1205956 -252050627 - AluSx SINE Alu 0 319 27 1280 171 33 4 chr2 1205956 1206073 -252050510 - MER4A LTR ERV1 -115 549 437 431 145 28 45 chr2 1207174 1207319 -252049264 - MER4A LTR ERV1 -203 461 261 601 141 0 10 chr2 1207319 1207418 -252049165 - MER4A LTR ERV1 -566 98 1 953 242 28 32 chr2 1212198 1212483 -252044100 + MLT1A2 LTR MaLR 62 345 -29 365 319 30 15 chr2 1212583 1212718 -252043865 - L1MC/D LINE L1 -2060 5748 5612 222 237 0 54 chr2 1213010 1213196 -252043387 + (CCA)n Simple_repeat Simple_repeat 2 177 0 410 214 0 33 chr2 1213232 1213414 -252043169 + (CCA)n Simple_repeat Simple_repeat 2 177 0 308 102 25 146 chr2 1213457 1213817 -252042766 + (CCCA)n Simple_repeat Simple_repeat 1 316 0 * 351 211 0 49 chr2 1213497 1213873 -252042710 + (CCA)n Simple_repeat Simple_repeat 1 357 0 345 194 0 54 chr2 1213988 1214174 -252042409 + (CCA)n Simple_repeat Simple_repeat 2 177 0 2347 88 3 3 chr2 1215241 1215538 -252041045 - AluSq SINE Alu -16 297 1 696 263 59 4 chr2 1217111 1217347 -252039236 - MER58 DNA MER1_type -2153 267 19 308 299 13 44 chr2 1218542 1218669 -252037914 + MIR SINE MIR 27 138 -124 2421 112 0 0 chr2 1218669 1218981 -252037602 + AluSx SINE Alu 1 312 0 308 299 13 44 chr2 1218981 1219051 -252037532 + MIR SINE MIR 138 209 -53 205 292 56 22 chr2 1219355 1219444 -252037139 - MIR3 SINE MIR -50 158 67 371 263 5 58 chr2 1220267 1220652 -252035931 + (CCAA)n Simple_repeat Simple_repeat 1 364 0 212 223 27 47 chr2 1220674 1220822 -252035761 + (CTACT)n Simple_repeat Simple_repeat 1 145 0 219 217 108 36 chr2 1220924 1221090 -252035493 + (CCCTA)n Simple_repeat Simple_repeat 1 178 0 365 102 17 0 chr2 1222330 1222389 -252034194 + (TG)n Simple_repeat Simple_repeat 1 60 0 715 201 5 9 chr2 1222391 1222947 -252033636 + GA-rich Low_complexity Low_complexity 1 554 0 255 169 46 15 chr2 1222976 1223041 -252033542 - MLT2D LTR ERVL -50 364 298 351 202 0 0 chr2 1223127 1223226 -252033357 + CT-rich Low_complexity Low_complexity 1 99 0 227 208 0 0 chr2 1223226 1223239 -252033344 + MLT2C2 LTR ERVL 408 420 -44 282 56 0 0 chr2 1223239 1223275 -252033308 + (CA)n Simple_repeat Simple_repeat 1 36 0 227 208 0 0 chr2 1223275 1223314 -252033269 + MLT2C2 LTR ERVL 419 460 -4 1216 220 11 11 chr2 1223426 1223712 -252032871 - MLT2D LTR ERVL -128 286 1 2121 46 85 0 chr2 1224069 1224352 -252032231 + AluY SINE Alu 1 305 0 297 295 101 22 chr2 1224925 1225064 -252031519 + MER105 DNA DNA 55 204 0 643 225 6 17 chr2 1225427 1225792 -252030791 + (TGGA)n Simple_repeat Simple_repeat 1 360 0 806 209 3 15 chr2 1225815 1226229 -252030354 + (TGGA)n Simple_repeat Simple_repeat 1 408 0 3041 198 16 7 chr2 1227122 1227798 -252028785 - L1 LINE L1 -1242 4904 4223 7424 23 0 1 chr2 1227823 1229107 -252027476 + L1PA3 LINE L1 4873 6155 0 997 160 21 46 chr2 1229111 1229349 -252027234 - L1 LINE L1 -795 5351 5120 2029 148 3 10 chr2 1230447 1230752 -252025831 - AluJb SINE Alu -9 303 1 1402 275 100 29 chr2 1230935 1231484 -252025099 - MER82 DNA MER2_type -60 593 6 543 304 61 101 chr2 1232045 1232074 -252024509 + L1ME4a LINE L1 5589 5618 -503 1105 72 0 13 chr2 1232074 1232226 -252024357 + L1PB1 LINE L1 5995 6144 -7 543 304 61 101 chr2 1232226 1232739 -252023844 + L1ME4a LINE L1 5618 6109 -12 21 0 0 0 chr2 1232735 1232756 -252023827 + AT_rich Low_complexity Low_complexity 1 21 0 * 252 0 0 0 chr2 1233667 1233695 -252022888 + (CA)n Simple_repeat Simple_repeat 1 28 0 2710 261 124 55 chr2 1234530 1235972 -252020611 + L1MEc LINE L1 35 1628 -4768 2382 97 0 7 chr2 1235972 1236282 -252020301 + AluSx SINE Alu 1 308 -4 2710 261 124 55 chr2 1236282 1236641 -252019942 + L1MEc LINE L1 1628 1961 -4435 12052 136 60 17 chr2 1236641 1237101 -252019482 - Tigger1 DNA MER2_type -5 2413 1974 2283 121 0 0 chr2 1237101 1237406 -252019177 + AluSc SINE Alu 1 305 -4 12052 136 60 17 chr2 1237406 1239058 -252017525 - Tigger1 DNA MER2_type -444 1974 210 898 154 4 150 chr2 1239064 1239298 -252017285 + AluJo SINE Alu 13 212 -100 2335 98 3 0 chr2 1240053 1240349 -252016234 - AluSx SINE Alu -11 301 5 1933 143 10 3 chr2 1241067 1241361 -252015222 - AluSx SINE Alu -16 296 1 229 318 36 55 chr2 1243225 1243335 -252013248 + L2 LINE L2 3145 3252 -20 654 142 0 28 chr2 1246119 1246260 -252010323 + (GGA)n Simple_repeat Simple_repeat 1 137 0 218 382 0 0 chr2 1246281 1246446 -252010137 + G-rich Low_complexity Low_complexity 1 165 0 21 57 0 0 chr2 1246724 1246759 -252009824 + GC_rich Low_complexity Low_complexity 1 35 0 21 0 0 0 chr2 1247023 1247044 -252009539 + GC_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 1247057 1247078 -252009505 + GC_rich Low_complexity Low_complexity 1 21 0 180 261 0 0 chr2 1247369 1247415 -252009168 - MIR SINE MIR -10 252 207 308 267 125 17 chr2 1248188 1248308 -252008275 - MLT1F1 LTR MaLR -264 303 171 607 299 95 79 chr2 1250516 1251201 -252005382 - MER21B LTR ERV1 -147 716 21 225 287 23 11 chr2 1251397 1251484 -252005099 + L2 LINE L2 2271 2358 -956 1005 207 50 1 chr2 1252674 1252916 -252003667 + MLT2C1 LTR ERVL 61 343 -54 195 250 0 0 chr2 1252916 1253000 -252003583 + (TCCA)n Simple_repeat Simple_repeat 2 85 0 226 297 0 0 chr2 1253000 1253064 -252003519 + CT-rich Low_complexity Low_complexity 1 64 0 745 209 0 0 chr2 1254912 1255041 -252001542 + FLAM_C SINE Alu 1 129 -4 1844 179 74 60 chr2 1255288 1255723 -252000860 + MER41B LTR ERV1 105 384 -94 2377 95 3 0 chr2 1255723 1256017 -252000566 - AluSx SINE Alu -17 295 1 1844 179 74 60 chr2 1256017 1256105 -252000478 + MER41B LTR ERV1 384 469 -9 31 0 0 0 chr2 1256198 1256229 -252000354 + AT_rich Low_complexity Low_complexity 1 31 0 219 301 42 49 chr2 1256236 1256379 -252000204 - MIR SINE MIR -75 187 46 252 277 145 0 chr2 1257085 1257168 -251999415 + MIR SINE MIR 52 146 -62 198 282 214 8 chr2 1258809 1258926 -251997657 - MER5A DNA MER1_type -23 166 26 252 205 0 108 chr2 1258933 1259016 -251997567 - MER66A LTR ERV1 -13 465 392 2418 96 0 0 chr2 1259051 1259363 -251997220 + AluSx SINE Alu 1 312 0 21 0 0 0 chr2 1259407 1259428 -251997155 + AT_rich Low_complexity Low_complexity 1 21 0 2186 109 7 3 chr2 1259437 1259759 -251996824 + AluSq SINE Alu 1 313 0 322 262 91 9 chr2 1260604 1260718 -251995865 + MIR SINE MIR 30 151 -63 3338 170 25 47 chr2 1261379 1262164 -251994419 - pTR5 LTR ERV1 -730 1708 743 726 82 0 0 chr2 1262164 1262261 -251994322 - MER4B LTR ERV1 -96 514 418 39671 64 9 3 chr2 1262264 1268339 -251988244 + L1PA5 LINE L1 11 6124 -30 653 144 8 44 chr2 1268339 1268540 -251988043 - MER4A LTR ERV1 -173 593 264 521 146 31 10 chr2 1268543 1268639 -251987944 - MER4A LTR ERV1 -566 98 1 337 313 45 8 chr2 1268640 1268774 -251987809 + MLT1C LTR MaLR 43 181 -286 573 211 0 64 chr2 1269752 1269908 -251986675 + MER77 LTR ERV1 62 207 -398 228 261 35 78 chr2 1270128 1270243 -251986340 - MER5A DNA MER1_type 0 189 80 272 303 18 37 chr2 1270615 1270749 -251985834 - MIR SINE MIR -53 155 24 1750 176 0 29 chr2 1270865 1271171 -251985412 + AluJo SINE Alu 1 297 -15 2413 53 3 3 chr2 1271183 1271494 -251985089 + AluY SINE Alu 1 311 0 968 189 6 0 chr2 1271494 1271653 -251984930 + AluJo/FRAM SINE Alu 135 294 -18 721 247 52 51 chr2 1273603 1274005 -251982578 - MER67C LTR ERV1 -1 709 119 1037 134 21 5 chr2 1276175 1276361 -251980222 - MER65A LTR ERV1 -4 441 253 1584 216 71 0 chr2 1276363 1276728 -251979855 + MER57A LTR ERV1 3 393 -10 1254 188 4 16 chr2 1276745 1277001 -251979582 - MER65A LTR ERV1 -189 256 4 3435 131 15 71 chr2 1277280 1277630 -251978953 - MER41B LTR ERV1 0 635 340 756 188 0 0 chr2 1277630 1277763 -251978820 + FLAM_C SINE Alu 1 133 0 3435 131 15 71 chr2 1277763 1278085 -251978498 - MER41B LTR ERV1 -295 340 1 2368 110 0 0 chr2 1278389 1278689 -251977894 - AluSx SINE Alu -12 300 1 2146 117 3 0 chr2 1278913 1279203 -251977380 - AluSg SINE Alu -19 291 1 366 247 99 99 chr2 1279454 1279778 -251976805 - MER34C LTR ERV1 -3 582 259 639 261 0 6 chr2 1279866 1280023 -251976560 - MER34C LTR ERV1 -385 200 45 1480 176 53 7 chr2 1280192 1280476 -251976107 + MER57A LTR ERV1 107 403 0 242 250 33 58 chr2 1280930 1281050 -251975533 - LTR23 LTR ERV1 0 437 321 31 0 0 0 chr2 1281153 1281184 -251975399 + AT_rich Low_complexity Low_complexity 1 31 0 454 33 0 0 chr2 1281184 1281245 -251975338 - L1PA4 LINE L1 -3 6152 6092 403 52 0 0 chr2 1281251 1281309 -251975274 + L1PA2 LINE L1 5989 6046 -109 1204 199 77 3 chr2 1281310 1281622 -251974961 - LTR56 LTR ERV1 -110 335 1 383 206 178 9 chr2 1281622 1281728 -251974855 + MER34C LTR ERV1 115 238 -347 361 183 65 0 chr2 1281818 1281987 -251974596 + (CAG)n Simple_repeat Simple_repeat 1 180 0 311 172 63 29 chr2 1282121 1282295 -251974288 + (CAG)n Simple_repeat Simple_repeat 1 180 0 316 190 58 23 chr2 1282499 1282673 -251973910 + (CAG)n Simple_repeat Simple_repeat 1 180 0 383 254 66 104 chr2 1283180 1283467 -251973116 + MER34C LTR ERV1 310 585 0 186 350 60 0 chr2 1284041 1284141 -251972442 + MIR SINE MIR 59 164 -98 1318 240 122 22 chr2 1284148 1284446 -251972137 + MER39 LTR ERV1 1 268 -439 1565 263 142 12 chr2 1284446 1285016 -251971567 - LTR48B LTR ERV1 0 644 1 1318 240 122 22 chr2 1285016 1285308 -251971275 + MER39 LTR ERV1 268 691 -16 557 254 117 0 chr2 1285312 1285509 -251971074 - MER31A LTR ERV1 -249 236 17 2098 115 3 0 chr2 1285588 1285884 -251970699 - AluSx SINE Alu -13 299 3 1549 266 72 13 chr2 1286360 1286887 -251969696 + MER89 LTR ERV1 1 558 -1 439 83 0 0 chr2 1288611 1288671 -251967912 - MER4C LTR ERV1 0 465 406 5183 114 31 9 chr2 1288672 1289018 -251967565 + MER4E LTR ERV1 1 338 -441 1988 123 10 7 chr2 1289018 1289326 -251967257 + AluSg SINE Alu 1 309 -1 5183 114 31 9 chr2 1289326 1289741 -251966842 + MER4E LTR ERV1 338 779 0 368 306 78 29 chr2 1289760 1290045 -251966538 - L1ME4a LINE L1 -225 5896 5549 183 129 0 0 chr2 1292246 1292277 -251964306 + (TA)n Simple_repeat Simple_repeat 2 32 0 25 0 0 0 chr2 1292504 1292529 -251964054 + AT_rich Low_complexity Low_complexity 1 25 0 195 114 0 0 chr2 1293754 1293789 -251962794 + (TG)n Simple_repeat Simple_repeat 2 36 0 2316 103 0 0 chr2 1294883 1295195 -251961388 + AluSx SINE Alu 1 312 0 681 266 153 35 chr2 1298254 1298536 -251958047 + MER58B DNA MER1_type 27 341 0 1928 46 13 0 chr2 1299576 1299815 -251956768 - AluY SINE Alu -69 242 1 180 356 82 7 chr2 1301761 1301896 -251954687 + L3b LINE CR1 1291 1435 -148 2221 110 40 35 chr2 1302018 1302390 -251954193 + THE1C LTR MaLR 1 374 -1 242 340 43 0 chr2 1302943 1303037 -251953546 + MIR SINE MIR 86 183 -79 1024 113 69 13 chr2 1355009 1355168 -251901415 - AluSx SINE Alu -16 296 129 421 121 24 12 chr2 1355168 1355251 -251901332 + CT-rich Low_complexity Low_complexity 1 84 0 925 114 15 8 chr2 1355251 1355383 -251901200 - AluSx SINE Alu -180 133 1 1426 164 0 5 chr2 1356904 1357118 -251899465 + AluJb SINE Alu 2 214 -98 234 150 0 0 chr2 1357150 1357190 -251899393 + (GAAAA)n Simple_repeat Simple_repeat 4 43 0 725 145 5 43 chr2 1357190 1357376 -251899207 + GA-rich Low_complexity Low_complexity 2 180 0 641 130 0 68 chr2 1357348 1357540 -251899043 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 * 619 175 9 38 chr2 1357502 1357742 -251898841 + GA-rich Low_complexity Low_complexity 1 232 0 * 735 159 6 28 chr2 1358671 1358853 -251897730 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 341 308 67 51 chr2 1358853 1359106 -251897477 - L1MEd LINE L1 -4903 1216 960 1017 43 12 24 chr2 1359129 1359293 -251897290 + (TCTA)n Simple_repeat Simple_repeat 3 164 0 1173 154 13 44 chr2 1359901 1360128 -251896455 - L1PB2 LINE L1 -8 6143 5924 396 92 67 17 chr2 1360185 1360305 -251896278 + (TCTA)n Simple_repeat Simple_repeat 4 129 0 227 342 70 27 chr2 1362121 1362308 -251894275 + L2 LINE L2 2905 3099 -173 323 305 24 54 chr2 1362891 1363058 -251893525 - MIR3 SINE MIR -15 193 32 735 158 38 0 chr2 1363808 1363941 -251892642 + L1PB4 LINE L1 6019 6156 0 405 206 109 0 chr2 1364350 1364442 -251892141 - Tigger1 DNA MER2_type 0 2418 2317 1159 206 25 4 chr2 1364444 1364720 -251891863 + L1MA4 LINE L1 6012 6293 -7 13293 138 42 4 chr2 1364939 1367140 -251889443 - Tigger1 DNA MER2_type -134 2284 1 278 297 71 34 chr2 1369148 1369414 -251887169 + L1ME4a LINE L1 5622 5897 -224 367 73 18 0 chr2 1369637 1369692 -251886891 - L1PB3 LINE L1 -3 6151 6096 361 189 301 35 chr2 1372045 1372188 -251884395 - MER5A DNA MER1_type -4 185 5 234 234 16 0 chr2 1372524 1372588 -251883995 + MLT1L LTR MaLR 550 614 -1 185 259 93 0 chr2 1375446 1375500 -251881083 - MIR SINE MIR -87 175 117 4532 176 26 6 chr2 1375590 1377361 -251879222 + L1PA16 LINE L1 4326 6166 0 22 56 0 0 chr2 1377685 1377721 -251878862 + AT_rich Low_complexity Low_complexity 1 36 0 2333 119 3 0 chr2 1377998 1378309 -251878274 - AluSx SINE Alu 0 312 1 595 351 39 0 chr2 1379694 1379999 -251876584 - MER58B DNA MER1_type 0 341 25 263 183 28 0 chr2 1380365 1380436 -251876147 + (CAGA)n Simple_repeat Simple_repeat 3 75 0 2504 64 0 0 chr2 1380849 1381145 -251875438 - AluY SINE Alu -15 296 1 294 184 105 26 chr2 1381197 1381273 -251875310 + L1PB4 LINE L1 6070 6151 -5 362 191 0 0 chr2 1382266 1382329 -251874254 - AluSx SINE Alu -5 295 233 1239 131 0 0 chr2 1382331 1382506 -251874077 - AluSx SINE Alu -137 175 1 25 0 0 0 chr2 1382689 1382714 -251873869 + AT_rich Low_complexity Low_complexity 1 25 0 419 243 30 65 chr2 1383024 1383193 -251873390 - MER5B DNA MER1_type -10 168 6 291 114 0 0 chr2 1384473 1384517 -251872066 + (TG)n Simple_repeat Simple_repeat 2 45 0 910 238 94 20 chr2 1384554 1384895 -251871688 - L1MD3 LINE L1 -8 7987 7622 1973 127 0 10 chr2 1384909 1385217 -251871366 - AluSx SINE Alu -7 305 1 839 128 6 70 chr2 1385275 1385344 -251871239 - AluSx SINE Alu -109 203 131 1915 68 0 12 chr2 1385344 1385592 -251870991 - AluY SINE Alu -16 295 51 839 128 6 70 chr2 1385592 1385678 -251870905 - AluSx SINE Alu -181 131 58 2098 99 7 0 chr2 1385905 1386198 -251870385 - AluSq SINE Alu -16 297 3 1705 144 0 75 chr2 1387342 1387463 -251869120 + AluJo SINE Alu 1 129 -183 180 0 0 0 chr2 1387463 1387483 -251869100 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1705 144 0 75 chr2 1387483 1387695 -251868888 + AluJo SINE Alu 129 309 -3 22 0 0 0 chr2 1389486 1389508 -251867075 + AT_rich Low_complexity Low_complexity 1 22 0 772 176 0 22 chr2 1389665 1389801 -251866782 - AluJb SINE Alu -11 301 169 329 379 38 17 chr2 1389802 1390037 -251866546 + L1ME4a LINE L1 5653 5892 -229 195 316 63 25 chr2 1390203 1390282 -251866301 + MIR SINE MIR 84 165 -97 22 35 0 0 chr2 1393175 1393204 -251863379 + AT_rich Low_complexity Low_complexity 1 29 0 2246 93 0 7 chr2 1394522 1394832 -251861751 + AluSg SINE Alu 3 310 0 182 333 76 31 chr2 1395082 1395436 -251861147 + L2 LINE L2 2257 2626 -688 297 284 115 34 chr2 1396097 1396246 -251860337 - MIR3 SINE MIR -51 157 44 434 216 128 24 chr2 1397395 1397520 -251859063 - MIR3 SINE MIR -26 182 45 207 226 19 0 chr2 1399880 1399933 -251856650 + (CAAA)n Simple_repeat Simple_repeat 2 55 0 198 91 0 0 chr2 1400257 1400290 -251856293 + (TTTAA)n Simple_repeat Simple_repeat 3 35 0 1777 45 45 0 chr2 1400290 1400513 -251856070 - AluY SINE Alu -27 284 52 187 70 116 0 chr2 1400841 1400884 -251855699 + A-rich Low_complexity Low_complexity 3 50 0 242 215 13 38 chr2 1401957 1402036 -251854547 + (CATATA)n Simple_repeat Simple_repeat 4 80 0 21 0 0 0 chr2 1402104 1402125 -251854458 + AT_rich Low_complexity Low_complexity 1 21 0 185 128 0 26 chr2 1403814 1403853 -251852730 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 1738 139 85 0 chr2 1407104 1407385 -251849198 - AluSx SINE Alu -7 305 1 1670 154 49 0 chr2 1408501 1408786 -251847797 - AluJb SINE Alu -13 299 1 231 311 78 0 chr2 1410280 1410370 -251846213 - MIR3 SINE MIR -16 192 96 643 123 61 0 chr2 1411321 1411435 -251845148 - L1PA15 LINE L1 -7 6158 6038 625 281 144 22 chr2 1413033 1413393 -251843190 - L2 LINE L2 -62 3251 2848 398 249 67 61 chr2 1414303 1414468 -251842115 + MER3 DNA MER1_type 40 205 -4 2414 53 3 0 chr2 1414515 1414818 -251841765 - AluY SINE Alu -7 304 1 222 214 29 14 chr2 1414831 1414901 -251841682 + (TA)n Simple_repeat Simple_repeat 1 71 0 213 139 0 0 chr2 1415203 1415246 -251841337 + (TC)n Simple_repeat Simple_repeat 2 44 0 387 0 0 0 chr2 1415273 1415316 -251841267 + (CA)n Simple_repeat Simple_repeat 2 44 0 297 230 107 89 chr2 1416097 1416271 -251840312 - MIR SINE MIR -50 212 36 1996 126 0 13 chr2 1416466 1416768 -251839815 - AluSp SINE Alu -15 298 1 197 239 65 98 chr2 1419228 1419320 -251837263 + MIR SINE MIR 117 205 -57 311 326 61 15 chr2 1422181 1422313 -251834270 + L1MC4 LINE L1 6582 6719 -1323 * 326 300 0 55 chr2 1422250 1422360 -251834223 - L1MC4 LINE L1 -1340 6702 6599 234 62 0 0 chr2 1422705 1422737 -251833846 + (CAAA)n Simple_repeat Simple_repeat 1 32 0 576 184 0 0 chr2 1423531 1423678 -251832905 + CT-rich Low_complexity Low_complexity 1 147 0 207 179 0 0 chr2 1423704 1423743 -251832840 + CT-rich Low_complexity Low_complexity 2 40 0 25 75 0 0 chr2 1424275 1424328 -251832255 + AT_rich Low_complexity Low_complexity 1 53 0 1333 87 108 0 chr2 1424647 1424842 -251831741 - L1PA5 LINE L1 0 6154 5939 243 250 66 26 chr2 1425319 1425395 -251831188 + L2 LINE L2 3235 3313 0 352 303 61 36 chr2 1426110 1426275 -251830308 + MIR SINE MIR 86 254 -8 3334 106 42 15 chr2 1426506 1426986 -251829597 + MER1A DNA MER1_type 37 529 0 353 267 95 9 chr2 1427035 1427151 -251829432 + MIR3 SINE MIR 69 194 -14 464 277 85 43 chr2 1430545 1430733 -251825850 - MIR SINE MIR -2 260 65 254 294 50 89 chr2 1430712 1430892 -251825691 + MIR SINE MIR 79 251 -11 * 182 122 0 41 chr2 1431050 1431099 -251825484 + (CAGAGA)n Simple_repeat Simple_repeat 5 51 0 218 226 16 0 chr2 1431151 1431213 -251825370 + (CAGAGA)n Simple_repeat Simple_repeat 3 65 0 191 360 10 10 chr2 1431360 1431460 -251825123 - L2 LINE L2 -600 2714 2615 200 290 81 0 chr2 1432172 1432234 -251824349 + MIR SINE MIR 82 148 -60 30 59 0 0 chr2 1432555 1432606 -251823977 + AT_rich Low_complexity Low_complexity 1 51 0 186 43 0 0 chr2 1433232 1433255 -251823328 + (TTCC)n Simple_repeat Simple_repeat 1 23 0 813 133 7 46 chr2 1434526 1434677 -251821906 + FRAM SINE Alu 22 166 -10 2394 83 0 6 chr2 1434920 1435234 -251821349 + AluSx SINE Alu 1 312 0 1004 112 0 0 chr2 1438918 1439052 -251817531 + AluSq/x SINE Alu 1 134 -178 2014 128 0 0 chr2 1439055 1439344 -251817239 + AluSx SINE Alu 3 291 -21 2186 98 0 0 chr2 1439831 1440127 -251816456 + AluSx SINE Alu 1 296 -16 295 366 9 18 chr2 1440357 1440469 -251816114 - MIR3 SINE MIR -52 156 46 1203 124 0 0 chr2 1440971 1441156 -251815427 + L1MA2 LINE L1 6120 6304 0 290 143 44 0 chr2 1443627 1443718 -251812865 + (TA)n Simple_repeat Simple_repeat 2 96 0 267 130 29 14 chr2 1443747 1443816 -251812767 + (TA)n Simple_repeat Simple_repeat 1 70 0 349 333 42 0 chr2 1444045 1444165 -251812418 - MIR SINE MIR -50 212 88 186 43 0 0 chr2 1444960 1444983 -251811600 + (TGAA)n Simple_repeat Simple_repeat 1 23 0 358 306 20 61 chr2 1445967 1446163 -251810420 - L2 LINE L2 -208 3064 2877 195 380 0 0 chr2 1446726 1446805 -251809778 + MIR SINE MIR 172 250 -12 21 0 0 0 chr2 1447420 1447441 -251809142 + AT_rich Low_complexity Low_complexity 1 21 0 1252 181 104 4 chr2 1447708 1447968 -251808615 - AluJo SINE Alu -26 286 1 2397 73 0 0 chr2 1447977 1448280 -251808303 - AluY SINE Alu -8 303 1 221 240 20 0 chr2 1449554 1449604 -251806979 + L2 LINE L2 3222 3272 0 228 122 0 0 chr2 1450782 1450823 -251805760 + (T)n Simple_repeat Simple_repeat 1 41 0 232 316 124 28 chr2 1452034 1452211 -251804372 + MIR SINE MIR 42 235 -27 581 126 0 0 chr2 1452213 1452300 -251804283 - AluJ/FLAM SINE Alu -225 87 1 218 333 0 0 chr2 1452917 1452977 -251803606 + L2 LINE L2 3205 3264 -8 2219 101 3 3 chr2 1453186 1453494 -251803089 + AluSq SINE Alu 1 308 -5 183 375 0 39 chr2 1453789 1453893 -251802690 + L2 LINE L2 3195 3294 -19 276 350 21 0 chr2 1453989 1454086 -251802497 + MIR SINE MIR 13 111 -151 1080 195 107 7 chr2 1454778 1455050 -251801533 - AluJb SINE Alu -13 299 1 5128 87 13 1 chr2 1456052 1456728 -251799855 + LTR8 LTR ERV1 8 691 0 310 317 7 7 chr2 1456925 1457067 -251799516 - L1ME4a LINE L1 -224 5897 5756 25 0 0 0 chr2 1458225 1458250 -251798333 + AT_rich Low_complexity Low_complexity 1 25 0 22 0 0 0 chr2 1458343 1458365 -251798218 + AT_rich Low_complexity Low_complexity 1 22 0 385 283 76 7 chr2 1460693 1460854 -251795729 + MIR SINE MIR 3 167 -66 212 83 0 28 chr2 1462359 1462395 -251794188 + (GAAAA)n Simple_repeat Simple_repeat 1 35 0 180 307 120 0 chr2 1462787 1462862 -251793721 - L2 LINE L2 -5 3267 3184 22 35 0 0 chr2 1463006 1463035 -251793548 + AT_rich Low_complexity Low_complexity 1 29 0 354 305 48 45 chr2 1464440 1464837 -251791746 - HAL1 LINE L1 -1047 1460 1063 261 327 106 0 chr2 1465049 1465162 -251791421 - MIR SINE MIR -79 183 59 273 323 62 73 chr2 1465415 1465675 -251790908 + MER112 DNA MER1_type 3 259 -1 1874 130 29 69 chr2 1466148 1466524 -251790059 + THE1C LTR MaLR 15 375 0 474 294 0 0 chr2 1467397 1467643 -251788940 + CT-rich Low_complexity Low_complexity 1 246 0 269 331 0 0 chr2 1467794 1467963 -251788620 + CT-rich Low_complexity Low_complexity 3 171 0 290 322 0 6 chr2 1468050 1468230 -251788353 + CT-rich Low_complexity Low_complexity 1 179 0 283 325 0 0 chr2 1468351 1468520 -251788063 + CT-rich Low_complexity Low_complexity 3 171 0 229 346 0 0 chr2 1468433 1468612 -251787971 + (CTTG)n Simple_repeat Simple_repeat 2 180 0 * 445 278 6 6 chr2 1468901 1469081 -251787502 + (CCTG)n Simple_repeat Simple_repeat 1 180 0 244 329 0 0 chr2 1469059 1469301 -251787282 + (CATG)n Simple_repeat Simple_repeat 1 242 0 * 2794 209 86 38 chr2 1469397 1469707 -251786876 - L1MA9 LINE L1 -38 6274 5980 2032 138 0 0 chr2 1469707 1470012 -251786571 - AluSx SINE Alu -5 307 3 2794 209 86 38 chr2 1470012 1470183 -251786400 - L1MA9 LINE L1 -332 5980 5819 180 0 0 0 chr2 1470183 1470203 -251786380 + (TA)n Simple_repeat Simple_repeat 2 21 0 2794 209 86 38 chr2 1470203 1470491 -251786092 - L1MA9 LINE L1 -493 5819 5467 906 118 105 0 chr2 1470491 1470644 -251785939 - MER4C LTR ERV1 0 465 297 * 1246 116 0 5 chr2 1470637 1470826 -251785757 - MER4C LTR ERV1 -277 188 1 6334 201 19 39 chr2 1470827 1470862 -251785721 - L1MA9 LINE L1 -714 5469 5435 3109 165 100 27 chr2 1470862 1471539 -251785044 + LTR8A LTR ERV1 1 727 0 6334 201 19 39 chr2 1471539 1473205 -251783378 - L1MA9 LINE L1 -748 5435 3808 2238 207 57 117 chr2 1473865 1474245 -251782338 + L1MB8 LINE L1 4700 5101 -1077 2031 110 0 43 chr2 1474245 1474571 -251782012 + AluSx SINE Alu 1 312 0 2238 207 57 117 chr2 1474571 1475690 -251780893 + L1MB8 LINE L1 5101 6097 -81 2138 232 44 13 chr2 1475696 1476217 -251780366 + MER44D DNA MER2_type 9 600 -5 424 127 42 0 chr2 1476225 1476296 -251780287 + L1MB7 LINE L1 6101 6174 -10 353 329 91 11 chr2 1479175 1479449 -251777134 - L2 LINE L2 -4 3309 3014 381 102 0 0 chr2 1480771 1480830 -251775753 + (TCCA)n Simple_repeat Simple_repeat 3 61 0 2613 105 8 3 chr2 1482176 1482537 -251774046 + THE1B LTR MaLR 2 364 0 1869 154 14 0 chr2 1482925 1483218 -251773365 - AluJb SINE Alu -15 297 1 2415 74 0 0 chr2 1484689 1484987 -251771596 + AluY SINE Alu 1 298 -13 939 158 7 0 chr2 1485628 1485780 -251770803 + MER50 LTR ERV1 452 604 -130 446 213 11 20 chr2 1487253 1487368 -251769215 - L1MA6 LINE L1 -147 6154 6042 235 298 193 9 chr2 1491791 1491905 -251764678 - L2 LINE L2 -1 3271 3137 2440 119 25 0 chr2 1492325 1492679 -251763904 - THE1B LTR MaLR 0 364 2 2109 104 0 0 chr2 1493156 1493453 -251763130 - AluY SINE Alu 0 312 16 246 291 39 39 chr2 1497068 1497171 -251759412 + MIR3 SINE MIR 13 115 -93 538 360 93 15 chr2 1499438 1500298 -251756285 + L2 LINE L2 2345 3272 -41 1979 140 10 0 chr2 1500439 1500739 -251755844 + AluSx SINE Alu 1 303 -9 227 350 26 43 chr2 1500872 1500989 -251755594 + L2 LINE L2 3072 3186 -86 960 174 0 0 chr2 1502212 1502367 -251754216 + FRAM SINE Alu 5 159 -7 23 33 0 0 chr2 1503751 1503781 -251752802 + AT_rich Low_complexity Low_complexity 1 30 0 1060 259 4 0 chr2 1505064 1505307 -251751276 + MER47B DNA MER2_type 175 418 0 389 335 71 8 chr2 1505944 1506183 -251750400 + L2 LINE L2 490 743 -2571 352 235 147 59 chr2 1509182 1509421 -251747162 - L1MC4a LINE L1 -165 5956 5695 249 316 89 48 chr2 1509426 1509594 -251746989 - MIR SINE MIR 0 262 88 229 217 142 9 chr2 1509889 1509995 -251746588 - L1MC4a LINE L1 -2408 5400 5281 422 312 0 32 chr2 1512364 1512489 -251744094 + MIR SINE MIR 10 130 -132 219 69 0 0 chr2 1512507 1512536 -251744047 + (TAGA)n Simple_repeat Simple_repeat 4 32 0 2126 134 36 36 chr2 1512539 1512897 -251743686 + THE1B LTR MaLR 7 364 0 202 216 0 0 chr2 1512899 1512936 -251743647 + (TATATG)n Simple_repeat Simple_repeat 4 40 0 247 220 60 70 chr2 1512936 1513036 -251743547 + MIR SINE MIR 152 250 -12 4028 195 69 24 chr2 1514834 1516385 -251740198 + L1MB3 LINE L1 4571 6177 -6 249 291 34 11 chr2 1517784 1517959 -251738624 + (AGATG)n Simple_repeat Simple_repeat 1 179 0 23 0 0 0 chr2 1518348 1518371 -251738212 + AT_rich Low_complexity Low_complexity 1 23 0 249 33 0 0 chr2 1519442 1519472 -251737111 + (TCCA)n Simple_repeat Simple_repeat 1 30 0 1037 205 122 42 chr2 1519893 1520229 -251736354 - L1MD2 LINE L1 -10 6349 5987 3183 226 51 10 chr2 1520521 1521405 -251735178 - L1MD2 LINE L1 -324 6035 5120 311 313 12 38 chr2 1521419 1521579 -251735004 + L2 LINE L2 3158 3313 0 352 118 40 26 chr2 1523615 1523691 -251732892 + C-rich Low_complexity Low_complexity 2 78 0 403 192 10 10 chr2 1523710 1523809 -251732774 + CT-rich Low_complexity Low_complexity 1 99 0 24 67 0 0 chr2 1523898 1523943 -251732640 + AT_rich Low_complexity Low_complexity 1 45 0 879 292 134 60 chr2 1524771 1526421 -251730162 - HAL1 LINE L1 -3 2504 732 2230 132 0 0 chr2 1526512 1526823 -251729760 + AluSq SINE Alu 1 311 -2 1592 179 11 7 chr2 1527887 1528172 -251728411 + AluJb SINE Alu 21 306 -6 29 0 0 0 chr2 1528240 1528269 -251728314 + AT_rich Low_complexity Low_complexity 1 29 0 420 20 0 0 chr2 1528774 1528823 -251727760 + (CA)n Simple_repeat Simple_repeat 2 50 0 238 274 12 24 chr2 1529218 1529302 -251727281 - MIR SINE MIR -25 237 155 233 315 47 24 chr2 1529342 1529469 -251727114 + MIR SINE MIR 62 191 -71 437 303 106 31 chr2 1529792 1530405 -251726178 + L1ME LINE L1 4366 5024 -1122 562 205 131 0 chr2 1530417 1530539 -251726044 + FLAM_C SINE Alu 6 143 0 343 275 118 26 chr2 1530545 1530981 -251725602 + L1ME LINE L1 5030 5506 -656 2583 191 19 56 chr2 1532434 1532636 -251723947 - MER44D DNA MER2_type -1882 605 397 2187 102 3 3 chr2 1532636 1532916 -251723667 + AluSx SINE Alu 1 283 -29 189 0 0 0 chr2 1532916 1532937 -251723646 + (CAAT)n Simple_repeat Simple_repeat 4 24 0 2187 102 3 3 chr2 1532937 1532951 -251723632 + AluSx SINE Alu 282 295 -17 2583 191 19 56 chr2 1532951 1533319 -251723264 - MER44D DNA MER2_type -2090 397 1 1201 200 136 4 chr2 1533880 1534145 -251722438 + AluJo SINE Alu 3 302 0 3319 87 20 0 chr2 1535245 1535704 -251720879 + L1PA13 LINE L1 5696 6163 0 2269 103 0 0 chr2 1535707 1535988 -251720595 + AluSp SINE Alu 1 281 -32 261 0 0 0 chr2 1535988 1536017 -251720566 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 362 216 0 9 chr2 1539481 1539592 -251716991 + (CA)n Simple_repeat Simple_repeat 2 111 0 508 238 39 33 chr2 1540797 1540978 -251715605 + MIR SINE MIR 22 203 -59 514 219 182 0 chr2 1541182 1541369 -251715214 + L1MC5 LINE L1 7008 7228 -733 938 246 56 58 chr2 1541519 1541797 -251714786 + L1MC5 LINE L1 7304 7583 -378 2046 97 29 14 chr2 1541797 1542098 -251714485 + AluSx SINE Alu 1 305 0 938 246 56 58 chr2 1542098 1542334 -251714249 + L1MC5 LINE L1 7583 7818 -143 2400 65 0 40 chr2 1544306 1544629 -251711954 + AluY SINE Alu 1 310 -1 30 45 0 0 chr2 1544884 1544928 -251711655 + AT_rich Low_complexity Low_complexity 1 44 0 435 149 0 0 chr2 1546151 1546225 -251710358 + (CA)n Simple_repeat Simple_repeat 1 74 0 311 204 66 72 chr2 1546288 1546455 -251710128 - L1MC4 LINE L1 -188 7854 7689 27 100 0 0 chr2 1546732 1546822 -251709761 + AT_rich Low_complexity Low_complexity 1 90 0 212 297 0 14 chr2 1546990 1547064 -251709519 + CT-rich Low_complexity Low_complexity 4 76 0 280 295 114 0 chr2 1547333 1547438 -251709145 + MIR SINE MIR 24 140 -122 269 266 75 0 chr2 1547745 1547839 -251708744 - L1MC4a LINE L1 -1910 5898 5798 190 328 74 16 chr2 1547960 1548082 -251708501 - MIR SINE MIR -5 257 129 21 0 0 0 chr2 1548853 1548874 -251707709 + AT_rich Low_complexity Low_complexity 1 21 0 307 294 103 38 chr2 1549856 1550040 -251706543 - MIR SINE MIR -29 233 38 555 278 57 10 chr2 1551186 1551395 -251705188 + MER58A DNA MER1_type 2 220 -4 198 103 0 0 chr2 1552478 1552507 -251704076 + (TTG)n Simple_repeat Simple_repeat 2 30 0 2312 109 43 3 chr2 1554079 1554429 -251702154 + L1PA16 LINE L1 5793 6156 -10 368 82 16 0 chr2 1555946 1556007 -251700576 + (CA)n Simple_repeat Simple_repeat 2 63 0 24 103 0 0 chr2 1556047 1556134 -251700449 + AT_rich Low_complexity Low_complexity 1 87 0 22 70 0 0 chr2 1556470 1556513 -251700070 + AT_rich Low_complexity Low_complexity 1 43 0 1848 153 33 24 chr2 1558512 1558846 -251697737 - MER1B DNA MER1_type 0 337 1 340 273 80 33 chr2 1559026 1559176 -251697407 + MER103 DNA DNA 10 166 0 225 178 0 0 chr2 1559406 1559451 -251697132 + CT-rich Low_complexity Low_complexity 3 47 0 297 320 0 0 chr2 1561090 1561165 -251695418 + polypurine Low_complexity Low_complexity 3 77 0 497 99 0 0 chr2 1561265 1561336 -251695247 + L1P3 LINE L1 5384 5454 -700 265 127 0 111 chr2 1561327 1561390 -251695193 + L1MA8 LINE L1 6236 6291 0 * 366 290 55 45 chr2 1562938 1563138 -251693445 - L2 LINE L2 -534 2780 2579 205 316 11 0 chr2 1563193 1563288 -251693295 - L2 LINE L2 -939 2375 2280 223 353 88 0 chr2 1563567 1563703 -251692880 + L2 LINE L2 2211 2358 -956 1777 189 54 23 chr2 1563780 1563877 -251692706 - MLT1A1 LTR MaLR 0 365 272 1675 137 103 37 chr2 1563877 1564227 -251692356 + THE1C LTR MaLR 3 375 0 1777 189 54 23 chr2 1564227 1564483 -251692100 - MLT1A1 LTR MaLR -93 272 1 423 247 147 65 chr2 1566148 1566379 -251690204 - MIR SINE MIR 0 262 13 261 234 68 104 chr2 1567018 1567210 -251689373 + L1MB7 LINE L1 72 256 -6286 778 299 74 11 chr2 1567374 1567738 -251688845 + L1MB7 LINE L1 485 871 -5671 2433 267 49 39 chr2 1567925 1570056 -251686527 + L1MB7 LINE L1 946 3081 -3563 * 3218 219 29 54 chr2 1570044 1570132 -251686451 + L1MB7 LINE L1 4755 4844 -1838 1717 181 79 18 chr2 1570132 1570474 -251686109 + MLT1A1 LTR MaLR 3 365 0 3218 219 29 54 chr2 1570474 1570802 -251685781 + L1MB7 LINE L1 4844 5179 -1503 2421 76 0 22 chr2 1570802 1571119 -251685464 + AluY SINE Alu 1 310 -1 3218 219 29 54 chr2 1571119 1572129 -251684454 + L1MB7 LINE L1 5179 6140 -542 1417 208 7 13 chr2 1572152 1572460 -251684123 + L1MB7 LINE L1 6362 6667 -15 2241 89 0 11 chr2 1572998 1573318 -251683265 - AluSg SINE Alu 0 318 2 234 204 0 20 chr2 1575662 1575711 -251680872 + MLT1E LTR MaLR 113 160 -433 666 287 46 26 chr2 1575781 1576088 -251680495 + MLT1E LTR MaLR 281 593 0 280 281 12 12 chr2 1576908 1576990 -251679593 + L2 LINE L2 3187 3268 -4 240 357 25 25 chr2 1579182 1579378 -251677205 + MIR SINE MIR 44 239 -23 242 261 18 45 chr2 1580847 1580958 -251675625 - MIR3 SINE MIR -4 204 97 303 49 0 0 chr2 1580998 1581039 -251675544 + (TCTCTG)n Simple_repeat Simple_repeat 2 42 0 194 278 0 37 chr2 1581086 1581140 -251675443 + MIR SINE MIR 66 117 -91 2152 252 63 18 chr2 1581339 1581524 -251675059 + MER82 DNA MER2_type 12 187 -466 14525 135 26 18 chr2 1581524 1583917 -251672666 - Tigger1 DNA MER2_type 0 2418 5 2152 252 63 18 chr2 1583917 1584345 -251672238 + MER82 DNA MER2_type 187 653 0 22 0 0 0 chr2 1584359 1584381 -251672202 + AT_rich Low_complexity Low_complexity 1 22 0 6003 42 0 0 chr2 1584708 1585438 -251671145 - L1PA5 LINE L1 -743 5403 4674 6452 41 1 4 chr2 1585438 1586198 -251670385 + L1PA5 LINE L1 5390 6151 -3 21 0 0 0 chr2 1587320 1587341 -251669242 + AT_rich Low_complexity Low_complexity 1 21 0 1825 176 58 6 chr2 1589048 1589395 -251667188 + MSTB LTR MaLR 2 366 -60 716 199 28 33 chr2 1589780 1589961 -251666622 + MER20 DNA MER1_type 7 186 -33 206 245 20 0 chr2 1592728 1592777 -251663806 + (TCCA)n Simple_repeat Simple_repeat 4 53 0 791 183 4 0 chr2 1592798 1593068 -251663515 + (TCCA)n Simple_repeat Simple_repeat 1 271 0 351 0 0 0 chr2 1593897 1593936 -251662647 + (TG)n Simple_repeat Simple_repeat 2 40 0 21 36 0 0 chr2 1594193 1594221 -251662362 + AT_rich Low_complexity Low_complexity 1 28 0 1928 141 0 21 chr2 1597622 1597947 -251658636 + AluSx SINE Alu 1 319 0 226 292 60 77 chr2 1598264 1598432 -251658151 + MIR SINE MIR 81 245 -17 770 282 18 0 chr2 1598565 1598785 -251657798 + MER58A DNA MER1_type 1 224 0 441 0 0 0 chr2 1601168 1601217 -251655366 + (TA)n Simple_repeat Simple_repeat 1 49 0 306 287 39 39 chr2 1601614 1601743 -251654840 + L2 LINE L2 1744 1872 -1442 433 188 0 26 chr2 1601823 1601940 -251654643 + CT-rich Low_complexity Low_complexity 3 116 0 389 299 81 11 chr2 1602052 1602323 -251654260 - LTR16A LTR ERVL -16 434 145 221 311 19 9 chr2 1602498 1602604 -251653979 + L2 LINE L2 2229 2335 -979 223 277 40 30 chr2 1603879 1603980 -251652603 - MER5A DNA MER1_type -74 115 14 214 373 77 21 chr2 1605708 1605941 -251650642 + L2 LINE L2 3006 3251 -62 180 111 0 0 chr2 1605981 1606008 -251650575 + (TGAA)n Simple_repeat Simple_repeat 3 29 0 452 232 48 16 chr2 1606543 1606668 -251649915 + L2 LINE L2 3185 3313 0 496 305 30 39 chr2 1607810 1608098 -251648485 + MLT1H1 LTR MaLR 12 297 -288 61 58 0 0 chr2 1609342 1609445 -251647138 + AT_rich Low_complexity Low_complexity 1 103 0 28 0 0 0 chr2 1611759 1611787 -251644796 + AT_rich Low_complexity Low_complexity 1 28 0 1898 98 4 23 chr2 1612501 1612765 -251643818 - AluSg SINE Alu -51 259 1 2312 90 0 13 chr2 1612767 1613068 -251643515 - AluSg SINE Alu -6 304 8 459 323 17 43 chr2 1613463 1613695 -251642888 + MIR SINE MIR 18 243 -19 360 0 0 0 chr2 1614128 1614168 -251642415 + (TG)n Simple_repeat Simple_repeat 1 40 0 180 0 0 0 chr2 1614167 1614187 -251642396 + (GA)n Simple_repeat Simple_repeat 1 20 0 * 1029 213 153 67 chr2 1614538 1614682 -251641901 + MLT1D LTR MaLR 1 131 -374 2065 130 138 5 chr2 1614682 1615060 -251641523 + MSTA LTR MaLR 1 428 0 1029 213 153 67 chr2 1615060 1615380 -251641203 + MLT1D LTR MaLR 131 505 0 2266 113 0 0 chr2 1615590 1615890 -251640693 - AluSx SINE Alu -12 300 1 321 315 87 8 chr2 1616727 1616854 -251639729 + L2 LINE L2 3136 3272 0 1177 73 12 6 chr2 1618380 1618545 -251638038 - L1PA13 LINE L1 -4 6159 5994 318 281 132 12 chr2 1619143 1619310 -251637273 + MIR SINE MIR 20 206 -56 1821 139 10 23 chr2 1619443 1619746 -251636837 - AluSq SINE Alu -14 299 1 21 0 0 0 chr2 1619927 1619948 -251636635 + AT_rich Low_complexity Low_complexity 1 21 0 355 340 69 14 chr2 1620061 1620349 -251636234 + L1 LINE L1 4031 4334 -1812 239 296 0 20 chr2 1620652 1620750 -251635833 + L1 LINE L1 4741 4836 -1310 2659 40 0 0 chr2 1620919 1621216 -251635367 + AluY SINE Alu 1 297 -14 2254 110 3 3 chr2 1623199 1623500 -251633083 - AluSc SINE Alu -8 301 1 3941 60 12 6 chr2 1623541 1624044 -251632539 + L1PA8 LINE L1 5662 6167 -5 1271 182 121 49 chr2 1625742 1626089 -251630494 + MLT1A2 LTR MaLR 1 372 -2 2823 85 3 6 chr2 1626415 1626780 -251629803 + THE1B LTR MaLR 1 364 0 2057 62 4 0 chr2 1627186 1627445 -251629138 + L1PA8 LINE L1 5662 5921 -251 11631 23 0 2 chr2 1628022 1630150 -251626433 + L1PA3 LINE L1 4031 6155 0 2225 85 0 72 chr2 1630630 1630968 -251625615 + AluSx SINE Alu 1 312 0 2393 90 3 0 chr2 1631715 1632025 -251624558 - AluY SINE Alu 0 311 1 1047 125 0 0 chr2 1632025 1632161 -251624422 - AluSq/x SINE Alu -177 136 1 21 0 0 0 chr2 1632605 1632626 -251623957 + AT_rich Low_complexity Low_complexity 1 21 0 2234 112 0 0 chr2 1633983 1634278 -251622305 - AluSx SINE Alu -16 296 2 421 97 0 0 chr2 1734278 1734340 -251522243 - Alu SINE Alu -256 62 1 337 221 11 11 chr2 1734369 1734464 -251522119 - L1PA16 LINE L1 -15 6151 6057 1306 200 69 145 chr2 1734468 1735034 -251521549 - MER66B-int LTR ERV1 -6153 523 1 2250 190 14 53 chr2 1735034 1735109 -251521474 - MER66B LTR ERV1 0 486 410 2060 141 3 3 chr2 1735109 1735407 -251521176 + AluSx SINE Alu 1 298 -14 2250 190 14 53 chr2 1735407 1735837 -251520746 - MER66B LTR ERV1 -76 410 1 320 347 91 21 chr2 1736947 1737232 -251519351 - L1M4 LINE L1 -1674 4472 4168 2310 53 0 0 chr2 1737237 1737501 -251519082 - AluY SINE Alu -46 265 2 256 109 0 0 chr2 1737507 1737553 -251519030 - L1P LINE L1 -3060 3086 3041 1167 94 0 13 chr2 1737559 1737708 -251518875 - AluSg SINE Alu -163 147 1 4073 199 17 3 chr2 1737708 1738603 -251517980 - L1 LINE L1 -1349 4797 3891 207 185 42 17 chr2 1738749 1738823 -251517760 - MIR SINE MIR -72 136 59 2616 61 0 3 chr2 1738848 1739160 -251517423 + AluY SINE Alu 1 311 0 207 0 0 0 chr2 1739404 1739427 -251517156 + (A)n Simple_repeat Simple_repeat 1 23 0 2541 91 0 0 chr2 1741429 1741738 -251514845 + AluSx SINE Alu 1 309 -3 2534 71 0 3 chr2 1743192 1743502 -251513081 - AluY SINE Alu -2 309 1 27 62 0 0 chr2 1743639 1743687 -251512896 + AT_rich Low_complexity Low_complexity 1 48 0 232 301 18 0 chr2 1743744 1743857 -251512726 + (TA)n Simple_repeat Simple_repeat 1 115 0 2330 97 0 7 chr2 1743939 1744238 -251512345 - AluSg SINE Alu -13 297 1 342 241 21 0 chr2 1744257 1744347 -251512236 + L1MC4 LINE L1 6550 6702 -1140 * 345 269 0 0 chr2 1744318 1744396 -251512187 - L1MC4 LINE L1 -1339 6703 6626 1077 68 0 0 chr2 1745402 1745534 -251511049 - AluSc SINE Alu -2 307 176 2316 96 0 3 chr2 1745950 1746243 -251510340 - AluSc SINE Alu -17 292 1 955 77 0 0 chr2 1746244 1746361 -251510222 - AluSc SINE Alu -192 117 1 1009 172 95 3 chr2 1747518 1747931 -251508652 + L1PA16 LINE L1 5926 6352 0 2032 89 4 0 chr2 1748541 1748789 -251507794 - AluSx SINE Alu -63 249 1 2287 102 10 0 chr2 1749401 1749695 -251506888 + AluSp SINE Alu 1 297 -16 2166 112 44 0 chr2 1750253 1750548 -251506035 + AluSx SINE Alu 3 310 -2 631 284 53 86 chr2 1751101 1751460 -251505123 + MER68 LTR ERV1 1 347 -215 2416 107 8 0 chr2 1751517 1751883 -251504700 - L1PB1 LINE L1 -1 6150 5782 343 344 0 0 chr2 1751908 1751998 -251504585 - L1MC4 LINE L1 -1339 6703 6614 * 351 225 25 25 chr2 1751947 1752027 -251504556 + L1MC4 LINE L1 6615 6694 -1348 386 287 67 0 chr2 1752134 1752284 -251504299 + L1M3f LINE L1 657 816 -4512 2167 131 3 10 chr2 1752284 1752598 -251503985 + AluSx SINE Alu 1 312 0 511 130 20 10 chr2 1752600 1752700 -251503883 + GA-rich Low_complexity Low_complexity 3 103 0 598 13 25 0 chr2 1752806 1752885 -251503698 + (GGAA)n Simple_repeat Simple_repeat 3 83 0 181 218 18 18 chr2 1753130 1753185 -251503398 - MIR SINE MIR -72 136 82 1443 216 7 0 chr2 1754779 1755061 -251501522 - ERVL LTR ERVL -1987 3777 3494 2397 102 0 0 chr2 1755156 1755460 -251501123 - AluSq SINE Alu -8 305 2 1379 182 4 16 chr2 1755473 1755720 -251500863 - ERVL LTR ERVL -2424 3340 3097 560 157 0 0 chr2 1755720 1755809 -251500774 - AluSg/x SINE Alu -15 295 207 2629 56 0 0 chr2 1755830 1756135 -251500448 - AluY SINE Alu -6 305 1 2156 117 0 13 chr2 1757132 1757432 -251499151 + AluSx SINE Alu 1 296 -16 2115 106 0 11 chr2 1757434 1757762 -251498821 + AluSg SINE Alu 1 325 0 643 166 101 0 chr2 1759343 1759482 -251497101 - L1MB5 LINE L1 -87 6087 5935 343 210 12 17 chr2 1759482 1759582 -251497001 + MER4D LTR ERV1 518 611 -168 430 123 27 0 chr2 1760846 1760919 -251495664 - FLAM_A SINE Alu -25 117 43 2637 40 0 7 chr2 1761475 1761779 -251494804 - AluY SINE Alu -9 302 1 2333 100 0 0 chr2 1762364 1762663 -251493920 + AluSx SINE Alu 1 299 -13 277 209 15 0 chr2 1763067 1763134 -251493449 - MIR SINE MIR -72 136 69 412 209 48 0 chr2 1763826 1763931 -251492652 + L1 LINE L1 3821 3930 -2216 1672 204 38 58 chr2 1764093 1764510 -251492073 + LTR2 LTR ERV1 41 449 0 3385 257 50 13 chr2 1764685 1766293 -251490290 - L1PBb LINE L1 -2082 4766 1008 482 272 51 31 chr2 1766478 1766732 -251489851 - L1PBb LINE L1 -5791 1058 800 262 220 17 0 chr2 1766816 1766875 -251489708 - L1PBb LINE L1 -6032 817 758 403 332 54 19 chr2 1767329 1767534 -251489049 - L1PBb LINE L1 -6428 421 210 380 282 178 0 chr2 1767676 1767878 -251488705 - L1PBb LINE L1 -6602 247 10 459 325 48 72 chr2 1768072 1768448 -251488135 - L1MEd LINE L1 -4901 1218 852 872 225 14 96 chr2 1768781 1769061 -251487522 + LTR42 LTR ERVL 3 259 -236 231 343 66 12 chr2 1769290 1769456 -251487127 + MER65A LTR ERV1 175 349 -96 * 2581 196 51 9 chr2 1769453 1769979 -251486604 - MER21A LTR ERV1 -8 923 376 1175 189 86 4 chr2 1769984 1770228 -251486355 - MER21A LTR ERV1 -667 264 1 851 314 4 4 chr2 1770315 1770554 -251486029 - MER8 DNA MER2_type 0 239 1 704 178 92 6 chr2 1770724 1770887 -251485696 + LTR42 LTR ERVL 315 491 -4 221 266 105 28 chr2 1775303 1775446 -251481137 + MIR3 SINE MIR 35 188 -20 344 271 51 11 chr2 1775622 1775840 -251480743 + MIR3 SINE MIR 15 243 -19 258 95 0 0 chr2 1775931 1775973 -251480610 + (TCC)n Simple_repeat Simple_repeat 1 42 0 477 298 148 22 chr2 1777164 1777611 -251478972 - L2 LINE L2 -1 3312 2810 1228 342 65 31 chr2 1778303 1778900 -251477683 + L1M4 LINE L1 2843 3473 -2673 417 86 0 0 chr2 1778900 1778958 -251477625 + (TG)n Simple_repeat Simple_repeat 1 58 0 1228 342 65 31 chr2 1778958 1779111 -251477472 + L1M4 LINE L1 3473 3619 -2527 1408 165 8 15 chr2 1779116 1779376 -251477207 + AluSx SINE Alu 3 260 -52 1329 201 15 6 chr2 1779396 1779725 -251476858 - L1 LINE L1 -1439 4707 4376 285 27 27 0 chr2 1779727 1779764 -251476819 + L1P5 LINE L1 5835 5872 -279 1040 134 0 0 chr2 1779768 1779917 -251476666 - AluJb SINE Alu -163 149 1 239 173 39 0 chr2 1780723 1780775 -251475808 - MIR SINE MIR -72 136 83 311 82 0 0 chr2 1782259 1782308 -251474275 + L1PB1 LINE L1 5342 5390 -761 2551 96 13 34 chr2 1782319 1782703 -251473880 + L1PB1 LINE L1 5776 6151 0 812 218 12 6 chr2 1782760 1782978 -251473605 - L1MB5 LINE L1 -293 5881 5659 1491 172 41 4 chr2 1782988 1783280 -251473303 - AluSx SINE Alu 0 307 6 255 254 54 0 chr2 1783913 1784043 -251472540 - Charlie2 DNA MER1_type -286 2576 2440 * 592 234 85 21 chr2 1784038 1784273 -251472310 - Charlie2 DNA MER1_type -577 2285 2036 1018 262 30 7 chr2 1784806 1785077 -251471506 + L1MB7 LINE L1 5887 6163 -21 1909 128 0 3 chr2 1785151 1785433 -251471150 + AluSq SINE Alu 1 281 -32 714 322 72 19 chr2 1785459 1785835 -251470748 + L1MCc LINE L1 50 445 -5978 585 260 36 49 chr2 1786077 1786300 -251470283 + L1MCc LINE L1 761 980 -5443 390 331 8 0 chr2 1786375 1786505 -251470078 + ERVL LTR ERVL 4147 4277 -1487 2230 104 7 0 chr2 1786963 1787272 -251469311 + AluSq SINE Alu 1 311 -2 1498 263 34 47 chr2 1787689 1787993 -251468590 + MLT1C LTR MaLR 2 299 -168 2433 65 0 3 chr2 1787993 1788303 -251468280 + AluY SINE Alu 1 309 -2 1498 263 34 47 chr2 1788303 1788470 -251468113 + MLT1C LTR MaLR 299 467 0 565 172 10 10 chr2 1788761 1788860 -251467723 + U6 snRNA snRNA 5 103 -4 350 62 0 62 chr2 1789026 1789090 -251467493 - AluSp/q SINE Alu 0 303 244 1240 93 0 0 chr2 1789090 1789252 -251467331 - AluSc SINE Alu -25 284 123 380 283 0 11 chr2 1789272 1789364 -251467219 - L1MC4 LINE L1 -1338 6704 6614 * 403 232 0 53 chr2 1789285 1789380 -251467203 + L1MC4 LINE L1 6614 6703 -1339 315 221 29 15 chr2 1789335 1789403 -251467180 - L1MCa LINE L1 -4362 2064 1996 * 300 238 59 50 chr2 1789465 1789566 -251467017 + L1MCc LINE L1 2478 2579 -4362 * 371 312 0 18 chr2 1789530 1789639 -251466944 - L1MC4 LINE L1 -1322 6720 6614 312 214 43 29 chr2 1789692 1789762 -251466821 - L1MCa LINE L1 -4361 2065 1995 301 337 0 22 chr2 1789693 1789782 -251466801 + L1MC4 LINE L1 6617 6703 -1339 * 354 252 0 28 chr2 1789781 1789888 -251466695 - L1MCa LINE L1 -1339 6983 1995 228 239 23 0 chr2 1789900 1789988 -251466595 - L1MC4 LINE L1 -1339 6703 6614 321 305 10 0 chr2 1790000 1790099 -251466484 - L1MC4 LINE L1 -1339 6983 1996 * 324 212 45 0 chr2 1790072 1790138 -251466445 - L1MC4 LINE L1 -4362 2064 1996 396 237 60 0 chr2 1790166 1790268 -251466315 - L1MC4 LINE L1 -1339 6983 1986 252 140 80 0 chr2 1790297 1790347 -251466236 + MLT2A1 LTR ERVL 391 444 0 2022 281 81 7 chr2 1790347 1790937 -251465646 - L1M2a LINE L1 -6376 792 159 2092 221 11 33 chr2 1790938 1791218 -251465365 + L1PA15-16 LINE L1 1771 2056 -4741 2230 102 3 6 chr2 1791218 1791531 -251465052 + AluSq SINE Alu 1 312 -1 2092 221 11 33 chr2 1791531 1791974 -251464609 + L1PA15-16 LINE L1 2056 2488 -4309 420 56 0 0 chr2 1791974 1792028 -251464555 - Alu SINE Alu -11 300 247 5565 205 62 11 chr2 1792042 1792248 -251464335 + L1M1 LINE L1 271 465 -7100 2130 124 0 3 chr2 1792248 1792555 -251464028 - AluSg SINE Alu -4 306 1 5565 205 62 11 chr2 1792555 1793486 -251463097 + L1M1 LINE L1 465 1465 -6100 2289 82 0 7 chr2 1793487 1793814 -251462769 - AluSp SINE Alu 0 313 2 2338 75 0 28 chr2 1793933 1794253 -251462330 - AluY SINE Alu 0 311 1 322 266 37 40 chr2 1794430 1794570 -251462013 + L1MC4 LINE L1 1919 6983 -1339 1417 210 0 7 chr2 1794571 1794857 -251461726 - AluJo SINE Alu -26 286 3 211 250 29 15 chr2 1798890 1798958 -251457625 + MIR3 SINE MIR 93 161 -47 349 274 58 2 chr2 1799087 1799245 -251457338 + MIR SINE MIR 21 187 -65 374 288 40 19 chr2 1799556 1799790 -251456793 + MIR SINE MIR 10 250 -12 195 42 0 0 chr2 1799885 1799909 -251456674 + (TCC)n Simple_repeat Simple_repeat 1 24 0 543 297 149 14 chr2 1801064 1801508 -251455075 - L2 LINE L2 0 3313 2810 682 329 105 19 chr2 1802215 1802643 -251453940 + L1M4 LINE L1 2855 3319 -2827 477 103 64 0 chr2 1802657 1802735 -251453848 - L1PA13 LINE L1 0 6163 6081 2199 78 3 0 chr2 1802755 1803062 -251453521 - AluSx SINE Alu 0 308 1 2081 100 3 47 chr2 1803590 1803932 -251452651 - AluY SINE Alu 0 311 1 1700 158 3 7 chr2 1803936 1804220 -251452363 - AluJb SINE Alu -21 291 9 1265 105 18 11 chr2 1804787 1804999 -251451584 - MLT2A2 LTR ERVL 0 453 286 368 282 35 38 chr2 1805220 1805447 -251451136 + MIR SINE MIR 10 243 -19 1633 136 20 37 chr2 1805775 1806069 -251450514 - AluJb SINE Alu -11 301 13 1650 154 0 25 chr2 1806122 1806407 -251450176 + AluJb SINE Alu 19 296 -16 234 0 0 0 chr2 1806407 1806433 -251450150 + (TA)n Simple_repeat Simple_repeat 2 27 0 2421 47 7 0 chr2 1806976 1807275 -251449308 - AluY SINE Alu -10 301 1 2255 102 0 9 chr2 1807778 1808093 -251448490 - AluSx SINE Alu 0 312 1 198 0 0 0 chr2 1809132 1809154 -251447429 + (TA)n Simple_repeat Simple_repeat 2 23 0 1278 221 3 0 chr2 1809172 1809457 -251447126 - AluJo SINE Alu -19 293 8 481 333 23 27 chr2 1814011 1814230 -251442353 - L1MCc LINE L1 -5978 445 228 513 311 118 52 chr2 1814345 1814476 -251442107 + L1ME3 LINE L1 5480 5601 -561 1999 111 3 55 chr2 1814476 1814801 -251441782 + AluSg SINE Alu 1 308 -2 513 311 118 52 chr2 1814801 1815135 -251441448 + L1ME3 LINE L1 5601 5976 -186 4316 185 24 23 chr2 1815310 1815440 -251441143 - L1MA4 LINE L1 -7 6293 6165 1877 141 3 0 chr2 1815440 1815731 -251440852 - AluSx SINE Alu -20 292 1 4316 185 24 23 chr2 1815731 1816466 -251440117 - L1MA4 LINE L1 -135 6165 5427 3760 203 21 5 chr2 1817219 1818153 -251438430 + L1 LINE L1 4342 5290 -856 355 312 51 65 chr2 1819310 1819586 -251436997 - L1MEd LINE L1 -4920 1199 928 1945 137 0 3 chr2 1819600 1819892 -251436691 - AluSq SINE Alu -20 293 3 1322 230 3 0 chr2 1820897 1821201 -251435382 - AluJo SINE Alu 0 312 8 184 295 16 0 chr2 1822718 1822779 -251433804 + MIR SINE MIR 82 143 -65 755 189 53 6 chr2 1823218 1823387 -251433196 - LTR42 LTR ERVL -4 491 315 213 39 0 0 chr2 1823505 1823531 -251433052 + (TAAAAA)n Simple_repeat Simple_repeat 3 28 0 928 289 4 4 chr2 1823558 1823790 -251432793 + MER8 DNA MER2_type 2 233 -6 2075 215 71 9 chr2 1823882 1824513 -251432070 + MER21A LTR ERV1 1 782 -149 949 56 0 0 chr2 1824507 1824632 -251431951 + LTR10C LTR ERV1 96 220 -371 * 21 36 0 0 chr2 1826098 1826126 -251430457 + AT_rich Low_complexity Low_complexity 1 28 0 1965 215 88 19 chr2 1826295 1826761 -251429822 + L1P LINE L1 11 508 -5638 1424 210 4 4 chr2 1827085 1827361 -251429222 - AluJo SINE Alu -26 286 11 2138 105 32 0 chr2 1829269 1829554 -251427029 + AluSg1 SINE Alu 1 294 -15 1108 36 7 0 chr2 1830547 1830685 -251425898 - L1PA4 LINE L1 -2 6153 6015 563 206 201 40 chr2 1831047 1831246 -251425337 - MLT1D LTR MaLR -3 502 272 208 308 0 0 chr2 1831246 1831311 -251425272 + (TAGA)n Simple_repeat Simple_repeat 2 66 0 190 257 115 35 chr2 1933453 1933566 -251323017 - MER5C DNA MER1_type -202 122 1 972 264 54 20 chr2 1934150 1934502 -251322081 + MLT1A1 LTR MaLR 2 365 0 568 241 41 6 chr2 1935758 1935928 -251320655 - MLT1B LTR MaLR -6 384 209 238 83 0 56 chr2 1936023 1936059 -251320524 - MLT1B LTR MaLR -356 34 1 517 274 148 16 chr2 1936800 1937173 -251319410 + L2 LINE L2 2244 2665 -649 1073 163 24 0 chr2 1938263 1938472 -251318111 + L1MA4 LINE L1 6081 6294 -6 383 200 0 11 chr2 1938480 1938570 -251318013 + GA-rich Low_complexity Low_complexity 3 91 0 396 0 0 0 chr2 1939388 1939432 -251317151 + (TG)n Simple_repeat Simple_repeat 1 44 0 2007 104 54 17 chr2 1941157 1941455 -251315128 - AluY SINE Alu -2 309 1 406 311 67 16 chr2 1942384 1942577 -251314006 - MIR SINE MIR -51 211 9 558 238 41 74 chr2 1942595 1942960 -251313623 - L1MC5 LINE L1 -35 7926 7574 239 253 13 0 chr2 1943565 1943644 -251312939 + GA-rich Low_complexity Low_complexity 1 80 0 544 161 8 15 chr2 1943667 1943797 -251312786 + GA-rich Low_complexity Low_complexity 4 132 0 292 264 56 16 chr2 1944718 1944843 -251311740 + MIR SINE MIR 89 218 -44 249 282 84 0 chr2 1945035 1945106 -251311477 - MIR3 SINE MIR -37 171 95 2314 113 50 14 chr2 1945186 1945548 -251311035 + THE1C LTR MaLR 1 375 0 309 350 122 0 chr2 1945928 1946108 -251310475 + L3 LINE CR1 1284 1485 -92 209 310 11 23 chr2 1946377 1946464 -251310119 + L2 LINE L2 3227 3312 -1 313 308 58 24 chr2 1946724 1946932 -251309651 + L1ME LINE L1 5590 5804 -317 2024 135 0 0 chr2 1946978 1947260 -251309323 + AluSx SINE Alu 1 282 -30 26 30 0 0 chr2 1947456 1947489 -251309094 + AT_rich Low_complexity Low_complexity 1 33 0 218 213 82 0 chr2 1948058 1948119 -251308464 + MIR SINE MIR 107 172 -90 2016 98 10 49 chr2 1948895 1949201 -251307382 - AluSc SINE Alu -15 294 1 2126 133 0 3 chr2 1950159 1950467 -251306116 - AluSg SINE Alu -3 307 1 234 116 0 0 chr2 1951132 1951175 -251305408 + (CA)n Simple_repeat Simple_repeat 2 44 0 1934 80 8 0 chr2 1951202 1951451 -251305132 + AluSp SINE Alu 43 293 -20 255 243 0 43 chr2 1951782 1951852 -251304731 + MIR3 SINE MIR 126 192 -16 406 315 118 0 chr2 1952313 1952516 -251304067 - MIR SINE MIR -28 234 8 794 192 83 33 chr2 1952680 1952920 -251303663 + Charlie5 DNA MER1_type 2334 2585 -27 449 253 59 24 chr2 1954871 1955041 -251301542 + MER5B DNA MER1_type 3 178 0 247 271 52 84 chr2 1959152 1959307 -251297276 + L3 LINE CR1 1426 1575 -2 978 107 0 0 chr2 1959713 1959890 -251296693 + (GA)n Simple_repeat Simple_repeat 2 178 0 637 159 0 12 chr2 1959891 1960061 -251296522 + GA-rich Low_complexity Low_complexity 2 169 0 236 240 10 0 chr2 1960077 1960177 -251296406 + GA-rich Low_complexity Low_complexity 2 102 0 2323 97 0 3 chr2 1963029 1963337 -251293246 - AluSc SINE Alu -2 307 1 218 266 16 0 chr2 1965379 1965461 -251291122 + (TCTCTG)n Simple_repeat Simple_repeat 1 83 0 185 304 38 0 chr2 1965592 1965671 -251290912 - L2 LINE L2 -7 3306 3225 21 0 0 0 chr2 1965711 1965732 -251290851 + AT_rich Low_complexity Low_complexity 1 21 0 1860 144 29 13 chr2 1965733 1966039 -251290544 + AluJo SINE Alu 1 311 -1 451 248 57 0 chr2 1968853 1968958 -251287625 - MER58A DNA MER1_type 0 114 4 711 173 74 20 chr2 1969078 1969280 -251287303 + MER33 DNA MER1_type 21 233 -91 1758 148 184 11 chr2 1969754 1970119 -251286464 - MSTA LTR MaLR 0 428 1 313 226 22 50 chr2 1972122 1972303 -251284280 + (CACTA)n Simple_repeat Simple_repeat 4 179 0 215 277 0 58 chr2 1972279 1972467 -251284116 + (CACTC)n Simple_repeat Simple_repeat 2 178 0 * 240 284 0 62 chr2 1972376 1972552 -251284031 + (CACTT)n Simple_repeat Simple_repeat 3 167 0 * 302 224 18 64 chr2 1972435 1973012 -251283571 + (CACTA)n Simple_repeat Simple_repeat 1 550 0 215 283 6 50 chr2 1973265 1973424 -251283159 + (CACTC)n Simple_repeat Simple_repeat 2 153 0 279 227 0 57 chr2 1973424 1973600 -251282983 + (CTATA)n Simple_repeat Simple_repeat 1 166 0 329 230 0 73 chr2 1973694 1973885 -251282698 + (CTACT)n Simple_repeat Simple_repeat 3 179 0 276 245 0 58 chr2 1974025 1974213 -251282370 + (CTATA)n Simple_repeat Simple_repeat 1 177 0 205 274 0 60 chr2 1974274 1974442 -251282141 + (CTTTA)n Simple_repeat Simple_repeat 5 162 0 394 218 0 52 chr2 1974494 1974668 -251281915 + (CACTA)n Simple_repeat Simple_repeat 3 167 0 1722 167 0 7 chr2 1976514 1976789 -251279794 + AluJb SINE Alu 1 273 -39 180 0 0 0 chr2 1978737 1978757 -251277826 + (TTTAA)n Simple_repeat Simple_repeat 3 22 0 1053 117 0 0 chr2 1978757 1978902 -251277681 - L1PA10 LINE L1 -19 6149 6005 2101 131 0 0 chr2 1978902 1979237 -251277346 + L1P LINE L1 4681 5015 -1131 2077 133 0 22 chr2 1980986 1981302 -251275281 - AluY SINE Alu -2 309 1 26 74 0 0 chr2 1981775 1981829 -251274754 + AT_rich Low_complexity Low_complexity 1 54 0 192 77 0 0 chr2 1983938 1983964 -251272619 + (TA)n Simple_repeat Simple_repeat 2 27 0 277 301 18 9 chr2 1991052 1991165 -251265418 + GA-rich Low_complexity Low_complexity 1 114 0 24 0 0 0 chr2 1992006 1992030 -251264553 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr2 1992505 1992527 -251264056 + AT_rich Low_complexity Low_complexity 1 22 0 324 0 0 0 chr2 1995895 1995931 -251260652 + (CA)n Simple_repeat Simple_repeat 2 37 0 302 138 17 0 chr2 1996448 1996506 -251260077 + (TG)n Simple_repeat Simple_repeat 2 60 0 195 42 0 0 chr2 1997407 1997431 -251259152 + (TC)n Simple_repeat Simple_repeat 2 25 0 225 0 0 0 chr2 1997433 1997458 -251259125 + (CA)n Simple_repeat Simple_repeat 1 25 0 226 244 0 0 chr2 1997906 1997951 -251258632 + (CATATA)n Simple_repeat Simple_repeat 4 48 0 192 97 0 0 chr2 1998842 1998873 -251257710 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 1501 153 91 28 chr2 1999977 2000264 -251256319 + MER1B DNA MER1_type 35 339 0 26 0 0 0 chr2 2000624 2000650 -251255933 + AT_rich Low_complexity Low_complexity 1 26 0 248 375 0 0 chr2 2001002 2001090 -251255493 + LTR67 LTR ERVL 108 195 -362 753 209 0 0 chr2 2001977 2002111 -251254472 + FRAM SINE Alu 1 129 -47 3477 20 0 0 chr2 2002112 2002514 -251254069 + L1PA4 LINE L1 5752 6153 -2 552 63 13 0 chr2 2002593 2002672 -251253911 - L1PA4 LINE L1 -3 6152 6073 281 258 50 17 chr2 2004155 2004275 -251252308 + LTR67 LTR ERVL 434 557 0 306 256 202 8 chr2 2004878 2005007 -251251576 + MER5A DNA MER1_type 36 189 0 607 225 144 32 chr2 2005015 2005178 -251251405 - MER33 DNA MER1_type -2261 324 181 2209 104 3 0 chr2 2005178 2005475 -251251108 - AluSp SINE Alu -15 298 1 2118 122 3 0 chr2 2005475 2005763 -251250820 - AluSg SINE Alu -21 289 1 607 225 144 32 chr2 2005763 2005882 -251250701 - MER33 DNA MER1_type -2403 182 9 296 245 157 20 chr2 2006855 2006957 -251249626 - MIR3 SINE MIR -6 202 87 340 173 0 19 chr2 2006962 2007066 -251249517 + GA-rich Low_complexity Low_complexity 1 102 0 548 295 50 42 chr2 2009184 2009425 -251247158 + MIR SINE MIR 12 254 -8 1331 230 65 68 chr2 2010140 2010858 -251245725 - L1MC5 LINE L1 -697 7264 6542 2057 134 90 3 chr2 2010875 2011210 -251245373 - THE1B LTR MaLR 0 364 1 306 73 0 0 chr2 2012069 2012110 -251244473 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 22 0 0 0 chr2 2013005 2013027 -251243556 + AT_rich Low_complexity Low_complexity 1 22 0 36 53 0 0 chr2 2013217 2013274 -251243309 + AT_rich Low_complexity Low_complexity 1 57 0 342 309 26 26 chr2 2015199 2015351 -251241232 - MIR SINE MIR 0 262 111 1740 80 16 0 chr2 2015373 2015723 -251240860 - L1P3 LINE L1 -634 5520 5167 823 30 20 0 chr2 2015725 2015826 -251240757 + L1PA7 LINE L1 6050 6152 -2 25 31 0 0 chr2 2016046 2016078 -251240505 + AT_rich Low_complexity Low_complexity 1 32 0 1049 99 43 0 chr2 2016228 2016369 -251240214 + AluSg/x SINE Alu 154 300 -12 776 256 94 3 chr2 2016912 2017221 -251239362 + L1MD3 LINE L1 7659 7995 0 641 76 11 0 chr2 2017434 2017526 -251239057 + (TTTC)n Simple_repeat Simple_repeat 4 96 0 28 29 0 0 chr2 2017561 2017596 -251238987 + AT_rich Low_complexity Low_complexity 1 35 0 1964 222 0 22 chr2 2018223 2018722 -251237861 + L1PB4 LINE L1 2226 2713 -3433 200 59 29 0 chr2 2018737 2018771 -251237812 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 1198 67 6 0 chr2 2018776 2018941 -251237642 - L1PA8A LINE L1 -28 6103 5938 10215 193 29 21 chr2 2018944 2022304 -251234279 + L1PB4 LINE L1 2703 6090 -66 273 172 0 0 chr2 2022356 2022414 -251234169 + L1PB4 LINE L1 6097 6154 -2 256 219 14 14 chr2 2022824 2022897 -251233686 - MLT2E LTR ERVL -525 103 31 616 277 27 31 chr2 2023593 2023817 -251232766 - MIR SINE MIR 0 262 40 3298 183 110 97 chr2 2023941 2024468 -251232115 - L1MC3 LINE L1 -60 7725 7206 248 220 30 40 chr2 2024468 2024568 -251232015 - MLT1F1 LTR MaLR -445 122 24 3298 183 110 97 chr2 2024568 2024608 -251231975 - L1MC3 LINE L1 -579 7206 7168 834 247 70 78 chr2 2024608 2025005 -251231578 + MSTD LTR MaLR 1 394 -2 3298 183 110 97 chr2 2025005 2025576 -251231007 - L1MC3 LINE L1 -617 7168 6499 1669 98 0 9 chr2 2026358 2026582 -251230001 - L1PA8 LINE L1 0 6172 5951 923 279 153 28 chr2 2027163 2027869 -251228714 + HAL1 LINE L1 841 1634 -873 239 0 32 0 chr2 2027873 2027904 -251228679 + (TAGA)n Simple_repeat Simple_repeat 4 35 0 234 253 157 12 chr2 2028031 2028114 -251228469 + MLT1L LTR MaLR 196 290 -325 1060 308 107 36 chr2 2028359 2029164 -251227419 + HAL1 LINE L1 1646 2507 0 291 311 133 0 chr2 2029627 2029778 -251226805 - MLT1E2 LTR MaLR -144 482 312 628 261 39 93 chr2 2031397 2031753 -251224830 - MER46C DNA MER2_type 0 338 2 240 111 0 0 chr2 2031870 2031906 -251224677 + (CA)n Simple_repeat Simple_repeat 1 36 0 291 122 0 0 chr2 2033088 2033137 -251223446 + (TC)n Simple_repeat Simple_repeat 1 49 0 3152 178 85 15 chr2 2033451 2033685 -251222898 - L1MC1 LINE L1 0 6333 6117 2760 91 31 0 chr2 2033685 2034038 -251222545 + THE1B LTR MaLR 1 364 0 3152 178 85 15 chr2 2034038 2034473 -251222110 - L1MC1 LINE L1 -216 6117 5634 17556 83 4 12 chr2 2035044 2036989 -251219594 - L1PA7 LINE L1 -2 6152 4250 1714 81 0 136 chr2 2036989 2037299 -251219284 - AluY SINE Alu 0 311 44 17556 83 4 12 chr2 2037299 2038451 -251218132 - L1PA7 LINE L1 -1904 4250 3090 16932 123 14 21 chr2 2038451 2041196 -251215387 - L1P LINE L1 -2823 3323 598 371 329 71 19 chr2 2041480 2041690 -251214893 - MIR SINE MIR -1 261 41 221 325 0 24 chr2 2041948 2042019 -251214564 + L2 LINE L2 2323 2391 -923 319 241 44 95 chr2 2042019 2042177 -251214406 + MER5A DNA MER1_type 1 150 -39 274 313 141 50 chr2 2042202 2042620 -251213963 + L2 LINE L2 2397 2852 -462 188 310 31 78 chr2 2042802 2042931 -251213652 + MIR SINE MIR 65 187 -75 590 203 20 43 chr2 2043044 2043197 -251213386 + THE1C LTR MaLR 1 154 -262 9926 120 52 6 chr2 2043197 2044667 -251211916 + THE1C-int LTR MaLR 42 1579 -1 1838 144 88 31 chr2 2044670 2045023 -251211560 + THE1C LTR MaLR 3 375 0 828 290 90 24 chr2 2045920 2046599 -251209984 + L1M4 LINE L1 2972 3695 -2451 2155 169 40 33 chr2 2046741 2047287 -251209296 + MLT2A2 LTR ERVL 2 554 0 331 263 70 18 chr2 2047475 2047589 -251208994 + HAL1 LINE L1 22 141 -2366 388 302 35 12 chr2 2047770 2047942 -251208641 + HAL1 LINE L1 157 332 -2175 923 302 46 62 chr2 2047944 2048726 -251207857 + L2 LINE L2 2538 3310 -3 639 183 48 22 chr2 2048876 2049015 -251207568 - MLT1E1 LTR MaLR -6 637 406 653 360 115 10 chr2 2049061 2049555 -251207028 - L2 LINE L2 -482 2832 2287 231 337 123 16 chr2 2050340 2050527 -251206056 + L2 LINE L2 1876 2082 -1232 2136 89 13 23 chr2 2050580 2050905 -251205678 - AluY SINE Alu 0 322 1 1013 283 84 79 chr2 2051250 2051479 -251205104 + L2 LINE L2 2287 2514 -799 3401 66 0 0 chr2 2051479 2051887 -251204696 - L1PA8 LINE L1 0 6172 5765 1013 283 84 79 chr2 2051887 2052332 -251204251 + L2 LINE L2 2514 2956 -357 2568 156 46 2 chr2 2052332 2052742 -251203841 - MSTA LTR MaLR 0 428 1 6805 191 84 44 chr2 2052742 2054259 -251202324 - MSTA-int LTR MaLR 0 1580 3 2723 110 34 53 chr2 2054261 2054641 -251201942 - MSTA LTR MaLR 0 428 55 2257 95 0 46 chr2 2054641 2054966 -251201617 - AluSg SINE Alu 0 310 1 2723 110 34 53 chr2 2054966 2055021 -251201562 - MSTA LTR MaLR -373 55 1 1013 283 84 79 chr2 2055021 2055344 -251201239 + L2 LINE L2 2956 3313 0 374 320 39 20 chr2 2055671 2055824 -251200759 + MIR3 SINE MIR 27 182 -26 280 300 125 31 chr2 2056840 2057000 -251199583 - L2 LINE L2 0 3272 3098 257 122 0 0 chr2 2057166 2057207 -251199376 + AluSx SINE Alu 1 41 -259 2045 118 0 0 chr2 2057207 2057479 -251199104 + AluSx SINE Alu 19 290 -22 2233 81 0 0 chr2 2057486 2057809 -251198774 + AluY SINE Alu 9 331 0 1606 150 4 33 chr2 2058436 2058710 -251197873 + AluJo SINE Alu 38 303 -9 1185 209 41 55 chr2 2058742 2059103 -251197480 + MSTB2 LTR MaLR 41 457 0 236 333 0 0 chr2 2060648 2060714 -251195869 - L1MCc LINE L1 -3407 3534 3469 1407 208 19 55 chr2 2060745 2061130 -251195453 - MLT1A2 LTR MaLR -2 465 1 1216 253 65 46 chr2 2061228 2061950 -251194633 - L1MCc LINE L1 -4891 1532 1184 2306 108 0 0 chr2 2062024 2062320 -251194263 - AluSx SINE Alu -16 296 1 250 325 75 12 chr2 2062358 2062651 -251193932 + L1P LINE L1 4092 4408 -1738 22 0 0 0 chr2 2064423 2064445 -251192138 + AT_rich Low_complexity Low_complexity 1 22 0 2424 106 140 11 chr2 2066195 2066574 -251190009 - MSTA LTR MaLR 0 428 1 242 337 99 51 chr2 2066592 2067458 -251189125 + L2 LINE L2 1976 2883 -431 232 274 129 48 chr2 2067587 2067711 -251188872 + L2 LINE L2 3139 3272 0 757 300 64 54 chr2 2067749 2068172 -251188411 - L2 LINE L2 -2 3311 2885 305 289 33 0 chr2 2068474 2068595 -251187988 + L1ME4a LINE L1 5769 5893 -228 412 332 88 45 chr2 2069521 2070009 -251186574 + HAL1 LINE L1 597 1105 -1402 504 304 175 31 chr2 2070080 2070687 -251185896 + HAL1 LINE L1 1450 2193 -314 1689 193 116 30 chr2 2070687 2071117 -251185466 + MLT1C LTR MaLR 1 467 0 504 304 175 31 chr2 2071117 2071279 -251185304 + HAL1 LINE L1 2193 2330 -177 346 285 39 31 chr2 2071385 2071515 -251185068 - MIR SINE MIR -34 228 98 1242 151 130 50 chr2 2071519 2071818 -251184765 - L1MA6 LINE L1 -366 5934 5612 199 317 17 0 chr2 2071818 2071878 -251184705 - MIR SINE MIR -188 74 14 180 179 0 0 chr2 2072042 2072081 -251184502 + (TG)n Simple_repeat Simple_repeat 1 39 0 264 122 0 0 chr2 2072133 2072174 -251184409 - MADE1 DNA Mariner -39 41 1 966 288 137 24 chr2 2072222 2072805 -251183778 + L1ME3A LINE L1 5522 6170 0 1302 155 132 78 chr2 2072879 2073175 -251183408 + AluJb SINE Alu 1 312 0 2080 106 3 56 chr2 2073758 2074079 -251182504 + AluSg SINE Alu 1 304 -6 282 343 10 0 chr2 2074537 2074639 -251181944 - L1MCc LINE L1 -5984 439 337 2141 125 3 3 chr2 2076760 2077071 -251179512 - AluJo SINE Alu -1 311 1 180 289 105 13 chr2 2077277 2077353 -251179230 + L2 LINE L2 3200 3282 -31 2487 59 0 3 chr2 2077378 2077681 -251178902 + AluSq SINE Alu 1 302 -11 1782 73 4 9 chr2 2077683 2077916 -251178667 + AluSg SINE Alu 1 232 -78 263 119 24 0 chr2 2078016 2078058 -251178525 - AluJ/FLAM SINE Alu -239 63 21 2288 121 0 0 chr2 2078223 2078521 -251178062 + AluSq SINE Alu 1 298 -15 438 262 32 40 chr2 2079222 2079348 -251177235 - MIR3 SINE MIR -70 138 14 367 20 0 0 chr2 2079981 2080030 -251176553 - AluY SINE Alu 0 300 252 1145 66 66 0 chr2 2080030 2080182 -251176401 - AluSg/x SINE Alu -20 290 129 2342 102 0 10 chr2 2080191 2080505 -251176078 - AluSx SINE Alu -1 311 1 254 167 27 59 chr2 2080606 2080722 -251175861 + MSR1 Satellite Satellite 1 112 -25 1446 46 0 23 chr2 2080829 2081003 -251175580 - AluY SINE Alu -141 170 1 236 232 18 0 chr2 2081007 2081063 -251175520 + MER3 DNA MER1_type 153 209 0 260 277 127 41 chr2 2081075 2081295 -251175288 - L2 LINE L2 -1177 2137 1899 200 262 131 0 chr2 2081459 2081520 -251175063 - MIR SINE MIR -61 147 79 291 230 0 52 chr2 2081617 2081791 -251174792 + (CCCCAG)n Simple_repeat Simple_repeat 1 165 0 314 223 0 51 chr2 2081807 2081982 -251174601 + (CCCCAG)n Simple_repeat Simple_repeat 1 166 0 299 236 0 52 chr2 2082035 2082209 -251174374 + (CCCCAG)n Simple_repeat Simple_repeat 1 165 0 198 347 53 32 chr2 2083885 2083980 -251172603 + L2 LINE L2 3200 3296 -17 23 62 0 0 chr2 2086390 2086422 -251170161 + GC_rich Low_complexity Low_complexity 1 32 0 543 83 0 0 chr2 2086586 2086658 -251169925 + Alu SINE Alu 230 301 -9 355 282 105 24 chr2 2086660 2086784 -251169799 - MIR SINE MIR -21 241 108 244 272 71 71 chr2 2087082 2087251 -251169332 + L2 LINE L2 2938 3106 -166 285 98 0 0 chr2 2088908 2088949 -251167634 + (CA)n Simple_repeat Simple_repeat 2 42 0 1586 129 113 4 chr2 2089349 2089440 -251167143 + AluSx SINE Alu 25 105 -207 2143 93 7 0 chr2 2089440 2089751 -251166832 + AluSg SINE Alu 1 313 0 1586 129 113 4 chr2 2089751 2089914 -251166669 + AluSx SINE Alu 105 308 -4 1041 185 158 68 chr2 2089916 2090050 -251166533 + AluJo SINE Alu 1 121 -181 2237 115 3 3 chr2 2090050 2090346 -251166237 + AluSg SINE Alu 1 296 -14 1041 185 158 68 chr2 2090346 2090476 -251166107 + AluJo SINE Alu 121 289 -13 551 197 63 0 chr2 2091047 2091174 -251165409 - Charlie1 DNA MER1_type 0 2761 2627 546 237 103 5 chr2 2091176 2091370 -251165213 - Charlie1 DNA MER1_type -2547 214 2 194 270 95 14 chr2 2092367 2092441 -251164142 - MIR SINE MIR -72 190 111 762 218 98 10 chr2 2092810 2093003 -251163580 - MIR SINE MIR -23 239 30 412 279 165 32 chr2 2093048 2093417 -251163166 - L2 LINE L2 -7 3265 2848 1174 59 0 0 chr2 2093797 2093932 -251162651 + AluSq/x SINE Alu 1 135 -178 1745 134 59 66 chr2 2093932 2094237 -251162346 + AluSx SINE Alu 1 303 -9 2238 91 18 0 chr2 2094239 2094524 -251162059 + AluSq SINE Alu 2 291 -22 1399 138 153 15 chr2 2094543 2094804 -251161779 + AluJo SINE Alu 1 297 -15 345 275 22 11 chr2 2094804 2094895 -251161688 + MIR SINE MIR 59 150 -112 2029 156 0 0 chr2 2095041 2095329 -251161254 + AluJb SINE Alu 1 288 -24 525 238 79 114 chr2 2095442 2095732 -251160851 - L1ME LINE L1 -380 5790 5511 1605 187 74 19 chr2 2095759 2096122 -251160461 - MSTB1 LTR MaLR -6 426 44 3033 56 0 0 chr2 2096122 2096495 -251160088 - L1PA7 LINE L1 0 6154 5782 2705 48 0 0 chr2 2098336 2098647 -251157936 - AluY SINE Alu 0 311 1 236 330 50 0 chr2 2098991 2099091 -251157492 + L2 LINE L2 3202 3306 -7 1245 314 66 76 chr2 2100902 2101475 -251155108 - L1M4 LINE L1 -2053 4093 3533 228 111 0 0 chr2 2101475 2101511 -251155072 + (ATG)n Simple_repeat Simple_repeat 2 37 0 1245 314 66 76 chr2 2101511 2101908 -251154675 - L1M4 LINE L1 -2613 3533 3133 22 56 0 0 chr2 2102167 2102203 -251154380 + AT_rich Low_complexity Low_complexity 1 36 0 989 248 13 9 chr2 2102296 2102614 -251153969 + L1 LINE L1 4304 4622 -1524 216 342 13 0 chr2 2102726 2102805 -251153778 + MIR SINE MIR 164 243 -19 22 0 0 0 chr2 2102939 2102961 -251153622 + AT_rich Low_complexity Low_complexity 1 22 0 645 227 51 60 chr2 2103760 2103976 -251152607 + MER20 DNA MER1_type 4 217 -2 305 302 65 51 chr2 2105281 2105556 -251151027 + HERVL LTR ERVL 5002 5280 -374 511 293 70 64 chr2 2106238 2106566 -251150017 + L1MC/D LINE L1 4039 4368 -1778 234 304 177 6 chr2 2106576 2106734 -251149849 - LTR33 LTR ERVL -8 513 329 448 363 46 31 chr2 2107115 2107440 -251149143 + L1MC/D LINE L1 4507 4836 -1310 708 269 48 35 chr2 2107527 2107754 -251148829 - MIR SINE MIR -7 255 26 25 65 0 0 chr2 2107820 2107866 -251148717 + AT_rich Low_complexity Low_complexity 1 46 0 444 272 32 13 chr2 2108075 2108233 -251148350 + L1MC/D LINE L1 5315 5475 -2333 590 281 45 45 chr2 2108349 2108570 -251148013 + L2 LINE L2 2650 2870 -444 645 245 119 42 chr2 2108598 2108884 -251147699 - L1ME3A LINE L1 -18 6152 5845 1285 203 33 46 chr2 2109488 2109794 -251146789 + AluJo SINE Alu 1 302 0 5216 30 0 2 chr2 2110188 2110794 -251145789 - L1PA4 LINE L1 -1 6154 5550 1314 111 11 69 chr2 2110904 2111166 -251145417 - L1MA9 LINE L1 0 6312 6066 22 0 0 0 chr2 2111536 2111558 -251145025 + AT_rich Low_complexity Low_complexity 1 22 0 248 330 37 9 chr2 2111711 2111820 -251144763 + MIR SINE MIR 51 162 -100 4416 227 64 25 chr2 2111824 2112047 -251144536 + L1MB8 LINE L1 3722 3935 -2249 207 0 0 0 chr2 2112047 2112070 -251144513 + (TAA)n Simple_repeat Simple_repeat 1 23 0 4416 227 64 25 chr2 2112070 2113348 -251143235 + L1MB8 LINE L1 3935 5323 -861 1979 123 87 98 chr2 2113348 2113786 -251142797 - Tigger2a DNA MER2_type -1 433 1 4416 227 64 25 chr2 2113786 2114269 -251142314 + L1MB8 LINE L1 5323 5786 -398 364 237 34 17 chr2 2114389 2114507 -251142076 + L1MB8 LINE L1 6039 6158 -20 1520 240 9 3 chr2 2114507 2114857 -251141726 + MLT1A1 LTR MaLR 1 352 -13 19047 167 30 15 chr2 2114993 2115370 -251141213 - L1 LINE L1 -3789 3776 3406 189 94 0 0 chr2 2115370 2115402 -251141181 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 19047 167 30 15 chr2 2115402 2116418 -251140165 - L1 LINE L1 -4159 3406 2407 2033 116 25 3 chr2 2116418 2116702 -251139881 + AluSq SINE Alu 1 290 -23 19047 167 30 15 chr2 2116702 2118210 -251138373 - L1 LINE L1 -5158 2407 804 1533 127 19 0 chr2 2118210 2118423 -251138160 + AluSp SINE Alu 89 305 -8 19047 167 30 15 chr2 2118423 2119228 -251137355 - L1 LINE L1 -6761 804 13 673 334 59 100 chr2 2119229 2120038 -251136545 + L1ME3A LINE L1 5394 6169 -1 1107 304 127 22 chr2 2120325 2121111 -251135472 - L2 LINE L2 -665 2649 1781 211 213 21 0 chr2 2121138 2121185 -251135398 + L2 LINE L2 3266 3313 0 1239 175 0 0 chr2 2121880 2122086 -251134497 - AluJb SINE Alu -1 311 106 719 317 98 31 chr2 2122096 2122511 -251134072 + L1ME LINE L1 3369 3808 -2338 37 81 0 0 chr2 2122518 2122604 -251133979 + AT_rich Low_complexity Low_complexity 1 86 0 404 212 16 43 chr2 2122782 2122966 -251133617 + (TA)n Simple_repeat Simple_repeat 2 180 0 1684 270 97 46 chr2 2123061 2123574 -251133009 + L1ME LINE L1 3948 4433 -1713 2255 111 45 31 chr2 2123574 2123933 -251132650 - THE1B LTR MaLR 0 364 1 1684 270 97 46 chr2 2123933 2124780 -251131803 + L1ME LINE L1 4433 5378 -768 424 269 0 17 chr2 2125194 2125313 -251131270 + L1ME LINE L1 5643 5759 -411 824 257 117 18 chr2 2125534 2125876 -251130707 + L1ME LINE L1 5410 5785 -385 308 206 118 20 chr2 2126205 2126307 -251130276 - HAL1 LINE L1 -1423 1084 973 1361 31 12 0 chr2 2126891 2127053 -251129530 + L1PA5 LINE L1 5984 6147 -7 234 62 0 0 chr2 2127656 2127688 -251128895 + (TG)n Simple_repeat Simple_repeat 1 32 0 183 42 0 0 chr2 2127935 2127959 -251128624 + (TTTTTA)n Simple_repeat Simple_repeat 4 27 0 2136 118 0 17 chr2 2128310 2128671 -251127912 + AluSx SINE Alu 1 356 0 1414 214 67 38 chr2 2128805 2129254 -251127329 - MLT1C LTR MaLR -2 465 4 193 320 13 27 chr2 2129859 2129934 -251126649 - L2 LINE L2 -6 3307 3234 392 322 107 53 chr2 2130334 2131027 -251125556 - L1M4 LINE L1 -3218 2928 2199 3859 189 23 51 chr2 2131731 2132604 -251123979 + L1MA9 LINE L1 4940 5771 -541 270 0 0 0 chr2 2132604 2132634 -251123949 + (CA)n Simple_repeat Simple_repeat 1 30 0 3859 189 23 51 chr2 2132634 2133125 -251123458 + L1MA9 LINE L1 5771 6274 -38 328 289 62 57 chr2 2133499 2133869 -251122714 + LTR16A LTR ERVL 74 445 -5 545 320 42 14 chr2 2133875 2134159 -251122424 + HERV16 LTR ERVL 2 293 -4703 875 212 45 37 chr2 2134294 2134563 -251122020 - MLT1D LTR MaLR 0 505 235 502 324 52 0 chr2 2134730 2134943 -251121640 + HERV16 LTR ERVL 457 680 -4316 1532 312 64 18 chr2 2135047 2136318 -251120265 + HERV16 LTR ERVL 869 2293 -3072 396 0 0 0 chr2 2136318 2136362 -251120221 + (TA)n Simple_repeat Simple_repeat 2 45 0 1532 312 64 18 chr2 2136362 2136537 -251120046 + HERV16 LTR ERVL 2293 2458 -2907 566 142 9 9 chr2 2136637 2136743 -251119840 - MSTC LTR MaLR 0 428 323 12046 107 5 1 chr2 2136852 2138632 -251117951 - L1P3 LINE L1 -4676 1775 7 321 152 61 15 chr2 2138632 2138698 -251117885 - MSTB2 LTR MaLR -388 69 1 4025 210 50 1 chr2 2139790 2140770 -251115813 + L1MCa LINE L1 139 1166 -5260 3419 221 24 46 chr2 2140773 2141352 -251115231 + L1MB8 LINE L1 4599 5189 -989 306 24 0 0 chr2 2141352 2141393 -251115190 + L1PA4 LINE L1 6112 6152 -3 3419 221 24 46 chr2 2141393 2142330 -251114253 + L1MB8 LINE L1 5189 6011 -167 2210 78 0 0 chr2 2142330 2142598 -251113985 + AluY SINE Alu 29 296 -15 3419 221 24 46 chr2 2142598 2142748 -251113835 + L1MB8 LINE L1 6011 6163 -15 301 281 97 52 chr2 2143538 2143805 -251112778 - L2 LINE L2 -13 3300 3022 28 0 0 0 chr2 2144569 2144597 -251111986 + AT_rich Low_complexity Low_complexity 1 28 0 4778 0 81 0 chr2 2145686 2145929 -251110654 + L1MC2 LINE L1 5106 5325 -1019 4778 131 46 7 chr2 2145929 2146771 -251109812 + L1MC2 LINE L1 5461 6335 -9 4778 0 81 0 chr2 2146771 2146806 -251109777 + L1MC2 LINE L1 5325 6335 -9 343 278 120 1 chr2 2148450 2148609 -251107974 + HERV16 LTR ERVL 2972 3129 -2525 877 325 64 51 chr2 2149132 2150050 -251106533 + ERVL LTR ERVL 4474 5403 -361 253 284 0 0 chr2 2150056 2150130 -251106453 + L1MC4 LINE L1 6628 6701 -1341 252 271 38 128 chr2 2151114 2151247 -251105336 + L2 LINE L2 3150 3270 -2 213 305 118 37 chr2 2151244 2151431 -251105152 + L2 LINE L2 2183 2384 -930 * 279 321 81 48 chr2 2151904 2152379 -251104204 + L2 LINE L2 2593 3084 -188 271 313 45 36 chr2 2153742 2153854 -251102729 - L2 LINE L2 -19 3253 3141 302 308 0 0 chr2 2154118 2154222 -251102361 + (CA)n Simple_repeat Simple_repeat 1 104 0 196 324 28 19 chr2 2154655 2154763 -251101820 - L2 LINE L2 -1 3312 3204 254 339 84 46 chr2 2154883 2155506 -251101077 - L2 LINE L2 -185 3087 2444 388 292 41 19 chr2 2155511 2155762 -251100821 + L1ME4a LINE L1 5329 5582 -580 243 258 34 45 chr2 2156025 2156114 -251100469 + L2 LINE L2 3172 3259 -54 198 71 0 0 chr2 2156132 2156160 -251100423 + (TGAA)n Simple_repeat Simple_repeat 2 29 0 188 358 83 46 chr2 2157045 2157154 -251099429 - L2 LINE L2 -18 3254 3142 2419 116 28 0 chr2 2157397 2157751 -251098832 + THE1B LTR MaLR 1 364 0 271 293 123 0 chr2 2159949 2160055 -251096528 + L2 LINE L2 3185 3303 -10 1335 162 33 114 chr2 2160418 2160752 -251095831 - AluYb8 SINE Alu -9 309 3 725 178 7 0 chr2 2162606 2162741 -251093842 + L1PB4 LINE L1 6013 6148 -8 3202 257 81 36 chr2 2162785 2163351 -251093232 - L1ME LINE L1 -458 5642 5103 2255 127 0 0 chr2 2163351 2163659 -251092924 - AluSg SINE Alu -2 308 1 3202 257 81 36 chr2 2163659 2165383 -251091200 - L1ME LINE L1 -997 5103 3237 266 214 0 0 chr2 2165579 2165635 -251090948 - MER58 DNA MER1_type -100 115 60 546 261 67 78 chr2 2165750 2166121 -251090462 - L1ME LINE L1 -4202 2059 1693 26 98 0 0 chr2 2166126 2166208 -251090375 + AT_rich Low_complexity Low_complexity 1 82 0 934 289 82 50 chr2 2166299 2167436 -251089147 - L1ME LINE L1 -4649 1433 378 228 135 0 0 chr2 2167706 2167743 -251088840 + (T)n Simple_repeat Simple_repeat 1 37 0 350 324 7 35 chr2 2168302 2168444 -251088139 - MER5A DNA MER1_type -22 167 30 300 337 141 9 chr2 2168510 2168851 -251087732 + L1ME4a LINE L1 5606 5991 -130 288 247 74 0 chr2 2169940 2170021 -251086562 - L2 LINE L2 -7 3306 3220 333 0 0 0 chr2 2171187 2171224 -251085359 + (TG)n Simple_repeat Simple_repeat 1 37 0 2194 114 0 7 chr2 2171872 2172178 -251084405 - AluSx SINE Alu -8 304 1 934 281 70 24 chr2 2172612 2173071 -251083512 - L1ME3A LINE L1 -5 6165 5686 987 293 100 21 chr2 2173083 2174108 -251082475 - L1ME3A LINE L1 -595 5575 4632 2140 120 0 10 chr2 2174108 2174120 -251082463 - AluSx SINE Alu -14 298 287 229 67 0 0 chr2 2174120 2174150 -251082433 + (TTTA)n Simple_repeat Simple_repeat 2 144 0 2140 120 0 10 chr2 2174150 2174438 -251082145 - AluSx SINE Alu -25 287 1 3222 165 16 40 chr2 2174447 2175113 -251081470 - L1MA8 LINE L1 -17 6274 5625 987 293 100 21 chr2 2175113 2175251 -251081332 - L1ME3A LINE L1 -1545 4625 4316 782 134 9 0 chr2 2176257 2176369 -251080214 - THE1B LTR MaLR -188 176 64 2640 107 3 0 chr2 2177211 2177574 -251079009 - THE1B LTR MaLR 0 364 1 197 286 29 14 chr2 2178475 2178545 -251078038 + MIR SINE MIR 21 91 -117 232 325 70 38 chr2 2178799 2178956 -251077627 + MIR SINE MIR 82 243 -19 324 264 8 32 chr2 2179088 2179213 -251077370 + (TATATG)n Simple_repeat Simple_repeat 4 125 0 1292 200 50 126 chr2 2179573 2179834 -251076749 + MLT2B1 LTR ERVL 1 280 -134 239 0 0 31 chr2 2179834 2179866 -251076717 + (TTTTC)n Simple_repeat Simple_repeat 2 32 0 1292 200 50 126 chr2 2179866 2179957 -251076626 + MLT2B1 LTR ERVL 280 192 -222 518 15 0 29 chr2 2179957 2180025 -251076558 + (TTTTC)n Simple_repeat Simple_repeat 2 67 0 1292 200 50 126 chr2 2180025 2180230 -251076353 + MLT2B1 LTR ERVL 191 410 -4 23 0 0 29 chr2 2180697 2180717 -251075866 + AT_rich Low_complexity Low_complexity 1 21 -12 1768 155 0 0 chr2 2180717 2181001 -251075582 - AluSg SINE Alu -26 284 1 23 0 0 29 chr2 2181001 2181014 -251075569 + AT_rich Low_complexity Low_complexity 21 33 0 207 69 0 0 chr2 2181845 2181874 -251074709 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 259 367 33 39 chr2 2182558 2182738 -251073845 - L2 LINE L2 0 3272 3094 2229 132 21 34 chr2 2184441 2184821 -251071762 + THE1C LTR MaLR 1 375 0 444 243 33 72 chr2 2184891 2184997 -251071586 - MLT1C LTR MaLR 0 467 358 2500 111 8 3 chr2 2184997 2185350 -251071233 - THE1A LTR MaLR 0 355 1 11399 106 9 5 chr2 2185350 2186924 -251069659 - THE1A-int LTR MaLR 0 1580 1 2580 94 8 3 chr2 2186926 2187277 -251069306 - THE1A LTR MaLR -2 353 1 444 243 33 72 chr2 2187277 2187318 -251069265 - MLT1C LTR MaLR -109 358 322 * 591 162 19 8 chr2 2187313 2187434 -251069149 - MLT1C LTR MaLR -252 138 16 427 213 44 46 chr2 2187608 2187747 -251068836 + L1ME3 LINE L1 6028 6162 0 202 351 57 53 chr2 2187962 2188227 -251068356 - L2 LINE L2 -1 3271 3006 483 221 0 0 chr2 2188313 2188440 -251068143 + (TG)n Simple_repeat Simple_repeat 2 128 0 204 217 67 33 chr2 2189782 2189842 -251066741 - MIR SINE MIR -78 184 123 2305 92 0 0 chr2 2191281 2191586 -251064997 - AluY SINE Alu -6 305 1 2348 113 158 0 chr2 2192850 2193281 -251063302 - LTR19A LTR ERV1 -4 482 1 224 209 75 45 chr2 2195125 2195192 -251061391 - L3 LINE CR1 -123 1454 1386 * 509 286 91 0 chr2 2195180 2195355 -251061228 + MIR SINE MIR 72 262 0 243 237 21 72 chr2 2195385 2195482 -251061101 - L3 LINE CR1 -205 1372 1281 2372 208 19 21 chr2 2195602 2196070 -251060513 - MLT2B1 LTR ERVL -2 518 52 1994 173 59 50 chr2 2196070 2196491 -251060092 - MSTB1 LTR MaLR -2 430 6 255 146 0 0 chr2 2196487 2196528 -251060055 - MLT2B1 LTR ERVL -461 59 19 * 220 312 117 85 chr2 2196533 2196969 -251059614 + L2 LINE L2 1563 2012 -1302 573 252 15 7 chr2 2197023 2197158 -251059425 - MLT1B LTR MaLR 0 390 255 587 322 150 38 chr2 2197619 2198012 -251058571 - L2 LINE L2 -444 2870 2522 1342 243 32 42 chr2 2198012 2198412 -251058171 + MSTD LTR MaLR 1 396 0 587 322 150 38 chr2 2198412 2199062 -251057521 - L2 LINE L2 -792 2522 1710 478 300 19 6 chr2 2199200 2199360 -251057223 + LTR16A LTR ERVL 105 266 -184 180 356 17 69 chr2 2200301 2200475 -251056108 + L2 LINE L2 3149 3313 0 1921 99 11 0 chr2 2201658 2201921 -251054662 - AluSx SINE Alu -5 307 42 201 243 0 0 chr2 2202092 2202129 -251054454 + MIR3 SINE MIR 120 156 -52 254 265 166 13 chr2 2203451 2203556 -251053027 - MIR SINE MIR -46 162 46 182 318 12 24 chr2 2204664 2204749 -251051834 + MIR SINE MIR 63 146 -116 214 282 130 92 chr2 2205439 2205570 -251051013 + MIR SINE MIR 53 188 -74 293 284 23 23 chr2 2206633 2206721 -251049862 + MER5A DNA MER1_type 22 109 -80 225 228 51 165 chr2 2207664 2207822 -251048761 + MIR SINE MIR 80 219 -43 201 196 0 0 chr2 2208099 2208145 -251048438 + (TCCA)n Simple_repeat Simple_repeat 1 46 0 473 250 0 12 chr2 2208198 2208366 -251048217 + (TCCA)n Simple_repeat Simple_repeat 2 167 0 662 211 6 0 chr2 2208397 2208572 -251048011 + (TCCA)n Simple_repeat Simple_repeat 3 178 0 610 248 8 0 chr2 2208621 2208890 -251047693 + (TCCA)n Simple_repeat Simple_repeat 1 271 0 314 304 26 26 chr2 2208960 2209075 -251047508 + MIR3 SINE MIR 94 208 0 462 271 65 7 chr2 2209317 2209472 -251047111 - MIR SINE MIR -60 202 39 23 33 0 0 chr2 2209943 2209973 -251046610 + AT_rich Low_complexity Low_complexity 1 30 0 203 185 0 19 chr2 2210097 2210151 -251046432 + (CA)n Simple_repeat Simple_repeat 1 53 0 270 160 0 0 chr2 2210607 2210657 -251045926 + (CA)n Simple_repeat Simple_repeat 1 50 0 315 312 75 45 chr2 2212941 2213249 -251043334 + L2 LINE L2 1891 2207 -1107 293 358 8 8 chr2 2213569 2213692 -251042891 - MIR SINE MIR -67 141 19 1257 157 138 46 chr2 2217579 2217840 -251038743 - AluJb SINE Alu -25 287 3 2566 111 6 3 chr2 2218299 2218661 -251037922 + THE1B LTR MaLR 2 364 0 229 237 37 89 chr2 2218951 2219086 -251037497 + L1ME LINE L1 5618 5745 -376 358 311 94 32 chr2 2219346 2219623 -251036960 - L1ME LINE L1 -345 5776 5483 2484 242 41 28 chr2 2219737 2220443 -251036140 - L1ME1 LINE L1 -4 6162 5448 1957 123 3 3 chr2 2221019 2221328 -251035255 - AluSx SINE Alu 0 309 1 260 327 109 25 chr2 2222455 2222657 -251033926 - L3 LINE CR1 -348 1229 1011 192 40 0 0 chr2 2223251 2223276 -251033307 + (TCTG)n Simple_repeat Simple_repeat 3 27 0 180 0 0 0 chr2 2223299 2223319 -251033264 + (TCTG)n Simple_repeat Simple_repeat 4 23 0 216 0 0 0 chr2 2223413 2223437 -251033146 + (TCTG)n Simple_repeat Simple_repeat 4 27 0 458 296 24 18 chr2 2224208 2224377 -251032206 + MER5A DNA MER1_type 8 177 -12 303 307 16 16 chr2 2225038 2225165 -251031418 + MER94 DNA DNA 1 127 -7 202 274 0 20 chr2 2226729 2226780 -251029803 + GA-rich Low_complexity Low_complexity 2 51 0 459 287 39 60 chr2 2228258 2228540 -251028043 - MLT1J LTR MaLR -235 276 1 188 267 50 0 chr2 2228796 2228856 -251027727 + MIR SINE MIR 53 115 -147 233 146 0 0 chr2 2229151 2229192 -251027391 - MSTB LTR MaLR 0 426 386 2097 76 8 0 chr2 2229194 2229457 -251027126 + AluSq SINE Alu 33 297 -16 321 305 195 0 chr2 2230313 2230431 -251026152 - MER5A DNA MER1_type -3 186 46 678 246 66 6 chr2 2230455 2230638 -251025945 + MER58C DNA MER1_type 21 214 -1 2344 97 3 0 chr2 2230769 2230892 -251025691 + AluSp SINE Alu 1 122 -191 577 0 27 0 chr2 2230892 2230965 -251025618 + (TAAAA)n Simple_repeat Simple_repeat 2 76 0 2344 97 3 0 chr2 2230965 2231140 -251025443 + AluSp SINE Alu 122 300 -13 271 183 29 19 chr2 2231243 2231347 -251025236 + (TAGA)n Simple_repeat Simple_repeat 1 105 0 221 94 47 47 chr2 2231417 2231481 -251025102 + (TAGA)n Simple_repeat Simple_repeat 1 64 0 1099 264 72 14 chr2 2231516 2231932 -251024651 - MER92C LTR ERV1 -8 546 107 289 296 173 37 chr2 2233607 2233769 -251022814 + MER5A DNA MER1_type 4 187 -2 180 274 65 48 chr2 2234471 2234533 -251022050 + MIR3 SINE MIR 107 169 -39 181 256 0 23 chr2 2234871 2234914 -251021669 + L2 LINE L2 3263 3304 -9 1429 178 71 32 chr2 2235101 2235480 -251021103 - Tigger2 DNA MER2_type 0 2718 4 2185 152 33 31 chr2 2235532 2236081 -251020502 - MLT2A2 LTR ERVL 0 554 1 249 98 0 0 chr2 2236471 2236512 -251020071 + (GCTG)n Simple_repeat Simple_repeat 4 44 0 323 319 17 9 chr2 2236575 2236691 -251019892 + MIR SINE MIR 82 198 -64 183 156 0 0 chr2 2237951 2237983 -251018600 + (ATGGTG)n Simple_repeat Simple_repeat 6 37 0 2068 116 141 0 chr2 2238163 2238533 -251018050 - MSTA LTR MaLR 0 428 7 8623 170 37 8 chr2 2238539 2240129 -251016454 - MSTA-int LTR MaLR -14 1637 1 2200 158 94 5 chr2 2240129 2240522 -251016061 - MSTA LTR MaLR 0 428 1 317 333 52 82 chr2 2240522 2240789 -251015794 - L1MEd LINE L1 -4097 2213 1955 5858 138 1 2 chr2 2240799 2241933 -251014650 + L1PA13 LINE L1 5024 6163 0 522 306 113 63 chr2 2242080 2242808 -251013775 - L1MEd LINE L1 -795 1695 928 37 62 0 0 chr2 2242808 2242873 -251013710 + AT_rich Low_complexity Low_complexity 1 65 0 1001 171 57 5 chr2 2242888 2243036 -251013547 - L1MA9 LINE L1 0 6312 6148 294 29 0 0 chr2 2243036 2243071 -251013512 + (TG)n Simple_repeat Simple_repeat 2 36 0 1001 171 57 5 chr2 2243071 2243132 -251013451 - L1MA9 LINE L1 -164 6148 6092 657 209 36 0 chr2 2243142 2243281 -251013302 - FRAM SINE Alu -32 144 1 2306 167 48 74 chr2 2243282 2243842 -251012741 - L1MA9 LINE L1 -201 6111 5567 306 301 195 16 chr2 2243847 2244093 -251012490 - L1MEd LINE L1 -5233 886 597 664 266 112 33 chr2 2245209 2245370 -251011213 - MLT1C LTR MaLR 0 467 320 1260 225 63 42 chr2 2245370 2245748 -251010835 + MLT1B LTR MaLR 5 390 0 664 266 112 33 chr2 2245748 2245991 -251010592 - MLT1C LTR MaLR -147 320 22 203 337 20 41 chr2 2246215 2246313 -251010270 + MIR3 SINE MIR 105 200 -8 193 290 32 32 chr2 2246541 2246603 -251009980 + L2 LINE L2 3232 3293 -20 641 261 78 78 chr2 2247672 2248055 -251008528 + MLT1C LTR MaLR 1 383 -84 325 336 38 0 chr2 2248316 2248447 -251008136 + MIR SINE MIR 118 253 -9 185 324 29 10 chr2 2248563 2248665 -251007918 - MIR SINE MIR -131 131 28 2247 110 10 10 chr2 2248973 2249283 -251007300 - AluSp SINE Alu -3 310 1 227 260 0 60 chr2 2249887 2249987 -251006596 + (CAGG)n Simple_repeat Simple_repeat 3 96 0 354 281 0 62 chr2 2250007 2250185 -251006398 + (CAGG)n Simple_repeat Simple_repeat 2 168 0 441 182 13 7 chr2 2251603 2251757 -251004826 + (CA)n Simple_repeat Simple_repeat 1 155 0 1052 247 115 20 chr2 2251788 2252144 -251004439 + MLT1B LTR MaLR 1 390 0 206 242 15 30 chr2 2253121 2253187 -251003396 + MIR SINE MIR 86 150 -58 197 208 0 130 chr2 2253188 2253265 -251003318 + MER5A DNA MER1_type 33 99 -90 296 333 199 20 chr2 2254721 2255124 -251001459 - L2 LINE L2 -13 3300 2826 252 258 32 11 chr2 2258303 2258396 -250998187 + C-rich Low_complexity Low_complexity 5 99 0 464 79 87 24 chr2 2258927 2259421 -250997162 + (CA)n Simple_repeat Simple_repeat 1 524 0 386 186 48 9 chr2 2259445 2259913 -250996670 + (CA)n Simple_repeat Simple_repeat 1 486 0 253 197 45 0 chr2 2259927 2259993 -250996590 + (CA)n Simple_repeat Simple_repeat 2 70 0 416 143 65 0 chr2 2260012 2260166 -250996417 + (CA)n Simple_repeat Simple_repeat 1 164 0 426 148 63 56 chr2 2260208 2260825 -250995758 + (ATGGTG)n Simple_repeat Simple_repeat 1 621 0 318 185 0 0 chr2 2262047 2262101 -250994482 - MER63 DNA MER1_type -24 1036 983 * 522 175 167 0 chr2 2262099 2262213 -250994370 - MER63 DNA MER1_type -302 760 2 240 281 89 44 chr2 2262820 2262955 -250993628 + L2 LINE L2 3132 3272 0 267 140 0 0 chr2 2263099 2263149 -250993434 + (GGGGA)n Simple_repeat Simple_repeat 2 51 0 261 0 0 0 chr2 2263398 2263427 -250993156 + (CA)n Simple_repeat Simple_repeat 2 30 0 21 36 0 0 chr2 2264613 2264641 -250991942 + AT_rich Low_complexity Low_complexity 1 28 0 222 347 0 0 chr2 2264650 2264722 -250991861 + (CATATA)n Simple_repeat Simple_repeat 6 77 0 697 248 72 33 chr2 2264892 2265199 -250991384 + L1MD2 LINE L1 4965 5283 -863 * 968 285 94 79 chr2 2265197 2265591 -250990992 + L1MD2 LINE L1 5560 5946 -413 2535 87 0 3 chr2 2265591 2265902 -250990681 - AluSx SINE Alu -2 310 1 968 285 94 79 chr2 2265902 2266282 -250990301 + L1MD2 LINE L1 5946 6346 -13 297 255 131 41 chr2 2268573 2268718 -250987865 - MER5B DNA MER1_type -18 160 3 263 259 108 86 chr2 2268740 2268879 -250987704 - MIR SINE MIR -112 150 9 1693 160 10 7 chr2 2269852 2270145 -250986438 + MER49 LTR ERV1 1 294 -629 6660 91 11 0 chr2 2270204 2271314 -250985269 + L1PA10 LINE L1 5046 6164 -4 1373 204 36 24 chr2 2271327 2271660 -250984923 + MER4D LTR ERV1 567 903 0 187 28 56 28 chr2 2272878 2272914 -250983669 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 281 290 133 10 chr2 2273118 2273241 -250983342 - MER5A DNA MER1_type -10 179 27 218 311 125 25 chr2 2273277 2273502 -250983081 + MIR SINE MIR 8 262 0 237 33 0 0 chr2 2273827 2273857 -250982726 + (TG)n Simple_repeat Simple_repeat 2 31 0 1737 181 0 7 chr2 2274079 2274383 -250982200 + AluJb SINE Alu 1 302 -10 230 71 0 0 chr2 2275237 2275265 -250981318 + LTR47A LTR ERVL 4 31 -421 1980 161 130 3 chr2 2275265 2275649 -250980934 + LTR47A LTR ERVL 4 436 -16 18749 168 60 13 chr2 2276957 2280737 -250975846 + L1M1 LINE L1 19 3619 -4105 1011 23 0 38 chr2 2280737 2280868 -250975715 - L1PA6 LINE L1 -7 6147 6022 18749 168 60 13 chr2 2280868 2281794 -250974789 + L1M1 LINE L1 3619 4500 -3224 2171 118 3 0 chr2 2281794 2282100 -250974483 + AluSq SINE Alu 1 307 -6 18749 168 60 13 chr2 2282100 2284047 -250972536 + L1M1 LINE L1 4500 6983 -741 445 241 19 86 chr2 2284070 2284177 -250972406 + MLT1F1 LTR MaLR 407 502 -65 2206 92 0 0 chr2 2284177 2284486 -250972097 - AluSg SINE Alu 0 309 1 445 241 19 86 chr2 2284486 2284539 -250972044 + MLT1F1 LTR MaLR 502 557 -10 353 275 84 41 chr2 2284562 2284783 -250971800 + MIR SINE MIR 20 249 -13 452 335 180 12 chr2 2285413 2285735 -250970848 + L3 LINE CR1 1114 1489 -88 297 310 90 21 chr2 2287379 2287524 -250969059 - MIR SINE MIR -52 210 56 665 256 61 22 chr2 2287557 2287737 -250968846 - MER5A DNA MER1_type -2 187 1 228 86 0 0 chr2 2288279 2288314 -250968269 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1783 195 14 24 chr2 2289152 2289522 -250967061 - MER47A DNA MER2_type 0 366 1 1492 151 3 56 chr2 2289529 2289661 -250966922 + MER2 DNA MER2_type 2 113 -232 1320 199 34 21 chr2 2289661 2289952 -250966631 - AluJb SINE Alu -17 295 1 1492 151 3 56 chr2 2289952 2290103 -250966480 + MER2 DNA MER2_type 113 270 -75 641 327 154 34 chr2 2290218 2291319 -250965264 + L2 LINE L2 1744 2977 -337 378 0 0 0 chr2 2292800 2292842 -250963741 + (CA)n Simple_repeat Simple_repeat 1 42 0 1633 213 20 20 chr2 2292843 2293190 -250963393 + MER7A DNA MER2_type 2 346 0 2429 150 33 17 chr2 2294926 2295345 -250961238 + MSTA LTR MaLR 1 426 -2 410 293 61 50 chr2 2296066 2296162 -250960421 - MIR SINE MIR -19 243 149 2266 84 3 0 chr2 2296162 2296459 -250960124 - AluSp SINE Alu -14 299 2 410 293 61 50 chr2 2296459 2296560 -250960023 - MIR SINE MIR -113 149 44 641 311 48 32 chr2 2297987 2298235 -250958348 + MIR SINE MIR 8 259 -3 391 204 23 11 chr2 2298235 2298323 -250958260 + MLT1A1 LTR MaLR 1 89 -276 269 200 9 29 chr2 2298536 2298641 -250957942 + (TG)n Simple_repeat Simple_repeat 2 104 0 344 242 7 39 chr2 2298666 2299089 -250957494 + (TG)n Simple_repeat Simple_repeat 1 409 0 311 281 149 9 chr2 2300854 2301075 -250955508 + L1ME LINE L1 5097 5348 -798 249 310 120 37 chr2 2301081 2301381 -250955202 + L1ME LINE L1 5368 5692 -429 633 316 24 14 chr2 2301437 2301649 -250954934 - L2 LINE L2 0 3313 3100 237 189 117 99 chr2 2301824 2301935 -250954648 + L1ME4a LINE L1 5973 6085 -36 18364 62 10 17 chr2 2306964 2309286 -250947297 + HERVL LTR ERVL 3105 5410 -244 1604 162 184 11 chr2 2311211 2311576 -250945007 - MSTA LTR MaLR 0 428 1 8332 157 26 51 chr2 2311576 2313195 -250943388 - MSTA-int LTR MaLR 0 1580 3 2093 139 126 23 chr2 2313197 2313585 -250942998 - MSTA LTR MaLR 0 428 1 707 261 123 22 chr2 2314114 2314527 -250942056 + MLT1C LTR MaLR 1 455 -12 392 267 18 0 chr2 2314667 2315132 -250941451 + (CA)n Simple_repeat Simple_repeat 1 473 0 233 274 171 17 chr2 2315563 2315680 -250940903 - MIR SINE MIR -5 257 123 201 312 17 0 chr2 2316424 2316517 -250940066 - MIR SINE MIR -56 152 58 401 313 72 6 chr2 2316919 2317085 -250939498 - MIR SINE MIR -33 229 53 3475 216 71 25 chr2 2317415 2318400 -250938183 + L1MC3 LINE L1 6748 7777 -8 2205 104 139 11 chr2 2318522 2318897 -250937686 + MSTA LTR MaLR 6 428 0 794 50 0 0 chr2 2320420 2320521 -250936062 + HERVL-A1 LTR ERVL 5554 5654 0 2722 106 20 40 chr2 2320522 2320974 -250935609 + MLT2A1 LTR ERVL 2 444 0 1758 135 46 0 chr2 2322085 2322367 -250934216 + AluSq SINE Alu 1 295 -18 1030 303 157 35 chr2 2323133 2323994 -250932589 - L2 LINE L2 -1627 1687 722 351 269 23 110 chr2 2324038 2324302 -250932281 - L2 LINE L2 -2764 550 310 2292 74 0 7 chr2 2325954 2326237 -250930346 - AluY SINE Alu -10 301 21 196 337 11 11 chr2 2326512 2326601 -250929982 - L3 LINE CR1 -144 1433 1345 416 298 51 28 chr2 2327143 2327321 -250929262 + MIR SINE MIR 61 242 -20 249 217 16 71 chr2 2328141 2328325 -250928258 + (CA)n Simple_repeat Simple_repeat 1 174 0 392 199 11 72 chr2 2328725 2328906 -250927677 + (CA)n Simple_repeat Simple_repeat 1 170 0 433 274 17 23 chr2 2328944 2329119 -250927464 + (CA)n Simple_repeat Simple_repeat 2 175 0 2263 121 0 3 chr2 2330754 2331060 -250925523 - AluSx SINE Alu -7 305 1 283 258 75 21 chr2 2331762 2331855 -250924728 + MIR SINE MIR 103 200 -62 260 310 34 54 chr2 2335131 2335428 -250921155 - L2 LINE L2 -78 3235 2945 2334 78 29 13 chr2 2335436 2335742 -250920841 + AluY SINE Alu 1 311 0 358 326 228 12 chr2 2335763 2336328 -250920255 - L2 LINE L2 -911 2403 1717 796 262 5 0 chr2 2336832 2337023 -250919560 + MLT1A1 LTR MaLR 172 363 -2 8427 178 30 46 chr2 2337110 2340129 -250916454 + L1MA8 LINE L1 3319 6286 -5 27 0 0 0 chr2 2340130 2340157 -250916426 + AT_rich Low_complexity Low_complexity 1 27 0 290 228 40 40 chr2 2341211 2341312 -250915271 - MER45 DNA AcHobo -898 142 42 625 169 23 31 chr2 2342133 2342197 -250914386 + MER45A DNA AcHobo 42 105 -1476 2262 115 0 3 chr2 2342197 2342493 -250914090 - AluSq SINE Alu -18 295 1 625 169 23 31 chr2 2342493 2342558 -250914025 + MER45A DNA AcHobo 105 170 -8 233 338 15 0 chr2 2342578 2342646 -250913937 + MIR3 SINE MIR 103 171 -37 287 193 102 45 chr2 2342940 2343028 -250913555 + MIR SINE MIR 108 200 -62 2647 68 0 0 chr2 2343090 2343399 -250913184 - AluY SINE Alu -1 310 2 759 333 36 45 chr2 2343497 2344303 -250912280 + L1MEc LINE L1 388 1186 -5377 3892 181 74 9 chr2 2344304 2345258 -250911325 + L1MB3 LINE L1 5165 6182 -1 423 184 34 54 chr2 2345265 2345412 -250911171 + L1MEc LINE L1 1178 1321 -5242 317 333 78 29 chr2 2345442 2345646 -250910937 + L1MEc LINE L1 1277 1490 -4894 333 283 87 46 chr2 2345929 2346148 -250910435 + L1ME LINE L1 5558 5785 -336 1715 175 0 31 chr2 2346204 2346539 -250910044 - AluJb SINE Alu 0 326 1 207 0 0 0 chr2 2347117 2347140 -250909443 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 21 82 0 0 chr2 2347807 2347856 -250908727 + AT_rich Low_complexity Low_complexity 1 49 0 2621 257 26 57 chr2 2348036 2348103 -250908480 - MER63C DNA MER1_type -138 922 854 2149 125 7 3 chr2 2348103 2348400 -250908183 - AluSq SINE Alu -15 298 1 2621 257 26 57 chr2 2348400 2349055 -250907528 - MER63C DNA MER1_type -206 854 233 710 208 19 19 chr2 2349055 2349214 -250907369 - L1MC1 LINE L1 0 6333 6175 2621 257 26 57 chr2 2349214 2349437 -250907146 - MER63C DNA MER1_type -827 233 5 294 73 0 0 chr2 2349659 2349700 -250906883 + (TTGG)n Simple_repeat Simple_repeat 2 42 0 219 286 52 45 chr2 2349759 2349913 -250906670 + L2 LINE L2 2898 3052 -220 1698 264 146 26 chr2 2350552 2350880 -250905703 - L1ME3A LINE L1 -1 6169 5882 4277 101 28 2 chr2 2350880 2351523 -250905060 - MER4A LTR ERV1 -2 662 3 1698 264 146 26 chr2 2351523 2352047 -250904536 - L1ME3A LINE L1 -288 5882 5187 302 313 76 8 chr2 2352164 2352295 -250904288 - MIR SINE MIR -91 171 32 256 289 19 48 chr2 2352614 2352718 -250903865 - L2 LINE L2 -95 3218 3118 200 258 17 146 chr2 2352750 2352928 -250903655 - L2 LINE L2 -201 3071 2917 409 261 112 63 chr2 2352992 2353465 -250903118 + MLT1H LTR MaLR 4 540 -9 351 113 0 0 chr2 2353557 2353610 -250902973 + (T)n Simple_repeat Simple_repeat 1 53 0 205 324 0 0 chr2 2353927 2354001 -250902582 + (CCCA)n Simple_repeat Simple_repeat 2 75 0 1482 326 163 17 chr2 2354001 2355263 -250901320 + L2 LINE L2 1478 2923 -391 2647 71 0 0 chr2 2355263 2355573 -250901010 + AluY SINE Alu 1 310 -1 209 269 171 23 chr2 2356795 2356970 -250899613 + L2 LINE L2 3113 3313 0 241 267 58 12 chr2 2358296 2358382 -250898201 - MIR SINE MIR -68 140 51 267 143 0 0 chr2 2358522 2358564 -250898019 - 5S rRNA rRNA -79 42 1 410 177 13 0 chr2 2358828 2358907 -250897676 + MADE1 DNA Mariner 1 80 0 192 125 0 0 chr2 2359041 2359073 -250897510 + (TTTTC)n Simple_repeat Simple_repeat 4 35 0 231 173 0 0 chr2 2359236 2359288 -250897295 + (CA)n Simple_repeat Simple_repeat 1 52 0 227 143 41 0 chr2 2359418 2359467 -250897116 + A-rich Low_complexity Low_complexity 2 52 0 191 234 64 0 chr2 2361562 2361609 -250894974 - L2 LINE L2 -11 3302 3253 1617 182 23 28 chr2 2361658 2362010 -250894573 - L1MB2 LINE L1 0 6171 5822 355 194 0 0 chr2 2362017 2362089 -250894494 - L1MB2 LINE L1 -666 5517 5446 219 358 0 0 chr2 2362923 2363004 -250893579 + MIR SINE MIR 56 136 -72 23 0 0 0 chr2 2363760 2363783 -250892800 + AT_rich Low_complexity Low_complexity 1 23 0 267 342 43 0 chr2 2367550 2367667 -250888916 - MIR SINE MIR -108 154 33 2314 114 0 0 chr2 2367930 2368229 -250888354 - AluSg SINE Alu -11 299 1 421 208 37 34 chr2 2368428 2368750 -250887833 + (TG)n Simple_repeat Simple_repeat 1 323 0 1009 282 59 9 chr2 2368982 2369404 -250887179 - L1MB2 LINE L1 -1213 4933 4491 900 321 23 19 chr2 2369423 2369900 -250886683 - L1MB2 LINE L1 -2318 3828 3350 1049 269 117 37 chr2 2370062 2370549 -250886034 - LTR41 LTR ERVL -15 758 233 849 275 93 7 chr2 2370664 2370955 -250885628 - LTR41 LTR ERVL -457 316 1 2408 78 28 11 chr2 2371069 2371427 -250885156 - L1PA8 LINE L1 -13 6159 5796 535 311 43 20 chr2 2371711 2372211 -250884372 - L1MEd LINE L1 -4571 1739 1172 2192 117 7 0 chr2 2372208 2372517 -250884066 - AluSx SINE Alu -9 303 1 1213 219 33 91 chr2 2373382 2373432 -250883151 + MLT1A2 LTR MaLR 1 52 -322 2211 102 0 7 chr2 2373432 2373735 -250882848 - AluSq SINE Alu 0 313 13 1213 219 33 91 chr2 2373735 2374081 -250882502 + MLT1A2 LTR MaLR 52 374 0 211 286 95 29 chr2 2376453 2376558 -250880025 + MIR3 SINE MIR 49 160 -48 23 0 0 0 chr2 2376872 2376895 -250879688 + AT_rich Low_complexity Low_complexity 1 23 0 317 235 88 0 chr2 2376895 2376997 -250879586 - L1MA9 LINE L1 -22 6290 6180 1700 205 57 8 chr2 2377003 2377281 -250879302 - L1MA9 LINE L1 -235 6077 5775 225 83 0 0 chr2 2377281 2377317 -250879266 + (TG)n Simple_repeat Simple_repeat 1 36 0 1700 205 57 8 chr2 2377317 2377408 -250879175 - L1MA9 LINE L1 -537 5775 5690 312 153 53 38 chr2 2377980 2378111 -250878472 + (AGTTG)n Simple_repeat Simple_repeat 3 135 0 1201 240 53 120 chr2 2378286 2378891 -250877692 - MLT1E1 LTR MaLR 0 637 92 189 340 20 30 chr2 2379174 2379274 -250877309 - MIR SINE MIR -62 146 48 2114 122 0 10 chr2 2379543 2379847 -250876736 - AluSx SINE Alu -9 303 3 279 322 0 11 chr2 2381279 2381366 -250875217 + MIR3 SINE MIR 117 202 -6 487 157 24 0 chr2 2381394 2381477 -250875106 - L1MB5 LINE L1 -12 6162 6078 1444 136 9 5 chr2 2383315 2383535 -250873048 + AluSq SINE Alu 71 291 -22 899 248 17 8 chr2 2384019 2384253 -250872330 + MLT1D LTR MaLR 7 242 -263 473 311 54 11 chr2 2385051 2385311 -250871272 - MER90 LTR ERV1 -210 404 134 216 200 0 0 chr2 2385710 2385775 -250870808 + GA-rich Low_complexity Low_complexity 2 66 0 184 79 48 48 chr2 2387164 2387227 -250869356 + (CAA)n Simple_repeat Simple_repeat 3 65 0 292 205 26 45 chr2 2387227 2387383 -250869200 + (CACAC)n Simple_repeat Simple_repeat 1 153 0 207 62 62 31 chr2 2387419 2387484 -250869099 + (CACAA)n Simple_repeat Simple_repeat 5 71 0 224 130 48 48 chr2 2387595 2387741 -250868842 + (CACAA)n Simple_repeat Simple_repeat 2 147 0 285 255 157 24 chr2 2388653 2388890 -250867693 + MLT1J1 LTR MaLR 19 296 -154 196 298 48 48 chr2 2389394 2389498 -250867085 + L2 LINE L2 3208 3311 -2 201 313 12 0 chr2 2389899 2389979 -250866604 - MIR SINE MIR 0 262 182 197 358 0 15 chr2 2389990 2390057 -250866526 - MIR SINE MIR -181 81 16 217 300 127 36 chr2 2390887 2391107 -250865476 + L2 LINE L2 2945 3184 -129 1367 306 37 15 chr2 2391132 2391592 -250864991 - MLT1J LTR MaLR -19 492 23 2318 106 0 0 chr2 2391814 2392125 -250864458 + AluSx SINE Alu 1 311 -1 1519 197 122 22 chr2 2395817 2396177 -250860406 - MSTD LTR MaLR 0 396 1 852 108 7 40 chr2 2397414 2397562 -250859021 - FLAM_C SINE Alu 0 143 1 962 156 6 19 chr2 2397790 2397950 -250858633 + L1PA8A LINE L1 5971 6128 -3 1589 277 47 38 chr2 2398459 2399036 -250857547 + MLT1E LTR MaLR 10 591 -2 368 265 0 6 chr2 2401512 2401682 -250854901 + C-rich Low_complexity Low_complexity 4 172 0 294 138 50 12 chr2 2401685 2401765 -250854818 + CT-rich Low_complexity Low_complexity 3 85 0 2072 137 42 31 chr2 2401845 2402204 -250854379 + THE1B LTR MaLR 1 363 -1 250 242 30 0 chr2 2402568 2402634 -250853949 + L2 LINE L2 2987 3054 -218 191 244 22 0 chr2 2402700 2402745 -250853838 + L2 LINE L2 3223 3268 -4 375 289 97 50 chr2 2404742 2405123 -250851460 + HAL1 LINE L1 1 399 -2108 1057 222 31 13 chr2 2405464 2405689 -250850894 - MER101B LTR ERV1 -341 229 1 374 366 79 9 chr2 2405702 2406030 -250850553 + HAL1 LINE L1 491 841 -1666 461 205 252 0 chr2 2406774 2406891 -250849692 + MLT2D LTR ERVL 226 312 -102 198 0 0 0 chr2 2406891 2406913 -250849670 + (TC)n Simple_repeat Simple_repeat 1 22 0 461 205 252 0 chr2 2406913 2406946 -250849637 + MLT2D LTR ERVL 312 414 0 471 240 0 0 chr2 2407870 2407966 -250848617 - L1MA7 LINE L1 -186 6105 6010 629 183 41 41 chr2 2407969 2408138 -250848445 + L1MA7 LINE L1 6123 6291 0 198 209 47 0 chr2 2408758 2408801 -250847782 - MIR SINE MIR -111 151 107 249 326 38 15 chr2 2410193 2410325 -250846258 + L1ME LINE L1 5634 5768 -353 2303 102 0 6 chr2 2410562 2410876 -250845707 + AluSx SINE Alu 1 312 0 254 284 69 35 chr2 2411342 2411458 -250845125 + MIR3 SINE MIR 62 181 -27 193 231 123 15 chr2 2412774 2412839 -250843744 - MIR SINE MIR -118 144 73 216 0 0 0 chr2 2414333 2414357 -250842226 + (GGATG)n Simple_repeat Simple_repeat 3 26 0 306 287 189 14 chr2 2414887 2415030 -250841553 - MIR SINE MIR 0 262 95 774 244 114 36 chr2 2416432 2416739 -250839844 + MLT1D LTR MaLR 47 377 -128 192 195 0 24 chr2 2417645 2417686 -250838897 + MIR SINE MIR 33 72 -136 189 107 0 0 chr2 2418193 2418221 -250838362 + (TC)n Simple_repeat Simple_repeat 2 29 0 319 355 112 0 chr2 2419705 2419874 -250836709 - MIR SINE MIR -19 243 56 364 252 37 0 chr2 2420012 2420119 -250836464 + LTR33 LTR ERVL 101 211 -310 2188 92 3 0 chr2 2421371 2421665 -250834918 - AluSx SINE Alu -17 295 1 324 358 0 15 chr2 2423086 2423220 -250833363 - MER94 DNA DNA -2 132 1 222 343 59 20 chr2 2423502 2423604 -250832979 + L2 LINE L2 2948 3053 -219 227 375 36 27 chr2 2425396 2425508 -250831075 - L2 LINE L2 -18 3254 3142 360 0 0 0 chr2 2425710 2425750 -250830833 + (CA)n Simple_repeat Simple_repeat 1 40 0 234 0 0 0 chr2 2425749 2425775 -250830808 + (GA)n Simple_repeat Simple_repeat 2 27 0 * 220 356 134 18 chr2 2426153 2426706 -250829877 + L2 LINE L2 2325 2941 -373 187 185 160 76 chr2 2426874 2426993 -250829590 + L2 LINE L2 3137 3265 -7 250 226 11 113 chr2 2427350 2427536 -250829047 + GA-rich Low_complexity Low_complexity 5 171 0 224 255 246 0 chr2 2428941 2429060 -250827523 - MIR SINE MIR -65 143 41 21 0 0 0 chr2 2429335 2429356 -250827227 + AT_rich Low_complexity Low_complexity 1 21 0 240 297 63 51 chr2 2430329 2430504 -250826079 - MIR SINE MIR -6 256 80 237 394 32 7 chr2 2430916 2431071 -250825512 - L2 LINE L2 -599 2715 2557 350 289 0 0 chr2 2431084 2431167 -250825416 + L2 LINE L2 3189 3271 -1 206 223 0 109 chr2 2431619 2431812 -250824771 + C-rich Low_complexity Low_complexity 5 176 0 218 230 0 102 chr2 2432014 2432210 -250824373 + C-rich Low_complexity Low_complexity 2 177 0 252 208 18 83 chr2 2432293 2432461 -250824122 + C-rich Low_complexity Low_complexity 2 158 0 741 230 73 0 chr2 2432595 2432760 -250823823 - MER5B DNA MER1_type -1 177 1 1611 235 40 6 chr2 2434630 2434983 -250821600 - MLT1A1 LTR MaLR 0 365 1 738 323 126 41 chr2 2435116 2436095 -250820488 + L2 LINE L2 206 1267 -2047 236 298 50 16 chr2 2436098 2436219 -250820364 + L2 LINE L2 1581 1705 -1609 625 197 16 0 chr2 2436366 2436493 -250820090 + L1MC2 LINE L1 6215 6343 -1 571 269 84 52 chr2 2437507 2437988 -250818595 - MLT1H1 LTR MaLR 0 555 62 1046 132 44 11 chr2 2438251 2438565 -250818018 + THE1C LTR MaLR 1 375 0 10524 126 17 14 chr2 2438565 2440140 -250816443 + THE1C-int LTR MaLR 1 1580 0 1065 127 78 11 chr2 2440140 2440444 -250816139 + THE1C LTR MaLR 1 375 0 242 292 67 0 chr2 2440490 2440579 -250816004 - LTR16A LTR ERVL -260 190 96 276 330 19 0 chr2 2440958 2441064 -250815519 - HERV16 LTR ERVL -3575 1421 1314 212 209 0 0 chr2 2442068 2442111 -250814472 - L3 LINE CR1 -124 1453 1411 318 301 66 22 chr2 2442209 2442392 -250814191 - LTR16A LTR ERVL -93 357 167 359 200 42 11 chr2 2442447 2442542 -250814041 + L1MD3 LINE L1 7898 7995 0 236 310 159 7 chr2 2443227 2443372 -250813211 + MIR SINE MIR 14 180 -82 1711 193 171 8 chr2 2443654 2444022 -250812561 + MSTA LTR MaLR 1 428 0 467 297 31 0 chr2 2445666 2445794 -250810789 + MIR3 SINE MIR 72 203 -5 943 233 43 4 chr2 2446088 2446320 -250810263 - MLT1E LTR MaLR -9 584 344 413 295 63 16 chr2 2446407 2446597 -250809986 - MLT1E LTR MaLR -394 199 1 320 300 131 31 chr2 2446678 2447098 -250809485 - L2 LINE L2 -365 2949 2488 188 228 88 35 chr2 2447485 2447542 -250809041 + L2 LINE L2 3206 3265 -7 1272 270 91 0 chr2 2450278 2450596 -250805987 + MER7A DNA MER2_type 1 345 -1 332 303 0 64 chr2 2454566 2454806 -250801777 + C-rich Low_complexity Low_complexity 1 224 0 307 77 19 0 chr2 2456406 2456458 -250800125 - AluSx SINE Alu 0 301 249 1181 135 65 0 chr2 2456458 2456643 -250799940 - AluSx SINE Alu -115 197 1 349 307 50 14 chr2 2457148 2457288 -250799295 + MIR SINE MIR 5 149 -113 2080 259 39 74 chr2 2458244 2458654 -250797929 + MER21B LTR ERV1 1 373 -490 2354 111 39 28 chr2 2458654 2459014 -250797569 - THE1B LTR MaLR 0 364 1 2080 259 39 74 chr2 2459014 2459369 -250797214 + MER21B LTR ERV1 373 739 -124 315 271 243 11 chr2 2460495 2460672 -250795911 - MIR SINE MIR 0 262 45 250 352 19 0 chr2 2463116 2463221 -250793362 + MIR SINE MIR 31 137 -71 2200 151 8 30 chr2 2463959 2464331 -250792252 - THE1B LTR MaLR 0 364 1 302 353 131 20 chr2 2464389 2464986 -250791597 + L2 LINE L2 2047 2709 -605 2297 220 59 108 chr2 2465190 2465275 -250791308 + L1MC4 LINE L1 6460 6548 -1447 2166 91 10 3 chr2 2465275 2465573 -250791010 + AluSq SINE Alu 1 300 -13 2297 220 59 108 chr2 2465573 2466794 -250789789 + L1MC4 LINE L1 6548 7757 -238 384 22 0 0 chr2 2470150 2470195 -250786388 + (TG)n Simple_repeat Simple_repeat 2 46 0 * 441 0 0 0 chr2 2470194 2470243 -250786340 + (TA)n Simple_repeat Simple_repeat 1 49 0 274 326 52 22 chr2 2470576 2470711 -250785872 - LTR16A1 LTR ERVL 0 457 319 234 0 0 0 chr2 2471163 2471189 -250785394 + (TGAA)n Simple_repeat Simple_repeat 2 27 0 183 302 63 0 chr2 2471325 2471388 -250785195 + MIR SINE MIR 73 139 -123 4915 42 2 0 chr2 2471917 2472495 -250784088 + L1PA5 LINE L1 5576 6154 0 182 313 104 87 chr2 2472509 2472960 -250783623 - L2 LINE L2 -480 2834 2376 2157 117 0 0 chr2 2473991 2474297 -250782286 + AluSx SINE Alu 1 306 0 284 287 116 31 chr2 2474333 2474462 -250782121 + MIR SINE MIR 1 140 -122 221 363 66 0 chr2 2474952 2475043 -250781540 - MIR SINE MIR -115 147 51 280 286 55 11 chr2 2477760 2477851 -250778732 + L2 LINE L2 3162 3256 -16 1434 266 93 21 chr2 2481122 2481634 -250774949 - MER82 DNA MER2_type -6 647 99 1404 232 78 5 chr2 2481634 2481979 -250774604 + MLT2D LTR ERVL 1 378 -36 342 0 0 0 chr2 2481979 2482017 -250774566 + (CA)n Simple_repeat Simple_repeat 2 39 0 1404 232 78 5 chr2 2482017 2482055 -250774528 + MLT2D LTR ERVL 378 412 -2 417 176 0 0 chr2 2482061 2482129 -250774454 - MER82 DNA MER2_type -556 97 30 192 169 102 34 chr2 2485006 2485065 -250771518 + MIR SINE MIR 91 153 -55 347 301 18 26 chr2 2485394 2485507 -250771076 + MIR SINE MIR 21 132 -76 463 227 120 7 chr2 2485632 2485782 -250770801 + MER58B DNA MER1_type 172 338 -3 215 233 0 14 chr2 2487431 2487504 -250769079 + GA-rich Low_complexity Low_complexity 1 72 0 680 179 6 28 chr2 2487522 2487701 -250768882 + GA-rich Low_complexity Low_complexity 1 175 0 293 295 93 27 chr2 2488019 2488202 -250768381 - MLT1J1 LTR MaLR -16 430 236 337 358 18 0 chr2 2488235 2488400 -250768183 - MLT1J2 LTR MaLR -279 171 4 2573 103 22 8 chr2 2488451 2488809 -250767774 + THE1B LTR MaLR 1 363 -1 13040 119 18 6 chr2 2489160 2491208 -250765375 - Tigger1 DNA MER2_type 0 2418 346 194 291 0 0 chr2 2491868 2491923 -250764660 - L2 LINE L2 -575 2739 2685 335 228 79 59 chr2 2493851 2493952 -250762631 - L1ME4a LINE L1 -12 6109 6007 347 350 55 14 chr2 2494556 2494773 -250761810 - MIR SINE MIR -15 247 22 280 229 16 0 chr2 2495840 2495901 -250760682 + L2 LINE L2 2998 3059 -213 188 323 0 0 chr2 2496069 2496131 -250760452 + L2 LINE L2 3187 3248 -24 233 353 8 8 chr2 2496146 2496265 -250760318 + MLT1E LTR MaLR 44 162 -431 244 233 41 0 chr2 2496299 2496372 -250760211 + MLT1E LTR MaLR 431 506 -87 215 324 65 88 chr2 2496588 2496758 -250759825 + MIR SINE MIR 1 166 -96 271 298 67 0 chr2 2496764 2496868 -250759715 - L2 LINE L2 -8 3264 3154 3592 14 0 10 chr2 2498349 2498793 -250757790 - L1PA2 LINE L1 0 6155 5747 4075 8 0 0 chr2 2498793 2499269 -250757314 + L1PA2 LINE L1 5279 5754 -401 248 318 131 0 chr2 2499832 2499939 -250756644 + MIR SINE MIR 33 153 -55 268 271 10 165 chr2 2500342 2500737 -250755846 - L2 LINE L2 -80 3233 2900 204 329 0 14 chr2 2500726 2500799 -250755784 + L2 LINE L2 3242 3313 0 * 2615 62 0 0 chr2 2500802 2501110 -250755473 - AluY SINE Alu -3 308 1 309 269 168 30 chr2 2501165 2501332 -250755251 - L2 LINE L2 -493 2821 2632 264 156 0 0 chr2 2501444 2501489 -250755094 + L1PA16 LINE L1 6121 6165 -1 5686 250 58 45 chr2 2501785 2502260 -250754323 + L1MB1 LINE L1 1182 1649 -4755 19332 45 0 1 chr2 2502260 2505411 -250751172 - L1PA5 LINE L1 -4 6150 3001 5686 250 58 45 chr2 2505411 2505552 -250751031 + L1MB1 LINE L1 1649 1787 -4617 180 0 0 0 chr2 2505552 2505572 -250751011 + (CA)n Simple_repeat Simple_repeat 1 20 0 5686 250 58 45 chr2 2505572 2507549 -250749034 + L1MB1 LINE L1 1787 3736 -2668 664 122 0 0 chr2 2507549 2507639 -250748944 + AluJ/FLAM SINE Alu 13 102 -210 676 200 0 16 chr2 2507646 2507771 -250748812 + FRAM SINE Alu 53 175 -1 5686 250 58 45 chr2 2507771 2510274 -250746309 + L1MB1 LINE L1 3741 6402 -2 3671 201 57 103 chr2 2510297 2511076 -250745507 - MLT1B-int LTR MaLR -125 1246 551 2722 123 0 5 chr2 2511076 2511484 -250745099 - L1PA13 LINE L1 0 6163 5758 3671 201 57 103 chr2 2511484 2512011 -250744572 - MLT1B-int LTR MaLR -820 551 1 1596 188 48 10 chr2 2512011 2512383 -250744200 - MLT1B LTR MaLR 0 467 1 509 239 5 0 chr2 2512397 2512620 -250743963 + (TG)n Simple_repeat Simple_repeat 1 224 0 190 366 46 7 chr2 2512647 2512800 -250743783 - L2 LINE L2 -1364 1950 1792 252 243 14 0 chr2 2513432 2513506 -250743077 + HAL1 LINE L1 2322 2396 -111 208 254 42 14 chr2 2514935 2515006 -250741577 + L3 LINE CR1 1349 1421 -156 214 356 57 26 chr2 2515420 2515614 -250740969 + L3 LINE CR1 1244 1443 -134 311 282 36 45 chr2 2516066 2516176 -250740407 + MIR SINE MIR 38 146 -62 425 315 56 28 chr2 2516745 2516923 -250739660 - MIR SINE MIR -6 256 74 780 271 199 14 chr2 2517031 2517448 -250739135 + MLT1D LTR MaLR 2 495 -10 295 302 232 23 chr2 2517508 2517978 -250738605 + L2 LINE L2 2172 2739 -575 743 203 96 12 chr2 2518334 2518642 -250737941 + MSTD LTR MaLR 6 395 -1 294 293 95 26 chr2 2518645 2518761 -250737822 + L2 LINE L2 3188 3311 -2 337 356 10 0 chr2 2518788 2518892 -250737691 - MIR SINE MIR -99 163 59 701 329 109 22 chr2 2519568 2520064 -250736519 - MLT1G LTR MaLR 0 590 52 1905 181 35 46 chr2 2520126 2520557 -250736026 - MSTC LTR MaLR 0 428 3 1373 197 30 10 chr2 2520583 2520878 -250735705 - MLT1B LTR MaLR -19 371 71 210 184 20 0 chr2 2524251 2524300 -250732283 + (CA)n Simple_repeat Simple_repeat 1 50 0 189 365 90 23 chr2 2526059 2526325 -250730258 - L2 LINE L2 -788 2526 2243 294 95 0 0 chr2 2526408 2526450 -250730133 + (GA)n Simple_repeat Simple_repeat 1 42 0 429 54 0 0 chr2 2526734 2526790 -250729793 + (TGGA)n Simple_repeat Simple_repeat 2 57 0 266 316 0 0 chr2 2527046 2527125 -250729458 + (CA)n Simple_repeat Simple_repeat 2 80 0 659 209 47 29 chr2 2528991 2529163 -250727420 + MLT1A1 LTR MaLR 1 175 -190 2403 239 38 63 chr2 2529177 2530125 -250726458 + MLT1A1-int LTR MaLR 124 1118 -617 1237 212 141 96 chr2 2530118 2530566 -250726017 + MLT1A1-int LTR MaLR 1268 1735 0 * 823 231 5 39 chr2 2530566 2530769 -250725814 + MLT1A1 LTR MaLR 1 196 -169 964 221 20 0 chr2 2530787 2530986 -250725597 + MLT1A1 LTR MaLR 161 363 -2 1880 121 82 25 chr2 2532265 2532620 -250723963 - THE1C LTR MaLR 0 375 1 420 72 40 59 chr2 2535020 2535172 -250721411 + (CA)n Simple_repeat Simple_repeat 2 150 0 201 184 48 39 chr2 2535175 2535278 -250721305 + (CACAC)n Simple_repeat Simple_repeat 4 107 0 268 103 52 31 chr2 2535281 2535378 -250721205 + (CA)n Simple_repeat Simple_repeat 1 99 0 207 213 0 21 chr2 2535588 2535635 -250720948 + CT-rich Low_complexity Low_complexity 1 46 0 412 198 16 59 chr2 2535786 2536060 -250720523 + GA-rich Low_complexity Low_complexity 1 262 0 200 237 68 0 chr2 2536384 2536443 -250720140 + CT-rich Low_complexity Low_complexity 4 66 0 238 253 0 111 chr2 2536531 2536630 -250719953 + MER94 DNA DNA 30 117 -17 193 354 21 10 chr2 2538320 2538416 -250718167 + L2 LINE L2 2666 2762 -552 933 257 41 55 chr2 2538653 2539019 -250717564 + MLT1B LTR MaLR 5 365 -25 577 205 22 6 chr2 2539291 2539822 -250716761 + (CA)n Simple_repeat Simple_repeat 1 539 0 254 159 0 79 chr2 2539822 2539885 -250716698 - MER4-int LTR ERV1 -5432 1166 1109 268 176 29 0 chr2 2539895 2539963 -250716620 + (CA)n Simple_repeat Simple_repeat 2 71 0 301 298 33 58 chr2 2539963 2540084 -250716499 - L1MC4 LINE L1 -1337 6705 6588 359 260 18 11 chr2 2540119 2540405 -250716178 + (CA)n Simple_repeat Simple_repeat 1 288 0 271 195 183 0 chr2 2542170 2542252 -250714331 + MIR SINE MIR 61 157 -105 528 366 32 35 chr2 2542468 2542930 -250713653 + L2 LINE L2 2156 2616 -698 22 0 0 0 chr2 2543091 2543113 -250713470 + AT_rich Low_complexity Low_complexity 1 22 0 531 0 0 0 chr2 2543621 2543680 -250712903 + (TA)n Simple_repeat Simple_repeat 1 59 0 270 88 35 53 chr2 2543680 2543737 -250712846 + LTR33A LTR ERVL 450 505 -18 23 0 0 0 chr2 2544355 2544378 -250712205 + AT_rich Low_complexity Low_complexity 1 23 0 463 335 11 47 chr2 2545017 2545208 -250711375 + L1ME4a LINE L1 5731 5914 -207 270 300 47 0 chr2 2545218 2545368 -250711215 + L1ME4a LINE L1 5956 6112 -9 572 306 40 76 chr2 2545726 2546147 -250710436 + L2 LINE L2 2127 2532 -782 184 333 0 0 chr2 2546248 2546302 -250710281 - MIR SINE MIR -128 134 81 275 303 11 22 chr2 2547582 2547760 -250708823 + (TGAG)n Simple_repeat Simple_repeat 4 179 0 388 223 54 18 chr2 2550548 2550660 -250705923 - MIR3 SINE MIR 0 208 93 413 286 104 16 chr2 2550830 2551022 -250705561 - MIR SINE MIR -48 214 6 3795 122 23 28 chr2 2551210 2551810 -250704773 + MER4A LTR ERV1 1 597 -3 251 179 45 143 chr2 2552991 2553103 -250703480 - MLT1L LTR MaLR -220 395 295 520 238 41 8 chr2 2555343 2555465 -250701118 - MIR SINE MIR -70 192 67 326 262 0 36 chr2 2555542 2555626 -250700957 - MIR SINE MIR -29 233 153 1152 269 97 3 chr2 2555699 2556121 -250700462 + L1ME1 LINE L1 5717 6334 0 273 375 26 7 chr2 2557066 2557218 -250699365 - MIR SINE MIR -50 212 58 186 247 129 54 chr2 2557230 2557323 -250699260 - MIR SINE MIR -3 259 160 282 242 60 100 chr2 2557328 2557621 -250698962 + MLT1I LTR MaLR 1 269 -140 266 279 0 0 chr2 2558358 2558419 -250698164 + L2 LINE L2 3208 3268 -4 277 293 105 11 chr2 2559042 2559223 -250697360 + MLT1J1 LTR MaLR 1 198 -248 296 260 115 29 chr2 2559263 2559367 -250697216 + MLT1J2 LTR MaLR 291 403 -47 499 261 210 5 chr2 2559393 2559820 -250696763 + L2 LINE L2 2696 3217 -96 555 173 0 0 chr2 2559829 2559997 -250696586 + (TG)n Simple_repeat Simple_repeat 2 169 0 398 266 0 0 chr2 2559997 2560091 -250696492 + L2 LINE L2 3218 3311 -2 288 137 0 0 chr2 2560871 2560922 -250695661 + (T)n Simple_repeat Simple_repeat 1 51 0 274 239 28 0 chr2 2562272 2562343 -250694240 - L1MA6 LINE L1 -167 6133 6061 2779 194 224 67 chr2 2564763 2565643 -250690940 - LTR28 LTR ERV1 -2 1018 1 199 261 92 0 chr2 2566166 2566231 -250690352 - L2 LINE L2 -10 3303 3233 273 152 0 0 chr2 2568405 2568451 -250688132 + U6 snRNA snRNA 62 107 0 2054 123 3 0 chr2 2568632 2568925 -250687658 - AluSp SINE Alu -19 294 1 371 304 43 46 chr2 2569207 2569552 -250687031 - L1ME LINE L1 -561 5601 5258 588 370 61 26 chr2 2569574 2570134 -250686449 - L1ME LINE L1 -922 5224 4640 1660 169 21 17 chr2 2570135 2570432 -250686151 - AluJo SINE Alu -26 286 1 1171 151 47 0 chr2 2570445 2570657 -250685926 - L1M2 LINE L1 -647 5644 5423 860 211 0 0 chr2 2570652 2570818 -250685765 + L1M2 LINE L1 5628 5793 -507 * 437 187 0 37 chr2 2570818 2571005 -250685578 + (TA)n Simple_repeat Simple_repeat 1 180 0 568 161 4 35 chr2 2571016 2571278 -250685305 + (TA)n Simple_repeat Simple_repeat 1 253 0 317 309 73 20 chr2 2571307 2571553 -250685030 + L1MC3 LINE L1 5750 6008 -1777 * 2385 128 39 25 chr2 2571339 2571770 -250684813 + L1MA8 LINE L1 5782 6218 -73 300 286 86 37 chr2 2571781 2572026 -250684557 - L1ME LINE L1 -1503 4643 4387 1625 180 32 18 chr2 2572085 2572392 -250684191 + AluSx SINE Alu 1 311 0 477 311 70 31 chr2 2572403 2572544 -250684039 + MIR SINE MIR 1 156 -106 1818 189 36 3 chr2 2572544 2572877 -250683706 - MER7A DNA MER2_type -1 345 4 477 311 70 31 chr2 2572877 2572963 -250683620 + MIR SINE MIR 156 237 -25 1712 236 17 48 chr2 2573658 2574140 -250682443 - MLT1C LTR MaLR 0 467 1 299 352 34 11 chr2 2574368 2574544 -250682039 - MIR SINE MIR -36 226 47 309 303 32 50 chr2 2577223 2577444 -250679139 - L2 LINE L2 -15 3298 3082 254 332 114 15 chr2 2577608 2577942 -250678641 - L2 LINE L2 -559 2755 2389 2546 163 19 26 chr2 2578211 2578565 -250678018 - MSTB LTR MaLR 0 426 74 2381 98 0 0 chr2 2578565 2578870 -250677713 - AluSg SINE Alu -5 305 1 2546 163 19 26 chr2 2578870 2578944 -250677639 - MSTB LTR MaLR -352 74 1 199 373 20 51 chr2 2579233 2579488 -250677095 + L2 LINE L2 2601 2847 -467 849 207 78 132 chr2 2580628 2580868 -250675715 - MLT1A1 LTR MaLR 0 365 113 1960 81 16 0 chr2 2580868 2581116 -250675467 + AluSp SINE Alu 44 295 -18 849 207 78 132 chr2 2581116 2581177 -250675406 - MLT1A1 LTR MaLR -252 113 87 2134 119 10 3 chr2 2581177 2581479 -250675104 - AluSg SINE Alu -6 304 1 849 207 78 132 chr2 2581479 2581562 -250675021 - MLT1A1 LTR MaLR -278 87 1 1561 273 127 25 chr2 2581751 2582443 -250674140 - L1MC4 LINE L1 -87 7955 7193 241 338 50 12 chr2 2582539 2582699 -250673884 - MIR SINE MIR -12 250 85 2270 155 22 28 chr2 2582701 2583158 -250673425 - MSTB2 LTR MaLR -3 454 1 32 0 0 0 chr2 2583792 2583824 -250672759 + AT_rich Low_complexity Low_complexity 1 32 0 2232 120 10 0 chr2 2584188 2584487 -250672096 + AluSx SINE Alu 1 302 -10 186 222 0 0 chr2 2585287 2585341 -250671242 + A-rich Low_complexity Low_complexity 1 54 0 1172 220 97 61 chr2 2585370 2585815 -250670768 + MER101 LTR ERV1 5 465 -9 316 280 33 40 chr2 2585839 2585989 -250670594 + L1ME LINE L1 2926 3074 -3072 415 269 17 29 chr2 2586329 2586504 -250670079 + L1ME LINE L1 5574 5746 -375 3880 164 28 17 chr2 2586527 2587241 -250669342 + MER72 LTR ERV1 1 722 0 219 323 91 0 chr2 2587738 2587837 -250668746 - MIR SINE MIR -63 145 38 283 261 72 36 chr2 2589720 2589831 -250666752 + L2 LINE L2 3125 3239 -33 193 196 22 0 chr2 2590113 2590159 -250666424 + L2 LINE L2 3262 3308 -5 217 273 30 0 chr2 2590271 2590337 -250666246 + MIR SINE MIR 86 153 -109 293 265 15 0 chr2 2590421 2590489 -250666094 - L2 LINE L2 0 3313 3245 495 329 111 19 chr2 2590731 2591047 -250665536 - L2 LINE L2 -18 3254 2910 187 344 66 33 chr2 2592198 2592307 -250664276 + MIR SINE MIR 93 210 -52 2329 81 13 3 chr2 2592307 2592617 -250663966 + AluSq SINE Alu 1 313 0 187 344 66 33 chr2 2592617 2592658 -250663925 + MIR SINE MIR 210 248 -14 397 186 0 72 chr2 2593277 2593470 -250663113 + C-rich Low_complexity Low_complexity 2 180 0 467 272 35 0 chr2 2593487 2593660 -250662923 + C-rich Low_complexity Low_complexity 2 180 0 365 314 0 0 chr2 2593673 2593848 -250662735 + (CACCC)n Simple_repeat Simple_repeat 4 178 0 2156 113 0 0 chr2 2595277 2595559 -250661024 + AluSx SINE Alu 3 284 -28 754 240 134 55 chr2 2597270 2597636 -250658947 - MSTD LTR MaLR -1 395 1 278 304 21 29 chr2 2597669 2597821 -250658762 - MIR SINE MIR -67 141 3 2127 89 0 4 chr2 2598117 2598388 -250658195 + AluSc SINE Alu 25 294 -15 528 105 26 0 chr2 2599208 2599326 -250657257 + AluSg/x SINE Alu 201 320 0 27 29 0 0 chr2 2599999 2600033 -250656550 + AT_rich Low_complexity Low_complexity 1 34 0 248 285 36 67 chr2 2601376 2601541 -250655042 - L2 LINE L2 -1 3312 3153 312 339 23 8 chr2 2601644 2601774 -250654809 + L2 LINE L2 3137 3268 -4 4494 187 55 23 chr2 2601778 2602751 -250653832 - L1MA9 LINE L1 -38 6274 5270 2118 217 70 2 chr2 2602750 2603248 -250653335 + L1MA9 LINE L1 4728 5259 -887 * 2126 144 0 3 chr2 2603911 2604216 -250652367 - AluJb SINE Alu -6 306 3 485 224 63 29 chr2 2607088 2607262 -250649321 - MER104 DNA MER2_type 0 180 1 361 252 112 65 chr2 2608376 2608654 -250647929 + L1MC5 LINE L1 7626 7916 -45 2526 72 0 0 chr2 2609219 2609526 -250647057 + AluY SINE Alu 1 307 -4 333 265 8 98 chr2 2609542 2609674 -250646909 + L1ME4a LINE L1 5580 5699 -422 386 218 0 0 chr2 2609711 2609789 -250646794 + L1ME4a LINE L1 5784 5861 -260 2167 128 0 3 chr2 2609888 2610185 -250646398 + AluSg SINE Alu 3 298 -12 4629 208 49 36 chr2 2610270 2611968 -250644615 - L1MC2 LINE L1 -8 6754 5038 1789 174 0 10 chr2 2611968 2612261 -250644322 + AluJo SINE Alu 10 299 -13 4629 208 49 36 chr2 2612261 2612413 -250644170 - L1MC2 LINE L1 -1724 5038 4890 4965 229 70 87 chr2 2612426 2612489 -250644094 - L1MC2 LINE L1 -2113 4451 4388 2068 164 44 29 chr2 2612489 2612873 -250643710 + MLT1B LTR MaLR 1 390 0 4965 229 70 87 chr2 2612873 2613521 -250643062 - L1MC2 LINE L1 -2176 4388 3731 216 0 0 0 chr2 2613521 2613545 -250643038 + (TC)n Simple_repeat Simple_repeat 2 25 0 4965 229 70 87 chr2 2613545 2613650 -250642933 - L1MC2 LINE L1 -2833 3731 3626 721 284 0 0 chr2 2613650 2613819 -250642764 + MER6B DNA MER2_type 2 170 -40 4965 229 70 87 chr2 2613819 2615523 -250641060 - L1MC2 LINE L1 -2938 3626 1787 2892 194 29 23 chr2 2615526 2615677 -250640906 - L1MC2 LINE L1 -4852 1193 1044 2595 115 3 13 chr2 2615677 2616052 -250640531 + THE1C LTR MaLR 1 371 -4 2892 194 29 23 chr2 2616052 2616922 -250639661 - L1MC2 LINE L1 -5001 1044 517 193 138 52 52 chr2 2617626 2617684 -250638899 - MIR SINE MIR -65 143 86 348 174 101 18 chr2 2618211 2618320 -250638263 - ORSL DNA AcHobo -91 184 67 297 274 0 0 chr2 2619497 2619592 -250636991 + (TG)n Simple_repeat Simple_repeat 2 96 0 26 30 0 0 chr2 2619838 2619871 -250636712 + AT_rich Low_complexity Low_complexity 1 33 0 231 114 0 0 chr2 2619958 2619993 -250636590 + (A)n Simple_repeat Simple_repeat 1 35 0 2105 143 55 62 chr2 2621574 2622007 -250634576 - Tigger2a DNA MER2_type -4 430 1 180 315 54 9 chr2 2622088 2622199 -250634384 - MIR3 SINE MIR -31 177 62 2191 132 0 0 chr2 2624451 2624740 -250631843 - AluSx SINE Alu -23 289 1 316 275 148 0 chr2 2626547 2626689 -250629894 + MER45C DNA AcHobo 1 163 -790 330 281 43 49 chr2 2626865 2627050 -250629533 + MER45C DNA AcHobo 461 644 -309 1308 234 38 0 chr2 2627399 2627715 -250628868 + MER45B DNA AcHobo 713 1040 0 956 264 126 42 chr2 2629582 2630036 -250626547 + HAL1 LINE L1 597 1088 -1419 2182 127 0 0 chr2 2630036 2630335 -250626248 + AluSx SINE Alu 1 299 -13 505 298 104 31 chr2 2630347 2630703 -250625880 + L1MCc LINE L1 24 405 -6018 1725 258 131 47 chr2 2630857 2631556 -250625027 + L1MCc LINE L1 807 1446 -5495 1732 167 17 10 chr2 2631556 2631844 -250624739 + AluJb SINE Alu 7 296 -16 1725 258 131 47 chr2 2631844 2632888 -250623695 + L1MCc LINE L1 1446 2720 -4221 266 71 0 24 chr2 2632888 2632930 -250623653 + (TAGA)n Simple_repeat Simple_repeat 2 42 0 1725 258 131 47 chr2 2632930 2632964 -250623619 + L1MCc LINE L1 2720 2750 -4191 488 221 25 16 chr2 2632989 2633111 -250623472 + L1ME3A LINE L1 29 151 -6245 305 291 112 50 chr2 2633128 2633482 -250623101 + MLT1J1 LTR MaLR 6 343 -103 491 155 78 6 chr2 2634091 2634420 -250622163 + (TAGA)n Simple_repeat Simple_repeat 1 352 0 208 264 57 75 chr2 2634434 2634556 -250622027 + MIR SINE MIR 2 121 -87 185 290 210 0 chr2 2635024 2635124 -250621459 - L2 LINE L2 -2 3270 3150 254 58 0 135 chr2 2637110 2637162 -250619421 - L2 LINE L2 -5 3267 3223 26 0 0 0 chr2 2638371 2638397 -250618186 + AT_rich Low_complexity Low_complexity 1 26 0 396 59 0 0 chr2 2639056 2639107 -250617476 + (CA)n Simple_repeat Simple_repeat 2 52 0 282 123 0 0 chr2 2639221 2639278 -250617305 + (CAGA)n Simple_repeat Simple_repeat 2 58 0 188 319 72 0 chr2 2639333 2639402 -250617181 - MIR SINE MIR -61 147 74 2455 255 98 55 chr2 2640579 2640776 -250615807 + L1ME3A LINE L1 1230 1417 -4824 985 295 144 17 chr2 2640776 2641352 -250615231 - MLT1E1 LTR MaLR -1 653 5 2455 255 98 55 chr2 2641352 2643932 -250612651 + L1ME3A LINE L1 1417 4295 -1946 1813 151 141 26 chr2 2643932 2644316 -250612267 - MSTA LTR MaLR 0 428 1 2455 255 98 55 chr2 2644316 2646341 -250610242 + L1ME3A LINE L1 4295 6232 -9 1164 170 58 145 chr2 2646423 2646823 -250609760 - MLT1A1 LTR MaLR 0 365 1 21 0 0 0 chr2 2648951 2648972 -250607611 + AT_rich Low_complexity Low_complexity 1 21 0 2283 103 3 0 chr2 2648975 2649267 -250607316 + AluSq SINE Alu 1 293 -20 5117 121 56 39 chr2 2650413 2652054 -250604529 + L1PA16 LINE L1 4495 6166 0 310 292 46 8 chr2 2652109 2652239 -250604344 + MIR3 SINE MIR 74 208 0 40 37 0 0 chr2 2652244 2652298 -250604285 + AT_rich Low_complexity Low_complexity 1 54 0 561 249 60 2 chr2 2652575 2652764 -250603819 - MIR SINE MIR -50 212 15 195 372 78 35 chr2 2654121 2654492 -250602091 - L2 LINE L2 -603 2711 2325 1043 177 36 64 chr2 2654538 2654758 -250601825 + AluJo SINE Alu 68 281 -31 4222 145 21 39 chr2 2654762 2654889 -250601694 + L1MA7 LINE L1 5484 5612 -679 2130 122 0 44 chr2 2654889 2655208 -250601375 + AluSx SINE Alu 5 309 -3 4222 145 21 39 chr2 2655208 2655903 -250600680 + L1MA7 LINE L1 5612 6291 0 392 88 81 0 chr2 2656052 2656132 -250600451 - L1MB1 LINE L1 -1 6167 6098 5309 79 11 4 chr2 2656165 2656524 -250600059 - L1PB1 LINE L1 -2 6149 5794 414 0 0 0 chr2 2656524 2656570 -250600013 + (TG)n Simple_repeat Simple_repeat 2 47 0 5309 79 11 4 chr2 2656570 2656931 -250599652 - L1PB1 LINE L1 -357 5794 5424 307 327 35 7 chr2 2657070 2657280 -250599303 + MIR SINE MIR 5 218 -44 1162 220 112 67 chr2 2657284 2657739 -250598844 - MLT1H LTR MaLR -1 548 22 358 300 91 28 chr2 2658376 2658629 -250597954 + MLT1J LTR MaLR 236 504 -7 495 213 148 41 chr2 2659247 2659491 -250597092 + HAL1b LINE L1 726 995 -353 261 182 18 0 chr2 2659672 2659727 -250596856 - MLT2B1 LTR ERVL 0 520 465 183 80 0 0 chr2 2659731 2659756 -250596827 + (CATATA)n Simple_repeat Simple_repeat 2 26 0 898 214 147 136 chr2 2659810 2660170 -250596413 - MLT2B1 LTR ERVL -50 364 1 2340 99 0 3 chr2 2663208 2663502 -250593081 - AluSx SINE Alu -19 293 1 258 173 0 0 chr2 2663533 2663585 -250592998 - L1MB8 LINE L1 -14 6164 6113 * 5933 193 25 12 chr2 2663582 2665324 -250591259 + L1M2 LINE L1 4027 5787 -525 12666 175 51 24 chr2 2665325 2667801 -250588782 + L1P2 LINE L1 2251 4660 -1494 343 67 0 0 chr2 2667801 2667846 -250588737 + MADE1 DNA Mariner 1 45 -35 12666 175 51 24 chr2 2667846 2668121 -250588462 + L1P2 LINE L1 4660 4926 -1228 3403 46 0 5 chr2 2668121 2668538 -250588045 - L1PA5 LINE L1 -2 6152 5738 12666 175 51 24 chr2 2668538 2669132 -250587451 + L1PA5 LINE L1 4926 5733 -421 3230 147 28 9 chr2 2669110 2669887 -250586696 + L1PB4 LINE L1 4988 5775 -381 * 297 0 0 0 chr2 2669887 2669920 -250586663 + (TA)n Simple_repeat Simple_repeat 2 34 0 1392 158 41 142 chr2 2670234 2670330 -250586253 + L1PB4 LINE L1 5782 5886 -270 326 89 0 0 chr2 2670330 2670375 -250586208 + MADE1 DNA Mariner 35 79 -1 1392 158 41 142 chr2 2670375 2670651 -250585932 + L1PB4 LINE L1 5886 6156 0 2813 152 16 4 chr2 2670693 2671550 -250585033 + L1P4 LINE L1 4828 5692 -473 1729 175 10 0 chr2 2671553 2671845 -250584738 + AluJb SINE Alu 1 295 -17 210 267 0 0 chr2 2672335 2672380 -250584203 + (TATG)n Simple_repeat Simple_repeat 1 45 0 345 253 114 98 chr2 2673408 2673468 -250583115 + L1MEc LINE L1 1689 1747 -4974 2484 59 3 7 chr2 2673468 2673772 -250582811 + AluY SINE Alu 1 303 -8 345 253 114 98 chr2 2673772 2674098 -250582485 + L1MEc LINE L1 1747 2081 -4640 2052 200 42 9 chr2 2674133 2674563 -250582020 + LTR56 LTR ERV1 1 444 -1 385 307 111 42 chr2 2674810 2675200 -250581383 + L1MEc LINE L1 2345 2804 -3917 51 65 0 0 chr2 2675911 2676004 -250580579 + AT_rich Low_complexity Low_complexity 1 93 0 21 57 0 0 chr2 2676253 2676288 -250580295 + AT_rich Low_complexity Low_complexity 1 35 0 251 280 40 0 chr2 2676380 2676455 -250580128 + Tigger6 DNA MER2_type 1 78 -1519 264 242 0 77 chr2 2678146 2678237 -250578346 - L1MC4 LINE L1 -1341 6701 6618 1166 128 6 17 chr2 2678260 2678440 -250578143 + AluSg/x SINE Alu 135 312 0 2330 86 0 10 chr2 2678753 2679055 -250577528 - AluY SINE Alu -12 299 1 42 65 0 0 chr2 2679238 2679315 -250577268 + AT_rich Low_complexity Low_complexity 1 77 0 185 164 0 36 chr2 2680138 2680193 -250576390 + (TTA)n Simple_repeat Simple_repeat 2 54 0 200 264 83 0 chr2 2680850 2680922 -250575661 + MIR SINE MIR 127 204 -58 2208 141 141 5 chr2 2681007 2681383 -250575200 - MSTA LTR MaLR 0 428 2 1530 274 86 89 chr2 2681437 2683119 -250573464 - HAL1 LINE L1 0 2507 830 309 169 0 0 chr2 2683130 2683189 -250573394 + (TCCA)n Simple_repeat Simple_repeat 2 60 0 1955 184 46 90 chr2 2683189 2683689 -250572894 + MLT2B1 LTR ERVL 2 479 -41 218 202 40 40 chr2 2683689 2683786 -250572797 + (TA)n Simple_repeat Simple_repeat 2 101 -24 1326 168 26 17 chr2 2683786 2684018 -250572565 - MER46A DNA MER2_type 0 236 3 218 202 40 40 chr2 2684018 2684044 -250572539 + (TA)n Simple_repeat Simple_repeat 100 125 0 1401 59 0 0 chr2 2684097 2684267 -250572316 + LTR9 LTR ERV1 3 172 -440 340 229 0 62 chr2 2684269 2684365 -250572218 + L1MC4 LINE L1 6614 6703 -1339 469 184 0 15 chr2 2684370 2684506 -250572077 + (TA)n Simple_repeat Simple_repeat 2 135 0 247 269 0 21 chr2 2684507 2684600 -250571983 + L1MC4 LINE L1 6613 6703 -1339 345 198 0 0 chr2 2684602 2684688 -250571895 + (TA)n Simple_repeat Simple_repeat 2 87 0 241 194 45 0 chr2 2684691 2684758 -250571825 + L1MCa LINE L1 1994 2063 -4363 233 238 71 12 chr2 2684785 2684869 -250571714 - L1MC4 LINE L1 -1333 6709 6621 217 214 0 0 chr2 2684880 2684956 -250571627 + (TG)n Simple_repeat Simple_repeat 1 76 0 260 61 0 0 chr2 2684966 2684999 -250571584 + MLT2C1 LTR ERVL 360 392 -5 224 167 21 0 chr2 2685008 2685056 -250571527 + (TCTA)n Simple_repeat Simple_repeat 1 49 0 3762 149 28 12 chr2 2685177 2685779 -250570804 - LTR9 LTR ERV1 0 612 1 244 273 79 43 chr2 2686202 2686341 -250570242 - HAL1 LINE L1 -2363 144 1 2060 121 0 23 chr2 2686716 2687022 -250569561 - AluSx SINE Alu -13 299 1 244 294 98 21 chr2 2688018 2688161 -250568422 - MER103 DNA DNA -2 164 11 207 333 23 0 chr2 2688390 2688477 -250568106 + CT-rich Low_complexity Low_complexity 2 90 0 2032 123 13 13 chr2 2688628 2688938 -250567645 + L1PA13 LINE L1 5546 5855 -308 1328 229 14 8 chr2 2688926 2689297 -250567286 + L1MCa LINE L1 3104 3476 -2950 * 5182 133 3 1 chr2 2689296 2690701 -250565882 + L1PA12 LINE L1 4577 5984 -184 2095 170 25 0 chr2 2690701 2691065 -250565518 - L1M4 LINE L1 -483 5701 5329 1435 73 28 0 chr2 2691071 2691249 -250565334 + L1PA12 LINE L1 5985 6167 -1 2836 92 20 52 chr2 2691315 2691759 -250564824 - L1PB1 LINE L1 -3 6148 5719 3849 197 33 19 chr2 2691870 2692883 -250563700 + L1MB7 LINE L1 5102 6126 -58 1176 247 42 3 chr2 2692897 2693209 -250563374 - L1MA9 LINE L1 -38 6274 5951 2786 175 7 2 chr2 2693217 2693663 -250562920 - L1PA16 LINE L1 -4 6162 5715 616 259 114 71 chr2 2693862 2694484 -250562099 + L1M4 LINE L1 3681 4329 -1817 422 257 84 48 chr2 2694537 2694786 -250561797 + L1MC4 LINE L1 6914 7171 -871 1134 237 3 61 chr2 2694797 2695109 -250561474 + L1MA5 LINE L1 1 294 -6915 306 325 9 0 chr2 2696056 2696170 -250560413 - MER94 DNA DNA -19 115 1 233 271 76 34 chr2 2696509 2696627 -250559956 + MIR SINE MIR 106 228 -34 335 193 0 0 chr2 2697679 2697736 -250558847 - L2 LINE L2 -9 3304 3248 414 296 0 7 chr2 2698121 2698424 -250558159 + (CA)n Simple_repeat Simple_repeat 1 300 0 437 328 0 11 chr2 2698437 2698614 -250557969 + (CA)n Simple_repeat Simple_repeat 1 175 0 10308 204 34 60 chr2 2699445 2700895 -250555688 + L1MA5 LINE L1 390 1877 -5485 2179 123 6 25 chr2 2700895 2701213 -250555370 - AluSx SINE Alu 0 312 1 10308 204 34 60 chr2 2701213 2704958 -250551625 + L1MA5 LINE L1 1877 5720 -1642 481 50 0 200 chr2 2704958 2705058 -250551525 - MADE1 DNA Mariner 0 80 1 10308 204 34 60 chr2 2705058 2706017 -250550566 + L1MA5 LINE L1 5720 7113 -249 286 51 26 0 chr2 2706017 2706056 -250550527 + MADE1 DNA Mariner 1 40 -40 10308 204 34 60 chr2 2706056 2706152 -250550431 + L1MA5 LINE L1 7113 7210 -152 4971 62 8 8 chr2 2706154 2706765 -250549818 - L1PA7 LINE L1 -1 6153 5543 967 172 0 0 chr2 2706765 2706933 -250549650 + L1MA5 LINE L1 7194 7362 0 721 412 71 10 chr2 2706934 2707444 -250549139 + L1MC4a LINE L1 7116 7607 -201 272 303 107 8 chr2 2707625 2707747 -250548836 - MIR SINE MIR -37 225 92 562 211 45 39 chr2 2708007 2708163 -250548420 + MLT1D LTR MaLR 14 170 -335 1036 153 178 4 chr2 2708533 2708613 -250547970 - L1MC2 LINE L1 -11 6333 6268 180 0 0 0 chr2 2708613 2708633 -250547950 + (CA)n Simple_repeat Simple_repeat 1 20 0 1036 153 178 4 chr2 2708633 2708788 -250547795 - L1MC2 LINE L1 -76 6268 6057 2069 125 7 3 chr2 2708801 2709090 -250547493 - AluSx SINE Alu -21 291 2 2438 187 17 15 chr2 2713570 2714031 -250542552 + MLT1C LTR MaLR 6 467 0 403 57 19 0 chr2 2714621 2714674 -250541909 - L1PA6 LINE L1 -5 6149 6096 3233 35 0 0 chr2 2714674 2715260 -250541323 + L1P2 LINE L1 4999 5584 -570 635 250 95 20 chr2 2715261 2715461 -250541122 - MIR SINE MIR -39 223 9 1984 142 14 3 chr2 2715614 2715909 -250540674 - AluSx SINE Alu -14 298 1 190 344 73 21 chr2 2716200 2716296 -250540287 - L2 LINE L2 -6 3307 3207 * 432 298 116 30 chr2 2716293 2716491 -250540092 + MIR SINE MIR 5 219 -43 5030 215 66 25 chr2 2716517 2718274 -250538309 + L1MDa LINE L1 21 2004 -4536 1550 77 9 18 chr2 2718273 2718495 -250538088 + L1P LINE L1 1 220 -5926 * 192 191 95 0 chr2 2920312 2920375 -250336208 + L2 LINE L2 3238 3306 -7 2714 37 0 0 chr2 2921639 2921937 -250334646 - AluY SINE Alu -13 298 1 305 203 40 0 chr2 2921938 2922012 -250334571 - MER69 DNA AcHobo -2370 156 80 27 0 0 0 chr2 2922478 2922505 -250334078 + AT_rich Low_complexity Low_complexity 1 27 0 624 168 19 0 chr2 2923023 2923130 -250333453 - FLAM_C SINE Alu -33 110 2 382 298 21 47 chr2 2923778 2923969 -250332614 + MER3 DNA MER1_type 24 209 0 313 323 168 0 chr2 2923986 2924141 -250332442 + MER5A DNA MER1_type 6 186 -3 189 306 72 39 chr2 2925821 2926001 -250330582 + L2 LINE L2 3083 3268 -4 * 202 289 0 19 chr2 2925991 2926043 -250330540 + MER5A DNA MER1_type 137 187 -2 1335 220 18 23 chr2 2927217 2927577 -250329006 - MLT1F LTR MaLR -81 461 15 437 335 24 0 chr2 2927594 2927758 -250328825 - MLT1F LTR MaLR -365 177 10 190 288 0 30 chr2 2927853 2927919 -250328664 - L2 LINE L2 -10 3262 3199 323 294 122 25 chr2 2928153 2928596 -250327987 - MLT1E LTR MaLR 0 593 35 1011 149 0 0 chr2 2928718 2928859 -250327724 - FRAM SINE Alu -17 159 19 356 321 26 75 chr2 2928983 2929070 -250327513 - L2 LINE L2 -61 3252 3162 2410 75 0 0 chr2 2929070 2929352 -250327231 - AluSp SINE Alu -23 290 9 356 321 26 75 chr2 2929352 2929613 -250326970 - L2 LINE L2 -151 3162 2921 2459 97 0 0 chr2 2929862 2930171 -250326412 - AluSx SINE Alu -3 309 1 2329 102 0 16 chr2 2930350 2930487 -250326096 + AluSx SINE Alu 1 139 -173 2248 98 0 29 chr2 2930487 2930794 -250325789 + AluSg SINE Alu 1 298 -12 2329 102 0 16 chr2 2930794 2930969 -250325614 + AluSx SINE Alu 139 308 -4 498 289 165 14 chr2 2930976 2931340 -250325243 - L2 LINE L2 -770 2544 2126 927 154 46 6 chr2 2931815 2931990 -250324593 - MER20 DNA MER1_type -1 218 37 907 225 79 48 chr2 2932086 2932441 -250324142 + MER69 DNA AcHobo 1919 2284 -242 2327 98 3 13 chr2 2932448 2932755 -250323828 + AluY SINE Alu 1 304 -7 3246 226 66 19 chr2 2932799 2933319 -250323264 - L1MD1 LINE L1 0 6242 5748 1272 97 111 0 chr2 2933319 2933526 -250323057 - MER30 DNA MER1_type 0 230 1 3246 226 66 19 chr2 2933526 2933650 -250322933 - L1MD1 LINE L1 -494 5748 5631 2299 104 3 3 chr2 2933650 2933959 -250322624 - AluSc SINE Alu 0 309 1 3246 226 66 19 chr2 2933959 2934701 -250321882 - L1MD1 LINE L1 -611 5631 4789 2400 103 0 3 chr2 2935024 2935335 -250321248 - AluSq SINE Alu -3 310 1 764 173 0 0 chr2 2936127 2936260 -250320323 + FLAM_C SINE Alu 1 133 0 1916 176 0 3 chr2 2936944 2937122 -250319461 - AluJo SINE Alu 0 312 134 2441 92 0 0 chr2 2937122 2937416 -250319167 - AluSq SINE Alu -19 294 1 1916 176 0 3 chr2 2937416 2937550 -250319033 - AluJo SINE Alu -178 134 1 368 273 54 81 chr2 2938407 2938667 -250317916 - HAL1 LINE L1 -953 1554 1302 381 248 0 0 chr2 2939592 2939705 -250316878 + (CA)n Simple_repeat Simple_repeat 1 113 0 189 0 0 0 chr2 2939931 2939952 -250316631 + (TTTC)n Simple_repeat Simple_repeat 2 22 0 182 318 0 0 chr2 2940691 2940754 -250315829 - MIR SINE MIR -136 126 64 251 290 131 42 chr2 2940793 2940993 -250315590 + L1MC/D LINE L1 5600 5830 -1978 1918 155 17 3 chr2 2940993 2941289 -250315294 + AluJo SINE Alu 1 300 -12 251 290 131 42 chr2 2941289 2941347 -250315236 + L1MC/D LINE L1 5830 5881 -1927 197 231 0 15 chr2 2941466 2941531 -250315052 + (CATATA)n Simple_repeat Simple_repeat 1 64 0 1138 215 53 45 chr2 2941687 2942045 -250314538 - MLT1A1 LTR MaLR -4 361 1 1395 127 143 20 chr2 2942178 2942430 -250314153 - AluJo SINE Alu -29 283 1 2449 100 0 0 chr2 2942662 2942971 -250313612 - AluSx SINE Alu -3 309 1 224 276 188 33 chr2 2943366 2943547 -250313036 - MIR SINE MIR -16 246 38 197 292 156 0 chr2 2944762 2944858 -250311725 - MIR SINE MIR -79 183 73 272 252 44 74 chr2 2945396 2945531 -250311052 - MIR SINE MIR -62 146 16 1089 0 0 0 chr2 2946358 2946479 -250310104 + (CA)n Simple_repeat Simple_repeat 1 121 0 183 42 0 0 chr2 2946479 2946503 -250310080 + (CCCA)n Simple_repeat Simple_repeat 1 24 0 2325 208 60 19 chr2 2947839 2948259 -250308324 + MER6A DNA MER2_type -10 439 -426 2698 40 0 0 chr2 2948259 2948559 -250308024 + AluY SINE Alu 1 300 -11 2325 208 60 19 chr2 2948559 2948712 -250307871 + MER6A DNA MER2_type 439 584 -21 312 333 32 0 chr2 2948853 2948976 -250307607 - MIR SINE MIR -53 209 83 225 65 0 0 chr2 2950466 2950497 -250306086 + (TG)n Simple_repeat Simple_repeat 1 31 0 1459 205 59 38 chr2 2951358 2951890 -250304693 - LTR40a LTR ERVL 0 519 31 640 268 168 31 chr2 2952044 2952165 -250304418 + MLT1F1 LTR MaLR 1 104 -463 1679 180 40 30 chr2 2952165 2952593 -250303990 + MSTB1 LTR MaLR 1 432 0 640 268 168 31 chr2 2952593 2952959 -250303624 + MLT1F1 LTR MaLR 104 567 0 716 144 34 0 chr2 2952960 2953078 -250303505 + FLAM_A SINE Alu 1 122 -11 1985 155 0 29 chr2 2954635 2954945 -250301638 + AluJb SINE Alu 1 301 -11 2053 172 46 0 chr2 2956065 2956478 -250300105 + MSTB1 LTR MaLR 1 432 0 1899 198 96 24 chr2 2956551 2957062 -250299521 - LTR10A LTR ERV1 -61 548 1 232 263 95 73 chr2 2957093 2957230 -250299353 + MIR SINE MIR 14 153 -109 1032 278 89 47 chr2 2957801 2958399 -250298184 - MLT1E2 LTR MaLR 0 626 4 376 219 42 25 chr2 2958634 2958753 -250297830 - L1MA4A LINE L1 -1 6302 6182 626 233 8 0 chr2 2958789 2958922 -250297661 + MER58 DNA MER1_type 116 249 -92 3793 96 28 7 chr2 2959081 2959644 -250296939 + L1PA11 LINE L1 5600 6174 0 690 254 79 0 chr2 2959883 2960060 -250296523 + MER3 DNA MER1_type 3 193 -16 1973 167 3 3 chr2 2960650 2960955 -250295628 + AluJo SINE Alu 1 305 -7 23 33 0 0 chr2 2961059 2961089 -250295494 + AT_rich Low_complexity Low_complexity 1 30 0 3944 73 15 0 chr2 2961357 2961902 -250294681 - L1PA10 LINE L1 0 6168 5616 1259 267 44 16 chr2 2963353 2963784 -250292799 - LTR47B LTR ERVL 0 443 1 757 221 79 73 chr2 2964767 2965084 -250291499 + MER5C DNA MER1_type 5 323 -1 2524 32 0 0 chr2 2965368 2965677 -250290906 - AluY SINE Alu 0 310 2 3712 199 50 1 chr2 2966242 2966606 -250289977 - L1MB8 LINE L1 0 6178 5833 1265 125 83 5 chr2 2966606 2966822 -250289761 + MER46A DNA MER2_type 2 234 -2 3712 199 50 1 chr2 2966822 2967275 -250289308 - L1MB8 LINE L1 -345 5833 5320 2497 58 52 14 chr2 2967282 2967644 -250288939 - L1PB1 LINE L1 -7 7563 7188 730 93 0 19 chr2 2967660 2967768 -250288815 - L1MA2 LINE L1 -9 6295 6190 10321 156 34 21 chr2 2967770 2968109 -250288474 - L1PB1 LINE L1 -502 7217 6884 1244 124 180 141 chr2 2968109 2968520 -250288063 - MSTA LTR MaLR -1 427 1 10321 156 34 21 chr2 2968520 2970625 -250285958 - L1PB1 LINE L1 -835 6884 4738 5026 193 47 6 chr2 2971915 2973131 -250283452 - L1PB1 LINE L1 -2826 4739 3462 210 71 0 0 chr2 2973131 2973159 -250283424 + (CCCCCT)n Simple_repeat Simple_repeat 3 30 0 3676 71 4 21 chr2 2973264 2973824 -250282759 - SVA Other Other -835 551 2 3978 249 30 34 chr2 2973868 2974070 -250282513 - L1M4 LINE L1 -1426 4720 4519 1754 153 27 10 chr2 2974070 2974371 -250282212 - AluJb SINE Alu -4 308 3 3978 249 30 34 chr2 2974371 2974587 -250281996 - L1M4 LINE L1 -1627 4519 4304 2078 128 0 0 chr2 2974587 2974893 -250281690 - AluSx SINE Alu -6 306 1 3978 249 30 34 chr2 2974893 2975828 -250280755 - L1M4 LINE L1 -1842 4304 3371 609 165 75 75 chr2 2975852 2976064 -250280519 + MER69 DNA AcHobo 2312 2523 -3 1976 120 7 7 chr2 2977866 2978165 -250278418 - AluSx SINE Alu -13 299 1 270 141 0 179 chr2 2979409 2979434 -250277149 - MER45A DNA AcHobo -1447 134 106 2137 111 0 0 chr2 2979434 2979764 -250276819 - AluSq SINE Alu 0 313 1 270 141 0 179 chr2 2979764 2979816 -250276767 - MER45A DNA AcHobo -1475 106 71 260 319 43 49 chr2 2980562 2980725 -250275858 + MIR3 SINE MIR 6 167 -41 211 315 194 6 chr2 2981028 2981193 -250275390 - MIR SINE MIR -12 250 55 2212 95 0 0 chr2 2981482 2981786 -250274797 + AluY SINE Alu 1 304 -7 1501 163 4 4 chr2 2981801 2982059 -250274524 + AluJb SINE Alu 1 258 -54 356 182 71 50 chr2 2982340 2982439 -250274144 + L1MC5 LINE L1 7831 7931 -30 1705 159 27 3 chr2 2982820 2983115 -250273468 - AluJb SINE Alu -3 309 8 510 305 121 18 chr2 2983780 2984177 -250272406 + L2 LINE L2 2264 2701 -613 242 0 61 0 chr2 2984443 2984476 -250272107 + (TCTG)n Simple_repeat Simple_repeat 2 36 0 281 273 39 0 chr2 2984501 2984578 -250272005 + L2 LINE L2 3232 3311 -2 211 204 0 56 chr2 2984738 2984792 -250271791 + CT-rich Low_complexity Low_complexity 6 56 0 2009 130 7 0 chr2 2984837 2985144 -250271439 - AluSx SINE Alu -3 309 1 324 284 39 0 chr2 2986097 2986199 -250270384 + MIR3 SINE MIR 96 201 -7 222 246 0 31 chr2 2986325 2986390 -250270193 - MIR SINE MIR -119 143 81 29 0 0 0 chr2 2986419 2986448 -250270135 + AT_rich Low_complexity Low_complexity 1 29 0 329 129 86 0 chr2 2986668 2986738 -250269845 - MER45A DNA AcHobo -22 156 81 219 293 7 30 chr2 2986824 2987112 -250269471 + G-rich Low_complexity Low_complexity 1 281 0 326 303 66 9 chr2 2987467 2987678 -250268905 - L1MEd LINE L1 -5306 813 591 24 67 0 0 chr2 2988975 2989020 -250267563 + AT_rich Low_complexity Low_complexity 1 45 0 237 178 0 0 chr2 2989113 2989158 -250267425 + (TG)n Simple_repeat Simple_repeat 2 46 0 345 270 72 18 chr2 2989399 2989510 -250267073 + MIR SINE MIR 28 144 -118 453 296 35 7 chr2 2990059 2990201 -250266382 + Charlie8 DNA MER1_type 25 170 -2247 191 329 114 27 chr2 2990714 2990863 -250265720 + MIR3 SINE MIR 15 176 -32 417 213 150 8 chr2 2991831 2991958 -250264625 + MIR SINE MIR 97 241 -21 199 365 12 0 chr2 2992421 2992506 -250264077 - MIR3 SINE MIR -18 190 105 412 54 36 0 chr2 2992716 2992772 -250263811 + L1P4 LINE L1 5423 5480 -688 2389 101 18 3 chr2 2992782 2993120 -250263463 - L1PA11 LINE L1 -2 6172 5830 3435 121 107 10 chr2 2993120 2993703 -250262880 - L1PA16 LINE L1 -67 6099 5460 3087 79 2 7 chr2 2993702 2994118 -250262465 + L1PA11 LINE L1 5467 5880 -294 * 279 270 149 29 chr2 2994201 2994375 -250262208 - L1ME LINE L1 -299 5822 5628 1419 142 130 15 chr2 2994970 2995231 -250261352 + AluJo SINE Alu 1 291 -21 188 330 66 22 chr2 2995589 2995680 -250260903 - MIR SINE MIR -65 143 49 295 280 0 30 chr2 2996213 2996313 -250260270 + L1ME LINE L1 5691 5787 -334 259 229 76 69 chr2 2996326 2996457 -250260126 + MIR SINE MIR 131 262 0 345 271 83 57 chr2 2997521 2997872 -250258711 - L1ME4a LINE L1 -21 6100 5741 271 295 54 0 chr2 2997877 2997989 -250258594 - L1ME4a LINE L1 -525 5596 5479 303 28 0 0 chr2 2998163 2998199 -250258384 + (TCCA)n Simple_repeat Simple_repeat 1 36 0 725 266 203 16 chr2 2998309 2998625 -250257958 - L2 LINE L2 -5 3308 2934 296 278 0 0 chr2 2998697 2998769 -250257814 - L2 LINE L2 -681 2633 2562 849 276 167 13 chr2 2998770 2999310 -250257273 - L2 LINE L2 -1123 2191 1569 1205 167 32 17 chr2 2999324 2999567 -250257016 - L1MB7 LINE L1 -218 5966 5721 604 355 108 33 chr2 2999608 3000770 -250255813 + L2 LINE L2 2005 3272 0 4590 192 43 24 chr2 3000921 3001600 -250254983 - L1M1 LINE L1 -4065 1263 599 1799 156 0 32 chr2 3001600 3001908 -250254675 - AluJb SINE Alu -14 298 1 4590 192 43 24 chr2 3001908 3002612 -250253971 - L1M1 LINE L1 -4729 599 727 1445 132 32 0 chr2 3002612 3002832 -250253751 + MER30 DNA MER1_type 3 229 -1 4590 192 43 24 chr2 3002832 3003141 -250253442 - L1M1 LINE L1 -4600 728 426 597 292 85 30 chr2 3003132 3003368 -250253215 - L1M4b LINE L1 -6296 563 315 * 857 197 82 52 chr2 3003391 3003624 -250252959 - L1M4b LINE L1 -6610 249 10 342 313 17 17 chr2 3003902 3004017 -250252566 + L2 LINE L2 3188 3302 -11 205 277 43 0 chr2 3004025 3004072 -250252511 - L2 LINE L2 -87 3185 3137 2051 85 0 11 chr2 3004083 3004364 -250252219 + AluSq SINE Alu 36 313 0 22 56 0 0 chr2 3005159 3005195 -250251388 + AT_rich Low_complexity Low_complexity 1 36 0 541 271 76 89 chr2 3005514 3005961 -250250622 - L2 LINE L2 -2 3311 2871 468 51 0 0 chr2 3007955 3008014 -250248569 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 2047 112 3 0 chr2 3008014 3008310 -250248273 - AluSx SINE Alu -15 297 1 2104 99 7 3 chr2 3008314 3008608 -250247975 - AluSx SINE Alu -17 295 1 1240 244 141 74 chr2 3008959 3009094 -250247489 - Charlie7 DNA MER1_type -1751 861 736 694 47 0 0 chr2 3009094 3009203 -250247380 - L1PA4 LINE L1 0 6155 6059 1240 244 141 74 chr2 3009203 3009367 -250247216 - Charlie7 DNA MER1_type -1876 736 584 5546 118 8 4 chr2 3009367 3010629 -250245954 - L1PA15 LINE L1 -2 6163 4868 1240 244 141 74 chr2 3010629 3011135 -250245448 - Charlie7 DNA MER1_type -2028 584 1 213 43 0 65 chr2 3013920 3013966 -250242617 + (TCCCG)n Simple_repeat Simple_repeat 2 44 0 678 141 70 8 chr2 3014481 3014606 -250241977 - LTR12 LTR ERV1 -10 2428 363 591 211 0 23 chr2 3014606 3014739 -250241844 - pTR5 LTR ERV1 -910 1528 1399 282 211 0 0 chr2 3014743 3014795 -250241788 - LTR30 LTR ERV1 -670 52 1 2169 94 3 3 chr2 3014838 3015136 -250241447 - AluY SINE Alu -13 298 1 712 226 26 0 chr2 3016386 3016541 -250240042 - L1M4 LINE L1 -2229 3917 3759 1526 221 52 13 chr2 3016561 3017019 -250239564 - L1M4 LINE L1 -2545 3601 3126 453 182 65 0 chr2 3017338 3017415 -250239168 + THE1B LTR MaLR 1 82 -282 2209 114 9 24 chr2 3017421 3017753 -250238830 + THE1B LTR MaLR 38 364 0 735 259 45 53 chr2 3017762 3018005 -250238578 - MIR SINE MIR -17 245 5 276 335 180 0 chr2 3018066 3018227 -250238356 + MIR SINE MIR 58 247 -15 518 302 124 24 chr2 3018887 3019679 -250236904 - L2 LINE L2 0 3272 2325 195 125 0 0 chr2 3019711 3019751 -250236832 + (TG)n Simple_repeat Simple_repeat 1 40 0 355 324 45 73 chr2 3019768 3020018 -250236565 - MIR SINE MIR -17 245 4 196 268 110 39 chr2 3023485 3023612 -250232971 + MIR SINE MIR 51 186 -76 195 278 130 19 chr2 3024670 3024778 -250231805 + MIR SINE MIR 16 135 -127 1564 196 43 3 chr2 3025107 3025688 -250230895 - MER67B LTR ERV1 -1 660 10 814 181 0 0 chr2 3025916 3026049 -250230534 + FLAM_C SINE Alu 1 133 0 3109 109 17 11 chr2 3026164 3026632 -250229951 - LTR3b LTR ERVK -29 471 1 21 36 0 0 chr2 3028169 3028197 -250228386 + AT_rich Low_complexity Low_complexity 1 28 0 1670 199 28 25 chr2 3029236 3029593 -250226990 - MLT1A1 LTR MaLR -7 358 1 31 26 0 0 chr2 3030974 3031012 -250225571 + AT_rich Low_complexity Low_complexity 1 38 0 1847 55 13 0 chr2 3031012 3031248 -250225335 - L1PA4 LINE L1 0 6155 5917 240 175 0 0 chr2 3032475 3032515 -250224068 - MER67B LTR ERV1 -621 40 1 266 196 228 22 chr2 3032848 3032940 -250223643 - L2 LINE L2 -19 3253 3143 207 379 48 0 chr2 3033368 3033471 -250223112 + MIR SINE MIR 81 188 -74 31 0 0 0 chr2 3033809 3033840 -250222743 + AT_rich Low_complexity Low_complexity 1 31 0 261 0 0 0 chr2 3034290 3034319 -250222264 + (A)n Simple_repeat Simple_repeat 1 29 0 4387 118 57 50 chr2 3035006 3035783 -250220800 + LTR1 LTR ERV1 1 782 -3 691 262 92 18 chr2 3035866 3036202 -250220381 - L1ME4a LINE L1 -251 5870 5510 953 109 0 7 chr2 3037214 3037352 -250219231 + LTR1 LTR ERV1 648 784 -1 224 219 0 0 chr2 3037435 3037476 -250219107 + (CA)n Simple_repeat Simple_repeat 1 41 0 317 222 152 30 chr2 3037981 3038080 -250218503 - L2 LINE L2 0 3313 3203 510 294 123 11 chr2 3038288 3038475 -250218108 + MIR SINE MIR 55 262 0 2909 242 18 5 chr2 3038773 3039532 -250217051 + L1 LINE L1 2258 3026 -3120 1667 61 0 5 chr2 3039533 3039731 -250216852 + AluSq SINE Alu 1 197 -116 218 288 88 25 chr2 3039799 3039959 -250216624 - L2 LINE L2 -2007 1307 1138 213 39 0 0 chr2 3040729 3040755 -250215828 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1948 146 0 0 chr2 3040757 3041032 -250215551 - AluSx SINE Alu -37 275 1 1083 166 50 15 chr2 3041474 3041673 -250214910 - AluJo SINE Alu -20 292 87 199 254 15 75 chr2 3042347 3042414 -250214169 - L2 LINE L2 -24 3289 3227 461 337 151 12 chr2 3043454 3043798 -250212785 - L2 LINE L2 -1 3312 2921 423 302 137 42 chr2 3043859 3044479 -250212104 - L2 LINE L2 -508 2806 2128 194 383 0 12 chr2 3044506 3044587 -250211996 + L2 LINE L2 3108 3187 -85 826 333 87 60 chr2 3046083 3046903 -250209680 - HAL1 LINE L1 -726 1781 940 342 327 64 0 chr2 3047228 3047384 -250209199 + MER5A DNA MER1_type 1 166 -23 250 303 0 11 chr2 3050808 3050986 -250205597 + (TG)n Simple_repeat Simple_repeat 1 176 0 309 333 20 0 chr2 3051001 3051100 -250205483 + (CATG)n Simple_repeat Simple_repeat 4 104 0 269 211 0 0 chr2 3051103 3051160 -250205423 + MER4-int LTR ERV1 1111 1167 -5431 302 264 73 0 chr2 3051160 3051270 -250205313 + (CATG)n Simple_repeat Simple_repeat 1 118 0 374 232 17 22 chr2 3051274 3051455 -250205128 + (TATG)n Simple_repeat Simple_repeat 1 180 0 308 287 0 11 chr2 3051477 3051658 -250204925 + (TATG)n Simple_repeat Simple_repeat 2 180 0 267 260 0 0 chr2 3051747 3051843 -250204740 + (TG)n Simple_repeat Simple_repeat 1 96 0 459 369 56 13 chr2 3052191 3052424 -250204159 + L2 LINE L2 997 1239 -2075 363 250 20 66 chr2 3052424 3052576 -250204007 - L1 LINE L1 -2342 3804 3660 1040 306 85 5 chr2 3053935 3054357 -250202226 + HsTC2 DNA Tc2 1 456 -1442 896 264 25 16 chr2 3054907 3055225 -250201358 + HsTC2 DNA Tc2 1573 1893 -5 4641 47 2 0 chr2 3056045 3056601 -250199982 + L1PA8 LINE L1 5612 6168 -4 216 97 0 0 chr2 3057119 3057150 -250199433 + (TG)n Simple_repeat Simple_repeat 1 31 0 2118 151 87 25 chr2 3058126 3058529 -250198054 - MSTA LTR MaLR 0 428 1 799 109 8 8 chr2 3060312 3060431 -250196152 + THE1B LTR MaLR 246 364 0 995 201 99 48 chr2 3060467 3060781 -250195802 + L1MC4 LINE L1 7543 7872 -170 182 231 0 0 chr2 3060977 3061016 -250195567 - L2 LINE L2 -1 3271 3233 577 240 35 85 chr2 3061377 3061635 -250194948 - L2 LINE L2 -5 3308 3064 393 102 0 0 chr2 3062020 3062079 -250194504 + (CA)n Simple_repeat Simple_repeat 1 59 0 989 213 262 0 chr2 3062603 3062931 -250193652 + MER47B DNA MER2_type 1 414 -4 2131 146 0 0 chr2 3064316 3064618 -250191965 - AluSx SINE Alu -10 302 1 388 311 43 25 chr2 3065392 3065553 -250191030 + L2 LINE L2 3103 3266 -6 29 60 0 0 chr2 3069033 3069083 -250187500 + AT_rich Low_complexity Low_complexity 1 50 0 375 314 65 40 chr2 3070016 3070264 -250186319 - MLT1L LTR MaLR 0 615 362 2190 120 10 3 chr2 3070508 3070809 -250185774 - AluSq SINE Alu -10 303 1 350 281 105 91 chr2 3070859 3071772 -250184811 - L1M2 LINE L1 -5584 1265 340 619 343 111 54 chr2 3071813 3073272 -250183311 + L2 LINE L2 1472 3272 0 303 304 112 31 chr2 3073622 3073783 -250182800 + MLT1I LTR MaLR 37 210 -199 213 337 174 0 chr2 3077157 3077243 -250179340 + L2 LINE L2 3158 3258 -14 1618 185 16 33 chr2 3077367 3077670 -250178913 + AluJo SINE Alu 4 301 -11 481 290 36 36 chr2 3077744 3077937 -250178646 - L1MB3 LINE L1 -9 6174 5982 2396 97 0 3 chr2 3078255 3078565 -250178018 - AluY SINE Alu -2 309 1 192 135 0 0 chr2 3079002 3079039 -250177544 + (GGGAGA)n Simple_repeat Simple_repeat 4 40 0 491 273 145 12 chr2 3079646 3079935 -250176648 + L1MC4a LINE L1 5145 5467 -743 22 80 0 0 chr2 3080195 3080245 -250176338 + AT_rich Low_complexity Low_complexity 1 50 0 201 121 0 0 chr2 3080255 3080288 -250176295 + (GGGAGA)n Simple_repeat Simple_repeat 4 36 0 29 47 0 0 chr2 3080343 3080386 -250176197 + AT_rich Low_complexity Low_complexity 1 43 0 388 265 34 34 chr2 3080395 3080599 -250175984 + L1MC4a LINE L1 5729 5932 -1876 193 262 164 0 chr2 3082574 3082635 -250173948 + MIR SINE MIR 127 197 -65 252 305 24 98 chr2 3082680 3082844 -250173739 + MIR SINE MIR 110 261 -1 1603 123 36 36 chr2 3082894 3083147 -250173436 - AluSx SINE Alu 0 312 60 304 296 15 67 chr2 3083151 3083286 -250173297 - L1MB3 LINE L1 -266 5855 5728 1274 247 51 0 chr2 3083638 3084030 -250172553 + HAL1 LINE L1 1296 1707 -800 9767 39 1 183 chr2 3084031 3085745 -250170838 - SVA Other Other 0 1386 2 1408 192 25 0 chr2 3085775 3086061 -250170522 - L1MA9 LINE L1 -427 5949 5657 21 82 0 0 chr2 3086067 3086116 -250170467 + AT_rich Low_complexity Low_complexity 1 49 0 13125 199 42 67 chr2 3086692 3088563 -250168020 - L1MA9 LINE L1 -708 5668 3752 2390 89 0 0 chr2 3088563 3088855 -250167728 - AluSx SINE Alu -20 292 1 13125 199 42 67 chr2 3088855 3090826 -250165757 - L1MA9 LINE L1 -2624 3752 1733 2318 95 27 0 chr2 3090826 3091121 -250165462 + AluSg SINE Alu 1 303 -7 892 163 106 0 chr2 3091124 3091284 -250165299 + AluJo/FRAM SINE Alu 133 309 -3 13125 199 42 67 chr2 3091284 3091394 -250165189 - L1MA9 LINE L1 -4645 1731 1620 1980 171 89 30 chr2 3091394 3091798 -250164785 + MSTC LTR MaLR 1 428 0 13125 199 42 67 chr2 3091798 3093784 -250162799 - L1MA9 LINE L1 -4756 1620 1 2308 120 0 16 chr2 3094544 3094861 -250161722 - AluSq SINE Alu 0 313 2 281 293 15 108 chr2 3095203 3095478 -250161105 + MIR3 SINE MIR 12 262 0 217 228 0 63 chr2 3098441 3098599 -250157984 + (TATG)n Simple_repeat Simple_repeat 4 151 0 242 191 43 17 chr2 3098757 3098872 -250157711 + (TATG)n Simple_repeat Simple_repeat 3 120 0 188 256 12 0 chr2 3098890 3098976 -250157607 + (TATG)n Simple_repeat Simple_repeat 2 88 0 404 235 12 29 chr2 3099061 3099231 -250157352 + (TATATG)n Simple_repeat Simple_repeat 2 168 0 3911 121 27 12 chr2 3099238 3099897 -250156686 - HSMAR2 DNA Mariner -1 1301 633 2114 110 32 0 chr2 3099906 3100188 -250156395 + AluSg SINE Alu 18 308 -2 874 126 14 0 chr2 3100218 3100361 -250156222 + HSMAR2 DNA Mariner 739 883 -419 339 262 90 25 chr2 3101048 3101170 -250155413 - MIR SINE MIR -119 143 14 714 264 123 18 chr2 3101269 3101595 -250154988 - MLT1B LTR MaLR -30 360 1 375 207 5 48 chr2 3103023 3103160 -250153423 - MLT1A2 LTR MaLR -234 140 7 343 349 54 12 chr2 3103282 3103448 -250153135 + L3 LINE CR1 1192 1364 -213 256 197 15 15 chr2 3104090 3104156 -250152427 + C-rich Low_complexity Low_complexity 2 67 0 2338 83 7 0 chr2 3105194 3105483 -250151100 + AluY SINE Alu 2 292 -19 289 174 149 8 chr2 3107798 3107919 -250148664 - L1M3 LINE L1 -339 5844 5707 343 286 65 13 chr2 3108296 3108450 -250148133 - MIR3 SINE MIR -25 183 22 227 313 0 0 chr2 3112375 3112439 -250144144 + MIR SINE MIR 42 105 -103 302 244 105 27 chr2 3112905 3113059 -250143524 + MIR SINE MIR 88 262 0 405 155 10 19 chr2 3114396 3114499 -250142084 + CT-rich Low_complexity Low_complexity 3 104 0 1447 133 133 48 chr2 3114499 3114769 -250141814 - AluSx SINE Alu -19 293 1 2401 68 3 7 chr2 3116444 3116740 -250139843 + AluY SINE Alu 1 295 -16 22 35 0 0 chr2 3118134 3118163 -250138420 + AT_rich Low_complexity Low_complexity 1 29 0 2218 152 44 29 chr2 3119511 3119965 -250136618 - Charlie1a DNA MER1_type -356 1099 639 43795 35 21 1 chr2 3119982 3126012 -250130571 - L1PA3 LINE L1 0 6155 1 2203 244 41 14 chr2 3126015 3126602 -250129981 - Charlie1a DNA MER1_type -804 651 49 353 282 29 0 chr2 3126602 3126705 -250129878 - Charlie1a DNA MER1_type -1343 112 7 1114 219 11 6 chr2 3128086 3128384 -250128199 - MLT1A2 LTR MaLR -16 358 16 185 303 32 58 chr2 3129675 3129830 -250126753 + L2 LINE L2 3161 3311 -2 1145 165 176 24 chr2 3131496 3131751 -250124832 - AluJo SINE Alu -8 294 1 2195 110 0 20 chr2 3132161 3132462 -250124121 - AluSg SINE Alu -15 295 1 3070 236 91 30 chr2 3133181 3134013 -250122570 - L1ME1 LINE L1 0 6961 6182 1940 113 0 0 chr2 3134013 3134269 -250122314 - AluSc SINE Alu -17 292 37 3070 236 91 30 chr2 3134269 3135234 -250121349 - L1ME1 LINE L1 -779 6182 5050 21670 112 12 8 chr2 3135241 3138655 -250117928 - L1PA8A LINE L1 -12 6770 3371 261 0 0 0 chr2 3138655 3138684 -250117899 + (TA)n Simple_repeat Simple_repeat 1 29 0 2103 121 13 3 chr2 3138684 3138982 -250117601 - AluSg SINE Alu -9 301 1 21670 112 12 8 chr2 3138982 3139703 -250116880 - L1PA8A LINE L1 -3410 3372 2627 2100 172 31 21 chr2 3139700 3140260 -250116323 - L1PA8A LINE L1 -4559 2228 1668 * 5973 98 28 18 chr2 3140253 3141109 -250115474 - L1PA8A LINE L1 -5008 1203 339 1988 96 55 9 chr2 3141164 3141547 -250115036 - LTR7 LTR ERV1 0 450 1 3623 113 20 16 chr2 3141547 3142102 -250114481 - HERVH LTR ERV1 0 7713 7157 1659 122 16 0 chr2 3142094 3142348 -250114235 - HERVH LTR ERV1 -1696 6017 5760 * 5033 121 2 2 chr2 3142344 3143073 -250113510 - HERVH LTR ERV1 -3001 4712 3995 18715 143 9 27 chr2 3143086 3146565 -250110018 - HERVH LTR ERV1 -3979 3734 1 2074 105 31 8 chr2 3146565 3146956 -250109627 - LTR7 LTR ERV1 0 450 1 1296 227 84 27 chr2 3146956 3147362 -250109221 - L1ME1 LINE L1 -1928 5013 4585 431 119 15 0 chr2 3147361 3147428 -250109155 - L1MD3 LINE L1 -1188 6807 6740 * 1751 192 48 0 chr2 3147456 3147810 -250108773 - L1MB7 LINE L1 -26 6158 5788 * 3321 229 54 25 chr2 3147807 3148388 -250108195 - L1ME1 LINE L1 -2569 4372 3809 2246 122 48 14 chr2 3148388 3148740 -250107843 + THE1B LTR MaLR 1 364 0 3321 229 54 25 chr2 3148740 3149263 -250107320 - L1ME1 LINE L1 -3132 3809 3236 322 234 35 21 chr2 3149248 3149393 -250107190 - L1ME1 LINE L1 -4617 2324 2178 * 445 282 20 63 chr2 3149415 3149488 -250107095 - L1ME1 LINE L1 -4888 1535 1460 854 256 42 0 chr2 3149488 3149703 -250106880 - MER58A DNA MER1_type 0 224 1 445 282 20 63 chr2 3149703 3149881 -250106702 - L1ME1 LINE L1 -4963 1460 1295 870 245 50 0 chr2 3149881 3150081 -250106502 - MER58A DNA MER1_type 0 224 15 1383 218 116 9 chr2 3150081 3150512 -250106071 - L1ME1 LINE L1 -5140 1283 807 855 307 115 23 chr2 3150549 3151106 -250105477 - L1ME1 LINE L1 -5755 668 61 257 167 17 50 chr2 3152134 3152194 -250104389 - MIR SINE MIR -121 141 84 514 111 0 20 chr2 3152493 3152592 -250103991 + (TCCC)n Simple_repeat Simple_repeat 2 98 0 1707 218 9 14 chr2 3156866 3157214 -250099369 - MER7A DNA MER2_type 0 346 3 215 360 9 9 chr2 3157340 3157451 -250099132 + MIR SINE MIR 34 144 -64 295 286 181 29 chr2 3158209 3158380 -250098203 - L3 LINE CR1 -319 1258 1062 2073 200 30 30 chr2 3158475 3158975 -250097608 - MLT1D LTR MaLR -2 503 4 2146 162 21 72 chr2 3159616 3160086 -250096497 - L1MC1 LINE L1 0 6333 5888 282 298 96 40 chr2 3160477 3160675 -250095908 - MIR SINE MIR -23 239 31 21 0 0 0 chr2 3161329 3161350 -250095233 + AT_rich Low_complexity Low_complexity 1 21 0 1913 167 0 0 chr2 3161366 3161659 -250094924 - AluJo SINE Alu -19 293 1 2288 190 36 73 chr2 3161699 3162196 -250094387 + L1MD3 LINE L1 7419 7892 -103 2490 57 0 0 chr2 3162196 3162492 -250094091 + AluY SINE Alu 1 296 -15 2288 190 36 73 chr2 3162492 3162583 -250094000 + L1MD3 LINE L1 7892 7985 -10 489 309 68 4 chr2 3162877 3163129 -250093454 - L2 LINE L2 -1332 1982 1715 337 154 0 0 chr2 3163306 3163358 -250093225 - MER20 DNA MER1_type 0 219 168 862 271 298 16 chr2 3163365 3164067 -250092516 - L2 LINE L2 -1696 1618 1115 279 0 0 0 chr2 3164067 3164098 -250092485 + (GA)n Simple_repeat Simple_repeat 2 32 0 862 271 298 16 chr2 3164098 3164371 -250092212 - L2 LINE L2 -2199 1115 368 313 261 11 23 chr2 3164382 3164470 -250092113 + L1ME LINE L1 5582 5668 -453 29 28 0 0 chr2 3164609 3164645 -250091938 + AT_rich Low_complexity Low_complexity 1 36 0 456 287 223 16 chr2 3166542 3166789 -250089794 + Tigger8 DNA MER2_type 29 326 -340 190 106 43 0 chr2 3166991 3167038 -250089545 + (TTATA)n Simple_repeat Simple_repeat 5 53 0 429 263 227 10 chr2 3167168 3167366 -250089217 - L2 LINE L2 0 3272 3032 181 252 133 22 chr2 3167550 3167685 -250088898 - MIR SINE MIR -52 210 61 441 249 64 77 chr2 3168220 3168555 -250088028 - MLT1J2 LTR MaLR -3 416 89 240 223 277 0 chr2 3170767 3170879 -250085704 + MIR SINE MIR 112 254 -8 327 388 25 0 chr2 3171418 3171539 -250085044 + MIR SINE MIR 22 145 -63 346 286 54 65 chr2 3171547 3171732 -250084851 - MIR3 SINE MIR -6 202 20 445 220 17 12 chr2 3171732 3171905 -250084678 + CT-rich Low_complexity Low_complexity 3 176 0 917 154 149 0 chr2 3171907 3172082 -250084501 - AluJo SINE Alu -25 287 87 21 0 0 0 chr2 3172223 3172244 -250084339 + AT_rich Low_complexity Low_complexity 1 21 0 2502 101 121 16 chr2 3173284 3173671 -250082912 + MSTA LTR MaLR 1 428 0 384 22 0 0 chr2 3173751 3173796 -250082787 + (TG)n Simple_repeat Simple_repeat 2 46 0 22 80 0 0 chr2 3175492 3175542 -250081041 + AT_rich Low_complexity Low_complexity 1 50 0 195 343 0 30 chr2 3175791 3175858 -250080725 - L2 LINE L2 -71 3201 3137 577 253 90 50 chr2 3175990 3176488 -250080095 + L1MEc LINE L1 784 1301 -5095 299 304 164 29 chr2 3176644 3176924 -250079659 - L2 LINE L2 -1682 1632 1315 4226 95 20 4 chr2 3176995 3177540 -250079043 - MER41A LTR ERV1 0 554 1 657 196 40 20 chr2 3178813 3178961 -250077622 - L1M4c LINE L1 -4860 1786 1636 * 3779 226 15 33 chr2 3178949 3179831 -250076752 - L1M4c LINE L1 -5662 880 15 322 236 0 14 chr2 3180144 3180216 -250076367 + MER94 DNA DNA 1 71 -63 227 265 0 0 chr2 3180231 3180280 -250076303 + GA-rich Low_complexity Low_complexity 2 50 0 2078 127 7 0 chr2 3180348 3180648 -250075935 - AluSx SINE Alu -10 302 1 21 0 0 0 chr2 3180856 3180877 -250075706 + AT_rich Low_complexity Low_complexity 1 21 0 1883 223 79 28 chr2 3180926 3181535 -250075048 + MER114 LTR ERV 1 640 -8 649 264 137 42 chr2 3182535 3183038 -250073545 - L1MEc LINE L1 -5812 584 34 4797 88 45 37 chr2 3184513 3185194 -250071389 - LTR12 LTR ERV1 -1 687 1 2857 80 14 8 chr2 3185421 3185783 -250070800 - THE1B LTR MaLR 0 364 1 527 297 36 10 chr2 3186272 3186464 -250070119 + MER63A DNA MER1_type 14 210 0 189 195 0 0 chr2 3187278 3187319 -250069264 + (CATATA)n Simple_repeat Simple_repeat 1 41 0 338 253 11 22 chr2 3187320 3187391 -250069192 + L1MC4 LINE L1 6613 6684 -1358 243 0 0 0 chr2 3187391 3187418 -250069165 + (TC)n Simple_repeat Simple_repeat 2 28 0 338 253 11 22 chr2 3187418 3187437 -250069146 + L1MC4 LINE L1 6684 6702 -1340 356 215 9 0 chr2 3187537 3187644 -250068939 + (TA)n Simple_repeat Simple_repeat 2 109 0 243 0 0 0 chr2 3187649 3187676 -250068907 + (TC)n Simple_repeat Simple_repeat 2 28 0 180 0 0 0 chr2 3187675 3187695 -250068888 + (TA)n Simple_repeat Simple_repeat 1 20 0 * 225 0 0 0 chr2 3187694 3187719 -250068864 + (CA)n Simple_repeat Simple_repeat 2 26 0 320 229 9 0 chr2 3187801 3187910 -250068673 + (TA)n Simple_repeat Simple_repeat 2 111 0 252 170 0 0 chr2 3187980 3188033 -250068550 + (TA)n Simple_repeat Simple_repeat 2 54 0 2492 166 29 45 chr2 3188035 3188503 -250068080 - MLT2B3 LTR ERVL -35 510 58 1762 166 11 65 chr2 3188505 3188861 -250067722 + MER1B DNA MER1_type 1 337 -2 542 31 0 0 chr2 3188862 3188926 -250067657 - MLT2B3 LTR ERVL -490 64 1 498 276 56 23 chr2 3189531 3189745 -250066838 - Zaphod DNA AcHobo 0 4031 3811 1919 175 55 134 chr2 3189748 3190566 -250066017 - Zaphod DNA AcHobo -2756 1275 523 234 268 71 0 chr2 3190669 3190781 -250065802 - Zaphod DNA AcHobo -3719 312 193 320 276 126 0 chr2 3192067 3192194 -250064389 + MIR3 SINE MIR 4 146 -62 2679 191 85 77 chr2 3192288 3193007 -250063576 + LTR8A LTR ERV1 1 725 -2 1799 266 19 8 chr2 3193141 3193623 -250062960 - MER41E LTR ERV1 -5 507 21 1916 171 24 0 chr2 3194018 3194358 -250062225 - MER57A LTR ERV1 -48 355 8 2024 108 4 14 chr2 3195085 3195362 -250061221 + AluSp SINE Alu 1 274 -39 3788 183 57 1 chr2 3196242 3196947 -250059636 + Tigger2 DNA MER2_type 1 744 -1974 1616 127 20 0 chr2 3197014 3197266 -250059317 + Tigger2 DNA MER2_type 2462 2718 0 3495 118 19 6 chr2 3197325 3197841 -250058742 - MER1A DNA MER1_type -6 523 1 245 285 244 16 chr2 3197869 3198062 -250058521 + MIR SINE MIR 21 257 -5 626 202 0 9 chr2 3198215 3198329 -250058254 + L2 LINE L2 3197 3309 -4 25 51 0 0 chr2 3200683 3200722 -250055861 + AT_rich Low_complexity Low_complexity 1 39 0 497 234 109 85 chr2 3201039 3201306 -250055277 - L1ME1 LINE L1 -18 6148 5875 1340 250 76 7 chr2 3201429 3201865 -250054718 - MLT1C LTR MaLR -1 466 1 192 211 0 0 chr2 3202300 3202338 -250054245 + L3 LINE CR1 1514 1551 -26 270 300 118 18 chr2 3203123 3203233 -250053350 - L2 LINE L2 0 3313 3193 1437 37 0 0 chr2 3203243 3203404 -250053179 - L1PA3 LINE L1 -3 6152 5992 825 41 0 0 chr2 3203404 3203502 -250053081 + L1PA3 LINE L1 5899 5996 -159 1904 155 0 19 chr2 3203651 3203960 -250052623 - AluJo SINE Alu -9 303 1 383 178 82 0 chr2 3204246 3204319 -250052264 + MER3 DNA MER1_type 115 193 -16 212 193 36 133 chr2 3204496 3204579 -250052004 + L2 LINE L2 3117 3191 -81 247 326 74 0 chr2 3204640 3204735 -250051848 - L2 LINE L2 -22 3250 3149 620 318 108 43 chr2 3204859 3205516 -250051067 - L2 LINE L2 -338 2976 2277 259 182 0 18 chr2 3205552 3205607 -250050976 + Ricksha DNA DNA 815 868 -1178 2207 163 52 12 chr2 3205610 3205847 -250050736 - MLT1C LTR MaLR -27 440 179 2412 94 0 0 chr2 3205847 3206156 -250050427 - AluSg SINE Alu -1 309 1 2207 163 52 12 chr2 3206156 3206323 -250050260 - MLT1C LTR MaLR -288 179 20 694 234 119 22 chr2 3206340 3206566 -250050017 + MLT1A1 LTR MaLR 11 258 -107 865 173 12 19 chr2 3206577 3206739 -250049844 + MLT1A1 LTR MaLR 205 365 0 268 276 120 26 chr2 3206759 3206951 -250049632 - L2 LINE L2 -1087 2227 2018 1699 215 27 87 chr2 3208130 3208242 -250048341 - MLT2B3 LTR ERVL -2 552 435 3568 81 25 2 chr2 3208242 3208685 -250047898 + MLT2A2 LTR ERVL 1 453 0 1699 215 27 87 chr2 3208685 3209158 -250047425 - MLT2B3 LTR ERVL -119 435 2 1266 152 156 56 chr2 3209485 3209659 -250046924 + AluJo SINE Alu 1 213 -99 2212 152 48 28 chr2 3209659 3210014 -250046569 - THE1B LTR MaLR 0 364 3 1266 152 156 56 chr2 3210014 3210109 -250046474 + AluJo SINE Alu 213 297 -15 241 143 36 18 chr2 3210886 3210942 -250045641 - L1MC4 LINE L1 -1343 6699 6643 268 329 48 14 chr2 3211708 3211854 -250044729 + L2 LINE L2 2885 3035 -237 21 0 0 0 chr2 3211961 3211982 -250044601 + AT_rich Low_complexity Low_complexity 1 21 0 10459 129 11 10 chr2 3212918 3215302 -250041281 - L1PA11 LINE L1 -2 6172 3775 2523 102 0 74 chr2 3215302 3215691 -250040892 - L1PB1 LINE L1 0 6151 5787 7150 123 13 3 chr2 3215695 3216972 -250039611 - L1MA2 LINE L1 -26 6278 4992 6549 126 2 25 chr2 3216970 3218377 -250038206 - L1PB1 LINE L1 -3 7586 6212 * 1503 249 37 0 chr2 3218373 3218810 -250037773 - L1 LINE L1 -2794 4790 4338 * 10232 125 54 9 chr2 3218944 3221242 -250035341 - L1PBa LINE L1 -3714 3148 599 1309 131 10 0 chr2 3221216 3221414 -250035169 - L1PBa LINE L1 -6663 200 1 * 14662 205 23 28 chr2 3221425 3225583 -250031000 - L1PB1 LINE L1 -2361 5223 2 514 258 50 33 chr2 3226974 3227156 -250029427 - L1MC4 LINE L1 -1373 6669 6485 275 70 0 0 chr2 3228517 3228560 -250028023 + Alu SINE Alu 260 302 0 254 69 52 69 chr2 3228693 3228751 -250027832 + MLT1B LTR MaLR 1 57 -333 186 304 120 0 chr2 3229183 3229275 -250027308 - MIR SINE MIR -71 191 89 463 279 109 80 chr2 3231499 3231866 -250024717 + MLT1H1 LTR MaLR 100 484 -71 2181 108 0 7 chr2 3231866 3232172 -250024411 + AluSx SINE Alu 1 304 -8 463 279 109 80 chr2 3232172 3232244 -250024339 + MLT1H1 LTR MaLR 484 552 -3 867 87 17 29 chr2 3233015 3233188 -250023395 + (TTCCC)n Simple_repeat Simple_repeat 3 173 0 484 328 22 11 chr2 3234026 3234209 -250022374 - MIR SINE MIR -8 254 70 2489 110 17 80 chr2 3234237 3234354 -250022229 - L1MA4A LINE L1 -11 6292 6169 2380 64 0 10 chr2 3234354 3234667 -250021916 - AluY SINE Alu -1 310 1 2489 110 17 80 chr2 3234667 3235014 -250021569 - L1MA4A LINE L1 -134 6169 5857 608 162 0 51 chr2 3235221 3235264 -250021319 + L1MA3 LINE L1 6195 6239 -66 2439 120 28 11 chr2 3235264 3235622 -250020961 + THE1B LTR MaLR 1 364 0 608 162 0 51 chr2 3235622 3235695 -250020888 + L1MA3 LINE L1 6239 6305 0 265 320 22 10 chr2 3236808 3236942 -250019641 + MIR SINE MIR 85 218 -44 241 232 85 73 chr2 3237045 3237127 -250019456 + MIR SINE MIR 87 169 -93 1841 108 7 32 chr2 3237648 3237926 -250018657 + AluSx SINE Alu 3 273 -39 228 292 0 0 chr2 3238463 3238528 -250018055 + (CAATT)n Simple_repeat Simple_repeat 3 67 0 185 250 0 18 chr2 3239758 3239814 -250016769 + L2 LINE L2 3194 3248 -24 283 175 18 0 chr2 3239814 3239871 -250016712 - MLT1I LTR MaLR 0 409 352 769 276 44 4 chr2 3239918 3240143 -250016440 - MLT1I LTR MaLR -175 234 1 2086 74 0 0 chr2 3240516 3240786 -250015797 + AluY SINE Alu 39 308 -3 2319 81 0 0 chr2 3242254 3242563 -250014020 + AluY SINE Alu 1 309 -2 2054 100 19 19 chr2 3242852 3243163 -250013420 + AluSq SINE Alu 3 313 0 803 185 43 19 chr2 3243965 3244176 -250012407 + Charlie5 DNA MER1_type 2366 2581 -31 335 279 14 0 chr2 3244244 3244391 -250012192 + CT-rich Low_complexity Low_complexity 4 152 0 2725 83 11 0 chr2 3244630 3244981 -250011602 - THE1A LTR MaLR 0 355 1 12102 93 2 1 chr2 3244981 3246558 -250010025 - THE1A-int LTR MaLR 0 1580 1 2486 104 17 20 chr2 3246558 3246914 -250009669 - THE1A LTR MaLR 0 355 1 346 307 122 55 chr2 3246982 3247220 -250009363 - L2 LINE L2 0 3272 3019 249 327 36 27 chr2 3248259 3248369 -250008214 + L2 LINE L2 3157 3267 -5 2327 103 0 0 chr2 3248434 3248746 -250007837 - AluSx SINE Alu 0 312 1 204 276 105 0 chr2 3252093 3252169 -250004414 + MIR SINE MIR 138 221 -41 248 292 123 39 chr2 3252623 3252753 -250003830 + MIR3 SINE MIR 34 174 -34 227 261 203 0 chr2 3253407 3253476 -250003107 - MIR SINE MIR -63 145 63 197 304 36 0 chr2 3253969 3254025 -250002558 + L2 LINE L2 3248 3305 -8 372 311 0 19 chr2 3254025 3254131 -250002452 + MIR SINE MIR 42 145 -63 25 51 0 0 chr2 3254222 3254261 -250002322 + AT_rich Low_complexity Low_complexity 1 39 0 432 214 119 8 chr2 3254783 3254909 -250001674 + MIR SINE MIR 113 252 -10 220 273 15 15 chr2 3255057 3255123 -250001460 + L2 LINE L2 3202 3267 -5 2202 98 0 0 chr2 3255268 3255574 -250001009 - AluSc SINE Alu -3 306 1 381 258 25 58 chr2 3255603 3255723 -250000860 + L2 LINE L2 3134 3249 -23 329 207 224 35 chr2 3255965 3256081 -250000502 - L2 LINE L2 -15 3298 3161 395 288 85 30 chr2 3257339 3257575 -249999008 + HERV16 LTR ERVL 1241 1489 -3507 379 230 11 0 chr2 3258021 3258108 -249998475 - MER53 DNA DNA -2 187 100 269 146 104 0 chr2 3259440 3259488 -249997095 + Charlie3 DNA MER1_type 2645 2697 -13 295 178 14 14 chr2 3259542 3259615 -249996968 + GA-rich Low_complexity Low_complexity 4 76 0 982 264 162 57 chr2 3259829 3260085 -249996498 - HAL1 LINE L1 -1352 1155 927 1915 141 7 0 chr2 3260085 3260384 -249996199 - AluSx SINE Alu -11 301 1 982 264 162 57 chr2 3260384 3260795 -249995788 - HAL1 LINE L1 -1580 927 418 285 232 0 0 chr2 3260858 3260927 -249995656 + CT-rich Low_complexity Low_complexity 5 73 0 3629 121 19 4 chr2 3260978 3261492 -249995091 - MER1A DNA MER1_type -5 524 3 277 303 37 28 chr2 3261736 3261845 -249994738 - L1MC4 LINE L1 -140 7902 7793 1513 203 128 30 chr2 3261860 3262298 -249994285 - MLT1D LTR MaLR -4 501 21 1782 152 18 0 chr2 3262436 3262713 -249993870 + AluJb SINE Alu 13 294 -18 412 214 128 0 chr2 3262723 3262840 -249993743 - L1MC4 LINE L1 -386 7656 7525 1838 135 44 0 chr2 3263350 3263647 -249992936 - AluSx SINE Alu -2 310 1 245 240 13 13 chr2 3263721 3263796 -249992787 + (TA)n Simple_repeat Simple_repeat 2 76 0 1800 144 0 21 chr2 3264422 3264713 -249991870 - AluJo SINE Alu -10 302 18 282 116 0 0 chr2 3264935 3264978 -249991605 + (GGGGA)n Simple_repeat Simple_repeat 4 46 0 2152 98 55 33 chr2 3265028 3265395 -249991188 + THE1C LTR MaLR 1 375 0 250 328 25 34 chr2 3266063 3266182 -249990401 - MIR SINE MIR -121 141 24 244 325 51 8 chr2 3266724 3266841 -249989742 - MIR SINE MIR -90 172 51 591 134 47 20 chr2 3267946 3268298 -249988285 + (TG)n Simple_repeat Simple_repeat 1 361 0 499 180 28 17 chr2 3268313 3268491 -249988092 + (TG)n Simple_repeat Simple_repeat 1 180 0 666 124 47 9 chr2 3268524 3268863 -249987720 + (TG)n Simple_repeat Simple_repeat 1 352 0 410 117 32 11 chr2 3269138 3269232 -249987351 + (TG)n Simple_repeat Simple_repeat 1 96 0 872 196 119 35 chr2 3269241 3269559 -249987024 + MSTC LTR MaLR 42 421 -7 1102 240 50 89 chr2 3269766 3270325 -249986258 - MER89 LTR ERV1 -22 537 1 180 0 0 0 chr2 3270941 3270961 -249985622 + (TC)n Simple_repeat Simple_repeat 2 21 0 3774 157 21 97 chr2 3271897 3272108 -249984475 - MER54B LTR ERVL 0 793 568 1625 184 0 27 chr2 3272108 3272402 -249984181 - AluJb SINE Alu -26 286 1 3774 157 21 97 chr2 3272402 3273048 -249983535 - MER54B LTR ERVL -225 568 1 304 346 59 0 chr2 3275697 3275833 -249980750 - MIR SINE MIR -18 244 101 1775 194 22 27 chr2 3275905 3276272 -249980311 + MLT1A1 LTR MaLR 1 365 0 204 125 0 0 chr2 3276491 3276523 -249980060 + (CTG)n Simple_repeat Simple_repeat 2 33 0 243 216 39 0 chr2 3276638 3276689 -249979894 + CT-rich Low_complexity Low_complexity 3 55 0 257 287 151 6 chr2 3277500 3277623 -249978960 - MIR SINE MIR -61 147 30 259 279 67 39 chr2 3277702 3277806 -249978777 + MIR SINE MIR 48 154 -108 227 266 16 0 chr2 3279322 3279386 -249977197 - L2 LINE L2 -5 3267 3203 306 281 58 8 chr2 3279425 3279546 -249977037 + L1MEd LINE L1 54 180 -5939 552 231 140 52 chr2 3279866 3280174 -249976409 + L1MC4 LINE L1 7708 8042 0 655 331 84 22 chr2 3280177 3280545 -249976038 + L1MEd LINE L1 404 794 -5325 303 305 121 11 chr2 3281289 3281561 -249975022 + L1M4 LINE L1 3626 3927 -2219 531 269 87 107 chr2 3281709 3282316 -249974267 - MLT1G1 LTR MaLR 0 595 1 185 333 0 15 chr2 3282715 3282781 -249973802 - MIR SINE MIR -150 112 48 738 462 14 41 chr2 3283671 3283745 -249972838 + MER44D DNA MER2_type 1 76 -2415 180 0 0 0 chr2 3283745 3283765 -249972818 + (GA)n Simple_repeat Simple_repeat 1 20 0 738 462 14 41 chr2 3283765 3283980 -249972603 + MER44D DNA MER2_type 76 552 -57 241 248 173 51 chr2 3284066 3284280 -249972303 - L1MEc LINE L1 -1163 5052 4813 617 297 110 64 chr2 3284605 3285956 -249970627 - L1MEc LINE L1 -1672 4543 3255 2504 98 0 35 chr2 3285956 3285996 -249970587 - THE1B LTR MaLR 0 364 324 2252 95 6 38 chr2 3285996 3286312 -249970271 + AluY SINE Alu 1 306 -5 2504 98 0 35 chr2 3286312 3286648 -249969935 - THE1B LTR MaLR -40 324 1 10460 108 33 34 chr2 3286648 3288230 -249968353 - THE1B-int LTR MaLR 0 1580 1 2611 123 0 3 chr2 3288230 3288595 -249967988 - THE1B LTR MaLR 0 364 1 617 297 110 64 chr2 3288595 3289030 -249967553 - L1MEc LINE L1 -2959 3256 2673 4084 237 79 18 chr2 3289160 3290573 -249966010 - L1MC/D LINE L1 -743 5821 4424 592 183 46 8 chr2 3290617 3290748 -249965835 - L1 LINE L1 -1862 4284 4149 * 5910 126 28 22 chr2 3290746 3291973 -249964610 - L1P4 LINE L1 -587 5581 4364 3534 274 24 24 chr2 3291995 3293158 -249963425 - L1MC/D LINE L1 -4878 1167 5 965 222 4 12 chr2 3293172 3293424 -249963159 - L1MEc LINE L1 -3951 2445 2196 1559 93 0 0 chr2 3293459 3293652 -249962931 + AluSg1 SINE Alu 9 201 -108 227 148 37 0 chr2 3293752 3293806 -249962777 + C-rich Low_complexity Low_complexity 2 57 0 228 111 0 0 chr2 3294196 3294232 -249962351 + (T)n Simple_repeat Simple_repeat 1 36 0 22298 154 25 41 chr2 3295264 3296189 -249960394 - L1PB1 LINE L1 -1 6465 5527 2872 93 0 3 chr2 3296189 3296565 -249960018 - THE1C LTR MaLR 0 375 1 22298 154 25 41 chr2 3296565 3297358 -249959225 - L1PB1 LINE L1 -939 5527 4723 1841 126 18 22 chr2 3297358 3297636 -249958947 - AluSx SINE Alu 0 312 36 22298 154 25 41 chr2 3297636 3297698 -249958885 - L1PB1 LINE L1 -1743 4723 4662 6544 71 0 2 chr2 3297698 3299362 -249957221 - L1PA8A LINE L1 -3 6128 4477 5737 38 0 18 chr2 3299367 3300072 -249956511 - L1PA4 LINE L1 0 6155 5464 22298 154 25 41 chr2 3300072 3301264 -249955319 - L1PB1 LINE L1 -1808 4658 3448 234 0 0 0 chr2 3301264 3301290 -249955293 + (TA)n Simple_repeat Simple_repeat 2 27 0 22298 154 25 41 chr2 3301290 3304807 -249951776 - L1PB1 LINE L1 -3018 3448 1 4541 206 16 2 chr2 3304817 3305751 -249950832 - L1 LINE L1 -1773 4373 3427 336 270 138 7 chr2 3307010 3307162 -249949421 - MIR SINE MIR -79 183 12 215 342 63 54 chr2 3309577 3309799 -249946784 - L2 LINE L2 -125 3147 2924 3580 75 25 2 chr2 3311079 3311559 -249945024 + L1PA8 LINE L1 5682 6172 0 483 247 121 6 chr2 3312229 3312411 -249944172 + MIR SINE MIR 59 261 -1 281 250 218 16 chr2 3313193 3313445 -249943138 - L1ME4a LINE L1 -4 6117 5815 23 0 0 0 chr2 3313476 3313499 -249943084 + AT_rich Low_complexity Low_complexity 1 23 0 409 269 154 29 chr2 3313755 3313930 -249942653 - Charlie8 DNA MER1_type -2195 222 26 237 363 50 16 chr2 3314338 3314520 -249942063 - MIR SINE MIR -73 189 2 316 275 128 0 chr2 3315649 3315758 -249940825 - L2 LINE L2 -3 3310 3188 2367 92 7 3 chr2 3316097 3316400 -249940183 - AluSx SINE Alu -8 304 1 230 206 118 0 chr2 3318177 3318245 -249938338 - MIR3 SINE MIR -21 187 112 21 36 0 0 chr2 3318783 3318811 -249937772 + AT_rich Low_complexity Low_complexity 1 28 0 195 136 0 58 chr2 3319021 3319124 -249937459 + (TA)n Simple_repeat Simple_repeat 1 97 0 186 133 0 0 chr2 3319776 3319806 -249936777 + (T)n Simple_repeat Simple_repeat 1 30 0 187 221 0 88 chr2 3320954 3321022 -249935561 + MIR SINE MIR 109 170 -92 315 62 0 42 chr2 3322184 3322232 -249934351 + Alu SINE Alu 250 295 -6 1349 280 48 26 chr2 3322232 3322914 -249933669 - L1MEc LINE L1 -4222 2174 1478 1913 142 79 17 chr2 3323935 3324288 -249932295 + THE1C LTR MaLR 1 375 0 386 267 62 67 chr2 3325189 3325399 -249931184 - MLT1K LTR MaLR 0 588 380 256 250 0 112 chr2 3325425 3325541 -249931042 - L2 LINE L2 -18 3295 3193 1782 196 88 60 chr2 3325927 3326426 -249930157 - MLT2B1 LTR ERVL -3 517 5 330 317 81 16 chr2 3326427 3326613 -249929970 - MIR SINE MIR -25 237 40 201 250 26 13 chr2 3327874 3327950 -249928633 + CT-rich Low_complexity Low_complexity 3 79 0 215 237 278 18 chr2 3329065 3329234 -249927349 - MIR SINE MIR -20 242 30 299 310 8 0 chr2 3329877 3330006 -249926577 + (TG)n Simple_repeat Simple_repeat 2 131 0 423 322 0 0 chr2 3330025 3330205 -249926378 + (TG)n Simple_repeat Simple_repeat 1 180 0 2282 266 70 14 chr2 3330786 3331737 -249924846 - Charlie2 DNA MER1_type 0 2862 1858 464 284 64 36 chr2 3331757 3332007 -249924576 - Charlie2 DNA MER1_type -2560 302 46 497 287 18 24 chr2 3332014 3332181 -249924402 - MER5B DNA MER1_type -12 166 1 204 276 83 70 chr2 3333052 3333208 -249923375 + L2 LINE L2 3155 3312 -1 3064 196 16 13 chr2 3333626 3334260 -249922323 - L1MA4 LINE L1 -6 6294 5659 2019 144 42 31 chr2 3335386 3335746 -249920837 + THE1B LTR MaLR 1 364 0 392 215 0 0 chr2 3335919 3336012 -249920571 - L1MB8 LINE L1 -2 6176 6084 2130 222 45 8 chr2 3336024 3336515 -249920068 - L1MB4 LINE L1 -13 6167 5659 248 222 34 26 chr2 3337049 3337166 -249919417 + (TA)n Simple_repeat Simple_repeat 2 119 0 243 175 48 16 chr2 3337882 3337945 -249918638 + MIR SINE MIR 104 168 -94 306 290 128 39 chr2 3338686 3339027 -249917556 - L2 LINE L2 -183 3130 2705 183 311 123 0 chr2 3339056 3339162 -249917421 - L2 LINE L2 -703 2611 2493 809 263 10 0 chr2 3339212 3339406 -249917177 - MLT1A1 LTR MaLR 0 365 170 788 167 29 64 chr2 3339510 3339714 -249916869 - MLT1A1 LTR MaLR -176 198 2 1617 199 178 20 chr2 3341063 3341108 -249915475 - MLT2B2 LTR ERVL 0 515 478 240 35 0 0 chr2 3341108 3341137 -249915446 + (CA)n Simple_repeat Simple_repeat 2 30 0 1617 199 178 20 chr2 3341137 3341534 -249915049 - MLT2B2 LTR ERVL -37 478 3 2365 127 25 0 chr2 3341679 3342034 -249914549 - THE1B LTR MaLR 0 364 1 3893 75 26 0 chr2 3342034 3342530 -249914053 - THE1B-int LTR MaLR 0 1580 1072 4401 164 33 33 chr2 3342531 3343518 -249913065 - MER11C LTR ERVK 0 1071 1 6923 116 19 40 chr2 3343518 3344602 -249911981 - THE1B-int LTR MaLR -519 1061 1 2319 130 28 3 chr2 3344602 3344956 -249911627 - THE1B LTR MaLR 0 364 2 275 317 49 21 chr2 3344998 3345140 -249911443 - MIR3 SINE MIR -60 148 3 2095 118 180 114 chr2 3345434 3346002 -249910581 + LTR18B LTR ERVL 1 605 -9 267 317 50 17 chr2 3346091 3346211 -249910372 + MIR SINE MIR 22 145 -117 1642 183 49 24 chr2 3346668 3346996 -249909587 - MLT1A1 LTR MaLR -4 361 26 216 0 0 0 chr2 3348322 3348346 -249908237 + (T)n Simple_repeat Simple_repeat 1 24 0 219 336 37 15 chr2 3349104 3349238 -249907345 + MIR SINE MIR 16 152 -56 2529 116 3 0 chr2 3350644 3350998 -249905585 + THE1A LTR MaLR 1 355 0 1358 147 0 9 chr2 3352305 3352516 -249904067 - AluJb SINE Alu -20 292 84 326 253 110 24 chr2 3352714 3352858 -249903725 - MER5B DNA MER1_type -24 165 2 200 339 77 15 chr2 3353388 3353518 -249903065 - MIR3 SINE MIR -6 202 65 2228 148 36 17 chr2 3353672 3354029 -249902554 + THE1B LTR MaLR 1 364 0 182 193 35 70 chr2 3354503 3354560 -249902023 - MIR3 SINE MIR -54 154 100 1111 124 34 51 chr2 3354658 3354837 -249901746 - L1MA8 LINE L1 -10 6281 6104 2188 113 3 0 chr2 3354837 3355140 -249901443 + AluSx SINE Alu 1 304 0 1111 124 34 51 chr2 3355140 3355193 -249901390 - L1MA8 LINE L1 -187 6104 6052 307 286 0 0 chr2 3355235 3355312 -249901271 + MIR SINE MIR 173 249 -13 472 306 40 5 chr2 3355401 3355600 -249900983 - MIR SINE MIR -7 255 50 237 204 0 0 chr2 3356243 3356292 -249900291 - L3 LINE CR1 -180 1397 1349 21 0 0 0 chr2 3356634 3356655 -249899928 + AT_rich Low_complexity Low_complexity 1 21 0 255 232 29 14 chr2 3356755 3356824 -249899759 - MLT1I LTR MaLR -30 379 310 264 356 29 19 chr2 3357042 3357250 -249899333 - L1M4 LINE L1 -1333 4813 4604 4637 205 19 12 chr2 3357286 3358484 -249898099 - L1PA16 LINE L1 -722 5444 4232 4068 137 63 1 chr2 3358484 3359149 -249897434 + L1PA16 LINE L1 5452 6157 -9 39 0 0 0 chr2 3359559 3359598 -249896985 + AT_rich Low_complexity Low_complexity 1 39 0 273 183 0 0 chr2 3359854 3359914 -249896669 + (TA)n Simple_repeat Simple_repeat 2 61 0 467 322 91 10 chr2 3360145 3360539 -249896044 - HAL1 LINE L1 -855 1652 1227 468 286 36 96 chr2 3360561 3360977 -249895606 - L1MEd LINE L1 -5034 1085 695 217 358 37 19 chr2 3361681 3361843 -249894740 - L3 LINE CR1 -606 971 807 3598 137 18 0 chr2 3362009 3362521 -249894062 + MER1A DNA MER1_type 1 521 -8 276 331 108 7 chr2 3362675 3362823 -249893760 + MIR SINE MIR 49 211 -51 744 212 38 11 chr2 3363462 3363646 -249892937 + MER5A DNA MER1_type 1 189 0 215 205 0 0 chr2 3364464 3364503 -249892080 + GA-rich Low_complexity Low_complexity 1 39 0 211 317 98 55 chr2 3365931 3366095 -249890488 - MIR3 SINE MIR -32 176 6 242 222 14 28 chr2 3366793 3366865 -249889718 + CT-rich Low_complexity Low_complexity 2 72 0 203 200 0 40 chr2 3367484 3367534 -249889049 + C-rich Low_complexity Low_complexity 5 52 0 1123 293 43 5 chr2 3368096 3368536 -249888047 + MLT1C LTR MaLR 1 457 -10 2848 85 0 0 chr2 3368697 3369061 -249887522 + THE1B LTR MaLR 1 364 0 192 302 128 20 chr2 3369697 3369846 -249886737 + MIR3 SINE MIR 33 197 -11 236 221 143 0 chr2 3370314 3370391 -249886192 - MER5A DNA MER1_type -80 109 22 219 233 0 0 chr2 3372114 3372157 -249884426 + (CAT)n Simple_repeat Simple_repeat 3 45 0 227 255 0 0 chr2 3374366 3374417 -249882166 + PABL_B LTR ERV1 1 51 -616 272 336 96 64 chr2 3374455 3374767 -249881816 + PABL_A LTR ERV1 25 346 -314 820 229 36 32 chr2 3374938 3375191 -249881392 + PABL_B LTR ERV1 414 667 0 230 254 17 0 chr2 3375888 3375947 -249880636 + L3 LINE CR1 1515 1574 -3 771 170 7 22 chr2 3376664 3376799 -249879784 + FLAM_C SINE Alu 1 133 0 377 306 23 12 chr2 3376879 3377052 -249879531 - HAL1 LINE L1 -89 2418 2244 811 287 120 40 chr2 3377289 3378095 -249878488 - HAL1 LINE L1 -604 1903 1033 1319 119 39 153 chr2 3378099 3378459 -249878124 - L1MA4A LINE L1 0 6303 5985 900 216 42 0 chr2 3378722 3378912 -249877671 - MER58A DNA MER1_type -3 221 24 241 305 51 0 chr2 3379032 3379150 -249877433 - HAL1 LINE L1 -1777 730 607 277 344 2 11 chr2 3379259 3379370 -249877213 + MER5A DNA MER1_type 67 172 -6 226 277 161 15 chr2 3379931 3380068 -249876515 + MER110 LTR ERV1 307 463 -28 240 200 0 0 chr2 3381620 3381670 -249874913 + (TG)n Simple_repeat Simple_repeat 1 50 0 3268 84 34 2 chr2 3381928 3382366 -249874217 + MLT2A2 LTR ERVL 2 453 0 43778 78 13 4 chr2 3382366 3387970 -249868613 + HERVL-A2 LTR ERVL 1 5654 0 3094 97 26 29 chr2 3387970 3388381 -249868202 + MLT2A2 LTR ERVL 1 411 -42 198 0 0 0 chr2 3388381 3388403 -249868180 + (TA)n Simple_repeat Simple_repeat 2 23 0 375 23 0 0 chr2 3388409 3388453 -249868130 + (TC)n Simple_repeat Simple_repeat 1 44 0 3094 97 26 29 chr2 3388453 3388488 -249868095 + MLT2A2 LTR ERVL 416 453 0 1271 160 106 57 chr2 3388886 3389168 -249867415 - AluJo SINE Alu -16 296 1 489 279 132 11 chr2 3389675 3389865 -249866718 + MIR SINE MIR 50 262 0 1500 204 56 66 chr2 3390656 3391049 -249865534 + MLT1B LTR MaLR 1 389 -1 328 248 95 19 chr2 3391071 3391176 -249865407 - L1ME3A LINE L1 -223 5947 5835 1578 90 0 0 chr2 3393079 3393290 -249863293 - L1PA8 LINE L1 0 6172 5962 1841 122 38 94 chr2 3394024 3394079 -249862504 + THE1C LTR MaLR 1 58 -317 2373 94 7 0 chr2 3394079 3394387 -249862196 + AluSx SINE Alu 1 310 -2 1841 122 38 94 chr2 3394387 3394726 -249861857 + THE1C LTR MaLR 58 373 -2 299 132 0 19 chr2 3395247 3395300 -249861283 + THE1C LTR MaLR 124 175 -200 202 178 56 33 chr2 3396036 3396126 -249860457 + (TA)n Simple_repeat Simple_repeat 1 92 0 26 30 0 0 chr2 3396210 3396243 -249860340 + AT_rich Low_complexity Low_complexity 1 33 0 1124 110 12 18 chr2 3397250 3397413 -249859170 - AluJ SINE Alu -11 301 140 333 132 19 0 chr2 3397697 3397750 -249858833 + MSTA LTR MaLR 1 54 -374 239 185 0 37 chr2 3397766 3397820 -249858763 - AluJ SINE Alu -169 133 82 298 270 13 19 chr2 3398018 3398177 -249858406 + (TA)n Simple_repeat Simple_repeat 2 159 0 189 74 0 0 chr2 3398177 3398204 -249858379 + (GA)n Simple_repeat Simple_repeat 2 28 0 1771 126 0 39 chr2 3399174 3399384 -249857199 + Charlie3 DNA MER1_type 1 218 -2494 2735 93 11 13 chr2 3399384 3399760 -249856823 - THE1C LTR MaLR 0 375 1 1771 126 0 39 chr2 3399760 3399944 -249856639 + Charlie3 DNA MER1_type 218 2712 0 1399 204 37 74 chr2 3400361 3400764 -249855819 - MLT1B LTR MaLR -2 388 1 439 248 7 7 chr2 3400911 3401060 -249855523 + CT-rich Low_complexity Low_complexity 4 152 0 309 294 164 36 chr2 3401273 3401711 -249854872 + L1ME4a LINE L1 5448 5941 -180 200 83 0 28 chr2 3404099 3404135 -249852448 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 19646 55 1 1 chr2 3404135 3407341 -249849242 - L1PA5 LINE L1 -24 6130 2926 207 236 83 14 chr2 3408816 3408888 -249847695 + MIR SINE MIR 48 124 -138 288 250 14 19 chr2 3408896 3409050 -249847533 - MLT1J1 LTR MaLR -11 500 237 354 321 37 21 chr2 3409206 3409393 -249847190 - MLT1J2 LTR MaLR -254 196 7 208 356 22 0 chr2 3409402 3409492 -249847091 + MIR SINE MIR 166 257 -5 21 0 0 0 chr2 3409715 3409736 -249846847 + AT_rich Low_complexity Low_complexity 1 21 0 185 238 0 0 chr2 3409891 3409933 -249846650 + MIR SINE MIR 203 244 -18 1488 229 31 3 chr2 3411211 3411564 -249845019 - MLT1A1 LTR MaLR 0 365 3 2293 70 47 3 chr2 3411717 3412015 -249844568 + AluSq SINE Alu 1 311 -2 192 40 0 0 chr2 3412267 3412292 -249844291 + (CA)n Simple_repeat Simple_repeat 1 25 0 475 266 49 21 chr2 3412341 3412484 -249844099 - MIR SINE MIR -112 150 4 280 312 14 7 chr2 3412862 3413003 -249843580 + (TCTA)n Simple_repeat Simple_repeat 3 144 0 258 273 65 79 chr2 3414820 3414959 -249841624 + MIR SINE MIR 8 144 -118 5809 143 5 4 chr2 3416527 3417447 -249839136 - L1MA5 LINE L1 0 6300 5380 339 65 0 0 chr2 3418053 3418099 -249838484 + (TG)n Simple_repeat Simple_repeat 2 47 0 269 362 7 33 chr2 3420001 3420153 -249836430 - MIR SINE MIR -113 149 2 292 335 58 29 chr2 3420249 3420422 -249836161 + MIR SINE MIR 4 181 -81 809 119 0 84 chr2 3423078 3423221 -249833362 - L1PB4 LINE L1 -1 6155 6025 1295 193 89 50 chr2 3424119 3424456 -249832127 + MLT1B LTR MaLR 4 353 -37 374 271 25 8 chr2 3424733 3424851 -249831732 - L1ME3 LINE L1 -135 6027 5908 1925 251 75 56 chr2 3424857 3425045 -249831538 - L1MEc LINE L1 -3609 2606 2423 2205 114 7 0 chr2 3425045 3425343 -249831240 - AluSx SINE Alu -12 300 1 1925 251 75 56 chr2 3425343 3426511 -249830072 - L1MEc LINE L1 -3792 2423 1265 31 0 0 0 chr2 3427704 3427735 -249828848 + AT_rich Low_complexity Low_complexity 1 31 0 603 196 227 54 chr2 3429190 3429553 -249827030 - MLT1C LTR MaLR 0 390 1 289 310 90 19 chr2 3431493 3431761 -249824822 - LTR16C LTR ERVL -18 473 187 246 128 0 0 chr2 3432049 3432088 -249824495 + (TG)n Simple_repeat Simple_repeat 2 40 0 384 305 148 24 chr2 3432158 3432368 -249824215 - MIR SINE MIR -7 255 20 230 288 0 15 chr2 3433008 3433074 -249823509 - MIR SINE MIR -176 86 22 333 235 6 41 chr2 3433417 3433587 -249822996 + GA-rich Low_complexity Low_complexity 4 167 0 505 303 109 45 chr2 3433591 3434059 -249822524 - L2 LINE L2 -1686 1628 1131 208 326 57 7 chr2 3434080 3434221 -249822362 - L2 LINE L2 -2879 435 288 243 114 0 89 chr2 3434267 3434346 -249822237 + (TAATG)n Simple_repeat Simple_repeat 4 75 0 1352 271 130 23 chr2 3434389 3435041 -249821542 - L2 LINE L2 -2381 933 212 437 194 121 40 chr2 3435049 3435173 -249821410 - MER45A DNA AcHobo -35 143 10 199 268 177 30 chr2 3435202 3435366 -249821217 - L2 LINE L2 -3091 223 36 536 144 25 8 chr2 3436289 3436407 -249820176 + CT-rich Low_complexity Low_complexity 3 122 0 225 284 211 16 chr2 3436411 3436605 -249819978 + L2 LINE L2 1607 1838 -1476 1399 262 203 41 chr2 3436705 3437255 -249819328 + L2 LINE L2 2054 2513 -800 1707 166 3 18 chr2 3437255 3437570 -249819013 - AluSx SINE Alu 0 313 3 1399 262 203 41 chr2 3437570 3438051 -249818532 + L2 LINE L2 2513 3287 -26 1992 72 103 0 chr2 3440141 3440434 -249816149 + AluSp SINE Alu 1 320 0 15668 113 82 4 chr2 3440540 3440552 -249816031 - L1P LINE L1 -2149 3997 3987 9439 93 9 2 chr2 3440552 3442594 -249813989 - L1PA7 LINE L1 -3 6466 4427 15668 113 82 4 chr2 3442594 3443937 -249812646 - L1P LINE L1 -2159 3987 2751 396 0 0 0 chr2 3443937 3443981 -249812602 + (TA)n Simple_repeat Simple_repeat 2 45 0 15668 113 82 4 chr2 3443981 3445134 -249811449 - L1P LINE L1 -3395 2751 1291 414 103 0 0 chr2 3445131 3445189 -249811394 - L1PA7 LINE L1 -6393 68 11 * 3516 197 22 3 chr2 3445179 3445890 -249810693 - L1MB1 LINE L1 -190 5978 5254 1208 214 23 7 chr2 3445895 3446194 -249810389 - L1MB1 LINE L1 -3045 3101 2798 1157 264 32 19 chr2 3446194 3446508 -249810075 + MLT1E LTR MaLR 276 593 0 239 265 15 15 chr2 3447553 3447621 -249808962 + MIR SINE MIR 82 149 -113 192 158 0 0 chr2 3448844 3448882 -249807701 + CT-rich Low_complexity Low_complexity 2 39 0 860 275 36 20 chr2 3448942 3449193 -249807390 + MIR SINE MIR 5 259 -3 348 24 0 0 chr2 3449896 3449937 -249806646 + (TG)n Simple_repeat Simple_repeat 2 42 0 1440 282 123 17 chr2 3450645 3451180 -249805403 - MLT1E LTR MaLR 0 593 2 234 241 41 123 chr2 3451443 3451613 -249804970 + L2 LINE L2 2926 3081 -191 359 247 0 7 chr2 3451658 3451812 -249804771 + (CTA)n Simple_repeat Simple_repeat 1 153 0 288 289 117 0 chr2 3451893 3452021 -249804562 - MIR SINE MIR -8 254 112 2054 118 52 17 chr2 3452105 3452452 -249804131 + L1MA5A LINE L1 5936 6294 -3 234 244 219 24 chr2 3452663 3452786 -249803797 + MIR SINE MIR 115 261 -1 276 111 0 0 chr2 3456008 3456053 -249800530 + (CA)n Simple_repeat Simple_repeat 1 45 0 1629 140 61 0 chr2 3457749 3458013 -249798570 + L1PA15 LINE L1 5880 6159 -6 2076 113 0 0 chr2 3458272 3458628 -249797955 - AluSx SINE Alu 0 356 1 1639 248 101 30 chr2 3459007 3459883 -249796700 + Charlie2a DNA MER1_type 632 1610 -1252 250 240 11 70 chr2 3459945 3460068 -249796515 - MLT1H LTR MaLR -3 621 431 41 36 0 0 chr2 3460527 3460582 -249796001 + AT_rich Low_complexity Low_complexity 1 55 0 347 120 57 34 chr2 3460591 3460766 -249795817 + (TATAA)n Simple_repeat Simple_repeat 1 179 0 25 0 0 0 chr2 3460773 3460798 -249795785 + AT_rich Low_complexity Low_complexity 1 25 0 232 97 56 14 chr2 3460818 3460890 -249795693 + (TATAA)n Simple_repeat Simple_repeat 5 79 0 33 43 0 0 chr2 3460913 3460960 -249795623 + AT_rich Low_complexity Low_complexity 1 47 0 257 250 38 50 chr2 3461295 3461375 -249795208 + MER5A DNA MER1_type 106 184 -5 187 246 211 0 chr2 3461556 3461613 -249794970 + L2 LINE L2 3233 3301 -12 997 152 5 91 chr2 3461613 3461811 -249794772 + AluJo SINE Alu 84 264 -48 2321 70 13 20 chr2 3461878 3462180 -249794403 + AluSc SINE Alu 3 302 -7 315 0 0 0 chr2 3462746 3462781 -249793802 + (CA)n Simple_repeat Simple_repeat 2 36 0 763 216 0 8 chr2 3463491 3463625 -249792958 + FLAM_A SINE Alu 1 133 0 466 252 25 0 chr2 3463855 3463974 -249792609 - Charlie8 DNA MER1_type -2250 167 46 1630 153 130 84 chr2 3464397 3464860 -249791723 - MER74A LTR ERVL -60 498 15 23 0 0 0 chr2 3466158 3466181 -249790402 + GC_rich Low_complexity Low_complexity 1 23 0 236 53 26 0 chr2 3467183 3467221 -249789362 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 1535 176 47 0 chr2 3467228 3467506 -249789077 - AluJo SINE Alu -21 291 1 307 231 15 0 chr2 3467508 3467573 -249789010 - MIR SINE MIR -106 102 37 2169 111 14 0 chr2 3468828 3469125 -249787458 + AluSx SINE Alu 1 301 -11 450 155 0 0 chr2 3469467 3469538 -249787045 + Alu SINE Alu 218 288 -22 896 236 73 45 chr2 3469548 3469947 -249786636 + L1MC5 LINE L1 7508 7917 -44 1780 221 92 25 chr2 3469967 3470532 -249786051 + L1ME3A LINE L1 5554 6156 -14 31 0 0 0 chr2 3470533 3470564 -249786019 + AT_rich Low_complexity Low_complexity 1 31 0 1150 71 0 0 chr2 3470577 3470717 -249785866 + AluSq SINE Alu 33 172 -141 514 272 70 35 chr2 3471148 3471376 -249785207 - MIR SINE MIR -10 252 17 238 138 35 69 chr2 3472139 3472197 -249784386 - MLT1C LTR MaLR -411 56 1 904 191 0 0 chr2 3472800 3472957 -249783626 + FRAM SINE Alu 5 161 -5 1854 130 0 60 chr2 3474076 3474436 -249782147 - AluSx SINE Alu 0 342 1 2238 96 0 3 chr2 3474883 3475176 -249781407 - AluSx SINE Alu -3 309 18 2013 144 3 0 chr2 3475503 3475801 -249780782 - AluSx SINE Alu -13 299 1 422 281 111 79 chr2 3475819 3476172 -249780411 - L1MC5 LINE L1 -48 7913 7550 334 257 19 9 chr2 3476345 3476450 -249780133 - L1MC4 LINE L1 -1 8041 7936 347 284 74 7 chr2 3476455 3476603 -249779980 - L1MC4 LINE L1 -196 7846 7689 468 195 85 8 chr2 3476634 3476752 -249779831 - L1MC4 LINE L1 -582 7460 7334 278 252 53 73 chr2 3476757 3476834 -249779749 - L1MC4 LINE L1 -780 7262 7188 1866 166 0 13 chr2 3476834 3477136 -249779447 + AluJb SINE Alu 2 299 -13 278 252 53 73 chr2 3477136 3477209 -249779374 - L1MC4 LINE L1 -854 7188 7115 180 0 0 0 chr2 3477335 3477355 -249779228 + (A)n Simple_repeat Simple_repeat 1 20 0 1674 126 65 51 chr2 3477903 3478197 -249778386 - AluJb SINE Alu -14 298 1 236 143 102 0 chr2 3478746 3478795 -249777788 + L2 LINE L2 3248 3301 -12 2055 102 60 0 chr2 3479339 3479622 -249776961 + AluSx SINE Alu 1 300 -12 287 313 81 0 chr2 3479624 3479723 -249776860 - L2 LINE L2 -14 3299 3193 945 184 40 0 chr2 3479961 3480189 -249776394 + L1MA4 LINE L1 6060 6296 -4 287 212 61 30 chr2 3480430 3480496 -249776087 + MIR SINE MIR 34 101 -107 287 299 118 16 chr2 3480524 3480651 -249775932 + MIR SINE MIR 93 232 -30 399 184 0 0 chr2 3481205 3481292 -249775291 + GA-rich Low_complexity Low_complexity 4 90 0 2341 104 0 3 chr2 3481351 3481660 -249774923 + AluSc SINE Alu 1 308 -1 280 266 86 40 chr2 3482033 3482358 -249774225 + L1ME4a LINE L1 5665 6015 -106 1878 221 97 34 chr2 3483593 3484178 -249772405 - MLT1E3 LTR MaLR 0 624 3 1559 171 45 42 chr2 3484323 3484633 -249771950 + AluJo SINE Alu 1 311 -1 270 0 0 0 chr2 3484767 3484797 -249771786 + (CA)n Simple_repeat Simple_repeat 1 30 0 28 48 0 0 chr2 3485173 3485215 -249771368 + AT_rich Low_complexity Low_complexity 1 42 0 510 31 0 0 chr2 3485497 3485561 -249771022 + (CA)n Simple_repeat Simple_repeat 1 64 0 2343 88 0 23 chr2 3485871 3486179 -249770404 - AluSx SINE Alu -11 301 1 196 280 70 50 chr2 3486238 3486338 -249770245 - MIR SINE MIR -133 129 28 732 315 113 5 chr2 3487676 3488057 -249768526 + MER70B LTR ERVL 4 425 -153 351 0 0 0 chr2 3488093 3488132 -249768451 + (TA)n Simple_repeat Simple_repeat 1 39 0 665 292 56 9 chr2 3488483 3488699 -249767884 + MIR SINE MIR 14 239 -23 329 241 99 1 chr2 3488918 3489040 -249767543 - MLT1H1 LTR MaLR -1 554 408 472 228 37 29 chr2 3489129 3489265 -249767318 - MER58B DNA MER1_type -1 340 204 628 308 58 31 chr2 3489352 3489612 -249766971 - MLT1H1 LTR MaLR -288 267 1 1545 231 44 20 chr2 3490177 3490628 -249765955 - MLT1C LTR MaLR 0 467 6 194 0 39 0 chr2 3490742 3490768 -249765815 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2148 119 3 19 chr2 3491082 3491393 -249765190 + AluSx SINE Alu 1 306 -6 1935 166 7 0 chr2 3491529 3491830 -249764753 - AluSx SINE Alu -9 303 1 21 0 0 0 chr2 3492093 3492114 -249764469 + AT_rich Low_complexity Low_complexity 1 21 0 370 274 85 54 chr2 3492360 3492886 -249763697 + L1ME3 LINE L1 2086 2585 -3630 1111 282 80 32 chr2 3492934 3493850 -249762733 + L1M4 LINE L1 3923 4882 -1264 296 242 33 33 chr2 3494066 3494157 -249762426 + L1MC4 LINE L1 7473 7563 -479 836 258 107 59 chr2 3494220 3495159 -249761424 + L1ME3 LINE L1 4179 5162 -1053 8176 200 42 55 chr2 3495244 3497436 -249759147 + L1MA4 LINE L1 12 2233 -5332 279 0 0 0 chr2 3497436 3497467 -249759116 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 8176 200 42 55 chr2 3497467 3497665 -249758918 + L1MA4 LINE L1 2233 2432 -5133 1604 188 3 20 chr2 3497665 3497958 -249758625 + AluJb SINE Alu 1 288 -24 8176 200 42 55 chr2 3497958 3499134 -249757449 + L1MA4 LINE L1 2432 4205 -3360 1922 189 83 8 chr2 3499136 3499532 -249757051 + MSTB LTR MaLR 1 426 0 6981 214 49 5 chr2 3499534 3501109 -249755474 + MSTB-int LTR MaLR 3 1646 -5 645 200 0 0 chr2 3501111 3501236 -249755347 + MSTA LTR MaLR 1 125 -301 1593 102 159 8 chr2 3501240 3501581 -249755002 + LTR7 LTR ERV1 1 450 0 1099 175 123 26 chr2 3501581 3501844 -249754739 + MSTA LTR MaLR 140 428 0 924 198 18 0 chr2 3501844 3502061 -249754522 + L1MA4 LINE L1 4203 4423 -3142 1423 176 56 10 chr2 3502061 3502367 -249754216 - THE1C LTR MaLR 0 375 56 260 214 29 14 chr2 3502402 3502472 -249754111 - THE1C LTR MaLR -357 71 1 10527 179 25 27 chr2 3502475 3505232 -249751351 + L1MA4 LINE L1 4422 7186 -533 2378 81 0 7 chr2 3505232 3505541 -249751042 + AluY SINE Alu 2 308 -3 10527 179 25 27 chr2 3505541 3505938 -249750645 + L1MA4 LINE L1 7186 7561 -158 1062 104 31 0 chr2 3505938 3506101 -249750482 + L1PA10 LINE L1 5999 6166 -2 10527 179 25 27 chr2 3506101 3506236 -249750347 + L1MA4 LINE L1 7561 7695 -24 33 25 0 0 chr2 3506239 3506279 -249750304 + AT_rich Low_complexity Low_complexity 1 40 0 900 268 93 55 chr2 3506412 3507250 -249749333 + L1ME3 LINE L1 5351 6229 -2 29 28 0 0 chr2 3507503 3507539 -249749044 + AT_rich Low_complexity Low_complexity 1 36 0 2734 132 144 33 chr2 3507709 3508249 -249748334 - MER4A LTR ERV1 0 600 1 273 173 73 100 chr2 3508439 3508549 -249748034 + MLT1F LTR MaLR 3 109 -433 43 76 0 0 chr2 3508723 3508815 -249747768 + AT_rich Low_complexity Low_complexity 1 92 0 2392 100 0 0 chr2 3508881 3509182 -249747401 - AluSx SINE Alu -11 301 1 185 344 11 44 chr2 3511130 3511220 -249745363 + L2 LINE L2 3186 3272 0 21 82 0 0 chr2 3511401 3511450 -249745133 + AT_rich Low_complexity Low_complexity 1 49 0 2605 205 8 2 chr2 3511450 3512045 -249744538 - L1P LINE L1 -858 5288 4698 4585 152 19 14 chr2 3512048 3512878 -249743705 + L1PA16 LINE L1 5326 6159 -7 22 0 0 0 chr2 3512882 3512904 -249743679 + AT_rich Low_complexity Low_complexity 1 22 0 1874 143 49 0 chr2 3513056 3513343 -249743240 - AluSx SINE Alu -11 301 1 1088 170 50 14 chr2 3513390 3513608 -249742975 + MER101B LTR ERV1 1 226 -344 232 208 0 69 chr2 3513807 3513879 -249742704 + MER101B LTR ERV1 471 537 -33 1278 214 25 4 chr2 3514555 3514835 -249741748 + MER101B-int LTR ERV1 1 286 -6045 888 157 6 18 chr2 3514835 3515001 -249741582 + THE1C LTR MaLR 208 371 -4 6541 158 60 10 chr2 3515004 3516488 -249740095 + THE1C-int LTR MaLR 3 1580 0 1608 166 39 65 chr2 3516488 3516873 -249739710 + THE1C LTR MaLR 1 375 0 484 145 0 0 chr2 3516873 3516949 -249739634 - HSMAR2 DNA Mariner -582 720 645 1621 198 78 16 chr2 3516991 3517374 -249739209 - MLT2C2 LTR ERVL -57 407 1 189 196 0 0 chr2 3517526 3517572 -249739011 + (TGGA)n Simple_repeat Simple_repeat 3 48 0 216 182 0 0 chr2 3517577 3517621 -249738962 + GA-rich Low_complexity Low_complexity 1 44 0 25 75 0 0 chr2 3517825 3517878 -249738705 + AT_rich Low_complexity Low_complexity 1 53 0 1541 158 55 7 chr2 3518089 3518361 -249738222 - LTR32 LTR ERVL -166 305 21 1324 287 100 22 chr2 3518486 3518988 -249737595 - MLT1F LTR MaLR -1 541 1 320 333 60 20 chr2 3520638 3520788 -249735795 + MIR SINE MIR 19 174 -88 31 26 0 0 chr2 3521533 3521571 -249735012 + AT_rich Low_complexity Low_complexity 1 38 0 11966 217 71 27 chr2 3522034 3522785 -249733798 + L1MA8 LINE L1 1061 1778 -5473 2291 110 3 0 chr2 3522785 3523094 -249733489 + AluSg SINE Alu 1 310 0 11966 217 71 27 chr2 3523094 3524328 -249732255 + L1MA8 LINE L1 1778 2957 -4294 297 0 0 0 chr2 3524328 3524361 -249732222 + (TTTA)n Simple_repeat Simple_repeat 4 36 0 1543 189 11 25 chr2 3524369 3524654 -249731929 - AluJo SINE Alu -31 281 1 11966 217 71 27 chr2 3524654 3525696 -249730887 + L1MA8 LINE L1 2963 3959 -3292 231 36 0 0 chr2 3525696 3525724 -249730859 + (TG)n Simple_repeat Simple_repeat 2 29 0 11966 217 71 27 chr2 3525724 3526228 -249730355 + L1MA8 LINE L1 3959 4440 -2811 387 0 0 0 chr2 3526228 3526271 -249730312 + (TTTA)n Simple_repeat Simple_repeat 2 44 0 2153 101 7 3 chr2 3526273 3526560 -249730023 - AluSx SINE Alu -24 288 1 11966 217 71 27 chr2 3526560 3529238 -249727345 + L1MA8 LINE L1 4440 7245 -6 477 288 22 84 chr2 3530798 3531024 -249725559 - MIR SINE MIR -21 241 30 27 81 0 0 chr2 3532060 3532122 -249724461 + AT_rich Low_complexity Low_complexity 1 62 0 286 292 15 8 chr2 3532872 3533002 -249723581 + (TA)n Simple_repeat Simple_repeat 2 132 0 255 338 23 15 chr2 3533148 3533281 -249723302 - MIR SINE MIR -108 154 21 222 303 118 17 chr2 3533375 3533494 -249723089 - MIR SINE MIR -57 151 21 231 120 101 38 chr2 3534458 3534616 -249721967 + (TATAA)n Simple_repeat Simple_repeat 5 172 0 208 167 42 24 chr2 3534619 3534787 -249721796 + (TTATA)n Simple_repeat Simple_repeat 4 174 0 22 70 0 0 chr2 3534789 3534832 -249721751 + AT_rich Low_complexity Low_complexity 1 43 0 246 174 33 16 chr2 3534893 3535014 -249721569 + (TA)n Simple_repeat Simple_repeat 1 123 0 23 33 0 0 chr2 3535019 3535049 -249721534 + AT_rich Low_complexity Low_complexity 1 30 0 218 152 53 20 chr2 3535061 3535212 -249721371 + (TTATA)n Simple_repeat Simple_repeat 4 159 0 575 171 0 0 chr2 3535233 3535344 -249721239 - L1MA4 LINE L1 -18 6282 6172 573 257 145 55 chr2 3535360 3536112 -249720471 + Charlie2 DNA MER1_type 1791 2610 -252 2269 86 0 3 chr2 3536198 3536489 -249720094 - AluSx SINE Alu -22 290 1 491 210 54 24 chr2 3536489 3536694 -249719889 + Charlie2 DNA MER1_type 2601 2811 -51 302 220 18 28 chr2 3537530 3537639 -249718944 + L1MA9 LINE L1 5983 6090 -222 21 71 0 0 chr2 3537736 3537778 -249718805 + AT_rich Low_complexity Low_complexity 1 42 0 334 297 16 16 chr2 3537872 3538054 -249718529 + HAL1 LINE L1 2044 2225 -282 735 176 0 0 chr2 3538171 3538296 -249718287 - AluJb SINE Alu -16 296 172 183 167 0 0 chr2 3538431 3538473 -249718110 + CT-rich Low_complexity Low_complexity 2 43 0 2417 88 0 0 chr2 3540012 3540317 -249716266 + AluSc SINE Alu 1 305 -4 308 260 20 103 chr2 3540430 3540576 -249716007 + L2 LINE L2 3180 3313 0 27 81 0 0 chr2 3540851 3540913 -249715670 + AT_rich Low_complexity Low_complexity 1 62 0 219 324 0 14 chr2 3540975 3541049 -249715534 + T-rich Low_complexity Low_complexity 5 77 0 2073 129 3 22 chr2 3541271 3541589 -249714994 - AluSx SINE Alu 0 312 1 2295 127 62 3 chr2 3541792 3542178 -249714405 + MLT2A2 LTR ERVL 1 409 -44 763 98 14 43 chr2 3542182 3542554 -249714029 + (TA)n Simple_repeat Simple_repeat 1 361 0 384 73 0 0 chr2 3542554 3542609 -249713974 + MLT2A2 LTR ERVL 399 453 0 1209 69 0 0 chr2 3542703 3542847 -249713736 - AluSp/q SINE Alu -9 304 161 437 135 0 0 chr2 3544290 3544364 -249712219 - L1MA7 LINE L1 0 6291 6218 1143 143 63 68 chr2 3544364 3544616 -249711967 + L1MA8 LINE L1 5619 5869 -422 198 231 0 0 chr2 3545788 3545827 -249710756 - MIR SINE MIR -107 155 117 1716 157 165 11 chr2 3546166 3546536 -249710047 - MSTA LTR MaLR -1 427 1 352 245 59 10 chr2 3549598 3549700 -249706883 - LTR40a LTR ERVL -105 414 308 361 212 186 17 chr2 3549892 3550010 -249706573 - LTR40a LTR ERVL -381 138 1 3870 204 70 7 chr2 3551096 3552073 -249704510 + L1PBa LINE L1 6 1043 -5820 402 180 50 0 chr2 3552069 3552218 -249704365 - L1PBa LINE L1 -5469 1394 1093 * 25 75 0 0 chr2 3552891 3552944 -249703639 + AT_rich Low_complexity Low_complexity 1 53 0 241 255 78 50 chr2 3553433 3553574 -249703009 + L1ME3A LINE L1 5798 5942 -228 1924 154 36 39 chr2 3554484 3554847 -249701736 + THE1B LTR MaLR 1 362 -2 765 203 20 11 chr2 3554883 3555135 -249701448 - MLT1B LTR MaLR -60 330 5 2217 78 0 0 chr2 3557990 3558319 -249698264 + AluY SINE Alu 1 329 0 206 366 41 24 chr2 3560664 3560787 -249695796 - MIR SINE MIR -118 144 20 819 307 3 27 chr2 3561216 3561545 -249695038 + L1MDa LINE L1 63 383 -6157 2539 204 76 39 chr2 3561605 3562482 -249694101 + L1MDa LINE L1 1613 2522 -4018 2557 166 144 11 chr2 3563279 3563835 -249692748 - L1PA16 LINE L1 -2 6164 5535 3390 29 0 0 chr2 3563939 3564353 -249692230 - L1PA5 LINE L1 -130 6024 5611 * 4307 220 38 36 chr2 3564349 3565570 -249691013 - L1PA16 LINE L1 -800 5346 4124 350 146 31 52 chr2 3565591 3565687 -249690896 + MLT1K LTR MaLR 491 584 -4 2351 105 13 0 chr2 3567436 3567741 -249688842 - AluSx SINE Alu -3 309 1 198 0 0 0 chr2 3568050 3568072 -249688511 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 245 330 52 10 chr2 3568824 3568921 -249687662 - L2 LINE L2 0 3272 3172 1022 69 0 7 chr2 3569070 3569215 -249687368 - L1P LINE L1 -3792 2354 2211 5067 41 3 3 chr2 3569215 3569820 -249686763 + L1PA5 LINE L1 5539 6153 -1 321 109 0 0 chr2 3570403 3570458 -249686125 + (A)n Simple_repeat Simple_repeat 1 55 0 356 203 80 129 chr2 3570462 3570625 -249685958 + L2 LINE L2 3159 3313 0 562 262 47 58 chr2 3570628 3570800 -249685783 - MIR SINE MIR -66 196 27 2302 99 0 40 chr2 3572851 3573174 -249683409 - AluSq SINE Alu -3 310 1 2118 137 45 31 chr2 3575539 3575719 -249680864 - THE1B LTR MaLR 0 364 188 2252 78 41 0 chr2 3575719 3576014 -249680569 - AluY SINE Alu -4 307 1 2118 137 45 31 chr2 3576014 3576192 -249680391 - THE1B LTR MaLR -176 188 1 842 141 88 0 chr2 3576212 3576382 -249680201 - L1MB3 LINE L1 -1 6182 5998 185 116 0 47 chr2 3576591 3576634 -249679949 + (TATATG)n Simple_repeat Simple_repeat 2 42 0 23 33 0 0 chr2 3576848 3576878 -249679705 + AT_rich Low_complexity Low_complexity 1 30 0 1103 279 42 5 chr2 3577212 3577639 -249678944 + L1MC1 LINE L1 3353 3795 -2351 1954 170 56 33 chr2 3577639 3578166 -249678417 - MLT2A2 LTR ERVL 0 554 1 1594 94 0 31 chr2 3578166 3578420 -249678163 - HERVL-A2 LTR ERVL 0 5654 5409 3428 133 68 22 chr2 3578420 3579005 -249677578 + LTR9 LTR ERV1 1 612 0 26621 171 41 46 chr2 3579026 3585987 -249670596 + HUERS-P3b LTR ERV1 22 6947 -471 800 160 11 11 chr2 3585991 3586166 -249670417 + HUERS-P3 LTR ERV1 3949 4123 -3693 540 194 8 15 chr2 3586157 3586291 -249670292 + HUERS-P3 LTR ERV1 2433 2565 -2450 * 894 111 62 0 chr2 3586445 3586589 -249669994 + HUERS-P3 LTR ERV1 8720 8872 -47 1828 166 45 24 chr2 3586589 3587056 -249669527 - MLT2A2 LTR ERVL -83 461 1 3981 236 28 21 chr2 3587061 3588345 -249668238 + L1MC1 LINE L1 3796 5088 -1058 262 270 20 30 chr2 3588363 3588463 -249668120 + MIR SINE MIR 139 237 -25 4372 171 47 39 chr2 3588487 3589663 -249666920 + L1MC1 LINE L1 5125 6310 -23 34 72 0 0 chr2 3589779 3589848 -249666735 + AT_rich Low_complexity Low_complexity 1 69 0 215 198 129 52 chr2 3589901 3589950 -249666633 - MIR SINE MIR -17 245 201 1713 178 22 73 chr2 3589950 3590361 -249666222 - MLT1B LTR MaLR 0 390 1 215 198 129 52 chr2 3590361 3590427 -249666156 - MIR SINE MIR -61 201 121 219 125 0 0 chr2 3590558 3590598 -249665985 + (CA)n Simple_repeat Simple_repeat 2 41 0 215 244 0 0 chr2 3590802 3590843 -249665740 - MER5B DNA MER1_type -132 46 6 234 0 0 0 chr2 3591440 3591466 -249665117 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 41026 34 21 2 chr2 3591466 3597491 -249659092 - L1PA3 LINE L1 -10 6145 1 198 243 229 0 chr2 3597805 3597875 -249658708 - MIR SINE MIR -6 256 171 716 321 111 14 chr2 3598741 3599099 -249657484 - L2 LINE L2 -318 2995 2606 340 191 24 0 chr2 3599475 3599559 -249657024 + (TAGA)n Simple_repeat Simple_repeat 1 86 0 673 298 108 20 chr2 3599658 3600058 -249656525 - L3 LINE CR1 -32 1545 1111 583 300 82 8 chr2 3600136 3600379 -249656204 - L2 LINE L2 -2830 484 224 297 284 39 39 chr2 3600379 3600534 -249656049 + LTR33 LTR ERVL 345 499 -22 192 259 107 71 chr2 3600763 3600875 -249655708 + L3 LINE CR1 345 460 -1117 41 21 0 0 chr2 3601251 3601299 -249655284 + AT_rich Low_complexity Low_complexity 1 48 0 276 379 73 10 chr2 3601578 3601784 -249654799 - L2 LINE L2 -721 2593 2375 358 266 32 96 chr2 3602290 3602478 -249654105 + MIR SINE MIR 35 210 -52 681 13 0 0 chr2 3603181 3603259 -249653324 + (GGAA)n Simple_repeat Simple_repeat 3 80 0 274 316 128 15 chr2 3604403 3604599 -249651984 + L1ME1 LINE L1 29 246 -6613 944 252 53 55 chr2 3604846 3605602 -249650981 + L1ME1 LINE L1 1215 1955 -4900 4455 252 105 52 chr2 3605616 3607053 -249649530 + L1ME1 LINE L1 2069 3428 -3549 2784 19 0 0 chr2 3607053 3607365 -249649218 + AluYb8 SINE Alu 1 312 -6 4455 252 105 52 chr2 3607365 3607466 -249649117 + L1ME1 LINE L1 3428 3522 -3455 2836 13 0 0 chr2 3607466 3607777 -249648806 + AluYa5 SINE Alu 1 311 0 4455 252 105 52 chr2 3607777 3608608 -249647975 + L1ME1 LINE L1 3522 4307 -2670 304 18 196 0 chr2 3608608 3608664 -249647919 - MADE1 DNA Mariner 0 80 14 4455 252 105 52 chr2 3608664 3608695 -249647888 + L1ME1 LINE L1 4307 4335 -2642 309 64 21 0 chr2 3608695 3608742 -249647841 + MADE1 DNA Mariner 31 78 -2 4455 252 105 52 chr2 3608742 3610599 -249645984 + L1ME1 LINE L1 4335 6827 -150 359 150 25 12 chr2 3610602 3610682 -249645901 + L1MB8 LINE L1 6097 6177 -1 3202 31 3 5 chr2 3610683 3611073 -249645510 + L1PA4 LINE L1 5766 6154 -1 197 339 0 0 chr2 3611186 3611242 -249645341 + MIR SINE MIR 85 140 -68 199 242 0 121 chr2 3612054 3612145 -249644438 + MIR SINE MIR 88 167 -95 305 276 48 129 chr2 3612254 3612758 -249643825 - L2 LINE L2 0 3272 2810 274 151 57 0 chr2 3613128 3613181 -249643402 - L2 LINE L2 0 3272 3217 249 191 154 29 chr2 3613430 3613566 -249643017 - L1ME4a LINE L1 -8 6113 5961 310 327 0 19 chr2 3613816 3613920 -249642663 - MIR SINE MIR -44 218 117 379 287 130 28 chr2 3613942 3614158 -249642425 - MIR SINE MIR -5 257 20 630 241 65 12 chr2 3615752 3615922 -249640661 - MER5A DNA MER1_type 0 189 11 2004 146 0 0 chr2 3615937 3616224 -249640359 - AluSx SINE Alu -25 287 1 1454 216 58 50 chr2 3616281 3616643 -249639940 - MLT1A1 LTR MaLR 0 365 1 280 292 20 119 chr2 3616914 3617116 -249639467 - MIR SINE MIR -79 183 2 191 143 20 51 chr2 3617156 3617254 -249639329 + (TA)n Simple_repeat Simple_repeat 1 95 0 208 277 0 0 chr2 3617321 3617368 -249639215 + L2 LINE L2 3200 3246 -26 181 286 208 31 chr2 3617366 3617558 -249639025 - L2 LINE L2 -2 3311 3086 * 734 197 48 69 chr2 3621105 3621293 -249635290 - MER20 DNA MER1_type 0 219 36 231 301 103 15 chr2 3621716 3621852 -249634731 - MLT1J2 LTR MaLR -20 430 283 24 0 0 0 chr2 3622036 3622060 -249634523 + AT_rich Low_complexity Low_complexity 1 24 0 2036 222 14 30 chr2 3622514 3623023 -249633560 - MLT1D LTR MaLR 0 505 5 1261 256 94 58 chr2 3623448 3624872 -249631711 + L1ME LINE L1 323 1813 -4448 321 250 100 17 chr2 3624870 3624990 -249631593 + L1M4 LINE L1 4119 4248 -1898 * 255 183 92 0 chr2 3625789 3625909 -249630674 + L1M4 LINE L1 4304 4434 -1712 555 263 98 44 chr2 3625915 3626231 -249630352 + L1ME LINE L1 1844 2176 -4085 22 0 0 0 chr2 3626973 3626995 -249629588 + AT_rich Low_complexity Low_complexity 1 22 0 878 286 119 11 chr2 3627867 3628244 -249628339 + LTR16C LTR ERVL 74 491 0 1815 254 106 89 chr2 3628385 3629544 -249627039 - MER69B DNA AcHobo -40 1186 8 230 200 0 33 chr2 3630051 3630111 -249626472 + L1MC4 LINE L1 6646 6703 -1339 593 88 0 0 chr2 3631489 3631569 -249625014 - MADE1 DNA Mariner 0 80 1 214 403 8 8 chr2 3632622 3632746 -249623837 - MIR SINE MIR -114 148 25 196 269 156 54 chr2 3633208 3633394 -249623189 + MIR SINE MIR 32 236 -26 287 340 47 0 chr2 3634416 3634522 -249622061 + MIR SINE MIR 31 141 -67 199 154 19 19 chr2 3634614 3634666 -249621917 + (TTA)n Simple_repeat Simple_repeat 3 54 0 219 277 91 130 chr2 3635301 3635709 -249620874 - L3 LINE CR1 -103 1474 1083 784 344 61 44 chr2 3636711 3637327 -249619256 + L1MEc LINE L1 802 1435 -4961 2421 117 17 6 chr2 3637327 3637687 -249618896 + THE1B LTR MaLR 1 364 0 784 344 61 44 chr2 3637687 3637825 -249618758 + L1MEc LINE L1 1435 1569 -4827 357 64 0 0 chr2 3637825 3637872 -249618711 - L1ME LINE L1 -477 5689 5643 1978 114 92 33 chr2 3637872 3638232 -249618351 + MSTA LTR MaLR 1 381 -47 337 219 27 0 chr2 3638269 3638342 -249618241 - L1ME LINE L1 -519 5647 5573 * 1142 258 35 29 chr2 3638336 3638712 -249617871 + L1ME3A LINE L1 5596 5973 -197 189 260 31 94 chr2 3639330 3639426 -249617157 + L2 LINE L2 2941 3030 -242 277 260 85 8 chr2 3641376 3641495 -249615088 - MIR SINE MIR -68 140 57 21 0 0 0 chr2 3641645 3641666 -249614917 + AT_rich Low_complexity Low_complexity 1 21 0 198 301 14 27 chr2 3642142 3642215 -249614368 + MIR SINE MIR 70 141 -121 237 246 79 44 chr2 3642258 3642372 -249614211 + MIR SINE MIR 140 257 -5 1902 157 10 3 chr2 3643686 3643992 -249612591 + AluSx SINE Alu 1 308 -4 396 283 83 21 chr2 3644159 3644304 -249612279 - MIR SINE MIR -37 225 72 907 185 67 6 chr2 3644978 3645156 -249611427 + MER5A DNA MER1_type 1 189 0 198 355 12 70 chr2 3645375 3645547 -249611036 + L2 LINE L2 2929 3090 -182 5968 177 32 37 chr2 3646156 3647299 -249609284 + L1MB1 LINE L1 3928 5062 -1106 2436 86 0 0 chr2 3647299 3647600 -249608983 - AluY SINE Alu -10 301 1 5968 177 32 37 chr2 3647600 3648622 -249607961 + L1MB1 LINE L1 5062 6087 -81 1562 206 107 28 chr2 3648629 3648932 -249607651 - MER70A LTR ERVL 0 472 130 1977 119 88 23 chr2 3648932 3649284 -249607299 + THE1C LTR MaLR 1 375 0 1562 206 107 28 chr2 3649284 3649373 -249607210 - MER70A LTR ERVL -342 130 49 1815 275 75 33 chr2 3649406 3650342 -249606241 + L1ME3A LINE L1 5188 6160 -10 200 139 13 114 chr2 3651065 3651144 -249605439 + T-rich Low_complexity Low_complexity 3 73 0 594 244 53 22 chr2 3651427 3651652 -249604931 - L1M4 LINE L1 -1498 4648 4417 2435 249 62 32 chr2 3651681 3652758 -249603825 + L1M4 LINE L1 4007 5115 -1031 1389 243 144 68 chr2 3653471 3653593 -249602990 - MLT1F1 LTR MaLR 0 567 456 2739 168 10 12 chr2 3653593 3654080 -249602503 + MER66B LTR ERV1 1 486 0 1389 243 144 68 chr2 3654080 3654484 -249602099 - MLT1F1 LTR MaLR -111 456 1 437 256 173 7 chr2 3654484 3654686 -249601897 + LTR50 LTR ERVL 272 590 -205 216 86 0 0 chr2 3654726 3654761 -249601822 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1144 90 13 0 chr2 3654762 3654918 -249601665 - LTR19A LTR ERV1 -41 445 288 566 250 114 5 chr2 3654921 3655141 -249601442 + LTR50 LTR ERVL 552 795 0 533 191 133 0 chr2 3656425 3656530 -249600053 + MLT1A2 LTR MaLR 1 119 -255 2134 96 4 0 chr2 3656681 3656953 -249599630 + AluY SINE Alu 26 298 -13 820 221 16 5 chr2 3656977 3657167 -249599416 + MLT1A2 LTR MaLR 181 372 -2 304 29 0 0 chr2 3657889 3657924 -249598659 - U2 snRNA snRNA -153 35 1 280 277 193 0 chr2 3657959 3658078 -249598505 - MIR SINE MIR -35 227 86 180 0 0 0 chr2 3658297 3658317 -249598266 + (A)n Simple_repeat Simple_repeat 1 20 0 209 268 24 37 chr2 3659642 3659724 -249596859 + L2 LINE L2 1918 1998 -1316 469 386 58 11 chr2 3659770 3660203 -249596380 + L2 LINE L2 723 1175 -2139 32 43 0 0 chr2 3660338 3660384 -249596199 + AT_rich Low_complexity Low_complexity 1 46 0 294 274 129 8 chr2 3661078 3661202 -249595381 - MIR3 SINE MIR -39 169 31 1429 181 24 38 chr2 3661866 3662158 -249594425 - AluJb SINE Alu -19 293 6 362 251 6 0 chr2 3662935 3663114 -249593469 + GA-rich Low_complexity Low_complexity 1 180 0 309 323 119 27 chr2 3663802 3664096 -249592487 - L1 LINE L1 -1318 4828 4508 21 36 0 0 chr2 3664140 3664168 -249592415 + AT_rich Low_complexity Low_complexity 1 28 0 596 294 110 30 chr2 3665722 3666157 -249590426 + L2 LINE L2 2434 2903 -411 478 321 67 30 chr2 3666164 3666432 -249590151 + HAL1 LINE L1 235 512 -1995 1217 134 19 14 chr2 3666433 3666649 -249589934 + THE1C LTR MaLR 159 375 0 10074 121 32 7 chr2 3666649 3668190 -249588393 + THE1C-int LTR MaLR 1 1580 0 2554 120 3 3 chr2 3668190 3668565 -249588018 + THE1C LTR MaLR 1 375 0 1243 246 54 31 chr2 3668616 3668965 -249587618 - MLT1A2 LTR MaLR 0 374 18 225 277 155 26 chr2 3668980 3669135 -249587448 + HAL1 LINE L1 2333 2507 0 189 325 45 57 chr2 3669250 3669407 -249587176 + L3 LINE CR1 900 1054 -523 314 255 113 19 chr2 3669456 3669562 -249587021 + MER63A DNA MER1_type 92 207 -3 183 129 0 0 chr2 3669871 3669902 -249586681 + (CA)n Simple_repeat Simple_repeat 2 32 0 182 387 84 0 chr2 3670169 3670288 -249586295 + L3 LINE CR1 1348 1476 -101 434 209 62 16 chr2 3671091 3671170 -249585413 + MLT1C LTR MaLR 1 90 -377 1253 191 38 107 chr2 3671170 3671562 -249585021 - MLT1A1 LTR MaLR 0 365 1 434 209 62 16 chr2 3671562 3671611 -249584972 + MLT1C LTR MaLR 90 135 -332 1047 197 33 44 chr2 3671627 3671779 -249584804 + MLT1C LTR MaLR 194 343 -124 1970 128 60 28 chr2 3671779 3672132 -249584451 - THE1B LTR MaLR 0 364 1 1047 197 33 44 chr2 3672132 3672253 -249584330 + MLT1C LTR MaLR 343 464 -3 368 325 145 21 chr2 3672253 3672721 -249583862 - L1 LINE L1 -1309 4837 4312 321 314 83 70 chr2 3672767 3673153 -249583430 - L1 LINE L1 -1906 4240 3850 1906 47 0 0 chr2 3673244 3673477 -249583106 + L1PA7 LINE L1 5919 6151 -3 2145 131 0 0 chr2 3673770 3674061 -249582522 + AluSx SINE Alu 1 291 -21 198 0 0 0 chr2 3674786 3674808 -249581775 + (TCTCC)n Simple_repeat Simple_repeat 5 26 0 197 331 0 66 chr2 3674811 3674932 -249581651 + L2 LINE L2 3013 3125 -188 1802 158 3 34 chr2 3674970 3675292 -249581291 + AluJb SINE Alu 1 312 0 180 0 0 0 chr2 3675829 3675849 -249580734 + (T)n Simple_repeat Simple_repeat 1 20 0 202 204 0 23 chr2 3676558 3676602 -249579981 + L2 LINE L2 3267 3309 -4 790 11 0 0 chr2 3676764 3676856 -249579727 - L1PA5 LINE L1 -270 5884 5793 1804 27 5 0 chr2 3676856 3677073 -249579510 + L1PA4 LINE L1 5935 6154 -1 681 216 14 56 chr2 3677327 3677540 -249579043 + MER3 DNA MER1_type 2 205 -4 2318 102 6 10 chr2 3677971 3678285 -249578298 + AluSq SINE Alu 1 313 0 26 0 0 0 chr2 3678361 3678387 -249578196 + AT_rich Low_complexity Low_complexity 1 26 0 768 213 26 31 chr2 3680386 3680633 -249575950 + L1MA9 LINE L1 6042 6285 -6 725 86 48 0 chr2 3681131 3681236 -249575347 - AluSg/x SINE Alu -12 298 189 193 349 77 31 chr2 3681284 3681479 -249575104 + L2 LINE L2 2565 2768 -546 2345 84 7 0 chr2 3681480 3681778 -249574805 - AluSg SINE Alu -5 305 6 21 71 0 0 chr2 3682182 3682224 -249574359 + AT_rich Low_complexity Low_complexity 1 42 0 223 304 72 0 chr2 3682507 3682576 -249574007 - MIR SINE MIR -91 171 98 338 293 136 0 chr2 3683177 3683317 -249573266 + MIR SINE MIR 103 261 -1 1657 238 41 19 chr2 3684027 3684511 -249572072 + MLT1D LTR MaLR 3 497 -8 2522 103 12 18 chr2 3684520 3684919 -249571664 + THE1B-int LTR MaLR 1184 1580 0 1945 136 14 33 chr2 3684919 3685280 -249571303 + THE1B LTR MaLR 1 354 -10 1973 266 35 38 chr2 3685286 3686124 -249570459 + MLT1D-int LTR MaLR 3 837 -534 296 229 84 0 chr2 3686136 3686219 -249570364 + L1M4 LINE L1 2638 2727 -3419 709 273 41 9 chr2 3686227 3686568 -249570015 - L1MEc LINE L1 -3558 2657 2306 * 737 247 13 31 chr2 3686561 3686788 -249569795 - L1MEc LINE L1 -6129 267 45 * 939 276 121 27 chr2 3686786 3687265 -249569318 + L1ME1 LINE L1 5593 6116 -50 1928 152 10 3 chr2 3687506 3687802 -249568781 + AluSx SINE Alu 1 298 -14 669 136 149 19 chr2 3687855 3688009 -249568574 - MSTA LTR MaLR -31 397 224 230 276 201 22 chr2 3688069 3688203 -249568380 - MIR SINE MIR -34 228 71 245 202 44 79 chr2 3688659 3688773 -249567810 + L1ME4a LINE L1 5550 5659 -462 5180 50 8 2 chr2 3688795 3689426 -249567157 + L1PA8 LINE L1 5520 6157 -15 279 0 0 0 chr2 3689426 3689457 -249567126 + (TA)n Simple_repeat Simple_repeat 2 32 0 5180 50 8 2 chr2 3689457 3689469 -249567114 + L1PA8 LINE L1 6157 6167 -5 218 357 48 0 chr2 3689591 3689675 -249566908 + L2 LINE L2 3091 3178 -94 2433 102 120 5 chr2 3690439 3690822 -249565761 + MSTA LTR MaLR 1 427 -1 2255 112 0 0 chr2 3690914 3691208 -249565375 - AluSg1 SINE Alu -15 294 1 304 256 0 26 chr2 3692658 3692736 -249563847 - MIR SINE MIR -119 143 68 452 315 164 6 chr2 3693115 3693439 -249563144 + L1ME4a LINE L1 5740 6114 -7 302 289 29 0 chr2 3693468 3693572 -249563011 - HAL1b LINE L1 -1 1347 1241 1902 158 6 16 chr2 3693577 3693888 -249562695 + AluJb SINE Alu 2 309 -3 346 287 42 75 chr2 3694310 3694575 -249562008 - L1M4 LINE L1 -2346 3800 3545 364 118 61 19 chr2 3694786 3695006 -249561577 + (TCTA)n Simple_repeat Simple_repeat 1 229 0 187 250 0 0 chr2 3695254 3695294 -249561289 + MER5A DNA MER1_type 128 167 -22 1238 145 108 0 chr2 3696264 3696505 -249560078 - L1MC1 LINE L1 -2 6331 6065 1061 268 34 54 chr2 3697329 3697863 -249558720 - MER119 DNA MER1_type -10 573 51 27 0 0 0 chr2 3697884 3697911 -249558672 + AT_rich Low_complexity Low_complexity 1 27 0 1653 163 73 12 chr2 3700283 3700626 -249555957 + MLT1A1 LTR MaLR 2 365 0 413 383 44 0 chr2 3701385 3701636 -249554947 + HERV16 LTR ERVL 1317 1578 -3418 899 317 37 24 chr2 3701667 3702603 -249553980 + HERV16 LTR ERVL 1674 2649 -2347 432 299 121 17 chr2 3702991 3703289 -249553294 - LTR16A LTR ERVL -106 344 16 341 340 95 16 chr2 3703638 3704011 -249552572 - ERVL LTR ERVL -528 4957 4674 725 225 31 0 chr2 3704012 3704172 -249552411 + MER45A DNA AcHobo 4 168 -10 2681 71 14 6 chr2 3704795 3705160 -249551423 + L1PB1 LINE L1 5777 6144 -7 46 19 0 0 chr2 3705318 3705371 -249551212 + AT_rich Low_complexity Low_complexity 1 53 0 9412 205 12 4 chr2 3705383 3707520 -249549063 - L1 LINE L1 -1777 5788 3636 5632 66 19 0 chr2 3707515 3708285 -249548298 - L1PA7 LINE L1 -1 6153 5369 * 21495 109 20 22 chr2 3708280 3712416 -249544167 - L1P3 LINE L1 -1892 4569 397 204 67 0 0 chr2 3712416 3712446 -249544137 + (CAA)n Simple_repeat Simple_repeat 2 31 0 21495 109 20 22 chr2 3712446 3712843 -249543740 - L1P3 LINE L1 -6064 397 1 11703 166 25 40 chr2 3712855 3715832 -249540751 - L1 LINE L1 -3938 3627 22 2178 96 6 13 chr2 3717230 3717543 -249539040 - AluY SINE Alu 0 311 1 370 232 111 0 chr2 3717791 3717890 -249538693 - MIR SINE MIR 0 262 153 326 221 15 0 chr2 3718551 3718619 -249537964 + L2 LINE L2 1178 1246 -2068 2093 127 0 3 chr2 3718619 3718919 -249537664 - AluSg SINE Alu -11 299 1 898 234 0 10 chr2 3718929 3719121 -249537462 - L1PB4 LINE L1 -3 6153 5964 830 168 0 0 chr2 3719137 3719256 -249537327 - FLAM_C SINE Alu -19 124 6 623 199 5 1 chr2 3719257 3719379 -249537204 - L1PB4 LINE L1 -194 5960 5835 2279 128 26 64 chr2 3719381 3719881 -249536702 - L1PB4 LINE L1 -422 5734 5254 430 109 0 0 chr2 3719895 3719959 -249536624 + L1 LINE L1 2957 3020 -3126 2140 228 11 17 chr2 3719959 3720490 -249536093 + L1 LINE L1 3327 3854 -2292 1855 300 134 50 chr2 3720492 3721887 -249534696 + L2 LINE L2 1258 2769 -545 242 263 0 84 chr2 3724105 3724200 -249532383 - MER5A DNA MER1_type -48 141 55 3430 57 40 2 chr2 3724825 3725279 -249531304 - L1PA8 LINE L1 -8 6164 5694 187 393 28 9 chr2 3726199 3726306 -249530277 + MER5A DNA MER1_type 2 110 -79 1477 128 30 8 chr2 3727150 3727384 -249529199 - MSTB1 LTR MaLR -1 431 193 23 33 0 0 chr2 3728583 3728613 -249527970 + AT_rich Low_complexity Low_complexity 1 30 0 39 0 0 0 chr2 3728912 3728951 -249527632 + AT_rich Low_complexity Low_complexity 1 39 0 214 290 48 0 chr2 3730782 3730844 -249525739 - MIR SINE MIR -100 162 98 314 250 24 12 chr2 3731020 3731104 -249525479 + L2 LINE L2 3226 3310 -3 287 319 61 52 chr2 3732074 3732303 -249524280 - MLT1K LTR MaLR -18 570 340 1412 123 21 16 chr2 3732841 3733084 -249523499 - L1MA6 LINE L1 -4 6296 6053 391 184 58 29 chr2 3733343 3733517 -249523066 + (CA)n Simple_repeat Simple_repeat 1 179 0 998 311 58 15 chr2 3733997 3734409 -249522174 - L2 LINE L2 -514 2800 2371 23 0 0 0 chr2 3735425 3735448 -249521135 + AT_rich Low_complexity Low_complexity 1 23 0 211 247 86 25 chr2 3735857 3735938 -249520645 + MIR SINE MIR 64 149 -113 496 288 29 62 chr2 3736193 3736467 -249520116 + L2 LINE L2 2200 2464 -850 1527 116 0 22 chr2 3736648 3736872 -249519711 + AluSx SINE Alu 1 219 -93 21 0 0 0 chr2 3738145 3738166 -249518417 + AT_rich Low_complexity Low_complexity 1 21 0 3642 221 20 7 chr2 3738180 3738892 -249517691 - MER44D DNA MER2_type 0 605 13 27 29 0 0 chr2 3739046 3739080 -249517503 + AT_rich Low_complexity Low_complexity 1 34 0 36 40 0 0 chr2 3739159 3739209 -249517374 + AT_rich Low_complexity Low_complexity 1 50 0 1659 256 34 34 chr2 3739238 3740118 -249516465 - L1ME1 LINE L1 -63 6103 4783 725 250 128 78 chr2 3740116 3740501 -249516082 - L1ME1 LINE L1 -1745 4401 3982 * 411 83 0 0 chr2 3740501 3740561 -249516022 + (TG)n Simple_repeat Simple_repeat 1 60 0 725 250 128 78 chr2 3740561 3740691 -249515892 - L1ME1 LINE L1 -2164 3982 3860 1623 228 19 71 chr2 3740691 3741209 -249515374 + MLT1D LTR MaLR 1 491 -14 2446 271 74 13 chr2 3741218 3742427 -249514156 - L1ME1 LINE L1 -2282 3864 2583 1173 257 136 83 chr2 3742771 3743011 -249513572 + MLT1E3 LTR MaLR 4 230 -394 1609 187 10 17 chr2 3743011 3743300 -249513283 + AluJo SINE Alu 1 287 -25 1173 257 136 83 chr2 3743300 3743647 -249512936 + MLT1E3 LTR MaLR 230 622 -2 228 305 32 7 chr2 3743706 3743860 -249512723 + L1M4 LINE L1 4533 4690 -1456 635 261 188 12 chr2 3745998 3746343 -249510240 - LTR50 LTR ERVL 0 795 390 241 238 109 30 chr2 3746346 3746447 -249510136 - LTR50 LTR ERVL -583 212 104 288 0 0 0 chr2 3746685 3746717 -249509866 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 283 313 46 28 chr2 3746939 3747156 -249509427 - LTR33 LTR ERVL 0 521 301 30 45 0 0 chr2 3747946 3747990 -249508593 + AT_rich Low_complexity Low_complexity 1 44 0 344 308 245 9 chr2 3748007 3748338 -249508245 + MLT1I LTR MaLR 1 409 0 2441 78 0 3 chr2 3748719 3749025 -249507558 + AluY SINE Alu 1 305 -6 349 329 83 23 chr2 3749228 3749444 -249507139 + MLT1J LTR MaLR 36 264 -247 183 139 0 0 chr2 3749444 3749480 -249507103 + (A)n Simple_repeat Simple_repeat 1 36 0 594 278 7 0 chr2 3749789 3749933 -249506650 + MIR SINE MIR 67 211 -51 392 386 48 21 chr2 3750208 3750545 -249506038 - L1MC/D LINE L1 -2000 5808 5463 1074 283 28 33 chr2 3750547 3750974 -249505609 + L1MCc LINE L1 14 438 -5985 1911 173 58 26 chr2 3751026 3751513 -249505070 + MLT2A2 LTR ERVL 1 516 -38 450 0 0 0 chr2 3751513 3751563 -249505020 + (TA)n Simple_repeat Simple_repeat 2 51 0 1911 173 58 26 chr2 3751563 3751604 -249504979 + MLT2A2 LTR ERVL 516 554 0 1237 276 115 15 chr2 3751828 3752564 -249504019 + L1MCc LINE L1 935 1747 -4887 368 203 183 110 chr2 3752568 3752814 -249503769 + LTR41 LTR ERVL 3 266 -507 22 0 0 0 chr2 3753152 3753174 -249503409 + AT_rich Low_complexity Low_complexity 1 22 0 729 302 38 21 chr2 3753333 3753621 -249502962 + L1MC4 LINE L1 6717 7009 -1033 307 312 110 41 chr2 3753805 3754031 -249502552 + L1MC4a LINE L1 7177 7495 -419 577 275 54 45 chr2 3754042 3754264 -249502319 - MER58A DNA MER1_type 0 224 1 230 289 0 0 chr2 3754508 3754560 -249502023 + polypurine Low_complexity Low_complexity 3 54 0 334 266 148 0 chr2 3755372 3755500 -249501083 + MIR SINE MIR 104 250 -12 1050 232 84 58 chr2 3755639 3755855 -249500728 - MLT1A2 LTR MaLR -15 359 129 2443 61 0 3 chr2 3755855 3756148 -249500435 + AluY SINE Alu 1 292 -19 1050 232 84 58 chr2 3756148 3756276 -249500307 - MLT1A2 LTR MaLR -245 129 6 546 259 96 93 chr2 3756273 3756796 -249499787 + MLT1L LTR MaLR 27 471 -40 * 224 122 24 0 chr2 3756797 3756838 -249499745 + (TG)n Simple_repeat Simple_repeat 1 42 0 190 358 15 60 chr2 3756978 3757112 -249499471 + L2 LINE L2 2880 3007 -265 329 317 145 6 chr2 3757492 3757836 -249498747 + L2 LINE L2 2547 2938 -376 348 180 16 0 chr2 3758037 3758098 -249498485 + Tigger5 DNA MER2_type 1 62 -2261 * 1073 182 10 10 chr2 3758096 3758299 -249498284 + Tigger5 DNA MER2_type 2062 2264 -59 1105 151 47 24 chr2 3758299 3758511 -249498072 - Tigger1 DNA MER2_type 0 2418 2202 936 138 0 63 chr2 3758492 3758666 -249497917 - Tigger1 DNA MER2_type -2255 163 1 * 374 180 0 0 chr2 3758666 3758727 -249497856 + Tigger5 DNA MER2_type 2263 2323 0 267 316 101 29 chr2 3758765 3758904 -249497679 + L2 LINE L2 3165 3313 0 243 329 0 12 chr2 3759122 3759207 -249497376 - L2 LINE L2 -3 3269 3186 22 35 0 0 chr2 3760388 3760417 -249496166 + AT_rich Low_complexity Low_complexity 1 29 0 233 283 58 80 chr2 3761051 3761189 -249495394 + L2 LINE L2 2619 2753 -561 31 58 0 0 chr2 3761618 3761670 -249494913 + AT_rich Low_complexity Low_complexity 1 52 0 963 151 0 0 chr2 3762151 3762502 -249494081 + (CA)n Simple_repeat Simple_repeat 2 352 0 3306 114 16 0 chr2 3762798 3763305 -249493278 + L1PA13 LINE L1 5634 6148 -15 1845 100 93 4 chr2 3763337 3763637 -249492946 + AluSx SINE Alu 1 312 0 220 273 146 64 chr2 3764289 3764399 -249492184 + L2 LINE L2 3133 3251 -21 24 0 0 0 chr2 3765509 3765533 -249491050 + AT_rich Low_complexity Low_complexity 1 24 0 3364 213 50 3 chr2 3769176 3769870 -249486713 + MER44D DNA MER2_type 1 599 -6 2157 116 0 3 chr2 3769918 3770238 -249486345 + AluSq SINE Alu 1 313 0 230 264 0 11 chr2 3770604 3770695 -249485888 + GA-rich Low_complexity Low_complexity 3 92 0 270 95 0 0 chr2 3771939 3771981 -249484602 + (TG)n Simple_repeat Simple_repeat 1 42 0 842 137 0 0 chr2 3771981 3772105 -249484478 - AluSg/x SINE Alu -33 279 156 751 67 0 29 chr2 3772612 3772716 -249483867 - AluSg1 SINE Alu -208 101 1 234 169 0 84 chr2 3772971 3773042 -249483541 - MLT1H LTR MaLR 0 549 478 693 288 45 0 chr2 3773388 3773586 -249482997 + MIR SINE MIR 56 262 0 209 185 15 0 chr2 3773588 3773653 -249482930 + (CTA)n Simple_repeat Simple_repeat 3 68 0 24 67 0 0 chr2 3773727 3773772 -249482811 + AT_rich Low_complexity Low_complexity 1 45 0 655 182 64 51 chr2 3774074 3774284 -249482299 + MLT1B LTR MaLR 173 390 0 719 230 143 15 chr2 3774475 3774740 -249481843 + MER46C DNA MER2_type 1 299 -39 271 258 44 38 chr2 3775197 3775356 -249481227 - L1MEc LINE L1 -1487 5053 4894 427 79 0 16 chr2 3775372 3775435 -249481148 + MADE1 DNA Mariner 1 62 -18 21 0 0 0 chr2 3775492 3775513 -249481070 + AT_rich Low_complexity Low_complexity 1 21 0 27 29 0 0 chr2 3775738 3775772 -249480811 + AT_rich Low_complexity Low_complexity 1 34 0 2222 109 3 0 chr2 3775908 3776211 -249480372 - AluSg SINE Alu -6 304 1 1972 151 0 0 chr2 3776217 3776521 -249480062 - AluSx SINE Alu -3 309 6 205 266 0 0 chr2 3776629 3776693 -249479890 + T-rich Low_complexity Low_complexity 1 64 0 668 311 28 21 chr2 3776720 3776983 -249479600 - L1MEc LINE L1 -2329 4211 3943 567 113 0 0 chr2 3776983 3777063 -249479520 + MADE1 DNA Mariner 1 80 0 668 311 28 21 chr2 3777063 3777188 -249479395 - L1MEc LINE L1 -2597 3943 3820 824 187 55 55 chr2 3777288 3777507 -249479076 + MER20 DNA MER1_type 1 219 0 683 260 82 86 chr2 3777521 3777752 -249478831 - L1MEc LINE L1 -2845 3695 3465 3607 146 30 8 chr2 3777752 3778408 -249478175 - L1MA8 LINE L1 0 6291 5621 683 260 82 86 chr2 3778408 3779095 -249477488 - L1MEc LINE L1 -3075 3465 2777 1490 167 53 61 chr2 3779095 3779473 -249477110 - THE1C LTR MaLR 0 375 1 8592 153 18 43 chr2 3779473 3781091 -249475492 - THE1C-int LTR MaLR 0 1580 3 1653 160 60 41 chr2 3781093 3781461 -249475122 - THE1C LTR MaLR 0 375 1 683 260 82 86 chr2 3781461 3781522 -249475061 - L1MEc LINE L1 -3763 2777 2715 1057 259 73 79 chr2 3781644 3783185 -249473398 - L1MEc LINE L1 -3918 2622 1128 214 191 0 0 chr2 3783903 3783945 -249472638 + T-rich Low_complexity Low_complexity 1 42 0 27 29 0 0 chr2 3784069 3784103 -249472480 + AT_rich Low_complexity Low_complexity 1 34 0 273 130 0 0 chr2 3784188 3784234 -249472349 - L1MEc LINE L1 -4897 1645 1600 * 1063 267 18 7 chr2 3784226 3784499 -249472084 - L1M4 LINE L1 -6108 276 1 272 346 0 0 chr2 3785097 3785201 -249471382 + CT-rich Low_complexity Low_complexity 3 106 0 363 108 0 77 chr2 3785986 3786051 -249470532 + MLT2B1 LTR ERVL 7 66 -348 638 191 0 20 chr2 3786193 3786340 -249470243 - L1MD1 LINE L1 0 6242 6099 1537 251 92 11 chr2 3786417 3786852 -249469731 - L1MEc LINE L1 -6068 472 3 22 0 0 0 chr2 3787051 3787073 -249469510 + AT_rich Low_complexity Low_complexity 1 22 0 715 140 0 0 chr2 3787112 3787219 -249469364 - AluSq/x SINE Alu -205 107 1 2306 173 28 16 chr2 3788164 3788591 -249467992 - Tigger2a DNA MER2_type 0 434 3 225 0 0 0 chr2 3789502 3789527 -249467056 + (T)n Simple_repeat Simple_repeat 1 25 0 2209 100 3 7 chr2 3789676 3789977 -249466606 - AluSx SINE Alu -12 300 1 2008 157 0 0 chr2 3790077 3790371 -249466212 + AluSg SINE Alu 1 294 -16 802 317 46 19 chr2 3790712 3791081 -249465502 + MLT1J LTR MaLR 113 491 -20 29 0 0 0 chr2 3792141 3792170 -249464413 + AT_rich Low_complexity Low_complexity 1 29 0 217 211 40 13 chr2 3792388 3792464 -249464119 + (CA)n Simple_repeat Simple_repeat 1 78 0 4134 150 37 6 chr2 3792464 3793185 -249463398 + MER49 LTR ERV1 171 914 -9 289 183 59 6 chr2 3793794 3793963 -249462620 + (TA)n Simple_repeat Simple_repeat 2 179 0 272 126 31 99 chr2 3794007 3794198 -249462385 + (TA)n Simple_repeat Simple_repeat 2 179 0 383 95 14 176 chr2 3794236 3794446 -249462137 + (TA)n Simple_repeat Simple_repeat 2 177 0 208 262 66 16 chr2 3794758 3794819 -249461764 + MIR SINE MIR 127 190 -72 32 43 0 0 chr2 3795154 3795200 -249461383 + AT_rich Low_complexity Low_complexity 1 46 0 266 197 197 70 chr2 3795423 3795456 -249461127 - MIR SINE MIR -10 252 225 928 176 88 123 chr2 3795456 3795831 -249460752 + MLT1A1 LTR MaLR 4 365 0 266 197 197 70 chr2 3795831 3795926 -249460657 - MIR SINE MIR -37 225 105 476 279 86 96 chr2 3795986 3796381 -249460202 - HAL1 LINE L1 -998 1509 1119 204 194 0 0 chr2 3796815 3796851 -249459732 + CT-rich Low_complexity Low_complexity 3 38 0 821 180 16 5 chr2 3796864 3797270 -249459313 + CT-rich Low_complexity Low_complexity 1 410 0 772 151 0 27 chr2 3797293 3797478 -249459105 + CT-rich Low_complexity Low_complexity 1 180 0 273 119 0 0 chr2 3797513 3797555 -249459028 + (TCCC)n Simple_repeat Simple_repeat 3 44 0 * 641 163 0 7 chr2 3797548 3797689 -249458894 + CT-rich Low_complexity Low_complexity 3 142 0 1076 128 0 6 chr2 3797813 3797935 -249458648 + (TTC)n Simple_repeat Simple_repeat 1 300 0 1076 128 0 6 chr2 3797935 3798115 -249458468 + (TTC)n Simple_repeat Simple_repeat 1 179 0 911 171 23 27 chr2 3798327 3798536 -249458047 - L1PA8 LINE L1 -13 6142 5937 1716 154 3 43 chr2 3798536 3798835 -249457748 + Tigger4(Zombi) DNA MER2_type 1215 1501 -1230 4478 59 10 0 chr2 3798835 3799412 -249457171 - L1PA8A LINE L1 -186 5945 5363 442 200 45 18 chr2 3799842 3799952 -249456631 - LTR37B LTR ERV1 -159 309 197 449 326 20 31 chr2 3800444 3800640 -249455943 - MER63A DNA MER1_type -16 194 1 189 302 48 56 chr2 3800749 3800875 -249455708 - MER5A DNA MER1_type -35 154 30 * 235 286 0 0 chr2 3800832 3800888 -249455695 + MER5A DNA MER1_type 128 183 -6 315 71 0 0 chr2 3801351 3801393 -249455190 + (TG)n Simple_repeat Simple_repeat 2 43 0 185 35 69 0 chr2 3802631 3802660 -249453923 + A-rich Low_complexity Low_complexity 2 32 0 480 48 0 0 chr2 3803534 3803597 -249452986 + (TG)n Simple_repeat Simple_repeat 2 64 0 21 71 0 0 chr2 3804485 3804527 -249452056 + AT_rich Low_complexity Low_complexity 1 42 0 2590 27 7 3 chr2 3806309 3806610 -249449973 - AluY SINE Alu -9 302 1 32 26 0 0 chr2 3806666 3806705 -249449878 + AT_rich Low_complexity Low_complexity 1 39 0 23 54 0 0 chr2 3807245 3807282 -249449301 + AT_rich Low_complexity Low_complexity 1 37 0 1318 192 64 20 chr2 3807980 3808277 -249448306 - AluJb SINE Alu 0 312 3 285 242 34 22 chr2 3808462 3808522 -249448061 + (TA)n Simple_repeat Simple_repeat 1 59 -121 1275 149 10 0 chr2 3808522 3808730 -249447853 + MER6B DNA MER2_type 1 210 0 285 242 34 22 chr2 3808730 3808847 -249447736 + (TA)n Simple_repeat Simple_repeat 59 180 0 276 266 50 65 chr2 3808855 3808994 -249447589 - L1ME1 LINE L1 -102 6064 5928 261 331 87 29 chr2 3808996 3809168 -249447415 + L2 LINE L2 1773 1954 -1360 272 390 89 46 chr2 3809211 3809493 -249447090 + L2 LINE L2 2948 3241 -31 21 36 0 0 chr2 3810057 3810085 -249446498 + AT_rich Low_complexity Low_complexity 1 28 0 1257 230 71 43 chr2 3810920 3811341 -249445242 + MLT1D LTR MaLR 1 433 -72 184 316 51 0 chr2 3811375 3811454 -249445129 + MIR3 SINE MIR 83 165 -43 181 322 17 17 chr2 3811482 3811541 -249445042 - L2 LINE L2 -4 3309 3251 255 79 0 0 chr2 3811861 3811899 -249444684 + (TG)n Simple_repeat Simple_repeat 2 39 0 25 0 0 0 chr2 3812134 3812159 -249444424 + AT_rich Low_complexity Low_complexity 1 25 0 340 332 118 16 chr2 3812228 3812601 -249443982 + MLT1L LTR MaLR 131 541 -74 1084 269 274 18 chr2 3813081 3813903 -249442680 - L1MC4 LINE L1 -205 7837 6806 378 230 18 9 chr2 3813908 3814021 -249442562 - L1MA4 LINE L1 -209 6091 5978 * 655 249 54 80 chr2 3814013 3814386 -249442197 - L1MC4 LINE L1 -1222 6820 6458 203 286 22 0 chr2 3815271 3815362 -249441221 + (TG)n Simple_repeat Simple_repeat 1 93 0 1001 127 0 6 chr2 3815563 3815625 -249440958 + (GGA)n Simple_repeat Simple_repeat 1 241 0 1001 127 0 6 chr2 3815625 3815806 -249440777 + (GGA)n Simple_repeat Simple_repeat 1 180 0 211 339 97 0 chr2 3816572 3816696 -249439887 - L2 LINE L2 -9 3304 3169 260 26 128 0 chr2 3816817 3816895 -249439688 + (TA)n Simple_repeat Simple_repeat 1 88 0 200 132 0 26 chr2 3817265 3817303 -249439280 + (CAAAAA)n Simple_repeat Simple_repeat 5 41 0 1873 166 27 48 chr2 3818279 3818839 -249437744 - MLT2A2 LTR ERVL 0 554 1 219 263 100 25 chr2 3818918 3818998 -249437585 - MIR SINE MIR -73 189 104 1462 196 85 24 chr2 3819330 3819671 -249436912 + MLT1A1 LTR MaLR 4 365 0 25 51 0 0 chr2 3820202 3820241 -249436342 + AT_rich Low_complexity Low_complexity 1 39 0 210 319 69 0 chr2 3820920 3820992 -249435591 + L2 LINE L2 2413 2489 -825 241 333 32 51 chr2 3821569 3821725 -249434858 + L2 LINE L2 2686 2838 -476 2220 133 30 25 chr2 3821959 3822321 -249434262 + THE1B LTR MaLR 1 364 0 259 355 44 24 chr2 3823660 3823879 -249432704 - MIR SINE MIR -26 236 17 1749 189 97 8 chr2 3823926 3824317 -249432266 - MSTA LTR MaLR 0 428 3 6613 203 107 15 chr2 3824319 3825831 -249430752 - MSTB-int LTR MaLR 0 1651 1 1949 194 65 5 chr2 3825831 3826233 -249430350 - MSTB LTR MaLR 0 426 1 1033 260 97 26 chr2 3826282 3826779 -249429804 - LTR10B LTR ERV1 0 547 16 2806 98 51 5 chr2 3827315 3827743 -249428840 + MLT2A2 LTR ERVL 1 448 -5 10254 109 4 12 chr2 3827746 3828115 -249428468 + THE1B-int LTR MaLR 5 375 -1205 1804 136 0 0 chr2 3828115 3828366 -249428217 - AluSc SINE Alu -9 300 50 10254 109 4 12 chr2 3828366 3829523 -249427060 + THE1B-int LTR MaLR 375 1519 -61 3097 99 18 14 chr2 3829524 3829966 -249426617 - MLT2A1 LTR ERVL 0 444 1 40172 87 10 2 chr2 3829967 3830400 -249426183 - HERVL-A1 LTR ERVL -1 5653 5225 236 53 26 0 chr2 3830400 3830438 -249426145 + (TTTG)n Simple_repeat Simple_repeat 2 40 0 40172 87 10 2 chr2 3830438 3835614 -249420969 - HERVL-A1 LTR ERVL -429 5225 1 3095 101 9 11 chr2 3835614 3836059 -249420524 - MLT2A1 LTR ERVL 0 444 1 448 77 0 0 chr2 3836059 3836124 -249420459 + THE1B-int LTR MaLR 1516 1580 0 2088 132 51 28 chr2 3836124 3836480 -249420103 + THE1B LTR MaLR 1 364 0 255 287 77 56 chr2 3837407 3837550 -249419033 + MIR SINE MIR 117 262 0 24 67 0 0 chr2 3839142 3839187 -249417396 + AT_rich Low_complexity Low_complexity 1 45 0 22 0 0 0 chr2 3839469 3839491 -249417092 + AT_rich Low_complexity Low_complexity 1 22 0 578 272 110 0 chr2 3839814 3840068 -249416515 - L1M4 LINE L1 -2804 3342 3061 228 306 52 31 chr2 3840124 3840317 -249416266 - L1M4 LINE L1 -3715 2431 2235 3624 185 13 46 chr2 3840339 3841237 -249415346 - L1MB3 LINE L1 -2 6181 5313 * 3664 218 63 46 chr2 3841236 3842348 -249414235 - L1MC3 LINE L1 -743 5403 5096 1869 179 0 10 chr2 3842348 3842661 -249413922 + AluJb SINE Alu 3 312 0 3664 218 63 46 chr2 3842661 3843463 -249413120 - L1MC3 LINE L1 -1050 5096 4309 1291 232 57 21 chr2 3843475 3843949 -249412634 - L1MC3 LINE L1 -2042 4104 3614 2207 85 4 0 chr2 3844055 3844381 -249412202 + AluY SINE Alu 1 327 0 376 309 49 19 chr2 3844389 3844551 -249412032 + MER5B DNA MER1_type 1 167 -11 2158 176 39 28 chr2 3846735 3847195 -249409388 + MLT1C LTR MaLR 1 465 -2 2345 244 64 26 chr2 3847411 3848280 -249408303 + L1ME2 LINE L1 5254 6155 -9 323 256 57 81 chr2 3848309 3848520 -249408063 + L1MC4 LINE L1 7829 8034 -8 491 231 144 5 chr2 3849391 3849586 -249406997 - L1MA9 LINE L1 -38 6274 6053 234 310 0 0 chr2 3851030 3851101 -249405482 + MLT1J LTR MaLR 229 299 -212 238 234 85 0 chr2 3852026 3852120 -249404463 + LTR33A LTR ERVL 408 509 -14 270 356 34 0 chr2 3853917 3854035 -249402548 + MIR SINE MIR 138 259 -3 1975 121 32 0 chr2 3854070 3854351 -249402232 - AluSc SINE Alu -4 305 16 252 340 19 19 chr2 3855721 3855827 -249400756 - MIR3 SINE MIR -88 120 15 254 364 93 0 chr2 3856082 3856222 -249400361 + MIR SINE MIR 108 260 -2 523 363 28 4 chr2 3856239 3856490 -249400093 - MIR SINE MIR 0 262 6 1547 273 99 56 chr2 3856954 3857813 -249398770 + L2 LINE L2 2153 3036 -277 1418 172 23 15 chr2 3857828 3858090 -249398493 - AluJb SINE Alu -48 264 1 552 238 166 14 chr2 3858294 3858517 -249398066 + MER69 DNA AcHobo 275 531 -695 546 265 99 7 chr2 3858627 3858778 -249397805 - MIR SINE MIR -89 173 9 297 291 72 11 chr2 3858870 3859030 -249397553 - MIR SINE MIR -63 199 32 243 133 0 0 chr2 3859945 3859990 -249396593 + (CAT)n Simple_repeat Simple_repeat 3 47 0 303 330 61 0 chr2 3862944 3863059 -249393524 - L2 LINE L2 -9 3263 3142 1634 136 42 33 chr2 3863970 3864492 -249392091 + MER50 LTR ERV1 1 729 -5 254 255 49 39 chr2 3866706 3866808 -249389775 - MIR SINE MIR -56 206 104 2117 174 58 7 chr2 3866883 3867330 -249389253 + L1MC2 LINE L1 5850 6319 -25 26 50 0 0 chr2 3867668 3867708 -249388875 + AT_rich Low_complexity Low_complexity 1 40 0 479 307 131 27 chr2 3868503 3868914 -249387669 + L1MCc LINE L1 799 1252 -5171 402 174 35 0 chr2 3868938 3869024 -249387559 + L1MCc LINE L1 2318 2657 -4285 986 273 96 25 chr2 3869029 3869985 -249386598 + L1ME1 LINE L1 1729 2697 -3518 565 241 12 48 chr2 3869985 3870151 -249386432 - FRAM SINE Alu -6 160 1 994 241 113 12 chr2 3870152 3870649 -249385934 + L1ME1 LINE L1 2916 3462 -2753 849 262 53 37 chr2 3870679 3871110 -249385473 + L1ME1 LINE L1 4143 4580 -1635 935 260 138 28 chr2 3871164 3871689 -249384894 + L1ME1 LINE L1 5327 5895 -340 237 33 0 0 chr2 3871704 3871734 -249384849 + (TA)n Simple_repeat Simple_repeat 2 31 0 530 269 54 16 chr2 3871888 3872074 -249384509 + L1ME1 LINE L1 5989 6181 -54 2291 105 3 0 chr2 3872127 3872433 -249384150 - AluSq SINE Alu -6 307 1 446 186 0 10 chr2 3873477 3873574 -249383009 + GA-rich Low_complexity Low_complexity 2 97 0 1460 196 49 63 chr2 3875590 3876018 -249380565 - L1MA8 LINE L1 -93 6198 5777 248 155 103 38 chr2 3875990 3876070 -249380513 + L1MA8 LINE L1 6207 6291 0 * 24 0 0 0 chr2 3876073 3876097 -249380486 + AT_rich Low_complexity Low_complexity 1 24 0 207 228 0 51 chr2 3876681 3876760 -249379823 + T-rich Low_complexity Low_complexity 1 75 0 225 213 0 0 chr2 3877427 3877474 -249379109 + LTR67 LTR ERVL 509 555 -2 252 0 0 0 chr2 3877846 3877874 -249378709 + (TG)n Simple_repeat Simple_repeat 1 28 0 514 268 205 0 chr2 3879154 3879359 -249377224 - MIR SINE MIR -1 261 15 560 313 131 55 chr2 3879432 3879851 -249376732 - MLT1K LTR MaLR -135 453 3 190 327 0 0 chr2 3881079 3881134 -249375449 - MIR SINE MIR -14 248 194 2198 201 13 19 chr2 3881347 3881815 -249374768 + MLT1C LTR MaLR 1 465 -2 22 0 0 0 chr2 3883785 3883807 -249372776 + AT_rich Low_complexity Low_complexity 1 22 0 560 267 56 0 chr2 3884572 3884733 -249371850 + MLT-int LTR MaLR 596 765 -970 258 215 0 0 chr2 3884779 3884844 -249371739 + MER89 LTR ERV1 30 94 -465 279 160 20 0 chr2 3884921 3884971 -249371612 - MER34 LTR ERV1 -491 51 1 252 259 62 36 chr2 3885488 3885600 -249370983 + MER117 DNA MER1_type 3 117 -80 295 322 82 14 chr2 3886451 3886743 -249369840 + L1MC3 LINE L1 3681 3992 -2154 277 257 18 9 chr2 3886767 3886880 -249369703 + (TA)n Simple_repeat Simple_repeat 1 114 0 455 264 96 44 chr2 3886921 3887171 -249369412 + L1MC3 LINE L1 4062 4324 -1822 1441 194 26 23 chr2 3887185 3887489 -249369094 - MLT1A1 LTR MaLR -7 358 54 245 263 18 0 chr2 3887489 3887546 -249369037 - MST-int LTR MaLR -540 1111 1054 2261 251 44 18 chr2 3887561 3888178 -249368405 - MLT1A1-int LTR MaLR -970 765 133 1392 143 20 29 chr2 3888178 3888347 -249368236 - MSTA LTR MaLR 0 428 260 2275 145 3 6 chr2 3888347 3888712 -249367871 + THE1B LTR MaLR 1 364 0 1392 143 20 29 chr2 3888712 3888786 -249367797 - MSTA LTR MaLR -168 260 187 886 152 20 51 chr2 3888846 3889043 -249367540 - MSTA LTR MaLR -237 191 1 765 160 15 0 chr2 3889047 3889178 -249367405 - MLT1A1-int LTR MaLR -1602 133 1 1772 174 32 12 chr2 3889179 3889519 -249367064 - MLT1A1 LTR MaLR 0 365 19 1637 210 38 0 chr2 3889994 3890341 -249366242 - MLT1A1 LTR MaLR -2 363 4 265 318 46 23 chr2 3890354 3890571 -249366012 + L1MC3 LINE L1 4379 4600 -1546 1183 261 57 46 chr2 3890726 3891414 -249365169 + L1MC3 LINE L1 5467 6146 -1664 186 43 0 0 chr2 3891414 3891437 -249365146 + (CATA)n Simple_repeat Simple_repeat 2 24 0 1183 261 57 46 chr2 3891437 3892478 -249364105 + L1MC3 LINE L1 6146 7174 -636 1804 138 4 8 chr2 3892478 3892738 -249363845 + AluSq SINE Alu 1 259 -54 1183 261 57 46 chr2 3892738 3892751 -249363832 + L1MC3 LINE L1 7174 7185 -625 222 37 0 0 chr2 3892751 3892778 -249363805 + (TAAA)n Simple_repeat Simple_repeat 2 28 0 1183 261 57 46 chr2 3892778 3893433 -249363150 + L1MC3 LINE L1 7185 7800 -10 290 154 66 55 chr2 3893631 3893722 -249362861 + L1ME3A LINE L1 6071 6162 -8 1784 178 3 0 chr2 3893734 3894027 -249362556 + AluJb SINE Alu 3 296 -16 5143 40 11 2 chr2 3894407 3895037 -249361546 - L1PA5 LINE L1 -4 6150 5515 365 239 0 22 chr2 3895182 3895274 -249361309 + L1MC4 LINE L1 6614 6703 -1339 382 102 87 0 chr2 3895277 3895404 -249361179 + (TA)n Simple_repeat Simple_repeat 1 138 0 1496 70 4 48 chr2 3895580 3895591 -249360992 - L1PA11 LINE L1 0 6174 6164 2234 92 0 22 chr2 3895591 3895906 -249360677 - AluSp SINE Alu -2 311 4 1496 70 4 48 chr2 3895906 3896124 -249360459 - L1PA11 LINE L1 -10 6164 5955 587 153 38 0 chr2 3896713 3896832 -249359751 - MLT1D LTR MaLR 0 505 396 318 26 0 0 chr2 3897658 3897697 -249358886 + (CA)n Simple_repeat Simple_repeat 2 40 0 273 330 21 0 chr2 3897770 3897864 -249358719 + L3 LINE CR1 790 885 -692 21 0 0 0 chr2 3898816 3898837 -249357746 + AT_rich Low_complexity Low_complexity 1 21 0 25 0 0 0 chr2 3900140 3900165 -249356418 + AT_rich Low_complexity Low_complexity 1 25 0 252 0 0 0 chr2 3900434 3900462 -249356121 + (TTTTTG)n Simple_repeat Simple_repeat 2 29 0 249 180 0 0 chr2 3900839 3900889 -249355694 + GA-rich Low_complexity Low_complexity 3 52 0 25 0 0 0 chr2 3901188 3901213 -249355370 + AT_rich Low_complexity Low_complexity 1 25 0 198 297 103 32 chr2 3902208 3902363 -249354220 + MIR SINE MIR 47 212 -50 234 0 0 0 chr2 3903827 3903853 -249352730 + (TG)n Simple_repeat Simple_repeat 1 26 0 251 263 13 40 chr2 3903859 3903935 -249352648 - MIR SINE MIR -115 147 74 443 296 100 71 chr2 3903985 3904265 -249352318 - L2 LINE L2 0 3313 3026 1387 253 31 14 chr2 3904615 3905038 -249351545 + MER63B DNA MER1_type 7 436 0 1508 43 5 0 chr2 3907410 3907598 -249348985 - AluY SINE Alu -4 307 119 29 0 0 0 chr2 3907708 3907737 -249348846 + AT_rich Low_complexity Low_complexity 1 29 0 26 74 0 0 chr2 3908293 3908347 -249348236 + AT_rich Low_complexity Low_complexity 1 54 0 21 36 0 0 chr2 3908369 3908397 -249348186 + AT_rich Low_complexity Low_complexity 1 28 0 191 402 12 12 chr2 3908489 3908571 -249348012 - MIR SINE MIR -161 101 20 3211 210 94 25 chr2 3908701 3909487 -249347096 - MER21B LTR ERV1 -11 852 13 193 320 154 0 chr2 3909491 3909569 -249347014 + L2 LINE L2 3164 3253 -19 3497 111 83 12 chr2 3909828 3910421 -249346162 - LTR24C LTR ERV1 0 635 1 5036 126 29 21 chr2 3910689 3911552 -249345031 - MER4D LTR ERV1 -2 870 1 2574 58 0 0 chr2 3911586 3911897 -249344686 + AluY SINE Alu 1 311 0 1404 277 25 11 chr2 3911963 3912407 -249344176 + Charlie1a DNA MER1_type 1 450 -1005 450 286 19 33 chr2 3912407 3912617 -249343966 + L1ME LINE L1 4574 4780 -1366 2904 143 24 24 chr2 3912649 3912769 -249343814 - MLT2A1 LTR ERVL 0 515 396 279 0 0 0 chr2 3912769 3912800 -249343783 + (TA)n Simple_repeat Simple_repeat 1 31 0 2904 143 24 24 chr2 3912800 3913186 -249343397 - MLT2A1 LTR ERVL -119 396 1 922 249 46 92 chr2 3913190 3913539 -249343044 - MLT1A2 LTR MaLR -21 353 21 904 178 51 0 chr2 3913557 3913714 -249342869 - MER72 LTR ERV1 -557 165 1 373 345 65 50 chr2 3913714 3914036 -249342547 + L1ME LINE L1 4966 5292 -854 240 254 17 0 chr2 3914093 3914152 -249342431 + GA-rich Low_complexity Low_complexity 1 60 0 297 341 75 26 chr2 3914191 3914575 -249342008 + L1ME LINE L1 5457 5859 -311 340 104 0 0 chr2 3914678 3914726 -249341857 - AluY SINE Alu -218 82 35 764 189 7 0 chr2 3914749 3914900 -249341683 - MLT1A2 LTR MaLR 0 390 237 182 387 32 8 chr2 3915014 3915138 -249341445 + MIR3 SINE MIR 14 140 -68 29 28 0 0 chr2 3915720 3915756 -249340827 + AT_rich Low_complexity Low_complexity 1 36 0 183 80 0 0 chr2 3916037 3916062 -249340521 + (TTTTG)n Simple_repeat Simple_repeat 5 29 0 363 271 66 36 chr2 3916083 3916249 -249340334 - L1ME LINE L1 -382 5739 5569 208 287 278 9 chr2 3916328 3916443 -249340140 + MER5A DNA MER1_type 44 189 0 346 303 10 0 chr2 3917131 3917230 -249339353 - MER5A DNA MER1_type -80 109 10 234 281 70 126 chr2 3917396 3917595 -249338988 + MIR SINE MIR 3 190 -72 2023 138 7 0 chr2 3919084 3919382 -249337201 + AluSx SINE Alu 2 301 -11 1870 118 47 4 chr2 3919860 3920139 -249336444 + AluSx SINE Alu 1 291 -21 464 254 114 55 chr2 3920156 3920214 -249336369 - MIR SINE MIR -2 260 207 252 86 0 0 chr2 3920214 3920249 -249336334 + (CA)n Simple_repeat Simple_repeat 2 36 0 464 254 114 55 chr2 3920249 3920426 -249336157 - MIR SINE MIR -55 207 11 28 0 0 0 chr2 3921564 3921592 -249334991 + AT_rich Low_complexity Low_complexity 1 28 0 185 298 48 0 chr2 3921748 3921832 -249334751 - L2 LINE L2 -2882 432 345 2272 256 44 50 chr2 3922433 3923091 -249333492 - L1MD3 LINE L1 -13 8400 7769 2812 6 0 10 chr2 3923091 3923404 -249333179 + AluY SINE Alu 1 310 -1 2272 256 44 50 chr2 3923404 3923592 -249332991 - L1MD3 LINE L1 -644 7769 7581 3351 138 27 0 chr2 3923595 3924317 -249332266 + L1P5 LINE L1 5053 5791 -360 219 114 0 0 chr2 3924323 3924358 -249332225 + (TA)n Simple_repeat Simple_repeat 2 36 0 263 104 0 21 chr2 3924361 3924409 -249332174 + L1P5 LINE L1 5784 5830 -321 2510 115 0 0 chr2 3924558 3924922 -249331661 + L1PB1 LINE L1 5788 6151 0 4379 248 75 43 chr2 3924929 3925054 -249331529 - L1MD3 LINE L1 -757 5807 5687 1382 213 10 30 chr2 3925054 3925350 -249331233 - AluJb SINE Alu -22 290 1 4379 248 75 43 chr2 3925350 3926653 -249329930 - L1MD3 LINE L1 -877 5687 6055 966 8 24 0 chr2 3926653 3926776 -249329807 + (TCTA)n Simple_repeat Simple_repeat 3 128 0 4379 248 75 43 chr2 3926776 3927503 -249329080 - L1MD3 LINE L1 -508 6056 5354 288 214 0 0 chr2 3927503 3927559 -249329024 - L1 LINE L1 -1329 5235 5180 25 31 0 0 chr2 3927575 3927607 -249328976 + AT_rich Low_complexity Low_complexity 1 32 0 6470 141 9 9 chr2 3927611 3929049 -249327534 - L1MA3 LINE L1 -1 7723 6287 * 9724 181 23 13 chr2 3929041 3930756 -249325827 - L1MA3 LINE L1 -5821 1744 13 4693 234 39 6 chr2 3930763 3932032 -249324551 - L1 LINE L1 -1364 6201 4892 285 200 0 17 chr2 3932030 3932090 -249324493 - L1M4c LINE L1 -6320 64 6 * 1405 291 43 33 chr2 3932075 3932885 -249323698 - L1MD3 LINE L1 -2181 4383 3566 238 125 18 36 chr2 3933521 3933577 -249323006 - L1MCc LINE L1 -6105 318 264 340 283 25 69 chr2 3933617 3933776 -249322807 - L1MD3 LINE L1 -5889 156 5 10287 90 5 16 chr2 3934021 3935797 -249320786 + L1P3 LINE L1 3875 5643 -511 298 38 0 113 chr2 3935796 3935849 -249320734 + L1PA7 LINE L1 6108 6154 0 * 391 244 41 32 chr2 3936913 3937036 -249319547 + MER5B DNA MER1_type 1 124 -54 375 23 0 0 chr2 3937161 3937205 -249319378 + (TG)n Simple_repeat Simple_repeat 1 44 0 1242 233 66 3 chr2 3937762 3938067 -249318516 + MLT1A1 LTR MaLR 1 324 -41 222 383 28 0 chr2 3938096 3938203 -249318380 + MIR SINE MIR 34 143 -65 202 307 93 21 chr2 3938398 3938538 -249318045 + L2 LINE L2 2671 2820 -494 355 333 32 43 chr2 3938584 3938770 -249317813 + MIR SINE MIR 8 191 -71 3073 223 55 43 chr2 3939251 3939941 -249316642 - L1MB5 LINE L1 -8 6166 5486 940 227 44 86 chr2 3939941 3940350 -249316233 - MSTD LTR MaLR 0 396 5 3073 223 55 43 chr2 3940350 3941357 -249315226 - L1MB5 LINE L1 -688 5486 4442 322 344 56 8 chr2 3943170 3943295 -249313288 + L2 LINE L2 3142 3272 0 312 262 76 81 chr2 3943367 3943577 -249313006 + L2 LINE L2 3101 3309 -4 453 293 6 17 chr2 3944736 3944917 -249311666 + C-rich Low_complexity Low_complexity 2 180 0 403 80 0 0 chr2 3945081 3945131 -249311452 - MER51B LTR ERV1 0 377 328 876 224 9 39 chr2 3945134 3945366 -249311217 - L1ME LINE L1 -370 6294 6070 523 272 76 31 chr2 3945372 3945596 -249310987 - MER2 DNA MER2_type -8 337 104 292 93 0 0 chr2 3945626 3945669 -249310914 + MADE1 DNA Mariner 38 80 0 486 217 47 9 chr2 3945678 3945784 -249310799 - MER2 DNA MER2_type -234 111 2 402 158 40 59 chr2 3945787 3945888 -249310695 - L1ME LINE L1 -610 6072 5974 725 141 0 8 chr2 3945888 3946016 -249310567 + (TTCC)n Simple_repeat Simple_repeat 3 129 0 3069 267 40 62 chr2 3946026 3947977 -249308606 - L1ME LINE L1 -743 5901 4067 607 291 36 40 chr2 3948061 3948536 -249308047 - L1ME LINE L1 -5195 1347 875 180 0 0 0 chr2 3948540 3948560 -249308023 + (TG)n Simple_repeat Simple_repeat 2 21 0 1923 178 15 3 chr2 3948560 3948902 -249307681 - MER7A DNA MER2_type -1 345 2 303 340 118 30 chr2 3948969 3949298 -249307285 - L1ME LINE L1 -5667 875 518 267 269 15 60 chr2 3949491 3949625 -249306958 - L1ME LINE L1 -6316 226 99 12859 160 43 11 chr2 3949879 3952223 -249304360 + Tigger1 DNA MER2_type 1 2418 0 285 326 11 42 chr2 3954113 3954253 -249302330 + MIR SINE MIR 2 139 -69 186 238 63 32 chr2 3954625 3954688 -249301895 + L3 LINE CR1 1479 1543 -34 247 280 140 11 chr2 3954713 3954806 -249301777 + L2 LINE L2 3199 3303 -10 457 139 40 0 chr2 3955036 3955137 -249301446 + (TATG)n Simple_repeat Simple_repeat 2 106 0 22 0 0 0 chr2 3955405 3955427 -249301156 + AT_rich Low_complexity Low_complexity 1 22 0 186 43 0 0 chr2 3956106 3956129 -249300454 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1886 176 3 0 chr2 3956767 3957069 -249299514 - AluJb SINE Alu -9 303 1 873 103 5 43 chr2 3957506 3957691 -249298892 + (GGAA)n Simple_repeat Simple_repeat 2 179 0 2328 97 0 3 chr2 3959416 3959725 -249296858 - AluSc SINE Alu -1 308 1 207 88 0 0 chr2 3960034 3960068 -249296515 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 233 254 0 0 chr2 3961230 3961289 -249295294 + MLT1K LTR MaLR 530 588 0 392 118 65 30 chr2 3961788 3961957 -249294626 + (TA)n Simple_repeat Simple_repeat 2 176 0 236 201 25 19 chr2 3961960 3962119 -249294464 + (TTATA)n Simple_repeat Simple_repeat 5 164 0 3276 55 19 3 chr2 3962227 3962772 -249293811 - L1P2 LINE L1 -431 5723 5171 1333 203 103 29 chr2 3963651 3963991 -249292592 - MLT1A1 LTR MaLR 0 365 1 349 212 0 50 chr2 3964270 3964368 -249292215 - MIR SINE MIR -64 144 68 591 183 25 0 chr2 3964735 3964855 -249291728 + MER58B DNA MER1_type 219 341 0 245 321 119 8 chr2 3966398 3966532 -249290051 + L2 LINE L2 3164 3312 -1 22 0 0 0 chr2 3966541 3966563 -249290020 + AT_rich Low_complexity Low_complexity 1 22 0 2501 68 0 3 chr2 3967004 3967314 -249289269 - AluY SINE Alu -2 309 1 4168 29 0 0 chr2 3967542 3968031 -249288552 + L1PA4 LINE L1 5664 6152 -3 1804 223 10 83 chr2 3968227 3968814 -249287769 + MER52A LTR ERV1 1207 1750 -5 1438 247 5 27 chr2 3968819 3969188 -249287395 + MLT1A1 LTR MaLR 3 363 -2 428 239 0 0 chr2 3969969 3970061 -249286522 - MIR3 SINE MIR -14 194 103 353 376 65 0 chr2 3971155 3971325 -249285258 + MIR SINE MIR 9 189 -73 299 65 22 0 chr2 3971666 3971712 -249284871 + (TC)n Simple_repeat Simple_repeat 2 48 0 327 136 0 0 chr2 3971748 3971807 -249284776 + (TGGA)n Simple_repeat Simple_repeat 3 61 0 418 231 115 13 chr2 3972354 3972510 -249284073 - MLT1K LTR MaLR -32 556 385 1090 215 88 61 chr2 3972730 3972763 -249283820 - MLT2D LTR ERVL -6 408 377 297 0 0 0 chr2 3972763 3972796 -249283787 + (TG)n Simple_repeat Simple_repeat 1 33 0 1090 215 88 61 chr2 3972796 3972807 -249283776 - MLT2D LTR ERVL -37 377 368 186 43 0 0 chr2 3972807 3972830 -249283753 + (GA)n Simple_repeat Simple_repeat 2 24 0 1090 215 88 61 chr2 3972830 3973105 -249283478 - MLT2D LTR ERVL -46 368 72 1808 144 28 0 chr2 3973105 3973389 -249283194 - AluSg SINE Alu -12 298 7 1090 215 88 61 chr2 3973389 3973463 -249283120 - MLT2D LTR ERVL -342 72 2 207 139 0 0 chr2 3973575 3973611 -249282972 + (CA)n Simple_repeat Simple_repeat 2 37 0 221 237 0 13 chr2 3974257 3974333 -249282250 + GA-rich Low_complexity Low_complexity 3 77 0 233 272 224 8 chr2 3974698 3974823 -249281760 - MIR SINE MIR -11 251 100 396 0 0 0 chr2 3975240 3975284 -249281299 + (CA)n Simple_repeat Simple_repeat 2 45 0 246 136 0 0 chr2 3975899 3975943 -249280640 + (TG)n Simple_repeat Simple_repeat 1 44 0 226 250 190 40 chr2 3976795 3976895 -249279688 + L2 LINE L2 3158 3272 0 2038 127 3 0 chr2 3977111 3977415 -249279168 + AluSx SINE Alu 1 305 0 243 264 77 0 chr2 3977520 3977611 -249278972 + L1ME LINE L1 86 183 -5887 1790 262 90 43 chr2 3977748 3978836 -249277747 + L1M4 LINE L1 3696 4834 -1312 908 249 49 42 chr2 3978849 3979167 -249277416 + L1ME LINE L1 3975 4298 -1782 2612 46 0 0 chr2 3979167 3979469 -249277114 - AluY SINE Alu -9 302 1 908 249 49 42 chr2 3979469 3979579 -249277004 + L1ME LINE L1 4298 4406 -1674 337 265 90 11 chr2 3979563 3979831 -249276752 + L1ME LINE L1 4957 5245 -835 * 555 271 16 0 chr2 3979905 3980154 -249276429 + L1ME LINE L1 5259 5605 -450 1749 178 35 22 chr2 3980460 3980830 -249275753 - THE1C LTR MaLR 0 375 1 315 349 84 21 chr2 3980985 3981223 -249275360 - MIR SINE MIR -9 253 1 245 345 12 0 chr2 3981360 3981444 -249275139 - L3 LINE CR1 -346 1231 1147 24 0 0 0 chr2 3982495 3982519 -249274064 + AT_rich Low_complexity Low_complexity 1 24 0 187 240 20 20 chr2 3982858 3982908 -249273675 - MIR SINE MIR -63 199 150 6313 93 12 1 chr2 3983719 3984700 -249271883 + L1PA8 LINE L1 5175 6165 -7 240 301 108 0 chr2 3984817 3984910 -249271673 - MIR SINE MIR -35 227 125 199 317 131 7 chr2 3985138 3985283 -249271300 - MIR SINE MIR -37 225 63 33 0 0 0 chr2 3986033 3986066 -249270517 + AT_rich Low_complexity Low_complexity 1 33 0 390 42 0 0 chr2 3989050 3989098 -249267485 + (CAATT)n Simple_repeat Simple_repeat 2 49 0 40462 34 27 1 chr2 3989435 3995430 -249261153 + L1PA2 LINE L1 1 6154 -1 2187 139 0 0 chr2 3997525 3997826 -249258757 - AluSx SINE Alu -9 303 3 246 242 180 31 chr2 3998903 3999031 -249257552 - MIR SINE MIR 0 262 116 336 48 0 0 chr2 3999754 3999796 -249256787 + (TG)n Simple_repeat Simple_repeat 2 43 0 234 292 43 31 chr2 4002321 4002482 -249254101 - L1ME LINE L1 -312 5858 5696 275 303 18 9 chr2 4003125 4003234 -249253349 - L1ME LINE L1 -513 5651 5542 272 288 30 0 chr2 4003236 4003368 -249253215 - L1ME LINE L1 -710 5454 5319 403 262 153 49 chr2 4003403 4004177 -249252406 - L1ME LINE L1 -816 5330 4477 792 298 40 3 chr2 4004362 4004688 -249251895 + LTR53 LTR ERVL 49 386 -133 1216 204 17 3 chr2 4004699 4004993 -249251590 - L1P LINE L1 -964 5182 4885 180 26 53 26 chr2 4004999 4005037 -249251546 + (CAAAA)n Simple_repeat Simple_repeat 2 40 0 1335 188 21 77 chr2 4005278 4005708 -249250875 + LTR52 LTR ERVL 13 418 -3 611 252 107 22 chr2 4005712 4006030 -249250553 - L1M4 LINE L1 -551 5633 5289 * 967 230 48 79 chr2 4006024 4006424 -249250159 - L1M4 LINE L1 -789 5357 4973 1860 191 5 0 chr2 4006424 4006802 -249249781 - L1MB2 LINE L1 -2 6169 5790 967 230 48 79 chr2 4006802 4006896 -249249687 - L1M4 LINE L1 -1173 4973 4878 364 273 7 56 chr2 4008113 4008256 -249248327 - L2 LINE L2 -203 3069 2934 218 397 94 21 chr2 4008299 4008533 -249248050 - L2 LINE L2 -459 2855 2605 225 287 66 37 chr2 4009168 4009304 -249247279 + MIR SINE MIR 122 261 -1 219 232 0 0 chr2 4009794 4009850 -249246733 + (TTCA)n Simple_repeat Simple_repeat 1 56 0 1984 153 0 0 chr2 4010560 4010855 -249245728 - AluSx SINE Alu -15 297 3 373 273 105 14 chr2 4011983 4012126 -249244457 - L2 LINE L2 0 3313 3158 198 0 0 0 chr2 4012231 4012253 -249244330 + (TG)n Simple_repeat Simple_repeat 1 22 0 792 297 20 28 chr2 4012376 4012625 -249243958 - MIR SINE MIR -4 258 12 227 337 18 49 chr2 4013191 4013354 -249243229 + L2 LINE L2 2933 3090 -182 349 268 52 64 chr2 4013994 4014244 -249242339 - L1ME LINE L1 -312 5809 5563 22 88 0 0 chr2 4016619 4016676 -249239907 + AT_rich Low_complexity Low_complexity 1 57 0 373 251 53 68 chr2 4017427 4017728 -249238855 + L1MDb LINE L1 1191 1526 -5061 270 0 0 0 chr2 4017781 4017811 -249238772 + (CA)n Simple_repeat Simple_repeat 2 31 0 484 312 80 0 chr2 4018709 4018959 -249237624 + L1M4 LINE L1 1344 1613 -5246 955 246 90 52 chr2 4018982 4019426 -249237157 + L1M4 LINE L1 5633 6093 -864 820 205 12 89 chr2 4019434 4019692 -249236891 - LTR12 LTR ERV1 -239 475 238 8703 187 68 30 chr2 4020503 4022194 -249234389 + MER52A LTR ERV1 1 1755 0 202 200 0 0 chr2 4023216 4023256 -249233327 + MIR SINE MIR 185 224 -38 261 75 0 0 chr2 4023257 4023297 -249233286 + (GA)n Simple_repeat Simple_repeat 2 41 0 2346 100 3 0 chr2 4023473 4023773 -249232810 - AluSq SINE Alu -12 301 1 1826 188 6 6 chr2 4024003 4024354 -249232229 + L1 LINE L1 4410 4760 -1386 898 178 77 6 chr2 4024359 4024528 -249232055 - MLT1B LTR MaLR -202 188 8 262 274 264 0 chr2 4024618 4024724 -249231859 + L2 LINE L2 3180 3313 0 253 226 39 29 chr2 4025710 4025812 -249230771 + (CA)n Simple_repeat Simple_repeat 2 104 0 292 207 33 20 chr2 4025824 4025974 -249230609 + (CA)n Simple_repeat Simple_repeat 1 152 0 342 312 11 58 chr2 4026028 4026217 -249230366 + (CACG)n Simple_repeat Simple_repeat 1 180 0 * 442 261 6 30 chr2 4026097 4026262 -249230321 + (CA)n Simple_repeat Simple_repeat 1 161 0 306 333 0 0 chr2 4027667 4027775 -249228808 - MIR3 SINE MIR -8 200 93 245 185 15 31 chr2 4027924 4027989 -249228594 - MLT1E1 LTR MaLR -440 214 151 545 83 12 60 chr2 4027998 4028082 -249228501 - MADE1 DNA Mariner 0 80 1 378 61 0 0 chr2 4028200 4028249 -249228334 + (CA)n Simple_repeat Simple_repeat 2 50 0 411 333 15 0 chr2 4028621 4028753 -249227830 + L2 LINE L2 3136 3269 -3 563 329 118 34 chr2 4028894 4029260 -249227323 - L1MEc LINE L1 -4212 2184 1759 2256 92 0 0 chr2 4029260 4029544 -249227039 - AluSx SINE Alu -28 284 1 563 329 118 34 chr2 4029544 4029703 -249226880 - L1MEc LINE L1 -4637 1759 1615 21 0 0 0 chr2 4031233 4031254 -249225329 + AT_rich Low_complexity Low_complexity 1 21 0 723 222 28 113 chr2 4031341 4031661 -249224922 + MLT1C LTR MaLR 34 326 -141 331 282 139 19 chr2 4031927 4032193 -249224390 - HAL1b LINE L1 -21 1327 1030 383 276 173 28 chr2 4032218 4032472 -249224111 - HAL1b LINE L1 -523 825 535 489 272 51 0 chr2 4032524 4032682 -249223901 - HAL1b LINE L1 -701 647 482 254 329 0 0 chr2 4032788 4032864 -249223719 + CT-rich Low_complexity Low_complexity 3 78 0 1399 238 16 53 chr2 4033093 4033430 -249223153 + MLT2D LTR ERVL 50 373 -41 330 26 0 0 chr2 4033430 4033469 -249223114 + (CA)n Simple_repeat Simple_repeat 2 40 0 1399 238 16 53 chr2 4033469 4033510 -249223073 + MLT2D LTR ERVL 373 414 0 254 325 40 32 chr2 4035016 4035142 -249221441 + MIR SINE MIR 100 226 -36 1854 200 74 32 chr2 4035160 4035540 -249221043 - MSTD LTR MaLR 0 396 1 1828 192 61 0 chr2 4035545 4035905 -249220678 + MSTC LTR MaLR 4 385 -43 2041 224 41 5 chr2 4035905 4036316 -249220267 - MSTB LTR MaLR 0 426 1 2317 199 68 11 chr2 4036324 4036796 -249219787 - MSTB-int LTR MaLR -15 1636 1138 820 159 7 21 chr2 4037503 4037648 -249218935 + FLAM_C SINE Alu 1 143 0 1698 152 17 30 chr2 4037652 4037954 -249218629 + AluJb SINE Alu 1 298 -14 594 194 0 0 chr2 4038190 4038293 -249218290 - FLAM_C SINE Alu -39 104 2 25 31 0 0 chr2 4038801 4038833 -249217750 + AT_rich Low_complexity Low_complexity 1 32 0 29 78 0 0 chr2 4038933 4038997 -249217586 + AT_rich Low_complexity Low_complexity 1 64 0 289 281 99 9 chr2 4039233 4039367 -249217216 + L1ME LINE L1 11 442 -5954 201 74 0 0 chr2 4039556 4039583 -249217000 + (A)n Simple_repeat Simple_repeat 1 27 0 2158 114 0 25 chr2 4039903 4040220 -249216363 - AluY SINE Alu -2 309 1 21 0 0 0 chr2 4040229 4040250 -249216333 + AT_rich Low_complexity Low_complexity 1 21 0 1971 148 3 7 chr2 4040252 4040557 -249216026 - AluSx SINE Alu -8 304 1 674 103 0 0 chr2 4040583 4040670 -249215913 + AluS SINE Alu 1 87 -226 2097 75 8 0 chr2 4040884 4041150 -249215433 - AluSp SINE Alu -45 268 1 801 142 0 8 chr2 4041193 4041320 -249215263 + FLAM_C SINE Alu 13 138 -5 286 293 38 57 chr2 4041320 4041426 -249215157 + L2 LINE L2 3198 3301 -12 1437 169 0 4 chr2 4041426 4041657 -249214926 + AluSx SINE Alu 1 230 -82 246 316 26 0 chr2 4041709 4041785 -249214798 - MIR SINE MIR -138 124 47 970 195 0 26 chr2 4042158 4042348 -249214235 + AluJo SINE Alu 1 185 -127 180 97 0 0 chr2 4042637 4042668 -249213915 + (G)n Simple_repeat Simple_repeat 1 31 0 2255 113 0 0 chr2 4043049 4043349 -249213234 - AluSx SINE Alu -12 300 1 24 0 0 0 chr2 4043609 4043633 -249212950 + AT_rich Low_complexity Low_complexity 1 24 0 234 128 0 0 chr2 4043889 4043928 -249212655 + (CA)n Simple_repeat Simple_repeat 2 40 0 1946 138 10 3 chr2 4045921 4046212 -249210371 + AluSx SINE Alu 3 295 -17 25 0 0 0 chr2 4046214 4046239 -249210344 + AT_rich Low_complexity Low_complexity 1 25 0 472 273 67 7 chr2 4046387 4046537 -249210046 - MIR SINE MIR -14 248 90 503 108 0 27 chr2 4046537 4046611 -249209972 + AluS SINE Alu 2 73 -240 215 320 31 10 chr2 4046635 4046732 -249209851 + CT-rich Low_complexity Low_complexity 2 100 0 929 187 12 0 chr2 4047021 4047187 -249209396 - FAM SINE Alu 0 49 1 2243 99 0 0 chr2 4047423 4047756 -249208827 + AluSx SINE Alu 1 333 0 342 259 12 0 chr2 4047756 4047841 -249208742 + L1M4 LINE L1 4740 4825 -1321 1125 155 6 6 chr2 4047841 4048015 -249208568 + AluSx SINE Alu 1 174 -138 482 260 95 18 chr2 4048159 4048328 -249208255 + L1ME3A LINE L1 5952 6133 -37 1162 165 55 5 chr2 4048336 4048554 -249208029 + MER46A DNA MER2_type 1 229 -7 273 274 66 38 chr2 4048561 4048667 -249207916 + L1ME3A LINE L1 5901 6009 -161 255 188 109 31 chr2 4048880 4048944 -249207639 + MER5C DNA MER1_type 56 124 -200 212 266 38 0 chr2 4049118 4049197 -249207386 + A-rich Low_complexity Low_complexity 1 82 0 866 241 44 4 chr2 4049534 4049762 -249206821 - AluJo SINE Alu 0 312 76 761 182 0 15 chr2 4049869 4050001 -249206582 + AluJb SINE Alu 180 309 -3 284 247 0 0 chr2 4050071 4050144 -249206439 + (CCCTAA)n Simple_repeat Simple_repeat 5 77 0 5491 88 39 46 chr2 4050145 4051189 -249205394 + SVA Other Other 8 868 -590 455 329 15 14 chr2 4051227 4051445 -249205138 + CT-rich Low_complexity Low_complexity 1 218 0 224 187 22 22 chr2 4051498 4051589 -249204994 + CT-rich Low_complexity Low_complexity 3 93 0 384 219 62 27 chr2 4051912 4052058 -249204525 + L1ME4a LINE L1 5967 6117 -4 2147 110 3 10 chr2 4053718 4054017 -249202566 - AluSq SINE Alu -16 297 1 189 0 0 0 chr2 4054022 4054043 -249202540 + (T)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr2 4054740 4054761 -249201822 + GC_rich Low_complexity Low_complexity 1 21 0 549 146 37 0 chr2 4054942 4055024 -249201559 - FLAM SINE Alu -16 127 43 1099 112 0 13 chr2 4056039 4056191 -249200392 + AluSq/x SINE Alu 1 150 -163 354 23 0 0 chr2 4056311 4056354 -249200229 + (G)n Simple_repeat Simple_repeat 1 43 0 367 196 0 56 chr2 4057583 4057690 -249198893 - LTR41 LTR ERVL -11 762 662 945 91 0 0 chr2 4058043 4058164 -249198419 + AluSc SINE Alu 175 295 -14 2313 100 0 3 chr2 4058230 4058541 -249198042 + AluY SINE Alu 1 310 -1 2060 131 0 0 chr2 4058543 4058825 -249197758 + AluSx SINE Alu 1 316 0 208 88 0 0 chr2 4058825 4058859 -249197724 + (TAAAA)n Simple_repeat Simple_repeat 2 155 0 332 192 71 30 chr2 4059633 4059732 -249196851 - FLAM_C SINE Alu -7 126 24 29 70 0 0 chr2 4060607 4060664 -249195919 + AT_rich Low_complexity Low_complexity 1 57 0 804 218 14 0 chr2 4060669 4060816 -249195767 - FAM SINE Alu -36 149 1 444 179 36 12 chr2 4061136 4061220 -249195363 - MLT1E1 LTR MaLR -50 604 519 1701 182 3 16 chr2 4061866 4062002 -249194581 + AluJb SINE Alu 1 137 -175 2292 101 3 0 chr2 4062002 4062299 -249194284 + AluSq SINE Alu 1 298 -15 1701 182 3 16 chr2 4062299 4062470 -249194113 + AluJb SINE Alu 137 304 -8 2080 115 20 0 chr2 4062658 4062954 -249193629 + AluSx SINE Alu 1 302 -10 207 188 0 0 chr2 4063216 4063264 -249193319 + (TTA)n Simple_repeat Simple_repeat 2 49 0 834 162 78 24 chr2 4063276 4063443 -249193140 - AluJb SINE Alu -44 268 93 466 130 0 26 chr2 4063453 4063530 -249193053 + MLT1A1 LTR MaLR 291 365 0 2282 110 0 3 chr2 4063980 4064281 -249192302 + AluSg SINE Alu 1 300 -10 1971 141 38 0 chr2 4064320 4064610 -249191973 + AluSx SINE Alu 1 301 -11 918 169 39 0 chr2 4064610 4064764 -249191819 + AluSg/x SINE Alu 132 291 -19 446 273 72 24 chr2 4064765 4064974 -249191609 + L1MDb LINE L1 936 1154 -5255 187 224 90 30 chr2 4065045 4065112 -249191471 - MIR SINE MIR -158 104 34 845 183 0 0 chr2 4065648 4065790 -249190793 - FLAM_C SINE Alu -1 142 1 22 70 0 0 chr2 4065934 4065977 -249190606 + AT_rich Low_complexity Low_complexity 1 43 0 2517 157 37 5 chr2 4066124 4066557 -249190026 - L1MB4 LINE L1 -7 6173 5727 1659 159 21 14 chr2 4066775 4067065 -249189518 + AluJb SINE Alu 1 292 -20 1814 148 45 0 chr2 4067454 4067745 -249188838 - AluJb SINE Alu -8 304 1 305 260 95 41 chr2 4067747 4067916 -249188667 - L1M4 LINE L1 -3114 3032 2855 1367 81 0 6 chr2 4068095 4068269 -249188314 + AluSp SINE Alu 131 303 -10 263 77 51 0 chr2 4068931 4068970 -249187613 + HAL1 LINE L1 527 567 -1940 1030 429 98 0 chr2 4069164 4069439 -249187144 - AluSx SINE Alu 0 302 1 733 183 0 46 chr2 4069439 4069570 -249187013 + FAM SINE Alu 25 149 -36 267 267 160 61 chr2 4069672 4069803 -249186780 - L2 LINE L2 -1 3312 3169 1914 195 41 31 chr2 4069814 4070204 -249186379 + MSTD LTR MaLR 1 394 -2 1992 113 13 17 chr2 4070204 4070328 -249186255 + AluSg SINE Alu 12 135 -175 2229 84 3 20 chr2 4070328 4070625 -249185958 + AluY SINE Alu 1 292 -19 1992 113 13 17 chr2 4070625 4070800 -249185783 + AluSg SINE Alu 135 310 0 1014 230 5 0 chr2 4070820 4071007 -249185576 - MER5A DNA MER1_type 0 189 2 460 251 141 25 chr2 4071012 4071211 -249185372 - L2 LINE L2 -140 3173 2952 2930 43 32 3 chr2 4071318 4071705 -249184878 + SVA Other Other 1011 1407 0 197 244 24 0 chr2 4071705 4071746 -249184837 + L2 LINE L2 2773 2814 -500 1214 130 5 65 chr2 4071749 4071964 -249184619 - AluJo SINE Alu -4 308 107 650 88 0 0 chr2 4071974 4072054 -249184529 + AluSp/q SINE Alu 215 294 -19 * 706 172 9 9 chr2 4072053 4072169 -249184414 - AluJo SINE Alu -195 117 2 2372 95 3 0 chr2 4072222 4072518 -249184065 + AluSq SINE Alu 1 297 -16 1610 296 23 58 chr2 4072518 4073016 -249183567 - HERVL LTR ERVL -1231 4533 4045 1658 138 0 71 chr2 4073016 4073198 -249183385 - AluJo SINE Alu -16 296 139 2322 119 0 0 chr2 4073198 4073501 -249183082 + AluSg SINE Alu 1 303 -7 1658 138 0 71 chr2 4073501 4073601 -249182982 - AluJo SINE Alu -173 139 34 1610 296 23 58 chr2 4073601 4073953 -249182630 - HERVL LTR ERVL -1719 4045 3682 2201 94 0 0 chr2 4074193 4074468 -249182115 + AluSx SINE Alu 1 275 -37 203 0 0 36 chr2 4074472 4074500 -249182083 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 310 332 70 27 chr2 4074522 4074709 -249181874 + MIR SINE MIR 20 214 -48 1957 130 3 7 chr2 4075076 4075402 -249181181 - AluSx SINE Alu 0 325 1 32 43 0 0 chr2 4076331 4076377 -249180206 + AT_rich Low_complexity Low_complexity 1 46 0 1361 144 87 9 chr2 4077106 4077335 -249179248 - MSTA LTR MaLR 0 428 182 1340 69 0 0 chr2 4077346 4077506 -249179077 - L1PA7 LINE L1 -5 6149 5990 2425 69 3 13 chr2 4077514 4077820 -249178763 - AluSc SINE Alu -6 303 1 239 115 39 77 chr2 4077837 4077889 -249178694 - Alu SINE Alu -167 135 86 574 181 11 0 chr2 4078013 4078107 -249178476 - FAM SINE Alu -89 96 2 379 250 36 0 chr2 4079178 4079290 -249177293 - LTR16A1 LTR ERVL -15 442 327 2174 114 0 7 chr2 4079290 4079587 -249176996 + AluSx SINE Alu 1 295 -17 2456 212 105 23 chr2 4079651 4079856 -249176727 + L1MC4 LINE L1 7001 7188 -854 1852 230 146 13 chr2 4079856 4080378 -249176205 + MLT1E LTR MaLR 1 591 -2 2456 212 105 23 chr2 4080378 4080950 -249175633 + L1MC4 LINE L1 7188 7842 -200 333 118 0 0 chr2 4081167 4081185 -249175398 + (CA)n Simple_repeat Simple_repeat 1 69 0 333 118 0 0 chr2 4081185 4081236 -249175347 + (CA)n Simple_repeat Simple_repeat 2 52 0 204 67 0 0 chr2 4081253 4081283 -249175300 + (TCTA)n Simple_repeat Simple_repeat 4 33 0 608 101 0 0 chr2 4081327 4081406 -249175177 + AluS SINE Alu 2 80 -232 1069 150 0 0 chr2 4081856 4082016 -249174567 - AluSq SINE Alu -20 293 134 2469 71 0 0 chr2 4082016 4082313 -249174270 - AluY SINE Alu -14 297 1 2381 81 13 0 chr2 4082313 4082620 -249173963 - AluSx SINE Alu -1 311 1 28 0 0 0 chr2 4082621 4082649 -249173934 + AT_rich Low_complexity Low_complexity 1 28 0 465 291 92 0 chr2 4083287 4083428 -249173155 - MIR3 SINE MIR -10 198 45 286 232 63 42 chr2 4085759 4085854 -249170729 - HERVL LTR ERVL -1355 4299 4203 781 240 36 25 chr2 4085857 4086053 -249170530 + MIR SINE MIR 63 260 -2 1050 111 0 76 chr2 4086520 4086692 -249169891 + FRAM SINE Alu 1 159 -17 249 281 210 27 chr2 4086754 4086978 -249169605 - L2 LINE L2 -1104 2210 1946 387 339 125 19 chr2 4087323 4087739 -249168844 + L2 LINE L2 1745 2204 -1110 1365 143 0 31 chr2 4088414 4088637 -249167946 - AluSg/x SINE Alu -14 296 81 1550 176 116 147 chr2 4089064 4089152 -249167431 + L1MC5 LINE L1 6962 7051 -910 2109 113 26 22 chr2 4089152 4089463 -249167120 - AluSq SINE Alu -1 312 1 1550 176 116 147 chr2 4089463 4090287 -249166296 + L1MC5 LINE L1 7051 7846 -115 1257 287 16 3 chr2 4090460 4090774 -249165809 + LTR16A LTR ERVL 123 440 -10 354 204 108 32 chr2 4090777 4090870 -249165713 + HERV16 LTR ERVL 1985 2084 -2912 422 311 104 5 chr2 4090892 4091085 -249165498 + HERV16 LTR ERVL 2245 2456 -2540 844 276 97 47 chr2 4091098 4091479 -249165104 + HERV16 LTR ERVL 3314 3713 -2051 1174 76 139 0 chr2 4091481 4091653 -249164930 + MSTA LTR MaLR 1 196 -232 2193 120 0 0 chr2 4091655 4091954 -249164629 + AluSx SINE Alu 1 299 -13 247 218 0 0 chr2 4091955 4092010 -249164573 + L1MD2 LINE L1 1562 1616 -4924 1827 163 28 3 chr2 4092013 4092301 -249164282 + AluJb SINE Alu 1 295 -17 2739 196 175 19 chr2 4092355 4093252 -249163331 + L1MD2 LINE L1 1606 2642 -3898 2720 215 104 20 chr2 4093252 4093951 -249162632 + L1MD2 LINE L1 5969 6726 -27 300 236 0 113 chr2 4093980 4094047 -249162536 + MLT1K LTR MaLR 3 55 -533 2196 129 0 3 chr2 4094047 4094342 -249162241 + AluSx SINE Alu 1 294 -18 300 236 0 113 chr2 4094342 4094380 -249162203 + MLT1K LTR MaLR 55 96 -492 240 237 13 26 chr2 4094622 4094698 -249161885 + LTR67 LTR ERVL 472 546 -11 2162 131 0 0 chr2 4094705 4095017 -249161566 + AluSx SINE Alu 1 312 0 27 0 0 0 chr2 4095066 4095093 -249161490 + AT_rich Low_complexity Low_complexity 1 27 0 806 118 0 0 chr2 4095463 4095573 -249161010 - AluSg/x SINE Alu -18 292 183 11555 25 0 6 chr2 4095684 4097905 -249158678 + L1HS LINE L1 3951 6155 0 369 263 0 26 chr2 4097903 4098055 -249158528 + L1MC3 LINE L1 3646 3793 -2747 * 878 229 63 76 chr2 4098037 4098434 -249158149 + L1MC3 LINE L1 5271 5662 -878 3751 199 12 4 chr2 4098434 4099157 -249157426 + Tigger2 DNA MER2_type 1 729 -1989 1152 170 122 0 chr2 4099197 4099427 -249157156 + Tigger2 DNA MER2_type 2461 2718 0 10028 203 51 23 chr2 4099431 4100735 -249155848 + L1MC3 LINE L1 5665 7069 -1110 402 21 0 0 chr2 4100735 4100782 -249155801 + (TG)n Simple_repeat Simple_repeat 2 48 0 10028 203 51 23 chr2 4100782 4101909 -249154674 + L1MC3 LINE L1 7069 8163 -16 219 209 149 15 chr2 4101991 4102058 -249154525 + MIR SINE MIR 113 188 -74 225 253 63 13 chr2 4102086 4102165 -249154418 - MARNA DNA Mariner -108 478 396 * 266 215 152 0 chr2 4102108 4102187 -249154396 + MARNA DNA Mariner 133 223 -363 22 70 0 0 chr2 4102239 4102282 -249154301 + AT_rich Low_complexity Low_complexity 1 43 0 340 325 81 34 chr2 4102379 4102613 -249153970 + MIR SINE MIR 18 262 0 28 48 0 0 chr2 4102646 4102688 -249153895 + AT_rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr2 4102808 4102832 -249153751 + AT_rich Low_complexity Low_complexity 1 24 0 219 88 0 0 chr2 4103688 4103722 -249152861 + (GA)n Simple_repeat Simple_repeat 1 34 0 30 0 0 0 chr2 4104306 4104336 -249152247 + AT_rich Low_complexity Low_complexity 1 30 0 2124 140 0 3 chr2 4105596 4105904 -249150679 + AluSq SINE Alu 1 307 -6 2053 113 23 3 chr2 4105917 4106219 -249150364 + AluSg SINE Alu 1 308 -2 189 171 0 0 chr2 4106223 4106258 -249150325 + A-rich Low_complexity Low_complexity 1 35 0 612 134 0 0 chr2 4106280 4106362 -249150221 + FRAM SINE Alu 75 156 -20 3006 203 35 7 chr2 4106557 4107149 -249149434 - MSTB-int LTR MaLR -1042 609 1 2301 181 43 17 chr2 4107149 4107564 -249149019 - MSTB LTR MaLR 0 426 1 335 71 0 0 chr2 4107564 4107606 -249148977 + MSTC LTR MaLR 381 422 -6 1573 167 30 79 chr2 4107629 4107768 -249148815 + MLT2A2 LTR ERVL 52 196 -358 2477 70 0 6 chr2 4107768 4108081 -249148502 + AluY SINE Alu 1 311 0 1573 167 30 79 chr2 4108081 4108453 -249148130 + MLT2A2 LTR ERVL 196 554 0 333 0 0 0 chr2 4110933 4110970 -249145613 + (TC)n Simple_repeat Simple_repeat 2 38 0 647 258 75 0 chr2 4111189 4111375 -249145208 + MER63A DNA MER1_type 3 202 -8 30 0 0 0 chr2 4112095 4112125 -249144458 + AT_rich Low_complexity Low_complexity 1 30 0 258 224 0 0 chr2 4112435 4112520 -249144063 + CT-rich Low_complexity Low_complexity 1 85 0 283 289 52 82 chr2 4113339 4113474 -249143109 - MIR SINE MIR -13 249 119 21 57 0 0 chr2 4113603 4113638 -249142945 + AT_rich Low_complexity Low_complexity 1 35 0 2276 123 0 0 chr2 4114043 4114351 -249142232 + AluSg SINE Alu 1 308 -2 226 220 147 37 chr2 4114441 4114550 -249142033 + MIR SINE MIR 107 227 -35 2064 127 0 3 chr2 4115298 4115598 -249140985 - AluSq SINE Alu 0 313 15 207 0 0 0 chr2 4115601 4115624 -249140959 + (T)n Simple_repeat Simple_repeat 1 23 0 182 37 37 0 chr2 4117958 4117985 -249138598 + (TTTTTG)n Simple_repeat Simple_repeat 1 28 0 505 275 50 84 chr2 4118233 4118851 -249137732 - HAL1 LINE L1 -886 1621 1025 21 36 0 0 chr2 4118897 4118925 -249137658 + AT_rich Low_complexity Low_complexity 1 28 0 236 53 26 0 chr2 4119535 4119573 -249137010 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 2049 70 0 77 chr2 4119576 4119876 -249136707 - AluY SINE Alu -34 277 1 2049 136 13 0 chr2 4120171 4120473 -249136110 + AluSx SINE Alu 3 308 -4 180 125 0 0 chr2 4121093 4121125 -249135458 + (CA)n Simple_repeat Simple_repeat 2 33 0 219 280 25 68 chr2 4121157 4121275 -249135308 - L2 LINE L2 -4 3309 3197 430 322 37 28 chr2 4122874 4123088 -249133495 - MIR SINE MIR -24 238 23 341 146 0 0 chr2 4124291 4124346 -249132237 + L1P5 LINE L1 5391 5445 -709 3451 55 2 0 chr2 4124355 4124789 -249131794 + L1PA5 LINE L1 5718 6152 -2 3334 188 120 5 chr2 4124800 4125568 -249131015 + L1MA8 LINE L1 5428 6283 -8 370 305 18 24 chr2 4126326 4126490 -249130093 - L1MD3 LINE L1 -5 7990 7828 330 67 317 0 chr2 4127129 4127189 -249129394 + MADE1 DNA Mariner 1 79 -1 181 278 0 0 chr2 4127764 4127800 -249128783 - L2 LINE L2 -16 3256 3221 432 248 58 7 chr2 4127882 4128019 -249128564 + L1M4 LINE L1 2436 2579 -3567 306 273 88 68 chr2 4128548 4128947 -249127636 + HAL1b LINE L1 68 474 -874 * 1846 284 89 30 chr2 4128944 4130468 -249126115 - L1MDa LINE L1 -1587 4819 3175 * 6099 218 37 14 chr2 4130464 4132520 -249124063 + L1MA4 LINE L1 4 2131 -4197 3445 83 0 0 chr2 4132520 4132964 -249123619 + MLT2A1 LTR ERVL 1 444 0 6099 218 37 14 chr2 4132964 4133606 -249122977 + L1MA4 LINE L1 2131 2756 -3572 5550 183 28 50 chr2 4133599 4134465 -249122118 + L1MA4 LINE L1 4061 4945 -1537 * 1949 117 25 3 chr2 4134465 4134825 -249121758 + AluSc SINE Alu 1 309 0 5550 183 28 50 chr2 4134825 4136380 -249120203 + L1MA4 LINE L1 4945 6425 -57 2281 87 0 3 chr2 4136380 4136667 -249119916 + AluY SINE Alu 3 288 -23 5550 183 28 50 chr2 4136667 4136718 -249119865 + L1MA4 LINE L1 6425 6476 -6 1231 266 85 23 chr2 4136753 4137415 -249119168 - L1MDa LINE L1 -3231 3175 2473 545 254 76 61 chr2 4137439 4138017 -249118566 - L1MDa LINE L1 -3984 2422 1836 307 214 0 95 chr2 4138023 4138149 -249118434 - L1MDa LINE L1 -4935 1471 1358 2084 74 0 0 chr2 4138149 4138419 -249118164 - L1PA6 LINE L1 0 6154 5885 502 308 44 54 chr2 4138456 4138953 -249117630 - L1MDa LINE L1 -5142 1267 776 2233 91 7 10 chr2 4140571 4140880 -249115703 - AluY SINE Alu -3 308 1 1390 210 35 11 chr2 4140885 4141171 -249115412 - AluJo SINE Alu -19 293 1 3923 262 64 48 chr2 4142955 4143845 -249112738 + L1MEc LINE L1 2078 2952 -3263 261 0 0 0 chr2 4143845 4143874 -249112709 + (CAA)n Simple_repeat Simple_repeat 2 30 0 3923 262 64 48 chr2 4143874 4145207 -249111376 + L1MEc LINE L1 2952 4287 -1928 2335 278 55 43 chr2 4145569 4145683 -249110900 + L1MCb LINE L1 3 114 -5931 1528 166 50 68 chr2 4145683 4146063 -249110520 - THE1C LTR MaLR 0 375 3 2335 278 55 43 chr2 4146063 4146984 -249109599 + L1MCb LINE L1 114 1050 -4995 581 281 64 54 chr2 4147010 4147479 -249109104 + MER77 LTR ERV1 53 603 -2 271 190 25 25 chr2 4147646 4147725 -249108858 + L1MCb LINE L1 1057 1135 -5429 627 41 0 31 chr2 4147788 4147886 -249108697 + (TCTA)n Simple_repeat Simple_repeat 3 97 0 2371 249 34 35 chr2 4147911 4149000 -249107583 + L1MCb LINE L1 2384 3471 -3093 2487 42 3 10 chr2 4149000 4149307 -249107276 - AluY SINE Alu -6 305 1 2371 249 34 35 chr2 4149307 4149529 -249107054 + L1MCb LINE L1 3471 3692 -2872 31556 36 34 2 chr2 4149542 4153459 -249103124 + L1P LINE L1 1 4044 -2102 1986 116 20 10 chr2 4153559 4153852 -249102731 - AluSq SINE Alu -17 296 1 269 282 14 0 chr2 4153995 4154066 -249102517 + MIR SINE MIR 126 197 -65 329 202 23 132 chr2 4155030 4155159 -249101424 - MER5B DNA MER1_type -58 120 6 23 0 0 0 chr2 4157627 4157650 -249098933 + AT_rich Low_complexity Low_complexity 1 23 0 32 0 0 0 chr2 4157948 4157980 -249098603 + AT_rich Low_complexity Low_complexity 1 32 0 276 30 0 0 chr2 4158092 4158125 -249098458 + (TG)n Simple_repeat Simple_repeat 2 34 0 1238 218 72 50 chr2 4158164 4158526 -249098057 - MLT1A2 LTR MaLR -1 373 4 1944 219 72 9 chr2 4158989 4159433 -249097150 - MER70A LTR ERVL 0 472 1 406 328 139 15 chr2 4159433 4159765 -249096818 - MLT1I LTR MaLR -36 373 1 453 323 111 49 chr2 4161048 4161435 -249095148 + L2 LINE L2 2504 2914 -400 367 315 49 27 chr2 4161515 4161699 -249094884 + L2 LINE L2 3122 3309 -4 23 0 0 0 chr2 4162188 4162211 -249094372 + AT_rich Low_complexity Low_complexity 1 23 0 289 322 21 10 chr2 4163578 4163680 -249092903 - MIR SINE MIR -66 142 40 189 242 145 0 chr2 4163807 4163869 -249092714 - MIR SINE MIR -105 103 33 2171 131 34 25 chr2 4164081 4164439 -249092144 - THE1B LTR MaLR -3 361 1 32 86 0 0 chr2 4164616 4164697 -249091886 + AT_rich Low_complexity Low_complexity 1 81 0 273 279 90 33 chr2 4165680 4165802 -249090781 - L2 LINE L2 -467 2847 2719 550 257 28 19 chr2 4165858 4166072 -249090511 - L1ME3 LINE L1 -2 6160 5945 339 247 12 0 chr2 4166087 4166168 -249090415 - L1ME3 LINE L1 -285 5885 5804 270 381 124 22 chr2 4166205 4166575 -249090008 - L2 LINE L2 -609 2705 2298 2893 59 0 5 chr2 4167106 4167495 -249089088 + L1PA7 LINE L1 5743 6129 -25 495 262 84 42 chr2 4168048 4168239 -249088344 - MLT1J2 LTR MaLR -251 199 1 315 0 0 0 chr2 4168598 4168633 -249087950 + (TG)n Simple_repeat Simple_repeat 2 36 0 199 133 44 0 chr2 4168687 4168732 -249087851 + CT-rich Low_complexity Low_complexity 2 48 0 2367 83 6 0 chr2 4170322 4170647 -249085936 + L1PA8 LINE L1 5843 6169 -3 2390 80 0 3 chr2 4171121 4171421 -249085162 + AluSc SINE Alu 1 299 -10 185 358 37 0 chr2 4173195 4173276 -249083307 + MIR SINE MIR 60 143 -119 474 163 0 0 chr2 4174370 4174462 -249082121 - MER53 DNA DNA -2 187 96 1809 239 38 50 chr2 4174574 4175481 -249081102 - L1M4 LINE L1 -2497 3649 2754 262 224 31 31 chr2 4175744 4175905 -249080678 + (TA)n Simple_repeat Simple_repeat 2 162 0 420 136 0 0 chr2 4176571 4176630 -249079953 - AluS SINE Alu -237 72 14 1822 175 14 0 chr2 4177405 4177702 -249078881 - AluJo SINE Alu -10 302 2 2636 20 0 3 chr2 4178337 4178636 -249077947 - AluY SINE Alu -13 298 1 285 51 0 0 chr2 4178905 4178944 -249077639 + (TAAA)n Simple_repeat Simple_repeat 2 40 0 309 309 94 69 chr2 4179000 4179404 -249077179 + HAL1 LINE L1 770 1183 -1324 998 223 36 43 chr2 4179404 4179709 -249076874 + MLT1C LTR MaLR 1 303 -164 244 215 114 0 chr2 4179831 4179910 -249076673 + HAL1 LINE L1 1198 1285 -1222 403 253 114 6 chr2 4181045 4181203 -249075380 + MLT1J2 LTR MaLR 8 182 -268 345 238 30 40 chr2 4181202 4181303 -249075280 + MLT1J1 LTR MaLR 202 301 -145 * 329 236 46 78 chr2 4183360 4183563 -249073020 + MIR SINE MIR 44 247 -15 653 250 56 12 chr2 4184054 4184376 -249072207 - MSTD LTR MaLR -14 382 1 21 0 0 0 chr2 4184548 4184569 -249072014 + AT_rich Low_complexity Low_complexity 1 21 0 2172 85 0 11 chr2 4185097 4185379 -249071204 + AluSg SINE Alu 1 279 -31 565 100 0 0 chr2 4185843 4185923 -249070660 + MADE1 DNA Mariner 1 80 0 403 296 72 34 chr2 4186229 4186493 -249070090 + L2 LINE L2 737 1010 -2304 685 250 6 33 chr2 4186516 4186696 -249069887 - FAM SINE Alu 0 175 1 1048 329 68 68 chr2 4186704 4187717 -249068866 + L2 LINE L2 1747 2759 -555 240 377 32 13 chr2 4188317 4188471 -249068112 + L2 LINE L2 2797 2953 -361 21 0 0 0 chr2 4188471 4188492 -249068091 + AT_rich Low_complexity Low_complexity 1 21 0 325 153 14 56 chr2 4188629 4188701 -249067882 - MLT1G LTR MaLR -306 284 216 791 308 42 39 chr2 4189089 4189449 -249067134 - L2 LINE L2 -536 2778 2418 365 326 8 8 chr2 4189628 4189757 -249066826 + MER58A DNA MER1_type 4 132 0 238 267 33 0 chr2 4189766 4189826 -249066757 + MER58A DNA MER1_type 163 224 0 233 229 37 83 chr2 4191124 4191233 -249065350 + MLT1D LTR MaLR 6 109 -517 596 269 88 4 chr2 4191269 4191507 -249065076 + MLT1D LTR MaLR 180 437 -68 4385 237 36 23 chr2 4192505 4192594 -249063989 - Charlie1a DNA MER1_type -1319 1442 1356 2042 156 27 16 chr2 4192594 4192965 -249063618 - THE1C LTR MaLR 0 375 1 9264 134 30 41 chr2 4192965 4194560 -249062023 - THE1C-int LTR MaLR 0 1580 3 1382 201 88 28 chr2 4194562 4194916 -249061667 - THE1C LTR MaLR 0 375 1 4385 237 36 23 chr2 4194916 4196233 -249060350 - Charlie1a DNA MER1_type -1405 1356 13 264 204 32 65 chr2 4198212 4198305 -249058278 - MLT1J LTR MaLR -379 132 43 305 330 82 21 chr2 4198736 4198969 -249057614 + L1MEd LINE L1 563 809 -5310 191 259 0 12 chr2 4199092 4199173 -249057410 + (TA)n Simple_repeat Simple_repeat 1 80 0 342 246 54 42 chr2 4199233 4199400 -249057183 + L1MEd LINE L1 1014 1182 -4937 8386 29 0 0 chr2 4199597 4200630 -249055953 - L1PA3 LINE L1 -1236 4910 3878 7707 19 2 0 chr2 4200630 4201908 -249054675 + L1PA3 LINE L1 4918 6197 0 2323 78 0 0 chr2 4202013 4202295 -249054288 + AluSx SINE Alu 1 282 -30 2010 279 68 44 chr2 4202938 4203619 -249052964 + L1ME1 LINE L1 43 767 -5629 2497 71 0 3 chr2 4203619 4203930 -249052653 + AluY SINE Alu 1 310 -1 2010 279 68 44 chr2 4203930 4204455 -249052128 + L1ME1 LINE L1 767 1278 -5118 1781 181 0 7 chr2 4204462 4204765 -249051818 - AluSx SINE Alu -11 301 1 288 0 0 0 chr2 4204886 4204918 -249051665 + (A)n Simple_repeat Simple_repeat 1 32 0 1343 275 100 22 chr2 4204918 4206595 -249049988 + L1ME1 LINE L1 1624 3426 -2789 900 237 111 45 chr2 4206583 4206630 -249049953 + L1ME1 LINE L1 4525 4567 -1648 * 222 118 0 0 chr2 4206630 4206664 -249049919 + (CA)n Simple_repeat Simple_repeat 1 34 0 900 237 111 45 chr2 4206664 4207131 -249049452 + L1ME1 LINE L1 4567 5073 -1142 905 158 0 0 chr2 4207135 4207268 -249049315 + AluSq/x SINE Alu 1 133 -180 1592 266 46 59 chr2 4207372 4208519 -249048064 + L1ME1 LINE L1 5109 6230 -5 1866 168 0 7 chr2 4208658 4208956 -249047627 + AluJb SINE Alu 1 296 -16 216 0 0 0 chr2 4208960 4208984 -249047599 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 490 277 94 24 chr2 4209340 4209631 -249046952 + L1ME3A LINE L1 5616 5922 -256 2167 135 0 0 chr2 4209713 4210010 -249046573 + AluSx SINE Alu 1 297 -15 2669 39 0 0 chr2 4210232 4210537 -249046046 + AluY SINE Alu 1 305 -6 1516 218 120 30 chr2 4210826 4211318 -249045265 - MER68 LTR ERV1 -4 558 23 259 282 57 16 chr2 4212145 4212269 -249044314 - L1ME4a LINE L1 -47 6074 5946 234 174 0 0 chr2 4212291 4212337 -249044246 + (TA)n Simple_repeat Simple_repeat 1 46 0 195 162 0 0 chr2 4213448 4213485 -249043098 + (TATG)n Simple_repeat Simple_repeat 4 40 0 184 250 115 0 chr2 4213905 4213957 -249042626 + L2 LINE L2 3117 3174 -98 188 336 75 15 chr2 4214461 4214595 -249041988 - MIR3 SINE MIR -35 173 32 2223 106 3 0 chr2 4214848 4215141 -249041442 + AluSq SINE Alu 1 294 -19 416 394 33 21 chr2 4215527 4215862 -249040721 + L3 LINE CR1 1084 1422 -155 23 33 0 0 chr2 4216442 4216472 -249040111 + AT_rich Low_complexity Low_complexity 1 30 0 25 51 0 0 chr2 4217123 4217162 -249039421 + AT_rich Low_complexity Low_complexity 1 39 0 24 53 0 0 chr2 4217773 4217811 -249038772 + AT_rich Low_complexity Low_complexity 1 38 0 24 0 0 0 chr2 4218087 4218111 -249038472 + AT_rich Low_complexity Low_complexity 1 24 0 2327 118 8 30 chr2 4218777 4219149 -249037434 - THE1B LTR MaLR 0 364 1 11439 100 8 11 chr2 4219149 4220734 -249035849 - THE1B-int LTR MaLR 0 1580 1 2277 120 19 25 chr2 4220734 4221100 -249035483 - THE1B LTR MaLR 0 364 1 1436 221 24 3 chr2 4221691 4222021 -249034562 + MER2 DNA MER2_type 1 337 -8 557 301 92 15 chr2 4222132 4222338 -249034245 - MIR SINE MIR -27 235 14 307 375 97 21 chr2 4223125 4223413 -249033170 - L2 LINE L2 -1 3271 2962 2324 120 19 6 chr2 4223746 4224105 -249032478 - THE1B LTR MaLR 0 364 1 1497 190 47 0 chr2 4224789 4225063 -249031520 - AluJb SINE Alu -24 288 2 21 0 0 0 chr2 4225128 4225149 -249031434 + AT_rich Low_complexity Low_complexity 1 21 0 1718 172 6 21 chr2 4225481 4225813 -249030770 + MLT1A1 LTR MaLR 33 359 -6 243 61 0 0 chr2 4226920 4226953 -249029630 + (TG)n Simple_repeat Simple_repeat 2 34 0 353 250 11 11 chr2 4228065 4228157 -249028426 + L2 LINE L2 3221 3312 -1 12762 160 19 10 chr2 4229144 4231506 -249025077 + Tigger1 DNA MER2_type 26 2410 -8 254 26 53 0 chr2 4232840 4232878 -249023705 + (CAAA)n Simple_repeat Simple_repeat 1 40 0 195 290 129 16 chr2 4234623 4234747 -249021836 + MIR SINE MIR 107 244 -18 383 169 0 0 chr2 4235751 4235828 -249020755 - L1PA15 LINE L1 -2 6163 6087 2906 155 21 6 chr2 4235830 4236352 -249020231 - L1PA15 LINE L1 -187 5978 5449 869 185 25 35 chr2 4237263 4237463 -249019120 + MER20 DNA MER1_type 1 198 -21 24 0 0 0 chr2 4237916 4237940 -249018643 + AT_rich Low_complexity Low_complexity 1 24 0 492 357 61 5 chr2 4238772 4238985 -249017598 + L2 LINE L2 2891 3115 -198 204 40 0 0 chr2 4238994 4239019 -249017564 + (TTTAA)n Simple_repeat Simple_repeat 3 27 0 1289 152 17 35 chr2 4239019 4239241 -249017342 - AluJo SINE Alu -29 283 64 395 266 105 0 chr2 4239499 4239642 -249016941 - MIR SINE MIR -13 249 92 306 0 0 0 chr2 4239957 4239991 -249016592 + (TG)n Simple_repeat Simple_repeat 1 34 0 216 333 19 0 chr2 4240030 4240084 -249016499 + MER5A DNA MER1_type 72 126 -63 2371 235 34 14 chr2 4241661 4242316 -249014267 + Charlie1a DNA MER1_type 1 668 -787 827 181 84 34 chr2 4242335 4242572 -249014011 + Charlie1a DNA MER1_type 856 1104 -351 1523 179 94 21 chr2 4243136 4243252 -249013331 + L1MA9 LINE L1 5717 5823 -489 1708 213 29 79 chr2 4243252 4243835 -249012748 - MLT2B3 LTR ERVL 0 554 1 1523 179 94 21 chr2 4243835 4244182 -249012401 + L1MA9 LINE L1 5823 6312 0 845 174 0 0 chr2 4244275 4244407 -249012176 - FRAM SINE Alu -24 152 21 1644 172 97 3 chr2 4247507 4247815 -249008768 - MER1B DNA MER1_type 0 337 1 198 294 0 0 chr2 4248448 4248499 -249008084 - L2 LINE L2 0 3313 3263 1991 153 3 10 chr2 4248595 4248909 -249007674 + AluSx SINE Alu 1 312 0 555 327 104 78 chr2 4248937 4250355 -249006228 - L2 LINE L2 -220 3093 1636 814 302 66 13 chr2 4250893 4251198 -249005385 + LTR16A LTR ERVL 120 440 -10 1073 256 55 23 chr2 4251199 4251598 -249004985 + MLT1C LTR MaLR 1 412 -55 321 384 12 16 chr2 4251787 4252042 -249004541 + ERVL LTR ERVL 4744 4997 -767 1817 186 0 0 chr2 4252399 4252695 -249003888 + AluSx SINE Alu 1 296 -16 1983 141 14 39 chr2 4253385 4253747 -249002836 - L1PA16 LINE L1 -9 6157 5805 277 169 3 0 chr2 4253752 4253816 -249002767 + L1PA16 LINE L1 5752 5801 -364 27 0 0 0 chr2 4254246 4254273 -249002310 + AT_rich Low_complexity Low_complexity 1 27 0 25 0 0 0 chr2 4254550 4254575 -249002008 + AT_rich Low_complexity Low_complexity 1 25 0 832 237 83 28 chr2 4254862 4255225 -249001358 - LTR52 LTR ERVL -37 384 2 1755 158 177 11 chr2 4255598 4255965 -249000618 - MSTA LTR MaLR 0 428 1 284 331 19 0 chr2 4256093 4256247 -249000336 + L1MEc LINE L1 101 257 -6139 1790 266 63 49 chr2 4257089 4258154 -248998429 + L1M4 LINE L1 4174 5253 -893 21 0 0 0 chr2 4259440 4259461 -248997122 + AT_rich Low_complexity Low_complexity 1 21 0 232 297 11 22 chr2 4259755 4259846 -248996737 + L1MEc LINE L1 112 201 -6195 297 323 39 32 chr2 4259905 4260184 -248996399 + L1ME2 LINE L1 5874 6154 -10 22 0 0 0 chr2 4260398 4260420 -248996163 + AT_rich Low_complexity Low_complexity 1 22 0 318 275 23 69 chr2 4260986 4261045 -248995538 - L1MB7 LINE L1 0 6184 6124 2893 151 40 31 chr2 4261045 4261567 -248995016 + MER1A DNA MER1_type 1 527 0 318 275 23 69 chr2 4261567 4261638 -248994945 - L1MB7 LINE L1 -60 6124 6060 1447 216 47 38 chr2 4261674 4262036 -248994547 - L1MB8 LINE L1 -99 6079 5711 1300 199 3 101 chr2 4262036 4262372 -248994211 + AluJo SINE Alu 1 303 -9 1447 216 47 38 chr2 4262372 4262454 -248994129 - L1MB8 LINE L1 -467 5711 5631 1714 254 65 15 chr2 4262454 4263114 -248993469 - L1M4 LINE L1 -3224 2922 2230 232 271 62 70 chr2 4263476 4263605 -248992978 + L2 LINE L2 3164 3291 -22 411 318 83 28 chr2 4263628 4264027 -248992556 + L1 LINE L1 4207 4627 -1519 21 57 0 0 chr2 4264055 4264090 -248992493 + AT_rich Low_complexity Low_complexity 1 35 0 440 235 20 0 chr2 4264288 4264386 -248992197 + MER46A DNA MER2_type 47 146 -90 * 990 199 57 64 chr2 4264384 4264680 -248991903 + MER2 DNA MER2_type 51 344 -1 209 184 0 0 chr2 4265587 4265625 -248990958 - MIR SINE MIR -168 94 57 201 270 63 3 chr2 4265628 4265710 -248990873 - MIR SINE MIR -64 144 81 536 276 0 17 chr2 4266038 4266219 -248990364 + (CA)n Simple_repeat Simple_repeat 1 178 0 273 364 33 54 chr2 4266515 4266699 -248989884 + L2 LINE L2 3075 3254 -18 303 335 80 17 chr2 4266741 4266917 -248989666 + MIR SINE MIR 49 235 -27 233 321 18 113 chr2 4269143 4269311 -248987272 + MIR SINE MIR 23 174 -88 22 0 0 0 chr2 4271986 4272008 -248984575 + AT_rich Low_complexity Low_complexity 1 22 0 450 109 75 9 chr2 4272353 4272700 -248983883 + (TA)n Simple_repeat Simple_repeat 1 370 0 27 73 0 0 chr2 4272779 4272834 -248983749 + AT_rich Low_complexity Low_complexity 1 55 0 192 77 0 0 chr2 4272837 4272863 -248983720 + (CATA)n Simple_repeat Simple_repeat 2 27 0 268 304 96 64 chr2 4274041 4274166 -248982417 + MIR3 SINE MIR 6 134 -74 278 294 22 44 chr2 4274168 4274304 -248982279 + MER94 DNA DNA 1 133 -1 242 194 16 0 chr2 4274740 4274802 -248981781 + GA-rich Low_complexity Low_complexity 4 66 0 279 324 72 9 chr2 4275007 4275118 -248981465 + L2 LINE L2 3195 3312 -1 1572 133 8 0 chr2 4275566 4275814 -248980769 + L1PA13 LINE L1 5905 6154 -9 420 301 20 14 chr2 4275877 4276023 -248980560 - MIR SINE MIR 0 262 116 200 114 68 0 chr2 4277976 4278020 -248978563 + T-rich Low_complexity Low_complexity 1 47 0 236 97 65 0 chr2 4278695 4278757 -248977826 + (TA)n Simple_repeat Simple_repeat 1 66 0 207 381 114 11 chr2 4281940 4282116 -248974467 - L2 LINE L2 -433 2881 2688 25 0 0 0 chr2 4282499 4282524 -248974059 + AT_rich Low_complexity Low_complexity 1 25 0 396 40 0 0 chr2 4282883 4282933 -248973650 + (CA)n Simple_repeat Simple_repeat 1 50 0 218 384 0 0 chr2 4283962 4284061 -248972522 + (CA)n Simple_repeat Simple_repeat 2 100 0 308 304 0 22 chr2 4284078 4284170 -248972413 + L1MC4 LINE L1 6614 6703 -1339 21 36 0 0 chr2 4284537 4284565 -248972018 + AT_rich Low_complexity Low_complexity 1 28 0 223 163 41 0 chr2 4285985 4286034 -248970549 + A-rich Low_complexity Low_complexity 3 53 0 483 302 148 0 chr2 4286048 4286250 -248970333 - MIR SINE MIR -27 235 4 404 296 99 28 chr2 4286420 4286633 -248969950 + MIR SINE MIR 32 259 -3 1759 214 84 15 chr2 4287355 4287809 -248968774 - MER66B LTR ERV1 -1 485 1 873 67 0 8 chr2 4287915 4288035 -248968548 + L1PB1 LINE L1 6030 6148 -3 1342 187 45 11 chr2 4289452 4289805 -248966778 + MER50 LTR ERV1 94 458 -276 3033 168 96 30 chr2 4289805 4290958 -248965625 + pTR5 LTR ERV1 35 455 -259 1041 177 112 0 chr2 4290958 4291190 -248965393 + MER50 LTR ERV1 453 710 -24 22 35 0 0 chr2 4291535 4291564 -248965019 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr2 4292960 4292998 -248963585 + AT_rich Low_complexity Low_complexity 1 38 0 360 343 42 0 chr2 4293032 4293175 -248963408 + L1MC4 LINE L1 6768 6916 -1126 257 250 43 9 chr2 4293189 4293305 -248963278 + L1ME3A LINE L1 5993 6112 -58 369 0 0 0 chr2 4293323 4293364 -248963219 + (TG)n Simple_repeat Simple_repeat 2 42 0 349 238 131 52 chr2 4293421 4293673 -248962910 + L1MC4 LINE L1 6958 7229 -813 2238 92 0 14 chr2 4293844 4294139 -248962444 + AluY SINE Alu 1 291 -20 1200 215 63 26 chr2 4294942 4295291 -248961292 + MLT1A1 LTR MaLR 1 362 -3 187 200 0 80 chr2 4296223 4296273 -248960310 + L3 LINE CR1 1188 1233 -344 322 285 45 63 chr2 4297010 4297265 -248959318 - MIR SINE MIR -13 249 1 923 140 6 0 chr2 4297886 4298057 -248958526 + (TG)n Simple_repeat Simple_repeat 2 173 0 1561 189 28 7 chr2 4298340 4298626 -248957957 + AluSx SINE Alu 1 292 -20 194 274 105 32 chr2 4298976 4299071 -248957512 + MIR SINE MIR 116 217 -45 206 235 0 44 chr2 4299184 4299252 -248957331 + GA-rich Low_complexity Low_complexity 4 68 0 263 299 90 68 chr2 4299745 4299922 -248956661 + MIR SINE MIR 22 202 -60 1645 161 84 0 chr2 4300018 4300304 -248956279 + AluSx SINE Alu 1 310 -2 558 266 94 11 chr2 4300868 4301143 -248955440 + AluSx SINE Alu 5 302 0 1006 168 0 0 chr2 4301650 4301805 -248954778 - AluSg/x SINE Alu -3 309 155 590 240 188 41 chr2 4302432 4302848 -248953735 + L1MC4 LINE L1 7103 7579 -463 610 83 0 0 chr2 4302864 4302948 -248953635 + AluY SINE Alu 214 297 -14 22 94 0 0 chr2 4303148 4303212 -248953371 + AT_rich Low_complexity Low_complexity 1 64 0 23 33 0 0 chr2 4303328 4303358 -248953225 + AT_rich Low_complexity Low_complexity 1 30 0 31 44 0 0 chr2 4303609 4303654 -248952929 + AT_rich Low_complexity Low_complexity 1 45 0 1767 226 11 8 chr2 4303842 4304204 -248952379 - MLT1A1 LTR MaLR -2 363 1 195 286 67 84 chr2 4304446 4304565 -248952018 - L2 LINE L2 -1724 1590 1474 29 47 0 0 chr2 4304775 4304818 -248951765 + AT_rich Low_complexity Low_complexity 1 43 0 272 267 0 0 chr2 4304904 4304964 -248951619 + MSTC LTR MaLR 49 108 -320 310 254 25 90 chr2 4306213 4306335 -248950248 + MLT1J LTR MaLR 36 178 -301 1333 162 35 4 chr2 4306996 4307224 -248949359 + AluSg/x SINE Alu 73 307 -5 2334 85 7 0 chr2 4307302 4307596 -248948987 + AluSc SINE Alu 1 296 -13 1965 121 17 17 chr2 4308108 4308397 -248948186 + AluSx SINE Alu 1 289 -23 358 115 16 0 chr2 4308400 4308461 -248948122 - L1MB4 LINE L1 -28 6152 6091 2151 120 13 0 chr2 4308913 4309221 -248947362 - AluSp SINE Alu -1 312 1 3384 238 87 26 chr2 4309340 4309629 -248946954 + MER45B DNA AcHobo 1 271 -1310 2251 173 14 42 chr2 4309629 4310063 -248946520 - MSTB LTR MaLR -4 422 1 3384 238 87 26 chr2 4310063 4310754 -248945829 + MER45B DNA AcHobo 271 1040 0 845 261 28 21 chr2 4310951 4311242 -248945341 - L1PB3 LINE L1 -2986 3160 2868 5646 206 103 4 chr2 4311242 4312605 -248943978 + L1PB3 LINE L1 3186 4683 -1463 2009 173 55 107 chr2 4312595 4312806 -248943777 + L1PB3 LINE L1 5567 5788 -366 * 261 0 0 0 chr2 4312806 4312835 -248943748 + (TG)n Simple_repeat Simple_repeat 2 30 0 2009 173 55 107 chr2 4312835 4312907 -248943676 + L1PB3 LINE L1 5788 5862 -292 273 29 0 0 chr2 4312907 4312941 -248943642 + (TG)n Simple_repeat Simple_repeat 1 34 0 2009 173 55 107 chr2 4312941 4313262 -248943321 + L1PB3 LINE L1 5862 6140 -14 240 35 0 0 chr2 4314113 4314142 -248942441 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 2155 86 0 0 chr2 4314144 4314423 -248942160 - AluY SINE Alu -32 279 1 195 368 35 49 chr2 4316857 4317001 -248939582 - MIR3 SINE MIR -52 156 15 21 0 0 0 chr2 4318094 4318115 -248938468 + AT_rich Low_complexity Low_complexity 1 21 0 236 244 41 32 chr2 4319259 4319382 -248937201 + (TG)n Simple_repeat Simple_repeat 1 124 0 2067 132 6 6 chr2 4319497 4319808 -248936775 + AluSx SINE Alu 1 311 -1 23 0 0 0 chr2 4319904 4319927 -248936656 + AT_rich Low_complexity Low_complexity 1 23 0 2090 180 78 24 chr2 4320911 4321323 -248935260 + Tigger2a DNA MER2_type 1 434 0 1456 196 43 51 chr2 4321534 4321927 -248934656 - MLT1B LTR MaLR 0 390 1 245 109 62 0 chr2 4321984 4322048 -248934535 + (TG)n Simple_repeat Simple_repeat 2 69 0 240 190 6 49 chr2 4322196 4322359 -248934224 + (TG)n Simple_repeat Simple_repeat 1 156 0 401 219 31 31 chr2 4322399 4322559 -248934024 + (TG)n Simple_repeat Simple_repeat 2 161 0 312 294 51 110 chr2 4322663 4322831 -248933752 + L2 LINE L2 2736 2886 -428 2240 116 0 22 chr2 4322831 4323150 -248933433 - AluSx SINE Alu 0 312 1 312 294 51 110 chr2 4323150 4323236 -248933347 + L2 LINE L2 2886 2975 -339 288 130 0 0 chr2 4323467 4323513 -248933070 + (TTTC)n Simple_repeat Simple_repeat 3 48 0 186 150 50 25 chr2 4323643 4323683 -248932900 + L2 LINE L2 2425 2465 -849 363 235 23 68 chr2 4323690 4323822 -248932761 + MER5B DNA MER1_type 23 148 -30 1882 130 7 0 chr2 4323870 4324146 -248932437 + MER61A LTR ERV1 65 342 -1 563 213 5 109 chr2 4325113 4325324 -248931259 - MER53 DNA DNA 0 189 1 1951 121 21 0 chr2 4326092 4326372 -248930211 + AluSx SINE Alu 1 286 -26 261 88 0 53 chr2 4329394 4329451 -248927132 + (TTTTC)n Simple_repeat Simple_repeat 3 56 0 3279 191 14 35 chr2 4329576 4329716 -248926867 + MER4D LTR ERV1 217 358 -545 2712 100 14 0 chr2 4329716 4330066 -248926517 + THE1A LTR MaLR 1 355 0 3279 191 14 35 chr2 4330066 4330617 -248925966 + MER4D LTR ERV1 358 894 -9 4364 114 116 130 chr2 4331197 4332622 -248923961 - pTR5 LTR ERV1 0 2438 743 2574 154 18 0 chr2 4333006 4333402 -248923181 + MER57A LTR ERV1 1 403 0 342 273 27 18 chr2 4333452 4333562 -248923021 + MIR3 SINE MIR 89 199 -9 309 264 213 7 chr2 4333773 4333953 -248922630 - MIR SINE MIR -6 256 38 204 254 0 34 chr2 4335492 4335551 -248921032 + GA-rich Low_complexity Low_complexity 2 58 0 259 272 43 11 chr2 4335835 4335927 -248920656 - L1ME LINE L1 -439 5682 5588 220 222 19 0 chr2 4336184 4336238 -248920345 + (CA)n Simple_repeat Simple_repeat 1 55 0 1978 173 80 0 chr2 4336263 4336575 -248920008 - MER1B DNA MER1_type 0 337 1 4303 307 116 28 chr2 4337428 4337638 -248918945 - L2 LINE L2 -615 2699 2509 185 0 40 0 chr2 4337638 4337663 -248918920 + (TTG)n Simple_repeat Simple_repeat 2 27 0 4303 307 116 28 chr2 4337663 4339303 -248917280 - L2 LINE L2 -805 2509 632 2307 100 0 0 chr2 4339303 4339603 -248916980 + AluSc SINE Alu 1 300 -9 4303 307 116 28 chr2 4339603 4339896 -248916687 - L2 LINE L2 -2682 632 366 1429 237 52 43 chr2 4339940 4340003 -248916580 - MLT1C LTR MaLR -3 464 403 711 170 0 0 chr2 4340003 4340109 -248916474 + U6 snRNA snRNA 1 106 -1 1429 237 52 43 chr2 4340109 4340505 -248916078 - MLT1C LTR MaLR -64 403 1 2358 138 13 16 chr2 4340844 4341220 -248915363 - THE1C LTR MaLR 0 375 1 196 227 23 0 chr2 4341291 4341335 -248915248 - L2 LINE L2 -81 3191 3147 336 225 67 11 chr2 4341720 4341809 -248914774 - MLT1C LTR MaLR 0 467 374 3001 96 0 10 chr2 4343166 4343574 -248913009 + MLT2A1 LTR ERVL 1 404 -40 186 273 64 36 chr2 4343704 4343814 -248912769 + L2 LINE L2 2179 2291 -1023 244 337 23 12 chr2 4344354 4344440 -248912143 - MER5B DNA MER1_type -80 98 12 3409 114 7 0 chr2 4344486 4344935 -248911648 - MLT2A2 LTR ERVL -1 452 1 365 85 0 0 chr2 4345660 4345707 -248910876 - Alu SINE Alu -254 47 1 2551 118 0 3 chr2 4345965 4346320 -248910263 - THE1B LTR MaLR 0 364 11 262 308 34 51 chr2 4346822 4346939 -248909644 - MIR SINE MIR -100 162 48 449 386 55 48 chr2 4350299 4350698 -248905885 + L2 LINE L2 2870 3271 -1 837 183 109 45 chr2 4351029 4351231 -248905352 + MSTD LTR MaLR 1 215 -181 500 223 0 0 chr2 4351274 4351368 -248905215 + MSTD LTR MaLR 303 396 0 190 268 26 72 chr2 4352062 4352215 -248904368 + L2 LINE L2 2279 2424 -890 811 213 12 0 chr2 4353109 4353269 -248903314 + FRAM SINE Alu 1 159 -17 31 0 0 0 chr2 4353452 4353483 -248903100 + AT_rich Low_complexity Low_complexity 1 31 0 271 299 0 0 chr2 4353665 4353742 -248902841 + L1ME1 LINE L1 4522 4598 -1548 * 2744 261 31 27 chr2 4353738 4355093 -248901490 + L1ME1 LINE L1 4801 6162 -4 963 145 0 0 chr2 4355101 4355273 -248901310 + (TA)n Simple_repeat Simple_repeat 1 172 0 2049 151 53 34 chr2 4355297 4355654 -248900929 - THE1B LTR MaLR 0 364 1 2162 77 37 3 chr2 4555730 4556028 -248700555 + AluSx SINE Alu 1 308 -4 394 208 69 10 chr2 4556546 4556647 -248699936 - L1MC/D LINE L1 -2017 5768 5662 276 197 70 14 chr2 4556746 4556817 -248699766 + MER58C DNA MER1_type 127 201 -14 210 309 52 0 chr2 4557897 4557994 -248698589 + MIR SINE MIR 151 252 -10 243 267 0 69 chr2 4558195 4558311 -248698272 + G-rich Low_complexity Low_complexity 6 113 0 686 168 18 13 chr2 4559734 4559965 -248696618 + (CCCA)n Simple_repeat Simple_repeat 1 232 0 484 243 12 0 chr2 4559983 4560152 -248696431 + (TCCA)n Simple_repeat Simple_repeat 1 171 0 * 582 188 28 11 chr2 4560125 4560301 -248696282 + (CCCA)n Simple_repeat Simple_repeat 2 180 0 192 301 55 0 chr2 4565022 4565095 -248691488 - L2 LINE L2 -220 3052 2976 476 265 49 54 chr2 4567062 4567266 -248689317 - MIR SINE MIR -40 222 20 270 302 129 14 chr2 4572498 4572637 -248683946 - MIR SINE MIR -1 261 107 1315 213 33 26 chr2 4572798 4573103 -248683480 - MER44D DNA MER2_type -30 579 3 450 0 0 0 chr2 4573113 4573163 -248683420 + (TG)n Simple_repeat Simple_repeat 2 51 0 406 298 78 5 chr2 4573545 4573736 -248682847 + MIR SINE MIR 36 240 -22 205 216 83 49 chr2 4574007 4574121 -248682462 + MIR SINE MIR 11 139 -69 2205 104 0 0 chr2 4575502 4575800 -248680783 + AluSg SINE Alu 6 303 -7 357 323 110 16 chr2 4576240 4576526 -248680057 - L1ME LINE L1 -285 5836 5520 375 295 65 35 chr2 4576877 4577077 -248679506 - L2 LINE L2 -4 3309 3104 233 371 32 27 chr2 4577373 4577559 -248679024 - L2 LINE L2 -629 2685 2499 1737 141 0 14 chr2 4578128 4578405 -248678178 + AluSx SINE Alu 1 273 -39 1673 151 3 49 chr2 4580372 4580676 -248675907 + AluJo SINE Alu 1 290 -22 6698 196 160 9 chr2 4580724 4582356 -248674227 + L1PBa LINE L1 7 1884 -4979 3685 133 22 8 chr2 4582358 4583387 -248673196 + L1P5 LINE L1 4751 5794 -357 441 0 0 0 chr2 4583387 4583436 -248673147 + (TA)n Simple_repeat Simple_repeat 2 50 0 3685 133 22 8 chr2 4583436 4583463 -248673120 + L1P5 LINE L1 5794 5819 -332 2131 114 0 16 chr2 4585071 4585387 -248671196 + AluSx SINE Alu 1 311 -1 21 0 0 0 chr2 4585387 4585408 -248671175 + AT_rich Low_complexity Low_complexity 1 21 0 1694 229 8 30 chr2 4586162 4586534 -248670049 + MLT1A1 LTR MaLR 1 364 -1 21 36 0 0 chr2 4586812 4586840 -248669743 + AT_rich Low_complexity Low_complexity 1 28 0 296 48 24 0 chr2 4586869 4586911 -248669672 + (TTTTA)n Simple_repeat Simple_repeat 1 43 0 231 114 0 0 chr2 4586912 4586947 -248669636 + (CGTTG)n Simple_repeat Simple_repeat 1 35 0 1928 150 0 0 chr2 4586949 4587236 -248669347 - AluSx SINE Alu -25 287 1 1433 176 3 102 chr2 4587501 4587825 -248668758 + AluJb SINE Alu 1 292 -20 393 136 0 0 chr2 4588461 4588527 -248668056 + (GGGA)n Simple_repeat Simple_repeat 1 66 0 210 240 0 20 chr2 4590782 4590832 -248665751 + CT-rich Low_complexity Low_complexity 6 54 0 2145 96 10 0 chr2 4591850 4592152 -248664431 - AluSp SINE Alu -8 305 1 1830 143 24 0 chr2 4592880 4593167 -248663416 - AluSx SINE Alu -16 296 3 1224 266 65 54 chr2 4593194 4593731 -248662852 - L1ME1 LINE L1 -35 6131 5589 23 0 0 0 chr2 4594172 4594195 -248662388 + AT_rich Low_complexity Low_complexity 1 23 0 293 285 81 16 chr2 4595362 4595485 -248661098 - MIR SINE MIR -107 155 25 1837 130 74 0 chr2 4595540 4595824 -248660759 + AluSx SINE Alu 1 305 -7 207 0 0 0 chr2 4597926 4597949 -248658634 + (A)n Simple_repeat Simple_repeat 1 23 0 282 344 33 0 chr2 4598161 4598283 -248658300 - L2 LINE L2 -5 3308 3183 390 338 24 29 chr2 4599831 4600038 -248656545 + MIR SINE MIR 51 256 -6 1443 103 15 15 chr2 4604038 4604241 -248652342 + AluSq SINE Alu 2 204 -109 242 311 25 43 chr2 4605029 4605190 -248651393 - MIR3 SINE MIR -3 205 48 1657 156 33 0 chr2 4607597 4607841 -248648742 + AluJb SINE Alu 13 264 -48 667 224 44 6 chr2 4610339 4610522 -248646061 - L1MC4a LINE L1 -1951 5857 5668 333 195 37 49 chr2 4611362 4611444 -248645139 - L1MC4 LINE L1 -1326 6716 6636 218 269 0 0 chr2 4611752 4611804 -248644779 + GA-rich Low_complexity Low_complexity 1 52 0 553 271 109 35 chr2 4612281 4612621 -248643962 - MLT1J1 LTR MaLR -2 444 80 528 325 92 14 chr2 4613819 4614332 -248642251 - HAL1 LINE L1 -988 1519 967 2380 71 0 20 chr2 4615717 4616044 -248640539 + AluY SINE Alu 1 321 0 196 244 233 11 chr2 4616067 4616157 -248640426 - MIR SINE MIR -133 129 20 396 233 0 69 chr2 4616204 4616393 -248640190 + (CACAC)n Simple_repeat Simple_repeat 2 177 0 391 257 5 59 chr2 4616431 4616618 -248639965 + (CACAC)n Simple_repeat Simple_repeat 2 178 0 191 150 25 25 chr2 4617321 4617361 -248639222 - L2 LINE L2 -6 3307 3268 1036 252 66 7 chr2 4617373 4617647 -248638936 + L1MD2 LINE L1 6060 6349 -10 567 265 117 47 chr2 4618607 4618966 -248637617 - MLT1J2 LTR MaLR 0 450 67 757 160 56 0 chr2 4619109 4619234 -248637349 + AluJb SINE Alu 2 133 -179 1870 164 16 3 chr2 4619250 4619554 -248637029 + AluJb SINE Alu 1 308 -4 282 315 40 20 chr2 4619724 4619873 -248636710 + L1ME4a LINE L1 333 484 -5912 1648 198 60 11 chr2 4620490 4620843 -248635740 - MLT1A2 LTR MaLR -4 370 1 862 270 35 76 chr2 4620850 4620950 -248635633 + L1ME4a LINE L1 793 896 -5513 1038 212 38 19 chr2 4620950 4621162 -248635421 - MER20 DNA MER1_type -3 216 1 862 270 35 76 chr2 4621162 4621665 -248634918 + L1ME4a LINE L1 896 1371 -5038 2313 256 44 13 chr2 4621668 4622433 -248634150 + L1ME4a LINE L1 3760 4548 -1858 1409 221 143 20 chr2 4622435 4622923 -248633660 + L1ME4a LINE L1 5029 5576 -830 829 191 114 0 chr2 4622921 4623141 -248633442 - L1PA16 LINE L1 -1 6165 5921 * 213 154 0 0 chr2 4623938 4623977 -248632606 + (TG)n Simple_repeat Simple_repeat 1 39 0 701 289 39 10 chr2 4625295 4625499 -248631084 + MER58A DNA MER1_type 15 224 0 471 256 93 69 chr2 4625940 4626361 -248630222 + L1ME4a LINE L1 5877 6307 -74 8643 186 39 14 chr2 4626839 4628809 -248627774 + L1MA9 LINE L1 2897 4915 -1231 7292 126 18 129 chr2 4628812 4630414 -248626169 + Tigger4(Zombi) DNA MER2_type 4 1427 -1304 2169 137 35 30 chr2 4630414 4630787 -248625796 - THE1C LTR MaLR 0 375 1 9426 114 59 45 chr2 4630787 4632345 -248624238 - THE1B-int LTR MaLR 0 1580 1 2402 119 34 8 chr2 4632346 4632700 -248623883 - THE1B LTR MaLR -1 363 1 5078 159 36 22 chr2 4632702 4633849 -248622734 + L1MA9 LINE L1 5071 6200 -112 1770 190 0 0 chr2 4633849 4634128 -248622455 + AluJo SINE Alu 1 279 -33 375 23 0 0 chr2 4634128 4634172 -248622411 + (CA)n Simple_repeat Simple_repeat 1 44 0 5078 159 36 22 chr2 4634172 4634236 -248622347 + L1MA9 LINE L1 6199 6307 -5 895 243 38 0 chr2 4639306 4639516 -248617067 - MER20 DNA MER1_type 0 219 2 1007 214 43 12 chr2 4641401 4641658 -248614925 + MLT1B LTR MaLR 1 265 -125 889 179 11 11 chr2 4641701 4641880 -248614703 + MLT1B LTR MaLR 23 201 -189 485 268 94 24 chr2 4643153 4643407 -248613176 + HAL1 LINE L1 578 849 -1658 664 287 142 12 chr2 4643644 4643982 -248612601 + HAL1 LINE L1 1162 1543 -964 476 284 130 41 chr2 4643997 4644257 -248612326 + HAL1 LINE L1 1584 1874 -633 7136 92 34 9 chr2 4644257 4645202 -248611381 - LTR5 LTR ERVK -1 968 1 476 284 130 41 chr2 4645202 4645233 -248611350 + HAL1 LINE L1 1874 1901 -606 1262 220 116 25 chr2 4645400 4645796 -248610787 - MLT1C LTR MaLR 0 467 36 289 279 0 0 chr2 4646101 4646187 -248610396 + LTR67 LTR ERVL 468 553 -4 361 82 0 0 chr2 4646337 4646386 -248610197 - MADE1 DNA Mariner 0 80 32 490 284 28 11 chr2 4649831 4650007 -248606576 + (TG)n Simple_repeat Simple_repeat 1 179 0 407 220 28 34 chr2 4650045 4650378 -248606205 + (TATG)n Simple_repeat Simple_repeat 1 331 0 337 246 23 14 chr2 4650385 4650746 -248605837 + (TG)n Simple_repeat Simple_repeat 1 364 0 216 149 0 0 chr2 4651416 4651463 -248605120 + (A)n Simple_repeat Simple_repeat 1 47 0 2238 125 0 3 chr2 4651465 4651777 -248604806 + AluSx SINE Alu 1 311 -1 214 235 86 37 chr2 4651961 4652042 -248604541 - MIR SINE MIR -58 150 66 886 294 95 33 chr2 4652331 4653049 -248603534 + HAL1 LINE L1 597 1358 -1149 421 267 59 72 chr2 4653145 4653366 -248603217 + MIR SINE MIR 45 262 0 470 274 150 16 chr2 4653372 4653678 -248602905 + HAL1 LINE L1 1441 1787 -720 773 244 101 0 chr2 4653978 4654195 -248602388 + MIR SINE MIR 14 252 -10 720 225 62 72 chr2 4654544 4654937 -248601646 + LTR42 LTR ERVL 4 478 -17 2677 87 6 0 chr2 4654970 4655327 -248601256 - THE1B LTR MaLR -5 359 1 186 356 37 37 chr2 4655792 4655927 -248600656 + L2 LINE L2 3138 3272 0 209 189 0 0 chr2 4655929 4655966 -248600617 + (TGAG)n Simple_repeat Simple_repeat 1 37 0 263 266 156 18 chr2 4656041 4656150 -248600433 - L2 LINE L2 -1 3271 3148 565 348 74 40 chr2 4657914 4658291 -248598292 + HAL1 LINE L1 1039 1428 -1079 2303 123 0 0 chr2 4658294 4658603 -248597980 - AluSx SINE Alu -3 309 1 405 293 151 52 chr2 4658613 4658978 -248597605 + L1MC4a LINE L1 5766 6166 -1642 429 283 123 42 chr2 4658997 4659209 -248597374 - MLT1I LTR MaLR -66 343 115 1100 244 139 11 chr2 4659543 4660308 -248596275 + L1M4 LINE L1 1643 2527 -3855 871 243 17 0 chr2 4660317 4660498 -248596085 + MER8 DNA MER2_type 1 184 -55 2004 209 51 6 chr2 4660498 4660971 -248595612 + L1M4 LINE L1 4939 5432 -950 706 190 8 0 chr2 4660971 4661092 -248595491 + FLAM_C SINE Alu 9 130 -13 1716 197 0 10 chr2 4661096 4661390 -248595193 + AluJo SINE Alu 3 293 -19 1671 166 40 3 chr2 4661393 4661790 -248594793 + L1M4 LINE L1 5456 5865 -555 229 328 46 15 chr2 4661800 4661931 -248594652 + HAL1b LINE L1 387 521 -827 265 301 52 22 chr2 4662469 4662605 -248593978 + L1M4c LINE L1 3831 3970 -2412 1173 325 130 44 chr2 4662614 4662894 -248593689 + L1M4c LINE L1 4109 4364 -2018 282 29 0 0 chr2 4662894 4662929 -248593654 + (CA)n Simple_repeat Simple_repeat 2 36 0 1173 325 130 44 chr2 4662929 4663543 -248593040 + L1M4c LINE L1 4364 5080 -1302 1086 248 105 16 chr2 4663560 4663874 -248592709 + MER2 DNA MER2_type 1 342 -2 744 315 22 8 chr2 4663906 4664139 -248592444 + MIR SINE MIR 11 241 -21 222 307 0 50 chr2 4664825 4664926 -248591657 + (CACG)n Simple_repeat Simple_repeat 3 98 0 4151 154 37 47 chr2 4668382 4669376 -248587207 - MER11C LTR ERVK 0 1071 1 2463 39 3 3 chr2 4671801 4672084 -248584499 - AluY SINE Alu -28 283 1 467 312 40 6 chr2 4672896 4673069 -248583514 - MIR SINE MIR -26 236 58 334 274 150 65 chr2 4673581 4673921 -248582662 + MLT1E LTR MaLR 285 592 -1 273 270 108 9 chr2 4674006 4674117 -248582466 - MIR SINE MIR -59 149 28 654 228 206 9 chr2 4675241 4675460 -248581123 + MLT1L LTR MaLR 349 610 -5 497 298 44 39 chr2 4675562 4675767 -248580816 + MIR SINE MIR 47 252 -10 186 143 0 0 chr2 4676615 4676650 -248579933 + (CCCA)n Simple_repeat Simple_repeat 4 38 0 372 274 177 26 chr2 4677435 4677745 -248578838 + MARNA DNA Mariner 26 382 -204 837 274 95 3 chr2 4678527 4678906 -248577677 + L1MDa LINE L1 16 429 -6111 2243 201 52 17 chr2 4679141 4679659 -248576924 + L1MC1 LINE L1 5786 6321 -12 272 245 13 8 chr2 4679819 4679915 -248576668 - MLT1J2 LTR MaLR -309 141 70 323 158 11 116 chr2 4680038 4680104 -248576479 - L1PA15 LINE L1 -172 5993 5938 2336 86 3 29 chr2 4680104 4680418 -248576165 - AluSx SINE Alu -6 306 1 323 158 11 116 chr2 4680418 4680446 -248576137 - L1PA15 LINE L1 -227 5938 5909 948 153 25 0 chr2 4680454 4680617 -248575966 + L1PA15 LINE L1 5995 6161 -4 23 0 0 0 chr2 4680618 4680641 -248575942 + AT_rich Low_complexity Low_complexity 1 23 0 23 68 0 0 chr2 4682810 4682854 -248573729 + AT_rich Low_complexity Low_complexity 1 44 0 2015 66 4 0 chr2 4683330 4683587 -248572996 - L1PA5 LINE L1 0 6154 5897 320 124 8 63 chr2 4683903 4683975 -248572608 + MLT1A2 LTR MaLR 1 67 -307 1578 222 18 0 chr2 4683978 4684311 -248572272 - MER47A DNA MER2_type 0 366 28 1210 198 62 21 chr2 4684328 4684616 -248571967 + MLT1A2 LTR MaLR 75 374 0 1637 126 20 0 chr2 4689347 4689594 -248566989 + MER1B DNA MER1_type 1 252 -87 293 259 77 21 chr2 4689710 4689853 -248566730 + ERVL LTR ERVL 2543 2693 -3071 569 210 109 0 chr2 4689893 4690031 -248566552 + MER58C DNA MER1_type 61 213 -2 365 314 26 0 chr2 4691076 4691232 -248565351 + ERVL LTR ERVL 3153 3312 -2342 358 154 15 70 chr2 4691364 4691712 -248564871 + (CTCA)n Simple_repeat Simple_repeat 1 328 0 431 329 7 0 chr2 4691976 4692131 -248564452 + ERVL LTR ERVL 3777 3932 -1832 255 145 197 40 chr2 4692406 4692449 -248564134 + LTR33A LTR ERVL 434 469 -54 15088 127 22 17 chr2 4692449 4694855 -248561728 - Tigger1 DNA MER2_type 0 2418 1 255 145 197 40 chr2 4694855 4694887 -248561696 + LTR33A LTR ERVL 469 521 -2 199 377 8 16 chr2 4694939 4695061 -248561522 - L2 LINE L2 -950 2364 2244 710 327 111 44 chr2 4695172 4696118 -248560465 + L1MEd LINE L1 79 1087 -5032 548 296 145 88 chr2 4696171 4697065 -248559518 + L1MEd LINE L1 1234 2178 -4132 564 89 0 0 chr2 4697218 4697297 -248559286 + (GGGA)n Simple_repeat Simple_repeat 3 81 0 2370 156 19 28 chr2 4698155 4698352 -248558231 + MSTB LTR MaLR 2 199 -227 1881 124 6 70 chr2 4698352 4698496 -248558087 + AluSx SINE Alu 3 155 -157 2290 108 0 0 chr2 4698496 4698801 -248557782 + AluSx SINE Alu 1 305 -7 1881 124 6 70 chr2 4698801 4698986 -248557597 + AluSx SINE Alu 155 311 -1 2370 156 19 28 chr2 4698986 4699217 -248557366 + MSTB LTR MaLR 199 426 0 7793 184 61 9 chr2 4699219 4700787 -248555796 + MSTB-int LTR MaLR 3 1651 0 2023 162 70 15 chr2 4700787 4701189 -248555394 + MSTB LTR MaLR 1 424 -2 209 289 64 80 chr2 4701622 4701809 -248554774 - MIR3 SINE MIR -17 191 8 259 320 150 10 chr2 4702093 4702293 -248554290 + MIR SINE MIR 32 259 -3 2298 124 0 0 chr2 4702493 4702799 -248553784 + AluSx SINE Alu 1 306 -6 2531 131 48 15 chr2 4703065 4703638 -248552945 + MER4E LTR ERV1 1 756 -10 2475 209 48 52 chr2 4704514 4705226 -248551357 + L1MD2 LINE L1 5650 6358 -1 2303 107 13 0 chr2 4705362 4705662 -248550921 - AluSx SINE Alu -4 308 5 237 351 0 11 chr2 4705980 4706074 -248550509 + (CA)n Simple_repeat Simple_repeat 2 94 0 247 316 94 0 chr2 4706581 4706698 -248549885 + L2 LINE L2 3140 3267 -5 243 0 0 0 chr2 4709102 4709129 -248547454 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 803 257 72 61 chr2 4709813 4710307 -248546276 + L1ME LINE L1 28 5189 -957 2284 105 0 0 chr2 4710394 4710680 -248545903 + AluSg SINE Alu 1 286 -24 393 75 0 0 chr2 4710683 4710736 -248545847 + (GGGA)n Simple_repeat Simple_repeat 4 56 0 1202 234 49 28 chr2 4710753 4711196 -248545387 + L1ME LINE L1 5188 5638 -528 718 341 63 14 chr2 4711563 4712058 -248544525 + HERV16 LTR ERVL 1765 2283 -3481 716 347 63 6 chr2 4712131 4712494 -248544089 + HERV16 LTR ERVL 2357 2740 -2256 349 309 18 18 chr2 4712621 4712731 -248543852 + HERV16 LTR ERVL 2953 3062 -1934 428 336 77 6 chr2 4712792 4713155 -248543428 + HERV16 LTR ERVL 3143 3531 -1954 2153 164 59 82 chr2 4714036 4714596 -248541987 - L1MA8 LINE L1 -17 6274 5728 2214 62 29 0 chr2 4714868 4715168 -248541415 - AluSg SINE Alu 0 308 1 487 249 40 57 chr2 4715912 4716089 -248540494 - MIR3 SINE MIR -1 207 34 253 274 38 28 chr2 4717293 4717399 -248539184 + HERV16 LTR ERVL 2046 2152 -2844 313 163 35 47 chr2 4719299 4719385 -248537198 + MIR SINE MIR 60 144 -118 786 61 0 0 chr2 4721161 4721260 -248535323 - THE1A LTR MaLR -256 99 1 855 226 79 39 chr2 4721401 4721680 -248534903 - L1MB2 LINE L1 -53 6118 5829 926 170 0 0 chr2 4721760 4721901 -248534682 + AluJb SINE Alu 1 141 -171 2313 108 0 0 chr2 4721906 4722202 -248534381 + AluY SINE Alu 1 296 -15 2228 49 0 0 chr2 4722233 4722520 -248534063 + L1PA8 LINE L1 5885 6171 -1 1195 149 0 0 chr2 4722598 4722772 -248533811 + AluJb SINE Alu 129 302 -10 230 290 86 11 chr2 4722784 4722877 -248533706 - MLT1D LTR MaLR 0 505 406 * 889 251 146 25 chr2 4722872 4723278 -248533305 - MLT1E2 LTR MaLR -154 470 9 364 334 58 8 chr2 4723307 4723597 -248532986 - L2 LINE L2 -220 3052 2687 2940 197 20 6 chr2 4725846 4726497 -248530086 + L1MB3 LINE L1 5520 6179 -4 251 228 0 0 chr2 4726957 4727014 -248529569 + L1MB7 LINE L1 5350 5406 -764 233 186 0 0 chr2 4727049 4727092 -248529491 + L1MB7 LINE L1 5364 5406 -764 225 209 0 0 chr2 4727131 4727174 -248529409 + L1MB7 LINE L1 5364 5406 -764 1133 195 8 7 chr2 4727214 4727468 -248529115 + L1MB7 LINE L1 5363 5585 -599 2299 116 0 26 chr2 4727483 4727537 -248529046 - L1PB1 LINE L1 -2 6149 6095 2323 114 0 0 chr2 4727537 4727843 -248528740 - AluSx SINE Alu -6 306 1 2299 116 0 26 chr2 4727843 4728166 -248528417 - L1PB1 LINE L1 -56 6095 5782 419 234 43 21 chr2 4728166 4728251 -248528332 + L1MC4 LINE L1 6614 6703 -1339 1270 73 0 6 chr2 4728251 4728428 -248528155 - L1PB1 LINE L1 -359 5792 5617 * 1798 251 38 36 chr2 4728423 4728827 -248527756 + L1MB7 LINE L1 5591 5998 -186 1704 122 35 52 chr2 4728827 4729113 -248527470 + AluJb SINE Alu 6 286 -26 1798 251 38 36 chr2 4729113 4729289 -248527294 + L1MB7 LINE L1 5998 6172 -12 2246 93 0 0 chr2 4729326 4729605 -248526978 - AluSc SINE Alu -30 279 1 506 237 0 0 chr2 4730356 4730610 -248525973 + (CA)n Simple_repeat Simple_repeat 1 254 0 195 250 0 0 chr2 4730634 4730734 -248525849 + (CA)n Simple_repeat Simple_repeat 1 100 0 336 222 3 45 chr2 4730782 4731163 -248525420 + (CA)n Simple_repeat Simple_repeat 1 364 0 200 275 17 6 chr2 4731218 4731396 -248525187 + (CA)n Simple_repeat Simple_repeat 1 180 0 305 290 196 0 chr2 4732123 4732261 -248524322 - MIR SINE MIR -20 242 78 288 295 95 0 chr2 4734601 4734706 -248521877 + L2 LINE L2 3108 3222 -50 280 252 0 15 chr2 4736365 4736496 -248520087 + (CA)n Simple_repeat Simple_repeat 1 129 0 566 268 82 55 chr2 4737023 4737243 -248519340 + MIR SINE MIR 20 245 -17 353 336 34 0 chr2 4738723 4738872 -248517711 + MIR SINE MIR 58 211 -51 412 280 177 0 chr2 4739128 4739303 -248517280 + MIR SINE MIR 57 262 0 8801 101 4 4 chr2 4940978 4942261 -248314322 - L1P LINE L1 -1759 4387 3105 205 196 11 11 chr2 4942363 4942455 -248314128 + (CATTC)n Satellite Satellite 3 94 0 731 175 0 29 chr2 4942466 4942986 -248313597 + (CATTC)n Satellite Satellite 1 505 0 709 177 2 2 chr2 4943040 4943546 -248313037 + (CATTC)n Satellite Satellite 1 506 0 389 178 8 0 chr2 4943559 4943677 -248312906 + (CATTC)n Satellite Satellite 3 121 0 181 266 166 71 chr2 4944325 4944633 -248311950 - L3 LINE CR1 -246 1331 995 366 42 0 0 chr2 4944723 4944771 -248311812 + (CA)n Simple_repeat Simple_repeat 1 48 0 24 53 0 0 chr2 4944808 4944846 -248311737 + AT_rich Low_complexity Low_complexity 1 38 0 422 264 4 16 chr2 4944870 4945113 -248311470 - L1MA9 LINE L1 -38 6274 5989 228 67 0 0 chr2 4945260 4945290 -248311293 + (TA)n Simple_repeat Simple_repeat 2 31 0 2242 108 0 0 chr2 4945973 4946270 -248310313 + AluSg SINE Alu 6 302 -8 27 29 0 0 chr2 4946270 4946304 -248310279 + AT_rich Low_complexity Low_complexity 1 34 0 290 247 47 12 chr2 4946571 4946656 -248309927 + MIR SINE MIR 104 191 -71 415 217 12 12 chr2 4946667 4946750 -248309833 + MER30 DNA MER1_type 148 230 0 265 312 35 29 chr2 4946767 4946940 -248309643 + L1MEc LINE L1 1908 2081 -4315 763 216 161 6 chr2 4947100 4947421 -248309162 - Tigger6 DNA MER2_type 0 1597 1148 11792 153 32 5 chr2 4947465 4947798 -248308785 + Tigger1 DNA MER2_type 1 324 -2094 2183 125 143 8 chr2 4947798 4948175 -248308408 + MSTA LTR MaLR 1 428 0 11792 153 32 5 chr2 4948175 4949821 -248306762 + Tigger1 DNA MER2_type 324 2033 -385 3554 194 28 14 chr2 4949922 4951145 -248305438 - L1MA9 LINE L1 -432 5880 4636 1651 174 57 3 chr2 4951145 4951427 -248305156 + AluSp SINE Alu 1 297 -16 3554 194 28 14 chr2 4951427 4951555 -248305028 - L1MA9 LINE L1 -1676 4636 4511 293 0 27 0 chr2 4951557 4951594 -248304989 + (TTTA)n Simple_repeat Simple_repeat 3 40 0 4582 17 0 0 chr2 4951594 4952116 -248304467 - L1PA2 LINE L1 -13 6142 5621 3081 15 0 0 chr2 4952116 4952503 -248304080 + L1PA2 LINE L1 5227 5613 -542 1227 183 28 37 chr2 4952499 4952694 -248303889 - L1MA9 LINE L1 -1624 4522 4330 * 2159 122 0 0 chr2 4952694 4952989 -248303594 + AluSx SINE Alu 11 305 -7 1227 183 28 37 chr2 4952989 4953115 -248303468 - L1MA9 LINE L1 -1816 4330 4204 368 241 127 16 chr2 4953323 4953568 -248303015 - L1M4 LINE L1 -3070 3076 2805 308 347 141 38 chr2 4954080 4954449 -248302134 - L2 LINE L2 -4 3268 2862 1711 164 66 101 chr2 4954659 4955085 -248301498 - MSTB LTR MaLR -15 411 1 359 352 73 24 chr2 4955671 4955918 -248300665 - L2 LINE L2 -468 2846 2588 1106 264 151 37 chr2 4955932 4956352 -248300231 + MLT2B1 LTR ERVL 3 482 -38 955 89 13 0 chr2 4956352 4956509 -248300074 + (TCTA)n Simple_repeat Simple_repeat 4 162 0 1106 264 151 37 chr2 4956509 4956553 -248300030 + MLT2B1 LTR ERVL 482 520 0 3531 176 42 90 chr2 4956906 4958177 -248298406 + L1PB3 LINE L1 4942 6154 0 2185 92 0 7 chr2 4959126 4959420 -248297163 + AluSc SINE Alu 1 292 -17 249 378 44 7 chr2 4960035 4960170 -248296413 + MIR SINE MIR 46 185 -77 206 62 31 0 chr2 4960366 4960398 -248296185 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 243 136 45 0 chr2 4960399 4960443 -248296140 - MER5B DNA MER1_type -132 46 1 327 280 64 45 chr2 4960471 4960628 -248295955 - MER105 DNA DNA -1 203 44 457 282 48 62 chr2 4960692 4960901 -248295682 + MER63A DNA MER1_type 2 207 -3 200 322 67 22 chr2 4961474 4961564 -248295019 + L3 LINE CR1 1169 1262 -315 432 294 32 24 chr2 4961666 4961792 -248294791 + L3 LINE CR1 1450 1576 -1 607 116 45 18 chr2 4962161 4962273 -248294310 + L1PB2 LINE L1 5677 5791 -360 254 160 13 53 chr2 4962385 4962460 -248294123 + (TA)n Simple_repeat Simple_repeat 1 72 0 2175 97 54 26 chr2 4962461 4962810 -248293773 + L1PB2 LINE L1 5789 6147 -4 1698 130 85 4 chr2 4963439 4963709 -248292874 - AluSx SINE Alu -12 300 9 315 273 0 0 chr2 4964166 4964243 -248292340 - L1MC4 LINE L1 -1350 6692 6616 27 29 0 0 chr2 4964276 4964310 -248292273 + AT_rich Low_complexity Low_complexity 1 34 0 184 344 16 88 chr2 4964373 4964498 -248292085 - MIR SINE MIR -59 149 34 24 32 0 0 chr2 4965141 4965172 -248291411 + AT_rich Low_complexity Low_complexity 1 31 0 207 315 82 86 chr2 4966441 4966708 -248289875 + L2 LINE L2 2228 2493 -821 229 316 158 8 chr2 4966774 4966907 -248289676 - MIR SINE MIR 0 262 110 234 354 85 0 chr2 4967099 4967181 -248289402 - L2 LINE L2 -12 3260 3172 27 0 0 0 chr2 4968740 4968767 -248287816 + AT_rich Low_complexity Low_complexity 1 27 0 6776 70 13 1 chr2 4969740 4971311 -248285272 - L1PA7 LINE L1 -4 6150 4564 16969 29 0 0 chr2 4971411 4974195 -248282388 + L1PA2 LINE L1 3372 6155 0 29 47 0 0 chr2 4974576 4974619 -248281964 + AT_rich Low_complexity Low_complexity 1 43 0 190 308 199 13 chr2 4975084 4975240 -248281343 + MIR SINE MIR 37 221 -41 220 363 12 0 chr2 4975476 4975556 -248281027 - L2 LINE L2 -212 3060 2980 1533 200 64 6 chr2 4977053 4977398 -248279185 + MLT2D LTR ERVL 1 365 -49 280 228 51 13 chr2 4978366 4978445 -248278138 + MIR SINE MIR 110 191 -71 944 270 58 70 chr2 4978961 4979461 -248277122 + MLT1L LTR MaLR 79 572 -43 792 253 13 17 chr2 4979946 4980179 -248276404 - MER72 LTR ERV1 -243 479 248 206 313 50 38 chr2 4981813 4981893 -248274690 - L2 LINE L2 -5 3267 3187 289 258 0 0 chr2 4982324 4982417 -248274166 - Charlie7 DNA MER1_type -1937 675 583 435 218 122 20 chr2 4982482 4982629 -248273954 - Charlie7 DNA MER1_type -2130 482 321 23 78 0 0 chr2 4982766 4982817 -248273766 + AT_rich Low_complexity Low_complexity 1 51 0 357 314 47 23 chr2 4983591 4983763 -248272820 + MIR SINE MIR 28 203 -59 875 254 6 0 chr2 4984510 4984691 -248271892 + MER5A DNA MER1_type 8 189 0 224 254 51 0 chr2 4985159 4985218 -248271365 - MIR SINE MIR -55 153 92 34 65 0 0 chr2 4985572 4985634 -248270949 + AT_rich Low_complexity Low_complexity 1 62 0 214 278 11 78 chr2 4985688 4985778 -248270805 + L2 LINE L2 3189 3272 0 1492 204 6 19 chr2 4987094 4987407 -248269176 - AluJb SINE Alu -1 311 3 255 247 78 26 chr2 4987447 4987524 -248269059 - MIR SINE MIR -179 83 3 255 321 46 30 chr2 4987646 4987777 -248268806 + MIR SINE MIR 99 231 -31 279 315 94 26 chr2 4990277 4990544 -248266039 - L1MEc LINE L1 -4579 1817 1533 675 212 0 0 chr2 4990565 4990683 -248265900 + FLAM_C SINE Alu 1 118 -15 319 270 86 40 chr2 4990828 4991002 -248265581 - L1M4 LINE L1 -2281 3865 3684 337 320 99 41 chr2 4991088 4991453 -248265130 - L1M4 LINE L1 -2642 3504 3119 289 289 41 38 chr2 4991966 4992232 -248264351 - L1M4 LINE L1 -3523 2623 2357 457 341 102 23 chr2 4994270 4994751 -248261832 - L1ME4a LINE L1 -24 6097 5579 1109 254 0 0 chr2 4994830 4995070 -248261513 + MLT1A1 LTR MaLR 125 364 -1 2131 155 111 5 chr2 4995225 4995612 -248260971 - MSTA LTR MaLR 0 428 1 8336 193 25 11 chr2 4995612 4997241 -248259342 - MSTA-int LTR MaLR 0 1651 1 1562 202 141 5 chr2 4997241 4997618 -248258965 - MSTA LTR MaLR 0 428 1 3523 278 49 43 chr2 4999175 4999235 -248257348 + L1M4 LINE L1 11 69 -6786 1572 206 0 3 chr2 4999235 4999547 -248257036 - AluJo SINE Alu 0 311 1 3523 278 49 43 chr2 4999547 5001235 -248255348 + L1M4 LINE L1 69 1792 -5063 1035 242 50 108 chr2 5001242 5002420 -248254163 + L1M4 LINE L1 2230 3265 -3692 1131 256 99 11 chr2 5002566 5002613 -248253970 + L1M4 LINE L1 3245 3286 -3671 4195 39 8 2 chr2 5002613 5003153 -248253430 + L1PA4 LINE L1 5621 6163 0 1131 256 99 11 chr2 5003153 5003628 -248252955 + L1M4 LINE L1 3286 3814 -3143 2727 225 19 0 chr2 5003691 5004203 -248252380 + L1P4 LINE L1 53 574 -6265 * 3594 228 50 27 chr2 5004192 5005348 -248251235 + L1P4 LINE L1 1849 3031 -3818 4035 203 48 14 chr2 5005348 5005617 -248250966 + L1P4 LINE L1 4935 5193 -1671 1825 176 80 5 chr2 5005617 5006015 -248250568 + MSTA LTR MaLR 1 428 0 4035 203 48 14 chr2 5006015 5006936 -248249647 + L1P4 LINE L1 5193 6163 -701 5011 148 17 1 chr2 5007036 5007869 -248248714 + L1PA16 LINE L1 5312 6157 -9 444 311 12 38 chr2 5007891 5008316 -248248267 + L1M4 LINE L1 3866 4279 -2678 2684 36 0 3 chr2 5008535 5008844 -248247739 - AluY SINE Alu -3 308 1 3987 20 0 0 chr2 5009235 5009693 -248246890 - L1PA3 LINE L1 0 6155 5698 5105 30 0 0 chr2 5009693 5010317 -248246266 + L1P LINE L1 4749 5372 -774 3297 137 32 35 chr2 5010880 5011480 -248245103 - Tigger1 DNA MER2_type 0 2418 1821 1585 85 89 4 chr2 5012347 5012593 -248243990 - L1PA11 LINE L1 -10 6164 5898 5661 156 60 9 chr2 5012593 5012708 -248243875 - Tigger1 DNA MER2_type -581 1837 1729 207 0 0 0 chr2 5012708 5012731 -248243852 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 5661 156 60 9 chr2 5012731 5014316 -248242267 - Tigger1 DNA MER2_type -689 1729 1 1651 201 3 7 chr2 5014349 5014647 -248241936 - AluJo SINE Alu -15 297 1 565 278 91 13 chr2 5014943 5015173 -248241410 - MLT1D LTR MaLR 0 505 258 307 294 134 21 chr2 5015287 5015481 -248241102 - LTR33 LTR ERVL -1 520 305 808 219 18 0 chr2 5015661 5015825 -248240758 - FRAM SINE Alu -9 167 1 241 295 79 43 chr2 5018061 5018200 -248238383 + L2 LINE L2 3128 3271 -1 317 185 64 25 chr2 5018240 5018397 -248238186 + (TG)n Simple_repeat Simple_repeat 1 163 0 216 47 78 47 chr2 5018407 5018471 -248238112 + (GTGTG)n Simple_repeat Simple_repeat 4 69 0 482 131 48 51 chr2 5018527 5018820 -248237763 + (GTGTG)n Simple_repeat Simple_repeat 1 292 0 437 97 30 67 chr2 5018833 5018998 -248237585 + (GTGTG)n Simple_repeat Simple_repeat 1 159 0 1135 218 44 21 chr2 5019506 5019840 -248236743 - MLT1A1 LTR MaLR -6 359 3 3801 182 14 7 chr2 5019928 5020638 -248235945 - MER72 LTR ERV1 0 722 8 332 133 84 12 chr2 5021558 5021641 -248234942 - L1P LINE L1 -2914 3232 3144 21 36 0 0 chr2 5021775 5021803 -248234780 + AT_rich Low_complexity Low_complexity 1 28 0 435 294 91 67 chr2 5022113 5022691 -248233892 - L1MC4 LINE L1 0 8042 7311 670 217 88 17 chr2 5022713 5023035 -248233548 + MLT1C LTR MaLR 1 373 -94 228 135 19 58 chr2 5023039 5023091 -248233492 + MLT1C LTR MaLR 336 385 -5 2814 131 7 0 chr2 5023096 5023523 -248233060 + MER57B LTR ERV1 5 434 0 234 261 143 62 chr2 5023567 5023728 -248232855 - L1MC4a LINE L1 -470 7338 7165 687 291 82 12 chr2 5023995 5024325 -248232258 - L1MC4 LINE L1 -985 7057 6705 1878 114 0 84 chr2 5024889 5025232 -248231351 - AluSx SINE Alu 0 317 1 748 221 63 0 chr2 5027377 5027535 -248229048 - FAM SINE Alu -7 168 1 357 222 28 46 chr2 5027952 5028060 -248228523 + MIR3 SINE MIR 97 202 -6 284 330 31 10 chr2 5028210 5028307 -248228276 + L2 LINE L2 3188 3286 -27 403 323 64 30 chr2 5028926 5029192 -248227391 - L1MEc LINE L1 -1800 4415 4141 654 304 48 23 chr2 5029316 5029881 -248226702 - L1MEc LINE L1 -2708 3507 2929 631 297 42 0 chr2 5029903 5030068 -248226515 + MER5A DNA MER1_type 4 175 -14 276 340 55 12 chr2 5030169 5030422 -248226161 - L1MEc LINE L1 -3427 2788 2525 2872 229 74 6 chr2 5030452 5031517 -248225066 - L1MB8 LINE L1 -14 6164 5027 31 0 0 0 chr2 5031520 5031551 -248225032 + AT_rich Low_complexity Low_complexity 1 31 0 297 308 117 10 chr2 5031581 5032068 -248224515 - L1MB8 LINE L1 -3486 2660 2122 517 269 39 6 chr2 5032122 5032278 -248224305 - L1MEc LINE L1 -4670 1726 1566 30 77 0 0 chr2 5033687 5033752 -248222831 + AT_rich Low_complexity Low_complexity 1 65 0 355 258 106 26 chr2 5034112 5034263 -248222320 - L1MEc LINE L1 -4913 1292 1130 2684 98 8 11 chr2 5034275 5034651 -248221932 - THE1C LTR MaLR 0 375 1 6831 113 39 137 chr2 5034678 5035540 -248221043 - THE1C-int LTR MaLR -303 1277 607 412 126 0 105 chr2 5035540 5035635 -248220948 - L1PA10 LINE L1 0 6168 6084 6831 113 39 137 chr2 5035635 5036188 -248220395 - THE1C-int LTR MaLR -973 607 1 2390 133 30 11 chr2 5036188 5036556 -248220027 - THE1C LTR MaLR 0 375 1 385 274 73 66 chr2 5036797 5037056 -248219527 - L1MEc LINE L1 -5278 927 667 2421 178 24 2 chr2 5037210 5037627 -248218956 + MSTB LTR MaLR 1 426 0 1226 225 107 24 chr2 5038405 5038743 -248217840 + MLT1B LTR MaLR 1 366 -24 1106 226 13 57 chr2 5038751 5039052 -248217531 + MLT1A2 LTR MaLR 74 361 -13 2327 110 0 0 chr2 5039323 5039633 -248216950 - AluSx SINE Alu -2 310 1 606 315 36 9 chr2 5039826 5040045 -248216538 - MIR SINE MIR -32 230 6 276 77 0 0 chr2 5041244 5041283 -248215300 + (TTTTC)n Simple_repeat Simple_repeat 2 40 0 215 329 89 13 chr2 5043034 5043113 -248213470 + MIR SINE MIR 25 109 -153 272 309 9 27 chr2 5044410 5044520 -248212063 - MLT1F LTR MaLR -82 460 353 521 252 65 0 chr2 5044603 5044742 -248211841 + MSTD LTR MaLR 1 148 -217 668 178 17 0 chr2 5044773 5044891 -248211692 + MSTD LTR MaLR 265 384 -12 429 320 35 58 chr2 5044970 5045229 -248211354 + MIR SINE MIR 10 262 0 200 294 11 43 chr2 5046164 5046348 -248210235 + (CATG)n Simple_repeat Simple_repeat 1 178 0 188 229 42 0 chr2 5048458 5048506 -248208077 - MIR3 SINE MIR -39 169 120 198 103 0 0 chr2 5048921 5048950 -248207633 + (TC)n Simple_repeat Simple_repeat 2 30 0 315 0 0 0 chr2 5049003 5049038 -248207545 + (CA)n Simple_repeat Simple_repeat 2 36 0 1924 186 38 22 chr2 5049807 5050254 -248206329 - L1MA8 LINE L1 -6 6285 5832 2183 157 10 15 chr2 5050254 5050643 -248205940 + L1MA8 LINE L1 5450 5836 -476 1670 146 143 32 chr2 5050726 5051069 -248205514 + MSTA LTR MaLR 19 399 -29 288 0 0 0 chr2 5051069 5051101 -248205482 + (TTA)n Simple_repeat Simple_repeat 2 33 0 5279 91 5 11 chr2 5051101 5051852 -248204731 - L1PA8 LINE L1 -11 6161 5415 525 77 0 0 chr2 5052330 5052395 -248204188 - MER30B DNA MER1_type -125 65 1 342 0 0 0 chr2 5052575 5052613 -248203970 + (TA)n Simple_repeat Simple_repeat 2 39 0 182 292 0 0 chr2 5054653 5054701 -248201882 + L2 LINE L2 3210 3257 -15 1831 214 82 52 chr2 5055380 5055488 -248201095 - L1ME1 LINE L1 -237 5998 5895 1951 125 3 30 chr2 5055488 5055784 -248200799 - AluSx SINE Alu -7 305 18 1831 214 82 52 chr2 5055784 5056238 -248200345 - L1ME1 LINE L1 -340 5895 5456 1925 148 0 0 chr2 5056238 5056544 -248200039 - AluSx SINE Alu 0 306 1 1831 214 82 52 chr2 5056544 5056924 -248199659 - L1ME1 LINE L1 -779 5456 5012 1151 279 38 18 chr2 5056920 5057468 -248199115 - L1ME1 LINE L1 -1647 4568 4010 * 274 269 19 28 chr2 5057842 5057950 -248198633 - L1M4 LINE L1 -969 5177 5071 2831 274 66 37 chr2 5058211 5059995 -248196588 - L1ME1 LINE L1 -2309 3906 2063 315 49 0 0 chr2 5059995 5060036 -248196547 + (TG)n Simple_repeat Simple_repeat 2 42 0 2831 274 66 37 chr2 5060036 5061154 -248195429 - L1ME1 LINE L1 -4152 2063 979 358 324 41 82 chr2 5061176 5061617 -248194966 - L1ME1 LINE L1 -5453 943 521 184 185 37 0 chr2 5063234 5063288 -248193295 + (CATATA)n Simple_repeat Simple_repeat 3 58 0 2239 108 3 0 chr2 5063627 5063924 -248192659 + AluSx SINE Alu 1 298 -14 465 342 129 32 chr2 5064225 5065055 -248191528 - L2 LINE L2 -653 2661 1752 286 278 35 28 chr2 5065183 5065327 -248191256 + L1MB8 LINE L1 93 237 -6622 305 301 65 75 chr2 5065814 5066000 -248190583 + L1MB8 LINE L1 1253 1436 -5511 1603 161 68 37 chr2 5066065 5066389 -248190194 + MER1B DNA MER1_type 4 337 0 1500 288 87 23 chr2 5066412 5067172 -248189411 + L1MB8 LINE L1 1380 2209 -4750 1805 167 7 10 chr2 5067172 5067472 -248189111 + AluJo SINE Alu 1 299 -13 1500 288 87 23 chr2 5067472 5067616 -248188967 + L1MB8 LINE L1 2209 2342 -4617 192 125 0 0 chr2 5067739 5067771 -248188812 + (CA)n Simple_repeat Simple_repeat 1 32 0 1497 270 80 32 chr2 5067912 5069184 -248187399 + L1MB8 LINE L1 2619 3927 -3030 * 1988 212 75 8 chr2 5069162 5069685 -248186898 + L1MB8 LINE L1 6197 6754 -235 1791 137 0 50 chr2 5069751 5070079 -248186504 - AluSq SINE Alu 0 313 1 2330 99 3 3 chr2 5071743 5072047 -248184536 + AluSp SINE Alu 1 304 -9 226 272 150 27 chr2 5072358 5072505 -248184078 + MIR SINE MIR 73 237 -25 342 247 139 38 chr2 5072789 5072947 -248183636 - MIR SINE MIR -42 220 47 1807 231 73 47 chr2 5072952 5073568 -248183015 + L1MC3 LINE L1 7153 7784 -1 2007 99 21 18 chr2 5073920 5074242 -248182341 + AluSg SINE Alu 1 323 0 857 161 61 11 chr2 5074345 5074525 -248182058 - L1MA8 LINE L1 -100 6191 6003 359 294 73 34 chr2 5075683 5075860 -248180723 - MIR SINE MIR 0 262 79 481 55 27 0 chr2 5075890 5075963 -248180620 + (TAGA)n Simple_repeat Simple_repeat 4 78 0 1268 219 91 17 chr2 5076022 5076373 -248180210 - MLT2C1 LTR ERVL -20 377 1 1653 210 3 0 chr2 5076651 5076942 -248179641 + AluJo SINE Alu 1 292 -20 306 314 0 0 chr2 5076947 5077033 -248179550 - L1MC4 LINE L1 -1343 6699 6614 204 200 0 0 chr2 5077037 5077082 -248179501 + (TA)n Simple_repeat Simple_repeat 1 45 0 1108 192 39 13 chr2 5077109 5077338 -248179245 - MER46A DNA MER2_type -1 235 1 2032 154 3 0 chr2 5077541 5077846 -248178737 + AluSq SINE Alu 1 306 -7 356 250 21 21 chr2 5077847 5077987 -248178596 - L1MC4 LINE L1 -1 8041 7902 248 245 0 0 chr2 5077988 5078041 -248178542 + (CATATA)n Simple_repeat Simple_repeat 5 57 0 239 214 0 0 chr2 5078041 5078097 -248178486 - L1MC4 LINE L1 -1339 6703 6648 472 248 18 69 chr2 5078130 5078362 -248178221 - L1MC4 LINE L1 -100 7708 7585 218 289 0 24 chr2 5080029 5080112 -248176471 + CT-rich Low_complexity Low_complexity 2 82 0 569 362 138 23 chr2 5080144 5080485 -248176098 - L2 LINE L2 -2064 1250 829 1307 137 64 0 chr2 5080485 5080704 -248175879 - L1PA11 LINE L1 -2 6172 5940 569 362 138 23 chr2 5080704 5080876 -248175707 - L2 LINE L2 -2485 829 678 1605 181 6 33 chr2 5081288 5081361 -248175222 - L1MC2 LINE L1 -16 6328 6255 2254 118 37 11 chr2 5081361 5081716 -248174867 + THE1B LTR MaLR 1 364 0 1605 181 6 33 chr2 5081716 5081974 -248174609 - L1MC2 LINE L1 -89 6255 6006 508 286 158 22 chr2 5082156 5082467 -248174116 + LTR16A LTR ERVL 93 445 -5 888 186 0 13 chr2 5082915 5083071 -248173512 - FRAM SINE Alu -17 159 6 300 191 0 44 chr2 5084461 5084597 -248171986 + (TA)n Simple_repeat Simple_repeat 2 131 0 1584 207 13 10 chr2 5086815 5087115 -248169468 + AluJb SINE Alu 1 301 -11 24 0 0 0 chr2 5087432 5087456 -248169127 + AT_rich Low_complexity Low_complexity 1 24 0 1944 152 39 17 chr2 5087483 5087839 -248168744 - THE1B LTR MaLR 0 364 1 1592 127 0 9 chr2 5088630 5088859 -248167724 - AluSg/x SINE Alu -8 302 76 888 258 24 0 chr2 5089351 5089560 -248167023 + MER20 DNA MER1_type 6 219 0 458 227 47 7 chr2 5090104 5090254 -248166329 + Charlie5 DNA MER1_type 2469 2624 0 306 0 0 0 chr2 5090886 5090920 -248165663 + (TAAA)n Simple_repeat Simple_repeat 1 34 0 529 217 83 64 chr2 5090921 5091078 -248165505 + AluJb SINE Alu 136 295 -17 1645 121 22 0 chr2 5095837 5096068 -248160515 - AluSx SINE Alu -14 298 63 246 273 175 13 chr2 5096961 5097115 -248159468 - L1MC2 LINE L1 -2055 5753 5575 337 278 151 50 chr2 5097192 5097630 -248158953 + L1M4 LINE L1 3346 3863 -2283 2144 110 0 23 chr2 5097630 5097938 -248158645 + AluSg SINE Alu 1 301 -9 337 278 151 50 chr2 5097938 5098103 -248158480 + L1M4 LINE L1 3863 4010 -2136 224 209 0 0 chr2 5099956 5099999 -248156584 + GA-rich Low_complexity Low_complexity 1 43 0 2342 206 49 0 chr2 5100036 5100527 -248156056 - MLT2B2 LTR ERVL 0 515 1 180 125 0 0 chr2 5100751 5100783 -248155800 + (A)n Simple_repeat Simple_repeat 1 32 0 334 310 78 49 chr2 5100890 5101174 -248155409 - L1MC4a LINE L1 -1849 5959 5668 202 296 70 0 chr2 5101517 5101588 -248154995 - MIR SINE MIR -165 97 22 23 0 0 0 chr2 5102058 5102081 -248154502 + AT_rich Low_complexity Low_complexity 1 23 0 2385 96 0 0 chr2 5103239 5103541 -248153042 - AluSg SINE Alu -8 302 1 2088 150 0 0 chr2 5104647 5104947 -248151636 - AluSx SINE Alu -11 301 2 195 42 0 0 chr2 5106123 5106147 -248150436 + (T)n Simple_repeat Simple_repeat 1 24 0 336 209 77 44 chr2 5106376 5106467 -248150116 - L2 LINE L2 -20 3252 3159 227 360 12 12 chr2 5106637 5106723 -248149860 + L2 LINE L2 3227 3312 -1 206 327 72 39 chr2 5107012 5107220 -248149363 - L2 LINE L2 -1 3312 3098 488 205 60 30 chr2 5107543 5107709 -248148874 - MER58C DNA MER1_type -16 199 29 209 196 0 22 chr2 5107802 5107848 -248148735 + CT-rich Low_complexity Low_complexity 3 47 0 242 292 35 53 chr2 5108283 5108396 -248148187 + MIR SINE MIR 46 156 -106 4459 228 75 92 chr2 5109025 5111916 -248144667 + L1ME3A LINE L1 2194 5035 -1111 357 251 18 90 chr2 5111932 5112054 -248144529 + L1ME3A LINE L1 5772 5880 -290 1804 187 7 0 chr2 5112054 5112359 -248144224 + AluJb SINE Alu 1 307 -5 357 251 18 90 chr2 5112359 5112403 -248144180 + L1ME3A LINE L1 5880 5926 -244 556 228 122 6 chr2 5113028 5113208 -248143375 + MLT1J LTR MaLR 1 201 -310 244 252 205 39 chr2 5113523 5113650 -248142933 + MLT1J LTR MaLR 356 503 -8 426 307 95 35 chr2 5114276 5114592 -248141991 + LTR16C LTR ERVL 146 480 -11 27 0 0 0 chr2 5114625 5114652 -248141931 + AT_rich Low_complexity Low_complexity 1 27 0 189 309 81 24 chr2 5115004 5115127 -248141456 - MIR SINE MIR -14 248 119 2478 108 8 5 chr2 5115514 5115885 -248140698 - L1PA14 LINE L1 -3 6158 5787 283 315 72 9 chr2 5115898 5116009 -248140574 - MIR SINE MIR -60 148 31 200 208 0 38 chr2 5116177 5116230 -248140353 + CT-rich Low_complexity Low_complexity 4 54 0 221 307 94 45 chr2 5116450 5116694 -248139889 - L2 LINE L2 -354 2960 2705 192 356 87 67 chr2 5117094 5117347 -248139236 + L2 LINE L2 2953 3210 -62 306 294 61 81 chr2 5119043 5119240 -248137343 - MIR3 SINE MIR -9 199 7 28 0 0 0 chr2 5119248 5119276 -248137307 + AT_rich Low_complexity Low_complexity 1 28 0 202 283 0 0 chr2 5119426 5119486 -248137097 + (CATA)n Simple_repeat Simple_repeat 3 62 0 443 339 155 13 chr2 5119529 5119904 -248136679 - L3 LINE CR1 -112 1465 1038 351 0 0 0 chr2 5120008 5120047 -248136536 + (CA)n Simple_repeat Simple_repeat 2 40 0 182 262 107 0 chr2 5120241 5120325 -248136258 - L3 LINE CR1 -858 719 627 29 28 0 0 chr2 5120416 5120452 -248136131 + AT_rich Low_complexity Low_complexity 1 36 0 7904 94 0 0 chr2 5120965 5122058 -248134525 - L1P3 LINE L1 -4788 1673 581 6912 109 7 12 chr2 5122055 5123154 -248133429 + L1P LINE L1 1936 3029 -3117 * 2930 176 4 13 chr2 5123448 5123993 -248132590 - L1PA16 LINE L1 -10 6156 5617 2430 174 70 42 chr2 5124037 5124359 -248132224 - MLT2B3 LTR ERVL -8 546 202 207 0 0 0 chr2 5124359 5124382 -248132201 + (GA)n Simple_repeat Simple_repeat 2 24 0 2430 174 70 42 chr2 5124382 5124589 -248131994 - MLT2B3 LTR ERVL -352 202 2 3663 245 31 27 chr2 5124616 5126347 -248130236 + L1MB7 LINE L1 3997 5754 -430 559 77 26 0 chr2 5126347 5126425 -248130158 + MADE1 DNA Mariner 1 80 0 3663 245 31 27 chr2 5126425 5126758 -248129825 + L1MB7 LINE L1 5754 6084 -100 319 323 90 26 chr2 5127187 5127376 -248129207 + MIR SINE MIR 11 211 -51 419 291 99 6 chr2 5127540 5127722 -248128861 - LTR50 LTR ERVL -126 669 471 466 246 123 45 chr2 5127792 5128036 -248128547 - LTR50 LTR ERVL -532 263 1 1874 159 11 0 chr2 5128275 5128558 -248128025 + AluSx SINE Alu 1 286 -26 3914 157 24 10 chr2 5128807 5129520 -248127063 + MER50 LTR ERV1 1 723 -11 689 297 53 28 chr2 5129625 5130022 -248126561 + LTR16B LTR ERVL 37 443 -21 3384 200 67 4 chr2 5130073 5130849 -248125734 - L1MB8 LINE L1 -6 6172 5348 1403 147 0 32 chr2 5130885 5131103 -248125480 - AluSg/x SINE Alu -16 296 86 273 226 0 0 chr2 5131103 5131156 -248125427 - L1M4b LINE L1 -5898 961 909 471 218 0 10 chr2 5131165 5131266 -248125317 + Tigger2a DNA MER2_type 1 100 -334 2042 234 102 22 chr2 5131266 5131936 -248124647 - MER50 LTR ERV1 0 734 12 2105 149 6 3 chr2 5131940 5132290 -248124293 + Tigger2a DNA MER2_type 94 444 0 757 305 59 25 chr2 5132301 5132708 -248123875 - L1M4b LINE L1 -5968 891 471 444 282 169 23 chr2 5132746 5133012 -248123571 - L1M4b LINE L1 -6480 379 75 243 304 29 0 chr2 5133483 5133552 -248123031 - MIR3 SINE MIR -27 181 111 342 256 277 0 chr2 5133784 5133921 -248122662 + MER5B DNA MER1_type 1 175 -3 269 303 111 0 chr2 5134735 5134834 -248121749 - MIR SINE MIR -61 147 38 236 309 48 40 chr2 5134858 5134984 -248121599 + L2 LINE L2 3144 3270 -2 435 343 48 6 chr2 5135304 5135470 -248121113 + MER5B DNA MER1_type 6 178 0 758 154 155 2 chr2 5137465 5137688 -248118895 + L1MA9 LINE L1 6055 6312 0 2152 102 78 90 chr2 5137781 5138214 -248118369 + MSTA LTR MaLR 1 428 0 333 118 0 0 chr2 5138314 5138325 -248118258 + (TG)n Simple_repeat Simple_repeat 1 62 0 333 118 0 0 chr2 5138325 5138376 -248118207 + (TG)n Simple_repeat Simple_repeat 2 52 0 492 311 53 21 chr2 5139635 5139825 -248116758 - MIR SINE MIR -44 218 23 2576 162 80 53 chr2 5139947 5140534 -248116049 - MER6A DNA MER2_type 0 605 3 636 270 76 8 chr2 5140780 5140988 -248115595 - MIR SINE MIR -49 213 1 21 0 0 0 chr2 5141230 5141251 -248115332 + AT_rich Low_complexity Low_complexity 1 21 0 286 286 29 6 chr2 5142551 5142726 -248113857 + (TA)n Simple_repeat Simple_repeat 2 180 0 207 0 0 0 chr2 5142854 5142877 -248113706 + (A)n Simple_repeat Simple_repeat 1 23 0 2053 121 16 7 chr2 5143143 5143472 -248113111 + AluSx SINE Alu 1 312 0 328 299 142 0 chr2 5143569 5143703 -248112880 - MIR SINE MIR -5 257 105 223 200 17 17 chr2 5143728 5143788 -248112795 + T-rich Low_complexity Low_complexity 1 60 0 29 47 0 0 chr2 5144378 5144421 -248112162 + AT_rich Low_complexity Low_complexity 1 43 0 2593 40 0 0 chr2 5146204 5146501 -248110082 - AluY SINE Alu -14 297 1 351 107 40 0 chr2 5147230 5147305 -248109278 + (CA)n Simple_repeat Simple_repeat 2 79 0 213 39 0 0 chr2 5147805 5147831 -248108752 + (T)n Simple_repeat Simple_repeat 1 26 0 1165 225 40 25 chr2 5147905 5148230 -248108353 - MER93a LTR ERV1 -10 392 63 336 167 0 0 chr2 5148338 5148410 -248108173 + T-rich Low_complexity Low_complexity 1 72 0 241 466 8 0 chr2 5149022 5149140 -248107443 + L2 LINE L2 3141 3259 -13 33 25 0 0 chr2 5149533 5149573 -248107010 + AT_rich Low_complexity Low_complexity 1 40 0 22 0 0 0 chr2 5149773 5149795 -248106788 + AT_rich Low_complexity Low_complexity 1 22 0 22 0 0 0 chr2 5151015 5151037 -248105546 + AT_rich Low_complexity Low_complexity 1 22 0 2542 62 0 0 chr2 5151683 5151992 -248104591 - AluY SINE Alu -2 309 1 197 143 29 0 chr2 5152569 5152604 -248103979 + L2 LINE L2 3216 3251 -21 755 279 101 13 chr2 5152707 5153023 -248103560 - MLT1A1 LTR MaLR -2 363 20 317 248 8 0 chr2 5153272 5153401 -248103182 + (TG)n Simple_repeat Simple_repeat 1 130 0 180 217 0 0 chr2 5153443 5153489 -248103094 + (TG)n Simple_repeat Simple_repeat 1 46 0 25 0 0 0 chr2 5154356 5154381 -248102202 + AT_rich Low_complexity Low_complexity 1 25 0 190 360 73 40 chr2 5154425 5154575 -248102008 + MIR3 SINE MIR 22 176 -32 2729 229 30 30 chr2 5154750 5155587 -248100996 - L1MD1 LINE L1 -2 6240 5404 1187 186 11 30 chr2 5155589 5155853 -248100730 + MLT1B LTR MaLR 3 261 -129 669 108 0 10 chr2 5205855 5205957 -248050626 - AluS SINE Alu -211 101 1 531 271 65 28 chr2 5206029 5206243 -248050340 - MIR SINE MIR -1 261 40 1755 175 14 14 chr2 5206443 5206740 -248049843 - AluJb SINE Alu -15 297 1 1937 166 48 45 chr2 5208659 5209015 -248047568 + LTR18A LTR ERVL 1 357 0 2272 12 0 0 chr2 5209464 5209714 -248046869 + AluYa5 SINE Alu 62 311 0 181 125 42 28 chr2 5209962 5210034 -248046549 + (TA)n Simple_repeat Simple_repeat 2 74 0 229 165 39 10 chr2 5210078 5210181 -248046402 + (TA)n Simple_repeat Simple_repeat 2 107 0 28 0 0 0 chr2 5210256 5210284 -248046299 + AT_rich Low_complexity Low_complexity 1 28 0 253 348 121 9 chr2 5211509 5211637 -248044946 + MIR SINE MIR 13 147 -61 25 0 0 0 chr2 5211988 5212013 -248044570 + AT_rich Low_complexity Low_complexity 1 25 0 471 211 9 0 chr2 5212046 5212155 -248044428 + L1MB1 LINE L1 6050 6159 -9 3542 176 45 32 chr2 5212182 5212877 -248043706 + MER44D DNA MER2_type 2 705 0 565 263 0 0 chr2 5212894 5213046 -248043537 + L1MA10 LINE L1 6181 6332 -2 2052 137 3 10 chr2 5213224 5213523 -248043060 + AluSx SINE Alu 1 297 -15 339 25 0 0 chr2 5213565 5213605 -248042978 + (TG)n Simple_repeat Simple_repeat 2 41 0 286 341 105 44 chr2 5213939 5214588 -248041995 - L2 LINE L2 -261 3052 2362 239 318 25 117 chr2 5214614 5214853 -248041730 - MIR SINE MIR -35 227 11 1658 198 87 15 chr2 5214869 5215515 -248041068 - L1MD1 LINE L1 -303 6333 5592 2043 164 0 0 chr2 5215529 5215840 -248040743 + AluSx SINE Alu 1 311 -1 849 110 0 0 chr2 5215846 5215973 -248040610 + (GAAA)n Simple_repeat Simple_repeat 2 128 0 312 284 0 21 chr2 5215975 5216070 -248040513 - L1MD1 LINE L1 -955 5585 5493 3118 215 46 48 chr2 5216164 5217365 -248039218 - L1MD1 LINE L1 -4195 2345 1147 221 121 0 121 chr2 5217534 5217592 -248038991 + L2 LINE L2 3222 3272 0 541 204 32 51 chr2 5217649 5217806 -248038777 - MER3 DNA MER1_type 0 209 56 3338 75 23 0 chr2 5219651 5220094 -248036489 - MLT2A2 LTR ERVL 0 453 1 37 76 0 0 chr2 5220241 5220320 -248036263 + AT_rich Low_complexity Low_complexity 1 79 0 190 205 26 0 chr2 5220330 5220408 -248036175 + (TA)n Simple_repeat Simple_repeat 2 81 0 34 0 0 0 chr2 5220408 5220442 -248036141 + AT_rich Low_complexity Low_complexity 1 34 0 504 171 29 6 chr2 5220481 5220656 -248035927 + (TA)n Simple_repeat Simple_repeat 1 179 0 187 407 68 6 chr2 5221609 5221771 -248034812 - MIR SINE MIR -32 230 59 2621 198 86 34 chr2 5221935 5222372 -248034211 - L1MB3 LINE L1 -28 6155 5742 2471 68 0 7 chr2 5222372 5222681 -248033902 + AluY SINE Alu 1 307 -4 309 51 0 0 chr2 5222683 5222722 -248033861 + (TA)n Simple_repeat Simple_repeat 1 39 0 2621 198 86 34 chr2 5222722 5222982 -248033601 - L1MB3 LINE L1 -441 5742 5419 409 332 76 43 chr2 5224682 5224920 -248031663 + L2 LINE L2 2447 2675 -638 1753 154 146 16 chr2 5224920 5225296 -248031287 + MSTA LTR MaLR 2 426 -2 409 332 76 43 chr2 5225296 5225698 -248030885 + L2 LINE L2 2675 3313 0 2435 56 10 0 chr2 5226434 5226740 -248029843 - AluY SINE Alu -2 309 1 271 282 0 13 chr2 5227118 5227196 -248029387 - MLT1J2 LTR MaLR -29 421 345 247 353 12 0 chr2 5227582 5227667 -248028916 + MIR3 SINE MIR 92 177 -31 771 247 0 5 chr2 5228064 5228250 -248028333 - MER58A DNA MER1_type -37 187 3 400 82 41 52 chr2 5228395 5228492 -248028091 + CT-rich Low_complexity Low_complexity 5 100 0 998 178 12 0 chr2 5228498 5228667 -248027916 - AluSg/x SINE Alu -9 303 133 1155 176 69 4 chr2 5228667 5228912 -248027671 - L1MA8 LINE L1 -52 6239 5979 639 215 204 18 chr2 5229070 5229480 -248027103 - MLT1F1 LTR MaLR -6 561 60 1750 177 10 7 chr2 5231135 5231440 -248025143 - AluSx SINE Alu -6 306 1 1605 173 78 0 chr2 5231478 5231761 -248024822 + AluSg SINE Alu 1 305 -5 271 244 213 8 chr2 5231869 5231996 -248024587 + L2 LINE L2 3161 3313 0 305 343 70 6 chr2 5235267 5235439 -248021144 - L1MDa LINE L1 -6261 279 97 27 81 0 0 chr2 5235442 5235504 -248021079 + AT_rich Low_complexity Low_complexity 1 62 0 292 205 33 8 chr2 5235543 5235665 -248020918 + (TA)n Simple_repeat Simple_repeat 2 126 0 413 339 44 42 chr2 5235750 5236780 -248019803 - L1MEc LINE L1 -4715 1595 530 2681 117 0 3 chr2 5238200 5238576 -248018007 + THE1C LTR MaLR 1 375 0 210 237 85 0 chr2 5239768 5239827 -248016756 + L2 LINE L2 3200 3263 -50 218 256 268 18 chr2 5240158 5240326 -248016257 + MIR SINE MIR 14 223 -39 242 250 115 13 chr2 5241100 5241256 -248015327 + L1ME4a LINE L1 5791 5962 -159 28 29 0 0 chr2 5242353 5242388 -248014195 + AT_rich Low_complexity Low_complexity 1 35 0 221 331 81 47 chr2 5244830 5245002 -248011581 + MER5A DNA MER1_type 1 178 -11 310 351 48 30 chr2 5245219 5245384 -248011199 - L2 LINE L2 -385 2929 2762 24 0 0 0 chr2 5245581 5245605 -248010978 + AT_rich Low_complexity Low_complexity 1 24 0 203 325 62 100 chr2 5245616 5245776 -248010807 - MIR3 SINE MIR -14 194 41 233 268 101 67 chr2 5248108 5248317 -248008266 - L1ME LINE L1 -254 5867 5652 208 289 0 33 chr2 5248518 5248608 -248007975 + (TA)n Simple_repeat Simple_repeat 1 87 0 1177 106 29 114 chr2 5248900 5248920 -248007663 + MER30 DNA MER1_type 6 26 -204 2788 121 0 0 chr2 5248920 5249284 -248007299 + THE1B LTR MaLR 1 364 0 1177 106 29 114 chr2 5249284 5249345 -248007238 + MER30 DNA MER1_type 26 91 -139 1985 155 0 16 chr2 5249345 5249662 -248006921 + AluSx SINE Alu 1 312 0 1177 106 29 114 chr2 5249662 5249825 -248006758 + MER30 DNA MER1_type 91 230 0 605 238 119 61 chr2 5249847 5250208 -248006375 + Charlie4a DNA MER1_type 23 404 -104 369 43 0 0 chr2 5250210 5250257 -248006326 + (TG)n Simple_repeat Simple_repeat 2 48 0 327 336 57 0 chr2 5252546 5252686 -248003897 + MIR SINE MIR 50 197 -65 208 330 96 0 chr2 5252989 5253104 -248003479 + L2 LINE L2 3188 3313 0 3591 178 60 33 chr2 5253218 5253982 -248002601 - LTR1 LTR ERV1 0 785 1 1598 225 76 57 chr2 5254207 5254728 -248001855 - MLT2B3 LTR ERVL -33 506 1 331 239 0 80 chr2 5255264 5255352 -248001231 - L2 LINE L2 -9 3304 3224 29 60 0 0 chr2 5256522 5256572 -248000011 + AT_rich Low_complexity Low_complexity 1 50 0 1002 215 27 32 chr2 5257449 5257668 -247998915 - MER20 DNA MER1_type -1 218 1 261 268 98 41 chr2 5257925 5258048 -247998535 + L2 LINE L2 3137 3266 -6 184 288 89 85 chr2 5259294 5259530 -247997053 + L2 LINE L2 3077 3313 0 2091 130 0 16 chr2 5260128 5260444 -247996139 + AluSx SINE Alu 1 311 -1 26 0 0 0 chr2 5261022 5261048 -247995535 + AT_rich Low_complexity Low_complexity 1 26 0 1187 193 121 43 chr2 5261128 5261462 -247995121 - MLT1A1 LTR MaLR -7 421 1 26 0 0 0 chr2 5261624 5261650 -247994933 + AT_rich Low_complexity Low_complexity 1 26 0 755 194 0 15 chr2 5261662 5261796 -247994787 - FLAM_C SINE Alu -7 136 5 1032 247 18 0 chr2 5262076 5262303 -247994280 - MLT1F1 LTR MaLR -7 560 330 252 212 47 35 chr2 5262423 5262508 -247994075 - MLT1F1 LTR MaLR -481 86 1 2240 91 14 0 chr2 5263142 5263438 -247993145 + AluSp SINE Alu 1 300 -13 387 298 13 33 chr2 5263573 5263724 -247992859 + GA-rich Low_complexity Low_complexity 1 148 0 23 33 0 0 chr2 5265294 5265324 -247991259 + AT_rich Low_complexity Low_complexity 1 30 0 28 29 0 0 chr2 5265348 5265383 -247991200 + AT_rich Low_complexity Low_complexity 1 35 0 21 82 0 0 chr2 5265440 5265489 -247991094 + AT_rich Low_complexity Low_complexity 1 49 0 4060 232 113 40 chr2 5265786 5267070 -247989513 + Charlie1a DNA MER1_type 19 1396 -59 263 308 88 13 chr2 5267084 5267243 -247989340 - L2 LINE L2 -2009 1305 1135 2099 119 0 44 chr2 5268136 5268456 -247988127 - AluSx SINE Alu -6 306 1 21 36 0 0 chr2 5268728 5268756 -247987827 + AT_rich Low_complexity Low_complexity 1 28 0 333 82 0 0 chr2 5269465 5269514 -247987069 + (CA)n Simple_repeat Simple_repeat 2 50 0 216 268 42 38 chr2 5271204 5271289 -247985294 - MIR SINE MIR -68 140 53 2732 32 0 0 chr2 5271597 5271907 -247984676 - AluY SINE Alu 0 311 2 208 164 0 36 chr2 5273494 5273549 -247983034 + CT-rich Low_complexity Low_complexity 4 56 0 310 160 13 13 chr2 5273605 5273680 -247982903 + CT-rich Low_complexity Low_complexity 4 78 0 201 313 9 18 chr2 5273991 5274103 -247982480 + GA-rich Low_complexity Low_complexity 4 114 0 199 195 18 43 chr2 5274522 5274686 -247981897 + (TATAA)n Simple_repeat Simple_repeat 3 162 0 395 348 111 14 chr2 5275239 5275518 -247981065 - L3 LINE CR1 -25 1552 1247 793 164 0 0 chr2 5275519 5275635 -247980948 + FLAM_C SINE Alu 3 118 -15 452 126 11 0 chr2 5275944 5276031 -247980552 + (CA)n Simple_repeat Simple_repeat 1 88 0 249 326 41 10 chr2 5276378 5276476 -247980107 + MIR3 SINE MIR 62 162 -46 186 43 0 0 chr2 5277595 5277618 -247978965 + (GA)n Simple_repeat Simple_repeat 2 24 0 223 225 0 56 chr2 5280086 5280157 -247976426 + (TG)n Simple_repeat Simple_repeat 2 68 0 2483 74 3 10 chr2 5280328 5280637 -247975946 + AluSp SINE Alu 1 307 -6 217 259 46 46 chr2 5281420 5281528 -247975055 + MIR SINE MIR 112 219 -43 6469 96 15 14 chr2 5283154 5284520 -247972063 + L1PA12 LINE L1 4795 6168 0 1928 149 3 3 chr2 5284933 5285228 -247971355 + AluJo SINE Alu 1 295 -17 1942 91 88 0 chr2 5285379 5285653 -247970930 + AluSp SINE Alu 2 299 -14 947 253 83 41 chr2 5285713 5286006 -247970577 - MLT1E2 LTR MaLR -87 539 225 2339 163 49 5 chr2 5286006 5286416 -247970167 + MSTA LTR MaLR 1 428 0 947 253 83 41 chr2 5286416 5286509 -247970074 - MLT1E2 LTR MaLR -401 225 137 316 270 45 27 chr2 5287123 5287234 -247969349 + HAL1b LINE L1 621 733 -615 259 231 88 27 chr2 5287854 5288001 -247968582 + L1MDa LINE L1 2468 2623 -3917 2755 23 0 0 chr2 5288263 5288573 -247968010 + AluYa5 SINE Alu 1 310 -1 415 304 53 6 chr2 5289227 5289398 -247967185 - MIR SINE MIR -72 190 12 1026 262 75 75 chr2 5289401 5290290 -247966293 + MER45C DNA AcHobo 1 943 -10 390 305 0 0 chr2 5290379 5290484 -247966099 - L3 LINE CR1 -272 1305 1201 2295 118 0 0 chr2 5290725 5291038 -247965545 + AluSq SINE Alu 1 313 0 237 278 0 0 chr2 5292813 5292903 -247963680 + (TA)n Simple_repeat Simple_repeat 1 90 0 218 402 0 0 chr2 5292988 5293080 -247963503 - MIR3 SINE MIR -16 192 101 223 346 122 19 chr2 5293893 5294049 -247962534 - MIR SINE MIR -71 191 20 261 83 0 0 chr2 5294158 5294194 -247962389 + (T)n Simple_repeat Simple_repeat 1 36 0 234 62 0 0 chr2 5294678 5294710 -247961873 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 25 75 0 0 chr2 5294889 5294942 -247961641 + AT_rich Low_complexity Low_complexity 1 53 0 506 277 63 51 chr2 5294957 5295210 -247961373 + L2 LINE L2 3056 3311 -2 267 79 0 0 chr2 5295688 5295726 -247960857 + (TG)n Simple_repeat Simple_repeat 2 39 0 824 244 60 69 chr2 5297349 5297672 -247958911 - L2 LINE L2 -359 2913 2581 317 363 65 0 chr2 5298198 5298322 -247958261 - L2 LINE L2 0 3272 3141 1471 80 99 0 chr2 5299219 5299431 -247957152 + L1PA7 LINE L1 5917 6149 -5 417 198 12 0 chr2 5300054 5300135 -247956448 - LTR16A1 LTR ERVL -2 455 374 278 311 83 0 chr2 5300320 5300500 -247956083 - LTR16A1 LTR ERVL -116 341 147 524 234 42 42 chr2 5301258 5301450 -247955133 + MLT1J1 LTR MaLR 18 209 -237 248 266 16 40 chr2 5301560 5301684 -247954899 - LTR33 LTR ERVL -2 519 399 687 320 32 41 chr2 5302159 5302500 -247954083 - L3 LINE CR1 -175 1402 1065 724 244 37 5 chr2 5302638 5302855 -247953728 - MER58A DNA MER1_type 0 224 1 411 212 18 44 chr2 5302866 5302979 -247953604 + MER5B DNA MER1_type 4 113 -65 861 234 70 8 chr2 5302982 5303089 -247953494 - L1MDa LINE L1 -6239 301 202 1699 171 23 10 chr2 5303089 5303394 -247953189 + AluJo SINE Alu 1 309 -3 861 234 70 8 chr2 5303394 5303542 -247953041 - L1MDa LINE L1 -6338 202 30 592 218 67 22 chr2 5303905 5304084 -247952499 + MER5A DNA MER1_type 3 189 0 487 301 0 28 chr2 5304136 5304279 -247952304 - MER5B DNA MER1_type -3 175 37 290 181 0 14 chr2 5304417 5304489 -247952094 + (TA)n Simple_repeat Simple_repeat 2 72 0 350 281 0 0 chr2 5304496 5304585 -247951998 - L1MC4 LINE L1 -1339 6703 6615 1791 198 147 2 chr2 5304596 5305011 -247951572 - MLT2B2 LTR ERVL -40 475 1 1298 79 0 6 chr2 5305473 5305651 -247950932 + L1PA5 LINE L1 5978 6154 0 259 329 61 13 chr2 5306111 5306342 -247950241 - HAL1 LINE L1 -2063 444 203 436 68 27 14 chr2 5306619 5306692 -247949891 + (GAAAA)n Simple_repeat Simple_repeat 2 75 0 282 73 0 0 chr2 5306918 5306959 -247949624 + (A)n Simple_repeat Simple_repeat 1 41 0 34 42 0 0 chr2 5307654 5307702 -247948881 + AT_rich Low_complexity Low_complexity 1 48 0 411 282 15 0 chr2 5308524 5308655 -247947928 + MER94 DNA DNA 1 133 -1 2072 137 5 67 chr2 5308766 5309153 -247947430 - THE1B LTR MaLR 0 364 2 409 98 49 16 chr2 5309503 5309626 -247946957 + (TA)n Simple_repeat Simple_repeat 2 128 0 657 64 70 18 chr2 5309640 5309811 -247946772 + (TA)n Simple_repeat Simple_repeat 1 180 0 2688 20 0 0 chr2 5311626 5311928 -247944655 - AluY SINE Alu -9 302 1 24 32 0 0 chr2 5313171 5313202 -247943381 + AT_rich Low_complexity Low_complexity 1 31 0 23 0 0 0 chr2 5313729 5313752 -247942831 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr2 5317081 5317102 -247939481 + AT_rich Low_complexity Low_complexity 1 21 0 498 221 66 12 chr2 5317838 5318004 -247938579 + MER39 LTR ERV1 1 170 -372 453 206 39 58 chr2 5317985 5318140 -247938443 + MER39 LTR ERV1 357 508 -199 * 2411 72 0 0 chr2 5318183 5318475 -247938108 - AluY SINE Alu -19 292 1 306 194 0 97 chr2 5318504 5318597 -247937986 - AluJ/FLAM SINE Alu -217 85 2 1525 178 6 54 chr2 5318621 5318936 -247937647 - AluJo SINE Alu -12 300 1 257 397 7 14 chr2 5319446 5319592 -247936991 - L3 LINE CR1 -4 1573 1429 2242 188 60 34 chr2 5319595 5320131 -247936452 - MLT2B3 LTR ERVL -1 553 4 1779 159 48 7 chr2 5320146 5320436 -247936147 + AluJb SINE Alu 1 302 -10 5274 188 34 54 chr2 5320437 5321748 -247934835 - ERVL-B3 LTR ERVL -8 5756 4473 2288 170 5 2 chr2 5321724 5322125 -247934458 + ERVL LTR ERVL 4077 4478 -1286 * 1922 250 78 18 chr2 5322125 5322846 -247933737 - MLT-int LTR MaLR -59 1676 864 1381 190 23 50 chr2 5322851 5323193 -247933390 - MSTD LTR MaLR -63 333 1 266 342 102 16 chr2 5323220 5323407 -247933176 - L3 LINE CR1 -208 1369 1167 277 317 58 0 chr2 5324267 5324371 -247932212 + L2 LINE L2 3203 3312 -1 291 54 0 0 chr2 5324455 5324492 -247932091 + (TG)n Simple_repeat Simple_repeat 2 38 0 215 289 64 64 chr2 5326145 5326318 -247930265 - MIR SINE MIR 0 262 90 2297 98 0 10 chr2 5326344 5326651 -247929932 + AluSc SINE Alu 1 304 -5 1797 155 67 28 chr2 5327704 5328065 -247928518 + THE1C LTR MaLR 1 375 0 321 355 61 20 chr2 5328499 5328696 -247927887 + L1MC/D LINE L1 5540 5744 -2064 2642 42 0 0 chr2 5329462 5329773 -247926810 - AluY SINE Alu 0 311 1 521 184 64 0 chr2 5329779 5329888 -247926695 - MLT1A1 LTR MaLR -249 116 1 235 283 17 0 chr2 5330287 5330347 -247926236 - MIR SINE MIR -112 96 36 2496 67 0 0 chr2 5330531 5330830 -247925753 + AluY SINE Alu 1 299 -12 1831 156 54 0 chr2 5330862 5331196 -247925387 - THE1C LTR MaLR 0 375 24 2487 67 0 0 chr2 5331688 5331986 -247924597 + AluY SINE Alu 1 298 -13 2032 150 50 6 chr2 5332018 5332377 -247924206 - THE1C LTR MaLR 0 375 1 2671 38 0 6 chr2 5332667 5332980 -247923603 + AluY SINE Alu 1 311 0 394 298 88 23 chr2 5334178 5334349 -247922234 - L1ME3A LINE L1 -24 6146 5965 548 297 176 11 chr2 5334414 5334976 -247921607 - L1ME3A LINE L1 -211 5951 5297 554 272 92 87 chr2 5335186 5335277 -247921306 - L1ME3A LINE L1 -1310 4836 4747 2222 129 0 0 chr2 5335277 5335587 -247920996 - AluSg SINE Alu 0 310 1 554 272 92 87 chr2 5335587 5337649 -247918934 - L1ME3A LINE L1 -1399 4747 2674 334 223 16 8 chr2 5337665 5337786 -247918797 + CT-rich Low_complexity Low_complexity 3 124 0 494 274 72 33 chr2 5337811 5338201 -247918382 - L1ME3A LINE L1 -3528 2618 2214 348 211 0 0 chr2 5338904 5338980 -247917603 + (TA)n Simple_repeat Simple_repeat 1 76 0 239 79 26 0 chr2 5338979 5339017 -247917566 + (GA)n Simple_repeat Simple_repeat 2 40 0 * 1680 184 0 7 chr2 5339017 5339295 -247917288 - AluSx SINE Alu -30 282 7 28 79 0 0 chr2 5340171 5340234 -247916349 + AT_rich Low_complexity Low_complexity 1 63 0 225 0 0 0 chr2 5340438 5340463 -247916120 + (TG)n Simple_repeat Simple_repeat 1 25 0 1292 180 6 0 chr2 5341858 5342129 -247914454 - MER33 DNA MER1_type -58 266 1 536 282 44 44 chr2 5342707 5342913 -247913670 + MIR SINE MIR 41 246 -16 201 94 0 0 chr2 5342920 5342952 -247913631 + (TAG)n Simple_repeat Simple_repeat 1 32 0 228 143 0 0 chr2 5343948 5343990 -247912593 + (TC)n Simple_repeat Simple_repeat 2 43 0 2429 79 0 0 chr2 5344503 5344806 -247911777 + AluY SINE Alu 1 303 -8 252 169 102 0 chr2 5344983 5345042 -247911541 + MIR SINE MIR 87 151 -111 339 311 101 29 chr2 5345748 5345986 -247910597 + MIR SINE MIR 3 257 -5 554 352 67 15 chr2 5346547 5346950 -247909633 - L2 LINE L2 -444 2870 2447 2403 82 0 13 chr2 5348345 5348660 -247907923 - AluY SINE Alu 0 311 1 261 250 24 12 chr2 5349554 5349638 -247906945 + (TAGA)n Simple_repeat Simple_repeat 4 88 0 843 130 15 21 chr2 5350671 5351008 -247905575 + (TG)n Simple_repeat Simple_repeat 1 334 0 1463 105 0 0 chr2 5351501 5351691 -247904892 + AluSg/x SINE Alu 110 299 -13 412 181 11 53 chr2 5355122 5355216 -247901367 + MLT1J2 LTR MaLR 361 450 0 316 260 27 0 chr2 5355292 5355442 -247901141 + (TA)n Simple_repeat Simple_repeat 2 155 0 300 237 26 0 chr2 5355547 5355720 -247900863 + (TA)n Simple_repeat Simple_repeat 1 177 0 202 429 18 39 chr2 5356248 5356343 -247900240 - L2 LINE L2 -70 3202 3106 1996 195 0 11 chr2 5356343 5356712 -247899871 - MLT1A1 LTR MaLR 0 365 1 202 429 18 39 chr2 5356712 5356896 -247899687 - L2 LINE L2 -166 3106 2929 228 35 0 0 chr2 5357793 5357822 -247898761 + (CA)n Simple_repeat Simple_repeat 2 30 0 496 304 81 20 chr2 5360377 5360692 -247895891 + L1ME LINE L1 5486 5820 -301 229 283 0 0 chr2 5360889 5360942 -247895641 + (CATA)n Simple_repeat Simple_repeat 2 54 0 351 306 99 84 chr2 5361286 5361675 -247894908 + L1ME4a LINE L1 5304 5686 -435 180 77 0 0 chr2 5361675 5361701 -247894882 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1658 180 3 28 chr2 5361704 5361993 -247894590 - AluJo SINE Alu -30 282 1 351 306 99 84 chr2 5361993 5362073 -247894510 + L1ME4a LINE L1 5687 5786 -335 332 276 163 23 chr2 5362111 5362332 -247894251 - MLT1J2 LTR MaLR -3 447 196 355 220 30 30 chr2 5363625 5363725 -247892858 + L1ME4a LINE L1 5955 6054 -67 2128 107 3 3 chr2 5364073 5364362 -247892221 + AluSx SINE Alu 3 291 -21 721 216 42 6 chr2 5364390 5364557 -247892026 + MSTD LTR MaLR 223 395 -1 384 252 172 7 chr2 5365666 5365817 -247890766 + MER117 DNA MER1_type 21 196 -1 2058 137 0 19 chr2 5366057 5366371 -247890212 - AluSx SINE Alu -4 308 1 634 339 29 4 chr2 5367348 5367622 -247888961 - L2 LINE L2 -1318 1996 1716 947 176 0 13 chr2 5369893 5370052 -247886531 + FRAM SINE Alu 1 157 -9 22 80 0 0 chr2 5372293 5372343 -247884240 + AT_rich Low_complexity Low_complexity 1 50 0 22 0 0 0 chr2 5372372 5372394 -247884189 + AT_rich Low_complexity Low_complexity 1 22 0 1088 262 28 6 chr2 5372522 5372839 -247883744 - MER33 DNA MER1_type 0 324 1 325 299 60 22 chr2 5374671 5374805 -247881778 - MIR3 SINE MIR -59 149 11 231 347 51 10 chr2 5374932 5375078 -247881505 - MER5A DNA MER1_type -5 173 24 250 258 0 16 chr2 5375765 5375827 -247880756 - MLT1L LTR MaLR -111 504 444 430 302 58 0 chr2 5375827 5375966 -247880617 + MERVL LTR ERVL 4166 4312 -1173 1384 174 16 172 chr2 5376035 5376478 -247880105 + MLT1A2 LTR MaLR 1 374 0 256 140 0 0 chr2 5376886 5376936 -247879647 + L1MC4 LINE L1 6656 6705 -1337 257 109 22 0 chr2 5376936 5376982 -247879601 + (TA)n Simple_repeat Simple_repeat 1 47 0 2108 128 3 3 chr2 5377184 5377481 -247879102 + AluSx SINE Alu 9 305 -7 292 208 20 40 chr2 5378047 5378148 -247878435 + (TATG)n Simple_repeat Simple_repeat 2 100 0 185 156 0 22 chr2 5378163 5378208 -247878375 + (TG)n Simple_repeat Simple_repeat 1 44 0 210 71 0 0 chr2 5378379 5378407 -247878176 + (GAAA)n Simple_repeat Simple_repeat 2 29 0 363 283 79 12 chr2 5379280 5379452 -247877131 + MIR SINE MIR 31 209 -53 185 308 66 22 chr2 5379593 5379684 -247876899 + MIR SINE MIR 70 164 -98 283 226 39 77 chr2 5380724 5380991 -247875592 + (CCCA)n Simple_repeat Simple_repeat 1 256 0 262 203 0 31 chr2 5381550 5381614 -247874969 + G-rich Low_complexity Low_complexity 4 65 0 27 0 0 0 chr2 5381704 5381731 -247874852 + AT_rich Low_complexity Low_complexity 1 27 0 683 224 12 12 chr2 5381888 5382022 -247874561 - MER5A DNA MER1_type -8 181 45 1594 222 101 9 chr2 5382022 5382450 -247874133 + MLT1C LTR MaLR 1 467 0 683 224 12 12 chr2 5382450 5382485 -247874098 - MER5A DNA MER1_type -143 46 12 1633 160 63 3 chr2 5382608 5382895 -247873688 + MER50 LTR ERV1 3 306 -428 1279 189 44 36 chr2 5382897 5383027 -247873556 + MER50 LTR ERV1 434 562 -172 2059 125 20 17 chr2 5383027 5383324 -247873259 - AluSx SINE Alu -12 300 3 1279 189 44 36 chr2 5383324 5383468 -247873115 + MER50 LTR ERV1 562 710 -24 227 287 0 69 chr2 5383881 5383968 -247872615 - MIR SINE MIR -109 99 19 2405 84 0 7 chr2 5384180 5384489 -247872094 + AluY SINE Alu 1 307 -4 219 204 20 0 chr2 5386498 5386547 -247870036 + (TA)n Simple_repeat Simple_repeat 2 51 0 309 183 54 0 chr2 5386618 5386711 -247869872 + (TA)n Simple_repeat Simple_repeat 2 99 0 197 236 36 36 chr2 5386872 5386927 -247869656 + MIR3 SINE MIR 126 180 -28 324 216 24 32 chr2 5388569 5388694 -247867889 + (TAGA)n Simple_repeat Simple_repeat 3 126 0 222 37 0 0 chr2 5389609 5389636 -247866947 + (TG)n Simple_repeat Simple_repeat 2 28 0 2439 80 3 3 chr2 5389872 5390183 -247866400 + AluY SINE Alu 1 311 0 193 215 89 51 chr2 5390290 5390369 -247866214 + MIR3 SINE MIR 106 187 -21 807 290 140 6 chr2 5390743 5391108 -247865475 + MLT1G1 LTR MaLR 86 499 -96 201 213 0 21 chr2 5391385 5391432 -247865151 + L2 LINE L2 3267 3312 -1 285 94 31 16 chr2 5392424 5392488 -247864095 + (TA)n Simple_repeat Simple_repeat 2 66 0 461 142 239 44 chr2 5392595 5392708 -247863875 + MLT1C LTR MaLR 2 136 -331 8950 182 35 9 chr2 5392709 5394115 -247862468 + L1MA3 LINE L1 21 1390 -6246 612 0 0 0 chr2 5394115 5394183 -247862400 + (GA)n Simple_repeat Simple_repeat 2 69 0 8950 182 35 9 chr2 5394183 5395595 -247860988 + L1MA3 LINE L1 1390 6893 -743 1096 203 8 38 chr2 5395598 5395864 -247860719 - AluJo SINE Alu -23 289 32 4628 119 80 10 chr2 5395864 5396640 -247859943 + L1MA3 LINE L1 6885 7714 -10 2256 99 0 7 chr2 5396672 5396976 -247859607 + AluSg1 SINE Alu 5 306 -3 1098 238 44 24 chr2 5396992 5397332 -247859251 + MLT1C LTR MaLR 121 467 0 348 320 26 48 chr2 5397354 5397585 -247858998 + MIR SINE MIR 13 238 -24 22 56 0 0 chr2 5398597 5398633 -247857950 + AT_rich Low_complexity Low_complexity 1 36 0 208 69 0 0 chr2 5400258 5400287 -247856296 - MIR SINE MIR -66 142 114 186 133 0 0 chr2 5401375 5401405 -247855178 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 21 36 0 0 chr2 5402269 5402297 -247854286 + AT_rich Low_complexity Low_complexity 1 28 0 2106 128 6 13 chr2 5402612 5402924 -247853659 - AluSg SINE Alu 0 310 1 464 264 22 55 chr2 5403286 5403468 -247853115 + MER69A DNA AcHobo 1 176 -1 25 0 0 0 chr2 5403669 5403694 -247852889 + AT_rich Low_complexity Low_complexity 1 25 0 2178 115 0 0 chr2 5404294 5404581 -247852002 - AluSg SINE Alu -23 287 1 1049 72 0 0 chr2 5404917 5405055 -247851528 + MLT2B1 LTR ERVL 1 138 -382 965 199 0 5 chr2 5405068 5405254 -247851329 + MLT2B2 LTR ERVL 329 513 -2 250 252 244 0 chr2 5406111 5406238 -247850345 + MIR SINE MIR 99 256 -6 243 271 14 14 chr2 5406285 5406355 -247850228 - MER5A DNA MER1_type -5 184 115 226 234 0 0 chr2 5406806 5406853 -247849730 + GA-rich Low_complexity Low_complexity 3 49 0 2700 107 0 3 chr2 5407604 5407969 -247848614 + THE1B LTR MaLR 1 364 0 4033 139 26 2 chr2 5408233 5408851 -247847732 + MER41B LTR ERV1 1 633 -2 237 268 223 27 chr2 5409370 5409482 -247847101 + MER34 LTR ERV1 8 141 -401 237 220 121 44 chr2 5409470 5409561 -247847022 + MER34 LTR ERV1 76 173 -369 * 976 211 80 35 chr2 5409550 5409851 -247846732 + MER39 LTR ERV1 391 565 0 26 0 0 0 chr2 5410452 5410478 -247846105 + AT_rich Low_complexity Low_complexity 1 26 0 414 85 0 0 chr2 5411377 5411436 -247845147 + (GGA)n Simple_repeat Simple_repeat 2 60 0 223 221 48 10 chr2 5411854 5411958 -247844625 + (TA)n Simple_repeat Simple_repeat 1 108 0 28 29 0 0 chr2 5414768 5414803 -247841780 + AT_rich Low_complexity Low_complexity 1 35 0 1772 132 0 137 chr2 5414979 5415344 -247841239 + MER1B DNA MER1_type 25 339 0 260 228 55 41 chr2 5415378 5415523 -247841060 + (ATGTG)n Simple_repeat Simple_repeat 2 148 0 208 208 6 82 chr2 5415558 5415741 -247840842 + (TG)n Simple_repeat Simple_repeat 1 169 0 * 321 208 77 30 chr2 5415640 5415808 -247840775 + (TAGTG)n Simple_repeat Simple_repeat 5 180 0 307 238 71 18 chr2 5415834 5416002 -247840581 + (TAGTG)n Simple_repeat Simple_repeat 2 178 0 2314 103 3 0 chr2 5418294 5418594 -247837989 - AluSp SINE Alu -12 301 1 346 238 266 21 chr2 5418820 5418963 -247837620 - MLT1J LTR MaLR -333 178 1 4620 306 76 33 chr2 5419891 5420367 -247836216 - L2 LINE L2 -623 2691 2237 2145 106 7 0 chr2 5420367 5420649 -247835934 - AluSc SINE Alu -25 284 1 4620 306 76 33 chr2 5420649 5421606 -247834977 - L2 LINE L2 -1077 2237 1323 1427 205 13 30 chr2 5421606 5421904 -247834679 - AluJb SINE Alu -19 293 1 4620 306 76 33 chr2 5421904 5422888 -247833695 - L2 LINE L2 -1991 1323 159 2298 114 0 0 chr2 5422888 5423187 -247833396 - AluSg SINE Alu -11 299 1 4620 306 76 33 chr2 5423187 5423261 -247833322 - L2 LINE L2 -3155 159 90 33 0 0 0 chr2 5423374 5423407 -247833176 + AT_rich Low_complexity Low_complexity 1 33 0 2506 74 0 3 chr2 5423407 5423719 -247832864 - AluY SINE Alu 0 311 1 2283 124 0 3 chr2 5423985 5424299 -247832284 + AluSq SINE Alu 1 313 0 411 347 55 24 chr2 5424302 5424682 -247831901 + L1M4 LINE L1 3115 3499 -2647 520 308 242 8 chr2 5424726 5425003 -247831580 - L2 LINE L2 -561 2753 2542 2090 191 46 20 chr2 5425003 5425458 -247831125 - MLT1C LTR MaLR 0 467 1 520 308 242 8 chr2 5425458 5425700 -247830883 - L2 LINE L2 -772 2542 2112 259 381 7 0 chr2 5425996 5426135 -247830448 + L2 LINE L2 3133 3272 0 224 29 86 0 chr2 5426799 5426834 -247829749 + T-rich Low_complexity Low_complexity 4 41 0 2318 106 0 0 chr2 5427504 5427797 -247828786 + AluSx SINE Alu 5 297 -15 257 209 11 22 chr2 5427799 5427890 -247828693 + (TA)n Simple_repeat Simple_repeat 1 90 0 1992 137 0 0 chr2 5428923 5429200 -247827383 + AluSx SINE Alu 1 277 -35 220 26 26 26 chr2 5429204 5429242 -247827341 + (CAAAA)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr2 5431454 5431475 -247825108 + AT_rich Low_complexity Low_complexity 1 21 0 1871 152 10 3 chr2 5431475 5431764 -247824819 - AluSx SINE Alu -20 292 2 2174 108 3 13 chr2 5432231 5432538 -247824045 - AluY SINE Alu -7 304 1 591 236 99 6 chr2 5436170 5436352 -247820231 - MER3 DNA MER1_type -1 208 10 1872 137 4 0 chr2 5436643 5436913 -247819670 + AluSx SINE Alu 22 292 -20 187 313 0 0 chr2 5436947 5436995 -247819588 - L2 LINE L2 -16 3297 3250 419 228 123 49 chr2 5437016 5437178 -247819405 - MIR SINE MIR -19 243 70 1925 110 10 61 chr2 5437595 5437905 -247818678 - AluSx SINE Alu -13 299 6 278 0 0 51 chr2 5437905 5437944 -247818639 + (TTTG)n Simple_repeat Simple_repeat 2 38 0 1233 207 73 25 chr2 5437946 5438221 -247818362 - AluJb SINE Alu -24 288 1 1191 103 65 73 chr2 5438598 5438830 -247817753 + MER30 DNA MER1_type 1 230 0 2118 104 7 0 chr2 5439030 5439317 -247817266 - AluSx SINE Alu -23 289 1 181 339 28 0 chr2 5440386 5440495 -247816088 - MIR SINE MIR -56 206 95 1295 105 5 20 chr2 5440547 5440747 -247815836 + L1PA15 LINE L1 5962 6158 -7 2072 126 0 35 chr2 5441680 5441998 -247814585 - AluSx SINE Alu -5 307 1 231 315 169 23 chr2 5442002 5442351 -247814232 + L2 LINE L2 1989 2388 -926 183 42 0 0 chr2 5443145 5443169 -247813414 + (CATTC)n Simple_repeat Simple_repeat 1 24 0 250 292 14 0 chr2 5444979 5445051 -247811532 + tRNA-Ile-ATT tRNA tRNA 1 73 -4 23 0 0 0 chr2 5446208 5446231 -247810352 + AT_rich Low_complexity Low_complexity 1 23 0 203 122 24 24 chr2 5447001 5447042 -247809541 + A-rich Low_complexity Low_complexity 4 44 0 273 329 120 12 chr2 5447239 5447406 -247809177 + MIR SINE MIR 3 187 -75 784 187 45 90 chr2 5447472 5447740 -247808843 + MLT1A1 LTR MaLR 110 365 0 637 221 0 7 chr2 5447859 5447999 -247808584 + L1PB4 LINE L1 6018 6156 0 575 225 62 0 chr2 5448466 5448595 -247807988 + MLT1A2 LTR MaLR 4 140 -234 1927 155 52 22 chr2 5448595 5448957 -247807626 + THE1C LTR MaLR 1 373 -2 9346 143 24 36 chr2 5448959 5450557 -247806026 + THE1C-int LTR MaLR 3 1580 0 1649 191 55 12 chr2 5450557 5450902 -247805681 + THE1C LTR MaLR 1 360 -15 810 222 54 42 chr2 5450914 5451153 -247805430 + MLT1A2 LTR MaLR 133 374 0 189 171 0 0 chr2 5452117 5452152 -247804431 + (TA)n Simple_repeat Simple_repeat 2 36 0 225 273 23 0 chr2 5452154 5452242 -247804341 - L1MC4 LINE L1 -1339 6703 6614 232 254 0 17 chr2 5452242 5452301 -247804282 + (TATG)n Simple_repeat Simple_repeat 2 59 0 243 270 0 0 chr2 5452301 5452390 -247804193 + L1MC4 LINE L1 6614 6702 -1340 231 277 153 7 chr2 5452480 5452617 -247803966 - MER103 DNA DNA -8 158 2 306 319 111 21 chr2 5452760 5452904 -247803679 - MER5A DNA MER1_type -31 158 2 211 327 29 39 chr2 5453719 5453823 -247802760 - MIR3 SINE MIR -35 173 71 352 285 69 14 chr2 5455451 5455595 -247800988 - MER5A DNA MER1_type -11 178 27 480 152 36 27 chr2 5455732 5455844 -247800739 - L1MB4 LINE L1 -1 6179 6067 2154 104 30 0 chr2 5455896 5456194 -247800389 - AluSg1 SINE Alu -2 307 1 2411 211 20 10 chr2 5456194 5456697 -247799886 - L1MB4 LINE L1 -106 6074 5567 299 318 8 8 chr2 5457325 5457457 -247799126 + (TGG)n Simple_repeat Simple_repeat 3 134 0 263 226 78 35 chr2 5457968 5458083 -247798500 + Charlie8 DNA MER1_type 73 192 -2225 244 325 0 8 chr2 5458140 5458318 -247798265 + (CCA)n Simple_repeat Simple_repeat 1 176 0 372 315 6 22 chr2 5458399 5458580 -247798003 + (CACCAT)n Simple_repeat Simple_repeat 1 178 0 * 442 307 11 6 chr2 5458458 5458637 -247797946 + (CCA)n Simple_repeat Simple_repeat 1 180 0 268 346 13 0 chr2 5458599 5458755 -247797828 + (CACCAT)n Simple_repeat Simple_repeat 1 158 0 * 223 250 56 28 chr2 5459357 5459429 -247797154 + L2 LINE L2 3147 3220 -52 2494 59 0 0 chr2 5460344 5460647 -247795936 - AluY SINE Alu -8 303 1 211 189 0 0 chr2 5462049 5462086 -247794497 + (TG)n Simple_repeat Simple_repeat 2 38 0 2241 104 16 0 chr2 5462124 5462431 -247794152 - AluSq SINE Alu -1 312 1 2153 139 47 36 chr2 5463055 5463415 -247793168 - THE1B LTR MaLR 0 364 1 11988 106 13 8 chr2 5463415 5464987 -247791596 - THE1B-int LTR MaLR 0 1580 1 2207 126 47 49 chr2 5464987 5465352 -247791231 - THE1B LTR MaLR 0 364 1 212 253 13 0 chr2 5466962 5467037 -247789546 + (TA)n Simple_repeat Simple_repeat 1 76 0 2218 118 7 10 chr2 5467056 5467360 -247789223 - AluSx SINE Alu -9 303 1 22 0 0 0 chr2 5467611 5467633 -247788950 + AT_rich Low_complexity Low_complexity 1 22 0 403 171 19 0 chr2 5468425 5468530 -247788053 + (TG)n Simple_repeat Simple_repeat 2 108 0 218 205 53 41 chr2 5468585 5468756 -247787827 + (TG)n Simple_repeat Simple_repeat 1 173 0 289 117 33 0 chr2 5468800 5468860 -247787723 + (TG)n Simple_repeat Simple_repeat 2 63 0 309 266 182 13 chr2 5469443 5469597 -247786986 + L1ME3A LINE L1 5986 6165 -5 339 285 128 75 chr2 5469662 5469943 -247786640 + L1MB2 LINE L1 969 1264 -5585 180 341 71 0 chr2 5470667 5470752 -247785831 + L2 LINE L2 2710 2800 -514 228 214 0 0 chr2 5470766 5470822 -247785761 + (ATG)n Simple_repeat Simple_repeat 1 56 0 1915 158 0 0 chr2 5470877 5471168 -247785415 + AluSx SINE Alu 21 311 -1 357 223 204 32 chr2 5471172 5471329 -247785254 - MIR SINE MIR -63 199 16 202 304 152 27 chr2 5471730 5471842 -247784741 + L2 LINE L2 3187 3312 -1 2143 106 3 0 chr2 5475459 5475752 -247780831 + AluY SINE Alu 2 295 -16 760 245 70 84 chr2 5476950 5477359 -247779224 + MLT1I LTR MaLR 8 450 0 1814 138 7 24 chr2 5478550 5478887 -247777696 + AluSx SINE Alu 1 332 0 384 304 57 6 chr2 5478996 5479154 -247777429 - MIR SINE MIR -73 189 24 2199 104 0 36 chr2 5479334 5479642 -247776941 - AluSg SINE Alu -13 297 1 1427 237 113 7 chr2 5479683 5480118 -247776465 - L1ME2 LINE L1 -77 6087 5607 246 239 70 0 chr2 5480415 5480486 -247776097 - L1ME2 LINE L1 -673 5491 5416 1680 243 79 58 chr2 5480565 5480822 -247775761 - L1ME2 LINE L1 -742 5442 5192 2003 111 37 17 chr2 5480822 5481120 -247775463 - AluSx SINE Alu -8 304 1 1680 243 79 58 chr2 5481120 5481944 -247774639 - L1ME2 LINE L1 -992 5192 4321 11128 226 50 14 chr2 5481944 5482466 -247774117 + L1MB2 LINE L1 2557 3059 -3814 2204 120 0 0 chr2 5482466 5482765 -247773818 + AluSq SINE Alu 1 299 -14 11128 226 50 14 chr2 5482765 5485051 -247771532 + L1MB2 LINE L1 3059 5571 -1302 195 100 0 0 chr2 5485051 5485081 -247771502 + (CAGA)n Simple_repeat Simple_repeat 4 33 0 11128 226 50 14 chr2 5485081 5486162 -247770421 + L1MB2 LINE L1 5571 6612 -261 2536 254 80 38 chr2 5486165 5486776 -247769807 - L1ME2 LINE L1 -2413 3733 3149 181 0 33 33 chr2 5486776 5486806 -247769777 + (TTTTG)n Simple_repeat Simple_repeat 2 31 0 2536 254 80 38 chr2 5486806 5487475 -247769108 - L1ME2 LINE L1 -2997 3149 2399 21 57 0 0 chr2 5487880 5487915 -247768668 + AT_rich Low_complexity Low_complexity 1 35 0 326 307 145 22 chr2 5488173 5488352 -247768231 + MIR3 SINE MIR 8 208 0 284 303 25 0 chr2 5488584 5488703 -247767880 - L1ME LINE L1 -304 5817 5696 2499 71 0 3 chr2 5489171 5489479 -247767104 + AluY SINE Alu 1 307 -4 502 275 67 42 chr2 5490020 5490260 -247766323 + MIR SINE MIR 4 249 -13 3480 187 108 28 chr2 5490837 5491962 -247764621 + L1MB7 LINE L1 4883 6103 -81 933 271 13 4 chr2 5492244 5492469 -247764114 + Charlie1 DNA MER1_type 1 227 -2534 636 234 0 0 chr2 5492463 5492604 -247763979 + Charlie1 DNA MER1_type 2620 2760 -1 * 198 300 0 71 chr2 5492827 5492897 -247763686 - L2 LINE L2 -55 3217 3153 187 372 44 22 chr2 5493108 5493245 -247763338 + L2 LINE L2 3132 3271 -1 462 153 0 90 chr2 5495913 5496024 -247760559 - MER53 DNA DNA 0 189 89 393 276 17 26 chr2 5496916 5497032 -247759551 + MIR SINE MIR 33 147 -61 21 57 0 0 chr2 5498439 5498474 -247758109 + AT_rich Low_complexity Low_complexity 1 35 0 258 105 0 0 chr2 5499483 5499521 -247757062 + (CA)n Simple_repeat Simple_repeat 1 38 0 243 0 0 0 chr2 5500364 5500391 -247756192 + (TG)n Simple_repeat Simple_repeat 1 27 0 245 281 37 49 chr2 5501586 5501668 -247754915 - MLT1K LTR MaLR -356 232 152 318 296 134 23 chr2 5502438 5502610 -247753973 - MIR SINE MIR -43 219 29 247 250 94 42 chr2 5503433 5503529 -247753054 - MIR SINE MIR -114 148 48 909 286 129 11 chr2 5503578 5503949 -247752634 + LTR16C LTR ERVL 69 483 -8 255 282 13 0 chr2 5504371 5504449 -247752134 - MER116 DNA Mariner 0 80 2 386 302 41 24 chr2 5504565 5504734 -247751849 + MIR SINE MIR 76 247 -15 195 356 82 22 chr2 5505219 5505254 -247751329 + MIR SINE MIR 49 80 -182 7009 152 43 13 chr2 5505254 5505502 -247751081 - Tigger3b DNA MER2_type -1797 1231 992 2031 134 0 0 chr2 5505502 5505959 -247750624 + AluSq SINE Alu 1 457 0 7009 152 43 13 chr2 5505959 5506905 -247749678 - Tigger3b DNA MER2_type -2036 992 1 195 356 82 22 chr2 5506905 5507004 -247749579 + MIR SINE MIR 80 191 -71 285 371 68 34 chr2 5507439 5507760 -247748823 + L2 LINE L2 2311 2642 -672 417 326 27 27 chr2 5507761 5507948 -247748635 - LTR16C LTR ERVL 0 491 305 1936 189 47 14 chr2 5508187 5508547 -247748036 - MSTD LTR MaLR 0 396 25 600 128 262 28 chr2 5508897 5509038 -247747545 - MER3 DNA MER1_type -6 203 30 479 279 38 25 chr2 5509084 5509242 -247747341 + MLT1H LTR MaLR 10 169 -380 485 274 0 16 chr2 5510155 5510279 -247746304 - MSTD LTR MaLR -78 318 197 217 239 0 0 chr2 5510353 5510399 -247746184 + MIR SINE MIR 89 134 -128 308 43 0 43 chr2 5511111 5511158 -247745425 + (TAA)n Simple_repeat Simple_repeat 2 46 0 429 293 99 42 chr2 5511574 5511765 -247744818 + MIR3 SINE MIR 1 202 -6 382 281 44 0 chr2 5512161 5512296 -247744287 - MIR3 SINE MIR -1 207 67 238 279 0 47 chr2 5512729 5512815 -247743768 + GA-rich Low_complexity Low_complexity 5 86 0 2384 64 0 0 chr2 5513901 5514243 -247742340 + AluY SINE Alu 1 342 0 256 272 87 11 chr2 5514386 5514478 -247742105 + MIR SINE MIR 91 189 -73 23 0 0 0 chr2 5515587 5515610 -247740973 + AT_rich Low_complexity Low_complexity 1 23 0 371 330 44 53 chr2 5515714 5516056 -247740527 - L2 LINE L2 -801 2513 2175 1337 219 34 70 chr2 5516174 5516473 -247740110 - MLT1A2 LTR MaLR 0 374 91 2123 182 79 89 chr2 5516473 5517033 -247739550 - MLT2B3 LTR ERVL 0 554 1 1337 219 34 70 chr2 5517033 5517121 -247739462 - MLT1A2 LTR MaLR -283 91 1 1699 219 102 2 chr2 5517627 5518047 -247738536 + MLT1C LTR MaLR 1 462 -5 1553 212 0 7 chr2 5518578 5518870 -247737713 - AluJb SINE Alu -22 290 1 531 218 69 75 chr2 5519048 5519091 -247737492 - MIR SINE MIR -8 254 212 264 77 0 0 chr2 5519091 5519130 -247737453 + (CA)n Simple_repeat Simple_repeat 2 40 0 531 218 69 75 chr2 5519130 5519188 -247737395 - MIR SINE MIR -50 212 155 2849 109 3 3 chr2 5519188 5519563 -247737020 + THE1C LTR MaLR 1 375 0 531 218 69 75 chr2 5519563 5519648 -247736935 - MIR SINE MIR -107 155 68 214 319 90 54 chr2 5519707 5519873 -247736710 - L2 LINE L2 -919 2395 2224 635 318 60 22 chr2 5520100 5520937 -247735646 + L1ME3 LINE L1 5036 5932 -230 2198 213 33 27 chr2 5521337 5521374 -247735209 - MLT2B1 LTR ERVL 0 520 485 243 0 0 0 chr2 5521374 5521401 -247735182 + (TG)n Simple_repeat Simple_repeat 2 28 0 2198 213 33 27 chr2 5521401 5521880 -247734703 - MLT2B1 LTR ERVL -35 485 1 356 290 0 0 chr2 5522364 5522464 -247734119 - MER91B DNA MER1_type -40 150 51 27 0 0 0 chr2 5524380 5524407 -247732176 + AT_rich Low_complexity Low_complexity 1 27 0 761 243 0 7 chr2 5524793 5524941 -247731642 + FRAM SINE Alu 4 150 -26 2407 82 0 13 chr2 5524943 5525247 -247731336 - AluSc SINE Alu -9 300 1 39 38 0 0 chr2 5525247 5525300 -247731283 + AT_rich Low_complexity Low_complexity 1 53 0 458 277 3 2 chr2 5526711 5526834 -247729749 - MLT1E2 LTR MaLR -202 424 262 894 289 53 73 chr2 5526883 5527256 -247729327 + HAL1 LINE L1 1054 1406 -1101 2277 111 0 16 chr2 5527256 5527571 -247729012 + AluSg SINE Alu 1 310 0 894 289 53 73 chr2 5527571 5527963 -247728620 + HAL1 LINE L1 1406 1804 -703 480 151 2 8 chr2 5528790 5528878 -247727705 + L1PB1 LINE L1 5698 5782 -369 419 147 39 0 chr2 5528897 5528999 -247727584 + (TA)n Simple_repeat Simple_repeat 1 106 0 2981 65 3 13 chr2 5528999 5529371 -247727212 + L1PB1 LINE L1 5782 6149 -2 2097 116 0 3 chr2 5529745 5530063 -247726520 - AluSq SINE Alu 0 317 1 2330 70 3 7 chr2 5530321 5530620 -247725963 + AluY SINE Alu 1 298 -13 2179 128 3 0 chr2 5580744 5581048 -247675535 + AluSx SINE Alu 1 305 -7 403 349 17 6 chr2 5581190 5581362 -247675221 + L2 LINE L2 2606 2779 -535 1932 135 0 0 chr2 5581419 5581686 -247674897 - AluSx SINE Alu -45 267 1 185 349 0 12 chr2 5582757 5582840 -247673743 - MIR SINE MIR -44 218 137 287 279 146 24 chr2 5582964 5583129 -247673454 + L1ME LINE L1 5420 5604 -560 2011 133 13 3 chr2 5583641 5583942 -247672641 - AluSp SINE Alu -5 308 5 995 209 33 113 chr2 5584226 5584623 -247671960 - MLT1A1 LTR MaLR 0 365 1 220 298 0 0 chr2 5584642 5584699 -247671884 - L3 LINE CR1 -1 1576 1520 289 330 30 88 chr2 5584828 5585125 -247671458 - L2 LINE L2 0 3272 2993 401 294 44 7 chr2 5585336 5585472 -247671111 + MIR3 SINE MIR 6 146 -62 412 264 65 75 chr2 5586152 5586353 -247670230 - MIR SINE MIR -34 228 30 360 43 0 0 chr2 5586992 5587038 -247669545 + (CA)n Simple_repeat Simple_repeat 1 46 0 354 287 25 0 chr2 5587069 5587191 -247669392 + MER112 DNA MER1_type 136 260 0 260 146 39 59 chr2 5587425 5587819 -247668764 + (TA)n Simple_repeat Simple_repeat 1 386 0 440 293 67 34 chr2 5587909 5588117 -247668466 + L2 LINE L2 3099 3313 0 184 50 100 0 chr2 5589263 5589303 -247667280 + (TAAA)n Simple_repeat Simple_repeat 3 46 0 347 226 89 24 chr2 5590025 5590193 -247666390 - Looper DNA T2_type -10 1548 1370 * 557 264 6 0 chr2 5590186 5590349 -247666234 - Looper DNA T2_type -598 960 797 521 255 50 0 chr2 5590421 5590582 -247666001 - MER3 DNA MER1_type -20 189 21 550 195 8 0 chr2 5590592 5590710 -247665873 - L1MB1 LINE L1 -340 5828 5710 1762 138 138 9 chr2 5590751 5591100 -247665483 + MSTA LTR MaLR 2 395 -33 1929 161 0 25 chr2 5591102 5591418 -247665165 - AluJo SINE Alu -4 308 1 556 143 10 0 chr2 5591435 5591533 -247665050 - L1MA9 LINE L1 -325 5987 5889 855 299 92 9 chr2 5591542 5591870 -247664713 + LTR40a LTR ERVL 164 518 -1 1499 214 70 34 chr2 5591880 5592379 -247664204 - Looper DNA T2_type -989 569 53 1031 228 14 0 chr2 5593212 5593423 -247663160 - MER58A DNA MER1_type -9 215 2 2403 201 8 10 chr2 5594638 5595161 -247661422 - L1MB7 LINE L1 0 6184 5663 266 286 162 12 chr2 5595401 5595547 -247661036 + MIR SINE MIR 12 176 -86 479 222 43 43 chr2 5596074 5596236 -247660347 - MER20 DNA MER1_type -53 166 5 1264 291 106 39 chr2 5596250 5597276 -247659307 - L1MEc LINE L1 -4342 2054 921 3680 105 2 0 chr2 5597276 5597789 -247658794 - MER75 DNA T2_type 0 514 1 1264 291 106 39 chr2 5597789 5598066 -247658517 - L1MEc LINE L1 -5475 921 664 201 337 20 31 chr2 5598121 5598219 -247658364 - MER5B DNA MER1_type -77 101 5 1906 150 7 7 chr2 5598284 5598578 -247658005 + AluSx SINE Alu 1 294 -18 226 204 0 0 chr2 5598974 5599018 -247657565 - MER58 DNA MER1_type 0 2420 2377 326 297 64 18 chr2 5599018 5599237 -247657346 - L1MEc LINE L1 -6117 279 51 2003 167 6 6 chr2 5600037 5600373 -247656210 - MER1B DNA MER1_type -1 336 1 210 327 139 0 chr2 5600428 5600529 -247656054 - L2 LINE L2 -8 3264 3150 273 282 13 0 chr2 5600952 5601030 -247655553 + L2 LINE L2 3193 3271 -1 210 71 0 0 chr2 5601667 5601695 -247654888 + (T)n Simple_repeat Simple_repeat 1 28 0 695 255 145 33 chr2 5602470 5602925 -247653658 - HAL1 LINE L1 -125 2382 1877 578 240 125 72 chr2 5602978 5603282 -247653301 - HAL1 LINE L1 -714 1793 1474 1417 241 27 22 chr2 5604491 5604860 -247651723 + MLT1A2 LTR MaLR 1 371 -3 306 381 23 11 chr2 5607060 5607236 -247649347 + MIR3 SINE MIR 12 189 -19 275 271 42 25 chr2 5608856 5608974 -247647609 + MIR SINE MIR 96 215 -47 780 243 132 70 chr2 5609881 5610268 -247646315 - MLT2D LTR ERVL -2 412 2 1630 179 0 25 chr2 5610313 5610598 -247645985 + AluJo SINE Alu 35 312 0 447 297 92 41 chr2 5611047 5611189 -247645394 - MIR SINE MIR -23 239 83 2150 160 78 10 chr2 5611189 5611589 -247644994 - MSTA LTR MaLR 0 428 2 447 297 92 41 chr2 5611589 5611641 -247644942 - MIR SINE MIR -179 83 35 285 314 121 24 chr2 5612026 5612233 -247644350 + MLT1K LTR MaLR 326 552 -36 205 148 19 19 chr2 5612771 5612825 -247643758 + (CATATA)n Simple_repeat Simple_repeat 6 59 0 255 40 40 20 chr2 5613501 5613551 -247643032 + (TA)n Simple_repeat Simple_repeat 2 52 0 1603 160 8 8 chr2 5614347 5614610 -247641973 + AluSx SINE Alu 48 310 -2 278 93 56 37 chr2 5615197 5615305 -247641278 + (TA)n Simple_repeat Simple_repeat 2 111 0 2162 148 0 0 chr2 5615966 5616271 -247640312 - AluSx SINE Alu -7 305 1 1833 133 35 0 chr2 5616464 5616770 -247639813 - AluSx SINE Alu 0 333 19 442 320 131 10 chr2 5617547 5617944 -247638639 - L2 LINE L2 -17 3296 2852 207 369 46 31 chr2 5618189 5618319 -247638264 - L2 LINE L2 0 3272 3141 2127 185 49 21 chr2 5618589 5619017 -247637566 + MLT1C LTR MaLR 28 467 0 283 314 163 33 chr2 5620083 5620414 -247636169 - MLT1I LTR MaLR -35 374 1 2288 108 3 3 chr2 5620471 5620778 -247635805 + AluSp SINE Alu 1 307 -6 193 313 50 0 chr2 5621728 5621808 -247634775 + MIR SINE MIR 46 129 -133 370 240 164 27 chr2 5622017 5622163 -247634420 + L1MC5 LINE L1 7746 7911 -50 235 330 139 0 chr2 5622660 5622775 -247633808 - MIR3 SINE MIR -63 145 15 285 316 0 21 chr2 5623332 5623427 -247633156 + L2 LINE L2 3175 3267 -5 279 161 0 0 chr2 5623583 5623639 -247632944 + (TG)n Simple_repeat Simple_repeat 1 56 0 609 263 60 23 chr2 5623749 5623966 -247632617 + MIR SINE MIR 13 237 -25 1592 157 39 14 chr2 5624054 5624334 -247632249 - AluJb SINE Alu -25 287 1 250 311 41 8 chr2 5625725 5625847 -247630736 - L1ME4a LINE L1 -6 6115 5990 1071 93 17 29 chr2 5625914 5626086 -247630497 - L1PA13 LINE L1 -1 6162 5993 786 256 40 4 chr2 5626124 5626351 -247630232 - MIR SINE MIR -21 241 7 23 33 0 0 chr2 5626755 5626785 -247629798 + AT_rich Low_complexity Low_complexity 1 30 0 279 287 172 0 chr2 5626890 5627012 -247629571 - L1MC4 LINE L1 -375 7667 7525 251 204 37 0 chr2 5627848 5627902 -247628681 - MIR SINE MIR -192 70 15 821 173 84 35 chr2 5629849 5630075 -247626508 + L1MB7 LINE L1 5947 6183 -1 2114 119 3 22 chr2 5630214 5630533 -247626050 - AluSp SINE Alu 0 313 1 7102 53 6 11 chr2 5631571 5633001 -247623582 + L1PA7 LINE L1 4727 6151 -3 2002 208 57 5 chr2 5633014 5633456 -247623127 + MLT1C LTR MaLR 3 467 0 244 48 48 0 chr2 5634665 5634707 -247621876 + (TTTG)n Simple_repeat Simple_repeat 2 45 0 288 53 0 0 chr2 5635058 5635096 -247621487 + (TG)n Simple_repeat Simple_repeat 2 39 0 2020 140 10 13 chr2 5637364 5637671 -247618912 - AluSx SINE Alu -6 306 1 379 259 54 22 chr2 5639834 5640019 -247616564 + LTR16B LTR ERVL 187 377 -87 201 178 0 0 chr2 5642298 5642343 -247614240 - MER5A DNA MER1_type -22 167 123 1000 36 15 15 chr2 5642626 5642763 -247613820 + (GAAA)n Simple_repeat Simple_repeat 2 138 0 2849 13 0 0 chr2 5643476 5643784 -247612799 - AluYa5 SINE Alu -3 308 1 208 199 122 5 chr2 5644245 5644313 -247612270 + MIR SINE MIR 49 123 -85 2185 289 77 36 chr2 5645846 5647049 -247609534 + L2 LINE L2 1157 2408 -906 431 324 78 15 chr2 5647507 5647967 -247608616 + L2 LINE L2 2820 3308 -5 308 342 98 5 chr2 5648958 5649142 -247607441 + MIR SINE MIR 2 202 -60 193 306 74 46 chr2 5649330 5649438 -247607145 - L2 LINE L2 0 3272 3162 191 297 63 9 chr2 5649498 5649609 -247606974 - L2 LINE L2 -211 3061 2945 1913 178 108 11 chr2 5649660 5650093 -247606490 - L1MB3 LINE L1 -1 6182 5708 472 260 0 8 chr2 5650133 5650256 -247606327 + L2 LINE L2 3187 3308 -5 228 300 42 50 chr2 5650274 5650394 -247606189 - MIR SINE MIR -73 189 71 193 330 34 0 chr2 5650501 5650589 -247605994 + MIR SINE MIR 64 154 -108 190 291 23 11 chr2 5650790 5650877 -247605706 + MIR SINE MIR 62 148 -63 4251 152 26 1 chr2 5651591 5652308 -247604275 - L1PB4 LINE L1 -8 6148 5414 426 293 112 21 chr2 5653774 5653962 -247602621 - MIR SINE MIR -30 232 28 205 250 0 0 chr2 5654069 5654113 -247602470 - L2 LINE L2 -556 2758 2715 221 186 17 68 chr2 5654795 5654854 -247601729 - L2 LINE L2 -14 3258 3203 296 286 105 9 chr2 5654972 5655077 -247601506 + MIR SINE MIR 34 148 -114 210 284 82 75 chr2 5656914 5657048 -247599535 + MIR SINE MIR 48 182 -80 555 281 44 78 chr2 5657109 5657257 -247599326 - L2 LINE L2 -4 3309 3157 2078 115 14 0 chr2 5657257 5657543 -247599040 - AluSq SINE Alu -18 295 6 555 281 44 78 chr2 5657543 5657714 -247598869 - L2 LINE L2 -156 3157 3001 327 263 182 0 chr2 5659208 5659307 -247597276 + L2 LINE L2 3142 3258 -14 21 36 0 0 chr2 5659791 5659819 -247596764 + AT_rich Low_complexity Low_complexity 1 28 0 383 293 84 22 chr2 5659914 5660075 -247596508 + MIR3 SINE MIR 20 193 -15 1741 172 10 3 chr2 5660737 5661040 -247595543 - AluJb SINE Alu -5 307 3 2751 23 3 0 chr2 5661168 5661477 -247595106 - AluYa5 SINE Alu -1 310 1 1869 233 40 12 chr2 5661974 5662477 -247594106 + MER97a DNA MER1_type? 369 885 -9 238 299 122 20 chr2 5662801 5662948 -247593635 + MIR SINE MIR 74 235 -27 269 100 20 0 chr2 5663055 5663105 -247593478 + (TC)n Simple_repeat Simple_repeat 1 51 0 211 319 0 0 chr2 5663113 5663182 -247593401 + (CATA)n Simple_repeat Simple_repeat 3 71 0 261 153 82 0 chr2 5664240 5664296 -247592287 - MLT2B3 LTR ERVL 0 554 394 209 184 0 0 chr2 5664296 5664334 -247592249 + (CAGA)n Simple_repeat Simple_repeat 4 41 0 736 144 17 22 chr2 5664334 5664514 -247592069 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 2473 153 113 17 chr2 5664550 5665021 -247591562 - MLT2B3 LTR ERVL -38 516 1 299 272 72 32 chr2 5667758 5667883 -247588700 - L2 LINE L2 -1 3271 3142 341 327 48 48 chr2 5669151 5669402 -247587181 - L3 LINE CR1 -72 1505 1255 243 313 90 8 chr2 5669837 5669971 -247586612 - MIR SINE MIR -8 254 110 638 227 39 0 chr2 5671977 5672131 -247584452 + L1MD1 LINE L1 6083 6242 0 25 0 0 0 chr2 5673228 5673253 -247583330 + AT_rich Low_complexity Low_complexity 1 25 0 218 167 24 0 chr2 5673308 5673350 -247583233 - MIR SINE MIR -112 150 108 201 238 129 20 chr2 5673554 5673655 -247582928 - MIR SINE MIR -77 131 20 304 323 21 21 chr2 5673720 5673816 -247582767 + MIR SINE MIR 21 116 -92 24 0 0 0 chr2 5674000 5674024 -247582559 + AT_rich Low_complexity Low_complexity 1 24 0 3445 158 10 22 chr2 5674049 5674216 -247582367 - L1MA5 LINE L1 0 6300 6132 949 175 0 19 chr2 5674216 5674376 -247582207 + FRAM SINE Alu 1 157 -9 3445 158 10 22 chr2 5674376 5674833 -247581750 - L1MA5 LINE L1 -168 6132 5684 2338 197 3 37 chr2 5674833 5675378 -247581205 + L1MA5 LINE L1 5159 5664 -636 606 240 67 0 chr2 5675411 5675561 -247581022 - MER5A DNA MER1_type -29 160 1 384 88 0 0 chr2 5676596 5676653 -247579930 + (CA)n Simple_repeat Simple_repeat 1 57 0 352 284 0 0 chr2 5677718 5677799 -247578784 - L2 LINE L2 0 3313 3233 264 322 96 9 chr2 5678081 5678196 -247578387 + MIR SINE MIR 20 144 -118 313 287 111 28 chr2 5678432 5678648 -247577935 - HsTC2 DNA Tc2 -1020 878 645 2373 87 7 0 chr2 5678815 5679113 -247577470 + AluSc SINE Alu 2 301 -8 21 36 0 0 chr2 5679234 5679262 -247577321 + AT_rich Low_complexity Low_complexity 1 28 0 213 235 0 29 chr2 5679849 5679917 -247576666 + (TATATG)n Simple_repeat Simple_repeat 4 69 0 242 293 49 0 chr2 5680197 5680279 -247576304 - HsTC2 DNA Tc2 -1329 569 484 * 264 247 13 13 chr2 5680272 5680349 -247576234 - HsTC2 DNA Tc2 -1597 301 225 1976 50 138 4 chr2 5680349 5680609 -247575974 - AluY SINE Alu -6 295 1 22 0 0 0 chr2 5681505 5681527 -247575056 + AT_rich Low_complexity Low_complexity 1 22 0 5015 181 17 13 chr2 5681536 5681916 -247574667 + Tigger3b DNA MER2_type 1 378 -2650 1916 117 50 7 chr2 5681916 5682223 -247574360 - AluSx SINE Alu 0 312 1 5015 181 17 13 chr2 5682223 5682910 -247573673 + Tigger3b DNA MER2_type 378 1231 0 1770 257 82 12 chr2 5683203 5683811 -247572772 - L1MD3 LINE L1 -2 7980 7150 1576 186 133 9 chr2 5683858 5684203 -247572380 - MLT1B LTR MaLR 0 390 3 201 171 24 0 chr2 5685101 5685142 -247571441 + (TG)n Simple_repeat Simple_repeat 2 43 0 311 279 91 61 chr2 5685650 5685847 -247570736 - L2 LINE L2 -4 3309 3107 785 225 108 95 chr2 5686340 5686683 -247569900 - MLT1H LTR MaLR -5 544 148 2082 116 0 26 chr2 5686683 5686985 -247569598 + AluSc SINE Alu 1 294 -15 785 225 108 95 chr2 5686985 5687121 -247569462 - MLT1H LTR MaLR -401 148 15 552 246 75 73 chr2 5687700 5688111 -247568472 + L1MEd LINE L1 823 1234 -4885 310 333 91 29 chr2 5688124 5688367 -247568216 + L1MEd LINE L1 1233 1490 -4639 2161 144 33 33 chr2 5688508 5688870 -247567713 - THE1B LTR MaLR 0 364 3 302 293 78 42 chr2 5690313 5690480 -247566103 + MIR SINE MIR 71 243 -19 285 294 37 37 chr2 5690514 5690623 -247565960 + L3 LINE CR1 1378 1486 -91 186 313 0 0 chr2 5690626 5690674 -247565909 + L2 LINE L2 3212 3259 -13 239 203 31 16 chr2 5690986 5691050 -247565533 - Charlie8 DNA MER1_type -2221 196 132 279 323 39 47 chr2 5692032 5692159 -247564424 + MIR SINE MIR 18 143 -119 341 172 0 0 chr2 5692785 5692843 -247563740 - L1PA16 LINE L1 -200 5966 5909 22 0 0 0 chr2 5693837 5693859 -247562724 + AT_rich Low_complexity Low_complexity 1 22 0 1494 162 4 4 chr2 5693873 5694102 -247562481 - AluSx SINE Alu -31 281 53 401 279 55 64 chr2 5694467 5694686 -247561897 - L2 LINE L2 -5 3308 3092 4683 109 8 5 chr2 5694985 5695624 -247560959 - L1PA10 LINE L1 -11 6157 5517 221 408 17 11 chr2 5696086 5696265 -247560318 + MIR SINE MIR 27 206 -56 212 348 0 0 chr2 5696382 5696451 -247560132 + L2 LINE L2 3204 3272 0 949 234 161 57 chr2 5696936 5697602 -247558981 - HAL1 LINE L1 -83 2424 1690 1039 258 119 34 chr2 5697692 5697961 -247558622 - HAL1 LINE L1 -647 1860 1537 2019 129 7 13 chr2 5697961 5698320 -247558263 + AluSx SINE Alu 1 312 0 1039 258 119 34 chr2 5698320 5698496 -247558087 - HAL1 LINE L1 -970 1537 1377 660 256 76 19 chr2 5698907 5699169 -247557414 - HAL1 LINE L1 -1119 1388 1112 609 314 181 13 chr2 5699195 5699666 -247556917 - HAL1 LINE L1 -1540 967 418 1182 238 32 18 chr2 5699707 5699989 -247556594 - HAL1 LINE L1 -2208 299 14 182 322 132 40 chr2 5700157 5700331 -247556252 - MIR SINE MIR 0 262 73 291 334 62 15 chr2 5700889 5701053 -247555530 + MIR SINE MIR 5 171 -37 32 0 0 0 chr2 5701100 5701132 -247555451 + AT_rich Low_complexity Low_complexity 1 32 0 532 330 84 44 chr2 5701286 5701703 -247554880 + L2 LINE L2 2204 2644 -670 2718 116 36 3 chr2 5701703 5702066 -247554517 + THE1C LTR MaLR 1 375 0 532 330 84 44 chr2 5702066 5702126 -247554457 + L2 LINE L2 2644 2700 -614 309 297 89 0 chr2 5702487 5702588 -247553995 + L2 LINE L2 3204 3313 0 203 224 20 0 chr2 5702663 5702712 -247553871 + (TAAA)n Simple_repeat Simple_repeat 1 50 0 198 0 0 0 chr2 5706325 5706347 -247550236 + (TTTTA)n Simple_repeat Simple_repeat 2 23 0 1001 236 72 43 chr2 5707044 5707392 -247549191 - MLT1C LTR MaLR -104 363 6 2322 104 0 7 chr2 5707446 5707755 -247548828 + AluSq SINE Alu 1 307 -6 920 274 131 18 chr2 5708802 5709305 -247547278 + L1ME4a LINE L1 5557 6116 -5 1849 151 0 7 chr2 5709956 5710241 -247546342 + AluSx SINE Alu 21 303 -9 22 35 0 0 chr2 5710306 5710335 -247546248 + AT_rich Low_complexity Low_complexity 1 29 0 1544 109 60 0 chr2 5710684 5710951 -247545632 + AluSc SINE Alu 1 283 -26 305 89 0 0 chr2 5711068 5711113 -247545470 + AluSc SINE Alu 253 297 -2 2631 51 0 0 chr2 5711380 5711691 -247544892 - AluYa5 SINE Alu 0 311 1 228 347 0 21 chr2 5712703 5712798 -247543785 + MIR SINE MIR 24 116 -92 2380 85 3 0 chr2 5712881 5713188 -247543395 - AluY SINE Alu -3 308 1 2092 104 42 3 chr2 5714187 5714475 -247542108 + AluSx SINE Alu 2 300 -12 388 293 129 30 chr2 5714839 5715071 -247541512 + MLT1J2 LTR MaLR 48 302 -148 213 21 21 83 chr2 5715359 5715407 -247541176 + (TTTTTG)n Simple_repeat Simple_repeat 4 48 0 446 235 18 12 chr2 5715685 5715851 -247540732 + GA-rich Low_complexity Low_complexity 1 167 0 291 343 71 7 chr2 5717051 5717191 -247539392 + MIR SINE MIR 20 168 -94 181 362 48 38 chr2 5717298 5717403 -247539180 - L2 LINE L2 -22 3250 3145 2301 52 38 17 chr2 5717610 5717900 -247538683 + AluY SINE Alu 1 296 -15 276 322 86 53 chr2 5718450 5718602 -247537981 - L2 LINE L2 -4 3268 3112 232 360 35 9 chr2 5719421 5719535 -247537048 - MIR SINE MIR -76 132 16 260 341 31 23 chr2 5721129 5721258 -247535325 - MER5B DNA MER1_type -44 134 5 2000 137 3 0 chr2 5721323 5721616 -247534967 + AluSx SINE Alu 1 294 -18 248 111 0 0 chr2 5723998 5724034 -247532549 - U2 snRNA snRNA -152 36 1 328 177 51 0 chr2 5724050 5724129 -247532454 - MIR SINE MIR -115 147 65 2289 75 0 4 chr2 5724133 5724481 -247532102 - AluY SINE Alu 0 347 1 291 54 0 0 chr2 5725255 5725292 -247531291 + (TATG)n Simple_repeat Simple_repeat 2 38 0 256 131 16 16 chr2 5725691 5725752 -247530831 + (TCCA)n Simple_repeat Simple_repeat 1 61 0 793 337 38 27 chr2 5725765 5726335 -247530248 - L2 LINE L2 0 3313 2737 776 226 27 27 chr2 5726358 5726544 -247530039 + MLT2B1 LTR ERVL 1 186 -334 1912 197 33 3 chr2 5726719 5727085 -247529498 + MLT2B1 LTR ERVL 144 520 0 404 351 71 14 chr2 5727102 5727313 -247529270 - L2 LINE L2 -605 2709 2487 22 0 0 0 chr2 5728053 5728075 -247528508 + AT_rich Low_complexity Low_complexity 1 22 0 887 192 0 11 chr2 5728082 5728318 -247528265 - AluJb SINE Alu -17 295 1 276 30 0 0 chr2 5728336 5728369 -247528214 + (A)n Simple_repeat Simple_repeat 1 33 0 2152 297 158 22 chr2 5728708 5729900 -247526683 + L2 LINE L2 1933 3277 -36 2094 132 0 0 chr2 5730093 5730388 -247526195 - AluSx SINE Alu -17 295 1 21 57 0 0 chr2 5730491 5730526 -247526057 + AT_rich Low_complexity Low_complexity 1 35 0 22799 104 3 2 chr2 5730624 5734552 -247522031 - L1PA7 LINE L1 -4 6465 2541 1620 127 17 0 chr2 5734560 5734797 -247521786 - L1PA7 LINE L1 -6213 248 8 551 282 23 0 chr2 5735135 5735355 -247521228 - L1MEc LINE L1 -5466 930 706 467 366 51 15 chr2 5735371 5735702 -247520881 - L1MEc LINE L1 -5941 455 113 1034 204 194 142 chr2 5735710 5736490 -247520093 + MER52A LTR ERV1 667 1486 -269 433 252 16 16 chr2 5736484 5736611 -247519972 + MER52A LTR ERV1 1599 1725 -30 * 236 288 0 0 chr2 5736835 5736908 -247519675 - MER5A DNA MER1_type -113 76 4 231 351 14 0 chr2 5737733 5737807 -247518776 - L2 LINE L2 -206 3066 2992 362 343 30 18 chr2 5737821 5737987 -247518596 + MIR SINE MIR 42 209 -53 1499 227 41 78 chr2 5737999 5738484 -247518099 + MLT1C LTR MaLR 1 467 0 292 283 186 0 chr2 5739781 5739894 -247516689 - L2 LINE L2 -1 3312 3179 455 251 123 18 chr2 5740250 5740413 -247516170 + MIR SINE MIR 2 181 -81 246 358 13 20 chr2 5741130 5741281 -247515302 - MIR3 SINE MIR -4 204 55 228 304 33 22 chr2 5741913 5742005 -247514578 - MIR3 SINE MIR -3 205 113 194 294 0 0 chr2 5743253 5743304 -247513279 - MIR SINE MIR -65 143 93 195 352 62 52 chr2 5744447 5744640 -247511943 + MIR SINE MIR 20 214 -48 227 240 132 107 chr2 5744743 5744864 -247511719 + MIR SINE MIR 61 184 -78 393 239 97 13 chr2 5744901 5745056 -247511527 - MIR SINE MIR -14 248 81 1044 232 30 4 chr2 5746853 5747086 -247509497 + MLT1B LTR MaLR 152 390 0 2540 133 11 3 chr2 5747237 5747598 -247508985 - THE1B LTR MaLR 0 364 1 1254 272 32 3 chr2 5747634 5748005 -247508578 + L1ME2 LINE L1 3938 4319 -1827 888 262 40 15 chr2 5748057 5748385 -247508198 + L1ME2 LINE L1 4409 4744 -1402 1091 280 35 8 chr2 5748385 5748989 -247507594 + L1ME2 LINE L1 4996 5616 -550 1096 217 122 9 chr2 5749001 5749507 -247507076 - MLT1E1 LTR MaLR -14 640 1 1771 235 43 50 chr2 5749514 5750074 -247506509 + L1ME2 LINE L1 5617 6332 -2 223 344 86 6 chr2 5753914 5754077 -247502506 - L3 LINE CR1 -570 1007 832 313 255 0 85 chr2 5754114 5754220 -247502363 - MIR SINE MIR -7 255 159 328 292 101 17 chr2 5754617 5754795 -247501788 + MIR SINE MIR 8 200 -62 195 282 14 28 chr2 5755197 5755268 -247501315 + MIR SINE MIR 69 138 -124 6177 166 59 20 chr2 5756467 5757206 -247499377 + Tigger3b DNA MER2_type 1 805 -2223 1552 190 35 7 chr2 5757206 5757496 -247499087 + AluJb SINE Alu 1 298 -14 6177 166 59 20 chr2 5757496 5757940 -247498643 + Tigger3b DNA MER2_type 805 1230 -1 2544 38 0 0 chr2 5758333 5758623 -247497960 - AluY SINE Alu -21 290 1 323 311 0 0 chr2 5758671 5758761 -247497822 + L1MC4 LINE L1 6614 6703 -1339 237 183 50 0 chr2 5758778 5758838 -247497745 + L1MCa LINE L1 2006 2068 -4358 * 258 256 47 0 chr2 5758805 5758891 -247497692 - L1MC4 LINE L1 -1339 6703 6614 207 100 0 0 chr2 5758896 5758926 -247497657 + (TA)n Simple_repeat Simple_repeat 1 30 0 237 174 0 0 chr2 5758931 5758977 -247497606 - LTR66 LTR ERVL -171 439 394 234 191 0 0 chr2 5758939 5758986 -247497597 + LTR66 LTR ERVL 394 440 -170 * 236 131 16 66 chr2 5759010 5759071 -247497512 - LTR66 LTR ERVL -171 439 382 3336 123 5 9 chr2 5759316 5759884 -247496699 - L1P LINE L1 -3190 2956 2391 1366 82 0 15 chr2 5761176 5761371 -247495212 - AluY SINE Alu -13 298 107 305 224 112 37 chr2 5761502 5761609 -247494974 - MLT1G1 LTR MaLR -243 352 238 2077 147 51 12 chr2 5762137 5762591 -247493992 - L1MC1 LINE L1 -54 6290 5813 1103 303 26 28 chr2 5763676 5764098 -247492485 - L2 LINE L2 0 3313 2893 1982 236 64 75 chr2 5765242 5765932 -247490651 + L1M4 LINE L1 168 849 -5693 1613 260 83 32 chr2 5765938 5766805 -247489778 + L1M4 LINE L1 917 1830 -4816 874 282 62 46 chr2 5766804 5766966 -247489617 + L1M4 LINE L1 2302 2460 -4184 * 192 40 0 0 chr2 5766966 5766991 -247489592 + (CA)n Simple_repeat Simple_repeat 2 26 0 874 282 62 46 chr2 5766991 5767541 -247489042 + L1M4 LINE L1 2460 3042 -3602 253 299 113 0 chr2 5769005 5769102 -247487481 + MIR SINE MIR 82 189 -73 386 350 30 20 chr2 5769234 5769437 -247487146 - MIR SINE MIR -34 228 24 199 328 16 0 chr2 5770761 5770825 -247485758 - MIR SINE MIR -110 152 88 185 266 129 73 chr2 5771945 5772069 -247484514 - MIR3 SINE MIR -11 197 67 566 243 10 0 chr2 5772211 5772314 -247484269 + AluJb SINE Alu 2 105 -207 22 0 0 0 chr2 5774158 5774180 -247482403 + AT_rich Low_complexity Low_complexity 1 22 0 896 197 0 7 chr2 5774187 5774422 -247482161 - AluJb SINE Alu -17 295 1 258 32 0 0 chr2 5774440 5774471 -247482112 + (A)n Simple_repeat Simple_repeat 1 31 0 1783 300 152 28 chr2 5774810 5776006 -247480577 + L2 LINE L2 1933 3277 -36 2521 181 59 33 chr2 5776318 5776453 -247480130 + Tigger3(Golem) DNA MER2_type 2434 2564 -465 1498 194 38 7 chr2 5776453 5776742 -247479841 + AluJb SINE Alu 1 298 -14 2521 181 59 33 chr2 5776742 5777186 -247479397 + Tigger3(Golem) DNA MER2_type 2564 3028 -1 2336 66 3 0 chr2 5777579 5777868 -247478715 - AluY SINE Alu -21 290 1 186 43 0 0 chr2 5777887 5777910 -247478673 + (TC)n Simple_repeat Simple_repeat 2 24 0 430 170 21 0 chr2 5777910 5778004 -247478579 + (TA)n Simple_repeat Simple_repeat 2 97 0 197 175 38 12 chr2 5778163 5778177 -247478406 + (TA)n Simple_repeat Simple_repeat 1 13 -69 1912 99 8 8 chr2 5778177 5778440 -247478143 + AluSc SINE Alu 35 297 -12 197 175 38 12 chr2 5778440 5778505 -247478078 + (TA)n Simple_repeat Simple_repeat 13 82 0 827 281 68 35 chr2 5780658 5781178 -247475405 + L1ME LINE L1 1071 1553 -4873 1148 248 73 29 chr2 5781212 5781788 -247474795 + L1ME LINE L1 5290 5889 -557 1899 201 70 27 chr2 5781788 5782232 -247474351 - MLT1C LTR MaLR 0 467 5 1148 248 73 29 chr2 5782232 5782270 -247474313 + L1ME LINE L1 5889 5924 -522 877 120 0 0 chr2 5782955 5783110 -247473473 + AluSp/q SINE Alu 168 322 0 6571 63 141 13 chr2 5783249 5784146 -247472437 - L1PA5 LINE L1 0 6154 5228 23274 54 3 0 chr2 5784249 5787177 -247469406 - L1P LINE L1 -818 5328 2391 230 175 79 48 chr2 5788402 5788465 -247468118 - MLT1G1 LTR MaLR -1 554 490 1403 72 0 15 chr2 5788471 5788666 -247467917 - AluY SINE Alu -13 298 107 338 250 126 18 chr2 5788667 5789020 -247467563 - MLT1G1 LTR MaLR -66 529 83 253 336 77 10 chr2 5789223 5789327 -247467256 - MIR3 SINE MIR -84 124 14 209 265 0 0 chr2 5789787 5789836 -247466747 - MIR SINE MIR -56 206 158 940 219 73 155 chr2 5790060 5790511 -247466072 + MLT2B1 LTR ERVL 1 414 0 23 78 0 0 chr2 5791404 5791455 -247465128 + AT_rich Low_complexity Low_complexity 1 51 0 221 322 35 26 chr2 5793094 5793209 -247463374 + MIR SINE MIR 25 140 -122 2140 139 3 16 chr2 5795370 5795693 -247460890 + L1PA10 LINE L1 5848 6166 -2 37 23 0 0 chr2 5795966 5796010 -247460573 + AT_rich Low_complexity Low_complexity 1 44 0 1785 56 0 5 chr2 5796060 5796273 -247460310 - L1PA3 LINE L1 -2 6153 5942 261 260 0 0 chr2 5796760 5796864 -247459719 + A-rich Low_complexity Low_complexity 1 104 0 332 155 0 0 chr2 5796980 5797038 -247459545 + THE1B LTR MaLR 307 364 0 2221 257 24 49 chr2 5797038 5797909 -247458674 + L1M2 LINE L1 2633 3483 -3365 1507 186 28 7 chr2 5797909 5798200 -247458383 + AluJb SINE Alu 1 297 -15 2221 257 24 49 chr2 5798200 5798299 -247458284 + L1M2 LINE L1 3483 3583 -3265 996 237 74 43 chr2 5799109 5799459 -247457124 - MLT1C LTR MaLR -104 363 3 2327 103 0 6 chr2 5799510 5799821 -247456762 + AluSq SINE Alu 1 309 -4 5287 175 20 15 chr2 5800176 5801356 -247455227 - L1PBb LINE L1 -4845 1359 172 188 375 54 36 chr2 5801648 5801760 -247454823 - MIR3 SINE MIR -87 121 8 210 118 0 0 chr2 5801949 5801983 -247454600 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 232 298 67 112 chr2 5802013 5802325 -247454258 - L2 LINE L2 -47 3225 2928 2307 97 0 0 chr2 5803780 5804069 -247452514 + AluSc SINE Alu 19 307 -2 180 0 0 0 chr2 5804085 5804105 -247452478 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 434 299 185 45 chr2 5804116 5804538 -247452045 + MLT1K LTR MaLR 75 555 -33 672 271 40 40 chr2 5805150 5805327 -247451256 + MER45A DNA AcHobo 1 177 -1 185 131 66 16 chr2 5805333 5805394 -247451189 + (TAGA)n Simple_repeat Simple_repeat 4 67 0 681 230 8 0 chr2 5806161 5806289 -247450294 - FLAM_A SINE Alu -5 128 2 404 305 40 7 chr2 5806858 5807009 -247449574 + MIR SINE MIR 23 178 -84 1512 164 20 43 chr2 5807761 5808065 -247448518 + Tigger2 DNA MER2_type 2421 2717 -1 416 295 120 33 chr2 5809032 5809700 -247446883 + L2 LINE L2 2580 3311 -2 872 287 104 29 chr2 5810258 5810750 -247445833 - MLT1G1 LTR MaLR -17 578 1 226 285 279 17 chr2 5810755 5810934 -247445649 + L2 LINE L2 3047 3272 0 259 319 62 18 chr2 5810972 5811085 -247445498 + L2 LINE L2 3155 3272 0 852 221 33 14 chr2 5811451 5811664 -247444919 + MER20 DNA MER1_type 2 218 -1 600 220 37 17 chr2 5812218 5812393 -247444190 + LTR41 LTR ERVL 9 201 -594 879 204 40 23 chr2 5812534 5812710 -247443873 + AluJo SINE Alu 1 179 -133 1231 167 13 35 chr2 5812812 5813040 -247443543 - THE1C LTR MaLR -152 223 1 10937 105 37 4 chr2 5813040 5814568 -247442015 - THE1B-int LTR MaLR 0 1580 2 1973 115 58 60 chr2 5814569 5814934 -247441649 - THE1B LTR MaLR 0 364 1 728 206 14 0 chr2 5814934 5815075 -247441508 - L1M2 LINE L1 -4212 2637 2495 225 0 0 0 chr2 5815077 5815102 -247441481 + (TG)n Simple_repeat Simple_repeat 2 26 0 779 161 25 6 chr2 5815102 5815263 -247441320 - L1M2 LINE L1 -4676 2173 2010 203 306 122 10 chr2 5815386 5815484 -247441099 + MER5B DNA MER1_type 68 176 -2 307 330 27 9 chr2 5815503 5815615 -247440968 - MIR SINE MIR -66 142 29 415 292 23 0 chr2 5816017 5816147 -247440436 - MIR3 SINE MIR -46 162 30 276 307 98 7 chr2 5816288 5816441 -247440142 + MER5A DNA MER1_type 17 183 -6 203 194 75 86 chr2 5816544 5816637 -247439946 - L2 LINE L2 -5 3267 3176 1932 160 16 34 chr2 5816982 5817370 -247439213 + L1MC1 LINE L1 5939 6319 -14 24 32 0 0 chr2 5817401 5817432 -247439151 + AT_rich Low_complexity Low_complexity 1 31 0 1428 209 39 7 chr2 5817436 5817718 -247438865 - AluJb SINE Alu -11 291 1 278 286 118 8 chr2 5818611 5818730 -247437853 - MIR SINE MIR -6 256 125 2324 87 7 10 chr2 5818747 5819047 -247437536 + AluSq SINE Alu 1 299 -14 593 158 44 3 chr2 5819367 5819498 -247437085 - L1MA4 LINE L1 -143 6148 6015 587 214 71 0 chr2 5819499 5819639 -247436944 + L1MA4 LINE L1 6151 6300 0 185 255 163 10 chr2 5821561 5821659 -247434924 + L2 LINE L2 3138 3250 -22 4973 230 19 11 chr2 5823031 5824270 -247432313 + L1M1 LINE L1 480 2407 -5158 840 193 50 15 chr2 5825500 5825771 -247430812 + MER4B-int LTR ERV1 2259 2960 -2362 987 211 45 59 chr2 5825832 5826617 -247429966 + MER4B-int LTR ERV1 1546 2439 -4319 2592 48 3 10 chr2 5827395 5827708 -247428875 + AluY SINE Alu 1 311 0 270 278 43 81 chr2 5828348 5828465 -247428118 - LTR33 LTR ERVL -19 502 395 2330 192 108 27 chr2 5828465 5828935 -247427648 + MLT2B3 LTR ERVL 3 519 -35 477 34 0 0 chr2 5828935 5828994 -247427589 + (TCTA)n Simple_repeat Simple_repeat 2 60 0 2330 192 108 27 chr2 5828994 5829034 -247427549 + MLT2B3 LTR ERVL 519 554 0 270 278 43 81 chr2 5829034 5829125 -247427458 - LTR33 LTR ERVL -126 395 302 2774 13 7 0 chr2 5829363 5829667 -247426916 - AluYa5 SINE Alu -5 306 1 2004 146 27 0 chr2 5829879 5830180 -247426403 - AluSx SINE Alu -2 310 2 185 402 0 0 chr2 5830624 5830726 -247425857 - MIR SINE MIR -113 149 48 521 285 30 36 chr2 5830908 5831073 -247425510 - MLT1H LTR MaLR -269 280 117 4257 225 26 38 chr2 5831173 5831838 -247424745 - L1 LINE L1 -2696 4512 3841 1684 177 20 7 chr2 5831838 5832132 -247424451 - AluSx SINE Alu -14 298 1 4257 225 26 38 chr2 5832132 5833004 -247423579 - L1 LINE L1 -3367 3841 2993 882 140 61 64 chr2 5833004 5833196 -247423387 - THE1B LTR MaLR 0 364 179 3346 209 33 23 chr2 5833297 5834153 -247422430 - L1 LINE L1 -4778 2431 1568 2758 214 78 0 chr2 5834164 5834740 -247421843 - L1 LINE L1 -6405 804 184 21 82 0 0 chr2 5834744 5834793 -247421790 + AT_rich Low_complexity Low_complexity 1 49 0 1161 231 23 13 chr2 5836492 5836791 -247419792 - AluJb SINE Alu 0 302 1 315 0 0 0 chr2 5837227 5837262 -247419321 + (TG)n Simple_repeat Simple_repeat 2 36 0 2046 124 3 3 chr2 5837290 5837588 -247418995 - AluY SINE Alu -13 298 1 506 276 33 28 chr2 5837600 5837611 -247418972 - L1M3c LINE L1 -4846 1119 1110 2234 89 4 0 chr2 5837611 5837892 -247418691 - AluY SINE Alu -29 282 1 506 276 33 28 chr2 5837892 5838094 -247418489 - L1M3c LINE L1 -4855 1110 898 24 67 0 0 chr2 5838152 5838197 -247418386 + AT_rich Low_complexity Low_complexity 1 45 0 1776 165 118 48 chr2 5838337 5838379 -247418204 - MSTA LTR MaLR 0 428 390 2115 143 21 26 chr2 5838379 5838756 -247417827 + THE1C LTR MaLR 1 375 0 1776 165 118 48 chr2 5838756 5839113 -247417470 - MSTA LTR MaLR -38 390 1 2056 172 6 0 chr2 5839114 5839474 -247417109 - MSTA-int LTR MaLR -1 1650 1289 383 188 25 0 chr2 5839474 5839554 -247417029 - MSTA-int LTR MaLR -1523 128 47 182 263 152 10 chr2 5839863 5839962 -247416621 + L2 LINE L2 3138 3250 -22 509 278 76 65 chr2 5843410 5843673 -247412910 - MLT1J LTR MaLR -244 267 2 195 235 0 0 chr2 5844741 5844792 -247411791 + (TG)n Simple_repeat Simple_repeat 2 52 0 342 0 0 0 chr2 5844914 5844952 -247411631 + (CA)n Simple_repeat Simple_repeat 2 39 0 24 0 0 0 chr2 5845888 5845912 -247410671 + AT_rich Low_complexity Low_complexity 1 24 0 186 342 103 8 chr2 5848199 5848316 -247408267 + MIR SINE MIR 122 249 -13 236 281 70 0 chr2 5848503 5848560 -247408023 + MIR SINE MIR 66 126 -82 1698 206 28 0 chr2 5852281 5852737 -247403846 - MLT2B1 LTR ERVL 0 520 1 216 297 16 0 chr2 5853904 5853968 -247402615 - MIR SINE MIR -110 152 88 318 264 29 106 chr2 5855401 5855609 -247400974 + L1MEd LINE L1 332 523 -5596 396 0 0 0 chr2 5856250 5856294 -247400289 + (CA)n Simple_repeat Simple_repeat 2 45 0 228 35 0 0 chr2 5857133 5857162 -247399421 + (ATTG)n Simple_repeat Simple_repeat 4 32 0 2127 101 11 0 chr2 5857163 5857440 -247399143 - AluSp SINE Alu -33 280 1 322 324 72 53 chr2 5859049 5859405 -247397178 - L2 LINE L2 -27 3245 2725 261 273 70 39 chr2 5859692 5859820 -247396763 - L2 LINE L2 -935 2379 2248 679 194 7 0 chr2 5860099 5860243 -247396340 + L1MA9 LINE L1 6166 6310 -2 1762 187 13 7 chr2 5860265 5860575 -247396008 + AluJb SINE Alu 1 312 0 396 292 81 27 chr2 5861666 5861851 -247394732 - MIR SINE MIR -9 253 59 2773 16 0 10 chr2 5862111 5862424 -247394159 + AluYa5 SINE Alu 1 310 -1 1690 214 13 34 chr2 5862685 5863064 -247393519 - MLT1A2 LTR MaLR -2 372 2 611 258 171 15 chr2 5863137 5863401 -247393182 + MLT1G1 LTR MaLR 291 595 0 566 296 74 54 chr2 5864148 5864540 -247392043 + L2 LINE L2 2914 3313 0 237 132 0 0 chr2 5865291 5865329 -247391254 + (TA)n Simple_repeat Simple_repeat 1 38 0 184 293 17 0 chr2 5865805 5865863 -247390720 - MIR SINE MIR -6 256 198 1240 91 0 141 chr2 5866400 5866554 -247390029 + MER30 DNA MER1_type 5 114 -116 1654 42 0 5 chr2 5866554 5866745 -247389838 - L1PA5 LINE L1 0 6154 5965 1240 91 0 141 chr2 5866745 5866832 -247389751 + MER30 DNA MER1_type 114 212 -18 1966 140 42 0 chr2 5866962 5867270 -247389313 + THE1B LTR MaLR 39 359 -5 241 290 165 49 chr2 5868344 5868568 -247388015 - MIR SINE MIR -1 261 12 2038 171 147 5 chr2 5869147 5869556 -247387027 - MLT1C LTR MaLR 0 467 1 1529 227 32 0 chr2 5870135 5870448 -247386135 + MLT1A1 LTR MaLR 1 323 -42 1807 94 11 26 chr2 5870468 5870735 -247385848 - L1PA11 LINE L1 -21 6153 5891 183 80 0 0 chr2 5871803 5871828 -247384755 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 354 293 69 26 chr2 5872706 5872822 -247383761 - MIR SINE MIR -69 139 19 1936 62 8 4 chr2 5874771 5875012 -247381571 - L1PA6 LINE L1 0 6154 5913 1315 253 51 16 chr2 5876549 5876921 -247379662 + MLT1E3 LTR MaLR 147 531 -93 2288 211 52 42 chr2 5877016 5877652 -247378931 - L1MB7 LINE L1 -67 6353 5712 201 208 21 0 chr2 5877723 5877771 -247378812 + (TA)n Simple_repeat Simple_repeat 1 49 0 4941 246 67 19 chr2 5877771 5878411 -247378172 - L1MB7 LINE L1 -874 5508 4900 1906 126 4 11 chr2 5878411 5878702 -247377881 + AluSx SINE Alu 15 303 0 4941 246 67 19 chr2 5878702 5879702 -247376881 - L1MB7 LINE L1 -1482 4900 3789 1056 127 20 0 chr2 5879706 5879856 -247376727 + AluSg/x SINE Alu 121 273 -39 246 32 0 0 chr2 5879857 5879888 -247376695 + (TC)n Simple_repeat Simple_repeat 2 32 0 342 250 0 22 chr2 5879894 5879986 -247376597 - L1MC4 LINE L1 -1339 6703 6614 192 234 0 0 chr2 5879986 5880033 -247376550 + (CATATA)n Simple_repeat Simple_repeat 4 50 0 308 200 31 0 chr2 5880034 5880099 -247376484 - L1MC4 LINE L1 -1339 6703 6637 464 256 241 0 chr2 5880213 5880529 -247376054 - L1MB7 LINE L1 -2875 3507 3116 550 86 32 0 chr2 5880633 5880726 -247375857 + CT-rich Low_complexity Low_complexity 1 96 0 1530 179 58 14 chr2 5880737 5881028 -247375555 - AluJo SINE Alu -8 304 1 524 218 19 58 chr2 5881035 5881241 -247375342 - L1MB7 LINE L1 -4181 2203 2006 496 349 20 49 chr2 5881419 5881778 -247374805 + L2 LINE L2 2658 3005 -308 1999 212 26 64 chr2 5881813 5882358 -247374225 + MLT2B3 LTR ERVL 1 406 -38 256 103 0 77 chr2 5882358 5882436 -247374147 + (TA)n Simple_repeat Simple_repeat 2 73 0 267 117 67 117 chr2 5882444 5882504 -247374079 + MLT2A2 LTR ERVL 399 453 0 459 287 90 27 chr2 5882514 5882737 -247373846 + L2 LINE L2 3074 3310 -3 589 286 0 19 chr2 5883714 5883875 -247372708 + MIR SINE MIR 105 262 0 286 238 157 70 chr2 5884435 5884493 -247372090 + L2 LINE L2 2573 2625 -689 2491 114 117 8 chr2 5884493 5884879 -247371704 + MSTA LTR MaLR 1 428 0 286 238 157 70 chr2 5884879 5884992 -247371591 + L2 LINE L2 2625 2759 -555 211 287 171 16 chr2 5885133 5885262 -247371321 + L2 LINE L2 2995 3143 -170 543 198 185 25 chr2 5885299 5885456 -247371127 - MER4C LTR ERV1 0 465 284 2327 91 3 78 chr2 5885504 5885890 -247370693 - MER4A LTR ERV1 -307 357 1 1903 104 20 30 chr2 5886134 5886431 -247370152 + AluSq SINE Alu 5 298 -15 613 339 39 9 chr2 5886431 5886661 -247369922 + MIR SINE MIR 22 258 -4 1845 204 45 60 chr2 5887324 5887794 -247368789 + MLT1C LTR MaLR 4 466 -1 21 0 0 0 chr2 5888304 5888325 -247368258 + AT_rich Low_complexity Low_complexity 1 21 0 695 175 104 27 chr2 5890457 5890640 -247365943 + MLT1F LTR MaLR 1 197 -370 286 229 16 0 chr2 5890669 5890791 -247365792 + CT-rich Low_complexity Low_complexity 1 124 0 702 212 275 0 chr2 5890824 5891060 -247365523 + MLT1F LTR MaLR 240 540 -2 243 236 0 42 chr2 5891852 5891924 -247364659 + MLT1F1 LTR MaLR 499 567 0 212 302 0 0 chr2 5892254 5892307 -247364276 - L2 LINE L2 -2 3270 3218 669 226 40 40 chr2 5892552 5892701 -247363882 + MER45A DNA AcHobo 2 153 -1428 1844 179 82 9 chr2 5892701 5893041 -247363542 + MLT1A1 LTR MaLR 1 365 0 669 226 40 40 chr2 5893041 5893068 -247363515 + MER45A DNA AcHobo 152 178 0 377 323 31 69 chr2 5893143 5893403 -247363180 - LTR16A1 LTR ERVL -10 447 198 2439 172 31 14 chr2 5893484 5893908 -247362675 + MSTB1 LTR MaLR 1 431 -1 223 367 0 20 chr2 5894620 5894718 -247361865 - L2 LINE L2 -56 3257 3162 196 348 63 25 chr2 5894824 5894982 -247361601 - L2 LINE L2 -472 2842 2679 182 300 43 0 chr2 5895017 5895087 -247361496 + MIR3 SINE MIR 129 201 -7 832 221 77 10 chr2 5895145 5895340 -247361243 + MER20 DNA MER1_type 12 219 0 284 279 65 58 chr2 5897277 5897431 -247359152 + MER104 DNA Tc2 25 179 -1 33 56 0 0 chr2 5897562 5897616 -247358967 + AT_rich Low_complexity Low_complexity 1 54 0 291 250 78 43 chr2 5897886 5898002 -247358581 - MIR3 SINE MIR -54 154 35 227 305 52 45 chr2 5898758 5898912 -247357671 - MIR SINE MIR -42 220 66 673 318 27 12 chr2 5899304 5899562 -247357021 + MIR SINE MIR 1 262 0 241 391 65 0 chr2 5899750 5899888 -247356695 - L2 LINE L2 -3 3269 3123 23 0 0 0 chr2 5900549 5900572 -247356011 + AT_rich Low_complexity Low_complexity 1 23 0 209 174 0 43 chr2 5900679 5900725 -247355858 + (TGAA)n Simple_repeat Simple_repeat 1 44 0 358 336 141 0 chr2 5901650 5901799 -247354784 + MIR SINE MIR 80 249 -13 180 0 0 0 chr2 5902585 5902605 -247353978 + (TTTTTG)n Simple_repeat Simple_repeat 3 22 0 267 374 32 0 chr2 5903732 5903855 -247352728 - MIR SINE MIR -77 185 59 353 206 16 0 chr2 5903922 5903985 -247352598 - L1MC4 LINE L1 -1147 6895 6832 209 308 96 48 chr2 5904461 5904565 -247352018 - MIR SINE MIR -61 147 39 2805 115 0 6 chr2 5904900 5905266 -247351317 + THE1B LTR MaLR 1 364 0 285 328 34 62 chr2 5905276 5905453 -247351130 + HAL1 LINE L1 36 207 -2300 2288 90 0 34 chr2 5905848 5906170 -247350413 + AluY SINE Alu 1 311 0 8941 237 29 37 chr2 5906617 5912182 -247344401 + L1PA13 LINE L1 10 4998 -2586 1383 206 0 0 chr2 5912172 5912454 -247344129 + L1P LINE L1 4933 5214 -932 * 9526 183 10 16 chr2 5912455 5915010 -247341573 + L1PA13 LINE L1 5016 7601 0 293 265 0 0 chr2 5915358 5915426 -247341157 - MER58 DNA MER1_type 0 2420 2353 228 389 0 0 chr2 5915418 5915531 -247341052 - MER58 DNA MER1_type -2139 281 169 * 212 75 0 50 chr2 5918297 5918337 -247338246 + (GGGA)n Simple_repeat Simple_repeat 1 38 0 398 364 57 43 chr2 5919234 5919674 -247336909 + L3 LINE CR1 222 667 -910 3944 128 67 38 chr2 5920702 5921392 -247335191 - L1MA9 LINE L1 0 6312 5603 2232 190 21 73 chr2 5921508 5922356 -247334227 - L1MA9 LINE L1 -682 5630 4813 607 322 0 14 chr2 5922358 5922569 -247334014 + MIR SINE MIR 45 252 -10 259 274 0 0 chr2 5922657 5922719 -247333864 - MIR SINE MIR -17 245 184 241 222 19 0 chr2 5922805 5922859 -247333724 + (TTA)n Simple_repeat Simple_repeat 1 55 0 846 156 7 0 chr2 5923248 5923389 -247333194 + L1MA8 LINE L1 6145 6286 -5 266 288 196 18 chr2 5924278 5924441 -247332142 - MIR SINE MIR -66 196 5 309 285 199 8 chr2 5924445 5924601 -247331982 - MIR3 SINE MIR -16 192 2 203 269 58 0 chr2 5927215 5927267 -247329316 + MIR SINE MIR 94 148 -60 206 252 19 68 chr2 5927537 5927640 -247328943 - MIR SINE MIR -51 211 114 311 270 61 86 chr2 5930219 5930382 -247326201 + MIR SINE MIR 34 192 -70 23 0 0 0 chr2 5930451 5930474 -247326109 + AT_rich Low_complexity Low_complexity 1 23 0 757 229 24 7 chr2 5930807 5931029 -247325554 - MLT1A2 LTR MaLR -2 386 154 610 287 56 15 chr2 5931055 5931250 -247325333 - MLT1A2 LTR MaLR -171 203 1 22 0 0 0 chr2 5932017 5932039 -247324544 + AT_rich Low_complexity Low_complexity 1 22 0 240 247 0 0 chr2 5932157 5932242 -247324341 + CT-rich Low_complexity Low_complexity 2 86 0 1611 78 10 5 chr2 5932917 5933149 -247323434 + AluSg/x SINE Alu 78 310 0 249 274 108 49 chr2 5935171 5935273 -247321310 - MIR SINE MIR -75 133 26 183 248 69 79 chr2 5936528 5936629 -247319954 + L3 LINE CR1 837 936 -641 1344 226 30 39 chr2 5939448 5939873 -247316710 - L1MD3 LINE L1 0 8042 7634 2172 95 3 0 chr2 5941267 5941586 -247314997 - AluSx SINE Alu 0 320 1 385 355 48 35 chr2 5944036 5944267 -247312316 - L2 LINE L2 -188 3084 2851 219 267 33 0 chr2 5944359 5944419 -247312164 - L2 LINE L2 -22 3291 3230 705 213 37 84 chr2 5944655 5945192 -247311391 + L1MC4 LINE L1 7373 8036 -6 2010 57 0 4 chr2 5945478 5945723 -247310860 + AluY SINE Alu 1 244 -67 221 365 25 45 chr2 5947146 5947346 -247309237 + MIR SINE MIR 53 248 -14 2371 226 32 12 chr2 5948064 5948168 -247308415 - L1MA9 LINE L1 -39 6273 6173 198 71 0 0 chr2 5948168 5948196 -247308387 + (TG)n Simple_repeat Simple_repeat 1 28 0 2371 226 32 12 chr2 5948196 5948653 -247307930 - L1MA9 LINE L1 -139 6173 5701 247 284 75 0 chr2 5948840 5948907 -247307676 - L2 LINE L2 -1 3271 3200 327 189 0 14 chr2 5949386 5949460 -247307123 - L1ME2 LINE L1 -15 6149 6077 * 436 259 186 14 chr2 5949458 5949678 -247306905 - L1M4 LINE L1 -1020 5126 4869 2191 89 4 0 chr2 5950849 5951168 -247305415 - AluY SINE Alu 0 320 1 3026 135 41 2 chr2 5952141 5952609 -247303974 + LTR19A LTR ERV1 1 486 0 188 353 67 34 chr2 5953529 5953648 -247302935 + MIR3 SINE MIR 3 125 -83 1848 154 0 3 chr2 5953838 5954131 -247302452 + AluSg SINE Alu 9 300 -10 180 0 0 0 chr2 5954555 5954575 -247302008 + (TAA)n Simple_repeat Simple_repeat 2 21 0 1764 180 49 27 chr2 5955337 5955704 -247300879 - THE1C LTR MaLR 0 375 1 2837 207 28 5 chr2 5956164 5956743 -247299840 + MER6A DNA MER2_type 1 592 -13 236 208 112 80 chr2 5956800 5956925 -247299658 - MIR SINE MIR -69 193 65 234 298 165 8 chr2 5958184 5958305 -247298278 - MLT1J2 LTR MaLR -24 426 287 10228 155 48 10 chr2 5958618 5960411 -247296172 - Tigger2 DNA MER2_type -3 2715 854 204 263 0 0 chr2 5960413 5960489 -247296094 + (TA)n Simple_repeat Simple_repeat 2 77 0 264 202 60 0 chr2 5960620 5960704 -247295879 + (TA)n Simple_repeat Simple_repeat 2 90 0 217 224 0 17 chr2 5960699 5960757 -247295826 + GA-rich Low_complexity Low_complexity 2 58 0 * 237 297 36 18 chr2 5961097 5961262 -247295321 + L1MC/D LINE L1 5292 5459 -900 21 36 0 0 chr2 5961730 5961758 -247294825 + AT_rich Low_complexity Low_complexity 1 28 0 253 262 0 0 chr2 5961858 5961919 -247294664 + GA-rich Low_complexity Low_complexity 2 62 0 581 262 16 49 chr2 5961920 5962164 -247294419 + HAL1b LINE L1 345 580 -768 21 71 0 0 chr2 5962181 5962223 -247294360 + AT_rich Low_complexity Low_complexity 1 42 0 227 283 30 10 chr2 5962284 5962383 -247294200 + HAL1b LINE L1 444 544 -804 558 284 95 46 chr2 5962404 5962731 -247293852 + HAL1b LINE L1 613 955 -393 4316 111 16 17 chr2 5962788 5963479 -247293104 - L1PB1 LINE L1 0 6151 5462 263 197 30 15 chr2 5963592 5963658 -247292925 - L1PB1 LINE L1 -804 5350 5284 11139 211 37 40 chr2 5963828 5966036 -247290547 - L1PB1 LINE L1 -215 6652 4440 2233 102 0 7 chr2 5966036 5966331 -247290252 - AluSc SINE Alu -16 293 1 11139 211 37 40 chr2 5966331 5966817 -247289766 - L1PB1 LINE L1 -2427 4440 3954 1720 77 0 14 chr2 5966817 5967037 -247289546 + AluY SINE Alu 80 296 -15 11139 211 37 40 chr2 5967037 5969093 -247287490 - L1PB1 LINE L1 -2913 3954 1932 1413 216 63 23 chr2 5969109 5969457 -247287126 - LTR10A LTR ERV1 -67 542 181 4014 123 22 14 chr2 5969590 5970749 -247285834 - L1PBa LINE L1 -4926 1937 625 1061 174 15 0 chr2 5970741 5970936 -247285647 - L1PBa LINE L1 -6663 200 3 * 933 127 8 0 chr2 5971285 5971419 -247285164 - AluSg/x SINE Alu -14 298 164 1840 135 46 0 chr2 5971603 5971913 -247284670 + AluSx SINE Alu 1 312 0 254 319 21 14 chr2 5973879 5974020 -247282563 + L1MA9 LINE L1 6133 6274 -38 189 159 0 114 chr2 5974043 5974087 -247282496 + L2 LINE L2 3223 3261 -11 468 0 0 0 chr2 5975185 5975237 -247281346 + (CA)n Simple_repeat Simple_repeat 2 53 0 367 257 62 49 chr2 5975291 5975435 -247281148 - MIR SINE MIR -56 206 61 229 235 37 26 chr2 5975534 5975674 -247280909 + L2 LINE L2 3116 3310 -3 405 281 125 66 chr2 5976395 5976804 -247279779 + MLT1H LTR MaLR 115 547 -2 226 316 22 81 chr2 5977305 5977441 -247279142 + MIR SINE MIR 19 146 -116 361 318 78 7 chr2 5979563 5979717 -247276866 + MIR SINE MIR 87 251 -11 21 71 0 0 chr2 5982808 5982850 -247273733 + AT_rich Low_complexity Low_complexity 1 42 0 1072 187 75 85 chr2 5983047 5983422 -247273161 + THE1C LTR MaLR 5 375 0 440 214 94 0 chr2 5983422 5983539 -247273044 + THE1C-int LTR MaLR 1 128 -1523 1936 150 6 0 chr2 5983539 5983853 -247272730 + THE1C-int LTR MaLR 1289 1604 -47 773 150 101 97 chr2 5983966 5984130 -247272453 + MSTA LTR MaLR 221 388 -40 2089 141 21 26 chr2 5984130 5984507 -247272076 - THE1C LTR MaLR 0 375 1 773 150 101 97 chr2 5984507 5984549 -247272034 + MSTA LTR MaLR 388 428 0 343 274 32 48 chr2 5984614 5984738 -247271845 + L1M4 LINE L1 5032 5153 -993 1563 236 48 21 chr2 5984792 5984994 -247271589 + L1M3c LINE L1 1262 1457 -5014 2459 73 3 0 chr2 5984994 5985297 -247271286 + AluY SINE Alu 1 304 -7 1563 236 48 21 chr2 5985297 5985675 -247270908 + L1M3c LINE L1 1457 1955 -4516 193 252 30 8 chr2 5985684 5985815 -247270768 + (TA)n Simple_repeat Simple_repeat 1 134 0 2960 257 65 40 chr2 5985850 5988261 -247268322 + L1M4c LINE L1 1442 3955 -2427 2367 196 41 53 chr2 5988328 5988530 -247268053 + L1MC3 LINE L1 7187 7390 -395 4913 45 0 0 chr2 5988530 5989126 -247267457 + L1PA5 LINE L1 5556 6151 -3 297 0 0 0 chr2 5989136 5989169 -247267414 + (TAAA)n Simple_repeat Simple_repeat 2 34 0 2367 196 41 53 chr2 5989169 5989561 -247267022 + L1MC3 LINE L1 7399 7785 0 520 209 8 29 chr2 5990088 5990303 -247266280 + CT-rich Low_complexity Low_complexity 1 382 -23 1117 40 34 17 chr2 5990303 5990478 -247266105 + (TTTC)n Simple_repeat Simple_repeat 2 179 0 520 209 8 29 chr2 5990478 5990502 -247266081 + CT-rich Low_complexity Low_complexity 382 405 0 783 196 21 11 chr2 5990636 5990825 -247265758 + L1MA3 LINE L1 6114 6304 -1 183 129 0 0 chr2 5990830 5990861 -247265722 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 2029 116 39 0 chr2 5991008 5991292 -247265291 + AluSq SINE Alu 1 295 -18 1748 194 39 19 chr2 5992614 5993072 -247263511 - MLT2B1 LTR ERVL -2 513 1 21 0 0 0 chr2 5993798 5993819 -247262764 + AT_rich Low_complexity Low_complexity 1 21 0 366 239 84 42 chr2 5993985 5994127 -247262456 - MLT1J2 LTR MaLR -19 431 284 457 266 24 16 chr2 5994249 5994373 -247262210 + MER94 DNA DNA 1 125 -9 317 281 45 19 chr2 5994378 5994512 -247262071 - MLT1J2 LTR MaLR -304 142 6 295 282 113 81 chr2 5994607 5994855 -247261728 - MIR SINE MIR -6 256 1 233 293 53 67 chr2 5994979 5995129 -247261454 - L2 LINE L2 -55 3258 3111 226 309 59 0 chr2 5995725 5995793 -247260790 + MIR SINE MIR 90 161 -101 274 338 120 15 chr2 5995831 5995964 -247260619 - MIR SINE MIR -67 195 49 2265 97 3 7 chr2 5996051 5996350 -247260233 + AluY SINE Alu 1 298 -13 624 191 43 0 chr2 5996522 5996637 -247259946 + FLAM_C SINE Alu 14 133 -10 1446 201 35 6 chr2 5996638 5996981 -247259602 + L1MA8 LINE L1 5938 6290 -1 390 308 84 42 chr2 5997140 5997497 -247259086 + L1ME4a LINE L1 5748 6119 -2 231 133 0 0 chr2 5998213 5998258 -247258325 + (CA)n Simple_repeat Simple_repeat 2 46 0 1663 115 70 0 chr2 5998295 5998582 -247258001 + L1MA8 LINE L1 5980 6286 -5 33 0 0 0 chr2 5999801 5999834 -247256749 + AT_rich Low_complexity Low_complexity 1 33 0 206 203 0 17 chr2 5999888 5999947 -247256636 + GA-rich Low_complexity Low_complexity 1 58 0 931 153 71 6 chr2 6000321 6000491 -247256092 + MLT1A1 LTR MaLR 185 365 0 245 269 76 50 chr2 6000574 6000693 -247255890 + MLT1K LTR MaLR 407 528 -60 5395 129 18 3 chr2 6001082 6001968 -247254615 + L1PB1 LINE L1 4898 5806 -345 261 0 0 0 chr2 6001968 6001997 -247254586 + (TA)n Simple_repeat Simple_repeat 2 30 0 5395 129 18 3 chr2 6001997 6002346 -247254237 + L1PB1 LINE L1 5806 6148 -3 350 226 0 36 chr2 6002400 6002484 -247254099 + MIR SINE MIR 182 262 0 214 300 14 14 chr2 6003049 6003119 -247253464 + CT-rich Low_complexity Low_complexity 2 71 0 2579 87 8 46 chr2 6003137 6003527 -247253056 + THE1C LTR MaLR 1 375 0 1027 307 19 5 chr2 6003741 6004112 -247252471 + L1MEc LINE L1 308 683 -5713 1567 207 79 58 chr2 6004113 6004758 -247251825 + L1M1 LINE L1 4639 5269 -930 1954 147 0 28 chr2 6004758 6005078 -247251505 + AluSx SINE Alu 1 311 -1 189 0 0 0 chr2 6005078 6005099 -247251484 + (TA)n Simple_repeat Simple_repeat 1 21 0 261 0 0 0 chr2 6005098 6005127 -247251456 + (CA)n Simple_repeat Simple_repeat 2 30 0 1567 207 79 58 chr2 6005099 6005292 -247251291 + L1M1 LINE L1 5268 5461 -738 29 0 0 0 chr2 6005386 6005415 -247251168 + AT_rich Low_complexity Low_complexity 1 29 0 1710 194 108 14 chr2 6005463 6005881 -247250702 + MSTB2 LTR MaLR 1 457 0 456 271 25 88 chr2 6006021 6006261 -247250322 - L1ME1 LINE L1 -47 6119 5895 * 934 271 41 39 chr2 6006254 6006689 -247249894 - L1ME1 LINE L1 -160 6006 5571 417 278 82 64 chr2 6006905 6007549 -247249034 - L1MEd LINE L1 -4870 1249 594 298 20 82 20 chr2 6007748 6007797 -247248786 - MLT2A1 LTR ERVL 0 444 393 * 326 58 19 19 chr2 6007783 6007835 -247248748 + MLT2A2 LTR ERVL 400 451 -2 249 650 0 13 chr2 6007864 6008021 -247248562 + (TA)n Simple_repeat Simple_repeat 1 155 0 387 54 0 18 chr2 6008021 6008077 -247248506 + MLT2A2 LTR ERVL 399 453 0 222 37 0 0 chr2 6008208 6008235 -247248348 + (TA)n Simple_repeat Simple_repeat 2 28 0 2663 87 34 8 chr2 6008235 6008615 -247247968 - MLT2A1 LTR ERVL -54 390 1 366 297 79 42 chr2 6009029 6009194 -247247389 + MIR3 SINE MIR 28 198 -10 267 263 22 0 chr2 6009818 6009891 -247246692 - MIR SINE MIR -87 121 45 823 268 166 13 chr2 6010474 6010926 -247245657 - MLT1H LTR MaLR -25 524 4 243 0 0 0 chr2 6011466 6011493 -247245090 + (T)n Simple_repeat Simple_repeat 1 27 0 724 209 91 5 chr2 6012209 6012419 -247244164 - L1MB8 LINE L1 -6 6172 5945 410 214 11 22 chr2 6013687 6013865 -247242718 + (CA)n Simple_repeat Simple_repeat 1 176 0 437 206 11 22 chr2 6013911 6014091 -247242492 + (CA)n Simple_repeat Simple_repeat 1 178 0 451 228 19 6 chr2 6014144 6014461 -247242122 + (CA)n Simple_repeat Simple_repeat 1 321 0 358 341 36 14 chr2 6014785 6015061 -247241522 + Charlie7 DNA MER1_type 1 282 -2330 1494 139 12 0 chr2 6015084 6015336 -247241247 - Tigger5 DNA MER2_type -7 2316 2062 423 312 24 5 chr2 6015419 6015624 -247240959 + Charlie7 DNA MER1_type 334 542 -2070 1246 252 72 42 chr2 6015664 6016276 -247240307 + Charlie7 DNA MER1_type 1720 2349 -263 328 227 100 0 chr2 6016542 6016652 -247239931 + MER58B DNA MER1_type 221 341 0 2201 103 3 17 chr2 6017653 6017953 -247238630 - AluSg SINE Alu -14 296 1 1635 173 0 11 chr2 6018052 6018318 -247238265 - AluJb SINE Alu -49 263 1 633 291 12 36 chr2 6019252 6019503 -247237080 - MIR SINE MIR -6 256 12 183 306 0 0 chr2 6019866 6019915 -247236668 + L2 LINE L2 3265 3313 0 237 196 0 0 chr2 6020326 6020382 -247236201 + (TG)n Simple_repeat Simple_repeat 2 57 0 200 118 29 0 chr2 6020390 6020424 -247236159 + (TATG)n Simple_repeat Simple_repeat 4 38 0 735 120 0 0 chr2 6020761 6020869 -247235714 + L1MA3 LINE L1 6196 6303 -2 22 0 0 0 chr2 6020901 6020923 -247235660 + AT_rich Low_complexity Low_complexity 1 22 0 298 244 103 0 chr2 6021246 6021324 -247235259 + L2 LINE L2 3170 3255 -17 1355 184 164 109 chr2 6022465 6023171 -247233412 + LTR1B LTR ERV1 1 745 -81 389 287 9 0 chr2 6023254 6023369 -247233214 + LTR28 LTR ERV1 905 1020 0 259 272 0 65 chr2 6023617 6023709 -247232874 + MER5A DNA MER1_type 54 139 -50 2219 129 0 3 chr2 6023714 6024023 -247232560 - AluSq SINE Alu -3 310 3 23 0 0 0 chr2 6024028 6024051 -247232532 + AT_rich Low_complexity Low_complexity 1 23 0 608 98 10 49 chr2 6024495 6024597 -247231986 + MER4A LTR ERV1 1 98 -566 1543 150 3 77 chr2 6024597 6024970 -247231613 + MER4A LTR ERV1 261 664 0 1821 122 0 0 chr2 6025377 6025615 -247230968 - AluSx SINE Alu -74 238 1 188 304 0 18 chr2 6025820 6025876 -247230707 + L2 LINE L2 3235 3289 -24 199 61 61 0 chr2 6027964 6027997 -247228586 + A-rich Low_complexity Low_complexity 3 37 0 237 222 0 0 chr2 6028310 6028373 -247228210 + L1ME4a LINE L1 5099 5161 -985 7007 45 19 0 chr2 6028386 6029841 -247226742 + L1PA6 LINE L1 4682 6154 0 297 243 21 15 chr2 6029896 6030003 -247226580 + L1ME4a LINE L1 5157 5269 -877 369 0 0 0 chr2 6030003 6030044 -247226539 + (CA)n Simple_repeat Simple_repeat 2 42 0 297 243 21 15 chr2 6030044 6030071 -247226512 + L1ME4a LINE L1 5269 5294 -852 350 277 62 112 chr2 6030391 6030748 -247225835 + L1ME4a LINE L1 5782 6120 -1 180 284 119 18 chr2 6031907 6032016 -247224567 + MIR SINE MIR 23 142 -66 182 313 45 15 chr2 6033316 6033383 -247223200 + MIR SINE MIR 105 173 -89 385 312 82 12 chr2 6033436 6033606 -247222977 - L2 LINE L2 -15 3298 3117 264 234 16 0 chr2 6033776 6033840 -247222743 + L2 LINE L2 2723 2787 -527 487 302 94 5 chr2 6034915 6035107 -247221476 + MIR SINE MIR 48 256 -6 1107 81 0 27 chr2 6035397 6035514 -247221069 + (TTTC)n Simple_repeat Simple_repeat 1 293 0 1107 81 0 27 chr2 6035514 6035699 -247220884 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 237 297 113 66 chr2 6036056 6036268 -247220315 - MIR SINE MIR -7 255 34 263 353 17 17 chr2 6036503 6036622 -247219961 + MIR SINE MIR 37 155 -107 478 308 0 0 chr2 6037245 6037365 -247219218 - HERVL LTR ERVL -1432 4222 4103 191 298 106 0 chr2 6038149 6038243 -247218340 - L3b LINE CR1 -253 1330 1227 2136 154 0 0 chr2 6038499 6038810 -247217773 + AluSx SINE Alu 1 311 -1 278 167 302 0 chr2 6089136 6089232 -247167351 - L1ME3A LINE L1 0 6170 6046 435 19 0 0 chr2 6089323 6089375 -247167208 + (TG)n Simple_repeat Simple_repeat 2 53 0 272 229 73 9 chr2 6089567 6089676 -247166907 - L1M4 LINE L1 -1932 4214 4099 3124 231 41 24 chr2 6089685 6091218 -247165365 + L1MB7 LINE L1 4623 6179 -5 408 125 42 0 chr2 6091218 6091290 -247165293 + AluS SINE Alu 1 75 -228 854 188 0 6 chr2 6092085 6092266 -247164317 + (CA)n Simple_repeat Simple_repeat 1 180 0 275 226 259 25 chr2 6093221 6093460 -247163123 - LTR50 LTR ERVL -4 791 497 347 259 54 60 chr2 6093596 6093762 -247162821 - LTR50 LTR ERVL -615 180 16 186 315 96 55 chr2 6094090 6094236 -247162347 - L2 LINE L2 -48 3224 3073 234 81 0 0 chr2 6094318 6094355 -247162228 + (T)n Simple_repeat Simple_repeat 1 37 0 196 328 118 0 chr2 6094776 6094895 -247161688 - MIR3 SINE MIR -43 165 33 2331 103 3 0 chr2 6095517 6095829 -247160754 - AluSq SINE Alu 0 313 1 292 321 128 66 chr2 6096120 6096543 -247160040 + L2 LINE L2 2811 3259 -13 239 191 0 29 chr2 6098365 6098373 -247158210 + (TA)n Simple_repeat Simple_repeat 1 8 -58 2362 149 20 43 chr2 6098373 6098816 -247157767 - Tigger2a DNA MER2_type 0 434 2 239 191 0 29 chr2 6098816 6098862 -247157721 + (TA)n Simple_repeat Simple_repeat 8 55 -11 1690 186 54 9 chr2 6098862 6099195 -247157388 + MER7A DNA MER2_type 1 346 0 239 191 0 29 chr2 6099195 6099207 -247157376 + (TA)n Simple_repeat Simple_repeat 55 66 0 388 261 48 38 chr2 6099893 6100126 -247156457 + L1ME LINE L1 5214 5443 -727 11566 154 25 11 chr2 6100232 6102238 -247154345 + Tigger1 DNA MER2_type 1 2034 -384 337 102 0 0 chr2 6102323 6102372 -247154211 + Tigger1 DNA MER2_type 2044 2092 -326 437 78 62 0 chr2 6102373 6102437 -247154146 + Alu SINE Alu 223 290 -21 1765 178 34 0 chr2 6102439 6102765 -247153818 + Tigger1 DNA MER2_type 2080 2416 -2 974 233 57 56 chr2 6103091 6103624 -247152959 - L1PBb LINE L1 -4798 1405 781 186 382 61 23 chr2 6103866 6104128 -247152455 - L2 LINE L2 -991 2323 2052 26 0 0 0 chr2 6104700 6104726 -247151857 + AT_rich Low_complexity Low_complexity 1 26 0 800 178 71 46 chr2 6105257 6105454 -247151129 + MER58A DNA MER1_type 4 205 -19 215 273 80 87 chr2 6105928 6106078 -247150505 - MER5A DNA MER1_type -40 149 1 298 246 56 47 chr2 6108281 6108436 -247148147 + MIR SINE MIR 2 151 -57 640 222 6 35 chr2 6108944 6109137 -247147446 + L1M4 LINE L1 3590 3777 -2369 23 68 0 0 chr2 6109200 6109244 -247147339 + AT_rich Low_complexity Low_complexity 1 44 0 39 50 0 0 chr2 6109326 6109386 -247147197 + AT_rich Low_complexity Low_complexity 1 60 0 259 312 149 7 chr2 6109863 6110004 -247146579 - MER117 DNA MER1_type -35 162 2 2264 109 3 0 chr2 6110403 6110715 -247145868 + AluSp SINE Alu 1 313 0 931 270 48 42 chr2 6111306 6111788 -247144795 - HAL1 LINE L1 -121 2386 1902 418 314 63 20 chr2 6111908 6112303 -247144280 - HAL1 LINE L1 -1045 1462 1051 516 248 51 0 chr2 6112311 6112448 -247144135 - HAL1 LINE L1 -2313 194 51 631 266 77 10 chr2 6113530 6113827 -247142756 + Looper DNA T2_type 1 317 -1241 1174 164 10 0 chr2 6113849 6114057 -247142526 + MER2 DNA MER2_type 2 211 -134 3231 108 15 5 chr2 6114138 6114156 -247142427 - L1PA8A LINE L1 -389 5742 5726 297 0 0 0 chr2 6114156 6114189 -247142394 + (TG)n Simple_repeat Simple_repeat 2 34 0 3231 108 15 5 chr2 6114189 6115058 -247141525 - L1PA8A LINE L1 -405 5726 4848 2625 98 0 10 chr2 6115054 6115443 -247141140 + L1PA8A LINE L1 5719 6103 -28 * 221 30 61 0 chr2 6115449 6115482 -247141101 + A-rich Low_complexity Low_complexity 1 35 0 345 135 58 19 chr2 6115482 6115586 -247140997 + Looper DNA T2_type 1373 1480 -78 2465 55 0 13 chr2 6116070 6116382 -247140201 + AluY SINE Alu 1 308 -3 2262 117 0 3 chr2 6117347 6117656 -247138927 - AluSc SINE Alu -1 308 1 497 297 95 54 chr2 6118616 6119175 -247137408 - L2 LINE L2 -13 3300 2702 1105 107 0 47 chr2 6119184 6119353 -247137230 - AluSg SINE Alu -30 280 120 201 74 0 0 chr2 6119356 6119383 -247137200 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 1033 92 0 0 chr2 6119385 6119516 -247137067 - AluSg SINE Alu -179 131 1 1181 285 203 65 chr2 6119516 6121120 -247135463 - L2 LINE L2 -599 2715 891 881 289 90 18 chr2 6122102 6122603 -247133980 + L1MCc LINE L1 861 1397 -5026 532 300 73 45 chr2 6122607 6123101 -247133482 + L1MCc LINE L1 1406 1913 -5028 231 282 35 0 chr2 6123150 6123324 -247133259 + L1MCc LINE L1 2814 2993 -4129 336 117 36 108 chr2 6123383 6123494 -247133089 - L1MA9 LINE L1 -2 6310 6208 * 871 160 46 16 chr2 6123490 6123637 -247132946 + L1MA9 LINE L1 5632 5788 -524 204 40 0 0 chr2 6123637 6123662 -247132921 + (TG)n Simple_repeat Simple_repeat 2 26 0 871 160 46 16 chr2 6123662 6123708 -247132875 + L1MA9 LINE L1 5788 5831 -481 757 152 25 7 chr2 6123710 6123873 -247132710 + L1MA9 LINE L1 5775 5946 -243 3670 197 92 42 chr2 6124002 6124277 -247132306 + L1MC3 LINE L1 6591 6851 -934 189 0 0 0 chr2 6124277 6124298 -247132285 + (CA)n Simple_repeat Simple_repeat 1 21 0 3670 197 92 42 chr2 6124298 6124319 -247132264 + L1MC3 LINE L1 6851 6869 -916 3169 148 25 17 chr2 6124319 6124841 -247131742 + MER1A DNA MER1_type 2 527 0 3670 197 92 42 chr2 6124841 6125681 -247130902 + L1MC3 LINE L1 6869 7785 0 1667 260 59 47 chr2 6125700 6126744 -247129839 + L1MCc LINE L1 3167 4223 -2718 332 319 17 9 chr2 6126956 6127072 -247129511 - MIR3 SINE MIR -18 190 74 500 160 15 15 chr2 6127166 6127297 -247129286 + CT-rich Low_complexity Low_complexity 1 131 0 2288 109 3 0 chr2 6128616 6128928 -247127655 - AluSp SINE Alu 0 313 1 342 224 14 46 chr2 6129682 6130037 -247126546 + GA-rich Low_complexity Low_complexity 1 343 0 677 186 30 9 chr2 6130054 6130392 -247126191 + GA-rich Low_complexity Low_complexity 1 345 0 21 36 0 0 chr2 6131393 6131421 -247125162 + AT_rich Low_complexity Low_complexity 1 28 0 2253 104 3 0 chr2 6131484 6131781 -247124802 + AluSx SINE Alu 1 298 -14 267 327 65 42 chr2 6131983 6132151 -247124432 - MER5A DNA MER1_type -1 188 17 329 336 50 0 chr2 6132406 6132525 -247124058 + MIR3 SINE MIR 49 173 -35 260 235 20 10 chr2 6133446 6133501 -247123082 + (TA)n Simple_repeat Simple_repeat 1 59 -40 2244 116 0 3 chr2 6133501 6133811 -247122772 - AluSg SINE Alu -1 309 1 260 235 20 10 chr2 6133811 6133853 -247122730 + (TA)n Simple_repeat Simple_repeat 59 99 0 193 200 30 140 chr2 6134046 6134146 -247122437 + L2 LINE L2 2994 3082 -190 392 335 90 75 chr2 6134319 6134775 -247121808 - L2 LINE L2 0 3313 2851 810 330 216 19 chr2 6135002 6136154 -247120429 - L2 LINE L2 -1027 2287 791 541 195 81 0 chr2 6136154 6136277 -247120306 + FLAM_A SINE Alu 1 133 0 810 330 216 19 chr2 6136277 6136572 -247120011 - L2 LINE L2 -2523 791 555 25 0 0 0 chr2 6136618 6136643 -247119940 + AT_rich Low_complexity Low_complexity 1 25 0 2488 64 0 0 chr2 6136743 6137041 -247119542 + AluY SINE Alu 1 298 -13 316 360 39 39 chr2 6137345 6137603 -247118980 - L2 LINE L2 -189 3083 2826 302 280 16 40 chr2 6139063 6139188 -247117395 - L1ME3A LINE L1 -3 6167 6046 2002 163 7 0 chr2 6139378 6139684 -247116899 - AluSx SINE Alu -4 308 1 4422 154 54 71 chr2 6140045 6141134 -247115449 + MER11C LTR ERVK 1 1071 0 1278 200 71 26 chr2 6141517 6141894 -247114689 - L1MC2 LINE L1 -2 7772 6148 1115 134 41 0 chr2 6141898 6142069 -247114514 - AluSg/x SINE Alu -1 311 134 2256 110 3 0 chr2 6142069 6142361 -247114222 - AluSp SINE Alu -15 298 6 3627 181 63 94 chr2 6142361 6143496 -247113087 - L1MC3 LINE L1 -380 7405 6306 256 325 144 8 chr2 6143796 6143931 -247112652 + MIR SINE MIR 11 159 -57 1520 178 90 26 chr2 6143946 6144289 -247112294 - MLT1A1 LTR MaLR 0 365 1 183 205 0 0 chr2 6145709 6145748 -247110835 + T-rich Low_complexity Low_complexity 1 39 0 854 190 13 0 chr2 6146193 6146351 -247110232 + FRAM SINE Alu 1 160 -6 219 241 35 58 chr2 6146506 6146593 -247109990 + MIR SINE MIR 56 140 -122 307 262 71 0 chr2 6146698 6146782 -247109801 - L1MC4 LINE L1 -1339 6703 6614 * 310 256 49 0 chr2 6146733 6146815 -247109768 + L1MC4 LINE L1 6617 6702 -1340 225 218 23 23 chr2 6146819 6146906 -247109677 - L1MC4 LINE L1 -1342 6700 6614 237 139 0 0 chr2 6146909 6146952 -247109631 + (TA)n Simple_repeat Simple_repeat 1 43 0 186 269 60 45 chr2 6147199 6147266 -247109317 + L2 LINE L2 3246 3313 0 269 186 14 0 chr2 6148030 6148100 -247108483 + (CATA)n Simple_repeat Simple_repeat 2 72 0 29 28 0 0 chr2 6148203 6148239 -247108344 + AT_rich Low_complexity Low_complexity 1 36 0 484 139 0 0 chr2 6148428 6148500 -247108083 + AluS SINE Alu 228 299 -13 199 354 101 69 chr2 6148772 6149238 -247107345 - L2 LINE L2 -2417 897 417 216 111 0 0 chr2 6149834 6149870 -247106713 + (CA)n Simple_repeat Simple_repeat 1 36 0 189 0 0 0 chr2 6149885 6149906 -247106677 + (CCA)n Simple_repeat Simple_repeat 1 21 0 1202 248 103 7 chr2 6150053 6150469 -247106114 + MLT1C LTR MaLR 6 461 -6 234 305 184 29 chr2 6151282 6151456 -247105127 + MIR SINE MIR 1 201 -61 735 282 53 18 chr2 6152358 6152585 -247103998 - MIR SINE MIR -13 249 15 1272 208 0 4 chr2 6153238 6153510 -247103073 - AluJb SINE Alu 0 312 42 251 270 11 45 chr2 6153868 6154046 -247102537 + (ATAAG)n Simple_repeat Simple_repeat 5 176 0 27 29 0 0 chr2 6154585 6154619 -247101964 + AT_rich Low_complexity Low_complexity 1 34 0 235 334 99 60 chr2 6154904 6155257 -247101326 + L2 LINE L2 2906 3272 0 826 263 134 26 chr2 6155764 6156114 -247100469 + MLT1B LTR MaLR 3 390 0 1406 123 53 53 chr2 6157167 6157485 -247099098 - THE1C LTR MaLR -57 318 1 28 29 0 0 chr2 6157525 6157560 -247099023 + AT_rich Low_complexity Low_complexity 1 35 0 197 139 23 0 chr2 6157560 6157603 -247098980 + (CATATA)n Simple_repeat Simple_repeat 3 46 0 209 346 75 9 chr2 6158892 6159021 -247097562 + MIR SINE MIR 20 140 -68 208 356 67 34 chr2 6159165 6159314 -247097269 - MIR SINE MIR -95 167 14 216 280 60 40 chr2 6161062 6161162 -247095421 + MIR SINE MIR 20 121 -141 256 361 69 0 chr2 6161223 6161353 -247095230 - L2 LINE L2 0 3313 3175 238 261 0 0 chr2 6161365 6161411 -247095172 + L2 LINE L2 3209 3254 -18 227 221 174 0 chr2 6161834 6161920 -247094663 - MIR SINE MIR -71 191 91 288 324 15 7 chr2 6161971 6162107 -247094476 - LTR67 LTR ERVL -27 530 394 285 278 11 33 chr2 6163622 6163712 -247092871 + L2 LINE L2 3220 3307 -6 367 308 159 0 chr2 6164379 6164574 -247092009 - MIR SINE MIR -26 236 11 194 316 71 10 chr2 6165470 6165568 -247091015 - MIR SINE MIR -55 153 50 238 344 0 0 chr2 6165782 6165846 -247090737 + MIR SINE MIR 83 146 -62 1565 182 100 9 chr2 6165854 6166183 -247090400 - MLT1A1 LTR MaLR -6 359 1 1185 219 149 10 chr2 6166219 6166520 -247090063 - MER2 DNA MER2_type -1 343 1 21 0 0 0 chr2 6167893 6167914 -247088669 + AT_rich Low_complexity Low_complexity 1 21 0 291 266 21 0 chr2 6167930 6168024 -247088559 + MER3 DNA MER1_type 1 96 -113 1525 246 47 30 chr2 6168030 6168497 -247088086 + L1MA9 LINE L1 5798 6272 -40 300 240 52 10 chr2 6168505 6168601 -247087982 + MER3 DNA MER1_type 99 198 -11 3624 152 0 26 chr2 6168734 6169275 -247087308 + MER1A DNA MER1_type 1 527 0 234 318 106 20 chr2 6169300 6169545 -247087038 + HAL1b LINE L1 306 571 -777 231 226 70 26 chr2 6169607 6169722 -247086861 + HAL1b LINE L1 678 797 -551 30 59 0 0 chr2 6170035 6170086 -247086497 + AT_rich Low_complexity Low_complexity 1 51 0 23 54 0 0 chr2 6170093 6170130 -247086453 + AT_rich Low_complexity Low_complexity 1 37 0 1732 133 42 52 chr2 6170836 6171145 -247085438 + AluSx SINE Alu 1 306 -6 1727 199 21 57 chr2 6171207 6171400 -247085183 + MLT1A2 LTR MaLR 1 175 -199 357 43 0 0 chr2 6171400 6171447 -247085136 + (TC)n Simple_repeat Simple_repeat 2 48 0 1727 199 21 57 chr2 6171447 6171641 -247084942 + MLT1A2 LTR MaLR 175 374 0 306 362 54 0 chr2 6171658 6171807 -247084776 + L1MC4a LINE L1 4736 4892 -1254 1144 312 62 18 chr2 6172201 6172858 -247083725 + L1MC4a LINE L1 5256 5941 -1867 24 32 0 0 chr2 6173050 6173081 -247083502 + AT_rich Low_complexity Low_complexity 1 31 0 229 359 26 0 chr2 6173359 6173437 -247083146 + MIR SINE MIR 2 81 -181 389 261 7 0 chr2 6174482 6174635 -247081948 + (TG)n Simple_repeat Simple_repeat 2 155 0 1828 125 53 11 chr2 6174824 6175105 -247081478 + AluSx SINE Alu 1 293 -19 225 0 0 0 chr2 6175188 6175213 -247081370 + (TC)n Simple_repeat Simple_repeat 2 26 0 184 306 83 9 chr2 6175623 6175731 -247080852 + MIR SINE MIR 23 138 -124 397 282 75 27 chr2 6175758 6175959 -247080624 - MIR SINE MIR -27 235 25 182 239 22 0 chr2 6176133 6176179 -247080404 - L3b LINE CR1 -9 1574 1528 375 343 66 24 chr2 6176504 6176717 -247079866 - MIR SINE MIR -32 230 9 528 122 8 98 chr2 6176915 6177038 -247079545 - L1PB2 LINE L1 -4 6147 6036 296 290 90 80 chr2 6177156 6177312 -247079271 - MIR SINE MIR -2 260 100 1344 202 10 50 chr2 6177312 6177653 -247078930 + AluJb SINE Alu 1 312 0 296 290 90 80 chr2 6177653 6177696 -247078887 - MIR SINE MIR -162 100 59 3822 157 11 5 chr2 6177930 6178542 -247078041 - L1PA15 LINE L1 -2 6163 5548 28 0 0 0 chr2 6178581 6178609 -247077974 + AT_rich Low_complexity Low_complexity 1 28 0 1852 145 78 31 chr2 6179944 6180302 -247076281 + THE1C LTR MaLR 1 375 0 8726 127 115 3 chr2 6180304 6181718 -247074865 + THE1C-int LTR MaLR 3 1575 -5 1772 152 45 73 chr2 6181727 6182109 -247074474 + THE1C LTR MaLR 5 375 0 311 328 101 0 chr2 6182493 6182612 -247073971 - L2 LINE L2 -7 3306 3176 1507 189 10 34 chr2 6182650 6182946 -247073637 - AluJo SINE Alu -23 289 1 500 240 0 0 chr2 6184269 6184369 -247072214 + MER63 DNA MER1_type 27 752 -84 335 241 25 0 chr2 6184370 6184449 -247072134 + MER63 DNA MER1_type 978 1058 -2 481 270 16 0 chr2 6185051 6185177 -247071406 - L3b LINE CR1 -331 1252 1125 217 344 56 38 chr2 6185367 6185414 -247071169 - MIR3 SINE MIR -7 201 156 2504 67 0 3 chr2 6185414 6185726 -247070857 + AluY SINE Alu 1 311 0 217 344 56 38 chr2 6185726 6185838 -247070745 - MIR3 SINE MIR -52 156 39 186 280 54 21 chr2 6185964 6186057 -247070526 + L2 LINE L2 3206 3301 -12 236 62 0 0 chr2 6188565 6188597 -247067986 + HSMAR1 DNA Mariner 3 34 -1253 2294 95 0 20 chr2 6188768 6189073 -247067510 - AluSg SINE Alu -7 303 5 219 88 0 0 chr2 6190587 6190621 -247065962 + (GA)n Simple_repeat Simple_repeat 1 34 0 586 299 88 75 chr2 6190718 6191160 -247065423 + MLT1J2 LTR MaLR 1 448 -2 520 288 73 10 chr2 6191317 6191522 -247065061 - MIR SINE MIR -37 225 8 757 148 26 9 chr2 6191923 6192038 -247064545 + FLAM_C SINE Alu 12 128 -15 205 364 156 0 chr2 6192501 6192655 -247063928 - MIR SINE MIR -12 250 73 303 313 56 17 chr2 6193121 6193300 -247063283 + MIR SINE MIR 54 239 -23 33 43 0 0 chr2 6195392 6195439 -247061144 + AT_rich Low_complexity Low_complexity 1 47 0 2651 149 2 7 chr2 6196962 6197369 -247059214 + MSTA LTR MaLR 1 405 -23 1486 121 36 9 chr2 6197369 6197593 -247058990 - MER30 DNA MER1_type 0 230 1 224 227 0 0 chr2 6197624 6197668 -247058915 + (CATA)n Simple_repeat Simple_repeat 1 44 0 302 298 36 79 chr2 6198559 6198651 -247057932 - L1M4 LINE L1 -3775 2371 2277 2308 104 7 0 chr2 6198651 6198949 -247057634 - AluSp SINE Alu -13 300 1 302 298 36 79 chr2 6198949 6199108 -247057475 - L1M4 LINE L1 -3869 2277 2131 287 164 16 0 chr2 6199601 6199662 -247056921 + (TA)n Simple_repeat Simple_repeat 1 62 0 203 369 8 8 chr2 6203265 6203387 -247053196 + (TG)n Simple_repeat Simple_repeat 1 122 0 302 347 52 6 chr2 6203744 6203917 -247052666 + MIR3 SINE MIR 5 185 -23 516 186 12 0 chr2 6204906 6204992 -247051591 - FLAM_C SINE Alu -36 107 21 344 204 54 21 chr2 6205111 6205204 -247051379 - Charlie7 DNA MER1_type -2455 157 62 2204 109 6 13 chr2 6205390 6205523 -247051060 + AluSg SINE Alu 1 133 -177 2151 104 0 13 chr2 6205523 6205858 -247050725 + AluSx SINE Alu 3 312 0 2204 109 6 13 chr2 6205858 6206035 -247050548 + AluSg SINE Alu 133 309 -1 3109 123 12 6 chr2 6206156 6206637 -247049946 - L1PA13 LINE L1 -415 5746 5263 2736 125 39 2 chr2 6206637 6207033 -247049550 + L1PA13 LINE L1 5739 6160 -3 467 236 51 97 chr2 6207098 6207293 -247049290 - MIR SINE MIR -10 252 67 358 309 86 6 chr2 6207918 6208093 -247048490 + MIR SINE MIR 49 237 -25 185 163 0 82 chr2 6208483 6208532 -247048051 - L3b LINE CR1 -13 1570 1526 1718 212 57 5 chr2 6208671 6209039 -247047544 + MLT1B LTR MaLR 3 389 -1 185 323 83 53 chr2 6209596 6209729 -247046854 + MIR SINE MIR 117 253 -9 511 278 88 32 chr2 6211191 6211407 -247045176 - MIR SINE MIR -21 241 14 205 313 101 10 chr2 6211703 6211802 -247044781 + MIR SINE MIR 40 147 -115 242 379 0 0 chr2 6211947 6212042 -247044541 + MLT1G1 LTR MaLR 431 525 -70 1288 198 62 35 chr2 6212043 6212154 -247044429 + AluJo SINE Alu 4 110 -202 2261 134 19 43 chr2 6212154 6212527 -247044056 - THE1B LTR MaLR 0 364 1 1288 198 62 35 chr2 6212527 6212703 -247043880 + AluJo SINE Alu 110 299 -13 2156 117 19 3 chr2 6212983 6213308 -247043275 - Tigger3b DNA MER2_type -564 667 338 233 87 0 0 chr2 6213323 6213369 -247043214 - LTR66 LTR ERVL -171 439 394 239 211 9 28 chr2 6213377 6213486 -247043097 + (TA)n Simple_repeat Simple_repeat 2 108 0 565 158 0 10 chr2 6213486 6213587 -247042996 - Tigger3b DNA MER2_type -902 329 230 3069 196 59 6 chr2 6214487 6215150 -247041433 - L1MC2 LINE L1 0 6344 5647 21 0 0 0 chr2 6215248 6215269 -247041314 + AT_rich Low_complexity Low_complexity 1 21 0 710 191 111 5 chr2 6215800 6215989 -247040594 + L1MD3 LINE L1 6906 7114 -881 607 235 96 24 chr2 6215994 6216160 -247040423 + MER45A DNA AcHobo 1 178 0 376 323 16 8 chr2 6216172 6216299 -247040284 - MER5A DNA MER1_type -51 138 11 413 309 74 67 chr2 6216649 6217070 -247039513 + L1MEc LINE L1 2099 2500 -3715 1769 181 0 0 chr2 6217070 6217376 -247039207 + AluSx SINE Alu 1 306 0 413 309 74 67 chr2 6217376 6217545 -247039038 + L1MEc LINE L1 2500 2666 -3549 2442 125 43 14 chr2 6218818 6219170 -247037413 - THE1B LTR MaLR 0 364 3 12286 100 11 0 chr2 6219172 6220734 -247035849 - THE1B-int LTR MaLR 0 1580 2 2481 137 31 14 chr2 6220735 6221093 -247035490 - THE1B LTR MaLR 0 364 1 22 56 0 0 chr2 6221099 6221135 -247035448 + AT_rich Low_complexity Low_complexity 1 36 0 1897 146 13 23 chr2 6223098 6223400 -247033183 - AluJo SINE Alu -13 299 1 1981 139 4 0 chr2 6223446 6223766 -247032817 + AluSx SINE Alu 1 321 0 234 116 0 0 chr2 6226099 6226142 -247030441 + (T)n Simple_repeat Simple_repeat 1 43 0 323 275 44 0 chr2 6226441 6226532 -247030051 - MIR SINE MIR -62 146 52 317 301 82 35 chr2 6226759 6227075 -247029508 + L1ME LINE L1 5352 5682 -439 467 295 45 54 chr2 6227189 6227413 -247029170 + MIR SINE MIR 14 235 -27 235 188 104 0 chr2 6227846 6227894 -247028689 + L2 LINE L2 3256 3308 -5 1754 182 3 0 chr2 6227916 6228207 -247028376 + AluJb SINE Alu 12 303 -9 5029 68 0 0 chr2 6228333 6228923 -247027660 + LTR10C LTR ERV1 1 590 -1 1767 132 81 45 chr2 6229137 6229494 -247027089 - THE1C LTR MaLR 0 375 6 2080 120 3 30 chr2 6230023 6230322 -247026261 + AluSx SINE Alu 1 291 -21 10114 245 26 29 chr2 6231375 6231556 -247025027 + L1PA16 LINE L1 1983 2163 -4686 2037 151 3 0 chr2 6231556 6231868 -247024715 + AluSp SINE Alu 1 313 0 10114 245 26 29 chr2 6231868 6233322 -247023261 + L1PA16 LINE L1 2163 3620 -3229 2146 100 10 32 chr2 6233322 6233632 -247022951 + AluSq SINE Alu 1 303 -10 10114 245 26 29 chr2 6233632 6234348 -247022235 + L1PA16 LINE L1 3620 4337 -2512 261 0 0 0 chr2 6234348 6234377 -247022206 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 10114 245 26 29 chr2 6234377 6236188 -247020395 + L1PA16 LINE L1 4337 6033 -816 404 167 14 14 chr2 6236188 6236260 -247020323 + AluJ/FRAM SINE Alu 217 288 -24 23 0 0 0 chr2 6236260 6236283 -247020300 + AT_rich Low_complexity Low_complexity 1 23 0 2560 156 53 3 chr2 6236284 6237021 -247019562 + L1PA16 LINE L1 6025 6849 -20 22 70 0 0 chr2 6237244 6237287 -247019296 + AT_rich Low_complexity Low_complexity 1 43 0 300 346 88 16 chr2 6238506 6238688 -247017895 + L2 LINE L2 3078 3272 0 227 227 0 0 chr2 6239465 6239509 -247017074 - L3 LINE CR1 -7 1570 1527 2232 109 3 0 chr2 6239714 6240007 -247016576 - AluSg SINE Alu -16 294 1 243 281 92 59 chr2 6240047 6240200 -247016383 - MIR3 SINE MIR -48 160 3 626 276 119 16 chr2 6240258 6240501 -247016082 + MLT1J LTR MaLR 1 268 -243 339 65 0 0 chr2 6240680 6240726 -247015857 + (TTTTA)n Simple_repeat Simple_repeat 1 46 0 27671 82 8 5 chr2 6240726 6245313 -247011270 - L1PA6 LINE L1 -24 6130 1532 35016 85 4 12 chr2 6245447 6250374 -247006209 - L1P2 LINE L1 -683 5471 591 1437 228 83 41 chr2 6250614 6251049 -247005534 + MLT1C LTR MaLR 8 460 -7 2054 168 90 30 chr2 6251376 6251776 -247004807 - MSTA LTR MaLR -4 424 1 319 253 183 84 chr2 6252173 6252375 -247004208 + MLT1J LTR MaLR 129 350 -161 3416 66 49 5 chr2 6252638 6253063 -247003520 - MLT2A1 LTR ERVL 0 444 1 266 309 57 16 chr2 6253263 6253457 -247003126 + L1ME4a LINE L1 5714 5915 -206 1873 102 4 8 chr2 6253468 6253724 -247002859 - AluSp SINE Alu -19 294 40 373 246 58 108 chr2 6254217 6254542 -247002041 + MER5C DNA MER1_type 14 322 -2 232 293 198 17 chr2 6255866 6255982 -247000601 - MIR SINE MIR -75 187 51 433 329 89 25 chr2 6256376 6256780 -246999803 - LTR16A LTR ERVL -13 437 8 1279 108 104 68 chr2 6257194 6257279 -246999304 - MER30 DNA MER1_type 0 230 150 2108 125 3 3 chr2 6257279 6257575 -246999008 - AluSc SINE Alu -13 296 1 1279 108 104 68 chr2 6257575 6257711 -246998872 - MER30 DNA MER1_type -80 150 1 185 373 27 9 chr2 6259584 6259694 -246996889 - MIR SINE MIR -85 177 66 589 289 17 6 chr2 6259958 6260131 -246996452 - MER5B DNA MER1_type -1 177 3 217 283 17 17 chr2 6260182 6260242 -246996341 - MER5A DNA MER1_type -16 173 114 440 360 47 64 chr2 6260493 6260965 -246995618 - L2 LINE L2 -1809 1505 1042 347 265 27 13 chr2 6261057 6261195 -246995388 + MLT1I LTR MaLR 73 181 -228 1008 269 88 7 chr2 6262052 6262168 -246994415 + MLT1A2 LTR MaLR 42 147 -227 252 0 0 0 chr2 6262168 6262196 -246994387 + (TG)n Simple_repeat Simple_repeat 1 28 0 1008 269 88 7 chr2 6262196 6262387 -246994196 + MLT1A2 LTR MaLR 147 374 0 218 114 0 23 chr2 6263289 6263333 -246993250 + (TC)n Simple_repeat Simple_repeat 2 44 0 198 0 0 0 chr2 6263333 6263355 -246993228 + (CA)n Simple_repeat Simple_repeat 1 22 0 393 264 155 29 chr2 6264429 6264630 -246991953 + MIR SINE MIR 3 213 -49 195 42 0 0 chr2 6264663 6264687 -246991896 + (TCTG)n Simple_repeat Simple_repeat 3 26 0 801 31 0 0 chr2 6264688 6264784 -246991799 + (TCTA)n Simple_repeat Simple_repeat 4 99 0 302 67 22 0 chr2 6265073 6265118 -246991465 + (TCTA)n Simple_repeat Simple_repeat 1 46 0 202 367 93 4 chr2 6265145 6265423 -246991160 + L3 LINE CR1 1128 1430 -147 438 318 42 42 chr2 6267700 6267936 -246988647 + MIR SINE MIR 21 256 -6 1320 88 0 0 chr2 6268298 6268468 -246988115 + AluY SINE Alu 126 295 -16 187 296 74 0 chr2 6269470 6269524 -246987059 - MER5B DNA MER1_type 0 178 121 38 22 0 0 chr2 6269967 6270012 -246986571 + AT_rich Low_complexity Low_complexity 1 45 0 2254 118 0 0 chr2 6270012 6270316 -246986267 + AluSc SINE Alu 3 306 -3 234 292 119 64 chr2 6270924 6271143 -246985440 + MIR SINE MIR 13 243 -19 793 219 39 0 chr2 6271415 6271620 -246984963 + L1MD2 LINE L1 5656 5868 -491 2299 95 0 0 chr2 6272564 6272870 -246983713 + AluY SINE Alu 1 306 -5 2079 90 62 3 chr2 6272906 6273195 -246983388 + AluSq SINE Alu 1 306 -7 394 274 15 22 chr2 6274738 6274873 -246981710 - MER94 DNA DNA 0 134 1 451 235 76 0 chr2 6275131 6275263 -246981320 - MER63 DNA MER1_type -276 786 19 12131 162 56 9 chr2 6276020 6278329 -246978254 - Tigger1 DNA MER2_type 0 2418 3 366 309 53 33 chr2 6278380 6278653 -246977930 - L1ME2 LINE L1 -4 6162 5879 1368 263 85 48 chr2 6278756 6279080 -246977503 - L1ME2 LINE L1 -277 5889 5578 2103 94 10 39 chr2 6279080 6279387 -246977196 - AluSg SINE Alu -11 299 2 1368 263 85 48 chr2 6279387 6280777 -246975806 - L1ME2 LINE L1 -588 5578 4124 26 0 0 0 chr2 6280795 6280821 -246975762 + AT_rich Low_complexity Low_complexity 1 26 0 293 274 105 0 chr2 6280821 6280945 -246975638 - L1ME2 LINE L1 -2210 3936 3800 22 70 0 0 chr2 6280974 6281017 -246975566 + AT_rich Low_complexity Low_complexity 1 43 0 29 60 0 0 chr2 6281422 6281472 -246975111 + AT_rich Low_complexity Low_complexity 1 50 0 442 177 14 34 chr2 6282069 6282216 -246974367 + CT-rich Low_complexity Low_complexity 1 144 0 820 126 6 27 chr2 6282216 6282399 -246974184 + (TTTC)n Simple_repeat Simple_repeat 1 179 0 296 297 7 83 chr2 6282896 6283041 -246973542 + MIR SINE MIR 47 180 -82 408 348 45 8 chr2 6283114 6283361 -246973222 + LTR16A LTR ERVL 56 311 -139 237 65 0 0 chr2 6283366 6283397 -246973186 + (CTTG)n Simple_repeat Simple_repeat 2 32 0 1768 147 53 3 chr2 6283400 6283685 -246972898 - AluSx SINE Alu -13 299 1 212 186 17 0 chr2 6284691 6284750 -246971833 + CT-rich Low_complexity Low_complexity 1 60 0 2184 132 6 0 chr2 6285173 6285484 -246971099 + AluSq SINE Alu 1 313 0 979 232 31 37 chr2 6285902 6286229 -246970354 - L1MB8 LINE L1 0 6178 5854 184 360 0 0 chr2 6286878 6286928 -246969655 + L2 LINE L2 3206 3255 -17 501 135 0 0 chr2 6286931 6287020 -246969563 + (GGAA)n Simple_repeat Simple_repeat 4 92 0 210 139 0 70 chr2 6287020 6287063 -246969520 + (GGGGA)n Simple_repeat Simple_repeat 5 44 0 186 208 0 0 chr2 6287625 6287673 -246968910 + (TA)n Simple_repeat Simple_repeat 1 48 0 189 234 31 62 chr2 6288601 6288665 -246967918 - L2 LINE L2 -11 3302 3241 444 330 62 20 chr2 6288702 6288919 -246967664 - MIR SINE MIR -1 261 37 3808 79 119 0 chr2 6290788 6290941 -246965642 - LTR66 LTR ERVL 0 610 477 327 113 0 0 chr2 6290941 6291003 -246965580 + (TA)n Simple_repeat Simple_repeat 2 63 0 3808 79 119 0 chr2 6291003 6291394 -246965189 - LTR66 LTR ERVL -133 477 1 27 0 0 0 chr2 6292235 6292262 -246964321 + AT_rich Low_complexity Low_complexity 1 27 0 226 294 43 22 chr2 6292601 6292693 -246963890 - MIR3 SINE MIR -6 202 109 27 29 0 0 chr2 6293056 6293090 -246963493 + AT_rich Low_complexity Low_complexity 1 34 0 1922 147 0 0 chr2 6293644 6293929 -246962654 + AluSg SINE Alu 1 285 -25 355 224 129 20 chr2 6293978 6294125 -246962458 + L1MDb LINE L1 1178 1340 -5069 5575 168 24 45 chr2 6295800 6297054 -246959529 - Tigger3b DNA MER2_type -3 1228 1 402 306 80 55 chr2 6298123 6298521 -246958062 + L2 LINE L2 1901 2308 -1006 895 229 89 50 chr2 6298867 6299225 -246957358 - MLT1A2 LTR MaLR -2 372 1 731 196 7 0 chr2 6300451 6300589 -246955994 - AluJb SINE Alu 0 312 174 2449 231 63 13 chr2 6300716 6301237 -246955346 - L1MB7 LINE L1 -101 6083 5590 2425 71 0 10 chr2 6301237 6301548 -246955035 - AluY SINE Alu -3 308 1 2449 231 63 13 chr2 6301548 6302275 -246954308 - L1MB7 LINE L1 -594 5590 4786 710 207 27 0 chr2 6302275 6302425 -246954158 - MLT1A1 LTR MaLR 0 365 212 1279 173 38 114 chr2 6302608 6302834 -246953749 + MLT1B LTR MaLR 1 182 -208 2060 139 0 3 chr2 6302834 6303137 -246953446 + AluSx SINE Alu 2 303 -9 1279 173 38 114 chr2 6303137 6303332 -246953251 + MLT1B LTR MaLR 182 390 0 713 179 20 4 chr2 6303851 6304107 -246952476 + (TG)n Simple_repeat Simple_repeat 1 260 0 2053 103 33 98 chr2 6306775 6306851 -246949732 - THE1B LTR MaLR 0 364 285 2075 127 14 0 chr2 6306851 6307142 -246949441 - AluSx SINE Alu -17 295 1 2053 103 33 98 chr2 6307142 6307454 -246949129 - THE1B LTR MaLR -79 285 1 265 286 53 85 chr2 6307547 6307714 -246948869 - MIR SINE MIR -27 235 73 1411 189 103 49 chr2 6307714 6308084 -246948499 - MLT1B LTR MaLR 0 390 1 265 286 53 85 chr2 6308084 6308105 -246948478 - MIR SINE MIR -189 73 53 213 298 53 0 chr2 6308318 6308375 -246948208 + MIR SINE MIR 1 60 -202 338 217 0 0 chr2 6308423 6308492 -246948091 - L2 LINE L2 -3 3310 3242 303 28 0 0 chr2 6309590 6309626 -246946957 + (TTTA)n Simple_repeat Simple_repeat 1 36 0 2567 50 0 0 chr2 6309629 6309930 -246946653 - AluY SINE Alu -10 301 1 697 150 36 7 chr2 6310850 6310990 -246945593 + L1PA15 LINE L1 6021 6164 -1 341 282 103 5 chr2 6311033 6311246 -246945337 + HAL1b LINE L1 260 493 -855 227 276 20 0 chr2 6311424 6311522 -246945061 + (TA)n Simple_repeat Simple_repeat 2 101 0 258 32 0 0 chr2 6311570 6311601 -246944982 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2165 100 11 0 chr2 6311603 6311882 -246944701 - AluSq SINE Alu -28 285 4 1863 182 42 25 chr2 6311927 6312277 -246944306 - L1PB4 LINE L1 0 6156 5796 234 62 0 0 chr2 6312277 6312309 -246944274 + (TG)n Simple_repeat Simple_repeat 2 33 0 1863 182 42 25 chr2 6312309 6312391 -246944192 - L1PB4 LINE L1 -360 5796 5717 225 65 0 0 chr2 6313100 6313131 -246943452 + (TTCA)n Simple_repeat Simple_repeat 1 31 0 2223 116 0 7 chr2 6313200 6313510 -246943073 + AluSq SINE Alu 1 308 -5 259 337 37 37 chr2 6313805 6313992 -246942591 + MIR SINE MIR 71 257 -5 651 236 21 82 chr2 6316083 6316316 -246940267 + MLT1A1 LTR MaLR 1 219 -146 242 248 31 39 chr2 6318104 6318233 -246938350 - L1ME LINE L1 -202 5919 5792 231 88 0 0 chr2 6318254 6318288 -246938295 + (TG)n Simple_repeat Simple_repeat 2 35 0 531 299 55 10 chr2 6318768 6318977 -246937606 - MIR SINE MIR -29 233 17 383 37 0 19 chr2 6319194 6319248 -246937335 + (TG)n Simple_repeat Simple_repeat 2 54 0 2239 96 33 7 chr2 6320340 6320642 -246935941 + AluSg SINE Alu 1 310 0 254 231 0 0 chr2 6320788 6320853 -246935730 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 1682 166 39 34 chr2 6321000 6321356 -246935227 - MLT1A1 LTR MaLR -7 358 1 793 176 0 0 chr2 6321357 6321505 -246935078 - L1MB1 LINE L1 -17 6151 6004 411 183 0 0 chr2 6321568 6321650 -246934933 + AluJ/FRAM SINE Alu 222 303 -9 199 383 8 39 chr2 6321948 6322076 -246934507 + L2 LINE L2 3148 3271 -1 744 171 8 0 chr2 6323004 6323127 -246933456 + FLAM_C SINE Alu 2 125 -8 274 371 61 0 chr2 6323279 6323411 -246933172 + MIR SINE MIR 53 192 -70 231 170 0 0 chr2 6323482 6323529 -246933054 + (TG)n Simple_repeat Simple_repeat 1 47 0 467 308 48 14 chr2 6323956 6324102 -246932481 + MER5B DNA MER1_type 28 178 0 193 296 14 28 chr2 6324179 6324250 -246932333 + L2 LINE L2 3194 3263 -9 1143 281 132 14 chr2 6324645 6325162 -246931421 - L2 LINE L2 -575 2739 2162 401 283 121 38 chr2 6325880 6326226 -246930357 + LTR16A1 LTR ERVL 71 445 -12 2270 108 7 0 chr2 6326376 6326683 -246929900 + AluSg SINE Alu 1 309 -1 1768 177 29 13 chr2 6327477 6327860 -246928723 + MLT2B1 LTR ERVL 2 436 -79 184 57 29 29 chr2 6327867 6327902 -246928681 + (TTATA)n Simple_repeat Simple_repeat 5 39 0 21 71 0 0 chr2 6328334 6328376 -246928207 + AT_rich Low_complexity Low_complexity 1 42 0 268 385 39 26 chr2 6330266 6330422 -246926161 + MIR SINE MIR 15 172 -90 2238 169 26 28 chr2 6331609 6332036 -246924547 + MSTB LTR MaLR 1 426 0 1093 232 14 21 chr2 6332106 6332386 -246924197 + MLT1A1 LTR MaLR 1 278 -87 2314 106 0 0 chr2 6332512 6332814 -246923769 + AluSx SINE Alu 1 302 -10 461 268 176 0 chr2 6332825 6332967 -246923616 - MER96 DNA MER1_type? -1 174 8 508 296 36 13 chr2 6333340 6333647 -246922936 + L1M4 LINE L1 3387 3700 -2446 235 138 0 52 chr2 6333662 6333720 -246922863 + (TA)n Simple_repeat Simple_repeat 1 55 0 560 247 71 61 chr2 6333729 6334025 -246922558 + L1M4 LINE L1 3719 4017 -2129 1721 161 32 7 chr2 6334121 6334424 -246922159 - AluJb SINE Alu 0 310 1 1684 242 138 9 chr2 6334541 6335236 -246921347 + L1M4 LINE L1 4493 5277 -869 6208 186 17 5 chr2 6335244 6337074 -246919509 + L1P5 LINE L1 3823 5679 -472 480 191 40 0 chr2 6337175 6337301 -246919282 + GA-rich Low_complexity Low_complexity 4 134 0 2100 122 0 7 chr2 6337423 6337718 -246918865 + AluSx SINE Alu 1 293 -19 5163 245 32 38 chr2 6338120 6339239 -246917344 + L1M4 LINE L1 20 1277 -5477 2084 131 0 0 chr2 6339239 6339541 -246917042 + AluSx SINE Alu 1 302 0 5163 245 32 38 chr2 6339541 6340183 -246916400 + L1M4 LINE L1 1277 1921 -4833 3621 230 111 67 chr2 6340215 6341647 -246914936 + L1MDa LINE L1 35 1542 -4998 1800 172 143 8 chr2 6341647 6342024 -246914559 - MSTA LTR MaLR 0 428 1 3621 230 111 67 chr2 6342024 6342140 -246914443 + L1MDa LINE L1 1542 1651 -4889 2310 270 54 46 chr2 6342171 6343869 -246912714 - L1PA12 LINE L1 -5608 1973 1 312 167 61 0 chr2 6343968 6344034 -246912549 - L1MDa LINE L1 -6436 104 35 23 0 0 0 chr2 6345917 6345940 -246910643 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr2 6346210 6346232 -246910351 + AT_rich Low_complexity Low_complexity 1 22 0 566 289 39 81 chr2 6347660 6347992 -246908591 + MLT1H LTR MaLR 37 354 -195 4064 215 42 82 chr2 6349909 6351414 -246905169 - Charlie1a DNA MER1_type -4 1451 6 214 306 145 40 chr2 6352553 6352677 -246903906 + L2 LINE L2 3136 3272 0 1882 256 49 18 chr2 6352976 6353479 -246903104 - L1 LINE L1 -2580 3566 3080 2046 147 86 18 chr2 6353479 6353874 -246902709 - MSTB LTR MaLR -4 422 1 1882 256 49 18 chr2 6353874 6354371 -246902212 - L1 LINE L1 -3066 3080 2498 1487 239 121 63 chr2 6354368 6354955 -246901628 - L1M4b LINE L1 -6219 640 20 * 379 335 107 5 chr2 6356914 6357120 -246899463 + MIR SINE MIR 31 257 -5 705 73 0 0 chr2 6357812 6357908 -246898675 + (TA)n Simple_repeat Simple_repeat 2 97 0 275 257 67 0 chr2 6358343 6358448 -246898135 + MARNA DNA Mariner 461 572 -14 23 68 0 0 chr2 6359038 6359082 -246897501 + AT_rich Low_complexity Low_complexity 1 44 0 23 33 0 0 chr2 6359546 6359576 -246897007 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr2 6359697 6359725 -246896858 + AT_rich Low_complexity Low_complexity 1 28 0 223 306 61 20 chr2 6359945 6360043 -246896540 - MIR SINE MIR -95 167 66 258 400 40 0 chr2 6361658 6361783 -246894800 - L2 LINE L2 -237 3035 2906 1270 187 239 16 chr2 6361847 6362227 -246894356 - MER31B LTR ERV1 -1 465 1 181 281 73 31 chr2 6362253 6362349 -246894234 - L2 LINE L2 -480 2834 2735 366 332 75 11 chr2 6363094 6363281 -246893302 + MIR SINE MIR 53 251 -11 212 175 25 0 chr2 6364104 6364144 -246892439 + CT-rich Low_complexity Low_complexity 1 41 0 210 208 75 0 chr2 6364864 6364917 -246891666 - MIR SINE MIR -142 120 64 194 333 25 37 chr2 6364953 6365034 -246891549 + MIR SINE MIR 63 142 -120 3779 113 53 14 chr2 6365266 6365947 -246890636 - L1MA3 LINE L1 0 6305 5643 4119 106 48 100 chr2 6365310 6365493 -246891090 - L1MA3 LINE L1 -44 6261 6070 269 68 23 0 chr2 6365493 6365537 -246891046 + (GTTTG)n Simple_repeat Simple_repeat 2 46 0 4119 106 48 100 chr2 6365537 6365947 -246890636 - L1MA3 LINE L1 -235 6070 5655 255 217 0 0 chr2 6365947 6366007 -246890576 + (CATATA)n Simple_repeat Simple_repeat 3 62 0 4119 106 48 100 chr2 6366007 6366146 -246890437 - L1MA3 LINE L1 -650 5655 5510 217 341 57 16 chr2 6366882 6367005 -246889578 + MIR SINE MIR 67 194 -68 1994 113 60 0 chr2 6367007 6367291 -246889292 + AluSx SINE Alu 1 301 -11 1473 190 10 14 chr2 6367571 6367860 -246888723 + AluJo SINE Alu 1 288 -24 30 45 0 0 chr2 6367860 6367904 -246888679 + AT_rich Low_complexity Low_complexity 1 44 0 203 240 93 40 chr2 6368048 6368123 -246888460 + L2 LINE L2 3234 3312 -1 186 103 0 0 chr2 6368173 6368202 -246888381 + (TG)n Simple_repeat Simple_repeat 2 30 0 2181 105 7 0 chr2 6368549 6368835 -246887748 + AluSx SINE Alu 1 288 -24 380 326 17 12 chr2 6370252 6370424 -246886159 - MLT1L LTR MaLR 0 615 443 359 258 75 0 chr2 6371999 6372092 -246884491 - MER45A DNA AcHobo -53 125 26 313 315 26 3 chr2 6372165 6372329 -246884254 + MIR SINE MIR 45 211 -51 2432 68 3 3 chr2 6372676 6372987 -246883596 + AluY SINE Alu 1 311 0 1807 161 39 86 chr2 6373005 6373389 -246883194 + MER47A DNA MER2_type 1 366 0 2132 110 0 0 chr2 6374177 6374485 -246882098 - AluY SINE Alu 0 308 1 33 0 0 0 chr2 6378053 6378086 -246878497 + AT_rich Low_complexity Low_complexity 1 33 0 182 333 48 0 chr2 6378221 6378284 -246878299 - MIR SINE MIR -119 143 78 2418 238 67 12 chr2 6378530 6379127 -246877456 - LTR27 LTR ERV1 0 636 7 1652 171 14 73 chr2 6379300 6379669 -246876914 - MLT1B LTR MaLR 0 390 44 278 250 0 0 chr2 6380182 6380242 -246876341 + MIR SINE MIR 87 146 -62 279 314 69 10 chr2 6380374 6380476 -246876107 - MIR SINE MIR -48 214 107 23 0 0 0 chr2 6382279 6382302 -246874281 + AT_rich Low_complexity Low_complexity 1 23 0 199 338 0 15 chr2 6384045 6384113 -246872470 - MIR SINE MIR -76 186 120 294 274 96 37 chr2 6386436 6386571 -246870012 + MIR3 SINE MIR 63 205 -3 333 315 19 9 chr2 6386755 6386863 -246869720 + L2 LINE L2 3154 3262 -51 241 47 156 16 chr2 6386916 6386980 -246869603 + (TTAAA)n Simple_repeat Simple_repeat 4 76 0 327 191 0 32 chr2 6387280 6387406 -246869177 + GA-rich Low_complexity Low_complexity 3 124 0 1465 191 28 3 chr2 6387429 6387712 -246868871 + AluJo SINE Alu 9 298 -14 809 51 5 82 chr2 6387747 6387942 -246868641 + (GGGAA)n Simple_repeat Simple_repeat 1 180 0 276 163 0 50 chr2 6387926 6388006 -246868577 + GA-rich Low_complexity Low_complexity 3 78 0 * 234 0 0 0 chr2 6388153 6388179 -246868404 + (TA)n Simple_repeat Simple_repeat 2 27 0 387 317 42 7 chr2 6389136 6389278 -246867305 + MIR SINE MIR 7 153 -109 2249 110 3 7 chr2 6392828 6393137 -246863446 - AluSq SINE Alu -5 308 1 693 290 157 34 chr2 6394603 6395010 -246861573 - LTR16B LTR ERVL -1 463 7 2384 138 119 8 chr2 6397457 6397842 -246858741 - MSTA LTR MaLR 0 428 1 439 331 82 5 chr2 6398013 6398197 -246858386 - L2 LINE L2 -163 3109 2912 259 150 33 0 chr2 6398222 6398282 -246858301 + CT-rich Low_complexity Low_complexity 3 64 0 1910 197 110 22 chr2 6398290 6398792 -246857791 - LTR10B LTR ERV1 -1 546 1 270 253 179 0 chr2 6398922 6399017 -246857566 - MLT1D LTR MaLR 0 505 394 370 313 96 34 chr2 6399342 6399894 -246856689 - L1ME3A LINE L1 -239 5931 5346 27 29 0 0 chr2 6400072 6400106 -246856477 + AT_rich Low_complexity Low_complexity 1 34 0 426 302 101 28 chr2 6400134 6400422 -246856161 - L1ME3A LINE L1 -1108 5038 4730 2260 113 0 0 chr2 6400448 6400749 -246855834 - AluSq SINE Alu -12 301 1 227 286 160 45 chr2 6400846 6401047 -246855536 + MIR SINE MIR 36 256 -6 21 0 0 0 chr2 6401122 6401143 -246855440 + AT_rich Low_complexity Low_complexity 1 21 0 202 321 136 31 chr2 6401690 6401852 -246854731 - MIR SINE MIR -6 256 78 1401 208 71 75 chr2 6401855 6402322 -246854261 - MLT1C LTR MaLR -2 465 1 345 47 0 0 chr2 6402333 6402376 -246854207 + (TG)n Simple_repeat Simple_repeat 2 44 0 398 336 39 50 chr2 6402540 6402799 -246853784 + L3 LINE CR1 836 1091 -486 225 245 43 43 chr2 6402799 6402893 -246853690 - MLT1J1 LTR MaLR 0 446 353 1585 211 38 30 chr2 6402904 6403274 -246853309 + MLT1A2 LTR MaLR 2 374 0 2494 67 3 0 chr2 6404606 6404906 -246851677 - AluY SINE Alu -10 301 1 262 279 38 13 chr2 6405316 6405395 -246851188 - MLT1G LTR MaLR -503 87 7 954 151 0 0 chr2 6405669 6405821 -246850762 + L1PBa LINE L1 3 154 -6709 430 176 12 0 chr2 6405887 6405972 -246850611 + L1PBa LINE L1 856 941 -5922 7316 208 17 3 chr2 6406064 6408191 -246848392 + L1PBa LINE L1 177 1644 -5219 227 88 29 0 chr2 6408191 6408225 -246848358 + MSTA LTR MaLR 1 35 -393 203 274 96 59 chr2 6408701 6408836 -246847747 + MER5B DNA MER1_type 5 144 -34 286 214 87 29 chr2 6408721 6408824 -246847759 - MER5A DNA MER1_type -22 167 59 2321 100 0 0 chr2 6409049 6409350 -246847233 + AluSx SINE Alu 1 301 -11 2807 145 59 11 chr2 6411159 6411684 -246844899 + Tigger3(Golem) DNA MER2_type 2478 3027 -2 328 202 16 57 chr2 6411684 6411807 -246844776 - Charlie2 DNA MER1_type -507 2355 2238 523 297 72 14 chr2 6411903 6412112 -246844471 - Charlie2 DNA MER1_type -2534 248 28 1877 207 71 7 chr2 6412580 6412985 -246843598 + MLT2C2 LTR ERVL 3 534 -20 361 244 47 0 chr2 6412995 6413081 -246843502 - L1MC4 LINE L1 -1339 6703 6614 302 183 0 17 chr2 6413052 6413112 -246843471 - L1MCa LINE L1 -4362 2064 2006 * 401 326 102 5 chr2 6413169 6413365 -246843218 + MIR SINE MIR 23 237 -25 265 137 63 105 chr2 6413936 6414031 -246842552 + L2 LINE L2 3117 3207 -106 344 229 0 0 chr2 6414509 6414579 -246842004 + MIR SINE MIR 86 155 -107 286 174 0 10 chr2 6414587 6414656 -246841927 - MLT2D LTR ERVL -2 412 367 738 209 10 19 chr2 6414656 6415074 -246841509 + (CATATA)n Simple_repeat Simple_repeat 1 414 0 225 231 0 0 chr2 6415074 6415126 -246841457 - L1MC4 LINE L1 -1343 6699 6648 585 173 27 0 chr2 6415128 6415278 -246841305 + (CATATA)n Simple_repeat Simple_repeat 4 157 0 2088 189 16 7 chr2 6415278 6415660 -246840923 - MLT2D LTR ERVL -40 480 1 1012 231 19 64 chr2 6417219 6417656 -246838927 + L1MA9 LINE L1 5861 6274 -38 281 26 26 0 chr2 6417738 6417776 -246838807 + (CA)n Simple_repeat Simple_repeat 2 40 0 1019 282 61 22 chr2 6418352 6418841 -246837742 - MLT1H LTR MaLR -41 508 1 307 282 34 8 chr2 6419286 6419403 -246837180 - MLT1I LTR MaLR 0 409 290 552 215 66 0 chr2 6419515 6419636 -246836947 + FLAM_A SINE Alu 1 129 -4 259 196 0 0 chr2 6421819 6421865 -246834718 + L2 LINE L2 3261 3306 -7 291 326 120 23 chr2 6421880 6422191 -246834392 - L2 LINE L2 -2 3270 2871 183 266 0 0 chr2 6422201 6422265 -246834318 + (TTCA)n Simple_repeat Simple_repeat 3 66 0 2789 239 73 10 chr2 6422465 6423700 -246832883 + Charlie1a DNA MER1_type 1 1384 -71 546 278 107 37 chr2 6423968 6424043 -246832540 - MIR SINE MIR -29 233 165 2594 110 6 3 chr2 6424043 6424406 -246832177 + THE1B LTR MaLR 1 364 0 546 278 107 37 chr2 6424406 6424546 -246832037 - MIR SINE MIR -97 165 3 193 239 0 0 chr2 6425407 6425453 -246831130 + MER5A DNA MER1_type 122 167 -22 1228 228 19 42 chr2 6426302 6426662 -246829921 + MLT1A1 LTR MaLR 1 352 -13 306 332 78 29 chr2 6426940 6427145 -246829438 - L1MC/D LINE L1 -2336 5472 5258 281 301 15 15 chr2 6427337 6427472 -246829111 - L1MC/D LINE L1 -1111 5035 4901 358 248 120 77 chr2 6427513 6427864 -246828719 - L1MC/D LINE L1 -1316 4830 4465 1033 145 6 0 chr2 6427900 6428066 -246828517 - AluSg/x SINE Alu -5 305 139 515 325 34 30 chr2 6428071 6428366 -246828217 - L1MC/D LINE L1 -1730 4416 4121 747 176 124 9 chr2 6428367 6428577 -246828006 + MER44D DNA MER2_type 2 505 -104 2495 151 31 7 chr2 6428579 6428995 -246827588 - MSTA LTR MaLR -2 426 1 988 154 6 0 chr2 6428999 6429155 -246827428 + AluSg/x SINE Alu 147 303 -9 1706 131 95 0 chr2 6429361 6429644 -246826939 + AluSx SINE Alu 1 310 -2 283 146 45 22 chr2 6430279 6430368 -246826215 + (TATATG)n Simple_repeat Simple_repeat 6 96 0 379 301 70 7 chr2 6430996 6431139 -246825444 + MER5B DNA MER1_type 1 152 -26 189 0 0 0 chr2 6431294 6431315 -246825268 + (T)n Simple_repeat Simple_repeat 1 21 0 207 243 29 0 chr2 6431798 6431868 -246824715 + (TA)n Simple_repeat Simple_repeat 2 73 0 247 321 89 0 chr2 6432057 6432169 -246824414 - MIR SINE MIR -70 192 71 356 47 0 0 chr2 6433742 6433785 -246822798 + (TG)n Simple_repeat Simple_repeat 2 44 0 209 338 15 0 chr2 6434649 6434717 -246821866 + MIR3 SINE MIR 137 205 -3 944 185 11 5 chr2 6434841 6435030 -246821553 - MLT2C1 LTR ERVL -54 343 154 1144 214 143 31 chr2 6435040 6435396 -246821187 - MSTD LTR MaLR 0 396 1 1119 239 49 3 chr2 6435396 6435701 -246820882 - MSTD-int LTR MaLR 0 1735 1417 1411 163 71 37 chr2 6435701 6436027 -246820556 + THE1C LTR MaLR 1 337 -38 3090 250 114 37 chr2 6436145 6437336 -246819247 - MSTD-int LTR MaLR -369 1282 1 1307 241 84 45 chr2 6437336 6437717 -246818866 - MSTD LTR MaLR 0 396 1 804 140 7 0 chr2 6437717 6437860 -246818723 - MLT2C2 LTR ERVL -316 148 5 334 222 13 6 chr2 6438689 6438847 -246817736 + GA-rich Low_complexity Low_complexity 1 159 0 2171 130 0 0 chr2 6439106 6439413 -246817170 + AluSx SINE Alu 5 311 -1 517 271 47 96 chr2 6439730 6440117 -246816466 + LTR16B LTR ERVL 84 451 -13 437 278 28 0 chr2 6440123 6440231 -246816352 - MER81 DNA DNA -2 112 2 222 308 187 19 chr2 6440682 6440789 -246815794 - L2 LINE L2 -1 3271 3147 210 128 0 0 chr2 6440862 6440901 -246815682 + (TTA)n Simple_repeat Simple_repeat 3 41 0 246 399 35 35 chr2 6440933 6441136 -246815447 - L2 LINE L2 -244 3028 2826 1007 184 0 24 chr2 6441169 6441376 -246815207 + MLT1A1 LTR MaLR 1 202 -163 1849 181 49 0 chr2 6441407 6441755 -246814828 - MLT1A1 LTR MaLR 0 365 1 189 274 42 74 chr2 6442654 6442749 -246813834 - MIR SINE MIR -108 154 63 322 269 99 41 chr2 6443114 6443285 -246813298 + MLT1J2 LTR MaLR 270 450 0 304 360 124 22 chr2 6443299 6443574 -246813009 + L2 LINE L2 2571 2873 -441 2312 63 11 0 chr2 6443661 6443947 -246812636 - AluY SINE Alu -22 289 1 2488 185 55 72 chr2 6443947 6444868 -246811715 + MER63C DNA MER1_type 11 836 -224 1603 164 20 49 chr2 6444868 6445173 -246811410 + AluJb SINE Alu 1 296 -16 2488 185 55 72 chr2 6445173 6445265 -246811318 + MER63C DNA MER1_type 836 928 -2 218 378 72 9 chr2 6445282 6445393 -246811190 + L2 LINE L2 2948 3065 -207 1386 234 121 59 chr2 6446090 6446769 -246809814 + MER50 LTR ERV1 14 734 0 263 414 21 21 chr2 6447094 6447285 -246809298 + MIR SINE MIR 47 237 -25 24 0 0 0 chr2 6447377 6447401 -246809182 + AT_rich Low_complexity Low_complexity 1 24 0 782 230 59 59 chr2 6447546 6447768 -246808815 + MIR SINE MIR 15 236 -26 2443 119 11 16 chr2 6447905 6448282 -246808301 - THE1C LTR MaLR 0 375 1 803 202 62 31 chr2 6448696 6448953 -246807630 + MER97b DNA MER1_type? 47 311 -742 3058 133 16 4 chr2 6448980 6449493 -246807090 - L1PA16 LINE L1 -140 6026 5508 8908 86 5 13 chr2 6449601 6450884 -246805699 - L1P3 LINE L1 -5188 1273 2 222 182 26 13 chr2 6451217 6451294 -246805289 + (TG)n Simple_repeat Simple_repeat 1 78 0 22 35 0 0 chr2 6451734 6451763 -246804820 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr2 6451807 6451829 -246804754 + AT_rich Low_complexity Low_complexity 1 22 0 726 155 17 28 chr2 6452849 6453030 -246803553 + GA-rich Low_complexity Low_complexity 2 180 0 22 35 0 0 chr2 6455085 6455114 -246801469 + AT_rich Low_complexity Low_complexity 1 29 0 1127 267 114 27 chr2 6456390 6457177 -246799406 + HAL1 LINE L1 1036 1891 -616 378 242 104 30 chr2 6458090 6458321 -246798262 - L1ME4a LINE L1 -257 5864 5617 225 296 12 0 chr2 6458486 6458567 -246798016 - L1ME4a LINE L1 -929 5404 5323 200 362 140 9 chr2 6458768 6458989 -246797594 + L2 LINE L2 2436 2685 -629 531 235 75 30 chr2 6459112 6459539 -246797044 + MLT1C LTR MaLR 6 467 0 3096 86 7 18 chr2 6459643 6460098 -246796485 - L1PA13 LINE L1 -4 6159 5710 204 233 0 0 chr2 6460575 6460618 -246795965 + (CATATA)n Simple_repeat Simple_repeat 3 45 0 456 277 119 45 chr2 6460674 6461252 -246795331 - L1ME4a LINE L1 -238 5883 5263 802 165 170 6 chr2 6461325 6461507 -246795076 - Tigger5 DNA MER2_type 0 2323 2112 1040 257 55 3 chr2 6461512 6461804 -246794779 - Tigger5 DNA MER2_type -2016 307 1 1881 110 18 18 chr2 6465615 6465917 -246790666 - AluSg SINE Alu 0 302 1 2020 135 0 0 chr2 6466206 6466509 -246790074 - AluSx SINE Alu 0 303 1 28 0 0 0 chr2 6467077 6467105 -246789478 + AT_rich Low_complexity Low_complexity 1 28 0 851 151 20 0 chr2 6469092 6469244 -246787339 + MLT2D LTR ERVL 1 155 -259 229 143 143 18 chr2 6469311 6469367 -246787216 - MLT2C2 LTR ERVL -285 179 117 * 1005 209 34 34 chr2 6469331 6469599 -246786984 + MLT2D LTR ERVL 145 412 -2 1159 221 130 54 chr2 6469649 6470099 -246786484 + MLT2B1 LTR ERVL 1 492 -28 324 0 0 0 chr2 6470099 6470135 -246786448 + (CA)n Simple_repeat Simple_repeat 2 37 0 1159 221 130 54 chr2 6470135 6470167 -246786416 + MLT2B1 LTR ERVL 492 520 0 188 358 59 64 chr2 6470211 6470415 -246786168 - L2 LINE L2 -113 3159 2957 28 48 0 0 chr2 6471276 6471318 -246785265 + AT_rich Low_complexity Low_complexity 1 42 0 5859 119 67 2 chr2 6471660 6472757 -246783826 - L1PBa LINE L1 -4016 2847 1680 1277 103 0 0 chr2 6472857 6473031 -246783552 + AluY SINE Alu 138 311 0 1506 134 0 0 chr2 6473388 6473604 -246782979 - AluY SINE Alu -13 298 83 994 192 0 0 chr2 6475095 6475262 -246781321 - FRAM SINE Alu -9 167 1 324 371 102 15 chr2 6475608 6475813 -246780770 + MIR SINE MIR 40 262 0 275 328 123 0 chr2 6476296 6476418 -246780165 - MIR SINE MIR -76 186 50 228 238 0 48 chr2 6477858 6477921 -246778662 + GA-rich Low_complexity Low_complexity 3 62 0 5900 196 48 11 chr2 6478322 6479447 -246777136 + L1 LINE L1 3180 4377 -1769 635 289 24 14 chr2 6479447 6479655 -246776928 - MER6B DNA MER2_type 0 210 1 5900 196 48 11 chr2 6479655 6480036 -246776547 + L1 LINE L1 4377 4742 -1404 4742 253 100 58 chr2 6480048 6482161 -246774422 - L1MDa LINE L1 -4336 2204 3 23 68 0 0 chr2 6482366 6482410 -246774173 + AT_rich Low_complexity Low_complexity 1 44 0 26 0 0 0 chr2 6482843 6482869 -246773714 + AT_rich Low_complexity Low_complexity 1 26 0 426 272 109 22 chr2 6483729 6483913 -246772670 - MIR SINE MIR -15 247 48 422 288 14 63 chr2 6485428 6485650 -246770933 - L2 LINE L2 0 3313 3103 590 159 0 65 chr2 6485677 6485784 -246770799 + AluSq/x SINE Alu 14 113 -199 1004 73 15 0 chr2 6485784 6485920 -246770663 - THE1C LTR MaLR 0 375 238 825 243 136 20 chr2 6485932 6486372 -246770211 - L1M4 LINE L1 -2098 4048 3558 1245 114 15 0 chr2 6486375 6486576 -246770007 - L1MA3 LINE L1 0 6305 6102 4676 210 29 66 chr2 6486577 6488367 -246768216 - L1 LINE L1 -827 6738 5115 2192 119 3 0 chr2 6488367 6488670 -246767913 + AluSp SINE Alu 1 304 -9 4676 210 29 66 chr2 6488670 6488976 -246767607 - L1 LINE L1 -2450 5115 4799 960 93 8 0 chr2 6488980 6489109 -246767474 - AluSc SINE Alu -15 294 165 782 219 60 17 chr2 6489109 6489411 -246767172 - L1 LINE L1 -2759 4806 4492 6568 75 1 4 chr2 6489540 6490765 -246765818 - L1PA7 LINE L1 -29 6125 4906 13340 183 36 9 chr2 6490770 6493320 -246763263 - L1 LINE L1 -4936 2629 11 354 284 21 76 chr2 6493411 6493940 -246762643 - L1M4 LINE L1 -2696 3450 2951 26 50 0 0 chr2 6494630 6494670 -246761913 + AT_rich Low_complexity Low_complexity 1 40 0 210 264 0 0 chr2 6495753 6495806 -246760777 + L2 LINE L2 3203 3255 -17 263 279 67 19 chr2 6497147 6497251 -246759332 - MIR SINE MIR -64 144 36 392 295 26 58 chr2 6497252 6497408 -246759175 + MIR SINE MIR 56 206 -56 239 418 112 16 chr2 6497511 6497760 -246758823 - L2 LINE L2 -40 3232 2960 1521 259 87 26 chr2 6497864 6498523 -246758060 - L1ME1 LINE L1 -114 6052 5354 194 193 18 0 chr2 6498523 6498580 -246758003 + (TA)n Simple_repeat Simple_repeat 1 58 0 1352 210 127 131 chr2 6498590 6499262 -246757321 - L1ME1 LINE L1 -797 5349 4561 697 213 0 0 chr2 6499262 6499384 -246757199 + FAM SINE Alu 21 142 -43 1352 210 127 131 chr2 6499384 6499748 -246756835 - L1ME1 LINE L1 -1585 4561 4197 524 290 134 13 chr2 6499748 6500055 -246756528 - L1M4 LINE L1 -1833 4313 3970 28 29 0 0 chr2 6500163 6500198 -246756385 + AT_rich Low_complexity Low_complexity 1 35 0 1076 205 101 14 chr2 6500435 6500713 -246755870 - MER58B DNA MER1_type -4 337 36 1986 212 8 32 chr2 6502058 6502529 -246754054 - MLT1C LTR MaLR 0 467 8 456 321 63 66 chr2 6503575 6503971 -246752612 - L2 LINE L2 -28 3244 2850 25 51 0 0 chr2 6504252 6504291 -246752292 + AT_rich Low_complexity Low_complexity 1 39 0 314 276 11 0 chr2 6504856 6504943 -246751640 + MIR SINE MIR 7 94 -168 193 290 93 28 chr2 6505283 6505390 -246751193 + MIR SINE MIR 32 145 -63 243 244 0 0 chr2 6505785 6505839 -246750744 + MIR SINE MIR 71 124 -84 340 343 43 60 chr2 6506392 6506625 -246749958 - L3 LINE CR1 -208 1369 1141 191 36 36 0 chr2 6507094 6507122 -246749461 + (CA)n Simple_repeat Simple_repeat 1 29 0 256 333 0 46 chr2 6507888 6507996 -246748587 - L3 LINE CR1 -320 1257 1155 346 368 51 31 chr2 6508054 6508407 -246748176 - L3 LINE CR1 -552 1025 666 1256 67 0 0 chr2 6508878 6509028 -246747555 + AluSq/x SINE Alu 1 150 -163 1238 111 6 18 chr2 6509129 6509300 -246747283 - AluSq SINE Alu -133 180 12 192 302 0 0 chr2 6509794 6509847 -246746736 + MIR3 SINE MIR 113 165 -43 241 313 130 9 chr2 6510410 6510525 -246746058 + MLT1H1 LTR MaLR 102 230 -325 * 265 228 32 65 chr2 6510521 6510644 -246745939 + MLT1F1 LTR MaLR 443 561 -6 201 250 0 0 chr2 6510932 6510976 -246745607 + L3b LINE CR1 1532 1575 -8 198 0 0 0 chr2 6512417 6512439 -246744144 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 317 243 117 10 chr2 6512907 6513010 -246743573 - MIR SINE MIR -65 143 30 278 343 43 7 chr2 6513697 6513837 -246742746 + MIR SINE MIR 51 195 -67 1479 378 25 5 chr2 6514319 6514687 -246741896 - THE1C LTR MaLR 0 375 1 342 281 75 50 chr2 6514692 6514852 -246741731 - MIR SINE MIR -12 250 87 5409 206 51 23 chr2 6515186 6516370 -246740213 - L1MC1 LINE L1 -2 6331 5181 2023 131 34 0 chr2 6516370 6516661 -246739922 + AluSx SINE Alu 1 301 -11 5409 206 51 23 chr2 6516661 6517346 -246739237 - L1MC1 LINE L1 -1152 5181 4395 1448 228 72 20 chr2 6517346 6517693 -246738890 + MLT1A1 LTR MaLR 1 365 0 5409 206 51 23 chr2 6517693 6518095 -246738488 - L1MC1 LINE L1 -1938 4395 4005 1926 149 0 34 chr2 6518986 6519308 -246737275 - AluSx SINE Alu -1 311 1 465 34 0 0 chr2 6519419 6519478 -246737105 + (CA)n Simple_repeat Simple_repeat 1 59 0 230 258 32 0 chr2 6519944 6520006 -246736577 + GA-rich Low_complexity Low_complexity 1 64 0 238 294 65 0 chr2 6520830 6520922 -246735661 - MIR SINE MIR -41 221 124 306 259 120 0 chr2 6521206 6521314 -246735269 - L1ME LINE L1 -440 5681 5561 268 172 0 31 chr2 6522538 6522602 -246733981 + MER5A DNA MER1_type 43 104 -85 21 0 0 0 chr2 6523895 6523916 -246732667 + AT_rich Low_complexity Low_complexity 1 21 0 236 256 35 35 chr2 6524014 6524100 -246732483 - L2 LINE L2 -185 3087 3002 466 311 42 33 chr2 6525086 6525298 -246731285 - MIR SINE MIR -3 259 46 404 325 57 31 chr2 6526826 6527054 -246729529 + MIR SINE MIR 18 251 -11 187 354 25 0 chr2 6527934 6528013 -246728570 + L2 LINE L2 3187 3267 -5 344 196 27 20 chr2 6528682 6528830 -246727753 + (CA)n Simple_repeat Simple_repeat 1 149 0 272 97 42 14 chr2 6528856 6528928 -246727655 + (CA)n Simple_repeat Simple_repeat 1 74 0 22 0 0 0 chr2 6529494 6529516 -246727067 + AT_rich Low_complexity Low_complexity 1 22 0 1668 235 15 50 chr2 6529653 6530176 -246726407 - MLT1D LTR MaLR 0 505 1 214 292 42 25 chr2 6530821 6530941 -246725642 - MIR SINE MIR -120 142 21 320 290 8 40 chr2 6533313 6533437 -246723146 + MIR SINE MIR 34 153 -109 21 36 0 0 chr2 6533462 6533490 -246723093 + AT_rich Low_complexity Low_complexity 1 28 0 1481 195 8 69 chr2 6535456 6535845 -246720738 - MLT1A1 LTR MaLR 0 365 1 204 329 0 0 chr2 6536254 6536333 -246720250 + G-rich Low_complexity Low_complexity 1 79 0 234 62 0 0 chr2 6536705 6536737 -246719846 + (TAA)n Simple_repeat Simple_repeat 1 32 0 202 286 0 0 chr2 6537798 6537868 -246718715 + A-rich Low_complexity Low_complexity 1 70 0 273 179 21 32 chr2 6537993 6538088 -246718495 + T-rich Low_complexity Low_complexity 2 95 0 287 333 23 57 chr2 6538269 6538533 -246718050 + L2 LINE L2 2841 3095 -177 244 203 0 47 chr2 6538579 6538643 -246717940 + L2 LINE L2 3187 3247 -25 588 308 68 8 chr2 6539410 6539647 -246716936 - MIR SINE MIR -11 251 1 7942 179 17 23 chr2 6541067 6542617 -246713966 - LTR25-int LTR ERV1 -5197 1799 259 484 138 11 53 chr2 6542621 6542715 -246713868 - LTR25-int LTR ERV1 -6905 91 2 4567 139 55 4 chr2 6542733 6543485 -246713098 - LTR25 LTR ERV1 0 794 1 191 256 0 23 chr2 6544530 6544573 -246712010 - MIR3 SINE MIR -24 184 143 563 290 43 0 chr2 6545982 6546144 -246710439 - MIR SINE MIR -2 260 92 529 318 23 9 chr2 6546316 6546533 -246710050 + MIR SINE MIR 5 224 -38 259 368 48 0 chr2 6546726 6546851 -246709732 + MIR SINE MIR 20 150 -112 186 302 83 0 chr2 6546967 6547063 -246709520 - MIR SINE MIR -76 132 29 35 63 0 0 chr2 6547626 6547689 -246708894 + AT_rich Low_complexity Low_complexity 1 63 0 2270 108 3 0 chr2 6548771 6549066 -246707517 - AluSx SINE Alu -16 296 1 1971 89 11 4 chr2 6549475 6549746 -246706837 + AluY SINE Alu 39 311 0 1465 161 62 40 chr2 6549754 6550058 -246706525 + AluJo SINE Alu 1 311 -1 245 106 0 43 chr2 6550457 6550504 -246706079 + (GGAA)n Simple_repeat Simple_repeat 3 47 0 199 274 32 0 chr2 6550542 6550604 -246705979 + MIR SINE MIR 159 222 -40 185 158 132 0 chr2 6555012 6555050 -246701533 + MIR SINE MIR 81 123 -85 2387 134 8 21 chr2 6556940 6557320 -246699263 + THE1C LTR MaLR 1 375 0 205 284 142 45 chr2 6559132 6559266 -246697317 + L2 LINE L2 3166 3312 -1 228 325 13 0 chr2 6560242 6560319 -246696264 - MIR SINE MIR -108 154 77 199 220 7 50 chr2 6561481 6561622 -246694961 + GA-rich Low_complexity Low_complexity 2 136 0 243 285 146 8 chr2 6562139 6562262 -246694321 + L2 LINE L2 3132 3271 -1 229 301 12 0 chr2 6562431 6562514 -246694069 + MIR SINE MIR 111 194 -68 748 247 57 10 chr2 6562552 6562746 -246693837 - MLT1B LTR MaLR 0 467 265 329 281 9 9 chr2 6562746 6562860 -246693723 - MIR SINE MIR -132 130 17 794 196 87 4 chr2 6562931 6563156 -246693427 - MLT1B LTR MaLR -186 204 9 625 289 21 4 chr2 6563193 6563428 -246693155 + MIR SINE MIR 20 258 -4 352 242 77 0 chr2 6565024 6565115 -246691468 + MER63 DNA MER1_type 1 724 -338 567 203 99 81 chr2 6565514 6565736 -246690847 + HAL1 LINE L1 1 226 -2281 818 170 12 12 chr2 6566219 6566469 -246690114 + GA-rich Low_complexity Low_complexity 1 250 0 357 24 0 0 chr2 6566471 6566513 -246690070 + (GGAA)n Simple_repeat Simple_repeat 1 42 0 825 241 137 52 chr2 6566514 6566938 -246689645 - MLT1C LTR MaLR -4 463 4 237 259 12 25 chr2 6566941 6567022 -246689561 + GA-rich Low_complexity Low_complexity 3 82 0 1843 219 73 7 chr2 6567132 6567584 -246688999 + L1MB2 LINE L1 5686 6167 -4 406 83 0 17 chr2 6567886 6567946 -246688637 - L1PA13 LINE L1 -847 5458 5400 5025 90 1 13 chr2 6567946 6568644 -246687939 + L1PA13 LINE L1 5470 6161 -2 198 260 26 52 chr2 6569410 6569487 -246687096 - MIR3 SINE MIR -39 169 95 210 37 0 0 chr2 6569767 6569794 -246686789 + (CAGAGA)n Simple_repeat Simple_repeat 4 30 0 209 270 126 50 chr2 6570513 6570672 -246685911 - MIR3 SINE MIR -22 186 16 226 304 194 42 chr2 6571175 6571366 -246685217 + MIR SINE MIR 30 249 -13 399 306 136 71 chr2 6571859 6572425 -246684158 + L1MC4a LINE L1 5265 5867 -1941 1868 81 20 6 chr2 6573100 6573490 -246683093 - MLT2A2 LTR ERVL 0 453 1 515 294 0 0 chr2 6574575 6574738 -246681845 + MIR SINE MIR 95 257 -5 219 333 28 28 chr2 6574760 6574868 -246681715 - MIR SINE MIR -64 144 37 483 332 62 7 chr2 6575177 6575451 -246681132 - L1ME LINE L1 -307 5814 5526 661 123 0 25 chr2 6575601 6575723 -246680860 + (GGAA)n Simple_repeat Simple_repeat 1 119 0 199 274 32 0 chr2 6575761 6575823 -246680760 + MIR SINE MIR 159 222 -40 191 343 81 6 chr2 6576323 6576495 -246680088 + L2 LINE L2 2981 3165 -148 2025 130 33 20 chr2 6576598 6576899 -246679684 - AluSq SINE Alu -8 305 1 2586 71 21 0 chr2 6576974 6577312 -246679271 + L1P3 LINE L1 5361 5705 -467 219 319 8 50 chr2 6577313 6577432 -246679151 + L2 LINE L2 3180 3293 -20 327 301 64 13 chr2 6578523 6578679 -246677904 - MIR SINE MIR -62 200 37 450 83 0 42 chr2 6578747 6578819 -246677764 + MADE1 DNA Mariner 10 78 -2 346 252 48 29 chr2 6578821 6578924 -246677659 - L2 LINE L2 -36 3277 3173 196 320 39 39 chr2 6579232 6579410 -246677173 - L2 LINE L2 -578 2736 2559 295 233 63 47 chr2 6579709 6579795 -246676788 - MIR3 SINE MIR -53 155 68 28 0 0 0 chr2 6579863 6579891 -246676692 + AT_rich Low_complexity Low_complexity 1 28 0 299 333 9 0 chr2 6580753 6580858 -246675725 + MIR3 SINE MIR 67 172 -36 2195 112 0 3 chr2 6581375 6581670 -246674913 + AluSc SINE Alu 1 294 -15 2332 95 0 20 chr2 6582340 6582645 -246673938 + AluSg SINE Alu 1 299 -11 192 252 9 17 chr2 6582963 6583078 -246673505 + GA-rich Low_complexity Low_complexity 4 117 0 401 205 53 76 chr2 6583082 6583253 -246673330 + HAL1 LINE L1 1011 1177 -1330 819 284 192 15 chr2 6583285 6583743 -246672840 + L1ME1 LINE L1 36 574 -5822 1225 265 86 52 chr2 6583761 6584912 -246671671 + L1ME1 LINE L1 1091 6230 -5 337 159 63 0 chr2 6585565 6585628 -246670955 - MLT1A2 LTR MaLR 0 390 324 586 228 124 0 chr2 6585638 6585783 -246670800 + FRAM SINE Alu 4 166 0 562 250 6 6 chr2 6585783 6585963 -246670620 + GA-rich Low_complexity Low_complexity 1 180 0 519 227 4 9 chr2 6585986 6586134 -246670449 - MLT1A2 LTR MaLR -56 372 192 750 219 21 42 chr2 6586184 6586376 -246670207 - MLT1A2 LTR MaLR -186 188 1 392 269 85 28 chr2 6586472 6586737 -246669846 - L1ME LINE L1 -4685 1576 1107 1594 223 77 12 chr2 6586752 6587183 -246669400 - MLT1C LTR MaLR 0 467 1 2111 273 82 26 chr2 6587183 6588336 -246668247 - L1ME LINE L1 -4846 1234 14 568 309 73 25 chr2 6588987 6589379 -246667204 - MLT1J LTR MaLR -45 466 13 279 0 0 0 chr2 6589736 6589767 -246666816 + (CA)n Simple_repeat Simple_repeat 2 32 0 359 318 0 0 chr2 6589768 6589875 -246666708 - MER5B DNA MER1_type -71 107 1 1027 142 0 0 chr2 6590279 6590434 -246666149 - AluSx SINE Alu -1 311 157 585 111 0 0 chr2 6590434 6590515 -246666068 - AluSx SINE Alu -231 82 2 1962 146 7 0 chr2 6590547 6590850 -246665733 + AluJb SINE Alu 1 305 0 313 176 110 11 chr2 6590934 6591025 -246665558 - MLT1J LTR MaLR -38 473 374 32544 218 19 16 chr2 6591060 6599486 -246657097 - HUERS-P3 LTR ERV1 -224 8695 259 484 138 11 53 chr2 6599490 6599584 -246656999 - HUERS-P3 LTR ERV1 -6905 91 2 4856 136 44 3 chr2 6599602 6600361 -246656222 - LTR25 LTR ERV1 0 794 1 191 256 0 23 chr2 6601406 6601449 -246655134 - MIR3 SINE MIR -24 184 143 563 290 43 0 chr2 6602860 6603022 -246653561 - MIR SINE MIR -2 260 92 529 318 23 9 chr2 6603194 6603411 -246653172 + MIR SINE MIR 5 224 -38 259 368 48 0 chr2 6603605 6603730 -246652853 + MIR SINE MIR 20 150 -112 186 302 83 0 chr2 6603846 6603942 -246652641 - MIR SINE MIR -76 132 29 35 63 0 0 chr2 6604505 6604568 -246652015 + AT_rich Low_complexity Low_complexity 1 63 0 2292 112 0 0 chr2 6605650 6605946 -246650637 - AluSx SINE Alu -16 296 1 2264 54 0 0 chr2 6606355 6606615 -246649968 + AluY SINE Alu 39 298 -13 233 226 10 98 chr2 6607489 6607591 -246648992 - MIR SINE MIR -59 203 111 1641 134 130 88 chr2 6607741 6607788 -246648795 + MSTA LTR MaLR 3 47 -381 583 88 0 0 chr2 6607788 6607868 -246648715 - MADE1 DNA Mariner 0 80 1 1641 134 130 88 chr2 6607868 6608229 -246648354 + MSTA LTR MaLR 47 428 0 185 297 20 68 chr2 6608388 6608536 -246648047 + L2 LINE L2 2560 2700 -614 804 290 30 32 chr2 6608670 6609241 -246647342 + L1ME3A LINE L1 5458 6157 -13 318 295 29 7 chr2 6609550 6609689 -246646894 - L1ME LINE L1 -351 5811 5670 1500 162 63 36 chr2 6610011 6610314 -246646269 - AluJo SINE Alu -1 311 1 2234 65 7 4 chr2 6610322 6610597 -246645986 - AluY SINE Alu -1 310 35 393 290 59 6 chr2 6610619 6610788 -246645795 + L2 LINE L2 2698 2875 -439 434 287 28 85 chr2 6610923 6611156 -246645427 + L2 LINE L2 3009 3254 -59 2131 140 79 15 chr2 6611156 6611498 -246645085 + THE1B LTR MaLR 1 364 0 11882 89 11 1 chr2 6611498 6613061 -246643522 + THE1B-int LTR MaLR 1 1579 -1 2245 117 73 15 chr2 6613064 6613406 -246643177 + THE1B LTR MaLR 3 364 0 434 287 28 85 chr2 6613406 6613484 -246643099 + L2 LINE L2 3255 3307 -6 248 212 91 30 chr2 6613529 6613628 -246642955 + MIR SINE MIR 60 164 -98 324 48 0 0 chr2 6613790 6613832 -246642751 + (CA)n Simple_repeat Simple_repeat 2 43 0 341 288 108 42 chr2 6614899 6615139 -246641444 - MIR SINE MIR 0 262 7 287 340 22 55 chr2 6615677 6615948 -246640635 + L2 LINE L2 2834 3095 -177 244 203 0 47 chr2 6615994 6616058 -246640525 + L2 LINE L2 3187 3247 -25 595 284 85 21 chr2 6616822 6617058 -246639525 - MIR SINE MIR -11 251 1 21 57 0 0 chr2 6618113 6618148 -246638435 + GC_rich Low_complexity Low_complexity 1 35 0 514 265 110 82 chr2 6619199 6619689 -246636894 + Tigger8 DNA MER2_type 63 566 -100 1784 203 12 50 chr2 6619866 6620270 -246636313 - MLT1B LTR MaLR 0 390 2 393 261 130 52 chr2 6620890 6621213 -246635370 + L1M3 LINE L1 3103 3444 -2702 615 314 51 46 chr2 6621650 6622042 -246634541 + MER68 LTR ERV1 156 549 -13 180 111 0 0 chr2 6622047 6622074 -246634509 + (CA)n Simple_repeat Simple_repeat 1 27 0 500 230 100 53 chr2 6622192 6622441 -246634142 + L1M3 LINE L1 5183 5440 -728 2545 188 46 0 chr2 6622469 6622922 -246633661 + MER101 LTR ERV1 1 474 0 1948 174 43 57 chr2 6624093 6624589 -246631994 + MER31-int LTR ERV1 815 3120 -3211 567 270 56 30 chr2 6624520 6624790 -246631793 + LTR57-int LTR ERVL 1234 1510 -3833 * 473 263 71 25 chr2 6624832 6625030 -246631553 + MER31-int LTR ERV1 1711 1917 -3019 1223 188 32 73 chr2 6625118 6625624 -246630959 + MER31-int LTR ERV1 2052 3835 -2428 901 143 20 51 chr2 6625768 6625964 -246630619 + MER31-int LTR ERV1 3541 3730 -2868 1288 201 98 81 chr2 6626044 6626624 -246629959 + MER31-int LTR ERV1 3287 3501 -1514 2732 150 11 23 chr2 6626624 6627057 -246629526 + MSTA LTR MaLR 1 428 0 1288 201 98 81 chr2 6627057 6627644 -246628939 + MER31-int LTR ERV1 3501 4077 -938 262 169 56 61 chr2 6627665 6627813 -246628770 + MER31-int LTR ERV1 5200 5397 -934 534 229 21 21 chr2 6627822 6627966 -246628617 + MER31-int LTR ERV1 4259 4402 -534 381 305 71 38 chr2 6629437 6629649 -246626934 - MIR SINE MIR -6 256 35 942 260 66 3 chr2 6631569 6631857 -246624726 - L1ME3A LINE L1 -2 6168 5863 204 310 150 0 chr2 6631889 6631989 -246624594 + L2 LINE L2 2541 2655 -659 204 315 14 27 chr2 6632435 6632508 -246624075 + L2 LINE L2 3201 3272 0 330 275 62 83 chr2 6632538 6632730 -246623853 + MIR SINE MIR 19 204 -58 30 45 0 0 chr2 6632745 6632789 -246623794 + AT_rich Low_complexity Low_complexity 1 44 0 4176 113 28 2 chr2 6632904 6633469 -246623114 - LTR19B LTR ERV1 0 580 1 53 0 0 0 chr2 6633498 6633551 -246623032 + AT_rich Low_complexity Low_complexity 1 53 0 267 224 24 88 chr2 6633966 6634091 -246622492 + MER94 DNA DNA 1 117 -17 331 331 63 0 chr2 6634131 6634273 -246622310 + MIR SINE MIR 46 196 -66 340 294 133 45 chr2 6634655 6634941 -246621642 + HAL1 LINE L1 593 903 -1604 1228 275 144 29 chr2 6634942 6635690 -246620893 + HAL1 LINE L1 928 1761 -746 253 141 109 43 chr2 6635782 6635874 -246620709 + LTR33A LTR ERVL 360 457 -66 231 316 59 59 chr2 6636551 6636687 -246619896 + MER5B DNA MER1_type 43 178 0 23 54 0 0 chr2 6637564 6637601 -246618982 + AT_rich Low_complexity Low_complexity 1 37 0 750 316 56 22 chr2 6637716 6638039 -246618544 - MER68 LTR ERV1 0 562 229 202 331 8 58 chr2 6640705 6640826 -246615757 - L2 LINE L2 -223 3049 2935 22 56 0 0 chr2 6643791 6643827 -246612756 + AT_rich Low_complexity Low_complexity 1 36 0 293 305 102 11 chr2 6643993 6644180 -246612403 + L1ME LINE L1 5518 5721 -400 2390 75 3 0 chr2 6644182 6644506 -246612077 + AluY SINE Alu 1 311 0 22 0 0 0 chr2 6645069 6645091 -246611492 + AT_rich Low_complexity Low_complexity 1 22 0 197 306 124 16 chr2 6645122 6645243 -246611340 - MIR SINE MIR -10 252 119 394 197 271 0 chr2 6645330 6645452 -246611131 - MER5A DNA MER1_type -7 182 28 1143 252 72 6 chr2 6645496 6645814 -246610769 + MER58B DNA MER1_type 2 340 -1 23 33 0 0 chr2 6646418 6646448 -246610135 + AT_rich Low_complexity Low_complexity 1 30 0 1387 188 90 10 chr2 6647155 6647443 -246609140 - AluJb SINE Alu -1 311 1 205 156 0 0 chr2 6648007 6648039 -246608544 + (CATG)n Simple_repeat Simple_repeat 3 34 0 2211 99 10 0 chr2 6650419 6650711 -246605872 + AluSg SINE Alu 6 300 -10 186 71 0 0 chr2 6650978 6651006 -246605577 + (CCA)n Simple_repeat Simple_repeat 2 29 0 206 196 18 18 chr2 6651466 6651522 -246605061 + (TATATG)n Simple_repeat Simple_repeat 1 56 0 32593 109 7 59 chr2 6651522 6657206 -246599377 - L1PA7 LINE L1 -12 6142 843 2234 129 0 0 chr2 6657206 6657516 -246599067 - AluSg SINE Alu 0 310 1 32593 109 7 59 chr2 6657516 6658307 -246598276 - L1PA7 LINE L1 -5311 843 12 310 230 111 0 chr2 6658430 6658565 -246598018 - L1ME4a LINE L1 0 6121 5972 495 0 0 0 chr2 6658838 6658893 -246597690 + (CA)n Simple_repeat Simple_repeat 2 56 0 1300 234 101 3 chr2 6659242 6659579 -246597004 - MLT1A2 LTR MaLR -4 370 1 198 187 103 14 chr2 6660263 6660328 -246596255 + MIR SINE MIR 82 214 -48 235 433 55 16 chr2 6660598 6660725 -246595858 - L2 LINE L2 -18 3254 3123 2443 117 6 6 chr2 6660910 6661260 -246595323 + L1PB1 LINE L1 5801 6150 -1 281 328 41 16 chr2 6662268 6662390 -246594193 - MIR SINE MIR -34 228 104 297 0 0 0 chr2 6663049 6663082 -246593501 + (TG)n Simple_repeat Simple_repeat 2 34 0 310 269 13 0 chr2 6663485 6663563 -246593020 - LTR16A LTR ERVL 0 450 372 298 210 25 25 chr2 6664266 6664347 -246592236 - MLT1J1 LTR MaLR -2 444 364 255 367 0 0 chr2 6664819 6664898 -246591685 + MIR3 SINE MIR 109 187 -21 252 313 111 0 chr2 6664970 6665069 -246591514 - L2 LINE L2 -1 3271 3162 2809 143 22 13 chr2 6665219 6665307 -246591276 - MLT1C LTR MaLR 0 467 381 2475 157 80 46 chr2 6665307 6665347 -246591236 - MLT2B2 LTR ERVL 0 515 478 415 32 16 16 chr2 6665347 6665409 -246591174 + (TAGA)n Simple_repeat Simple_repeat 2 63 0 2475 157 80 46 chr2 6665409 6665866 -246590717 - MLT2B2 LTR ERVL -37 478 1 2809 143 22 13 chr2 6665866 6666226 -246590357 - MLT1C LTR MaLR -86 381 15 2529 110 42 14 chr2 6666452 6666806 -246589777 - THE1B LTR MaLR 0 364 1 21 0 0 0 chr2 6667122 6667143 -246589440 + AT_rich Low_complexity Low_complexity 1 21 0 2405 83 6 3 chr2 6667218 6667530 -246589053 - AluSp SINE Alu 0 313 1 197 194 0 0 chr2 6667963 6667999 -246588584 - MIR SINE MIR -9 253 218 810 238 0 0 chr2 6668998 6669166 -246587417 - AluJb SINE Alu -14 298 131 412 271 142 7 chr2 6669167 6669322 -246587261 - MIR SINE MIR -69 193 18 34 84 0 0 chr2 6670005 6670088 -246586495 + GC_rich Low_complexity Low_complexity 1 83 0 22 70 0 0 chr2 6670195 6670238 -246586345 + GC_rich Low_complexity Low_complexity 1 43 0 2650 152 11 2 chr2 6670416 6670857 -246585726 - L1PB4 LINE L1 -318 5838 5394 367 23 0 0 chr2 6671162 6671205 -246585378 + (TTTA)n Simple_repeat Simple_repeat 2 176 0 1451 163 50 50 chr2 6671205 6671487 -246585096 - AluJo SINE Alu -28 284 3 201 319 87 0 chr2 6672638 6672707 -246583876 - MER91C DNA MER1_type -47 93 19 887 206 0 0 chr2 6672752 6672907 -246583676 + AluJb SINE Alu 127 281 -31 346 247 103 0 chr2 6673606 6673703 -246582880 - L2 LINE L2 -12 3260 3154 660 315 94 44 chr2 6674764 6675757 -246580826 - L2 LINE L2 -16 3297 2191 953 43 0 0 chr2 6675830 6675947 -246580636 + L1PA13 LINE L1 6041 6157 -6 1584 210 127 50 chr2 6676435 6676916 -246579667 + MLT2B1 LTR ERVL 1 518 -2 271 328 108 10 chr2 6679715 6679919 -246576664 + L1ME3A LINE L1 5567 5790 -2018 340 253 33 22 chr2 6680537 6680628 -246575955 - MIR SINE MIR -28 234 143 245 280 68 68 chr2 6680702 6680909 -246575674 + MLT1H LTR MaLR 130 336 -213 352 223 268 0 chr2 6680972 6681084 -246575499 - MIR SINE MIR -115 147 6 658 280 82 0 chr2 6681289 6681496 -246575087 + MER58A DNA MER1_type 1 224 0 335 115 0 0 chr2 6682020 6682072 -246574511 + MADE1 DNA Mariner 29 80 0 313 154 92 0 chr2 6682590 6682655 -246573928 + MER67A LTR ERV1 18 88 -455 1487 248 45 14 chr2 6682711 6683138 -246573445 + MER67A LTR ERV1 84 523 -20 257 303 50 10 chr2 6683251 6683350 -246573233 - MIR SINE MIR -59 203 101 357 390 39 18 chr2 6683779 6684061 -246572522 - L3 LINE CR1 -554 1023 736 530 289 70 18 chr2 6684791 6685133 -246571450 + L1M4 LINE L1 2201 2560 -3586 709 272 67 22 chr2 6685149 6685417 -246571166 + L1ME3A LINE L1 5859 6138 -32 630 316 201 5 chr2 6685606 6685980 -246570603 + L2 LINE L2 2867 3313 0 605 285 117 61 chr2 6687197 6687523 -246569060 + L2 LINE L2 2970 3313 0 26 0 0 0 chr2 6687613 6687639 -246568944 + AT_rich Low_complexity Low_complexity 1 26 0 266 280 75 19 chr2 6687712 6687819 -246568764 - MIR SINE MIR -142 120 8 420 37 0 0 chr2 6688493 6688547 -246568036 + (CA)n Simple_repeat Simple_repeat 2 55 0 370 368 0 0 chr2 6689541 6689666 -246566917 + MIR SINE MIR 22 146 -62 730 178 0 15 chr2 6689873 6690008 -246566575 + FLAM_C SINE Alu 1 133 0 528 156 33 25 chr2 6690013 6690135 -246566448 - MER53 DNA DNA -12 177 55 183 278 130 99 chr2 6691074 6691236 -246565347 + L3b LINE CR1 1337 1503 -80 234 364 78 31 chr2 6691282 6691411 -246565172 + MIR3 SINE MIR 11 145 -63 358 318 94 15 chr2 6691576 6691777 -246564806 + L3 LINE CR1 1361 1577 0 186 103 0 0 chr2 6691826 6691855 -246564728 + (TTTTTG)n Simple_repeat Simple_repeat 6 34 0 299 257 59 65 chr2 6692090 6692281 -246564302 + MIR SINE MIR 5 196 -65 183 80 0 0 chr2 6693915 6693940 -246562643 + (GA)n Simple_repeat Simple_repeat 2 26 0 180 344 0 0 chr2 6694125 6694189 -246562394 - MIR SINE MIR -129 133 70 653 169 92 23 chr2 6694192 6694322 -246562261 - MSTA LTR MaLR -234 141 3 407 349 31 15 chr2 6694335 6694662 -246561921 + L1M4 LINE L1 3826 4157 -1989 22 0 0 0 chr2 6694728 6694750 -246561833 + AT_rich Low_complexity Low_complexity 1 22 0 250 275 12 12 chr2 6694782 6694862 -246561721 - LTR33A LTR ERVL 0 523 444 655 286 43 22 chr2 6694866 6695142 -246561441 - MLT1C LTR MaLR 0 467 186 775 279 8 8 chr2 6695267 6695521 -246561062 - MLT1C LTR MaLR -213 254 1 25 0 0 0 chr2 6695922 6695947 -246560636 + AT_rich Low_complexity Low_complexity 1 25 0 320 329 32 4 chr2 6696096 6696342 -246560241 + L1ME3A LINE L1 5695 5947 -223 456 305 99 15 chr2 6698019 6698281 -246558302 - LTR16A LTR ERVL -14 436 153 952 285 119 34 chr2 6698307 6699023 -246557560 + HAL1 LINE L1 979 1755 -752 1784 162 72 57 chr2 6699095 6699514 -246557069 - MSTB1 LTR MaLR -5 427 3 343 262 38 93 chr2 6699603 6699893 -246556690 + HAL1 LINE L1 1936 2209 -298 884 185 101 63 chr2 6700215 6700631 -246555952 + MLT1D LTR MaLR 22 505 0 286 228 114 74 chr2 6700982 6701131 -246555452 + MIR SINE MIR 19 173 -89 1816 166 3 0 chr2 6701677 6701960 -246554623 - AluJb SINE Alu -23 289 6 481 285 15 0 chr2 6702157 6702294 -246554289 + L3 LINE CR1 1201 1339 -238 300 328 25 25 chr2 6702685 6702807 -246553776 - MER5A DNA MER1_type -12 177 56 216 200 0 0 chr2 6703057 6703107 -246553476 + (TG)n Simple_repeat Simple_repeat 2 51 0 1531 264 27 2 chr2 6703107 6703632 -246552951 + L1MCa LINE L1 2371 2910 -3516 435 169 34 59 chr2 6703807 6703925 -246552658 - LTR67 LTR ERVL 0 557 443 2477 46 0 0 chr2 6705453 6705759 -246550824 - L1PA2 LINE L1 -7 6148 5843 319 87 0 0 chr2 6706146 6706192 -246550391 + MADE1 DNA Mariner 5 50 -30 921 160 30 5 chr2 6706200 6706835 -246549748 + (TCTA)n Simple_repeat Simple_repeat 1 651 0 402 21 0 0 chr2 6706856 6706903 -246549680 + (TG)n Simple_repeat Simple_repeat 2 48 0 275 338 163 0 chr2 6707457 6707617 -246548966 + MIR SINE MIR 77 262 0 21 36 0 0 chr2 6707901 6707929 -246548654 + AT_rich Low_complexity Low_complexity 1 28 0 335 312 22 14 chr2 6708050 6708188 -246548395 + MLT1J2 LTR MaLR 46 184 -266 967 247 54 30 chr2 6709267 6709672 -246546911 - L1M4 LINE L1 -2452 4192 3778 1146 237 28 59 chr2 6709688 6710043 -246546540 + MLT1A1 LTR MaLR 1 344 -21 614 244 0 0 chr2 6710041 6710160 -246546423 - MLT1A1 LTR MaLR -246 119 1 * 1086 242 93 8 chr2 6710229 6710444 -246546139 - L1M4 LINE L1 -2884 3760 3565 273 57 0 0 chr2 6710444 6710479 -246546104 + (TG)n Simple_repeat Simple_repeat 2 36 0 1086 242 93 8 chr2 6710479 6710767 -246545816 - L1M4 LINE L1 -3079 3565 3214 297 227 78 50 chr2 6710783 6710924 -246545659 - L1M4 LINE L1 -6381 161 17 189 74 0 0 chr2 6711837 6711864 -246544719 + (TAAAA)n Simple_repeat Simple_repeat 1 27 0 1025 213 115 20 chr2 6712186 6712439 -246544144 + AluJo SINE Alu 1 277 -35 1965 138 7 3 chr2 6712457 6712748 -246543835 + AluSx SINE Alu 1 292 -20 36 40 0 0 chr2 6712748 6712798 -246543785 + AT_rich Low_complexity Low_complexity 1 50 0 222 311 27 14 chr2 6713947 6714021 -246542562 - MIR SINE MIR -150 112 38 731 160 33 0 chr2 6714148 6714298 -246542285 + BC200 scRNA scRNA 1 155 -45 180 239 68 45 chr2 6715573 6715661 -246540922 - MIR SINE MIR -103 105 16 27 73 0 0 chr2 6715751 6715806 -246540777 + AT_rich Low_complexity Low_complexity 1 55 0 278 325 71 26 chr2 6717343 6717497 -246539086 + L2 LINE L2 2914 3074 -198 1101 30 8 8 chr2 6719155 6719286 -246537297 - AluY SINE Alu -180 131 1 286 326 56 41 chr2 6720256 6720452 -246536131 + MIR SINE MIR 35 233 -29 381 350 64 6 chr2 6720481 6720638 -246535945 - MIR SINE MIR -77 185 20 471 285 158 13 chr2 6720645 6720803 -246535780 - MER5A DNA MER1_type 0 189 9 223 93 0 74 chr2 6720899 6720953 -246535630 + (GGAGAA)n Simple_repeat Simple_repeat 2 51 0 227 315 56 11 chr2 6721324 6721413 -246535170 + MIR SINE MIR 118 210 -52 2004 205 117 16 chr2 6721413 6721916 -246534667 - MLT2B3 LTR ERVL 0 554 1 650 264 40 40 chr2 6722038 6722278 -246534305 - MIR SINE MIR -11 251 16 1781 133 96 37 chr2 6722861 6723215 -246533368 - THE1C LTR MaLR 0 375 1 1573 187 45 18 chr2 6723330 6723694 -246532889 + MLT1A1 LTR MaLR 3 467 0 232 241 24 60 chr2 6724680 6724763 -246531820 - MIR3 SINE MIR -11 197 118 260 250 80 10 chr2 6724813 6724913 -246531670 + MIR SINE MIR 81 187 -75 238 313 9 54 chr2 6724902 6725014 -246531569 + L2 LINE L2 3207 3313 0 * 205 306 106 12 chr2 6725070 6725155 -246531428 - MIR3 SINE MIR -102 106 14 334 253 42 0 chr2 6726259 6726354 -246530229 + MER94 DNA DNA 21 119 -15 281 153 0 56 chr2 6726641 6726713 -246529870 + L1PA16 LINE L1 6095 6162 -4 207 0 0 0 chr2 6727032 6727055 -246529528 + (TG)n Simple_repeat Simple_repeat 1 23 0 1788 146 19 45 chr2 6727356 6727733 -246528850 - THE1C LTR MaLR -8 367 1 1183 212 50 32 chr2 6727750 6728127 -246528456 + L1MC4 LINE L1 7044 7427 -615 696 215 10 40 chr2 6728121 6728321 -246528262 - L1MC4 LINE L1 -961 7081 6888 * 292 276 48 0 chr2 6728439 6728544 -246528039 - MIR3 SINE MIR -9 199 90 252 86 0 0 chr2 6729345 6729380 -246527203 + (T)n Simple_repeat Simple_repeat 1 35 0 2301 103 0 0 chr2 6730198 6730499 -246526084 + AluY SINE Alu 1 301 -10 2782 96 8 0 chr2 6730631 6731027 -246525556 - MLT2A2 LTR ERVL -53 400 2 224 318 95 84 chr2 6731590 6731769 -246524814 - L2 LINE L2 -36 3236 3056 370 323 40 56 chr2 6731992 6732254 -246524329 + MIR SINE MIR 9 261 -1 41 58 0 0 chr2 6732342 6732411 -246524172 + AT_rich Low_complexity Low_complexity 1 69 0 219 339 64 53 chr2 6733096 6733261 -246523322 - MIR SINE MIR -75 133 8 242 231 0 0 chr2 6733326 6733378 -246523205 + L2 LINE L2 3262 3313 0 373 118 0 24 chr2 6734615 6734700 -246521883 + (TA)n Simple_repeat Simple_repeat 2 84 0 401 0 20 0 chr2 6735238 6735287 -246521296 + (TG)n Simple_repeat Simple_repeat 2 51 0 215 260 80 30 chr2 6735725 6735825 -246520758 + MIR3 SINE MIR 93 197 -11 * 241 231 215 31 chr2 6735821 6735951 -246520632 - MIR SINE MIR -4 258 105 189 0 0 0 chr2 6736869 6736890 -246519693 + (TAA)n Simple_repeat Simple_repeat 2 22 0 28 0 0 0 chr2 6737515 6737543 -246519040 + AT_rich Low_complexity Low_complexity 1 28 0 798 245 20 0 chr2 6737569 6737765 -246518818 + L1ME1 LINE L1 5480 5679 -487 1099 153 0 10 chr2 6737769 6737971 -246518612 + L1PBa LINE L1 1 200 -6663 * 2496 129 35 18 chr2 6737945 6738454 -246518129 + L1PBa LINE L1 599 1159 -5704 9544 97 62 6 chr2 6738456 6740052 -246516531 + L1PBa LINE L1 1311 2996 -3866 812 212 16 11 chr2 6740052 6740241 -246516342 - LTR1 LTR ERV1 -593 192 3 13374 175 45 54 chr2 6740243 6743358 -246513225 - HUERS-P2 LTR ERV1 0 3088 2 2313 197 108 65 chr2 6743359 6744150 -246512433 - LTR1B LTR ERV1 0 826 2 5172 175 25 9 chr2 6744151 6745786 -246510797 + L1PB1 LINE L1 4132 5791 -360 207 143 57 29 chr2 6745801 6745906 -246510677 + (TA)n Simple_repeat Simple_repeat 1 108 0 434 45 45 30 chr2 6745944 6745998 -246510585 - L1PB1 LINE L1 -302 5849 5792 207 0 0 0 chr2 6745998 6746021 -246510562 + (TG)n Simple_repeat Simple_repeat 1 23 0 434 45 45 30 chr2 6746021 6746033 -246510550 - L1PB1 LINE L1 -359 5792 5782 455 127 70 14 chr2 6746050 6746315 -246510268 + (TA)n Simple_repeat Simple_repeat 1 250 -425 2713 63 11 8 chr2 6746315 6746679 -246509904 + L1PB1 LINE L1 5782 6146 -5 455 127 70 14 chr2 6746679 6746690 -246509893 + (TA)n Simple_repeat Simple_repeat 250 675 0 1159 249 95 19 chr2 6746696 6747169 -246509414 + L1ME1 LINE L1 5654 6162 -4 902 122 23 0 chr2 6747189 6747320 -246509263 + AluSx SINE Alu 1 134 -178 402 151 0 0 chr2 6747320 6747393 -246509190 + (TA)n Simple_repeat Simple_repeat 2 74 0 1093 141 0 40 chr2 6747396 6747573 -246509010 + AluSx SINE Alu 127 296 -16 249 33 0 0 chr2 6748258 6748288 -246508295 + (CA)n Simple_repeat Simple_repeat 1 30 0 215 288 38 0 chr2 6748590 6748670 -246507913 + (CAGA)n Simple_repeat Simple_repeat 2 84 0 296 291 50 64 chr2 6749316 6749457 -246507126 + L2 LINE L2 3134 3272 0 386 298 33 33 chr2 6750205 6750326 -246506257 - L2 LINE L2 -9 3304 3184 910 289 43 10 chr2 6750623 6750924 -246505659 + L2 LINE L2 1911 2221 -1093 313 306 20 14 chr2 6750943 6751090 -246505493 + L1MEc LINE L1 67 214 -6182 527 291 50 48 chr2 6751601 6751797 -246504786 + L1MEc LINE L1 658 852 -5353 2124 123 10 3 chr2 6751797 6752098 -246504485 + AluSq SINE Alu 1 303 -10 527 291 50 48 chr2 6752098 6752506 -246504077 + L1MEc LINE L1 852 1220 -4985 3364 138 57 7 chr2 6752543 6753158 -246503425 - Tigger4(Zombi) DNA MER2_type 0 2731 2086 504 152 235 38 chr2 6753155 6753287 -246503296 - Tigger4(Zombi) DNA MER2_type -2571 160 3 * 213 167 21 21 chr2 6753287 6753335 -246503248 + (CA)n Simple_repeat Simple_repeat 1 48 0 666 278 91 53 chr2 6753438 6753579 -246503004 + L1MEc LINE L1 1506 1640 -4756 832 207 5 0 chr2 6753579 6753767 -246502816 + L1MD1 LINE L1 6054 6242 0 666 278 91 53 chr2 6753767 6753951 -246502632 + L1MEc LINE L1 1640 1815 -4581 2133 142 0 0 chr2 6753951 6754260 -246502323 + AluSx SINE Alu 1 309 -3 666 278 91 53 chr2 6754260 6754713 -246501870 + L1MEc LINE L1 1815 2315 -4081 3891 239 84 18 chr2 6754758 6755815 -246500768 + L1M4b LINE L1 227 1353 -5506 2232 108 0 0 chr2 6755819 6756107 -246500476 + AluSc SINE Alu 1 288 -21 213 241 0 0 chr2 6756109 6756163 -246500420 + (TA)n Simple_repeat Simple_repeat 1 54 0 291 117 83 0 chr2 6756164 6756224 -246500359 + L1M4b LINE L1 1357 1421 -5438 321 159 0 0 chr2 6756424 6756487 -246500096 + (TG)n Simple_repeat Simple_repeat 1 63 0 21 36 0 0 chr2 6757362 6757390 -246499193 + AT_rich Low_complexity Low_complexity 1 28 0 197 377 85 31 chr2 6757574 6757704 -246498879 - MIR3 SINE MIR -6 202 66 3041 285 105 23 chr2 6758739 6758858 -246497725 + L1MB7 LINE L1 6 114 -6845 1868 148 65 0 chr2 6758858 6759149 -246497434 - AluSx SINE Alu -2 310 1 3041 285 105 23 chr2 6759149 6761250 -246495333 + L1MB7 LINE L1 114 2405 -4554 206 260 0 0 chr2 6761318 6761368 -246495215 + (TA)n Simple_repeat Simple_repeat 2 51 0 355 325 0 0 chr2 6761434 6761548 -246495035 - L1M4b LINE L1 -5344 1515 1402 2239 244 89 36 chr2 6761652 6762172 -246494411 + L1MB7 LINE L1 2560 3051 -3906 352 81 16 16 chr2 6762172 6762234 -246494349 + (TA)n Simple_repeat Simple_repeat 1 62 0 2239 244 89 36 chr2 6762234 6763133 -246493450 + L1MB7 LINE L1 3051 3999 -2958 1157 181 43 27 chr2 6763140 6763439 -246493144 + L1MA7 LINE L1 5988 6291 0 5193 229 77 26 chr2 6763468 6764843 -246491740 + L1MB7 LINE L1 4016 5319 -1676 234 0 0 0 chr2 6764843 6764869 -246491714 + (TC)n Simple_repeat Simple_repeat 1 26 0 * 240 100 0 0 chr2 6764868 6764908 -246491675 + (CA)n Simple_repeat Simple_repeat 1 40 0 5193 229 77 26 chr2 6764869 6766245 -246490338 + L1MB7 LINE L1 5319 6868 -127 3696 60 9 0 chr2 6766245 6766709 -246489874 - L1PA8 LINE L1 -4 6168 5701 358 196 0 0 chr2 6766709 6766801 -246489782 + L1MB8 LINE L1 6072 6163 -15 2091 155 63 24 chr2 6767047 6767460 -246489123 + MSTB1 LTR MaLR 4 432 0 24 0 0 0 chr2 6767902 6767926 -246488657 + AT_rich Low_complexity Low_complexity 1 24 0 198 314 65 46 chr2 6768275 6768428 -246488155 + MIR SINE MIR 81 236 -26 289 297 203 16 chr2 6768848 6769154 -246487429 - MLT1J1 LTR MaLR -24 422 60 207 0 0 0 chr2 6769412 6769435 -246487148 + (CA)n Simple_repeat Simple_repeat 2 24 0 216 0 0 0 chr2 6771028 6771052 -246485531 + (TC)n Simple_repeat Simple_repeat 1 24 0 * 252 0 0 0 chr2 6771051 6771079 -246485504 + (CA)n Simple_repeat Simple_repeat 1 28 0 195 42 0 0 chr2 6771078 6771102 -246485481 + (GA)n Simple_repeat Simple_repeat 2 25 0 * 23 0 0 0 chr2 6771684 6771707 -246484876 + AT_rich Low_complexity Low_complexity 1 23 0 2482 115 24 21 chr2 6772552 6772926 -246483657 + THE1C LTR MaLR 1 375 0 221 213 0 0 chr2 6775436 6775483 -246481100 + MER5B DNA MER1_type 130 176 -2 418 167 119 0 chr2 6775715 6775799 -246480784 + MER5A DNA MER1_type 13 106 -83 330 336 27 0 chr2 6775862 6775972 -246480611 + MER5B DNA MER1_type 1 113 -65 270 323 56 19 chr2 6778828 6778989 -246477594 + MIR SINE MIR 84 250 -12 * 756 318 25 8 chr2 6778933 6779178 -246477405 - MIR SINE MIR -6 256 8 1427 213 23 0 chr2 6779623 6779928 -246476655 - AluJo SINE Alu 0 312 1 248 367 92 0 chr2 6782026 6782135 -246474448 - L2 LINE L2 -1 3271 3153 507 305 46 6 chr2 6782774 6782948 -246473635 - MIR SINE MIR -16 246 66 290 237 237 5 chr2 6783395 6783614 -246472969 + LTR50 LTR ERVL 8 277 -518 436 243 221 30 chr2 6783668 6783931 -246472652 + LTR33A LTR ERVL 328 519 -4 1368 155 91 16 chr2 6784265 6784517 -246472066 - AluJb SINE Alu -16 296 26 349 278 0 0 chr2 6785156 6785228 -246471355 - MIR SINE MIR -92 116 45 752 258 42 24 chr2 6785321 6785383 -246471200 - MER58A DNA MER1_type -2203 217 158 2540 122 53 26 chr2 6785383 6785800 -246470783 - MSTA LTR MaLR 0 428 1 752 258 42 24 chr2 6785800 6785950 -246470633 - MER58A DNA MER1_type -2262 158 1 559 326 80 37 chr2 6785987 6786389 -246470194 - MLT1J LTR MaLR -57 454 36 191 111 0 0 chr2 6786649 6786676 -246469907 + MIR SINE MIR 118 144 -118 958 188 17 59 chr2 6788362 6788601 -246467982 + MSTB2 LTR MaLR 229 457 0 1243 197 55 108 chr2 6788647 6789028 -246467555 + MLT1A1 LTR MaLR 1 361 -4 244 361 56 13 chr2 6789739 6789879 -246466704 + MIR SINE MIR 16 155 -53 21 36 0 0 chr2 6790073 6790101 -246466482 + AT_rich Low_complexity Low_complexity 1 28 0 336 48 0 0 chr2 6790248 6790290 -246466293 + (GA)n Simple_repeat Simple_repeat 1 42 0 195 69 0 0 chr2 6793831 6793860 -246462723 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 198 316 93 14 chr2 6793987 6794126 -246462457 + L2 LINE L2 2672 2821 -493 31 44 0 0 chr2 6794803 6794848 -246461735 + AT_rich Low_complexity Low_complexity 1 45 0 434 303 35 40 chr2 6795465 6795599 -246460984 - L1ME LINE L1 -404 5717 5583 2130 189 18 10 chr2 6795599 6795986 -246460597 + MLT1B LTR MaLR 1 390 0 434 303 35 40 chr2 6795986 6796049 -246460534 - L1ME LINE L1 -538 5583 5521 1976 162 40 30 chr2 6796854 6797225 -246459358 + THE1C LTR MaLR 1 375 0 21 57 0 0 chr2 6797257 6797292 -246459291 + AT_rich Low_complexity Low_complexity 1 35 0 200 382 35 18 chr2 6797475 6797645 -246458938 + L2 LINE L2 2828 3000 -272 22 35 0 0 chr2 6797930 6797959 -246458624 + AT_rich Low_complexity Low_complexity 1 29 0 1820 226 11 6 chr2 6798025 6798388 -246458195 + MLT1A1 LTR MaLR 1 365 0 258 294 16 16 chr2 6798780 6798906 -246457677 + (TA)n Simple_repeat Simple_repeat 2 127 0 290 277 47 84 chr2 6799908 6800121 -246456462 + MIR SINE MIR 8 212 -50 1757 165 92 9 chr2 6800240 6800556 -246456027 + MER2 DNA MER2_type 2 343 -1 26 0 0 0 chr2 6801107 6801133 -246455450 + AT_rich Low_complexity Low_complexity 1 26 0 243 269 222 9 chr2 6801274 6801382 -246455201 + MIR SINE MIR 48 178 -84 4799 131 1 16 chr2 6801418 6802146 -246454437 - L1PA13 LINE L1 0 6163 5447 231 313 100 96 chr2 6802365 6802667 -246453916 - L2 LINE L2 -9 3304 2998 912 230 0 0 chr2 6802667 6802828 -246453755 + FRAM SINE Alu 1 161 -5 231 313 100 96 chr2 6802828 6803005 -246453578 - L2 LINE L2 -315 2998 2823 189 403 32 13 chr2 6803045 6803199 -246453384 - L2 LINE L2 -602 2712 2556 2137 130 0 3 chr2 6803804 6804112 -246452471 + AluSx SINE Alu 6 312 0 21 57 0 0 chr2 6804908 6804943 -246451640 + AT_rich Low_complexity Low_complexity 1 35 0 316 240 34 6 chr2 6805000 6805175 -246451408 + A-rich Low_complexity Low_complexity 1 180 0 4993 177 25 6 chr2 6805419 6806311 -246450272 + MER49 LTR ERV1 8 916 -7 213 65 0 0 chr2 6806895 6806926 -246449657 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 353 162 0 14 chr2 6807496 6807570 -246449013 + GA-rich Low_complexity Low_complexity 4 76 0 398 255 10 10 chr2 6807803 6807901 -246448682 - MIR SINE MIR -118 144 47 242 281 88 44 chr2 6808525 6808639 -246447944 - MIR SINE MIR -74 188 70 21 0 0 0 chr2 6809121 6809142 -246447441 + AT_rich Low_complexity Low_complexity 1 21 0 1196 182 0 85 chr2 6809185 6809443 -246447140 + AluJo SINE Alu 1 236 -76 1924 153 22 26 chr2 6810135 6810489 -246446094 + MLT2A2 LTR ERVL 3 309 -144 1169 133 0 6 chr2 6810579 6810760 -246445823 + MLT2A2 LTR ERVL 274 453 0 2392 50 0 3 chr2 6811747 6812053 -246444530 + AluY SINE Alu 1 305 0 416 322 94 59 chr2 6812307 6812763 -246443820 - MLT1K LTR MaLR 0 588 117 2253 96 0 3 chr2 6814237 6814530 -246442053 - AluY SINE Alu -19 292 1 2019 67 8 4 chr2 6815167 6815420 -246441163 - L1PA7 LINE L1 0 6154 5901 292 264 33 0 chr2 6815442 6815533 -246441050 - MER5A DNA MER1_type -95 94 1 246 62 0 0 chr2 6815680 6815712 -246440871 + (A)n Simple_repeat Simple_repeat 1 32 0 365 200 109 0 chr2 6816893 6817003 -246439580 - MER20 DNA MER1_type -95 124 3 1364 132 80 0 chr2 6817009 6817222 -246439361 + MER30 DNA MER1_type 1 230 0 216 194 45 0 chr2 6817315 6817449 -246439134 + (TG)n Simple_repeat Simple_repeat 2 141 0 218 191 23 30 chr2 6817536 6817667 -246438916 + (TG)n Simple_repeat Simple_repeat 2 131 0 541 150 22 28 chr2 6817678 6817858 -246438725 + (TG)n Simple_repeat Simple_repeat 1 179 0 431 204 39 6 chr2 6817880 6818197 -246438386 + (TG)n Simple_repeat Simple_repeat 1 327 0 188 339 73 24 chr2 6819051 6819102 -246437481 + MIR SINE MIR 101 148 -114 234 62 0 0 chr2 6819102 6819134 -246437449 + (TAA)n Simple_repeat Simple_repeat 1 32 0 188 339 73 24 chr2 6819134 6819206 -246437377 + MIR SINE MIR 148 230 -32 201 156 0 0 chr2 6820639 6820671 -246435912 + CT-rich Low_complexity Low_complexity 2 33 0 33 0 0 0 chr2 6821110 6821143 -246435440 + AT_rich Low_complexity Low_complexity 1 33 0 499 281 31 40 chr2 6823240 6823485 -246433098 - MIR SINE MIR -15 247 4 2255 101 3 0 chr2 6823727 6824014 -246432569 + AluSc SINE Alu 1 288 -21 25 51 0 0 chr2 6824827 6824866 -246431717 + AT_rich Low_complexity Low_complexity 1 39 0 1958 133 3 7 chr2 6824916 6825201 -246431382 + MER1B DNA MER1_type 43 326 -13 3617 255 115 52 chr2 6825252 6827351 -246429232 - Charlie7 DNA MER1_type -139 2473 243 1845 185 25 33 chr2 6827705 6828072 -246428511 - MLT1A1 LTR MaLR 0 365 2 263 361 31 0 chr2 6828581 6828711 -246427872 - MIR SINE MIR -50 212 79 229 320 82 0 chr2 6829327 6829449 -246427134 + MIR SINE MIR 76 207 -55 183 190 40 20 chr2 6830083 6830183 -246426400 + (CA)n Simple_repeat Simple_repeat 1 102 0 386 218 45 0 chr2 6830203 6830359 -246426224 + (CA)n Simple_repeat Simple_repeat 1 163 0 2129 195 20 66 chr2 6832856 6832906 -246423677 - MLT2B1 LTR ERVL -2 518 467 2424 123 22 6 chr2 6832906 6833264 -246423319 + THE1B LTR MaLR 1 364 0 2129 195 20 66 chr2 6833264 6833280 -246423303 - MLT2B1 LTR ERVL -53 467 452 512 43 29 0 chr2 6833280 6833350 -246423233 + (TAGA)n Simple_repeat Simple_repeat 2 73 0 2129 195 20 66 chr2 6833350 6833825 -246422758 - MLT2B1 LTR ERVL -68 452 1 2313 161 67 7 chr2 6834079 6834483 -246422100 + MSTA LTR MaLR 1 428 0 2040 179 82 131 chr2 6835200 6835961 -246420622 + LTR8A LTR ERV1 1 723 -4 1132 215 99 52 chr2 6836016 6836600 -246419983 + LTR48B LTR ERV1 1 644 0 448 270 68 0 chr2 6836633 6836781 -246419802 - MIR SINE MIR -101 161 4 24 0 0 0 chr2 6836928 6836952 -246419631 + AT_rich Low_complexity Low_complexity 1 24 0 1768 154 89 17 chr2 6837093 6837443 -246419140 + THE1C LTR MaLR 1 375 0 257 254 167 7 chr2 6838832 6838970 -246417613 + MIR SINE MIR 100 259 -3 300 296 57 0 chr2 6838994 6839082 -246417501 + MIR SINE MIR 91 183 -79 1789 162 6 34 chr2 6839128 6839449 -246417134 + AluJb SINE Alu 1 312 0 1493 127 18 9 chr2 6839449 6839825 -246416758 + AluSc SINE Alu 81 461 0 253 318 76 23 chr2 6841727 6841859 -246414724 + MIR SINE MIR 5 143 -119 410 264 47 27 chr2 6843036 6843184 -246413399 - MIR SINE MIR -47 215 65 257 217 87 0 chr2 6843238 6843307 -246413276 - MIR SINE MIR -70 192 118 231 291 13 0 chr2 6843465 6843544 -246413039 - MIR3 SINE MIR -5 203 124 653 224 22 49 chr2 6843660 6843843 -246412740 + MER58C DNA MER1_type 38 215 0 30 0 0 0 chr2 6843904 6843934 -246412649 + AT_rich Low_complexity Low_complexity 1 30 0 225 353 17 8 chr2 6843957 6844076 -246412507 + MER5B DNA MER1_type 54 173 -5 369 277 13 43 chr2 6847095 6847180 -246409403 + L1ME LINE L1 5510 5565 -556 1916 145 35 0 chr2 6847180 6847469 -246409114 - AluSx SINE Alu -13 299 1 369 277 13 43 chr2 6847469 6847540 -246409043 + L1ME LINE L1 5565 5637 -484 2289 217 39 41 chr2 6847569 6848229 -246408354 + L1M4c LINE L1 1238 1896 -4488 1547 103 0 0 chr2 6848235 6848429 -246408154 + AluSq SINE Alu 1 194 -119 2099 100 3 17 chr2 6848980 6849269 -246407314 - AluSg SINE Alu -23 287 3 1233 154 43 39 chr2 6849335 6849569 -246407014 - AluJo SINE Alu -23 289 55 306 0 0 0 chr2 6850290 6850324 -246406259 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 564 242 62 36 chr2 6851568 6851762 -246404821 + MIR SINE MIR 63 261 -1 332 333 39 6 chr2 6852850 6853030 -246403553 + MERVL LTR ERVL 2314 2499 -2986 1658 140 89 24 chr2 6853057 6853350 -246403233 + AluSx SINE Alu 1 312 0 1587 204 18 15 chr2 6853758 6854101 -246402482 + Tigger1 DNA MER2_type 1 344 -2074 416 333 75 5 chr2 6855111 6855324 -246401259 - MIR SINE MIR -25 237 10 225 0 0 0 chr2 6855809 6855834 -246400749 + (T)n Simple_repeat Simple_repeat 1 25 0 2295 134 35 13 chr2 6856124 6856519 -246400064 - Tigger1 DNA MER2_type 0 2418 2015 264 185 92 0 chr2 6856493 6856557 -246400026 - Tigger1 DNA MER2_type -1934 484 415 2237 107 12 9 chr2 6856557 6856885 -246399698 + THE1A LTR MaLR 1 329 -26 410 100 0 133 chr2 6856985 6857075 -246399508 + AluSg/x SINE Alu 216 293 -17 381 197 174 76 chr2 6858175 6858307 -246398276 - MER5A DNA MER1_type -32 157 13 193 314 128 0 chr2 6858646 6858732 -246397851 - MIR SINE MIR -64 144 48 22 0 0 0 chr2 6859536 6859558 -246397025 + AT_rich Low_complexity Low_complexity 1 22 0 2690 34 0 0 chr2 6859596 6859892 -246396691 - AluY SINE Alu -15 296 1 3305 145 41 38 chr2 6860490 6861003 -246395580 - L1MB2 LINE L1 -270 5901 5384 2367 99 3 0 chr2 6861003 6861305 -246395278 - AluSg SINE Alu -7 303 1 3305 145 41 38 chr2 6861305 6861431 -246395152 - L1MB2 LINE L1 -787 5384 5260 780 172 90 0 chr2 6861431 6861576 -246395007 - AluJb SINE Alu -9 303 146 1670 158 0 28 chr2 6861583 6861868 -246394715 - AluJb SINE Alu -23 289 13 910 239 18 5 chr2 6861872 6862094 -246394489 - L1MB2 LINE L1 -871 5275 5051 730 285 6 6 chr2 6862677 6862856 -246393727 - LTR28 LTR ERV1 -841 179 1 2401 241 41 58 chr2 6862903 6863038 -246393545 + L1M1 LINE L1 17 153 -7412 2542 36 3 10 chr2 6863038 6863345 -246393238 - AluYa5 SINE Alu -6 305 1 2401 241 41 58 chr2 6863345 6863945 -246392638 + L1M1 LINE L1 153 739 -6826 2522 227 39 9 chr2 6864059 6864701 -246391882 + L1MB5 LINE L1 5513 6173 -1 314 28 0 0 chr2 6865100 6865136 -246391447 + (TG)n Simple_repeat Simple_repeat 2 37 0 554 316 81 61 chr2 6866002 6866395 -246390188 + L3 LINE CR1 1079 1479 -98 1281 147 44 5 chr2 6867468 6867672 -246388911 + AluJb SINE Alu 1 212 -100 2249 112 3 0 chr2 6867672 6867968 -246388615 - AluSx SINE Alu -15 297 1 2118 125 3 3 chr2 6868587 6868884 -246387699 - AluSx SINE Alu -15 297 1 1262 204 91 18 chr2 6869527 6869802 -246386781 - AluJb SINE Alu -17 295 1 2131 86 47 0 chr2 6869941 6870219 -246386364 - AluSq SINE Alu -22 291 1 24 0 0 0 chr2 6870648 6870672 -246385911 + AT_rich Low_complexity Low_complexity 1 24 0 5543 60 7 3 chr2 6871097 6871816 -246384767 - L1PA4 LINE L1 -180 5975 5254 5252 71 4 3 chr2 6871823 6872523 -246384060 + L1P LINE L1 3888 4588 -1558 2160 96 20 20 chr2 6872860 6873161 -246383422 + AluSc SINE Alu 1 301 -8 1090 165 0 0 chr2 6873162 6873332 -246383251 + AluSg/x SINE Alu 133 302 -8 245 230 203 0 chr2 6873812 6873886 -246382697 + MLT1I LTR MaLR 223 311 -244 1460 68 16 5 chr2 6874035 6874226 -246382357 + AluY SINE Alu 103 295 -16 1547 180 34 24 chr2 6874852 6875147 -246381436 + AluJo SINE Alu 1 298 -14 897 265 32 13 chr2 6875150 6875459 -246381124 + L1M4 LINE L1 2209 2523 -3623 357 337 32 16 chr2 6875794 6875981 -246380602 - MLT1D-int LTR MaLR -490 881 692 2380 240 18 44 chr2 6876098 6876777 -246379806 - MLT1D-int LTR MaLR -710 661 1 1100 204 134 41 chr2 6876779 6877111 -246379472 - MLT1D LTR MaLR -2 503 150 1305 181 31 14 chr2 6877145 6877438 -246379145 - AluSx SINE Alu -9 303 6 505 103 0 51 chr2 6877760 6877838 -246378745 - AluJo SINE Alu -17 295 222 771 166 0 58 chr2 6877908 6878047 -246378536 + FLAM_C SINE Alu 1 131 -2 2288 110 0 3 chr2 6878235 6878545 -246378038 - AluSc SINE Alu 0 309 1 1171 150 87 5 chr2 6878563 6878770 -246377813 - AluJo SINE Alu -88 224 1 556 296 38 47 chr2 6880055 6880372 -246376211 + MER90 LTR ERV1 77 390 -185 677 244 43 82 chr2 6880410 6880738 -246375845 + L1M4 LINE L1 24 338 -6204 296 215 108 46 chr2 6881499 6881629 -246374954 + MIR SINE MIR 88 225 -37 2068 133 10 0 chr2 6881795 6882089 -246374494 - AluSg SINE Alu -13 297 1 40 67 0 0 chr2 6882180 6882255 -246374328 + AT_rich Low_complexity Low_complexity 1 75 0 306 253 0 0 chr2 6883139 6883218 -246373365 + MLT1I LTR MaLR 317 395 -14 236 169 135 34 chr2 6884864 6884953 -246371630 - L1PA11 LINE L1 0 6174 6077 2066 197 163 27 chr2 6884955 6885057 -246371526 - Charlie1 DNA MER1_type -353 2408 2321 2323 103 3 6 chr2 6885057 6885369 -246371214 - AluSx SINE Alu -1 311 1 2066 197 163 27 chr2 6885369 6885561 -246371022 - Charlie1 DNA MER1_type -440 2321 2157 2150 140 3 3 chr2 6885561 6885868 -246370715 - AluSx SINE Alu -5 307 1 2066 197 163 27 chr2 6885868 6886067 -246370516 - Charlie1 DNA MER1_type -604 2157 1987 2073 122 10 16 chr2 6886067 6886378 -246370205 - AluSx SINE Alu -3 309 1 2066 197 163 27 chr2 6886378 6886556 -246370027 - Charlie1 DNA MER1_type -774 1987 1643 259 154 0 0 chr2 6886657 6886696 -246369887 - Alu SINE Alu -261 39 1 314 262 267 11 chr2 6886931 6887109 -246369474 + MIR SINE MIR 4 228 -34 794 250 65 22 chr2 6887161 6887393 -246369190 + MIR SINE MIR 20 261 -1 220 214 61 102 chr2 6887426 6887482 -246369101 + MIR SINE MIR 158 215 -47 1853 163 3 0 chr2 6887482 6887764 -246368819 + AluSx SINE Alu 1 283 -29 198 0 0 0 chr2 6887765 6887787 -246368796 + (TTAA)n Simple_repeat Simple_repeat 4 25 0 220 214 61 102 chr2 6887787 6887826 -246368757 + MIR SINE MIR 214 251 -11 351 330 80 14 chr2 6888956 6889168 -246367415 + MIR SINE MIR 29 254 -8 2228 107 10 0 chr2 6889232 6889523 -246367060 - AluSq SINE Alu -19 294 1 2263 118 0 0 chr2 6890201 6890507 -246366076 - AluSx SINE Alu -6 306 1 2206 123 3 0 chr2 6892096 6892404 -246364179 - AluSx SINE Alu -3 309 1 192 97 0 0 chr2 6892964 6892995 -246363588 + (CAGAGA)n Simple_repeat Simple_repeat 1 31 0 2357 97 0 0 chr2 6893006 6893305 -246363278 - AluSg SINE Alu -11 299 1 24 67 0 0 chr2 6894045 6894090 -246362493 + AT_rich Low_complexity Low_complexity 1 45 0 1725 181 9 17 chr2 6894091 6894440 -246362143 - L1MA5 LINE L1 -174 6126 5781 2338 94 3 0 chr2 6894442 6894740 -246361843 - AluSx SINE Alu -13 299 1 530 309 87 17 chr2 6894882 6895112 -246361471 + MIR SINE MIR 14 259 -3 207 282 42 0 chr2 6895260 6895331 -246361252 + (TATATG)n Simple_repeat Simple_repeat 3 76 0 1345 148 145 28 chr2 6895592 6895916 -246360667 + L1MB5 LINE L1 5813 6174 0 248 252 84 37 chr2 6896077 6896184 -246360399 - L2 LINE L2 -862 2452 2341 408 214 143 9 chr2 6896366 6896478 -246360105 - MER94 DNA DNA -1 133 7 206 319 0 14 chr2 6896706 6896775 -246359808 - L3 LINE CR1 -1 1576 1509 23 0 0 0 chr2 6897743 6897766 -246358817 + AT_rich Low_complexity Low_complexity 1 23 0 43 20 0 0 chr2 6898241 6898291 -246358292 + AT_rich Low_complexity Low_complexity 1 50 0 2484 86 0 0 chr2 6899778 6900091 -246356492 + AluSq SINE Alu 1 313 0 760 289 50 11 chr2 6900104 6900384 -246356199 + HAL1 LINE L1 1637 1927 -580 530 281 105 4 chr2 6900620 6900848 -246355735 + HAL1 LINE L1 2050 2300 -207 25 0 0 0 chr2 6901622 6901647 -246354936 + AT_rich Low_complexity Low_complexity 1 25 0 2463 84 0 3 chr2 6902141 6902451 -246354132 + AluY SINE Alu 1 309 -2 249 161 0 54 chr2 6904917 6904973 -246351610 - MER5B DNA MER1_type 0 178 126 2092 136 10 3 chr2 6904982 6905292 -246351291 + AluSx SINE Alu 1 312 0 1333 143 39 54 chr2 6906312 6906592 -246349991 - AluJo SINE Alu -4 308 33 325 277 195 56 chr2 6906986 6907158 -246349425 - L1M2 LINE L1 -5446 1403 1256 182 36 0 36 chr2 6907158 6907186 -246349397 + (CCCTG)n Simple_repeat Simple_repeat 4 30 0 325 277 195 56 chr2 6907186 6907496 -246349087 - L1M2 LINE L1 -5593 1256 854 2497 30 40 0 chr2 6907792 6908088 -246348495 + AluY SINE Alu 1 308 -3 259 253 148 44 chr2 6908725 6908907 -246347676 - L2 LINE L2 -467 2847 2647 233 333 10 30 chr2 6910178 6910277 -246346306 + MIR3 SINE MIR 78 174 -34 253 331 37 22 chr2 6910753 6910889 -246345694 - MIR SINE MIR -77 185 48 205 318 27 87 chr2 6910897 6911196 -246345387 - L2 LINE L2 -82 3190 2910 2499 77 0 0 chr2 6911923 6912234 -246344349 - AluY SINE Alu 0 311 1 718 223 99 21 chr2 6914940 6915173 -246341410 - MLT1C LTR MaLR -213 254 4 180 77 0 0 chr2 6915181 6915207 -246341376 + (CA)n Simple_repeat Simple_repeat 1 26 0 335 256 116 43 chr2 6915275 6915531 -246341052 - MLT1L LTR MaLR -7 608 235 313 246 25 68 chr2 6915904 6916022 -246340561 + L2 LINE L2 3156 3268 -4 180 296 0 0 chr2 6916471 6916515 -246340068 - L2 LINE L2 -12 3301 3258 1155 196 107 0 chr2 6916911 6917181 -246339402 + MER33 DNA MER1_type 5 303 -21 184 286 131 12 chr2 6917579 6917663 -246338920 + L2 LINE L2 2519 2612 -702 21 36 0 0 chr2 6918801 6918829 -246337754 + AT_rich Low_complexity Low_complexity 1 28 0 256 176 14 14 chr2 6919834 6919908 -246336675 + (TA)n Simple_repeat Simple_repeat 1 74 0 1924 163 0 7 chr2 6919909 6920204 -246336379 - AluJb SINE Alu -19 293 1 186 324 9 72 chr2 6920563 6920674 -246335909 + MIR SINE MIR 105 208 -54 2233 247 40 16 chr2 6920991 6921724 -246334859 - L1M4 LINE L1 -3250 2896 2147 22 0 0 0 chr2 6922984 6923006 -246333577 + AT_rich Low_complexity Low_complexity 1 22 0 665 281 85 68 chr2 6923042 6923700 -246332883 - L1MC4a LINE L1 -1885 5923 5255 262 214 306 0 chr2 6924084 6924182 -246332401 + MIR SINE MIR 15 142 -120 701 289 100 39 chr2 6924279 6924719 -246331864 + L2 LINE L2 438 904 -2410 221 279 132 37 chr2 6924719 6924855 -246331728 + L2 LINE L2 2051 2199 -1115 245 291 35 64 chr2 6925202 6925343 -246331240 + L2 LINE L2 2435 2571 -743 340 283 168 29 chr2 6925438 6925611 -246330972 + L2 LINE L2 2960 3156 -157 245 233 0 23 chr2 6925611 6925697 -246330886 + (CATA)n Simple_repeat Simple_repeat 4 87 0 378 0 0 0 chr2 6926153 6926195 -246330388 + (TG)n Simple_repeat Simple_repeat 2 43 0 233 0 62 0 chr2 6927535 6927567 -246329016 + (TCCCC)n Simple_repeat Simple_repeat 2 35 0 2391 78 10 0 chr2 6927567 6927862 -246328721 - AluSq SINE Alu -15 298 1 4578 205 40 24 chr2 6927872 6929653 -246326930 - L1MB7 LINE L1 -1 6419 4619 394 290 120 4 chr2 6929646 6929922 -246326661 - L1MB7 LINE L1 -3898 2486 2179 * 196 247 124 21 chr2 6930756 6930853 -246325730 - L2 LINE L2 -4 3268 3162 428 273 132 18 chr2 6931006 6931435 -246325148 - L2 LINE L2 -219 3094 2615 1628 297 163 31 chr2 6931702 6932018 -246324565 - L2 LINE L2 -653 2661 2388 2200 112 0 0 chr2 6932018 6932303 -246324280 + AluSq SINE Alu 1 285 -28 1628 297 163 31 chr2 6932303 6933577 -246323006 - L2 LINE L2 -926 2388 861 195 42 0 0 chr2 6934311 6934335 -246322248 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2037 232 142 79 chr2 6935407 6936849 -246319734 + Charlie2a DNA MER1_type 1079 2611 -251 278 281 31 23 chr2 6936913 6937041 -246319542 + Charlie2a DNA MER1_type 2718 2846 -16 191 371 95 0 chr2 6937803 6937908 -246318675 - MIR SINE MIR -60 148 34 231 114 0 0 chr2 6938690 6938725 -246317858 + (TCCCC)n Simple_repeat Simple_repeat 4 38 0 25 0 0 0 chr2 6939137 6939162 -246317421 + AT_rich Low_complexity Low_complexity 1 25 0 213 171 24 0 chr2 6939243 6939284 -246317299 + (TTA)n Simple_repeat Simple_repeat 2 43 0 1414 277 110 76 chr2 6939638 6942459 -246314124 - L1ME3 LINE L1 -290 5876 2892 2205 99 0 7 chr2 6942459 6942752 -246313831 + AluSq SINE Alu 1 291 -22 1414 277 110 76 chr2 6942752 6943432 -246313151 - L1ME3 LINE L1 -3274 2892 2237 1599 228 40 33 chr2 6948754 6949179 -246307404 - MSTC LTR MaLR 0 428 1 216 97 0 0 chr2 6950273 6950304 -246306279 + (TG)n Simple_repeat Simple_repeat 2 32 0 1514 223 66 85 chr2 6951242 6951866 -246304717 - LTR9 LTR ERV1 0 612 1 215 267 0 33 chr2 6952951 6953011 -246303572 + CT-rich Low_complexity Low_complexity 5 62 0 6920 31 8 0 chr2 6953491 6954295 -246302288 + L1PA3 LINE L1 5344 6153 -2 564 230 129 42 chr2 6956826 6957113 -246299470 + LTR16C LTR ERVL 180 491 0 1867 180 22 65 chr2 6958494 6958895 -246297688 + MLT1B LTR MaLR 1 384 -6 1657 153 65 48 chr2 6958907 6959076 -246297507 + MER46B DNA MER2_type 1 166 -2565 2261 94 10 0 chr2 6959076 6959375 -246297208 - AluY SINE Alu -9 302 1 1657 153 65 48 chr2 6959375 6959462 -246297121 + MER46B DNA MER2_type 166 143 -2588 2314 119 19 35 chr2 6959462 6959832 -246296751 + THE1B LTR MaLR 1 364 0 1657 153 65 48 chr2 6959832 6959926 -246296657 + MER46B DNA MER2_type 142 233 -3 287 314 44 0 chr2 6959929 6960066 -246296517 - MIR SINE MIR -108 154 12 565 254 38 34 chr2 6962253 6962462 -246294121 + MIR SINE MIR 15 224 -38 901 254 28 0 chr2 6963053 6963270 -246293313 + MER58A DNA MER1_type 2 224 0 497 226 161 30 chr2 6963612 6963842 -246292741 + MIR SINE MIR 3 262 0 24 0 0 0 chr2 6964149 6964173 -246292410 + AT_rich Low_complexity Low_complexity 1 24 0 2026 131 66 26 chr2 6964370 6964720 -246291863 - THE1B LTR MaLR 0 364 1 1779 174 0 10 chr2 6964856 6965155 -246291428 + AluJb SINE Alu 1 296 -16 1327 256 125 17 chr2 6965195 6965676 -246290907 - L1MC4a LINE L1 -1883 5925 5393 189 136 16 56 chr2 6965873 6965998 -246290585 + (TA)n Simple_repeat Simple_repeat 1 120 0 270 294 59 54 chr2 6966253 6966518 -246290065 - L1MC/D LINE L1 -446 5675 5444 225 356 8 0 chr2 6966519 6966637 -246289946 - MIR SINE MIR -57 151 33 317 267 50 69 chr2 6967006 6967208 -246289375 - L2 LINE L2 -5 3308 3111 299 343 20 0 chr2 6969030 6969132 -246287451 + MIR SINE MIR 47 150 -112 1599 164 60 38 chr2 6969140 6969505 -246287078 - THE1C LTR MaLR 0 375 3 9681 130 12 38 chr2 6969507 6971127 -246285456 - THE1C-int LTR MaLR 0 1580 3 1756 151 37 45 chr2 6971129 6971507 -246285076 - THE1C LTR MaLR 0 375 1 462 303 77 27 chr2 6973114 6973375 -246283208 + L2 LINE L2 2372 2645 -669 360 313 28 33 chr2 6973420 6973602 -246282981 + L2 LINE L2 3094 3274 -39 2452 90 0 3 chr2 6973606 6973917 -246282666 - AluSg SINE Alu 0 310 1 180 0 0 0 chr2 6974586 6974606 -246281977 + (T)n Simple_repeat Simple_repeat 1 20 0 2342 83 0 7 chr2 6974986 6975286 -246281297 - AluY SINE Alu -13 298 1 234 327 27 9 chr2 6975459 6975569 -246281014 - MIR SINE MIR -55 153 42 1660 212 87 2 chr2 6977480 6977895 -246278688 - L1MC3 LINE L1 -28 7757 7308 243 197 57 90 chr2 6978014 6978136 -246278447 - MLT1F1 LTR MaLR -437 130 13 3414 208 91 26 chr2 6978162 6979183 -246277400 - L1MC3 LINE L1 -947 7048 5893 590 217 71 11 chr2 6979198 6979382 -246277201 - L1MC1 LINE L1 -5 6328 6134 1028 205 29 29 chr2 6979389 6979662 -246276921 - MLT1A2 LTR MaLR -5 369 97 348 24 0 0 chr2 6979698 6979739 -246276844 + (CA)n Simple_repeat Simple_repeat 2 42 0 287 78 69 29 chr2 6979743 6979845 -246276738 + (TA)n Simple_repeat Simple_repeat 1 106 0 297 0 0 0 chr2 6979860 6979893 -246276690 + (CA)n Simple_repeat Simple_repeat 2 34 0 225 240 133 27 chr2 6979919 6979994 -246276589 - MLT1A2 LTR MaLR -304 86 4 2620 174 30 8 chr2 6979994 6980524 -246276059 - L1MC1 LINE L1 -196 6137 5590 397 296 18 41 chr2 6980865 6981034 -246275549 + MIR SINE MIR 67 231 -31 331 135 29 144 chr2 6981045 6981149 -246275434 - L1MC4 LINE L1 -1341 6981 1980 598 257 27 48 chr2 6981478 6981665 -246274918 - MER5A DNA MER1_type 0 189 7 205 315 36 45 chr2 6983323 6983434 -246273149 - MIR SINE MIR -97 111 2 2011 156 77 31 chr2 6984653 6985168 -246271415 - MLT2A2 LTR ERVL 0 554 1 339 263 135 0 chr2 6985181 6985314 -246271269 - MIR SINE MIR -14 248 98 1902 105 4 8 chr2 6985800 6986058 -246270525 + AluSc SINE Alu 39 295 -14 1641 149 39 41 chr2 6987040 6987403 -246269180 + L1MA9 LINE L1 5950 6311 -1 198 263 100 50 chr2 6987770 6987850 -246268733 + L2 LINE L2 3169 3252 -20 310 229 280 8 chr2 6988863 6988981 -246267602 + MIR SINE MIR 20 169 -93 205 151 38 0 chr2 6990114 6990167 -246266416 + (TA)n Simple_repeat Simple_repeat 1 55 0 2483 88 0 0 chr2 6990308 6990614 -246265969 + AluSq SINE Alu 1 306 -7 225 0 73 24 chr2 6990632 6990673 -246265910 + (TAAAA)n Simple_repeat Simple_repeat 3 45 0 2076 153 0 0 chr2 6990687 6990988 -246265595 + AluJo SINE Alu 3 303 -9 442 256 125 57 chr2 6991119 6991295 -246265288 + MIR SINE MIR 49 236 -26 215 294 147 71 chr2 6991531 6991769 -246264814 - L2 LINE L2 0 3272 3017 461 212 30 0 chr2 6991906 6992005 -246264578 + Tigger3b DNA MER2_type 1 102 -1129 * 4199 130 50 84 chr2 6992003 6992994 -246263589 + Tigger3b DNA MER2_type 274 1231 0 261 256 60 51 chr2 6993257 6993374 -246263209 + MIR3 SINE MIR 52 169 -39 284 358 73 0 chr2 6999258 6999381 -246257202 - L2 LINE L2 -20 3252 3121 291 316 52 29 chr2 6999504 6999640 -246256943 - MIR SINE MIR -113 149 11 555 283 46 5 chr2 7000442 7000661 -246255922 - L1MA9 LINE L1 -38 6274 6047 298 372 141 5 chr2 7000723 7000914 -246255669 + MIR SINE MIR 25 241 -21 192 343 15 0 chr2 7001548 7001615 -246254968 - MIR SINE MIR -1 261 194 224 307 107 60 chr2 7002441 7002591 -246253992 - MIR SINE MIR -13 249 93 412 313 79 18 chr2 7003190 7003420 -246253163 + MIR SINE MIR 13 252 -10 299 192 0 0 chr2 7003534 7003586 -246252997 + L2 LINE L2 3261 3312 -1 505 95 0 0 chr2 7005347 7005421 -246251162 + FLAM_A SINE Alu 69 142 0 192 97 0 0 chr2 7006593 7006624 -246249959 + (T)n Simple_repeat Simple_repeat 1 31 0 581 246 102 60 chr2 7008215 7008430 -246248153 + MER58A DNA MER1_type 1 224 0 261 254 17 0 chr2 7010142 7010201 -246246382 - L2 LINE L2 -18 3295 3236 275 210 16 0 chr2 7011271 7011333 -246245250 + Charlie8 DNA MER1_type 102 164 -2253 494 286 17 17 chr2 7011869 7012044 -246244539 + MARNA DNA Mariner 177 351 -235 191 393 0 11 chr2 7012052 7012141 -246244442 - MIR SINE MIR -8 254 167 377 281 12 69 chr2 7012248 7012408 -246244175 - MIR SINE MIR 0 262 112 201 250 0 0 chr2 7013484 7013544 -246243039 + T-rich Low_complexity Low_complexity 1 60 0 429 277 50 0 chr2 7014106 7014225 -246242358 - MLT1B LTR MaLR -2 388 264 2139 133 7 0 chr2 7014681 7014990 -246241593 + AluSx SINE Alu 1 311 -1 222 194 0 104 chr2 7017712 7017779 -246238804 + MER5B DNA MER1_type 109 168 -10 456 19 0 0 chr2 7019544 7019597 -246236986 + (TG)n Simple_repeat Simple_repeat 2 54 0 3499 121 13 26 chr2 7019937 7020468 -246236115 - MER1A DNA MER1_type 0 527 4 385 305 68 28 chr2 7020545 7020722 -246235861 - L2 LINE L2 -9 3304 3121 270 288 62 27 chr2 7020693 7020839 -246235744 - L2 LINE L2 -445 2869 2719 * 315 303 63 0 chr2 7021088 7021230 -246235353 - MER58A DNA MER1_type -31 193 43 528 193 37 9 chr2 7021230 7021339 -246235244 + L1MB8 LINE L1 6060 6171 -7 1443 214 49 45 chr2 7021686 7022135 -246234448 - MLT1C LTR MaLR -16 451 1 359 262 104 0 chr2 7022422 7022654 -246233929 - MLT1G1 LTR MaLR -12 583 236 688 90 0 0 chr2 7023483 7023572 -246233011 + AluSg/x SINE Alu 206 294 -15 237 213 133 0 chr2 7024700 7024775 -246231808 + MER112 DNA MER1_type 145 229 -31 182 306 94 12 chr2 7026124 7026209 -246230374 + MIR3 SINE MIR 110 201 -7 285 252 37 47 chr2 7027266 7027373 -246229210 - MIR3 SINE MIR -6 202 97 214 314 0 29 chr2 7028095 7028165 -246228418 + GA-rich Low_complexity Low_complexity 4 71 0 * 812 213 26 6 chr2 7028145 7028460 -246228123 + (TGGA)n Simple_repeat Simple_repeat 1 321 0 432 171 0 0 chr2 7028476 7028558 -246228025 + (TGGA)n Simple_repeat Simple_repeat 3 84 0 767 154 15 12 chr2 7028580 7028849 -246227734 + (TGGA)n Simple_repeat Simple_repeat 1 270 0 758 148 11 33 chr2 7028867 7029050 -246227533 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 2370 101 0 0 chr2 7032367 7032674 -246223909 - AluSq SINE Alu -6 307 1 242 307 41 96 chr2 7034370 7034640 -246221943 - L2 LINE L2 -61 3211 2957 1632 209 64 9 chr2 7034788 7035224 -246221359 - MLT1C LTR MaLR -4 463 4 28 29 0 0 chr2 7036363 7036398 -246220185 + AT_rich Low_complexity Low_complexity 1 35 0 212 185 0 15 chr2 7036751 7036816 -246219767 + (TG)n Simple_repeat Simple_repeat 1 64 0 2452 92 45 0 chr2 7036821 7037156 -246219427 - THE1A LTR MaLR 0 355 6 204 296 17 43 chr2 7037862 7037977 -246218606 - MIR SINE MIR -76 186 75 180 315 19 0 chr2 7038769 7038823 -246217760 + L2 LINE L2 3218 3272 0 231 233 82 0 chr2 7039169 7039242 -246217341 + L3 LINE CR1 639 717 -860 2321 135 25 0 chr2 7039639 7039994 -246216589 + THE1B LTR MaLR 1 364 0 216 359 38 19 chr2 7040389 7040495 -246216088 - MIR SINE MIR -58 150 43 1655 108 0 0 chr2 7041111 7041323 -246215260 + AluSq SINE Alu 1 212 -101 231 250 76 22 chr2 7041832 7041924 -246214659 - MIR SINE MIR -74 188 92 216 0 0 0 chr2 7042343 7042367 -246214216 + (CA)n Simple_repeat Simple_repeat 2 25 0 405 227 62 0 chr2 7042679 7042776 -246213807 + MER5A DNA MER1_type 7 109 -80 1008 260 149 6 chr2 7042814 7043149 -246213434 - MLT1E LTR MaLR 0 593 211 2514 135 75 96 chr2 7043217 7043808 -246212775 + LTR18B LTR ERVL 1 578 -36 213 121 0 0 chr2 7043832 7043865 -246212718 + (CATATA)n Simple_repeat Simple_repeat 6 38 0 319 237 322 0 chr2 7043872 7043990 -246212593 - MLT1E LTR MaLR -435 158 3 368 237 0 0 chr2 7044070 7044146 -246212437 + MLT1A1 LTR MaLR 1 76 -289 873 173 73 21 chr2 7044173 7044364 -246212219 + MLT1A1 LTR MaLR 165 365 0 196 332 135 43 chr2 7044405 7045145 -246211438 + L2 LINE L2 1812 2619 -695 228 177 0 177 chr2 7045925 7046004 -246210579 + MLT1B LTR MaLR 1 65 -325 188 288 17 0 chr2 7046780 7046839 -246209744 + L2 LINE L2 3248 3307 -6 229 286 56 48 chr2 7046938 7047064 -246209519 + MIR SINE MIR 16 142 -66 974 255 92 28 chr2 7047897 7048427 -246208156 - L1MC5 LINE L1 -47 7914 7351 2376 85 3 0 chr2 7048570 7048863 -246207720 + AluY SINE Alu 1 294 -17 235 300 29 0 chr2 7049646 7049716 -246206867 + CT-rich Low_complexity Low_complexity 6 77 0 722 275 81 95 chr2 7051439 7051955 -246204628 - MLT1H LTR MaLR 0 549 41 210 71 0 0 chr2 7052002 7052030 -246204553 + (A)n Simple_repeat Simple_repeat 1 28 0 264 331 115 22 chr2 7052878 7053340 -246203243 - L2 LINE L2 -925 2389 1885 1651 185 51 48 chr2 7053358 7053753 -246202830 - MSTD LTR MaLR 0 396 1 389 325 0 0 chr2 7054568 7054685 -246201898 - MIR SINE MIR -5 257 141 231 121 0 0 chr2 7054930 7054963 -246201620 + MER31B LTR ERV1 1 33 -433 416 258 10 33 chr2 7054965 7055131 -246201452 + MER31A-int LTR ERV1 3082 3768 -2178 * 8284 177 50 44 chr2 7055110 7055584 -246200999 + MER31A-int LTR ERV1 3102 3572 -1364 2475 81 0 0 chr2 7055584 7055891 -246200692 - AluY SINE Alu -4 307 1 8284 177 50 44 chr2 7055891 7057221 -246199362 + MER31A-int LTR ERV1 3572 4916 -20 2397 159 24 50 chr2 7057221 7057719 -246198864 + MER31A LTR ERV1 1 485 0 311 294 137 0 chr2 7058471 7058617 -246197966 - MIR SINE MIR -78 184 19 217 336 0 28 chr2 7058967 7059110 -246197473 + CT-rich Low_complexity Low_complexity 4 142 0 1230 180 0 14 chr2 7059673 7059890 -246196693 - AluJb SINE Alu -13 299 86 1401 196 42 99 chr2 7059985 7060437 -246196146 + MLT1C LTR MaLR 1 424 -43 2377 96 0 3 chr2 7060437 7060740 -246195843 - AluSx SINE Alu -10 302 1 1401 196 42 99 chr2 7060740 7060782 -246195801 + MLT1C LTR MaLR 424 467 0 227 332 73 32 chr2 7060933 7061153 -246195430 + MIR SINE MIR 21 249 -13 1017 240 40 49 chr2 7061206 7061535 -246195048 + MLT2C1 LTR ERVL 6 331 -66 865 182 6 0 chr2 7061596 7061761 -246194822 + MLT1C-int LTR MaLR 22 187 -1184 * 957 221 103 0 chr2 7061758 7061962 -246194621 + MLT1C-int LTR MaLR 341 565 -806 249 301 170 20 chr2 7062112 7062265 -246194318 + L2 LINE L2 3097 3272 0 283 235 37 12 chr2 7062924 7063005 -246193578 + MER91B DNA MER1_type 57 139 -51 350 256 0 0 chr2 7063164 7063250 -246193333 - MIR SINE MIR -1 261 176 290 311 49 33 chr2 7064130 7064252 -246192331 + L2 LINE L2 3134 3257 -15 442 176 0 20 chr2 7064258 7064360 -246192223 + GA-rich Low_complexity Low_complexity 1 100 0 636 246 154 71 chr2 7064552 7064890 -246191693 - MLT1G3 LTR MaLR -42 488 123 893 216 98 98 chr2 7064894 7065253 -246191330 + MSTC LTR MaLR 1 412 -16 3013 81 0 3 chr2 7065698 7066083 -246190500 - L1PA7 LINE L1 -13 6141 5758 1225 196 56 49 chr2 7066754 7067060 -246189523 - MLT2B3 LTR ERVL 0 554 247 218 323 30 20 chr2 7069309 7069408 -246187175 - MIR SINE MIR -112 150 51 1446 205 32 46 chr2 7069521 7069891 -246186692 + MLT1A1 LTR MaLR 1 365 0 345 309 9 0 chr2 7070639 7070749 -246185834 + L2 LINE L2 3200 3310 -3 223 197 0 42 chr2 7070994 7071065 -246185518 + G-rich Low_complexity Low_complexity 2 69 0 1647 151 64 0 chr2 7072593 7072858 -246183725 + AluSx SINE Alu 1 282 -30 360 326 85 35 chr2 7074606 7074983 -246181600 + L1ME LINE L1 5429 5824 -297 423 229 14 25 chr2 7075373 7075514 -246181069 - MLT1G1 LTR MaLR -400 195 3 356 167 0 0 chr2 7075515 7075575 -246181008 - MER112 DNA MER1_type -193 67 8 297 257 112 26 chr2 7075927 7076079 -246180504 - L1ME LINE L1 -380 5741 5577 240 86 0 0 chr2 7078927 7078962 -246177621 + (CCTG)n Simple_repeat Simple_repeat 2 36 0 2089 257 84 55 chr2 7079287 7080519 -246176064 + L1ME2 LINE L1 3281 4683 -1463 349 83 0 0 chr2 7080519 7080567 -246176016 - MADE1 DNA Mariner 0 80 33 2089 257 84 55 chr2 7080567 7080677 -246175906 + L1ME2 LINE L1 4683 4788 -1358 1119 236 24 39 chr2 7080685 7081016 -246175567 + MER58B DNA MER1_type 1 326 -15 1339 266 65 49 chr2 7081031 7082186 -246174397 + L1ME2 LINE L1 4791 5921 -243 1520 102 56 0 chr2 7082186 7082402 -246174181 + MER30 DNA MER1_type 3 230 0 1339 266 65 49 chr2 7082402 7082511 -246174072 + L1ME2 LINE L1 5921 6027 -137 1018 216 112 75 chr2 7082725 7083100 -246173483 + MLT1B LTR MaLR 2 390 0 893 196 30 0 chr2 7083142 7083310 -246173273 - MER58B DNA MER1_type -1 340 168 2777 241 51 12 chr2 7083672 7084591 -246171992 + L1PA12 LINE L1 2254 3146 -4438 12280 233 17 37 chr2 7084592 7088101 -246168482 - L1P LINE L1 -1082 5064 1627 267 263 25 0 chr2 7088597 7088677 -246167906 + MER103 DNA DNA 7 88 -78 288 170 0 0 chr2 7089333 7089386 -246167197 + (TG)n Simple_repeat Simple_repeat 1 53 0 296 324 29 0 chr2 7090828 7090930 -246165653 - MIR SINE MIR -62 200 96 2017 138 17 3 chr2 7092046 7092344 -246164239 + AluJb SINE Alu 1 302 -10 28 0 0 0 chr2 7092395 7092423 -246164160 + AT_rich Low_complexity Low_complexity 1 28 0 628 151 95 0 chr2 7092651 7092777 -246163806 - L1MA9 LINE L1 0 6312 6175 208 148 0 37 chr2 7092783 7092837 -246163746 + (TTCC)n Simple_repeat Simple_repeat 3 54 0 225 213 0 0 chr2 7092846 7092893 -246163690 - L1MA9 LINE L1 -147 6165 6119 369 149 0 0 chr2 7093563 7093630 -246162953 + (TG)n Simple_repeat Simple_repeat 1 67 0 4570 132 7 11 chr2 7093847 7094561 -246162022 + MER50 LTR ERV1 1 711 -23 260 318 59 34 chr2 7094695 7094934 -246161649 - L2 LINE L2 -852 2462 2218 2209 119 0 0 chr2 7095323 7095618 -246160965 - AluSx SINE Alu -17 295 1 3817 148 39 10 chr2 7096087 7096789 -246159794 - MER50 LTR ERV1 -12 722 1 218 294 56 40 chr2 7096798 7096924 -246159659 - L2 LINE L2 -512 2802 2675 841 144 20 0 chr2 7098221 7098367 -246158216 - L1MA5A LINE L1 0 6297 6149 239 293 0 37 chr2 7098710 7098792 -246157791 + MIR SINE MIR 38 116 -92 2072 118 43 38 chr2 7099292 7099665 -246156918 + THE1C LTR MaLR 1 375 0 433 315 55 22 chr2 7100267 7100632 -246155951 - L1M4 LINE L1 -2164 3982 3606 188 65 0 32 chr2 7100640 7100671 -246155912 + (TCC)n Simple_repeat Simple_repeat 3 32 0 335 280 73 7 chr2 7101002 7101152 -246155431 - L1M4 LINE L1 -2922 3224 3065 2194 131 0 0 chr2 7101780 7102086 -246154497 - AluSq SINE Alu -7 306 1 238 247 0 71 chr2 7102392 7102477 -246154106 + T-rich Low_complexity Low_complexity 2 80 0 315 113 0 0 chr2 7102893 7102946 -246153637 + (TG)n Simple_repeat Simple_repeat 2 54 0 2019 121 79 25 chr2 7104387 7104743 -246151840 + THE1C LTR MaLR 1 375 0 1844 153 0 0 chr2 7105125 7105419 -246151164 + AluSx SINE Alu 22 315 0 304 316 66 20 chr2 7106982 7107134 -246149449 + MER5B DNA MER1_type 1 159 -19 302 250 20 60 chr2 7108518 7108618 -246147965 + MIR SINE MIR 50 145 -63 252 122 0 0 chr2 7109276 7109317 -246147266 + (TG)n Simple_repeat Simple_repeat 2 42 0 2295 84 0 37 chr2 7110424 7110746 -246145837 - AluSg SINE Alu 0 310 1 830 144 106 48 chr2 7110841 7110916 -246145667 + THE1C LTR MaLR 1 70 -305 2523 112 14 16 chr2 7110916 7111281 -246145302 + THE1B LTR MaLR 1 364 0 830 144 106 48 chr2 7111281 7111413 -246145170 + THE1C LTR MaLR 70 220 -155 366 23 0 0 chr2 7111887 7111930 -246144653 + (CA)n Simple_repeat Simple_repeat 1 43 0 1226 186 13 13 chr2 7111946 7112182 -246144401 + MER46A DNA MER2_type 1 236 0 475 239 117 35 chr2 7112292 7112522 -246144061 - HAL1 LINE L1 -10 2497 2249 707 318 64 41 chr2 7112609 7113317 -246143266 - HAL1 LINE L1 -533 1974 1251 344 233 0 33 chr2 7113338 7113428 -246143155 - HAL1 LINE L1 -1355 1152 1066 1306 247 98 43 chr2 7113488 7113958 -246142625 - MLT1D LTR MaLR -9 496 1 421 309 34 7 chr2 7113982 7114131 -246142452 - HAL1 LINE L1 -1189 1318 1166 1138 239 97 50 chr2 7114254 7114793 -246141790 - HAL1 LINE L1 -1313 1194 631 330 281 87 20 chr2 7116094 7116290 -246140293 - MIR SINE MIR -13 249 41 21 0 0 0 chr2 7116545 7116566 -246140017 + AT_rich Low_complexity Low_complexity 1 21 0 35 0 0 0 chr2 7117534 7117569 -246139014 + AT_rich Low_complexity Low_complexity 1 35 0 210 106 47 35 chr2 7117576 7117661 -246138922 + (TATAA)n Simple_repeat Simple_repeat 5 90 0 23 0 0 0 chr2 7117664 7117687 -246138896 + AT_rich Low_complexity Low_complexity 1 23 0 197 346 79 0 chr2 7119275 7119376 -246137207 - MIR SINE MIR -84 124 16 643 64 0 32 chr2 7119935 7120029 -246136554 - L1PA8 LINE L1 0 6172 6082 318 128 0 0 chr2 7120029 7120076 -246136507 - L1PA8 LINE L1 -44 6128 6082 349 85 0 0 chr2 7120076 7120123 -246136460 - L1PA8A LINE L1 -42 6089 6043 * 383 56 0 153 chr2 7120098 7120170 -246136413 - L1PA8 LINE L1 -30 6142 6082 356 64 0 0 chr2 7120170 7120217 -246136366 - L1PA8 LINE L1 -44 6128 6082 354 104 0 0 chr2 7120217 7120265 -246136318 - L1PA8 LINE L1 -44 6128 6081 379 43 0 0 chr2 7120265 7120311 -246136272 - L1PA8 LINE L1 -45 6127 6082 * 383 56 0 153 chr2 7120286 7120358 -246136225 - L1PA8 LINE L1 -30 6142 6082 330 110 0 151 chr2 7120333 7120406 -246136177 - L1PA8 LINE L1 -30 6142 6081 * 379 43 0 0 chr2 7120406 7120452 -246136131 - L1PA8 LINE L1 -45 6127 6082 370 69 0 153 chr2 7120427 7120499 -246136084 - L1PA8A LINE L1 -28 6103 6043 * 755 74 0 90 chr2 7120474 7120596 -246135987 - L1PA8 LINE L1 -30 6142 6032 334 325 12 31 chr2 7120841 7121004 -246135579 + MIR SINE MIR 77 236 -26 238 311 48 10 chr2 7121323 7121426 -246135157 - MIR SINE MIR -150 112 6 856 303 129 21 chr2 7121531 7122112 -246134471 + L2 LINE L2 2112 2755 -559 190 313 78 100 chr2 7122597 7123108 -246133475 + L2 LINE L2 2809 3308 -5 264 217 158 33 chr2 7124244 7124364 -246132219 + L2 LINE L2 2235 2369 -945 359 309 144 45 chr2 7125049 7125250 -246131333 + L1MEd LINE L1 411 631 -5488 369 273 0 10 chr2 7125546 7125645 -246130938 - MER5A DNA MER1_type -83 106 9 555 247 20 13 chr2 7125679 7125829 -246130754 - MLT1E2 LTR MaLR -3 623 473 2593 138 4 5 chr2 7125923 7126372 -246130211 - L1P LINE L1 -1544 4602 4158 1824 253 109 20 chr2 7126381 7127094 -246129489 - L1ME1 LINE L1 -17 6149 5373 289 200 43 87 chr2 7127103 7127126 -246129457 - L1ME1 LINE L1 -846 5300 5278 2181 80 0 3 chr2 7127126 7127412 -246129171 + L1PA5 LINE L1 5870 6154 0 289 200 43 87 chr2 7127412 7127503 -246129080 - L1ME1 LINE L1 -868 5278 5191 * 7412 148 55 27 chr2 7127497 7127977 -246128606 + L1MCa LINE L1 69 534 -5892 1573 175 44 34 chr2 7127977 7128274 -246128309 - AluJo SINE Alu -12 300 1 7412 148 55 27 chr2 7128274 7129204 -246127379 + L1MCa LINE L1 534 1510 -4916 2494 146 41 7 chr2 7129204 7129615 -246126968 + MSTA LTR MaLR 1 425 -3 7412 148 55 27 chr2 7129615 7129755 -246126828 + L1MCa LINE L1 1510 1645 -4781 1213 268 51 28 chr2 7129760 7130253 -246126330 - L1ME1 LINE L1 -2362 3784 3281 400 167 14 0 chr2 7130260 7130332 -246126251 - 7SK RNA RNA 0 193 121 604 152 0 9 chr2 7130368 7130480 -246126103 - 7SK RNA RNA -68 125 15 6213 64 7 7 chr2 7130481 7131600 -246124983 + L1PA7 LINE L1 4918 6039 -115 1006 263 92 46 chr2 7131759 7132245 -246124338 - MLT1E LTR MaLR 0 593 103 569 194 0 0 chr2 7132231 7132324 -246124259 - MLT1E LTR MaLR -449 144 52 * 239 139 0 0 chr2 7132734 7132770 -246123813 + L1P LINE L1 5224 5259 -887 246 357 7 50 chr2 7134231 7134371 -246122212 - MIR SINE MIR -51 211 78 258 282 24 73 chr2 7134522 7134646 -246121937 - L2 LINE L2 -218 3054 2937 194 286 62 71 chr2 7135023 7135135 -246121448 - L2 LINE L2 -11 3302 3192 2446 74 0 0 chr2 7135865 7136161 -246120422 + AluSg SINE Alu 1 296 -14 2015 141 0 0 chr2 7136476 7136774 -246119809 - AluSx SINE Alu -14 298 1 2180 126 7 0 chr2 7137151 7137453 -246119130 - AluSq SINE Alu -9 304 1 1206 95 0 0 chr2 7137466 7137624 -246118959 - AluY SINE Alu -8 303 146 321 293 34 27 chr2 7138263 7138410 -246118173 - MLT1I LTR MaLR -2 407 260 911 188 73 5 chr2 7139973 7140165 -246116418 + MLT2C1 LTR ERVL 1 205 -192 798 226 68 30 chr2 7140146 7140380 -246116203 + MLT1C LTR MaLR 225 467 0 * 6047 264 77 23 chr2 7140934 7143432 -246113151 + L1MEc LINE L1 46 2644 -3571 2363 189 38 2 chr2 7144539 7144956 -246111627 - MSTB1 LTR MaLR 0 432 1 2530 149 28 28 chr2 7145519 7145947 -246110636 + MSTA LTR MaLR 1 428 0 22 0 0 0 chr2 7147450 7147472 -246109111 + AT_rich Low_complexity Low_complexity 1 22 0 1265 221 164 45 chr2 7147487 7148010 -246108573 - L1MC2 LINE L1 0 7970 6186 281 218 30 69 chr2 7148010 7148111 -246108472 - MLT1I LTR MaLR -436 131 35 724 143 45 112 chr2 7148129 7148352 -246108231 - L1MC3 LINE L1 -706 7079 6872 204 40 0 0 chr2 7148362 7148387 -246108196 + (TATATG)n Simple_repeat Simple_repeat 4 28 0 246 32 0 0 chr2 7148393 7148424 -246108159 + (CA)n Simple_repeat Simple_repeat 2 32 0 1365 217 75 63 chr2 7148424 7148924 -246107659 - L1MC3 LINE L1 -1230 6555 6050 5677 176 118 101 chr2 7148961 7149551 -246107032 - L1MCa LINE L1 -4184 2242 1663 186 43 0 0 chr2 7149551 7149574 -246107009 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 5677 176 118 101 chr2 7149574 7150937 -246105646 - L1MCa LINE L1 -4763 1663 256 314 292 34 0 chr2 7151034 7151123 -246105460 - L1MC4 LINE L1 -1339 6703 6612 418 168 15 23 chr2 7151124 7151255 -246105328 + (TA)n Simple_repeat Simple_repeat 1 130 0 1649 182 3 20 chr2 7151260 7151556 -246105027 - AluJb SINE Alu -21 291 1 252 395 8 8 chr2 7152575 7152709 -246103874 - MIR3 SINE MIR -38 170 37 385 314 108 10 chr2 7153566 7153760 -246102823 - MIR SINE MIR 0 262 50 300 198 42 18 chr2 7154152 7154319 -246102264 + (TAGA)n Simple_repeat Simple_repeat 3 173 0 466 140 20 0 chr2 7154481 7154581 -246102002 + (TAGA)n Simple_repeat Simple_repeat 3 104 0 1890 153 10 0 chr2 7155321 7155629 -246100954 - AluSx SINE Alu -1 311 1 195 114 0 0 chr2 7156074 7156109 -246100474 + (CTTA)n Simple_repeat Simple_repeat 2 36 0 229 250 0 0 chr2 7156459 7156507 -246100076 - MIR SINE MIR -129 79 32 23 0 0 0 chr2 7156940 7156963 -246099620 + AT_rich Low_complexity Low_complexity 1 23 0 494 16 16 0 chr2 7159566 7159629 -246096954 + (TC)n Simple_repeat Simple_repeat 2 65 0 558 303 90 10 chr2 7159979 7160279 -246096304 + L2 LINE L2 1984 2307 -1007 198 244 22 0 chr2 7160566 7160611 -246095972 + MIR3 SINE MIR 135 180 -28 1107 233 51 10 chr2 7160740 7161036 -246095547 + MLT1C LTR MaLR 152 459 -8 290 321 18 28 chr2 7161045 7161154 -246095429 + L2 LINE L2 2344 2451 -863 506 340 36 57 chr2 7161258 7161593 -246094990 + L2 LINE L2 2986 3313 0 1371 101 48 18 chr2 7162240 7162467 -246094116 - L1MA8 LINE L1 -6 6285 6052 239 342 82 6 chr2 7162705 7162863 -246093720 - MIR SINE MIR -55 207 38 1720 185 44 15 chr2 7163386 7163670 -246092913 + MLT2B2 LTR ERVL 1 275 -279 207 0 0 0 chr2 7163670 7163693 -246092890 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1720 185 44 15 chr2 7163693 7163833 -246092750 + MLT2B2 LTR ERVL 275 410 -144 986 54 42 0 chr2 7163833 7164000 -246092583 + (TCTA)n Simple_repeat Simple_repeat 4 177 0 1720 185 44 15 chr2 7164000 7164018 -246092565 + MLT2B2 LTR ERVL 410 552 -2 1119 40 0 0 chr2 7164886 7165011 -246091572 + AluY SINE Alu 1 125 -186 9985 26 2 1 chr2 7165011 7166948 -246089635 + L1PA3 LINE L1 4230 6169 0 2143 123 0 19 chr2 7166963 7167272 -246089311 + AluSx SINE Alu 3 305 -7 319 186 0 17 chr2 7167282 7167341 -246089242 - LTR67 LTR ERVL -86 471 414 435 153 153 0 chr2 7167391 7167476 -246089107 - MER53 DNA DNA -91 98 1 252 246 15 0 chr2 7167689 7167754 -246088829 + L1ME LINE L1 5367 5432 -732 386 221 271 0 chr2 7167781 7167903 -246088680 + MIR SINE MIR 12 166 -96 2196 102 3 0 chr2 7167953 7168257 -246088326 - AluSp SINE Alu -3 310 6 377 260 21 10 chr2 7168332 7168428 -246088155 + L2 LINE L2 39 135 -3179 2730 167 28 28 chr2 7168455 7168999 -246087584 + L1MC3 LINE L1 7241 7784 -1 23 0 0 0 chr2 7168999 7169022 -246087561 + AT_rich Low_complexity Low_complexity 1 23 0 1595 62 0 0 chr2 7169022 7169214 -246087369 + AluY SINE Alu 118 309 -2 315 0 0 0 chr2 7169220 7169255 -246087328 + (TAA)n Simple_repeat Simple_repeat 2 36 0 349 267 139 0 chr2 7170146 7170247 -246086336 + MER5B DNA MER1_type 4 118 -60 948 182 61 22 chr2 7170708 7170939 -246085644 - LTR32 LTR ERVL 0 471 232 279 203 78 0 chr2 7170921 7170985 -246085598 - LTR32 LTR ERVL -400 71 3 * 334 257 83 0 chr2 7170991 7171100 -246085483 - L2 LINE L2 -79 3234 3117 794 192 46 0 chr2 7171548 7171699 -246084884 + MER97c DNA MER1_type? 19 176 -914 1345 101 0 0 chr2 7172453 7172621 -246083962 + AluSc SINE Alu 134 301 -8 912 336 126 19 chr2 7172759 7173444 -246083139 - ERVL LTR ERVL -284 5480 4723 206 328 48 40 chr2 7174013 7174138 -246082445 - MIR SINE MIR -59 203 78 279 243 57 0 chr2 7174262 7174332 -246082251 + MER91B DNA MER1_type 6 79 -111 301 179 18 0 chr2 7175408 7175464 -246081119 + MER91B DNA MER1_type 6 62 -128 204 313 51 21 chr2 7176158 7176294 -246080289 + MIR SINE MIR 3 135 -73 21 0 0 0 chr2 7176313 7176334 -246080249 + AT_rich Low_complexity Low_complexity 1 21 0 2258 104 44 41 chr2 7176777 7177143 -246079440 + THE1C LTR MaLR 5 371 -4 581 277 116 31 chr2 7177363 7177655 -246078928 + LTR33 LTR ERVL 205 521 0 1066 81 0 0 chr2 7177748 7177884 -246078699 + AluY SINE Alu 173 308 -3 351 239 0 0 chr2 7178101 7178231 -246078352 + (TG)n Simple_repeat Simple_repeat 2 131 0 579 239 3 0 chr2 7178253 7178610 -246077973 + (TG)n Simple_repeat Simple_repeat 1 358 0 252 305 162 0 chr2 7179260 7179414 -246077169 - MIR3 SINE MIR -9 199 21 1188 196 46 39 chr2 7181471 7181751 -246074832 + AluJo SINE Alu 1 282 -30 3242 190 137 112 chr2 7181821 7182340 -246074243 + L1MC3 LINE L1 6566 7070 -715 263 294 20 10 chr2 7182340 7182442 -246074141 + MLT1F1 LTR MaLR 29 131 -436 3242 190 137 112 chr2 7182442 7183000 -246073583 + L1MC3 LINE L1 7070 7774 -11 267 365 19 0 chr2 7183005 7183112 -246073471 - L2 LINE L2 -15 3298 3190 417 330 57 24 chr2 7183616 7183828 -246072755 + MIR SINE MIR 14 232 -30 477 0 0 0 chr2 7184039 7184092 -246072491 + (GGAA)n Simple_repeat Simple_repeat 4 56 0 185 0 40 0 chr2 7184091 7184116 -246072467 + (TAA)n Simple_repeat Simple_repeat 2 27 0 * 1301 268 49 12 chr2 7184438 7184848 -246071735 + LTR16C LTR ERVL 67 491 0 3366 187 101 41 chr2 7185067 7185916 -246070667 - L1MA4 LINE L1 -1 6299 5400 1084 103 5 19 chr2 7187194 7187684 -246068899 + (TCCA)n Simple_repeat Simple_repeat 1 666 0 289 316 129 84 chr2 7188637 7188862 -246067721 - L2 LINE L2 -8 3264 3030 261 353 181 23 chr2 7189010 7189143 -246067440 - L2 LINE L2 -8 3264 3111 388 398 25 0 chr2 7189615 7189776 -246066807 - L2 LINE L2 -1 3271 3107 637 91 20 0 chr2 7191332 7191431 -246065152 - L1MA10 LINE L1 0 6334 6234 1695 161 0 28 chr2 7193639 7193953 -246062630 - AluJb SINE Alu 0 307 2 186 292 31 0 chr2 7194414 7194479 -246062104 - MIR SINE MIR -70 192 126 1721 184 5 89 chr2 7196894 7197083 -246059500 + MER57A LTR ERV1 1 134 -269 2071 143 23 52 chr2 7197083 7197468 -246059115 + THE1C LTR MaLR 1 374 -1 1721 184 5 89 chr2 7197468 7197718 -246058865 + MER57A LTR ERV1 134 403 0 242 240 125 87 chr2 7198564 7198886 -246057697 + L1ME4a LINE L1 5584 5927 -194 207 0 0 0 chr2 7198886 7198909 -246057674 + (TG)n Simple_repeat Simple_repeat 2 24 0 242 240 125 87 chr2 7198909 7199002 -246057581 + L1ME4a LINE L1 5927 6015 -106 22 35 0 0 chr2 7199059 7199088 -246057495 + AT_rich Low_complexity Low_complexity 1 29 0 393 276 91 73 chr2 7199170 7199458 -246057125 - L1MEd LINE L1 -4867 1252 971 1596 180 16 32 chr2 7199458 7199774 -246056809 - AluJo SINE Alu -1 311 1 393 276 91 73 chr2 7199774 7200047 -246056536 - L1MEd LINE L1 -5148 971 681 1807 236 31 8 chr2 7200695 7201080 -246055503 + MSTD LTR MaLR 1 394 -2 453 293 47 22 chr2 7201122 7201354 -246055229 + L1MC/D LINE L1 5584 5821 -1987 767 301 0 0 chr2 7201355 7201558 -246055025 + MER63A DNA MER1_type 1 203 -7 1625 147 0 96 chr2 7201688 7202002 -246054581 + AluJo SINE Alu 3 286 -26 24 32 0 0 chr2 7202270 7202301 -246054282 + AT_rich Low_complexity Low_complexity 1 31 0 21 36 0 0 chr2 7202576 7202604 -246053979 + AT_rich Low_complexity Low_complexity 1 28 0 1613 202 71 49 chr2 7202610 7202976 -246053607 + MLT1A2 LTR MaLR 1 374 0 628 49 24 0 chr2 7205030 7205112 -246051471 - L1PA10 LINE L1 -8 6160 6077 242 35 0 0 chr2 7205113 7205142 -246051441 + L1PA10 LINE L1 6020 6048 -120 5657 273 47 66 chr2 7205450 7206533 -246050050 - L2 LINE L2 -405 2909 1806 315 0 0 0 chr2 7206533 7206568 -246050015 + (TTA)n Simple_repeat Simple_repeat 2 36 0 1509 173 24 12 chr2 7206571 7206820 -246049763 - AluJb SINE Alu -30 282 31 564 195 0 0 chr2 7206820 7206902 -246049681 - AluJ/FLAM SINE Alu -228 84 3 5657 273 47 66 chr2 7206902 7206977 -246049606 - L2 LINE L2 -1509 1805 1730 1952 126 31 0 chr2 7206977 7207263 -246049320 + AluSx SINE Alu 17 311 -1 5657 273 47 66 chr2 7207263 7208361 -246048222 - L2 LINE L2 -1584 1730 612 223 385 62 26 chr2 7208524 7208716 -246047867 + L2 LINE L2 2652 2850 -464 326 303 92 17 chr2 7209473 7209592 -246046991 - MIR SINE MIR -60 148 21 180 0 0 0 chr2 7210577 7210597 -246045986 + (A)n Simple_repeat Simple_repeat 1 20 0 902 107 61 0 chr2 7211208 7211339 -246045244 + MER85 DNA T2_type 1 139 0 272 311 145 25 chr2 7212512 7212893 -246043690 + MLT1J LTR MaLR 35 509 -2 2133 171 97 13 chr2 7213285 7213678 -246042905 + MSTB LTR MaLR 1 426 0 1818 144 3 56 chr2 7213844 7214164 -246042419 + AluJb SINE Alu 1 303 -9 249 108 0 0 chr2 7214164 7214201 -246042382 + (TG)n Simple_repeat Simple_repeat 1 37 0 194 385 15 22 chr2 7214337 7214472 -246042111 - L2 LINE L2 -534 2780 2647 181 216 54 0 chr2 7215600 7215637 -246040946 + L2 LINE L2 3182 3220 -93 1820 214 23 3 chr2 7216674 7217025 -246039558 - MLT1A1 LTR MaLR -1 364 7 1634 174 59 3 chr2 7217778 7218066 -246038517 - AluJb SINE Alu -8 304 1 222 190 17 17 chr2 7218107 7218165 -246038418 + A-rich Low_complexity Low_complexity 5 62 0 533 277 34 0 chr2 7218176 7218324 -246038259 - MIR SINE MIR -108 154 2 240 143 0 0 chr2 7219059 7219101 -246037482 + (TA)n Simple_repeat Simple_repeat 1 42 0 56 16 0 0 chr2 7219148 7219211 -246037372 + AT_rich Low_complexity Low_complexity 1 63 0 1436 182 0 0 chr2 7219312 7219559 -246037024 - MER57A LTR ERV1 0 403 157 1872 149 10 7 chr2 7221955 7222243 -246034340 - AluSx SINE Alu -23 289 1 187 241 74 19 chr2 7222367 7222421 -246034162 + L2 LINE L2 3195 3251 -21 191 330 80 18 chr2 7222444 7222556 -246034027 - L2 LINE L2 -6 3307 3189 2153 135 0 0 chr2 7222841 7223138 -246033445 - AluSx SINE Alu -15 297 1 360 316 0 0 chr2 7223173 7223268 -246033315 + L2 LINE L2 3174 3268 -4 1975 193 51 22 chr2 7223332 7223746 -246032837 + MSTB LTR MaLR 1 426 0 308 159 0 16 chr2 7224536 7224599 -246031984 + (TG)n Simple_repeat Simple_repeat 2 63 0 268 278 144 0 chr2 7226541 7226638 -246029945 - MIR SINE MIR -75 187 77 1651 154 7 54 chr2 7226812 7227110 -246029473 + AluJo SINE Alu 5 288 -24 237 65 0 0 chr2 7227271 7227302 -246029281 + (TG)n Simple_repeat Simple_repeat 2 32 0 189 0 0 0 chr2 7227323 7227344 -246029239 + (CA)n Simple_repeat Simple_repeat 2 22 0 * 576 29 0 0 chr2 7227343 7227413 -246029170 + (TCTA)n Simple_repeat Simple_repeat 4 73 0 192 40 0 0 chr2 7227436 7227461 -246029122 + (GA)n Simple_repeat Simple_repeat 2 26 0 22 35 0 0 chr2 7227505 7227534 -246029049 + AT_rich Low_complexity Low_complexity 1 29 0 234 282 26 13 chr2 7228207 7228285 -246028298 + MIR3 SINE MIR 100 178 -30 22 0 0 0 chr2 7228571 7228593 -246027990 + AT_rich Low_complexity Low_complexity 1 22 0 2281 96 0 7 chr2 7229535 7229836 -246026747 + AluY SINE Alu 1 299 -12 21 0 0 0 chr2 7231984 7232005 -246024578 + AT_rich Low_complexity Low_complexity 1 21 0 2270 118 0 0 chr2 7232162 7232466 -246024117 + AluSx SINE Alu 2 305 -7 207 125 0 0 chr2 7233228 7233268 -246023315 + (T)n Simple_repeat Simple_repeat 1 40 0 22 43 0 21 chr2 7233277 7233307 -246023276 + AT_rich Low_complexity Low_complexity 1 31 -15 2945 102 67 9 chr2 7233307 7233756 -246022827 - L1PB1 LINE L1 -3 6148 5674 22 43 0 21 chr2 7233756 7233772 -246022811 + AT_rich Low_complexity Low_complexity 31 46 0 2754 30 0 0 chr2 7233772 7234075 -246022508 - L1PA5 LINE L1 -11 6143 5841 235 293 57 19 chr2 7234619 7234725 -246021858 - L1MDa LINE L1 -4643 1897 1788 30 0 0 0 chr2 7234930 7234960 -246021623 + AT_rich Low_complexity Low_complexity 1 30 0 2901 194 55 5 chr2 7235768 7236346 -246020237 + MER82 DNA MER2_type 47 653 0 245 336 50 29 chr2 7236370 7236510 -246020073 + MIR3 SINE MIR 16 158 -50 7274 160 11 27 chr2 7236614 7237296 -246019287 - HSMAR2 DNA Mariner -2 1300 648 2113 128 3 0 chr2 7237296 7237594 -246018989 + AluSc SINE Alu 10 308 -1 7274 160 11 27 chr2 7237594 7238223 -246018360 - HSMAR2 DNA Mariner -654 648 10 312 227 40 13 chr2 7238713 7238788 -246017795 + MER5A DNA MER1_type 30 106 -83 402 312 26 21 chr2 7239405 7239594 -246016989 - MIR SINE MIR 0 262 73 442 286 23 15 chr2 7240648 7240781 -246015802 + MIR3 SINE MIR 75 208 0 317 304 62 0 chr2 7242146 7242258 -246014325 + MER34 LTR ERV1 1 119 -423 * 1477 265 78 13 chr2 7242247 7242711 -246013872 + LTR48B LTR ERV1 151 644 0 2289 175 144 45 chr2 7243114 7243692 -246012891 + LTR24C LTR ERV1 1 635 0 204 213 43 0 chr2 7244525 7244572 -246012011 + (CATATA)n Simple_repeat Simple_repeat 4 52 0 241 251 5 0 chr2 7245148 7245228 -246011355 + MIR SINE MIR 97 178 -30 1678 190 14 3 chr2 7245576 7245866 -246010717 - AluJo SINE Alu -18 294 2 218 312 80 14 chr2 7246274 7246412 -246010171 + MIR SINE MIR 70 216 -46 215 288 68 0 chr2 7246516 7246589 -246009994 - MIR SINE MIR -95 167 90 13096 134 28 122 chr2 7246887 7249649 -246006934 + L1PA15-16 LINE L1 2 2502 -4347 1061 150 6 12 chr2 7249695 7249868 -246006715 + L1PA16 LINE L1 5993 6164 -2 1695 229 128 18 chr2 7250254 7250482 -246006101 - MLT1D LTR MaLR -1 504 303 2279 104 13 0 chr2 7250482 7250781 -246005802 - AluSx SINE Alu -9 303 1 1695 229 128 18 chr2 7250781 7251006 -246005577 - MLT1D LTR MaLR -202 303 1 205 153 17 34 chr2 7251711 7251770 -246004813 + CT-rich Low_complexity Low_complexity 2 59 0 202 352 44 0 chr2 7251837 7251928 -246004655 - L2 LINE L2 -1001 2313 2219 237 139 0 0 chr2 7251977 7252020 -246004563 + (CA)n Simple_repeat Simple_repeat 2 44 0 22 0 0 0 chr2 7252907 7252929 -246003654 + AT_rich Low_complexity Low_complexity 1 22 0 210 362 38 0 chr2 7254191 7254296 -246002287 + MIR SINE MIR 33 141 -67 827 269 0 0 chr2 7254778 7254971 -246001612 - MER58A DNA MER1_type -5 219 27 196 241 68 33 chr2 7256869 7256960 -245999623 + MIR SINE MIR 28 126 -82 1623 99 86 65 chr2 7256960 7257252 -245999331 - AluSq SINE Alu -6 307 10 196 241 68 33 chr2 7257252 7257270 -245999313 + MIR SINE MIR 126 142 -66 266 361 38 19 chr2 7257668 7257826 -245998757 + MIR SINE MIR 54 214 -48 267 250 0 0 chr2 7258344 7258444 -245998139 + (TG)n Simple_repeat Simple_repeat 1 100 0 439 238 129 41 chr2 7259206 7259423 -245997160 - MIR SINE MIR -11 251 22 214 266 78 104 chr2 7260054 7260208 -245996375 - MER5B DNA MER1_type -35 154 5 1838 178 0 3 chr2 7260314 7260607 -245995976 + AluJb SINE Alu 3 294 -18 369 215 65 9 chr2 7260784 7260903 -245995680 - MLT1I LTR MaLR 0 450 281 236 328 25 17 chr2 7260990 7261109 -245995474 - MLT1I LTR MaLR -289 260 141 627 157 6 93 chr2 7261578 7261705 -245994878 + L1MC2 LINE L1 6188 6298 -46 2325 115 0 0 chr2 7261705 7262009 -245994574 - AluSx SINE Alu -8 304 1 627 157 6 93 chr2 7262009 7262053 -245994530 + L1MC2 LINE L1 6298 6344 0 * 1893 248 148 58 chr2 7262049 7262955 -245993628 + L1MC4 LINE L1 6914 7918 -124 333 0 0 0 chr2 7262955 7262992 -245993591 + (CA)n Simple_repeat Simple_repeat 2 38 0 1893 248 148 58 chr2 7262992 7263075 -245993508 + L1MC4 LINE L1 7918 7992 -50 2108 130 0 0 chr2 7264110 7264410 -245992173 - AluSc SINE Alu -9 300 1 1882 233 137 37 chr2 7265793 7266445 -245990138 - L1ME1 LINE L1 -18 6148 5432 1736 188 3 10 chr2 7266640 7266944 -245989639 + AluJo SINE Alu 1 302 -10 2144 190 128 0 chr2 7267171 7267593 -245988990 + MLT2B2 LTR ERVL 1 476 -39 576 36 58 29 chr2 7267593 7267730 -245988853 + (TCTA)n Simple_repeat Simple_repeat 2 142 0 356 100 50 20 chr2 7267742 7267842 -245988741 + (TCTA)n Simple_repeat Simple_repeat 3 105 0 22 0 0 0 chr2 7267928 7267950 -245988633 + AT_rich Low_complexity Low_complexity 1 22 0 2286 123 0 0 chr2 7268382 7268690 -245987893 - AluSg SINE Alu -2 308 1 24 32 0 0 chr2 7269251 7269282 -245987301 + AT_rich Low_complexity Low_complexity 1 31 0 287 113 19 0 chr2 7269605 7269658 -245986925 + CT-rich Low_complexity Low_complexity 1 54 0 390 57 0 0 chr2 7269924 7269977 -245986606 + (TG)n Simple_repeat Simple_repeat 2 54 0 613 287 22 67 chr2 7270866 7271134 -245985449 + MLT1I LTR MaLR 95 350 -59 851 239 29 19 chr2 7271423 7271632 -245984951 + MER58A DNA MER1_type 7 217 -7 248 344 11 11 chr2 7272985 7273075 -245983508 - L2 LINE L2 -78 3194 3105 2212 111 0 3 chr2 7274164 7274461 -245982122 + AluSg SINE Alu 11 306 -4 271 196 71 131 chr2 7274509 7274623 -245981960 - MIR3 SINE MIR -21 187 85 667 247 17 11 chr2 7274623 7274797 -245981786 - MER5B DNA MER1_type -3 175 1 271 196 71 131 chr2 7274797 7274850 -245981733 - MIR3 SINE MIR -123 85 30 1314 170 50 57 chr2 7275720 7275866 -245980717 + AluJo SINE Alu 1 146 -166 2473 57 3 3 chr2 7275866 7276164 -245980419 + AluY SINE Alu 1 298 -13 1314 170 50 57 chr2 7276164 7276300 -245980283 + AluJo SINE Alu 146 281 -31 1729 138 0 8 chr2 7276699 7276986 -245979597 + AluSg SINE Alu 29 313 0 1614 169 59 72 chr2 7277192 7277582 -245979001 - MLT1B LTR MaLR 0 390 6 2138 118 3 0 chr2 7278006 7278295 -245978288 + AluSx SINE Alu 5 294 -18 2117 111 0 3 chr2 7279129 7279427 -245977156 + AluSg SINE Alu 1 297 -13 397 193 67 8 chr2 7279465 7279584 -245976999 + L1MCa LINE L1 1293 1418 -5008 204 143 0 24 chr2 7279584 7279626 -245976957 + (CAAA)n Simple_repeat Simple_repeat 1 41 0 26 64 0 0 chr2 7279776 7279823 -245976760 + AT_rich Low_complexity Low_complexity 1 47 0 24 53 0 0 chr2 7279848 7279886 -245976697 + AT_rich Low_complexity Low_complexity 1 38 0 581 194 8 23 chr2 7280114 7280243 -245976340 + MIR SINE MIR 105 231 -31 27 29 0 0 chr2 7282015 7282049 -245974534 + AT_rich Low_complexity Low_complexity 1 34 0 437 337 76 52 chr2 7283468 7283756 -245972827 - L2 LINE L2 0 3272 2978 323 273 27 9 chr2 7283829 7283939 -245972644 - MIR SINE MIR 0 262 151 349 359 132 23 chr2 7283940 7284160 -245972423 + L3 LINE CR1 1328 1571 -6 2121 153 42 30 chr2 7284631 7285179 -245971404 - MLT2A2 LTR ERVL 0 554 1 14805 90 13 3 chr2 7285179 7287266 -245969317 - HERVL-A2 LTR ERVL 0 5654 3548 333 199 35 106 chr2 7288021 7288162 -245968421 + MER104 DNA Tc2 1 131 -49 192 356 75 26 chr2 7289013 7289280 -245967303 + L2 LINE L2 921 1200 -2114 307 368 73 51 chr2 7289836 7290206 -245966377 + L2 LINE L2 2895 3272 0 1649 247 63 33 chr2 7291118 7292272 -245964311 + L1ME1 LINE L1 4522 5716 -448 318 217 132 42 chr2 7292287 7292485 -245964098 + L1ME1 LINE L1 5965 6334 0 231 340 64 14 chr2 7292604 7292745 -245963838 + L2 LINE L2 3162 3309 -4 3791 189 22 28 chr2 7294040 7295375 -245961208 - L1MB3 LINE L1 -41 6142 4819 2021 212 40 16 chr2 7295578 7296022 -245960561 + MLT2B2 LTR ERVL 1 455 -60 951 57 19 19 chr2 7296022 7296181 -245960402 + (TCTA)n Simple_repeat Simple_repeat 2 160 0 341 335 40 50 chr2 7297095 7297295 -245959288 + MIR SINE MIR 47 244 -18 192 158 0 0 chr2 7297862 7297900 -245958683 + T-rich Low_complexity Low_complexity 1 38 0 2034 194 27 57 chr2 7301284 7301869 -245954714 - L1MC1 LINE L1 -75 6258 5739 1197 53 0 0 chr2 7301869 7302019 -245954564 - L1PA3 LINE L1 -3 6152 6003 2034 194 27 57 chr2 7302019 7302327 -245954256 - L1MC1 LINE L1 -594 5739 5423 207 283 0 0 chr2 7302775 7302821 -245953762 + (TTG)n Simple_repeat Simple_repeat 2 47 0 257 328 59 8 chr2 7302858 7302977 -245953606 + MIR SINE MIR 101 225 -37 366 330 25 0 chr2 7303330 7303533 -245953050 - MLT1L LTR MaLR 0 615 408 22 0 0 0 chr2 7303717 7303739 -245952844 + AT_rich Low_complexity Low_complexity 1 22 0 34 79 0 0 chr2 7303856 7303932 -245952651 + AT_rich Low_complexity Low_complexity 1 76 0 3277 197 48 17 chr2 7304302 7305070 -245951513 + L1MC1 LINE L1 5542 6333 0 2135 111 7 10 chr2 7305403 7305700 -245950883 - AluSq SINE Alu -17 296 1 413 281 65 41 chr2 7305934 7306180 -245950403 - L1MEd LINE L1 -3679 2450 2199 211 122 41 0 chr2 7306305 7306354 -245950229 + (TA)n Simple_repeat Simple_repeat 1 51 0 630 338 62 48 chr2 7306692 7307174 -245949409 - HAL1 LINE L1 -761 1746 1258 388 309 67 49 chr2 7307213 7307498 -245949085 - L1MEd LINE L1 -5046 1073 784 180 0 0 0 chr2 7308184 7308204 -245948379 + (CAAAAA)n Simple_repeat Simple_repeat 1 20 0 378 252 24 8 chr2 7308410 7308533 -245948050 + Charlie8 DNA MER1_type 79 203 -2214 5149 20 0 0 chr2 7308990 7309575 -245947008 - L1PA3 LINE L1 -5 6150 5566 250 317 111 20 chr2 7311219 7311441 -245945142 + MIR3 SINE MIR 4 251 -11 609 234 19 6 chr2 7311871 7312029 -245944554 - MER58B DNA MER1_type 0 341 182 756 226 34 15 chr2 7312031 7312235 -245944348 + MER20 DNA MER1_type 3 210 -9 529 167 123 14 chr2 7312236 7312374 -245944209 - MER58B DNA MER1_type -152 189 37 37 39 0 0 chr2 7315811 7315862 -245940721 + AT_rich Low_complexity Low_complexity 1 51 0 262 280 167 15 chr2 7316112 7316244 -245940339 + MIR SINE MIR 1 152 -110 2180 146 34 3 chr2 7316697 7317081 -245939502 + MSTA LTR MaLR 33 428 0 245 208 0 38 chr2 7318364 7318417 -245938166 - MER58A DNA MER1_type 0 224 174 1412 158 50 68 chr2 7318425 7318528 -245938055 + AluJb SINE Alu 11 114 -199 2747 71 3 3 chr2 7318528 7318881 -245937702 + THE1A LTR MaLR 3 355 0 1412 158 50 68 chr2 7318881 7319085 -245937498 + AluJb SINE Alu 114 313 0 578 236 54 7 chr2 7319093 7319241 -245937342 - MER58A DNA MER1_type -33 191 37 1907 172 9 78 chr2 7319590 7319837 -245936746 + MSTD LTR MaLR 1 208 -188 420 55 0 0 chr2 7319837 7319892 -245936691 + (CA)n Simple_repeat Simple_repeat 1 55 0 1907 172 9 78 chr2 7319892 7320069 -245936514 + MSTD LTR MaLR 208 396 0 2391 120 13 13 chr2 7320391 7320765 -245935818 - THE1C LTR MaLR -1 374 1 1409 219 22 35 chr2 7320765 7321128 -245935455 - MLT1A1 LTR MaLR -4 361 1 269 323 121 0 chr2 7321982 7322081 -245934502 + L3 LINE CR1 1373 1483 -94 631 245 41 41 chr2 7323064 7323260 -245933323 + MIR SINE MIR 46 241 -21 207 250 0 0 chr2 7323277 7323321 -245933262 - L2 LINE L2 -5 3308 3265 521 165 0 10 chr2 7323609 7323712 -245932871 + GA-rich Low_complexity Low_complexity 3 104 0 302 192 13 51 chr2 7325042 7325120 -245931463 + L1MC4 LINE L1 6615 6689 -1353 444 244 88 40 chr2 7325190 7325440 -245931143 - HAL1b LINE L1 -258 1090 829 251 347 0 24 chr2 7325442 7325566 -245931017 - L2 LINE L2 -942 2372 2252 30 69 0 0 chr2 7326024 7326082 -245930501 + AT_rich Low_complexity Low_complexity 1 58 0 5869 19 17 1 chr2 7326207 7326855 -245929728 - SVA Other Other -3 1383 726 2240 120 11 14 chr2 7326879 7327246 -245929337 - L1MA2 LINE L1 0 6304 5939 1126 252 132 12 chr2 7327744 7328161 -245928422 - MLT1C LTR MaLR 0 467 1 2132 116 34 45 chr2 7328780 7328940 -245927643 + THE1C LTR MaLR 1 161 -214 1977 153 7 0 chr2 7328940 7329228 -245927355 - AluSq SINE Alu -23 290 1 2132 116 34 45 chr2 7329228 7329446 -245927137 + THE1C LTR MaLR 161 375 0 26 30 0 0 chr2 7329554 7329587 -245926996 + AT_rich Low_complexity Low_complexity 1 33 0 2195 110 7 0 chr2 7331303 7331427 -245925156 + AluSg SINE Alu 1 123 -187 462 18 0 0 chr2 7331427 7331482 -245925101 + (CA)n Simple_repeat Simple_repeat 2 56 0 2195 110 7 0 chr2 7331482 7331665 -245924918 + AluSg SINE Alu 123 310 0 191 297 55 22 chr2 7331985 7332076 -245924507 + MIR SINE MIR 116 209 -53 2133 111 7 3 chr2 7332119 7332407 -245924176 - AluSx SINE Alu -23 289 1 776 221 94 35 chr2 7333518 7333800 -245922783 - MER33 DNA MER1_type -30 294 1 397 360 111 5 chr2 7333927 7334232 -245922351 - L2 LINE L2 -270 3002 2667 189 154 0 0 chr2 7334376 7334415 -245922168 + (TGGA)n Simple_repeat Simple_repeat 1 39 0 393 288 156 15 chr2 7334471 7334676 -245921907 - MIR SINE MIR -27 235 2 199 274 71 0 chr2 7334885 7334969 -245921614 - MIR SINE MIR -112 150 61 22 0 0 0 chr2 7335178 7335200 -245921383 + AT_rich Low_complexity Low_complexity 1 22 0 334 255 29 51 chr2 7335391 7335569 -245921014 + MIR SINE MIR 19 192 -59 207 293 109 23 chr2 7335738 7335912 -245920671 - MIR SINE MIR -55 207 19 488 254 48 12 chr2 7336573 7336738 -245919845 + MIR SINE MIR 28 198 -64 998 205 89 13 chr2 7340399 7340712 -245915871 - MER33 DNA MER1_type -7 317 1 409 201 82 50 chr2 7341700 7341828 -245914755 - MER53 DNA DNA -25 164 29 1834 100 37 0 chr2 7341828 7342069 -245914514 - AluSx SINE Alu -20 292 43 409 201 82 50 chr2 7342069 7342099 -245914484 - MER53 DNA DNA -160 29 1 192 357 43 32 chr2 7342409 7342705 -245913878 - L2 LINE L2 -230 3083 2778 1950 169 28 11 chr2 7343164 7343403 -245913180 - MLT1B LTR MaLR 0 390 141 2103 113 0 61 chr2 7343403 7343729 -245912854 + AluSp SINE Alu 1 306 -7 1950 169 28 11 chr2 7343729 7343851 -245912732 - MLT1B LTR MaLR -249 141 23 1522 214 218 4 chr2 7346789 7347279 -245909304 - L1MB8 LINE L1 -1 6177 5583 234 0 0 0 chr2 7347626 7347652 -245908931 + (T)n Simple_repeat Simple_repeat 1 26 0 285 215 83 50 chr2 7348438 7348559 -245908024 - MER96B DNA MER1_type? -261 156 32 205 225 0 0 chr2 7348589 7348629 -245907954 + L2 LINE L2 3266 3305 -8 262 293 41 23 chr2 7348971 7349109 -245907474 + MIR SINE MIR 5 143 -68 197 385 0 10 chr2 7350624 7350728 -245905855 - MIR SINE MIR -114 148 46 240 35 0 0 chr2 7352298 7352327 -245904256 + (CA)n Simple_repeat Simple_repeat 2 30 0 1685 146 55 78 chr2 7352679 7353063 -245903520 + THE1C LTR MaLR 1 375 0 360 301 30 15 chr2 7353091 7353224 -245903359 - MIR SINE MIR -71 191 57 372 66 279 0 chr2 7353809 7353870 -245902713 + MADE1 DNA Mariner 3 80 0 2220 98 24 0 chr2 7354026 7354323 -245902260 + AluSg SINE Alu 1 304 -6 950 199 0 31 chr2 7354361 7354557 -245902026 + AluJo SINE Alu 120 309 -3 181 388 15 0 chr2 7355236 7355303 -245901280 + MIR SINE MIR 21 88 -120 995 305 96 43 chr2 7355655 7355690 -245900893 + L1ME3A LINE L1 2884 2916 -3230 2288 113 3 3 chr2 7355690 7356000 -245900583 + AluY SINE Alu 1 310 -1 995 305 96 43 chr2 7356000 7357344 -245899239 + L1ME3A LINE L1 2916 4335 -1811 22 35 0 0 chr2 7357426 7357455 -245899128 + AT_rich Low_complexity Low_complexity 1 29 0 324 276 111 72 chr2 7357801 7358080 -245898503 + L1ME3A LINE L1 5681 5970 -200 756 20 29 0 chr2 7358272 7358374 -245898209 + (TCTA)n Simple_repeat Simple_repeat 3 107 0 199 349 56 8 chr2 7361153 7361279 -245895304 + L2 LINE L2 3102 3233 -39 398 269 48 21 chr2 7361988 7362133 -245894450 + MIR SINE MIR 102 250 -12 663 149 15 15 chr2 7362336 7362470 -245894113 + L1MB8 LINE L1 6044 6177 -1 216 309 0 12 chr2 7363671 7363752 -245892831 + MIR SINE MIR 177 256 -6 24 0 0 0 chr2 7367855 7367879 -245888704 + AT_rich Low_complexity Low_complexity 1 24 0 1519 234 45 52 chr2 7368017 7368482 -245888101 + MLT1C LTR MaLR 6 467 0 600 40 0 0 chr2 7368866 7368941 -245887642 + (TGG)n Simple_repeat Simple_repeat 2 76 0 959 265 71 58 chr2 7369678 7370006 -245886577 + MER77 LTR ERV1 281 673 -6 1161 204 27 108 chr2 7370434 7370841 -245885742 - MLT1A2 LTR MaLR 0 374 1 624 281 33 54 chr2 7372160 7372402 -245884181 + MIR SINE MIR 16 252 -10 3604 174 73 4 chr2 7372943 7373627 -245882956 + L1MB2 LINE L1 5439 6169 -2 555 191 19 0 chr2 7374723 7374885 -245881698 + GA-rich Low_complexity Low_complexity 2 166 0 352 275 74 11 chr2 7375314 7375384 -245881199 - MIR SINE MIR -16 246 182 2066 176 100 55 chr2 7375384 7375914 -245880669 + MLT2B3 LTR ERVL 1 554 0 352 275 74 11 chr2 7375914 7376032 -245880551 - MIR SINE MIR -80 182 46 2169 132 90 25 chr2 7376202 7376604 -245879979 + MSTA LTR MaLR 1 428 0 184 225 0 127 chr2 7377194 7377218 -245879365 - MER5A DNA MER1_type 0 189 164 2712 86 11 0 chr2 7377218 7377569 -245879014 - THE1A LTR MaLR 0 355 1 11565 96 5 10 chr2 7377569 7379157 -245877426 - THE1A-int LTR MaLR 0 1580 1 2684 91 11 0 chr2 7379157 7379508 -245877075 - THE1A LTR MaLR 0 355 1 184 225 0 127 chr2 7379508 7379552 -245877031 - MER5A DNA MER1_type -22 167 128 183 320 62 23 chr2 7379581 7379709 -245876874 + MER5A DNA MER1_type 55 187 -2 * 684 178 8 0 chr2 7379596 7379725 -245876858 - MER5A DNA MER1_type -59 130 1 395 242 6 19 chr2 7380049 7380206 -245876377 + (TA)n Simple_repeat Simple_repeat 1 155 0 180 353 118 0 chr2 7380704 7380823 -245875760 - L2 LINE L2 0 3313 3181 405 267 17 9 chr2 7381151 7381267 -245875316 - MER5A DNA MER1_type -69 120 4 362 255 101 13 chr2 7381867 7382016 -245874567 - LTR33 LTR ERVL -5 516 355 270 254 0 14 chr2 7383092 7383163 -245873420 + MIR SINE MIR 22 91 -117 1592 243 200 20 chr2 7383462 7384006 -245872577 - MLT1E1 LTR MaLR 0 654 13 5329 118 22 4 chr2 7384888 7385553 -245871030 - L1PA13 LINE L1 0 6163 5479 195 42 0 0 chr2 7385553 7385577 -245871006 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 5329 118 22 4 chr2 7385577 7385715 -245870868 - L1PA13 LINE L1 -684 5479 5345 22 56 0 0 chr2 7386456 7386492 -245870091 + AT_rich Low_complexity Low_complexity 1 36 0 401 375 48 39 chr2 7386535 7386643 -245869940 - L2 LINE L2 -664 2650 2545 2223 107 7 3 chr2 7386643 7386952 -245869631 - AluSq SINE Alu -3 310 1 401 375 48 39 chr2 7386952 7387256 -245869327 - L2 LINE L2 -769 2545 2234 206 271 43 107 chr2 7387657 7387797 -245868786 + L2 LINE L2 2710 2840 -474 212 278 72 31 chr2 7388033 7388130 -245868453 - L2 LINE L2 -641 2673 2573 445 264 0 16 chr2 7388131 7388256 -245868327 - LTR67 LTR ERVL -2 555 433 189 322 252 9 chr2 7389103 7389218 -245867365 + MIR3 SINE MIR 46 188 -20 22 35 0 0 chr2 7389447 7389476 -245867107 + AT_rich Low_complexity Low_complexity 1 29 0 213 65 0 0 chr2 7390796 7390827 -245865756 + (CA)n Simple_repeat Simple_repeat 2 32 0 449 204 25 0 chr2 7391475 7391637 -245864946 + GA-rich Low_complexity Low_complexity 2 167 0 487 348 14 9 chr2 7393976 7394186 -245862397 + MIR SINE MIR 31 241 -21 1189 132 0 0 chr2 7394460 7394627 -245861956 + AluSg/x SINE Alu 133 299 -13 216 243 0 57 chr2 7396072 7396142 -245860441 + MIR SINE MIR 108 173 -89 300 262 138 28 chr2 7396452 7396597 -245859986 - MIR SINE MIR -70 192 32 208 284 27 54 chr2 7397907 7397981 -245858602 - MIR SINE MIR -59 149 78 222 298 18 0 chr2 7399453 7399510 -245857073 - MIR SINE MIR -59 149 92 188 292 106 18 chr2 7399948 7400061 -245856522 + MIR SINE MIR 85 207 -55 8057 213 48 37 chr2 7400435 7404290 -245852293 - L1MC1 LINE L1 0 6613 2801 2590 21 10 0 chr2 7404290 7404579 -245852004 - L1PA4 LINE L1 0 6155 5864 8057 213 48 37 chr2 7404579 7406089 -245850494 - L1MC1 LINE L1 -3812 2801 883 1702 197 43 70 chr2 7406089 7406530 -245850053 + MSTB1 LTR MaLR 4 432 0 8057 213 48 37 chr2 7406530 7407394 -245849189 - L1MC1 LINE L1 -5730 883 30 335 305 30 15 chr2 7408260 7408391 -245848192 - MIR SINE MIR -81 181 49 518 271 45 40 chr2 7410569 7410816 -245845767 + LTR16A LTR ERVL 203 450 0 183 331 96 45 chr2 7411392 7411570 -245845013 - L2 LINE L2 -512 2802 2616 198 0 0 0 chr2 7411981 7412003 -245844580 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 1266 184 53 26 chr2 7412350 7412616 -245843967 + AluJb SINE Alu 1 273 -39 316 325 88 18 chr2 7413103 7413217 -245843366 - MER5B DNA MER1_type -3 175 54 241 299 37 110 chr2 7413126 7413290 -245843293 + MER5A DNA MER1_type 38 189 0 * 2356 114 0 0 chr2 7413748 7414054 -245842529 + AluSp SINE Alu 1 306 -7 348 167 0 0 chr2 7414099 7414171 -245842412 + GA-rich Low_complexity Low_complexity 2 73 0 617 250 43 6 chr2 7414173 7414337 -245842246 + MIR SINE MIR 88 257 -5 300 329 71 52 chr2 7414369 7414834 -245841749 - L1MC4a LINE L1 -1914 5894 5421 227 173 19 0 chr2 7415071 7415123 -245841460 + (TAGA)n Simple_repeat Simple_repeat 3 55 0 245 298 25 0 chr2 7415145 7415266 -245841317 + (TAGA)n Simple_repeat Simple_repeat 4 127 0 243 256 61 24 chr2 7415434 7415516 -245841067 + MIR SINE MIR 62 146 -62 258 295 40 0 chr2 7415615 7415714 -245840869 - MIR SINE MIR -88 120 47 22 35 0 0 chr2 7415952 7415981 -245840602 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr2 7417299 7417320 -245839263 + AT_rich Low_complexity Low_complexity 1 21 0 482 225 152 67 chr2 7417912 7418390 -245838193 + LTR50 LTR ERVL 9 605 -190 340 184 38 0 chr2 7418409 7418496 -245838087 + LTR50 LTR ERVL 435 795 0 647 262 50 54 chr2 7421663 7421961 -245834622 + MER102b DNA MER1_type 37 333 -8 305 222 69 56 chr2 7422253 7422397 -245834186 + L1M4 LINE L1 4129 4274 -1872 283 302 167 49 chr2 7422411 7422809 -245833774 - L2 LINE L2 0 3313 2779 711 281 84 39 chr2 7422912 7423328 -245833255 + LTR16A LTR ERVL 7 441 -9 709 292 112 4 chr2 7423468 7423701 -245832882 - L2 LINE L2 -987 2327 2070 378 329 42 42 chr2 7423732 7424045 -245832538 + L1ME3A LINE L1 5635 5947 -223 1885 139 14 0 chr2 7424180 7424493 -245832090 - AluSx SINE Alu 0 317 1 473 338 29 10 chr2 7424720 7424924 -245831659 - MIR SINE MIR -24 238 31 223 265 60 0 chr2 7425298 7425381 -245831202 - MIR3 SINE MIR -21 187 100 579 267 28 17 chr2 7425418 7425594 -245830989 - MER5B DNA MER1_type 0 178 1 1330 202 5 5 chr2 7425989 7426212 -245830371 - MER58A DNA MER1_type 0 224 2 2025 124 0 0 chr2 7427342 7427659 -245828924 + AluSx SINE Alu 16 332 0 408 336 36 54 chr2 7427984 7428261 -245828322 - L2 LINE L2 0 3272 3001 297 362 52 24 chr2 7430409 7430619 -245825964 + MIR SINE MIR 47 262 0 1735 145 69 0 chr2 7430662 7430952 -245825631 + THE1B LTR MaLR 1 310 -54 674 124 0 0 chr2 7430952 7431049 -245825534 + AluY SINE Alu 213 309 -2 566 69 0 0 chr2 7431052 7431124 -245825459 + THE1B LTR MaLR 293 364 0 198 91 0 0 chr2 7431764 7431797 -245824786 + (CA)n Simple_repeat Simple_repeat 1 33 0 1986 110 43 17 chr2 7432482 7432815 -245823768 - AluSc SINE Alu 0 341 1 442 258 11 84 chr2 7432847 7433025 -245823558 - MLT1J1 LTR MaLR -236 210 46 32 57 0 0 chr2 7433790 7433843 -245822740 + AT_rich Low_complexity Low_complexity 1 53 0 2028 130 0 13 chr2 7434257 7434557 -245822026 - AluSx SINE Alu -16 296 1 378 354 99 9 chr2 7434928 7435151 -245821432 - MIR SINE MIR 0 262 20 693 254 138 27 chr2 7435413 7435673 -245820910 - LTR40a LTR ERVL -120 399 111 291 321 109 12 chr2 7435922 7436262 -245820321 + L1ME4a LINE L1 5542 5914 -207 2064 98 0 17 chr2 7436718 7437050 -245819533 - AluY SINE Alu 0 327 1 838 209 82 19 chr2 7440260 7440466 -245816117 + MER20 DNA MER1_type 1 219 0 293 280 41 113 chr2 7440467 7440671 -245815912 - MIR SINE MIR -40 168 11 258 175 16 63 chr2 7442176 7442239 -245814344 - L2 LINE L2 -7 3265 3206 389 352 6 0 chr2 7443278 7443457 -245813126 + (TG)n Simple_repeat Simple_repeat 1 180 0 209 272 136 47 chr2 7444459 7444672 -245811911 + MIR SINE MIR 3 234 -28 23 54 0 0 chr2 7444963 7445000 -245811583 + AT_rich Low_complexity Low_complexity 1 37 0 514 211 0 10 chr2 7445133 7445237 -245811346 + MER63 DNA MER1_type 21 749 -87 1755 161 10 3 chr2 7446517 7446808 -245809775 - AluSx SINE Alu -19 293 1 238 135 0 0 chr2 7446808 7446845 -245809738 + MSTB LTR MaLR 386 422 -4 259 267 57 19 chr2 7446895 7447000 -245809583 - L1ME LINE L1 -420 5701 5593 188 236 55 0 chr2 7447256 7447311 -245809272 + L2 LINE L2 3254 3311 -2 1741 197 120 63 chr2 7447643 7448201 -245808382 - L1MD2 LINE L1 -10 6743 6154 1877 214 17 74 chr2 7448276 7449039 -245807544 - L1MD2 LINE L1 -488 6148 5416 6549 240 88 40 chr2 7449404 7450417 -245806166 - L1MD2 LINE L1 -1383 5157 4194 6014 104 24 1 chr2 7450417 7451400 -245805183 + L1PA10 LINE L1 5158 6163 -5 6549 240 88 40 chr2 7451400 7453657 -245802926 - L1MD2 LINE L1 -2346 4194 1623 2411 66 7 0 chr2 7453657 7453958 -245802625 + AluY SINE Alu 1 303 -8 6549 240 88 40 chr2 7453958 7455053 -245801530 - L1MD2 LINE L1 -4917 1623 582 207 0 0 0 chr2 7455663 7455686 -245800897 + (T)n Simple_repeat Simple_repeat 1 23 0 28 48 0 0 chr2 7455976 7456018 -245800565 + AT_rich Low_complexity Low_complexity 1 42 0 2416 69 0 0 chr2 7456251 7456539 -245800044 - AluY SINE Alu -12 299 12 362 285 75 100 chr2 7456547 7456936 -245799647 - MLT1J LTR MaLR -132 379 1 920 105 0 0 chr2 7457256 7457389 -245799194 - L1MA3 LINE L1 0 6305 6173 2289 105 0 13 chr2 7459498 7459811 -245796772 + AluSg SINE Alu 1 309 -1 429 302 166 27 chr2 7460124 7460462 -245796121 + MLT1I LTR MaLR 19 403 -6 212 344 21 52 chr2 7460525 7460717 -245795866 - MIR SINE MIR -71 191 6 2459 77 0 0 chr2 7460917 7461228 -245795355 + AluY SINE Alu 1 311 0 2332 149 22 75 chr2 7464125 7464616 -245791967 + MLT1C LTR MaLR 1 465 -2 240 254 0 30 chr2 7466555 7466622 -245789961 + GA-rich Low_complexity Low_complexity 1 65 0 2190 105 3 35 chr2 7467073 7467388 -245789195 + AluSx SINE Alu 1 305 -7 323 236 25 70 chr2 7467781 7467938 -245788645 + L1M4 LINE L1 3077 3226 -2920 314 344 133 16 chr2 7467967 7468403 -245788180 + L1M4 LINE L1 4005 4491 -1655 257 255 213 58 chr2 7469331 7469519 -245787064 + L2 LINE L2 989 1205 -2109 10163 206 52 15 chr2 7469690 7470821 -245785762 + L1 LINE L1 2220 3308 -2838 1631 170 19 47 chr2 7470821 7471139 -245785444 + AluJb SINE Alu 1 309 -3 10163 206 52 15 chr2 7471139 7472506 -245784077 + L1 LINE L1 3308 4810 -1336 788 148 0 0 chr2 7472507 7472642 -245783941 + L1 LINE L1 3625 3759 -2387 227 205 0 0 chr2 7472661 7472700 -245783883 - AluJ/monomer SINE Alu -260 40 2 2959 220 59 7 chr2 7472702 7473444 -245783139 + L1MD2 LINE L1 5576 6356 -3 3211 264 105 27 chr2 7473473 7475378 -245781205 + L1ME1 LINE L1 2362 4410 -1805 2723 221 71 60 chr2 7475388 7475877 -245780706 + L1ME1 LINE L1 4805 5287 -948 195 42 0 0 chr2 7475877 7475901 -245780682 + (TA)n Simple_repeat Simple_repeat 2 25 0 2723 221 71 60 chr2 7475901 7476477 -245780106 + L1ME1 LINE L1 5287 5898 -337 2360 124 23 3 chr2 7476477 7476831 -245779752 + THE1B LTR MaLR 4 364 0 2723 221 71 60 chr2 7476831 7477165 -245779418 + L1ME1 LINE L1 5898 6227 -8 956 113 17 17 chr2 7477280 7477322 -245779261 + (GGAA)n Simple_repeat Simple_repeat 1 219 0 956 113 17 17 chr2 7477322 7477499 -245779084 + (GGAA)n Simple_repeat Simple_repeat 3 179 0 961 129 23 4 chr2 7477759 7477982 -245778601 + GA-rich Low_complexity Low_complexity 3 228 0 531 103 19 37 chr2 7477982 7478089 -245778494 + (GAAAA)n Simple_repeat Simple_repeat 4 108 0 221 320 0 27 chr2 7479551 7479626 -245776957 + L2 LINE L2 3190 3262 -10 212 234 0 0 chr2 7479684 7479731 -245776852 + (TG)n Simple_repeat Simple_repeat 2 48 0 506 257 33 26 chr2 7480498 7480650 -245775933 - MIR SINE MIR -46 216 64 23 33 0 0 chr2 7480671 7480701 -245775882 + AT_rich Low_complexity Low_complexity 1 30 0 808 282 32 70 chr2 7481107 7481519 -245775064 + L2 LINE L2 2915 3310 -3 2747 208 10 32 chr2 7481732 7481913 -245774670 + L1MC1 LINE L1 4982 5166 -1167 1991 109 40 0 chr2 7481913 7482189 -245774394 + AluSx SINE Alu 13 299 -13 2747 208 10 32 chr2 7482189 7482831 -245773752 + L1MC1 LINE L1 5166 5916 -417 630 331 71 21 chr2 7482832 7483161 -245773422 - MLT1G LTR MaLR -289 301 1 1271 266 35 36 chr2 7483286 7483672 -245772911 + L1M4 LINE L1 2971 3357 -2789 2242 89 0 20 chr2 7483672 7483976 -245772607 - AluY SINE Alu -13 298 1 1271 266 35 36 chr2 7483976 7484220 -245772363 + L1M4 LINE L1 3357 3600 -2546 305 221 0 11 chr2 7484220 7484315 -245772268 + (TA)n Simple_repeat Simple_repeat 1 94 0 818 94 109 0 chr2 7484316 7484444 -245772139 + AluY SINE Alu 39 180 -131 30 83 0 0 chr2 7484444 7484480 -245772103 + AT_rich Low_complexity Low_complexity 1 36 0 25 0 0 0 chr2 7484539 7484564 -245772019 + AT_rich Low_complexity Low_complexity 1 25 0 261 0 0 0 chr2 7484576 7484605 -245771978 + (TA)n Simple_repeat Simple_repeat 2 30 0 841 227 14 5 chr2 7484663 7484870 -245771713 - L1ME1 LINE L1 -223 5943 5735 959 126 0 0 chr2 7485021 7485172 -245771411 + L1PA15 LINE L1 6011 6161 -4 262 89 18 18 chr2 7486291 7486347 -245770236 + (TTTG)n Simple_repeat Simple_repeat 2 57 0 275 250 29 0 chr2 7486547 7486615 -245769968 - MIR SINE MIR -108 154 85 2029 183 22 79 chr2 7487731 7488224 -245768359 - MLT1C LTR MaLR 0 467 3 220 236 0 18 chr2 7488660 7488715 -245767868 + A-rich Low_complexity Low_complexity 2 55 0 189 183 300 0 chr2 7489319 7489379 -245767204 + L2 LINE L2 3204 3281 -32 195 100 0 0 chr2 7489446 7489476 -245767107 + (TGAA)n Simple_repeat Simple_repeat 4 33 0 2882 176 64 3 chr2 7489617 7490388 -245766195 + L1M2 LINE L1 4673 5496 -743 494 170 7 35 chr2 7490530 7490671 -245765912 + GA-rich Low_complexity Low_complexity 2 138 0 402 299 75 31 chr2 7492205 7492489 -245764094 - L1MDa LINE L1 -3854 2686 2395 2140 171 15 20 chr2 7492886 7493370 -245763213 - Tigger2 DNA MER2_type 0 2718 2 857 158 23 0 chr2 7493704 7493881 -245762702 - L1MA7 LINE L1 0 6291 6111 369 384 31 40 chr2 7494239 7494463 -245762120 - L1MDa LINE L1 -5476 1054 833 315 0 0 0 chr2 7494806 7494841 -245761742 + (CA)n Simple_repeat Simple_repeat 2 36 0 231 125 0 0 chr2 7494841 7494881 -245761702 + (GA)n Simple_repeat Simple_repeat 1 40 0 423 239 26 84 chr2 7495441 7495596 -245760987 - MLT1J LTR MaLR -31 480 335 246 345 63 21 chr2 7496137 7496279 -245760304 + MIR SINE MIR 21 168 -94 202 314 144 0 chr2 7496753 7496871 -245759712 + L2 LINE L2 3179 3313 0 347 261 42 42 chr2 7498154 7498173 -245758410 - L1ME4a LINE L1 -213 5908 5890 2041 147 3 0 chr2 7498173 7498466 -245758117 - AluSx SINE Alu -18 294 1 347 261 42 42 chr2 7498466 7498588 -245757995 - L1ME4a LINE L1 -230 5891 5767 1456 227 164 41 chr2 7499074 7499753 -245756830 + LTR41 LTR ERVL 1 762 -11 21 0 0 0 chr2 7500062 7500083 -245756500 + AT_rich Low_complexity Low_complexity 1 21 0 592 286 6 6 chr2 7500243 7500425 -245756158 + MER58A DNA MER1_type 43 224 0 332 350 127 0 chr2 7500551 7500771 -245755812 + MIR SINE MIR 2 249 -13 192 262 66 16 chr2 7500824 7500885 -245755698 - MIR SINE MIR -188 74 11 1412 211 156 70 chr2 7501131 7501733 -245754850 + MLT1E1 LTR MaLR 1 654 0 1711 262 44 30 chr2 7502396 7503006 -245753577 - MLT1E2 LTR MaLR -7 619 1 207 391 64 9 chr2 7504243 7504353 -245752230 + L2 LINE L2 3137 3252 -20 235 367 143 35 chr2 7506590 7507015 -245749568 - L2 LINE L2 -661 2653 2183 209 286 18 0 chr2 7507717 7507773 -245748810 + MER5A DNA MER1_type 9 65 -124 28 29 0 0 chr2 7508215 7508250 -245748333 + AT_rich Low_complexity Low_complexity 1 35 0 216 256 105 12 chr2 7509608 7509694 -245746889 - MIR SINE MIR -61 147 54 295 263 12 12 chr2 7510626 7510706 -245745877 - MIR3 SINE MIR -31 177 98 21 36 0 0 chr2 7512015 7512043 -245744540 + AT_rich Low_complexity Low_complexity 1 28 0 2437 88 3 3 chr2 7513322 7513629 -245742954 - AluSq SINE Alu -6 307 1 343 333 62 23 chr2 7513740 7513917 -245742666 + MIR SINE MIR 46 229 -33 588 197 79 17 chr2 7514113 7514291 -245742292 - MER53 DNA DNA 0 189 1 1938 145 26 57 chr2 7514831 7515217 -245741366 - THE1C LTR MaLR -1 374 1 2281 113 0 3 chr2 7515734 7516035 -245740548 + AluSx SINE Alu 1 300 -12 462 157 0 0 chr2 7516562 7516645 -245739938 + CT-rich Low_complexity Low_complexity 2 84 0 3041 82 42 5 chr2 7516734 7517162 -245739421 - MLT2A1 LTR ERVL 0 444 1 1552 232 132 5 chr2 7517189 7517637 -245738946 - MLT1D LTR MaLR 0 505 1 1821 161 3 25 chr2 7518393 7518709 -245737874 + AluSx SINE Alu 1 309 -3 438 215 27 102 chr2 7518965 7519151 -245737432 - MER69A DNA AcHobo 0 177 6 474 224 5 170 chr2 7519256 7519479 -245737104 + MER5A DNA MER1_type 1 186 -3 5541 62 19 27 chr2 7520393 7521165 -245735418 + MER4E LTR ERV1 1 766 0 1774 225 66 4 chr2 7522399 7522871 -245733712 - L1MC2 LINE L1 -18 6326 5826 2237 242 21 5 chr2 7522878 7523530 -245733053 - L1MC2 LINE L1 -943 5203 4541 351 100 43 0 chr2 7523541 7523611 -245732972 + (TA)n Simple_repeat Simple_repeat 2 74 0 448 104 0 0 chr2 7523669 7523736 -245732847 - L1PA5 LINE L1 -6 6148 6082 2000 24 8 0 chr2 7523736 7523983 -245732600 + L1P2 LINE L1 5369 5617 -537 * 5296 264 22 17 chr2 7523977 7526001 -245730582 - L1MC2 LINE L1 -1589 4557 2524 487 371 79 21 chr2 7526345 7526763 -245729820 - L2 LINE L2 -794 2520 2079 2702 101 15 2 chr2 7527290 7527687 -245728896 - L1MA1 LINE L1 -9 6293 5892 2155 261 69 28 chr2 7527813 7528941 -245727642 - L1ME1 LINE L1 -80 6086 4913 2105 121 3 13 chr2 7530393 7530707 -245725876 - AluY SINE Alu 0 311 1 416 317 194 30 chr2 7532060 7532492 -245724091 - L2 LINE L2 -7 3306 2804 2263 122 42 11 chr2 7532497 7532850 -245723733 - THE1B LTR MaLR 0 364 1 2795 161 73 19 chr2 7532958 7533603 -245722980 + L1MB3 LINE L1 5497 6176 -7 248 258 39 62 chr2 7533609 7533737 -245722846 - L2 LINE L2 -609 2705 2581 694 309 69 69 chr2 7533778 7533888 -245722695 - L2 LINE L2 -1504 1810 1701 207 0 0 0 chr2 7533888 7533911 -245722672 + (TG)n Simple_repeat Simple_repeat 1 23 0 694 309 69 69 chr2 7533911 7534382 -245722201 - L2 LINE L2 -1612 1702 1229 188 244 0 0 chr2 7534397 7534438 -245722145 - MIR SINE MIR -71 191 151 188 217 206 33 chr2 7534619 7534711 -245721872 - MIR SINE MIR -141 121 14 5290 160 10 15 chr2 7535638 7536805 -245719778 + L1MA4 LINE L1 5129 6289 -11 260 212 182 15 chr2 7536937 7537069 -245719514 + L1ME LINE L1 5492 5645 -476 295 250 0 0 chr2 7537476 7537544 -245719039 + MIR SINE MIR 176 243 -19 274 221 26 26 chr2 7537626 7537703 -245718880 + CT-rich Low_complexity Low_complexity 3 79 0 23 0 0 0 chr2 7538906 7538929 -245717654 + AT_rich Low_complexity Low_complexity 1 23 0 190 230 46 92 chr2 7539048 7539135 -245717448 + L2 LINE L2 3231 3313 0 201 356 53 53 chr2 7539215 7539347 -245717236 + L2 LINE L2 3137 3268 -4 1283 226 3 66 chr2 7540471 7540789 -245715794 + AluJb SINE Alu 14 311 -1 474 274 48 12 chr2 7541154 7541322 -245715261 + MLT1I LTR MaLR 201 374 -35 480 198 0 0 chr2 7541324 7541405 -245715178 - FLAM_A SINE Alu -36 106 26 1257 226 54 11 chr2 7541557 7541907 -245714676 - MLT1A1 LTR MaLR 0 365 1 349 309 147 6 chr2 7542612 7542811 -245713772 - MIR SINE MIR -11 251 27 3448 38 38 0 chr2 7542991 7543442 -245713141 + L1P LINE L1 4545 5012 -1134 7657 148 11 46 chr2 7544731 7546215 -245710368 - THE1C-int LTR MaLR -145 1435 4 1761 144 79 20 chr2 7546218 7546572 -245710011 - THE1C LTR MaLR 0 375 1 326 296 82 60 chr2 7546928 7547161 -245709422 + MIR SINE MIR 20 257 -5 1421 248 86 9 chr2 7547197 7547652 -245708931 - MLT1E2 LTR MaLR 0 626 137 182 269 31 125 chr2 7547816 7547976 -245708607 + MIR SINE MIR 68 212 -50 26 0 0 0 chr2 7548109 7548135 -245708448 + AT_rich Low_complexity Low_complexity 1 26 0 12878 167 56 10 chr2 7548136 7554093 -245702490 - L1PB1 LINE L1 -1 6866 636 994 183 5 0 chr2 7554095 7554292 -245702291 - L1PB1 LINE L1 -6663 200 3 184 315 0 19 chr2 7554829 7554883 -245701700 + MIR SINE MIR 23 75 -187 217 320 57 41 chr2 7555182 7555304 -245701279 - MIR SINE MIR -137 125 2 1379 246 47 27 chr2 7556639 7557087 -245699496 + LTR40b LTR ERVL 6 462 0 290 215 31 0 chr2 7557149 7557214 -245699369 + HERVL40 LTR ERVL 2830 2896 -2634 845 265 13 22 chr2 7558304 7558635 -245697948 + HERVL40 LTR ERVL 2779 5505 -25 1107 276 63 15 chr2 7558657 7559067 -245697516 + LTR40b LTR ERVL 1 430 -32 433 257 138 84 chr2 7559091 7559387 -245697196 + L2 LINE L2 2994 3305 -8 2238 119 0 0 chr2 7560885 7561179 -245695404 + AluSg SINE Alu 1 294 -16 312 296 136 12 chr2 7561434 7561603 -245694980 - L1ME2 LINE L1 -226 5938 5749 201 262 0 0 chr2 7563416 7563458 -245693125 + T-rich Low_complexity Low_complexity 3 44 0 662 311 19 0 chr2 7564442 7564654 -245691929 - MIR SINE MIR 0 262 47 364 355 11 26 chr2 7565629 7565818 -245690765 - MER5A DNA MER1_type -3 186 1 1385 259 25 57 chr2 7566272 7567005 -245689578 - L1M4 LINE L1 -2203 4179 3471 2111 132 0 0 chr2 7567184 7567472 -245689111 + AluSx SINE Alu 1 288 -24 26 30 0 0 chr2 7567497 7567530 -245689053 + AT_rich Low_complexity Low_complexity 1 33 0 334 246 165 50 chr2 7567530 7567759 -245688824 - L1ME LINE L1 -5477 593 329 186 43 0 0 chr2 7567759 7567782 -245688801 + (TTCTC)n Simple_repeat Simple_repeat 2 24 0 334 246 165 50 chr2 7567782 7567812 -245688771 - L1ME LINE L1 -5741 329 304 490 281 25 20 chr2 7567824 7568020 -245688563 - L1ME LINE L1 -5867 203 7 245 325 17 38 chr2 7568108 7568348 -245688235 - L1MEc LINE L1 -4781 1436 1202 1191 218 128 22 chr2 7568358 7568725 -245687858 + LTR52 LTR ERVL 1 406 -15 375 336 40 57 chr2 7568834 7569999 -245686584 - L1MEc LINE L1 -5176 1220 76 425 224 9 9 chr2 7570509 7570616 -245685967 + L1M4 LINE L1 4898 5004 -1142 224 308 112 65 chr2 7570767 7570936 -245685647 - L2 LINE L2 -158 3114 2938 248 230 143 0 chr2 7571871 7571997 -245684586 + L1ME4a LINE L1 5977 6120 -1 32 86 0 0 chr2 7572047 7572128 -245684455 + AT_rich Low_complexity Low_complexity 1 81 0 467 89 0 13 chr2 7572940 7573019 -245683564 + (GA)n Simple_repeat Simple_repeat 1 78 0 875 186 94 144 chr2 7573019 7573400 -245683183 - MLT1A1 LTR MaLR -3 362 1 218 200 0 20 chr2 7573400 7573450 -245683133 + GA-rich Low_complexity Low_complexity 1 49 0 1431 50 0 0 chr2 7573491 7573671 -245682912 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 243 88 0 0 chr2 7573671 7573705 -245682878 + (GGGA)n Simple_repeat Simple_repeat 1 34 0 295 250 0 93 chr2 7574699 7574760 -245681823 - L2 LINE L2 -38 3275 3227 2074 169 25 0 chr2 7574760 7575114 -245681469 + THE1B LTR MaLR 2 364 0 295 250 0 93 chr2 7575114 7575160 -245681423 - L2 LINE L2 -86 3227 3178 206 337 11 11 chr2 7575519 7575614 -245680969 - L2 LINE L2 -571 2743 2649 1776 181 68 32 chr2 7575855 7576296 -245680287 - LTR2B LTR ERV1 0 490 34 955 322 123 4 chr2 7576678 7577132 -245679451 + L2 LINE L2 2208 2715 -599 21 36 0 0 chr2 7577133 7577161 -245679422 + AT_rich Low_complexity Low_complexity 1 28 0 301 349 90 42 chr2 7577569 7577758 -245678825 - L2 LINE L2 0 3272 3075 359 195 0 12 chr2 7578315 7578397 -245678186 - L1MA5 LINE L1 -6 6294 6214 1297 194 3 3 chr2 7578397 7578681 -245677902 + L1 LINE L1 4960 5243 -903 183 333 0 0 chr2 7579997 7580060 -245676523 + L2 LINE L2 3176 3238 -75 5290 66 25 29 chr2 7581731 7582500 -245674083 - MER4E LTR ERV1 0 766 1 561 240 5 163 chr2 7583411 7583632 -245672951 - MER5A DNA MER1_type -3 186 1 430 192 30 114 chr2 7583737 7583904 -245672679 + MER69A DNA AcHobo 6 158 -19 429 137 26 0 chr2 7583947 7584064 -245672519 + (TA)n Simple_repeat Simple_repeat 1 120 0 208 356 0 11 chr2 7584348 7584438 -245672145 + L2 LINE L2 3213 3301 -12 358 328 78 10 chr2 7584520 7584724 -245671859 - MIR SINE MIR -39 223 6 2328 105 3 0 chr2 7584761 7585065 -245671518 + AluSp SINE Alu 4 308 -5 525 145 37 0 chr2 7586043 7586241 -245670342 + (TA)n Simple_repeat Simple_repeat 1 205 0 35 0 0 0 chr2 7586215 7586250 -245670333 + AT_rich Low_complexity Low_complexity 1 35 0 * 205 293 158 12 chr2 7588450 7588532 -245668051 - L2 LINE L2 -4 3268 3175 23 0 0 0 chr2 7588771 7588794 -245667789 + AT_rich Low_complexity Low_complexity 1 23 0 225 191 0 0 chr2 7589369 7589411 -245667172 + (CA)n Simple_repeat Simple_repeat 2 43 0 1977 147 7 0 chr2 7590097 7590390 -245666193 - AluSx SINE Alu -17 295 1 721 242 28 22 chr2 7590479 7590661 -245665922 + MER5A DNA MER1_type 1 183 -6 513 139 13 0 chr2 7591299 7591378 -245665205 + MADE1 DNA Mariner 1 80 0 196 333 26 9 chr2 7591422 7591536 -245665047 - MIR3 SINE MIR -6 202 87 504 287 187 5 chr2 7591708 7591917 -245664666 - Charlie8 DNA MER1_type -2161 256 10 343 333 0 0 chr2 7592260 7592350 -245664233 - MER5B DNA MER1_type -25 153 64 21 0 0 0 chr2 7593150 7593171 -245663412 + AT_rich Low_complexity Low_complexity 1 21 0 694 315 58 46 chr2 7593514 7593930 -245662653 - L2 LINE L2 -804 2510 2090 225 180 0 0 chr2 7593943 7593993 -245662590 + (TA)n Simple_repeat Simple_repeat 2 51 0 184 284 149 0 chr2 7593996 7594130 -245662453 + L2 LINE L2 3098 3251 -62 326 298 114 46 chr2 7594278 7595938 -245660645 + L1M2 LINE L1 3806 5573 -584 300 304 163 28 chr2 7595951 7596240 -245660343 + L1ME3A LINE L1 5619 5946 -224 3329 129 18 60 chr2 7596659 7597209 -245659374 - MER1A DNA MER1_type 0 527 1 670 314 9 14 chr2 7598261 7598481 -245658102 + MIR SINE MIR 31 249 -13 228 35 0 0 chr2 7599700 7599729 -245656854 + (TG)n Simple_repeat Simple_repeat 1 29 0 2259 149 21 21 chr2 7600103 7600478 -245656105 - THE1C LTR MaLR 0 375 1 497 299 35 70 chr2 7600876 7601271 -245655312 - L1MC/D LINE L1 -330 5791 5411 255 150 0 0 chr2 7601906 7601946 -245654637 + L2 LINE L2 3255 3294 -19 1107 153 0 0 chr2 7602493 7602677 -245653906 - AluSg/x SINE Alu 0 314 131 363 268 53 72 chr2 7602829 7603038 -245653545 - MLT1I LTR MaLR -14 395 191 327 49 0 0 chr2 7603305 7603346 -245653237 + (TC)n Simple_repeat Simple_repeat 1 41 0 246 32 0 0 chr2 7603345 7603376 -245653207 + (CA)n Simple_repeat Simple_repeat 1 31 0 * 2155 113 0 7 chr2 7604055 7604347 -245652236 + AluSg SINE Alu 1 290 -20 285 292 0 21 chr2 7604434 7604530 -245652053 - MLT1J LTR MaLR -145 366 273 259 300 11 11 chr2 7604591 7604681 -245651902 - MLT1L LTR MaLR -354 261 172 1841 131 34 14 chr2 7604709 7605000 -245651583 - AluJo SINE Alu -4 308 12 484 295 62 29 chr2 7605140 7605381 -245651202 + MIR SINE MIR 2 250 -12 393 319 223 15 chr2 7605739 7606325 -245650258 + L2 LINE L2 2593 3308 -5 291 318 70 0 chr2 7607459 7607588 -245648995 - MIR SINE MIR -75 187 50 693 143 9 9 chr2 7607752 7607864 -245648719 - AluSg/x SINE Alu -12 300 189 1396 176 36 112 chr2 7608660 7609053 -245647530 + MLT1A1 LTR MaLR 3 365 0 351 229 201 14 chr2 7609186 7609330 -245647253 + MIR SINE MIR 22 192 -70 208 361 0 10 chr2 7612985 7613082 -245643501 + L2 LINE L2 3168 3263 -50 522 284 36 105 chr2 7613339 7613701 -245642882 + MLT1I LTR MaLR 71 407 -2 227 315 120 9 chr2 7614051 7614159 -245642424 - L2 LINE L2 0 3313 3194 632 228 55 22 chr2 7614164 7614346 -245642237 + MER3 DNA MER1_type 1 141 -68 309 281 110 44 chr2 7614584 7614901 -245641682 - L2 LINE L2 -126 3187 2850 25 31 0 0 chr2 7615210 7615242 -245641341 + AT_rich Low_complexity Low_complexity 1 32 0 32 0 0 0 chr2 7615954 7615986 -245640597 + AT_rich Low_complexity Low_complexity 1 32 0 1609 196 7 4 chr2 7615988 7616269 -245640314 - AluJo SINE Alu -30 282 1 305 248 137 0 chr2 7618274 7618391 -245638192 + L2 LINE L2 2060 2192 -1122 839 287 90 61 chr2 7618500 7618544 -245638039 + L2 LINE L2 2575 2616 -697 1032 269 108 70 chr2 7618544 7619071 -245637512 + MLT1H LTR MaLR 1 547 -2 839 287 90 61 chr2 7619071 7619734 -245636849 + L2 LINE L2 2616 3313 0 2163 140 33 36 chr2 7619848 7620212 -245636371 - THE1B LTR MaLR -1 363 1 22 0 0 0 chr2 7620348 7620370 -245636213 + AT_rich Low_complexity Low_complexity 1 22 0 525 324 155 44 chr2 7620662 7621509 -245635074 + L3 LINE CR1 634 1574 -3 495 348 79 12 chr2 7621853 7622106 -245634477 + L3 LINE CR1 364 633 -944 382 279 82 123 chr2 7622265 7622365 -245634218 + L3 LINE CR1 931 1034 -543 2044 126 0 3 chr2 7622365 7622650 -245633933 + AluSc SINE Alu 1 284 -25 315 0 0 0 chr2 7622654 7622689 -245633894 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 382 279 82 123 chr2 7622689 7622924 -245633659 + L3 LINE CR1 1037 1257 -320 266 283 57 9 chr2 7624899 7625005 -245631578 - MIR SINE MIR -47 215 105 429 305 92 17 chr2 7625167 7625341 -245631242 - MIR SINE MIR -28 234 48 271 396 35 30 chr2 7626892 7627061 -245629522 + MIR3 SINE MIR 8 177 -31 248 323 32 0 chr2 7627274 7627367 -245629216 - MIR SINE MIR -76 186 91 230 252 50 59 chr2 7627692 7627811 -245628772 - MIR SINE MIR -29 233 116 328 278 56 76 chr2 7627965 7628267 -245628316 + MLT1I LTR MaLR 97 392 -17 27 22 0 22 chr2 7628494 7628515 -245628068 + AT_rich Low_complexity Low_complexity 1 21 -23 2205 97 7 0 chr2 7628515 7628804 -245627779 - AluSg SINE Alu -19 291 1 27 22 0 22 chr2 7628804 7628827 -245627756 + AT_rich Low_complexity Low_complexity 21 44 0 373 324 9 0 chr2 7629500 7629611 -245626972 + MER81 DNA DNA 3 114 0 364 273 23 0 chr2 7629906 7629994 -245626589 + MER5B DNA MER1_type 17 106 -72 184 308 0 0 chr2 7630051 7630103 -245626480 + MER5B DNA MER1_type 126 177 -1 2677 215 21 57 chr2 7631244 7631871 -245624712 + MER77 LTR ERV1 2 605 0 2130 149 41 3 chr2 7631896 7632238 -245624345 - THE1A LTR MaLR 0 355 1 12009 106 11 0 chr2 7632238 7633800 -245622783 - THE1A-int LTR MaLR 0 1580 1 2423 119 35 6 chr2 7633801 7634145 -245622438 - THE1A LTR MaLR -1 354 1 651 291 29 107 chr2 7634858 7635380 -245621203 + MER34 LTR ERV1 1 481 -61 1371 186 41 11 chr2 7635486 7635755 -245620828 - AluJb SINE Alu -24 288 12 2653 108 6 0 chr2 7635755 7636108 -245620475 - THE1A LTR MaLR 0 355 1 12322 95 10 1 chr2 7636108 7637672 -245618911 - THE1A-int LTR MaLR 0 1580 3 2544 108 35 3 chr2 7637674 7638018 -245618565 - THE1A LTR MaLR 0 355 1 1706 178 3 3 chr2 7639262 7639548 -245617035 - AluJb SINE Alu -11 301 16 198 288 51 0 chr2 7639748 7639807 -245616776 + L2 LINE L2 3252 3313 0 218 377 28 0 chr2 7640486 7640592 -245615991 - L2 LINE L2 -5 3308 3200 249 128 0 0 chr2 7640992 7641039 -245615544 + (TG)n Simple_repeat Simple_repeat 2 48 0 287 319 109 57 chr2 7641389 7641775 -245614808 - L2 LINE L2 -8 3305 2900 21 0 0 0 chr2 7642327 7642348 -245614235 + AT_rich Low_complexity Low_complexity 1 21 0 221 160 0 20 chr2 7642589 7642639 -245613944 + CT-rich Low_complexity Low_complexity 3 51 0 914 280 114 15 chr2 7642696 7643305 -245613278 - L1ME3A LINE L1 -226 5944 5262 2140 131 111 57 chr2 7643381 7643787 -245612796 - MSTA LTR MaLR 0 428 1 1562 226 30 117 chr2 7644174 7645013 -245611570 - L1ME3A LINE L1 -1483 4663 3898 4263 165 20 17 chr2 7645013 7645728 -245610855 + MER50 LTR ERV1 1 717 -17 659 251 53 5 chr2 7645733 7645940 -245610643 - L1ME3A LINE L1 -2254 3892 3676 691 213 38 6 chr2 7645941 7646101 -245610482 - LTR52 LTR ERVL -2 419 255 918 251 109 34 chr2 7646229 7646795 -245609788 - L1ME3A LINE L1 -2468 3678 3070 453 220 159 28 chr2 7647691 7647873 -245608710 - L1M4 LINE L1 -1479 4667 4462 304 302 163 6 chr2 7647984 7648156 -245608427 - L3 LINE CR1 -97 1480 1282 203 217 65 0 chr2 7648819 7648865 -245607718 - MIR SINE MIR -88 174 126 228 319 34 25 chr2 7649110 7649229 -245607354 - MIR SINE MIR -34 228 109 2195 172 40 27 chr2 7649229 7649772 -245606811 + MLT2A2 LTR ERVL 1 554 0 4020 154 53 80 chr2 7649870 7650674 -245605909 - LTR1 LTR ERV1 0 785 3 2145 156 21 32 chr2 7650986 7651365 -245605218 - THE1C LTR MaLR 0 375 1 2807 95 8 0 chr2 7652000 7652359 -245604224 + THE1B LTR MaLR 1 362 -2 246 235 73 0 chr2 7652434 7652502 -245604081 - MIR SINE MIR -117 91 19 1614 114 5 0 chr2 7654748 7654967 -245601616 + AluSq SINE Alu 78 297 -16 734 260 29 19 chr2 7656300 7656508 -245600075 - MER63A DNA MER1_type 0 210 1 387 0 0 0 chr2 7656802 7656845 -245599738 + (CA)n Simple_repeat Simple_repeat 1 43 0 27 29 0 0 chr2 7658986 7659020 -245597563 + AT_rich Low_complexity Low_complexity 1 34 0 2901 198 101 26 chr2 7659478 7660219 -245596364 + MER63D DNA MER1_type 1 797 -264 564 229 0 0 chr2 7660217 7660322 -245596261 + MER63D DNA MER1_type 954 1058 -2 * 213 39 0 0 chr2 7661044 7661070 -245595513 + (TTTTG)n Simple_repeat Simple_repeat 2 27 0 182 36 0 36 chr2 7661663 7661691 -245594892 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 198 299 42 49 chr2 7661881 7662025 -245594558 + MIR SINE MIR 20 162 -100 237 257 138 18 chr2 7663267 7663376 -245593207 + L3 LINE CR1 1406 1527 -50 218 235 20 0 chr2 7666339 7666390 -245590193 + CT-rich Low_complexity Low_complexity 3 54 0 363 314 109 46 chr2 7667175 7667313 -245589270 + MIR SINE MIR 7 160 -102 2209 106 27 7 chr2 7667313 7667614 -245588969 + AluSg SINE Alu 1 307 -3 363 314 109 46 chr2 7667614 7667650 -245588933 + MIR SINE MIR 160 192 -70 193 279 63 13 chr2 7667878 7667957 -245588626 + L2 LINE L2 2772 2854 -460 221 351 98 44 chr2 7668026 7668251 -245588332 + L2 LINE L2 3004 3240 -32 2270 121 0 0 chr2 7668320 7668625 -245587958 - AluSg SINE Alu -5 305 1 848 145 0 0 chr2 7669136 7669313 -245587270 + AluSg/x SINE Alu 166 310 0 380 336 23 0 chr2 7669313 7669441 -245587142 - L2 LINE L2 -620 2694 2564 1013 159 25 0 chr2 7669466 7669623 -245586960 - AluSg/x SINE Alu -14 298 138 1793 283 114 34 chr2 7669626 7670540 -245586043 - L2 LINE L2 -773 2541 1555 525 121 0 0 chr2 7671102 7671185 -245585398 + (TTTC)n Simple_repeat Simple_repeat 1 83 0 843 114 13 7 chr2 7671202 7671351 -245585232 + (TTCTC)n Simple_repeat Simple_repeat 5 154 0 1357 160 94 22 chr2 7671353 7671628 -245584955 - AluJo SINE Alu -17 295 1 252 143 45 36 chr2 7671810 7671922 -245584661 + (TA)n Simple_repeat Simple_repeat 2 114 0 252 317 108 17 chr2 7671938 7672058 -245584525 - MIR SINE MIR -112 150 20 26 50 0 0 chr2 7672225 7672265 -245584318 + AT_rich Low_complexity Low_complexity 1 40 0 210 273 0 0 chr2 7672682 7672737 -245583846 + (TA)n Simple_repeat Simple_repeat 2 56 0 1944 131 0 4 chr2 7672896 7673171 -245583412 - AluSx SINE Alu -38 274 1 237 65 0 0 chr2 7673738 7673769 -245582814 + (TG)n Simple_repeat Simple_repeat 2 32 0 251 170 0 0 chr2 7673932 7673979 -245582604 + L1ME LINE L1 98 144 -5926 190 158 0 26 chr2 7674304 7674342 -245582241 + MIR SINE MIR 112 148 -60 279 292 94 74 chr2 7675329 7675531 -245581052 - MIR3 SINE MIR -2 206 1 304 277 56 97 chr2 7675926 7676010 -245580573 - MIR SINE MIR -13 249 163 1572 207 53 68 chr2 7676010 7676406 -245580177 - MLT1B LTR MaLR 0 390 1 304 277 56 97 chr2 7676406 7676516 -245580067 - MIR SINE MIR -99 163 63 287 336 88 13 chr2 7677324 7677550 -245579033 + MIR SINE MIR 10 252 -10 1693 178 0 0 chr2 7677592 7677868 -245578715 + AluJo SINE Alu 31 306 -6 252 289 218 13 chr2 7678474 7678630 -245577953 - MIR SINE MIR -72 190 3 354 306 108 35 chr2 7678638 7678870 -245577713 - MIR SINE MIR 0 262 14 2261 135 42 8 chr2 7678870 7679247 -245577336 - MLT1B LTR MaLR 0 390 1 2170 105 3 22 chr2 7680783 7681098 -245575485 + AluSx SINE Alu 1 309 -3 1125 282 61 16 chr2 7682173 7682738 -245573845 + MER20B DNA MER1_type 10 643 -140 815 174 0 36 chr2 7682756 7682894 -245573689 + FLAM_C SINE Alu 1 133 0 329 321 95 54 chr2 7683376 7683744 -245572839 - L1ME LINE L1 -460 5702 5320 232 281 61 79 chr2 7685039 7685153 -245571430 - L2 LINE L2 -31 3282 3171 409 299 44 0 chr2 7685498 7685635 -245570948 - MIR3 SINE MIR -50 158 16 204 40 0 0 chr2 7685745 7685770 -245570813 + (ATTG)n Simple_repeat Simple_repeat 2 26 0 190 269 128 13 chr2 7685880 7685958 -245570625 + L2 LINE L2 3147 3233 -39 821 277 139 30 chr2 7686074 7686543 -245570040 - LTR33A LTR ERVL 0 523 4 243 330 161 0 chr2 7687295 7687513 -245569070 - MIR SINE MIR -1 261 9 2366 86 201 5 chr2 7687739 7688113 -245568470 - LTR7 LTR ERV1 -3 447 1 360 307 97 38 chr2 7688129 7688367 -245568216 - MIR SINE MIR -9 253 2 219 337 142 30 chr2 7689894 7690063 -245566520 - MIR3 SINE MIR -11 197 10 546 157 9 52 chr2 7690503 7690618 -245565965 - MER3 DNA MER1_type -1 208 99 249 108 0 0 chr2 7690618 7690655 -245565928 + (T)n Simple_repeat Simple_repeat 1 37 0 6465 108 15 14 chr2 7690658 7692122 -245564461 - L1PA15 LINE L1 0 6165 4678 616 184 37 0 chr2 7692122 7692231 -245564352 - MER3 DNA MER1_type -96 113 1 216 331 66 54 chr2 7692403 7692569 -245564014 + L2 LINE L2 3098 3265 -7 1660 166 21 21 chr2 7692831 7693114 -245563469 + MER49 LTR ERV1 3 285 -638 1455 219 20 34 chr2 7693144 7693496 -245563087 + MER4D LTR ERV1 549 895 -8 400 181 52 26 chr2 7694159 7694275 -245562308 - LTR48 LTR ERV1 -48 739 621 1482 131 146 33 chr2 7694302 7694636 -245561947 - LTR49 LTR ERV1 -251 344 1 26 30 0 0 chr2 7694647 7694680 -245561903 + AT_rich Low_complexity Low_complexity 1 33 0 417 20 0 0 chr2 7696655 7696705 -245559878 + (TCTA)n Simple_repeat Simple_repeat 1 50 0 804 240 16 87 chr2 7696799 7697041 -245559542 + AluJo SINE Alu 47 271 -41 664 241 48 28 chr2 7697090 7697387 -245559196 - L1M4 LINE L1 -2797 3349 3042 2544 58 0 0 chr2 7697387 7697695 -245558888 - AluY SINE Alu -3 308 1 664 241 48 28 chr2 7697695 7697749 -245558834 - L1M4 LINE L1 -3104 3042 2991 226 307 107 60 chr2 7697856 7698006 -245558577 + MIR SINE MIR 28 184 -78 385 274 109 57 chr2 7698219 7698449 -245558134 - MIR SINE MIR -9 253 12 265 273 75 68 chr2 7699240 7699401 -245557182 + MIR3 SINE MIR 3 164 -44 2191 109 7 0 chr2 7699857 7700150 -245556433 + AluSx SINE Alu 5 299 -13 1831 189 46 38 chr2 7700723 7701094 -245555489 + MLT1A2 LTR MaLR 1 374 0 3451 118 70 62 chr2 7701530 7701845 -245554738 - LTR29 LTR ERV1 0 622 298 2038 110 69 7 chr2 7701845 7702136 -245554447 - AluSq SINE Alu 0 313 5 3451 118 70 62 chr2 7702136 7702437 -245554146 - LTR29 LTR ERV1 -324 298 1 1643 210 52 9 chr2 7702609 7702957 -245553626 + MLT1A1 LTR MaLR 1 363 -2 664 271 66 6 chr2 7703610 7703776 -245552807 - AluJb SINE Alu 0 312 137 252 337 12 0 chr2 7704084 7704170 -245552413 + MIR SINE MIR 30 116 -92 2386 133 10 41 chr2 7704485 7704898 -245551685 + MER57A LTR ERV1 4 403 0 1863 116 0 8 chr2 7706433 7706691 -245549892 + AluSc SINE Alu 44 299 -10 25 65 0 0 chr2 7707116 7707162 -245549421 + AT_rich Low_complexity Low_complexity 1 46 0 585 237 95 25 chr2 7707349 7707570 -245549013 - L1MC4a LINE L1 -5 7803 6111 649 87 22 0 chr2 7707623 7707715 -245548868 - AluSc SINE Alu -7 302 209 228 35 0 0 chr2 7707747 7707776 -245548807 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 305 123 70 0 chr2 7707776 7707833 -245548750 - AluJ/FRAM SINE Alu -16 286 226 2135 82 7 21 chr2 7708200 7708491 -245548092 - AluSg SINE Alu -23 287 1 21 0 0 0 chr2 7708497 7708518 -245548065 + AT_rich Low_complexity Low_complexity 1 21 0 626 294 70 22 chr2 7709005 7709233 -245547350 - MIR SINE MIR -21 241 3 38 0 0 0 chr2 7709351 7709389 -245547194 + AT_rich Low_complexity Low_complexity 1 38 0 5840 32 5 0 chr2 7709389 7710040 -245546543 - L1PA5 LINE L1 -11 6143 5490 189 338 50 12 chr2 7710306 7710386 -245546197 - L2 LINE L2 -222 3050 2968 843 152 0 8 chr2 7710443 7710575 -245546008 - AluJb SINE Alu -181 131 1 2509 117 29 49 chr2 7710693 7711078 -245545505 + MER51B LTR ERV1 1 377 0 1814 153 28 93 chr2 7711292 7711691 -245544892 - THE1C LTR MaLR -2 373 1 306 164 0 0 chr2 7712449 7712504 -245544079 + T-rich Low_complexity Low_complexity 1 55 0 268 316 175 0 chr2 7713264 7713378 -245543205 + MIR3 SINE MIR 56 189 -19 3600 193 64 3 chr2 7713441 7714129 -245542454 - MER44D DNA MER2_type 0 605 4 1811 179 47 6 chr2 7715087 7715451 -245541132 + MLT1B LTR MaLR 1 379 -11 755 184 40 40 chr2 7715669 7715843 -245540740 + MER5B DNA MER1_type 5 178 0 218 32 32 0 chr2 7717547 7717578 -245539005 + (TG)n Simple_repeat Simple_repeat 2 33 0 226 254 0 0 chr2 7717711 7717766 -245538817 + (TA)n Simple_repeat Simple_repeat 1 55 0 2185 102 30 0 chr2 7717918 7718213 -245538370 + AluSx SINE Alu 1 304 -8 245 341 0 24 chr2 7718242 7718368 -245538215 + MIR SINE MIR 2 122 -86 1569 186 0 28 chr2 7718941 7719231 -245537352 + AluJo SINE Alu 1 282 -30 1375 202 4 0 chr2 7719350 7719583 -245537000 + MER46A DNA MER2_type 3 236 0 370 302 119 13 chr2 7719812 7719971 -245536612 - MIR SINE MIR -77 185 10 387 287 16 23 chr2 7721210 7721339 -245535244 - MIR SINE MIR -107 155 28 234 320 24 40 chr2 7721951 7722076 -245534507 + MIR SINE MIR 22 144 -118 245 322 70 35 chr2 7722388 7722503 -245534080 + MIR SINE MIR 62 180 -82 1411 256 77 35 chr2 7723900 7724435 -245532148 - MER77 LTR ERV1 -4 601 45 354 378 18 9 chr2 7724438 7724655 -245531928 + L2 LINE L2 2579 2797 -517 31 0 0 0 chr2 7724717 7724748 -245531835 + AT_rich Low_complexity Low_complexity 1 31 0 277 317 67 8 chr2 7724972 7725092 -245531491 + MIR SINE MIR 2 128 -134 2420 82 0 22 chr2 7725154 7725470 -245531113 - AluSg SINE Alu -1 309 1 260 299 0 0 chr2 7725508 7725575 -245531008 - L2 LINE L2 -48 3265 3199 188 300 17 17 chr2 7726355 7726415 -245530168 + MIR SINE MIR 8 67 -195 1016 171 17 11 chr2 7726811 7726992 -245529591 + AluJo SINE Alu 99 280 -32 257 0 30 0 chr2 7727167 7727200 -245529383 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 315 65 0 0 chr2 7727621 7727667 -245528916 - MADE1 DNA Mariner -34 46 1 204 338 0 0 chr2 7728730 7728798 -245527785 - L2 LINE L2 -216 3056 2989 241 373 127 19 chr2 7730261 7730473 -245526110 - MIR SINE MIR -8 254 20 184 53 53 26 chr2 7730488 7730526 -245526057 + T-rich Low_complexity Low_complexity 2 40 0 1455 164 52 36 chr2 7730603 7730908 -245525675 + THE1C LTR MaLR 66 375 0 183 415 0 0 chr2 7730971 7731024 -245525559 - L2 LINE L2 -99 3173 3121 275 294 53 29 chr2 7731035 7731205 -245525378 - L2 LINE L2 -1 3312 3139 5587 167 30 8 chr2 7732176 7732341 -245524242 - L1MA10 LINE L1 -1 6333 6173 306 50 0 0 chr2 7732341 7732381 -245524202 + (TG)n Simple_repeat Simple_repeat 2 41 0 5587 167 30 8 chr2 7732381 7733223 -245523360 - L1MA10 LINE L1 -161 6173 5304 1852 182 34 16 chr2 7733270 7733655 -245522928 + L1 LINE L1 4867 5258 -888 204 41 61 61 chr2 7733947 7733996 -245522587 + A-rich Low_complexity Low_complexity 1 49 0 354 297 90 49 chr2 7734985 7735251 -245521332 - MLT1I LTR MaLR -35 374 98 332 292 71 42 chr2 7736120 7736288 -245520295 + L2 LINE L2 2587 2759 -555 346 292 28 130 chr2 7736391 7736684 -245519899 + L2 LINE L2 2793 3054 -218 308 295 139 16 chr2 7736818 7736940 -245519643 + L2 LINE L2 3136 3272 0 186 43 0 0 chr2 7737758 7737781 -245518802 + (T)n Simple_repeat Simple_repeat 1 23 0 23 0 0 0 chr2 7738138 7738161 -245518422 + AT_rich Low_complexity Low_complexity 1 23 0 1278 177 83 36 chr2 7738587 7738864 -245517719 - AluJo SINE Alu -19 293 4 1842 166 42 101 chr2 7739080 7739220 -245517363 - MER57A LTR ERV1 0 403 256 2323 117 0 0 chr2 7739220 7739528 -245517055 + AluSx SINE Alu 1 308 -4 264 30 0 0 chr2 7739528 7739561 -245517022 + (GA)n Simple_repeat Simple_repeat 2 34 0 1842 166 42 101 chr2 7739561 7739847 -245516736 - MER57A LTR ERV1 -145 258 1 377 332 47 33 chr2 7740893 7741257 -245515326 + L1ME LINE L1 4104 4472 -1674 22 0 0 0 chr2 7741689 7741711 -245514872 + AT_rich Low_complexity Low_complexity 1 22 0 647 216 78 6 chr2 7741744 7741911 -245514672 + MER3 DNA MER1_type 31 209 0 245 279 124 43 chr2 7742063 7742224 -245514359 + L1ME LINE L1 5555 5728 -393 279 185 21 69 chr2 7742432 7742621 -245513962 + (TTATA)n Simple_repeat Simple_repeat 1 180 0 816 181 0 36 chr2 7743120 7743258 -245513325 - FLAM_C SINE Alu 0 133 1 300 312 89 51 chr2 7743814 7743971 -245512612 - MIR3 SINE MIR -11 197 35 226 122 24 24 chr2 7744352 7744393 -245512190 + MLT1G LTR MaLR 550 590 0 330 311 0 66 chr2 7744631 7744782 -245511801 + MLT-int LTR MaLR 423 578 -793 367 266 131 88 chr2 7745363 7745683 -245510900 + MLT1E-int LTR MaLR 1032 1365 -6 258 244 13 42 chr2 7746050 7746085 -245510498 + MLT1G1 LTR MaLR 463 498 -97 2671 107 27 36 chr2 7746085 7746497 -245510086 + L1PA13 LINE L1 5752 6159 -4 258 244 13 42 chr2 7746497 7746558 -245510025 + MLT1G1 LTR MaLR 498 595 0 587 284 75 8 chr2 7746563 7746802 -245509781 + HAL1 LINE L1 1505 1759 -748 846 171 20 0 chr2 7746802 7746954 -245509629 + LTR49 LTR ERV1 1 155 -440 245 283 30 20 chr2 7747876 7747975 -245508608 - L2 LINE L2 -243 3070 2971 231 335 279 3 chr2 7748166 7748453 -245508130 + L2 LINE L2 2371 2736 -578 329 314 168 55 chr2 7748570 7749316 -245507267 - L2 LINE L2 0 3313 2480 462 255 162 10 chr2 7750047 7750373 -245506210 - L1MEc LINE L1 -1599 4616 4227 293 319 102 35 chr2 7750616 7751243 -245505340 - L1MEc LINE L1 -3138 3077 2409 1456 284 98 34 chr2 7751292 7751845 -245504738 + MLT1E LTR MaLR 6 593 0 301 280 28 42 chr2 7751845 7751988 -245504595 - L1MEc LINE L1 -4051 2345 2205 334 227 129 30 chr2 7752703 7752835 -245503748 - L1MC5 LINE L1 -35 7926 7782 523 240 7 13 chr2 7753410 7753564 -245503019 - L1MB8 LINE L1 -2 6176 6024 379 301 101 50 chr2 7753683 7754015 -245502568 - L1M4 LINE L1 -1712 4434 4120 2308 123 48 28 chr2 7754015 7754372 -245502211 - THE1B LTR MaLR 0 364 1 11887 109 4 5 chr2 7754372 7755954 -245500629 - THE1B-int LTR MaLR 0 1580 1 2326 121 51 28 chr2 7755954 7756310 -245500273 - THE1B LTR MaLR 0 364 1 379 301 101 50 chr2 7756310 7756689 -245499894 - L1M4 LINE L1 -2025 4121 3685 24 0 0 0 chr2 7756980 7757004 -245499579 + AT_rich Low_complexity Low_complexity 1 24 0 276 277 27 45 chr2 7757402 7757514 -245499069 - L1M4 LINE L1 -1907 4239 4130 191 279 82 33 chr2 7757538 7757599 -245498984 - L2 LINE L2 -49 3223 3160 248 320 103 16 chr2 7757650 7757844 -245498739 + L2 LINE L2 3102 3312 -1 473 337 10 10 chr2 7757848 7758047 -245498536 + MER58A DNA MER1_type 4 202 -22 540 85 11 79 chr2 7759127 7759304 -245497279 + (CACAC)n Simple_repeat Simple_repeat 1 165 0 200 136 51 17 chr2 7759307 7759366 -245497217 + (CA)n Simple_repeat Simple_repeat 1 61 0 233 299 21 25 chr2 7759380 7759522 -245497061 + CT-rich Low_complexity Low_complexity 4 236 0 226 113 56 14 chr2 7759941 7760012 -245496571 + (CA)n Simple_repeat Simple_repeat 2 75 0 451 130 67 27 chr2 7760024 7760497 -245496086 + (CA)n Simple_repeat Simple_repeat 1 491 0 221 260 0 0 chr2 7761726 7761776 -245494807 + (TGAA)n Simple_repeat Simple_repeat 1 50 0 2041 129 86 9 chr2 7761849 7762197 -245494386 - THE1C LTR MaLR 0 375 1 23 33 0 0 chr2 7762624 7762654 -245493929 + AT_rich Low_complexity Low_complexity 1 30 0 307 315 31 39 chr2 7763780 7763907 -245492676 - MIR SINE MIR -66 142 17 299 276 35 43 chr2 7764242 7764358 -245492225 - MIR3 SINE MIR -81 127 13 870 282 32 16 chr2 7764526 7764778 -245491805 - MIR SINE MIR -4 258 3 842 174 114 0 chr2 7765787 7765954 -245490629 + MER5A DNA MER1_type 1 186 -3 210 37 0 0 chr2 7766329 7766356 -245490227 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 180 0 0 0 chr2 7766674 7766694 -245489889 + (TTTC)n Simple_repeat Simple_repeat 2 21 0 256 246 60 78 chr2 7766749 7766916 -245489667 - L2 LINE L2 -33 3280 3117 189 250 0 0 chr2 7767116 7767152 -245489431 - L2 LINE L2 -96 3217 3182 190 320 100 0 chr2 7767206 7767306 -245489277 - L2 LINE L2 -168 3104 2995 237 306 0 0 chr2 7767346 7767408 -245489175 + G-rich Low_complexity Low_complexity 1 62 0 371 231 56 37 chr2 7768179 7768287 -245488296 - LTR41 LTR ERVL -6 767 658 282 139 0 0 chr2 7768936 7768979 -245487604 - LTR41 LTR ERVL -730 43 1 28 71 0 0 chr2 7769107 7769163 -245487420 + AT_rich Low_complexity Low_complexity 1 56 0 2160 146 47 16 chr2 7769358 7769722 -245486861 + THE1C LTR MaLR 1 375 0 2437 132 0 0 chr2 7769748 7770105 -245486478 + THE1C-int LTR MaLR 15 371 -1209 602 150 71 7 chr2 7770232 7770372 -245486211 + THE1C-int LTR MaLR 1432 1580 0 2015 145 67 20 chr2 7770372 7770730 -245485853 + THE1C LTR MaLR 1 375 0 750 313 55 19 chr2 7770744 7771051 -245485532 + L2 LINE L2 2996 3313 0 1415 226 92 15 chr2 7771539 7771876 -245484707 + MLT1A1 LTR MaLR 3 365 0 494 89 0 111 chr2 7772683 7772773 -245483810 + MADE1 DNA Mariner 1 80 0 387 0 0 0 chr2 7773224 7773267 -245483316 + (CA)n Simple_repeat Simple_repeat 2 44 0 2275 109 0 10 chr2 7774069 7774381 -245482202 - AluSc SINE Alu 0 309 1 1386 206 104 41 chr2 7775238 7775603 -245480980 - MLT1B LTR MaLR 0 390 3 2250 111 0 0 chr2 7775692 7775989 -245480594 + AluSq SINE Alu 1 297 -16 213 237 114 70 chr2 7776409 7776523 -245480060 + L2 LINE L2 3154 3272 0 385 183 14 0 chr2 7776536 7776607 -245479976 + MLT2B1 LTR ERVL 4 75 -445 921 108 31 0 chr2 7776616 7776745 -245479838 - AluSq/x SINE Alu -179 133 1 1036 226 100 73 chr2 7776747 7777186 -245479397 + MLT2B1 LTR ERVL 70 520 0 198 264 287 0 chr2 7777317 7777404 -245479179 - MER5A DNA MER1_type -1 188 77 3254 224 44 15 chr2 7778478 7779971 -245476612 - L1ME3A LINE L1 -11 6970 5425 1565 160 39 11 chr2 7779994 7780275 -245476308 - L1P LINE L1 -2415 3731 3443 918 239 81 10 chr2 7780265 7780562 -245476021 - L1ME3A LINE L1 -4791 2168 1851 * 2266 305 36 29 chr2 7780820 7781708 -245474875 - L1ME3A LINE L1 -5635 1224 105 310 239 14 113 chr2 7781721 7781863 -245474720 + L1MC4 LINE L1 6604 6731 -1311 592 249 86 79 chr2 7781909 7782167 -245474416 - L1ME LINE L1 -407 5763 5504 27 0 0 0 chr2 7783178 7783205 -245473378 + AT_rich Low_complexity Low_complexity 1 27 0 2370 92 7 0 chr2 7783214 7783517 -245473066 + AluSp SINE Alu 2 306 -7 2175 110 0 43 chr2 7783928 7784255 -245472328 + AluSq SINE Alu 1 313 0 398 271 65 0 chr2 7784290 7784397 -245472186 - MIR SINE MIR -30 232 119 2302 110 0 0 chr2 7784996 7785305 -245471278 - AluSc SINE Alu 0 309 1 251 225 0 124 chr2 7785982 7786071 -245470512 + L2 LINE L2 2985 3062 -210 681 277 50 5 chr2 7786446 7786648 -245469935 - MIR SINE MIR -31 231 21 2279 75 0 39 chr2 7787982 7788288 -245468295 + AluY SINE Alu 1 294 -17 354 23 0 0 chr2 7788294 7788337 -245468246 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 350 363 27 14 chr2 7788714 7788860 -245467723 + MER5A DNA MER1_type 3 150 -39 1865 40 0 5 chr2 7788999 7789223 -245467360 + AluY SINE Alu 2 224 -87 272 300 217 11 chr2 7789525 7789705 -245466878 + MIR SINE MIR 46 262 0 345 304 105 21 chr2 7790554 7790745 -245465838 - MIR SINE MIR -48 214 8 267 329 110 19 chr2 7790760 7790915 -245465668 + MIR3 SINE MIR 19 187 -21 233 288 188 29 chr2 7791221 7791391 -245465192 - MIR SINE MIR -32 230 34 219 238 0 49 chr2 7792383 7792460 -245464123 + GA-rich Low_complexity Low_complexity 1 116 0 435 19 0 0 chr2 7793164 7793216 -245463367 + (TG)n Simple_repeat Simple_repeat 2 53 0 296 331 64 43 chr2 7793361 7793514 -245463069 + MER5A DNA MER1_type 18 171 -7 221 318 91 76 chr2 7793509 7793641 -245462942 - MIR3 SINE MIR -39 169 36 * 524 228 93 25 chr2 7794034 7794196 -245462387 - MER58B DNA MER1_type 0 341 169 1575 162 19 15 chr2 7794683 7794778 -245461805 + AluSx SINE Alu 40 133 -179 234 0 0 0 chr2 7794778 7794804 -245461779 + (TAA)n Simple_repeat Simple_repeat 2 27 0 1575 162 19 15 chr2 7794804 7794973 -245461610 + AluSx SINE Alu 133 305 -7 894 213 55 8 chr2 7794999 7795234 -245461349 - Zaphod DNA AcHobo -78 3953 3708 2138 172 0 18 chr2 7796012 7796355 -245460228 - MER1B DNA MER1_type 0 337 1 343 232 54 98 chr2 7796664 7796798 -245459785 - L1MC4a LINE L1 -322 5848 5719 188 388 16 16 chr2 7797477 7797598 -245458985 - L2 LINE L2 -4 3309 3189 314 292 60 64 chr2 7797657 7797890 -245458693 - L1M4 LINE L1 -3771 2375 2144 1164 228 49 62 chr2 7797921 7798311 -245458272 - MLT2C1 LTR ERVL -2 395 11 767 287 50 41 chr2 7798880 7799298 -245457285 - HAL1b LINE L1 -704 644 223 2111 115 3 3 chr2 7799303 7799608 -245456975 - AluSq SINE Alu -8 305 1 335 303 42 50 chr2 7800868 7801129 -245455454 + MER112 DNA MER1_type 2 260 0 26 50 0 0 chr2 7801322 7801362 -245455221 + AT_rich Low_complexity Low_complexity 1 40 0 265 283 120 0 chr2 7801411 7801503 -245455080 - MIR SINE MIR -85 123 21 3189 104 26 0 chr2 7801739 7802160 -245454423 - MER57B LTR ERV1 -2 432 1 360 247 0 12 chr2 7803347 7803428 -245453155 + L2 LINE L2 3234 3313 0 2896 135 29 0 chr2 7803569 7803983 -245452600 + MSTA LTR MaLR 2 427 -1 1620 107 21 4 chr2 7804120 7804354 -245452229 - AluSq SINE Alu -10 303 66 43 35 0 0 chr2 7804741 7804798 -245451785 + AT_rich Low_complexity Low_complexity 1 57 0 478 282 139 49 chr2 7804870 7805510 -245451073 - L2 LINE L2 -16 3297 2593 324 70 0 0 chr2 7805528 7805571 -245451012 + (CA)n Simple_repeat Simple_repeat 2 44 0 1097 177 65 140 chr2 7806664 7807049 -245449534 - MLT1B LTR MaLR 0 390 35 2558 94 6 17 chr2 7807050 7807410 -245449173 + L1PB1 LINE L1 5796 6151 0 25 0 0 0 chr2 7807894 7807919 -245448664 + AT_rich Low_complexity Low_complexity 1 25 0 269 298 128 0 chr2 7807983 7808077 -245448506 - L2 LINE L2 -2 3270 3165 2043 141 3 10 chr2 7808239 7808551 -245448032 - AluJb SINE Alu -2 310 1 222 333 39 0 chr2 7809019 7809097 -245447486 + L2 LINE L2 2878 2958 -355 239 308 31 0 chr2 7809267 7809332 -245447251 + L2 LINE L2 3246 3312 -1 449 264 71 65 chr2 7809442 7809824 -245446759 + L1 LINE L1 2648 3031 -3115 335 259 75 91 chr2 7809853 7810402 -245446181 + L1 LINE L1 3256 3789 -2357 2130 128 0 0 chr2 7810402 7810698 -245445885 + AluSg SINE Alu 1 296 -14 335 259 75 91 chr2 7810698 7810887 -245445696 + L1 LINE L1 3789 3979 -2167 228 265 59 0 chr2 7812353 7812421 -245444162 + MIR SINE MIR 106 177 -85 213 318 15 0 chr2 7812721 7812787 -245443796 + L2 LINE L2 3201 3267 -5 1571 161 63 100 chr2 7814104 7814483 -245442100 + MLT1A1 LTR MaLR 1 365 0 309 308 83 6 chr2 7815329 7815498 -245441085 - MIR SINE MIR -11 251 70 960 246 107 49 chr2 7815645 7816076 -245440507 - MLT1C LTR MaLR -3 464 9 22 0 0 0 chr2 7816400 7816422 -245440161 + AT_rich Low_complexity Low_complexity 1 22 0 1093 258 77 67 chr2 7818146 7818582 -245438001 - L1ME2 LINE L1 -208 5956 5504 2039 143 0 10 chr2 7818582 7818889 -245437694 + AluSx SINE Alu 1 304 -8 1093 258 77 67 chr2 7818889 7819133 -245437450 - L1ME2 LINE L1 -660 5504 5264 947 345 112 31 chr2 7819136 7820224 -245436359 + L2 LINE L2 2100 3272 0 206 62 31 0 chr2 7820556 7820588 -245435995 + (TTTTTG)n Simple_repeat Simple_repeat 2 34 0 1836 190 11 17 chr2 7822953 7823311 -245433272 + MLT1A2 LTR MaLR 8 363 -11 216 304 88 35 chr2 7823381 7823552 -245433031 + MER5A DNA MER1_type 4 183 -6 530 283 98 50 chr2 7823693 7823990 -245432593 - MER110 LTR ERV1 -14 477 167 483 250 70 0 chr2 7824073 7824229 -245432354 - MER110A LTR ERV1 -298 170 4 1410 169 51 42 chr2 7824669 7825070 -245431513 - MSTB2 LTR MaLR -2 455 1 225 0 0 0 chr2 7825787 7825812 -245430771 + (T)n Simple_repeat Simple_repeat 1 25 0 281 297 110 35 chr2 7826885 7826934 -245429649 - MIR SINE MIR -59 203 159 1436 231 136 62 chr2 7826934 7827391 -245429192 + MLT2B1 LTR ERVL 1 497 -23 216 0 0 0 chr2 7827391 7827415 -245429168 + (TG)n Simple_repeat Simple_repeat 2 25 0 1436 231 136 62 chr2 7827415 7827441 -245429142 + MLT2B1 LTR ERVL 497 520 0 281 297 110 35 chr2 7827441 7827536 -245429047 - MIR SINE MIR -103 159 48 207 0 0 0 chr2 7828646 7828669 -245427914 + (TTTTG)n Simple_repeat Simple_repeat 1 23 0 207 100 0 0 chr2 7829287 7829317 -245427266 + (A)n Simple_repeat Simple_repeat 1 30 0 349 259 123 24 chr2 7829385 7829555 -245427028 + L1ME LINE L1 5416 5602 -562 2276 78 0 0 chr2 7829588 7829903 -245426680 - AluY SINE Alu 0 315 1 275 239 245 15 chr2 7829950 7830307 -245426276 - MLT1J2 LTR MaLR -4 442 1 3347 104 57 62 chr2 7830519 7831049 -245425534 - MER1A DNA MER1_type 0 527 1 1028 126 0 48 chr2 7831284 7831451 -245425132 - L1PA11 LINE L1 -1 6173 6015 3051 54 3 0 chr2 7831452 7831825 -245424758 + L1PA10 LINE L1 5484 5857 -311 717 251 39 11 chr2 7831976 7832155 -245424428 - MER5A DNA MER1_type -2 187 4 1041 229 4 25 chr2 7832203 7832448 -245424135 - MER63B DNA MER1_type -196 240 1 296 130 74 0 chr2 7833067 7833121 -245423462 + MIR SINE MIR 118 175 -87 355 263 95 37 chr2 7834140 7834330 -245422253 - MIR SINE MIR -42 220 20 792 249 9 33 chr2 7834634 7834847 -245421736 + L1ME1 LINE L1 5954 6161 -5 445 304 73 22 chr2 7834928 7835244 -245421339 - LTR33 LTR ERVL 0 521 190 275 309 120 6 chr2 7835453 7835628 -245420955 - LTR33 LTR ERVL -324 197 3 789 346 26 17 chr2 7836008 7836352 -245420231 + L2 LINE L2 2457 2803 -511 744 178 0 22 chr2 7836353 7836488 -245420095 - FLAM_A SINE Alu -5 137 6 615 236 27 0 chr2 7836549 7836727 -245419856 + L2 LINE L2 2828 3022 -291 348 24 0 0 chr2 7836954 7836995 -245419588 + (TG)n Simple_repeat Simple_repeat 2 42 0 796 189 18 6 chr2 7839432 7839596 -245416987 - LTR64 LTR ERVK -392 166 1 427 312 83 46 chr2 7840694 7841149 -245415434 - L1M4 LINE L1 -2875 3271 2800 823 232 32 48 chr2 7841274 7841524 -245415059 - MLT1E1 LTR MaLR -2 652 407 929 231 46 42 chr2 7841578 7841838 -245414745 - MLT1E1 LTR MaLR -389 265 5 350 223 36 45 chr2 7843167 7843500 -245413083 + L1MDa LINE L1 1125 1484 -5108 491 270 83 78 chr2 7843508 7843856 -245412727 + L1MDa LINE L1 1521 1922 -4777 2634 36 7 0 chr2 7843856 7844157 -245412426 + AluY SINE Alu 1 303 -8 491 270 83 78 chr2 7844157 7844377 -245412206 + L1MDa LINE L1 1922 2139 -4560 1856 270 116 41 chr2 7844410 7844741 -245411842 + L1M4 LINE L1 3587 3892 -2254 954 92 13 7 chr2 7844741 7844894 -245411689 + (GAAA)n Simple_repeat Simple_repeat 4 157 0 1856 270 116 41 chr2 7844894 7846060 -245410523 + L1M4 LINE L1 3892 5195 -951 374 328 47 0 chr2 7847112 7847281 -245409302 + MIR SINE MIR 25 200 -62 765 226 140 82 chr2 7847579 7848016 -245408567 + LTR37B LTR ERV1 7 468 0 2629 52 0 0 chr2 7848192 7848497 -245408086 - AluY SINE Alu -6 305 1 413 291 127 0 chr2 7849997 7850162 -245406421 + MIR SINE MIR 67 252 -10 298 285 176 57 chr2 7851821 7851923 -245404660 - L2 LINE L2 -73 3240 3152 2160 110 0 10 chr2 7851923 7852222 -245404361 + AluSg SINE Alu 9 304 -6 298 285 176 57 chr2 7852222 7852488 -245404095 - L2 LINE L2 -161 3152 2828 1045 293 140 55 chr2 7852622 7853002 -245403581 - L2 LINE L2 -710 2604 2258 1203 149 23 28 chr2 7853002 7853216 -245403367 + L1MC1 LINE L1 6121 6333 0 1045 293 140 55 chr2 7853216 7853586 -245402997 - L2 LINE L2 -1056 2258 1790 309 289 114 0 chr2 7853758 7853872 -245402711 - L2 LINE L2 -723 2591 2465 223 291 0 0 chr2 7853873 7853928 -245402655 - L2 LINE L2 -1529 1785 1731 1415 153 0 0 chr2 7853933 7854155 -245402428 + AluJo SINE Alu 91 312 0 290 274 189 11 chr2 7854164 7854339 -245402244 - L2 LINE L2 -1638 1676 1471 234 219 0 0 chr2 7854385 7854449 -245402134 + (TGGA)n Simple_repeat Simple_repeat 3 66 0 230 335 134 12 chr2 7855172 7855336 -245401247 + MIR SINE MIR 54 237 -25 1677 87 55 0 chr2 7855337 7855555 -245401028 - MER30 DNA MER1_type 0 230 1 420 274 126 49 chr2 7855990 7856315 -245400268 + LTR52 LTR ERVL 2 351 -70 180 0 0 0 chr2 7856427 7856447 -245400136 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 193 365 56 9 chr2 7856687 7856794 -245399789 + L2 LINE L2 3167 3278 -35 198 71 0 0 chr2 7856868 7856896 -245399687 + (TG)n Simple_repeat Simple_repeat 1 28 0 261 0 0 0 chr2 7856950 7856979 -245399604 + (CA)n Simple_repeat Simple_repeat 2 30 0 326 286 0 0 chr2 7857145 7857222 -245399361 + MIR SINE MIR 71 147 -115 496 327 112 11 chr2 7857512 7857781 -245398802 + MLT2F LTR ERVL 269 564 -99 597 276 164 15 chr2 7858340 7858670 -245397913 + MLT2F LTR ERVL 24 402 -261 261 0 0 0 chr2 7859712 7859741 -245396842 + (TG)n Simple_repeat Simple_repeat 2 30 0 692 276 107 31 chr2 7860193 7860502 -245396081 + MLT1C LTR MaLR 3 344 -123 263 293 0 27 chr2 7860502 7860577 -245396006 - L2 LINE L2 -36 3277 3205 207 0 0 0 chr2 7860682 7860705 -245395878 + (TA)n Simple_repeat Simple_repeat 1 23 0 3773 49 0 7 chr2 7861727 7862178 -245394405 - LTR7 LTR ERV1 -2 448 1 2676 75 45 0 chr2 7862178 7862553 -245394030 - HERVH LTR ERV1 0 7713 7322 1337 142 18 9 chr2 7862551 7862769 -245393814 - HERVH LTR ERV1 -1894 5819 5600 * 4134 142 31 2 chr2 7862770 7863413 -245393170 - HERVH LTR ERV1 -2564 5149 4488 3136 125 37 6 chr2 7863415 7863902 -245392681 - HERVH LTR ERV1 -3720 3993 3492 977 120 7 0 chr2 7863892 7864042 -245392541 - HERVH LTR ERV1 -4423 3290 3140 * 16955 101 20 19 chr2 7864036 7866582 -245390001 - HERVH LTR ERV1 -4726 2987 437 991 85 42 78 chr2 7866583 7866838 -245389745 - HERVH LTR ERV1 -7093 620 437 4478 89 5 6 chr2 7866839 7867460 -245389123 - HERVH LTR ERV1 -7093 620 1 3663 55 4 11 chr2 7867462 7867913 -245388670 - LTR7 LTR ERV1 -2 448 1 493 296 90 48 chr2 7868056 7868480 -245388103 + LTR16A LTR ERVL 1 442 -8 267 307 59 52 chr2 7868678 7868831 -245387752 + L2 LINE L2 3160 3313 0 231 253 69 35 chr2 7869611 7869698 -245386885 + MER5A DNA MER1_type 97 186 -3 266 248 90 60 chr2 7871432 7871565 -245385018 + L2 LINE L2 3136 3272 0 213 330 98 0 chr2 7872006 7872118 -245384465 + L3b LINE CR1 1121 1243 -340 506 280 78 56 chr2 7872123 7872226 -245384357 - MIR SINE MIR 0 262 163 1704 197 7 102 chr2 7872226 7872657 -245383926 + MLT1B LTR MaLR 1 390 0 506 280 78 56 chr2 7872657 7872785 -245383798 - MIR SINE MIR -99 163 26 2084 143 74 34 chr2 7872840 7873190 -245383393 + THE1B LTR MaLR 1 364 0 294 235 78 86 chr2 7873788 7874031 -245382552 - L1MC4 LINE L1 -878 7164 6924 468 293 8 0 chr2 7874063 7874196 -245382387 - MER58A DNA MER1_type -44 180 47 423 0 0 0 chr2 7874781 7874828 -245381755 + (TG)n Simple_repeat Simple_repeat 2 48 0 371 356 58 5 chr2 7874902 7875093 -245381490 + MIR SINE MIR 21 221 -41 194 289 44 104 chr2 7875217 7875352 -245381231 - MIR SINE MIR -113 149 23 226 261 171 0 chr2 7875933 7876021 -245380562 + L2 LINE L2 3169 3271 -1 488 43 159 0 chr2 7877435 7877504 -245379079 - MADE1 DNA Mariner 0 80 1 536 220 184 54 chr2 7877699 7878011 -245378572 - MLT1J2 LTR MaLR -10 440 44 377 290 48 0 chr2 7879187 7879311 -245377272 + MER94 DNA DNA 5 134 0 22 0 0 0 chr2 7879711 7879733 -245376850 + AT_rich Low_complexity Low_complexity 1 22 0 233 268 87 22 chr2 7879761 7879944 -245376639 - L1M4 LINE L1 -1006 5140 4946 337 315 124 19 chr2 7880024 7880291 -245376292 - L1M4 LINE L1 -1323 4823 4529 1223 277 36 6 chr2 7880293 7880625 -245375958 + L1M4 LINE L1 1 342 -6200 298 175 186 21 chr2 7880617 7880714 -245375869 + L1M4 LINE L1 1745 1857 -4789 * 483 298 71 60 chr2 7881068 7881631 -245374952 - L1M4 LINE L1 -1922 4224 3656 281 214 0 11 chr2 7881806 7881895 -245374688 + (TA)n Simple_repeat Simple_repeat 1 88 0 389 304 56 60 chr2 7882294 7882329 -245374254 - L1MEd LINE L1 -4949 1170 1136 1955 153 0 10 chr2 7882329 7882636 -245373947 - AluSx SINE Alu -8 304 1 389 304 56 60 chr2 7882636 7882866 -245373717 - L1MEd LINE L1 -4983 1136 906 204 273 0 0 chr2 7882907 7882951 -245373632 + (TA)n Simple_repeat Simple_repeat 2 45 0 3560 139 59 13 chr2 7882951 7883227 -245373356 + MER39B LTR ERV1 3 265 -388 2067 134 80 14 chr2 7883227 7883578 -245373005 + THE1C LTR MaLR 1 374 -1 3560 139 59 13 chr2 7883578 7883896 -245372687 + MER39B LTR ERV1 265 624 -29 2178 73 6 94 chr2 7885809 7886137 -245370446 + AluSx SINE Alu 1 299 -13 187 367 46 0 chr2 7886234 7886343 -245370240 - MIR SINE MIR -32 230 117 468 212 22 4 chr2 7886904 7887140 -245369443 + GA-rich Low_complexity Low_complexity 1 240 0 1851 161 33 3 chr2 7887744 7887869 -245368714 + AluSx SINE Alu 2 122 -190 212 0 36 0 chr2 7887869 7887897 -245368686 + (CAAA)n Simple_repeat Simple_repeat 4 32 0 1851 161 33 3 chr2 7887897 7888070 -245368513 + AluSx SINE Alu 122 309 -3 220 213 43 0 chr2 7889006 7889053 -245367530 - MIR SINE MIR -132 130 82 191 283 22 0 chr2 7889538 7889584 -245366999 - MIR3 SINE MIR -16 192 146 1605 248 102 40 chr2 7889996 7891182 -245365401 + L1ME3A LINE L1 4884 6166 -4 204 40 0 0 chr2 7893835 7893860 -245362723 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 250 245 60 73 chr2 7894823 7894988 -245361595 - MIR3 SINE MIR -11 197 36 288 0 0 0 chr2 7895504 7895536 -245361047 + (T)n Simple_repeat Simple_repeat 1 32 0 470 364 65 14 chr2 7895629 7895846 -245360737 - MIR SINE MIR -15 247 20 352 376 129 0 chr2 7896683 7896893 -245359690 + L2 LINE L2 2488 2724 -590 876 305 57 55 chr2 7897062 7897715 -245358868 + L1MC4a LINE L1 5254 5907 -1901 292 149 15 15 chr2 7897723 7897790 -245358793 + (TA)n Simple_repeat Simple_repeat 1 67 0 306 132 0 0 chr2 7897942 7897995 -245358588 + (TG)n Simple_repeat Simple_repeat 2 54 0 264 326 76 5 chr2 7898006 7898190 -245358393 - L2 LINE L2 -1506 1808 1612 2290 116 129 13 chr2 7898472 7898851 -245357732 - MSTA LTR MaLR -5 423 1 260 239 0 0 chr2 7898939 7899006 -245357577 - HERV16 LTR ERVL -83 4913 4847 360 192 27 0 chr2 7899425 7899498 -245357085 - LTR16B LTR ERVL -389 75 1 4840 221 32 7 chr2 7899641 7900655 -245355928 + MER45B DNA AcHobo 1 1040 0 1967 194 22 8 chr2 7901204 7901564 -245355019 - MLT1A1 LTR MaLR 0 365 1 2317 73 0 0 chr2 7902081 7902421 -245354162 + AluY SINE Alu 1 311 0 2214 139 0 0 chr2 7903933 7904243 -245352340 - AluSx SINE Alu -2 310 1 197 206 48 48 chr2 7904634 7904697 -245351886 + L2 LINE L2 3158 3220 -93 277 301 48 19 chr2 7904797 7904900 -245351683 + L2 LINE L2 3155 3260 -12 609 330 33 0 chr2 7905873 7906088 -245350495 + MIR SINE MIR 20 241 -21 181 337 42 60 chr2 7906167 7906333 -245350250 + MIR3 SINE MIR 37 199 -9 215 59 0 29 chr2 7906650 7906684 -245349899 + (GGGAGA)n Simple_repeat Simple_repeat 4 36 0 1912 208 45 75 chr2 7906744 7907301 -245349282 - MLT1F LTR MaLR -2 540 1 290 269 41 69 chr2 7907379 7907524 -245349059 - L2 LINE L2 -853 2461 2321 1379 316 80 47 chr2 7907782 7908266 -245348317 + L2 LINE L2 2209 2676 -637 2216 90 37 7 chr2 7908266 7908566 -245348017 - AluSg SINE Alu -1 309 1 1379 316 80 47 chr2 7908566 7909144 -245347439 + L2 LINE L2 2676 3313 0 245 252 25 109 chr2 7909481 7909600 -245346983 + L2 LINE L2 3190 3298 -15 319 295 38 0 chr2 7909760 7909865 -245346718 + L1P LINE L1 3656 3764 -2382 203 243 0 0 chr2 7909866 7909903 -245346680 + (CA)n Simple_repeat Simple_repeat 2 38 0 225 236 34 22 chr2 7909910 7909999 -245346584 + L1MC4 LINE L1 6616 6705 -1337 * 237 165 94 47 chr2 7909978 7910063 -245346520 - L1MC4 LINE L1 -1340 6702 6614 380 184 23 0 chr2 7910067 7910154 -245346429 + (CATATA)n Simple_repeat Simple_repeat 6 94 0 761 244 27 44 chr2 7910240 7910528 -245346055 + L1M4 LINE L1 4079 4360 -1786 2878 215 108 82 chr2 7910768 7911279 -245345304 + L1MC3 LINE L1 6593 7089 -696 381 243 0 0 chr2 7911279 7911353 -245345230 + MLT1F1 LTR MaLR 50 123 -444 2878 215 108 82 chr2 7911353 7911916 -245344667 + L1MC3 LINE L1 7089 7770 -15 2035 198 8 6 chr2 7911961 7912325 -245344258 - MLT1A1 LTR MaLR 0 365 1 431 322 63 51 chr2 7912338 7912973 -245343610 + L1MB3 LINE L1 3512 4154 -1992 685 207 95 12 chr2 7913001 7913170 -245343413 + MER5A DNA MER1_type 1 183 -6 361 252 92 30 chr2 7913176 7913307 -245343276 + LTR16A1 LTR ERVL 1 139 -318 843 184 13 0 chr2 7913345 7913497 -245343086 + MER2 DNA MER2_type 17 170 -175 * 965 211 48 55 chr2 7913495 7913784 -245342799 + LTR16A1 LTR ERVL 171 457 0 500 295 49 11 chr2 7913874 7914057 -245342526 - MIR SINE MIR -1 261 72 23 68 0 0 chr2 7914133 7914177 -245342406 + AT_rich Low_complexity Low_complexity 1 44 0 344 279 38 100 chr2 7914550 7914890 -245341693 + MLT1I LTR MaLR 91 409 0 996 234 114 32 chr2 7915017 7915333 -245341250 + MER2 DNA MER2_type 2 343 -2 335 291 57 60 chr2 7915346 7915546 -245341037 + L1MB3 LINE L1 5039 5239 -907 216 111 0 0 chr2 7915546 7915582 -245341001 + (CA)n Simple_repeat Simple_repeat 1 36 0 335 291 57 60 chr2 7915582 7915714 -245340869 + L1MB3 LINE L1 5239 5370 -776 557 282 87 17 chr2 7915884 7916179 -245340404 + L1ME4a LINE L1 5613 5883 -238 428 295 77 22 chr2 7917163 7917346 -245339237 - MIR SINE MIR -58 204 12 186 43 0 0 chr2 7917571 7917594 -245338989 + (TG)n Simple_repeat Simple_repeat 1 23 0 1982 104 33 0 chr2 7917857 7918152 -245338431 + AluSg SINE Alu 1 304 0 239 256 35 47 chr2 7920643 7920729 -245335854 + MIR SINE MIR 137 221 -41 2629 132 5 3 chr2 7920826 7921198 -245335385 + THE1C LTR MaLR 1 373 -2 3500 171 53 0 chr2 7921301 7921927 -245334656 + L1MB3 LINE L1 5523 6181 -2 294 293 0 12 chr2 7922778 7922860 -245333723 + MIR SINE MIR 2 82 -180 2868 152 26 4 chr2 7924043 7924498 -245332085 - L1PA15 LINE L1 0 6165 5701 23 0 0 0 chr2 7926164 7926187 -245330396 + AT_rich Low_complexity Low_complexity 1 23 0 1230 89 157 0 chr2 7926818 7926969 -245329614 + MLT2A1 LTR ERVL 224 412 -32 806 30 10 0 chr2 7926969 7927070 -245329513 + (TCTA)n Simple_repeat Simple_repeat 3 104 0 1230 89 157 0 chr2 7927070 7927109 -245329474 + MLT2A1 LTR ERVL 412 444 0 279 0 0 0 chr2 7927581 7927612 -245328971 + (CAT)n Simple_repeat Simple_repeat 3 33 0 813 290 97 37 chr2 7927645 7928100 -245328483 - MLT1L LTR MaLR -46 569 88 475 204 350 19 chr2 7928544 7928657 -245327926 - MER63A DNA MER1_type -1479 209 135 396 0 0 0 chr2 7928657 7928701 -245327882 + (CA)n Simple_repeat Simple_repeat 2 45 0 475 204 350 19 chr2 7928701 7928744 -245327839 - MER63A DNA MER1_type -1553 135 1 217 368 135 11 chr2 7928937 7929122 -245327461 - L2 LINE L2 -235 3037 2830 1583 212 41 13 chr2 7929278 7929811 -245326772 + MER92B LTR ERV1 15 636 0 368 123 0 15 chr2 7930604 7930669 -245325914 + (TTCC)n Simple_repeat Simple_repeat 3 66 0 412 142 115 108 chr2 7931000 7931148 -245325435 + MER53 DNA DNA 1 149 -40 267 31 0 0 chr2 7931504 7931536 -245325047 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 180 152 0 0 chr2 7933730 7933763 -245322820 + GA-rich Low_complexity Low_complexity 1 33 0 513 323 90 32 chr2 7934738 7935082 -245321501 - L2 LINE L2 -44 3269 2906 202 373 19 25 chr2 7936730 7936891 -245319692 + MIR SINE MIR 31 190 -72 294 314 48 40 chr2 7937946 7938070 -245318513 + MIR SINE MIR 20 144 -118 282 325 46 35 chr2 7938624 7938821 -245317762 - L2 LINE L2 -653 2661 2463 968 236 74 0 chr2 7940628 7940870 -245315713 + MIR SINE MIR 1 260 -2 215 266 38 13 chr2 7943475 7943554 -245313029 + MIR SINE MIR 111 191 -71 537 164 116 156 chr2 7945046 7945220 -245311363 + MER20 DNA MER1_type 1 166 -53 285 98 0 0 chr2 7945220 7945261 -245311322 + (CA)n Simple_repeat Simple_repeat 1 41 0 537 164 116 156 chr2 7945261 7945311 -245311272 + MER20 DNA MER1_type 166 216 -3 282 358 5 27 chr2 7945324 7945511 -245311072 + MIR SINE MIR 46 228 -34 203 241 37 0 chr2 7945508 7945562 -245311021 + L2 LINE L2 3211 3266 -6 * 449 205 49 25 chr2 7946341 7946463 -245310120 + L1ME4a LINE L1 5997 6121 0 284 289 31 21 chr2 7946910 7947007 -245309576 + MIR SINE MIR 44 141 -67 2208 114 0 22 chr2 7949518 7949835 -245306748 + AluSg SINE Alu 1 310 0 199 380 53 9 chr2 7950731 7950844 -245305739 + MIR SINE MIR 36 153 -109 21 0 0 0 chr2 7951971 7951992 -245304591 + AT_rich Low_complexity Low_complexity 1 21 0 2201 135 112 0 chr2 7952590 7952975 -245303608 - MSTA LTR MaLR 0 428 1 213 302 0 0 chr2 7953095 7953148 -245303435 - MIR SINE MIR -163 99 47 218 220 9 147 chr2 7954480 7954540 -245302043 + MER5A DNA MER1_type 16 56 -133 2134 133 0 0 chr2 7954540 7954848 -245301735 + AluSx SINE Alu 3 310 -2 218 220 9 147 chr2 7954848 7954896 -245301687 + MER5A DNA MER1_type 56 109 -80 619 185 106 7 chr2 7954903 7955054 -245301529 - MER5B DNA MER1_type -12 166 1 327 265 68 0 chr2 7955208 7955340 -245301243 + MIR SINE MIR 60 200 -62 1594 158 105 31 chr2 7956700 7957023 -245299560 + MER7A DNA MER2_type 2 346 0 501 271 52 35 chr2 7957484 7957713 -245298870 - LTR67 LTR ERVL 0 557 325 280 379 26 13 chr2 7958309 7958462 -245298121 - MIR3 SINE MIR -38 170 16 748 212 67 56 chr2 7960378 7960705 -245295878 - LTR37B LTR ERV1 -7 461 91 22 0 0 0 chr2 7961295 7961317 -245295266 + AT_rich Low_complexity Low_complexity 1 22 0 1893 110 77 44 chr2 7961367 7961730 -245294853 + THE1C LTR MaLR 1 375 0 261 83 0 0 chr2 7963462 7963498 -245293085 + (CA)n Simple_repeat Simple_repeat 1 36 0 198 340 21 11 chr2 7964467 7964561 -245292022 + MIR SINE MIR 60 154 -108 1104 238 79 0 chr2 7966231 7966496 -245290087 - MER58B DNA MER1_type 0 341 56 232 213 13 27 chr2 7966659 7966734 -245289849 + (TGAA)n Simple_repeat Simple_repeat 1 74 0 208 341 145 15 chr2 7968234 7968432 -245288151 + MIR3 SINE MIR 21 241 -21 1201 118 82 282 chr2 7968432 7968967 -245287616 - MSTA LTR MaLR 0 428 1 4172 146 50 21 chr2 7969155 7969918 -245286665 + LTR1 LTR ERV1 1 785 0 247 361 62 0 chr2 7970620 7970750 -245285833 - MIR SINE MIR -105 157 20 3528 176 30 11 chr2 7970751 7971505 -245285078 + L1MA9 LINE L1 4242 5010 -1136 5163 190 18 9 chr2 7971745 7972519 -245284064 + L1MA9 LINE L1 5002 5768 -544 222 37 0 0 chr2 7972519 7972546 -245284037 + (CA)n Simple_repeat Simple_repeat 2 28 0 5163 190 18 9 chr2 7972546 7972809 -245283774 + L1MA9 LINE L1 5768 6027 -285 1480 196 28 39 chr2 7972809 7973145 -245283438 + AluJo SINE Alu 1 333 0 5163 190 18 9 chr2 7973145 7973405 -245283178 + L1MA9 LINE L1 6027 6311 -1 204 325 165 21 chr2 7974001 7974389 -245282194 + L2 LINE L2 2454 2897 -417 254 265 29 0 chr2 7974389 7974457 -245282126 + CT-rich Low_complexity Low_complexity 2 71 0 190 357 56 32 chr2 7974488 7974737 -245281846 + L2 LINE L2 2945 3199 -73 315 294 43 37 chr2 7974927 7975090 -245281493 + MIR SINE MIR 35 198 -64 1673 190 73 38 chr2 7975440 7975819 -245280764 - MLT1C LTR MaLR 0 467 72 1320 219 76 28 chr2 7975819 7976176 -245280407 + MLT1A2 LTR MaLR 1 374 0 1673 190 73 38 chr2 7976176 7976191 -245280392 - MLT1C LTR MaLR -395 72 59 3575 70 4 7 chr2 7976198 7976652 -245279931 + MLT2A2 LTR ERVL 1 453 0 192 296 0 0 chr2 7977717 7977771 -245278812 - L2 LINE L2 0 3272 3219 365 265 11 99 chr2 7977838 7978019 -245278564 + MIR SINE MIR 62 226 -36 290 68 0 23 chr2 7978122 7978166 -245278417 - MADE1 DNA Mariner -37 43 1 198 0 0 0 chr2 7978670 7978692 -245277891 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 232 326 32 0 chr2 7979428 7979523 -245277060 + MIR SINE MIR 43 140 -68 221 281 37 49 chr2 7981640 7981722 -245274861 - L2 LINE L2 0 3272 3192 505 299 23 37 chr2 7982389 7982632 -245273951 + MIR SINE MIR 18 253 -9 1214 254 100 33 chr2 7982887 7983353 -245273230 - MER21B LTR ERV1 -97 834 294 374 212 0 0 chr2 7983426 7983492 -245273091 - MER21B LTR ERV1 -785 78 13 277 284 110 19 chr2 7985775 7985930 -245270653 - MLT1L LTR MaLR -10 605 437 457 314 53 16 chr2 7986305 7986493 -245270090 - MIR SINE MIR -22 240 46 2506 57 3 0 chr2 7986885 7987183 -245269400 + AluY SINE Alu 1 299 -12 180 289 113 10 chr2 7987474 7987571 -245269012 + MIR SINE MIR 106 212 -50 212 316 54 65 chr2 7988279 7988447 -245268136 + MIR3 SINE MIR 16 181 -27 1177 42 0 0 chr2 7988448 7988590 -245267993 + L1PA5 LINE L1 6013 6154 0 318 282 0 0 chr2 7989209 7989351 -245267232 + (CA)n Simple_repeat Simple_repeat 2 143 0 362 282 30 39 chr2 7990213 7990372 -245266211 - MIR SINE MIR -63 145 23 1407 212 43 54 chr2 7990707 7990875 -245265708 + MLT1A2 LTR MaLR 1 169 -205 2156 125 7 0 chr2 7990875 7991179 -245265404 + AluSq SINE Alu 1 306 -7 1407 212 43 54 chr2 7991179 7991382 -245265201 + MLT1A2 LTR MaLR 169 368 -6 275 247 26 39 chr2 7991516 7991593 -245264990 - MER58B DNA MER1_type 0 341 266 190 308 125 27 chr2 7992229 7992424 -245264159 - MIR SINE MIR -6 256 46 213 132 0 0 chr2 7992994 7993032 -245263551 + (CA)n Simple_repeat Simple_repeat 2 39 0 243 300 273 7 chr2 7993913 7994063 -245262520 - MIR SINE MIR -41 221 32 1309 166 12 104 chr2 7994169 7994351 -245262232 - AluJo SINE Alu -2 310 113 243 0 0 0 chr2 7994351 7994378 -245262205 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2692 16 0 0 chr2 7994380 7994686 -245261897 - AluYb8 SINE Alu -12 306 1 1309 166 12 104 chr2 7994686 7994837 -245261746 - AluJo SINE Alu -200 112 5 37 62 0 0 chr2 7995186 7995251 -245261332 + AT_rich Low_complexity Low_complexity 1 65 0 320 230 0 10 chr2 7995552 7995652 -245260931 + CT-rich Low_complexity Low_complexity 2 100 0 1495 217 40 40 chr2 7995905 7996279 -245260304 + MLT1A2 LTR MaLR 1 374 0 696 342 44 44 chr2 7996345 7996781 -245259802 + L2 LINE L2 2836 3271 -1 759 244 72 29 chr2 7996812 7997343 -245259240 - MLT1E1 LTR MaLR -2 652 1 334 353 30 18 chr2 7997428 7997595 -245258988 + MIR SINE MIR 65 233 -29 183 42 0 0 chr2 7997794 7997818 -245258765 + (A)n Simple_repeat Simple_repeat 1 24 0 1052 248 9 0 chr2 7999192 7999414 -245257169 - MLT1A1 LTR MaLR 0 365 142 1230 203 130 20 chr2 8000217 8000562 -245256021 - MLT1B LTR MaLR -4 386 4 333 321 125 22 chr2 8001179 8001403 -245255180 + LTR16A LTR ERVL 115 361 -89 952 330 54 39 chr2 8002291 8002863 -245253720 + HERV16 LTR ERVL 991 1571 -3425 1028 291 44 47 chr2 8003052 8003901 -245252682 + L1M4 LINE L1 2131 2976 -3170 1171 89 0 56 chr2 8003936 8004094 -245252489 - L1PB1 LINE L1 -207 5944 5796 207 0 0 0 chr2 8004094 8004117 -245252466 + (CA)n Simple_repeat Simple_repeat 2 24 0 1171 89 0 56 chr2 8004117 8004137 -245252446 - L1PB1 LINE L1 -355 5796 5776 393 107 47 33 chr2 8004150 8004300 -245252283 + (TA)n Simple_repeat Simple_repeat 1 152 0 253 57 23 68 chr2 8004335 8004423 -245252160 + (TA)n Simple_repeat Simple_repeat 2 85 0 2047 88 35 0 chr2 8004427 8004712 -245251871 - L1PB1 LINE L1 -360 5791 5497 380 349 50 43 chr2 8004785 8005043 -245251540 + L2 LINE L2 3005 3264 -8 412 274 11 86 chr2 8005665 8005840 -245250743 - MIR3 SINE MIR -27 181 20 204 40 0 0 chr2 8006418 8006443 -245250140 + (TGGA)n Simple_repeat Simple_repeat 2 26 0 278 358 50 11 chr2 8007509 8007688 -245248895 + MIR3 SINE MIR 14 199 -9 510 203 0 0 chr2 8008573 8008691 -245247892 + (TG)n Simple_repeat Simple_repeat 1 118 0 548 302 131 34 chr2 8009842 8010110 -245246473 - MER115 DNA AcHobo -398 295 2 228 182 0 0 chr2 8011500 8011544 -245245039 + MIR SINE MIR 84 127 -135 2266 114 76 15 chr2 8011986 8012329 -245244254 + THE1B LTR MaLR 1 364 0 258 95 0 0 chr2 8012750 8012792 -245243791 + (TG)n Simple_repeat Simple_repeat 2 43 0 235 316 68 34 chr2 8013859 8014036 -245242547 - MIR SINE MIR -77 185 3 466 257 56 78 chr2 8016299 8016767 -245239816 + MLT1F1 LTR MaLR 17 537 -5 231 317 39 65 chr2 8018781 8018955 -245237628 + MIR SINE MIR 5 171 -62 184 293 35 0 chr2 8019617 8019675 -245236908 - L2 LINE L2 -18 3254 3195 672 295 78 4 chr2 8020437 8020681 -245235902 - MLT1C LTR MaLR -2 465 204 1398 141 90 31 chr2 8021169 8021274 -245235309 + AluSp SINE Alu 10 107 -206 2145 88 3 26 chr2 8021274 8021579 -245235004 + AluY SINE Alu 1 298 -13 1398 141 90 31 chr2 8021579 8021729 -245234854 + AluSp SINE Alu 107 280 -33 22 0 0 0 chr2 8021749 8021771 -245234812 + AT_rich Low_complexity Low_complexity 1 22 0 410 318 218 45 chr2 8022081 8022594 -245233989 + L1MC4a LINE L1 5255 5856 -1952 557 365 44 6 chr2 8022619 8022940 -245233643 - MLT1J1 LTR MaLR -43 403 71 396 141 125 0 chr2 8023517 8023581 -245233002 - FRAM/FAM SINE Alu -95 71 1 509 225 73 22 chr2 8024045 8024189 -245232394 - MLT1J2 LTR MaLR -289 161 18 200 173 39 58 chr2 8024312 8024364 -245232219 + GA-rich Low_complexity Low_complexity 4 54 0 248 130 22 0 chr2 8024693 8024739 -245231844 + (TTCA)n Simple_repeat Simple_repeat 4 50 0 2411 120 40 0 chr2 8025961 8026310 -245230273 - THE1B LTR MaLR -1 363 1 251 298 28 61 chr2 8026524 8026700 -245229883 + MIR SINE MIR 34 206 -2 33 56 0 0 chr2 8026709 8026763 -245229820 + AT_rich Low_complexity Low_complexity 1 54 0 248 270 50 20 chr2 8026885 8026985 -245229598 + MIR SINE MIR 18 120 -142 226 260 30 80 chr2 8026989 8027089 -245229494 + MIR SINE MIR 89 183 -79 239 294 198 23 chr2 8029465 8029642 -245226941 - L2 LINE L2 -4 3309 3102 3698 30 0 0 chr2 8029814 8030244 -245226339 - L1PA2 LINE L1 0 6155 5726 4184 11 0 0 chr2 8030244 8030745 -245225838 + L1PA2 LINE L1 5221 5721 -434 350 161 23 35 chr2 8030974 8031061 -245225522 + L1MEc LINE L1 2232 2317 -4079 360 282 15 8 chr2 8031132 8031263 -245225320 + L1MCc LINE L1 27 158 -6265 308 294 147 49 chr2 8031364 8031629 -245224954 + L1MCc LINE L1 298 588 -5835 403 195 25 93 chr2 8031755 8031873 -245224710 + L1MCc LINE L1 818 927 -5496 1477 231 46 3 chr2 8032573 8032902 -245223681 + MLT1A1 LTR MaLR 1 343 -22 250 184 41 0 chr2 8032902 8032951 -245223632 + MLT1A1 LTR MaLR 315 365 0 190 292 22 56 chr2 8033500 8033589 -245222994 + MIR3 SINE MIR 89 174 -34 1095 332 125 29 chr2 8033592 8034909 -245221674 + L2 LINE L2 1830 3272 0 335 326 88 21 chr2 8034950 8035143 -245221440 + MIR3 SINE MIR 2 207 -1 1047 166 42 0 chr2 8035575 8035768 -245220815 + MER3 DNA MER1_type 9 209 0 2202 160 35 38 chr2 8036367 8036913 -245219670 + MLT2A2 LTR ERVL 1 551 -3 414 0 0 0 chr2 8036913 8036959 -245219624 + (CA)n Simple_repeat Simple_repeat 2 47 0 249 159 0 0 chr2 8039131 8039175 -245217408 + (TA)n Simple_repeat Simple_repeat 1 44 0 204 135 0 0 chr2 8039174 8039211 -245217372 + (CA)n Simple_repeat Simple_repeat 2 38 0 * 528 253 38 26 chr2 8039216 8039443 -245217140 - L1MD3 LINE L1 -1359 6683 6443 1131 123 0 0 chr2 8039524 8039686 -245216897 + MLT2B2 LTR ERVL 2 163 -352 1962 140 143 11 chr2 8039832 8040210 -245216373 + MSTA LTR MaLR 1 428 0 186 125 143 18 chr2 8040304 8040360 -245216223 + MER5C DNA MER1_type 237 299 -25 27 81 0 0 chr2 8040461 8040523 -245216060 + AT_rich Low_complexity Low_complexity 1 62 0 2791 194 22 2 chr2 8040995 8041505 -245215078 - MLT2B1 LTR ERVL 0 520 1 1560 243 102 49 chr2 8041601 8042189 -245214394 + L1MC4 LINE L1 6468 7086 -956 1081 280 98 22 chr2 8042320 8042727 -245213856 + L1MC4 LINE L1 7464 7901 -141 227 216 0 0 chr2 8042731 8042782 -245213801 + L1MC4 LINE L1 7990 8040 -2 2236 105 6 10 chr2 8044660 8044973 -245211610 + AluSx SINE Alu 1 312 0 4195 195 20 5 chr2 8045112 8046665 -245209918 - L1MA9 LINE L1 -14 6298 4536 287 220 0 0 chr2 8046677 8046736 -245209847 - L1MA9 LINE L1 -2494 3652 3594 1364 248 28 55 chr2 8046902 8047301 -245209282 - MLT1E LTR MaLR 0 593 206 216 111 0 0 chr2 8047330 8047366 -245209217 + (TG)n Simple_repeat Simple_repeat 2 37 0 239 213 0 0 chr2 8047366 8047413 -245209170 - MLT1E LTR MaLR -491 163 117 340 239 0 54 chr2 8047999 8048091 -245208492 + L2 LINE L2 3186 3272 0 235 291 0 0 chr2 8048757 8048812 -245207771 + CT-rich Low_complexity Low_complexity 2 56 0 382 296 113 31 chr2 8048878 8049037 -245207546 + MIR3 SINE MIR 5 176 -32 361 299 54 65 chr2 8049793 8049977 -245206606 - MIR SINE MIR -56 206 25 1569 233 55 17 chr2 8050423 8050843 -245205740 + MER63B DNA MER1_type 1 436 0 2224 273 137 30 chr2 8051590 8052587 -245203996 - HAL1 LINE L1 -7 2500 1397 197 267 0 0 chr2 8052696 8052741 -245203842 + MIR SINE MIR 107 151 -111 369 183 0 0 chr2 8052879 8052950 -245203633 - AluJ/FRAM SINE Alu 0 302 232 2410 308 67 25 chr2 8052970 8053592 -245202991 - HAL1 LINE L1 -1189 1318 724 2363 127 36 28 chr2 8053592 8053953 -245202630 - THE1B LTR MaLR 0 364 1 2410 308 67 25 chr2 8053953 8054593 -245201990 - HAL1 LINE L1 -1783 724 3 1648 200 7 0 chr2 8054845 8055155 -245201428 + AluJo SINE Alu 1 312 0 2219 104 0 20 chr2 8055214 8055513 -245201070 + AluSc SINE Alu 1 293 -16 216 0 0 0 chr2 8055607 8055631 -245200952 + (CAAAAA)n Simple_repeat Simple_repeat 3 26 0 1252 188 31 100 chr2 8056093 8056249 -245200334 + MLT1B LTR MaLR 21 186 -204 1916 133 20 20 chr2 8056249 8056550 -245200033 + AluSg SINE Alu 1 301 -9 1252 188 31 100 chr2 8056550 8056782 -245199801 + MLT1B LTR MaLR 186 382 -8 549 278 80 6 chr2 8057793 8057969 -245198614 + Charlie1 DNA MER1_type 1 189 -2572 2203 93 33 0 chr2 8058031 8058332 -245198251 + AluY SINE Alu 1 311 0 249 98 0 157 chr2 8058332 8058383 -245198200 - U6 snRNA snRNA -1 106 64 473 278 15 0 chr2 8058383 8058516 -245198067 + Charlie1 DNA MER1_type 2626 2760 -1 21 36 0 0 chr2 8059062 8059090 -245197493 + AT_rich Low_complexity Low_complexity 1 28 0 1535 184 0 21 chr2 8059204 8059487 -245197096 - AluJo SINE Alu -33 279 3 21 0 0 0 chr2 8059838 8059859 -245196724 + AT_rich Low_complexity Low_complexity 1 21 0 305 216 53 88 chr2 8060061 8060232 -245196351 + L1ME4a LINE L1 5260 5424 -2384 311 288 194 0 chr2 8060448 8060587 -245195996 + MIR SINE MIR 84 249 -13 342 0 0 0 chr2 8060604 8060642 -245195941 + (TG)n Simple_repeat Simple_repeat 1 38 0 261 0 0 0 chr2 8060641 8060670 -245195913 + (GA)n Simple_repeat Simple_repeat 1 29 0 * 1956 118 0 15 chr2 8060675 8060947 -245195636 - AluSx SINE Alu -44 268 1 228 67 0 0 chr2 8062363 8062393 -245194190 + (T)n Simple_repeat Simple_repeat 1 30 0 694 263 99 65 chr2 8063497 8064052 -245192531 + L1ME4a LINE L1 5524 6097 -24 2203 101 3 10 chr2 8064327 8064625 -245191958 + AluSx SINE Alu 1 296 -16 1741 169 3 3 chr2 8064949 8065239 -245191344 + AluJb SINE Alu 7 296 -16 2503 131 28 17 chr2 8065942 8066302 -245190281 - THE1B LTR MaLR 0 364 1 2576 47 3 31 chr2 8066417 8066735 -245189848 - AluY SINE Alu -2 309 1 626 266 7 26 chr2 8066868 8067022 -245189561 + MER45A DNA AcHobo 3 153 -25 1653 262 43 15 chr2 8068446 8069060 -245187523 - L1MD3 LINE L1 -10 7985 7258 256 50 75 0 chr2 8069067 8069107 -245187476 - L1MA1 LINE L1 0 6302 6260 314 105 88 0 chr2 8069109 8069166 -245187417 + L1MA2 LINE L1 6225 6286 -18 755 284 74 40 chr2 8069195 8069651 -245186932 - L1ME1 LINE L1 -264 5902 5407 364 298 34 58 chr2 8070354 8070562 -245186021 + MIR SINE MIR 59 261 -1 2099 66 7 42 chr2 8070594 8070880 -245185703 + AluSp SINE Alu 1 276 -37 321 339 54 0 chr2 8071066 8071196 -245185387 + L2 LINE L2 3133 3269 -3 199 269 19 0 chr2 8073042 8073094 -245183489 + L2 LINE L2 3242 3294 -19 235 349 42 12 chr2 8073131 8073297 -245183286 - MIR SINE MIR -4 258 88 297 0 0 0 chr2 8073338 8073371 -245183212 + (CA)n Simple_repeat Simple_repeat 2 34 0 2228 114 3 0 chr2 8073450 8073747 -245182836 - AluSx SINE Alu -14 298 1 182 312 101 43 chr2 8073986 8074124 -245182459 - L2 LINE L2 0 3272 3127 3755 160 13 61 chr2 8074257 8074672 -245181911 - L1MA10 LINE L1 -3 6331 5967 1846 177 0 16 chr2 8074672 8074989 -245181594 - AluJb SINE Alu 0 312 1 3755 160 13 61 chr2 8074989 8075329 -245181254 - L1MA10 LINE L1 -367 5967 5612 310 121 30 0 chr2 8075976 8076042 -245180541 + CT-rich Low_complexity Low_complexity 2 69 0 378 42 0 0 chr2 8076044 8076092 -245180491 + (CA)n Simple_repeat Simple_repeat 1 48 0 250 270 176 0 chr2 8079187 8079261 -245177322 + L2 LINE L2 3186 3272 0 254 296 12 0 chr2 8079261 8079342 -245177241 + (TGAA)n Simple_repeat Simple_repeat 2 83 0 624 328 129 13 chr2 8079405 8080009 -245176574 + L2 LINE L2 2141 2814 -500 285 284 119 34 chr2 8080081 8080257 -245176326 + L2 LINE L2 2890 3080 -192 514 106 0 32 chr2 8080928 8080944 -245175639 + (GAAA)n Simple_repeat Simple_repeat 2 17 -75 1132 189 242 4 chr2 8080944 8081188 -245175395 + AluJb SINE Alu 1 302 0 514 106 0 32 chr2 8081188 8081265 -245175318 + (GAAA)n Simple_repeat Simple_repeat 17 92 0 281 328 53 8 chr2 8081547 8081678 -245174905 - MIR3 SINE MIR -61 147 11 2212 105 0 16 chr2 8081860 8082164 -245174419 - AluSx SINE Alu -13 299 1 675 234 34 34 chr2 8082619 8082826 -245173757 + L1ME LINE L1 5516 5719 -402 227 57 29 0 chr2 8083086 8083121 -245173462 + L1ME4a LINE L1 6085 6120 -1 198 304 76 13 chr2 8084178 8084257 -245172326 - MER5A DNA MER1_type -51 138 55 1258 316 113 14 chr2 8084433 8085088 -245171495 + L3 LINE CR1 615 1334 -243 216 328 59 51 chr2 8085135 8085391 -245171192 + L2 LINE L2 2844 3101 -171 215 204 0 0 chr2 8085511 8085555 -245171028 + GA-rich Low_complexity Low_complexity 1 44 0 3816 185 36 30 chr2 8086289 8087132 -245169451 + L1MB7 LINE L1 5337 6184 0 294 301 21 129 chr2 8089012 8089298 -245167285 - L2 LINE L2 -4 3268 3014 381 271 114 43 chr2 8089658 8089939 -245166644 - L1M4 LINE L1 -1771 4375 4075 24 53 0 0 chr2 8090307 8090345 -245166238 + AT_rich Low_complexity Low_complexity 1 38 0 226 416 112 0 chr2 8090351 8090476 -245166107 + L2 LINE L2 3134 3272 0 2795 197 18 9 chr2 8093196 8093745 -245162838 + MER89 LTR ERV1 4 557 -2 245 297 27 0 chr2 8094627 8094701 -245161882 + CT-rich Low_complexity Low_complexity 1 76 0 510 277 15 8 chr2 8095095 8095225 -245161358 + MER94 DNA DNA 3 133 -1 4119 112 30 11 chr2 8096054 8096677 -245159906 + MER41B LTR ERV1 1 635 0 2978 215 88 110 chr2 8097615 8098869 -245157714 + MER69B DNA AcHobo 1 1226 0 687 251 52 11 chr2 8099483 8099674 -245156909 - MLT2B1 LTR ERVL -3 517 319 1796 202 17 17 chr2 8099692 8100053 -245156530 + MLT1A2 LTR MaLR 14 374 0 1283 212 7 15 chr2 8100123 8100392 -245156191 - MLT2B1 LTR ERVL -253 267 1 1640 209 33 22 chr2 8100626 8100994 -245155589 - MLT1A2 LTR MaLR 0 374 3 13669 139 36 46 chr2 8101207 8103515 -245153068 + Tigger1 DNA MER2_type 14 2297 -121 1910 115 70 0 chr2 8103515 8103785 -245152798 + AluSx SINE Alu 9 297 -15 13669 139 36 46 chr2 8103785 8103906 -245152677 + Tigger1 DNA MER2_type 2297 2418 0 196 284 75 0 chr2 8104314 8104381 -245152202 + MIR3 SINE MIR 114 185 -23 186 380 70 6 chr2 8105743 8105914 -245150669 - MIR SINE MIR -80 182 1 2065 92 4 0 chr2 8106196 8106457 -245150126 + AluSq SINE Alu 36 297 -16 194 62 31 0 chr2 8106682 8106714 -245149869 + (CAAAA)n Simple_repeat Simple_repeat 3 35 0 309 174 0 0 chr2 8107867 8107936 -245148647 + (TAGA)n Simple_repeat Simple_repeat 1 69 0 208 298 83 24 chr2 8107955 8108039 -245148544 - MIR SINE MIR -70 192 104 333 322 65 37 chr2 8112111 8112325 -245144258 - MIR SINE MIR -11 251 32 2910 19 0 0 chr2 8112940 8113257 -245143326 - AluYb8 SINE Alu -1 317 1 530 223 30 81 chr2 8113306 8113442 -245143141 - MER112 DNA MER1_type -7 253 128 885 241 39 0 chr2 8113442 8113649 -245142934 + MER20 DNA MER1_type 4 218 -1 530 223 30 81 chr2 8113649 8113709 -245142874 - MER112 DNA MER1_type -132 128 67 228 35 0 0 chr2 8113829 8113858 -245142725 + (CA)n Simple_repeat Simple_repeat 2 30 0 249 213 0 80 chr2 8114194 8114269 -245142314 - MIR SINE MIR -78 184 116 303 244 24 0 chr2 8115492 8115574 -245141009 + L2 LINE L2 3133 3216 -56 209 195 0 0 chr2 8115660 8115701 -245140882 + L2 LINE L2 3265 3305 -8 229 169 28 84 chr2 8115754 8115825 -245140758 + L2 LINE L2 3201 3267 -5 32499 31 4 0 chr2 8116362 8120975 -245135608 + L1PA3 LINE L1 1527 6155 0 472 147 13 0 chr2 8121227 8121302 -245135281 - MER58 DNA MER1_type 0 2420 2345 259 175 18 53 chr2 8121330 8121387 -245135196 - MER58 DNA MER1_type -157 58 4 218 288 0 0 chr2 8121926 8121985 -245134598 + MIR SINE MIR 71 129 -133 21 0 0 0 chr2 8122807 8122828 -245133755 + AT_rich Low_complexity Low_complexity 1 21 0 183 271 35 35 chr2 8122833 8122918 -245133665 - MIR SINE MIR -102 160 76 294 29 0 0 chr2 8123118 8123153 -245133430 + (CA)n Simple_repeat Simple_repeat 2 36 0 22 0 0 0 chr2 8124418 8124440 -245132143 + AT_rich Low_complexity Low_complexity 1 22 0 1673 167 27 27 chr2 8125143 8125443 -245131140 + AluJo SINE Alu 1 300 -12 380 301 92 10 chr2 8125767 8125963 -245130620 + MIR SINE MIR 13 224 -38 449 283 7 0 chr2 8126051 8126196 -245130387 - MER117 DNA MER1_type -47 150 5 410 286 8 0 chr2 8127058 8127177 -245129406 + MIR SINE MIR 114 233 -29 1403 137 24 9 chr2 8127548 8127975 -245128608 + LTR54 LTR ERV1 2 510 0 397 175 19 0 chr2 8127978 8128081 -245128502 + (CA)n Simple_repeat Simple_repeat 2 106 0 662 277 59 4 chr2 8128622 8128860 -245127723 + MIR SINE MIR 3 253 -9 1079 137 0 120 chr2 8128934 8129168 -245127415 + L1MB5 LINE L1 5963 6168 -6 185 196 20 0 chr2 8129171 8129222 -245127361 + GA-rich Low_complexity Low_complexity 1 52 0 214 279 0 15 chr2 8129797 8129865 -245126718 + A-rich Low_complexity Low_complexity 2 68 0 226 205 72 48 chr2 8131585 8131668 -245124915 - L3 LINE CR1 -1 1576 1492 182 332 45 65 chr2 8132182 8132381 -245124202 - L2 LINE L2 -18 3254 3060 2096 128 155 13 chr2 8134379 8134754 -245121829 - MSTA LTR MaLR 0 428 1 22 0 0 0 chr2 8134919 8134941 -245121642 + AT_rich Low_complexity Low_complexity 1 22 0 267 303 0 13 chr2 8135973 8136049 -245120534 - MIR SINE MIR -26 236 162 297 129 32 32 chr2 8136052 8136114 -245120469 - MLT2B1 LTR ERVL 0 520 459 232 271 12 24 chr2 8136114 8136199 -245120384 - L1MC4 LINE L1 -1345 6697 6614 491 270 6 0 chr2 8136200 8136374 -245120209 + (TA)n Simple_repeat Simple_repeat 1 175 0 342 0 0 0 chr2 8136405 8136443 -245120140 + (TG)n Simple_repeat Simple_repeat 2 39 0 233 196 39 0 chr2 8136444 8136495 -245120088 + MLT2B1 LTR ERVL 468 520 0 242 271 59 0 chr2 8136682 8136767 -245119816 - L1MC4 LINE L1 -1339 6703 6614 244 160 40 0 chr2 8136806 8136856 -245119727 + MLT2B1 LTR ERVL 464 515 -5 288 253 0 13 chr2 8136861 8136940 -245119643 + MIR SINE MIR 159 236 -26 2410 150 7 6 chr2 8136983 8137367 -245119216 - MLT2D LTR ERVL -40 480 1 366 327 32 6 chr2 8137367 8137523 -245119060 - MIR SINE MIR -99 163 4 186 236 0 0 chr2 8137817 8137872 -245118711 + (TG)n Simple_repeat Simple_repeat 1 55 0 361 347 40 6 chr2 8138041 8138217 -245118366 + MIR SINE MIR 47 228 -34 1913 147 10 10 chr2 8138354 8138646 -245117937 + AluSx SINE Alu 1 292 -20 2214 218 23 14 chr2 8140067 8140549 -245116034 + L1MB5 LINE L1 5663 6139 -41 2186 86 0 7 chr2 8140549 8140827 -245115756 + AluY SINE Alu 1 276 -35 270 0 0 0 chr2 8140832 8140862 -245115721 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 2214 218 23 14 chr2 8140862 8140902 -245115681 + L1MB5 LINE L1 6142 6180 0 587 270 110 5 chr2 8141204 8141404 -245115179 - Charlie8 DNA MER1_type -2193 224 4 1187 262 52 37 chr2 8141893 8142377 -245114206 - LTR53 LTR ERVL -8 511 21 448 280 54 18 chr2 8142756 8142924 -245113659 - MIR SINE MIR -61 201 28 252 0 0 0 chr2 8143213 8143241 -245113342 + (TA)n Simple_repeat Simple_repeat 2 29 0 284 277 69 10 chr2 8144154 8144255 -245112328 + MIR SINE MIR 112 218 -44 2294 134 22 3 chr2 8144272 8144629 -245111954 + THE1B LTR MaLR 1 364 0 613 265 23 55 chr2 8144675 8144932 -245111651 - MIR SINE MIR 0 262 14 362 247 11 0 chr2 8144988 8145081 -245111502 - MIR SINE MIR -74 188 95 642 224 21 0 chr2 8145158 8145301 -245111282 + MIR SINE MIR 20 165 -97 186 43 0 0 chr2 8145334 8145357 -245111226 + (TAA)n Simple_repeat Simple_repeat 2 24 0 244 222 137 43 chr2 8145410 8145527 -245111056 + MER5A DNA MER1_type 9 136 -53 244 340 21 0 chr2 8146097 8146194 -245110389 - MER5A DNA MER1_type -5 184 86 2150 178 63 25 chr2 8146196 8146459 -245110124 - MLT1C LTR MaLR -1 466 178 348 24 0 0 chr2 8146459 8146500 -245110083 + (TG)n Simple_repeat Simple_repeat 2 42 0 2150 178 63 25 chr2 8146500 8146679 -245109904 - MLT1C LTR MaLR -289 178 7 191 59 0 59 chr2 8147048 8147082 -245109501 + (GAAA)n Simple_repeat Simple_repeat 1 32 0 360 0 0 0 chr2 8150507 8150547 -245106036 + (CA)n Simple_repeat Simple_repeat 1 40 0 2443 53 0 16 chr2 8150576 8150879 -245105704 - AluY SINE Alu -13 298 1 21 0 0 0 chr2 8150937 8150958 -245105625 + AT_rich Low_complexity Low_complexity 1 21 0 1176 137 0 0 chr2 8151976 8152144 -245104439 - AluSg/x SINE Alu -8 304 137 2275 114 3 0 chr2 8152438 8152746 -245103837 - AluSp SINE Alu -4 309 1 425 87 159 0 chr2 8154745 8154814 -245101769 + MADE1 DNA Mariner 1 80 0 862 165 0 0 chr2 8155466 8155599 -245100984 + FLAM_C SINE Alu 6 138 -5 2208 106 3 3 chr2 8156226 8156528 -245100055 - AluSp SINE Alu -11 302 1 350 274 21 17 chr2 8157015 8157214 -245099369 - L1ME4a LINE L1 -188 5933 5698 376 369 122 4 chr2 8157342 8157597 -245098986 - L3 LINE CR1 -864 713 429 206 62 31 0 chr2 8157749 8157781 -245098802 + (GAAAA)n Simple_repeat Simple_repeat 1 33 0 207 265 0 29 chr2 8158634 8158702 -245097881 - MIR SINE MIR 0 262 197 2067 132 35 6 chr2 8158706 8159017 -245097566 - MER2 DNA MER2_type -5 340 21 644 265 24 12 chr2 8159026 8159192 -245097391 - MIR SINE MIR -88 174 7 196 260 73 52 chr2 8159268 8159364 -245097219 - MIR SINE MIR -163 99 2 245 302 137 40 chr2 8160485 8160550 -245096033 - MIR SINE MIR 0 262 205 321 26 0 0 chr2 8160550 8160588 -245095995 + (TG)n Simple_repeat Simple_repeat 2 39 0 245 302 137 40 chr2 8160588 8160729 -245095854 - MIR SINE MIR -57 205 39 229 326 102 17 chr2 8162534 8162670 -245093913 + MIR3 SINE MIR 35 189 -19 364 322 66 61 chr2 8162867 8163324 -245093259 + L1M4 LINE L1 4818 5276 -870 6939 208 69 44 chr2 8163348 8165285 -245091298 + L1MDa LINE L1 311 2295 -4245 302 212 0 212 chr2 8165321 8165457 -245091126 + L1MDa LINE L1 2956 3029 -3511 2529 83 0 0 chr2 8165457 8165770 -245090813 - AluSq SINE Alu 0 313 1 302 212 0 212 chr2 8165770 8165855 -245090728 + L1MDa LINE L1 3029 3130 -3410 265 107 18 36 chr2 8165857 8165913 -245090670 + (GAAA)n Simple_repeat Simple_repeat 3 57 0 1808 289 47 7 chr2 8165926 8166643 -245089940 + L1MDa LINE L1 3134 3879 -2661 711 242 50 0 chr2 8166673 8166834 -245089749 + L1MD1 LINE L1 6055 6223 -19 618 265 52 45 chr2 8167011 8167415 -245089168 + L1MEc LINE L1 801 1207 -5356 1033 164 61 5 chr2 8167427 8167641 -245088942 + AluJb SINE Alu 86 311 -1 262 304 44 0 chr2 8167670 8167805 -245088778 + L1MEc LINE L1 1246 1386 -5177 1596 263 72 63 chr2 8167822 8167952 -245088631 + L1MEc LINE L1 1334 1461 -4921 1507 164 33 18 chr2 8167952 8168227 -245088356 + AluSq SINE Alu 23 301 -12 1596 263 72 63 chr2 8168227 8169340 -245087243 + L1MEc LINE L1 1461 2701 -3681 30611 33 0 1 chr2 8169346 8173725 -245082858 + L1PA4 LINE L1 1777 6152 -3 3827 231 42 35 chr2 8173740 8174992 -245081591 + L1MEc LINE L1 2709 3969 -2413 192 158 0 0 chr2 8175253 8175291 -245081292 + (CA)n Simple_repeat Simple_repeat 1 38 0 21 0 0 0 chr2 8175502 8175523 -245081060 + AT_rich Low_complexity Low_complexity 1 21 0 182 203 108 54 chr2 8175674 8175748 -245080835 + MIR SINE MIR 112 189 -73 2153 74 15 4 chr2 8175781 8176052 -245080531 - AluSc SINE Alu -7 302 29 735 285 45 4 chr2 8176149 8176395 -245080188 + MIR SINE MIR 3 258 -4 409 317 94 6 chr2 8176898 8177078 -245079505 + MIR SINE MIR 53 248 -14 25 0 0 0 chr2 8177531 8177556 -245079027 + AT_rich Low_complexity Low_complexity 1 25 0 1008 72 0 226 chr2 8177653 8177874 -245078709 - Charlie3 DNA MER1_type -8 2702 2532 321 322 72 90 chr2 8177922 8178267 -245078316 - L1MEd LINE L1 -5769 350 12 23 0 0 0 chr2 8178287 8178310 -245078273 + AT_rich Low_complexity Low_complexity 1 23 0 281 233 189 83 chr2 8178524 8178704 -245077879 - MLT1J LTR MaLR -189 322 124 280 271 90 14 chr2 8179267 8179411 -245077172 - HAL1b LINE L1 -511 837 683 298 236 36 0 chr2 8179411 8179521 -245077062 + CT-rich Low_complexity Low_complexity 4 117 0 340 330 52 16 chr2 8179678 8179872 -245076711 - HAL1b LINE L1 -801 547 347 355 223 18 0 chr2 8180398 8180510 -245076073 + (TA)n Simple_repeat Simple_repeat 2 115 0 198 143 0 0 chr2 8182038 8182073 -245074510 + (CA)n Simple_repeat Simple_repeat 2 36 0 207 360 12 0 chr2 8182073 8182159 -245074424 + L3 LINE CR1 1335 1421 -156 948 122 23 0 chr2 8183393 8183565 -245073018 + CT-rich Low_complexity Low_complexity 4 179 0 282 29 0 0 chr2 8183704 8183739 -245072844 + (TG)n Simple_repeat Simple_repeat 1 35 0 182 265 20 0 chr2 8184146 8184195 -245072388 - L2 LINE L2 -1 3312 3263 180 0 0 0 chr2 8184398 8184418 -245072165 + (A)n Simple_repeat Simple_repeat 1 20 0 274 178 68 14 chr2 8184555 8184628 -245071955 + MER116 DNA Mariner 2 78 -2 824 234 10 39 chr2 8186984 8187189 -245069394 + MER58A DNA MER1_type 21 219 -5 249 312 104 40 chr2 8187431 8187633 -245068950 - L3 LINE CR1 -26 1551 1337 304 370 7 22 chr2 8188017 8188152 -245068431 + MIR3 SINE MIR 10 142 -66 224 277 71 36 chr2 8188797 8188909 -245067674 + MER5A DNA MER1_type 10 125 -64 2132 117 176 16 chr2 8188976 8189345 -245067238 - MSTA LTR MaLR 0 428 1 1007 167 0 0 chr2 8189560 8189716 -245066867 + AluSg/x SINE Alu 137 292 -20 312 307 97 40 chr2 8189726 8189954 -245066629 - L2 LINE L2 -924 2390 2150 1953 201 52 0 chr2 8191773 8192177 -245064406 - MLT1C LTR MaLR -9 458 34 189 154 0 0 chr2 8192180 8192219 -245064364 + T-rich Low_complexity Low_complexity 1 39 0 250 336 24 48 chr2 8192259 8192467 -245064116 - L2 LINE L2 -28 3285 3083 435 278 148 61 chr2 8192976 8193206 -245063377 + MIR SINE MIR 5 254 -8 223 323 15 0 chr2 8193285 8193350 -245063233 + L2 LINE L2 3207 3272 0 2725 148 38 68 chr2 8194132 8194318 -245062265 - L1MA4 LINE L1 -8 6292 6102 1890 141 11 7 chr2 8194318 8194602 -245061981 + AluSx SINE Alu 1 285 -27 2725 148 38 68 chr2 8194602 8194615 -245061968 - L1MA4 LINE L1 -198 6102 6090 288 0 0 0 chr2 8194615 8194647 -245061936 + (TA)n Simple_repeat Simple_repeat 1 32 0 2725 148 38 68 chr2 8194647 8195006 -245061577 - L1MA4 LINE L1 -210 6090 5750 328 283 0 92 chr2 8195995 8196147 -245060436 + MIR SINE MIR 117 254 -8 1853 190 61 54 chr2 8196213 8196911 -245059672 + L1ME4a LINE L1 2074 2755 -3785 1047 161 11 0 chr2 8196913 8197087 -245059496 + AluSg/x SINE Alu 137 312 0 6933 231 91 47 chr2 8197087 8200265 -245056318 + L1ME4a LINE L1 2746 6066 -687 537 95 24 0 chr2 8200273 8200357 -245056226 + L1MD2 LINE L1 6272 6357 -2 222 272 27 95 chr2 8200400 8200547 -245056036 + L2 LINE L2 3168 3304 -9 426 313 97 14 chr2 8200834 8201051 -245055532 - MIR SINE MIR 0 262 28 1780 188 0 0 chr2 8201170 8201483 -245055100 - AluJb SINE Alu 0 313 1 2111 115 26 10 chr2 8201897 8202201 -245054382 + AluSq SINE Alu 1 309 -4 450 287 8 0 chr2 8204604 8204726 -245051857 + MER94 DNA DNA 7 129 -5 320 260 7 55 chr2 8205962 8206108 -245050475 + L1ME4a LINE L1 6362 6500 -15 843 159 0 0 chr2 8207439 8207571 -245049012 + FLAM_C SINE Alu 2 133 0 225 231 51 51 chr2 8207866 8207944 -245048639 + MIR SINE MIR 111 188 -74 33 66 0 0 chr2 8208058 8208119 -245048464 + AT_rich Low_complexity Low_complexity 1 61 0 195 129 0 0 chr2 8208551 8208582 -245048001 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 183 184 20 20 chr2 8208838 8208887 -245047696 + MIR SINE MIR 25 73 -135 1302 171 80 47 chr2 8209910 8210209 -245046374 + AluJo SINE Alu 4 312 0 1320 219 67 31 chr2 8211476 8211836 -245044747 - MLT1B LTR MaLR -2 388 14 189 242 0 15 chr2 8212383 8212449 -245044134 - L2 LINE L2 -3 3269 3205 314 245 0 57 chr2 8212917 8213047 -245043536 + MIR SINE MIR 85 205 -57 280 284 159 28 chr2 8213149 8213325 -245043258 + MIR SINE MIR 21 219 -43 1931 173 80 30 chr2 8213737 8214151 -245042432 - MLT2D LTR ERVL 0 534 1 334 278 31 0 chr2 8214151 8214248 -245042335 + L2 LINE L2 3172 3271 -1 227 313 117 0 chr2 8214921 8215049 -245041534 - MIR3 SINE MIR -24 184 42 2946 198 37 7 chr2 8216569 8217184 -245039399 - MER99 DNA DNA -3 825 192 38 22 0 0 chr2 8217818 8217863 -245038720 + AT_rich Low_complexity Low_complexity 1 45 0 482 272 0 0 chr2 8217863 8217966 -245038617 - MER99 DNA DNA -724 104 2 353 283 126 31 chr2 8218508 8218731 -245037852 - LTR16A LTR ERVL -1 449 206 1603 181 54 7 chr2 8218890 8219188 -245037395 - AluJo SINE Alu 0 312 1 1223 248 97 16 chr2 8220550 8221103 -245035480 + L1MEc LINE L1 2202 2770 -3445 743 343 65 14 chr2 8221103 8221669 -245034914 - L1MEc LINE L1 -5754 642 48 560 269 22 0 chr2 8221954 8222088 -245034495 + MLT1J1 LTR MaLR 2 138 -308 2394 103 0 0 chr2 8222410 8222712 -245033871 - AluSx SINE Alu -10 302 1 283 286 60 0 chr2 8223118 8223202 -245033381 + LTR50 LTR ERVL 1 89 -706 1708 188 3 13 chr2 8224730 8225044 -245031539 + AluJb SINE Alu 1 311 -1 2277 163 143 13 chr2 8225672 8226191 -245030392 + LTR49 LTR ERV1 1 653 0 2028 246 51 22 chr2 8226711 8227256 -245029327 - MER119 DNA MER1_type -5 578 18 296 278 122 0 chr2 8227315 8227430 -245029153 + MIR SINE MIR 43 171 -37 271 296 44 37 chr2 8227550 8227685 -245028898 - MER5A DNA MER1_type -36 153 18 394 290 82 30 chr2 8229106 8229259 -245027324 - MIR SINE MIR -13 249 79 1967 132 31 0 chr2 8229259 8229546 -245027037 - AluY SINE Alu -15 296 1 394 290 82 30 chr2 8229546 8229623 -245026960 - MIR SINE MIR -183 79 7 1863 149 3 10 chr2 8229652 8229940 -245026643 + AluSx SINE Alu 1 286 -26 1128 184 130 27 chr2 8232221 8232520 -245024063 + MLT1C LTR MaLR 1 330 -137 687 241 0 14 chr2 8232691 8232832 -245023751 + MLT1C LTR MaLR 329 467 0 188 234 0 0 chr2 8234172 8234219 -245022364 - L2 LINE L2 -5 3308 3262 305 221 207 21 chr2 8234508 8234653 -245021930 + MIR SINE MIR 76 247 -15 2563 98 16 19 chr2 8235166 8235542 -245021041 + THE1C LTR MaLR 1 375 0 209 293 73 16 chr2 8237478 8237601 -245018982 + L2 LINE L2 3184 3313 0 23 54 0 0 chr2 8238711 8238748 -245017835 + AT_rich Low_complexity Low_complexity 1 37 0 203 388 0 0 chr2 8239162 8239242 -245017341 + L2 LINE L2 3190 3269 -3 2048 134 30 35 chr2 8239312 8239678 -245016905 + THE1B LTR MaLR 1 364 0 237 291 27 18 chr2 8240714 8240824 -245015759 - MER87 LTR ERV1 -32 509 399 530 294 93 4 chr2 8241557 8241826 -245014757 - L1MCb LINE L1 -5163 882 590 26 0 0 0 chr2 8241960 8241986 -245014597 + AT_rich Low_complexity Low_complexity 1 26 0 245 323 36 30 chr2 8242170 8242337 -245014246 + MER5B DNA MER1_type 7 174 -4 1319 229 15 76 chr2 8242526 8242932 -245013651 - MLT1B LTR MaLR -9 381 1 5326 98 35 4 chr2 8243085 8243836 -245012747 + MER4E LTR ERV1 1 774 -5 2126 114 4 0 chr2 8244835 8245138 -245011445 - AluSx SINE Alu 0 304 1 2164 108 10 25 chr2 8245752 8246066 -245010517 + AluSp SINE Alu 1 309 -4 264 317 12 0 chr2 8247716 8247798 -245008785 - MIR SINE MIR -107 155 73 663 153 0 0 chr2 8247908 8248039 -245008544 + (TAG)n Simple_repeat Simple_repeat 2 132 0 427 206 125 22 chr2 8248040 8248176 -245008407 - MIR SINE MIR -1 261 112 21 0 0 0 chr2 8249817 8249838 -245006745 + AT_rich Low_complexity Low_complexity 1 21 0 2106 96 4 0 chr2 8251395 8251709 -245004874 + AluSx SINE Alu 1 315 0 456 311 38 16 chr2 8252101 8252284 -245004299 + MIR SINE MIR 8 194 -68 213 94 0 0 chr2 8252782 8252814 -245003769 + (TCC)n Simple_repeat Simple_repeat 2 33 0 214 308 77 10 chr2 8253080 8253184 -245003399 - MIR SINE MIR -50 212 102 187 216 0 78 chr2 8253860 8253911 -245002672 - L2 LINE L2 -6 3307 3261 598 219 139 0 chr2 8256545 8256696 -244999887 + MIR SINE MIR 47 218 -44 1337 225 8 0 chr2 8258269 8258518 -244998065 + MLT1C LTR MaLR 207 457 -10 274 227 13 27 chr2 8258576 8258651 -244997932 + Charlie7 DNA MER1_type 29 102 -2510 23 68 0 0 chr2 8258755 8258799 -244997784 + AT_rich Low_complexity Low_complexity 1 44 0 2012 137 0 0 chr2 8258881 8259181 -244997402 + AluSq SINE Alu 11 310 -3 479 309 124 18 chr2 8259918 8260135 -244996448 + MIR SINE MIR 12 251 -11 2174 282 129 18 chr2 8261048 8261921 -244994662 + L2 LINE L2 1576 2545 -769 15569 123 27 5 chr2 8261991 8264351 -244992232 - Tigger1 DNA MER2_type -6 2412 1 304 240 62 121 chr2 8264486 8264941 -244991642 - L1MCc LINE L1 -4892 1531 1300 2396 97 77 3 chr2 8265072 8265411 -244991172 + THE1B LTR MaLR 1 364 0 294 333 140 0 chr2 8265748 8265862 -244990721 + MIR SINE MIR 97 226 -36 418 326 80 29 chr2 8267641 8267816 -244988767 - MIR3 SINE MIR -5 203 20 204 221 143 52 chr2 8268117 8268271 -244988312 - MIR3 SINE MIR -34 174 7 351 304 52 26 chr2 8268299 8268414 -244988169 - L2 LINE L2 -4 3309 3192 519 261 56 6 chr2 8268877 8269038 -244987545 - MER5B DNA MER1_type -8 170 2 2113 98 44 3 chr2 8269141 8269438 -244987145 + AluSq SINE Alu 1 309 -4 1028 119 68 6 chr2 8269499 8269676 -244986907 + MER53 DNA DNA 2 189 0 2017 140 7 0 chr2 8269870 8270178 -244986405 - AluSx SINE Alu -2 310 1 240 210 84 119 chr2 8270255 8270398 -244986185 - MIR SINE MIR -40 222 85 1205 199 66 6 chr2 8271282 8271720 -244984863 - MLT2B1 LTR ERVL 0 515 1 205 238 0 0 chr2 8271966 8272008 -244984575 + (CACG)n Simple_repeat Simple_repeat 4 45 0 2118 101 20 7 chr2 8272469 8272766 -244983817 - AluSx SINE Alu -11 301 1 245 360 141 27 chr2 8273089 8273500 -244983083 + L2 LINE L2 2851 3308 -5 279 0 0 0 chr2 8273860 8273891 -244982692 + (CACAA)n Simple_repeat Simple_repeat 4 34 0 2310 84 3 3 chr2 8274510 8274818 -244981765 - AluSp SINE Alu -5 308 1 295 268 14 0 chr2 8274818 8274889 -244981694 - MER5A DNA MER1_type -112 77 6 533 278 36 29 chr2 8277794 8278071 -244978512 + L1ME3A LINE L1 3803 4081 -2065 1970 153 38 46 chr2 8278073 8278440 -244978143 - THE1B LTR MaLR 0 364 1 364 327 36 0 chr2 8278483 8278593 -244977990 + MIR SINE MIR 16 129 -133 1699 182 90 54 chr2 8278599 8279043 -244977540 + MER31B LTR ERV1 7 466 0 511 260 0 0 chr2 8279050 8279177 -244977406 + MIR SINE MIR 136 262 0 21 0 0 0 chr2 8279255 8279276 -244977307 + AT_rich Low_complexity Low_complexity 1 21 0 1951 111 18 0 chr2 8279321 8279624 -244976959 + AluSp SINE Alu 1 308 0 328 293 79 0 chr2 8279705 8279920 -244976663 + L1ME3A LINE L1 4388 4619 -1527 237 233 58 39 chr2 8279970 8280073 -244976510 + L1ME3A LINE L1 4733 4837 -1309 357 281 80 76 chr2 8280104 8280328 -244976255 - MIR SINE MIR -4 258 34 233 179 0 0 chr2 8280631 8280670 -244975913 + L1ME3A LINE L1 5670 5708 -413 335 299 103 8 chr2 8280683 8280800 -244975783 + L1ME3A LINE L1 5743 5870 -300 1912 156 0 0 chr2 8281101 8281408 -244975175 + AluSx SINE Alu 1 307 -5 1212 302 160 43 chr2 8281417 8281967 -244974616 - L2 LINE L2 -633 2681 2197 2149 182 31 43 chr2 8281967 8282478 -244974105 + MLT1D LTR MaLR 1 505 0 1212 302 160 43 chr2 8282478 8282903 -244973680 - L2 LINE L2 -1117 2197 1592 432 336 32 19 chr2 8282987 8283231 -244973352 - LTR16A LTR ERVL -184 266 17 180 111 0 0 chr2 8283482 8283509 -244973074 + (GGGAA)n Simple_repeat Simple_repeat 2 28 0 194 348 29 0 chr2 8283568 8283637 -244972946 + MIR SINE MIR 64 134 -128 198 0 0 0 chr2 8284382 8284404 -244972179 + (TC)n Simple_repeat Simple_repeat 1 22 0 252 200 42 83 chr2 8285077 8285197 -244971386 + L1M4 LINE L1 2302 2416 -3730 195 42 0 0 chr2 8285230 8285254 -244971329 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 710 296 73 52 chr2 8285397 8285408 -244971175 - LTR16A LTR ERVL -59 398 389 2360 120 3 55 chr2 8285408 8285792 -244970791 + THE1B LTR MaLR 1 364 0 710 296 73 52 chr2 8285792 8286146 -244970437 - LTR16A LTR ERVL -68 389 16 654 352 43 26 chr2 8286294 8286876 -244969707 - HERV16 LTR ERVL -381 5383 4792 990 317 85 38 chr2 8286994 8287831 -244968752 - HERV16 LTR ERVL -879 4606 3718 1108 350 72 3 chr2 8288334 8288865 -244967718 - HERV16 LTR ERVL -1905 3091 2617 1167 291 81 31 chr2 8289068 8289932 -244966651 - HERV16 LTR ERVL -2381 2615 1715 1170 307 124 22 chr2 8289982 8290782 -244965801 - HERV16 LTR ERVL -3420 1576 818 753 77 19 0 chr2 8290814 8290918 -244965665 - AluY SINE Alu -9 302 197 284 315 63 9 chr2 8290942 8291053 -244965530 - HERV16 LTR ERVL -4347 649 533 278 277 0 0 chr2 8291121 8291186 -244965397 - HERV16 LTR ERVL -4570 426 362 768 264 30 26 chr2 8291380 8291611 -244964972 - LTR16A LTR ERVL -13 437 206 186 43 0 0 chr2 8291979 8292002 -244964581 + (TTG)n Simple_repeat Simple_repeat 2 24 0 763 162 0 0 chr2 8292011 8292128 -244964455 - FLAM_C SINE Alu -16 117 1 487 172 11 11 chr2 8292213 8292306 -244964277 - AluJ/FLAM SINE Alu -218 94 2 240 185 77 0 chr2 8292873 8292938 -244963645 + L2 LINE L2 3168 3237 -35 583 272 30 18 chr2 8293759 8293928 -244962655 + MIR SINE MIR 53 223 -39 232 355 53 20 chr2 8294109 8294261 -244962322 + MIR3 SINE MIR 51 207 -1 309 377 8 8 chr2 8295021 8295143 -244961440 + MIR3 SINE MIR 69 190 -18 1691 84 44 0 chr2 8296507 8296732 -244959851 + AluSq SINE Alu 1 235 -78 267 374 70 12 chr2 8296746 8296917 -244959666 + MIR3 SINE MIR 16 196 -12 284 336 114 14 chr2 8297740 8297880 -244958703 + L2 LINE L2 3118 3271 -1 222 222 206 0 chr2 8297922 8297985 -244958598 - L2 LINE L2 0 3272 3197 1130 212 35 12 chr2 8298653 8298908 -244957675 + MIR SINE MIR 1 261 -1 21 0 0 0 chr2 8298916 8298937 -244957646 + AT_rich Low_complexity Low_complexity 1 21 0 212 287 38 57 chr2 8299210 8299367 -244957216 + MIR3 SINE MIR 6 159 -49 1617 197 49 42 chr2 8300568 8300954 -244955629 + MER63B DNA MER1_type 43 431 -5 226 310 39 105 chr2 8300954 8301183 -244955400 + L2 LINE L2 2545 2758 -556 217 374 23 30 chr2 8301288 8301419 -244955164 + L2 LINE L2 2955 3084 -188 294 369 47 30 chr2 8301486 8301719 -244954864 + MIR SINE MIR 5 241 -21 380 326 10 18 chr2 8302087 8302216 -244954367 - MIR SINE MIR -69 139 10 186 231 31 46 chr2 8302388 8302453 -244954130 - L3 LINE CR1 -717 860 797 210 154 0 0 chr2 8302749 8302788 -244953795 + T-rich Low_complexity Low_complexity 3 41 0 2075 125 0 0 chr2 8303324 8303620 -244952963 - AluSx SINE Alu -16 296 1 575 224 33 26 chr2 8303642 8303794 -244952789 - MIR SINE MIR 0 262 110 280 23 23 0 chr2 8304526 8304570 -244952013 - L1MA3 LINE L1 0 6305 6261 1081 242 148 24 chr2 8304702 8305041 -244951542 + MLT1F LTR MaLR 133 513 -29 26 50 0 0 chr2 8305196 8305236 -244951347 + AT_rich Low_complexity Low_complexity 1 40 0 779 229 48 19 chr2 8305270 8305480 -244951103 + AluJo SINE Alu 5 220 -92 316 281 48 82 chr2 8305551 8305711 -244950872 + MER46C DNA MER2_type 7 156 -182 1821 104 4 0 chr2 8305711 8305960 -244950623 + AluSp SINE Alu 2 251 -62 316 281 48 82 chr2 8305960 8306069 -244950514 + MER46C DNA MER2_type 156 267 -71 1360 123 21 8 chr2 8306094 8306329 -244950254 + AluY SINE Alu 5 242 -69 313 221 83 50 chr2 8306521 8306700 -244949883 + L1M2 LINE L1 2725 3897 -2951 342 260 0 39 chr2 8306832 8306936 -244949647 - MIR SINE MIR -57 151 52 596 271 51 38 chr2 8306989 8307193 -244949390 + MIR SINE MIR 3 209 -53 2080 118 0 29 chr2 8307886 8308200 -244948383 + AluSx SINE Alu 1 305 -7 2037 112 3 13 chr2 8308213 8308517 -244948066 + AluSq SINE Alu 1 301 -12 1431 140 8 8 chr2 8308588 8308824 -244947759 + AluSq SINE Alu 1 236 -77 452 314 107 0 chr2 8309056 8309225 -244947358 + L1MC/D LINE L1 5525 5711 -2097 939 219 29 0 chr2 8309309 8309519 -244947064 + AluJo SINE Alu 81 296 -16 1764 140 25 0 chr2 8309675 8309953 -244946630 + AluSx SINE Alu 1 285 -27 268 24 24 24 chr2 8309960 8310002 -244946581 + (TAAAA)n Simple_repeat Simple_repeat 4 45 0 300 289 7 94 chr2 8310301 8310450 -244946133 + MIR3 SINE MIR 59 194 -14 2227 98 0 0 chr2 8310726 8311022 -244945561 + AluY SINE Alu 1 296 -15 1077 187 52 38 chr2 8311123 8311390 -244945193 + AluJo SINE Alu 1 271 -41 268 284 0 11 chr2 8311749 8311837 -244944746 + CT-rich Low_complexity Low_complexity 3 89 0 1743 166 0 16 chr2 8312157 8312464 -244944119 - AluSx SINE Alu -6 306 5 1797 169 3 10 chr2 8312570 8312884 -244943699 - AluJb SINE Alu 0 312 1 219 284 20 59 chr2 8312904 8313006 -244943577 + L2 LINE L2 3139 3236 -36 372 43 0 0 chr2 8313008 8313054 -244943529 + (TGAA)n Simple_repeat Simple_repeat 2 47 0 212 278 89 36 chr2 8313093 8313258 -244943325 + MIR SINE MIR 6 181 -27 735 225 69 32 chr2 8313526 8313628 -244942955 - L1MB5 LINE L1 0 6174 6077 1595 166 0 34 chr2 8313628 8313924 -244942659 - AluJo SINE Alu -26 286 1 735 225 69 32 chr2 8313924 8314039 -244942544 - L1MB5 LINE L1 -97 6077 5949 1847 141 0 26 chr2 8314258 8314563 -244942020 - AluSx SINE Alu -15 297 1 276 100 0 0 chr2 8314625 8314665 -244941918 + (TC)n Simple_repeat Simple_repeat 1 40 0 1704 103 0 9 chr2 8314954 8315186 -244941397 + MER30 DNA MER1_type 1 230 0 235 331 78 24 chr2 8315198 8315364 -244941219 - MIR SINE MIR -71 191 17 1683 147 29 4 chr2 8315512 8315791 -244940792 - AluJo SINE Alu -18 294 9 319 212 91 0 chr2 8315801 8315867 -244940716 - L1MC5 LINE L1 -438 7523 7452 2273 104 0 0 chr2 8315876 8316185 -244940398 + AluSx SINE Alu 1 309 -3 1489 157 0 4 chr2 8316285 8316527 -244940056 + AluJb SINE Alu 59 299 -13 301 223 39 77 chr2 8317296 8317426 -244939157 - L1MC5 LINE L1 -836 7125 7001 2022 130 3 0 chr2 8317427 8317726 -244938857 + AluSx SINE Alu 1 300 -12 263 113 9 209 chr2 8317943 8318045 -244938538 - L1ME1 LINE L1 -2 6176 6089 465 105 17 244 chr2 8318055 8318131 -244938452 - L1MA5A LINE L1 0 6297 6280 1659 172 3 0 chr2 8318131 8318416 -244938167 - AluJo SINE Alu -26 286 1 465 105 17 244 chr2 8318416 8318511 -244938072 - L1MA5A LINE L1 -17 6280 6165 659 127 9 0 chr2 8318535 8318645 -244937938 - L1MA5A LINE L1 -116 6181 6071 473 189 35 154 chr2 8318646 8318798 -244937785 - L1ME1 LINE L1 -59 6107 5983 2064 127 0 3 chr2 8318798 8319098 -244937485 - AluSx SINE Alu -13 299 1 473 189 35 154 chr2 8319098 8319146 -244937437 - L1ME1 LINE L1 -183 5983 5931 1241 183 61 0 chr2 8319158 8319437 -244937146 - AluSx SINE Alu -6 296 1 373 360 34 6 chr2 8320239 8320414 -244936169 + MIR SINE MIR 16 195 -67 3071 70 19 2 chr2 8320423 8320837 -244935746 + L1PA10 LINE L1 5743 6163 -5 24 0 0 0 chr2 8320913 8320937 -244935646 + AT_rich Low_complexity Low_complexity 1 24 0 205 350 17 50 chr2 8321977 8322097 -244934486 + L2 LINE L2 3157 3272 0 612 167 79 0 chr2 8322163 8322277 -244934306 - Charlie1 DNA MER1_type -1 2760 2638 201 342 95 37 chr2 8322536 8322726 -244933857 - MIR SINE MIR -39 223 23 305 278 103 0 chr2 8322996 8323093 -244933490 + L2 LINE L2 3158 3264 -8 202 150 25 0 chr2 8323104 8323144 -244933439 + (TA)n Simple_repeat Simple_repeat 2 42 0 22 35 0 0 chr2 8323152 8323181 -244933402 + AT_rich Low_complexity Low_complexity 1 29 0 292 244 154 41 chr2 8324182 8324305 -244932278 - L2 LINE L2 -1 3312 3176 271 373 54 54 chr2 8324394 8324673 -244931910 - L2 LINE L2 -340 2974 2696 22 35 0 0 chr2 8325552 8325581 -244931002 + AT_rich Low_complexity Low_complexity 1 29 0 183 298 0 18 chr2 8326096 8326153 -244930430 - MIR SINE MIR -126 136 81 1267 265 84 62 chr2 8326347 8326485 -244930098 + MLT1H1 LTR MaLR 2 135 -420 736 209 62 0 chr2 8326485 8326662 -244929921 - MER53 DNA DNA -1 188 1 1267 265 84 62 chr2 8326662 8327009 -244929574 + MLT1H1 LTR MaLR 135 498 -57 1802 135 14 0 chr2 8327009 8327290 -244929293 + AluSc SINE Alu 1 285 -24 1079 116 7 0 chr2 8327328 8327475 -244929108 + THE1B LTR MaLR 1 148 -216 1919 154 62 11 chr2 8329023 8329380 -244927203 - THE1C LTR MaLR 0 375 1 319 333 124 7 chr2 8329777 8329930 -244926653 - MIR SINE MIR -57 205 35 283 323 40 16 chr2 8330413 8330537 -244926046 + L3 LINE CR1 1385 1511 -66 1912 146 3 0 chr2 8330860 8331161 -244925422 + AluJb SINE Alu 1 302 -10 326 258 50 42 chr2 8332249 8332369 -244924214 - MIR SINE MIR -52 210 90 247 311 13 10 chr2 8332503 8332665 -244923918 - MIR SINE MIR -1 261 48 208 305 95 38 chr2 8332998 8333103 -244923480 + MER5B DNA MER1_type 54 164 -14 249 293 207 21 chr2 8333146 8333286 -244923297 + MER5A DNA MER1_type 4 169 -20 476 240 147 8 chr2 8333761 8333890 -244922693 + MIR SINE MIR 72 218 -44 180 0 0 0 chr2 8333936 8333956 -244922627 + (CA)n Simple_repeat Simple_repeat 1 20 0 297 198 58 12 chr2 8334023 8334109 -244922474 + L1ME4a LINE L1 6030 6119 -2 255 328 15 21 chr2 8334227 8334385 -244922198 + MIR SINE MIR 58 212 -50 230 154 26 0 chr2 8335671 8335710 -244920873 + MLT1I LTR MaLR 98 137 -272 569 273 97 6 chr2 8337547 8337723 -244918860 - MIR SINE MIR -55 207 16 673 296 71 4 chr2 8339358 8339584 -244916999 - MIR SINE MIR 0 262 22 223 198 49 111 chr2 8340868 8340949 -244915634 + MIR SINE MIR 111 186 -76 312 262 98 25 chr2 8341274 8341396 -244915187 + MER115 DNA AcHobo 100 230 -463 638 237 100 52 chr2 8341508 8341757 -244914826 + MER115 DNA AcHobo 426 686 -7 195 100 0 0 chr2 8341957 8341987 -244914596 + (TTCA)n Simple_repeat Simple_repeat 1 30 0 354 230 97 26 chr2 8341987 8342100 -244914483 - L2 LINE L2 -13 3300 3180 23 0 0 0 chr2 8342711 8342734 -244913849 + AT_rich Low_complexity Low_complexity 1 23 0 1252 138 0 0 chr2 8343172 8343375 -244913208 + L1MA5 LINE L1 6097 6299 -1 700 236 44 58 chr2 8344985 8345210 -244911373 + MIR SINE MIR 31 252 -10 586 130 130 0 chr2 8345572 8345710 -244910873 + THE1B LTR MaLR 209 364 0 267 111 0 0 chr2 8345714 8345750 -244910833 + MLT1G LTR MaLR 555 590 0 1903 211 74 18 chr2 8346492 8346937 -244909646 + MLT1D LTR MaLR 36 505 0 504 324 89 12 chr2 8346949 8347196 -244909387 + L2 LINE L2 2671 2936 -378 270 307 64 21 chr2 8347196 8347391 -244909192 + MLT1J2 LTR MaLR 1 207 -239 205 293 49 37 chr2 8347461 8347543 -244909040 - L2 LINE L2 -620 2694 2612 860 245 28 36 chr2 8347581 8347834 -244908749 - MIR SINE MIR -10 252 2 2342 118 21 16 chr2 8348321 8348694 -244907889 - THE1C LTR MaLR 0 375 1 192 278 31 31 chr2 8349340 8349437 -244907146 + L2 LINE L2 2912 3008 -305 449 290 69 0 chr2 8349450 8349595 -244906988 - MIR SINE MIR -74 188 34 280 267 58 0 chr2 8349797 8349883 -244906700 - MER5A DNA MER1_type -77 112 22 509 206 109 23 chr2 8349937 8350112 -244906471 - LTR33 LTR ERVL -3 518 329 453 250 180 0 chr2 8351852 8351980 -244904603 - MIR SINE MIR -1 261 111 1926 125 21 14 chr2 8353612 8353901 -244902682 + AluSx SINE Alu 1 291 -21 306 170 0 0 chr2 8353909 8353956 -244902627 + MLT1G-int LTR MaLR 1684 1730 -5 1071 181 169 68 chr2 8354024 8354349 -244902234 - MLT1A1 LTR MaLR -7 358 1 2232 76 79 9 chr2 8354790 8355119 -244901464 + L1PB2 LINE L1 5799 6150 -1 506 284 43 38 chr2 8356000 8356116 -244900467 - L1ME4a LINE L1 -44 6077 5963 393 75 0 0 chr2 8356116 8356169 -244900414 + (CA)n Simple_repeat Simple_repeat 2 54 0 506 284 43 38 chr2 8356169 8356443 -244900140 - L1ME4a LINE L1 -158 5963 5685 240 35 0 0 chr2 8357406 8357435 -244899148 + (GGGGA)n Simple_repeat Simple_repeat 5 33 0 752 199 0 11 chr2 8357570 8357751 -244898832 + G-rich Low_complexity Low_complexity 2 180 0 201 195 0 0 chr2 8357749 8357790 -244898793 + GA-rich Low_complexity Low_complexity 1 41 0 * 310 207 14 83 chr2 8357900 8358045 -244898538 - MER103 DNA DNA 0 166 32 463 154 0 26 chr2 8358215 8358293 -244898290 + MER63 DNA MER1_type 42 743 -93 229 300 131 23 chr2 8358767 8358897 -244897686 - L2 LINE L2 -219 3053 2910 1478 211 42 20 chr2 8359492 8359847 -244896736 - MLT1A1 LTR MaLR -2 363 1 768 266 105 101 chr2 8360985 8361499 -244895084 + MLT1G LTR MaLR 18 581 -9 1437 194 24 78 chr2 8362012 8362424 -244894159 - MLT1B LTR MaLR 0 390 1 534 239 56 0 chr2 8362443 8362585 -244893998 + MLT1C LTR MaLR 317 466 -1 206 256 12 73 chr2 8362726 8362808 -244893775 + GA-rich Low_complexity Low_complexity 2 78 0 1816 150 3 3 chr2 8363402 8363696 -244892887 + AluJb SINE Alu 1 294 -18 2562 35 0 0 chr2 8363961 8364271 -244892312 + AluY SINE Alu 1 310 -1 261 0 0 0 chr2 8365360 8365389 -244891194 + (CA)n Simple_repeat Simple_repeat 1 29 0 270 0 0 0 chr2 8365465 8365495 -244891088 + (A)n Simple_repeat Simple_repeat 1 30 0 2760 115 24 21 chr2 8366638 8367063 -244889520 + MSTB LTR MaLR 1 426 0 222 313 15 0 chr2 8367693 8367760 -244888823 - MIR SINE MIR -63 145 78 252 325 150 35 chr2 8368292 8368492 -244888091 + MIR SINE MIR 34 256 -6 325 0 44 0 chr2 8368830 8368875 -244887708 + (CA)n Simple_repeat Simple_repeat 1 47 0 213 262 87 39 chr2 8368884 8368987 -244887596 + L3 LINE CR1 355 462 -1115 274 173 74 62 chr2 8369019 8369100 -244887483 - MIR SINE MIR -81 181 100 184 231 77 90 chr2 8369303 8369381 -244887202 - MIR SINE MIR -165 97 21 216 253 0 76 chr2 8370880 8370959 -244885624 - L2 LINE L2 0 3313 3241 1065 241 119 71 chr2 8371820 8372314 -244884269 + MLT1K LTR MaLR 70 587 -1 228 220 17 0 chr2 8372860 8372919 -244883664 + MER69 DNA AcHobo 22 81 -96 1065 259 69 13 chr2 8373370 8373745 -244882838 + MER69 DNA AcHobo 2094 2489 -37 525 299 32 87 chr2 8374101 8374458 -244882125 - L2 LINE L2 -887 2427 2101 1517 252 24 37 chr2 8374458 8374969 -244881614 + MLT1D LTR MaLR 1 504 -1 525 299 32 87 chr2 8374969 8375080 -244881503 - L2 LINE L2 -1213 2101 1985 309 377 8 8 chr2 8375233 8375355 -244881228 + MIR3 SINE MIR 69 190 -18 488 125 0 12 chr2 8377552 8377632 -244878951 - L1MA5 LINE L1 -125 6175 6097 23 0 0 0 chr2 8378070 8378093 -244878490 + AT_rich Low_complexity Low_complexity 1 23 0 1580 112 20 24 chr2 8378720 8378971 -244877612 - MSTB LTR MaLR -176 250 1 875 254 94 94 chr2 8380406 8380446 -244876137 - MLT1H1 LTR MaLR 0 555 516 2546 100 19 6 chr2 8380446 8380805 -244875778 - THE1B LTR MaLR 0 364 1 875 254 94 94 chr2 8380805 8380843 -244875740 - MLT1H1 LTR MaLR -39 516 479 1804 135 14 0 chr2 8380843 8381124 -244875459 - AluSc SINE Alu -24 285 1 875 254 94 94 chr2 8381124 8381458 -244875125 - MLT1H1 LTR MaLR -75 480 142 1867 155 0 13 chr2 8381774 8382083 -244874500 + AluSx SINE Alu 1 305 -7 463 157 67 94 chr2 8382358 8382532 -244874051 - L1MA8 LINE L1 -3 6288 6120 2049 124 3 7 chr2 8382574 8382881 -244873702 + AluSx SINE Alu 1 306 -6 23 0 0 0 chr2 8382920 8382943 -244873640 + AT_rich Low_complexity Low_complexity 1 23 0 877 183 89 10 chr2 8383378 8383684 -244872899 + L1MC/D LINE L1 5122 5446 -760 272 321 46 18 chr2 8383799 8383908 -244872675 + HAL1b LINE L1 800 911 -437 471 97 0 0 chr2 8384716 8384778 -244871805 - Alu SINE Alu -255 63 2 1865 129 41 7 chr2 8384884 8385179 -244871404 + AluSx SINE Alu 3 307 -5 1241 226 79 8 chr2 8385337 8385704 -244870879 - LTR37A LTR ERV1 0 426 34 7177 58 1 0 chr2 8385821 8387042 -244869541 + L1PA7 LINE L1 4957 6178 0 1946 114 3 10 chr2 8389109 8389398 -244867185 - AluSx SINE Alu -25 287 1 1434 191 3 3 chr2 8390689 8390992 -244865591 - AluSg SINE Alu -7 303 1 1122 314 46 24 chr2 8390996 8391537 -244865046 - L2 LINE L2 -541 2773 2221 267 318 61 21 chr2 8391575 8391731 -244864852 - MIR SINE MIR -62 146 9 429 122 0 0 chr2 8391911 8391985 -244864598 + (TTCC)n Simple_repeat Simple_repeat 3 76 0 214 282 51 0 chr2 8392420 8392501 -244864082 - MIR SINE MIR -42 166 79 1012 127 10 35 chr2 8392513 8392938 -244863645 + (GGATG)n Simple_repeat Simple_repeat 1 591 0 180 268 0 0 chr2 8393500 8393541 -244863042 - MIR3 SINE MIR 0 208 168 231 146 0 0 chr2 8393601 8393642 -244862941 + (A)n Simple_repeat Simple_repeat 1 41 0 1822 153 10 3 chr2 8395497 8395805 -244860778 - AluSx SINE Alu -2 310 1 196 298 119 0 chr2 8396011 8396095 -244860488 + L2 LINE L2 3171 3264 -8 428 333 91 15 chr2 8396554 8396752 -244859831 + MIR SINE MIR 39 251 -11 210 320 87 10 chr2 8397278 8397381 -244859202 - L2 LINE L2 -4 3268 3158 332 329 73 81 chr2 8397494 8397838 -244858745 + L2 LINE L2 2932 3272 0 648 259 165 35 chr2 8398123 8398223 -244858360 + L1 LINE L1 3527 3613 -2533 1481 187 20 13 chr2 8398223 8398522 -244858061 - AluJb SINE Alu -11 301 1 648 259 165 35 chr2 8398522 8398791 -244857792 + L1 LINE L1 3613 3944 -2202 22 35 0 0 chr2 8398922 8398951 -244857632 + AT_rich Low_complexity Low_complexity 1 29 0 367 310 141 46 chr2 8399002 8399286 -244857297 + L1 LINE L1 4025 4335 -1811 1833 152 0 3 chr2 8399407 8399711 -244856872 + AluSx SINE Alu 1 303 0 23 0 0 0 chr2 8399914 8399937 -244856646 + AT_rich Low_complexity Low_complexity 1 23 0 276 296 87 36 chr2 8400161 8400357 -244856226 - L2 LINE L2 -212 3060 2855 262 232 0 0 chr2 8400437 8400493 -244856090 + MER4-int LTR ERV1 1107 1162 -5436 615 259 0 0 chr2 8400493 8401043 -244855540 + (TG)n Simple_repeat Simple_repeat 1 550 0 370 346 82 27 chr2 8401069 8401445 -244855138 - L2 LINE L2 -593 2721 2325 188 327 131 13 chr2 8402032 8402185 -244854398 - MIR SINE MIR -57 205 35 260 331 40 16 chr2 8402668 8402792 -244853791 + L3 LINE CR1 1385 1511 -66 1919 146 3 0 chr2 8403115 8403417 -244853166 + AluJb SINE Alu 1 303 -9 231 254 136 80 chr2 8404476 8404689 -244851894 - MIR SINE MIR -25 237 13 208 305 95 38 chr2 8405258 8405363 -244851220 + MER5B DNA MER1_type 54 164 -14 219 317 19 29 chr2 8405406 8405510 -244851073 + MER5A DNA MER1_type 4 106 -83 290 275 18 46 chr2 8406392 8406501 -244850082 + MIR SINE MIR 37 142 -66 324 350 0 0 chr2 8406749 8406852 -244849731 + CT-rich Low_complexity Low_complexity 4 106 0 1993 142 0 0 chr2 8406959 8407261 -244849322 + AluSx SINE Alu 1 302 -10 555 16 0 0 chr2 8407268 8407332 -244849251 + (GGAA)n Simple_repeat Simple_repeat 4 67 0 21 57 0 0 chr2 8408473 8408508 -244848075 + AT_rich Low_complexity Low_complexity 1 35 0 609 160 111 50 chr2 8408509 8408690 -244847893 + MER20 DNA MER1_type 1 192 -27 185 299 26 65 chr2 8413198 8413275 -244843308 - L2 LINE L2 -223 3049 2976 424 282 103 20 chr2 8413615 8413810 -244842773 + MIR SINE MIR 48 258 -4 1831 146 14 0 chr2 8415459 8415773 -244840810 - AluSx SINE Alu 0 312 1 340 301 9 9 chr2 8416081 8416194 -244840389 + MER94 DNA DNA 1 113 -21 185 62 0 31 chr2 8416634 8416666 -244839917 + (TA)n Simple_repeat Simple_repeat 1 31 0 21 0 0 0 chr2 8416997 8417018 -244839565 + AT_rich Low_complexity Low_complexity 1 21 0 1662 165 7 14 chr2 8417018 8417315 -244839268 + AluJb SINE Alu 1 295 -17 249 315 87 47 chr2 8418874 8419001 -244837582 + L2 LINE L2 3141 3272 0 444 258 44 85 chr2 8420525 8420669 -244835914 + L1ME4a LINE L1 5530 5661 -460 2269 97 3 0 chr2 8420669 8420979 -244835604 + AluSp SINE Alu 1 311 -2 444 258 44 85 chr2 8420979 8421082 -244835501 + L1ME4a LINE L1 5661 5767 -354 4188 80 11 25 chr2 8421156 8421718 -244834865 - MER41A LTR ERV1 0 554 1 402 366 24 0 chr2 8421727 8421891 -244834692 + MIR SINE MIR 83 250 -12 339 232 89 0 chr2 8422079 8422191 -244834392 + L1ME4a LINE L1 5991 6112 -9 241 269 0 0 chr2 8422235 8422287 -244834296 - L3 LINE CR1 -7 1570 1519 335 277 32 11 chr2 8422435 8422529 -244834054 + L2 LINE L2 3173 3268 -4 3751 142 48 2 chr2 8422684 8423291 -244833292 + MER41B LTR ERV1 1 635 0 717 237 19 13 chr2 8424551 8424707 -244831876 - MER5B DNA MER1_type -21 157 1 350 311 68 0 chr2 8425141 8425244 -244831339 - L2 LINE L2 -46 3226 3117 2747 133 166 0 chr2 8425537 8425989 -244830594 - MER1A DNA MER1_type -1 528 2 316 296 86 49 chr2 8426589 8426751 -244829832 - MIR3 SINE MIR -11 197 30 711 276 70 0 chr2 8429405 8429604 -244826979 - MIR SINE MIR -36 226 14 402 21 0 0 chr2 8432251 8432298 -244824285 + (CATA)n Simple_repeat Simple_repeat 1 47 0 272 321 46 18 chr2 8433346 8433455 -244823128 - HAL1b LINE L1 -437 911 800 1100 173 82 8 chr2 8433570 8433901 -244822682 - L1MC/D LINE L1 -760 5386 5097 303 248 111 26 chr2 8433929 8434046 -244822537 - HAL1b LINE L1 -476 872 746 22 88 0 0 chr2 8434073 8434130 -244822453 + AT_rich Low_complexity Low_complexity 1 57 0 2256 87 0 7 chr2 8434210 8434520 -244822063 - AluY SINE Alu -3 308 1 566 192 54 15 chr2 8434940 8435070 -244821513 + MIR SINE MIR 108 242 -20 570 277 70 18 chr2 8435099 8435384 -244821199 - HAL1 LINE L1 -834 1673 1374 473 283 29 83 chr2 8435390 8435656 -244820927 - L1MEd LINE L1 -1248 1242 930 683 328 37 61 chr2 8435843 8436325 -244820258 - L1MEd LINE L1 -1248 1242 794 294 286 84 59 chr2 8437014 8437287 -244819296 - HERV16 LTR ERVL -505 5259 4980 348 305 106 69 chr2 8437325 8437478 -244819105 - HERV16 LTR ERVL -931 4833 4687 1848 112 0 121 chr2 8437478 8437818 -244818765 - AluSx SINE Alu -3 299 1 348 305 106 69 chr2 8437818 8438126 -244818457 - HERV16 LTR ERVL -1077 4687 4355 1094 304 92 27 chr2 8438313 8439133 -244817450 - HERV16 LTR ERVL -2691 2305 1709 1883 307 73 44 chr2 8439480 8440002 -244816581 - HERV16 LTR ERVL -3785 1211 706 3276 133 82 0 chr2 8440002 8440489 -244816094 - MER1A DNA MER1_type 0 527 1 1883 307 73 44 chr2 8440489 8441072 -244815511 - HERV16 LTR ERVL -4290 706 74 291 268 0 0 chr2 8441674 8441745 -244814838 + CT-rich Low_complexity Low_complexity 3 73 0 27 0 0 0 chr2 8442626 8442653 -244813930 + AT_rich Low_complexity Low_complexity 1 27 0 198 217 0 36 chr2 8443124 8443207 -244813376 + CT-rich Low_complexity Low_complexity 3 82 0 892 182 109 28 chr2 8443309 8443401 -244813182 - ORSL DNA AcHobo 0 275 192 5560 48 6 0 chr2 8443401 8444074 -244812509 + L1PA7 LINE L1 5473 6149 -5 892 182 109 28 chr2 8444074 8444228 -244812355 - ORSL DNA AcHobo -83 192 9 513 269 40 23 chr2 8444265 8444440 -244812143 - MER5B DNA MER1_type 0 178 1 256 245 174 52 chr2 8444447 8444602 -244811981 - MER5A DNA MER1_type -3 186 13 493 293 84 27 chr2 8444678 8444903 -244811680 - MIR SINE MIR -13 249 12 2057 116 7 10 chr2 8445162 8445472 -244811111 + AluSx SINE Alu 1 309 -3 765 184 40 17 chr2 8445779 8445953 -244810630 - Zaphod DNA AcHobo -257 3774 3597 2118 244 92 34 chr2 8445954 8446738 -244809845 - Zaphod DNA AcHobo -3042 989 161 1630 205 89 27 chr2 8446768 8447217 -244809366 - MLT1D LTR MaLR -28 477 1 426 208 77 54 chr2 8447224 8447354 -244809229 - Zaphod DNA AcHobo -3875 156 24 193 324 59 0 chr2 8447386 8447454 -244809129 + MIR SINE MIR 185 256 -6 248 289 114 48 chr2 8448407 8448819 -244807764 + L1MC4a LINE L1 4334 4772 -1374 860 317 48 33 chr2 8449209 8449814 -244806769 + L1MC4a LINE L1 5292 5905 -1903 2332 71 0 0 chr2 8449969 8450263 -244806320 - AluY SINE Alu -16 295 2 242 235 37 25 chr2 8450288 8450369 -244806214 + CT-rich Low_complexity Low_complexity 4 85 0 408 238 57 78 chr2 8450392 8450461 -244806122 + L1ME4a LINE L1 5933 6002 -119 1828 162 26 18 chr2 8450461 8450800 -244805783 + MER2 DNA MER2_type 3 344 0 408 238 57 78 chr2 8450800 8450923 -244805660 + L1ME4a LINE L1 6002 6121 0 252 304 78 35 chr2 8451206 8451321 -244805262 - L2 LINE L2 -8 3305 3186 223 247 0 90 chr2 8452499 8452677 -244803906 + (TTGGGG)n Simple_repeat Simple_repeat 6 167 0 329 295 0 0 chr2 8452783 8452878 -244803705 + (TG)n Simple_repeat Simple_repeat 2 96 0 2231 153 75 0 chr2 8454260 8454658 -244801925 + MSTA LTR MaLR 1 428 0 475 72 0 12 chr2 8454756 8454839 -244801744 - MER96B DNA MER1_type? -239 178 97 912 119 3 226 chr2 8454870 8455207 -244801376 + L1MA4 LINE L1 6030 6291 -9 295 150 17 0 chr2 8455220 8455280 -244801303 - MER96B DNA MER1_type? -307 110 50 525 288 112 15 chr2 8455627 8455832 -244800751 + MIR SINE MIR 28 252 -10 235 178 14 55 chr2 8456679 8456752 -244799831 + MLT1J LTR MaLR 429 600 -15 2140 133 0 0 chr2 8458794 8459094 -244797489 - AluSx SINE Alu -12 300 1 2216 125 0 0 chr2 8459256 8459553 -244797030 + AluSg SINE Alu 1 297 -13 404 236 6 0 chr2 8460070 8460248 -244796335 + CT-rich Low_complexity Low_complexity 2 180 0 541 307 53 5 chr2 8460663 8460852 -244795731 - MIR SINE MIR -1 261 64 866 217 66 26 chr2 8461170 8461474 -244795109 - MER33 DNA MER1_type 0 324 9 409 318 88 7 chr2 8461742 8461890 -244794693 + MIR SINE MIR 88 247 -15 2794 10 0 0 chr2 8463531 8463827 -244792756 - AluYb8 SINE Alu -2 316 21 322 333 111 0 chr2 8463989 8464124 -244792459 + L2 LINE L2 3121 3270 -2 2341 114 0 0 chr2 8465594 8465900 -244790683 - AluSx SINE Alu -6 306 1 440 300 36 0 chr2 8465902 8466042 -244790541 - MIR SINE MIR -70 192 48 203 274 219 14 chr2 8466939 8467085 -244789498 + MIR SINE MIR 87 262 0 205 290 87 0 chr2 8467294 8467363 -244789220 - MIR SINE MIR -136 126 52 319 320 66 39 chr2 8468163 8468344 -244788239 - MIR SINE MIR -57 205 20 432 188 10 30 chr2 8469097 8469198 -244787385 - MIR3 SINE MIR -7 201 103 216 320 30 40 chr2 8469886 8469986 -244786597 + MIR SINE MIR 45 143 -65 341 333 79 12 chr2 8471073 8471238 -244785345 + L1MB4 LINE L1 4637 4812 -1334 226 266 11 21 chr2 8471305 8471399 -244785184 + L1MB4 LINE L1 4918 5010 -1136 2352 222 3 53 chr2 8471613 8471875 -244784708 + L1MB4 LINE L1 5570 5844 -336 2527 57 0 63 chr2 8471875 8472207 -244784376 + AluY SINE Alu 1 311 0 2352 222 3 53 chr2 8472207 8472583 -244784000 + L1MB4 LINE L1 5844 6176 -4 1568 213 22 14 chr2 8472583 8472945 -244783638 + L1MB8 LINE L1 5814 6178 0 854 291 137 18 chr2 8472958 8473577 -244783006 + L1ME3A LINE L1 5263 5955 -215 1295 124 30 0 chr2 8473785 8473986 -244782597 + L1PA10 LINE L1 5962 6168 0 2191 91 18 3 chr2 8475177 8475462 -244781121 - AluSx SINE Alu -14 298 10 296 173 0 0 chr2 8476047 8476099 -244780484 + MADE1 DNA Mariner 29 80 0 809 138 0 36 chr2 8476161 8476299 -244780284 - FLAM_C SINE Alu 0 133 1 528 122 0 0 chr2 8476740 8476822 -244779761 + (TTCC)n Simple_repeat Simple_repeat 3 84 0 234 224 35 35 chr2 8478608 8478693 -244777890 - MLT1K LTR MaLR -13 575 491 234 260 77 96 chr2 8478940 8479044 -244777539 - MER5A DNA MER1_type -84 105 4 356 241 11 35 chr2 8479055 8479142 -244777441 - MIR SINE MIR -165 97 13 312 27 0 0 chr2 8480824 8480861 -244775722 + (TTCA)n Simple_repeat Simple_repeat 1 37 0 259 283 137 47 chr2 8482203 8482415 -244774168 + MLT1L LTR MaLR 2 232 -383 35 0 0 0 chr2 8483126 8483161 -244773422 + AT_rich Low_complexity Low_complexity 1 35 0 625 324 29 11 chr2 8483176 8483448 -244773135 + MLT1L LTR MaLR 6 282 -333 388 177 76 0 chr2 8483587 8483666 -244772917 - MLT1J1 LTR MaLR -123 323 239 532 184 3 0 chr2 8483908 8484015 -244772568 - MLT1J1 LTR MaLR -317 133 25 526 229 30 8 chr2 8484012 8484143 -244772440 - MER45A DNA AcHobo -30 148 15 * 578 111 30 0 chr2 8484958 8485057 -244771526 + (ATGGTG)n Simple_repeat Simple_repeat 4 105 0 353 276 143 0 chr2 8485507 8485612 -244770971 - MIR SINE MIR -20 242 123 1921 125 86 44 chr2 8485829 8486189 -244770394 - THE1C LTR MaLR 0 375 1 299 311 36 24 chr2 8486390 8486557 -244770026 - L1ME4a LINE L1 -18 6103 5935 912 258 26 45 chr2 8486630 8487052 -244769531 - L1ME4a LINE L1 -161 5960 5547 2498 157 9 19 chr2 8488547 8489012 -244767571 - L1MB1 LINE L1 0 6168 5709 217 325 50 0 chr2 8489013 8489093 -244767490 - MIR SINE MIR -110 152 69 376 301 5 88 chr2 8489345 8489387 -244767196 - MER5B DNA MER1_type -1 177 133 2267 43 75 7 chr2 8489387 8489669 -244766914 - AluY SINE Alu -10 301 1 376 301 5 88 chr2 8489669 8489819 -244766764 - MER5B DNA MER1_type -45 133 1 362 266 105 0 chr2 8491592 8491716 -244764867 - MIR SINE MIR -23 239 103 501 211 141 14 chr2 8491956 8492098 -244764485 + MER3 DNA MER1_type 36 195 -14 444 246 42 0 chr2 8494417 8494535 -244762048 - MIR SINE MIR -62 146 24 2362 75 0 13 chr2 8495221 8495526 -244761057 - AluY SINE Alu -10 301 1 180 111 0 0 chr2 8496350 8496377 -244760206 + (GAAAA)n Simple_repeat Simple_repeat 3 29 0 645 248 63 33 chr2 8496654 8497079 -244759504 - MLT1C LTR MaLR -3 464 2 280 349 8 31 chr2 8499352 8499481 -244757102 - L3 LINE CR1 -63 1514 1389 241 280 32 32 chr2 8499553 8499646 -244756937 - MIR SINE MIR -74 188 96 239 324 59 35 chr2 8499732 8499902 -244756681 - L3 LINE CR1 -183 1394 1221 2888 131 20 4 chr2 8500026 8500483 -244756100 - L1PA16 LINE L1 0 6166 5703 344 274 228 23 chr2 8501138 8501353 -244755230 + MIR SINE MIR 1 259 -3 528 318 112 9 chr2 8501762 8501995 -244754588 + MIR SINE MIR 3 259 -3 185 91 0 30 chr2 8502814 8502847 -244753736 + (GGGA)n Simple_repeat Simple_repeat 4 35 0 454 359 30 0 chr2 8503654 8503821 -244752762 - MIR SINE MIR -70 192 21 492 269 52 68 chr2 8503833 8504272 -244752311 + L1ME4a LINE L1 5520 5951 -170 382 246 36 14 chr2 8504425 8504563 -244752020 + L1ME4a LINE L1 5965 6105 -16 1354 130 5 0 chr2 8504575 8504782 -244751801 - AluSp SINE Alu -3 310 103 184 264 171 64 chr2 8505885 8506025 -244750558 + MIR3 SINE MIR 30 184 -24 2136 142 52 37 chr2 8506129 8506673 -244749910 + MLT2A2 LTR ERVL 1 554 0 1545 166 18 3 chr2 8507044 8507327 -244749256 - MLT1B LTR MaLR -8 382 96 26 30 0 0 chr2 8507349 8507382 -244749201 + AT_rich Low_complexity Low_complexity 1 33 0 2114 42 98 0 chr2 8507453 8507718 -244748865 - L1PA5 LINE L1 -7 6147 5857 244 246 53 0 chr2 8507718 8507775 -244748808 - MLT1B LTR MaLR -330 60 1 227 347 0 11 chr2 8508006 8508101 -244748482 + MIR SINE MIR 71 164 -98 2601 167 5 14 chr2 8508456 8508888 -244747695 + MSTA LTR MaLR 1 428 0 189 386 0 20 chr2 8509102 8509203 -244747380 + MIR SINE MIR 49 147 -115 218 286 0 32 chr2 8509286 8509349 -244747234 + MIR SINE MIR 196 256 -6 372 284 17 57 chr2 8510459 8510613 -244745970 - MIR SINE MIR -14 248 100 2431 143 59 7 chr2 8510613 8511020 -244745563 + MSTA LTR MaLR 1 428 0 372 284 17 57 chr2 8511020 8511041 -244745542 - MIR SINE MIR -162 100 80 473 168 184 0 chr2 8512219 8512344 -244744239 + LTR16C LTR ERVL 228 375 -116 1154 211 81 88 chr2 8512392 8512485 -244744098 + MLT1C LTR MaLR 16 108 -359 2565 85 48 20 chr2 8512485 8512839 -244743744 - THE1B LTR MaLR 0 364 1 1154 211 81 88 chr2 8512839 8513190 -244743393 + MLT1C LTR MaLR 108 457 -10 421 175 97 35 chr2 8513199 8513313 -244743270 + LTR16C LTR ERVL 371 491 0 241 306 28 0 chr2 8513909 8513981 -244742602 + MIR3 SINE MIR 112 185 -23 208 333 76 49 chr2 8514024 8514168 -244742415 + MIR SINE MIR 109 256 -6 1339 209 23 83 chr2 8514859 8515257 -244741326 - MLT1A2 LTR MaLR 0 374 1 199 286 107 27 chr2 8515436 8515548 -244741035 - MIR SINE MIR -33 229 109 2093 123 3 0 chr2 8515559 8515859 -244740724 + AluSx SINE Alu 1 301 -11 485 353 105 0 chr2 8516712 8516902 -244739681 + MIR SINE MIR 53 262 0 244 264 132 9 chr2 8517481 8517587 -244738996 - MIR SINE MIR -65 197 79 218 81 27 0 chr2 8518326 8518363 -244738220 + (TCC)n Simple_repeat Simple_repeat 1 38 0 263 311 81 20 chr2 8518684 8518832 -244737751 + MIR SINE MIR 71 227 -35 186 328 17 0 chr2 8519152 8519210 -244737373 + L2 LINE L2 3245 3303 -10 321 236 0 0 chr2 8519226 8519298 -244737285 - MIR SINE MIR -138 124 53 501 254 46 130 chr2 8519647 8519727 -244736856 - MIR SINE MIR -2 260 175 1855 130 7 3 chr2 8519727 8520012 -244736571 + AluSx SINE Alu 6 291 -21 225 0 0 0 chr2 8520012 8520037 -244736546 + (TA)n Simple_repeat Simple_repeat 1 25 0 501 254 46 130 chr2 8520037 8520239 -244736344 - MIR SINE MIR -85 177 1 487 290 12 25 chr2 8521080 8521242 -244735341 - MER63 DNA MER1_type -276 786 1 202 133 0 0 chr2 8521486 8521516 -244735067 + MIR SINE MIR 117 146 -62 302 123 18 18 chr2 8522498 8522555 -244734028 + LTR33A LTR ERVL 447 503 -20 290 260 39 13 chr2 8524049 8524126 -244732457 + LTR67 LTR ERVL 99 177 -380 * 716 273 51 72 chr2 8524085 8524514 -244732069 + MLT1L LTR MaLR 196 615 0 328 343 84 17 chr2 8524542 8524720 -244731863 - L1MC4a LINE L1 -1878 5930 5741 422 261 92 15 chr2 8525892 8526022 -244730561 - MIR3 SINE MIR -16 192 53 419 308 39 19 chr2 8526046 8526202 -244730381 - MIR SINE MIR -70 192 34 2504 198 98 100 chr2 8526397 8526463 -244730120 + L1MC3 LINE L1 6840 6905 -880 1684 153 0 27 chr2 8526463 8526757 -244729826 + AluJo SINE Alu 14 299 -13 2504 198 98 100 chr2 8526757 8526971 -244729612 + L1MC3 LINE L1 6905 7118 -667 282 200 0 17 chr2 8526971 8527031 -244729552 + MLT1C LTR MaLR 50 108 -459 2504 198 98 100 chr2 8527031 8527637 -244728946 + L1MC3 LINE L1 7118 7784 -1 411 314 59 12 chr2 8527674 8527843 -244728740 + MER5B DNA MER1_type 2 178 0 213 161 286 0 chr2 8528860 8528916 -244727667 - MIR SINE MIR -121 141 70 453 158 0 0 chr2 8529153 8529229 -244727354 + L1MB3 LINE L1 6101 6176 -7 380 123 14 0 chr2 8530962 8531035 -244725548 + (CA)n Simple_repeat Simple_repeat 1 74 0 192 270 139 74 chr2 8531985 8532200 -244724383 + L2 LINE L2 2437 2665 -649 431 228 18 78 chr2 8532563 8532730 -244723853 + MIR SINE MIR 96 252 -10 2238 113 0 0 chr2 8532924 8533225 -244723358 - AluSq SINE Alu -8 305 5 235 308 0 0 chr2 8533708 8533884 -244722699 + GA-rich Low_complexity Low_complexity 1 176 0 2899 206 113 10 chr2 8533900 8534614 -244721969 + Charlie1a DNA MER1_type 109 896 -559 289 179 0 36 chr2 8535096 8535180 -244721403 - L1MA7 LINE L1 -147 6144 6064 850 105 15 0 chr2 8535180 8535306 -244721277 + L1MA7 LINE L1 6157 6291 0 733 220 77 0 chr2 8535681 8535863 -244720720 + MLT1C LTR MaLR 270 465 -2 406 293 0 0 chr2 8535877 8535976 -244720607 - MIR SINE MIR -107 155 57 255 301 221 15 chr2 8536221 8536420 -244720163 + MIR SINE MIR 22 261 -1 180 380 60 0 chr2 8538205 8538305 -244718278 - MIR SINE MIR -59 203 98 299 309 131 36 chr2 8538439 8538691 -244717892 - L3b LINE CR1 -164 1419 1144 236 306 13 19 chr2 8540720 8540877 -244715706 + CT-rich Low_complexity Low_complexity 2 157 0 250 311 68 0 chr2 8543223 8543326 -244713257 - L2 LINE L2 -214 3058 2949 195 152 0 0 chr2 8543801 8543834 -244712749 - MIR SINE MIR -117 145 113 181 277 15 0 chr2 8544896 8544961 -244711622 + L2 LINE L2 2703 2768 -546 495 243 97 5 chr2 8544975 8545160 -244711423 - MIR SINE MIR -15 247 46 348 254 107 57 chr2 8546951 8547128 -244709455 - MIR SINE MIR -55 207 22 363 195 13 0 chr2 8548261 8548338 -244708245 + MIR SINE MIR 66 143 -119 548 208 104 69 chr2 8548891 8549064 -244707519 + MER63A DNA MER1_type 3 181 -29 456 221 82 76 chr2 8549202 8549360 -244707223 + MIR SINE MIR 17 175 -87 304 346 121 27 chr2 8549440 8550416 -244706167 + L2 LINE L2 1675 2742 -572 411 258 93 7 chr2 8550860 8551011 -244705572 - MER20B DNA MER1_type -604 179 16 338 273 99 16 chr2 8551019 8551140 -244705443 + L2 LINE L2 3142 3272 0 2071 158 92 8 chr2 8552087 8552480 -244704103 + MSTB LTR MaLR 1 426 0 916 278 14 0 chr2 8552674 8552897 -244703686 - MIR SINE MIR -25 237 12 860 273 96 35 chr2 8552912 8553404 -244703179 - MLT1F1 LTR MaLR 0 567 1 3681 215 30 30 chr2 8555360 8555583 -244701000 - Charlie1 DNA MER1_type -7 2754 2532 2378 101 0 3 chr2 8555583 8555891 -244700692 - AluSx SINE Alu -1 311 5 3681 215 30 30 chr2 8555891 8556605 -244699978 - Charlie1 DNA MER1_type -228 2533 1817 383 244 37 37 chr2 8557132 8557267 -244699316 + MIR3 SINE MIR 38 172 -36 2410 208 50 11 chr2 8557584 8558142 -244698441 + MLT1G LTR MaLR 11 590 0 520 314 105 56 chr2 8558210 8559147 -244697436 + L1ME2 LINE L1 4974 7750 -211 324 269 21 78 chr2 8559488 8559629 -244696954 + MER69A DNA AcHobo 28 160 -17 1684 271 39 58 chr2 8560301 8561020 -244695563 + L1M3c LINE L1 1 705 -5436 650 207 8 32 chr2 8561016 8561254 -244695329 + L1M3c LINE L1 1341 1661 -4550 * 463 177 0 0 chr2 8561255 8561334 -244695249 - Tigger5 DNA MER2_type 0 2323 2245 * 1212 211 4 22 chr2 8561328 8561560 -244695023 - Tigger5 DNA MER2_type -2095 228 1 1555 263 99 9 chr2 8561565 8561974 -244694609 + L1M4c LINE L1 1436 1807 -4575 2115 125 0 0 chr2 8561974 8562287 -244694296 - AluSg SINE Alu 0 313 1 1555 263 99 9 chr2 8562287 8563056 -244693527 + L1M4c LINE L1 1807 2760 -3622 1656 104 5 0 chr2 8563056 8563268 -244693315 - AluSq SINE Alu -19 294 82 1555 263 99 9 chr2 8563268 8563387 -244693196 + L1M4c LINE L1 2760 2867 -3515 1770 166 48 17 chr2 8563387 8563594 -244692989 + L1MA9 LINE L1 5105 5304 -1008 7387 21 0 0 chr2 8563594 8564514 -244692069 - L1PA4 LINE L1 -11 6144 5224 1770 166 48 17 chr2 8564514 8565098 -244691485 + L1MA9 LINE L1 5304 6143 -169 1770 139 52 12 chr2 8565098 8565443 -244691140 + L1MA9 LINE L1 5954 6312 0 1770 166 48 17 chr2 8565443 8565619 -244690964 + L1MA9 LINE L1 6143 6312 0 227 250 17 0 chr2 8565663 8565723 -244690860 + L1MB1 LINE L1 6102 6162 -6 2409 84 0 7 chr2 8565725 8566023 -244690560 - AluY SINE Alu -15 296 1 583 264 6 12 chr2 8566048 8566211 -244690372 + L1MA10 LINE L1 6159 6320 -14 596 315 56 24 chr2 8567334 8567744 -244688839 + L1ME4a LINE L1 5699 6121 0 215 315 33 22 chr2 8569984 8570076 -244686507 - MIR SINE MIR -82 180 88 368 210 217 7 chr2 8570303 8570446 -244686137 - MER5A DNA MER1_type -10 179 7 219 346 13 0 chr2 8570667 8570745 -244685838 + L2 LINE L2 3227 3305 -8 1764 192 32 24 chr2 8571040 8571451 -244685132 + MLT2D LTR ERVL 1 414 0 210 233 0 0 chr2 8571802 8571862 -244684721 + GA-rich Low_complexity Low_complexity 2 61 0 307 70 0 0 chr2 8574017 8574060 -244682523 - AluSp/q SINE Alu -8 295 253 193 286 223 0 chr2 8574512 8574624 -244681959 + L2 LINE L2 3136 3272 0 286 250 0 0 chr2 8574821 8574881 -244681702 + L2 LINE L2 2999 3058 -214 194 207 17 0 chr2 8575008 8575066 -244681517 + (CA)n Simple_repeat Simple_repeat 1 59 0 543 281 22 43 chr2 8575555 8575740 -244680843 + MIR SINE MIR 23 203 -59 315 241 139 0 chr2 8575850 8575958 -244680625 - MIR SINE MIR -70 192 70 279 235 113 17 chr2 8576737 8576852 -244679731 - MIR3 SINE MIR -78 130 5 429 242 32 20 chr2 8578564 8578909 -244677674 + (CA)n Simple_repeat Simple_repeat 1 349 0 367 274 0 11 chr2 8579204 8579299 -244677284 + MIR SINE MIR 58 151 -57 376 325 29 10 chr2 8579693 8579899 -244676684 - L1MC4a LINE L1 -1929 5879 5670 252 326 22 0 chr2 8580316 8580405 -244676178 + MIR SINE MIR 120 210 -52 289 190 122 54 chr2 8580981 8581111 -244675472 + MIR SINE MIR 48 140 -68 392 274 46 4 chr2 8582572 8582731 -244673852 - MIR3 SINE MIR 0 262 51 423 239 8 51 chr2 8582742 8582859 -244673724 + L2 LINE L2 3201 3312 -1 279 308 46 39 chr2 8584507 8584637 -244671946 + MIR3 SINE MIR 78 208 0 197 265 0 0 chr2 8585773 8585822 -244670761 - L2 LINE L2 -10 3262 3214 475 263 26 46 chr2 8587160 8587312 -244669271 + MIR SINE MIR 28 176 -86 605 259 7 0 chr2 8587388 8587523 -244669060 + MIR SINE MIR 16 151 -111 431 209 51 82 chr2 8587524 8587682 -244668901 + L1MB4 LINE L1 6022 6174 -6 340 232 11 11 chr2 8587673 8587768 -244668815 + L1MB8 LINE L1 6078 6172 -6 * 374 256 0 60 chr2 8587782 8587915 -244668668 + MIR SINE MIR 137 261 -1 375 320 46 34 chr2 8587928 8588030 -244668553 - MIR SINE MIR -60 202 96 2413 47 34 24 chr2 8588030 8588327 -244668256 - AluY SINE Alu -11 300 1 375 320 46 34 chr2 8588327 8588399 -244668184 - MIR SINE MIR -166 96 26 220 253 195 0 chr2 8590466 8590553 -244666030 - MIR SINE MIR -113 149 46 332 293 69 9 chr2 8590944 8591060 -244665523 - MIR SINE MIR -111 151 29 2370 97 7 0 chr2 8591666 8591964 -244664619 + AluSc SINE Alu 1 300 -9 189 192 14 27 chr2 8591998 8592071 -244664512 + (TA)n Simple_repeat Simple_repeat 1 72 0 242 137 59 0 chr2 8592085 8592136 -244664447 + G-rich Low_complexity Low_complexity 3 56 0 769 97 0 82 chr2 8592137 8592333 -244664250 + (GGGGA)n Simple_repeat Simple_repeat 1 180 0 378 123 66 8 chr2 8592443 8592565 -244664018 + (TG)n Simple_repeat Simple_repeat 1 129 0 203 149 0 21 chr2 8592619 8592666 -244663917 + (TG)n Simple_repeat Simple_repeat 1 46 0 198 278 175 0 chr2 8593067 8593164 -244663419 + MIR SINE MIR 15 128 -134 2345 114 0 0 chr2 8593621 8593927 -244662656 + AluSx SINE Alu 1 306 -6 482 319 61 24 chr2 8596304 8596510 -244660073 + L1ME4a LINE L1 5516 5740 -381 2464 96 27 0 chr2 8596510 8596875 -244659708 + L1PA8 LINE L1 5798 6172 0 482 319 61 24 chr2 8596875 8596997 -244659586 + L1ME4a LINE L1 5740 5856 -265 408 250 92 0 chr2 8597237 8597433 -244659150 + L1ME4a LINE L1 5728 5941 -180 24 67 0 0 chr2 8597433 8597478 -244659105 + AT_rich Low_complexity Low_complexity 1 45 0 1901 186 38 39 chr2 8597547 8598152 -244658431 + L1MB7 LINE L1 5015 5674 -510 2230 191 23 29 chr2 8598603 8598690 -244657893 + L1MB7 LINE L1 5652 5738 -446 2091 133 3 7 chr2 8598690 8598999 -244657584 + AluSx SINE Alu 1 308 -4 2230 191 23 29 chr2 8598999 8599428 -244657155 + L1MB7 LINE L1 5738 6165 -19 5509 147 78 31 chr2 8599451 8599783 -244656800 + Tigger3b DNA MER2_type 1 316 -2712 2368 94 0 0 chr2 8599783 8600082 -244656501 - AluSx SINE Alu -13 299 1 5509 147 78 31 chr2 8600082 8600592 -244655991 + Tigger3b DNA MER2_type 316 917 -2111 236 30 30 0 chr2 8600592 8600625 -244655958 + (CTCA)n Simple_repeat Simple_repeat 1 34 0 5509 147 78 31 chr2 8600625 8600955 -244655628 + Tigger3b DNA MER2_type 917 1230 -1 271 352 28 28 chr2 8601918 8602063 -244654520 - L3 LINE CR1 -198 1379 1235 270 276 60 17 chr2 8602555 8602671 -244653912 + MIR3 SINE MIR 58 178 -30 278 311 73 34 chr2 8603814 8603926 -244652657 - MIR SINE MIR -57 205 82 1157 254 88 31 chr2 8603926 8604280 -244652303 - MLT1A2 LTR MaLR 0 374 1 278 311 73 34 chr2 8604280 8604344 -244652239 - MIR SINE MIR -180 82 22 395 36 36 0 chr2 8604345 8604401 -244652182 + (CTACT)n Simple_repeat Simple_repeat 4 61 0 187 339 71 24 chr2 8605760 8605887 -244650696 - MIR SINE MIR -27 235 103 2610 113 6 6 chr2 8605896 8606260 -244650323 - THE1B LTR MaLR 0 364 1 250 307 39 31 chr2 8607095 8607222 -244649361 - MIR3 SINE MIR -16 192 65 1810 189 16 18 chr2 8607251 8607429 -244649154 + MLT1B LTR MaLR 1 178 -212 1627 192 0 26 chr2 8607429 8607741 -244648842 + AluJb SINE Alu 1 304 -8 1810 189 16 18 chr2 8607741 8607943 -244648640 + MLT1B LTR MaLR 178 380 -10 2172 109 0 7 chr2 8608357 8608659 -244647924 - AluSq SINE Alu -13 300 1 542 292 120 5 chr2 8608849 8609058 -244647525 + MIR SINE MIR 5 237 -25 559 266 67 37 chr2 8609648 8609974 -244646609 + MLT1J2 LTR MaLR 64 403 -6 184 219 205 26 chr2 8610312 8610463 -244646120 - L2 LINE L2 -1224 2090 1913 283 342 37 62 chr2 8613113 8613214 -244643369 + HAL1 LINE L1 8 110 -2397 779 228 59 30 chr2 8613214 8613416 -244643167 - MER3 DNA MER1_type -1 208 1 283 342 37 62 chr2 8613416 8613557 -244643026 + HAL1 LINE L1 110 244 -2263 299 312 23 69 chr2 8613560 8613733 -244642850 - MER115 DNA AcHobo -4 689 525 1205 216 24 80 chr2 8613735 8614147 -244642436 - MLT1B LTR MaLR 0 390 2 1055 251 129 34 chr2 8614149 8614528 -244642055 - MER115 DNA AcHobo -168 525 111 229 341 12 0 chr2 8614593 8614678 -244641905 + HAL1 LINE L1 235 320 -2187 1946 267 66 22 chr2 8614708 8615292 -244641291 + HAL1 LINE L1 418 974 -1533 252 0 0 0 chr2 8615292 8615320 -244641263 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1946 267 66 22 chr2 8615320 8615964 -244640619 + HAL1 LINE L1 974 1739 -768 447 35 0 0 chr2 8616050 8616107 -244640476 + (TG)n Simple_repeat Simple_repeat 2 58 0 287 167 0 0 chr2 8616121 8616163 -244640420 - MER41A-int LTR ERV1 -5904 42 1 962 105 13 7 chr2 8616163 8616316 -244640267 - MER41A LTR ERV1 0 554 401 1741 108 105 21 chr2 8616853 8617139 -244639444 + AluSx SINE Alu 3 312 0 208 369 35 35 chr2 8617371 8617512 -244639071 - MIR3 SINE MIR -16 192 52 289 250 117 17 chr2 8617640 8617760 -244638823 + L2 LINE L2 1303 1434 -1880 321 47 0 0 chr2 8617966 8618009 -244638574 + (CA)n Simple_repeat Simple_repeat 2 44 0 324 261 82 89 chr2 8618515 8618795 -244637788 + L2 LINE L2 2839 3116 -156 337 282 85 82 chr2 8620463 8620757 -244635826 - L2 LINE L2 -108 3205 2911 274 209 14 0 chr2 8621847 8621986 -244634597 + (TG)n Simple_repeat Simple_repeat 1 141 0 319 165 0 21 chr2 8622053 8622150 -244634433 + (TG)n Simple_repeat Simple_repeat 1 95 0 237 65 0 0 chr2 8622151 8622182 -244634401 + (GGGAGA)n Simple_repeat Simple_repeat 3 33 0 914 160 0 41 chr2 8624042 8624211 -244632372 + AluJb SINE Alu 135 296 -16 448 292 39 28 chr2 8624742 8624897 -244631686 + MIR SINE MIR 15 171 -57 1107 160 62 29 chr2 8627116 8627462 -244629121 - MLT1D LTR MaLR -103 402 1 280 261 23 11 chr2 8628565 8628653 -244627930 + MIR SINE MIR 58 146 -116 1530 218 92 23 chr2 8629870 8630306 -244626277 - MLT1C LTR MaLR 0 467 2 1826 160 7 0 chr2 8630549 8630842 -244625741 - AluJo SINE Alu -17 295 1 26 64 0 0 chr2 8630902 8630949 -244625634 + AT_rich Low_complexity Low_complexity 1 47 0 395 301 40 23 chr2 8631067 8631281 -244625302 + MIR SINE MIR 5 228 -34 226 116 58 35 chr2 8632788 8632874 -244623709 + (TATAA)n Simple_repeat Simple_repeat 5 92 0 436 213 24 6 chr2 8632893 8633062 -244623521 + GA-rich Low_complexity Low_complexity 1 172 0 1332 155 24 0 chr2 8635933 8636146 -244620437 + MER20 DNA MER1_type 1 218 -1 514 138 0 0 chr2 8638989 8639069 -244617514 - MLT2B2 LTR ERVL -435 80 1 336 247 21 21 chr2 8639327 8639420 -244617163 + MER115 DNA AcHobo 7 99 -594 1831 184 49 16 chr2 8639439 8639808 -244616775 + MLT1B LTR MaLR 2 382 -8 546 293 105 16 chr2 8639825 8640129 -244616454 + MER115 DNA AcHobo 125 455 -238 22 0 0 0 chr2 8640664 8640686 -244615897 + GC_rich Low_complexity Low_complexity 1 22 0 959 217 27 5 chr2 8641100 8641321 -244615262 + MER52C-int LTR ERV1 2501 2726 -2491 685 201 28 14 chr2 8641367 8641511 -244615072 + MER52C-int LTR ERV1 4545 4690 -1256 293 119 0 0 chr2 8641516 8641558 -244615025 + MER52C-int LTR ERV1 5976 6017 -1188 457 107 57 4 chr2 8641562 8641700 -244614883 + MER52C-int LTR ERV1 6892 7091 0 3660 190 170 18 chr2 8642243 8643174 -244613409 + MER52C LTR ERV1 49 1278 0 254 260 110 0 chr2 8643624 8643724 -244612859 + MLT1H1 LTR MaLR 30 140 -415 198 150 0 0 chr2 8644303 8644343 -244612240 + (TA)n Simple_repeat Simple_repeat 2 41 0 311 276 45 70 chr2 8644345 8644501 -244612082 + L1MCa LINE L1 1922 2073 -4353 * 329 287 25 57 chr2 8644491 8644613 -244611970 + L1MC4 LINE L1 6586 6703 -1339 323 261 23 23 chr2 8644615 8644703 -244611880 + L1MCa LINE L1 1980 2067 -4359 186 200 42 21 chr2 8644703 8644798 -244611785 + (TA)n Simple_repeat Simple_repeat 1 97 0 330 318 24 0 chr2 8644803 8644888 -244611695 - L1MC4 LINE L1 -1340 6702 6616 308 315 0 22 chr2 8644921 8645013 -244611570 + L1MC4 LINE L1 6614 6703 -1339 220 221 16 49 chr2 8645013 8645135 -244611448 + (TATATG)n Simple_repeat Simple_repeat 6 123 0 308 296 48 64 chr2 8645135 8645260 -244611323 - L1MC4 LINE L1 -1339 6703 6581 216 0 0 0 chr2 8645290 8645314 -244611269 + (CA)n Simple_repeat Simple_repeat 1 24 0 647 184 16 68 chr2 8646384 8646528 -244610055 + MER96B DNA MER1_type? 1 134 -283 2990 115 29 2 chr2 8646528 8646972 -244609611 + L1PA16 LINE L1 5708 6163 -3 647 184 16 68 chr2 8646972 8647017 -244609566 + MER96B DNA MER1_type? 134 180 -237 1735 175 52 50 chr2 8647125 8647337 -244609246 - MSTB1 LTR MaLR 0 432 217 1850 168 3 0 chr2 8647337 8647647 -244608936 + AluJb SINE Alu 2 312 0 1735 175 52 50 chr2 8647647 8647834 -244608749 - MSTB1 LTR MaLR -215 217 32 197 275 12 117 chr2 8649450 8649621 -244606962 + MIR SINE MIR 110 262 0 1679 176 14 3 chr2 8649669 8649959 -244606624 + AluJo SINE Alu 1 293 -19 186 258 113 41 chr2 8650278 8650375 -244606208 - L3 LINE CR1 -106 1471 1368 1657 145 7 56 chr2 8651733 8652036 -244604547 + AluJo SINE Alu 1 288 -24 232 221 81 23 chr2 8652177 8652263 -244604320 - L2 LINE L2 0 3272 3182 207 69 0 0 chr2 8652312 8652341 -244604242 + (CCCCCA)n Simple_repeat Simple_repeat 4 32 0 682 197 55 0 chr2 8653648 8653775 -244602808 + FRAM SINE Alu 21 154 -22 205 352 63 0 chr2 8654868 8655010 -244601573 - MER5A DNA MER1_type -14 175 25 249 306 107 68 chr2 8655100 8655437 -244601146 - L2 LINE L2 -95 3177 2828 2412 82 0 0 chr2 8655766 8656058 -244600525 - AluSg SINE Alu -18 292 1 980 144 0 0 chr2 8657278 8657424 -244599159 - AluSg/x SINE Alu -8 302 157 243 296 12 25 chr2 8658369 8658450 -244598133 - MER5A DNA MER1_type 0 189 110 182 259 12 49 chr2 8658396 8658451 -244598132 + MER5A DNA MER1_type 40 93 -96 * 2149 117 23 47 chr2 8658451 8658835 -244597748 - THE1C LTR MaLR 0 375 1 182 259 12 49 chr2 8658835 8658860 -244597723 + MER5A DNA MER1_type 93 117 -72 221 291 46 106 chr2 8658866 8659017 -244597566 - MER5A DNA MER1_type -1 188 47 915 161 0 13 chr2 8659570 8659725 -244596858 + FRAM SINE Alu 24 176 0 2390 69 0 23 chr2 8660037 8660342 -244596241 + AluY SINE Alu 1 298 -13 1596 115 28 45 chr2 8660621 8660864 -244595719 + L1MB3 LINE L1 5892 6138 -45 1788 101 97 4 chr2 8660864 8661122 -244595461 + AluSg SINE Alu 1 282 -28 279 0 0 0 chr2 8661122 8661153 -244595430 + (CA)n Simple_repeat Simple_repeat 2 32 0 1596 115 28 45 chr2 8661153 8661196 -244595387 + L1MB3 LINE L1 6136 6174 -9 434 289 106 41 chr2 8661975 8662445 -244594138 - L1ME3A LINE L1 -217 5953 5450 1157 298 73 28 chr2 8662542 8663009 -244593574 + L2 LINE L2 2826 3313 0 1050 167 5 5 chr2 8663012 8663677 -244592906 + (TGGA)n Simple_repeat Simple_repeat 1 665 0 496 183 17 26 chr2 8664404 8664519 -244592064 + MLT1J1 LTR MaLR 7 120 -326 795 148 11 82 chr2 8664520 8664703 -244591880 + MER20 DNA MER1_type 1 170 -49 507 295 122 24 chr2 8664819 8665114 -244591469 + MLT1J2 LTR MaLR 113 436 -14 260 190 110 70 chr2 8665612 8665712 -244590871 - MER53 DNA DNA -84 105 2 357 273 123 27 chr2 8665714 8665901 -244590682 - MIR SINE MIR -13 249 45 283 376 23 23 chr2 8666241 8666414 -244590169 + MIR SINE MIR 18 190 -72 2003 145 16 10 chr2 8667317 8667448 -244589135 + AluJb SINE Alu 1 130 -182 1903 158 14 3 chr2 8667448 8667740 -244588843 + AluJb SINE Alu 1 295 -17 2003 145 16 10 chr2 8667740 8667911 -244588672 + AluJb SINE Alu 130 305 -7 298 249 107 47 chr2 8668223 8668392 -244588191 - MLT1G LTR MaLR -196 394 216 4057 187 83 71 chr2 8668394 8669940 -244586643 + L1MDa LINE L1 324 2126 -4414 1694 125 21 127 chr2 8669972 8670349 -244586234 + MER1B DNA MER1_type 1 337 0 482 249 71 24 chr2 8670466 8670635 -244585948 + MER5A DNA MER1_type 7 183 -6 232 309 0 64 chr2 8673706 8673816 -244582767 + C-rich Low_complexity Low_complexity 3 105 0 267 31 0 0 chr2 8674070 8674102 -244582481 + (CCG)n Simple_repeat Simple_repeat 2 33 0 399 297 0 14 chr2 8676737 8676882 -244579701 + C-rich Low_complexity Low_complexity 2 144 0 225 0 0 0 chr2 8677834 8677859 -244578724 + (A)n Simple_repeat Simple_repeat 1 25 0 23 0 0 0 chr2 8679190 8679213 -244577370 + AT_rich Low_complexity Low_complexity 1 23 0 460 275 66 42 chr2 8681477 8681931 -244574652 - L1M4 LINE L1 -2043 4103 3639 2033 121 29 0 chr2 8682402 8682682 -244573901 + AluJb SINE Alu 1 288 -24 26 30 0 0 chr2 8682683 8682716 -244573867 + AT_rich Low_complexity Low_complexity 1 33 0 1434 308 67 40 chr2 8682801 8683780 -244572803 + L1MEd LINE L1 112 1117 -5002 1891 134 10 23 chr2 8683914 8684213 -244572370 - AluJb SINE Alu -17 295 1 1829 277 71 13 chr2 8684225 8684973 -244571610 + L1MC4a LINE L1 5279 6069 -1739 1775 143 3 28 chr2 8685113 8685399 -244571184 + AluSx SINE Alu 1 279 -33 326 281 45 0 chr2 8685414 8685503 -244571080 - L1MC5 LINE L1 -861 7100 7008 862 290 86 28 chr2 8685601 8686145 -244570438 + L1MC4a LINE L1 6199 6774 -1034 309 259 46 15 chr2 8686173 8686304 -244570279 + L1MC5 LINE L1 6957 7091 -870 311 319 91 55 chr2 8686537 8686844 -244569739 + L1MC5 LINE L1 7249 7566 -395 243 0 0 0 chr2 8686858 8686885 -244569698 + (T)n Simple_repeat Simple_repeat 1 27 0 255 239 11 54 chr2 8686964 8687056 -244569527 + L1MC5 LINE L1 7711 7798 -163 368 309 95 8 chr2 8688216 8688342 -244568241 - L2 LINE L2 0 3272 3136 355 237 200 4 chr2 8688722 8688967 -244567616 + LTR50 LTR ERVL 502 794 -1 405 300 0 0 chr2 8689108 8689268 -244567315 + G-rich Low_complexity Low_complexity 1 160 0 315 142 122 0 chr2 8689369 8689517 -244567066 + (GGATG)n Simple_repeat Simple_repeat 2 167 0 311 164 41 0 chr2 8689520 8689593 -244566990 + GA-rich Low_complexity Low_complexity 1 76 0 2042 138 0 0 chr2 8690071 8690388 -244566195 + AluSx SINE Alu 1 317 0 639 301 109 12 chr2 8690711 8691040 -244565543 - L1MC/D LINE L1 -2073 5735 5375 222 62 0 0 chr2 8691054 8691086 -244565497 + (TTTTG)n Simple_repeat Simple_repeat 2 33 0 251 237 30 69 chr2 8691535 8691666 -244564917 - L1MC4a LINE L1 -1634 6174 6049 794 197 72 0 chr2 8691716 8691868 -244564715 + AluJb SINE Alu 136 298 -14 214 304 124 19 chr2 8692020 8692181 -244564402 + L3 LINE CR1 1320 1497 -80 1608 108 0 0 chr2 8692825 8693028 -244563555 + AluSx SINE Alu 1 203 -109 1026 172 10 25 chr2 8693029 8693233 -244563350 + MLT1B LTR MaLR 189 389 -1 237 65 0 0 chr2 8693396 8693427 -244563156 + (CA)n Simple_repeat Simple_repeat 1 31 0 22 56 0 0 chr2 8694284 8694320 -244562263 + AT_rich Low_complexity Low_complexity 1 36 0 328 104 30 0 chr2 8696259 8696326 -244560257 + (TG)n Simple_repeat Simple_repeat 1 69 0 328 128 46 18 chr2 8696373 8696482 -244560101 + (TG)n Simple_repeat Simple_repeat 1 112 0 436 122 68 7 chr2 8696509 8696656 -244559927 + (TG)n Simple_repeat Simple_repeat 1 156 0 349 307 55 24 chr2 8696856 8696983 -244559600 - L2 LINE L2 -474 2840 2710 532 113 0 0 chr2 8697178 8697258 -244559325 + MADE1 DNA Mariner 1 80 0 2017 113 72 0 chr2 8697668 8697959 -244558624 - AluSx SINE Alu 0 312 1 2421 97 3 0 chr2 8698239 8698547 -244558036 + AluSp SINE Alu 1 309 -4 1795 148 56 14 chr2 8698615 8698899 -244557684 + AluJb SINE Alu 1 296 -16 1640 223 122 26 chr2 8699557 8700018 -244556565 + MLT1D LTR MaLR 1 505 0 1470 207 122 3 chr2 8700440 8700595 -244555988 - MSTD LTR MaLR -2 394 259 2233 113 159 5 chr2 8700595 8700966 -244555617 + MSTA LTR MaLR 1 428 0 1470 207 122 3 chr2 8700966 8701162 -244555421 - MSTD LTR MaLR -137 259 1 365 283 30 0 chr2 8701195 8701294 -244555289 + L2 LINE L2 3212 3313 0 282 316 29 76 chr2 8701294 8701465 -244555118 + L3 LINE CR1 1404 1566 -11 450 0 0 0 chr2 8701900 8701950 -244554633 + (TG)n Simple_repeat Simple_repeat 2 51 0 578 129 0 86 chr2 8701964 8702080 -244554503 - AluJ SINE Alu 0 312 207 997 136 0 7 chr2 8702080 8702220 -244554363 - AluJ SINE Alu -169 143 5 395 174 250 45 chr2 8702229 8702361 -244554222 - MLT1F LTR MaLR -383 159 1 216 176 44 0 chr2 8702980 8703048 -244553535 + (TTATA)n Simple_repeat Simple_repeat 5 75 0 2298 53 0 0 chr2 8703141 8703406 -244553177 - AluY SINE Alu -16 295 31 361 271 68 23 chr2 8704849 8704980 -244551603 + MLT1G3 LTR MaLR 26 162 -433 1583 148 5 77 chr2 8704980 8705352 -244551231 - MER4A LTR ERV1 0 664 261 634 128 20 10 chr2 8705349 8705451 -244551132 - MER4A LTR ERV1 -561 103 1 * 521 260 83 76 chr2 8705463 8705881 -244550702 + MLT1G3 LTR MaLR 92 560 -7 2161 204 99 159 chr2 8705929 8706006 -244550577 - Charlie2a DNA MER1_type -6 2856 2776 5335 84 0 15 chr2 8706006 8706676 -244549907 - PABL_A LTR ERV1 0 660 1 2161 204 99 159 chr2 8706676 8707878 -244548705 - Charlie2a DNA MER1_type -86 2776 1673 2037 122 6 34 chr2 8707878 8708198 -244548385 + AluSx SINE Alu 1 311 -1 2161 204 99 159 chr2 8708198 8708375 -244548208 - Charlie2a DNA MER1_type -1189 1673 1487 430 264 227 5 chr2 8708498 8708714 -244547869 - Charlie2a DNA MER1_type -2239 623 360 886 303 130 35 chr2 8709135 8709963 -244546620 - HAL1 LINE L1 0 2507 1601 2533 171 11 18 chr2 8709982 8710437 -244546146 + LOR1b LTR ERV1 10 461 0 2147 252 65 70 chr2 8710439 8710557 -244546026 - HAL1 LINE L1 -916 1591 1474 2111 123 0 3 chr2 8710557 8710872 -244545711 - AluSx SINE Alu 0 314 1 2147 252 65 70 chr2 8710872 8711817 -244544766 - HAL1 LINE L1 -1033 1474 532 342 293 77 90 chr2 8711862 8712241 -244544342 - HAL1 LINE L1 -2044 463 90 463 256 76 33 chr2 8715022 8715233 -244541350 + L1ME3A LINE L1 5727 5946 -224 2425 65 3 0 chr2 8715248 8715539 -244541044 + AluSg SINE Alu 5 296 -14 2497 116 42 11 chr2 8715598 8715951 -244540632 + THE1B LTR MaLR 1 364 0 2118 105 0 36 chr2 8716007 8716311 -244540272 - AluSx SINE Alu -19 293 1 1433 244 31 0 chr2 8716398 8716758 -244539825 - ERVL LTR ERVL -4525 1239 869 1298 241 26 42 chr2 8716854 8717278 -244539305 - MLT2B1 LTR ERVL -103 417 1 1758 156 42 10 chr2 8717363 8717652 -244538931 + AluJo SINE Alu 1 298 -14 23 54 0 0 chr2 8718051 8718088 -244538495 + AT_rich Low_complexity Low_complexity 1 37 0 2779 101 11 16 chr2 8718317 8718694 -244537889 + THE1C LTR MaLR 1 375 0 1014 224 68 87 chr2 8719183 8719598 -244536985 - L1M4 LINE L1 -1022 5124 4718 36 40 0 0 chr2 8719699 8719749 -244536834 + AT_rich Low_complexity Low_complexity 1 50 0 285 239 23 23 chr2 8719846 8719934 -244536649 + L2 LINE L2 1468 1555 -1759 2628 170 19 46 chr2 8720012 8720496 -244536087 + MLT2B2 LTR ERVL 1 472 -43 201 74 0 0 chr2 8720496 8720523 -244536060 + (TCTG)n Simple_repeat Simple_repeat 2 28 0 2628 170 19 46 chr2 8720523 8720555 -244536028 + MLT2B2 LTR ERVL 472 503 -12 21 57 0 0 chr2 8720646 8720681 -244535902 + AT_rich Low_complexity Low_complexity 1 35 0 1730 168 0 14 chr2 8720687 8720978 -244535605 - AluJo SINE Alu -15 297 11 1171 123 12 0 chr2 8721741 8721911 -244534672 + AluSg/x SINE Alu 135 306 -4 351 44 0 0 chr2 8722616 8722661 -244533922 + (CA)n Simple_repeat Simple_repeat 2 46 0 260 321 87 38 chr2 8723033 8723217 -244533366 + MIR SINE MIR 14 206 -56 * 543 291 35 0 chr2 8723216 8723357 -244533226 + MIR SINE MIR 97 242 -20 24 53 0 0 chr2 8723556 8723594 -244532989 + AT_rich Low_complexity Low_complexity 1 38 0 225 65 0 0 chr2 8724007 8724038 -244532545 + (ATG)n Simple_repeat Simple_repeat 2 32 0 832 221 106 10 chr2 8724131 8724339 -244532244 + MIR SINE MIR 17 244 -18 334 252 92 25 chr2 8724582 8724701 -244531882 - MER104 DNA Tc2 -49 131 5 22 0 0 0 chr2 8725031 8725053 -244531530 + AT_rich Low_complexity Low_complexity 1 22 0 560 194 0 37 chr2 8725175 8725283 -244531300 + FRAM SINE Alu 38 141 -35 351 195 172 94 chr2 8725527 8725783 -244530800 + MLT1J2 LTR MaLR 2 277 -173 295 248 77 3 chr2 8725831 8725930 -244530653 + MLT1J2 LTR MaLR 345 444 -2 923 131 0 8 chr2 8726377 8726507 -244530076 - FLAM_A SINE Alu -4 129 1 2092 119 3 0 chr2 8726686 8726971 -244529612 - AluSx SINE Alu -24 288 3 1873 161 0 17 chr2 8727059 8727357 -244529226 - AluJb SINE Alu -19 293 1 1695 192 77 0 chr2 8728957 8729280 -244527303 - MER7A DNA MER2_type 0 346 1 1645 132 73 11 chr2 8730486 8730790 -244525793 + AluJo SINE Alu 1 312 0 21 0 0 0 chr2 8734420 8734441 -244522142 + AT_rich Low_complexity Low_complexity 1 21 0 800 197 8 0 chr2 8734689 8734821 -244521762 - FLAM_A SINE Alu 0 133 1 246 255 88 74 chr2 8735550 8735766 -244520817 + L2 LINE L2 3030 3248 -65 1134 192 148 36 chr2 8736441 8736800 -244519783 - MER31B LTR ERV1 -43 423 25 24 32 0 0 chr2 8736940 8736971 -244519612 + AT_rich Low_complexity Low_complexity 1 31 0 2177 121 0 3 chr2 8737675 8737982 -244518601 + AluSx SINE Alu 1 306 -6 483 145 38 0 chr2 8740319 8740415 -244516168 - L1MB8 LINE L1 -275 5899 5798 3564 206 75 11 chr2 8740520 8741374 -244515209 + L1MC4a LINE L1 6900 7808 0 1946 128 6 55 chr2 8743711 8744039 -244512544 + AluSx SINE Alu 1 312 0 1064 181 108 23 chr2 8744554 8744814 -244511769 - AluJo SINE Alu -20 292 11 310 239 163 0 chr2 8745154 8745246 -244511337 + L2 LINE L2 3203 3309 -4 238 247 161 0 chr2 8745880 8745973 -244510610 - MIR SINE MIR -76 186 79 217 195 35 23 chr2 8746479 8746566 -244510017 + (TTATA)n Simple_repeat Simple_repeat 5 92 0 1071 269 143 18 chr2 8747327 8747725 -244508858 - L2 LINE L2 -18 3295 2848 3373 135 67 24 chr2 8748068 8748653 -244507930 + MER4B LTR ERV1 1 610 0 459 33 33 0 chr2 8749663 8749723 -244506860 + AluY SINE Alu 2 63 -250 24 32 0 0 chr2 8749824 8749855 -244506728 + AT_rich Low_complexity Low_complexity 1 31 0 264 319 61 25 chr2 8751067 8751230 -244505353 + L2 LINE L2 2905 3073 -240 1778 286 161 21 chr2 8751544 8752572 -244504011 + L2 LINE L2 191 1362 -1952 278 271 84 60 chr2 8753611 8753862 -244502721 - L2 LINE L2 -920 2394 2138 254 309 40 46 chr2 8753862 8754014 -244502569 + L2 LINE L2 3132 3282 -31 182 233 209 23 chr2 8754045 8754174 -244502409 - L2 LINE L2 -1232 2082 1930 220 186 0 93 chr2 8754304 8754401 -244502182 + GA-rich Low_complexity Low_complexity 5 92 0 2288 92 17 0 chr2 8755775 8756067 -244500516 + AluSx SINE Alu 1 297 -15 316 180 0 0 chr2 8756591 8756652 -244499931 - L1ME4a LINE L1 -1 6120 6060 21 0 0 0 chr2 8756703 8756724 -244499859 + AT_rich Low_complexity Low_complexity 1 21 0 2101 141 0 0 chr2 8756724 8757030 -244499553 + AluSx SINE Alu 1 306 -6 1100 169 0 0 chr2 8757561 8757744 -244498839 - AluJb SINE Alu -10 302 120 410 289 86 119 chr2 8758055 8759029 -244497554 + L2 LINE L2 880 1821 -1493 2098 104 0 0 chr2 8759062 8759367 -244497216 + AluSx SINE Alu 5 309 0 209 262 12 83 chr2 8759391 8759475 -244497108 + L2 LINE L2 1938 2015 -1299 892 226 34 26 chr2 8759485 8759719 -244496864 + MER106A DNA MER1_type 1 236 0 490 265 149 16 chr2 8759721 8760042 -244496541 - L1MC5 LINE L1 -99 7862 7499 1671 121 148 4 chr2 8760360 8760616 -244495967 - AluJb SINE Alu -5 297 5 495 353 154 12 chr2 8760695 8761299 -244495284 + L2 LINE L2 2167 2856 -458 344 348 167 30 chr2 8761328 8761633 -244494950 + L2 LINE L2 2926 3272 0 2136 86 17 7 chr2 8763295 8763585 -244492998 + AluSq SINE Alu 1 293 -20 352 43 0 0 chr2 8763769 8763816 -244492767 - AluY SINE Alu -3 298 252 2365 86 0 10 chr2 8763882 8764184 -244492399 - AluSq SINE Alu -14 299 1 231 133 0 0 chr2 8764223 8764268 -244492315 + (T)n Simple_repeat Simple_repeat 1 45 0 198 0 0 0 chr2 8764297 8764319 -244492264 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 21 0 0 0 chr2 8765621 8765642 -244490941 + AT_rich Low_complexity Low_complexity 1 21 0 188 132 151 38 chr2 8766073 8766126 -244490457 - MIR SINE MIR -24 238 180 1315 172 0 5 chr2 8767199 8767420 -244489163 + AluJb SINE Alu 85 304 -8 447 290 189 64 chr2 8768542 8768793 -244487790 - L2 LINE L2 -337 2977 2759 1902 124 57 0 chr2 8768793 8769076 -244487507 - AluJb SINE Alu -13 299 1 447 290 189 64 chr2 8769076 8769824 -244486759 - L2 LINE L2 -555 2759 1853 25 0 0 0 chr2 8773078 8773103 -244483480 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr2 8773916 8773939 -244482644 + AT_rich Low_complexity Low_complexity 1 23 0 208 379 32 0 chr2 8774439 8774534 -244482049 - MIR SINE MIR -69 139 42 252 0 0 0 chr2 8775458 8775486 -244481097 + (CA)n Simple_repeat Simple_repeat 2 29 0 966 108 0 0 chr2 8775692 8775822 -244480761 - AluSg/x SINE Alu -4 306 177 284 327 9 47 chr2 8775884 8775991 -244480592 - MIR SINE MIR -82 126 24 21 0 0 0 chr2 8778064 8778085 -244478498 + AT_rich Low_complexity Low_complexity 1 21 0 2245 80 0 30 chr2 8778090 8778389 -244478194 + AluSg1 SINE Alu 1 290 -19 379 186 46 56 chr2 8779011 8779134 -244477449 + L1ME LINE L1 5479 5595 -571 230 248 113 68 chr2 8779142 8779275 -244477308 + L1MC4 LINE L1 7903 8041 -1 21 0 0 0 chr2 8781231 8781252 -244475331 + AT_rich Low_complexity Low_complexity 1 21 0 1470 163 21 21 chr2 8782677 8782959 -244473624 - AluJo SINE Alu -30 282 1 1826 143 17 24 chr2 8784615 8784909 -244471674 - AluJb SINE Alu -20 292 1 1692 163 0 14 chr2 8785918 8786194 -244470389 - AluJo SINE Alu -40 272 1 245 339 46 9 chr2 8786387 8786496 -244470087 + L2 LINE L2 3190 3302 -11 21 36 0 0 chr2 8786513 8786541 -244470042 + AT_rich Low_complexity Low_complexity 1 28 0 545 306 75 0 chr2 8788354 8788540 -244468043 + MLT1J LTR MaLR 3 202 -309 518 269 35 29 chr2 8788531 8788702 -244467881 + MLT1J LTR MaLR 340 511 0 * 28 0 0 0 chr2 8788879 8788907 -244467676 + AT_rich Low_complexity Low_complexity 1 28 0 214 292 112 50 chr2 8789100 8789261 -244467322 - MIR SINE MIR -46 216 46 819 266 71 9 chr2 8789864 8790090 -244466493 + MIR SINE MIR 23 262 0 244 200 29 29 chr2 8790280 8790350 -244466233 + GA-rich Low_complexity Low_complexity 4 73 0 778 278 158 11 chr2 8791126 8791627 -244464956 - L2 LINE L2 0 3313 2734 25 31 0 0 chr2 8792938 8792970 -244463613 + AT_rich Low_complexity Low_complexity 1 32 0 437 261 69 0 chr2 8793283 8793413 -244463170 - L2 LINE L2 -15 3298 3160 433 282 115 6 chr2 8793452 8793626 -244462957 + L1ME LINE L1 5586 5778 -343 1641 112 0 60 chr2 8793706 8793956 -244462627 + AluSq SINE Alu 1 235 -78 225 0 0 0 chr2 8793963 8793988 -244462595 + (A)n Simple_repeat Simple_repeat 1 25 0 304 155 0 71 chr2 8794027 8794111 -244462472 + L1ME4a LINE L1 6044 6121 0 238 301 48 10 chr2 8794376 8794479 -244462104 - L1MEd LINE L1 -5996 123 17 3237 136 39 0 chr2 8794758 8795274 -244461309 + Tigger4(Zombi) DNA MER2_type 2196 2731 0 3010 182 56 2 chr2 8795658 8796191 -244460392 + MER68 LTR ERV1 1 562 0 848 67 55 0 chr2 8797356 8797487 -244459096 - LTR12 LTR ERV1 -21 693 270 5022 107 44 92 chr2 8797488 8798465 -244458118 - pTR5 LTR ERV1 -1 2605 1520 3411 95 4 32 chr2 8798462 8798679 -244457904 - HERV9 LTR ERV1 -164 8235 8013 * 2523 62 0 7 chr2 8798679 8798983 -244457600 + AluY SINE Alu 1 302 -9 3411 95 4 32 chr2 8798983 8799259 -244457324 - HERV9 LTR ERV1 -386 8013 7756 2159 182 154 50 chr2 8799253 8800051 -244456532 - HERV9 LTR ERV1 -5176 1720 840 * 30034 112 12 15 chr2 8800050 8805019 -244451564 - HERV9 LTR ERV1 -3212 5045 66 5170 80 50 134 chr2 8805019 8805974 -244450609 - pTR5 LTR ERV1 0 2606 1520 1929 133 32 19 chr2 8806689 8806997 -244449586 - AluSx SINE Alu 0 312 1 2133 143 3 0 chr2 8807027 8807334 -244449249 - AluJb SINE Alu -4 308 1 408 329 62 21 chr2 8807334 8807574 -244449009 - L1M4 LINE L1 -1599 4547 4298 1020 73 0 7 chr2 8808184 8808320 -244448263 + L1PA6 LINE L1 5799 5933 -221 207 114 0 0 chr2 8811180 8811215 -244445368 + (T)n Simple_repeat Simple_repeat 1 35 0 1736 112 4 0 chr2 8811701 8811933 -244444650 - AluSx SINE Alu -79 233 1 1554 194 18 3 chr2 8811959 8812243 -244444340 - AluJb SINE Alu -22 290 3 24 0 0 0 chr2 8812245 8812269 -244444314 + AT_rich Low_complexity Low_complexity 1 24 0 246 250 33 43 chr2 8812468 8812560 -244444023 - MIR SINE MIR -123 139 49 309 200 0 0 chr2 8812927 8812982 -244443601 - MER116 DNA Mariner -9 71 17 1167 241 43 26 chr2 8813068 8813512 -244443071 + L1ME1 LINE L1 5723 6332 -2 21 0 0 0 chr2 8813916 8813937 -244442646 + AT_rich Low_complexity Low_complexity 1 21 0 466 320 47 78 chr2 8815122 8815441 -244441142 + L2 LINE L2 2963 3271 -1 3668 219 58 12 chr2 8815555 8816423 -244440160 - L1M4 LINE L1 -1136 5010 4093 1584 196 38 35 chr2 8816423 8816796 -244439787 - MLT1A2 LTR MaLR 0 374 1 3668 219 58 12 chr2 8816796 8816877 -244439706 - L1M4 LINE L1 -2053 4093 4017 2313 101 0 0 chr2 8817786 8818092 -244438491 - AluSq SINE Alu -7 306 1 1043 230 4 4 chr2 8818402 8818680 -244437903 - L1M4 LINE L1 -2909 3237 2960 397 272 99 8 chr2 8819750 8819937 -244436646 - MIR SINE MIR -19 243 38 2509 67 0 6 chr2 8822385 8822697 -244433886 + AluY SINE Alu 1 310 -1 285 245 38 57 chr2 8823189 8823211 -244433372 + MIR SINE MIR 159 180 -82 1251 124 129 0 chr2 8823211 8823420 -244433163 - MER46A DNA MER2_type 0 236 1 285 245 38 57 chr2 8823420 8823503 -244433080 + MIR SINE MIR 180 262 0 209 220 40 0 chr2 8823511 8823561 -244433022 + L2 LINE L2 3261 3312 -1 3853 132 3 2 chr2 8823723 8824330 -244432253 + L1PB3 LINE L1 5545 6152 -2 198 267 173 40 chr2 8824514 8824589 -244431994 - L2 LINE L2 -6 3266 3182 195 342 127 50 chr2 8824721 8825084 -244431499 - L2 LINE L2 -1 3312 2922 980 199 6 0 chr2 8825626 8825797 -244430786 - FAM SINE Alu -3 172 1 875 271 104 56 chr2 8825840 8826579 -244430004 + L2 LINE L2 2545 3313 0 22 56 0 0 chr2 8827182 8827218 -244429365 + AT_rich Low_complexity Low_complexity 1 36 0 22 0 0 0 chr2 8828790 8828812 -244427771 + AT_rich Low_complexity Low_complexity 1 22 0 1754 172 0 7 chr2 8830051 8830342 -244426241 + AluJo SINE Alu 1 289 -23 23 33 0 0 chr2 8830342 8830372 -244426211 + AT_rich Low_complexity Low_complexity 1 30 0 252 137 0 0 chr2 8831608 8831659 -244424924 + (TA)n Simple_repeat Simple_repeat 1 51 0 2136 121 7 0 chr2 8832123 8832421 -244424162 + AluSx SINE Alu 1 300 -12 723 195 0 8 chr2 8833424 8833547 -244423036 - FLAM_A SINE Alu -11 122 1 2818 3 0 0 chr2 8833696 8833998 -244422585 + AluYa5 SINE Alu 1 302 -9 777 223 42 0 chr2 8834461 8834654 -244421929 - MER20 DNA MER1_type -2 217 17 332 264 114 36 chr2 8834685 8834852 -244421731 - L2 LINE L2 -78 3235 3056 * 2612 291 128 31 chr2 8834847 8836509 -244420074 - L2 LINE L2 -448 2866 1043 2191 119 3 0 chr2 8837568 8837870 -244418713 - AluSx SINE Alu -9 303 1 350 287 144 23 chr2 8837874 8838048 -244418535 + L2 LINE L2 2823 3017 -296 3383 279 106 28 chr2 8838066 8838123 -244418460 - L2 LINE L2 -38 3275 3224 2216 94 30 0 chr2 8838123 8838422 -244418161 + AluSg SINE Alu 2 309 -1 3383 279 106 28 chr2 8838422 8838470 -244418113 - L2 LINE L2 -89 3224 3181 200 59 29 0 chr2 8838470 8838504 -244418079 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 3383 279 106 28 chr2 8838504 8839918 -244416665 - L2 LINE L2 -132 3181 1637 381 257 46 28 chr2 8839987 8840096 -244416487 + L2 LINE L2 3203 3313 0 25 51 0 0 chr2 8840465 8840504 -244416079 + AT_rich Low_complexity Low_complexity 1 39 0 23 33 0 0 chr2 8840609 8840639 -244415944 + AT_rich Low_complexity Low_complexity 1 30 0 1588 174 18 21 chr2 8841415 8841697 -244414886 - AluJo SINE Alu -31 281 1 221 224 134 30 chr2 8842447 8842514 -244414069 + MER5B DNA MER1_type 2 75 -103 208 331 90 8 chr2 8844065 8844198 -244412385 - MIR SINE MIR -33 229 86 271 191 0 73 chr2 8844515 8844583 -244412000 + L1MC1 LINE L1 7 69 -6357 9188 198 63 29 chr2 8844583 8844604 -244411979 + L1MC1 LINE L1 2001 2020 -4593 352 51 34 0 chr2 8844604 8844663 -244411920 + (TG)n Simple_repeat Simple_repeat 2 62 0 9188 198 63 29 chr2 8844663 8845937 -244410646 + L1MC1 LINE L1 2020 3249 -3364 1917 145 30 3 chr2 8845937 8846241 -244410342 + AluJb SINE Alu 1 312 0 9188 198 63 29 chr2 8846241 8847009 -244409574 + L1MC1 LINE L1 3249 3989 -2624 2177 112 3 13 chr2 8847009 8847312 -244409271 + AluSq SINE Alu 1 300 -13 9188 198 63 29 chr2 8847312 8849680 -244406903 + L1MC1 LINE L1 3989 6593 -20 198 103 0 0 chr2 8849689 8849718 -244406865 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 1680 187 14 0 chr2 8851681 8851970 -244404613 - AluJb SINE Alu -19 293 1 275 240 264 8 chr2 8852373 8852502 -244404081 + MER103 DNA DNA 1 162 -4 2291 91 3 3 chr2 8852576 8852873 -244403710 - AluSq SINE Alu -16 297 1 24 0 0 0 chr2 8853474 8853498 -244403085 + AT_rich Low_complexity Low_complexity 1 24 0 2379 65 0 10 chr2 8853588 8853894 -244402689 - AluY SINE Alu -8 303 1 255 186 47 0 chr2 8855664 8855707 -244400876 + MER57A LTR ERV1 295 339 -64 615 173 43 81 chr2 8855773 8855958 -244400625 - MER104 DNA MER2_type -1 179 2 467 304 100 43 chr2 8856288 8856778 -244399805 + L1MC/D LINE L1 4859 5376 -770 231 139 47 0 chr2 8856778 8856821 -244399762 - U2 snRNA snRNA -143 45 1 614 252 145 16 chr2 8856845 8857087 -244399496 + L1MC/D LINE L1 5392 5664 -457 282 216 149 0 chr2 8857160 8857234 -244399349 + L1MC/D LINE L1 5678 5762 -2046 23 33 0 0 chr2 8857473 8857503 -244399080 + AT_rich Low_complexity Low_complexity 1 30 0 1615 155 53 8 chr2 8857530 8857794 -244398789 + AluJo SINE Alu 1 276 -36 1527 161 8 4 chr2 8857794 8858043 -244398540 - AluJo SINE Alu -62 250 1 433 198 10 30 chr2 8860720 8860821 -244395762 - AluJo SINE Alu -162 150 52 206 293 17 0 chr2 8861528 8861586 -244394997 + MIR SINE MIR 85 143 -65 923 183 6 23 chr2 8862188 8862363 -244394220 - FRAM SINE Alu -5 171 1 1125 321 130 19 chr2 8864386 8864549 -244392034 - L2 LINE L2 -37 3276 3132 1926 144 3 10 chr2 8864549 8864840 -244391743 + AluJb SINE Alu 1 289 -23 1125 321 130 19 chr2 8864840 8865584 -244390999 - L2 LINE L2 -181 3132 2251 722 197 8 0 chr2 8866654 8866781 -244389802 + FLAM_C SINE Alu 1 128 -5 25 65 0 0 chr2 8867542 8867588 -244388995 + AT_rich Low_complexity Low_complexity 1 46 0 2663 218 59 26 chr2 8867696 8868390 -244388193 - MER21B LTR ERV1 -49 814 98 226 225 11 101 chr2 8868509 8868598 -244387985 - MER21B LTR ERV1 -766 97 17 1635 191 38 0 chr2 8868605 8868920 -244387663 + MER7A DNA MER2_type 21 345 -1 25 0 0 0 chr2 8869310 8869335 -244387248 + AT_rich Low_complexity Low_complexity 1 25 0 1985 138 7 7 chr2 8869518 8869807 -244386776 - AluSx SINE Alu -23 289 1 327 271 97 32 chr2 8869978 8870133 -244386450 - MIR SINE MIR -48 214 50 856 171 14 47 chr2 8870319 8870530 -244386053 + MER3 DNA MER1_type 1 204 -5 2059 149 0 7 chr2 8870769 8871071 -244385512 + AluSx SINE Alu 4 303 -9 2150 113 0 14 chr2 8871927 8872247 -244384336 - AluSx SINE Alu 0 312 1 45 34 0 0 chr2 8872393 8872452 -244384131 + AT_rich Low_complexity Low_complexity 1 59 0 2307 92 7 0 chr2 8873430 8873725 -244382858 + AluSx SINE Alu 1 297 -15 489 228 0 35 chr2 8873889 8874034 -244382549 - L1ME3 LINE L1 -1 6161 6022 24 67 0 0 chr2 8874465 8874510 -244382073 + AT_rich Low_complexity Low_complexity 1 45 0 251 111 0 22 chr2 8874746 8874791 -244381792 + (GGAA)n Simple_repeat Simple_repeat 4 47 0 2280 97 0 16 chr2 8875856 8876166 -244380417 + AluSg SINE Alu 1 305 -5 1589 192 65 107 chr2 8876513 8877206 -244379377 + L1MC4a LINE L1 6840 7503 -305 2047 147 13 0 chr2 8877333 8877640 -244378943 + AluJb SINE Alu 1 311 -1 1865 128 0 4 chr2 8877640 8877905 -244378678 + AluSx SINE Alu 41 304 -8 503 351 26 22 chr2 8878488 8878719 -244377864 + MIR SINE MIR 5 236 -26 23 33 0 0 chr2 8879427 8879457 -244377126 + AT_rich Low_complexity Low_complexity 1 30 0 2178 107 3 3 chr2 8881756 8882047 -244374536 + AluSx SINE Alu 1 291 -21 266 248 198 66 chr2 8882504 8882625 -244373958 + L2 LINE L2 3136 3272 0 209 138 100 12 chr2 8883334 8883414 -244373169 + (TATAA)n Simple_repeat Simple_repeat 4 90 0 242 273 163 12 chr2 8883743 8883915 -244372668 + MLT1J LTR MaLR 314 511 0 320 222 58 125 chr2 8884450 8884554 -244372029 + MARNA DNA Mariner 91 200 -386 1865 142 16 32 chr2 8884554 8884863 -244371720 + AluJb SINE Alu 1 304 -8 320 222 58 125 chr2 8884863 8885069 -244371514 + MARNA DNA Mariner 200 380 -206 1615 164 82 0 chr2 8885186 8885467 -244371116 - AluJo SINE Alu -8 304 1 21 0 0 0 chr2 8885647 8885668 -244370915 + AT_rich Low_complexity Low_complexity 1 21 0 202 333 83 30 chr2 8886306 8886438 -244370145 + MIR SINE MIR 124 262 0 1762 168 7 3 chr2 8886614 8886917 -244369666 + AluJb SINE Alu 2 305 -7 2619 153 12 36 chr2 8886925 8887305 -244369278 + L1MB2 LINE L1 5681 6048 -123 2096 127 3 3 chr2 8887305 8887605 -244368978 + AluSx SINE Alu 1 300 -12 2619 153 12 36 chr2 8887605 8887726 -244368857 + L1MB2 LINE L1 6048 6170 -1 197 116 0 47 chr2 8887777 8887820 -244368763 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 2184 79 20 17 chr2 8888019 8888311 -244368272 + AluY SINE Alu 2 294 -17 2353 90 7 0 chr2 8888541 8888851 -244367732 + AluSp SINE Alu 1 312 -1 194 135 27 0 chr2 8889139 8889176 -244367407 + L2 LINE L2 3273 3310 -3 883 237 53 40 chr2 8889558 8889879 -244366704 + L2 LINE L2 2333 2657 -657 913 99 46 7 chr2 8889883 8890035 -244366548 + L1MA7 LINE L1 6128 6285 -6 707 233 45 11 chr2 8890047 8890223 -244366360 - MER5A DNA MER1_type -6 183 2 435 324 97 29 chr2 8890223 8890705 -244365878 + L2 LINE L2 2709 3225 -88 763 236 68 8 chr2 8890711 8890948 -244365635 + L1ME1 LINE L1 4923 5173 -973 939 261 40 40 chr2 8890960 8891285 -244365298 + MLT1-int LTR MaLR 1046 1370 -1 928 243 41 4 chr2 8891285 8891540 -244365043 + L1ME1 LINE L1 5895 6159 -7 270 174 0 0 chr2 8891554 8891600 -244364983 + LTR56 LTR ERV1 349 394 -51 445 224 220 22 chr2 8891613 8891965 -244364618 + L1ME4a LINE L1 5601 6049 -72 2248 118 0 0 chr2 8892635 8892931 -244363652 - AluJb SINE Alu -16 296 1 208 340 10 10 chr2 8893160 8893263 -244363320 + L2 LINE L2 2594 2696 -618 1375 167 19 55 chr2 8893670 8893982 -244362601 - L1MA4 LINE L1 -3 6297 5997 205 283 50 0 chr2 8894039 8894099 -244362484 + MIR SINE MIR 197 259 -3 23 78 0 0 chr2 8894218 8894269 -244362314 + AT_rich Low_complexity Low_complexity 1 51 0 371 365 54 12 chr2 8894270 8894437 -244362146 + L2 LINE L2 3098 3271 -1 612 262 57 94 chr2 8894945 8895468 -244361115 + L2 LINE L2 2673 3312 -1 242 0 61 0 chr2 8895578 8895611 -244360972 + (TATG)n Simple_repeat Simple_repeat 2 36 0 1770 156 3 27 chr2 8895618 8895919 -244360664 - AluJo SINE Alu -18 294 1 207 324 28 0 chr2 8895940 8896011 -244360572 + L2 LINE L2 3223 3295 -18 657 82 0 10 chr2 8896355 8896453 -244360130 + AluJb SINE Alu 209 305 -7 562 242 24 30 chr2 8897192 8897357 -244359226 - MER5A DNA MER1_type 0 189 26 205 308 51 13 chr2 8897511 8897589 -244358994 + MER5A DNA MER1_type 70 150 -39 180 121 15 61 chr2 8898435 8898501 -244358082 + (CGGGG)n Simple_repeat Simple_repeat 1 63 0 1683 139 3 86 chr2 8898949 8899276 -244357307 + AluJo SINE Alu 5 306 0 2410 117 5 8 chr2 8899438 8899814 -244356769 - THE1C LTR MaLR 0 375 1 1812 160 37 7 chr2 8900463 8900763 -244355820 - AluSx SINE Alu -3 309 1 564 229 118 0 chr2 8900962 8901106 -244355477 + MLT1J2 LTR MaLR 244 404 -46 197 214 48 0 chr2 8901848 8901890 -244354693 - L2 LINE L2 -50 3222 3179 350 254 64 0 chr2 8904359 8904469 -244352114 + MLT1G1 LTR MaLR 1 117 -478 228 286 0 0 chr2 8904674 8904730 -244351853 + GA-rich Low_complexity Low_complexity 2 57 0 250 235 17 101 chr2 8904888 8905007 -244351576 + MLT1J2 LTR MaLR 451 559 -36 285 299 103 25 chr2 8905691 8905895 -244350688 + MLT1J-int LTR MaLR 1148 1367 -4 2384 145 43 17 chr2 8905984 8906405 -244350178 + MSTB1 LTR MaLR 1 432 0 246 273 0 15 chr2 8906412 8906478 -244350105 + MLT1J LTR MaLR 64 128 -427 5669 153 48 5 chr2 8906482 8906760 -244349823 + L1PB1 LINE L1 3868 4133 -2018 1082 47 24 12 chr2 8906760 8906930 -244349653 + (GAAA)n Simple_repeat Simple_repeat 3 174 0 5669 153 48 5 chr2 8906930 8908759 -244347824 + L1PB1 LINE L1 4133 6069 -82 356 161 0 0 chr2 8908831 8908893 -244347690 - MER63 DNA MER1_type -756 305 244 272 246 0 0 chr2 8908866 8908927 -244347656 + MER63 DNA MER1_type 464 524 -536 * 771 228 51 30 chr2 8908969 8909206 -244347377 - MER63 DNA MER1_type -815 246 5 986 165 79 43 chr2 8909209 8909444 -244347139 + MER33 DNA MER1_type 24 272 -2313 2368 107 7 0 chr2 8909444 8909752 -244346831 - AluSx SINE Alu -2 310 1 986 165 79 43 chr2 8909752 8909795 -244346788 + MER33 DNA MER1_type 272 312 -12 450 247 96 18 chr2 8909850 8910016 -244346567 + MLT1J LTR MaLR 231 409 -102 207 0 0 0 chr2 8910045 8910068 -244346515 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 229 300 43 0 chr2 8910347 8910417 -244346166 + MIR SINE MIR 74 146 -116 314 286 64 82 chr2 8910618 8910838 -244345745 + MLT1L LTR MaLR 389 604 -11 2751 227 77 11 chr2 8911383 8912695 -244343888 + L1ME2 LINE L1 4705 6106 -58 1004 187 61 53 chr2 8912862 8913124 -244343459 - Tigger1 DNA MER2_type -2141 277 14 3803 210 78 29 chr2 8913276 8914271 -244342312 - L1MB7 LINE L1 -10 6174 5229 1655 163 10 42 chr2 8914271 8914577 -244342006 - AluJo SINE Alu -14 298 3 3803 210 78 29 chr2 8914577 8915430 -244341153 - L1MB7 LINE L1 -955 5229 4250 2044 258 134 31 chr2 8915429 8916946 -244339637 - L1M4b LINE L1 -3954 3184 1331 * 847 225 136 108 chr2 8917473 8918174 -244338409 + LTR8A LTR ERV1 1 720 -7 400 233 25 63 chr2 8918202 8918361 -244338222 - L1M4b LINE L1 -6320 535 383 284 274 82 0 chr2 8920179 8920252 -244336331 - L2 LINE L2 -57 3215 3137 517 167 175 8 chr2 8920311 8920437 -244336146 + MER104 DNA Tc2 31 177 -3 568 251 114 0 chr2 8920439 8920606 -244335977 - MIR SINE MIR -63 199 14 963 182 0 28 chr2 8920625 8920801 -244335782 - AluJb SINE Alu 0 312 142 243 282 94 0 chr2 8921401 8921486 -244335097 - MIR SINE MIR -7 255 163 2679 133 27 0 chr2 8922344 8922758 -244333825 - MSTA LTR MaLR -3 425 1 1192 200 61 19 chr2 8922986 8923465 -244333118 - Charlie1b DNA MER1_type 0 523 1 366 80 0 0 chr2 8923830 8923880 -244332703 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 1844 166 0 3 chr2 8923880 8924164 -244332419 - AluJb SINE Alu -29 283 1 627 118 0 0 chr2 8924185 8924278 -244332305 - L1P4 LINE L1 -469 5705 5613 3711 45 68 0 chr2 8924282 8924799 -244331784 + LTR30 LTR ERV1 1 552 -170 3237 16 3 0 chr2 8924799 8925185 -244331398 - L1PA4 LINE L1 -208 5947 5561 1594 45 0 0 chr2 8925185 8925387 -244331196 + L1PA4 LINE L1 5952 6153 -2 1307 78 6 0 chr2 8925387 8925566 -244331017 + LTR30 LTR ERV1 543 722 0 3426 81 15 68 chr2 8925566 8925854 -244330729 - L1PA8A LINE L1 -499 5632 5330 412 89 0 0 chr2 8925854 8925910 -244330673 - MSTA LTR MaLR -95 333 278 3426 81 15 68 chr2 8925910 8926480 -244330103 - L1PA8A LINE L1 -801 5330 4770 376 255 101 90 chr2 8927126 8927314 -244329269 + MIR SINE MIR 56 245 -17 1463 190 30 7 chr2 8927878 8928147 -244328436 - AluJo SINE Alu -30 282 8 292 327 9 47 chr2 8930613 8930720 -244325863 - MIR SINE MIR -82 126 24 272 279 29 0 chr2 8931050 8931118 -244325465 + L2 LINE L2 3153 3222 -50 2107 99 7 20 chr2 8931421 8931715 -244324868 + AluSg SINE Alu 21 310 0 222 37 0 0 chr2 8931723 8931750 -244324833 + (GAAA)n Simple_repeat Simple_repeat 2 28 0 466 248 14 43 chr2 8932673 8932814 -244323769 - L2 LINE L2 0 3272 3136 2302 106 0 3 chr2 8935181 8935492 -244321091 - AluSx SINE Alu -2 310 1 744 100 27 0 chr2 8936307 8936417 -244320166 + MER3 DNA MER1_type 1 113 -96 1050 98 92 0 chr2 8936419 8936572 -244320011 + AluSg/x SINE Alu 137 303 -7 417 214 102 10 chr2 8936572 8936670 -244319913 + MER3 DNA MER1_type 103 209 0 197 257 139 0 chr2 8937334 8937435 -244319148 + L2 LINE L2 2230 2344 -970 * 251 300 29 0 chr2 8937433 8937503 -244319080 - L2 LINE L2 0 3313 3242 812 239 25 5 chr2 8937711 8937908 -244318675 + MER20 DNA MER1_type 1 201 -18 2197 113 0 3 chr2 8938769 8939062 -244317521 - AluSg SINE Alu -18 292 1 324 0 0 0 chr2 8939548 8939584 -244316999 + (CA)n Simple_repeat Simple_repeat 2 37 0 321 275 107 20 chr2 8940234 8940383 -244316200 + MIR SINE MIR 101 262 0 417 320 64 0 chr2 8940770 8940895 -244315688 - L2 LINE L2 -1 3271 3139 450 344 0 7 chr2 8941088 8941242 -244315341 - MIR SINE MIR -109 153 1 9436 136 25 11 chr2 8941367 8942991 -244313592 + Tigger1 DNA MER2_type 1 1647 -771 435 52 0 0 chr2 8943175 8943233 -244313350 + (TA)n Simple_repeat Simple_repeat 2 59 0 1317 164 36 73 chr2 8943233 8943507 -244313076 - AluJb SINE Alu -2 310 47 25 0 0 0 chr2 8943515 8943540 -244313043 + AT_rich Low_complexity Low_complexity 1 25 0 2378 91 3 0 chr2 8943741 8944037 -244312546 - AluSp SINE Alu -16 297 1 593 223 152 40 chr2 8944124 8944348 -244312235 - LTR50 LTR ERVL -356 439 191 189 0 0 0 chr2 8944529 8944550 -244312033 + (A)n Simple_repeat Simple_repeat 1 21 0 416 301 124 16 chr2 8945013 8945199 -244311384 - MIR3 SINE MIR -1 207 2 334 277 187 24 chr2 8945453 8945619 -244310964 - MIR SINE MIR -50 212 20 776 204 15 91 chr2 8946684 8947013 -244309570 + L1MC4 LINE L1 7738 8041 -1 358 250 36 18 chr2 8947306 8947418 -244309165 + MIR SINE MIR 31 144 -118 2219 106 10 0 chr2 8947541 8947834 -244308749 - AluSx SINE Alu -16 296 1 195 218 0 0 chr2 8948557 8948612 -244307971 + GA-rich Low_complexity Low_complexity 3 57 0 1127 157 41 83 chr2 8949248 8949490 -244307093 + AluJb SINE Alu 79 310 -2 408 55 0 0 chr2 8949492 8949547 -244307036 + (TA)n Simple_repeat Simple_repeat 2 56 0 279 282 56 51 chr2 8949853 8950069 -244306514 - L1MEd LINE L1 -4881 1238 1022 29 28 0 0 chr2 8950214 8950250 -244306333 + AT_rich Low_complexity Low_complexity 1 36 0 1887 143 14 0 chr2 8950690 8951011 -244305572 + AluSx SINE Alu 1 325 0 1294 251 256 3 chr2 8951091 8951725 -244304858 - LTR50 LTR ERVL -1 794 1 1469 174 14 56 chr2 8951944 8952231 -244304352 + AluJo SINE Alu 1 275 -37 560 119 50 0 chr2 8952268 8952369 -244304214 + L1MC4a LINE L1 6890 6995 -813 1714 176 41 13 chr2 8952499 8952890 -244303693 - LTR52 LTR ERVL -9 412 11 2046 160 21 0 chr2 8952910 8953285 -244303298 + MLT1B LTR MaLR 1 383 -7 2188 121 3 3 chr2 8953996 8954301 -244302282 + AluSx SINE Alu 6 310 -2 270 293 98 12 chr2 8954307 8954389 -244302194 + MIR SINE MIR 20 108 -154 2289 102 10 0 chr2 8954569 8954862 -244301721 - AluSp SINE Alu -17 296 1 21 36 0 0 chr2 8954868 8954896 -244301687 + AT_rich Low_complexity Low_complexity 1 28 0 468 239 118 31 chr2 8955928 8956296 -244300287 - L1ME LINE L1 -528 5593 5175 225 132 0 26 chr2 8957007 8957045 -244299538 + MER3 DNA MER1_type 46 82 -127 513 225 17 0 chr2 8957488 8957608 -244298975 + MER33 DNA MER1_type 1 122 -202 283 329 50 56 chr2 8957664 8957825 -244298758 - MER5A DNA MER1_type -12 177 18 586 298 116 6 chr2 8957923 8958285 -244298298 + L1ME3 LINE L1 5428 5829 -333 747 256 53 112 chr2 8958828 8959234 -244297349 - L1MC4 LINE L1 -561 7481 7130 437 90 15 0 chr2 8959234 8959301 -244297282 + (TCTA)n Simple_repeat Simple_repeat 3 70 0 747 256 53 112 chr2 8959301 8959574 -244297009 - L1MC4 LINE L1 -912 7130 6842 2384 174 133 2 chr2 8959744 8960197 -244296386 - MLT2B2 LTR ERVL -3 512 1 801 248 188 14 chr2 8960209 8960682 -244295901 - MLT1H LTR MaLR -5 550 1 1250 108 0 0 chr2 8961519 8961676 -244294907 + AluSq SINE Alu 1 157 -156 1556 88 83 5 chr2 8961676 8961893 -244294690 + L1PB1 LINE L1 5918 6151 0 23 0 0 0 chr2 8961893 8961916 -244294667 + AT_rich Low_complexity Low_complexity 1 23 0 4827 135 8 23 chr2 8961935 8962721 -244293862 + L1PB4 LINE L1 5378 6151 -5 396 0 0 0 chr2 8963085 8963129 -244293454 + (TAAA)n Simple_repeat Simple_repeat 2 45 0 264 208 65 83 chr2 8964493 8964638 -244291945 + LTR47B LTR ERVL 254 384 -27 696 180 55 97 chr2 8964663 8964880 -244291703 - MER3 DNA MER1_type -1 208 1 2195 112 3 0 chr2 8965691 8965996 -244290587 + AluSq SINE Alu 1 306 -7 610 297 108 0 chr2 8966369 8966591 -244289992 - MIR SINE MIR -12 250 5 2048 124 0 17 chr2 8966618 8966945 -244289638 - AluSx SINE Alu 0 312 1 214 158 53 35 chr2 8967512 8967569 -244289014 + C-rich Low_complexity Low_complexity 1 58 0 22 99 0 0 chr2 8967678 8967749 -244288834 + GC_rich Low_complexity Low_complexity 1 71 0 510 246 222 10 chr2 8968489 8968696 -244287887 - MIR SINE MIR -3 259 9 576 97 0 0 chr2 8969423 8969495 -244287088 + AluJ/FRAM SINE Alu 222 293 -19 2086 113 17 13 chr2 8969497 8969798 -244286785 + AluSx SINE Alu 1 302 -10 225 0 0 0 chr2 8969812 8969837 -244286746 + (GA)n Simple_repeat Simple_repeat 2 26 0 710 274 87 17 chr2 8969900 8970130 -244286453 + MIR SINE MIR 3 248 -14 2466 188 33 35 chr2 8970131 8970202 -244286381 - MLT2B1 LTR ERVL -3 517 447 481 75 12 12 chr2 8970202 8970282 -244286301 + (TAGA)n Simple_repeat Simple_repeat 1 80 0 2466 188 33 35 chr2 8970282 8970722 -244285861 - MLT2B1 LTR ERVL -73 447 7 192 189 0 0 chr2 8971010 8971047 -244285536 - MIR SINE MIR -10 252 216 433 285 27 43 chr2 8971182 8971348 -244285235 + MIR SINE MIR 19 180 -66 205 262 110 84 chr2 8971920 8972111 -244284472 + MIR3 SINE MIR 5 200 -8 528 229 260 10 chr2 8973603 8973795 -244282788 + MIR SINE MIR 22 261 -1 186 174 0 0 chr2 8973800 8973846 -244282737 + (CAT)n Simple_repeat Simple_repeat 3 48 0 1609 106 5 0 chr2 8973923 8974140 -244282443 + L1PA10 LINE L1 5949 6166 -2 351 351 27 21 chr2 8974903 8975091 -244281492 + MER5A DNA MER1_type 1 189 0 1120 244 65 90 chr2 8975763 8975874 -244280709 - HAL1 LINE L1 -29 2478 2366 2045 108 19 54 chr2 8975874 8976190 -244280393 - AluSx SINE Alu -7 305 1 1120 244 65 90 chr2 8976190 8976590 -244279993 - HAL1 LINE L1 -141 2366 1980 410 329 40 13 chr2 8976700 8976928 -244279655 - HAL1 LINE L1 -510 1997 1764 513 180 39 47 chr2 8977103 8977231 -244279352 + MER106A DNA MER1_type 108 234 -2 235 323 21 0 chr2 8977310 8977403 -244279180 - LTR67 LTR ERVL -367 190 96 1539 208 90 32 chr2 8977485 8977984 -244278599 - HAL1 LINE L1 -910 1597 1070 2302 116 0 19 chr2 8978436 8978754 -244277829 + AluSx SINE Alu 1 312 0 22 0 0 0 chr2 8979037 8979059 -244277524 + AT_rich Low_complexity Low_complexity 1 22 0 353 205 36 12 chr2 8980262 8980345 -244276238 - L2 LINE L2 0 3313 3229 27 62 0 0 chr2 8980829 8980877 -244275706 + AT_rich Low_complexity Low_complexity 1 48 0 632 115 0 0 chr2 8981200 8981287 -244275296 + L1PA5 LINE L1 10 96 -6365 * 38548 51 6 1 chr2 8981254 8986802 -244269781 + L1PA5 LINE L1 893 6469 0 459 266 120 30 chr2 8986865 8987132 -244269451 + L1MC/D LINE L1 5254 5544 -2264 928 293 120 13 chr2 8987367 8987818 -244268765 + MLT1L LTR MaLR 24 522 -93 210 275 0 58 chr2 8988979 8989048 -244267535 - L2 LINE L2 -66 3206 3142 17757 186 53 18 chr2 8989187 8990316 -244266267 - L1PA15-16 LINE L1 -948 5901 4813 2295 82 0 0 chr2 8990316 8990624 -244265959 - AluY SINE Alu 0 308 1 17757 186 53 18 chr2 8990624 8991105 -244265478 - L1PA15-16 LINE L1 -2036 4813 4350 2162 135 0 0 chr2 8991105 8991402 -244265181 - AluSx SINE Alu -15 297 1 17757 186 53 18 chr2 8991402 8995517 -244261066 - L1PA15-16 LINE L1 -2499 4350 10 3402 126 23 6 chr2 8995533 8996050 -244260533 + Tigger1 DNA MER2_type 1893 2418 0 1702 180 27 23 chr2 8996314 8996614 -244259969 + AluJo SINE Alu 1 301 -11 429 220 86 59 chr2 8996928 8997114 -244259469 + L1MC5 LINE L1 7717 7907 -54 1945 174 0 3 chr2 8999347 8999658 -244256925 - AluJb SINE Alu -2 310 1 194 204 0 23 chr2 9000182 9000226 -244256357 - L2 LINE L2 0 3272 3230 224 246 87 14 chr2 9000637 9000706 -244255877 + MER5A DNA MER1_type 63 136 -53 322 326 183 15 chr2 9001004 9001332 -244255251 + L1MC/D LINE L1 5274 5656 -2152 299 342 0 8 chr2 9001637 9001754 -244254829 + LTR16B LTR ERVL 1 116 -348 267 259 88 31 chr2 9001824 9002017 -244254566 + LTR16B LTR ERVL 261 464 0 359 208 13 0 chr2 9002021 9002098 -244254485 - MIR SINE MIR -47 215 138 246 156 0 0 chr2 9002544 9002589 -244253994 + (CA)n Simple_repeat Simple_repeat 1 45 0 207 0 0 0 chr2 9004345 9004368 -244252215 + (CA)n Simple_repeat Simple_repeat 1 23 0 426 222 51 34 chr2 9004371 9004488 -244252095 + HAL1 LINE L1 795 913 -1594 1936 219 103 87 chr2 9004683 9004830 -244251753 + HAL1 LINE L1 964 1107 -1400 2209 105 0 7 chr2 9004830 9005125 -244251458 + AluSp SINE Alu 3 295 -18 1936 219 103 87 chr2 9005125 9005353 -244251230 + HAL1 LINE L1 1107 1330 -1177 2101 121 0 23 chr2 9005353 9005658 -244250925 + AluSx SINE Alu 1 298 -14 1936 219 103 87 chr2 9005658 9005802 -244250781 + HAL1 LINE L1 1330 1470 -1037 2420 57 3 3 chr2 9005802 9006098 -244250485 + AluY SINE Alu 1 296 -15 1936 219 103 87 chr2 9006098 9006515 -244250068 + HAL1 LINE L1 1470 1917 -590 277 271 35 104 chr2 9006601 9006967 -244249616 + HAL1 LINE L1 1849 2189 -318 5120 151 33 53 chr2 9006971 9007849 -244248734 + L1MB7 LINE L1 4901 5740 -444 2718 109 3 8 chr2 9007849 9008215 -244248368 - THE1B LTR MaLR 0 364 1 5120 151 33 53 chr2 9008215 9008639 -244247944 + L1MB7 LINE L1 5740 6171 -13 28425 34 0 0 chr2 9008659 9014824 -244241759 + L1PA4 LINE L1 4 6169 0 2408 81 3 0 chr2 9014826 9015121 -244241462 + AluSg SINE Alu 1 296 -14 374 291 108 24 chr2 9015121 9015416 -244241167 + HAL1 LINE L1 2187 2506 -1 429 293 73 24 chr2 9015733 9015938 -244240645 + MIR SINE MIR 37 251 -11 226 318 106 65 chr2 9016326 9016543 -244240040 + MIR SINE MIR 31 256 -6 1576 172 11 8 chr2 9016969 9017230 -244239353 - AluJb SINE Alu -44 268 7 345 267 151 5 chr2 9017262 9017496 -244239087 - L1ME2 LINE L1 -248 5914 5650 626 246 5 5 chr2 9017497 9017684 -244238899 - Charlie1 DNA MER1_type 0 2761 2575 629 292 5 10 chr2 9017690 9017907 -244238676 - L1ME2 LINE L1 -567 5599 5405 1808 134 33 24 chr2 9018119 9018448 -244238135 + MER1B DNA MER1_type 8 339 0 318 238 86 29 chr2 9018556 9018661 -244237922 + MIR SINE MIR 107 217 -45 491 206 44 56 chr2 9018665 9018825 -244237758 + L1MC4a LINE L1 5775 5932 -1876 360 0 0 0 chr2 9018847 9018887 -244237696 + (TA)n Simple_repeat Simple_repeat 2 41 0 2104 261 71 50 chr2 9018905 9018963 -244237620 + L1MC4a LINE L1 6104 6159 -1649 180 77 0 0 chr2 9018963 9018989 -244237594 + (TTAAA)n Simple_repeat Simple_repeat 3 28 0 2104 261 71 50 chr2 9018989 9019959 -244236624 + L1MC4a LINE L1 6159 7154 -654 295 276 152 21 chr2 9020035 9020177 -244236406 - MIR SINE MIR -62 146 15 22 0 0 0 chr2 9020816 9020838 -244235745 + AT_rich Low_complexity Low_complexity 1 22 0 2764 142 11 2 chr2 9021036 9021486 -244235097 - L1PA16 LINE L1 -1 6165 5712 2170 93 11 0 chr2 9021957 9022277 -244234306 - AluSg1 SINE Alu 0 323 1 1662 152 74 0 chr2 9022533 9022802 -244233781 - AluJb SINE Alu -23 289 1 322 333 139 6 chr2 9022833 9022998 -244233585 - MIR SINE MIR -38 224 38 208 269 0 0 chr2 9023722 9023774 -244232809 + L2 LINE L2 3262 3313 0 23 33 0 0 chr2 9025359 9025389 -244231194 + AT_rich Low_complexity Low_complexity 1 30 0 1191 222 18 45 chr2 9026813 9027210 -244229373 + L1ME1 LINE L1 5776 6161 -5 26 0 0 0 chr2 9027214 9027240 -244229343 + AT_rich Low_complexity Low_complexity 1 26 0 252 174 29 72 chr2 9027512 9027581 -244229002 - MIR3 SINE MIR -28 180 115 * 770 334 153 14 chr2 9027577 9028459 -244228124 + L2 LINE L2 2170 3179 -134 1623 100 4 8 chr2 9028600 9028841 -244227742 + L1PA8 LINE L1 5931 6170 -2 433 226 0 10 chr2 9028893 9028995 -244227588 + U13 snRNA snRNA 1 101 -3 305 264 94 19 chr2 9029459 9029565 -244227018 + L2 LINE L2 3189 3302 -11 251 294 118 8 chr2 9030354 9030473 -244226110 + MIR SINE MIR 55 186 -76 3496 152 73 6 chr2 9030665 9031354 -244225229 + L1MB8 LINE L1 5442 6176 -2 228 316 0 13 chr2 9031643 9031722 -244224861 + GA-rich Low_complexity Low_complexity 1 78 0 291 346 42 42 chr2 9031952 9032169 -244224414 + MIR SINE MIR 34 250 -12 525 194 0 11 chr2 9032702 9032795 -244223788 - L2 LINE L2 0 3272 3181 723 266 46 8 chr2 9033301 9033542 -244223041 + L1M4 LINE L1 3384 3633 -2513 947 236 98 0 chr2 9033546 9033822 -244222761 + L1MC4 LINE L1 7596 7898 -144 22 56 0 0 chr2 9033855 9033891 -244222692 + AT_rich Low_complexity Low_complexity 1 36 0 1525 148 67 78 chr2 9034027 9034400 -244222183 + L1MB2 LINE L1 5793 6161 -10 919 287 92 47 chr2 9035387 9035878 -244220705 + L2 LINE L2 2228 2740 -574 1825 178 18 50 chr2 9035891 9036292 -244220291 + L1MC3 LINE L1 7138 7525 -260 1805 144 46 7 chr2 9036292 9036576 -244220007 + AluJb SINE Alu 1 295 -17 1825 178 18 50 chr2 9036576 9036618 -244219965 + L1MC3 LINE L1 7525 7567 -218 1376 167 23 87 chr2 9036619 9037011 -244219572 + MLT1A2 LTR MaLR 3 505 0 1020 159 14 14 chr2 9037018 9037238 -244219345 + L1MC3 LINE L1 7566 7785 0 431 188 2 0 chr2 9037369 9037460 -244219123 + L1ME2 LINE L1 6069 6160 -2 352 279 33 25 chr2 9037506 9037628 -244218955 - MLT1G3 LTR MaLR -27 568 446 * 666 258 36 0 chr2 9037606 9037773 -244218810 - MLT1G3 LTR MaLR -187 343 171 307 239 51 17 chr2 9037833 9037950 -244218633 + L1ME4a LINE L1 5994 6114 -7 408 313 96 14 chr2 9039195 9039559 -244217024 - Tigger8 DNA MER2_type -162 504 111 254 374 0 26 chr2 9039727 9039842 -244216741 + L3 LINE CR1 1366 1477 -100 215 239 45 114 chr2 9039954 9040042 -244216541 - MIR SINE MIR -170 92 11 22 0 0 0 chr2 9040331 9040353 -244216230 + AT_rich Low_complexity Low_complexity 1 22 0 364 288 119 31 chr2 9041525 9041685 -244214898 - L3 LINE CR1 -380 1197 1024 400 264 37 62 chr2 9041763 9042005 -244214578 + Charlie8 DNA MER1_type 86 1419 -998 210 326 34 0 chr2 9042122 9042211 -244214372 - L3 LINE CR1 -708 869 778 740 147 0 0 chr2 9042326 9042435 -244214148 - FLAM_C SINE Alu -34 109 1 313 315 91 18 chr2 9043927 9044092 -244212491 - MIR SINE MIR -35 227 51 213 361 102 9 chr2 9044133 9044241 -244212342 - L2 LINE L2 -33 3239 3122 181 368 77 13 chr2 9044762 9044917 -244211666 - L2 LINE L2 -213 3059 2895 307 50 0 0 chr2 9045164 9045204 -244211379 + AluSg/x SINE Alu 218 257 -45 2526 50 0 3 chr2 9045589 9045889 -244210694 - AluY SINE Alu -12 299 1 289 346 0 28 chr2 9046018 9046125 -244210458 - MER5A DNA MER1_type -85 104 1 216 260 0 0 chr2 9046220 9046270 -244210313 - L2 LINE L2 -1444 1870 1821 473 264 129 49 chr2 9046495 9046844 -244209739 + LTR33 LTR ERVL 144 520 -1 477 236 67 61 chr2 9047658 9047823 -244208760 - MIR SINE MIR -52 210 45 208 231 154 0 chr2 9048473 9048538 -244208045 + MIR SINE MIR 123 197 -65 871 168 14 0 chr2 9050555 9050698 -244205885 - Tigger3b DNA MER2_type 0 1232 1088 4126 137 75 41 chr2 9050703 9051549 -244205034 - Tigger3b DNA MER2_type -357 874 1 1704 170 16 31 chr2 9053335 9053652 -244202931 + AluJo SINE Alu 1 312 0 931 102 5 43 chr2 9053653 9053839 -244202744 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 811 131 32 20 chr2 9053825 9054077 -244202506 + GA-rich Low_complexity Low_complexity 1 255 0 * 28 29 0 0 chr2 9054736 9054771 -244201812 + AT_rich Low_complexity Low_complexity 1 35 0 197 315 22 11 chr2 9054936 9055025 -244201558 + L3 LINE CR1 1485 1574 -3 2804 179 54 48 chr2 9055632 9056338 -244200245 - MER67C LTR ERV1 0 710 1 324 218 23 0 chr2 9056692 9056779 -244199804 - HsTC2 DNA Tc2 -2 1896 1808 2400 194 83 19 chr2 9056810 9057936 -244198647 - L1M3c LINE L1 -4805 1336 3 9711 158 76 48 chr2 9058018 9058607 -244197976 - L1MC3 LINE L1 0 7785 7214 280 284 0 0 chr2 9058607 9058688 -244197895 - MLT1F1 LTR MaLR -442 125 45 9711 158 76 48 chr2 9058688 9060247 -244196336 - L1MC3 LINE L1 -571 7214 5496 452 273 124 69 chr2 9060252 9060713 -244195870 - LTR67 LTR ERVL -40 517 32 348 261 50 36 chr2 9060745 9060967 -244195616 + L1ME4a LINE L1 5699 5923 -198 21 0 0 0 chr2 9061098 9061119 -244195464 + AT_rich Low_complexity Low_complexity 1 21 0 1972 149 10 3 chr2 9061128 9061424 -244195159 + AluSx SINE Alu 1 298 -14 868 302 38 44 chr2 9061663 9062136 -244194447 - MLT1J LTR MaLR -9 502 33 586 195 81 0 chr2 9062136 9062259 -244194324 + FLAM_A SINE Alu 1 133 0 644 106 0 10 chr2 9062264 9062368 -244194215 + (GGAA)n Simple_repeat Simple_repeat 3 105 0 273 311 39 19 chr2 9062388 9062491 -244194092 - MER5B DNA MER1_type 0 178 74 1762 145 31 102 chr2 9062903 9063323 -244193260 + MLT1B LTR MaLR 1 390 0 607 202 9 0 chr2 9063444 9063558 -244193025 - MER31B LTR ERV1 -351 115 1 2249 119 7 0 chr2 9064306 9064609 -244191974 - AluSq SINE Alu -8 305 1 352 250 71 120 chr2 9064612 9064796 -244191787 - MER5B DNA MER1_type -3 175 1 456 296 0 0 chr2 9064796 9064904 -244191679 - MIR3 SINE MIR -48 160 53 604 156 266 0 chr2 9065154 9065308 -244191275 + L1PA16 LINE L1 5963 6157 -9 1963 137 50 7 chr2 9065350 9065650 -244190933 + AluSq SINE Alu 1 313 0 2906 160 73 20 chr2 9066370 9066970 -244189613 + MER39 LTR ERV1 76 707 0 2092 116 184 68 chr2 9067045 9067454 -244189129 + LTR54 LTR ERV1 1 470 -40 1648 184 0 49 chr2 9067454 9067758 -244188825 + AluJb SINE Alu 3 291 -21 2092 116 184 68 chr2 9067758 9067805 -244188778 + LTR54 LTR ERV1 470 510 0 1277 157 5 18 chr2 9069330 9069547 -244187036 + AluJo SINE Alu 85 298 -14 2322 99 0 26 chr2 9069627 9069939 -244186644 + AluSc SINE Alu 1 304 -5 2161 123 13 7 chr2 9069998 9070299 -244186284 + AluSx SINE Alu 1 303 -9 435 188 35 0 chr2 9070616 9070701 -244185882 + AluJ/FLAM SINE Alu 2 89 -223 226 252 97 19 chr2 9070702 9070805 -244185778 + MIR3 SINE MIR 98 208 0 313 241 17 129 chr2 9070968 9071025 -244185558 + L3 LINE CR1 1282 1321 -256 1967 147 3 0 chr2 9071025 9071318 -244185265 + AluJb SINE Alu 1 294 -18 313 241 17 129 chr2 9071318 9071376 -244185207 + L3 LINE CR1 1321 1384 -193 599 293 72 14 chr2 9071416 9071638 -244184945 - MIR SINE MIR -26 236 2 238 277 15 0 chr2 9071666 9071731 -244184852 - L1MEc LINE L1 -5026 1370 1305 2648 64 0 0 chr2 9071795 9072106 -244184477 + AluY SINE Alu 1 311 0 559 273 81 48 chr2 9072524 9072856 -244183727 - L1MEc LINE L1 -4939 1266 932 2599 196 12 24 chr2 9072856 9073367 -244183216 - MLT1D LTR MaLR 0 505 1 559 273 81 48 chr2 9073367 9073442 -244183141 - L1MEc LINE L1 -5273 932 861 634 321 46 57 chr2 9073878 9074227 -244182356 - L2 LINE L2 0 3272 2928 1623 142 0 28 chr2 9075926 9076179 -244180404 - AluJb SINE Alu -9 303 58 1909 159 3 3 chr2 9077123 9077424 -244179159 + AluJb SINE Alu 1 301 -11 479 278 44 58 chr2 9078434 9078639 -244177944 - MIR SINE MIR -2 260 59 957 196 111 50 chr2 9078641 9078921 -244177662 - L1ME3A LINE L1 -1 6169 5873 1005 244 130 22 chr2 9078923 9079377 -244177206 - L1ME3A LINE L1 -1155 4991 4489 1702 149 0 0 chr2 9079377 9079632 -244176951 - AluSx SINE Alu -2 310 56 2063 261 91 33 chr2 9079732 9079803 -244176780 - L1ME3A LINE L1 -2576 3570 3505 2255 102 0 0 chr2 9079803 9080113 -244176470 - AluSg SINE Alu 0 310 1 2063 261 91 33 chr2 9080113 9080263 -244176320 - L1ME3A LINE L1 -2641 3505 3365 2606 67 0 6 chr2 9080263 9080576 -244176007 - AluY SINE Alu 0 311 1 2063 261 91 33 chr2 9080576 9080827 -244175756 - L1ME3A LINE L1 -2781 3365 3130 1246 152 46 112 chr2 9080827 9081002 -244175581 - AluSq SINE Alu -9 304 158 207 0 0 0 chr2 9081002 9081025 -244175558 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1246 152 46 112 chr2 9081025 9081172 -244175411 - AluSq SINE Alu -155 158 3 2063 261 91 33 chr2 9081172 9081864 -244174719 - L1ME3A LINE L1 -3016 3130 2336 561 224 19 26 chr2 9081959 9082115 -244174468 - L1M4 LINE L1 -2161 3985 3831 254 272 56 80 chr2 9082118 9082243 -244174340 - L2 LINE L2 0 3272 3151 994 146 19 13 chr2 9082700 9083035 -244173548 + FRAM SINE Alu 1 332 0 205 237 0 0 chr2 9083035 9083073 -244173510 + polypurine Low_complexity Low_complexity 3 40 0 233 374 30 26 chr2 9083154 9083456 -244173127 + L2 LINE L2 2587 2889 -425 2384 93 0 0 chr2 9084227 9084518 -244172065 + AluSx SINE Alu 1 291 -21 189 196 0 0 chr2 9085119 9085165 -244171418 + (CCA)n Simple_repeat Simple_repeat 2 47 0 660 192 0 17 chr2 9087023 9087195 -244169388 + (TG)n Simple_repeat Simple_repeat 2 170 0 245 263 219 53 chr2 9087424 9087538 -244169045 - L2 LINE L2 0 3272 3140 259 324 36 27 chr2 9088752 9088863 -244167720 - MIR SINE MIR -70 192 81 2035 151 20 0 chr2 9089621 9089919 -244166664 + AluJb SINE Alu 2 305 -7 2295 122 0 0 chr2 9090657 9090951 -244165632 + AluSx SINE Alu 1 294 -18 407 247 77 71 chr2 9091325 9091495 -244165088 - MIR SINE MIR -61 201 31 672 325 40 4 chr2 9091750 9092002 -244164581 + MIR SINE MIR 1 261 -1 2116 180 62 5 chr2 9092087 9092520 -244164063 - MER65C LTR ERV1 -2 459 2 2406 96 0 0 chr2 9094091 9094394 -244162189 + AluSx SINE Alu 1 303 -9 414 262 51 98 chr2 9095108 9095322 -244161261 + MIR SINE MIR 3 206 -56 284 235 15 15 chr2 9096098 9096161 -244160422 - MIR SINE MIR -36 226 164 450 289 94 25 chr2 9096161 9096385 -244160198 + MIR SINE MIR 3 239 -23 189 264 125 14 chr2 9096403 9096475 -244160108 - MIR SINE MIR -123 139 60 701 293 173 17 chr2 9098232 9098649 -244157934 + L1ME3A LINE L1 5433 5914 -256 2088 154 0 0 chr2 9098744 9099050 -244157533 + AluJb SINE Alu 1 306 -6 1835 103 107 11 chr2 9100909 9101206 -244155377 + AluSx SINE Alu 2 312 0 579 299 83 25 chr2 9101218 9101459 -244155124 + MIR SINE MIR 8 262 0 389 319 187 20 chr2 9102124 9102722 -244153861 + L2 LINE L2 2034 2731 -583 237 243 0 0 chr2 9102806 9102913 -244153670 + CT-rich Low_complexity Low_complexity 4 110 0 222 273 210 49 chr2 9104139 9104191 -244152392 + MIR SINE MIR 96 138 -124 2268 97 60 31 chr2 9104191 9104543 -244152040 + THE1B LTR MaLR 3 364 0 222 273 210 49 chr2 9104543 9104633 -244151950 + MIR SINE MIR 138 261 -1 1091 203 37 67 chr2 9104706 9104979 -244151604 + L1ME2 LINE L1 5643 5907 -257 1848 184 23 3 chr2 9104979 9105284 -244151299 - AluJb SINE Alu -1 311 1 1091 203 37 67 chr2 9105284 9105357 -244151226 + L1ME2 LINE L1 5907 5981 -183 396 338 29 0 chr2 9105611 9105747 -244150836 - MIR SINE MIR -10 252 113 381 227 58 138 chr2 9106407 9106493 -244150090 - L1ME LINE L1 -429 5692 5601 1952 171 0 0 chr2 9106493 9106798 -244149785 - AluJo SINE Alu -2 310 6 381 227 58 138 chr2 9106798 9106936 -244149647 - L1ME LINE L1 -520 5601 5486 2230 99 0 7 chr2 9107125 9107417 -244149166 - AluY SINE Alu -21 290 1 201 176 0 0 chr2 9107532 9107566 -244149017 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 580 273 64 11 chr2 9107654 9107841 -244148742 - MIR SINE MIR -28 234 38 441 286 67 0 chr2 9107888 9108007 -244148576 + MIR SINE MIR 23 149 -113 2294 105 3 0 chr2 9108196 9108500 -244148083 + AluSq SINE Alu 1 305 -8 2018 137 6 26 chr2 9109021 9109334 -244147249 - AluJo SINE Alu -5 307 1 353 203 0 14 chr2 9109892 9109961 -244146622 + MIR3 SINE MIR 89 156 -52 1698 228 13 51 chr2 9110300 9110808 -244145775 - L1PA16 LINE L1 -1 6165 5706 2145 147 0 3 chr2 9110825 9111132 -244145451 + AluSx SINE Alu 1 306 -6 515 242 204 8 chr2 9111293 9111533 -244145050 - L1ME3A LINE L1 -219 5951 5665 1898 185 0 0 chr2 9112861 9113163 -244143420 + AluJb SINE Alu 6 307 -5 2295 100 0 38 chr2 9113218 9113538 -244143045 + AluSq SINE Alu 1 308 -5 189 74 0 0 chr2 9113564 9113591 -244142992 + (CA)n Simple_repeat Simple_repeat 2 28 0 1121 158 30 0 chr2 9113929 9114132 -244142451 + MER2 DNA MER2_type 3 211 -134 1792 141 11 0 chr2 9114142 9114405 -244142178 - AluJb SINE Alu -5 307 42 186 43 0 0 chr2 9115198 9115221 -244141362 + (A)n Simple_repeat Simple_repeat 1 23 0 284 152 0 0 chr2 9115242 9115288 -244141295 - L2 LINE L2 0 3313 3268 214 278 178 0 chr2 9116151 9116241 -244140342 - L2 LINE L2 -1 3312 3207 2076 128 0 16 chr2 9116554 9116859 -244139724 - AluSx SINE Alu -12 300 1 28 0 0 0 chr2 9117216 9117244 -244139339 + AT_rich Low_complexity Low_complexity 1 28 0 783 133 0 0 chr2 9117244 9117349 -244139234 - FLAM_C SINE Alu -25 118 14 1297 266 64 21 chr2 9117371 9117807 -244138776 - MLT1F LTR MaLR 0 542 88 1062 182 9 78 chr2 9117807 9118038 -244138545 - AluJo SINE Alu -22 290 76 1930 203 19 7 chr2 9118048 9118467 -244138116 - L1MB4 LINE L1 -4 6176 5753 245 293 0 40 chr2 9118468 9118567 -244138016 - MLT1F LTR MaLR -444 98 4 237 337 105 0 chr2 9118595 9118690 -244137893 + L2 LINE L2 3186 3290 -23 286 197 15 45 chr2 9118852 9118918 -244137665 - MIR3 SINE MIR -18 190 127 547 218 0 8 chr2 9118928 9119052 -244137531 - MLT1C LTR MaLR -8 459 337 942 194 90 18 chr2 9119078 9119376 -244137207 - MLT1C LTR MaLR -155 412 85 257 204 0 0 chr2 9119393 9119447 -244137136 - AluJ/monomer SINE Alu 0 302 249 204 313 109 0 chr2 9120028 9120156 -244136427 - L2 LINE L2 -274 2998 2857 889 214 92 56 chr2 9120742 9121101 -244135482 - L1MD2 LINE L1 -1 6358 5987 180 0 0 0 chr2 9121109 9121129 -244135454 + (TTTTG)n Simple_repeat Simple_repeat 3 22 0 401 24 0 176 chr2 9121129 9121167 -244135416 - MER41A LTR ERV1 -89 465 448 2220 94 37 13 chr2 9121167 9121466 -244135117 + AluSx SINE Alu 3 308 -4 401 24 0 176 chr2 9121466 9121507 -244135076 - MER41A LTR ERV1 -106 448 401 2089 206 20 15 chr2 9121512 9121969 -244134614 - L1MD2 LINE L1 -465 5894 5436 28 0 0 0 chr2 9123981 9124009 -244132574 + GC_rich Low_complexity Low_complexity 1 28 0 245 197 15 15 chr2 9124490 9124556 -244132027 + (CCG)n Simple_repeat Simple_repeat 3 68 0 30 97 0 0 chr2 9124578 9124671 -244131912 + GC_rich Low_complexity Low_complexity 1 93 0 183 108 216 0 chr2 9124914 9124951 -244131632 + MIR SINE MIR 210 254 -8 856 115 122 22 chr2 9125098 9125237 -244131346 - AluJb SINE Alu -159 153 1 3289 200 33 26 chr2 9125551 9126148 -244130435 + MER44D DNA MER2_type 1 477 -2010 1927 153 27 0 chr2 9126148 9126448 -244130135 + AluJb SINE Alu 1 308 -4 3289 200 33 26 chr2 9126448 9126570 -244130013 + MER44D DNA MER2_type 477 597 -8 981 192 52 5 chr2 9126769 9126962 -244129621 + AluJb SINE Alu 96 297 -15 247 240 93 0 chr2 9127112 9127187 -244129396 + MIR SINE MIR 113 194 -68 586 259 58 0 chr2 9127479 9127653 -244128930 + L1M4 LINE L1 3850 4033 -2113 898 82 0 0 chr2 9127903 9128013 -244128570 + AluSg/x SINE Alu 195 304 -5 2125 125 0 3 chr2 9128022 9128310 -244128273 + AluSx SINE Alu 1 287 -25 546 288 55 20 chr2 9128456 9128794 -244127789 - L1MC/D LINE L1 -476 5645 5293 320 311 29 10 chr2 9128840 9128943 -244127640 - L1MC/D LINE L1 -1082 5064 4960 277 282 42 6 chr2 9129082 9129246 -244127337 + LTR16C LTR ERVL 271 407 -50 2331 97 7 3 chr2 9129248 9129557 -244127026 + AluSg SINE Alu 1 310 0 426 315 70 38 chr2 9130090 9130139 -244126444 - L1ME4a LINE L1 -206 5915 5869 2159 97 34 27 chr2 9130139 9130437 -244126146 + AluSq SINE Alu 1 300 -13 426 315 70 38 chr2 9130437 9130600 -244125983 - L1ME4a LINE L1 -252 5869 5696 343 108 15 62 chr2 9130626 9130691 -244125892 + MSTC LTR MaLR 1 62 -366 * 418 121 0 0 chr2 9130672 9130738 -244125845 + MSTC LTR MaLR 297 362 -66 2510 80 0 0 chr2 9130739 9131039 -244125544 + AluY SINE Alu 1 300 -11 2744 26 0 3 chr2 9131575 9131880 -244124703 + AluY SINE Alu 1 304 -7 2259 89 43 6 chr2 9131883 9132233 -244124350 + L1MA3 LINE L1 5943 6305 0 236 204 204 19 chr2 9132853 9132961 -244123622 - MER3 DNA MER1_type 0 209 82 883 149 105 88 chr2 9133256 9133551 -244123032 + MER58D DNA MER1_type 4 303 -83 195 42 0 0 chr2 9133679 9133703 -244122880 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 2578 47 3 3 chr2 9133926 9134227 -244122356 - AluY SINE Alu -10 301 1 1793 146 30 4 chr2 9134295 9134562 -244122021 - AluSx SINE Alu -38 274 1 22 0 0 0 chr2 9134904 9134926 -244121657 + AT_rich Low_complexity Low_complexity 1 22 0 211 305 211 21 chr2 9136628 9136723 -244119860 - L2 LINE L2 -5 3267 3155 288 253 64 56 chr2 9136726 9136895 -244119688 - MIR SINE MIR -62 146 19 241 309 44 69 chr2 9137662 9137866 -244118717 + MIR3 SINE MIR 10 208 0 268 270 63 56 chr2 9138287 9138413 -244118170 - MIR3 SINE MIR -67 141 15 328 305 250 6 chr2 9139210 9139374 -244117209 - MIR SINE MIR -12 250 47 1591 192 24 3 chr2 9139811 9140102 -244116481 + AluJo SINE Alu 1 297 -15 1697 145 54 30 chr2 9140362 9140659 -244115924 + AluJb SINE Alu 1 304 -8 183 320 77 13 chr2 9140804 9140882 -244115701 - MIR SINE MIR -95 113 31 464 246 39 52 chr2 9141051 9141236 -244115347 - L2 LINE L2 -12 3301 3073 231 236 14 42 chr2 9141848 9141920 -244114663 - MIR SINE MIR -102 106 37 1634 173 30 23 chr2 9142629 9142929 -244113654 - AluSg SINE Alu -8 302 1 2503 53 0 0 chr2 9143539 9143847 -244112736 + AluY SINE Alu 1 308 0 271 246 16 0 chr2 9144584 9144645 -244111938 - L2 LINE L2 -3 3269 3208 364 271 27 38 chr2 9144846 9144979 -244111604 - MIR SINE MIR -59 149 50 1887 113 8 0 chr2 9145278 9145535 -244111048 - AluSx SINE Alu -53 259 1 466 272 63 19 chr2 9145650 9145808 -244110775 - MLT1J2 LTR MaLR -284 166 2 545 247 97 53 chr2 9145808 9146035 -244110548 + L2 LINE L2 3045 3281 -32 183 80 0 0 chr2 9146373 9146398 -244110185 + (TGAA)n Simple_repeat Simple_repeat 1 25 0 22 88 0 0 chr2 9146545 9146602 -244109981 + AT_rich Low_complexity Low_complexity 1 57 0 313 242 57 117 chr2 9146610 9146706 -244109877 + L1MC5 LINE L1 7688 7788 -173 2067 120 0 46 chr2 9146706 9146997 -244109586 + AluSq SINE Alu 5 281 -32 231 36 0 0 chr2 9146997 9147025 -244109558 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 2067 120 0 46 chr2 9147025 9147057 -244109526 + AluSq SINE Alu 281 313 0 313 242 57 117 chr2 9147057 9147224 -244109359 + L1MC5 LINE L1 7788 7935 -26 372 343 12 58 chr2 9147550 9147666 -244108917 - MIR3 SINE MIR -14 194 87 2277 115 3 10 chr2 9147666 9147978 -244108605 + AluSx SINE Alu 1 310 -2 372 343 12 58 chr2 9147978 9148033 -244108550 - MIR3 SINE MIR -121 87 31 1895 150 20 3 chr2 9148395 9148689 -244107894 - AluJb SINE Alu -13 299 1 442 316 102 45 chr2 9148707 9148951 -244107632 - MIR SINE MIR -4 258 1 213 108 0 0 chr2 9149456 9149493 -244107090 + (CA)n Simple_repeat Simple_repeat 1 37 0 2098 205 75 0 chr2 9149627 9150110 -244106473 + L1MB7 LINE L1 5657 6175 -9 341 253 175 32 chr2 9150331 9150485 -244106098 + MIR SINE MIR 27 202 -60 512 247 26 74 chr2 9150880 9151070 -244105513 - MIR SINE MIR -76 186 6 707 206 65 35 chr2 9151174 9151344 -244105239 - MER45A DNA AcHobo 0 178 4 522 103 0 23 chr2 9152008 9152095 -244104488 + MLT1C LTR MaLR 3 87 -380 295 137 0 0 chr2 9152308 9152359 -244104224 + Alu SINE Alu 246 296 -5 286 279 51 0 chr2 9154240 9154319 -244102264 - MIR SINE MIR -84 178 96 275 293 49 24 chr2 9155459 9155582 -244101001 + MIR SINE MIR 86 211 -51 822 133 0 8 chr2 9156126 9156246 -244100337 - FLAM_A SINE Alu -12 121 3 546 237 201 16 chr2 9156488 9156682 -244099901 - MIR SINE MIR -5 257 28 1868 175 3 0 chr2 9158009 9158324 -244098259 + AluSx SINE Alu 1 316 0 2363 98 0 0 chr2 9159117 9159413 -244097170 + AluSc SINE Alu 1 296 -13 633 275 55 22 chr2 9159479 9159661 -244096922 - MIR SINE MIR -1 261 74 355 267 48 0 chr2 9160522 9160627 -244095956 + MIR SINE MIR 56 165 -97 412 259 6 6 chr2 9161112 9161238 -244095345 - MIR SINE MIR -66 142 46 479 241 99 0 chr2 9161914 9162055 -244094528 + MLT1F1 LTR MaLR 411 565 -2 2366 94 0 3 chr2 9162210 9162508 -244094075 + AluSx SINE Alu 1 297 -15 2233 107 23 3 chr2 9163281 9163580 -244093003 + AluSp SINE Alu 1 305 -8 261 83 0 0 chr2 9163580 9163616 -244092967 + (GGAA)n Simple_repeat Simple_repeat 1 36 0 690 253 116 58 chr2 9164786 9165236 -244091347 + MLT1J LTR MaLR 28 503 -8 387 329 36 7 chr2 9165289 9165426 -244091157 - MIR3 SINE MIR -10 198 58 460 230 112 37 chr2 9165438 9165478 -244091105 + LTR33 LTR ERVL 16 52 -469 2046 109 31 7 chr2 9165478 9165771 -244090812 - AluSg1 SINE Alu -9 300 1 460 230 112 37 chr2 9165771 9165891 -244090692 + LTR33 LTR ERVL 52 188 -333 518 191 118 7 chr2 9166642 9166778 -244089805 - MER63 DNA MER1_type -53 783 7 217 333 53 0 chr2 9166846 9166921 -244089662 - MER5A DNA MER1_type -1 188 110 614 215 0 6 chr2 9167179 9167351 -244089232 + (TGGA)n Simple_repeat Simple_repeat 1 171 0 1023 81 0 0 chr2 9167466 9167590 -244088993 + AluSg/x SINE Alu 182 305 -7 322 218 24 135 chr2 9167773 9167943 -244088640 + LTR67 LTR ERVL 5 155 -402 462 246 42 7 chr2 9168103 9168245 -244088338 + LTR67 LTR ERVL 386 532 -25 2284 108 0 10 chr2 9168423 9168728 -244087855 + AluSg SINE Alu 3 304 -6 330 286 40 32 chr2 9168741 9168867 -244087716 - MER5A DNA MER1_type -19 170 44 329 234 175 44 chr2 9168745 9168882 -244087701 + MER5A DNA MER1_type 35 189 0 * 275 199 109 33 chr2 9169224 9169355 -244087228 - LTR33A LTR ERVL -287 234 69 227 306 122 0 chr2 9169474 9169572 -244087011 - MIR SINE MIR -69 139 30 412 230 11 46 chr2 9170002 9170089 -244086494 - MIR3 SINE MIR -54 154 71 598 111 0 0 chr2 9170423 9170513 -244086070 - MER41B LTR ERV1 0 635 546 4603 91 11 20 chr2 9171592 9172233 -244084350 - MER41B LTR ERV1 0 635 1 303 225 42 0 chr2 9172392 9172463 -244084120 + MER105 DNA DNA 1 74 -130 257 246 48 16 chr2 9172488 9172614 -244083969 + (CATA)n Simple_repeat Simple_repeat 2 131 0 680 269 52 70 chr2 9172617 9172955 -244083628 - LTR16A LTR ERVL -48 402 70 3266 160 17 91 chr2 9172955 9173700 -244082883 + LTR8 LTR ERV1 1 690 -1 680 269 52 70 chr2 9173700 9173748 -244082835 - LTR16A LTR ERVL -380 70 23 2444 193 77 50 chr2 9173771 9174130 -244082453 + L1ME1 LINE L1 4614 4962 -1184 748 157 0 25 chr2 9174130 9174275 -244082308 - FLAM_C SINE Alu 0 142 1 2444 193 77 50 chr2 9174275 9174675 -244081908 + L1ME1 LINE L1 4962 5396 -750 1712 199 10 16 chr2 9174669 9175055 -244081528 + L1ME1 LINE L1 5615 5998 -168 * 2172 130 0 3 chr2 9175168 9175469 -244081114 + AluSx SINE Alu 1 300 -12 2308 91 10 7 chr2 9175469 9175776 -244080807 + AluSg1 SINE Alu 1 308 -1 1639 188 57 39 chr2 9175930 9176313 -244080270 - MLT1B LTR MaLR 0 390 1 236 245 19 19 chr2 9176355 9176408 -244080175 + MIR SINE MIR 23 75 -133 341 229 73 68 chr2 9176443 9176635 -244079948 + MER117 DNA MER1_type 2 194 -3 2149 129 0 10 chr2 9176882 9177185 -244079398 + AluSx SINE Alu 1 300 -12 342 234 53 0 chr2 9177253 9177347 -244079236 - MER20 DNA MER1_type -57 162 64 400 173 146 45 chr2 9177708 9177818 -244078765 + MIR SINE MIR 29 149 -113 288 212 8 127 chr2 9177823 9177892 -244078691 + MLT1J LTR MaLR 1 53 -458 1924 156 0 0 chr2 9177892 9178222 -244078361 - AluSx SINE Alu 0 330 1 288 212 8 127 chr2 9178222 9178269 -244078314 + MLT1J LTR MaLR 53 104 -407 536 254 110 76 chr2 9178283 9178574 -244078009 + MLT1J LTR MaLR 205 505 -6 23 0 0 0 chr2 9178714 9178737 -244077846 + AT_rich Low_complexity Low_complexity 1 23 0 185 288 125 0 chr2 9179081 9179161 -244077422 - MIR SINE MIR -52 210 121 534 305 6 0 chr2 9179296 9179463 -244077120 - MER119 DNA MER1_type -290 293 126 23 33 0 0 chr2 9179570 9179600 -244076983 + AT_rich Low_complexity Low_complexity 1 30 0 676 152 27 18 chr2 9179600 9179712 -244076871 - FLAM_A SINE Alu -18 124 12 313 247 25 0 chr2 9179721 9179802 -244076781 - MER119 DNA MER1_type -496 87 5 2303 105 0 3 chr2 9180045 9180350 -244076233 - AluSq SINE Alu -9 304 1 524 216 0 8 chr2 9180422 9180556 -244076027 + (TG)n Simple_repeat Simple_repeat 2 134 0 1004 187 44 4 chr2 9180700 9180951 -244075632 + L1 LINE L1 4247 4507 -1639 422 314 24 8 chr2 9181029 9181153 -244075430 + HAL1 LINE L1 1255 1380 -1127 2201 126 0 3 chr2 9181158 9181459 -244075124 + AluSx SINE Alu 3 302 -10 427 169 79 11 chr2 9181562 9181651 -244074932 - LTR54 LTR ERV1 -373 137 43 341 163 174 0 chr2 9181652 9181744 -244074839 + HAL1 LINE L1 2097 2204 -303 472 214 0 0 chr2 9181763 9181852 -244074731 - LTR49 LTR ERV1 0 595 507 534 138 0 0 chr2 9181862 9181942 -244074641 + FLAM SINE Alu 42 121 -22 2106 121 29 10 chr2 9181966 9182272 -244074311 - AluSx SINE Alu 0 312 1 708 264 110 35 chr2 9182315 9182422 -244074161 - LTR48B LTR ERV1 -150 494 397 3500 128 56 0 chr2 9182422 9182921 -244073662 - MER1A DNA MER1_type 0 527 1 708 264 110 35 chr2 9182921 9183131 -244073452 - LTR48B LTR ERV1 -247 397 153 4550 57 37 11 chr2 9183131 9184147 -244072436 - MER11A LTR ERVK 0 1266 1 443 75 0 50 chr2 9184147 9184226 -244072357 - LTR48B LTR ERV1 -486 158 84 365 226 34 124 chr2 9184385 9184477 -244072106 + HAL1 LINE L1 2260 2359 -148 2063 155 0 0 chr2 9184477 9184767 -244071816 + AluJb SINE Alu 1 290 -22 365 226 34 124 chr2 9184767 9184940 -244071643 + HAL1 LINE L1 2359 2501 -6 2246 131 3 0 chr2 9185001 9185306 -244071277 + AluSx SINE Alu 1 306 -6 1093 261 65 21 chr2 9185446 9185771 -244070812 + MER58B DNA MER1_type 1 339 -2 463 325 33 0 chr2 9185804 9185955 -244070628 + MIR SINE MIR 51 206 -56 2527 80 0 0 chr2 9186306 9186608 -244069975 + AluSq SINE Alu 1 302 -11 242 254 58 56 chr2 9187352 9187524 -244069059 - MIR SINE MIR -62 146 17 354 23 0 0 chr2 9188131 9188174 -244068409 + (CA)n Simple_repeat Simple_repeat 2 44 0 423 279 11 49 chr2 9189235 9189418 -244067165 + (TATG)n Simple_repeat Simple_repeat 3 178 0 2127 135 7 0 chr2 9190040 9190344 -244066239 + AluSx SINE Alu 1 306 -6 709 265 109 73 chr2 9190380 9190821 -244065762 + L1MC4 LINE L1 7444 7900 -142 534 295 51 6 chr2 9191157 9191313 -244065270 + MIR SINE MIR 26 188 -74 300 239 0 28 chr2 9191376 9191458 -244065125 - MER5A DNA MER1_type -23 166 76 426 311 48 6 chr2 9191488 9191655 -244064928 + L2 LINE L2 2881 3054 -218 389 266 42 63 chr2 9191793 9191936 -244064647 - MIR SINE MIR -102 160 21 2348 93 7 3 chr2 9192023 9192325 -244064258 - AluSx SINE Alu -9 303 1 198 283 19 0 chr2 9193410 9193463 -244063120 + L2 LINE L2 2156 2209 -1105 2414 86 0 16 chr2 9193486 9193800 -244062783 + AluSx SINE Alu 1 309 -3 509 21 62 10 chr2 9193883 9193979 -244062604 + (CA)n Simple_repeat Simple_repeat 1 101 0 3857 96 26 100 chr2 9193979 9194696 -244061887 - MER4A LTR ERV1 0 664 1 240 35 0 0 chr2 9194696 9194725 -244061858 + (CA)n Simple_repeat Simple_repeat 2 30 0 330 313 104 21 chr2 9194971 9195115 -244061468 + MIR SINE MIR 22 177 -85 592 254 53 30 chr2 9195236 9195405 -244061178 + MIR SINE MIR 68 240 -22 183 300 169 53 chr2 9196064 9196401 -244060182 + L2 LINE L2 2213 2588 -726 238 191 0 0 chr2 9196439 9196486 -244060097 + MER58B DNA MER1_type 295 341 0 245 303 134 39 chr2 9196917 9197224 -244059359 - L1ME3A LINE L1 -223 5947 5612 255 247 92 53 chr2 9197310 9197472 -244059111 - L1ME3A LINE L1 -704 5452 5319 277 171 43 29 chr2 9197572 9197642 -244058941 - Charlie4 DNA MER1_type -1879 82 12 27 29 0 0 chr2 9197713 9197747 -244058836 + AT_rich Low_complexity Low_complexity 1 34 0 2043 103 19 39 chr2 9198283 9198454 -244058129 - AluJb SINE Alu -8 304 140 2386 108 0 0 chr2 9198454 9198761 -244057822 - AluSx SINE Alu -5 307 1 2043 103 19 39 chr2 9198761 9198899 -244057684 - AluJb SINE Alu -172 140 1 399 278 202 15 chr2 9198914 9199112 -244057471 - MIR SINE MIR -8 254 20 2468 75 0 3 chr2 9199608 9199914 -244056669 - AluY SINE Alu -6 305 1 201 264 99 11 chr2 9199961 9200052 -244056531 - MIR SINE MIR -12 250 152 358 202 58 18 chr2 9200618 9200746 -244055837 + MIR3 SINE MIR 60 196 -12 360 296 139 12 chr2 9201320 9201492 -244055091 + MIR3 SINE MIR 15 208 0 4596 173 54 22 chr2 9201710 9203310 -244053273 - L1MB7 LINE L1 -25 6159 4503 659 143 0 0 chr2 9203310 9203415 -244053168 - AluSg/x SINE Alu 0 312 208 280 156 0 6 chr2 9203415 9203474 -244053109 - Alu SINE Alu -268 40 1 1227 218 29 35 chr2 9203474 9203788 -244052795 - L1MB7 LINE L1 -1664 4482 4169 2292 48 44 24 chr2 9203788 9204082 -244052501 - AluY SINE Alu -5 306 7 1227 218 29 35 chr2 9204082 9204111 -244052472 - L1MB7 LINE L1 -1977 4169 4141 217 306 148 0 chr2 9206323 9206431 -244050152 + L2 LINE L2 3142 3265 -7 239 204 41 0 chr2 9206759 9206808 -244049775 + (TCCA)n Simple_repeat Simple_repeat 3 53 0 544 191 89 64 chr2 9207071 9207228 -244049355 + MER58C DNA MER1_type 43 203 -12 221 250 0 0 chr2 9208486 9208530 -244048053 + L3 LINE CR1 1532 1575 -2 218 308 63 25 chr2 9209544 9209677 -244046906 - MIR SINE MIR -65 143 18 502 326 39 11 chr2 9214527 9214705 -244041878 + L2 LINE L2 3130 3312 -1 309 283 18 53 chr2 9215585 9215698 -244040885 + MIR SINE MIR 12 120 -142 * 672 216 88 66 chr2 9215697 9215830 -244040753 - MIR SINE MIR -5 257 115 2460 96 0 0 chr2 9215830 9216133 -244040450 + AluSx SINE Alu 1 303 -9 672 216 88 66 chr2 9216133 9216226 -244040357 - MIR SINE MIR -147 115 26 276 322 67 31 chr2 9216174 9216398 -244040185 + MIR SINE MIR 7 242 -20 * 715 231 15 5 chr2 9217898 9218097 -244038486 + MER20 DNA MER1_type 19 219 0 21 0 0 0 chr2 9218628 9218649 -244037934 + AT_rich Low_complexity Low_complexity 1 21 0 205 184 0 0 chr2 9218667 9218705 -244037878 + (TATG)n Simple_repeat Simple_repeat 1 38 0 1641 146 4 4 chr2 9219321 9219575 -244037008 + AluJo SINE Alu 1 254 -58 216 359 35 78 chr2 9219644 9219725 -244036858 - L2 LINE L2 -538 2776 2693 2413 90 3 13 chr2 9219725 9220037 -244036546 + AluSg SINE Alu 1 309 -1 216 359 35 78 chr2 9220037 9220186 -244036397 - L2 LINE L2 -621 2693 2556 1229 160 9 5 chr2 9220221 9220433 -244036150 - MER4E LTR ERV1 0 779 567 * 1718 141 63 30 chr2 9220427 9220760 -244035823 - MER4B LTR ERV1 -266 344 1 268 158 368 11 chr2 9220765 9220860 -244035723 - MIR SINE MIR -66 196 68 529 193 28 0 chr2 9221892 9222001 -244034582 - MIR SINE MIR -129 133 22 2166 123 41 0 chr2 9223122 9223464 -244033119 + THE1B LTR MaLR 2 357 -7 264 273 10 30 chr2 9223529 9223628 -244032955 + MLT1K LTR MaLR 492 588 0 241 263 14 111 chr2 9224358 9224415 -244032168 + MIR SINE MIR 11 56 -152 1676 192 0 10 chr2 9224415 9224723 -244031860 - AluJo SINE Alu -7 305 1 241 263 14 111 chr2 9224723 9224786 -244031797 + MIR SINE MIR 56 124 -84 872 159 0 0 chr2 9224953 9225085 -244031498 + AluJo SINE Alu 2 133 -169 2392 89 86 9 chr2 9225099 9225437 -244031146 + THE1B LTR MaLR 1 364 0 858 160 0 75 chr2 9225439 9225585 -244030998 + AluJo SINE Alu 140 261 -174 1079 73 11 17 chr2 9225585 9225763 -244030820 + (GAAA)n Simple_repeat Simple_repeat 2 178 0 858 160 0 75 chr2 9225763 9225926 -244030657 + AluJo SINE Alu 261 435 0 255 266 152 0 chr2 9227169 9227248 -244029335 + MIR SINE MIR 57 147 -61 2043 139 3 19 chr2 9227267 9227577 -244029006 + AluSx SINE Alu 1 305 -7 194 244 24 0 chr2 9227586 9227627 -244028956 + MIR SINE MIR 218 259 -3 2313 71 3 3 chr2 9228181 9228496 -244028087 + AluY SINE Alu 1 315 0 1935 146 3 54 chr2 9228503 9228819 -244027764 + AluSx SINE Alu 1 300 -12 2382 105 0 3 chr2 9229063 9229376 -244027207 + AluSx SINE Alu 1 312 0 1576 175 91 4 chr2 9229432 9229706 -244026877 + AluJb SINE Alu 1 298 -14 190 333 63 16 chr2 9230479 9230605 -244025978 + MIR SINE MIR 120 251 -11 242 71 0 24 chr2 9230607 9230649 -244025934 + (TGAA)n Simple_repeat Simple_repeat 1 41 0 459 258 42 72 chr2 9230957 9231124 -244025459 - MER91B DNA MER1_type -11 179 18 1886 158 14 0 chr2 9231169 9231461 -244025122 + AluJo SINE Alu 1 296 -16 436 296 206 7 chr2 9232009 9232310 -244024273 + L2 LINE L2 2912 3272 0 459 316 56 71 chr2 9232392 9232785 -244023798 - L2 LINE L2 -508 2806 2420 2462 73 3 0 chr2 9234141 9234441 -244022142 - AluY SINE Alu -10 301 1 2103 137 20 7 chr2 9234449 9234749 -244021834 - AluJb SINE Alu -8 304 1 206 265 20 0 chr2 9235544 9235593 -244020990 + L2 LINE L2 3194 3243 -29 639 39 0 0 chr2 9235975 9236053 -244020530 + (TC)n Simple_repeat Simple_repeat 1 78 0 4946 108 3 3 chr2 9236304 9236991 -244019592 - L1PA10 LINE L1 -1 6167 5481 2150 128 10 6 chr2 9236991 9237303 -244019280 - AluSp SINE Alu 0 313 1 2091 131 3 10 chr2 9237391 9237697 -244018886 - AluSq SINE Alu -7 306 3 245 285 61 144 chr2 9237741 9238004 -244018579 - MIR SINE MIR -2 260 20 1746 157 51 40 chr2 9238074 9238133 -244018450 - L1MB8 LINE L1 -9 6169 6112 1671 194 3 7 chr2 9238133 9238443 -244018140 + AluJo SINE Alu 1 309 -3 1746 157 51 40 chr2 9238443 9238758 -244017825 - L1MB8 LINE L1 -66 6112 5791 2366 169 38 0 chr2 9238759 9239202 -244017381 + MLT1C LTR MaLR 3 462 -5 2719 149 45 79 chr2 9239202 9239517 -244017066 - L1MB8 LINE L1 -401 5783 5459 2287 117 42 28 chr2 9239517 9239728 -244016855 - THE1B LTR MaLR 0 364 144 2008 140 0 13 chr2 9239728 9240036 -244016547 + AluSc SINE Alu 1 304 -5 2287 117 42 28 chr2 9240036 9240183 -244016400 - THE1B LTR MaLR -220 144 1 2719 149 45 79 chr2 9240183 9240423 -244016160 - L1MB8 LINE L1 -725 5459 5262 2275 114 0 16 chr2 9240423 9240740 -244015843 + AluJb SINE Alu 1 312 0 2719 149 45 79 chr2 9240740 9240869 -244015714 - L1MB8 LINE L1 -922 5262 5130 282 300 9 55 chr2 9240896 9241006 -244015577 + L2 LINE L2 2642 2746 -568 583 86 43 0 chr2 9241006 9241138 -244015445 + AluJb SINE Alu 189 324 0 998 284 81 45 chr2 9241170 9241653 -244014930 + L2 LINE L2 2812 3311 -2 449 267 240 0 chr2 9241859 9242005 -244014578 - MER5A DNA MER1_type 0 189 9 329 266 55 37 chr2 9242351 9242460 -244014123 - L2 LINE L2 -4 3309 3199 253 379 121 0 chr2 9242784 9242966 -244013617 - L2 LINE L2 -179 3093 2890 1276 204 96 16 chr2 9243076 9243390 -244013193 - MER58B DNA MER1_type -2 339 1 2460 177 33 124 chr2 9243952 9244285 -244012298 + MER63C DNA MER1_type 1 226 -834 2884 13 3 0 chr2 9244285 9244598 -244011985 + AluYb8 SINE Alu 1 314 -4 2460 177 33 124 chr2 9244598 9245027 -244011556 + MER63C DNA MER1_type 226 693 -237 319 256 13 0 chr2 9245033 9245111 -244011472 + MER63C DNA MER1_type 854 932 0 192 333 0 0 chr2 9245444 9245501 -244011082 - MIR3 SINE MIR -15 193 137 2628 58 0 0 chr2 9245512 9245822 -244010761 - AluY SINE Alu -1 310 1 228 107 18 36 chr2 9246378 9246434 -244010149 + (TTCTCC)n Simple_repeat Simple_repeat 5 59 0 21 0 0 0 chr2 9246434 9246455 -244010128 + AT_rich Low_complexity Low_complexity 1 21 0 1048 219 102 29 chr2 9246455 9246770 -244009813 - MER46C DNA MER2_type 0 338 1 212 245 0 0 chr2 9248038 9248087 -244008496 + CT-rich Low_complexity Low_complexity 3 51 0 208 304 52 61 chr2 9248232 9248347 -244008236 + MIR SINE MIR 23 136 -126 25 75 0 0 chr2 9248634 9248687 -244007896 + GC_rich Low_complexity Low_complexity 1 53 0 1630 77 5 0 chr2 9248843 9249038 -244007545 + AluSp SINE Alu 104 299 -14 214 200 0 0 chr2 9249236 9249276 -244007307 + T-rich Low_complexity Low_complexity 1 40 0 254 382 49 16 chr2 9250007 9250130 -244006453 - L2 LINE L2 -21 3251 3125 201 254 127 0 chr2 9250432 9250487 -244006096 + L2 LINE L2 2433 2494 -820 384 130 101 0 chr2 9250566 9250635 -244005948 - Charlie5 DNA MER1_type -2527 85 10 269 180 20 0 chr2 9250656 9250706 -244005877 + MER5A DNA MER1_type 42 92 -97 449 265 119 13 chr2 9250772 9250923 -244005660 - MER5B DNA MER1_type -11 167 1 * 1087 263 95 39 chr2 9250923 9251555 -244005028 - L2 LINE L2 -141 3172 2496 2309 108 0 6 chr2 9252092 9252406 -244004177 - AluSx SINE Alu 0 312 1 187 351 52 0 chr2 9252550 9252627 -244003956 - L2 LINE L2 -1 3312 3232 189 0 0 0 chr2 9252644 9252665 -244003918 + (A)n Simple_repeat Simple_repeat 1 21 0 686 202 74 15 chr2 9252738 9252852 -244003731 - Charlie4 DNA MER1_type -7 1954 1848 1427 166 109 22 chr2 9252852 9253172 -244003411 - MER7A DNA MER2_type 0 346 1 686 202 74 15 chr2 9253172 9253260 -244003323 - Charlie4 DNA MER1_type -113 1848 1740 1007 180 131 37 chr2 9354301 9354545 -243902038 + AluJo SINE Alu 1 267 -45 414 0 0 0 chr2 9354577 9354623 -243901960 + (CA)n Simple_repeat Simple_repeat 1 46 0 1714 154 0 34 chr2 9355164 9355462 -243901121 - AluJo SINE Alu -24 288 1 2078 120 0 3 chr2 9355566 9355866 -243900717 - AluSq SINE Alu -14 299 1 231 190 139 63 chr2 9355917 9355996 -243900587 + MIR3 SINE MIR 102 186 -22 1749 113 68 0 chr2 9356775 9357040 -243899543 - AluSx SINE Alu -29 283 1 968 276 79 3 chr2 9357042 9357411 -243899172 - L1ME1 LINE L1 -220 5946 5550 223 293 150 30 chr2 9358490 9358623 -243897960 + MIR SINE MIR 71 219 -43 887 158 22 27 chr2 9358972 9359155 -243897428 + AluJo SINE Alu 107 288 -24 559 283 53 0 chr2 9359755 9359907 -243896676 + MIR SINE MIR 19 178 -84 2131 94 13 3 chr2 9360086 9360385 -243896198 + AluSx SINE Alu 3 304 -8 689 217 0 8 chr2 9360418 9360547 -243896036 - MER8 DNA MER2_type 0 239 112 540 275 111 19 chr2 9361414 9361621 -243894962 + MIR SINE MIR 20 245 -17 521 264 67 39 chr2 9361689 9361910 -243894673 - L1ME4a LINE L1 -18 6103 5871 1242 164 114 8 chr2 9361910 9362172 -243894411 - AluJo SINE Alu -22 290 1 521 264 67 39 chr2 9362172 9362234 -243894349 - L1ME4a LINE L1 -250 5871 5812 2174 104 16 0 chr2 9362306 9362614 -243893969 + AluSq SINE Alu 1 313 0 236 295 139 29 chr2 9362810 9363091 -243893492 - L1ME4a LINE L1 -528 5593 5282 239 250 198 10 chr2 9364855 9364951 -243891632 + MIR SINE MIR 37 150 -112 289 80 40 40 chr2 9365039 9365089 -243891494 + L1MC5 LINE L1 7740 7789 -172 830 186 11 17 chr2 9365475 9365607 -243890976 + AluJb SINE Alu 137 269 -43 1782 170 70 23 chr2 9365607 9366037 -243890546 + LTR7 LTR ERV1 1 450 0 830 186 11 17 chr2 9366037 9366081 -243890502 + AluJb SINE Alu 269 312 0 2196 96 0 3 chr2 9366740 9367033 -243889550 + AluSx SINE Alu 21 312 0 282 270 33 53 chr2 9367548 9367700 -243888883 + MER5B DNA MER1_type 30 178 0 929 164 30 0 chr2 9368436 9368601 -243887982 + AluJb SINE Alu 129 298 -14 2011 128 6 39 chr2 9368917 9369229 -243887354 - AluSx SINE Alu -10 302 1 2043 131 0 3 chr2 9369337 9369659 -243886924 - AluSx SINE Alu 0 321 1 2456 76 3 0 chr2 9370553 9370857 -243885726 + AluSg SINE Alu 1 305 -5 1637 188 20 10 chr2 9370866 9371159 -243885424 + AluJb SINE Alu 1 296 -16 2155 109 3 16 chr2 9371159 9371471 -243885112 + AluSc SINE Alu 1 308 -1 2150 112 14 3 chr2 9371480 9371776 -243884807 + AluSc SINE Alu 2 300 -9 2260 110 7 0 chr2 9372423 9372731 -243883852 + AluSx SINE Alu 2 311 -1 2406 89 7 0 chr2 9372748 9373050 -243883533 + AluSg SINE Alu 1 304 -6 2030 92 55 14 chr2 9373123 9373416 -243883167 + AluSq SINE Alu 3 307 -6 854 151 0 0 chr2 9373833 9373952 -243882631 - FLAM_C SINE Alu -24 119 1 2461 90 0 0 chr2 9374187 9374488 -243882095 + AluSx SINE Alu 3 303 -9 502 113 94 57 chr2 9375104 9375210 -243881373 - MER5A DNA MER1_type -79 110 1 899 134 25 45 chr2 9375297 9375454 -243881129 + FAM SINE Alu 18 171 -14 239 278 83 14 chr2 9376657 9376729 -243879854 + MIR SINE MIR 34 110 -152 188 279 0 0 chr2 9376854 9376897 -243879686 + L2 LINE L2 3264 3306 -7 2412 97 0 0 chr2 9376934 9377243 -243879340 - AluSg SINE Alu -1 309 1 2095 122 7 3 chr2 9377359 9377662 -243878921 + AluSx SINE Alu 1 304 -8 213 233 0 0 chr2 9377696 9377739 -243878844 - L2 LINE L2 -7 3306 3264 205 200 183 0 chr2 9377817 9377877 -243878706 - MIR SINE MIR -70 192 122 644 125 0 0 chr2 9377914 9378002 -243878581 + AluSg/x SINE Alu 201 288 -22 1949 81 49 0 chr2 9378002 9378248 -243878335 + AluSg SINE Alu 39 296 -14 314 256 64 40 chr2 9378855 9378980 -243877603 + LTR67 LTR ERVL 428 555 -2 191 36 36 0 chr2 9379268 9379296 -243877287 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 2314 94 0 3 chr2 9379302 9379601 -243876982 - AluSx SINE Alu -14 298 1 1874 171 14 0 chr2 9379605 9379898 -243876685 - AluJb SINE Alu -15 297 1 1658 174 27 13 chr2 9380202 9380501 -243876082 + AluJo SINE Alu 1 303 -9 841 169 0 0 chr2 9380509 9380639 -243875944 + FLAM_C SINE Alu 1 130 -3 242 276 69 11 chr2 9380706 9380793 -243875790 + MIR SINE MIR 24 115 -93 916 127 0 28 chr2 9381164 9381306 -243875277 - FLAM_C SINE Alu -5 138 1 2431 81 0 7 chr2 9381315 9381623 -243874960 - AluY SINE Alu -5 306 1 1068 213 126 12 chr2 9381923 9382177 -243874406 + AluSg1 SINE Alu 13 295 -14 1869 128 25 75 chr2 9382483 9382804 -243873779 - AluJb SINE Alu -7 305 1 2116 127 6 22 chr2 9382808 9382989 -243873594 - AluSx SINE Alu -2 310 135 2223 102 17 0 chr2 9382989 9383284 -243873299 - AluSp SINE Alu -13 300 1 2116 127 6 22 chr2 9383284 9383417 -243873166 - AluSx SINE Alu -177 135 1 1968 143 3 13 chr2 9384245 9384381 -243872202 + AluJb SINE Alu 1 137 -175 2150 89 6 70 chr2 9384381 9384696 -243871887 + AluSx SINE Alu 1 295 -17 1968 143 3 13 chr2 9384696 9384859 -243871724 + AluJb SINE Alu 137 297 -15 315 125 21 0 chr2 9385013 9385061 -243871522 + MLT1B LTR MaLR 279 327 -63 1813 168 46 98 chr2 9385284 9385350 -243871233 - MLT1C LTR MaLR 0 467 399 1826 138 6 28 chr2 9385350 9385669 -243870914 + AluJb SINE Alu 1 312 0 1813 168 46 98 chr2 9385669 9386083 -243870500 - MLT1C LTR MaLR -68 399 12 1894 120 0 0 chr2 9386551 9386801 -243869782 - AluSx SINE Alu -62 250 1 473 133 44 23 chr2 9386834 9386923 -243869660 + L1MD3 LINE L1 7621 7794 -201 * 813 174 141 24 chr2 9386895 9387108 -243869475 + L1MB5 LINE L1 5935 6172 -2 1607 124 98 23 chr2 9387125 9387391 -243869192 - AluJo SINE Alu -26 286 1 803 166 96 3 chr2 9387412 9387439 -243869144 + L1MD3 LINE L1 7562 7585 -410 2210 112 7 0 chr2 9387439 9387735 -243868848 + AluSx SINE Alu 1 298 -14 803 166 96 3 chr2 9387735 9387914 -243868669 + L1MD3 LINE L1 7585 7995 0 1908 152 0 20 chr2 9387923 9388219 -243868364 + AluSx SINE Alu 1 290 -22 947 124 0 0 chr2 9388771 9388900 -243867683 + FLAM_C SINE Alu 5 133 0 2647 50 0 0 chr2 9389025 9389322 -243867261 + AluSc SINE Alu 3 299 -10 1050 176 126 70 chr2 9389946 9390410 -243866173 - MLT1F LTR MaLR -17 550 2 527 250 30 30 chr2 9390411 9390578 -243866005 + Charlie2 DNA MER1_type 2629 2798 -64 2286 86 3 0 chr2 9390578 9390869 -243865714 - AluY SINE Alu -19 292 1 527 250 30 30 chr2 9390869 9390901 -243865682 + Charlie2 DNA MER1_type 2797 2828 -34 1480 168 97 8 chr2 9390902 9391170 -243865413 + AluJo SINE Alu 2 293 -19 2398 86 3 0 chr2 9391171 9391474 -243865109 + AluSc SINE Alu 1 304 -5 2152 99 0 18 chr2 9391685 9391967 -243864616 + AluSq SINE Alu 1 277 -36 227 206 48 32 chr2 9392032 9392095 -243864488 - L2 LINE L2 -7 3265 3202 30 59 0 0 chr2 9393024 9393075 -243863508 + GC_rich Low_complexity Low_complexity 1 51 0 2292 92 0 3 chr2 9395378 9395671 -243860912 - AluSg SINE Alu -18 292 1 2441 89 0 3 chr2 9395747 9396061 -243860522 - AluSp SINE Alu 0 313 1 395 134 224 0 chr2 9397378 9397445 -243859138 + Tigger4(Zombi) DNA MER2_type 3 84 -2647 2317 120 78 12 chr2 9397447 9397694 -243858889 + Tigger4(Zombi) DNA MER2_type 2297 2583 -148 2467 60 0 0 chr2 9397694 9397978 -243858605 + AluY SINE Alu 1 284 -27 2317 120 78 12 chr2 9397978 9398138 -243858445 + Tigger4(Zombi) DNA MER2_type 2583 2731 0 2008 113 10 52 chr2 9398366 9398675 -243857908 - AluSx SINE Alu -16 296 1 2260 117 3 0 chr2 9398707 9399015 -243857568 + AluSx SINE Alu 1 309 -3 1757 147 51 17 chr2 9399633 9399926 -243856657 + AluJb SINE Alu 1 303 -9 2179 112 0 13 chr2 9400058 9400361 -243856222 - AluSg SINE Alu -11 299 1 204 309 32 11 chr2 9401006 9401100 -243855483 + L2 LINE L2 2599 2694 -620 1664 130 8 16 chr2 9401102 9401355 -243855228 - AluSx SINE Alu -16 296 46 1792 152 0 61 chr2 9401355 9401684 -243854899 - AluJo SINE Alu -3 309 1 225 263 150 0 chr2 9402112 9402192 -243854391 + L2 LINE L2 3216 3307 -6 229 175 0 62 chr2 9402270 9402350 -243854233 + A-rich Low_complexity Low_complexity 3 77 0 1917 129 11 4 chr2 9402458 9402737 -243853846 + AluSc SINE Alu 15 295 -14 336 327 47 57 chr2 9403237 9403330 -243853253 - L1ME4a LINE L1 -175 5946 5854 1955 149 0 13 chr2 9403330 9403638 -243852945 - AluJo SINE Alu -8 304 1 336 327 47 57 chr2 9403638 9403841 -243852742 - L1ME4a LINE L1 -267 5854 5653 2231 113 3 3 chr2 9403861 9404163 -243852420 - AluSq SINE Alu -11 302 1 894 231 16 0 chr2 9404167 9404353 -243852230 - MER5A DNA MER1_type 0 189 1 2198 94 3 7 chr2 9404608 9404905 -243851678 - AluSc SINE Alu -13 296 1 1880 113 60 0 chr2 9404926 9405192 -243851391 - AluSx SINE Alu -30 282 1 268 274 0 0 chr2 9405261 9405323 -243851260 - HAL1 LINE L1 -1868 639 578 1823 157 81 3 chr2 9405403 9405760 -243850823 - L1MA4 LINE L1 -1 6299 5915 1949 140 16 13 chr2 9406452 9406760 -243849823 + AluSx SINE Alu 1 309 -3 800 178 8 0 chr2 9407062 9407191 -243849392 - FLAM_C SINE Alu -3 130 1 1998 137 17 3 chr2 9407391 9407691 -243848892 - AluSx SINE Alu -8 304 1 2253 124 0 3 chr2 9407854 9408168 -243848415 - AluSq SINE Alu 0 313 1 1044 265 66 55 chr2 9408228 9408878 -243847705 - L1MC4a LINE L1 -743 5403 5175 409 263 85 0 chr2 9409056 9409174 -243847409 - MIR SINE MIR -133 129 2 275 329 110 21 chr2 9409521 9409717 -243846866 - MIR SINE MIR -48 214 4 2415 72 0 26 chr2 9410034 9410338 -243846245 + AluY SINE Alu 1 296 -15 883 73 0 33 chr2 9411421 9411572 -243845011 + (TCCCC)n Simple_repeat Simple_repeat 4 149 0 2137 87 45 0 chr2 9411710 9411997 -243844586 - AluY SINE Alu -11 300 1 383 298 17 36 chr2 9412074 9412230 -243844353 + MIR SINE MIR 12 161 -62 180 270 0 0 chr2 9412218 9412255 -243844328 + L2 LINE L2 3218 3254 -18 * 26 0 0 0 chr2 9413492 9413518 -243843065 + AT_rich Low_complexity Low_complexity 1 26 0 345 257 6 80 chr2 9414687 9414862 -243841721 - L1ME4a LINE L1 -109 6012 5851 1105 138 0 0 chr2 9414888 9415063 -243841520 - AluSg/x SINE Alu 0 308 134 2052 131 0 7 chr2 9415063 9415361 -243841222 - AluSc SINE Alu -13 296 1 291 200 158 11 chr2 9415534 9415629 -243840954 - MLT1J2 LTR MaLR -37 413 305 231 238 183 55 chr2 9415664 9415828 -243840755 - MLT1J1 LTR MaLR -239 207 23 2237 110 3 0 chr2 9415882 9416181 -243840402 - AluSc SINE Alu -9 300 1 2167 130 0 0 chr2 9416246 9416539 -243840044 - AluSg SINE Alu -17 293 1 1595 175 7 54 chr2 9416662 9416959 -243839624 + AluJo SINE Alu 1 283 -29 620 183 0 0 chr2 9417102 9417206 -243839377 + U13 snRNA snRNA 1 104 0 1513 183 13 50 chr2 9417331 9417632 -243838951 - AluJo SINE Alu -22 290 1 2251 114 0 0 chr2 9417730 9418028 -243838555 - AluSx SINE Alu -14 298 1 1066 104 0 0 chr2 9418028 9418162 -243838421 - AluSg SINE Alu -176 134 1 2110 138 0 0 chr2 9418195 9418493 -243838090 + AluSx SINE Alu 6 303 -9 517 290 36 44 chr2 9418606 9418854 -243837729 - L1MC4 LINE L1 -140 7902 7657 309 296 165 11 chr2 9418977 9419153 -243837430 - MIR SINE MIR -58 204 2 315 311 107 0 chr2 9419224 9419327 -243837256 + L3 LINE CR1 1461 1574 -3 3349 160 71 63 chr2 9419384 9419455 -243837128 - L1MB7 LINE L1 -9 6175 6106 207 0 0 0 chr2 9419455 9419478 -243837105 + (TG)n Simple_repeat Simple_repeat 2 24 0 1905 118 29 4 chr2 9419479 9419758 -243836825 - AluSx SINE Alu -25 287 2 3349 160 71 63 chr2 9419758 9419982 -243836601 - L1MB7 LINE L1 -78 6106 5885 2165 121 0 3 chr2 9419982 9420280 -243836303 - AluSx SINE Alu -15 297 1 3349 160 71 63 chr2 9420280 9420743 -243835840 - L1MB7 LINE L1 -299 5885 5408 365 261 59 17 chr2 9421073 9421192 -243835391 + L2 LINE L2 3190 3313 0 252 0 0 0 chr2 9422136 9422164 -243834419 + (TTTTG)n Simple_repeat Simple_repeat 3 30 0 1720 129 4 0 chr2 9422167 9422407 -243834176 - AluSx SINE Alu -71 241 1 30 69 0 0 chr2 9422420 9422478 -243834105 + AT_rich Low_complexity Low_complexity 1 58 0 1983 134 0 3 chr2 9422629 9422934 -243833649 - AluSx SINE Alu 0 304 1 1120 147 0 0 chr2 9424131 9424294 -243832289 - AluSg/x SINE Alu -13 299 137 1215 117 40 85 chr2 9424876 9424956 -243831627 - Tigger2a DNA MER2_type -2274 444 362 1359 177 89 7 chr2 9424956 9425227 -243831356 - AluJo SINE Alu -19 293 1 1215 117 40 85 chr2 9425227 9425393 -243831190 - Tigger2a DNA MER2_type -2356 362 209 944 172 17 22 chr2 9425393 9425573 -243831010 + AluJo SINE Alu 121 299 -13 1002 133 96 21 chr2 9425573 9425761 -243830822 - Tigger2a DNA MER2_type -232 202 1 23 0 0 0 chr2 9425783 9425806 -243830777 + AT_rich Low_complexity Low_complexity 1 23 0 269 216 49 59 chr2 9427203 9427305 -243829278 - L1MC4a LINE L1 -1906 5902 5802 252 0 0 0 chr2 9427578 9427606 -243828977 + (CAGG)n Simple_repeat Simple_repeat 4 31 0 22 0 0 0 chr2 9427906 9427928 -243828655 + AT_rich Low_complexity Low_complexity 1 22 0 189 0 0 0 chr2 9428548 9428569 -243828014 + (T)n Simple_repeat Simple_repeat 1 21 0 850 247 133 7 chr2 9429256 9429564 -243827019 - HAL1 LINE L1 -738 1769 1423 390 287 131 48 chr2 9429567 9430034 -243826549 - MLT1L LTR MaLR 0 615 6 1797 132 0 28 chr2 9430043 9430331 -243826252 - AluSx SINE Alu -2 310 31 257 245 0 0 chr2 9430369 9430438 -243826145 + L1MC1 LINE L1 5208 5276 -870 850 137 0 8 chr2 9430438 9430562 -243826021 + AluJb SINE Alu 1 123 -189 28 0 0 0 chr2 9430562 9430590 -243825993 + AT_rich Low_complexity Low_complexity 1 28 0 1738 124 30 65 chr2 9430594 9430760 -243825823 + L1MC1 LINE L1 5266 5415 -929 748 191 0 16 chr2 9430760 9430886 -243825697 + FLAM_A SINE Alu 1 124 -9 1738 124 30 65 chr2 9430886 9431058 -243825525 + L1MC1 LINE L1 5415 5592 -752 2399 93 10 0 chr2 9431061 9431371 -243825212 - AluSq SINE Alu 0 313 1 2293 149 95 2 chr2 9431375 9431798 -243824785 + L1MC1 LINE L1 5693 6154 -179 685 169 115 8 chr2 9431808 9431938 -243824645 + FAM SINE Alu 8 151 -34 1414 140 0 18 chr2 9431941 9432163 -243824420 - AluSg/x SINE Alu -19 291 74 2306 113 0 0 chr2 9432725 9433026 -243823557 - AluSx SINE Alu -11 301 1 553 249 166 16 chr2 9433128 9433321 -243823262 - MIR SINE MIR -37 225 4 254 253 46 46 chr2 9433345 9433432 -243823151 - L2 LINE L2 -19 3253 3167 2009 125 10 29 chr2 9433715 9434026 -243822557 - AluSq SINE Alu -8 305 1 209 228 0 35 chr2 9434295 9434352 -243822231 + G-rich Low_complexity Low_complexity 2 56 0 2343 102 0 3 chr2 9435032 9435337 -243821246 + AluSg SINE Alu 1 304 -6 2289 91 3 0 chr2 9435478 9435764 -243820819 - AluSp SINE Alu -26 287 1 564 221 69 35 chr2 9436211 9436356 -243820227 - MLT1E3 LTR MaLR -2 622 473 323 253 30 64 chr2 9436505 9436521 -243820062 - MIR SINE MIR -86 122 107 2195 170 15 15 chr2 9436521 9436910 -243819673 - MLT1B LTR MaLR -1 389 1 323 253 30 64 chr2 9436910 9437011 -243819572 - MIR SINE MIR -101 107 9 1742 146 42 17 chr2 9437247 9437534 -243819049 + AluJb SINE Alu 1 294 -18 180 0 0 0 chr2 9438164 9438184 -243818399 + (T)n Simple_repeat Simple_repeat 1 20 0 198 0 0 0 chr2 9438288 9438310 -243818273 + (A)n Simple_repeat Simple_repeat 1 22 0 1656 175 27 3 chr2 9438418 9438710 -243817873 + AluJo SINE Alu 14 312 0 200 277 75 32 chr2 9438883 9438977 -243817606 - L2 LINE L2 -27 3245 3148 427 274 101 48 chr2 9440083 9440291 -243816292 + MIR SINE MIR 6 224 -38 283 253 44 22 chr2 9440671 9440762 -243815821 + MIR SINE MIR 55 147 -61 1605 181 32 0 chr2 9441024 9441301 -243815282 - AluJb SINE Alu -20 292 7 2428 64 0 7 chr2 9441337 9441633 -243814950 - AluY SINE Alu -17 294 1 1001 180 41 23 chr2 9441874 9442046 -243814537 - FAM SINE Alu 0 175 1 1668 171 46 0 chr2 9442057 9442338 -243814245 - AluJb SINE Alu -18 294 1 1233 169 106 0 chr2 9442433 9442669 -243813914 - Tigger3(Golem) DNA MER2_type -8 3021 2761 2325 105 0 0 chr2 9442811 9443115 -243813468 + AluSq SINE Alu 1 304 -9 24 0 0 0 chr2 9443570 9443594 -243812989 + AT_rich Low_complexity Low_complexity 1 24 0 2253 97 6 39 chr2 9443939 9444114 -243812469 - AluSx SINE Alu 0 302 140 2121 125 7 10 chr2 9444114 9444281 -243812302 - AluSx SINE Alu -9 303 136 2130 115 0 7 chr2 9444281 9444576 -243812007 - AluSg SINE Alu -17 293 1 2121 125 7 10 chr2 9444576 9444712 -243811871 - AluSx SINE Alu -176 136 1 2253 97 6 39 chr2 9444712 9444847 -243811736 - AluSx SINE Alu -162 140 2 2422 79 3 16 chr2 9445063 9445380 -243811203 + AluSq SINE Alu 1 313 0 1817 166 46 0 chr2 9445635 9445960 -243810623 + MER47A DNA MER2_type 27 366 0 189 0 0 0 chr2 9447628 9447649 -243808934 + (CATA)n Simple_repeat Simple_repeat 4 24 0 1706 167 13 29 chr2 9447698 9448009 -243808574 + AluJo SINE Alu 1 306 -6 290 259 80 45 chr2 9448156 9448268 -243808315 + L3 LINE CR1 1238 1353 -224 2306 100 3 0 chr2 9450561 9450862 -243805721 + AluSq SINE Alu 1 302 -11 1563 173 26 48 chr2 9450898 9451210 -243805373 + AluJo SINE Alu 1 305 -7 1981 120 7 0 chr2 9451383 9451659 -243804924 + AluSp SINE Alu 10 287 -26 22 0 0 0 chr2 9451659 9451681 -243804902 + AT_rich Low_complexity Low_complexity 1 22 0 255 325 122 57 chr2 9453867 9454202 -243802381 - L2 LINE L2 0 3272 2916 404 245 0 10 chr2 9454233 9454335 -243802248 + MER5C DNA MER1_type 55 155 -169 2266 101 3 3 chr2 9454516 9454822 -243801761 + AluSg SINE Alu 1 306 -4 380 252 56 0 chr2 9454877 9454984 -243801599 + MIR SINE MIR 149 261 -1 1943 85 114 7 chr2 9455309 9455581 -243801002 - AluSg SINE Alu -9 301 1 1522 148 13 62 chr2 9455625 9455930 -243800653 + AluJo SINE Alu 15 304 -8 40 37 0 0 chr2 9455942 9455996 -243800587 + AT_rich Low_complexity Low_complexity 1 54 0 180 0 0 0 chr2 9455996 9456016 -243800567 + (CA)n Simple_repeat Simple_repeat 2 21 0 255 61 0 0 chr2 9456049 9456082 -243800501 + (CA)n Simple_repeat Simple_repeat 2 34 0 21 36 0 0 chr2 9456324 9456352 -243800231 + AT_rich Low_complexity Low_complexity 1 28 0 22 56 0 0 chr2 9457386 9457422 -243799161 + AT_rich Low_complexity Low_complexity 1 36 0 2086 129 24 0 chr2 9457495 9457790 -243798793 + AluSq SINE Alu 1 302 -11 780 177 44 19 chr2 9458773 9458931 -243797652 - AluSg/x SINE Alu -13 297 136 412 238 0 0 chr2 9458930 9459014 -243797569 - FRAM/FAM SINE Alu -101 84 1 * 2101 87 50 3 chr2 9459436 9459735 -243796848 + AluSq SINE Alu 1 313 0 2146 83 6 92 chr2 9459861 9460188 -243796395 - AluSq SINE Alu -14 299 1 2171 117 7 0 chr2 9460205 9460513 -243796070 - AluSx SINE Alu -1 311 2 417 273 43 50 chr2 9461557 9461696 -243794887 + MIR SINE MIR 2 139 -123 279 265 53 53 chr2 9462109 9462241 -243794342 + MIR SINE MIR 16 147 -61 1605 181 32 0 chr2 9462503 9462780 -243793803 - AluJb SINE Alu -20 292 7 2428 64 0 7 chr2 9462816 9463112 -243793471 - AluY SINE Alu -17 294 1 1001 180 41 23 chr2 9463353 9463525 -243793058 - FAM SINE Alu 0 175 1 1724 164 46 0 chr2 9463536 9463817 -243792766 - AluJb SINE Alu -18 294 1 1233 169 106 0 chr2 9463912 9464148 -243792435 - Tigger3(Golem) DNA MER2_type -7 3022 2762 2325 105 0 0 chr2 9464290 9464594 -243791989 + AluSq SINE Alu 1 304 -9 24 0 0 0 chr2 9465049 9465073 -243791510 + AT_rich Low_complexity Low_complexity 1 24 0 1990 98 59 0 chr2 9465416 9465703 -243790880 - AluSx SINE Alu -8 304 1 4249 146 38 122 chr2 9465747 9466154 -243790429 - MER21A LTR ERV1 -6 925 485 2179 108 27 0 chr2 9466154 9466449 -243790134 + AluSx SINE Alu 1 303 -9 4249 146 38 122 chr2 9466449 9467038 -243789545 - MER21A LTR ERV1 -446 485 13 1894 125 7 4 chr2 9467446 9467759 -243788824 - AluSq SINE Alu 0 314 1 2317 98 0 3 chr2 9467981 9468276 -243788307 - AluSq SINE Alu -14 299 6 1601 175 0 52 chr2 9468610 9468765 -243787818 - AluJo SINE Alu -24 288 153 2463 80 0 0 chr2 9468765 9469064 -243787519 - AluSg SINE Alu -11 299 1 1601 175 0 52 chr2 9469064 9469194 -243787389 - AluJo SINE Alu -159 153 18 286 218 154 13 chr2 9469940 9470018 -243786565 + L2 LINE L2 3184 3272 0 702 158 79 20 chr2 9470678 9470830 -243785753 + MER3 DNA MER1_type 1 161 -48 586 307 20 0 chr2 9470830 9471032 -243785551 + L1MB7 LINE L1 5970 6175 -9 339 232 11 21 chr2 9471102 9471197 -243785386 + L1MC5 LINE L1 7824 7917 -44 297 125 0 0 chr2 9471226 9471266 -243785317 + MER3 DNA MER1_type 160 199 -10 1845 166 27 0 chr2 9471441 9471736 -243784847 + AluJb SINE Alu 6 308 -4 27 0 0 0 chr2 9471912 9471939 -243784644 + AT_rich Low_complexity Low_complexity 1 27 0 2044 100 7 43 chr2 9471941 9472240 -243784343 - AluSx SINE Alu -24 288 1 1629 81 5 0 chr2 9472784 9472982 -243783601 + AluSc SINE Alu 1 199 -110 2306 100 3 0 chr2 9475226 9475527 -243781056 + AluSq SINE Alu 1 302 -11 1450 182 28 48 chr2 9475563 9475854 -243780729 + AluJo SINE Alu 1 285 -27 1981 120 7 0 chr2 9476046 9476322 -243780261 + AluSp SINE Alu 10 287 -26 22 0 0 0 chr2 9476322 9476344 -243780239 + AT_rich Low_complexity Low_complexity 1 22 0 255 325 122 57 chr2 9478530 9478865 -243777718 - L2 LINE L2 0 3272 2916 404 245 0 10 chr2 9478896 9478998 -243777585 + MER5C DNA MER1_type 55 155 -169 2266 101 3 3 chr2 9479179 9479485 -243777098 + AluSg SINE Alu 1 306 -4 391 243 56 0 chr2 9479540 9479647 -243776936 + MIR SINE MIR 149 261 -1 180 0 0 0 chr2 9479972 9479992 -243776591 + (T)n Simple_repeat Simple_repeat 1 20 0 1711 66 0 0 chr2 9480044 9480242 -243776341 - AluSc SINE Alu -109 200 3 997 124 0 0 chr2 9480367 9480496 -243776087 - FLAM_C SINE Alu 0 133 5 1888 152 0 20 chr2 9481048 9481344 -243775239 - AluSx SINE Alu -22 290 1 815 161 101 8 chr2 9481353 9481532 -243775051 - L1MD3 LINE L1 0 7995 7834 2193 112 7 0 chr2 9481532 9481828 -243774755 - AluSx SINE Alu -14 298 1 815 161 101 8 chr2 9481828 9481855 -243774728 - L1MD3 LINE L1 -161 7834 7562 1587 124 98 23 chr2 9481876 9482142 -243774441 + AluJo SINE Alu 1 286 -26 792 170 146 24 chr2 9482159 9482371 -243774212 - L1MB5 LINE L1 -2 6172 5935 461 148 44 23 chr2 9482343 9482432 -243774151 - L1MD3 LINE L1 -201 7794 7621 * 1827 121 4 0 chr2 9482465 9482714 -243773869 + AluSx SINE Alu 1 250 -62 1780 174 56 25 chr2 9483182 9483574 -243773009 + MLT1C LTR MaLR 12 415 -52 1799 137 6 37 chr2 9483593 9483915 -243772668 - AluJb SINE Alu 0 312 1 708 145 120 0 chr2 9485407 9485524 -243771059 + FLAM_C SINE Alu 1 131 -2 247 300 22 22 chr2 9485540 9485630 -243770953 + L1ME LINE L1 5558 5647 -474 2357 86 0 22 chr2 9485751 9486065 -243770518 - AluSq SINE Alu -6 307 1 247 264 57 89 chr2 9487296 9487576 -243769007 - L1M4 LINE L1 -644 5534 5264 374 279 107 62 chr2 9487810 9488054 -243768529 - L1M4 LINE L1 -3638 2508 2254 3772 172 41 20 chr2 9488070 9488775 -243767808 - L1MB8 LINE L1 0 6178 5459 2507 62 0 3 chr2 9488954 9489258 -243767325 + AluY SINE Alu 1 303 -8 231 114 0 0 chr2 9489526 9489561 -243767022 + (A)n Simple_repeat Simple_repeat 1 35 0 736 219 12 19 chr2 9489578 9489738 -243766845 + MER5A DNA MER1_type 28 186 -3 213 342 26 51 chr2 9489818 9489935 -243766648 - L2 LINE L2 -10 3262 3149 1698 171 3 13 chr2 9490324 9490628 -243765955 + AluJo SINE Alu 1 301 -11 234 311 185 44 chr2 9490630 9491113 -243765470 - L2 LINE L2 0 3313 2760 1947 123 7 20 chr2 9491727 9492027 -243764556 - AluSx SINE Alu -16 296 1 386 69 103 0 chr2 9496720 9496778 -243759805 - MADE1 DNA Mariner -15 65 2 1226 22 0 0 chr2 9497650 9497788 -243758795 - L1PA5 LINE L1 -271 5883 5746 2237 94 19 7 chr2 9497859 9498168 -243758415 - AluSq SINE Alu 0 313 1 1755 108 44 4 chr2 9498843 9499093 -243757490 + AluSx SINE Alu 18 277 -35 252 0 0 0 chr2 9499097 9499125 -243757458 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 576 247 149 39 chr2 9499491 9500090 -243756493 + L1MEd LINE L1 991 1641 -4488 482 203 163 0 chr2 9500449 9500572 -243756011 + MIR SINE MIR 104 245 -17 2259 97 3 0 chr2 9500675 9500965 -243755618 - AluSp SINE Alu -22 291 1 21 0 0 0 chr2 9500970 9500991 -243755592 + AT_rich Low_complexity Low_complexity 1 21 0 1896 127 11 7 chr2 9501837 9502121 -243754462 - AluSx SINE Alu -23 289 5 759 57 67 9 chr2 9505423 9505528 -243751055 + HY1 scRNA scRNA 1 111 -1 183 264 287 0 chr2 9505968 9506055 -243750528 + MIR SINE MIR 20 131 -131 866 195 99 22 chr2 9506230 9507088 -243749495 + L1M3 LINE L1 4765 5763 -420 180 0 0 0 chr2 9507109 9507129 -243749454 + (TTTTG)n Simple_repeat Simple_repeat 5 24 0 898 152 96 63 chr2 9507261 9507531 -243749052 + L1MB3 LINE L1 5108 5386 -760 2170 153 112 49 chr2 9507553 9507787 -243748796 + L1MB3 LINE L1 5499 5717 -457 2281 73 0 7 chr2 9507787 9508095 -243748488 - AluY SINE Alu 0 306 1 2170 153 112 49 chr2 9508095 9508473 -243748110 + L1MB3 LINE L1 5717 6173 -1 1713 166 42 3 chr2 9508490 9508774 -243747809 + AluJo SINE Alu 1 295 -17 2295 100 0 3 chr2 9509368 9509677 -243746906 + AluY SINE Alu 1 308 -3 2097 117 7 32 chr2 9509874 9510183 -243746400 + AluSg SINE Alu 2 302 -8 2302 88 10 0 chr2 9510200 9510497 -243746086 + AluSg SINE Alu 1 300 -10 1428 113 0 0 chr2 9510643 9510838 -243745745 + AluSg/x SINE Alu 94 288 -24 321 255 43 11 chr2 9510849 9510943 -243745640 + L1MC4a LINE L1 5376 5472 -2336 198 0 0 0 chr2 9510943 9510965 -243745618 + (TTTTTA)n Simple_repeat Simple_repeat 2 23 0 885 130 23 0 chr2 9510965 9511096 -243745487 - AluSq/x SINE Alu -179 134 1 324 249 37 21 chr2 9511109 9511224 -243745359 + L1MC4a LINE L1 5475 5591 -530 439 285 75 31 chr2 9511247 9511475 -243745108 + L1MC4a LINE L1 5705 5942 -1866 1909 145 3 6 chr2 9511518 9511829 -243744754 + AluSx SINE Alu 1 310 -2 1831 161 17 7 chr2 9511948 9512246 -243744337 + AluJb SINE Alu 5 305 -7 227 170 106 0 chr2 9512423 9512470 -243744113 - L2 LINE L2 -5 3267 3216 743 278 0 0 chr2 9512601 9512774 -243743809 + MER8 DNA MER2_type 5 177 -62 330 200 46 0 chr2 9512803 9512868 -243743715 + MER8 DNA MER2_type 172 239 0 26 0 0 0 chr2 9513179 9513205 -243743378 + AT_rich Low_complexity Low_complexity 1 26 0 676 208 129 102 chr2 9513256 9513442 -243743141 + MER20B DNA MER1_type 83 262 -521 1899 148 3 10 chr2 9513442 9513739 -243742844 - AluSx SINE Alu -17 295 1 676 208 129 102 chr2 9513739 9513805 -243742778 + MER20B DNA MER1_type 262 347 -436 2088 128 0 16 chr2 9513805 9514109 -243742474 + AluSx SINE Alu 1 299 -13 676 208 129 102 chr2 9514109 9514149 -243742434 + MER20B DNA MER1_type 347 384 -399 417 239 7 49 chr2 9514466 9514608 -243741975 + FLAM_C SINE Alu 8 143 0 288 0 0 0 chr2 9514622 9514654 -243741929 + (T)n Simple_repeat Simple_repeat 1 32 0 1278 166 67 24 chr2 9514660 9514913 -243741670 + AluJo SINE Alu 6 269 -43 1549 190 45 3 chr2 9515049 9515339 -243741244 - AluJo SINE Alu -10 302 1 2056 121 7 14 chr2 9515536 9515833 -243740750 + AluSx SINE Alu 1 295 -17 2150 107 10 23 chr2 9515995 9516304 -243740279 - AluSq SINE Alu -8 305 1 14161 129 35 26 chr2 9516397 9516749 -243739834 - Tigger1 DNA MER2_type -18 2400 2053 2373 100 7 0 chr2 9516749 9517059 -243739524 - AluSp SINE Alu -1 312 1 14161 129 35 26 chr2 9517059 9519085 -243737498 - Tigger1 DNA MER2_type -365 2053 1 988 89 16 0 chr2 9519352 9519475 -243737108 + AluSp SINE Alu 1 125 -188 1737 161 94 16 chr2 9519613 9519985 -243736598 + L1MB3 LINE L1 5773 6173 -10 1770 169 42 0 chr2 9520008 9520292 -243736291 + AluJo SINE Alu 1 296 -16 1615 178 44 0 chr2 9520292 9520613 -243735970 + L1MB7 LINE L1 5827 6161 -23 1349 191 25 48 chr2 9520851 9521165 -243735418 - AluJb SINE Alu -5 307 1 630 190 0 0 chr2 9521813 9521929 -243734654 + AluSg/x SINE Alu 194 309 0 35 0 0 0 chr2 9521939 9521974 -243734609 + AT_rich Low_complexity Low_complexity 1 35 0 565 203 79 57 chr2 9523297 9523474 -243733109 + Charlie1b DNA MER1_type 11 191 -332 1483 198 100 35 chr2 9523950 9524062 -243732521 - L1ME2 LINE L1 0 6164 6061 3834 62 4 0 chr2 9524062 9524549 -243732034 + L1PA7 LINE L1 5666 6154 0 1483 198 100 35 chr2 9524549 9524946 -243731637 - L1ME2 LINE L1 -103 6061 5622 276 210 70 20 chr2 9524968 9525068 -243731515 - L1MC5 LINE L1 -52 7909 7805 318 275 211 28 chr2 9525605 9525747 -243730836 + L1ME LINE L1 5493 5660 -461 2217 99 7 0 chr2 9525843 9526151 -243730432 + AluSp SINE Alu 1 310 0 1858 144 46 0 chr2 9526338 9526622 -243729961 + AluJb SINE Alu 1 297 -15 634 232 49 22 chr2 9526843 9527028 -243729555 - MER20 DNA MER1_type 0 219 30 2138 110 14 7 chr2 9527103 9527395 -243729188 - AluSx SINE Alu -18 294 1 1421 107 0 5 chr2 9527440 9527627 -243728956 + AluSg/x SINE Alu 111 296 -16 676 279 109 5 chr2 9527907 9528108 -243728475 + MIR SINE MIR 37 258 -4 296 300 128 28 chr2 9528094 9528274 -243728309 - MIR SINE MIR -58 204 7 * 2201 95 17 7 chr2 9528788 9529082 -243727501 - AluSx SINE Alu -15 297 1 639 198 33 0 chr2 9529908 9530029 -243726554 + FLAM_C SINE Alu 9 133 -10 368 257 57 86 chr2 9530307 9530482 -243726101 + L2 LINE L2 3122 3291 -22 28 0 0 0 chr2 9532804 9532832 -243723751 + GC_rich Low_complexity Low_complexity 1 28 0 28 0 0 0 chr2 9533634 9533662 -243722921 + GC_rich Low_complexity Low_complexity 1 28 0 27 92 0 0 chr2 9533886 9533962 -243722621 + GC_rich Low_complexity Low_complexity 1 76 0 186 233 0 0 chr2 9536046 9536089 -243720494 + MIR SINE MIR 85 127 -135 909 247 20 51 chr2 9536314 9536569 -243720014 - MIR SINE MIR -3 259 13 371 305 93 55 chr2 9536820 9536957 -243719626 + MIR SINE MIR 15 160 -102 1872 160 3 7 chr2 9536957 9537245 -243719338 + AluJb SINE Alu 1 287 -25 371 305 93 55 chr2 9537245 9537346 -243719237 + MIR SINE MIR 160 256 -6 1045 238 47 63 chr2 9537862 9537985 -243718598 + MLT2C2 LTR ERVL 2 125 -339 2364 109 0 0 chr2 9537985 9538288 -243718295 - AluSx SINE Alu -9 303 1 1045 238 47 63 chr2 9538288 9538593 -243717990 + MLT2C2 LTR ERVL 125 423 -41 2246 121 0 3 chr2 9538682 9538980 -243717603 - AluSx SINE Alu -15 297 1 210 37 0 0 chr2 9539076 9539103 -243717480 + (TTTG)n Simple_repeat Simple_repeat 3 29 0 212 340 123 9 chr2 9539145 9539251 -243717332 - MIR SINE MIR -108 154 37 318 262 78 10 chr2 9539945 9540048 -243716535 - L2 LINE L2 -4 3309 3200 824 219 45 28 chr2 9541157 9541335 -243715248 + MIR SINE MIR 2 182 -80 297 351 71 51 chr2 9541383 9541733 -243714850 + L2 LINE L2 2916 3272 0 589 262 48 114 chr2 9542875 9543444 -243713139 - LTR67 LTR ERVL -8 549 19 236 242 253 33 chr2 9543788 9543879 -243712704 - L2 LINE L2 0 3272 3162 186 322 111 30 chr2 9543913 9544112 -243712471 - L2 LINE L2 -264 3049 2835 2368 81 3 3 chr2 9544136 9544434 -243712149 + AluSg SINE Alu 1 298 -12 894 135 0 8 chr2 9544516 9544649 -243711934 - FLAM_C SINE Alu -1 132 1 1300 139 17 13 chr2 9544743 9544973 -243711610 - L1MB3 LINE L1 -2 6181 5951 2376 116 0 0 chr2 9545210 9545521 -243711062 - AluSx SINE Alu -1 311 1 501 264 184 20 chr2 9545880 9546081 -243710502 + MIR SINE MIR 23 256 -6 2454 87 0 0 chr2 9546163 9546473 -243710110 - AluY SINE Alu -1 310 1 1170 46 0 0 chr2 9546476 9546607 -243709976 - AluY SINE Alu -179 132 2 243 292 15 15 chr2 9547629 9547694 -243708889 + L2 LINE L2 3237 3301 -12 2613 56 0 0 chr2 9549053 9549355 -243707228 + AluY SINE Alu 1 302 -9 260 240 56 64 chr2 9549662 9549787 -243706796 + L2 LINE L2 3137 3260 -12 385 306 68 88 chr2 9550197 9550606 -243705977 - L2 LINE L2 -46 3226 2826 449 290 16 24 chr2 9550804 9550928 -243705655 - MIR SINE MIR -63 145 23 320 333 26 0 chr2 9551751 9551865 -243704718 + MIR SINE MIR 4 120 -142 21 0 0 0 chr2 9551865 9551886 -243704697 + AT_rich Low_complexity Low_complexity 1 21 0 502 186 41 10 chr2 9551907 9552004 -243704579 + MER33 DNA MER1_type 10 109 -215 470 290 101 63 chr2 9552238 9552476 -243704107 + MIR SINE MIR 16 262 0 251 259 0 0 chr2 9552716 9552770 -243703813 - LTR33 LTR ERVL -358 163 110 1303 133 282 0 chr2 9552770 9553011 -243703572 + AluSg1 SINE Alu 1 309 0 2374 119 0 0 chr2 9553028 9553340 -243703243 + AluSx SINE Alu 1 312 0 326 243 19 19 chr2 9553340 9553440 -243703143 - LTR33 LTR ERVL -398 123 21 564 332 21 0 chr2 9553459 9553646 -243702937 + MIR3 SINE MIR 5 195 -13 1594 177 141 52 chr2 9553654 9554139 -243702444 + L1MB7 LINE L1 5359 5889 -295 7117 58 9 1 chr2 9554150 9555044 -243701539 + L1PA5 LINE L1 5254 6154 0 436 289 31 0 chr2 9555136 9555295 -243701288 + LTR33 LTR ERVL 304 467 -54 1188 141 3 0 chr2 9555341 9555726 -243700857 + (TCCA)n Simple_repeat Simple_repeat 1 386 0 213 205 0 0 chr2 9555739 9555778 -243700805 + (TCCA)n Simple_repeat Simple_repeat 1 39 0 220 267 95 103 chr2 9555815 9555931 -243700652 - L2 LINE L2 -8 3264 3150 222 118 0 0 chr2 9555976 9556010 -243700573 + (GAAAA)n Simple_repeat Simple_repeat 2 35 0 321 282 70 5 chr2 9557017 9557182 -243699401 + MIR SINE MIR 16 191 -63 191 286 143 0 chr2 9557251 9557307 -243699276 + MIR SINE MIR 87 150 -58 186 43 0 0 chr2 9557746 9557769 -243698814 + (CAGCC)n Simple_repeat Simple_repeat 1 23 0 270 250 45 0 chr2 9557833 9557921 -243698662 + CT-rich Low_complexity Low_complexity 4 95 0 635 253 125 108 chr2 9558001 9558203 -243698380 + L3 LINE CR1 1083 1280 -297 1906 134 10 7 chr2 9558203 9558493 -243698090 + AluSx SINE Alu 1 291 -21 635 253 125 108 chr2 9558493 9558761 -243697822 + L3 LINE CR1 1280 1561 -16 2284 117 3 3 chr2 9559217 9559525 -243697058 + AluSg SINE Alu 1 308 -2 1728 145 89 3 chr2 9559852 9560134 -243696449 + AluSx SINE Alu 1 306 -6 640 197 50 67 chr2 9561348 9561587 -243694996 - L1MC5 LINE L1 -64 7897 7663 1784 148 42 0 chr2 9561638 9561901 -243694682 - AluJo SINE Alu -38 274 1 414 283 47 57 chr2 9561901 9562193 -243694390 - L1MC5 LINE L1 -305 7656 7366 440 256 34 68 chr2 9562363 9562407 -243694176 + LTR16C LTR ERVL 167 211 -280 1974 149 3 3 chr2 9562407 9562727 -243693856 + AluJb SINE Alu 1 312 0 2294 110 0 0 chr2 9562735 9563021 -243693562 + AluSx SINE Alu 1 287 -20 192 40 0 0 chr2 9563021 9563046 -243693537 + (CA)n Simple_repeat Simple_repeat 2 26 0 440 256 34 68 chr2 9563051 9563173 -243693410 + LTR16C LTR ERVL 218 336 -155 23 0 0 0 chr2 9563188 9563211 -243693372 + AT_rich Low_complexity Low_complexity 1 23 0 361 261 104 8 chr2 9563273 9563407 -243693176 + LTR16C LTR ERVL 345 491 0 183 188 0 0 chr2 9563999 9564047 -243692536 + (TG)n Simple_repeat Simple_repeat 2 49 0 253 324 36 36 chr2 9564235 9564346 -243692237 + MIR SINE MIR 41 151 -111 356 202 9 64 chr2 9564550 9564659 -243691924 - LTR67 LTR ERVL -22 535 433 1837 159 0 21 chr2 9564879 9565162 -243691421 - AluJb SINE Alu -30 282 6 415 277 150 58 chr2 9565427 9565476 -243691107 + L1ME4a LINE L1 5772 5815 -306 2445 87 0 0 chr2 9565476 9565774 -243690809 - AluSx SINE Alu -14 298 1 415 277 150 58 chr2 9565774 9565984 -243690599 + L1ME4a LINE L1 5815 6055 -66 193 292 79 11 chr2 9568019 9568108 -243688475 + L2 LINE L2 2664 2758 -556 2400 107 0 3 chr2 9568610 9568920 -243687663 + AluSg SINE Alu 1 309 -1 2244 112 0 3 chr2 9570111 9570415 -243686168 + AluSx SINE Alu 1 303 -9 1886 114 0 8 chr2 9571343 9571645 -243684938 - AluSx SINE Alu 0 312 30 2320 69 7 33 chr2 9572795 9573101 -243683482 - AluY SINE Alu -13 298 1 2294 112 3 10 chr2 9573169 9573483 -243683100 - AluSx SINE Alu 0 312 1 2327 86 14 0 chr2 9574012 9574304 -243682279 + AluSx SINE Alu 1 296 -16 1946 159 14 0 chr2 9574403 9574699 -243681884 + AluJo SINE Alu 1 300 -12 5156 135 94 23 chr2 9574754 9575325 -243681258 - L1MC1 LINE L1 -9 6324 5795 2221 108 3 16 chr2 9575325 9575630 -243680953 - AluSx SINE Alu -11 301 1 5156 135 94 23 chr2 9575630 9575961 -243680622 - L1MC1 LINE L1 -538 5795 5489 2344 108 0 0 chr2 9575961 9576257 -243680326 - AluSx SINE Alu -16 296 1 5156 135 94 23 chr2 9576257 9576434 -243680149 - L1MC1 LINE L1 -844 5489 5167 2149 152 0 0 chr2 9576434 9576731 -243679852 + AluSx SINE Alu 1 297 -15 1355 153 80 90 chr2 9576780 9577081 -243679502 + AluJo SINE Alu 1 298 -14 265 232 0 61 chr2 9577253 9577335 -243679248 - MIR SINE MIR -116 92 16 1346 43 0 0 chr2 9577620 9577804 -243678779 + L1PA4 LINE L1 5983 6166 0 546 176 235 0 chr2 9578249 9578402 -243678181 - MER53 DNA DNA 0 189 1 198 323 125 67 chr2 9579406 9579719 -243676864 + L2 LINE L2 2921 3251 -21 937 189 13 13 chr2 9579976 9580135 -243676448 - FRAM SINE Alu -15 161 3 1922 134 38 3 chr2 9580149 9580439 -243676144 - AluSx SINE Alu -12 300 1 571 293 109 66 chr2 9580488 9580621 -243675962 - L1ME4a LINE L1 -296 5825 5699 2348 100 0 13 chr2 9580621 9580931 -243675652 - AluSx SINE Alu -6 306 1 571 293 109 66 chr2 9580931 9581343 -243675240 - L1ME4a LINE L1 -422 5699 5234 384 77 0 0 chr2 9581343 9581395 -243675188 + (TA)n Simple_repeat Simple_repeat 1 52 0 571 293 109 66 chr2 9581395 9581512 -243675071 - L1ME4a LINE L1 -887 5234 5124 24 0 0 0 chr2 9581616 9581640 -243674943 + AT_rich Low_complexity Low_complexity 1 24 0 2157 135 52 17 chr2 9581746 9582108 -243674475 - THE1C LTR MaLR 0 375 1 2187 152 28 6 chr2 9582212 9582567 -243674016 + MLT1A1 LTR MaLR 3 365 0 1631 162 65 23 chr2 9583083 9583391 -243673192 - MLT1A1 LTR MaLR 0 365 45 1224 161 55 14 chr2 9583391 9583749 -243672834 + LTR47A LTR ERVL 1 452 0 318 85 0 21 chr2 9583752 9583799 -243672784 - MLT1A1 LTR MaLR -328 46 1 381 309 54 46 chr2 9583850 9584078 -243672505 - MIR SINE MIR -17 245 16 1851 158 13 17 chr2 9584204 9584502 -243672081 + AluJb SINE Alu 1 297 -15 2279 79 9 32 chr2 9584920 9585235 -243671348 + AluSx SINE Alu 1 308 -4 180 125 0 0 chr2 9585279 9585311 -243671272 + (CA)n Simple_repeat Simple_repeat 1 32 0 2062 153 3 3 chr2 9585468 9585776 -243670807 - AluJb SINE Alu -4 308 1 3593 208 68 19 chr2 9585805 9586498 -243670085 + Charlie1a DNA MER1_type 5 755 -2006 2321 105 0 3 chr2 9586498 9586803 -243669780 - AluSq SINE Alu -9 304 1 3593 208 68 19 chr2 9586803 9587028 -243669555 + Charlie1a DNA MER1_type 755 968 -487 1994 111 61 0 chr2 9587029 9587308 -243669275 - AluSq SINE Alu -17 296 1 900 169 144 88 chr2 9587314 9587503 -243669080 + Charlie1a DNA MER1_type 1077 1254 -1507 1721 165 0 4 chr2 9587503 9587770 -243668813 - AluJb SINE Alu -45 267 2 900 169 144 88 chr2 9587770 9587934 -243668649 + Charlie1a DNA MER1_type 1254 1450 -5 281 279 177 44 chr2 9588307 9588421 -243668162 + MER5A DNA MER1_type 11 153 -36 2078 114 7 36 chr2 9588421 9588728 -243667855 + AluSx SINE Alu 1 298 -14 281 279 177 44 chr2 9588728 9588771 -243667812 + MER5A DNA MER1_type 153 189 0 1967 147 39 74 chr2 9589096 9589634 -243666949 - MER51A LTR ERV1 0 640 1 689 335 99 16 chr2 9589882 9590640 -243665943 + L1MEc LINE L1 1000 1820 -4576 310 335 58 36 chr2 9590758 9590982 -243665601 + L1MEc LINE L1 1940 2168 -4047 911 222 6 11 chr2 9590988 9591164 -243665419 + FAM SINE Alu 1 175 0 302 217 170 34 chr2 9591182 9591216 -243665367 - L1MC5 LINE L1 -36 7925 7897 1455 202 6 42 chr2 9591216 9591528 -243665055 + AluJo SINE Alu 1 301 -11 302 217 170 34 chr2 9591528 9591728 -243664855 - L1MC5 LINE L1 -64 7897 7659 414 299 77 58 chr2 9591728 9591787 -243664796 + L1MEc LINE L1 2181 2237 -3978 2126 140 10 0 chr2 9591787 9592095 -243664488 - AluSx SINE Alu -1 311 1 414 299 77 58 chr2 9592095 9592242 -243664341 + L1MEc LINE L1 2237 2391 -3824 1349 142 124 11 chr2 9592355 9592622 -243663961 - AluJo SINE Alu 0 312 16 1798 68 5 5 chr2 9592905 9593124 -243663459 + AluSp SINE Alu 1 219 -94 825 98 0 49 chr2 9593124 9593246 -243663337 + AluSp/q SINE Alu 188 303 -10 210 37 0 0 chr2 9593932 9593959 -243662624 + (CA)n Simple_repeat Simple_repeat 2 28 0 296 114 0 0 chr2 9594204 9594248 -243662335 + U5 snRNA snRNA 8 51 -65 314 244 344 6 chr2 9594346 9594526 -243662057 + MIR SINE MIR 21 261 -1 2385 97 13 0 chr2 9594941 9595249 -243661334 - AluSx SINE Alu 0 312 1 210 260 26 39 chr2 9596241 9596318 -243660265 + MIR3 SINE MIR 128 203 -5 189 231 0 0 chr2 9596711 9596750 -243659833 + MIR SINE MIR 91 129 -79 2278 110 0 10 chr2 9597419 9597728 -243658855 - AluSx SINE Alu -6 306 1 1402 147 107 20 chr2 9598331 9598583 -243658000 - AluJb SINE Alu -6 306 33 301 283 44 75 chr2 9598583 9598639 -243657944 - HAL1 LINE L1 -137 2370 2314 2037 93 41 10 chr2 9598639 9598930 -243657653 - AluSq SINE Alu -13 300 1 301 283 44 75 chr2 9598930 9599032 -243657551 - HAL1 LINE L1 -193 2314 2217 2237 157 95 17 chr2 9599050 9599471 -243657112 - LTR32 LTR ERVL -6 465 12 1766 286 54 26 chr2 9599483 9600156 -243656427 - HAL1 LINE L1 -310 2197 1497 2039 143 20 3 chr2 9600156 9600457 -243656126 + AluSx SINE Alu 1 306 -6 1766 286 54 26 chr2 9600457 9600580 -243656003 - HAL1 LINE L1 -1010 1497 1379 993 285 124 14 chr2 9600613 9601119 -243655464 - HAL1 LINE L1 -1832 675 114 240 224 0 0 chr2 9601119 9601186 -243655397 + (TG)n Simple_repeat Simple_repeat 1 67 0 247 265 88 0 chr2 9601186 9601254 -243655329 - HAL1 LINE L1 -2421 86 13 373 243 21 104 chr2 9601834 9601898 -243654685 - MIR3 SINE MIR 0 208 140 280 81 0 0 chr2 9601898 9601935 -243654648 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 2110 90 25 11 chr2 9601937 9602214 -243654369 - AluSq SINE Alu -32 281 1 373 243 21 104 chr2 9602214 9602290 -243654293 - MIR3 SINE MIR -69 139 77 307 313 61 17 chr2 9603141 9603256 -243653327 + MIR SINE MIR 31 150 -112 325 285 65 32 chr2 9603327 9603450 -243653133 + MIR3 SINE MIR 71 197 -11 217 372 11 11 chr2 9603456 9603550 -243653033 + MER5A DNA MER1_type 7 100 -89 307 254 106 35 chr2 9603631 9603773 -243652810 + L1M4 LINE L1 3044 3195 -2951 232 259 86 0 chr2 9603908 9603966 -243652617 + MIR SINE MIR 88 150 -112 325 285 65 32 chr2 9604037 9604160 -243652423 + MIR3 SINE MIR 71 197 -11 240 362 11 11 chr2 9604166 9604260 -243652323 + MER5A DNA MER1_type 7 100 -89 186 302 39 116 chr2 9604389 9604518 -243652065 + L2 LINE L2 2606 2724 -590 836 281 117 12 chr2 9604850 9605426 -243651157 - L1ME LINE L1 -357 5813 5175 227 309 46 26 chr2 9605501 9605653 -243650930 + L1M4 LINE L1 4786 4940 -1206 380 322 0 8 chr2 9605653 9605771 -243650812 - L1ME LINE L1 -981 5165 5049 568 255 77 16 chr2 9605857 9606104 -243650479 - L1ME LINE L1 -1098 5048 4787 392 312 105 75 chr2 9606314 9606609 -243649974 + L2 LINE L2 2883 3186 -86 593 264 156 26 chr2 9606684 9606915 -243649668 - MIR SINE MIR 0 262 2 209 309 24 57 chr2 9607638 9607761 -243648822 + MIR SINE MIR 11 129 -79 2462 78 3 0 chr2 9608122 9608429 -243648154 + AluY SINE Alu 1 308 -3 2775 102 3 0 chr2 9609109 9609472 -243647111 + THE1B LTR MaLR 1 364 0 299 185 34 134 chr2 9609547 9609666 -243646917 - MER20B DNA MER1_type -675 108 2 1894 97 89 4 chr2 9609684 9609975 -243646608 + AluSc SINE Alu 1 313 0 281 193 125 23 chr2 9610006 9610094 -243646489 - L2 LINE L2 -14 3299 3203 186 43 0 0 chr2 9611018 9611041 -243645542 + (TG)n Simple_repeat Simple_repeat 2 24 0 2281 92 7 3 chr2 9611283 9611577 -243645006 + AluSx SINE Alu 1 295 -17 411 214 296 0 chr2 9611828 9612034 -243644549 + L2 LINE L2 2509 2775 -539 189 273 23 0 chr2 9612227 9612271 -243644312 + L2 LINE L2 3265 3309 -4 2217 99 3 0 chr2 9612355 9612639 -243643944 - AluSx SINE Alu -27 285 1 376 260 107 30 chr2 9613088 9613257 -243643326 - MIR SINE MIR 0 262 81 623 338 64 7 chr2 9613276 9613696 -243642887 + LTR16B LTR ERVL 21 464 0 499 265 103 27 chr2 9613718 9614135 -243642448 + MLT1J LTR MaLR 10 511 0 616 138 26 17 chr2 9614223 9614339 -243642244 + LTR45B LTR ERV1 12 128 -361 249 200 0 0 chr2 9614379 9614434 -243642149 + LTR45B LTR ERV1 129 183 -306 2246 103 3 7 chr2 9614498 9614798 -243641785 - AluSq SINE Alu -14 299 1 860 182 120 29 chr2 9614810 9615052 -243641531 + LTR45B LTR ERV1 226 489 0 316 274 234 51 chr2 9615909 9616263 -243640320 + L2 LINE L2 2853 3271 -1 344 282 86 58 chr2 9616719 9616893 -243639690 + MIR SINE MIR 34 212 -50 784 164 0 0 chr2 9617150 9617272 -243639311 + FLAM_C SINE Alu 1 122 -21 237 33 0 0 chr2 9617272 9617302 -243639281 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 590 11 34 11 chr2 9617329 9617417 -243639166 + (CA)n Simple_repeat Simple_repeat 1 90 0 386 287 108 46 chr2 9617582 9617727 -243638856 + L1ME4a LINE L1 5211 5346 -818 2258 112 0 7 chr2 9617727 9618023 -243638560 + AluSx SINE Alu 1 294 -18 386 287 108 46 chr2 9618023 9618135 -243638448 + L1ME4a LINE L1 5346 5485 -679 2017 123 10 30 chr2 9618152 9618452 -243638131 + AluJo SINE Alu 1 294 -18 258 248 111 46 chr2 9618455 9618608 -243637975 + L1ME4a LINE L1 5579 5741 -380 236 233 67 42 chr2 9618708 9618828 -243637755 + L1ME4a LINE L1 5974 6096 -25 221 316 90 32 chr2 9619324 9619479 -243637104 + MIR SINE MIR 20 183 -79 212 333 51 0 chr2 9620016 9620094 -243636489 + MIR SINE MIR 56 137 -125 250 290 56 11 chr2 9620477 9620585 -243635998 + MIR SINE MIR 32 144 -64 1745 131 0 51 chr2 9620589 9620864 -243635719 + AluJo SINE Alu 34 294 -18 286 229 114 43 chr2 9620969 9621109 -243635474 + MIR SINE MIR 63 212 -50 2202 124 0 7 chr2 9621384 9621691 -243634892 + AluSx SINE Alu 1 305 -7 1916 99 35 3 chr2 9621921 9622205 -243634378 - AluY SINE Alu -18 293 1 2121 124 3 7 chr2 9622558 9622857 -243633726 - AluSx SINE Alu -12 300 3 1149 88 71 28 chr2 9623508 9623690 -243632893 - AluSq SINE Alu -123 190 1 2559 90 0 0 chr2 9623742 9624053 -243632530 - AluSx SINE Alu -1 311 1 339 286 51 0 chr2 9624278 9624376 -243632207 + MIR SINE MIR 119 221 -41 2301 108 0 22 chr2 9624468 9624782 -243631801 + AluSx SINE Alu 1 307 -5 244 315 110 16 chr2 9624898 9625025 -243631558 + MIR3 SINE MIR 64 202 -6 811 137 73 12 chr2 9625470 9625640 -243630943 - MSTC LTR MaLR -229 167 2 1310 137 5 0 chr2 9625691 9625895 -243630688 + MER2 DNA MER2_type 2 206 -139 1671 171 9 29 chr2 9625901 9626216 -243630367 - AluSx SINE Alu -3 309 1 21 36 0 0 chr2 9626216 9626244 -243630339 + AT_rich Low_complexity Low_complexity 1 28 0 2284 82 7 7 chr2 9626244 9626536 -243630047 + AluSx SINE Alu 7 298 -14 2021 146 37 75 chr2 9626904 9627443 -243629140 - MER51A LTR ERV1 0 640 1 776 334 98 14 chr2 9627691 9628449 -243628134 + L1MEc LINE L1 1000 1820 -4576 325 339 58 36 chr2 9628567 9628791 -243627792 + L1MEc LINE L1 1940 2168 -4047 845 222 6 11 chr2 9628797 9628973 -243627610 + FAM SINE Alu 1 175 0 289 234 170 34 chr2 9628991 9629025 -243627558 - L1MC5 LINE L1 -36 7925 7897 1401 210 10 39 chr2 9629025 9629335 -243627248 + AluJo SINE Alu 1 301 -11 289 234 170 34 chr2 9629335 9629535 -243627048 - L1MC5 LINE L1 -64 7897 7659 422 299 77 58 chr2 9629535 9629594 -243626989 + L1MEc LINE L1 2181 2237 -3978 2140 140 10 0 chr2 9629594 9629902 -243626681 - AluSx SINE Alu -1 311 1 422 299 77 58 chr2 9629902 9630049 -243626534 + L1MEc LINE L1 2237 2391 -3824 1349 142 124 11 chr2 9630162 9630429 -243626154 - AluJo SINE Alu 0 312 16 1720 78 9 5 chr2 9630709 9630927 -243625656 + AluSp SINE Alu 1 219 -94 827 98 0 49 chr2 9630927 9631049 -243625534 + AluSp/q SINE Alu 188 303 -10 210 37 0 0 chr2 9631734 9631761 -243624822 + (CA)n Simple_repeat Simple_repeat 2 28 0 294 114 0 0 chr2 9632006 9632050 -243624533 + U5 snRNA snRNA 8 51 -65 278 169 264 0 chr2 9632214 9632328 -243624255 + MIR SINE MIR 104 261 -1 261 83 0 0 chr2 9632738 9632774 -243623809 + (T)n Simple_repeat Simple_repeat 1 36 0 2213 123 8 14 chr2 9633338 9633695 -243622888 - THE1A LTR MaLR 0 355 1 2205 88 7 11 chr2 9634071 9634397 -243622186 - AluSp SINE Alu 0 325 1 198 196 22 0 chr2 9634619 9634665 -243621918 + MIR SINE MIR 47 93 -169 488 78 0 117 chr2 9634685 9634726 -243621857 - MER53 DNA DNA -5 184 140 2155 123 3 0 chr2 9634726 9635028 -243621555 + AluSx SINE Alu 1 303 -9 488 78 0 117 chr2 9635028 9635089 -243621494 - MER53 DNA DNA -49 140 94 2270 122 0 3 chr2 9635217 9635528 -243621055 + AluSq SINE Alu 1 310 -3 364 211 26 0 chr2 9635615 9635683 -243620900 - MER58A DNA MER1_type -1 223 154 614 202 54 0 chr2 9635683 9635812 -243620771 - MER58A DNA MER1_type 0 136 1 380 329 43 69 chr2 9636486 9636669 -243619914 - L2 LINE L2 -29 3284 3109 2372 166 25 52 chr2 9636669 9637192 -243619391 + LTR54 LTR ERV1 2 510 0 380 329 43 69 chr2 9637192 9637285 -243619298 - L2 LINE L2 -204 3109 3015 227 304 108 0 chr2 9637354 9637456 -243619127 - LTR33A LTR ERVL 0 523 411 2378 119 0 0 chr2 9637460 9637772 -243618811 + AluSq SINE Alu 1 312 -1 386 293 13 19 chr2 9638036 9638193 -243618390 + L1ME LINE L1 5273 5428 -2380 1024 125 82 86 chr2 9638202 9638243 -243618340 - MLT2B3 LTR ERVL 0 554 514 1788 166 17 39 chr2 9638243 9638599 -243617984 + MER7A DNA MER2_type 1 346 0 1024 125 82 86 chr2 9638599 9638789 -243617794 - MLT2B3 LTR ERVL -40 514 324 193 313 0 73 chr2 9638967 9639063 -243617520 + MIR SINE MIR 172 260 -2 269 318 11 0 chr2 9639131 9639219 -243617364 + L2 LINE L2 3183 3271 -1 217 264 41 58 chr2 9639466 9639587 -243616996 + L2 LINE L2 1580 1698 -1616 439 270 8 0 chr2 9639601 9639727 -243616856 + L2 LINE L2 2246 2372 -942 357 336 8 0 chr2 9639950 9640075 -243616508 + L1ME LINE L1 5596 5721 -449 831 271 44 4 chr2 9640246 9640497 -243616086 + MIR SINE MIR 2 262 0 324 244 61 0 chr2 9640584 9640666 -243615917 + MIR SINE MIR 96 182 -80 467 225 17 33 chr2 9640813 9640933 -243615650 - MIR3 SINE MIR -8 200 83 560 109 11 11 chr2 9641156 9641248 -243615335 + L1MA10 LINE L1 6234 6325 -9 1124 40 20 0 chr2 9641268 9641456 -243615127 + L1PA2 LINE L1 6002 6155 0 184 329 264 0 chr2 9641519 9641659 -243614924 - MIR SINE MIR -10 252 76 2016 116 36 7 chr2 9641743 9642046 -243614537 + AluJb SINE Alu 1 312 0 270 307 73 13 chr2 9642325 9642475 -243614108 - MIR3 SINE MIR -7 201 43 572 238 54 18 chr2 9642535 9642703 -243613880 + MER5B DNA MER1_type 5 178 0 2522 83 0 0 chr2 9642812 9643114 -243613469 - AluSx SINE Alu -10 302 1 321 329 37 30 chr2 9643403 9643567 -243613016 - MIR SINE MIR -78 184 20 271 270 167 24 chr2 9644351 9644477 -243612106 + MIR3 SINE MIR 18 161 -47 253 358 58 0 chr2 9644475 9644595 -243611988 + MIR3 SINE MIR 69 195 -13 * 1206 58 0 0 chr2 9645928 9646083 -243610500 + (TTCCC)n Simple_repeat Simple_repeat 3 157 0 2393 95 0 0 chr2 9646513 9646807 -243609776 + AluSx SINE Alu 1 294 -18 1839 164 0 14 chr2 9646858 9647144 -243609439 - AluJo SINE Alu -30 282 1 255 62 0 0 chr2 9647256 9647288 -243609295 - U2 snRNA snRNA -156 32 1 937 147 35 56 chr2 9647799 9647997 -243608586 - Tigger1 DNA MER2_type 0 2418 2225 1354 124 6 0 chr2 9648000 9648178 -243608405 + AluSx SINE Alu 1 179 -133 10851 128 32 35 chr2 9648181 9648362 -243608221 - Tigger1 DNA MER2_type -511 1907 1727 1533 187 29 0 chr2 9648362 9648672 -243607911 - L1PA16 LINE L1 0 6166 5848 10851 128 32 35 chr2 9648672 9649552 -243607031 - Tigger1 DNA MER2_type -691 1727 854 1726 115 186 14 chr2 9649552 9649917 -243606666 + MSTA LTR MaLR 1 428 0 10851 128 32 35 chr2 9649917 9650746 -243605837 - Tigger1 DNA MER2_type -1564 854 23 2491 58 19 22 chr2 9651266 9651579 -243605004 + AluSx SINE Alu 1 312 0 277 308 19 19 chr2 9651611 9651715 -243604868 - MIR3 SINE MIR -52 156 53 245 231 62 0 chr2 9652369 9652434 -243604149 + MER81 DNA DNA 46 114 0 876 228 113 48 chr2 9652458 9652769 -243603814 + MER58B DNA MER1_type 10 340 -1 1012 183 27 76 chr2 9653672 9653935 -243602648 - MLT1D LTR MaLR 0 505 256 211 316 0 0 chr2 9654842 9654921 -243601662 + (TG)n Simple_repeat Simple_repeat 1 79 0 251 366 0 0 chr2 9654988 9655100 -243601483 + (TG)n Simple_repeat Simple_repeat 1 112 0 478 335 12 0 chr2 9655488 9655661 -243600922 + (CAGAGA)n Simple_repeat Simple_repeat 5 179 0 241 333 62 14 chr2 9655723 9655867 -243600716 + MIR3 SINE MIR 35 185 -23 401 209 11 11 chr2 9656508 9656599 -243599984 - AluJ/FLAM SINE Alu -210 92 2 2691 49 0 0 chr2 9657067 9657372 -243599211 - AluY SINE Alu -6 305 1 560 271 98 5 chr2 9657463 9657677 -243598906 + L1MEd LINE L1 594 827 -5292 1863 164 6 31 chr2 9657693 9658011 -243598572 - AluJb SINE Alu -2 310 1 26 30 0 0 chr2 9658022 9658055 -243598528 + AT_rich Low_complexity Low_complexity 1 33 0 544 270 103 68 chr2 9658070 9658922 -243597661 + L1MEd LINE L1 852 1673 -4637 1974 143 28 0 chr2 9658922 9659209 -243597374 + AluJb SINE Alu 1 295 -17 544 270 103 68 chr2 9659209 9659386 -243597197 + L1MEd LINE L1 1673 1842 -4468 2087 144 0 0 chr2 9659386 9659684 -243596899 - AluSx SINE Alu -14 298 1 544 270 103 68 chr2 9659684 9660080 -243596503 + L1MEd LINE L1 1842 2345 -3965 24 0 0 0 chr2 9660164 9660188 -243596395 + AT_rich Low_complexity Low_complexity 1 24 0 333 316 67 84 chr2 9660541 9660898 -243595685 - L2 LINE L2 -20 3252 2902 684 187 169 21 chr2 9661606 9661973 -243594610 + LTR48 LTR ERV1 362 706 -1 1347 175 34 7 chr2 9661974 9662243 -243594340 - L1MB4 LINE L1 -317 5863 5588 475 157 122 68 chr2 9662412 9662559 -243594024 + MLT1B LTR MaLR 1 155 -235 360 194 15 0 chr2 9662562 9662629 -243593954 + MLT1B LTR MaLR 303 370 -4 1059 96 6 11 chr2 9663418 9663596 -243592987 + (TCCA)n Simple_repeat Simple_repeat 4 180 0 264 189 144 33 chr2 9663912 9664002 -243592581 - MIR SINE MIR -69 139 40 1871 128 0 7 chr2 9665218 9665492 -243591091 - AluSx SINE Alu -2 310 39 280 283 71 20 chr2 9665692 9665791 -243590792 - MIR SINE MIR -117 145 42 1949 174 52 17 chr2 9666154 9666561 -243590022 + MLT1C LTR MaLR 3 423 -44 205 286 187 0 chr2 9666609 9666700 -243589883 + MIR SINE MIR 89 196 -66 277 195 52 13 chr2 9668081 9668158 -243588425 + MIR SINE MIR 69 148 -60 190 308 125 39 chr2 9668230 9668438 -243588145 + L2 LINE L2 3030 3255 -17 243 0 0 0 chr2 9668438 9668465 -243588118 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 231 286 36 0 chr2 9669166 9669250 -243587333 - MIR SINE MIR -78 130 44 428 303 37 21 chr2 9669721 9669909 -243586674 + MIR SINE MIR 2 192 -70 269 313 55 49 chr2 9670223 9670386 -243586197 - MIR SINE MIR -71 191 28 225 230 115 44 chr2 9672661 9672774 -243583809 + MER5A DNA MER1_type 67 187 -2 * 527 158 42 0 chr2 9672687 9672782 -243583801 - MER5A DNA MER1_type -82 107 9 428 272 29 58 chr2 9672786 9672959 -243583624 + MIR SINE MIR 20 187 -75 2158 146 39 62 chr2 9672969 9673048 -243583535 - Tigger2 DNA MER2_type 0 2718 2639 1798 157 0 7 chr2 9673048 9673341 -243583242 + AluJo SINE Alu 6 296 -16 2158 146 39 62 chr2 9673341 9673694 -243582889 - Tigger2 DNA MER2_type -79 2639 2296 274 140 263 0 chr2 9673716 9673773 -243582810 - Tigger2 DNA MER2_type -2646 72 1 242 289 72 26 chr2 9673839 9673991 -243582592 - L2 LINE L2 -529 2785 2627 193 269 29 58 chr2 9674249 9674353 -243582230 + L2 LINE L2 2996 3096 -176 302 359 0 0 chr2 9674353 9674470 -243582113 + (TG)n Simple_repeat Simple_repeat 1 117 0 531 353 14 14 chr2 9676384 9676605 -243579978 - L3 LINE CR1 -819 758 538 666 287 48 5 chr2 9677186 9677374 -243579209 - MER91A DNA MER1_type 0 196 1 255 385 42 6 chr2 9679252 9679418 -243577165 + L2 LINE L2 2564 2735 -579 312 285 0 36 chr2 9679418 9679555 -243577028 + CT-rich Low_complexity Low_complexity 3 134 0 213 270 40 50 chr2 9679556 9679656 -243576927 - L2 LINE L2 -19 3253 3155 541 131 39 1 chr2 9679792 9679942 -243576641 + L1MC1 LINE L1 6148 6341 -3 294 306 92 43 chr2 9679982 9680286 -243576297 + L2 LINE L2 2832 3150 -122 2535 150 55 5 chr2 9681449 9681888 -243574695 + MER65C LTR ERV1 1 461 0 207 358 32 0 chr2 9683211 9683306 -243573277 + L3 LINE CR1 1434 1531 -46 2588 147 22 15 chr2 9684056 9684473 -243572110 - MLT1C LTR MaLR -2 465 43 2302 169 8 13 chr2 9684473 9684863 -243571720 - MLT1B LTR MaLR 0 390 3 2588 147 22 15 chr2 9684863 9684907 -243571676 - MLT1C LTR MaLR -424 43 1 408 336 99 25 chr2 9684923 9685277 -243571306 - L2 LINE L2 -1 3271 2892 309 209 187 0 chr2 9685576 9685594 -243570989 - L1MA10 LINE L1 -3 6331 6314 400 257 184 0 chr2 9685594 9685812 -243570771 - L1ME2 LINE L1 -13 6151 5894 514 236 73 37 chr2 9685839 9686046 -243570537 - L1ME2 LINE L1 -569 5597 5384 243 0 0 0 chr2 9686956 9686983 -243569600 + (TG)n Simple_repeat Simple_repeat 2 28 0 328 290 186 41 chr2 9687705 9687990 -243568593 - L2 LINE L2 -270 3043 2801 2265 102 0 10 chr2 9687990 9688303 -243568280 + AluSg SINE Alu 1 310 0 328 290 186 41 chr2 9688303 9688470 -243568113 - L2 LINE L2 -512 2801 2519 884 236 15 0 chr2 9688488 9688683 -243567900 - MER20 DNA MER1_type -21 198 1 237 339 73 0 chr2 9688685 9688809 -243567774 - L2 LINE L2 -789 2525 2393 249 283 0 0 chr2 9689671 9689731 -243566852 - L2 LINE L2 -214 3058 2999 222 200 0 0 chr2 9689939 9689989 -243566594 - L2 LINE L2 0 3313 3264 * 916 231 39 21 chr2 9689958 9690192 -243566391 - MIR SINE MIR -13 249 12 211 369 99 19 chr2 9690670 9691085 -243565498 + L2 LINE L2 2456 2903 -411 296 309 91 30 chr2 9691356 9691521 -243565062 + MIR SINE MIR 55 229 -33 249 111 205 94 chr2 9691904 9691987 -243564596 - Charlie4 DNA MER1_type -7 1954 1853 1507 205 93 37 chr2 9691987 9692362 -243564221 - MSTD LTR MaLR 0 396 1 249 111 205 94 chr2 9692362 9692395 -243564188 - Charlie4 DNA MER1_type -108 1853 1825 747 203 38 0 chr2 9692397 9692530 -243564053 + FRAM SINE Alu 9 146 -30 234 0 0 0 chr2 9692532 9692558 -243564025 + (CATA)n Simple_repeat Simple_repeat 3 28 0 826 199 33 50 chr2 9692930 9693030 -243563553 + MER45A DNA AcHobo 1 98 -1483 1803 157 7 13 chr2 9693030 9693329 -243563254 - AluJb SINE Alu -15 297 1 826 199 33 50 chr2 9693329 9693409 -243563174 + MER45A DNA AcHobo 98 178 0 1175 240 118 48 chr2 9693919 9694377 -243562206 + MLT1F1 LTR MaLR 70 559 -8 675 179 0 7 chr2 9694746 9694922 -243561661 + AluJo SINE Alu 14 221 -91 367 322 122 6 chr2 9694926 9695106 -243561477 - MIR SINE MIR -27 235 35 701 304 45 20 chr2 9696257 9696504 -243560079 - MIR SINE MIR -1 261 9 1559 248 62 12 chr2 9696579 9697011 -243559572 - MLT1C LTR MaLR -8 459 6 2048 134 0 0 chr2 9697132 9697423 -243559160 + AluSp SINE Alu 1 291 -22 584 167 28 0 chr2 9697638 9697746 -243558837 + L1MB5 LINE L1 5815 5925 -249 224 272 0 65 chr2 9698394 9698563 -243558020 + C-rich Low_complexity Low_complexity 2 159 0 674 235 65 71 chr2 9698850 9699105 -243557478 - MIR SINE MIR 0 262 12 1446 282 54 9 chr2 9699119 9699580 -243557003 - MLT1L LTR MaLR -76 539 58 401 280 49 42 chr2 9699647 9699790 -243556793 - MIR SINE MIR -81 181 38 180 77 0 0 chr2 9700172 9700198 -243556385 + (T)n Simple_repeat Simple_repeat 1 26 0 519 31 0 0 chr2 9700217 9700282 -243556301 - AluY SINE Alu -244 66 2 1149 123 0 0 chr2 9700761 9700914 -243555669 + (CCCA)n Simple_repeat Simple_repeat 1 332 0 1149 123 0 0 chr2 9700914 9701093 -243555490 + (CCCA)n Simple_repeat Simple_repeat 2 180 0 848 201 0 0 chr2 9701368 9701512 -243555071 - U4 snRNA snRNA -1 144 1 261 282 76 53 chr2 9702046 9702083 -243554500 + MIR SINE MIR 33 68 -194 2590 155 19 19 chr2 9702083 9702515 -243554068 + MSTB1 LTR MaLR 1 432 0 261 282 76 53 chr2 9702515 9702608 -243553975 + MIR SINE MIR 68 166 -96 2114 86 0 4 chr2 9703076 9703355 -243553228 + AluSq SINE Alu 25 302 -11 1732 133 21 7 chr2 9703748 9704033 -243552550 - AluSx SINE Alu -23 289 1 723 69 29 10 chr2 9704899 9705001 -243551582 - AluY SINE Alu 0 311 208 2197 92 3 13 chr2 9705695 9706000 -243550583 - AluSq SINE Alu -11 302 1 2330 171 22 10 chr2 9706000 9706349 -243550234 + MSTB LTR MaLR 6 362 -64 1705 114 15 11 chr2 9706349 9706611 -243549972 - AluSg SINE Alu -10 300 38 2330 171 22 10 chr2 9706611 9706677 -243549906 + MSTB LTR MaLR 362 426 0 2080 118 0 3 chr2 9708111 9708408 -243548175 - AluSx SINE Alu -3 309 14 253 169 0 51 chr2 9708849 9708908 -243547675 + L1MB2 LINE L1 6095 6150 -21 314 309 71 0 chr2 9708910 9708994 -243547589 + L1MC4 LINE L1 6614 6703 -1339 1756 123 42 11 chr2 9709121 9709405 -243547178 + AluSx SINE Alu 1 293 -19 2078 125 3 0 chr2 9710152 9710449 -243546134 + AluSx SINE Alu 3 300 -12 1061 127 58 0 chr2 9711278 9711467 -243545116 + AluSg/x SINE Alu 95 294 -18 1878 124 95 12 chr2 9711649 9711987 -243544596 + THE1C LTR MaLR 10 375 0 382 252 63 0 chr2 9711987 9712114 -243544469 - MIR SINE MIR -103 159 25 1181 129 46 28 chr2 9712957 9713174 -243543409 - L1PA15 LINE L1 -13 6152 5932 188 298 40 89 chr2 9713179 9713303 -243543280 + L2 LINE L2 3134 3251 -21 815 241 227 16 chr2 9713596 9713966 -243542617 - MLT1H1 LTR MaLR -62 493 46 315 238 49 112 chr2 9713972 9714115 -243542468 - MIR SINE MIR -108 154 21 1692 139 0 22 chr2 9714116 9714390 -243542193 + AluJo SINE Alu 1 268 -44 421 298 60 12 chr2 9714510 9714678 -243541905 - MER5B DNA MER1_type -2 176 1 469 202 48 90 chr2 9715015 9715203 -243541380 + L1M4 LINE L1 4408 4587 -1559 263 290 232 14 chr2 9715398 9715536 -243541047 + MER115 DNA AcHobo 218 385 -308 1041 240 43 0 chr2 9715577 9715810 -243540773 + MER115 DNA AcHobo 451 693 0 247 311 58 0 chr2 9715848 9715951 -243540632 + L2 LINE L2 2935 3043 -229 483 206 10 0 chr2 9716244 9716341 -243540242 - MER5A DNA MER1_type -80 109 12 225 320 13 0 chr2 9716603 9716681 -243539902 + MIR SINE MIR 44 122 -86 478 313 0 0 chr2 9716794 9716925 -243539658 - MIR SINE MIR -21 241 111 3359 149 15 11 chr2 9717013 9717542 -243539041 - LTR26B LTR ERV1 0 531 1 230 320 107 27 chr2 9717824 9717974 -243538609 + L2 LINE L2 3082 3243 -29 255 180 66 0 chr2 9718220 9718281 -243538302 + CT-rich Low_complexity Low_complexity 2 66 0 332 265 12 0 chr2 9718308 9718391 -243538192 + MIR SINE MIR 82 165 -97 512 30 15 0 chr2 9718677 9718743 -243537840 + (TGAA)n Simple_repeat Simple_repeat 4 70 0 2148 92 7 29 chr2 9720373 9720679 -243535904 + AluSx SINE Alu 1 299 -13 1143 138 0 11 chr2 9721979 9722160 -243534423 - AluSp SINE Alu -1 312 134 2112 100 38 0 chr2 9722161 9722451 -243534132 - AluSq SINE Alu -10 303 3 1210 170 59 95 chr2 9722465 9722485 -243534098 + MLT1B LTR MaLR 1 20 -370 2190 178 3 11 chr2 9722485 9722851 -243533732 + MLT1A1 LTR MaLR 1 363 -2 1210 170 59 95 chr2 9722851 9723159 -243533424 + MLT1B LTR MaLR 20 313 -77 1058 172 91 5 chr2 9723185 9723406 -243533177 + MLT2C2 LTR ERVL 215 454 -10 212 0 0 35 chr2 9724090 9724119 -243532464 + (CCTG)n Simple_repeat Simple_repeat 2 29 0 195 279 162 0 chr2 9724162 9724230 -243532353 + L2 LINE L2 2716 2794 -520 185 193 0 18 chr2 9727983 9728040 -243528543 + (CA)n Simple_repeat Simple_repeat 2 57 0 2073 84 39 0 chr2 9728699 9728983 -243527600 + AluSc SINE Alu 1 295 -14 213 39 0 0 chr2 9729129 9729155 -243527428 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1928 121 3 0 chr2 9729158 9729440 -243527143 - AluSx SINE Alu -29 283 1 887 265 90 15 chr2 9729761 9730173 -243526410 + MLT1C LTR MaLR 7 449 -18 2214 106 0 0 chr2 9730962 9731330 -243525253 + AluSq SINE Alu 1 368 0 231 114 0 0 chr2 9734514 9734549 -243522034 + (GAAA)n Simple_repeat Simple_repeat 2 36 0 411 21 0 0 chr2 9734686 9734734 -243521849 + (TG)n Simple_repeat Simple_repeat 1 48 0 186 71 0 0 chr2 9734736 9734764 -243521819 + (GA)n Simple_repeat Simple_repeat 2 29 0 1658 98 0 45 chr2 9734777 9735022 -243521561 - AluSq SINE Alu -79 234 1 1586 188 24 3 chr2 9735215 9735507 -243521076 - AluJb SINE Alu -14 298 1 2059 95 0 7 chr2 9735590 9735874 -243520709 + AluSq SINE Alu 1 282 -31 1406 225 186 19 chr2 9735874 9736346 -243520237 + L1ME3A LINE L1 5592 6142 -28 406 256 47 16 chr2 9736439 9736568 -243520015 + MLT1J2 LTR MaLR 253 385 -65 198 103 0 0 chr2 9736603 9736632 -243519951 + (GGGA)n Simple_repeat Simple_repeat 4 32 0 1041 224 103 38 chr2 9736765 9737162 -243519421 + L1MC4a LINE L1 5804 6226 -1582 313 123 92 15 chr2 9737194 9737259 -243519324 - MLT1C LTR MaLR -217 250 181 818 93 0 60 chr2 9737296 9737316 -243519267 - AluJo/FRAM SINE Alu 0 312 292 2792 16 0 0 chr2 9737316 9737634 -243518949 - AluYb8 SINE Alu 0 318 1 818 93 0 60 chr2 9737634 9737763 -243518820 - AluJo/FRAM SINE Alu -20 292 172 210 262 36 83 chr2 9738306 9738390 -243518193 - MIR SINE MIR -60 148 69 204 139 0 47 chr2 9738529 9738572 -243518011 + (CGGGGG)n Simple_repeat Simple_repeat 2 42 0 304 357 108 9 chr2 9738575 9738788 -243517795 + MIR SINE MIR 16 249 -13 253 208 57 0 chr2 9738994 9739047 -243517536 - MER2 DNA MER2_type -24 321 266 34 34 0 17 chr2 9739047 9739077 -243517506 + AT_rich Low_complexity Low_complexity 1 31 -27 2277 86 0 3 chr2 9739077 9739380 -243517203 - AluSq SINE Alu -5 308 7 34 34 0 17 chr2 9739380 9739408 -243517175 + AT_rich Low_complexity Low_complexity 31 58 0 1511 176 10 19 chr2 9739408 9739715 -243516868 + AluSx SINE Alu 1 304 -8 1372 137 5 0 chr2 9739729 9739933 -243516650 - MER2 DNA MER2_type -139 206 2 850 136 73 12 chr2 9739984 9740154 -243516429 + MSTC LTR MaLR 2 167 -229 262 315 110 16 chr2 9740599 9740726 -243515857 - MIR3 SINE MIR -6 202 64 2138 108 0 22 chr2 9740842 9741156 -243515427 - AluSx SINE Alu -5 307 1 374 280 50 0 chr2 9741248 9741348 -243515235 - MIR SINE MIR -41 221 117 2393 88 0 0 chr2 9741571 9741879 -243514704 + AluSx SINE Alu 1 308 -4 1913 102 47 0 chr2 9741934 9742209 -243514374 + AluSq SINE Alu 1 288 -25 303 28 0 0 chr2 9742212 9742248 -243514335 + (TAAAA)n Simple_repeat Simple_repeat 5 40 0 301 253 42 21 chr2 9742678 9742773 -243513810 + MIR SINE MIR 52 148 -60 21 0 0 0 chr2 9743566 9743587 -243512996 + AT_rich Low_complexity Low_complexity 1 21 0 425 288 101 42 chr2 9743828 9743979 -243512604 - L1ME4a LINE L1 -4 6117 5976 2266 110 0 0 chr2 9743979 9744289 -243512294 - AluSg SINE Alu 0 310 1 425 288 101 42 chr2 9744289 9744425 -243512158 - L1ME4a LINE L1 -145 5976 5813 285 75 0 0 chr2 9744841 9744881 -243511702 + (TC)n Simple_repeat Simple_repeat 2 41 0 204 40 0 0 chr2 9744881 9744906 -243511677 + (CA)n Simple_repeat Simple_repeat 1 25 0 2998 205 55 40 chr2 9744918 9745145 -243511438 + L1ME1 LINE L1 4415 4637 -1529 738 179 7 57 chr2 9745145 9745285 -243511298 + FLAM_C SINE Alu 1 133 0 2998 205 55 40 chr2 9745285 9745915 -243510668 + L1ME1 LINE L1 4637 5299 -867 2127 114 10 0 chr2 9745915 9746214 -243510369 + AluSx SINE Alu 1 302 -10 2998 205 55 40 chr2 9746214 9746502 -243510081 + L1ME1 LINE L1 5299 5581 -585 1719 127 6 74 chr2 9746509 9746832 -243509751 + AluJo SINE Alu 6 306 -6 512 183 16 0 chr2 9746851 9746977 -243509606 + GA-rich Low_complexity Low_complexity 3 130 0 1480 229 89 4 chr2 9746977 9747479 -243509104 + L1ME1 LINE L1 5567 6155 -11 204 174 130 0 chr2 9747674 9747720 -243508863 - L2 LINE L2 -1072 2242 2191 558 266 128 63 chr2 9747767 9748289 -243508294 - HAL1 LINE L1 -229 2278 1723 2097 97 4 0 chr2 9748289 9748605 -243507978 - AluSg SINE Alu 0 317 1 270 252 109 25 chr2 9748938 9749057 -243507526 + MIR SINE MIR 16 144 -64 437 283 58 52 chr2 9749668 9749859 -243506724 - MIR SINE MIR -50 212 21 2103 261 220 10 chr2 9750114 9751135 -243505448 + L2 LINE L2 1560 2795 -519 23 33 0 0 chr2 9751204 9751234 -243505349 + AT_rich Low_complexity Low_complexity 1 30 0 2194 112 0 0 chr2 9751286 9751590 -243504993 + AluSx SINE Alu 1 304 -8 6950 118 23 23 chr2 9751684 9752744 -243503839 + L1MA2 LINE L1 4342 5411 -893 1995 99 3 11 chr2 9752744 9753048 -243503535 + AluSc SINE Alu 1 302 0 6950 118 23 23 chr2 9753048 9753942 -243502641 + L1MA2 LINE L1 5411 6304 0 283 278 211 23 chr2 9754427 9754560 -243502023 + MIR SINE MIR 105 262 0 2259 101 3 0 chr2 9755189 9755496 -243501087 - AluSx SINE Alu -4 308 1 1818 249 94 50 chr2 9755730 9756021 -243500562 + Charlie7 DNA MER1_type 984 1261 -1351 2501 50 0 0 chr2 9756021 9756323 -243500260 + AluY SINE Alu 1 302 -9 1818 249 94 50 chr2 9756323 9756789 -243499794 + Charlie7 DNA MER1_type 1261 1774 -838 781 221 181 18 chr2 9756810 9757136 -243499447 + L2 LINE L2 1202 1580 -1734 871 120 8 23 chr2 9757140 9757273 -243499310 - THE1B LTR MaLR 0 364 234 318 227 6 3 chr2 9757272 9757337 -243499246 - AluJ/monomer SINE Alu -249 53 1 * 1376 276 56 26 chr2 9757338 9757550 -243499033 - L1P LINE L1 -743 5403 5199 1592 173 20 7 chr2 9757550 9757850 -243498733 - AluJo SINE Alu -8 304 1 1376 276 56 26 chr2 9757850 9758135 -243498448 - L1P LINE L1 -947 5199 4888 1779 149 3 23 chr2 9758135 9758437 -243498146 + AluSx SINE Alu 15 310 -2 1376 276 56 26 chr2 9758437 9758579 -243498004 - L1P LINE L1 -1258 4888 4752 1330 185 49 28 chr2 9758623 9758909 -243497674 - AluJb SINE Alu 0 312 21 792 229 6 113 chr2 9758912 9759193 -243497390 - L1M4 LINE L1 -2310 3836 3593 1764 149 3 14 chr2 9759193 9759488 -243497095 - AluSx SINE Alu -3 309 18 792 229 6 113 chr2 9759488 9759533 -243497050 - L1M4 LINE L1 -2553 3593 3545 1888 121 36 0 chr2 9759534 9759815 -243496768 + AluSg SINE Alu 1 291 -19 325 268 0 0 chr2 9759822 9759904 -243496679 - L1M4 LINE L1 -2761 3385 3304 692 203 62 0 chr2 9759954 9760082 -243496501 - FRAM SINE Alu -41 135 1 232 241 36 0 chr2 9760083 9760166 -243496417 - L1M4 LINE L1 -2884 3262 3177 1905 105 0 0 chr2 9760185 9760442 -243496141 + AluSx SINE Alu 1 257 -55 578 205 0 8 chr2 9760442 9760553 -243496030 - AluSq/x SINE Alu -195 118 9 744 301 60 25 chr2 9760681 9760963 -243495620 + L2 LINE L2 3021 3312 -1 664 117 63 0 chr2 9761044 9761155 -243495428 - FLAM_C SINE Alu -23 120 3 211 277 161 9 chr2 9761177 9761289 -243495294 - MIR3 SINE MIR -69 139 11 1705 150 3 26 chr2 9762334 9762641 -243493942 - AluJo SINE Alu -12 300 1 337 242 33 44 chr2 9762892 9762983 -243493600 + L2 LINE L2 3183 3272 0 2101 108 3 3 chr2 9763884 9764181 -243492402 + AluSx SINE Alu 1 297 -15 200 267 208 10 chr2 9764314 9764415 -243492168 - MIR3 SINE MIR -85 123 3 478 178 0 11 chr2 9764697 9764787 -243491796 + L1MEc LINE L1 35 123 -6273 633 289 73 34 chr2 9764794 9765175 -243491408 - Charlie1a DNA MER1_type -964 491 96 289 214 155 0 chr2 9765940 9766024 -243490559 - L1ME4a LINE L1 -3 6118 6022 2196 100 3 0 chr2 9766568 9766867 -243489716 + AluSp SINE Alu 1 300 -13 226 238 88 25 chr2 9767307 9767387 -243489196 - L2 LINE L2 -2 3311 3227 21 0 0 0 chr2 9768190 9768211 -243488372 + AT_rich Low_complexity Low_complexity 1 21 0 261 0 0 0 chr2 9768211 9768240 -243488343 + (TG)n Simple_repeat Simple_repeat 2 30 0 194 271 21 0 chr2 9768488 9768536 -243488047 + MIR SINE MIR 101 149 -113 199 347 14 0 chr2 9768999 9769071 -243487512 + MIR SINE MIR 161 233 -29 913 207 35 0 chr2 9770265 9770439 -243486144 - MER5A DNA MER1_type 0 189 10 1811 159 0 0 chr2 9770680 9770975 -243485608 - AluSx SINE Alu -17 295 1 306 301 147 44 chr2 9771455 9771591 -243484992 + MIR SINE MIR 25 174 -88 1731 165 26 3 chr2 9771641 9771944 -243484639 - AluJb SINE Alu -2 310 1 293 333 93 13 chr2 9771978 9772128 -243484455 + MIR3 SINE MIR 30 191 -17 380 115 0 0 chr2 9772227 9772279 -243484304 + MER5A DNA MER1_type 138 189 0 29 28 0 0 chr2 9772903 9772939 -243483644 + AT_rich Low_complexity Low_complexity 1 36 0 186 268 0 0 chr2 9772976 9773017 -243483566 + L2 LINE L2 3007 3047 -225 2238 99 0 6 chr2 9773164 9773478 -243483105 - AluSq SINE Alu -1 312 1 2006 127 19 61 chr2 9773504 9773592 -243482991 - MER47A DNA MER2_type -1957 366 276 1849 149 7 21 chr2 9773592 9773880 -243482703 + AluJo SINE Alu 13 296 -16 2006 127 19 61 chr2 9773880 9774153 -243482430 - MER47A DNA MER2_type -2047 276 20 272 267 110 27 chr2 9775220 9775366 -243481217 - L2 LINE L2 -188 3125 2968 254 211 239 55 chr2 9775363 9775472 -243481111 + MER5A DNA MER1_type 61 189 0 * 1701 189 116 193 chr2 9775472 9775744 -243480839 - L2 LINE L2 -702 2612 2320 1651 150 44 78 chr2 9775744 9776130 -243480453 - THE1C LTR MaLR -2 373 1 9746 115 19 46 chr2 9776130 9777570 -243479013 - THE1C-int LTR MaLR 0 1580 189 1928 161 7 3 chr2 9777570 9777869 -243478714 - AluSx SINE Alu -12 300 1 9746 115 19 46 chr2 9777869 9778051 -243478532 - THE1C-int LTR MaLR -1391 189 3 1908 126 60 30 chr2 9778053 9778417 -243478166 - THE1C LTR MaLR 0 375 1 1701 189 116 193 chr2 9778417 9778525 -243478058 - L2 LINE L2 -994 2320 2205 659 193 0 7 chr2 9778525 9778665 -243477918 - MER104 DNA Tc2 -7 173 35 1701 189 116 193 chr2 9778665 9779142 -243477441 - L2 LINE L2 -1109 2205 1688 41965 40 3 1 chr2 9779146 9785277 -243471306 + L1PA4 LINE L1 2 6149 -6 792 241 67 22 chr2 9785277 9785547 -243471036 - L2 LINE L2 -1612 1702 1421 210 333 12 12 chr2 9786637 9786721 -243469862 - MIR3 SINE MIR -16 192 109 2218 110 0 0 chr2 9787381 9787705 -243468878 - AluSg SINE Alu 0 324 1 2114 120 14 0 chr2 9787776 9788067 -243468516 + AluSx SINE Alu 1 295 -17 35 88 0 0 chr2 9788217 9788308 -243468275 + AT_rich Low_complexity Low_complexity 1 91 0 1630 170 14 14 chr2 9788395 9788683 -243467900 + AluJb SINE Alu 9 296 -16 1029 231 128 79 chr2 9788713 9789257 -243467326 - HAL1 LINE L1 -110 2397 1814 2316 94 0 10 chr2 9789257 9789564 -243467019 - AluY SINE Alu -7 304 1 1029 231 128 79 chr2 9789564 9789678 -243466905 - HAL1 LINE L1 -693 1814 1707 2136 255 83 45 chr2 9789722 9790228 -243466355 - HAL1 LINE L1 -1604 903 349 2219 113 3 0 chr2 9790228 9790528 -243466055 + AluY SINE Alu 1 301 -10 2136 255 83 45 chr2 9790528 9790891 -243465692 - HAL1 LINE L1 -2158 349 1 410 184 8 5 chr2 9790987 9791119 -243465464 - MER5A DNA MER1_type 0 189 1 337 296 81 6 chr2 9791147 9791319 -243465264 - L1ME LINE L1 -317 5804 5620 505 228 101 7 chr2 9791337 9791486 -243465097 - L2 LINE L2 -32 3281 3119 1998 274 72 32 chr2 9791550 9792263 -243464320 + L2 LINE L2 2120 2860 -454 461 86 0 14 chr2 9792277 9792347 -243464236 - THE1B LTR MaLR -53 311 243 844 231 156 60 chr2 9792383 9792626 -243463957 + L2 LINE L2 2871 3089 -224 758 173 16 0 chr2 9792626 9792753 -243463830 - FLAM_A SINE Alu -4 129 1 844 231 156 60 chr2 9792753 9792912 -243463671 + L2 LINE L2 3089 3312 -1 2142 112 20 20 chr2 9793141 9793446 -243463137 - AluSx SINE Alu -7 305 1 2544 113 6 6 chr2 9793590 9793954 -243462629 - THE1B LTR MaLR 0 364 1 183 286 162 32 chr2 9794356 9794510 -243462073 + MIR SINE MIR 89 262 0 1004 232 46 13 chr2 9794859 9795096 -243461487 + MIR SINE MIR 18 262 0 1083 299 84 32 chr2 9795312 9795838 -243460745 + L2 LINE L2 2174 2726 -588 218 189 0 19 chr2 9796003 9796056 -243460527 + CT-rich Low_complexity Low_complexity 1 52 0 777 224 13 13 chr2 9796241 9796397 -243460186 + MER5A DNA MER1_type 6 161 -28 652 166 14 90 chr2 9796425 9796570 -243460013 - AluJo SINE Alu -178 134 1 206 205 0 0 chr2 9796570 9796609 -243459974 + MER5A DNA MER1_type 151 189 0 864 300 84 33 chr2 9796829 9796982 -243459601 - L2 LINE L2 -2 3311 3167 366 83 250 0 chr2 9796982 9797042 -243459541 - MADE1 DNA Mariner -3 77 3 864 300 84 33 chr2 9797042 9797219 -243459364 - L2 LINE L2 -146 3167 3000 2547 200 33 13 chr2 9797219 9797758 -243458825 - MER44D DNA MER2_type 0 605 1 864 300 84 33 chr2 9797758 9797942 -243458641 - L2 LINE L2 -313 3000 2776 541 182 53 28 chr2 9797943 9798093 -243458490 - L1ME2 LINE L1 0 6165 6020 708 221 121 26 chr2 9798111 9798345 -243458238 - L2 LINE L2 -550 2764 2505 181 306 94 24 chr2 9798345 9798430 -243458153 - MER5C DNA MER1_type 0 324 234 225 0 0 0 chr2 9798609 9798634 -243457949 + (T)n Simple_repeat Simple_repeat 1 25 0 2076 125 7 14 chr2 9799234 9799530 -243457053 + AluSx SINE Alu 1 294 -18 692 258 44 18 chr2 9799701 9799926 -243456657 + L2 LINE L2 3083 3313 0 183 322 128 35 chr2 9800004 9800231 -243456352 - L2 LINE L2 -47 3225 2978 2119 79 23 0 chr2 9800292 9800558 -243456025 - AluSg SINE Alu -16 294 23 325 286 0 0 chr2 9800559 9800636 -243455947 - FLAM_A SINE Alu -50 83 7 21 0 0 0 chr2 9801131 9801152 -243455431 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr2 9801285 9801306 -243455277 + AT_rich Low_complexity Low_complexity 1 21 0 4459 172 29 14 chr2 9802064 9802951 -243453632 - MER52A LTR ERV1 0 1755 881 347 171 0 80 chr2 9802949 9803037 -243453546 + MER52A LTR ERV1 125 205 -1550 * 265 316 51 35 chr2 9803338 9803539 -243453044 + MIR SINE MIR 32 230 -32 402 291 29 0 chr2 9804120 9804223 -243452360 - MIR3 SINE MIR -6 202 97 274 119 0 0 chr2 9804478 9804520 -243452063 - tRNA-Cys-TGC tRNA tRNA -31 44 3 2364 83 0 0 chr2 9804967 9805257 -243451326 + AluSc SINE Alu 1 290 -19 1468 217 70 9 chr2 9805499 9806016 -243450567 - L1MEc LINE L1 -3563 2652 2141 1113 179 21 56 chr2 9806018 9806252 -243450331 - AluJo SINE Alu 0 312 87 4282 264 89 21 chr2 9806252 9806973 -243449610 - L1MEc LINE L1 -4248 2148 1478 2321 103 6 3 chr2 9806973 9807285 -243449298 - AluSq SINE Alu 0 313 1 4282 264 89 21 chr2 9807285 9808543 -243448040 - L1MEc LINE L1 -4918 1478 34 3367 145 104 17 chr2 9808800 9808956 -243447627 - L1MA7 LINE L1 -2 6289 6148 2267 94 0 3 chr2 9808956 9809254 -243447329 - AluSp SINE Alu -16 297 1 3367 145 104 17 chr2 9809254 9809281 -243447302 - L1MA7 LINE L1 -143 6148 6125 4141 168 56 92 chr2 9809281 9810557 -243446026 + Tigger3b DNA MER2_type 1 1230 -1 3367 145 104 17 chr2 9810557 9811123 -243445460 - L1MA7 LINE L1 -166 6125 5474 440 203 4 144 chr2 9811281 9811517 -243445066 - L1MC4 LINE L1 -3 8039 7837 453 241 46 18 chr2 9811554 9811725 -243444858 + L1ME3 LINE L1 5721 5895 -284 1013 128 7 7 chr2 9811725 9811874 -243444709 + AluJb SINE Alu 137 285 -27 302 338 85 52 chr2 9811876 9812148 -243444435 + L1ME3A LINE L1 5860 6140 -30 2093 134 0 3 chr2 9813400 9813699 -243442884 + AluJb SINE Alu 1 298 -14 207 0 0 0 chr2 9813996 9814019 -243442564 + (T)n Simple_repeat Simple_repeat 1 23 0 198 0 0 0 chr2 9814803 9814825 -243441758 + (A)n Simple_repeat Simple_repeat 1 22 0 490 272 83 18 chr2 9816361 9816530 -243440053 - MER5A DNA MER1_type -1 188 9 2123 154 25 18 chr2 9817173 9817570 -243439013 - L1MB3 LINE L1 0 6183 5784 901 185 100 0 chr2 9817643 9817843 -243438740 - L1MB3 LINE L1 -392 5791 5572 314 255 121 25 chr2 9817849 9818006 -243438577 - L1ME4a LINE L1 -1 6120 5949 226 315 27 27 chr2 9818010 9818156 -243438427 - L1ME4a LINE L1 -196 5925 5780 325 276 105 13 chr2 9818157 9818309 -243438274 + L1ME4a LINE L1 5738 5903 -218 374 314 189 30 chr2 9818369 9818434 -243438149 - L2 LINE L2 -561 2753 2700 1967 167 0 6 chr2 9818434 9818745 -243437838 + AluJb SINE Alu 1 309 -3 374 314 189 30 chr2 9818745 9819086 -243437497 - L2 LINE L2 -614 2700 2282 307 250 76 8 chr2 9819123 9819255 -243437328 + L1ME4a LINE L1 5974 6114 -7 271 225 0 50 chr2 9819270 9819367 -243437216 + L1ME4a LINE L1 5692 5771 -350 21 36 0 0 chr2 9819437 9819465 -243437118 + AT_rich Low_complexity Low_complexity 1 28 0 1753 235 56 43 chr2 9820420 9821025 -243435558 - L1ME3A LINE L1 0 6170 5558 2314 57 0 3 chr2 9821262 9821568 -243435015 - AluY SINE Alu 0 305 1 4328 116 49 1 chr2 9822295 9822970 -243433613 - L1PA15 LINE L1 0 6165 5459 24 0 0 0 chr2 9824035 9824059 -243432524 + AT_rich Low_complexity Low_complexity 1 24 0 321 306 65 51 chr2 9824646 9824862 -243431721 + L1MC1 LINE L1 5679 5897 -436 263 244 79 8 chr2 9824908 9825035 -243431548 + L1ME4a LINE L1 5968 6103 -18 1745 177 0 37 chr2 9825071 9825370 -243431213 - AluJo SINE Alu -24 288 1 226 220 44 132 chr2 9826010 9826101 -243430482 - MIR SINE MIR -111 97 15 2353 80 0 6 chr2 9826216 9826529 -243430054 - AluY SINE Alu 0 311 1 296 191 0 0 chr2 9826774 9826821 -243429762 + L2 LINE L2 3218 3264 -8 240 240 0 0 chr2 9827109 9827159 -243429424 + L2 LINE L2 3263 3312 -1 262 253 32 121 chr2 9827543 9827733 -243428850 - L2 LINE L2 -230 3042 2870 1033 224 18 23 chr2 9827878 9828097 -243428486 - MIR SINE MIR -40 222 5 399 203 98 41 chr2 9828305 9828428 -243428155 - MIR SINE MIR -63 145 28 234 266 8 113 chr2 9830047 9830171 -243426412 + L2 LINE L2 2926 3036 -236 266 282 14 0 chr2 9830320 9830391 -243426192 + MIR SINE MIR 183 254 -8 282 293 41 49 chr2 9830404 9830527 -243426056 + L2 LINE L2 3151 3272 0 215 373 0 0 chr2 9830685 9830744 -243425839 + L3 LINE CR1 1504 1562 -15 539 208 0 0 chr2 9831588 9831694 -243424889 - L1MD3 LINE L1 -158 7837 7732 338 263 25 24 chr2 9831966 9832080 -243424503 + MIR SINE MIR 9 130 -78 283 109 91 0 chr2 9833348 9833403 -243423180 - L1MC/D LINE L1 -897 5462 5403 2900 214 110 10 chr2 9833417 9834406 -243422177 + L1ME1 LINE L1 5072 6158 -8 2130 98 6 28 chr2 9835011 9835328 -243421255 - AluSp SINE Alu -3 310 1 221 296 56 0 chr2 9835643 9835697 -243420886 - L2 LINE L2 -13 3300 3244 222 330 97 10 chr2 9835825 9835928 -243420655 - L2 LINE L2 -2 3270 3159 199 236 135 67 chr2 9835930 9835973 -243420610 - MIR3 SINE MIR -105 103 64 2680 10 0 0 chr2 9835973 9836272 -243420311 + AluYa5 SINE Alu 1 299 -12 199 236 135 67 chr2 9836272 9836317 -243420266 - MIR3 SINE MIR -144 64 9 473 228 0 78 chr2 9837602 9837782 -243418801 - L1MC3 LINE L1 -72 7713 7548 1689 242 82 50 chr2 9838306 9838942 -243417641 - L1MC4 LINE L1 -162 7880 7225 1736 149 4 4 chr2 9839299 9839574 -243417009 - AluJo SINE Alu -37 275 1 207 250 175 25 chr2 9840068 9840148 -243416435 + MIR3 SINE MIR 76 167 -41 315 345 61 20 chr2 9840270 9840418 -243416165 + MIR SINE MIR 12 165 -97 * 1457 224 49 75 chr2 9840413 9841001 -243415582 + L2 LINE L2 2726 3313 0 242 198 229 62 chr2 9841005 9841101 -243415482 + MIR SINE MIR 151 262 0 1940 120 24 0 chr2 9841147 9841439 -243415144 + AluSx SINE Alu 3 301 -11 2329 68 3 3 chr2 9841579 9841875 -243414708 + AluSp SINE Alu 1 296 -17 35 24 0 0 chr2 9843277 9843319 -243413264 + AT_rich Low_complexity Low_complexity 1 42 0 2268 72 7 0 chr2 9843342 9843634 -243412949 + AluY SINE Alu 1 294 -17 302 207 207 12 chr2 9843636 9843718 -243412865 - MIR SINE MIR -100 162 65 204 191 0 32 chr2 9843719 9843782 -243412801 + T-rich Low_complexity Low_complexity 1 61 0 635 303 61 39 chr2 9844185 9844597 -243411986 + L1MEc LINE L1 778 1198 -5940 917 207 66 4 chr2 9844753 9844976 -243411607 - L1ME1 LINE L1 0 6178 5948 520 286 46 14 chr2 9845000 9845261 -243411322 + L1MEc LINE L1 1331 1467 -5392 2085 113 0 0 chr2 9845261 9845553 -243411030 + AluSx SINE Alu 1 292 -20 520 286 46 14 chr2 9845553 9845580 -243411003 + L1MEc LINE L1 1467 1492 -5367 2082 118 7 0 chr2 9845941 9846228 -243410355 - AluSx SINE Alu -23 289 1 715 295 106 12 chr2 9846403 9846725 -243409858 - L1ME1 LINE L1 -234 5887 5536 201 279 0 40 chr2 9847570 9847873 -243408710 + (CGGG)n Simple_repeat Simple_repeat 1 290 0 426 317 0 28 chr2 9848031 9848211 -243408372 + (CGGG)n Simple_repeat Simple_repeat 4 178 0 360 344 0 32 chr2 9848226 9848412 -243408171 + (CGGG)n Simple_repeat Simple_repeat 1 180 0 289 333 0 32 chr2 9848487 9848673 -243407910 + (CGGG)n Simple_repeat Simple_repeat 1 180 0 440 324 0 27 chr2 9848876 9849061 -243407522 + (CGGG)n Simple_repeat Simple_repeat 1 180 0 279 359 0 28 chr2 9849161 9849342 -243407241 + (CGGG)n Simple_repeat Simple_repeat 1 176 0 383 352 0 29 chr2 9849666 9850132 -243406451 + (CGGG)n Simple_repeat Simple_repeat 1 452 0 439 323 0 28 chr2 9850161 9850532 -243406051 + (CGGG)n Simple_repeat Simple_repeat 1 360 0 308 344 0 27 chr2 9850555 9850738 -243405845 + (TGGG)n Simple_repeat Simple_repeat 1 178 0 240 356 0 28 chr2 9850707 9850887 -243405696 + (CGGG)n Simple_repeat Simple_repeat 2 176 0 * 2167 104 0 13 chr2 9851245 9851544 -243405039 - AluSq SINE Alu -17 296 2 462 341 75 6 chr2 9852347 9852520 -243404063 + MIR SINE MIR 21 205 -57 231 367 37 18 chr2 9852587 9852696 -243403887 - L2 LINE L2 -21 3251 3141 325 236 176 23 chr2 9852736 9852907 -243403676 - MIR SINE MIR -31 231 34 188 270 167 16 chr2 9853444 9853570 -243403013 - L2 LINE L2 -173 3099 2955 346 301 0 0 chr2 9853616 9853699 -243402884 - MIR SINE MIR -95 113 31 638 273 94 88 chr2 9853885 9854126 -243402457 + L1MC4a LINE L1 5374 5612 -2196 2035 122 0 0 chr2 9854126 9854422 -243402161 + AluSq SINE Alu 9 304 -9 638 273 94 88 chr2 9854422 9854851 -243401732 + L1MC4a LINE L1 5612 6048 -1760 2147 103 7 0 chr2 9854929 9855229 -243401354 - AluSx SINE Alu -9 303 2 1660 159 37 10 chr2 9855312 9855437 -243401146 + AluJb SINE Alu 1 121 -191 192 77 0 0 chr2 9855437 9855463 -243401120 + (CA)n Simple_repeat Simple_repeat 2 27 0 1660 159 37 10 chr2 9855463 9855633 -243400950 + AluJb SINE Alu 121 304 -8 459 293 110 62 chr2 9855971 9856261 -243400322 - L2 LINE L2 -3 3269 2966 280 244 56 0 chr2 9856454 9856544 -243400039 + MER113 DNA MER1_type? 7 101 -420 2243 106 0 0 chr2 9856572 9856883 -243399700 + AluSx SINE Alu 1 311 -1 1881 245 179 15 chr2 9857100 9857901 -243398682 + L2 LINE L2 2002 2933 -381 225 308 133 8 chr2 9857982 9858102 -243398481 + L2 LINE L2 3136 3270 -43 25 0 0 0 chr2 9858207 9858232 -243398351 + GC_rich Low_complexity Low_complexity 1 25 0 230 274 16 65 chr2 9858509 9858695 -243397888 + G-rich Low_complexity Low_complexity 4 180 0 24 0 0 0 chr2 9859198 9859222 -243397361 + GC_rich Low_complexity Low_complexity 1 24 0 24 32 0 0 chr2 9859267 9859298 -243397285 + GC_rich Low_complexity Low_complexity 1 31 0 306 220 114 53 chr2 9859921 9860053 -243396530 + L1MD3 LINE L1 7856 7995 0 303 271 19 0 chr2 9863447 9863554 -243393029 - L1MC4 LINE L1 0 8042 7934 1068 148 13 91 chr2 9863636 9863866 -243392717 + AluJb SINE Alu 83 294 -18 1532 188 40 13 chr2 9864316 9864619 -243391964 - AluJo SINE Alu -1 311 1 2239 78 0 7 chr2 9864742 9865037 -243391546 - AluSc SINE Alu -16 293 1 1675 146 7 29 chr2 9865491 9865799 -243390784 - AluJb SINE Alu -1 311 11 226 252 81 27 chr2 9866961 9867072 -243389511 - L1MC5 LINE L1 -54 7907 7791 2289 96 0 0 chr2 9867485 9867797 -243388786 + AluSq SINE Alu 1 312 -1 675 255 192 5 chr2 9867843 9868051 -243388532 - MIR SINE MIR 0 262 16 185 216 81 0 chr2 9870134 9870171 -243386412 + MIR3 SINE MIR 139 178 -30 995 169 22 38 chr2 9870511 9870694 -243385889 - MER58A DNA MER1_type -1 223 44 395 340 33 0 chr2 9872302 9872455 -243384128 + MIR3 SINE MIR 44 201 -7 274 304 81 31 chr2 9872914 9873124 -243383459 + MIR SINE MIR 44 262 0 2125 112 0 13 chr2 9873444 9873749 -243382834 + AluSx SINE Alu 1 301 -11 260 95 0 0 chr2 9875221 9875263 -243381320 - L1MA6 LINE L1 -4 6296 6255 194 211 0 26 chr2 9876579 9876617 -243379966 - L2 LINE L2 -25 3247 3211 2433 53 0 3 chr2 9877171 9877471 -243379112 - AluY SINE Alu -12 299 1 268 293 10 30 chr2 9881428 9881527 -243375056 + MIR3 SINE MIR 2 98 -110 211 267 152 19 chr2 9882104 9882209 -243374374 - L2 LINE L2 0 3313 3195 1966 128 0 28 chr2 9882923 9883243 -243373340 + AluSq SINE Alu 1 311 -2 473 189 57 9 chr2 9883249 9883355 -243373228 + MIR SINE MIR 78 188 -74 2036 112 0 7 chr2 9884654 9884948 -243371635 - AluSx SINE Alu -20 292 1 2358 100 39 30 chr2 9885156 9885517 -243371066 - THE1B LTR MaLR 0 364 1 2207 92 0 0 chr2 9886033 9886327 -243370256 + AluSq SINE Alu 1 294 -19 1217 89 48 0 chr2 9886329 9886497 -243370086 + AluSg/x SINE Alu 126 301 -9 1587 126 4 16 chr2 9886558 9886812 -243369771 - AluJo SINE Alu -10 302 52 566 236 185 34 chr2 9888799 9888977 -243367606 + MER58A DNA MER1_type 5 209 -15 185 314 229 0 chr2 9889082 9889187 -243367396 - L2 LINE L2 -5 3267 3139 395 204 31 122 chr2 9889668 9889864 -243366719 + MER5B DNA MER1_type 1 178 0 669 191 107 6 chr2 9889876 9890044 -243366539 - MER5A DNA MER1_type -4 185 1 2084 87 10 27 chr2 9891199 9891498 -243365085 + AluSq SINE Alu 1 294 -19 1747 158 7 20 chr2 9892104 9892407 -243364176 + AluJb SINE Alu 1 299 -13 1865 123 3 3 chr2 9893735 9894042 -243362541 - AluSx SINE Alu 0 307 1 1331 197 0 4 chr2 9894049 9894298 -243362285 - AluJb SINE Alu -30 282 35 1858 134 24 3 chr2 9894307 9894597 -243361986 - AluSx SINE Alu -16 296 1 1586 260 65 88 chr2 9895426 9896199 -243360384 - L1MEc LINE L1 -5605 791 37 2044 114 10 7 chr2 9896875 9897174 -243359409 - AluSx SINE Alu -12 300 1 2232 90 3 7 chr2 9897474 9897775 -243358808 - AluSq SINE Alu -13 300 1 21 0 0 0 chr2 9899307 9899328 -243357255 + AT_rich Low_complexity Low_complexity 1 21 0 690 306 5 5 chr2 9900155 9900354 -243356229 - MER58A DNA MER1_type 0 224 26 189 0 0 0 chr2 9900579 9900600 -243355983 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 280 180 0 0 chr2 9900607 9900657 -243355926 - L1MC4 LINE L1 -10 8032 7983 1765 234 158 1 chr2 9900658 9901331 -243355252 - L1MC4 LINE L1 -142 7900 6974 963 182 0 0 chr2 9901459 9901635 -243354948 - FRAM SINE Alu -2 174 1 378 0 0 0 chr2 9901635 9901677 -243354906 + (TTA)n Simple_repeat Simple_repeat 2 43 0 239 146 0 0 chr2 9901679 9901720 -243354863 - Alu SINE Alu -240 80 40 1691 140 48 24 chr2 9902634 9902926 -243353657 + AluJb SINE Alu 1 299 -13 262 300 108 23 chr2 9902965 9903095 -243353488 + MIR3 SINE MIR 22 162 -46 495 281 79 35 chr2 9904462 9904690 -243351893 - L2 LINE L2 -4 3309 3072 2233 81 13 3 chr2 9904864 9905173 -243351410 + AluSx SINE Alu 1 312 0 225 0 0 0 chr2 9905749 9905774 -243350809 + (TG)n Simple_repeat Simple_repeat 2 26 0 * 1011 161 0 0 chr2 9905773 9905953 -243350630 + (TA)n Simple_repeat Simple_repeat 1 180 0 239 172 62 0 chr2 9905958 9906022 -243350561 - L1MC4 LINE L1 -1339 6703 6636 207 170 43 0 chr2 9906953 9907000 -243349583 + T-rich Low_complexity Low_complexity 4 52 0 1616 188 0 7 chr2 9907102 9907390 -243349193 - AluJo SINE Alu -14 298 13 703 276 35 43 chr2 9907431 9907663 -243348920 - MIR SINE MIR 0 262 33 27 0 0 0 chr2 9908526 9908553 -243348030 + AT_rich Low_complexity Low_complexity 1 27 0 240 320 72 0 chr2 9910179 9910276 -243346307 + L2 LINE L2 3163 3266 -6 581 288 81 0 chr2 9910462 9910622 -243345961 + L2 LINE L2 2598 2770 -544 905 289 48 38 chr2 9910906 9911300 -243345283 + ERVL LTR ERVL 2572 2969 -2795 470 305 5 63 chr2 9911303 9911526 -243345057 + L2 LINE L2 3077 3286 -27 375 274 41 20 chr2 9911769 9911915 -243344668 + LTR33 LTR ERVL 373 521 0 366 193 181 0 chr2 9911986 9912069 -243344514 + LTR33 LTR ERVL 2 99 -422 741 140 171 49 chr2 9912103 9912267 -243344316 + MLT2B2 LTR ERVL 320 503 -12 1188 223 34 10 chr2 9912278 9912634 -243343949 + ERVL LTR ERVL 6 394 -5288 4630 104 20 40 chr2 9912681 9913383 -243343200 - LTR12 LTR ERV1 0 688 1 708 219 45 52 chr2 9913566 9913854 -243342729 - pTR5 LTR ERV1 -1410 1028 743 1289 161 135 15 chr2 9914325 9914464 -243342119 - AluJo SINE Alu -10 292 171 321 26 0 0 chr2 9914464 9914502 -243342081 + (TTA)n Simple_repeat Simple_repeat 2 39 0 1289 161 135 15 chr2 9914502 9914622 -243341961 - AluJo SINE Alu -131 171 2 3351 242 53 41 chr2 9914871 9915900 -243340683 - L1M4 LINE L1 -5274 1268 227 826 239 78 58 chr2 9915900 9916260 -243340323 + L1ME2 LINE L1 5789 6155 -9 477 297 0 32 chr2 9917671 9917856 -243338727 + (CGGG)n Simple_repeat Simple_repeat 2 180 0 394 341 0 30 chr2 9917874 9918684 -243337899 + (CGGG)n Simple_repeat Simple_repeat 1 785 0 390 306 0 38 chr2 9918739 9918922 -243337661 + (CGGG)n Simple_repeat Simple_repeat 1 176 0 484 280 0 33 chr2 9919034 9919216 -243337367 + (CGGG)n Simple_repeat Simple_repeat 1 176 0 440 340 0 27 chr2 9919246 9919656 -243336927 + (CGGG)n Simple_repeat Simple_repeat 1 398 0 383 333 0 27 chr2 9919632 9919815 -243336768 + (TGGG)n Simple_repeat Simple_repeat 1 178 0 * 250 374 0 25 chr2 9919849 9920012 -243336571 + (CGGG)n Simple_repeat Simple_repeat 2 160 0 225 0 0 0 chr2 9920667 9920692 -243335891 + (TG)n Simple_repeat Simple_repeat 2 26 0 * 1011 161 0 0 chr2 9920691 9920871 -243335712 + (TA)n Simple_repeat Simple_repeat 1 180 0 226 133 0 0 chr2 9920896 9920941 -243335642 - LTR66 LTR ERVL -171 439 395 345 304 0 22 chr2 9920942 9921034 -243335549 + L1MC4 LINE L1 6614 6703 -1339 412 188 1 79 chr2 9921042 9921152 -243335431 - L1MC4 LINE L1 -1339 6983 1988 1990 125 17 0 chr2 9921656 9921945 -243334638 - AluSg SINE Alu -16 294 1 765 233 43 70 chr2 9922049 9922616 -243333967 - L1MC5 LINE L1 -30 7931 7331 1848 87 128 0 chr2 9922627 9922893 -243333690 + AluSx SINE Alu 1 300 -12 255 158 0 70 chr2 9922896 9922953 -243333630 - L1MC5 LINE L1 -610 7351 7299 * 23726 70 16 9 chr2 9922945 9925214 -243331369 - L1PA6 LINE L1 -2 6152 3901 288 0 0 0 chr2 9925214 9925246 -243331337 + (TTG)n Simple_repeat Simple_repeat 2 33 0 2143 82 0 0 chr2 9925248 9925529 -243331054 - AluY SINE Alu -30 281 1 23726 70 16 9 chr2 9925529 9929356 -243327227 - L1PA6 LINE L1 -2253 3901 12 255 250 0 83 chr2 9930351 9930459 -243326124 + L1P LINE L1 4951 5049 -1097 296 291 112 24 chr2 9930527 9930612 -243325971 + L1ME1 LINE L1 5255 5331 -2477 2646 56 0 0 chr2 9930612 9930918 -243325665 + AluY SINE Alu 1 306 -5 296 291 112 24 chr2 9930918 9931038 -243325545 + L1ME1 LINE L1 5331 5478 -2330 803 287 95 31 chr2 9931092 9931704 -243324879 - L2 LINE L2 0 3313 2656 1894 151 26 3 chr2 9931798 9932102 -243324481 - AluJb SINE Alu -1 311 1 21 0 0 0 chr2 9932111 9932132 -243324451 + AT_rich Low_complexity Low_complexity 1 21 0 2429 55 17 0 chr2 9932137 9932428 -243324155 - AluY SINE Alu -15 296 1 791 164 0 22 chr2 9932673 9932807 -243323776 - FLAM_C SINE Alu -2 131 1 1399 181 8 17 chr2 9932807 9933099 -243323484 + L1ME1 LINE L1 5575 5856 -312 690 178 55 7 chr2 9933864 9934010 -243322573 + MER5A DNA MER1_type 1 153 -36 2072 126 0 10 chr2 9934629 9934923 -243321660 + AluSx SINE Alu 5 295 -17 186 71 0 0 chr2 9936873 9936901 -243319682 + (TTTTG)n Simple_repeat Simple_repeat 4 31 0 362 293 149 14 chr2 9937495 9937710 -243318873 - MIR SINE MIR -4 258 15 205 356 30 10 chr2 9938274 9938375 -243318208 + L2 LINE L2 2900 3002 -270 2298 81 0 33 chr2 9939187 9939494 -243317089 + AluSx SINE Alu 1 297 -15 203 358 46 18 chr2 9990385 9990494 -243266089 - MER5A DNA MER1_type -30 159 48 298 297 0 0 chr2 9990539 9990613 -243265970 - MER5B DNA MER1_type 0 178 105 180 0 0 0 chr2 9991129 9991149 -243265434 + (T)n Simple_repeat Simple_repeat 1 20 0 2222 84 30 0 chr2 9991322 9991618 -243264965 + AluSq SINE Alu 1 305 -8 355 280 37 112 chr2 9992053 9992267 -243264316 + L1MEd LINE L1 867 1064 -5055 487 195 46 0 chr2 9992647 9992734 -243263849 + 7SLRNA srpRNA srpRNA 1 91 -229 1488 173 14 25 chr2 9993923 9994207 -243262376 + AluJo SINE Alu 11 291 -21 309 316 65 7 chr2 9994334 9994489 -243262094 + MLT1K LTR MaLR 357 520 -68 241 319 64 0 chr2 9994542 9994636 -243261947 - MIR SINE MIR -68 194 95 1904 131 7 13 chr2 9995423 9995593 -243260990 - AluSx SINE Alu -9 303 134 2222 97 3 0 chr2 9995593 9995892 -243260691 - AluSp SINE Alu -13 300 1 1904 131 7 13 chr2 9995892 9996026 -243260557 - AluSx SINE Alu -178 134 1 242 311 59 17 chr2 9996069 9996188 -243260395 + MIR SINE MIR 73 196 -66 549 241 45 75 chr2 9996208 9996251 -243260332 - L1MB8 LINE L1 -27 6151 6108 2136 106 7 0 chr2 9996251 9996543 -243260040 + AluSx SINE Alu 1 294 -18 549 241 45 75 chr2 9996543 9996698 -243259885 - L1MB8 LINE L1 -70 6108 5959 814 216 154 10 chr2 9997297 9997392 -243259191 + MER58 DNA MER1_type 1 81 -260 2268 87 3 6 chr2 9997392 9997703 -243258880 + AluY SINE Alu 1 310 -1 814 216 154 10 chr2 9997703 9997815 -243258768 + MER58 DNA MER1_type 81 238 -103 199 346 59 10 chr2 9998614 9998715 -243257868 + MIR3 SINE MIR 13 118 -90 207 0 0 0 chr2 9999203 9999226 -243257357 + (CTGGGG)n Simple_repeat Simple_repeat 2 24 0 374 289 209 13 chr2 9999236 9999841 -243256742 - L2 LINE L2 -9 3304 2564 2119 98 0 0 chr2 10000288 10000598 -243255985 - AluY SINE Alu 0 311 1 493 291 126 54 chr2 10000607 10000957 -243255626 + L2 LINE L2 2896 3270 -2 2247 79 10 0 chr2 10001100 10001391 -243255192 - AluSc SINE Alu -15 294 1 224 175 16 32 chr2 10002479 10002542 -243254041 + GA-rich Low_complexity Low_complexity 1 62 0 260 313 0 49 chr2 10002823 10002967 -243253616 + MER112 DNA MER1_type 118 254 -6 440 286 16 8 chr2 10003570 10003696 -243252887 - MIR SINE MIR -121 141 15 349 274 20 20 chr2 10003764 10003866 -243252717 + MER5B DNA MER1_type 77 178 0 2134 105 13 0 chr2 10004372 10004676 -243251907 - AluSc SINE Alu -1 308 1 1495 144 83 11 chr2 10004700 10004989 -243251594 - AluJo SINE Alu 0 308 1 474 222 0 0 chr2 10005000 10005081 -243251502 - AluJ/FLAM SINE Alu -228 84 4 903 281 106 59 chr2 10005252 10005288 -243251295 - HAL1b LINE L1 -461 887 854 2236 113 3 0 chr2 10005288 10005599 -243250984 + AluSx SINE Alu 1 312 0 903 281 106 59 chr2 10005599 10006346 -243250237 - HAL1b LINE L1 -494 854 67 2132 117 0 0 chr2 10006555 10006854 -243249729 - AluSx SINE Alu -13 299 1 888 129 0 0 chr2 10007457 10007589 -243248994 + AluSq/x SINE Alu 1 132 -181 2206 97 3 0 chr2 10007591 10007890 -243248693 + AluY SINE Alu 1 300 -11 2453 232 68 55 chr2 10007951 10008242 -243248341 - L1ME1 LINE L1 -5 6161 5875 2222 88 7 3 chr2 10008242 10008538 -243248045 - AluSq SINE Alu -16 297 1 2453 232 68 55 chr2 10008538 10008721 -243247862 - L1ME1 LINE L1 -291 5875 5696 2091 106 3 13 chr2 10008721 10009023 -243247560 - AluSg SINE Alu -11 299 1 2453 232 68 55 chr2 10009023 10009363 -243247220 - L1ME1 LINE L1 -470 5696 5322 2322 90 0 0 chr2 10009363 10009673 -243246910 - AluY SINE Alu -1 310 1 2453 232 68 55 chr2 10009673 10009898 -243246685 - L1ME1 LINE L1 -844 5322 5101 1889 154 20 0 chr2 10009902 10010208 -243246375 - AluSx SINE Alu 0 312 1 1182 148 118 4 chr2 10010238 10010475 -243246108 + L1M2 LINE L1 5509 5772 -540 2044 129 0 7 chr2 10010475 10010769 -243245814 + AluSx SINE Alu 1 292 -20 323 208 57 9 chr2 10010794 10010900 -243245683 - L1ME1 LINE L1 -1095 5051 4941 1045 196 30 4 chr2 10011256 10011491 -243245092 + L1MB4 LINE L1 5940 6180 0 2014 101 0 80 chr2 10011617 10011943 -243244640 + AluSx SINE Alu 1 300 -12 2373 66 3 3 chr2 10012114 10012419 -243244164 - AluSp SINE Alu -6 307 3 1396 74 133 0 chr2 10013562 10013765 -243242818 + MER30 DNA MER1_type 1 230 0 186 43 0 0 chr2 10014064 10014087 -243242496 + (ATTG)n Simple_repeat Simple_repeat 1 23 0 1566 149 18 21 chr2 10014088 10014369 -243242214 - AluJb SINE Alu -32 280 1 2410 73 0 6 chr2 10014438 10014755 -243241828 - AluYb8 SINE Alu -3 315 1 1113 263 77 27 chr2 10014762 10015203 -243241380 - L1ME3A LINE L1 -6 6164 5702 189 178 0 0 chr2 10015374 10015419 -243241164 + (TGAA)n Simple_repeat Simple_repeat 3 47 0 341 338 47 27 chr2 10015463 10015611 -243240972 - MIR SINE MIR -15 247 97 262 267 130 8 chr2 10015601 10015732 -243240851 + MIR SINE MIR 96 242 -20 * 190 261 43 0 chr2 10015767 10015813 -243240770 - MIR SINE MIR -174 88 41 306 232 14 0 chr2 10017047 10017116 -243239467 + MER103 DNA DNA 17 86 -80 1811 146 34 3 chr2 10018488 10018783 -243237800 - AluJb SINE Alu -8 304 1 381 206 0 0 chr2 10019021 10019123 -243237460 + (CA)n Simple_repeat Simple_repeat 1 102 0 253 311 61 2 chr2 10019200 10019319 -243237264 - MIR SINE MIR -56 152 28 274 276 92 10 chr2 10019793 10019891 -243236692 + MIR SINE MIR 11 116 -146 346 266 37 0 chr2 10020125 10020234 -243236349 + MIR3 SINE MIR 44 156 -52 338 136 15 30 chr2 10020919 10020985 -243235598 + MIR SINE MIR 81 145 -63 257 314 99 8 chr2 10021231 10021352 -243235231 + MIR SINE MIR 28 159 -103 417 190 0 0 chr2 10021427 10021527 -243235056 + (TG)n Simple_repeat Simple_repeat 1 100 0 418 262 160 27 chr2 10021637 10021862 -243234721 + MIR SINE MIR 8 262 0 1506 154 4 0 chr2 10022435 10022675 -243233908 - AluJb SINE Alu -71 241 1 191 329 150 7 chr2 10023092 10023232 -243233351 + L3 LINE CR1 1138 1297 -280 259 289 168 13 chr2 10023974 10024123 -243232460 - MIR SINE MIR -70 192 21 257 333 23 0 chr2 10024589 10024676 -243231907 + L2 LINE L2 3182 3270 -2 1185 160 14 89 chr2 10025476 10025757 -243230826 + MER31A LTR ERV1 216 475 -10 1830 139 13 30 chr2 10026399 10026702 -243229881 - AluJb SINE Alu -14 298 1 333 342 9 0 chr2 10029230 10029341 -243227242 - L2 LINE L2 -22 3291 3180 206 208 43 86 chr2 10029529 10029643 -243226940 + MIR SINE MIR 14 120 -88 693 217 14 0 chr2 10030177 10030320 -243226263 - MER45A DNA AcHobo -31 147 3 621 228 70 6 chr2 10030462 10030620 -243225963 + MIR SINE MIR 23 190 -72 1028 240 89 12 chr2 10031390 10031719 -243224864 + MLT1A2 LTR MaLR 3 450 -17 1746 147 40 17 chr2 10032015 10032315 -243224268 + AluJo SINE Alu 1 307 -5 277 239 11 11 chr2 10032489 10032502 -243224081 - L1MA10 LINE L1 -1 6333 6321 1744 227 37 64 chr2 10032502 10032789 -243223794 - L1ME3 LINE L1 -4 6158 5865 3214 147 18 72 chr2 10032789 10033024 -243223559 - L1MB3 LINE L1 -7 6176 5930 1921 124 3 29 chr2 10033024 10033330 -243223253 - AluSx SINE Alu -14 298 1 3214 147 18 72 chr2 10033330 10033695 -243222888 - L1MB3 LINE L1 -253 5930 5613 2326 66 3 0 chr2 10033695 10033983 -243222600 - AluSp SINE Alu -15 298 10 3214 147 18 72 chr2 10033983 10034048 -243222535 - L1MB3 LINE L1 -570 5613 5546 1744 227 37 64 chr2 10034048 10034350 -243222233 - L1ME3 LINE L1 -297 5865 5585 2056 121 0 0 chr2 10034388 10034717 -243221866 + AluSx SINE Alu 1 329 0 229 197 66 0 chr2 10034724 10034785 -243221798 - L1ME LINE L1 -205 5916 5852 * 991 266 80 17 chr2 10034781 10035130 -243221453 - L1MD2 LINE L1 -2 6357 5987 240 163 0 0 chr2 10035131 10035174 -243221409 + CT-rich Low_complexity Low_complexity 1 43 0 1159 143 0 0 chr2 10035174 10035342 -243221241 - AluSx SINE Alu -140 172 5 2346 54 0 17 chr2 10035346 10035644 -243220939 - AluY SINE Alu -12 299 7 2148 127 0 0 chr2 10035648 10035947 -243220636 - AluSx SINE Alu -13 299 1 1368 236 58 42 chr2 10035977 10036134 -243220449 - L1MD2 LINE L1 -365 5994 5841 2125 184 17 0 chr2 10036134 10036493 -243220090 + MLT1A1 LTR MaLR 1 365 0 1368 236 58 42 chr2 10036493 10036575 -243220008 - L1MD2 LINE L1 -518 5841 5762 2120 107 7 0 chr2 10036575 10036875 -243219708 - AluSx SINE Alu -10 302 1 1368 236 58 42 chr2 10036875 10037016 -243219567 - L1MD2 LINE L1 -597 5762 5607 319 289 0 12 chr2 10037026 10037109 -243219474 - Tigger5 DNA MER2_type 0 2323 2242 * 580 176 0 4 chr2 10037085 10037225 -243219358 - Tigger5 DNA MER2_type -2129 194 3 210 37 0 0 chr2 10038178 10038205 -243218378 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2006 121 3 0 chr2 10038209 10038491 -243218092 - AluSx SINE Alu -29 283 1 555 245 41 0 chr2 10038565 10038712 -243217871 - MIR SINE MIR -43 219 67 527 202 110 140 chr2 10038754 10038962 -243217621 - L1M4 LINE L1 -2884 3262 3049 226 125 100 0 chr2 10038962 10039002 -243217581 - Alu SINE Alu -195 107 64 * 259 114 0 0 chr2 10038970 10039005 -243217578 - AluJ/FLAM SINE Alu -207 95 61 * 527 202 110 140 chr2 10039002 10039126 -243217457 - L1M4 LINE L1 -3097 3049 2902 1896 153 0 6 chr2 10039177 10039490 -243217093 - AluJo SINE Alu -1 311 1 1434 117 0 61 chr2 10039555 10039828 -243216755 + AluSg/x SINE Alu 76 312 0 355 163 12 75 chr2 10039847 10039927 -243216656 + MLT1E2 LTR MaLR 393 626 0 694 161 0 9 chr2 10039965 10040077 -243216506 + FLAM_A SINE Alu 25 135 -7 1793 151 27 3 chr2 10040320 10040619 -243215964 + AluJo SINE Alu 1 306 -6 614 133 0 14 chr2 10040992 10041232 -243215351 + AluSx SINE Alu 1 294 -18 2381 70 0 13 chr2 10041232 10041545 -243215038 + AluY SINE Alu 1 309 -2 343 200 8 144 chr2 10041818 10041943 -243214640 - MER81 DNA DNA 0 114 7 226 291 58 0 chr2 10042198 10042284 -243214299 - MIR3 SINE MIR -27 181 91 193 292 14 56 chr2 10042313 10042385 -243214198 + MIR3 SINE MIR 4 72 -136 255 150 0 0 chr2 10042660 10042720 -243213863 + (GA)n Simple_repeat Simple_repeat 2 61 0 205 262 12 48 chr2 10043127 10043211 -243213372 + C-rich Low_complexity Low_complexity 1 81 0 328 282 0 13 chr2 10043570 10043648 -243212935 + MIR3 SINE MIR 81 157 -51 1513 72 0 43 chr2 10043671 10043879 -243212704 - AluSc SINE Alu -110 199 1 298 313 87 33 chr2 10044030 10044180 -243212403 + MIR SINE MIR 105 262 0 196 268 56 14 chr2 10045068 10045139 -243211444 + MIR SINE MIR 111 184 -78 868 196 16 37 chr2 10045305 10045494 -243211089 + MER5A DNA MER1_type 5 189 0 1364 226 36 33 chr2 10045669 10046031 -243210552 - MLT1B LTR MaLR -11 379 17 181 290 224 28 chr2 10046484 10046591 -243209992 - MIR SINE MIR -115 147 20 268 336 80 0 chr2 10047066 10047191 -243209392 + MIR SINE MIR 79 213 -49 310 330 52 0 chr2 10047220 10047317 -243209266 + L2 LINE L2 3159 3260 -12 844 142 17 17 chr2 10047355 10047531 -243209052 + (ATGGTG)n Simple_repeat Simple_repeat 1 176 0 954 157 0 0 chr2 10047540 10047718 -243208865 + (TGG)n Simple_repeat Simple_repeat 3 180 0 704 148 11 28 chr2 10047736 10047912 -243208671 + (ATGGTG)n Simple_repeat Simple_repeat 1 173 0 725 184 0 17 chr2 10047946 10048120 -243208463 + (ATGGTG)n Simple_repeat Simple_repeat 3 173 0 487 209 0 37 chr2 10048157 10048320 -243208263 + (ATGGTG)n Simple_repeat Simple_repeat 4 160 0 244 246 15 15 chr2 10048703 10048768 -243207815 + MIR SINE MIR 56 120 -142 308 314 81 0 chr2 10050583 10050707 -243205876 + LTR33 LTR ERVL 45 178 -343 311 348 35 0 chr2 10050823 10050964 -243205619 + LTR33 LTR ERVL 344 489 -32 1297 165 4 17 chr2 10055830 10056067 -243200516 - AluJb SINE Alu -15 297 64 1508 168 10 1 chr2 10056067 10056465 -243200118 - LTR19A LTR ERV1 -6 480 1 917 134 6 0 chr2 10056465 10056641 -243199942 - HERVFH19I LTR ERV1 0 7719 4796 * 8347 178 50 42 chr2 10056640 10056924 -243199659 - HERVFH19I LTR ERV1 -283 5417 5137 2458 71 3 0 chr2 10056924 10057234 -243199349 + AluY SINE Alu 1 311 0 8347 178 50 42 chr2 10057234 10057267 -243199316 - HERVFH19I LTR ERV1 -563 5137 5106 2015 131 3 0 chr2 10057267 10057557 -243199026 - AluSq SINE Alu -22 291 1 8347 178 50 42 chr2 10057557 10058289 -243198294 - HERVFH19I LTR ERV1 -594 5106 4382 2171 118 0 6 chr2 10058289 10058603 -243197980 + AluSx SINE Alu 1 312 0 8347 178 50 42 chr2 10058603 10059746 -243196837 - HERVFH19I LTR ERV1 -1318 4382 2865 2749 118 98 0 chr2 10059805 10060246 -243196337 - LTR19A LTR ERV1 0 486 3 480 151 0 0 chr2 10060248 10060321 -243196262 - AluJ/FLAM SINE Alu -238 74 2 645 229 42 31 chr2 10060698 10060890 -243195693 + MIR SINE MIR 14 207 -55 2049 108 0 7 chr2 10060893 10061181 -243195402 + AluSg SINE Alu 1 286 -24 237 33 0 0 chr2 10061181 10061211 -243195372 + (CATA)n Simple_repeat Simple_repeat 2 31 0 259 216 21 52 chr2 10061449 10061546 -243195037 + LTR67 LTR ERVL 442 535 -22 393 288 36 7 chr2 10061677 10061816 -243194767 - L2 LINE L2 -181 3091 2949 2082 125 0 3 chr2 10063104 10063417 -243193166 - AluSx SINE Alu 0 312 1 2077 77 0 0 chr2 10063426 10063687 -243192896 + AluY SINE Alu 38 298 -13 554 256 54 22 chr2 10063687 10063910 -243192673 + L1ME2 LINE L1 5598 5827 -337 362 310 152 17 chr2 10063917 10064399 -243192184 + L1MEc LINE L1 1150 1664 -4551 573 330 86 23 chr2 10064468 10065167 -243191416 + L2 LINE L2 2313 3080 -192 1993 156 0 6 chr2 10066468 10066782 -243189801 - AluSx SINE Alu 0 312 1 399 127 0 0 chr2 10067000 10067063 -243189520 + (TG)n Simple_repeat Simple_repeat 2 64 0 1515 180 171 3 chr2 10068150 10068466 -243188117 + MLT1A2 LTR MaLR 3 371 -3 1568 261 105 10 chr2 10068468 10068873 -243187710 + L1ME3A LINE L1 4929 5294 -868 1960 147 0 0 chr2 10068873 10069172 -243187411 + AluSx SINE Alu 1 299 -13 1568 261 105 10 chr2 10069172 10069339 -243187244 + L1ME3A LINE L1 5294 5444 -718 2865 147 20 29 chr2 10069339 10069828 -243186755 + MER66B LTR ERV1 2 486 0 1568 261 105 10 chr2 10069828 10070099 -243186484 + L1ME3A LINE L1 5444 5853 -309 1795 166 13 0 chr2 10070158 10070466 -243186117 + AluJb SINE Alu 1 312 0 515 182 42 7 chr2 10070468 10070611 -243185972 + GA-rich Low_complexity Low_complexity 3 150 0 202 74 0 0 chr2 10070621 10070648 -243185935 + (GAAAA)n Simple_repeat Simple_repeat 1 27 0 2085 128 0 3 chr2 10070662 10070968 -243185615 + AluJb SINE Alu 1 305 -7 375 241 147 9 chr2 10070972 10071088 -243185495 + L1ME3A LINE L1 5976 6107 -63 502 83 48 36 chr2 10071094 10071163 -243185420 + LTR5 LTR ERVK 1 73 -896 2096 77 4 4 chr2 10071163 10071437 -243185146 - AluSp SINE Alu -39 274 1 502 83 48 36 chr2 10071437 10071451 -243185132 + LTR5 LTR ERVK 73 85 -884 409 21 0 0 chr2 10071451 10071499 -243185084 + AluSp/q SINE Alu 218 265 -38 600 88 0 0 chr2 10071499 10071579 -243185004 - LTR5 LTR ERVK -889 80 1 561 215 67 0 chr2 10071581 10071730 -243184853 - MER97b DNA MER1_type? -380 673 515 292 268 0 24 chr2 10071896 10071978 -243184605 - MER115 DNA AcHobo -613 80 1 1649 142 49 17 chr2 10072319 10072607 -243183976 - AluJo SINE Alu -9 303 7 193 324 59 0 chr2 10073028 10073096 -243183487 + MIR SINE MIR 81 152 -110 702 248 12 6 chr2 10073259 10073420 -243183163 + MER103 DNA DNA 3 164 -2 224 59 29 0 chr2 10073424 10073458 -243183125 + (TG)n Simple_repeat Simple_repeat 1 35 0 742 74 44 15 chr2 10073475 10073610 -243182973 + GA-rich Low_complexity Low_complexity 2 140 0 473 321 77 6 chr2 10076050 10076218 -243180365 - MIR SINE MIR -48 214 35 925 243 74 42 chr2 10076309 10076646 -243179937 + MLT1A1 LTR MaLR 1 348 -17 427 258 121 0 chr2 10076671 10076795 -243179788 - MIR SINE MIR -102 160 22 2484 51 0 13 chr2 10076964 10077276 -243179307 - AluY SINE Alu -3 308 1 3474 178 22 46 chr2 10077770 10078527 -243178056 + L1MB3 LINE L1 5417 6155 -28 3993 87 20 14 chr2 10080142 10080693 -243175890 + MER41A LTR ERV1 1 554 0 1362 211 111 75 chr2 10082089 10082469 -243174114 + MLT1C LTR MaLR 1 401 -66 1890 98 62 0 chr2 10082469 10082745 -243173838 - AluSx SINE Alu -19 293 1 1362 211 111 75 chr2 10082745 10082815 -243173768 + MLT1C LTR MaLR 401 467 0 520 242 43 12 chr2 10084120 10084281 -243172302 - MLT1F LTR MaLR -7 535 370 1488 154 68 39 chr2 10084444 10084724 -243171859 + AluJo SINE Alu 2 289 -23 2334 70 13 3 chr2 10085184 10085485 -243171098 - AluY SINE Alu -7 304 1 580 293 55 6 chr2 10085953 10086117 -243170466 + MER5B DNA MER1_type 2 173 -5 1790 161 3 3 chr2 10087495 10087787 -243168796 - AluJb SINE Alu -20 292 1 435 276 69 35 chr2 10087945 10088148 -243168435 + MLT1J2 LTR MaLR 240 449 -1 251 253 63 63 chr2 10088152 10088247 -243168336 + MIR SINE MIR 162 256 -6 293 251 30 133 chr2 10088449 10088509 -243168074 - MLT1K LTR MaLR 0 588 523 2136 112 0 28 chr2 10088509 10088831 -243167752 + AluSq SINE Alu 1 313 0 293 251 30 133 chr2 10088831 10088973 -243167610 - MLT1K LTR MaLR -65 523 407 319 322 202 8 chr2 10089479 10089737 -243166846 + L3 LINE CR1 1163 1470 -107 2113 89 0 92 chr2 10090234 10090572 -243166011 + AluSc SINE Alu 3 309 0 378 280 0 0 chr2 10090616 10090748 -243165835 + (TG)n Simple_repeat Simple_repeat 1 132 0 228 257 0 0 chr2 10090751 10090864 -243165719 + (TGAG)n Simple_repeat Simple_repeat 4 116 0 389 222 20 6 chr2 10090897 10091245 -243165338 + (TG)n Simple_repeat Simple_repeat 1 353 0 285 262 30 30 chr2 10091245 10091409 -243165174 + (TGAG)n Simple_repeat Simple_repeat 3 166 0 215 326 116 0 chr2 10092617 10092746 -243163837 + MIR SINE MIR 104 247 -15 391 304 9 7 chr2 10092767 10092894 -243163689 + MIR SINE MIR 16 138 -70 180 295 95 11 chr2 10093228 10093323 -243163260 - MIR SINE MIR -63 145 43 299 313 50 0 chr2 10095876 10095975 -243160608 - MIR3 SINE MIR -42 166 63 1825 162 14 0 chr2 10096162 10096452 -243160131 - AluJb SINE Alu -18 294 1 304 293 41 41 chr2 10099395 10099518 -243157065 + MIR3 SINE MIR 64 186 -22 256 344 0 22 chr2 10100207 10100297 -243156286 + MIR SINE MIR 174 261 -1 189 242 97 0 chr2 10101028 10101090 -243155493 - MIR SINE MIR -87 121 54 394 335 147 12 chr2 10101174 10101617 -243154966 + L2 LINE L2 2551 3053 -260 1870 261 60 7 chr2 10101727 10102262 -243154321 - L1MD1 LINE L1 -86 6262 5709 1280 344 203 19 chr2 10102263 10103773 -243152810 - L2 LINE L2 -605 2709 922 1407 164 23 34 chr2 10103785 10104048 -243152535 + AluJb SINE Alu 15 274 -38 306 263 20 10 chr2 10104073 10104172 -243152411 + L1MEd LINE L1 46 145 -5974 830 296 47 58 chr2 10104392 10105053 -243151530 + L1MEd LINE L1 602 1255 -4864 29 60 0 0 chr2 10105117 10105167 -243151416 + AT_rich Low_complexity Low_complexity 1 50 0 564 42 0 0 chr2 10105175 10105246 -243151337 + (TCTA)n Simple_repeat Simple_repeat 4 74 0 502 256 31 6 chr2 10105397 10105557 -243151026 + L1ME LINE L1 5389 5552 -610 6656 216 31 29 chr2 10105574 10105707 -243150876 - L1MD1 LINE L1 -769 5377 5246 2108 111 3 7 chr2 10105707 10106005 -243150578 + AluSg SINE Alu 14 310 0 6656 216 31 29 chr2 10106005 10107827 -243148756 - L1MD1 LINE L1 -900 5246 3419 352 336 0 0 chr2 10107846 10107977 -243148606 - L2 LINE L2 -2382 932 802 247 390 138 8 chr2 10107986 10108240 -243148343 + L2 LINE L2 2978 3264 -8 551 225 61 56 chr2 10108257 10108470 -243148113 - HAL1 LINE L1 -695 1812 1599 416 326 14 35 chr2 10108476 10108620 -243147963 - HAL1 LINE L1 -977 1530 1390 238 146 0 83 chr2 10108632 10108680 -243147903 - MER5A DNA MER1_type 0 189 146 230 98 0 49 chr2 10108683 10108724 -243147859 - MER5A DNA MER1_type -150 39 1 367 293 65 78 chr2 10108749 10109043 -243147540 - L1MC5 LINE L1 -199 7762 7473 1581 193 16 16 chr2 10109043 10109383 -243147200 - AluJo SINE Alu 0 342 3 797 254 119 28 chr2 10109394 10109831 -243146752 - HAL1 LINE L1 -1253 1254 778 191 146 24 0 chr2 10109831 10109872 -243146711 + (TG)n Simple_repeat Simple_repeat 1 42 0 231 250 36 88 chr2 10109875 10110067 -243146516 - HAL1 LINE L1 -1723 784 603 347 269 82 106 chr2 10110115 10110371 -243146212 - HAL1 LINE L1 -1987 520 271 2309 93 3 3 chr2 10110455 10110768 -243145815 - AluSq SINE Alu 0 313 1 332 225 0 0 chr2 10112001 10112072 -243144511 - MER53 DNA DNA -2 187 117 306 209 77 0 chr2 10112012 10112103 -243144480 + MER53 DNA DNA 24 121 -68 * 342 279 42 21 chr2 10112738 10112892 -243143691 - MIR SINE MIR -63 145 3 261 57 0 0 chr2 10114821 10114856 -243141727 + (CA)n Simple_repeat Simple_repeat 1 35 0 199 195 0 0 chr2 10116211 10116252 -243140331 - L2 LINE L2 0 3313 3273 242 305 34 68 chr2 10116270 10116388 -243140195 + MER81 DNA DNA 1 114 0 2309 105 0 0 chr2 10116491 10116797 -243139786 - AluSx SINE Alu -6 306 1 338 322 57 48 chr2 10117252 10117479 -243139104 - MIR SINE MIR -3 259 31 1451 113 0 0 chr2 10118154 10118358 -243138225 + AluSg/x SINE Alu 107 310 0 2439 149 29 0 chr2 10118650 10119059 -243137524 - MSTC LTR MaLR 0 428 8 2045 142 7 0 chr2 10119153 10119456 -243137127 - AluSx SINE Alu -7 305 1 726 295 101 47 chr2 10119790 10120217 -243136366 - MLT1J2 LTR MaLR 0 450 1 261 344 116 31 chr2 10120430 10120654 -243135929 - L2 LINE L2 -487 2827 2585 3938 45 0 14 chr2 10121017 10121504 -243135079 + L1PA5 LINE L1 5675 6154 0 1473 249 69 39 chr2 10122284 10122774 -243133809 - MLT1D LTR MaLR 0 505 1 201 284 45 0 chr2 10123366 10123433 -243133150 + MIR SINE MIR 78 147 -61 700 185 8 31 chr2 10123887 10124017 -243132566 + AluJo/FLAM SINE Alu 2 128 -174 1566 135 64 70 chr2 10124019 10124331 -243132252 + AluJb SINE Alu 3 312 0 1822 194 62 36 chr2 10126017 10126404 -243130179 + Charlie1b DNA MER1_type 1 405 -2356 2105 138 0 3 chr2 10126404 10126716 -243129867 - AluSq SINE Alu -1 312 2 1822 194 62 36 chr2 10126716 10126832 -243129751 + Charlie1b DNA MER1_type 405 517 -6 427 305 24 42 chr2 10126909 10127076 -243129507 + MIR SINE MIR 29 192 -70 377 258 32 0 chr2 10127650 10127743 -243128840 + MIR3 SINE MIR 61 156 -52 1852 160 7 3 chr2 10128610 10128904 -243127679 + AluJb SINE Alu 1 295 -17 218 267 11 0 chr2 10128990 10129080 -243127503 + (CA)n Simple_repeat Simple_repeat 2 92 0 528 254 0 0 chr2 10129100 10129277 -243127306 + (CA)n Simple_repeat Simple_repeat 1 177 0 1764 207 72 0 chr2 10129845 10130208 -243126375 + MLT1B LTR MaLR 1 389 -1 184 208 42 21 chr2 10130335 10130383 -243126200 + L2 LINE L2 3223 3271 -1 2190 104 0 0 chr2 10130384 10130681 -243125902 - AluSx SINE Alu -13 299 3 1346 268 107 16 chr2 10131115 10131612 -243124971 + MLT1F LTR MaLR 1 542 0 1645 159 10 7 chr2 10131682 10131971 -243124612 - AluJb SINE Alu -16 296 7 2029 67 50 18 chr2 10132179 10132462 -243124121 + AluY SINE Alu 1 292 -19 3849 108 45 69 chr2 10132680 10133214 -243123369 - MER41B LTR ERV1 0 635 118 2188 80 7 0 chr2 10133214 10133503 -243123080 + AluSc SINE Alu 19 309 0 3849 108 45 69 chr2 10133503 10133619 -243122964 - MER41B LTR ERV1 -517 118 1 209 229 83 0 chr2 10134236 10134284 -243122299 - L2 LINE L2 -1 3271 3220 254 373 49 35 chr2 10134773 10135057 -243121526 - L2 LINE L2 -736 2578 2291 233 330 33 0 chr2 10136003 10136094 -243120489 - MLT1J LTR MaLR -92 419 326 334 252 163 0 chr2 10136097 10136220 -243120363 - MLT1J2 LTR MaLR -307 143 1 207 404 60 6 chr2 10136423 10136589 -243119994 - L2 LINE L2 -1855 1459 1285 321 318 79 39 chr2 10136681 10136961 -243119622 - L2 LINE L2 -2361 953 663 589 266 87 0 chr2 10137247 10137431 -243119152 + MIR SINE MIR 14 213 -49 206 83 56 0 chr2 10137819 10137855 -243118728 + T-rich Low_complexity Low_complexity 2 39 0 2223 114 0 0 chr2 10137870 10138168 -243118415 + AluSx SINE Alu 1 298 -14 1901 127 3 24 chr2 10138168 10138459 -243118124 - AluSx SINE Alu -27 285 1 455 48 16 0 chr2 10138465 10138527 -243118056 + (TTTTC)n Simple_repeat Simple_repeat 3 65 0 861 211 6 34 chr2 10138539 10138714 -243117869 - AluJo SINE Alu -141 171 2 225 0 0 0 chr2 10138728 10138753 -243117830 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1777 113 0 4 chr2 10138753 10139000 -243117583 - AluSx SINE Alu -66 246 1 1559 160 82 17 chr2 10141262 10141555 -243115028 + AluJo SINE Alu 1 312 0 182 323 48 0 chr2 10142569 10142631 -243113952 - MIR SINE MIR -63 145 81 205 296 31 41 chr2 10142861 10142988 -243113595 - MIR3 SINE MIR -52 156 68 315 267 75 25 chr2 10144834 10144954 -243111629 - L2 LINE L2 -1 3312 3187 736 220 23 0 chr2 10145060 10145233 -243111350 + MER96B DNA MER1_type? 1 177 -240 1581 161 68 0 chr2 10145632 10145912 -243110671 - AluJb SINE Alu -13 299 1 906 169 9 87 chr2 10145922 10146153 -243110430 - L1MB8 LINE L1 -3 6175 5963 914 270 88 47 chr2 10146376 10146739 -243109844 + MLT1J LTR MaLR 33 410 -101 657 266 8 55 chr2 10146770 10147007 -243109576 - L1ME1 LINE L1 -5 6161 5936 250 290 21 11 chr2 10147012 10147105 -243109478 + MLT1J LTR MaLR 414 507 -4 340 295 90 7 chr2 10147201 10147513 -243109070 - LTR16A LTR ERVL -12 438 45 22 35 0 0 chr2 10148405 10148434 -243108149 + AT_rich Low_complexity Low_complexity 1 29 0 23 0 0 0 chr2 10148492 10148515 -243108068 + AT_rich Low_complexity Low_complexity 1 23 0 394 242 10 39 chr2 10148681 10148784 -243107799 - L1MC4 LINE L1 -1339 6983 1995 387 284 23 0 chr2 10148735 10148823 -243107760 + L1MC4 LINE L1 6614 6703 -1339 * 310 357 0 0 chr2 10148786 10148870 -243107713 - L1MC4 LINE L1 -1342 6700 6617 * 369 318 0 0 chr2 10148836 10148924 -243107659 + L1MC4 LINE L1 6615 6702 -1340 360 322 0 0 chr2 10148872 10148959 -243107624 - L1MC4 LINE L1 -1342 6700 6614 * 266 230 23 0 chr2 10148991 10149078 -243107505 + L1MC4 LINE L1 6614 6702 -1340 306 194 0 0 chr2 10149078 10149140 -243107443 + (CA)n Simple_repeat Simple_repeat 1 62 0 1888 139 7 0 chr2 10149150 10149438 -243107145 - AluSq SINE Alu -23 290 1 669 297 107 30 chr2 10149468 10150035 -243106548 - L1ME3A LINE L1 -247 5923 5308 1509 186 4 0 chr2 10150109 10150372 -243106211 + AluJo SINE Alu 37 300 -12 3900 179 27 27 chr2 10150519 10151704 -243104879 - L1MB7 LINE L1 -54 6130 4928 716 165 0 0 chr2 10151707 10151816 -243104767 + AluSp/q SINE Alu 190 298 -15 995 176 5 10 chr2 10151827 10152020 -243104563 - L1MB7 LINE L1 -1215 4931 4740 1018 157 35 0 chr2 10152087 10152259 -243104324 + MER5A DNA MER1_type 1 178 -11 993 156 85 5 chr2 10152279 10152490 -243104093 + MER33 DNA MER1_type 2 229 -95 3033 136 2 6 chr2 10152965 10153443 -243103140 - MER41B LTR ERV1 0 635 160 1261 91 6 0 chr2 10153605 10153781 -243102802 - MER41B LTR ERV1 -458 177 1 1897 121 0 11 chr2 10154282 10154562 -243102021 - AluJb SINE Alu -17 295 19 240 35 0 0 chr2 10154566 10154595 -243101988 + (T)n Simple_repeat Simple_repeat 1 29 0 180 300 60 30 chr2 10154607 10154707 -243101876 - MIR SINE MIR -64 198 96 1247 211 67 58 chr2 10155012 10155358 -243101225 - MLT1A2 LTR MaLR 0 374 26 208 351 75 11 chr2 10156048 10156142 -243100441 + MIR SINE MIR 47 146 -62 2851 184 13 0 chr2 10156198 10156753 -243099830 + L1MB3 LINE L1 4596 5157 -989 2037 98 0 0 chr2 10156780 10157107 -243099476 + AluSx SINE Alu 6 332 0 2408 149 16 24 chr2 10157107 10157560 -243099023 + L1MB3 LINE L1 5495 6172 -11 919 144 17 22 chr2 10157560 10157732 -243098851 + L1MB3 LINE L1 6005 6183 0 2408 149 16 24 chr2 10157732 10157744 -243098839 + L1MB3 LINE L1 6172 6183 0 1826 194 121 16 chr2 10157834 10158257 -243098326 + MLT1C LTR MaLR 1 467 0 501 291 22 6 chr2 10158811 10158993 -243097590 + MLT1J2 LTR MaLR 1 185 -265 26 64 0 0 chr2 10159946 10159993 -243096590 + GC_rich Low_complexity Low_complexity 1 47 0 22 35 0 0 chr2 10160193 10160222 -243096361 + GC_rich Low_complexity Low_complexity 1 29 0 245 197 0 42 chr2 10160234 10160305 -243096278 + C-rich Low_complexity Low_complexity 6 73 0 23 0 0 0 chr2 10160329 10160352 -243096231 + GC_rich Low_complexity Low_complexity 1 23 0 22 70 0 0 chr2 10160513 10160556 -243096027 + GC_rich Low_complexity Low_complexity 1 43 0 198 304 14 0 chr2 10161216 10161285 -243095298 + MIR SINE MIR 77 146 -62 22 0 0 0 chr2 10162645 10162667 -243093916 + AT_rich Low_complexity Low_complexity 1 22 0 633 259 68 18 chr2 10165689 10165909 -243090674 - L1MB7 LINE L1 -18 6166 5936 231 61 0 0 chr2 10166301 10166334 -243090249 + (CAAAA)n Simple_repeat Simple_repeat 2 34 0 577 219 42 8 chr2 10166346 10166465 -243090118 + FLAM_A SINE Alu 1 123 -10 1860 164 3 0 chr2 10166466 10166753 -243089830 - AluJo SINE Alu -19 293 6 195 267 65 40 chr2 10166763 10166882 -243089701 - MIR SINE MIR -67 141 23 811 188 2 14 chr2 10169180 10169703 -243086880 + (CAT)n Simple_repeat Simple_repeat 1 516 0 873 148 11 6 chr2 10169723 10169899 -243086684 + (CAT)n Simple_repeat Simple_repeat 1 177 0 835 169 0 22 chr2 10169875 10170059 -243086524 + (CACCAT)n Simple_repeat Simple_repeat 1 180 0 * 219 261 0 0 chr2 10170086 10170155 -243086428 + (CCA)n Simple_repeat Simple_repeat 1 69 0 815 200 0 6 chr2 10170175 10170355 -243086228 + (CAT)n Simple_repeat Simple_repeat 1 179 0 262 326 22 11 chr2 10171081 10171170 -243085413 + MIR3 SINE MIR 103 192 -16 2253 88 0 10 chr2 10171275 10171580 -243085003 + AluSg SINE Alu 1 302 -8 2471 40 0 7 chr2 10172434 10172734 -243083849 + AluY SINE Alu 1 298 -13 403 255 103 14 chr2 10172782 10172927 -243083656 + L1ME4a LINE L1 5964 6121 0 2077 108 0 0 chr2 10173155 10173443 -243083140 + AluSx SINE Alu 7 294 -18 2049 137 0 0 chr2 10174842 10175142 -243081441 - AluSx SINE Alu -12 300 1 290 315 36 36 chr2 10175142 10175243 -243081340 - L2 LINE L2 -15 3298 3195 279 0 0 0 chr2 10176995 10177026 -243079557 + (GGGTG)n Simple_repeat Simple_repeat 4 34 0 264 59 0 0 chr2 10177156 10177190 -243079393 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 2182 101 156 6 chr2 10177677 10178042 -243078541 + MSTA LTR MaLR 2 421 -7 264 59 0 0 chr2 10178161 10178195 -243078388 + (TTCA)n Simple_repeat Simple_repeat 1 34 0 252 291 95 76 chr2 10178198 10178408 -243078175 - L2 LINE L2 -27 3286 3073 2798 125 26 0 chr2 10178410 10178827 -243077756 - MSTA LTR MaLR 0 428 1 2693 172 13 37 chr2 10178877 10179418 -243077165 - L1MB7 LINE L1 -14 6170 5643 1596 208 0 0 chr2 10179435 10179747 -243076836 - AluJo SINE Alu 0 312 1 450 273 43 14 chr2 10179748 10179887 -243076696 - L2 LINE L2 -241 3072 2930 693 264 159 85 chr2 10179982 10180335 -243076248 + MLT1J LTR MaLR 234 508 -3 434 230 8 71 chr2 10181147 10181273 -243075310 - L2 LINE L2 0 3313 3196 233 264 72 56 chr2 10181802 10181927 -243074656 + MIR SINE MIR 32 158 -104 2240 90 3 34 chr2 10182235 10182557 -243074026 - AluSx SINE Alu 0 312 1 531 140 0 140 chr2 10182566 10182702 -243073881 - FRAM SINE Alu -8 168 52 238 317 146 8 chr2 10182763 10182886 -243073697 - MIR SINE MIR -66 196 57 388 311 78 36 chr2 10184831 10185024 -243071559 + MIR SINE MIR 50 250 -12 451 288 0 8 chr2 10185611 10185729 -243070854 - MIR SINE MIR -63 145 29 213 208 75 0 chr2 10185719 10185772 -243070811 + L2 LINE L2 3206 3262 -10 * 1722 183 38 2 chr2 10185776 10186228 -243070355 + MLT2B1 LTR ERVL 1 519 -1 776 163 7 15 chr2 10186410 10186545 -243070038 - FLAM_C SINE Alu -1 142 9 1342 246 82 19 chr2 10186627 10187090 -243069493 + MLT1D LTR MaLR 1 492 -13 1570 196 48 16 chr2 10187837 10188210 -243068373 - MLT1B LTR MaLR 0 390 6 949 253 145 15 chr2 10189994 10190394 -243066189 - MER31B LTR ERV1 -5 461 10 1421 194 16 44 chr2 10191628 10191735 -243064848 + AluJo SINE Alu 3 111 -201 189 0 0 0 chr2 10191735 10191756 -243064827 + (TTTTG)n Simple_repeat Simple_repeat 2 22 0 1421 194 16 44 chr2 10191756 10191967 -243064616 + AluJo SINE Alu 111 312 0 373 224 94 151 chr2 10191972 10192120 -243064463 - L1ME2 LINE L1 -240 5924 5794 1835 134 29 0 chr2 10192120 10192397 -243064186 - AluJb SINE Alu -22 290 6 373 224 94 151 chr2 10192397 10192493 -243064090 - L1ME2 LINE L1 -370 5794 5694 1454 194 168 60 chr2 10192509 10193024 -243063559 + MLT1F1 LTR MaLR 1 566 -1 556 309 45 56 chr2 10193040 10193377 -243063206 - L1P5 LINE L1 -498 5658 5326 261 263 15 36 chr2 10193634 10193771 -243062812 - L1ME2 LINE L1 -770 5376 5243 229 313 199 0 chr2 10193774 10193940 -243062643 - L1ME LINE L1 -218 5903 5705 1015 257 34 81 chr2 10193940 10194163 -243062420 - MLT1I LTR MaLR 0 409 210 1668 176 0 26 chr2 10194163 10194476 -243062107 - AluJo SINE Alu -6 306 2 1015 257 34 81 chr2 10194476 10194637 -243061946 - MLT1I LTR MaLR -199 210 43 290 305 81 26 chr2 10194963 10195133 -243061450 - MIR SINE MIR -71 137 5 1094 203 17 17 chr2 10195506 10195743 -243060840 + L1MB7 LINE L1 5894 6130 -54 351 294 59 10 chr2 10195822 10195924 -243060659 + MIR SINE MIR 75 181 -81 378 263 0 10 chr2 10196307 10196406 -243060177 - MIR SINE MIR 0 262 165 236 219 16 16 chr2 10196517 10196581 -243060002 + L1MC5 LINE L1 7844 7907 -54 1125 115 0 0 chr2 10196587 10196744 -243059839 - AluSg/x SINE Alu -22 288 132 1464 103 58 137 chr2 10196744 10197073 -243059510 - AluYb8 SINE Alu -15 303 1 347 165 139 0 chr2 10197108 10197194 -243059389 - MIR SINE MIR -84 178 78 271 316 41 10 chr2 10197615 10197713 -243058870 + MIR SINE MIR 66 166 -96 282 316 53 0 chr2 10197990 10198104 -243058479 - MIR SINE MIR -130 132 13 1720 144 36 4 chr2 10198622 10198899 -243057684 + AluJb SINE Alu 21 306 -6 1301 172 24 58 chr2 10199300 10199616 -243056967 + AluJo SINE Alu 1 306 0 248 244 51 0 chr2 10200006 10200084 -243056499 - L2 LINE L2 -329 2984 2903 404 169 12 36 chr2 10202117 10202283 -243054300 + (TCTCTG)n Simple_repeat Simple_repeat 6 167 0 420 228 0 0 chr2 10202322 10202493 -243054090 + CT-rich Low_complexity Low_complexity 2 172 0 390 162 34 34 chr2 10202466 10202645 -243053938 + (TCTCTG)n Simple_repeat Simple_repeat 2 180 0 * 406 239 115 8 chr2 10202721 10202851 -243053732 + MIR SINE MIR 62 205 -57 1901 146 14 0 chr2 10202889 10203177 -243053406 - AluJo SINE Alu -16 296 5 257 200 115 62 chr2 10203212 10203342 -243053241 - L1ME4a LINE L1 -3 6118 5982 209 129 0 48 chr2 10203423 10203485 -243053098 + (TG)n Simple_repeat Simple_repeat 1 59 0 2236 104 3 0 chr2 10205594 10205901 -243050682 + AluSx SINE Alu 3 310 -2 1732 166 0 48 chr2 10205906 10206219 -243050364 + AluJo SINE Alu 1 298 -14 2469 59 13 0 chr2 10206851 10207157 -243049426 + AluY SINE Alu 2 311 0 1739 132 75 4 chr2 10207744 10208024 -243048559 - AluJo SINE Alu -12 300 1 4039 155 46 9 chr2 10208024 10208900 -243047683 + L1MB8 LINE L1 5152 6058 -120 1880 162 0 3 chr2 10208900 10209209 -243047374 + AluJo SINE Alu 1 308 -4 1991 113 14 0 chr2 10209321 10209604 -243046979 - AluSx SINE Alu -2 310 24 278 333 0 11 chr2 10210530 10210617 -243045966 + MIR SINE MIR 60 145 -63 1766 135 26 26 chr2 10210982 10211286 -243045297 - AluJb SINE Alu -8 304 1 329 179 51 26 chr2 10211288 10211366 -243045217 + MER58 DNA MER1_type 174 253 -88 327 255 103 49 chr2 10211480 10211684 -243044899 - L3 LINE CR1 -102 1475 1261 239 394 92 4 chr2 10212337 10212588 -243043995 - L2 LINE L2 -8 3264 2992 2795 6 0 0 chr2 10212594 10212905 -243043678 + AluYa5 SINE Alu 1 311 0 294 268 89 73 chr2 10213520 10213643 -243042940 - MIR SINE MIR -65 197 73 287 295 181 7 chr2 10213905 10214054 -243042529 - MIR SINE MIR -59 203 29 1363 135 5 0 chr2 10214342 10214549 -243042034 + AluJo SINE Alu 87 294 -18 291 235 4 12 chr2 10215685 10215767 -243040816 - FLAM_A SINE Alu -6 127 73 3450 141 55 110 chr2 10215771 10216601 -243039982 + LTR1 LTR ERV1 1 785 0 1868 113 31 14 chr2 10217840 10218131 -243038452 - AluSx SINE Alu -16 296 1 198 0 0 0 chr2 10218685 10218707 -243037876 + (GA)n Simple_repeat Simple_repeat 2 23 0 1859 139 32 0 chr2 10219141 10219422 -243037161 - AluSq SINE Alu -13 300 11 597 200 42 28 chr2 10219435 10219619 -243036964 - MIR SINE MIR -65 197 10 241 254 0 0 chr2 10220331 10220386 -243036197 - MIR SINE MIR -76 132 78 888 203 0 0 chr2 10220409 10220567 -243036016 + AluJb SINE Alu 147 304 -8 491 252 27 27 chr2 10221014 10221161 -243035422 + MER5A DNA MER1_type 38 184 -5 265 279 31 4 chr2 10221172 10221278 -243035305 + MIR SINE MIR 35 143 -65 1936 141 3 3 chr2 10222011 10222309 -243034274 - AluJb SINE Alu -14 298 1 2236 89 3 6 chr2 10223647 10223960 -243032623 - AluSx SINE Alu 0 312 1 1346 143 48 0 chr2 10224703 10224939 -243031644 - AluJo SINE Alu 0 310 65 330 268 0 0 chr2 10225305 10225428 -243031155 + (TG)n Simple_repeat Simple_repeat 2 124 0 526 268 6 3 chr2 10225501 10225815 -243030768 + (TG)n Simple_repeat Simple_repeat 1 315 0 259 258 206 0 chr2 10228228 10228325 -243028258 + MIR SINE MIR 33 149 -59 338 331 51 34 chr2 10229779 10229957 -243026626 - L2 LINE L2 -18 3254 3074 321 304 98 79 chr2 10232491 10232705 -243023878 - L1ME4a LINE L1 -30 6091 5874 558 335 66 12 chr2 10232983 10233225 -243023358 + MIR SINE MIR 2 256 -6 2169 145 124 0 chr2 10233318 10233697 -243022886 + MSTB LTR MaLR 1 426 0 364 188 124 0 chr2 10233742 10233859 -243022724 + L1ME1 LINE L1 6053 6184 0 2055 126 14 3 chr2 10233868 10234161 -243022422 - AluSx SINE Alu -16 296 1 309 249 29 58 chr2 10234261 10234479 -243022104 + (TATTG)n Simple_repeat Simple_repeat 1 211 0 225 0 0 0 chr2 10235648 10235673 -243020910 + (T)n Simple_repeat Simple_repeat 1 25 0 1007 275 41 9 chr2 10235816 10236158 -243020425 - MLT1A2 LTR MaLR -17 357 5 278 261 169 32 chr2 10236219 10236468 -243020115 - L1ME4a LINE L1 -8 6113 5831 1015 96 0 7 chr2 10236470 10236606 -243019977 + AluSq/x SINE Alu 1 135 -177 297 369 167 30 chr2 10236919 10237255 -243019328 + L3 LINE CR1 493 874 -703 688 288 73 67 chr2 10238053 10238369 -243018214 + L2 LINE L2 2954 3271 -1 4939 152 63 30 chr2 10239129 10240023 -243016560 + L1MC1 LINE L1 5411 6333 0 1806 142 4 0 chr2 10240515 10240790 -243015793 + AluJo SINE Alu 1 276 -36 2030 126 0 0 chr2 10240797 10241083 -243015500 - AluSx SINE Alu -22 290 5 210 71 0 0 chr2 10241102 10241130 -243015453 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 1009 164 36 76 chr2 10241170 10241395 -243015188 - MER20 DNA MER1_type -2 217 2 219 36 0 0 chr2 10241441 10241469 -243015114 + (CA)n Simple_repeat Simple_repeat 2 29 0 278 290 238 28 chr2 10241896 10242182 -243014401 - L2 LINE L2 -30 3242 2897 2084 80 76 0 chr2 10242264 10242539 -243014044 + AluSc SINE Alu 1 296 -13 186 271 212 42 chr2 10242741 10242859 -243013724 + MER5A DNA MER1_type 17 154 -35 246 289 106 0 chr2 10245193 10245297 -243011286 + MIR3 SINE MIR 47 161 -47 204 40 0 0 chr2 10245301 10245326 -243011257 + (TTTTC)n Simple_repeat Simple_repeat 5 29 0 1001 220 119 42 chr2 10246245 10246424 -243010159 + MLT1A2 LTR MaLR 1 165 -209 3231 150 10 2 chr2 10246424 10246903 -243009680 + MER66B LTR ERV1 1 483 -3 1001 220 119 42 chr2 10246903 10247059 -243009524 + MLT1A2 LTR MaLR 165 362 -12 744 298 59 12 chr2 10247064 10247403 -243009180 - L1ME3A LINE L1 -258 5912 5558 1071 186 70 64 chr2 10248848 10249176 -243007407 - L1MB7 LINE L1 0 6184 5855 2091 98 0 7 chr2 10249186 10249472 -243007111 - AluSg1 SINE Alu -25 284 1 1730 168 7 0 chr2 10249473 10249765 -243006818 - AluJo SINE Alu -18 294 1 494 238 79 0 chr2 10249765 10249929 -243006654 - L1M4 LINE L1 -2561 3585 3409 798 258 58 48 chr2 10249967 10250232 -243006351 - MIR SINE MIR 0 262 1 246 269 156 50 chr2 10250821 10250962 -243005621 - MIR3 SINE MIR -19 189 34 1749 189 0 0 chr2 10251259 10251566 -243005017 + AluJo SINE Alu 3 309 -3 1035 234 58 23 chr2 10251926 10252216 -243004367 + L1MC1 LINE L1 6013 6316 -17 1840 171 7 3 chr2 10252216 10252521 -243004062 - AluJb SINE Alu -6 306 1 1035 234 58 23 chr2 10252521 10252538 -243004045 + L1MC1 LINE L1 6316 6331 -2 414 0 0 0 chr2 10252538 10252584 -243003999 + (CA)n Simple_repeat Simple_repeat 2 47 0 322 193 174 28 chr2 10252780 10252889 -243003694 - L2 LINE L2 -3 3269 3145 562 266 23 60 chr2 10253107 10253325 -243003258 + MIR SINE MIR 21 226 -36 1431 84 0 0 chr2 10256633 10257031 -242999552 + (CCA)n Simple_repeat Simple_repeat 1 398 0 458 327 199 6 chr2 10257288 10257649 -242998934 - L2 LINE L2 -20 3293 2863 306 148 0 0 chr2 10258168 10258222 -242998361 + (CA)n Simple_repeat Simple_repeat 1 54 0 215 234 0 0 chr2 10259069 10259116 -242997467 - L2 LINE L2 -10 3262 3216 2294 81 10 0 chr2 10259316 10259624 -242996959 - AluSx SINE Alu -1 311 1 244 369 117 0 chr2 10259669 10259780 -242996803 + L2 LINE L2 3139 3262 -10 26 30 0 0 chr2 10260665 10260698 -242995885 + AT_rich Low_complexity Low_complexity 1 33 0 193 340 19 19 chr2 10260718 10260824 -242995759 - MIR3 SINE MIR -21 187 82 450 0 0 0 chr2 10260879 10260929 -242995654 + (TG)n Simple_repeat Simple_repeat 1 50 0 2043 108 4 0 chr2 10260929 10261207 -242995376 - AluSx SINE Alu -33 279 1 382 263 78 62 chr2 10262469 10262648 -242993935 - MIR SINE MIR -56 206 25 237 191 0 48 chr2 10264813 10264876 -242991707 - L2 LINE L2 -12 3260 3201 568 284 214 23 chr2 10264880 10265222 -242991361 - L2 LINE L2 -3 3310 2904 262 360 80 28 chr2 10265248 10265498 -242991085 - L2 LINE L2 -96 3176 2914 1236 199 40 46 chr2 10266316 10266642 -242989941 - MER33 DNA MER1_type 0 324 1 2085 115 10 10 chr2 10267202 10267514 -242989069 - AluSx SINE Alu 0 312 1 279 190 0 0 chr2 10267828 10267886 -242988697 + T-rich Low_complexity Low_complexity 1 58 0 389 310 155 34 chr2 10269189 10269428 -242987155 - HAL1 LINE L1 -1837 670 403 799 288 35 63 chr2 10269450 10269625 -242986958 - MLT1J2 LTR MaLR -2 448 270 764 262 15 34 chr2 10269625 10269831 -242986752 + MER105 DNA DNA 1 202 -2 799 288 35 63 chr2 10269831 10270082 -242986501 - MLT1J2 LTR MaLR -180 270 34 186 276 40 40 chr2 10270121 10270197 -242986386 + L2 LINE L2 204 279 -3035 198 262 0 0 chr2 10271453 10271495 -242985088 + MIR SINE MIR 35 76 -186 1785 163 15 66 chr2 10271709 10272102 -242984481 - MLT1B LTR MaLR -17 373 1 329 150 175 0 chr2 10273612 10273692 -242982891 - MLT1C LTR MaLR -369 98 5 567 140 20 20 chr2 10273950 10274050 -242982533 + FLAM_C SINE Alu 34 133 -10 2275 106 0 0 chr2 10274505 10274808 -242981775 + AluSq SINE Alu 1 303 -10 262 296 28 0 chr2 10274909 10275017 -242981566 - L1MC4a LINE L1 -1869 5939 5829 314 290 76 0 chr2 10275031 10275162 -242981421 - L1MC4a LINE L1 -2084 5724 5584 1616 186 21 0 chr2 10275196 10275481 -242981102 + AluJo SINE Alu 13 303 -9 1784 131 42 48 chr2 10275559 10275683 -242980900 + AluSx SINE Alu 1 124 -188 228 35 0 0 chr2 10275683 10275712 -242980871 + (TAAA)n Simple_repeat Simple_repeat 2 30 0 1784 131 42 48 chr2 10275712 10275899 -242980684 + AluSx SINE Alu 124 310 -2 2237 112 0 3 chr2 10276352 10276666 -242979917 + AluSq SINE Alu 1 313 0 1419 171 91 25 chr2 10277634 10277920 -242978663 - AluSq SINE Alu -8 305 1 245 328 172 0 chr2 10278039 10278173 -242978410 - MIR SINE MIR -2 260 104 2033 129 10 0 chr2 10278188 10278482 -242978101 - AluSx SINE Alu -15 297 1 1881 161 3 0 chr2 10278856 10279155 -242977428 + AluJo SINE Alu 13 312 0 384 329 97 35 chr2 10280008 10280236 -242976347 - L1ME3 LINE L1 -1 6161 5920 241 298 53 10 chr2 10280674 10280793 -242975790 + MIR SINE MIR 38 159 -66 2474 53 0 3 chr2 10281235 10281535 -242975048 + AluY SINE Alu 1 299 -12 199 267 218 10 chr2 10281835 10281936 -242974647 + MIR SINE MIR 141 262 0 236 341 34 0 chr2 10283000 10283088 -242973495 - MIR SINE MIR -78 184 94 747 186 0 0 chr2 10285553 10285682 -242970901 - FLAM_A SINE Alu 0 133 5 247 214 36 0 chr2 10286592 10286648 -242969935 - MLT2A2 LTR ERVL -3 450 393 801 196 0 0 chr2 10286649 10286916 -242969667 + (TGGA)n Simple_repeat Simple_repeat 1 267 0 975 147 0 0 chr2 10286935 10287112 -242969471 + (TGGA)n Simple_repeat Simple_repeat 3 179 0 825 176 0 0 chr2 10287128 10287304 -242969279 + (TGGA)n Simple_repeat Simple_repeat 4 179 0 1195 206 142 55 chr2 10287312 10287748 -242968835 - MLT2B1 LTR ERVL -46 474 1 2263 89 13 0 chr2 10288047 10288349 -242968234 + AluY SINE Alu 1 306 -5 181 185 222 0 chr2 10288467 10288521 -242968062 - L3 LINE CR1 -408 1169 1104 275 309 37 0 chr2 10288847 10288928 -242967655 - L3 LINE CR1 -533 1044 961 499 299 86 8 chr2 10288966 10289204 -242967379 - MIR SINE MIR 0 262 15 187 93 47 0 chr2 10290594 10290637 -242965946 + (TG)n Simple_repeat Simple_repeat 1 45 0 310 162 54 24 chr2 10290656 10290956 -242965627 + (TG)n Simple_repeat Simple_repeat 1 309 0 330 118 45 56 chr2 10290990 10291168 -242965415 + (TG)n Simple_repeat Simple_repeat 1 176 0 200 220 50 10 chr2 10291842 10291942 -242964641 + (TG)n Simple_repeat Simple_repeat 1 104 0 439 257 37 0 chr2 10292757 10292866 -242963717 - MER53 DNA DNA 0 189 77 303 224 103 9 chr2 10293663 10293779 -242962804 + MIR3 SINE MIR 15 141 -67 238 289 192 19 chr2 10294886 10295386 -242961197 - L1MC4a LINE L1 -1838 5970 5325 1956 126 14 7 chr2 10295386 10295679 -242960904 + AluSx SINE Alu 1 295 -17 238 289 192 19 chr2 10295679 10295767 -242960816 - L1MC4a LINE L1 -2483 5325 5254 312 296 112 8 chr2 10295803 10295928 -242960655 - L1MC4a LINE L1 -1085 5061 4924 207 250 0 94 chr2 10295929 10296025 -242960558 + MER5A DNA MER1_type 85 171 -18 230 250 100 12 chr2 10295942 10296022 -242960561 - MER5B DNA MER1_type -70 108 22 1694 167 31 0 chr2 10298384 10298671 -242957912 - AluJb SINE Alu -16 296 1 1998 108 7 7 chr2 10300135 10300423 -242956160 - AluJb SINE Alu -12 300 13 2056 98 0 0 chr2 10303062 10303336 -242953247 - AluSx SINE Alu -15 297 24 2264 75 3 23 chr2 10303556 10303863 -242952720 - AluSp SINE Alu -12 301 1 21 82 0 0 chr2 10304404 10304453 -242952130 + AT_rich Low_complexity Low_complexity 1 49 0 27 49 0 0 chr2 10305464 10305505 -242951078 + GC_rich Low_complexity Low_complexity 1 41 0 21 0 0 0 chr2 10305624 10305645 -242950938 + GC_rich Low_complexity Low_complexity 1 21 0 27 0 0 0 chr2 10305708 10305735 -242950848 + GC_rich Low_complexity Low_complexity 1 27 0 26 93 0 0 chr2 10305848 10305923 -242950660 + GC_rich Low_complexity Low_complexity 1 75 0 278 128 26 26 chr2 10305979 10306057 -242950526 + (CCCCG)n Simple_repeat Simple_repeat 4 81 0 22 0 0 0 chr2 10306106 10306128 -242950455 + GC_rich Low_complexity Low_complexity 1 22 0 352 244 12 0 chr2 10307004 10307086 -242949497 + MIR SINE MIR 42 124 -84 189 121 0 0 chr2 10307197 10307230 -242949353 + (TGAA)n Simple_repeat Simple_repeat 3 35 0 2137 116 13 0 chr2 10308259 10308560 -242948023 - AluSx SINE Alu -7 305 1 344 328 37 8 chr2 10308715 10308849 -242947734 + MIR3 SINE MIR 65 202 -6 186 43 0 0 chr2 10309005 10309028 -242947555 + (TTA)n Simple_repeat Simple_repeat 2 24 0 1987 112 0 0 chr2 10309036 10309312 -242947271 - AluSx SINE Alu -36 276 1 729 322 25 12 chr2 10309616 10309939 -242946644 + MARNA DNA Mariner 231 557 -29 2087 116 0 13 chr2 10310118 10310421 -242946162 - AluSx SINE Alu -13 299 1 237 262 68 19 chr2 10311647 10311750 -242944833 - L2 LINE L2 -25 3247 3140 183 100 0 0 chr2 10312396 10312426 -242944157 + (GGGAGA)n Simple_repeat Simple_repeat 3 32 0 480 301 75 0 chr2 10312716 10312902 -242943681 - MLT1L LTR MaLR -52 563 364 626 182 115 24 chr2 10313119 10313284 -242943299 + MLT1C LTR MaLR 1 180 -210 1350 161 4 37 chr2 10313284 10313527 -242943056 + AluJo SINE Alu 1 235 -77 1112 217 64 4 chr2 10313548 10313797 -242942786 + MLT1C LTR MaLR 199 462 -5 400 195 164 23 chr2 10314023 10314151 -242942432 + MLT1G LTR MaLR 443 588 -2 451 278 198 0 chr2 10314266 10314428 -242942155 + MIR SINE MIR 17 210 -52 2220 223 63 92 chr2 10314439 10314496 -242942087 - MER97a DNA MER1_type? -11 883 826 3157 75 36 32 chr2 10314496 10314938 -242941645 - MLT2A1 LTR ERVL 0 444 1 2220 223 63 92 chr2 10314938 10315787 -242940796 - MER97a DNA MER1_type? -68 826 3 2248 79 3 7 chr2 10316119 10316422 -242940161 + AluY SINE Alu 1 302 -9 2011 134 7 0 chr2 10317289 10317588 -242938995 - AluSx SINE Alu -9 303 3 181 244 44 0 chr2 10317645 10317690 -242938893 - L2 LINE L2 -1 3312 3266 850 227 0 45 chr2 10318803 10318921 -242937662 + MER3 DNA MER1_type 21 128 -81 2280 99 3 0 chr2 10318921 10319225 -242937358 - AluSq SINE Alu -8 305 1 850 227 0 45 chr2 10319225 10319304 -242937279 + MER3 DNA MER1_type 128 209 0 480 286 16 49 chr2 10320048 10320233 -242936350 + MIR3 SINE MIR 15 193 -15 567 265 46 7 chr2 10320450 10320601 -242935982 + MIR SINE MIR 20 176 -86 1030 113 0 0 chr2 10320669 10320810 -242935773 + AluJb SINE Alu 1 141 -171 189 0 0 0 chr2 10320828 10320849 -242935734 + (TAAA)n Simple_repeat Simple_repeat 2 22 0 1560 139 44 26 chr2 10320867 10321140 -242935443 + AluJo SINE Alu 5 282 -30 459 78 0 0 chr2 10321234 10321298 -242935285 + (TCCC)n Simple_repeat Simple_repeat 4 67 0 949 134 92 46 chr2 10321397 10321614 -242934969 - L1MC2 LINE L1 -9 6335 6109 1400 149 0 69 chr2 10321625 10321901 -242934682 - AluJb SINE Alu -6 306 50 398 293 38 25 chr2 10322126 10322283 -242934300 + MER5B DNA MER1_type 11 169 -9 2021 121 17 0 chr2 10322384 10322682 -242933901 - AluSx SINE Alu -8 304 2 2507 50 0 0 chr2 10322692 10322989 -242933594 - AluY SINE Alu -14 297 1 1788 155 20 0 chr2 10323603 10323900 -242932683 + AluJo SINE Alu 1 303 -9 714 118 0 152 chr2 10325156 10325189 -242931394 - L1MB5 LINE L1 -10 6164 6128 225 0 0 0 chr2 10325189 10325214 -242931369 + (TTTA)n Simple_repeat Simple_repeat 2 26 0 1975 127 0 0 chr2 10325214 10325497 -242931086 - AluSx SINE Alu -29 283 1 714 118 0 152 chr2 10325497 10325526 -242931057 - L1MB5 LINE L1 -45 6129 6097 2202 74 3 0 chr2 10325526 10325832 -242930751 + AluSp SINE Alu 1 307 0 714 118 0 152 chr2 10325832 10325943 -242930640 - L1MB5 LINE L1 -77 6097 6014 1810 149 3 14 chr2 10325991 10326286 -242930297 - AluJo SINE Alu -20 292 1 504 229 186 32 chr2 10327920 10328108 -242928475 - MIR SINE MIR -17 245 29 483 263 94 52 chr2 10328450 10328663 -242927920 + MIR SINE MIR 20 241 -21 653 244 34 11 chr2 10328955 10329131 -242927452 + MIR SINE MIR 36 215 -47 23 54 0 0 chr2 10329290 10329327 -242927256 + AT_rich Low_complexity Low_complexity 1 37 0 218 316 25 0 chr2 10329402 10329481 -242927102 - MIR SINE MIR -29 233 153 1781 161 3 7 chr2 10330157 10330462 -242926121 - AluJb SINE Alu -8 304 1 183 303 252 0 chr2 10330846 10330965 -242925618 + MIR SINE MIR 51 199 -63 2578 40 0 0 chr2 10331305 10331607 -242924976 - AluY SINE Alu -9 302 1 756 103 154 0 chr2 10331908 10332025 -242924558 - AluJb SINE Alu -176 136 2 193 329 0 0 chr2 10332602 10332672 -242923911 - MIR SINE MIR -116 146 77 517 127 59 3 chr2 10334089 10334309 -242922274 + AluSx SINE Alu 1 306 -4 608 246 24 12 chr2 10334467 10334634 -242921949 + MER20 DNA MER1_type 36 204 -15 261 98 0 0 chr2 10334705 10334746 -242921837 + (TTCA)n Simple_repeat Simple_repeat 4 44 0 245 300 71 41 chr2 10334800 10334970 -242921613 - L2 LINE L2 -101 3171 2997 254 300 25 0 chr2 10335983 10336063 -242920520 + L2 LINE L2 2997 3078 -194 330 298 141 16 chr2 10337233 10337424 -242919159 - MIR SINE MIR 0 262 48 1058 189 0 0 chr2 10337495 10337659 -242918924 - AluJo SINE Alu -14 298 135 318 50 0 0 chr2 10337660 10337700 -242918883 + (TTTTC)n Simple_repeat Simple_repeat 1 40 0 374 183 0 12 chr2 10337711 10337793 -242918790 + CT-rich Low_complexity Low_complexity 2 82 0 366 357 138 19 chr2 10337793 10338216 -242918367 - HAL1 LINE L1 -1206 1301 881 637 197 7 7 chr2 10338217 10338369 -242918214 + CT-rich Low_complexity Low_complexity 1 152 0 333 177 76 13 chr2 10338369 10338448 -242918135 - AluJo SINE Alu -169 133 50 187 98 0 49 chr2 10338459 10338500 -242918083 + (TTTC)n Simple_repeat Simple_repeat 2 40 0 530 228 49 0 chr2 10338502 10338625 -242917958 - AluJo SINE Alu -173 129 1 421 304 30 0 chr2 10339021 10339156 -242917427 + MLT1H LTR MaLR 406 544 -5 2987 241 70 14 chr2 10339602 10340361 -242916222 - MER21B LTR ERV1 -44 819 19 267 238 60 12 chr2 10340359 10340443 -242916140 - MER21B LTR ERV1 -757 106 19 * 373 186 10 98 chr2 10340442 10340544 -242916039 - MER21B LTR ERV1 -758 105 13 448 297 145 56 chr2 10340964 10341483 -242915100 - L1ME4a LINE L1 -104 6017 5401 2320 122 0 0 chr2 10341483 10341795 -242914788 + AluSx SINE Alu 1 312 0 448 297 145 56 chr2 10341795 10341958 -242914625 - L1ME4a LINE L1 -720 5401 5254 390 314 66 39 chr2 10342258 10342516 -242914067 - L1ME4a LINE L1 -1276 4870 4606 694 167 0 9 chr2 10342527 10342641 -242913942 + FLAM_C SINE Alu 14 126 -17 43 20 0 0 chr2 10342652 10342702 -242913881 + AT_rich Low_complexity Low_complexity 1 50 0 494 297 100 46 chr2 10342702 10343373 -242913210 - L1ME4a LINE L1 -1526 4620 3914 315 0 0 0 chr2 10343386 10343421 -242913162 + (TG)n Simple_repeat Simple_repeat 1 35 0 308 209 185 61 chr2 10343591 10343888 -242912695 + L1ME4a LINE L1 5788 6121 0 377 294 14 25 chr2 10344185 10344359 -242912224 + MIR SINE MIR 17 188 -60 917 263 58 11 chr2 10346028 10346393 -242910190 - HAL1 LINE L1 -1126 1381 1000 247 279 93 66 chr2 10346497 10346628 -242909955 - HAL1 LINE L1 -1651 856 717 2726 36 0 7 chr2 10346628 10346935 -242909648 - AluY SINE Alu -6 305 1 247 279 93 66 chr2 10346935 10346986 -242909597 - HAL1 LINE L1 -1790 717 669 2214 128 0 6 chr2 10347933 10348246 -242908337 - AluSx SINE Alu -1 311 1 273 324 46 17 chr2 10348591 10348764 -242907819 + L3 LINE CR1 1056 1233 -344 2741 205 13 8 chr2 10348781 10349395 -242907188 + L1MB7 LINE L1 4465 5081 -1065 1485 114 5 0 chr2 10349423 10349616 -242906967 + AluSq SINE Alu 1 194 -119 2415 162 54 2 chr2 10349655 10350136 -242906447 + L1MB7 LINE L1 5660 6165 -19 2362 108 0 3 chr2 10350285 10350590 -242905993 + AluSq SINE Alu 1 304 -9 380 290 30 77 chr2 10350610 10350779 -242905804 + L3 LINE CR1 1415 1575 -2 345 227 0 52 chr2 10351662 10351759 -242904824 - MIR SINE MIR -78 130 39 910 140 11 11 chr2 10352372 10352551 -242904032 + CT-rich Low_complexity Low_complexity 2 180 0 223 147 0 0 chr2 10352551 10352585 -242903998 + (TTCC)n Simple_repeat Simple_repeat 3 36 0 1071 268 70 6 chr2 10352587 10352901 -242903682 - L1ME LINE L1 -362 5804 5471 2090 102 7 21 chr2 10353677 10353989 -242902594 - AluSx SINE Alu 0 309 2 307 247 34 0 chr2 10354578 10354667 -242901916 - L1MC5 LINE L1 -62 7899 7808 822 157 0 15 chr2 10354821 10354955 -242901628 + FLAM_C SINE Alu 1 132 -1 447 285 99 17 chr2 10355007 10355179 -242901404 - MIR SINE MIR -15 247 62 21 36 0 0 chr2 10355435 10355463 -242901120 + GC_rich Low_complexity Low_complexity 1 28 0 222 37 0 0 chr2 10355962 10355989 -242900594 + (TTCA)n Simple_repeat Simple_repeat 1 27 0 2213 137 0 0 chr2 10356008 10356315 -242900268 + AluSx SINE Alu 1 307 -5 315 254 0 0 chr2 10356350 10356417 -242900166 - MIR SINE MIR -106 156 90 360 233 78 0 chr2 10356428 10356518 -242900065 - MER91A DNA MER1_type -11 185 89 384 262 37 9 chr2 10356994 10357101 -242899482 + L3 LINE CR1 1377 1486 -91 593 269 88 0 chr2 10357962 10358133 -242898450 + MIR SINE MIR 77 262 0 325 234 72 36 chr2 10361143 10361254 -242895329 + MIR SINE MIR 65 179 -83 2239 114 10 0 chr2 10361480 10361786 -242894797 + AluSg SINE Alu 1 309 -1 230 312 18 37 chr2 10362175 10362284 -242894299 + MIR3 SINE MIR 93 199 -9 196 259 37 0 chr2 10363408 10363462 -242893121 + MER5A DNA MER1_type 60 115 -74 1917 123 0 49 chr2 10363513 10363821 -242892762 + AluSx SINE Alu 1 293 -19 520 303 135 14 chr2 10364959 10365256 -242891327 + L1ME4a LINE L1 5534 5866 -255 1701 110 0 9 chr2 10365257 10365485 -242891098 - AluJb SINE Alu -15 297 72 7386 210 60 34 chr2 10365485 10366372 -242890211 + L1ME1 LINE L1 3439 4301 -1865 1846 178 3 3 chr2 10366372 10366676 -242889907 + AluJb SINE Alu 1 304 -8 7386 210 60 34 chr2 10366676 10368428 -242888155 + L1ME1 LINE L1 4301 6160 -6 339 281 0 73 chr2 10369382 10369546 -242887037 + L1ME4a LINE L1 5967 6118 -3 387 0 0 0 chr2 10369550 10369593 -242886990 + (GA)n Simple_repeat Simple_repeat 1 43 0 252 0 0 0 chr2 10369592 10369620 -242886963 + (TG)n Simple_repeat Simple_repeat 2 29 0 * 463 216 114 17 chr2 10369938 10370152 -242886431 - L1ME3 LINE L1 -9 6161 5902 268 213 0 43 chr2 10370155 10370343 -242886240 + (TA)n Simple_repeat Simple_repeat 1 180 0 217 203 0 41 chr2 10370355 10370478 -242886105 + (TA)n Simple_repeat Simple_repeat 2 119 0 794 300 92 13 chr2 10370497 10370877 -242885706 - L1ME3 LINE L1 -254 5916 5507 2282 105 10 0 chr2 10371070 10371376 -242885207 + AluSx SINE Alu 1 309 -3 425 270 93 39 chr2 10371914 10372118 -242884465 + MIR SINE MIR 45 259 -3 209 300 120 27 chr2 10372620 10372770 -242883813 + MIR3 SINE MIR 7 170 -38 1316 296 41 52 chr2 10373296 10373867 -242882716 - L1MEd LINE L1 -4869 1250 689 2352 112 0 3 chr2 10373867 10374171 -242882412 - AluSc SINE Alu -6 303 1 1316 296 41 52 chr2 10374171 10374453 -242882130 - L1MEd LINE L1 -5430 689 406 587 284 134 50 chr2 10374839 10375220 -242881363 - MLT1L LTR MaLR -4 611 199 769 64 54 25 chr2 10375513 10375828 -242880755 + (CA)n Simple_repeat Simple_repeat 1 324 0 643 76 64 18 chr2 10375841 10376012 -242880571 + (CA)n Simple_repeat Simple_repeat 2 180 0 462 119 63 13 chr2 10376044 10376203 -242880380 + (CA)n Simple_repeat Simple_repeat 2 168 0 224 279 27 54 chr2 10376842 10376953 -242879630 + L2 LINE L2 2915 3022 -291 438 295 66 0 chr2 10377059 10377181 -242879402 + L2 LINE L2 3183 3312 -1 1621 196 17 26 chr2 10377901 10378248 -242878335 - MLT1A2 LTR MaLR -7 367 24 180 0 0 0 chr2 10378571 10378591 -242877992 + (GGGA)n Simple_repeat Simple_repeat 2 21 0 339 285 46 31 chr2 10378789 10378919 -242877664 + MLT1B LTR MaLR 235 366 -24 291 279 95 7 chr2 10379789 10379936 -242876647 + (CCCCG)n Simple_repeat Simple_repeat 5 164 0 389 239 18 18 chr2 10381208 10381321 -242875262 - MLT1L LTR MaLR -309 196 84 233 250 22 76 chr2 10382027 10382119 -242874464 + MIR3 SINE MIR 101 187 -21 1163 143 46 6 chr2 10382136 10382512 -242874071 - MSTB LTR MaLR 0 426 1 229 346 59 7 chr2 10382516 10382652 -242873931 - MIR SINE MIR -12 250 108 228 276 75 0 chr2 10383671 10383784 -242872799 - MIR SINE MIR -69 139 30 2525 83 3 0 chr2 10384389 10384691 -242871892 - AluSx SINE Alu -9 303 1 568 233 52 65 chr2 10384782 10385014 -242871569 + MIR SINE MIR 23 251 -11 1529 256 81 5 chr2 10385090 10385511 -242871072 - MLT1J LTR MaLR -58 453 1 2187 112 7 0 chr2 10385566 10385860 -242870723 - AluY SINE Alu -15 296 1 2436 51 3 45 chr2 10385871 10386182 -242870401 - AluY SINE Alu -13 298 1 1880 120 6 70 chr2 10386471 10386787 -242869796 + AluJb SINE Alu 1 296 -16 2345 81 3 10 chr2 10387331 10387626 -242868957 - AluSq SINE Alu -16 297 5 1998 140 20 3 chr2 10387631 10387924 -242868659 - AluSx SINE Alu -14 298 1 233 222 0 0 chr2 10388215 10388260 -242868323 + MIR3 SINE MIR 112 156 -52 434 189 0 115 chr2 10388729 10388851 -242867732 + FLAM_A SINE Alu 1 108 -34 2382 103 3 0 chr2 10388992 10389303 -242867280 + AluSq SINE Alu 1 312 -1 947 219 52 18 chr2 10389572 10390010 -242866573 + MLT1C LTR MaLR 1 467 0 443 303 34 11 chr2 10390164 10390342 -242866241 - ERVL LTR ERVL -2214 3550 3369 2178 139 0 0 chr2 10390770 10391079 -242865504 - AluSx SINE Alu -2 310 2 428 225 71 59 chr2 10392679 10392848 -242863735 + MIR SINE MIR 20 190 -72 299 299 331 0 chr2 10392889 10393046 -242863537 - MIR SINE MIR -48 214 6 219 298 32 48 chr2 10393328 10393452 -242863131 - MIR SINE MIR -68 194 73 216 226 16 16 chr2 10394158 10394220 -242862363 - MER5B DNA MER1_type -110 68 7 1801 78 5 0 chr2 10394702 10394921 -242861662 + AluSg/x SINE Alu 80 299 -11 2350 98 0 7 chr2 10395545 10395851 -242860732 + AluSq SINE Alu 1 304 -9 1739 158 13 43 chr2 10396262 10396566 -242860017 + AluJo SINE Alu 1 295 -17 375 209 6 122 chr2 10396612 10396784 -242859799 + Charlie7 DNA MER1_type 317 468 -2144 1978 250 67 46 chr2 10396801 10397517 -242859066 + MER21B LTR ERV1 22 752 -111 3310 235 113 87 chr2 10397554 10397875 -242858708 + Charlie7 DNA MER1_type 527 838 -1774 2269 99 6 16 chr2 10397875 10398188 -242858395 - AluY SINE Alu -1 310 1 3310 235 113 87 chr2 10398188 10398210 -242858373 + Charlie7 DNA MER1_type 838 858 -1754 1930 136 7 20 chr2 10398210 10398511 -242858072 - AluJo SINE Alu -15 297 1 3310 235 113 87 chr2 10398511 10398891 -242857692 + Charlie7 DNA MER1_type 858 1227 -1385 2783 39 0 0 chr2 10398891 10399202 -242857381 + AluY SINE Alu 1 311 0 3310 235 113 87 chr2 10399202 10399844 -242856739 + Charlie7 DNA MER1_type 1227 1851 -761 2341 96 7 13 chr2 10399844 10400147 -242856436 - AluSx SINE Alu -11 301 1 3310 235 113 87 chr2 10400147 10400720 -242855863 + Charlie7 DNA MER1_type 1851 2522 -90 2196 109 0 3 chr2 10400720 10401024 -242855559 + AluSg SINE Alu 1 303 0 3310 235 113 87 chr2 10401024 10401050 -242855533 + Charlie7 DNA MER1_type 2522 2546 -66 2387 78 7 3 chr2 10401083 10401391 -242855192 + AluYb8 SINE Alu 2 310 -8 915 301 152 12 chr2 10401416 10401924 -242854659 + MLT1H1 LTR MaLR 26 555 0 654 139 18 96 chr2 10402022 10402055 -242854528 - L1MB3 LINE L1 -2 6181 6147 2371 97 0 3 chr2 10402055 10402354 -242854229 + AluSx SINE Alu 1 298 -14 359 21 21 0 chr2 10402358 10402406 -242854177 + (CA)n Simple_repeat Simple_repeat 2 50 0 654 139 18 96 chr2 10402406 10402533 -242854050 - L1MB3 LINE L1 -39 6144 6029 1119 84 0 14 chr2 10402536 10402679 -242853904 + AluSq/x SINE Alu 1 141 -171 2211 121 6 10 chr2 10402679 10402993 -242853590 + AluSq SINE Alu 1 313 0 955 170 37 54 chr2 10402993 10403205 -242853378 - L1MB3 LINE L1 -144 6039 5830 1943 137 9 44 chr2 10403205 10403374 -242853209 - AluSx SINE Alu -8 304 150 606 63 0 0 chr2 10403374 10403453 -242853130 + (TTTC)n Simple_repeat Simple_repeat 2 80 0 1943 137 9 44 chr2 10403453 10403598 -242852985 - AluSx SINE Alu -162 150 1 955 170 37 54 chr2 10403598 10403626 -242852957 - L1MB3 LINE L1 -353 5830 5803 2136 128 7 0 chr2 10403626 10403922 -242852661 + AluSx SINE Alu 1 298 -14 1785 188 114 53 chr2 10404761 10405250 -242851333 + MLT2B1 LTR ERVL 2 520 0 375 256 120 23 chr2 10406850 10406983 -242849600 - MLT1J LTR MaLR -219 292 147 3308 153 52 48 chr2 10408409 10408534 -242848049 + MER50 LTR ERV1 1 124 -610 2221 117 16 0 chr2 10408534 10408841 -242847742 + AluSx SINE Alu 1 312 0 3308 153 52 48 chr2 10408841 10409445 -242847138 + MER50 LTR ERV1 124 733 -1 264 77 0 0 chr2 10409511 10409550 -242847033 + (TC)n Simple_repeat Simple_repeat 1 39 0 673 170 67 0 chr2 10409757 10409892 -242846691 - MLT1C LTR MaLR 0 467 324 2281 98 10 3 chr2 10410871 10411168 -242845415 + AluSq SINE Alu 1 299 -14 1174 253 10 3 chr2 10411168 10411472 -242845111 + L1MB4 LINE L1 5598 5903 -277 1236 187 67 0 chr2 10411825 10412093 -242844490 + L1MB3 LINE L1 5856 6141 -42 2573 75 3 0 chr2 10412095 10412401 -242844182 + AluSp SINE Alu 1 307 -6 1177 237 48 0 chr2 10413498 10413810 -242842773 - L1MC3 LINE L1 0 7785 7459 180 282 0 0 chr2 10413811 10413850 -242842733 + L2 LINE L2 3139 3177 -95 684 258 32 53 chr2 10414217 10414500 -242842083 + MLT1C LTR MaLR 189 465 -2 468 270 88 7 chr2 10414511 10414659 -242841924 - L2 LINE L2 0 3313 3154 2200 128 0 0 chr2 10414667 10414971 -242841612 + AluSx SINE Alu 3 306 -6 236 222 32 63 chr2 10415739 10415802 -242840781 - L2 LINE L2 0 3272 3212 245 262 68 0 chr2 10416519 10416622 -242839961 - MIR SINE MIR -131 131 22 335 207 25 74 chr2 10417346 10417467 -242839116 - MIR SINE MIR -56 206 92 542 164 199 0 chr2 10417915 10418061 -242838522 + MER5A DNA MER1_type 1 175 -14 271 288 75 7 chr2 10418063 10418209 -242838374 + L2 LINE L2 2953 3108 -205 2314 109 3 7 chr2 10420096 10420400 -242836183 - AluSq SINE Alu -10 303 1 298 268 101 57 chr2 10420722 10420950 -242835633 - MER112 DNA MER1_type -6 254 17 1052 75 0 0 chr2 10420958 10421092 -242835491 + AluSg/x SINE Alu 174 307 -3 2342 105 7 7 chr2 10421096 10421402 -242835181 + AluSc SINE Alu 2 307 -2 2270 121 3 6 chr2 10421463 10421776 -242834807 + AluSx SINE Alu 1 312 0 493 244 71 56 chr2 10421941 10422138 -242834445 + L2 LINE L2 1381 1580 -1734 367 207 79 43 chr2 10422178 10422318 -242834265 + MER53 DNA DNA 3 147 -42 1251 199 106 23 chr2 10422336 10422741 -242833842 + MLT1F LTR MaLR 89 542 0 701 264 147 15 chr2 10422751 10423077 -242833506 + L2 LINE L2 1590 1958 -1356 404 256 8 60 chr2 10423078 10423195 -242833388 - L2 LINE L2 -2 3311 3201 364 261 93 25 chr2 10423249 10423410 -242833173 + L1MC5 LINE L1 7730 7901 -60 588 292 51 4 chr2 10423510 10423779 -242832804 - L2 LINE L2 -298 3015 2726 1178 236 8 4 chr2 10423806 10424065 -242832518 + AluJo SINE Alu 21 280 -32 389 317 38 43 chr2 10424105 10424291 -242832292 + L2 LINE L2 2344 2528 -786 2521 100 0 0 chr2 10424799 10425110 -242831473 + AluSx SINE Alu 1 311 -1 620 274 54 0 chr2 10425124 10425292 -242831291 + L1PB4 LINE L1 5966 6142 -14 394 222 48 84 chr2 10425364 10425531 -242831052 + L1MC4a LINE L1 5764 5924 -1884 1738 92 0 0 chr2 10425674 10425891 -242830692 - AluY SINE Alu 0 311 95 569 41 0 0 chr2 10425891 10425964 -242830619 + AluY SINE Alu 27 99 -212 361 298 101 24 chr2 10426773 10426981 -242829602 - MIR SINE MIR -31 231 8 298 276 14 48 chr2 10427628 10427773 -242828810 + GA-rich Low_complexity Low_complexity 4 143 0 583 183 58 8 chr2 10428020 10428140 -242828443 - FLAM_A SINE Alu -8 134 9 1004 182 43 34 chr2 10428337 10428510 -242828073 - MER46A DNA MER2_type -2495 236 59 1802 152 139 16 chr2 10428510 10428891 -242827692 + MSTA LTR MaLR 1 428 0 1004 182 43 34 chr2 10428891 10428926 -242827657 - MER46A DNA MER2_type -2672 59 26 2412 89 0 0 chr2 10430622 10430915 -242825668 - AluSc SINE Alu -16 293 1 187 412 11 35 chr2 10431145 10431429 -242825154 + L2 LINE L2 2460 2736 -578 209 319 34 50 chr2 10431478 10431597 -242824986 + L2 LINE L2 3073 3189 -83 2387 98 0 0 chr2 10431789 10432086 -242824497 + AluY SINE Alu 1 297 -14 3939 173 40 12 chr2 10433479 10434301 -242822282 + L1MB7 LINE L1 5321 6165 -19 281 281 99 23 chr2 10436697 10436868 -242819715 - MIR SINE MIR -46 216 33 531 43 0 0 chr2 10437137 10437207 -242819376 + MER41A LTR ERV1 397 466 -88 252 250 31 0 chr2 10437763 10437827 -242818756 + C-rich Low_complexity Low_complexity 4 69 0 22 0 0 0 chr2 10438396 10438418 -242818165 + AT_rich Low_complexity Low_complexity 1 22 0 330 321 132 5 chr2 10438569 10438759 -242817824 + L1MB8 LINE L1 5448 5661 -2147 1679 153 29 4 chr2 10438968 10439249 -242817334 + AluJo SINE Alu 1 288 -24 248 261 87 33 chr2 10439713 10439805 -242816778 + L2 LINE L2 3158 3254 -18 204 381 137 6 chr2 10440757 10441072 -242815511 + L2 LINE L2 2127 2482 -832 290 329 0 12 chr2 10442558 10442643 -242813940 - L2 LINE L2 -9 3304 3221 2548 181 34 27 chr2 10442747 10443044 -242813539 + L1MB8 LINE L1 5522 5816 -362 1861 140 49 6 chr2 10443044 10443372 -242813211 + MER2 DNA MER2_type 2 343 -1 2548 181 34 27 chr2 10443372 10443694 -242812889 + L1MB8 LINE L1 5816 6145 -33 227 224 0 0 chr2 10443697 10443746 -242812837 + L1MB8 LINE L1 6097 6145 -33 226 224 0 0 chr2 10443749 10443798 -242812785 + L1MB8 LINE L1 6097 6145 -33 378 209 0 0 chr2 10443801 10443887 -242812696 + L1MB7 LINE L1 6099 6184 0 381 152 30 0 chr2 10443938 10444004 -242812579 + Tigger2 DNA MER2_type 2 69 -2649 * 1731 146 56 11 chr2 10443990 10444346 -242812237 + Tigger2 DNA MER2_type 2270 2641 -77 1137 120 0 0 chr2 10444483 10444700 -242811883 + (TA)n Simple_repeat Simple_repeat 1 217 0 2299 88 0 7 chr2 10444700 10444994 -242811589 - AluSc SINE Alu -17 292 1 352 203 0 0 chr2 10444997 10445061 -242811522 + Tigger2 DNA MER2_type 2654 2717 -1 181 325 62 12 chr2 10445142 10445222 -242811361 - L2 LINE L2 -14 3258 3175 985 121 143 27 chr2 10445631 10445855 -242810728 - L1MB3 LINE L1 0 6183 5934 1733 131 39 18 chr2 10447540 10447822 -242808761 - AluJo SINE Alu -15 297 10 216 218 0 0 chr2 10449013 10449104 -242807479 + GA-rich Low_complexity Low_complexity 1 91 0 1768 149 21 4 chr2 10449147 10449461 -242807122 + AluJb SINE Alu 1 312 0 181 340 65 75 chr2 10449528 10449807 -242806776 - L2 LINE L2 -674 2640 2365 22 56 0 0 chr2 10450066 10450102 -242806481 + AT_rich Low_complexity Low_complexity 1 36 0 2382 75 3 7 chr2 10450553 10450861 -242805722 - AluSg SINE Alu -3 307 1 557 255 57 0 chr2 10450913 10451070 -242805513 + HAL1 LINE L1 1 166 -2341 312 267 181 36 chr2 10451263 10451484 -242805099 + HAL1 LINE L1 599 851 -1656 497 249 90 37 chr2 10451606 10451795 -242804788 - HAL1 LINE L1 -761 1746 1548 844 276 117 8 chr2 10451811 10452132 -242804451 + HAL1 LINE L1 1771 2142 -365 1643 164 31 31 chr2 10452132 10452425 -242804158 + AluJo SINE Alu 1 293 -19 844 276 117 8 chr2 10452425 10452487 -242804096 + HAL1 LINE L1 2142 2196 -311 230 133 0 22 chr2 10452545 10452590 -242803993 + (GA)n Simple_repeat Simple_repeat 2 45 0 348 280 43 0 chr2 10452590 10452683 -242803900 + HAL1 LINE L1 2334 2430 -77 1574 131 85 4 chr2 10452740 10452999 -242803584 - AluJb SINE Alu -10 302 23 2078 122 0 0 chr2 10453007 10453315 -242803268 - AluSx SINE Alu 0 321 14 24 85 0 0 chr2 10453385 10453444 -242803139 + AT_rich Low_complexity Low_complexity 1 59 0 3339 111 40 32 chr2 10453613 10454136 -242802447 - MER1A DNA MER1_type 0 527 1 199 279 29 15 chr2 10454318 10454386 -242802197 + L2 LINE L2 3245 3313 0 881 162 6 30 chr2 10454397 10454564 -242802019 - FRAM SINE Alu -18 158 1 2711 226 85 31 chr2 10455497 10456449 -242800134 + Tigger6a DNA MER2_type 58 1060 -23 279 324 29 10 chr2 10457213 10457315 -242799268 - MIR3 SINE MIR -54 154 51 280 225 90 9 chr2 10457835 10457946 -242798637 + L1ME4a LINE L1 5735 5854 -267 255 297 74 20 chr2 10458027 10458175 -242798408 + L1ME4a LINE L1 5966 6121 0 2327 92 0 3 chr2 10458481 10458787 -242797796 - AluY SINE Alu -6 305 1 1722 162 18 7 chr2 10458961 10459239 -242797344 + AluJb SINE Alu 7 287 -25 323 192 322 19 chr2 10459388 10459774 -242796809 + LTR50 LTR ERVL 136 736 -59 2028 125 40 15 chr2 10461358 10461687 -242794896 - MER1B DNA MER1_type 0 337 1 678 159 46 26 chr2 10462258 10462409 -242794174 - MER103 DNA DNA -1 165 12 708 295 14 5 chr2 10462433 10462643 -242793940 - MIR SINE MIR -45 217 6 639 213 104 97 chr2 10463555 10463766 -242792817 + MIR SINE MIR 3 216 -46 1788 154 59 0 chr2 10463766 10464052 -242792531 + AluSx SINE Alu 1 303 -9 639 213 104 97 chr2 10464052 10464100 -242792483 + MIR SINE MIR 216 262 0 234 0 0 0 chr2 10465174 10465200 -242791383 + (TTA)n Simple_repeat Simple_repeat 2 27 0 475 200 0 0 chr2 10465200 10465280 -242791303 - FLAM SINE Alu -22 121 42 1110 151 5 15 chr2 10465399 10465605 -242790978 + L1MA8 LINE L1 6083 6286 -5 2227 75 0 42 chr2 10466729 10467036 -242789547 + AluY SINE Alu 1 294 -17 490 210 51 80 chr2 10467238 10467376 -242789207 + L2 LINE L2 3176 3309 -4 488 200 183 8 chr2 10468395 10468515 -242788068 - FLAM_A SINE Alu -1 141 1 1692 149 12 81 chr2 10468925 10469057 -242787526 + AluJo SINE Alu 1 140 -172 2207 114 3 22 chr2 10469057 10469374 -242787209 + AluSx SINE Alu 1 311 -1 1692 149 12 81 chr2 10469374 10469576 -242787007 + AluJo SINE Alu 140 312 0 2023 113 0 4 chr2 10469932 10470206 -242786377 - AluSx SINE Alu -18 294 22 893 162 125 97 chr2 10470232 10470448 -242786135 + AluJo SINE Alu 84 305 -7 210 150 0 0 chr2 10471296 10471336 -242785247 + (TAA)n Simple_repeat Simple_repeat 2 41 0 2228 115 0 0 chr2 10471388 10471683 -242784900 - AluSx SINE Alu -17 295 1 432 155 28 0 chr2 10471745 10471816 -242784767 - AluJ/FRAM SINE Alu -20 292 220 609 258 48 70 chr2 10471827 10472157 -242784426 - MER46C DNA MER2_type -11 327 5 491 281 203 91 chr2 10472993 10473641 -242782942 + HAL1 LINE L1 57 631 -1876 2323 89 30 0 chr2 10473641 10473943 -242782640 - AluSx SINE Alu -1 311 1 491 281 203 91 chr2 10473943 10473973 -242782610 + HAL1 LINE L1 631 656 -1851 2050 154 0 0 chr2 10473973 10474272 -242782311 - AluJb SINE Alu -13 299 1 491 281 203 91 chr2 10474272 10474306 -242782277 + HAL1 LINE L1 656 850 -1657 380 279 236 54 chr2 10474344 10474734 -242781849 - L2 LINE L2 0 3313 2853 1084 210 82 14 chr2 10474758 10475049 -242781534 + L1M4 LINE L1 799 1109 -5433 1166 206 112 17 chr2 10475122 10475463 -242781120 + L1MB7 LINE L1 5725 6117 -67 874 140 0 22 chr2 10475463 10475599 -242780984 - FLAM_A SINE Alu 0 133 1 1166 206 112 17 chr2 10475599 10475674 -242780909 + L1MB7 LINE L1 6117 6184 0 250 257 53 82 chr2 10475690 10475896 -242780687 - L1MC4 LINE L1 -404 7638 7439 234 81 0 0 chr2 10476552 10476589 -242779994 + (TATG)n Simple_repeat Simple_repeat 1 37 0 1766 132 17 38 chr2 10476589 10476876 -242779707 - AluJo SINE Alu -31 281 1 1794 172 10 3 chr2 10478214 10478517 -242778066 - AluSx SINE Alu -7 305 1 1888 178 0 0 chr2 10478739 10479037 -242777546 + AluJo SINE Alu 5 302 -10 937 173 32 5 chr2 10479338 10479523 -242777060 - MER3 DNA MER1_type 0 209 20 230 261 0 0 chr2 10479605 10479670 -242776913 + L1ME4a LINE L1 5755 5819 -1989 213 393 87 0 chr2 10480515 10480698 -242775885 + L2 LINE L2 2645 2843 -471 205 353 147 46 chr2 10480800 10481106 -242775477 + L2 LINE L2 2933 3269 -3 753 132 0 35 chr2 10481241 10481385 -242775198 + L1MC/D LINE L1 5420 5558 -2437 * 754 206 36 10 chr2 10481384 10481578 -242775005 - HAL1 LINE L1 -651 1856 1658 1131 31 0 0 chr2 10481597 10481725 -242774858 - SVA Other Other 0 1386 1259 357 138 0 0 chr2 10481726 10481784 -242774799 + Alu SINE Alu 236 293 -9 494 300 84 58 chr2 10481785 10482095 -242774488 + HAL1 LINE L1 1855 2172 -335 3936 173 32 5 chr2 10482098 10482856 -242773727 + L1MC1 LINE L1 5544 6321 -12 1849 153 10 32 chr2 10483315 10483629 -242772954 + AluJo SINE Alu 1 307 -5 401 277 10 10 chr2 10483679 10483780 -242772803 - L2 LINE L2 -25 3288 3188 2247 75 0 7 chr2 10484832 10485152 -242771431 + AluY SINE Alu 16 311 0 828 136 40 40 chr2 10485164 10485340 -242771243 + L1PA16 LINE L1 5991 6166 0 21 0 0 0 chr2 10485340 10485361 -242771222 + AT_rich Low_complexity Low_complexity 1 21 0 856 201 69 0 chr2 10486216 10486405 -242770178 - MER105 DNA DNA 0 204 3 22 0 0 0 chr2 10486790 10486812 -242769771 + AT_rich Low_complexity Low_complexity 1 22 0 280 261 134 8 chr2 10486891 10487025 -242769558 + L1ME4a LINE L1 5969 6119 -2 992 202 5 11 chr2 10487324 10487512 -242769071 - AluJo SINE Alu -125 187 1 409 322 35 14 chr2 10487641 10487784 -242768799 - MIR SINE MIR -111 151 6 459 289 72 0 chr2 10487785 10487854 -242768729 + MIR3 SINE MIR 34 97 -111 2328 98 0 10 chr2 10487854 10488161 -242768422 + AluY SINE Alu 1 304 -7 459 289 72 0 chr2 10488161 10488243 -242768340 + MIR3 SINE MIR 97 196 -12 2088 80 8 0 chr2 10489141 10489404 -242767179 - AluSp SINE Alu -15 298 34 473 261 33 20 chr2 10489568 10489721 -242766862 - L2 LINE L2 0 3313 3159 881 176 14 0 chr2 10489726 10489874 -242766709 - MER58A DNA MER1_type -36 188 39 820 189 47 115 chr2 10489895 10490233 -242766350 + LTR37A LTR E