316 200 0 0 chr17 1 56 -89504497 - Alu SINE Alu -247 55 1 2325 82 10 0 chr17 66 371 -89504182 - AluSx SINE Alu -4 308 1 2014 121 3 16 chr17 684 851 -89503702 - AluJb SINE Alu -11 301 138 2138 105 3 7 chr17 851 1156 -89503397 - AluY SINE Alu -7 304 1 2014 121 3 16 chr17 1156 1293 -89503260 - AluJb SINE Alu -174 138 1 1874 101 0 8 chr17 1441 1698 -89502855 - AluSx SINE Alu -57 255 1 223 278 0 0 chr17 1990 2044 -89502509 - L2 LINE L2 -2 3270 3217 2232 106 3 0 chr17 2215 2516 -89502037 + AluSx SINE Alu 1 302 -10 210 333 42 0 chr17 3102 3198 -89501355 + MIR3 SINE MIR 109 208 0 485 294 63 50 chr17 3461 3517 -89501036 - MIR SINE MIR 0 262 208 2202 91 0 10 chr17 3517 3825 -89500728 - AluY SINE Alu -6 305 1 485 294 63 50 chr17 3825 3989 -89500564 - MIR SINE MIR -54 208 39 1523 97 0 18 chr17 4525 4752 -89499801 - AluSg SINE Alu -87 223 1 1310 130 0 5 chr17 5897 6097 -89498456 + AluSq SINE Alu 30 228 -85 2368 67 13 13 chr17 6232 6367 -89498186 + AluSx SINE Alu 1 135 -177 2051 120 3 7 chr17 6367 6675 -89497878 + AluSp SINE Alu 1 307 -6 2368 67 13 13 chr17 6675 6851 -89497702 + AluSx SINE Alu 134 312 0 2390 54 0 0 chr17 7098 7396 -89497157 + AluY SINE Alu 1 298 -13 1633 129 4 0 chr17 8073 8313 -89496240 + AluSx SINE Alu 54 294 -18 208 293 0 0 chr17 8450 8508 -89496045 - L2 LINE L2 -638 2676 2619 837 141 7 28 chr17 8516 8658 -89495895 + AluJo SINE Alu 1 139 -173 1607 148 0 76 chr17 8660 8801 -89495752 + AluJo SINE Alu 5 110 -202 2460 42 0 0 chr17 8801 9090 -89495463 + AluY SINE Alu 5 293 -18 1607 148 0 76 chr17 9090 9265 -89495288 + AluJo SINE Alu 110 297 -15 293 174 153 41 chr17 9391 9408 -89495145 + MER5A DNA MER1_type 1 15 -174 1963 118 20 14 chr17 9408 9705 -89494848 + AluSx SINE Alu 3 301 -11 293 174 153 41 chr17 9705 9785 -89494768 + MER5A DNA MER1_type 15 109 -80 980 98 0 0 chr17 10375 10507 -89494046 - AluSq/x SINE Alu -181 132 1 228 160 9 66 chr17 11833 11939 -89492614 + GA-rich Low_complexity Low_complexity 2 101 0 264 287 46 11 chr17 12095 12182 -89492371 + L1MC/D LINE L1 5576 5665 -2143 479 204 0 11 chr17 12185 12278 -89492275 - MER8 DNA MER2_type 0 239 148 2172 100 0 7 chr17 12279 12578 -89491975 + AluSx SINE Alu 1 297 -15 997 67 0 30 chr17 12751 12886 -89491667 + AluY SINE Alu 1 131 -180 2117 84 40 7 chr17 12888 13185 -89491368 + AluY SINE Alu 1 307 -4 285 248 28 9 chr17 13190 13299 -89491254 + L1M4 LINE L1 4499 4609 -1537 2038 112 7 0 chr17 14090 14386 -89490167 - AluSx SINE Alu -14 298 1 1057 81 7 0 chr17 14728 14864 -89489689 - AluSq/x SINE Alu -175 137 1 2384 67 0 16 chr17 14976 15292 -89489261 - AluY SINE Alu 0 311 1 275 158 0 4 chr17 15292 15351 -89489202 - Alu SINE Alu -255 44 1 21 0 0 0 chr17 15620 15641 -89488912 + AT_rich Low_complexity Low_complexity 1 21 0 1230 64 0 0 chr17 16508 16665 -89487888 + AluSq SINE Alu 1 157 -156 632 256 12 12 chr17 17013 17173 -89487380 - MER5A DNA MER1_type -29 160 1 2127 111 0 0 chr17 17297 17594 -89486959 - AluSx SINE Alu -15 297 1 2487 53 3 0 chr17 17599 17901 -89486652 - AluY SINE Alu -8 303 1 23 0 0 0 chr17 17901 17924 -89486629 + AT_rich Low_complexity Low_complexity 1 23 0 804 147 0 0 chr17 17979 18108 -89486445 - AluSc SINE Alu -5 304 176 867 68 17 0 chr17 18209 18327 -89486226 + AluY SINE Alu 181 300 -11 243 88 0 0 chr17 18707 18741 -89485812 + (GGGAGA)n Simple_repeat Simple_repeat 3 36 0 712 75 0 0 chr17 18817 18911 -89485642 - AluY SINE Alu -14 297 204 1792 89 0 0 chr17 18911 19146 -89485407 - AluSc SINE Alu -74 235 1 388 244 16 11 chr17 19433 19559 -89484994 + MIR SINE MIR 104 229 -33 375 192 83 154 chr17 20061 20130 -89484423 - MER2 DNA MER2_type 0 345 273 2129 112 0 0 chr17 20130 20434 -89484119 + AluSx SINE Alu 1 304 -8 1890 118 13 41 chr17 20435 20749 -89483804 + AluSx SINE Alu 1 305 -7 375 192 83 154 chr17 20749 20917 -89483636 - MER2 DNA MER2_type -71 274 123 438 148 28 46 chr17 20918 21026 -89483527 + L1MA4 LINE L1 6195 6300 0 445 235 52 52 chr17 21063 21199 -89483354 - MER2 DNA MER2_type -209 136 1 201 231 62 0 chr17 21248 21313 -89483240 - MER5B DNA MER1_type -106 72 4 1906 144 3 7 chr17 21860 22159 -89482394 - AluSx SINE Alu -14 298 1 311 256 31 62 chr17 22161 22290 -89482263 - HAL1 LINE L1 -583 1924 1800 780 263 85 18 chr17 22997 23278 -89481275 - MER102b DNA MER1_type 0 341 42 493 343 52 45 chr17 23403 23450 -89481103 - L3 LINE CR1 -860 717 672 2196 111 0 0 chr17 23450 23757 -89480796 - AluSx SINE Alu -5 307 1 493 343 52 45 chr17 23757 23995 -89480558 - L3 LINE CR1 -905 672 430 1485 165 104 4 chr17 24705 24984 -89479569 - AluJo SINE Alu -5 307 1 212 261 0 0 chr17 24988 25034 -89479519 + T-rich Low_complexity Low_complexity 5 50 0 1911 128 0 42 chr17 25446 25758 -89478795 + AluSx SINE Alu 1 299 -13 182 36 0 36 chr17 25950 25978 -89478575 + (CGGGGG)n Simple_repeat Simple_repeat 2 28 0 2123 54 0 0 chr17 27433 27691 -89476862 + AluSx SINE Alu 39 296 -16 1389 137 82 4 chr17 27947 28180 -89476373 + AluJo SINE Alu 14 264 -48 2116 111 0 10 chr17 28358 28656 -89475897 + AluSx SINE Alu 1 295 -17 2000 151 0 0 chr17 30030 30341 -89474212 - AluSx SINE Alu -1 311 1 447 71 0 0 chr17 30341 30397 -89474156 - AluSq/x SINE Alu -177 135 80 1420 142 0 0 chr17 30399 30611 -89473942 - AluSq SINE Alu -101 212 1 268 348 68 59 chr17 30737 30973 -89473580 - L2 LINE L2 -8 3264 3027 1954 112 18 3 chr17 31089 31375 -89473178 - AluSg SINE Alu -20 290 1 1712 165 34 3 chr17 31433 31724 -89472829 - AluJb SINE Alu -10 302 3 559 149 0 26 chr17 32799 32967 -89471586 + AluSq SINE Alu 1 206 -107 2099 110 3 0 chr17 33174 33466 -89471087 - AluSx SINE Alu -19 293 1 2030 119 10 0 chr17 33469 33762 -89470791 - AluSq SINE Alu -17 296 1 267 31 0 0 chr17 34304 34336 -89470217 + (TG)n Simple_repeat Simple_repeat 2 33 0 1500 182 7 20 chr17 34336 34493 -89470060 - AluJo SINE Alu -20 292 139 1975 89 32 0 chr17 34493 34774 -89469779 - AluSg SINE Alu -8 302 13 1500 182 7 20 chr17 34774 34912 -89469641 - AluJo SINE Alu -173 139 1 1408 93 15 0 chr17 35631 35835 -89468718 - AluSg/x SINE Alu -16 296 90 2358 77 0 3 chr17 35938 36238 -89468315 - AluSp SINE Alu -14 299 1 545 242 47 32 chr17 36240 36430 -89468123 - Charlie2 DNA MER1_type -556 2306 2114 455 137 41 0 chr17 36444 36517 -89468036 + FLAM_A SINE Alu 56 131 -11 952 275 30 0 chr17 36518 36780 -89467773 - Charlie2 DNA MER1_type -737 2125 1856 2308 80 3 0 chr17 36794 37096 -89467457 - AluSx SINE Alu -9 303 1 536 268 22 0 chr17 37218 37356 -89467197 - Charlie2 DNA MER1_type -2713 149 9 2293 95 7 0 chr17 37943 38247 -89466306 - AluSq SINE Alu -7 306 1 1033 89 0 0 chr17 38247 38382 -89466171 - AluSq/x SINE Alu -178 135 1 572 233 25 17 chr17 38386 38506 -89466047 - FLAM_A SINE Alu -15 127 7 2380 42 0 0 chr17 38513 38821 -89465732 - AluY SINE Alu 0 308 1 316 200 0 0 chr17 38832 38892 -89465661 - L1MA6 LINE L1 -5 6295 6236 240 307 162 0 chr17 39081 39224 -89465329 + MIR3 SINE MIR 10 179 -75 383 308 94 23 chr17 39237 39469 -89465084 - MIR SINE MIR -6 256 14 2326 70 3 0 chr17 40561 40862 -89463691 - AluSx SINE Alu -10 302 1 2036 60 53 21 chr17 42003 42286 -89462267 + AluSc SINE Alu 1 292 -17 766 79 4 2 chr17 42356 42597 -89461956 + AluSx SINE Alu 1 290 -19 291 106 0 0 chr17 42717 42764 -89461789 + Alu SINE Alu 254 300 -2 1786 167 7 7 chr17 42825 43130 -89461423 + AluJb SINE Alu 1 305 -7 2270 74 0 0 chr17 43621 43905 -89460648 + AluSq SINE Alu 1 284 -29 201 300 0 67 chr17 43982 44072 -89460481 + L3 LINE CR1 1409 1492 -85 782 240 39 0 chr17 44538 44571 -89459982 + L1MB3 LINE L1 5970 6000 -183 207 0 0 0 chr17 44571 44594 -89459959 + (CGGAA)n Simple_repeat Simple_repeat 2 24 0 782 240 39 0 chr17 44594 44764 -89459789 + L1MB3 LINE L1 6000 6181 -2 2168 93 3 3 chr17 44773 45073 -89459480 + AluSq SINE Alu 1 300 -13 753 167 173 0 chr17 45089 45239 -89459314 + AluJo SINE Alu 122 297 -15 411 270 218 40 chr17 45240 45492 -89459061 - L1ME4a LINE L1 -34 6087 5791 23 0 0 0 chr17 45754 45777 -89458776 + AT_rich Low_complexity Low_complexity 1 23 0 1993 124 10 17 chr17 45777 46076 -89458477 - AluSx SINE Alu -15 297 1 263 373 40 0 chr17 46205 46355 -89458198 - L2 LINE L2 -868 2446 2291 474 291 40 7 chr17 47064 47212 -89457341 - MIR SINE MIR -29 233 81 2149 110 3 0 chr17 47213 47513 -89457040 + AluSx SINE Alu 1 301 -11 895 175 0 0 chr17 48035 48189 -89456364 + AluJo SINE Alu 1 154 -158 2119 102 10 0 chr17 48855 49149 -89455404 - AluSc SINE Alu -12 297 1 1160 99 0 12 chr17 49155 49317 -89455236 - FRAM SINE Alu -17 159 1 1935 104 24 0 chr17 49433 49721 -89454832 - AluSx SINE Alu -17 295 1 1793 92 53 32 chr17 50794 51075 -89453478 + AluSg SINE Alu 9 295 -15 608 300 130 0 chr17 51563 51793 -89452760 - MIR SINE MIR -1 261 2 252 0 0 0 chr17 51892 51920 -89452633 + (TTTA)n Simple_repeat Simple_repeat 1 28 0 1789 152 11 0 chr17 51922 52198 -89452355 - AluJb SINE Alu -33 279 1 2345 80 3 0 chr17 53838 54139 -89450414 - AluSp SINE Alu -10 303 2 2188 101 30 0 chr17 55555 55853 -89448700 + AluSx SINE Alu 1 307 -5 2174 119 3 0 chr17 56296 56599 -89447954 + AluSx SINE Alu 1 304 -8 1038 106 0 0 chr17 56829 56970 -89447583 + AluJb SINE Alu 1 141 -171 26 30 0 0 chr17 56987 57020 -89447533 + AT_rich Low_complexity Low_complexity 1 33 0 324 0 0 0 chr17 57654 57690 -89446863 + (CA)n Simple_repeat Simple_repeat 2 37 0 1743 190 3 0 chr17 57770 58075 -89446478 + AluSx SINE Alu 1 306 -6 2535 33 0 0 chr17 58245 58544 -89446009 + AluY SINE Alu 1 299 -12 461 423 127 14 chr17 59722 60228 -89444325 + L3 LINE CR1 185 747 -830 404 42 0 0 chr17 60228 60276 -89444277 + AluY SINE Alu 155 202 -109 1828 101 8 8 chr17 60288 60545 -89444008 + AluSq SINE Alu 5 261 -52 932 64 29 81 chr17 60645 60741 -89443812 - MER30 DNA MER1_type -60 170 85 2226 101 3 0 chr17 60741 61037 -89443516 - AluSp SINE Alu -16 297 1 932 64 29 81 chr17 61037 61113 -89443440 - MER30 DNA MER1_type -145 85 7 410 263 47 52 chr17 61114 61327 -89443226 + L3 LINE CR1 1018 1229 -348 232 274 88 26 chr17 61520 61633 -89442920 + MLT1K LTR MaLR 97 216 -372 441 257 117 9 chr17 61990 62104 -89442449 + L1MC5 LINE L1 7458 7558 -403 2201 73 0 4 chr17 62104 62379 -89442174 + AluY SINE Alu 23 296 -15 441 257 117 9 chr17 62379 62478 -89442075 + L1MC5 LINE L1 7558 7694 -267 271 272 39 10 chr17 62570 62673 -89441880 + L1MC5 LINE L1 7822 7927 -34 863 192 23 6 chr17 62802 62979 -89441574 + AluJb SINE Alu 121 300 -12 2099 135 3 0 chr17 63048 63359 -89441194 + AluSx SINE Alu 1 312 0 682 268 41 41 chr17 63543 63786 -89440767 - MIR SINE MIR -10 252 10 2177 106 3 0 chr17 65336 65638 -89438915 - AluSp SINE Alu -10 303 1 2317 74 0 0 chr17 65821 66118 -89438435 + AluY SINE Alu 1 297 -14 497 113 38 0 chr17 66279 66359 -89438194 + AluS SINE Alu 1 83 -230 202 244 0 0 chr17 67411 67456 -89437097 + T-rich Low_complexity Low_complexity 1 45 0 565 103 0 0 chr17 68082 68160 -89436393 + AluSq/x SINE Alu 58 135 -178 2096 76 0 28 chr17 68160 68449 -89436104 + AluSx SINE Alu 1 281 -31 397 278 43 43 chr17 70256 70418 -89434135 + MIR3 SINE MIR 5 166 -42 420 287 237 20 chr17 70666 71158 -89433395 - L2 LINE L2 -16 3297 2688 1326 102 0 0 chr17 71233 71420 -89433133 - AluSg/x SINE Alu 0 310 124 2413 49 7 10 chr17 71420 71728 -89432825 - AluY SINE Alu -4 307 1 1795 154 16 3 chr17 71755 72060 -89432493 - AluJb SINE Alu -3 309 1 202 289 141 58 chr17 72068 72189 -89432364 - MIR SINE MIR -122 140 10 2407 83 0 0 chr17 72515 72827 -89431726 - AluSx SINE Alu 0 312 1 832 92 0 0 chr17 74470 74589 -89429964 - AluSx SINE Alu 0 309 191 1042 93 7 0 chr17 74590 74730 -89429823 - AluSx SINE Alu -171 141 1 1644 119 67 28 chr17 74800 75085 -89429468 - AluSg SINE Alu -14 296 1 2163 85 0 0 chr17 75199 75471 -89429082 - AluSc SINE Alu -37 272 1 245 196 0 36 chr17 75587 75643 -89428910 + MLT2D LTR ERVL 1 54 -360 6079 196 18 12 chr17 75646 76947 -89427606 + ERVL LTR ERVL 3031 4338 -1426 5980 167 25 3 chr17 77331 78446 -89426107 + ERVL LTR ERVL 4298 5437 -327 248 217 17 0 chr17 78447 78507 -89426046 - Tigger1 DNA MER2_type -2 2416 2356 2064 131 3 7 chr17 78507 78813 -89425740 + AluSx SINE Alu 1 305 -7 2134 109 3 0 chr17 78814 79116 -89425437 + AluY SINE Alu 1 303 -8 1749 137 53 14 chr17 79116 79651 -89424902 - Tigger1 DNA MER2_type -210 2208 1582 2019 147 0 0 chr17 79652 79951 -89424602 - AluJb SINE Alu -13 299 1 369 0 0 0 chr17 80891 80932 -89423621 + (TG)n Simple_repeat Simple_repeat 2 42 0 2415 64 0 0 chr17 80942 81238 -89423315 - AluY SINE Alu -15 296 1 2064 112 10 10 chr17 81286 81598 -89422955 + AluSx SINE Alu 1 312 0 997 104 8 0 chr17 81633 81767 -89422786 + AluSg/x SINE Alu 144 278 -32 8160 51 24 4 chr17 81767 82754 -89421799 - LTR13 LTR ERVK 0 1007 1 315 0 0 0 chr17 82762 82797 -89421756 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2048 98 0 33 chr17 83544 83850 -89420703 - AluSg SINE Alu -14 296 1 202 280 0 0 chr17 84287 84337 -89420216 + GA-rich Low_complexity Low_complexity 3 52 0 408 208 26 32 chr17 84597 84751 -89419802 + (CGGGG)n Simple_repeat Simple_repeat 3 155 0 195 152 0 0 chr17 85058 85104 -89419449 + G-rich Low_complexity Low_complexity 6 51 0 377 253 86 21 chr17 85313 85486 -89419067 + Charlie2 DNA MER1_type 2423 2610 -252 2311 70 0 26 chr17 85486 85799 -89418754 - AluY SINE Alu -6 305 1 377 253 86 21 chr17 85799 85811 -89418742 + Charlie2 DNA MER1_type 2610 2620 -242 2540 40 0 0 chr17 85899 86196 -89418357 - AluY SINE Alu -14 297 1 848 239 24 0 chr17 86196 86409 -89418144 + Charlie2 DNA MER1_type 2604 2821 -41 244 290 160 10 chr17 86584 86684 -89417869 - MIR SINE MIR -54 208 94 300 281 49 0 chr17 86788 86870 -89417683 + MIR SINE MIR 98 183 -79 230 322 59 67 chr17 87827 88066 -89416487 + MER102a DNA MER1_type 85 321 -9 261 329 58 44 chr17 88636 88773 -89415780 - MIR SINE MIR -54 154 16 813 254 40 20 chr17 92477 92678 -89411875 + MIR SINE MIR 21 225 -37 23 0 0 0 chr17 97886 97909 -89406644 + AT_rich Low_complexity Low_complexity 1 23 0 1807 107 48 38 chr17 99840 100129 -89404424 + AluSg SINE Alu 1 292 -18 708 191 34 14 chr17 100129 100276 -89404277 + MER20 DNA MER1_type 69 218 -1 351 65 0 0 chr17 100674 100720 -89403833 + (TA)n Simple_repeat Simple_repeat 1 46 0 503 228 65 8 chr17 101648 101771 -89402782 - MIR SINE MIR -70 192 63 1800 61 5 0 chr17 102215 102429 -89402124 - AluY SINE Alu -13 298 84 1284 98 5 79 chr17 103493 103696 -89400857 + AluSg SINE Alu 1 188 -122 1609 84 10 0 chr17 103696 103898 -89400655 + AluSq SINE Alu 104 307 -6 1379 223 41 0 chr17 103899 104218 -89400335 + MER63 DNA MER1_type 680 1011 -49 2330 91 0 0 chr17 104243 104529 -89400024 - AluSx SINE Alu -26 286 1 1122 164 0 0 chr17 104903 105068 -89399485 + AluJb SINE Alu 137 301 -11 2098 101 39 3 chr17 105219 105505 -89399048 + AluSc SINE Alu 1 296 -13 213 272 47 6 chr17 105897 106066 -89398487 + (AGGTG)n Simple_repeat Simple_repeat 3 178 0 266 265 29 12 chr17 106104 106274 -89398279 + (AGGTG)n Simple_repeat Simple_repeat 1 173 0 2521 71 0 7 chr17 107373 107682 -89396871 - AluSq SINE Alu -6 307 1 238 116 47 0 chr17 107752 107795 -89396758 - L1MB3 LINE L1 -7 6176 6132 2313 102 0 10 chr17 107795 108098 -89396455 - AluSx SINE Alu -12 300 1 851 173 13 13 chr17 111244 111400 -89393153 + BC200 scRNA scRNA 1 156 -44 1602 132 100 48 chr17 111404 111693 -89392860 + AluJo SINE Alu 1 304 -8 2324 106 0 3 chr17 111992 112293 -89392260 + AluSq SINE Alu 1 300 -13 207 0 0 0 chr17 112594 112617 -89391936 + (A)n Simple_repeat Simple_repeat 1 23 0 2343 78 23 19 chr17 113022 113330 -89391223 - AluSg SINE Alu -1 309 1 2241 122 3 0 chr17 113591 113895 -89390658 - AluSg SINE Alu -5 305 1 2225 111 0 3 chr17 114510 114808 -89389745 + AluSx SINE Alu 1 297 -15 2133 102 9 25 chr17 115280 115595 -89388958 + AluSx SINE Alu 1 310 -2 932 244 59 59 chr17 115907 116146 -89388407 + MER33 DNA MER1_type 1 242 -2343 2129 154 0 0 chr17 116146 116451 -89388102 - AluJo SINE Alu -2 310 6 932 244 59 59 chr17 116451 116535 -89388018 + MER33 DNA MER1_type 241 324 0 1230 209 25 48 chr17 116705 117020 -89387533 - AluJo SINE Alu -4 308 1 2310 114 0 0 chr17 117306 117613 -89386940 + AluSx SINE Alu 1 307 -5 514 217 85 0 chr17 118337 118466 -89386087 + MIR SINE MIR 80 219 -43 2106 130 0 3 chr17 118467 118760 -89385793 + AluJb SINE Alu 1 292 -20 1252 114 0 16 chr17 118768 118952 -89385601 + AluSg/x SINE Alu 128 308 -4 2140 97 41 3 chr17 119080 119370 -89385183 + AluSp SINE Alu 1 301 -12 2290 125 0 0 chr17 120148 120459 -89384094 + AluSx SINE Alu 1 311 -1 240 318 93 6 chr17 120590 120749 -89383804 - MIR SINE MIR -60 148 20 198 246 0 62 chr17 120831 120896 -89383657 - MIR3 SINE MIR -40 168 108 2318 93 3 6 chr17 120927 121238 -89383315 + AluSq SINE Alu 1 310 -3 283 270 180 0 chr17 121701 121812 -89382741 + MIR SINE MIR 12 142 -120 1777 90 0 25 chr17 121988 122232 -89382321 + AluSg/x SINE Alu 70 307 -5 1183 172 31 26 chr17 123372 123544 -89381009 - AluJo SINE Alu -7 305 130 2527 67 3 3 chr17 123544 123844 -89380709 - AluSp SINE Alu -13 300 1 1183 172 31 26 chr17 123844 123898 -89380655 - AluJo SINE Alu -182 130 78 2455 86 7 0 chr17 124205 124508 -89380045 - AluSx SINE Alu -7 305 1 365 97 32 0 chr17 124999 125061 -89379492 + GA-rich Low_complexity Low_complexity 3 66 0 290 212 21 88 chr17 125068 125261 -89379292 + (CAGAGA)n Simple_repeat Simple_repeat 1 180 0 411 257 9 0 chr17 125313 125418 -89379135 + MLT2B1 LTR ERVL 1 106 -414 2032 144 7 3 chr17 125419 125725 -89378828 - AluSq SINE Alu -6 307 1 1691 184 3 7 chr17 125877 126171 -89378382 + AluJo SINE Alu 1 293 -19 280 274 20 89 chr17 126402 126548 -89378005 - MIR3 SINE MIR -58 150 15 1778 128 74 30 chr17 127180 127478 -89377075 + AluJb SINE Alu 1 311 -1 2338 101 3 3 chr17 127594 127901 -89376652 - AluSx SINE Alu -5 307 1 2631 32 9 25 chr17 128409 128725 -89375828 + AluY SINE Alu 1 311 0 2275 83 9 49 chr17 128890 129216 -89375337 - AluSq SINE Alu 0 313 1 1514 153 6 86 chr17 129967 130148 -89374405 - AluJo SINE Alu -10 302 108 450 0 0 0 chr17 130148 130198 -89374355 + (TTTA)n Simple_repeat Simple_repeat 2 51 0 2349 70 0 11 chr17 130198 130485 -89374068 - AluY SINE Alu -27 284 1 1514 153 6 86 chr17 130485 130628 -89373925 - AluJo SINE Alu -202 110 3 310 167 0 77 chr17 131299 131377 -89373176 - AluYa5 SINE Alu -119 182 111 2056 108 32 0 chr17 131377 131655 -89372898 + AluSx SINE Alu 10 296 -16 2438 57 0 0 chr17 131657 131975 -89372578 + AluY SINE Alu 1 318 0 1935 244 98 51 chr17 132322 132900 -89371653 - L1ME2 LINE L1 -10 6154 5528 1550 165 85 0 chr17 132900 133172 -89371381 + AluJb SINE Alu 1 295 -17 1935 244 98 51 chr17 133172 133375 -89371178 - L1ME2 LINE L1 -636 5528 5336 2108 93 11 0 chr17 134839 135108 -89369445 + AluSx SINE Alu 1 272 -40 2076 51 4 19 chr17 135208 135491 -89369062 + AluY SINE Alu 32 310 0 1764 176 0 38 chr17 135565 135878 -89368675 - AluJb SINE Alu -11 301 1 792 233 30 15 chr17 136175 136377 -89368176 - MER20 DNA MER1_type -14 205 1 2370 56 0 3 chr17 137546 137876 -89366677 + AluY SINE Alu 1 329 0 1768 104 120 0 chr17 138428 138687 -89365866 - AluSx SINE Alu -16 296 7 1766 135 53 0 chr17 139712 139993 -89364560 - AluSx SINE Alu -16 296 1 268 338 14 45 chr17 140108 140293 -89364260 - L1MC/D LINE L1 -299 5822 5688 2373 88 7 0 chr17 140293 140590 -89363963 - AluSx SINE Alu -12 300 2 268 338 14 45 chr17 140590 140661 -89363892 - L1MC/D LINE L1 -433 5688 5616 1370 203 29 22 chr17 142300 142616 -89361937 - L1MC2 LINE L1 -9 6335 6018 275 229 134 89 chr17 142616 142773 -89361780 + MER20 DNA MER1_type 53 216 -3 281 264 0 42 chr17 143205 143349 -89361204 + (GGTTG)n Simple_repeat Simple_repeat 2 139 0 232 300 0 39 chr17 143389 143569 -89360984 + (GGTTG)n Simple_repeat Simple_repeat 2 174 0 195 222 22 0 chr17 143768 143813 -89360740 + MIR SINE MIR 105 150 -112 1707 149 46 4 chr17 143993 144255 -89360298 + AluJb SINE Alu 1 273 -39 372 234 0 0 chr17 144257 144351 -89360202 + (CAGA)n Simple_repeat Simple_repeat 3 96 0 2343 78 0 26 chr17 144680 144987 -89359566 + AluY SINE Alu 1 299 -12 761 35 43 9 chr17 145573 145689 -89358864 + (TTTC)n Simple_repeat Simple_repeat 1 120 0 1843 98 78 0 chr17 145691 145946 -89358607 - AluSx SINE Alu -37 275 1 219 296 70 0 chr17 146207 146278 -89358275 - MIR SINE MIR -173 89 14 554 91 0 71 chr17 146376 146475 -89358078 - AluSp/q SINE Alu -10 303 212 290 154 19 0 chr17 146783 146835 -89357718 - MSTA LTR MaLR 0 428 376 * 395 216 0 0 chr17 146833 146907 -89357646 - AluJ/FRAM SINE Alu -3 299 226 2301 117 8 34 chr17 146924 146974 -89357579 - THE1C LTR MaLR 0 375 325 2225 99 14 0 chr17 146974 147267 -89357286 - AluSg SINE Alu -13 297 1 2301 117 8 34 chr17 147267 147601 -89356952 - THE1C LTR MaLR -50 325 1 2220 102 17 0 chr17 148064 148359 -89356194 - AluSx SINE Alu -12 300 1 691 205 40 145 chr17 148359 148656 -89355897 - MLT2D LTR ERVL -49 365 100 502 105 26 0 chr17 148656 148732 -89355821 + AluS SINE Alu 1 78 -235 2300 96 3 0 chr17 148889 149181 -89355372 + AluSx SINE Alu 1 293 -19 335 156 26 39 chr17 150161 150238 -89354315 - L1MC4 LINE L1 0 8042 7967 223 204 61 0 chr17 150591 150640 -89353913 - MER5A DNA MER1_type -133 56 5 1205 208 4 49 chr17 150698 150790 -89353763 - MER8 DNA MER2_type 0 239 144 1765 143 0 7 chr17 150790 151083 -89353470 + AluJo SINE Alu 1 291 -21 2188 100 10 0 chr17 151086 151385 -89353168 + AluY SINE Alu 1 302 -9 1205 208 4 49 chr17 151385 151533 -89353020 - MER8 DNA MER2_type -97 142 6 287 288 48 8 chr17 151533 151658 -89352895 - L1MC4 LINE L1 -156 7886 7757 * 2009 285 70 43 chr17 151651 152014 -89352539 - L1MC4 LINE L1 -319 7570 7218 1653 171 0 26 chr17 152014 152319 -89352234 - AluJo SINE Alu -15 297 1 2009 285 70 43 chr17 152319 152422 -89352131 - L1MC4 LINE L1 -671 7218 7119 1947 140 7 13 chr17 152422 152729 -89351824 + AluSx SINE Alu 1 305 -7 2009 285 70 43 chr17 152729 153118 -89351435 - L1MC4 LINE L1 -770 7119 6742 2015 132 0 0 chr17 153118 153414 -89351139 + AluSx SINE Alu 1 296 -16 2009 285 70 43 chr17 153414 153858 -89350695 - L1MC4 LINE L1 -1147 6742 6116 1306 156 0 0 chr17 153858 154070 -89350483 + AluSx SINE Alu 1 212 -100 430 121 0 0 chr17 154070 154128 -89350425 + AluSg/x SINE Alu 76 133 -176 1920 131 0 0 chr17 154128 154434 -89350119 + AluSx SINE Alu 1 306 0 2317 80 0 6 chr17 155793 156106 -89348447 - AluY SINE Alu 0 311 1 231 277 67 0 chr17 156114 156233 -89348320 + MER113 DNA MER1_type? 4 130 -391 869 165 0 0 chr17 156233 156366 -89348187 + FLAM_C SINE Alu 1 133 0 1390 115 5 10 chr17 156374 156582 -89347971 + AluJb SINE Alu 94 300 -12 680 278 0 6 chr17 156588 156764 -89347789 + MER113 DNA MER1_type? 296 470 -51 2222 107 3 0 chr17 156992 157301 -89347252 + AluSx SINE Alu 1 310 -2 800 250 38 0 chr17 157319 157503 -89347050 + MLT1A1 LTR MaLR 175 365 0 1368 173 4 15 chr17 157508 157768 -89346785 + MLT1A1-int LTR MaLR 2 258 -1477 2060 90 37 10 chr17 157768 158068 -89346485 + AluSx SINE Alu 1 308 -4 2204 83 10 0 chr17 158345 158635 -89345918 - AluSc SINE Alu -16 293 1 1647 161 3 10 chr17 159263 159554 -89344999 - AluJo SINE Alu -23 289 1 2241 98 0 0 chr17 159575 159871 -89344682 - AluSx SINE Alu -16 296 1 2360 59 0 23 chr17 159875 160181 -89344372 - AluY SINE Alu -12 299 1 327 275 56 112 chr17 160367 160528 -89344025 - L2 LINE L2 0 3313 3179 2140 88 7 3 chr17 160528 160824 -89343729 + AluSg SINE Alu 1 297 -13 327 275 56 112 chr17 160824 161000 -89343553 - L2 LINE L2 -134 3179 2995 1960 110 27 14 chr17 161086 161378 -89343175 - AluSx SINE Alu -16 296 1 1209 120 0 0 chr17 161403 161570 -89342983 + AluY SINE Alu 133 299 -12 264 237 34 0 chr17 161579 161638 -89342915 - MER5A DNA MER1_type -64 125 65 1232 186 8 27 chr17 162447 162710 -89341843 - AluJo SINE Alu -43 269 12 1981 136 3 3 chr17 162726 163100 -89341453 + AluSg SINE Alu 1 374 0 1806 96 3 108 chr17 163586 163921 -89340632 + AluSp SINE Alu 1 300 -13 2133 68 10 3 chr17 163977 164269 -89340284 - AluY SINE Alu -17 294 1 317 429 7 0 chr17 164293 164447 -89340106 - L2 LINE L2 -7 3265 3111 187 274 0 48 chr17 164486 164548 -89340005 + MIR SINE MIR 204 262 0 289 326 18 54 chr17 164962 165186 -89339367 - L2 LINE L2 -222 3050 2835 287 226 0 57 chr17 165194 165318 -89339235 + G-rich Low_complexity Low_complexity 3 119 0 294 270 180 0 chr17 166422 166533 -89338020 + MIR SINE MIR 12 142 -120 2221 93 3 6 chr17 166574 166887 -89337666 - AluSp SINE Alu -1 312 1 1026 126 0 0 chr17 166977 167128 -89337425 - FRAM SINE Alu -26 150 1 254 284 59 10 chr17 167360 167462 -89337091 + L2 LINE L2 3111 3217 -96 2434 65 0 3 chr17 167612 167918 -89336635 + AluSx SINE Alu 1 305 -7 1630 164 51 0 chr17 167997 168290 -89336263 - AluJb SINE Alu -4 308 1 224 309 62 10 chr17 168290 168387 -89336166 - L2 LINE L2 -219 3053 2952 216 320 40 10 chr17 168423 168523 -89336030 - L2 LINE L2 -219 3053 2951 409 238 79 0 chr17 168631 168732 -89335821 + MER20 DNA MER1_type 111 219 0 2094 109 0 16 chr17 168890 169202 -89335351 + AluSx SINE Alu 1 307 -5 873 166 43 21 chr17 170332 170519 -89334034 - AluJo SINE Alu -3 309 119 2468 60 0 0 chr17 170931 171233 -89333320 - AluY SINE Alu -9 302 1 1070 179 82 0 chr17 171322 171517 -89333036 + AluSg SINE Alu 1 211 -99 422 73 0 0 chr17 171517 171572 -89332981 + AluSg/x SINE Alu 76 130 -180 1573 118 114 0 chr17 171575 171820 -89332733 + AluSg SINE Alu 1 273 -37 342 170 0 0 chr17 171935 171988 -89332565 - Alu SINE Alu -16 286 234 351 270 42 112 chr17 172097 172338 -89332215 + L1ME1 LINE L1 5896 6119 -47 347 251 61 28 chr17 172338 172464 -89332089 + L1ME1 LINE L1 6046 6331 -3 2395 66 3 3 chr17 172482 172785 -89331768 + AluY SINE Alu 1 303 -8 1994 152 0 0 chr17 172793 173103 -89331450 + AluSx SINE Alu 1 310 -2 1305 96 5 24 chr17 173215 173423 -89331130 - AluSx SINE Alu -108 204 1 1906 128 7 0 chr17 175104 175400 -89329153 - AluSx SINE Alu -14 298 1 1547 84 13 4 chr17 175693 175920 -89328633 + AluY SINE Alu 1 229 -82 629 99 0 0 chr17 176021 176112 -89328441 - AluJ/FLAM SINE Alu -220 92 2 2328 64 7 3 chr17 176960 177257 -89327296 + AluY SINE Alu 1 298 -13 2302 56 3 30 chr17 177665 177970 -89326583 + AluY SINE Alu 1 297 -14 1642 115 13 102 chr17 178350 178703 -89325850 + AluSx SINE Alu 1 325 0 626 148 109 47 chr17 178703 178831 -89325722 + MER2 DNA MER2_type 3 138 -207 744 168 0 8 chr17 178840 178971 -89325582 - FLAM_C SINE Alu -3 130 1 182 269 191 28 chr17 178979 179120 -89325433 + L2 LINE L2 1506 1669 -1645 2215 94 3 0 chr17 179132 179430 -89325123 - AluSq SINE Alu -14 299 1 615 338 52 7 chr17 179647 179952 -89324601 + L2 LINE L2 2987 3305 -8 5233 66 8 0 chr17 180037 180690 -89323863 + L1PA8 LINE L1 5514 6171 -1 2065 90 7 0 chr17 180696 180973 -89323580 + AluSx SINE Alu 3 281 -31 251 311 82 7 chr17 180987 181122 -89323431 + L1ME LINE L1 5396 5540 -581 2009 96 50 0 chr17 183120 183400 -89321153 - AluSx SINE Alu -18 294 1 247 299 93 10 chr17 183607 183704 -89320849 + L2 LINE L2 3163 3267 -5 2145 104 0 10 chr17 184210 184517 -89320036 + AluSx SINE Alu 1 304 -8 3224 113 10 12 chr17 185703 186200 -89318353 + LTR10D LTR ERV1 1 496 -17 1985 108 40 0 chr17 186205 186501 -89318052 - AluSg1 SINE Alu 0 309 2 1867 103 10 61 chr17 186551 186862 -89317691 - AluSg SINE Alu -14 296 2 2324 100 0 0 chr17 187765 188075 -89316478 + AluSg SINE Alu 1 310 0 2148 92 0 3 chr17 189567 189991 -89314562 - AluSq SINE Alu 0 423 1 2063 106 3 0 chr17 190494 190786 -89313767 - AluSx SINE Alu -13 299 7 548 288 123 14 chr17 191454 191666 -89312887 - MIR SINE MIR -19 243 9 2300 64 7 0 chr17 192005 192301 -89312252 + AluY SINE Alu 1 298 -13 2196 110 7 0 chr17 192676 192985 -89311568 - AluSx SINE Alu -1 311 1 1716 129 50 4 chr17 192985 193265 -89311288 - AluJb SINE Alu -13 299 7 2308 84 0 10 chr17 193337 193647 -89310906 - AluSq SINE Alu -6 307 1 721 288 56 0 chr17 193650 193865 -89310688 - MIR SINE MIR -23 239 13 271 170 0 0 chr17 194151 194204 -89310349 - L1MB4 LINE L1 0 6180 6128 2229 90 3 3 chr17 194366 194678 -89309875 + AluSx SINE Alu 1 312 0 1549 181 4 0 chr17 195521 195798 -89308755 + AluJo SINE Alu 1 278 -34 252 0 0 0 chr17 195807 195835 -89308718 + (TAA)n Simple_repeat Simple_repeat 2 29 0 652 139 124 22 chr17 195837 195974 -89308579 + AluJb SINE Alu 131 281 -31 508 276 112 19 chr17 195997 196211 -89308342 - MIR SINE MIR -6 256 23 2135 111 7 0 chr17 197387 197685 -89306868 + AluSx SINE Alu 1 300 -12 2311 98 0 0 chr17 197685 197991 -89306562 + AluSx SINE Alu 1 306 -6 2437 59 0 3 chr17 198441 198747 -89305806 - AluY SINE Alu -6 305 1 702 49 0 0 chr17 198747 198829 -89305724 - AluY SINE Alu -167 144 63 1195 120 71 0 chr17 198829 199013 -89305540 - AluSx SINE Alu -115 197 1 1593 155 50 7 chr17 200843 201140 -89303413 - AluJo SINE Alu -2 310 1 230 261 0 155 chr17 201152 201294 -89303259 - MER5A DNA MER1_type -63 126 7 443 218 42 31 chr17 201401 201540 -89303013 + MER5B DNA MER1_type 56 178 0 2314 65 3 26 chr17 201741 202049 -89302504 + AluY SINE Alu 1 301 -10 2324 97 0 0 chr17 202671 202969 -89301584 - AluSx SINE Alu -14 298 1 2040 139 0 0 chr17 202973 203267 -89301286 - AluSx SINE Alu -18 294 1 567 194 0 10 chr17 203374 203477 -89301076 - FLAM_A SINE Alu -8 134 33 2251 105 7 0 chr17 203781 204086 -89300467 - AluSq SINE Alu -6 307 1 2404 72 0 7 chr17 204310 204617 -89299936 - AluY SINE Alu -6 305 1 322 251 61 28 chr17 204635 204761 -89299792 - L1ME1 LINE L1 -3 6331 6046 283 261 46 116 chr17 204761 205002 -89299551 - L1ME1 LINE L1 -47 6119 5896 2074 115 3 0 chr17 205701 205988 -89298565 + AluSx SINE Alu 1 288 -24 2364 57 3 3 chr17 206047 206343 -89298210 - AluY SINE Alu -15 296 1 330 272 48 0 chr17 206457 206560 -89297993 + MIR SINE MIR 100 207 -55 1953 121 0 7 chr17 206681 206970 -89297583 - AluJb SINE Alu -25 287 1 2333 76 3 3 chr17 207255 207559 -89296994 - AluY SINE Alu -7 304 1 27 0 0 0 chr17 207627 207654 -89296899 + AT_rich Low_complexity Low_complexity 1 27 0 391 310 187 0 chr17 207659 207814 -89296739 - MER5A DNA MER1_type -2 187 4 484 351 52 60 chr17 208162 208510 -89296043 - L2 LINE L2 0 3272 2928 2177 84 0 0 chr17 209800 210073 -89294480 + AluSq SINE Alu 6 278 -35 322 78 4 4 chr17 210073 210131 -89294422 - Alu SINE Alu -258 44 1 2200 113 0 3 chr17 210574 210885 -89293668 - AluSx SINE Alu -2 310 1 2145 99 3 7 chr17 210885 211177 -89293376 - AluSg SINE Alu -18 292 1 572 228 6 10 chr17 211803 212307 -89292246 + (CA)n Simple_repeat Simple_repeat 1 502 0 2542 46 0 0 chr17 212637 212941 -89291612 + AluY SINE Alu 1 304 -7 292 298 35 0 chr17 213689 213803 -89290750 + CT-rich Low_complexity Low_complexity 3 120 0 2204 96 3 6 chr17 213942 214254 -89290299 - AluSx SINE Alu -1 311 1 2205 105 0 7 chr17 216935 217239 -89287314 + AluSx SINE Alu 1 302 -10 2149 93 28 0 chr17 217321 217612 -89286941 + AluSx SINE Alu 1 299 -13 390 100 0 0 chr17 218951 219011 -89285542 + (TG)n Simple_repeat Simple_repeat 1 60 0 258 252 55 84 chr17 220008 220057 -89284496 - MIR SINE MIR -7 255 206 1890 89 0 4 chr17 220057 220326 -89284227 - AluSx SINE Alu 0 305 38 258 252 55 84 chr17 220326 220453 -89284100 - MIR SINE MIR -56 206 85 1306 82 0 0 chr17 221472 221643 -89282910 + AluSg/x SINE Alu 138 308 -4 189 0 0 0 chr17 222959 222980 -89281573 + (CACCC)n Simple_repeat Simple_repeat 3 23 0 1150 158 0 0 chr17 223607 223790 -89280763 + AluJo SINE Alu 112 294 -18 2386 66 10 3 chr17 224179 224482 -89280071 + AluSx SINE Alu 6 310 -2 2385 73 0 0 chr17 225789 226089 -89278464 - AluSx SINE Alu -12 300 1 1991 105 63 0 chr17 227654 227940 -89276613 - AluSx SINE Alu -8 304 1 2149 100 3 7 chr17 229311 229611 -89274942 - AluSg SINE Alu -11 299 1 753 171 8 0 chr17 229981 230110 -89274443 + FLAM_C SINE Alu 4 133 0 1172 37 0 0 chr17 231341 231475 -89273078 + AluY SINE Alu 1 134 -177 2102 70 49 7 chr17 231475 231761 -89272792 + AluY SINE Alu 1 298 -13 2213 46 49 7 chr17 232432 232717 -89271836 - AluY SINE Alu -14 297 1 304 68 0 0 chr17 232717 232761 -89271792 - Alu SINE Alu -259 44 1 * 344 94 16 16 chr17 232761 232805 -89271748 - AluS SINE Alu -259 44 1 188 330 198 0 chr17 234591 234697 -89269856 - L2 LINE L2 -1 3271 3145 296 339 36 49 chr17 235426 235650 -89268903 - L2 LINE L2 -462 2852 2632 844 169 0 0 chr17 236799 236929 -89267624 + FLAM_C SINE Alu 1 130 -13 524 276 113 23 chr17 236937 237158 -89267395 - MIR SINE MIR 0 262 22 805 157 0 50 chr17 237306 237446 -89267107 + FLAM_C SINE Alu 1 133 0 1668 156 10 30 chr17 237475 237777 -89266776 - AluJb SINE Alu -16 296 1 2244 120 0 0 chr17 238075 238383 -89266170 + AluSx SINE Alu 1 308 -4 473 309 100 60 chr17 238454 238661 -89265892 - L1ME4a LINE L1 -117 6004 5807 2089 99 0 33 chr17 238661 238963 -89265590 - AluSq SINE Alu -21 292 1 473 309 100 60 chr17 238963 239215 -89265338 - L1ME4a LINE L1 -314 5807 5567 2063 101 14 14 chr17 239215 239349 -89265204 + AluSg SINE Alu 1 134 -174 2268 94 0 7 chr17 239349 239656 -89264897 + AluY SINE Alu 1 305 -6 2063 101 14 14 chr17 239656 239829 -89264724 + AluSg SINE Alu 133 308 0 473 309 100 60 chr17 239829 240049 -89264504 - L1ME4a LINE L1 -554 5567 5308 22 35 0 0 chr17 240490 240519 -89264034 + AT_rich Low_complexity Low_complexity 1 29 0 2066 100 28 0 chr17 242287 242576 -89261977 + AluSx SINE Alu 1 297 -15 901 37 0 0 chr17 242936 243044 -89261509 + AluSq/x SINE Alu 1 108 -205 241 250 0 0 chr17 244022 244070 -89260483 - L2 LINE L2 -95 3218 3171 182 361 36 12 chr17 244301 244384 -89260169 - L2 LINE L2 -1165 2149 2065 2252 97 0 3 chr17 244708 245007 -89259546 + AluSx SINE Alu 6 303 -9 1684 63 5 14 chr17 245159 245380 -89259173 - AluY SINE Alu -8 303 85 231 312 9 28 chr17 245570 245679 -89258874 - L2 LINE L2 -507 2807 2701 2500 51 0 10 chr17 245726 246040 -89258513 - AluY SINE Alu 0 311 1 242 282 107 34 chr17 246152 246270 -89258283 - MIR SINE MIR -32 176 46 2110 110 0 27 chr17 246270 246571 -89257982 - AluSq SINE Alu -16 297 5 2118 127 3 6 chr17 246576 246890 -89257663 - AluSq SINE Alu 0 313 1 1273 255 56 32 chr17 247510 247922 -89256631 - MER21B LTR ERV1 -113 750 329 513 221 79 0 chr17 247949 248089 -89256464 - MER21B LTR ERV1 -615 248 98 364 209 70 0 chr17 248130 248216 -89256337 - MER21B LTR ERV1 -767 96 5 2048 129 0 0 chr17 248268 248563 -89255990 - AluSx SINE Alu -17 295 1 843 260 86 33 chr17 249106 249569 -89254984 - L2 LINE L2 -239 3074 2587 433 291 137 21 chr17 250371 250612 -89253941 - MLT1L LTR MaLR -8 607 339 961 144 58 0 chr17 250641 250814 -89253739 - AluSg/x SINE Alu -9 301 119 2159 105 0 3 chr17 250840 251136 -89253417 - AluSx SINE Alu -17 295 1 424 247 153 13 chr17 251148 251298 -89253255 - MLT1L LTR MaLR -326 289 119 333 215 14 97 chr17 252380 252524 -89252029 - L1ME4a LINE L1 -63 6058 5927 355 320 89 50 chr17 252558 252912 -89251641 - L1ME4a LINE L1 -353 5768 5388 2480 44 0 0 chr17 252912 253209 -89251344 - AluY SINE Alu -14 297 1 355 320 89 50 chr17 253209 253339 -89251214 - L1ME4a LINE L1 -733 5388 5265 662 318 68 85 chr17 253347 253707 -89250846 - L1ME4a LINE L1 -896 5250 4900 1586 210 6 16 chr17 253707 253883 -89250670 - AluJb SINE Alu -1 311 138 2282 95 0 25 chr17 253883 254200 -89250353 - AluSq SINE Alu -4 309 1 1586 210 6 16 chr17 254200 254337 -89250216 - AluJb SINE Alu -174 138 1 662 318 68 85 chr17 254337 254491 -89250062 - L1ME4a LINE L1 -1246 4900 4745 790 261 77 26 chr17 254914 255225 -89249328 + L1MC4a LINE L1 5607 5933 -1875 314 326 27 34 chr17 255247 255394 -89249159 + L1ME4a LINE L1 5974 6119 -2 344 307 51 7 chr17 256797 256934 -89247619 + L2 LINE L2 1596 1738 -1576 293 219 27 14 chr17 258666 258739 -89245814 + L2 LINE L2 3239 3312 -1 333 291 131 23 chr17 258755 258930 -89245623 + MIR SINE MIR 59 252 -10 21 0 0 0 chr17 259039 259060 -89245493 + AT_rich Low_complexity Low_complexity 1 21 0 1971 139 3 0 chr17 259070 259357 -89245196 - AluSx SINE Alu -24 288 1 2296 97 0 0 chr17 259359 259659 -89244894 - AluSx SINE Alu -10 302 3 1786 158 0 3 chr17 259664 259948 -89244605 - AluJb SINE Alu -17 295 13 2173 89 3 26 chr17 260004 260307 -89244246 - AluSx SINE Alu -16 296 1 229 94 0 0 chr17 260643 260675 -89243878 + Alu SINE Alu 6 37 -263 1306 82 0 0 chr17 261850 262021 -89242532 + AluSg/x SINE Alu 136 306 -4 189 0 0 0 chr17 263335 263356 -89241197 + (CACCC)n Simple_repeat Simple_repeat 3 23 0 1134 164 0 0 chr17 263982 264165 -89240388 + AluJo SINE Alu 112 294 -18 2312 76 10 3 chr17 264555 264857 -89239696 + AluSx SINE Alu 9 312 0 1806 243 98 51 chr17 265206 265784 -89238769 - L1ME2 LINE L1 -10 6154 5528 1426 167 93 0 chr17 265784 266054 -89238499 + AluJb SINE Alu 1 295 -17 1806 243 98 51 chr17 266054 266257 -89238296 - L1ME2 LINE L1 -636 5528 5336 2282 95 10 0 chr17 267721 268026 -89236527 + AluSx SINE Alu 1 308 -4 2291 84 3 0 chr17 268128 268424 -89236129 - AluSq SINE Alu -16 297 1 2092 98 0 0 chr17 269248 269522 -89235031 - AluSq SINE Alu -39 274 1 236 320 20 68 chr17 269911 270161 -89234392 + L2 LINE L2 2817 3054 -218 188 274 0 48 chr17 270570 270632 -89233921 - MIR SINE MIR 0 262 204 334 429 7 0 chr17 270671 270825 -89233728 + L2 LINE L2 3111 3265 -7 1488 64 5 0 chr17 270849 271037 -89233516 + AluY SINE Alu 1 189 -122 204 320 190 34 chr17 272903 273172 -89231381 + L2 LINE L2 2932 3242 -30 347 288 129 71 chr17 274250 274829 -89229724 + L1M2 LINE L1 757 1369 -5480 303 313 98 0 chr17 276038 276150 -89228403 + MIR SINE MIR 52 174 -88 2024 131 0 3 chr17 276705 277002 -89227551 + AluSx SINE Alu 1 296 -16 201 224 0 0 chr17 278170 278219 -89226334 - MIR SINE MIR -79 129 81 209 281 226 7 chr17 281681 281827 -89222726 - L2 LINE L2 -4 3268 3091 2204 134 0 0 chr17 282006 282313 -89222240 + AluSx SINE Alu 1 307 -5 794 105 48 32 chr17 282949 283073 -89221480 + FLAM_C SINE Alu 1 126 -17 1602 166 32 3 chr17 283089 283372 -89221181 + AluJo SINE Alu 1 291 -21 2211 81 10 3 chr17 283572 283868 -89220685 + AluY SINE Alu 1 298 -13 1987 119 0 32 chr17 283887 284197 -89220356 + AluSx SINE Alu 1 300 -12 412 305 26 26 chr17 289142 289293 -89215260 - MIR3 SINE MIR -55 153 3 257 268 0 0 chr17 289702 289758 -89214795 + C-rich Low_complexity Low_complexity 4 59 0 1858 147 0 10 chr17 289894 290193 -89214360 + AluJb SINE Alu 4 299 -13 721 283 91 8 chr17 291280 291641 -89212912 - MER90 LTR ERV1 -63 551 161 214 371 0 0 chr17 291805 291867 -89212686 + L2 LINE L2 3242 3303 -10 2123 95 3 14 chr17 291867 292162 -89212391 + AluSx SINE Alu 1 292 -20 319 234 36 36 chr17 292408 292519 -89212034 - MER103 DNA DNA -46 120 10 503 243 40 7 chr17 293572 293724 -89210829 + L1ME4a LINE L1 5961 6117 -4 1408 120 9 40 chr17 294919 295144 -89209409 + AluSg/x SINE Alu 93 310 0 2093 122 3 0 chr17 296071 296367 -89208186 - AluSx SINE Alu -11 301 5 2074 97 0 27 chr17 296371 296669 -89207884 - AluSx SINE Alu -22 290 1 1815 189 20 40 chr17 296703 297057 -89207496 + MER7A DNA MER2_type 2 346 0 563 165 0 10 chr17 297280 297377 -89207176 + AluS SINE Alu 1 96 -216 458 20 0 0 chr17 297502 297552 -89207001 + AluY SINE Alu 66 115 -196 * 645 83 0 0 chr17 297549 297633 -89206920 - AluS SINE Alu -229 84 1 1774 206 107 52 chr17 297910 298144 -89206409 - L1ME2 LINE L1 -59 6105 5885 2504 55 3 0 chr17 298144 298454 -89206099 - AluY SINE Alu 0 311 1 1774 206 107 52 chr17 298454 298855 -89205698 - L1ME2 LINE L1 -279 5885 5435 613 188 167 7 chr17 298861 299005 -89205548 - AluJo SINE Alu -109 203 37 520 150 37 1 chr17 299006 299133 -89205420 - L1M1 LINE L1 -732 5430 5299 350 292 11 0 chr17 299265 299354 -89205199 - L1ME2 LINE L1 -957 5189 5100 548 138 0 11 chr17 299474 299568 -89204985 + LTR23 LTR ERV1 313 405 -32 22 35 0 0 chr17 299575 299604 -89204949 + AT_rich Low_complexity Low_complexity 1 29 0 2159 112 0 40 chr17 299632 299955 -89204598 - AluSx SINE Alu -2 310 1 302 261 56 99 chr17 299956 299981 -89204572 - MIR SINE MIR -49 213 188 2617 33 0 23 chr17 299981 300286 -89204267 - AluY SINE Alu -13 298 1 302 261 56 99 chr17 300286 300421 -89204132 - MIR SINE MIR -74 188 60 2225 112 3 0 chr17 301377 301673 -89202880 + AluSq SINE Alu 1 297 -16 545 204 18 0 chr17 302260 302373 -89202180 - FLAM_A SINE Alu -18 115 1 21 36 0 0 chr17 302767 302795 -89201758 + AT_rich Low_complexity Low_complexity 1 28 0 2326 78 41 0 chr17 304233 304528 -89200025 - AluSp SINE Alu -2 311 5 2011 93 7 7 chr17 304986 305256 -89199297 - AluSp SINE Alu 0 313 44 23 0 0 0 chr17 305380 305403 -89199150 + AT_rich Low_complexity Low_complexity 1 23 0 2188 102 7 0 chr17 305403 305697 -89198856 + AluSp SINE Alu 1 296 -17 962 196 38 14 chr17 305820 306029 -89198524 - AluJb SINE Alu -13 299 86 615 231 98 47 chr17 306546 306684 -89197869 - MER4C LTR ERV1 0 687 557 3619 67 34 0 chr17 306684 307180 -89197373 + LTR10D LTR ERV1 1 513 0 615 231 98 47 chr17 307180 307368 -89197185 - MER4C LTR ERV1 -130 557 177 341 200 100 0 chr17 307373 307453 -89197100 - MER4C LTR ERV1 -201 264 177 257 224 158 0 chr17 307458 307534 -89197019 - MER4C LTR ERV1 -201 264 177 341 200 100 0 chr17 307539 307619 -89196934 - MER4C LTR ERV1 -201 264 177 308 225 100 0 chr17 307624 307704 -89196849 - MER4C LTR ERV1 -201 264 177 327 213 100 0 chr17 307709 307789 -89196764 - MER4C LTR ERV1 -201 264 177 284 179 167 0 chr17 307794 307872 -89196681 - MER4C LTR ERV1 -201 264 174 * 654 152 54 121 chr17 307848 308193 -89196360 - MER4C LTR ERV1 -283 381 1 198 230 23 126 chr17 311396 311483 -89193070 + MIR SINE MIR 79 156 -106 488 291 105 0 chr17 311864 312036 -89192517 + MIR SINE MIR 59 248 -14 181 279 81 62 chr17 312858 312973 -89191580 - MIR SINE MIR -50 212 92 612 196 8 45 chr17 312973 313106 -89191447 - FLAM_A SINE Alu -5 128 1 181 279 81 62 chr17 313106 313151 -89191402 - MIR SINE MIR -170 92 49 274 309 204 25 chr17 314613 314976 -89189577 + L2 LINE L2 2046 2473 -841 519 178 11 0 chr17 318999 319089 -89185464 - FLAM_A SINE Alu -41 101 11 1731 143 66 21 chr17 319288 319575 -89184978 + AluJb SINE Alu 1 300 -12 783 134 15 22 chr17 319584 319718 -89184835 + FLAM_C SINE Alu 1 133 0 1760 124 0 0 chr17 323107 323349 -89181204 - AluSq SINE Alu -2 311 70 239 125 0 0 chr17 323349 323389 -89181164 - Alu SINE Alu -135 168 129 187 264 126 35 chr17 323413 323500 -89181053 + MIR SINE MIR 57 151 -111 824 100 0 50 chr17 323544 323684 -89180869 + FLAM_C SINE Alu 1 133 0 2109 98 35 41 chr17 323693 324008 -89180545 + AluSq SINE Alu 1 313 0 1881 153 21 0 chr17 324315 324603 -89179950 + AluJb SINE Alu 1 294 -18 2416 84 7 0 chr17 324786 325085 -89179468 + AluSx SINE Alu 1 301 -11 215 262 0 117 chr17 325420 325523 -89179030 - MIR SINE MIR -107 155 65 2494 87 0 10 chr17 325870 326181 -89178372 + AluSx SINE Alu 1 308 -4 2312 120 0 0 chr17 326228 326537 -89178016 + AluSg SINE Alu 1 309 -1 305 183 211 29 chr17 326875 326979 -89177574 - MER5A DNA MER1_type -3 186 64 2139 105 3 43 chr17 327175 327499 -89177054 - AluSx SINE Alu -1 311 1 2185 106 39 0 chr17 327870 328153 -89176400 + AluSx SINE Alu 1 294 -18 667 161 24 0 chr17 328200 328324 -89176229 + FLAM_C SINE Alu 1 127 -6 1531 174 68 20 chr17 328568 328861 -89175692 + AluJo SINE Alu 1 307 -5 879 144 0 0 chr17 328864 328996 -89175557 + FLAM_C SINE Alu 2 133 0 25 0 0 0 chr17 330585 330610 -89173943 + GC_rich Low_complexity Low_complexity 1 25 0 186 174 0 0 chr17 330777 330823 -89173730 + G-rich Low_complexity Low_complexity 4 49 0 2131 83 4 0 chr17 331385 331679 -89172874 + AluSx SINE Alu 20 314 0 322 170 50 70 chr17 331972 332072 -89172481 + MIR3 SINE MIR 110 207 -1 2625 64 0 0 chr17 332808 333119 -89171434 + AluY SINE Alu 1 311 0 227 280 153 8 chr17 333380 333498 -89171055 + L2 LINE L2 3164 3298 -15 465 286 127 18 chr17 333515 333610 -89170943 - MIR SINE MIR -11 251 168 264 30 0 0 chr17 333610 333643 -89170910 + (TG)n Simple_repeat Simple_repeat 2 34 0 465 286 127 18 chr17 333643 333767 -89170786 - MIR SINE MIR -94 168 8 350 264 19 38 chr17 333928 334034 -89170519 - MIR SINE MIR -46 216 113 1483 186 3 39 chr17 334657 334963 -89169590 + AluJb SINE Alu 3 297 -15 576 216 78 39 chr17 335135 335367 -89169186 + AluJo SINE Alu 5 245 -67 303 26 0 0 chr17 335367 335405 -89169148 + AluJ/FLAM SINE Alu 39 76 -226 532 234 65 50 chr17 335405 335606 -89168947 + AluJb SINE Alu 11 214 -98 461 103 0 0 chr17 335603 335671 -89168882 + AluJ/FLAM SINE Alu 11 78 -234 * 1753 146 38 0 chr17 335671 335932 -89168621 + AluJb SINE Alu 13 283 -29 423 0 0 0 chr17 335932 335979 -89168574 + (CA)n Simple_repeat Simple_repeat 2 48 0 336 293 115 16 chr17 336368 336559 -89167994 + MIR SINE MIR 21 230 -32 1334 200 35 24 chr17 337013 337303 -89167250 + AluJb SINE Alu 1 293 -19 608 152 9 0 chr17 337318 337423 -89167130 - FLAM_C SINE Alu -37 106 1 2330 57 0 4 chr17 337506 337786 -89166767 + AluY SINE Alu 31 309 -2 1641 164 43 4 chr17 337879 338159 -89166394 + AluJo SINE Alu 1 291 -21 328 93 0 0 chr17 338281 338324 -89166229 + Alu SINE Alu 1 43 -258 1501 71 6 0 chr17 338324 338506 -89166047 + AluSg/x SINE Alu 125 307 -5 243 0 0 0 chr17 338506 338533 -89166020 + (TA)n Simple_repeat Simple_repeat 1 27 0 368 239 28 9 chr17 338534 338594 -89165959 + L1ME LINE L1 5708 5772 -349 2362 110 0 0 chr17 338594 338902 -89165651 + AluSx SINE Alu 1 308 -4 368 239 28 9 chr17 338902 338950 -89165603 + L1ME LINE L1 5772 5818 -303 906 136 155 7 chr17 338954 339109 -89165444 + FRAM SINE Alu 1 172 -4 827 103 0 9 chr17 339134 339241 -89165312 - AluSg/x SINE Alu -129 181 76 1526 120 0 5 chr17 339241 339450 -89165103 - AluSx SINE Alu -100 212 5 1234 178 54 25 chr17 339469 339711 -89164842 - AluJo SINE Alu -25 287 39 2272 73 16 36 chr17 339761 340064 -89164489 - AluSg SINE Alu -13 297 1 536 15 0 0 chr17 340306 340394 -89164159 + AluY SINE Alu 217 304 0 2483 62 3 0 chr17 340404 340696 -89163857 + AluY SINE Alu 1 293 -18 203 0 37 0 chr17 340696 340723 -89163830 + (TA)n Simple_repeat Simple_repeat 2 29 0 412 186 17 68 chr17 341571 341689 -89162864 + MER20B DNA MER1_type 31 142 -641 1162 140 0 0 chr17 342875 343039 -89161514 - AluSg/x SINE Alu -15 295 132 369 0 0 0 chr17 343044 343085 -89161468 + (TATG)n Simple_repeat Simple_repeat 2 42 0 2128 109 3 32 chr17 343085 343390 -89161163 - AluSx SINE Alu -16 296 1 360 298 111 65 chr17 344139 344240 -89160313 + L2 LINE L2 2927 3022 -291 2509 89 0 0 chr17 344240 344553 -89160000 + AluSp SINE Alu 1 313 0 360 298 111 65 chr17 344553 344820 -89159733 + L2 LINE L2 3022 3312 -1 463 270 20 77 chr17 344833 345029 -89159524 + MIR SINE MIR 78 262 0 2737 163 62 23 chr17 345053 345492 -89159061 + L1ME1 LINE L1 5510 5977 -189 2481 91 0 0 chr17 345492 345799 -89158754 + AluSx SINE Alu 1 307 -5 2737 163 62 23 chr17 345799 345922 -89158631 + L1ME1 LINE L1 5977 6094 -72 1491 127 138 15 chr17 345949 346217 -89158336 - AluSx SINE Alu -1 301 1 240 236 69 0 chr17 346220 346292 -89158261 + L1ME1 LINE L1 6082 6158 -8 325 242 109 70 chr17 346490 346618 -89157935 - L1ME4a LINE L1 -195 5926 5794 633 72 0 52 chr17 346628 346725 -89157828 - FRAM SINE Alu -30 146 55 339 178 41 14 chr17 346776 346849 -89157704 - AluSc SINE Alu -105 194 120 22 70 0 0 chr17 346917 346960 -89157593 + AT_rich Low_complexity Low_complexity 1 43 0 2607 49 7 0 chr17 347395 347699 -89156854 + AluSg SINE Alu 1 306 -4 2339 81 0 16 chr17 348986 349293 -89155260 - AluSx SINE Alu -10 302 1 2395 97 3 0 chr17 349370 349680 -89154873 - AluSx SINE Alu -1 311 1 1093 99 0 7 chr17 349838 349979 -89154574 - FRAM SINE Alu -19 157 18 481 146 0 0 chr17 350247 350329 -89154224 - L1PB3 LINE L1 0 6154 6073 2161 100 3 3 chr17 350572 350873 -89153680 + AluSg SINE Alu 1 301 -9 2199 97 0 0 chr17 350935 351233 -89153320 + AluY SINE Alu 1 298 -13 1266 162 22 13 chr17 351836 352064 -89152489 - AluJb SINE Alu -25 287 58 198 0 0 0 chr17 352077 352099 -89152454 + (TTAA)n Simple_repeat Simple_repeat 3 24 0 1644 100 151 12 chr17 352102 352353 -89152200 - AluSx SINE Alu -16 286 1 251 159 48 0 chr17 352354 352417 -89152136 - L1MA8 LINE L1 -1 6290 6225 2068 120 7 0 chr17 352878 353186 -89151367 - AluSq SINE Alu -3 310 1 382 265 38 30 chr17 353355 353487 -89151066 - L2 LINE L2 0 3272 3140 335 296 45 56 chr17 353613 353792 -89150761 - L2 LINE L2 0 3313 3137 362 323 0 23 chr17 353918 354048 -89150505 - L2 LINE L2 -245 3068 2942 4483 155 78 35 chr17 354081 354995 -89149558 + LTR13 LTR ERVK 2 954 0 1614 182 23 10 chr17 355175 355483 -89149070 - AluJo SINE Alu 0 312 1 2310 85 7 0 chr17 355505 355810 -89148743 - AluSq SINE Alu -6 307 1 245 310 9 35 chr17 355907 356023 -89148530 - Charlie7 DNA MER1_type -2499 113 1 266 290 154 43 chr17 356033 356312 -89148241 - L2 LINE L2 -557 2757 2448 223 259 52 0 chr17 356369 356427 -89148126 - L2 LINE L2 -61 3211 3151 2233 101 0 0 chr17 356496 356793 -89147760 - AluSc SINE Alu -12 297 1 22 0 0 0 chr17 356803 356825 -89147728 + AT_rich Low_complexity Low_complexity 1 22 0 1508 157 0 88 chr17 357137 357307 -89147246 - AluJo SINE Alu -21 291 160 1905 122 0 17 chr17 357307 357595 -89146958 - AluSc SINE Alu -26 283 1 1508 157 0 88 chr17 357595 357743 -89146810 - AluJo SINE Alu -152 160 1 332 73 0 0 chr17 359089 359130 -89145423 + Alu SINE Alu 23 63 -240 812 134 0 0 chr17 359130 359249 -89145304 + AluJb SINE Alu 182 300 -12 1608 183 0 10 chr17 359831 360126 -89144427 - AluSx SINE Alu -20 292 1 2177 93 6 13 chr17 360355 360666 -89143887 - AluSg SINE Alu -1 309 1 649 258 27 5 chr17 360674 360860 -89143693 - AluJo SINE Alu -3 309 120 1574 125 29 96 chr17 361777 362090 -89142463 - AluJo SINE Alu -19 293 2 1715 177 0 6 chr17 362118 362429 -89142124 + AluSx SINE Alu 1 309 -3 2081 148 118 0 chr17 362453 362817 -89141736 - MSTA LTR MaLR -21 407 1 375 161 0 0 chr17 362978 363034 -89141519 + AluS SINE Alu 2 57 -244 6375 50 16 32 chr17 363388 364264 -89140289 - SVA Other Other 0 1386 525 472 267 0 0 chr17 365050 365155 -89139398 - MIR SINE MIR -60 148 44 541 206 41 0 chr17 366299 366396 -89138157 - Tigger3(Golem) DNA MER2_type 0 3029 2929 1661 118 103 79 chr17 366399 366728 -89137825 - MER1B DNA MER1_type 0 337 1 367 218 26 0 chr17 366745 366823 -89137730 - Tigger3(Golem) DNA MER2_type -2949 80 1 396 283 153 17 chr17 366888 367065 -89137488 - MIR SINE MIR -53 209 9 927 259 59 96 chr17 367072 367562 -89136991 + L2 LINE L2 2399 2870 -444 256 318 110 9 chr17 367881 368198 -89136355 + L2 LINE L2 2887 3307 -6 345 300 135 42 chr17 368206 368466 -89136087 + L2 LINE L2 2939 3222 -50 1169 171 0 0 chr17 368601 368788 -89135765 + AluJo SINE Alu 1 187 -125 2067 112 10 0 chr17 371907 372210 -89132343 - AluSx SINE Alu -6 306 1 259 315 136 0 chr17 372631 372759 -89131794 - MIR SINE MIR -58 150 38 508 271 91 89 chr17 372963 373324 -89131229 - L2 LINE L2 -1 3271 2910 803 159 0 0 chr17 373837 373963 -89130590 - FLAM_C SINE Alu -16 127 2 2143 188 124 8 chr17 373965 374507 -89130046 - L1MC4a LINE L1 -289 7519 6940 1491 172 39 26 chr17 374513 374821 -89129732 + AluJb SINE Alu 1 312 0 1136 122 13 258 chr17 377195 377738 -89126815 + L1MC4 LINE L1 7491 7900 -142 1112 165 37 0 chr17 377743 377931 -89126622 + AluJb SINE Alu 1 195 -117 291 93 0 0 chr17 377931 377974 -89126579 + (GGGGA)n Simple_repeat Simple_repeat 1 43 0 242 172 52 0 chr17 377974 378032 -89126521 + A-rich Low_complexity Low_complexity 5 65 0 467 203 0 3 chr17 378070 378165 -89126388 + L1MC4 LINE L1 7889 8040 -2 408 40 0 0 chr17 378175 378225 -89126328 + (TCTCCC)n Simple_repeat Simple_repeat 6 55 0 287 149 0 0 chr17 378347 378394 -89126159 - AluSp SINE Alu -128 175 129 * 363 137 0 0 chr17 378393 378444 -89126109 - AluSp SINE Alu -124 179 129 262 128 85 0 chr17 378443 378490 -89126063 - AluJ/F(R)AM SINE Alu -123 179 129 * 293 200 20 0 chr17 378489 378539 -89126014 - AluSc SINE Alu -122 177 127 * 354 137 0 0 chr17 378538 378589 -89125964 - AluSc SINE Alu -122 177 127 251 149 85 0 chr17 378588 378635 -89125918 - AluYb8 SINE Alu -130 178 128 * 267 200 20 0 chr17 378634 378684 -89125869 - AluJ/F(R)AM SINE Alu -123 179 129 * 316 62 83 0 chr17 378683 378731 -89125822 - AluY SINE Alu -123 178 127 279 89 89 0 chr17 378731 378776 -89125777 - AluY SINE Alu -125 176 128 * 304 160 20 0 chr17 378775 378825 -89125728 - AluJ/F(R)AM SINE Alu -123 179 129 * 367 98 0 0 chr17 378824 378875 -89125678 - AluSc SINE Alu -122 177 127 * 388 98 0 0 chr17 378874 378925 -89125628 - AluJ/F(R)AM SINE Alu -123 179 129 341 120 20 0 chr17 378924 378974 -89125579 - AluJ/F(R)AM SINE Alu -123 179 129 * 276 106 85 0 chr17 378973 379020 -89125533 - AluYa5 SINE Alu -123 178 128 * 273 106 85 0 chr17 379019 379066 -89125487 - AluY SINE Alu -123 178 128 * 279 200 20 0 chr17 379065 379115 -89125438 - AluJ/F(R)AM SINE Alu -123 179 129 * 371 98 0 0 chr17 379114 379165 -89125388 - AluJ/F(R)AM SINE Alu -123 179 129 371 209 13 50 chr17 379164 379364 -89125189 - AluJ/F(R)AM SINE Alu -123 179 129 356 118 0 0 chr17 379363 379414 -89125139 - AluSp SINE Alu -124 179 129 * 360 118 0 0 chr17 379413 379464 -89125089 - AluJ/F(R)AM SINE Alu -123 179 129 360 118 0 0 chr17 379463 379514 -89125039 - AluSc SINE Alu -122 177 127 329 143 0 0 chr17 379514 379563 -89124990 - AluSc SINE Alu -123 176 128 371 98 0 0 chr17 379563 379614 -89124939 - AluSc SINE Alu -122 177 127 346 102 0 0 chr17 379614 379663 -89124890 - AluSc SINE Alu -123 176 128 371 98 0 0 chr17 379663 379714 -89124839 - AluJ/F(R)AM SINE Alu -123 179 129 340 118 0 0 chr17 379713 379764 -89124789 - AluJ/F(R)AM SINE Alu -123 179 129 * 358 98 0 0 chr17 379763 379814 -89124739 - AluSc SINE Alu -122 177 127 548 93 0 0 chr17 380495 380570 -89123983 - Alu SINE Alu -9 300 226 956 158 0 6 chr17 380571 380729 -89123824 - AluSq SINE Alu -156 157 1 326 109 0 0 chr17 381034 381080 -89123473 - Alu SINE Alu -256 46 1 360 299 55 44 chr17 381093 381367 -89123186 - L1ME LINE L1 -302 5819 5543 330 257 50 7 chr17 381447 381587 -89122966 - L1ME LINE L1 -755 5391 5246 2181 97 3 10 chr17 381755 382065 -89122488 + AluSx SINE Alu 5 312 0 200 128 64 21 chr17 382271 382318 -89122235 + CT-rich Low_complexity Low_complexity 4 52 0 1372 107 62 9 chr17 382586 382810 -89121743 - AluJo SINE Alu -76 236 1 554 170 21 0 chr17 383708 383802 -89120751 + AluSg/x SINE Alu 208 303 -6 324 287 156 6 chr17 386723 386890 -89117663 - L1ME4a LINE L1 0 6121 5930 1418 242 53 37 chr17 386908 387395 -89117158 - L1MB7 LINE L1 -19 6165 5671 1429 208 40 9 chr17 389194 389516 -89115037 - L1ME4a LINE L1 -466 5718 5387 1716 72 0 0 chr17 389532 389753 -89114800 + AluSq SINE Alu 1 221 -92 7574 39 2 0 chr17 389886 391244 -89113309 - L1PA4 LINE L1 -1 6154 4795 26867 31 4 7 chr17 391244 394489 -89110064 + L1PA4 LINE L1 1575 4810 -1336 287 247 65 0 chr17 394502 394579 -89109974 - HsTC2 DNA Tc2 -546 1352 1271 712 258 117 11 chr17 394586 394869 -89109684 - L1MC4 LINE L1 0 8042 7730 25 83 0 0 chr17 395107 395167 -89109386 + AT_rich Low_complexity Low_complexity 1 60 0 25 0 0 0 chr17 395731 395756 -89108797 + AT_rich Low_complexity Low_complexity 1 25 0 763 212 0 91 chr17 395831 395858 -89108695 + L1MA10 LINE L1 6124 6152 -182 1979 118 3 7 chr17 395858 396169 -89108384 - AluSg SINE Alu 0 310 2 763 212 0 91 chr17 396169 396372 -89108181 + L1MA10 LINE L1 6152 6333 -1 227 195 0 0 chr17 396708 396749 -89107804 + (TCTG)n Simple_repeat Simple_repeat 1 41 0 1817 170 0 0 chr17 396843 397143 -89107410 + AluSx SINE Alu 1 300 -12 286 267 61 30 chr17 397337 397468 -89107085 + MIR SINE MIR 77 211 -51 1652 28 0 42 chr17 398296 398508 -89106045 + L1PA3 LINE L1 5953 6155 0 404 254 60 0 chr17 400109 400243 -89104310 + L1MD2 LINE L1 6206 6347 -12 798 168 32 32 chr17 400244 400434 -89104119 + HsTC2 DNA Tc2 1605 1794 -104 1881 103 3 88 chr17 401655 401975 -89102578 - AluSx SINE Alu -19 293 1 9672 31 14 154 chr17 402055 403656 -89100897 + SVA Other Other 7 1383 -3 200 241 148 111 chr17 404203 404419 -89100134 - MIR SINE MIR -37 225 2 1757 172 7 0 chr17 405096 405399 -89099154 + AluJb SINE Alu 1 305 -7 1909 134 0 19 chr17 407762 408076 -89096477 - AluSx SINE Alu -4 308 1 1668 168 7 10 chr17 408076 408372 -89096181 - AluJb SINE Alu -17 295 1 25 51 0 0 chr17 408415 408454 -89096099 + AT_rich Low_complexity Low_complexity 1 39 0 350 171 66 0 chr17 408481 408557 -89095996 - L1MB8 LINE L1 -2 6176 6096 2657 181 18 30 chr17 408577 409146 -89095407 - L1MB4 LINE L1 -12 6168 5607 2103 94 23 3 chr17 410420 410719 -89093834 - AluSx SINE Alu -7 305 1 339 273 104 50 chr17 411209 411437 -89093116 - MIR SINE MIR -19 243 23 2414 68 0 0 chr17 413069 413380 -89091173 - AluY SINE Alu 0 311 1 226 228 140 0 chr17 413487 413544 -89091009 + L2 LINE L2 3207 3271 -1 374 159 29 14 chr17 413815 413884 -89090669 - MLT1K LTR MaLR -8 580 511 333 0 0 0 chr17 413998 414035 -89090518 + (GA)n Simple_repeat Simple_repeat 2 38 0 387 0 0 0 chr17 414058 414101 -89090452 + (TG)n Simple_repeat Simple_repeat 2 44 0 1887 100 59 0 chr17 414234 414504 -89090049 + AluSc SINE Alu 11 296 -13 305 305 104 19 chr17 414645 414799 -89089754 - MIR SINE MIR -79 183 17 345 130 40 30 chr17 414831 414931 -89089622 + CT-rich Low_complexity Low_complexity 2 102 0 1912 143 13 0 chr17 414954 415262 -89089291 - AluSx SINE Alu 0 312 1 2286 96 0 0 chr17 416296 416599 -89087954 - AluSc SINE Alu -6 303 1 1702 163 10 10 chr17 416602 416896 -89087657 - AluSx SINE Alu -14 298 5 253 188 125 0 chr17 417931 417995 -89086558 + MER94 DNA DNA 4 75 -59 2204 119 6 26 chr17 418141 418485 -89086068 - MER1B DNA MER1_type 0 337 1 249 260 185 17 chr17 418741 418914 -89085639 + L2 LINE L2 1597 1798 -1516 867 198 8 118 chr17 418916 419153 -89085400 - MER58A DNA MER1_type -3 221 11 1068 282 72 32 chr17 419177 419281 -89085272 + L2 LINE L2 1839 1937 -1377 1719 110 0 4 chr17 419281 419518 -89085035 - AluSg SINE Alu -19 291 56 2235 98 0 0 chr17 419523 419829 -89084724 - AluSq SINE Alu -7 306 1 1068 282 72 32 chr17 419829 420189 -89084364 + L2 LINE L2 1940 2328 -986 2152 98 3 0 chr17 420193 420488 -89084065 - AluSq SINE Alu -17 296 1 1130 233 32 0 chr17 420488 420737 -89083816 - MSTD-int LTR MaLR -1477 258 2 1166 194 85 62 chr17 420737 421191 -89083362 - MSTD LTR MaLR -2 426 1 768 311 81 58 chr17 421258 421833 -89082720 + L2 LINE L2 2370 2981 -332 2293 78 0 0 chr17 421833 422127 -89082426 + AluY SINE Alu 1 294 -17 768 311 81 58 chr17 422127 422467 -89082086 + L2 LINE L2 2981 3312 -1 1763 148 18 0 chr17 422993 423277 -89081276 - AluJb SINE Alu -13 299 11 309 26 0 0 chr17 423286 423324 -89081229 + (CCTG)n Simple_repeat Simple_repeat 2 39 0 42718 59 4 4 chr17 425782 431488 -89073065 - L1P2 LINE L1 -439 5715 11 313 285 40 99 chr17 431540 431691 -89072862 + MIR3 SINE MIR 56 197 -11 2287 88 0 3 chr17 431799 432105 -89072448 - AluSq SINE Alu -8 305 1 1625 156 0 8 chr17 432444 432700 -89071853 - AluJb SINE Alu -54 258 5 1650 182 7 0 chr17 435095 435392 -89069161 - AluJb SINE Alu -13 299 1 292 194 0 0 chr17 435658 435720 -89068833 + L1MA3 LINE L1 5104 5165 -981 519 118 24 0 chr17 435774 435859 -89068694 - L1M LINE L1 -784 5396 5310 2093 181 37 18 chr17 437244 437698 -89066855 + L1MA3 LINE L1 5838 6300 -5 1269 172 38 34 chr17 437814 438105 -89066448 - AluJo SINE Alu -20 292 1 189 94 0 0 chr17 439747 439779 -89064774 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 2069 90 11 0 chr17 439782 440060 -89064493 - AluSp SINE Alu -32 281 1 279 0 0 0 chr17 440225 440256 -89064297 + (TG)n Simple_repeat Simple_repeat 1 31 0 2202 92 0 19 chr17 440273 440590 -89063963 - AluY SINE Alu 0 311 1 198 0 0 0 chr17 442267 442289 -89062264 + (TG)n Simple_repeat Simple_repeat 1 22 0 2007 90 14 4 chr17 442289 442568 -89061985 - AluSq SINE Alu -31 282 1 183 216 0 0 chr17 443297 443334 -89061219 + L2 LINE L2 3232 3268 -4 1654 166 7 24 chr17 443380 443676 -89060877 - AluSx SINE Alu -21 291 1 1347 143 4 30 chr17 443841 444071 -89060482 - AluJo SINE Alu -16 296 73 1151 211 12 37 chr17 444326 444568 -89059985 - L1MC1 LINE L1 0 6333 6098 946 168 0 6 chr17 444572 444733 -89059820 - FAM SINE Alu -10 175 16 1793 170 10 3 chr17 444775 445081 -89059472 + AluJb SINE Alu 1 308 -4 273 151 0 0 chr17 445089 445142 -89059411 + GA-rich Low_complexity Low_complexity 4 56 0 2099 95 7 14 chr17 445665 445961 -89058592 - AluSg SINE Alu -16 294 1 2066 100 0 27 chr17 446442 446742 -89057811 - AluSq SINE Alu -21 292 1 21 0 0 0 chr17 446875 446896 -89057657 + AT_rich Low_complexity Low_complexity 1 21 0 1171 233 129 20 chr17 446901 447249 -89057304 - L1ME3A LINE L1 -10 6160 5775 918 227 21 5 chr17 447258 447452 -89057101 - MER58A DNA MER1_type 0 224 28 1838 137 10 3 chr17 447811 448117 -89056436 - AluSx SINE Alu -4 308 1 1603 166 7 0 chr17 448270 448541 -89056012 - AluJo SINE Alu 0 312 40 1897 149 0 0 chr17 448552 448840 -89055713 - AluSx SINE Alu -12 300 13 1000 128 12 6 chr17 450048 450212 -89054341 + AluSg/x SINE Alu 137 301 -9 1790 148 3 10 chr17 451152 451450 -89053103 + AluJb SINE Alu 1 296 -16 214 356 53 53 chr17 451485 451693 -89052860 + L2 LINE L2 2845 3052 -220 318 244 61 0 chr17 451715 451797 -89052756 - MIR3 SINE MIR -8 200 114 376 189 4 7 chr17 451999 452235 -89052318 + AluJo SINE Alu 1 299 -3 1342 172 29 44 chr17 453281 453554 -89050999 - AluJo SINE Alu -32 280 12 1461 145 4 0 chr17 453565 453792 -89050761 - MER44D DNA MER2_type -1 604 322 2112 113 7 0 chr17 453849 454151 -89050402 - AluSg SINE Alu -6 304 1 1095 53 0 0 chr17 454152 454284 -89050269 - AluSg SINE Alu -178 132 1 1460 198 12 1 chr17 455004 455493 -89049060 - MER44D DNA MER2_type -1 604 1 1412 258 112 38 chr17 455512 456019 -89048534 - L3 LINE CR1 -23 1554 1010 405 252 72 9 chr17 456268 456379 -89048174 - L3 LINE CR1 -553 1024 907 806 291 84 7 chr17 456379 456664 -89047889 - MER102b DNA MER1_type 0 341 35 527 316 163 14 chr17 456670 456952 -89047601 - L3 LINE CR1 -664 913 590 189 320 90 58 chr17 457017 457173 -89047380 + MIR SINE MIR 82 242 -20 2139 126 0 0 chr17 457231 457540 -89047013 + AluSx SINE Alu 1 309 -3 741 223 66 18 chr17 457540 457696 -89046857 + AluJo SINE Alu 134 300 -12 2014 124 101 20 chr17 458516 458863 -89045690 - THE1C LTR MaLR 0 375 1 406 207 256 0 chr17 459107 459228 -89045325 + MIR SINE MIR 49 200 -62 1662 162 13 26 chr17 459250 459413 -89045140 - AluJo SINE Alu -13 299 135 2064 105 3 3 chr17 459413 459709 -89044844 - AluSc SINE Alu -13 296 1 2074 109 0 3 chr17 459709 460001 -89044552 - AluSx SINE Alu -20 292 1 1662 162 13 26 chr17 460001 460139 -89044414 - AluJo SINE Alu -175 137 1 1652 191 7 10 chr17 460663 460967 -89043586 - AluJo SINE Alu -9 303 1 1268 191 29 51 chr17 460969 461283 -89043270 - AluJo SINE Alu -2 310 4 1952 164 11 35 chr17 461306 461678 -89042875 - MER47A DNA MER2_type 0 366 4 2082 106 3 7 chr17 461996 462299 -89042254 - AluSq SINE Alu -11 302 1 1583 240 108 14 chr17 462324 462824 -89041729 - L1M4 LINE L1 -1526 4620 4074 275 102 61 0 chr17 462825 462874 -89041679 - L1MCc LINE L1 -4151 2971 2920 333 255 59 93 chr17 462884 463088 -89041465 - L1MCc LINE L1 -4329 2793 2597 33 0 0 0 chr17 463096 463129 -89041424 + AT_rich Low_complexity Low_complexity 1 33 0 776 181 0 8 chr17 463154 463287 -89041266 - FLAM_A SINE Alu -1 132 1 285 294 46 0 chr17 463319 463428 -89041125 - L1MA9 LINE L1 -38 6274 6161 * 749 251 44 36 chr17 463423 463698 -89040855 - L1MCc LINE L1 -4614 2508 2232 * 1106 226 46 77 chr17 463693 464323 -89040230 - L1MCc LINE L1 -4887 1536 1278 1023 261 71 25 chr17 464321 464715 -89039838 - L1MCc LINE L1 -5995 428 17 * 712 167 7 211 chr17 464715 465009 -89039544 + Charlie1 DNA MER1_type 2187 2420 -341 1474 219 40 26 chr17 465012 465359 -89039194 + MLT1A1 LTR MaLR 12 363 -2 1645 181 35 84 chr17 465362 465569 -89038984 + Charlie1 DNA MER1_type 2329 2544 -217 1986 120 0 0 chr17 465569 465853 -89038700 + AluSg SINE Alu 1 284 -26 188 35 35 0 chr17 465857 465886 -89038667 + (CAAA)n Simple_repeat Simple_repeat 2 31 0 1645 181 35 84 chr17 465886 466127 -89038426 + Charlie1 DNA MER1_type 2547 2760 -1 418 281 35 9 chr17 466209 466323 -89038230 - L2 LINE L2 0 3313 3197 233 270 120 41 chr17 466411 466678 -89037875 - L1M4 LINE L1 -2202 3944 3657 2188 110 0 0 chr17 466691 466992 -89037561 - AluSx SINE Alu -11 301 1 1180 62 0 7 chr17 466992 467138 -89037415 - AluSq/x SINE Alu -168 145 1 2189 92 0 3 chr17 467465 467771 -89036782 - AluSc SINE Alu -4 305 1 763 131 0 0 chr17 468098 468205 -89036348 - AluSq/x SINE Alu -203 109 3 906 191 153 0 chr17 468215 468477 -89036076 - L1M4 LINE L1 -869 5277 4976 468 0 0 0 chr17 468661 468713 -89035840 + (TG)n Simple_repeat Simple_repeat 1 52 0 2169 39 11 18 chr17 468713 468993 -89035560 - AluY SINE Alu -33 278 1 190 89 67 22 chr17 469028 469073 -89035480 + CT-rich Low_complexity Low_complexity 4 50 0 2187 185 102 20 chr17 469333 469831 -89034722 + L1MB7 LINE L1 5627 6165 -19 1528 210 13 3 chr17 469928 470237 -89034316 + AluJo SINE Alu 1 312 0 405 0 0 0 chr17 471687 471732 -89032821 + (GA)n Simple_repeat Simple_repeat 2 46 0 423 0 0 0 chr17 471755 471802 -89032751 + (TG)n Simple_repeat Simple_repeat 2 48 0 1872 104 59 0 chr17 471935 472205 -89032348 + AluSc SINE Alu 11 296 -13 305 305 104 19 chr17 472346 472500 -89032053 - MIR SINE MIR -79 183 17 345 130 40 30 chr17 472532 472632 -89031921 + CT-rich Low_complexity Low_complexity 2 102 0 1833 147 16 0 chr17 472661 472967 -89031586 - AluSx SINE Alu -1 311 1 2286 96 0 0 chr17 473986 474289 -89030264 - AluSc SINE Alu -6 303 1 1771 157 10 10 chr17 474292 474591 -89029962 - AluSx SINE Alu -9 303 5 253 188 125 0 chr17 475626 475690 -89028863 + MER94 DNA DNA 4 75 -59 2215 116 6 26 chr17 475836 476180 -89028373 - MER1B DNA MER1_type 0 337 1 243 259 184 23 chr17 476435 476609 -89027944 + L2 LINE L2 1597 1798 -1516 867 198 8 118 chr17 476611 476848 -89027705 - MER58A DNA MER1_type -3 221 11 1068 282 72 32 chr17 476872 476976 -89027577 + L2 LINE L2 1839 1937 -1377 1719 110 0 4 chr17 476976 477213 -89027340 - AluSg SINE Alu -19 291 56 2182 108 0 0 chr17 477218 477524 -89027029 - AluSq SINE Alu -7 306 1 1068 282 72 32 chr17 477524 477884 -89026669 + L2 LINE L2 1940 2328 -986 2152 98 3 0 chr17 477888 478183 -89026370 - AluSq SINE Alu -17 296 1 1157 225 32 0 chr17 478183 478432 -89026121 - MSTD-int LTR MaLR -1477 258 2 1166 191 82 59 chr17 478432 478886 -89025667 - MSTD LTR MaLR -2 426 1 789 311 82 58 chr17 478953 479528 -89025025 + L2 LINE L2 2370 2983 -330 2306 75 0 0 chr17 479528 479822 -89024731 + AluY SINE Alu 1 294 -17 789 311 82 58 chr17 479822 480161 -89024392 + L2 LINE L2 2983 3312 -1 1749 151 18 0 chr17 480687 480971 -89023582 - AluJb SINE Alu -13 299 11 306 0 0 0 chr17 480980 481014 -89023539 + (CCTG)n Simple_repeat Simple_repeat 2 35 0 934 129 24 0 chr17 481016 481186 -89023367 + CT-rich Low_complexity Low_complexity 4 177 0 186 43 0 0 chr17 481187 481210 -89023343 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 2106 91 0 0 chr17 481210 481486 -89023067 - AluY SINE Alu -35 276 1 216 0 0 0 chr17 482325 482349 -89022204 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2306 70 0 7 chr17 482356 482656 -89021897 - AluSc SINE Alu -11 298 1 410 257 114 0 chr17 483033 483138 -89021415 + MIR SINE MIR 110 226 -36 675 227 28 90 chr17 483531 483781 -89020772 - MIR SINE MIR -14 248 23 1941 110 11 0 chr17 484315 484624 -89019929 + AluSx SINE Alu 1 312 0 23 0 0 0 chr17 484777 484800 -89019753 + AT_rich Low_complexity Low_complexity 1 23 0 225 0 0 0 chr17 487116 487141 -89017412 + (CA)n Simple_repeat Simple_repeat 2 26 0 2463 48 3 0 chr17 489089 489399 -89015154 - AluY SINE Alu 0 311 1 1933 119 0 0 chr17 489644 489938 -89014615 - AluY SINE Alu -13 298 5 245 116 23 0 chr17 489938 489981 -89014572 - Alu SINE Alu -259 44 1 1871 197 217 12 chr17 491067 491560 -89012993 - MLT1G1 LTR MaLR 0 595 2 2095 97 28 0 chr17 491560 491849 -89012704 + AluSx SINE Alu 1 297 -15 1132 180 0 9 chr17 492264 492475 -89012078 - AluJo SINE Alu -30 282 74 344 268 212 45 chr17 492976 493337 -89011216 - L1ME LINE L1 -348 5822 5394 1807 159 0 7 chr17 493341 493642 -89010911 - AluJo SINE Alu -13 299 1 456 282 33 74 chr17 493658 494048 -89010505 - L1MEd LINE L1 -1173 1317 895 2123 113 0 10 chr17 494666 494976 -89009577 - AluSx SINE Alu -5 307 1 1129 184 0 10 chr17 495499 495706 -89008847 - AluJo SINE Alu -107 205 1 456 282 33 74 chr17 495722 496112 -89008441 - L1MEd LINE L1 -1173 1317 895 1996 125 0 13 chr17 497508 497819 -89006734 - AluSx SINE Alu -5 307 1 319 341 77 18 chr17 498630 498800 -89005753 - L2 LINE L2 -1 3312 3133 923 223 23 11 chr17 501517 501782 -89002771 + L1M4 LINE L1 4986 5253 -893 8802 26 0 1 chr17 552020 553039 -88951514 + L1P LINE L1 3793 4810 -1336 287 247 65 0 chr17 553052 553129 -88951424 - HsTC2 DNA Tc2 -546 1352 1271 712 258 117 11 chr17 553136 553419 -88951134 - L1MC4 LINE L1 0 8042 7730 25 83 0 0 chr17 553657 553717 -88950836 + AT_rich Low_complexity Low_complexity 1 60 0 25 0 0 0 chr17 554283 554308 -88950245 + AT_rich Low_complexity Low_complexity 1 25 0 776 208 0 91 chr17 554383 554410 -88950143 + L1MA10 LINE L1 6124 6152 -182 2009 114 3 7 chr17 554410 554721 -88949832 - AluSg SINE Alu 0 310 2 776 208 0 91 chr17 554721 554924 -88949629 + L1MA10 LINE L1 6152 6333 -1 227 195 0 0 chr17 555260 555301 -88949252 + (TCTG)n Simple_repeat Simple_repeat 1 41 0 1864 163 0 0 chr17 555395 555695 -88948858 + AluSx SINE Alu 1 300 -12 286 267 61 30 chr17 555889 556020 -88948533 + MIR SINE MIR 77 211 -51 2576 183 170 58 chr17 556851 557110 -88947443 - L1MC4a LINE L1 -1 7807 7578 1470 169 55 0 chr17 557110 557383 -88947170 - AluJo SINE Alu -24 288 1 2576 183 170 58 chr17 557383 557926 -88946627 - L1MC4a LINE L1 -230 7578 6940 1491 172 39 26 chr17 557932 558240 -88946313 + AluJb SINE Alu 1 312 0 1757 172 7 0 chr17 567972 568275 -88936278 - AluJb SINE Alu -7 305 1 200 241 148 111 chr17 568952 569168 -88935385 + MIR SINE MIR 2 225 -37 10368 29 8 106 chr17 569715 571247 -88933306 - SVA Other Other -3 1383 2 321 26 0 0 chr17 571251 571289 -88933264 + (GGGAGA)n Simple_repeat Simple_repeat 6 43 0 467 203 0 3 chr17 571299 571394 -88933159 - L1MC4 LINE L1 -2 8040 7889 221 190 52 0 chr17 571432 571490 -88933063 + T-rich Low_complexity Low_complexity 5 65 0 291 93 0 0 chr17 571490 571533 -88933020 + (TCCCC)n Simple_repeat Simple_repeat 1 43 0 1133 160 37 0 chr17 571533 571721 -88932832 - AluJb SINE Alu -117 195 1 753 165 49 18 chr17 571726 571890 -88932663 - L1MC4 LINE L1 -142 7900 7732 * 2693 166 80 219 chr17 571889 572359 -88932194 - L1MC4 LINE L1 -234 7808 7274 2116 108 3 19 chr17 572359 572673 -88931880 - AluSq SINE Alu -4 309 1 2693 166 80 219 chr17 572673 572831 -88931722 - L1MC4 LINE L1 -768 7274 7096 1935 114 59 7 chr17 572831 573121 -88931432 - AluSx SINE Alu -7 305 1 2693 166 80 219 chr17 573121 574057 -88930496 - L1MC4 LINE L1 -946 7096 6461 1728 157 33 17 chr17 574211 574511 -88930042 + AluJb SINE Alu 1 305 -7 267 31 0 0 chr17 574837 574869 -88929684 + (TCCCC)n Simple_repeat Simple_repeat 5 36 0 1104 194 0 9 chr17 574871 575087 -88929466 - AluJo SINE Alu -32 280 67 1103 151 0 0 chr17 575091 575257 -88929296 + AluJb SINE Alu 135 300 -12 2113 98 3 19 chr17 575713 576028 -88928525 + AluSg SINE Alu 1 310 0 393 264 42 35 chr17 576375 576519 -88928034 + MER117 DNA MER1_type 19 163 -34 2714 10 0 3 chr17 576527 576836 -88927717 - AluYa5 SINE Alu -3 308 1 2285 96 0 3 chr17 577324 577638 -88926915 - AluSp SINE Alu 0 313 1 1887 104 3 68 chr17 578016 578196 -88926357 - AluSx SINE Alu -7 305 154 2178 89 13 13 chr17 578196 578499 -88926054 - AluY SINE Alu -8 303 1 1887 104 3 68 chr17 578499 578644 -88925909 - AluSx SINE Alu -158 154 1 1112 82 0 0 chr17 578644 578790 -88925763 - AluSq/x SINE Alu -166 146 1 694 309 35 43 chr17 578984 579160 -88925393 + MIR SINE MIR 8 183 -79 2089 111 6 16 chr17 579160 579475 -88925078 + AluSx SINE Alu 1 312 0 694 309 35 43 chr17 579475 579554 -88924999 + MIR SINE MIR 183 261 -1 205 227 303 0 chr17 579627 579693 -88924860 + MIR SINE MIR 50 135 -73 1642 128 0 8 chr17 580864 581137 -88923416 + AluSx SINE Alu 39 309 0 357 298 66 50 chr17 581142 581323 -88923230 - L1ME4a LINE L1 -92 6029 5846 399 302 114 0 chr17 581323 581472 -88923081 - LTR33 LTR ERVL 0 521 356 242 267 44 0 chr17 583468 583558 -88920995 - L1ME4a LINE L1 -73 6048 5955 1852 119 0 41 chr17 583739 584054 -88920499 - AluSg SINE Alu 0 303 1 2037 103 0 3 chr17 584109 584399 -88920154 - AluY SINE Alu -15 296 8 1364 92 0 0 chr17 584399 584572 -88919981 - AluY SINE Alu -138 173 1 1951 158 0 0 chr17 584598 584902 -88919651 + AluJo SINE Alu 1 304 -8 885 208 35 10 chr17 585066 585268 -88919285 + L1MC5 LINE L1 6660 6866 -1095 960 223 83 55 chr17 585277 585604 -88918949 + MLT1C LTR MaLR 6 341 -126 1088 94 0 13 chr17 585609 585758 -88918795 + AluSq/x SINE Alu 5 151 -161 512 275 69 72 chr17 585788 586093 -88918460 + L2 LINE L2 3009 3312 -1 631 174 144 0 chr17 586095 586227 -88918326 - MSTD LTR MaLR -243 153 3 659 152 67 42 chr17 586257 586422 -88918131 - L1MC3 LINE L1 0 7785 7617 1373 159 41 44 chr17 586466 586761 -88917792 - AluJo SINE Alu -18 294 1 951 222 40 48 chr17 586772 587123 -88917430 - L1MC5 LINE L1 -453 7508 7161 1393 82 0 16 chr17 587123 587317 -88917236 + AluSx SINE Alu 1 191 -121 341 49 0 0 chr17 587319 587360 -88917193 + AluSg SINE Alu 59 99 -201 500 290 98 59 chr17 587446 587701 -88916852 - L2 LINE L2 -348 2966 2702 308 273 45 18 chr17 587726 587836 -88916717 + L2 LINE L2 3201 3313 0 332 248 149 12 chr17 587841 588002 -88916551 - L1ME4a LINE L1 -406 5715 5533 1942 100 3 65 chr17 588037 588346 -88916207 + AluSq SINE Alu 3 292 -21 362 282 32 16 chr17 588474 588598 -88915955 + L2 LINE L2 3173 3298 -15 479 222 296 15 chr17 588738 588888 -88915665 + MIR SINE MIR 3 110 -152 2129 98 24 0 chr17 588888 589183 -88915370 + AluSq SINE Alu 1 302 -11 479 222 296 15 chr17 589183 589235 -88915318 + MIR SINE MIR 110 262 0 1565 187 3 3 chr17 591173 591473 -88913080 - AluJo SINE Alu -12 300 1 1168 192 18 39 chr17 592172 592401 -88912152 + MER58A DNA MER1_type 1 224 0 341 292 119 40 chr17 592477 592703 -88911850 + MIR SINE MIR 13 256 -6 199 336 65 42 chr17 594557 594774 -88909779 + L2 LINE L2 2807 3028 -244 4120 191 65 37 chr17 594792 594842 -88909711 - L1MB7 LINE L1 -21 6163 6116 1467 170 83 4 chr17 594842 595119 -88909434 + AluSx SINE Alu 1 299 -13 4120 191 65 37 chr17 595119 595581 -88908972 - L1MB7 LINE L1 -68 6116 5668 2308 85 0 7 chr17 595581 595887 -88908666 + AluSx SINE Alu 1 304 -8 4120 191 65 37 chr17 595887 596381 -88908172 - L1MB7 LINE L1 -516 5668 5189 423 0 0 0 chr17 596381 596428 -88908125 + (TG)n Simple_repeat Simple_repeat 1 47 0 4120 191 65 37 chr17 596428 596881 -88907672 - L1MB7 LINE L1 -995 5189 4660 180 336 126 17 chr17 596947 597066 -88907487 + L2 LINE L2 3098 3229 -43 1639 169 0 4 chr17 597688 597960 -88906593 - AluJo SINE Alu -41 271 1 357 275 181 7 chr17 597999 598148 -88906405 - MIR SINE MIR -1 261 87 491 198 0 0 chr17 598152 598233 -88906320 + AluJb SINE Alu 168 248 -64 227 240 0 0 chr17 598287 598337 -88906216 - MIR SINE MIR -122 140 91 312 165 0 26 chr17 598347 598412 -88906141 - Alu SINE Alu -250 53 1 875 91 0 57 chr17 598699 598943 -88905610 + (TCCC)n Simple_repeat Simple_repeat 1 230 0 307 77 0 0 chr17 598943 598982 -88905571 + (TTCC)n Simple_repeat Simple_repeat 2 40 0 209 333 33 0 chr17 598988 599048 -88905505 - MIR SINE MIR -110 98 37 2113 114 10 3 chr17 599764 600062 -88904491 - AluSx SINE Alu -12 300 1 509 301 94 18 chr17 600198 600436 -88904117 - MIR SINE MIR 0 262 7 210 290 67 104 chr17 600446 600639 -88903914 + MIR SINE MIR 67 252 -10 186 250 0 0 chr17 600756 600792 -88903761 + L2 LINE L2 3262 3297 -16 194 289 0 0 chr17 600796 600841 -88903712 + L2 LINE L2 3262 3306 -7 223 244 0 0 chr17 601307 601352 -88903201 + L2 LINE L2 3262 3306 -7 1894 138 12 66 chr17 602253 602572 -88901981 + AluJo SINE Alu 1 302 -10 223 328 74 33 chr17 602843 602965 -88901588 + MIR SINE MIR 77 203 -59 690 162 0 0 chr17 603084 603195 -88901358 - AluJb SINE Alu -55 257 147 305 240 221 0 chr17 604009 604113 -88900440 + MIR3 SINE MIR 78 204 -4 354 258 164 25 chr17 604924 605083 -88899470 - L1MC5 LINE L1 -37 7924 7744 1140 199 83 15 chr17 605768 606034 -88898519 - L1MC1 LINE L1 -1 6332 6049 1978 167 0 0 chr17 607823 608122 -88896431 - AluJo SINE Alu -13 299 1 2330 105 0 0 chr17 608618 608914 -88895639 + AluSx SINE Alu 1 296 -16 198 387 108 35 chr17 608921 609345 -88895208 - L2 LINE L2 -4 3268 2814 872 189 44 0 chr17 609349 609508 -88895045 + AluJo SINE Alu 1 166 -146 244 283 168 0 chr17 610078 610191 -88894362 - L2 LINE L2 0 3313 3182 1986 117 53 17 chr17 610199 610499 -88894054 + AluSx SINE Alu 1 311 -1 2485 72 13 3 chr17 610510 610815 -88893738 + AluSq SINE Alu 1 308 -5 1274 102 17 11 chr17 610815 610991 -88893562 + AluSg/x SINE Alu 134 310 -2 1184 194 53 30 chr17 610989 611252 -88893301 + AluJb SINE Alu 27 295 -17 * 1894 237 43 124 chr17 612058 612305 -88892248 + L1MB7 LINE L1 4052 4317 -1829 2149 101 13 44 chr17 612305 612623 -88891930 + AluSg SINE Alu 1 308 -2 1894 237 43 124 chr17 612623 612720 -88891833 + L1MB7 LINE L1 4317 4420 -1726 1243 152 108 50 chr17 612720 612997 -88891556 - AluJo SINE Alu -19 293 1 1894 237 43 124 chr17 612997 613176 -88891377 + L1MB7 LINE L1 4420 4612 -1534 244 191 0 0 chr17 613176 613218 -88891335 + MER57A LTR ERV1 295 336 -67 1894 237 43 124 chr17 613218 613334 -88891219 + L1MB7 LINE L1 4612 4736 -1410 318 26 0 0 chr17 613334 613373 -88891180 + (TG)n Simple_repeat Simple_repeat 1 39 0 1894 237 43 124 chr17 613373 613711 -88890842 + L1MB7 LINE L1 4736 4966 -1180 3583 139 42 6 chr17 613711 613860 -88890693 + L1MB7 LINE L1 5504 5646 -538 2292 114 3 13 chr17 613860 614175 -88890378 + AluSx SINE Alu 1 312 0 3583 139 42 6 chr17 614175 614664 -88889889 + L1MB7 LINE L1 5646 6165 -19 1894 237 43 124 chr17 614664 614830 -88889723 + L1MB7 LINE L1 4966 5144 -1002 1891 163 11 3 chr17 614846 615129 -88889424 + AluJo SINE Alu 1 285 -27 1046 208 42 17 chr17 615139 615375 -88889178 + L1ME3 LINE L1 5472 5713 -449 252 349 84 19 chr17 615490 615705 -88888848 + L1ME3 LINE L1 5928 6156 -6 2297 118 3 0 chr17 616737 617042 -88887511 - AluSx SINE Alu -6 306 1 1819 186 0 16 chr17 617044 617351 -88887202 - AluJo SINE Alu -10 302 1 635 282 48 97 chr17 617416 618262 -88886291 - L1ME3A LINE L1 -213 5951 5268 2048 81 102 18 chr17 618453 618737 -88885816 - AluSx SINE Alu 0 312 5 215 296 56 28 chr17 619829 619937 -88884616 + MIR SINE MIR 91 201 -61 309 336 73 0 chr17 620083 620193 -88884360 + L1ME4a LINE L1 5393 5510 -611 267 188 0 0 chr17 620298 620346 -88884207 - FAM SINE Alu -12 167 120 276 257 122 68 chr17 620411 620491 -88884062 + L1ME4a LINE L1 5869 5943 -178 1850 156 0 14 chr17 620491 620786 -88883767 - AluJb SINE Alu -21 291 1 276 257 122 68 chr17 620786 620942 -88883611 + L1ME4a LINE L1 5943 6118 -3 228 344 27 0 chr17 622460 622580 -88881973 + MER5A DNA MER1_type 47 173 -5 207 273 0 57 chr17 623199 623287 -88881266 + CT-rich Low_complexity Low_complexity 1 83 0 1388 70 12 0 chr17 623964 624135 -88880418 - AluSg/x SINE Alu -3 307 135 1281 168 48 0 chr17 624688 624897 -88879656 + AluJo SINE Alu 2 220 -92 2167 111 0 3 chr17 624937 625225 -88879328 + AluSx SINE Alu 1 287 -25 329 287 66 12 chr17 626035 626096 -88878457 - MER5B DNA MER1_type -2 176 120 2148 103 14 3 chr17 626096 626388 -88878165 + AluSc SINE Alu 1 295 -14 329 287 66 12 chr17 626388 626493 -88878060 - MER5B DNA MER1_type -58 120 1 2060 97 10 33 chr17 626654 626953 -88877600 + AluSx SINE Alu 1 292 -20 823 147 0 16 chr17 627098 627227 -88877326 + AluJo/FLAM SINE Alu 1 127 -185 2184 114 10 0 chr17 627227 627524 -88877029 + AluSx SINE Alu 1 300 -12 23 0 0 0 chr17 629315 629338 -88875215 + AT_rich Low_complexity Low_complexity 1 23 0 209 193 0 18 chr17 630954 631011 -88873542 + CT-rich Low_complexity Low_complexity 2 57 0 237 254 15 0 chr17 632171 632238 -88872315 - MIR SINE MIR -141 121 54 1192 179 0 9 chr17 634515 634733 -88869820 - MER46A DNA MER2_type 0 236 21 193 250 50 0 chr17 635717 635777 -88868776 + L2 LINE L2 1846 1908 -1406 180 267 50 0 chr17 635977 636037 -88868516 + L2 LINE L2 1846 1908 -1406 183 267 50 0 chr17 636172 636232 -88868321 + L2 LINE L2 1846 1908 -1406 193 250 50 0 chr17 636367 636427 -88868126 + L2 LINE L2 1846 1908 -1406 180 267 50 0 chr17 636497 636557 -88867996 + L2 LINE L2 1846 1908 -1406 180 267 50 0 chr17 636627 636687 -88867866 + L2 LINE L2 1846 1908 -1406 183 267 50 0 chr17 636822 636882 -88867671 + L2 LINE L2 1846 1908 -1406 180 267 50 0 chr17 636952 637012 -88867541 + L2 LINE L2 1846 1908 -1406 180 267 50 0 chr17 637147 637207 -88867346 + L2 LINE L2 1846 1908 -1406 180 267 50 0 chr17 637667 637727 -88866826 + L2 LINE L2 1846 1908 -1406 1059 109 24 6 chr17 638374 638539 -88866014 + Tigger5 DNA MER2_type 2156 2323 0 843 136 0 0 chr17 639118 639291 -88865262 - FLAM_C SINE Alu 0 174 2 2203 107 3 7 chr17 639941 640240 -88864313 + AluSg SINE Alu 1 298 -12 1050 130 62 0 chr17 640240 640402 -88864151 + AluSg/x SINE Alu 134 305 -7 365 225 85 70 chr17 640541 640670 -88863883 + MER8 DNA MER2_type 49 179 -60 281 297 0 0 chr17 640645 640709 -88863844 + MER2 DNA MER2_type 282 345 0 * 2294 86 3 13 chr17 640797 641099 -88863454 - AluSx SINE Alu -13 299 1 1279 226 35 41 chr17 641118 641485 -88863068 + MLT1A1 LTR MaLR 1 365 0 1928 139 35 3 chr17 641646 641933 -88862620 + AluJb SINE Alu 1 296 -16 2461 82 0 0 chr17 641972 642275 -88862278 + AluY SINE Alu 1 303 -8 2069 128 3 0 chr17 643427 643709 -88860844 + AluSx SINE Alu 1 283 -29 180 0 0 0 chr17 643709 643729 -88860824 + (TTAAA)n Simple_repeat Simple_repeat 3 22 0 2134 118 17 0 chr17 643738 644027 -88860526 + AluSq SINE Alu 1 294 -19 189 132 38 19 chr17 644185 644238 -88860315 + CT-rich Low_complexity Low_complexity 1 54 0 * 210 118 0 0 chr17 644231 644265 -88860288 + (TCCC)n Simple_repeat Simple_repeat 3 36 0 1804 167 17 0 chr17 644265 644565 -88859988 - AluJb SINE Alu -7 305 1 1071 83 0 0 chr17 644567 644700 -88859853 - AluSq/x SINE Alu -179 133 1 2240 113 0 28 chr17 646166 646484 -88858069 + AluSq SINE Alu 5 313 0 721 185 52 0 chr17 646785 646920 -88857633 - FRAM SINE Alu -25 151 10 255 167 0 50 chr17 646945 647005 -88857548 - AluJ SINE Alu -116 186 130 935 124 0 28 chr17 647023 647168 -88857385 + FLAM_C SINE Alu 1 141 -2 21 36 0 0 chr17 647190 647218 -88857335 + AT_rich Low_complexity Low_complexity 1 28 0 1037 161 0 22 chr17 647231 647411 -88857142 + FRAM SINE Alu 1 176 0 812 158 0 0 chr17 647412 647532 -88857021 - AluJ SINE Alu -192 120 1 2062 66 0 0 chr17 648503 648745 -88855808 - AluSq SINE Alu -71 242 1 1876 124 9 73 chr17 648985 649300 -88855253 + AluSx SINE Alu 1 295 -17 482 88 0 0 chr17 649303 649371 -88855182 + Alu SINE Alu 11 78 -232 324 200 10 60 chr17 849372 849472 -88655081 + L1MC4a LINE L1 7328 7422 -386 * 1174 219 45 6 chr17 849445 849779 -88654774 + L1MD3 LINE L1 7648 7994 -1 2640 13 0 7 chr17 849971 850273 -88654280 + AluYb8 SINE Alu 1 300 -18 1486 152 7 65 chr17 850522 850812 -88653741 - AluJo SINE Alu -39 273 1 2350 79 10 0 chr17 850822 851126 -88653427 - AluSx SINE Alu -5 307 1 1954 120 3 17 chr17 851439 851606 -88652947 - AluJb SINE Alu -11 301 138 2162 105 3 7 chr17 851606 851911 -88652642 - AluY SINE Alu -7 304 1 1954 120 3 17 chr17 851911 852035 -88652518 - AluJb SINE Alu -174 138 14 2317 74 0 0 chr17 852285 852582 -88651971 + AluY SINE Alu 1 297 -14 2264 71 19 13 chr17 852742 852875 -88651678 + AluSx SINE Alu 1 132 -180 2071 110 3 16 chr17 852875 853183 -88651370 + AluSp SINE Alu 1 304 -9 2264 71 19 13 chr17 853183 853359 -88651194 + AluSx SINE Alu 132 312 0 2384 57 0 0 chr17 853606 853904 -88650649 + AluY SINE Alu 1 298 -13 1835 92 0 12 chr17 856181 856431 -88648122 - AluSq SINE Alu -66 247 1 711 235 9 68 chr17 856456 856677 -88647876 + L1ME3 LINE L1 5923 6130 -32 1854 173 3 3 chr17 856693 857005 -88647548 - AluJo SINE Alu 0 312 1 2840 98 176 12 chr17 857042 857465 -88647088 - LTR61 LTR ERV1 0 595 73 2499 58 0 3 chr17 857465 857777 -88646776 - AluY SINE Alu 0 311 1 2840 98 176 12 chr17 857777 857863 -88646690 - LTR61 LTR ERV1 -522 73 2 384 278 68 8 chr17 857864 857997 -88646556 - MIR SINE MIR -104 158 18 266 353 32 19 chr17 858473 858629 -88645924 - L2 LINE L2 -905 2409 2252 2124 96 0 0 chr17 858799 859080 -88645473 - AluSx SINE Alu -3 309 29 411 86 0 0 chr17 859184 859242 -88645311 + AluSp/q SINE Alu 242 299 -14 288 342 108 4 chr17 859243 859503 -88645050 + L1ME LINE L1 5551 5837 -284 985 82 8 0 chr17 859982 860116 -88644437 + AluSq/x SINE Alu 1 135 -178 2070 113 10 0 chr17 860116 860408 -88644145 + AluSx SINE Alu 1 295 -17 32 0 0 0 chr17 860408 860440 -88644113 + AT_rich Low_complexity Low_complexity 1 32 0 290 332 56 78 chr17 860733 861001 -88643552 + MIR SINE MIR 1 262 0 440 75 0 0 chr17 861347 861414 -88643139 - AluSp/q SINE Alu 0 313 247 2145 119 0 0 chr17 861577 861879 -88642674 + AluSx SINE Alu 1 302 -10 257 135 313 10 chr17 861879 861975 -88642578 - L1 LINE L1 -1415 4731 4607 4343 177 74 63 chr17 861976 862189 -88642364 - Tigger1 DNA MER2_type -1238 1180 971 2177 105 0 0 chr17 862189 862511 -88642042 - AluSx SINE Alu 0 322 1 4343 177 74 63 chr17 862511 863032 -88641521 - Tigger1 DNA MER2_type -1447 971 425 2072 98 21 0 chr17 863032 863319 -88641234 - AluSg SINE Alu -15 295 3 4343 177 74 63 chr17 863319 863749 -88640804 - Tigger1 DNA MER2_type -1993 425 1 2141 58 0 0 chr17 865145 865405 -88639148 + AluSx SINE Alu 37 296 -16 1422 140 81 4 chr17 865661 865896 -88638657 + AluJo SINE Alu 14 266 -46 2146 111 0 10 chr17 866072 866370 -88638183 + AluSx SINE Alu 1 295 -17 898 187 0 0 chr17 867119 867133 -88637420 - AluSq/x SINE Alu -163 150 137 1332 365 0 31 chr17 867133 867454 -88637099 - AluSx SINE Alu -1 311 1 898 187 0 0 chr17 867454 867589 -88636964 - AluSq/x SINE Alu -175 138 1 204 308 34 127 chr17 867629 867866 -88636687 - L2 LINE L2 -77 3195 2981 4944 54 24 1 chr17 871132 871801 -88632752 - LTR13 LTR ERVK -323 684 1 315 0 0 0 chr17 871809 871844 -88632709 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 2118 93 0 20 chr17 872593 872895 -88631658 - AluSg SINE Alu -14 296 1 202 280 0 0 chr17 873331 873381 -88631172 + GA-rich Low_complexity Low_complexity 3 52 0 408 208 26 32 chr17 873641 873795 -88630758 + (CGGGG)n Simple_repeat Simple_repeat 3 155 0 195 152 0 0 chr17 874101 874147 -88630406 + G-rich Low_complexity Low_complexity 6 51 0 223 230 30 40 chr17 874287 874387 -88630166 + (CCCG)n Simple_repeat Simple_repeat 2 100 0 587 304 134 0 chr17 874487 874704 -88629849 - MIR SINE MIR -15 247 2 288 0 0 0 chr17 874803 874835 -88629718 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 1789 152 11 0 chr17 874837 875113 -88629440 - AluJb SINE Alu -33 279 1 2371 73 3 0 chr17 876754 877054 -88627499 - AluSp SINE Alu -11 302 2 207 0 0 0 chr17 878825 878848 -88625705 + (TCCCC)n Simple_repeat Simple_repeat 1 23 0 373 301 0 0 chr17 879093 879226 -88625327 + G-rich Low_complexity Low_complexity 1 133 0 897 163 0 0 chr17 879381 879516 -88625037 + AluJo SINE Alu 1 135 -177 1627 200 0 0 chr17 879516 879806 -88624747 + AluJb SINE Alu 1 290 -22 2128 110 3 0 chr17 880057 880349 -88624204 - AluSx SINE Alu -19 293 1 2071 116 10 0 chr17 880352 880644 -88623909 - AluSq SINE Alu -18 295 1 267 31 0 0 chr17 881187 881219 -88623334 + (TG)n Simple_repeat Simple_repeat 2 33 0 1552 182 7 20 chr17 881219 881376 -88623177 - AluJo SINE Alu -20 292 139 2045 78 32 0 chr17 881376 881657 -88622896 - AluSg SINE Alu -8 302 13 1552 182 7 20 chr17 881657 881795 -88622758 - AluJo SINE Alu -173 139 1 2135 109 0 0 chr17 882514 882808 -88621745 - AluSg SINE Alu -16 294 1 526 321 59 45 chr17 883281 883445 -88621108 + MIR SINE MIR 39 208 -54 2229 91 0 10 chr17 883445 883753 -88620800 + AluY SINE Alu 1 305 -6 526 321 59 45 chr17 883753 883809 -88620744 + MIR SINE MIR 208 262 0 228 333 42 0 chr17 884072 884168 -88620385 - MIR3 SINE MIR 0 208 109 1569 72 5 27 chr17 884229 884450 -88620103 - AluY SINE Alu -2 309 94 2019 147 0 0 chr17 885409 885708 -88618845 + AluJb SINE Alu 1 299 -13 1749 137 53 14 chr17 885709 886244 -88618309 + Tigger1 DNA MER2_type 1582 2208 -210 2142 109 3 0 chr17 886244 886547 -88618006 - AluY SINE Alu -7 304 1 2064 131 3 7 chr17 886548 886854 -88617699 - AluSx SINE Alu -7 305 1 248 217 17 0 chr17 886854 886914 -88617639 + Tigger1 DNA MER2_type 2356 2416 -2 6074 165 21 3 chr17 886915 888034 -88616519 - ERVL LTR ERVL -327 5437 4298 6127 195 17 12 chr17 888418 889720 -88614833 - ERVL LTR ERVL -1426 4338 3031 245 196 0 36 chr17 889723 889779 -88614774 - MLT2D LTR ERVL -360 54 1 239 114 0 0 chr17 889895 889930 -88614623 + Alu SINE Alu 1 35 -267 2213 84 0 20 chr17 890111 890410 -88614143 + AluSg SINE Alu 1 293 -17 229 325 34 34 chr17 890441 890558 -88613995 + MIR SINE MIR 28 144 -118 223 206 14 96 chr17 893367 893440 -88611113 - MIR3 SINE MIR -31 177 111 831 118 0 0 chr17 894199 894343 -88610210 + (TGGA)n Simple_repeat Simple_repeat 1 144 0 223 250 0 36 chr17 895692 895776 -88608777 + G-rich Low_complexity Low_complexity 1 81 0 682 268 41 41 chr17 897433 897676 -88606877 + MIR SINE MIR 10 252 -10 2080 135 3 0 chr17 897860 898171 -88606382 - AluSx SINE Alu 0 312 1 863 192 23 6 chr17 898240 898417 -88606136 - AluJb SINE Alu -12 300 121 271 272 39 10 chr17 898546 898649 -88605904 - L1MC5 LINE L1 -34 7927 7822 441 257 117 9 chr17 898741 898840 -88605713 - L1MC5 LINE L1 -267 7694 7607 2201 73 0 4 chr17 898840 899115 -88605438 - AluY SINE Alu -15 296 23 441 257 117 9 chr17 899115 899229 -88605324 - L1MC5 LINE L1 -354 7607 7458 410 263 47 52 chr17 899890 900103 -88604450 - L3 LINE CR1 -348 1229 1018 1316 82 26 60 chr17 900104 900180 -88604373 + MER30 DNA MER1_type 7 84 -146 2220 101 3 0 chr17 900180 900476 -88604077 + AluSp SINE Alu 1 297 -16 1316 82 26 60 chr17 900476 900631 -88603922 + MER30 DNA MER1_type 84 230 0 408 187 0 13 chr17 900672 900686 -88603867 - AluY SINE Alu -83 228 215 2176 106 7 3 chr17 900686 900988 -88603565 - AluSq SINE Alu -6 307 5 408 187 0 13 chr17 900988 901048 -88603505 - AluY SINE Alu -96 215 155 446 425 127 14 chr17 901048 901554 -88602999 - L3 LINE CR1 -830 747 185 2446 50 0 0 chr17 902732 903031 -88601522 - AluY SINE Alu -12 299 1 1758 187 3 0 chr17 903201 903506 -88601047 - AluSx SINE Alu -6 306 1 234 0 0 0 chr17 903586 903612 -88600941 + (TG)n Simple_repeat Simple_repeat 2 27 0 26 30 0 0 chr17 904250 904283 -88600270 + AT_rich Low_complexity Low_complexity 1 33 0 1038 106 0 0 chr17 904300 904441 -88600112 - AluJb SINE Alu -171 141 1 2174 119 3 0 chr17 904671 904974 -88599579 - AluSx SINE Alu -8 304 1 1697 98 38 0 chr17 905417 905652 -88598901 - AluSx SINE Alu -5 307 64 2244 85 0 0 chr17 905752 906035 -88598518 + AluSp SINE Alu 17 299 -14 284 309 86 63 chr17 907264 907439 -88597114 - MIR SINE MIR -27 235 57 230 322 75 62 chr17 907799 907945 -88596608 + MIR SINE MIR 102 249 -13 1125 73 0 0 chr17 907971 908108 -88596445 + AluSq/x SINE Alu 1 137 -176 2028 116 36 0 chr17 908108 908409 -88596144 + AluSx SINE Alu 1 312 0 222 325 12 24 chr17 908501 908584 -88595969 + L2 LINE L2 3226 3307 -6 423 0 0 0 chr17 909622 909669 -88594884 + (CA)n Simple_repeat Simple_repeat 2 48 0 297 242 0 0 chr17 909821 909887 -88594666 + MIR SINE MIR 166 231 -31 367 179 0 84 chr17 909960 910226 -88594327 + (CCA)n Simple_repeat Simple_repeat 1 243 0 461 328 50 35 chr17 910355 910696 -88593857 + MLT1I LTR MaLR 28 373 -36 2133 119 10 0 chr17 910702 911004 -88593549 - AluSx SINE Alu -7 305 1 1320 226 65 12 chr17 911472 911809 -88592744 + L1MB2 LINE L1 5667 6021 -150 975 188 0 5 chr17 911810 912002 -88592551 + MER1B DNA MER1_type 1 191 -106 435 90 0 26 chr17 912003 912081 -88592472 + MER1B DNA MER1_type 243 318 -21 437 247 110 0 chr17 912085 912231 -88592322 + L1MB3 LINE L1 6015 6176 -7 2522 44 0 13 chr17 912236 912551 -88592002 - AluY SINE Alu 0 311 1 28 48 0 0 chr17 912560 912602 -88591951 + AT_rich Low_complexity Low_complexity 1 42 0 2181 109 26 0 chr17 912759 913063 -88591490 - AluSx SINE Alu 0 312 1 779 263 69 23 chr17 913162 913379 -88591174 + MIR SINE MIR 35 261 -1 311 155 0 0 chr17 913499 913560 -88590993 - Alu SINE Alu -255 46 1 354 210 12 0 chr17 913747 913828 -88590725 + L1MB2 LINE L1 5907 5988 -183 899 216 33 9 chr17 914336 914549 -88590004 + MIR SINE MIR 2 219 -43 201 330 41 21 chr17 915054 915151 -88589402 + MIR SINE MIR 91 189 -73 325 80 0 0 chr17 915166 915216 -88589337 + AluY SINE Alu 83 132 -169 997 91 0 0 chr17 915219 915351 -88589202 + AluY SINE Alu 1 132 -179 2176 82 24 3 chr17 915354 915645 -88588908 + AluY SINE Alu 1 297 -14 2229 97 3 3 chr17 915652 915950 -88588603 + AluSq SINE Alu 1 298 -15 1798 100 89 0 chr17 916155 916424 -88588129 + AluSq SINE Alu 1 293 -20 1532 243 93 4 chr17 918724 919198 -88585355 + L1M4 LINE L1 4789 5304 -842 2198 75 41 0 chr17 919202 919494 -88585059 + AluSq SINE Alu 1 304 -9 2171 103 0 0 chr17 919929 920220 -88584333 + AluSx SINE Alu 9 299 -13 688 276 0 29 chr17 920220 920394 -88584159 - MIR SINE MIR -54 208 40 774 249 32 5 chr17 920557 920742 -88583811 - MIR SINE MIR -61 201 12 2365 90 0 0 chr17 920769 921070 -88583483 - AluSx SINE Alu -11 301 1 275 125 0 0 chr17 921830 921870 -88582683 + Alu SINE Alu 1 40 -261 2052 122 3 3 chr17 921906 922200 -88582353 + AluSx SINE Alu 1 294 -18 209 293 0 0 chr17 922337 922395 -88582158 - L2 LINE L2 -638 2676 2619 854 141 7 28 chr17 922403 922545 -88582008 + AluJo SINE Alu 1 139 -173 1677 142 0 76 chr17 922547 922688 -88581865 + AluJo SINE Alu 5 110 -202 2465 45 0 0 chr17 922688 922977 -88581576 + AluY SINE Alu 5 293 -18 1677 142 0 76 chr17 922977 923152 -88581401 + AluJo SINE Alu 110 297 -15 295 174 153 41 chr17 923278 923295 -88581258 + MER5A DNA MER1_type 1 15 -174 1992 118 20 14 chr17 923295 923592 -88580961 + AluSx SINE Alu 3 301 -11 295 174 153 41 chr17 923592 923672 -88580881 + MER5A DNA MER1_type 15 109 -80 263 254 35 12 chr17 924325 924494 -88580059 + (CACCT)n Simple_repeat Simple_repeat 1 173 0 213 272 47 6 chr17 924532 924701 -88579852 + (CACCT)n Simple_repeat Simple_repeat 3 178 0 1999 101 39 3 chr17 925078 925364 -88579189 - AluSc SINE Alu -13 296 1 1072 168 0 0 chr17 925513 925680 -88578873 - AluJb SINE Alu -9 303 137 2224 94 0 0 chr17 926054 926342 -88578211 + AluSx SINE Alu 1 288 -24 1297 223 41 0 chr17 926365 926684 -88577869 - MER63 DNA MER1_type -49 1013 682 1538 84 10 0 chr17 926685 926888 -88577665 - AluSq SINE Alu -5 308 104 1217 98 5 79 chr17 926888 927091 -88577462 - AluSg SINE Alu -122 188 1 1711 61 5 0 chr17 928155 928369 -88576184 + AluY SINE Alu 84 298 -13 514 228 65 8 chr17 928813 928936 -88575617 + MIR SINE MIR 63 192 -70 324 0 0 0 chr17 929864 929900 -88574653 + (TA)n Simple_repeat Simple_repeat 1 36 0 666 191 34 14 chr17 930296 930443 -88574110 - MER20 DNA MER1_type -1 218 69 1884 110 50 11 chr17 930443 930724 -88573829 - AluSg SINE Alu -18 292 1 25 0 0 0 chr17 932684 932709 -88571844 + AT_rich Low_complexity Low_complexity 1 25 0 824 249 40 20 chr17 938152 938353 -88566200 - MIR SINE MIR -37 225 21 261 329 58 44 chr17 942090 942227 -88562326 + MIR SINE MIR 16 154 -54 230 322 59 67 chr17 942797 943036 -88561517 - MER102b DNA MER1_type -9 332 96 300 281 49 0 chr17 944026 944108 -88560445 - MIR SINE MIR -79 183 98 244 290 160 10 chr17 944212 944312 -88560241 + MIR SINE MIR 94 208 -54 848 239 24 0 chr17 944487 944700 -88559853 - Charlie2 DNA MER1_type -41 2821 2604 2540 40 0 0 chr17 944700 944997 -88559556 + AluY SINE Alu 1 297 -14 520 254 103 15 chr17 945085 945097 -88559456 - Charlie2 DNA MER1_type -242 2620 2610 2290 73 0 26 chr17 945097 945410 -88559143 + AluY SINE Alu 1 305 -6 520 254 103 15 chr17 945410 945669 -88558884 - Charlie2 DNA MER1_type -252 2610 2325 1756 108 4 12 chr17 945675 945924 -88558629 + AluSq SINE Alu 1 247 -66 183 80 0 0 chr17 946274 946299 -88558254 + (CGGA)n Simple_repeat Simple_repeat 4 28 0 203 387 0 23 chr17 946398 946571 -88557982 + (CAGA)n Simple_repeat Simple_repeat 1 169 0 203 343 14 34 chr17 946623 946769 -88557784 + (CGGA)n Simple_repeat Simple_repeat 4 146 0 * 217 376 0 22 chr17 946742 946920 -88557633 + (CAGA)n Simple_repeat Simple_repeat 4 177 0 1236 264 77 22 chr17 946932 947286 -88557267 + L1MB3 LINE L1 5748 6128 -55 2188 95 3 7 chr17 947286 947581 -88556972 - AluSx SINE Alu -18 294 1 1236 264 77 22 chr17 947581 947631 -88556922 + L1MB3 LINE L1 6128 6174 -9 511 202 0 37 chr17 947631 947740 -88556813 - AluSg/x SINE Alu -4 305 201 295 376 27 7 chr17 948331 948480 -88556073 + MIR3 SINE MIR 29 180 -28 2097 118 0 3 chr17 948480 948777 -88555776 + AluSx SINE Alu 1 296 -16 277 327 149 14 chr17 949604 949812 -88554741 + MIR SINE MIR 26 261 -1 556 122 14 32 chr17 949902 949952 -88554601 - AluSg/x SINE Alu -131 181 132 1995 141 0 7 chr17 949952 950257 -88554296 - AluSx SINE Alu -9 303 1 556 122 14 32 chr17 950257 950326 -88554227 - AluSg/x SINE Alu -180 132 67 1263 140 5 0 chr17 950329 950522 -88554031 - AluSg SINE Alu -116 194 1 735 76 0 0 chr17 950522 950614 -88553939 - AluSg SINE Alu -177 133 42 336 195 25 33 chr17 950838 950930 -88553623 + MIR SINE MIR 65 156 -52 2048 97 49 0 chr17 953262 953550 -88551003 - AluSg SINE Alu -6 304 3 374 324 0 0 chr17 953762 953898 -88550655 - MER117 DNA MER1_type -52 145 10 299 273 0 29 chr17 954910 955049 -88549504 + C-rich Low_complexity Low_complexity 4 138 0 299 436 22 0 chr17 955280 955459 -88549094 + L2 LINE L2 3111 3293 -20 2173 102 7 3 chr17 955877 956180 -88548373 + AluSx SINE Alu 1 304 -8 262 168 5 138 chr17 956545 956741 -88547812 + G-rich Low_complexity Low_complexity 4 173 0 309 342 32 45 chr17 957100 957255 -88547298 - L1M4 LINE L1 -3110 3036 2884 2189 103 10 0 chr17 957275 957575 -88546978 - AluSx SINE Alu -7 305 3 892 138 0 0 chr17 957579 957709 -88546844 - AluSq/x SINE Alu -181 132 3 269 329 27 13 chr17 957723 957872 -88546681 - L1M4 LINE L1 -3321 2825 2675 2139 111 7 0 chr17 958064 958361 -88546192 - AluSx SINE Alu -13 299 1 370 303 49 32 chr17 959167 959352 -88545201 + MER117 DNA MER1_type 6 193 -4 2143 118 3 9 chr17 959450 959765 -88544788 - AluSq SINE Alu 0 313 1 550 324 70 5 chr17 960283 960496 -88544057 + MIR SINE MIR 28 254 -8 255 352 50 0 chr17 960544 960726 -88543827 + L1ME4a LINE L1 5743 5933 -188 2326 80 0 26 chr17 960914 961225 -88543328 + AluSx SINE Alu 1 303 -9 549 282 124 5 chr17 961756 961958 -88542595 + MIR SINE MIR 14 239 -23 2050 128 0 3 chr17 962413 962703 -88541850 + AluSx SINE Alu 1 289 -23 1581 100 0 0 chr17 963437 963647 -88540906 - AluSg/x SINE Alu -13 297 88 248 143 0 171 chr17 963788 964004 -88540549 + (AGGGGG)n Simple_repeat Simple_repeat 1 179 0 257 144 0 164 chr17 964072 964267 -88540286 + (AGGGGG)n Simple_repeat Simple_repeat 4 166 0 232 291 0 0 chr17 964492 964547 -88540006 + MIR SINE MIR 16 70 -192 335 323 81 6 chr17 965065 965226 -88539327 + MIR SINE MIR 16 188 -74 248 254 87 56 chr17 965999 966125 -88538428 + MIR SINE MIR 81 210 -52 943 103 0 0 chr17 966130 966256 -88538297 + FLAM_C SINE Alu 1 126 -7 371 233 12 0 chr17 966442 966528 -88538025 - MIR SINE MIR -141 121 35 2226 84 0 3 chr17 966569 966868 -88537685 - AluSg SINE Alu -12 298 1 270 335 28 50 chr17 967555 967737 -88536816 + L2 LINE L2 2671 2848 -466 530 29 15 0 chr17 968350 968418 -88536135 + (TG)n Simple_repeat Simple_repeat 2 70 0 1705 108 0 0 chr17 968418 968650 -88535903 - AluSg/x SINE Alu -11 301 70 432 67 0 0 chr17 968685 968745 -88535808 + (TG)n Simple_repeat Simple_repeat 1 60 0 212 330 88 51 chr17 968749 968949 -88535604 + MIR SINE MIR 19 216 -46 2326 100 0 0 chr17 969171 969481 -88535072 - AluSq SINE Alu -3 310 1 1125 277 71 30 chr17 969989 970524 -88534029 + MER74B LTR ERVL 56 612 -10 252 337 22 15 chr17 970835 970970 -88533583 + L1MC/D LINE L1 5440 5575 -578 2239 91 3 0 chr17 971171 971469 -88533084 + AluSx SINE Alu 2 300 -12 2275 89 0 22 chr17 971752 972066 -88532487 + AluSg SINE Alu 1 307 -3 511 107 27 0 chr17 972631 972706 -88531847 - AluS SINE Alu -235 77 1 2394 72 3 0 chr17 973402 973707 -88530846 + AluSx SINE Alu 1 306 -6 1591 114 5 0 chr17 975247 975466 -88529087 + AluSq SINE Alu 80 299 -14 473 280 36 36 chr17 976040 976208 -88528345 + MER5B DNA MER1_type 11 178 0 32 26 0 0 chr17 976215 976254 -88528299 + AT_rich Low_complexity Low_complexity 1 39 0 2178 109 0 0 chr17 976263 976557 -88527996 + AluSx SINE Alu 1 294 -18 316 96 115 0 chr17 976557 976609 -88527944 - AluJo/FLAM SINE Alu -182 120 63 527 132 13 0 chr17 976615 976691 -88527862 - AluJ/FLAM SINE Alu -220 92 16 322 302 101 23 chr17 977478 977607 -88526946 - MIR SINE MIR -14 248 110 243 0 0 0 chr17 978608 978635 -88525918 + (TG)n Simple_repeat Simple_repeat 1 27 0 223 167 30 0 chr17 979511 979577 -88524976 + G-rich Low_complexity Low_complexity 1 68 0 228 200 0 0 chr17 979685 979745 -88524808 + (CA)n Simple_repeat Simple_repeat 1 60 0 2385 96 0 0 chr17 980010 980322 -88524231 + AluSx SINE Alu 1 312 0 995 92 0 0 chr17 981747 981878 -88522675 - AluJb SINE Alu -181 131 1 2214 92 3 0 chr17 982088 982380 -88522173 - AluSx SINE Alu -19 293 1 196 262 33 49 chr17 983124 983185 -88521368 - L3 LINE CR1 -1 1576 1517 * 406 269 35 21 chr17 983182 983327 -88521226 - MER5A DNA MER1_type -6 183 37 2135 108 27 0 chr17 983353 983649 -88520904 + AluSx SINE Alu 1 304 -8 338 248 9 57 chr17 983650 983755 -88520798 - MIR3 SINE MIR -44 164 65 216 0 0 0 chr17 983766 983790 -88520763 + (T)n Simple_repeat Simple_repeat 1 24 0 24 0 0 0 chr17 983823 983847 -88520706 + AT_rich Low_complexity Low_complexity 1 24 0 2080 94 59 0 chr17 984615 984902 -88519651 + AluSx SINE Alu 1 304 -8 312 295 27 9 chr17 985199 985311 -88519242 + L1ME LINE L1 5416 5529 -635 2211 75 24 0 chr17 985313 985605 -88518948 - AluSp SINE Alu -14 299 1 939 81 0 0 chr17 985614 985738 -88518815 - AluSg/x SINE Alu -10 300 177 1454 34 0 22 chr17 985839 986017 -88518536 - AluY SINE Alu -137 174 1 287 263 32 0 chr17 986022 986117 -88518436 + L1ME LINE L1 5522 5619 -551 1085 220 27 8 chr17 986206 986465 -88518088 + MER33 DNA MER1_type 8 271 -53 808 169 0 8 chr17 986466 986596 -88517957 + AluSq/x SINE Alu 1 129 -183 387 0 0 0 chr17 988094 988137 -88516416 + (TAA)n Simple_repeat Simple_repeat 1 43 0 683 232 23 114 chr17 988144 988214 -88516339 - MIR SINE MIR -1 261 186 2205 107 0 22 chr17 988214 988533 -88516020 - AluSx SINE Alu 0 312 1 2185 116 0 7 chr17 988534 988837 -88515716 - AluSg SINE Alu -9 301 1 876 160 0 0 chr17 988844 988975 -88515578 - FLAM_C SINE Alu -2 131 1 683 232 23 114 chr17 988975 989157 -88515396 - MIR SINE MIR -82 180 23 2421 60 0 0 chr17 989319 989617 -88514936 + AluSq SINE Alu 1 298 -15 304 313 119 24 chr17 989712 989995 -88514558 - L2 LINE L2 -222 3050 2740 231 275 12 50 chr17 992664 992744 -88511809 + L3 LINE CR1 1426 1502 -75 196 252 184 78 chr17 993287 993390 -88511163 + MIR SINE MIR 38 151 -111 2130 123 0 3 chr17 993453 993754 -88510799 - AluSx SINE Alu -12 300 1 533 247 121 37 chr17 996366 996392 -88508161 - MIR SINE MIR -37 225 203 2360 96 0 0 chr17 996392 996695 -88507858 + AluSx SINE Alu 2 304 -8 533 247 121 37 chr17 996695 996858 -88507695 - MIR SINE MIR -59 203 20 225 269 15 30 chr17 997077 997144 -88507409 - MIR SINE MIR -56 152 87 2289 68 0 16 chr17 997148 997459 -88507094 - AluY SINE Alu -5 306 1 291 269 200 0 chr17 997524 997654 -88506899 + MER112 DNA MER1_type 66 221 -39 2220 71 0 4 chr17 997889 998169 -88506384 - AluSq SINE Alu -34 279 1 1813 142 14 7 chr17 998169 998458 -88506095 - AluSx SINE Alu -21 291 1 2316 91 7 0 chr17 998928 999235 -88505318 + AluSq SINE Alu 1 309 -4 2269 98 0 0 chr17 999910 1000206 -88504347 - AluSx SINE Alu -16 296 1 1164 54 0 20 chr17 1000209 1000357 -88504196 - AluSq/x SINE Alu -167 145 1 305 237 246 17 chr17 1000402 1000520 -88504033 - L1ME4a LINE L1 -14 6107 5963 342 232 174 51 chr17 1000695 1000806 -88503747 - L2 LINE L2 0 3313 3180 2590 42 0 0 chr17 1000806 1001115 -88503438 - AluY SINE Alu -2 309 1 342 232 174 51 chr17 1001115 1001141 -88503412 - L2 LINE L2 -133 3180 3159 920 205 44 61 chr17 1001419 1001531 -88503022 + MLT1D LTR MaLR 248 360 -145 1197 111 156 0 chr17 1001531 1001730 -88502823 + MER30 DNA MER1_type 1 230 0 920 205 44 61 chr17 1001730 1001788 -88502765 + MLT1D LTR MaLR 360 417 -88 2137 105 3 3 chr17 1001788 1002092 -88502461 - AluSx SINE Alu -8 304 1 920 205 44 61 chr17 1002092 1002192 -88502361 + MLT1D LTR MaLR 417 505 0 295 232 20 30 chr17 1003980 1004079 -88500474 + MER113 DNA MER1_type? 1 98 -423 1844 92 0 0 chr17 1004086 1004326 -88500227 - AluSg/x SINE Alu -7 305 66 2332 95 0 0 chr17 1004961 1005265 -88499288 - AluSx SINE Alu -8 304 1 206 299 65 56 chr17 1006330 1006437 -88498116 - MIR SINE MIR -56 206 99 207 244 0 0 chr17 1007552 1007597 -88496956 + G-rich Low_complexity Low_complexity 1 45 0 180 0 0 0 chr17 1007669 1007689 -88496864 + (CCG)n Simple_repeat Simple_repeat 2 21 0 512 277 47 14 chr17 1008839 1009052 -88495501 - Charlie8 DNA MER1_type -2183 234 15 934 141 14 0 chr17 1010890 1011032 -88493521 + FRAM SINE Alu 2 145 -31 300 137 0 0 chr17 1011034 1011085 -88493468 + (GGAA)n Simple_repeat Simple_repeat 4 54 0 483 305 71 46 chr17 1011459 1011698 -88492855 - L2 LINE L2 -4 3268 3024 2377 84 0 0 chr17 1011715 1012023 -88492530 - AluSx SINE Alu -4 308 1 306 318 18 18 chr17 1012025 1012135 -88492418 + L2 LINE L2 2997 3106 -166 666 177 9 0 chr17 1012455 1012568 -88491985 + FRAM SINE Alu 49 162 -14 2074 124 3 0 chr17 1012571 1012869 -88491684 + AluSx SINE Alu 1 299 -13 2407 65 0 0 chr17 1012873 1013166 -88491387 + AluSx SINE Alu 1 293 -19 504 164 22 104 chr17 1013255 1013389 -88491164 - L2 LINE L2 0 3313 3191 2189 88 0 7 chr17 1014025 1014321 -88490232 + AluSx SINE Alu 1 294 -18 2195 92 23 0 chr17 1014327 1014632 -88489921 + AluSx SINE Alu 1 312 0 581 230 24 0 chr17 1014717 1014843 -88489710 + MIR SINE MIR 48 176 -86 189 339 0 0 chr17 1015068 1015127 -88489426 + MIR SINE MIR 90 148 -114 185 333 91 10 chr17 1017940 1018039 -88486514 - L2 LINE L2 -5 3308 3202 802 251 6 0 chr17 1018243 1018406 -88486147 - FAM SINE Alu -11 164 1 561 270 20 0 chr17 1018406 1018543 -88486010 + MIR SINE MIR 82 224 -38 2079 112 0 31 chr17 1018604 1018925 -88485628 - AluSx SINE Alu -1 311 1 362 292 26 50 chr17 1019085 1019244 -88485309 - MIR3 SINE MIR -62 146 12 279 286 0 0 chr17 1020311 1020381 -88484172 - MIR SINE MIR -68 140 71 2277 104 0 0 chr17 1020382 1020681 -88483872 - AluSx SINE Alu -13 299 1 1814 244 20 75 chr17 1020751 1021301 -88483252 + MLT2B1 LTR ERVL 1 520 0 23 0 0 0 chr17 1023913 1023936 -88480617 + GC_rich Low_complexity Low_complexity 1 23 0 239 308 92 0 chr17 1025241 1025361 -88479192 + L2 LINE L2 3142 3272 0 587 247 88 83 chr17 1026857 1027278 -88477275 + MLT1J LTR MaLR 4 426 -85 397 257 59 26 chr17 1027281 1027433 -88477120 + MLT1J LTR MaLR 351 507 -4 739 95 0 1 chr17 1027551 1027661 -88476892 + L1PA8 LINE L1 5958 6068 -106 1909 128 23 7 chr17 1027661 1027967 -88476586 + AluY SINE Alu 1 311 0 739 95 0 1 chr17 1027967 1027980 -88476573 + L1PA8 LINE L1 6068 6080 -94 2070 145 0 0 chr17 1028072 1028382 -88476171 + AluSg SINE Alu 1 310 0 305 345 44 0 chr17 1028431 1028544 -88476009 + L1MC4 LINE L1 7924 8041 -1 785 270 104 37 chr17 1028994 1029427 -88475126 + MLT1C LTR MaLR 6 467 0 2393 73 0 3 chr17 1030519 1030819 -88473734 - AluSp SINE Alu -14 299 1 507 242 47 32 chr17 1030821 1031011 -88473542 - Charlie2 DNA MER1_type -556 2306 2114 460 137 41 0 chr17 1031025 1031098 -88473455 + FLAM SINE Alu 57 132 -11 892 275 30 0 chr17 1031099 1031361 -88473192 - Charlie2 DNA MER1_type -737 2125 1856 2361 76 3 0 chr17 1031375 1031677 -88472876 - AluSx SINE Alu -9 303 1 497 268 22 0 chr17 1031799 1031937 -88472616 - Charlie2 DNA MER1_type -2633 149 9 2308 98 7 0 chr17 1032524 1032829 -88471724 - AluSq SINE Alu -6 307 1 1057 82 0 0 chr17 1032829 1032964 -88471589 - AluSq/x SINE Alu -178 135 1 595 217 25 17 chr17 1032968 1033088 -88471465 - FLAM_C SINE Alu -15 128 8 2392 42 0 0 chr17 1033095 1033403 -88471150 - AluY SINE Alu 0 308 1 318 200 0 0 chr17 1033414 1033474 -88471079 - L1MA6 LINE L1 -5 6295 6236 265 309 161 2 chr17 1033663 1033815 -88470738 + MIR3 SINE MIR 10 187 -75 423 339 51 18 chr17 1033816 1034049 -88470504 - MIR SINE MIR -3 259 25 2362 70 3 0 chr17 1035143 1035444 -88469109 - AluSx SINE Alu -10 302 1 2072 60 53 21 chr17 1036585 1036868 -88467685 + AluSc SINE Alu 1 292 -17 820 82 4 2 chr17 1036938 1037194 -88467359 + AluSx SINE Alu 1 308 -4 2358 88 0 0 chr17 1038803 1039110 -88465443 + AluSx SINE Alu 1 307 -5 227 289 141 58 chr17 1039436 1039557 -88464996 + MIR SINE MIR 10 140 -122 1832 154 16 0 chr17 1039565 1039871 -88464682 + AluJb SINE Alu 1 311 -1 2350 62 7 10 chr17 1039898 1040206 -88464347 + AluY SINE Alu 1 307 -4 1276 101 0 0 chr17 1040207 1040386 -88464167 + AluSg/x SINE Alu 134 312 0 420 289 237 20 chr17 1040461 1040953 -88463600 + L2 LINE L2 2688 3297 -16 397 278 43 43 chr17 1041201 1041363 -88463190 - MIR3 SINE MIR -42 166 5 2096 76 0 28 chr17 1043170 1043459 -88461094 - AluSx SINE Alu -31 281 1 565 103 0 0 chr17 1043459 1043537 -88461016 - AluSq/x SINE Alu -177 135 58 202 244 0 0 chr17 1044163 1044208 -88460345 + A-rich Low_complexity Low_complexity 1 45 0 331 79 20 59 chr17 1046909 1047010 -88457543 + (TCCC)n Simple_repeat Simple_repeat 2 98 0 212 286 165 23 chr17 1048025 1048158 -88456395 - MIR SINE MIR -108 154 3 351 305 105 42 chr17 1048397 1048587 -88455966 - MIR SINE MIR -60 202 1 1867 127 64 0 chr17 1049030 1049313 -88455240 - AluSx SINE Alu -11 301 1 189 289 0 56 chr17 1049315 1049405 -88455148 - L2 LINE L2 0 3272 3188 429 317 0 16 chr17 1050362 1050545 -88454008 + C-rich Low_complexity Low_complexity 1 180 0 2471 56 0 0 chr17 1250548 1250836 -88253717 - AluY SINE Alu -23 288 1 1000 217 14 9 chr17 1250840 1251057 -88253496 - AluJo SINE Alu -10 302 85 1509 204 10 10 chr17 1251088 1251265 -88253288 - AluJb SINE Alu 0 312 133 1363 240 10 3 chr17 1251265 1251565 -88252988 - AluSg1 SINE Alu -7 302 1 1509 204 10 10 chr17 1251565 1251686 -88252867 - AluJb SINE Alu -178 134 14 2064 110 48 14 chr17 1251857 1252147 -88252406 + AluSx SINE Alu 1 300 -12 2239 120 0 3 chr17 1252152 1252461 -88252092 + AluSx SINE Alu 1 308 -4 603 229 76 0 chr17 1252473 1252617 -88251936 + FRAM SINE Alu 1 155 -21 1332 209 77 33 chr17 1252617 1253047 -88251506 + L1MB4 LINE L1 5598 6046 -134 2331 53 0 0 chr17 1253148 1253437 -88251116 + AluY SINE Alu 18 306 0 1128 192 77 86 chr17 1253748 1253966 -88250587 + L1MB8 LINE L1 5827 6045 -133 2438 83 3 10 chr17 1253966 1254279 -88250274 - AluY SINE Alu 0 311 1 2335 105 0 7 chr17 1254280 1254586 -88249967 - AluSx SINE Alu -8 304 1 1128 192 77 86 chr17 1254586 1254714 -88249839 + L1MB8 LINE L1 6044 6172 -6 225 382 7 15 chr17 1254803 1254939 -88249614 - MIR SINE MIR -36 226 92 1459 167 16 4 chr17 1255151 1255396 -88249157 - AluSx SINE Alu -64 248 1 461 172 255 0 chr17 1255745 1255889 -88248664 - MER58B DNA MER1_type 0 341 45 998 135 0 27 chr17 1255897 1256045 -88248508 + AluJo SINE Alu 1 144 -168 198 0 0 0 chr17 1256049 1256071 -88248482 + (A)n Simple_repeat Simple_repeat 1 22 0 1446 108 0 5 chr17 1256079 1256264 -88248289 + AluSq SINE Alu 2 185 -128 1348 162 0 0 chr17 1256364 1256568 -88247985 + AluSp SINE Alu 105 308 -5 568 187 14 29 chr17 1256568 1256707 -88247846 - L1MC3 LINE L1 -37 7748 7612 1291 156 0 0 chr17 1256707 1256899 -88247654 + AluJo SINE Alu 104 295 -17 2260 97 10 7 chr17 1256901 1257201 -88247352 + AluSx SINE Alu 1 301 -11 2458 84 3 3 chr17 1257633 1257943 -88246610 + AluSx SINE Alu 1 310 -2 290 297 72 0 chr17 1258007 1258118 -88246435 + MLT1K LTR MaLR 168 286 -302 477 263 60 65 chr17 1258205 1258422 -88246131 + MLT1K LTR MaLR 346 561 -27 1488 123 0 31 chr17 1258511 1258738 -88245815 - AluSg/x SINE Alu 0 312 93 1761 164 21 3 chr17 1258740 1259026 -88245527 - AluJb SINE Alu -15 297 7 1058 63 8 0 chr17 1259348 1259475 -88245078 + AluY SINE Alu 3 130 -181 1098 179 56 0 chr17 1259503 1259698 -88244855 - AluJb SINE Alu -22 290 85 2093 128 42 0 chr17 1260112 1260401 -88244152 + AluSx SINE Alu 1 301 -11 2592 74 0 0 chr17 1260401 1260712 -88243841 + AluY SINE Alu 1 311 0 285 186 0 58 chr17 1260760 1260846 -88243707 + L1MEd LINE L1 22 102 -6017 455 200 0 0 chr17 1261335 1261415 -88243138 - AluJb SINE Alu -96 216 137 1697 182 7 0 chr17 1261415 1261701 -88242852 - AluSq SINE Alu -4 309 22 2498 66 0 10 chr17 1261833 1262137 -88242416 - AluY SINE Alu -10 301 1 1144 148 0 0 chr17 1262140 1262309 -88242244 - FRAM SINE Alu -12 164 1 1200 160 104 76 chr17 1262653 1262941 -88241612 + AluJb SINE Alu 1 296 -16 1861 144 10 17 chr17 1263193 1263329 -88241224 + AluJb SINE Alu 1 136 -176 2072 130 10 0 chr17 1263329 1263628 -88240925 + AluSg1 SINE Alu 1 302 -7 1861 144 10 17 chr17 1263628 1263783 -88240770 + AluJb SINE Alu 136 290 -22 2298 79 10 3 chr17 1263903 1264194 -88240359 - AluSg SINE Alu -17 293 1 2370 84 3 0 chr17 1264447 1264746 -88239807 + AluY SINE Alu 1 300 -11 2187 114 3 0 chr17 1265675 1265974 -88238579 + AluY SINE Alu 1 300 -11 2148 101 13 20 chr17 1266290 1266596 -88237957 - AluSq SINE Alu -4 309 6 2441 93 0 0 chr17 1266706 1267006 -88237547 - AluSg SINE Alu -10 300 1 2381 82 0 10 chr17 1267029 1267332 -88237221 - AluSx SINE Alu -12 300 1 596 172 0 97 chr17 1267396 1267470 -88237083 + FLAM_A SINE Alu 2 57 -245 1668 181 31 0 chr17 1267470 1267758 -88236795 - AluSx SINE Alu -15 297 1 596 172 0 97 chr17 1267758 1267828 -88236725 + FLAM_A SINE Alu 57 132 -170 1451 215 29 26 chr17 1267828 1268139 -88236414 + AluJo SINE Alu 1 312 0 299 242 290 11 chr17 1268389 1268544 -88236009 + MIR SINE MIR 11 121 -141 2173 124 13 0 chr17 1268544 1268850 -88235703 + AluSx SINE Alu 1 310 -2 299 242 290 11 chr17 1268850 1268880 -88235673 + MIR SINE MIR 121 248 -14 454 111 0 0 chr17 1269007 1269070 -88235483 + AluJ/FLAM SINE Alu 4 66 -246 324 148 0 0 chr17 1269163 1269217 -88235336 + AluJ/FRAM SINE Alu 216 269 -33 393 143 14 29 chr17 1269635 1269705 -88234848 - AluJ/FLAM SINE Alu -233 69 1 625 261 38 0 chr17 1269712 1269869 -88234684 - FAM SINE Alu -12 163 1 1103 165 42 24 chr17 1269902 1270114 -88234439 + AluY SINE Alu 84 299 -12 2283 82 6 32 chr17 1270114 1270429 -88234124 + AluSp SINE Alu 1 307 -6 2507 58 7 0 chr17 1270438 1270732 -88233821 + AluY SINE Alu 1 296 -15 1151 81 0 0 chr17 1271498 1271634 -88232919 - AluSc SINE Alu -173 136 1 2519 50 0 7 chr17 1272162 1272464 -88232089 - AluY SINE Alu -11 300 1 2293 106 0 25 chr17 1273168 1273488 -88231065 - AluSx SINE Alu 0 312 1 1078 166 0 117 chr17 1273653 1273719 -88230834 + AluJb SINE Alu 66 138 -174 2400 77 0 7 chr17 1273719 1274016 -88230537 + AluSg SINE Alu 1 295 -15 2430 80 6 13 chr17 1274020 1274333 -88230220 + AluY SINE Alu 1 311 0 1078 166 0 117 chr17 1274333 1274437 -88230116 + AluJb SINE Alu 141 206 -106 2115 128 0 10 chr17 1274437 1274742 -88229811 + AluSx SINE Alu 1 302 -10 1078 166 0 117 chr17 1274742 1274812 -88229741 + AluJb SINE Alu 206 283 -29 2104 134 3 0 chr17 1274814 1275112 -88229441 + AluSx SINE Alu 3 301 -11 21 0 0 0 chr17 1275186 1275207 -88229346 + AT_rich Low_complexity Low_complexity 1 21 0 1042 201 52 81 chr17 1275207 1275275 -88229278 + AluJo SINE Alu 1 69 -233 1866 168 11 0 chr17 1275275 1275560 -88228993 + AluJb SINE Alu 9 296 -16 1884 160 0 3 chr17 1275562 1275862 -88228691 + AluJb SINE Alu 1 299 -13 1042 201 52 81 chr17 1275862 1275929 -88228624 + AluJo SINE Alu 70 137 -165 2305 82 0 7 chr17 1275929 1276221 -88228332 + AluSg1 SINE Alu 1 290 -19 1042 201 52 81 chr17 1276221 1276390 -88228163 + AluJo SINE Alu 137 300 -2 446 176 11 11 chr17 1276395 1276486 -88228067 + FLAM_A SINE Alu 35 125 -17 1646 168 51 10 chr17 1276491 1276783 -88227770 + AluJb SINE Alu 1 304 -8 1305 159 151 4 chr17 1276809 1276967 -88227586 - AluJo SINE Alu -24 288 155 219 36 0 0 chr17 1276967 1276995 -88227558 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 1305 159 151 4 chr17 1276995 1277087 -88227466 - AluJo SINE Alu -157 155 1 780 159 0 8 chr17 1277089 1277221 -88227332 - FLAM_C SINE Alu -2 131 1 1582 169 3 71 chr17 1277222 1277404 -88227149 - AluJo SINE Alu -4 308 156 2570 61 0 0 chr17 1277404 1277701 -88226852 - AluY SINE Alu -14 297 1 1582 169 3 71 chr17 1277701 1277844 -88226709 - AluJo SINE Alu -156 156 5 1805 162 27 7 chr17 1277855 1278152 -88226401 - AluJb SINE Alu -9 303 1 2274 67 0 21 chr17 1278318 1278603 -88225950 + AluY SINE Alu 1 279 -32 1366 168 82 8 chr17 1278603 1278859 -88225694 + AluJb SINE Alu 9 283 -29 1987 169 0 0 chr17 1279289 1279585 -88224968 + AluJb SINE Alu 1 296 -16 2261 94 0 39 chr17 1279753 1280060 -88224493 + AluSx SINE Alu 1 295 -17 781 173 0 0 chr17 1280368 1280501 -88224052 + FLAM_A SINE Alu 1 133 0 230 136 23 0 chr17 1281814 1281858 -88222695 + CT-rich Low_complexity Low_complexity 3 47 0 757 207 23 52 chr17 1281898 1282072 -88222481 + AluJb SINE Alu 3 171 -141 189 196 0 0 chr17 1282228 1282274 -88222279 + T-rich Low_complexity Low_complexity 1 46 0 1977 143 31 0 chr17 1282368 1282662 -88221891 + AluJb SINE Alu 1 303 -9 1156 168 0 0 chr17 1282935 1283108 -88221445 + AluJb SINE Alu 137 309 -3 2330 80 3 10 chr17 1283578 1283879 -88220674 - AluSx SINE Alu -13 299 1 1506 114 59 62 chr17 1284293 1284599 -88219954 + AluY SINE Alu 2 306 -5 183 179 26 0 chr17 1284631 1284670 -88219883 + MIR SINE MIR 106 145 -117 349 337 86 11 chr17 1285280 1285467 -88219086 - MIR SINE MIR -10 252 52 430 265 27 27 chr17 1285541 1285688 -88218865 + MIR SINE MIR 70 216 -46 2019 103 4 0 chr17 1285712 1285974 -88218579 + AluSx SINE Alu 1 263 -49 2367 101 0 0 chr17 1286001 1286307 -88218246 + AluSg SINE Alu 1 306 -4 710 276 47 41 chr17 1286309 1286649 -88217904 - MLT1J2 LTR MaLR -1 449 108 388 258 24 24 chr17 1286672 1286796 -88217757 - MLT1F LTR MaLR 0 542 419 2323 114 7 0 chr17 1286895 1287203 -88217350 + AluSg SINE Alu 1 310 0 2502 68 0 10 chr17 1287213 1287524 -88217029 + AluY SINE Alu 1 308 -3 226 311 0 0 chr17 1287586 1287660 -88216893 + L1M4 LINE L1 4645 4718 -1428 1692 128 120 0 chr17 1287884 1288150 -88216403 - AluJo SINE Alu -14 298 1 2199 100 13 19 chr17 1288213 1288523 -88216030 - AluSx SINE Alu -4 308 1 1166 59 0 0 chr17 1288523 1288658 -88215895 - AluSq/x SINE Alu -177 135 1 394 245 31 87 chr17 1289156 1289310 -88215243 - MIR SINE MIR -10 252 110 2393 94 0 7 chr17 1289310 1289619 -88214934 + AluSx SINE Alu 1 307 -5 394 245 31 87 chr17 1289619 1289660 -88214893 - MIR SINE MIR -152 110 68 839 116 14 43 chr17 1290033 1290171 -88214382 - AluJb SINE Alu -178 134 1 2286 101 14 0 chr17 1290534 1290831 -88213722 + AluSg SINE Alu 1 301 -9 2498 87 0 3 chr17 1292436 1292747 -88211806 + AluSg SINE Alu 1 310 0 188 306 56 14 chr17 1293153 1293225 -88211328 + L2 LINE L2 3237 3311 -2 185 213 106 0 chr17 1293384 1293431 -88211122 + L2 LINE L2 3257 3308 -5 25 0 0 0 chr17 1294096 1294121 -88210432 + AT_rich Low_complexity Low_complexity 1 25 0 2157 117 0 13 chr17 1294242 1294541 -88210012 - AluSq SINE Alu -17 296 2 373 105 0 0 chr17 1294684 1294741 -88209812 + Alu SINE Alu 241 297 -5 2332 105 0 10 chr17 1294922 1295237 -88209316 - AluSx SINE Alu -2 310 1 185 182 0 45 chr17 1295237 1295272 -88209281 - L2 LINE L2 -10 3303 3269 * 186 212 242 0 chr17 1295244 1295310 -88209243 - MIR SINE MIR -11 251 170 1983 127 0 3 chr17 1295312 1295619 -88208934 - AluSp SINE Alu -7 306 1 1513 169 3 41 chr17 1295619 1295858 -88208695 - L1M3 LINE L1 -439 5732 5486 2020 106 0 3 chr17 1295858 1296186 -88208367 - AluSx SINE Alu 0 327 1 1524 170 35 14 chr17 1296191 1296479 -88208074 - AluJb SINE Alu -18 294 1 2196 91 7 0 chr17 1296484 1296780 -88207773 - AluY SINE Alu -13 298 1 1513 169 3 41 chr17 1296780 1296822 -88207731 - L1M3 LINE L1 -693 5478 5449 1116 210 25 43 chr17 1296950 1297127 -88207426 + L1M4 LINE L1 4490 4660 -1486 2128 110 0 0 chr17 1297127 1297426 -88207127 + AluSx SINE Alu 1 299 -13 1116 210 25 43 chr17 1297426 1297572 -88206981 + L1M4 LINE L1 4660 4807 -1339 1236 89 0 0 chr17 1297574 1297742 -88206811 + AluYa5 SINE Alu 136 303 -8 925 264 49 37 chr17 1297742 1297840 -88206713 + L1M4 LINE L1 4796 4891 -1255 2228 100 0 7 chr17 1297840 1298150 -88206403 + AluSx SINE Alu 1 308 -4 925 264 49 37 chr17 1298150 1298456 -88206097 + L1M4 LINE L1 4891 5205 -941 2223 77 3 0 chr17 1298457 1298743 -88205810 + AluSx SINE Alu 1 287 -25 180 0 0 0 chr17 1298743 1298763 -88205790 + (GA)n Simple_repeat Simple_repeat 2 21 0 300 206 59 0 chr17 1298789 1298857 -88205696 - MER5A DNA MER1_type -1 188 117 232 277 76 61 chr17 1299069 1299271 -88205282 - MIR SINE MIR -39 169 3 591 126 11 32 chr17 1299333 1299428 -88205125 + AluSq SINE Alu 77 169 -144 1359 139 18 118 chr17 1299714 1299905 -88204648 - AluJb SINE Alu -14 298 152 2411 62 0 0 chr17 1299905 1300210 -88204343 - AluY SINE Alu -6 305 1 1359 139 18 118 chr17 1300210 1300349 -88204204 - AluJb SINE Alu -160 152 1 2352 44 14 0 chr17 1300491 1300786 -88203767 + AluSq SINE Alu 1 299 -14 214 263 99 134 chr17 1300800 1300835 -88203718 + MER5B DNA MER1_type 6 41 -137 396 0 0 0 chr17 1300835 1300879 -88203674 + (CA)n Simple_repeat Simple_repeat 2 45 0 214 263 99 134 chr17 1300879 1301014 -88203539 + MER5B DNA MER1_type 41 170 -8 348 43 0 0 chr17 1301595 1301641 -88202912 + (CA)n Simple_repeat Simple_repeat 2 47 0 351 239 102 100 chr17 1301739 1302098 -88202455 + L1ME4a LINE L1 5710 6072 -49 2054 106 18 0 chr17 1302098 1302382 -88202171 - AluSq SINE Alu -24 289 1 351 239 102 100 chr17 1302382 1302432 -88202121 + L1ME4a LINE L1 6072 6120 -1 2177 110 0 0 chr17 1303316 1303615 -88200938 + AluSx SINE Alu 1 299 -13 470 117 9 126 chr17 1303636 1303682 -88200871 + MLT1A2 LTR MaLR 1 28 -346 2448 51 0 0 chr17 1303682 1303976 -88200577 + AluY SINE Alu 1 294 -17 470 117 9 126 chr17 1303976 1304040 -88200513 + MLT1A2 LTR MaLR 28 98 -276 1158 114 10 13 chr17 1304148 1304396 -88200157 + AluSg/x SINE Alu 87 300 -10 1688 142 7 14 chr17 1304396 1304678 -88199875 + AluSx SINE Alu 1 280 -32 321 149 0 0 chr17 1305133 1305180 -88199373 - U6 snRNA snRNA -60 47 1 2156 108 0 13 chr17 1305340 1305654 -88198899 - AluSx SINE Alu -2 310 1 511 208 15 69 chr17 1305796 1305926 -88198627 - L2 LINE L2 -4 3309 3187 574 107 49 74 chr17 1306381 1306503 -88198050 - FLAM_C SINE Alu -2 141 23 230 222 0 0 chr17 1306729 1306774 -88197779 + Charlie3 DNA MER1_type 1 45 -2665 * 526 68 0 40 chr17 1306755 1306829 -88197724 + Charlie3 DNA MER1_type 2636 2706 -4 402 130 0 39 chr17 1307146 1307223 -88197330 - Alu SINE Alu -2 309 236 418 185 37 0 chr17 1307240 1307321 -88197232 + FAM SINE Alu 91 174 -11 1671 85 8 24 chr17 1307347 1307594 -88196959 + AluSp SINE Alu 37 279 -34 684 117 162 0 chr17 1307595 1307706 -88196847 + AluSg1 SINE Alu 2 130 -179 1126 129 0 0 chr17 1307835 1307998 -88196555 + AluSg1 SINE Alu 137 299 -13 305 111 0 0 chr17 1308019 1308064 -88196489 + MLT1A2 LTR MaLR 1 45 -329 2229 63 3 3 chr17 1308065 1308352 -88196201 + AluY SINE Alu 1 287 -24 719 218 106 12 chr17 1308353 1308552 -88196001 + MLT1A2 LTR MaLR 186 363 -11 2107 101 0 26 chr17 1308600 1308908 -88195645 + AluSx SINE Alu 1 300 -12 507 212 26 0 chr17 1308912 1309025 -88195528 - L1MB5 LINE L1 -54 6120 6005 2012 110 0 17 chr17 1311008 1311309 -88193244 + AluSx SINE Alu 1 296 -16 324 0 0 0 chr17 1311351 1311387 -88193166 + (TG)n Simple_repeat Simple_repeat 2 37 0 454 73 0 15 chr17 1311387 1311455 -88193098 - L1PA10 LINE L1 -20 6148 6082 1895 93 15 4 chr17 1311558 1311827 -88192726 + AluY SINE Alu 28 299 -12 1276 172 9 122 chr17 1311827 1312164 -88192389 + AluSx SINE Alu 2 300 -2 2156 106 3 3 chr17 1312203 1312505 -88192048 - AluSg SINE Alu -8 302 1 1206 234 38 3 chr17 1312506 1312796 -88191757 - AluJb SINE Alu -12 300 1 1530 142 48 62 chr17 1312804 1313113 -88191440 - AluJo SINE Alu -7 305 1 2200 128 0 0 chr17 1313137 1313449 -88191104 - AluSx SINE Alu 0 312 1 693 303 170 30 chr17 1313499 1313568 -88190985 + L2 LINE L2 2301 2359 -955 1822 138 3 33 chr17 1313568 1313697 -88190856 + AluJb SINE Alu 2 133 -179 2222 88 0 41 chr17 1313697 1314015 -88190538 + AluY SINE Alu 1 305 -6 1955 113 10 17 chr17 1314015 1314316 -88190237 + AluSg1 SINE Alu 1 299 -10 1822 138 3 33 chr17 1314316 1314490 -88190063 + AluJb SINE Alu 131 297 -15 693 303 170 30 chr17 1314490 1314984 -88189569 + L2 LINE L2 2359 2943 -371 1842 152 0 0 chr17 1315261 1315388 -88189165 + AluSx SINE Alu 5 131 -181 2228 95 13 0 chr17 1315388 1315693 -88188860 + AluSx SINE Alu 1 309 -3 1842 152 0 0 chr17 1315693 1315855 -88188698 + AluSx SINE Alu 130 294 -18 1230 252 125 6 chr17 1315862 1316215 -88188338 - MLT1H LTR MaLR -2 547 153 2141 94 3 16 chr17 1316282 1316589 -88187964 + AluY SINE Alu 1 303 -8 249 173 19 19 chr17 1316705 1316757 -88187796 - MLT1H LTR MaLR -388 161 74 1438 199 0 4 chr17 1316786 1317063 -88187490 - AluJb SINE Alu -8 304 29 1984 134 0 0 chr17 1317070 1317362 -88187191 - AluSx SINE Alu -19 293 2 220 200 46 46 chr17 1317393 1317458 -88187095 + MER91 DNA MER1_type 126 190 0 839 238 69 14 chr17 1317663 1317940 -88186613 + L1MB8 LINE L1 5881 6172 -6 774 138 9 0 chr17 1317984 1318100 -88186453 - AluSq/x SINE Alu -195 118 2 226 292 71 0 chr17 1318215 1318328 -88186225 + L1MC5 LINE L1 7299 7419 -542 1679 83 8 12 chr17 1318356 1318596 -88185957 + AluY SINE Alu 60 298 -13 2371 90 3 0 chr17 1318673 1318985 -88185568 + AluSp SINE Alu 1 313 0 1044 95 0 0 chr17 1319001 1319138 -88185415 + AluSq/x SINE Alu 1 137 -176 2104 121 0 3 chr17 1319138 1319436 -88185117 + AluSx SINE Alu 1 297 -15 328 319 55 61 chr17 1319440 1319603 -88184950 + L1 LINE L1 4006 4167 -1979 2413 38 10 0 chr17 1319607 1319900 -88184653 + AluY SINE Alu 1 296 -15 1267 84 0 0 chr17 1319900 1320067 -88184486 + AluY SINE Alu 133 299 -12 320 290 18 129 chr17 1320067 1320131 -88184422 + L1 LINE L1 4270 4340 -1806 840 145 8 0 chr17 1320131 1320262 -88184291 + FLAM_C SINE Alu 1 132 -1 320 290 18 129 chr17 1320262 1320315 -88184238 + L1 LINE L1 4340 4397 -1749 2508 68 0 0 chr17 1320315 1320622 -88183931 + AluSx SINE Alu 1 307 -5 320 290 18 129 chr17 1320622 1320727 -88183826 + L1 LINE L1 4397 4468 -1678 2298 81 10 0 chr17 1320747 1321045 -88183508 + AluSx SINE Alu 1 301 -11 808 114 0 0 chr17 1321124 1321238 -88183315 + AluSq/x SINE Alu 1 114 -199 2265 93 3 7 chr17 1322256 1322566 -88181987 - AluY SINE Alu -2 309 1 2021 134 0 0 chr17 1322568 1322858 -88181695 - AluSx SINE Alu -22 290 1 312 302 0 6 chr17 1323133 1323302 -88181251 + C-rich Low_complexity Low_complexity 2 169 0 220 319 0 0 chr17 1323345 1323464 -88181089 + C-rich Low_complexity Low_complexity 3 121 0 331 307 0 6 chr17 1323488 1323664 -88180889 + C-rich Low_complexity Low_complexity 2 176 0 371 268 0 17 chr17 1323688 1324049 -88180504 + C-rich Low_complexity Low_complexity 1 354 0 253 311 149 70 chr17 1324183 1325093 -88179460 + L2 LINE L2 1812 2804 -510 2010 143 0 0 chr17 1325093 1325393 -88179160 - AluSx SINE Alu -12 300 1 253 311 149 70 chr17 1325393 1325447 -88179106 + L2 LINE L2 2804 2852 -462 272 331 13 76 chr17 1325466 1325536 -88179017 + MIR SINE MIR 113 186 -76 2533 97 8 53 chr17 1325536 1325703 -88178850 + THE1C LTR MaLR 1 174 -201 1759 125 0 0 chr17 1325703 1325959 -88178594 - AluSq SINE Alu -13 300 45 1866 95 0 0 chr17 1325960 1326203 -88178350 - AluSq SINE Alu -65 248 6 2533 97 8 53 chr17 1326203 1326426 -88178127 + THE1C LTR MaLR 173 375 0 272 331 13 76 chr17 1326426 1326512 -88178041 + MIR SINE MIR 186 259 -3 1657 94 17 0 chr17 1326744 1327014 -88177539 + AluSp SINE Alu 58 313 0 372 287 45 85 chr17 1327069 1327536 -88177017 + L2 LINE L2 2581 3059 -213 2213 93 10 0 chr17 1327803 1328103 -88176450 + AluY SINE Alu 1 303 -8 348 298 41 0 chr17 1328666 1328787 -88175766 + MIR SINE MIR 111 236 -26 214 175 0 0 chr17 1328788 1328828 -88175725 + (CAT)n Simple_repeat Simple_repeat 2 41 0 1525 118 14 0 chr17 1329264 1329485 -88175068 - AluSc SINE Alu -9 300 77 2153 102 7 0 chr17 1329487 1329781 -88174772 - AluSg SINE Alu -14 296 1 199 324 29 0 chr17 1330643 1330711 -88173842 + MIR3 SINE MIR 1 70 -138 2232 89 6 16 chr17 1330976 1331292 -88173261 - AluSq SINE Alu 0 313 1 2107 125 3 0 chr17 1331303 1331608 -88172945 - AluSx SINE Alu -6 306 1 1012 84 0 0 chr17 1331611 1331742 -88172811 - AluSq/x SINE Alu -181 131 1 189 316 26 13 chr17 1332167 1332243 -88172310 + MIR SINE MIR 20 96 -166 2233 109 0 3 chr17 1332390 1332703 -88171850 - AluSx SINE Alu 0 312 1 379 280 68 25 chr17 1332713 1332831 -88171722 - MLT1K LTR MaLR -263 325 203 216 0 0 0 chr17 1335248 1335272 -88169281 + (CA)n Simple_repeat Simple_repeat 2 25 0 309 308 2 2 chr17 1335906 1336014 -88168539 + MIR SINE MIR 58 148 -60 871 195 13 0 chr17 1336063 1336222 -88168331 + AluJb SINE Alu 72 232 -80 276 268 0 0 chr17 1336403 1336474 -88168079 + L2 LINE L2 3200 3270 -2 421 309 85 0 chr17 1336562 1336727 -88167826 - MIR SINE MIR -23 239 61 604 99 0 44 chr17 1336818 1336909 -88167644 + AluSq/x SINE Alu 22 108 -205 2222 76 17 7 chr17 1336973 1337274 -88167279 - AluSq SINE Alu -9 304 1 296 309 41 8 chr17 1337854 1337977 -88166576 + MIR3 SINE MIR 33 159 -49 586 250 22 67 chr17 1337983 1338038 -88166515 - MER5B DNA MER1_type -6 172 116 2036 111 17 3 chr17 1338038 1338326 -88166227 + AluSg SINE Alu 1 292 -18 586 250 22 67 chr17 1338326 1338450 -88166103 - MER5B DNA MER1_type -62 116 1 464 202 237 0 chr17 1338470 1338614 -88165939 + MER5A DNA MER1_type 4 180 -9 2264 72 0 0 chr17 1338636 1338901 -88165652 + AluSg SINE Alu 22 311 0 205 40 0 0 chr17 1338901 1338926 -88165627 + (GAAA)n Simple_repeat Simple_repeat 1 124 0 2146 109 7 23 chr17 1340241 1340544 -88164009 - AluSx SINE Alu -14 298 1 2207 102 3 29 chr17 1340908 1341223 -88163330 + AluSg SINE Alu 3 309 -1 385 133 0 0 chr17 1341224 1341284 -88163269 - HY3 scRNA scRNA -40 61 2 279 248 37 37 chr17 1341287 1341396 -88163157 - MLT1J LTR MaLR -294 217 109 1021 87 0 0 chr17 1341527 1341654 -88162899 + AluY SINE Alu 167 293 -18 253 343 0 0 chr17 1341668 1341735 -88162818 - L2 LINE L2 -1 3271 3205 190 298 18 0 chr17 1341826 1341883 -88162670 - L2 LINE L2 -252 3061 3004 2388 80 0 0 chr17 1342105 1342406 -88162147 + AluY SINE Alu 1 301 -10 1062 182 0 0 chr17 1342419 1342595 -88161958 + AluJb SINE Alu 137 312 0 309 279 23 0 chr17 1345360 1345446 -88159107 + MER103 DNA DNA 62 149 -17 2221 108 7 0 chr17 1345687 1345983 -88158570 - AluSx SINE Alu -11 301 4 2310 109 0 0 chr17 1347624 1347927 -88156626 - AluSg SINE Alu -7 303 1 2381 67 11 0 chr17 1348041 1348325 -88156228 - AluY SINE Alu -8 303 17 2503 69 0 0 chr17 1348873 1349163 -88155390 + AluSc SINE Alu 1 290 -19 309 281 49 0 chr17 1350075 1350157 -88154396 - L1ME4a LINE L1 -1 6120 6035 2441 81 0 0 chr17 1350170 1350468 -88154085 - AluSx SINE Alu -14 298 1 2209 110 0 3 chr17 1350815 1351116 -88153437 + AluSx SINE Alu 1 300 -12 2239 106 0 0 chr17 1351137 1351421 -88153132 + AluSg SINE Alu 1 284 -26 249 196 0 0 chr17 1351421 1351472 -88153081 + (CATATA)n Simple_repeat Simple_repeat 5 55 0 237 259 47 0 chr17 1351474 1351559 -88152994 + L1MC4 LINE L1 6614 6702 -1340 285 244 77 0 chr17 1351562 1351640 -88152913 + (TACG)n Simple_repeat Simple_repeat 4 87 0 265 322 0 0 chr17 1351640 1351730 -88152823 - L1MC4 LINE L1 -1339 6703 6614 343 177 21 104 chr17 1351730 1351826 -88152727 + L1MC4 LINE L1 6616 6703 -1339 333 337 11 0 chr17 1351799 1351894 -88152659 - L1MC4 LINE L1 -1340 6702 6607 * 357 24 0 0 chr17 1354182 1354224 -88150329 + (TG)n Simple_repeat Simple_repeat 1 42 0 441 36 0 0 chr17 1354322 1354377 -88150176 + (CAGCC)n Simple_repeat Simple_repeat 4 58 0 1582 161 0 0 chr17 1355097 1355339 -88149214 + AluJb SINE Alu 1 242 -70 1979 116 18 11 chr17 1355403 1355678 -88148875 + AluSx SINE Alu 1 277 -35 236 30 30 0 chr17 1355684 1355717 -88148836 + (CAAA)n Simple_repeat Simple_repeat 2 35 0 2299 120 3 0 chr17 1355786 1356094 -88148459 + AluSg SINE Alu 1 309 -1 1113 160 53 50 chr17 1356379 1356660 -88147893 + MER33 DNA MER1_type 1 282 -42 1441 86 0 0 chr17 1356662 1356836 -88147717 - AluSc SINE Alu -21 288 115 2491 81 0 0 chr17 1357307 1357617 -88146936 - AluSx SINE Alu -2 310 1 210 71 0 0 chr17 1358041 1358069 -88146484 + (ATTG)n Simple_repeat Simple_repeat 4 31 0 2153 79 0 7 chr17 1358069 1358349 -88146204 - AluSg SINE Alu -32 278 1 1975 130 40 13 chr17 1359036 1359337 -88145216 - AluJb SINE Alu -3 309 1 323 243 37 28 chr17 1359337 1359388 -88145165 - Tigger8 DNA MER2_type -418 248 199 1876 101 4 26 chr17 1359388 1359656 -88144897 + AluSg SINE Alu 43 304 -6 323 243 37 28 chr17 1359656 1359711 -88144842 - Tigger8 DNA MER2_type -467 199 141 227 257 102 112 chr17 1359727 1359933 -88144620 + MIR SINE MIR 3 206 -56 1749 136 117 0 chr17 1360103 1360420 -88144133 + MER51B LTR ERV1 1 354 -23 2230 111 3 0 chr17 1360420 1360717 -88143836 + AluSq SINE Alu 1 298 -15 1150 120 14 14 chr17 1360717 1360925 -88143628 + L1P5 LINE L1 5322 5529 -622 2208 111 6 16 chr17 1360925 1361240 -88143313 + AluSx SINE Alu 1 312 0 955 84 8 0 chr17 1361241 1361360 -88143193 + AluSg/x SINE Alu 73 192 -118 1779 158 10 42 chr17 1361418 1361728 -88142825 + AluJb SINE Alu 1 300 -12 198 0 0 0 chr17 1361729 1361751 -88142802 + (CA)n Simple_repeat Simple_repeat 1 22 0 698 247 93 53 chr17 1361753 1362121 -88142432 + L1ME3A LINE L1 4118 4503 -1643 2548 65 0 0 chr17 1362121 1362431 -88142122 + AluY SINE Alu 1 310 -1 1442 244 56 11 chr17 1362431 1362877 -88141676 + L1ME LINE L1 5358 5823 -343 635 75 0 0 chr17 1362909 1362989 -88141564 + AluY SINE Alu 216 295 -16 507 192 96 81 chr17 1362989 1363187 -88141366 + L1ME3A LINE L1 4553 4753 -1393 257 293 120 7 chr17 1363225 1363375 -88141178 + L1ME3A LINE L1 4906 5072 -1074 2534 73 3 0 chr17 1363375 1363676 -88140877 + AluSq SINE Alu 1 302 -11 1260 98 0 0 chr17 1363676 1363839 -88140714 + AluSg/x SINE Alu 132 294 -16 599 270 82 28 chr17 1363841 1364239 -88140314 + L1ME3A LINE L1 5063 5478 -700 1362 188 0 103 chr17 1364258 1364453 -88140100 + AluJo SINE Alu 12 163 -149 2143 70 10 34 chr17 1364453 1364751 -88139802 + AluSq SINE Alu 11 301 -12 1362 188 0 103 chr17 1364751 1364875 -88139678 + AluJo SINE Alu 163 298 -14 892 246 147 22 chr17 1364887 1365482 -88139071 + L1ME3A LINE L1 5495 6166 -4 2051 140 7 0 chr17 1365520 1365820 -88138733 + AluJb SINE Alu 1 302 -10 2557 66 0 0 chr17 1366350 1366654 -88137899 + AluY SINE Alu 1 304 -7 223 282 59 35 chr17 1366784 1366869 -88137684 + MIR SINE MIR 56 142 -120 2532 43 0 7 chr17 1366976 1367275 -88137278 - AluY SINE Alu -14 297 1 203 371 57 19 chr17 1367343 1367448 -88137105 - L3 LINE CR1 -1222 355 247 2072 90 6 56 chr17 1368028 1368351 -88136202 - AluSq SINE Alu -6 307 1 2400 77 7 0 chr17 1368372 1368670 -88135883 - AluY SINE Alu -11 300 1 185 174 0 22 chr17 1369911 1369957 -88134596 + G-rich Low_complexity Low_complexity 5 49 0 21 0 0 0 chr17 1370492 1370513 -88134040 + AT_rich Low_complexity Low_complexity 1 21 0 674 148 85 170 chr17 1371862 1371912 -88132641 + AluJo SINE Alu 86 139 -173 2182 121 0 16 chr17 1371912 1372225 -88132328 + AluY SINE Alu 2 309 -2 674 148 85 170 chr17 1372225 1372252 -88132301 + AluJo SINE Alu 139 167 -145 2183 77 23 40 chr17 1372252 1372552 -88132001 + AluY SINE Alu 1 295 -16 674 148 85 170 chr17 1372552 1372696 -88131857 + AluJo SINE Alu 167 289 -23 366 291 26 8 chr17 1373803 1373920 -88130633 - FLAM_A SINE Alu -7 126 8 2332 94 0 10 chr17 1373950 1374257 -88130296 + AluY SINE Alu 1 304 -7 1900 140 3 3 chr17 1374269 1374555 -88129998 + AluY SINE Alu 1 286 -25 2443 57 3 7 chr17 1374826 1375122 -88129431 - AluY SINE Alu -16 295 1 658 171 54 31 chr17 1375126 1375255 -88129298 - AluSq/x SINE Alu -180 133 2 603 93 23 0 chr17 1375566 1375652 -88128901 + AluY SINE Alu 16 103 -208 1982 130 0 23 chr17 1375886 1376185 -88128368 + AluSx SINE Alu 1 292 -20 28 0 0 0 chr17 1376718 1376746 -88127807 + AT_rich Low_complexity Low_complexity 1 28 0 26 0 0 0 chr17 1377416 1377442 -88127111 + AT_rich Low_complexity Low_complexity 1 26 0 215 139 83 0 chr17 1377829 1377865 -88126688 - MIR SINE MIR -183 79 41 243 359 0 0 chr17 1377865 1377929 -88126624 - MIR SINE MIR -185 77 14 208 275 107 124 chr17 1378636 1378660 -88125893 + MIR3 SINE MIR 28 51 -157 2186 102 3 13 chr17 1378660 1378964 -88125589 - AluSq SINE Alu -5 308 8 208 275 107 124 chr17 1378964 1379172 -88125381 + MIR3 SINE MIR 51 204 -4 673 264 24 0 chr17 1379303 1379470 -88125083 - MER20 DNA MER1_type -48 171 1 2458 61 0 7 chr17 1379636 1379932 -88124621 - AluY SINE Alu -17 294 1 811 188 137 21 chr17 1379980 1380214 -88124339 - Tigger7 DNA MER2_type 0 2491 2231 429 165 89 13 chr17 1381239 1381318 -88123235 + AluJ/FLAM SINE Alu 2 86 -226 2046 127 16 13 chr17 1381342 1381650 -88122903 + AluSc SINE Alu 1 309 0 1804 169 24 0 chr17 1381664 1381960 -88122593 + AluSx SINE Alu 1 303 -9 2379 107 3 0 chr17 1382067 1382376 -88122177 + AluSx SINE Alu 1 310 -2 677 252 83 12 chr17 1382473 1382727 -88121826 + L1ME1 LINE L1 5554 5825 -341 1502 199 62 7 chr17 1382733 1382950 -88121603 + AluJo SINE Alu 7 243 -69 309 119 194 0 chr17 1382950 1383017 -88121536 - MADE1 DNA Mariner 0 80 1 1502 199 62 7 chr17 1383017 1383071 -88121482 + AluJo SINE Alu 243 293 -19 495 283 69 0 chr17 1383087 1383306 -88121247 + L1ME1 LINE L1 5813 6056 -115 2234 101 0 39 chr17 1383379 1383511 -88121042 + AluSx SINE Alu 5 141 -171 2186 99 43 7 chr17 1383511 1383813 -88120740 + AluSp SINE Alu 1 313 0 2234 101 0 39 chr17 1383813 1383988 -88120565 + AluSx SINE Alu 141 300 -12 312 247 104 52 chr17 1384282 1384436 -88120117 + L1ME4a LINE L1 5959 6120 -1 859 167 44 56 chr17 1384564 1384627 -88119926 - L1MB8 LINE L1 -5 6173 6111 1990 122 24 0 chr17 1384627 1384915 -88119638 + AluSg SINE Alu 1 295 -15 859 167 44 56 chr17 1384915 1385102 -88119451 - L1MB8 LINE L1 -67 6111 5926 1247 121 56 5 chr17 1385106 1385321 -88119232 - Tigger1 DNA MER2_type 0 2418 2193 1728 202 0 10 chr17 1385739 1386041 -88118512 - AluJb SINE Alu -13 299 1 2554 72 0 0 chr17 1386297 1386602 -88117951 - AluY SINE Alu -6 305 1 2280 109 3 3 chr17 1386613 1386916 -88117637 - AluSp SINE Alu -10 303 1 230 263 97 26 chr17 1388190 1388304 -88116249 - MER94 DNA DNA 0 134 13 722 157 75 41 chr17 1388468 1388615 -88115938 + AluJo SINE Alu 2 153 -159 987 218 12 68 chr17 1388624 1388708 -88115845 + AluJb SINE Alu 51 138 -174 1371 201 115 0 chr17 1388708 1388987 -88115566 + AluJb SINE Alu 2 312 0 987 218 12 68 chr17 1388987 1389154 -88115399 + AluJb SINE Alu 138 288 -24 2221 128 0 0 chr17 1389340 1389637 -88114916 + AluSq SINE Alu 1 297 -16 1015 129 6 35 chr17 1389693 1389864 -88114689 + AluJb SINE Alu 1 166 -146 286 151 0 0 chr17 1389865 1389947 -88114606 + Alu SINE Alu 244 280 -20 886 168 0 0 chr17 1389977 1390120 -88114433 + AluJb SINE Alu 167 309 -3 1907 138 3 10 chr17 1390208 1390504 -88114049 - AluSx SINE Alu -18 294 1 238 362 51 29 chr17 1390858 1390996 -88113557 + MIR3 SINE MIR 7 147 -61 1299 155 92 67 chr17 1391102 1391386 -88113167 + AluJo SINE Alu 1 291 -21 2130 129 7 0 chr17 1391456 1391758 -88112795 + AluSx SINE Alu 1 304 -8 1123 89 0 0 chr17 1391882 1392017 -88112536 + AluSq/x SINE Alu 1 135 -178 2103 96 0 4 chr17 1392017 1392287 -88112266 + AluSx SINE Alu 1 269 -43 2309 80 3 3 chr17 1392611 1392899 -88111654 + AluSq SINE Alu 4 291 -22 2060 114 3 17 chr17 1392909 1393208 -88111345 + AluSx SINE Alu 1 295 -17 2104 73 15 0 chr17 1393433 1393694 -88110859 - AluSp SINE Alu -48 265 1 1855 120 84 4 chr17 1393696 1393971 -88110582 - AluSx SINE Alu -15 297 1 2119 95 20 3 chr17 1397378 1397674 -88106879 - AluSq SINE Alu 0 313 13 835 130 0 0 chr17 1397690 1397805 -88106748 + AluJb SINE Alu 178 292 -20 444 214 58 19 chr17 1397818 1397921 -88106632 - FLAM_A SINE Alu -32 110 4 11890 37 5 31 chr17 1398223 1399642 -88104911 - SVA Other Other 0 1386 5 2261 110 10 0 chr17 1399643 1399943 -88104610 - AluSx SINE Alu -9 303 1 2273 116 0 0 chr17 1400180 1400482 -88104071 + AluSg SINE Alu 1 302 -8 403 286 91 15 chr17 1400482 1400681 -88103872 - L2 LINE L2 -1325 1989 1776 1715 106 0 30 chr17 1401366 1401495 -88103058 + AluSx SINE Alu 3 123 -189 2228 114 0 19 chr17 1401495 1401811 -88102742 + AluSg SINE Alu 1 310 0 1715 106 0 30 chr17 1401811 1401917 -88102636 + AluSx SINE Alu 123 231 -81 1070 77 0 0 chr17 1401917 1402047 -88102506 + AluSg/x SINE Alu 169 298 -12 1681 161 16 39 chr17 1402098 1402409 -88102144 + AluJo SINE Alu 7 310 -2 1531 199 21 3 chr17 1402437 1402719 -88101834 + AluJo SINE Alu 11 297 -15 2143 117 3 0 chr17 1402719 1403010 -88101543 + AluSg SINE Alu 1 292 -18 601 146 68 0 chr17 1403164 1403267 -88101286 - AluSq/x SINE Alu -202 111 2 230 324 178 14 chr17 1403793 1403972 -88100581 - MIR SINE MIR -10 252 31 2189 91 52 0 chr17 1403972 1404259 -88100294 + AluSx SINE Alu 1 302 -10 230 324 178 14 chr17 1404259 1404292 -88100261 - MIR SINE MIR -231 31 5 1642 178 4 7 chr17 1404878 1405153 -88099400 - AluJb SINE Alu -23 289 16 2227 108 3 16 chr17 1405402 1405708 -88098845 - AluSq SINE Alu -11 302 1 2515 68 0 0 chr17 1406312 1406604 -88097949 - AluSq SINE Alu -21 292 1 998 133 0 26 chr17 1406746 1406897 -88097656 - FRAM SINE Alu -19 157 11 321 309 138 0 chr17 1407031 1407154 -88097399 + MIR SINE MIR 8 147 -115 1926 144 46 0 chr17 1407157 1407442 -88097111 + AluSx SINE Alu 1 298 -14 583 139 0 10 chr17 1407772 1407873 -88096680 + FLAM_A SINE Alu 35 134 -8 423 142 9 26 chr17 1407942 1408055 -88096498 + CT-rich Low_complexity Low_complexity 1 111 0 535 259 119 16 chr17 1408233 1408418 -88096135 + MIR SINE MIR 21 224 -38 921 149 0 50 chr17 1409292 1409453 -88095100 + FAM SINE Alu 10 162 -23 2290 212 73 10 chr17 1409561 1410036 -88094517 + L1MB8 LINE L1 5270 5792 -386 1991 107 27 23 chr17 1410036 1410335 -88094218 - AluSx SINE Alu -12 300 1 2290 212 73 10 chr17 1410335 1410463 -88094090 + L1MB8 LINE L1 5792 5911 -267 6153 158 47 37 chr17 1410524 1410686 -88093867 + Tigger1 DNA MER2_type 20 179 -2239 2371 76 0 13 chr17 1410686 1410988 -88093565 - AluY SINE Alu -13 298 1 6153 158 47 37 chr17 1410988 1411109 -88093444 + Tigger1 DNA MER2_type 179 297 -2121 2238 93 7 7 chr17 1411109 1411410 -88093143 - AluSp SINE Alu -12 301 1 6153 158 47 37 chr17 1411410 1411429 -88093124 + Tigger1 DNA MER2_type 297 314 -2104 1771 121 70 4 chr17 1411429 1411686 -88092867 - AluJb SINE Alu -24 288 15 6153 158 47 37 chr17 1411686 1412233 -88092320 + Tigger1 DNA MER2_type 314 891 -1527 2237 101 7 10 chr17 1412233 1412531 -88092022 + AluSg SINE Alu 1 297 -13 6153 158 47 37 chr17 1412531 1412984 -88091569 + Tigger1 DNA MER2_type 891 1338 -1080 1591 189 7 7 chr17 1412986 1413256 -88091297 + AluJb SINE Alu 1 270 -42 262 250 98 0 chr17 1413408 1413500 -88091053 - LTR67 LTR ERVL -7 550 450 2197 95 7 7 chr17 1413510 1413805 -88090748 + AluSx SINE Alu 5 299 -13 1227 85 0 0 chr17 1414142 1414295 -88090258 + AluSg/x SINE Alu 147 299 -11 2074 122 3 3 chr17 1414902 1415196 -88089357 + AluSx SINE Alu 1 294 -18 39 0 0 0 chr17 1415522 1415561 -88088992 + GC_rich Low_complexity Low_complexity 1 39 0 2398 63 6 22 chr17 1415804 1416120 -88088433 - AluSx SINE Alu -1 311 1 2253 96 6 13 chr17 1416921 1417235 -88087318 - AluSx SINE Alu 0 312 1 21 36 0 0 chr17 1418050 1418078 -88086475 + GC_rich Low_complexity Low_complexity 1 28 0 2334 89 6 19 chr17 1420322 1420638 -88083915 + AluSx SINE Alu 1 312 0 663 263 29 15 chr17 1420752 1420957 -88083596 + MIR SINE MIR 52 259 -3 1568 131 26 4 chr17 1421504 1421733 -88082820 - AluJb SINE Alu -78 234 1 2561 49 19 7 chr17 1421754 1422061 -88082492 - AluY SINE Alu 0 311 1 1463 109 0 19 chr17 1422112 1422323 -88082230 + AluSg/x SINE Alu 88 294 -18 410 177 8 0 chr17 1422509 1422633 -88081920 + (TG)n Simple_repeat Simple_repeat 1 125 0 303 140 35 0 chr17 1422811 1422868 -88081685 - AluS SINE Alu -227 74 16 1604 151 60 43 chr17 1423178 1423312 -88081241 + AluSx SINE Alu 1 131 -181 2275 81 0 3 chr17 1423312 1423597 -88080956 + AluY SINE Alu 1 284 -27 405 0 0 0 chr17 1423597 1423642 -88080911 + (CA)n Simple_repeat Simple_repeat 2 46 0 1604 151 60 43 chr17 1423642 1423805 -88080748 + AluSx SINE Alu 130 304 -8 1123 126 0 63 chr17 1424102 1424277 -88080276 + AluSx SINE Alu 1 164 -148 2273 94 7 10 chr17 1424413 1424547 -88080006 + AluY SINE Alu 1 134 -177 2783 32 0 0 chr17 1424547 1424856 -88079697 + AluY SINE Alu 1 309 -2 2273 94 7 10 chr17 1424856 1425028 -88079525 + AluY SINE Alu 134 306 -5 2105 122 0 28 chr17 1425069 1425390 -88079163 + AluSx SINE Alu 1 312 0 318 254 101 0 chr17 1425394 1425532 -88079021 + L1 LINE L1 5181 5332 -814 822 187 0 0 chr17 1425532 1425671 -88078882 + FLAM_C SINE Alu 1 139 -4 671 166 37 18 chr17 1625671 1625834 -87878719 + L1MB3 LINE L1 5976 6141 -42 2271 82 0 0 chr17 1625835 1626129 -87878424 + AluSx SINE Alu 1 294 -18 775 157 0 0 chr17 1626162 1626283 -87878270 - FRAM SINE Alu -14 162 42 789 174 8 8 chr17 1626336 1626468 -87878085 + FLAM_C SINE Alu 2 133 -10 2167 100 0 7 chr17 1626474 1626774 -87877779 + AluSg SINE Alu 3 300 -10 1241 159 4 41 chr17 1627038 1627308 -87877245 - AluSq SINE Alu -53 260 1 1679 164 20 7 chr17 1627522 1627827 -87876726 - AluJo SINE Alu -3 309 1 657 158 0 0 chr17 1627990 1628091 -87876462 + AluJ/FLAM SINE Alu 2 102 -210 809 131 0 8 chr17 1628295 1628425 -87876128 + AluSp/q SINE Alu 168 296 -17 954 150 131 77 chr17 1628425 1628567 -87875986 - AluJo SINE Alu -20 292 159 2059 115 0 10 chr17 1628567 1628880 -87875673 - AluSg SINE Alu 0 310 1 954 150 131 77 chr17 1628880 1628997 -87875556 - AluJo SINE Alu -153 159 19 339 252 36 29 chr17 1629130 1629269 -87875284 - L1M4 LINE L1 -985 5161 5022 895 97 15 15 chr17 1629269 1629403 -87875150 + AluSq/x SINE Alu 1 134 -179 1988 99 3 66 chr17 1629455 1629788 -87874765 - AluSx SINE Alu 0 312 1 232 301 54 0 chr17 1629887 1629980 -87874573 + L1MC4a LINE L1 6080 6177 -1631 486 154 240 29 chr17 1630010 1630114 -87874439 + AluJb SINE Alu 2 127 -185 2032 108 0 7 chr17 1630241 1630538 -87874015 - AluSx SINE Alu -17 295 1 932 67 7 22 chr17 1630541 1630676 -87873877 - AluSq/x SINE Alu -180 133 1 372 281 221 15 chr17 1630683 1631014 -87873539 + L2 LINE L2 1693 2091 -1223 2155 80 0 13 chr17 1631075 1631376 -87873177 - AluSc SINE Alu -12 297 1 783 176 5 93 chr17 1631475 1631626 -87872927 + AluJb SINE Alu 137 269 -43 2277 68 7 3 chr17 1631626 1631934 -87872619 + AluY SINE Alu 1 309 -2 783 176 5 93 chr17 1631934 1631975 -87872578 + AluJb SINE Alu 269 312 0 496 291 104 33 chr17 1632189 1632494 -87872059 + L2 LINE L2 2736 3061 -211 2234 88 3 3 chr17 1632558 1632864 -87871689 - AluSg SINE Alu -4 306 1 398 286 24 52 chr17 1633070 1633280 -87871273 - L2 LINE L2 -211 3061 2858 2353 67 3 0 chr17 1633609 1633907 -87870646 + AluSx SINE Alu 1 299 -13 296 292 18 44 chr17 1633912 1634025 -87870528 + L2 LINE L2 3163 3272 0 2128 105 0 7 chr17 1634136 1634441 -87870112 - AluY SINE Alu -8 303 1 715 183 0 30 chr17 1634728 1634859 -87869694 - FLAM_C SINE Alu -15 128 2 259 318 67 72 chr17 1634953 1635148 -87869405 + L2 LINE L2 3001 3194 -78 1070 136 28 0 chr17 1635152 1635329 -87869224 - AluSg/x SINE Alu 0 310 129 1996 116 0 7 chr17 1635334 1635650 -87868903 - AluSx SINE Alu 0 314 1 241 95 71 0 chr17 1635862 1635904 -87868649 + L2 LINE L2 3264 3308 -5 2178 100 6 3 chr17 1635981 1636292 -87868261 - AluSq SINE Alu -1 312 1 235 270 50 0 chr17 1636300 1636400 -87868153 - L1P LINE L1 -781 5370 5266 442 179 0 13 chr17 1636559 1636637 -87867916 - FLAM_A SINE Alu -17 125 49 1758 159 37 7 chr17 1636702 1636997 -87867556 + AluJb SINE Alu 1 304 -8 248 268 0 18 chr17 1637012 1637068 -87867485 + AluSg/x SINE Alu 124 178 -122 327 167 95 36 chr17 1637137 1637221 -87867332 - L1MA9 LINE L1 0 6312 6224 2136 105 39 60 chr17 1637369 1637588 -87866965 - THE1C LTR MaLR -2 373 164 1912 137 0 19 chr17 1637588 1637903 -87866650 + AluSx SINE Alu 3 311 -1 2136 105 39 60 chr17 1637903 1638064 -87866489 - THE1C LTR MaLR -211 164 1 2080 113 0 0 chr17 1638159 1638451 -87866102 - AluSx SINE Alu -20 292 1 699 281 186 30 chr17 1638474 1638872 -87865681 - MLT1K LTR MaLR -10 578 119 791 271 42 42 chr17 1639018 1639093 -87865460 - L1M4 LINE L1 -1440 4706 4632 2186 63 0 78 chr17 1639093 1639427 -87865126 - AluY SINE Alu -3 308 1 791 271 42 42 chr17 1639427 1639728 -87864825 - L1M4 LINE L1 -1513 4633 4330 1124 107 0 34 chr17 1639751 1639928 -87864625 + AluSq SINE Alu 1 171 -142 892 239 83 73 chr17 1640108 1640267 -87864286 - HAL1 LINE L1 -5 2502 2346 1726 131 0 64 chr17 1640267 1640581 -87863972 - AluSx SINE Alu -18 294 1 2002 117 0 13 chr17 1640581 1640879 -87863674 - AluSx SINE Alu -18 294 1 892 239 83 73 chr17 1640879 1640990 -87863563 - HAL1 LINE L1 -161 2346 2238 1946 127 3 7 chr17 1640990 1641298 -87863255 - AluSp SINE Alu -6 307 1 892 239 83 73 chr17 1641298 1641544 -87863009 - HAL1 LINE L1 -269 2238 1979 1419 269 56 87 chr17 1641922 1641993 -87862560 + L1MC4 LINE L1 6875 6947 -1095 1553 165 3 32 chr17 1641993 1642302 -87862251 + AluJo SINE Alu 1 300 -12 1419 269 56 87 chr17 1642302 1642455 -87862098 + L1MC4 LINE L1 6947 7103 -939 2025 125 0 3 chr17 1642455 1642752 -87861801 + AluSx SINE Alu 1 296 -16 1419 269 56 87 chr17 1642752 1643166 -87861387 + L1MC4 LINE L1 7103 7529 -513 2152 106 0 0 chr17 1643166 1643469 -87861084 - AluSx SINE Alu -9 303 1 1419 269 56 87 chr17 1643469 1643596 -87860957 + L1MC4 LINE L1 7529 7658 -384 1400 143 68 34 chr17 1643596 1643889 -87860664 + AluJo SINE Alu 1 303 -9 1419 269 56 87 chr17 1643889 1644198 -87860355 + L1MC4 LINE L1 7658 7918 -124 311 224 247 52 chr17 1644198 1644372 -87860181 + LTR50 LTR ERVL 1 208 -587 856 170 78 61 chr17 1644387 1644481 -87860072 + L1M4 LINE L1 4934 5025 -1121 2185 60 23 10 chr17 1644481 1644780 -87859773 - AluY SINE Alu -8 303 1 856 170 78 61 chr17 1644780 1644915 -87859638 + L1M4 LINE L1 5025 5167 -979 1651 116 27 37 chr17 1644916 1645210 -87859343 + AluJb SINE Alu 1 291 -21 906 68 0 23 chr17 1645218 1645351 -87859202 + AluSq/x SINE Alu 1 130 -182 2230 97 7 0 chr17 1645478 1645787 -87858766 + AluY SINE Alu 1 311 0 2247 74 3 7 chr17 1645803 1646113 -87858440 + AluY SINE Alu 1 309 -2 432 0 0 0 chr17 1646444 1646492 -87858061 + (TA)n Simple_repeat Simple_repeat 2 49 0 387 133 0 112 chr17 1646494 1646592 -87857961 - LTR9 LTR ERV1 -90 522 436 2114 74 10 10 chr17 1646592 1646889 -87857664 - AluY SINE Alu -14 297 1 477 240 4 28 chr17 1646897 1647036 -87857517 + L1MD2 LINE L1 6235 7983 -12 1593 168 13 35 chr17 1647351 1647526 -87857027 - AluJo SINE Alu -9 303 137 2110 93 0 60 chr17 1647526 1647859 -87856694 - AluSp SINE Alu 0 313 1 1593 168 13 35 chr17 1647859 1647993 -87856560 - AluJo SINE Alu -175 137 1 246 32 0 0 chr17 1647996 1648027 -87856526 + (TTTTG)n Simple_repeat Simple_repeat 2 32 0 641 188 0 0 chr17 1648041 1648142 -87856411 - AluJ/FLAM SINE Alu -210 102 2 289 113 31 216 chr17 1648144 1648241 -87856312 - AluJo SINE Alu -159 143 65 854 107 0 0 chr17 1648256 1648378 -87856175 + AluSg/x SINE Alu 176 297 -15 406 93 0 0 chr17 1648379 1648433 -87856120 + Alu SINE Alu 2 55 -256 1897 97 3 58 chr17 1649720 1650030 -87854523 - AluY SINE Alu -18 293 1 2262 50 0 31 chr17 1650084 1650405 -87854148 + AluY SINE Alu 1 311 0 1832 140 0 37 chr17 1650420 1650741 -87853812 + AluSx SINE Alu 1 309 -3 351 267 168 31 chr17 1651158 1651319 -87853234 + MLT1K LTR MaLR 315 497 -91 795 163 0 8 chr17 1651327 1651456 -87853097 - FLAM_C SINE Alu -5 128 1 1384 171 36 26 chr17 1653027 1653331 -87851222 + AluJo SINE Alu 1 307 -5 1919 101 14 20 chr17 1653417 1653714 -87850839 + AluY SINE Alu 1 295 -16 1892 119 10 13 chr17 1654068 1654370 -87850183 + AluSx SINE Alu 1 301 -11 2252 97 0 3 chr17 1654449 1654760 -87849793 + AluSx SINE Alu 1 310 -2 1743 112 4 14 chr17 1655494 1655770 -87848783 - AluSg SINE Alu -7 303 31 1903 42 36 46 chr17 1655831 1656137 -87848416 + AluY SINE Alu 2 304 -7 377 210 49 0 chr17 1656607 1656688 -87847865 + L1ME LINE L1 5529 5613 -508 1011 139 0 18 chr17 1656741 1656906 -87847647 + FRAM SINE Alu 1 162 -4 2231 57 10 14 chr17 1657047 1657343 -87847210 - AluY SINE Alu -16 295 1 1629 151 21 0 chr17 1657371 1657662 -87846891 + AluSg SINE Alu 1 297 -13 423 227 62 39 chr17 1657793 1657921 -87846632 - L1MB7 LINE L1 -10 6174 6044 1362 172 50 17 chr17 1657930 1658227 -87846326 - AluJb SINE Alu -5 307 1 243 259 82 12 chr17 1658341 1658426 -87846127 - MLT1H LTR MaLR -50 499 409 973 230 65 21 chr17 1658458 1658749 -87845804 - MLT1H LTR MaLR -245 304 1 1166 114 12 0 chr17 1658844 1659010 -87845543 - AluSq SINE Alu -19 294 127 831 112 0 0 chr17 1659011 1659136 -87845417 + (TA)n Simple_repeat Simple_repeat 1 125 0 2265 78 0 34 chr17 1659136 1659458 -87845095 - AluY SINE Alu 0 311 1 288 293 99 26 chr17 1659787 1659978 -87844575 - L1M4 LINE L1 -1466 4680 4476 294 352 7 7 chr17 1659982 1660124 -87844429 - L1M4 LINE L1 -2313 3833 3692 483 91 0 0 chr17 1660239 1660305 -87844248 - FLAM SINE Alu -32 111 46 208 62 0 31 chr17 1660305 1660337 -87844216 + (TCTG)n Simple_repeat Simple_repeat 1 31 0 276 77 0 0 chr17 1660363 1660402 -87844151 + (TCTA)n Simple_repeat Simple_repeat 1 39 0 307 167 0 0 chr17 1660403 1660451 -87844102 - AluS SINE Alu -26 274 227 357 62 0 0 chr17 1660451 1660499 -87844054 + (TCTA)n Simple_repeat Simple_repeat 1 48 0 1821 117 0 18 chr17 1660500 1660781 -87843772 - AluSx SINE Alu -36 276 1 225 0 0 0 chr17 1660787 1660812 -87843741 + (T)n Simple_repeat Simple_repeat 1 25 0 388 231 51 8 chr17 1660905 1661022 -87843531 - L1ME4a LINE L1 -45 6076 5955 1751 140 3 29 chr17 1661180 1661487 -87843066 - AluJo SINE Alu -12 300 2 2079 94 0 17 chr17 1661496 1661793 -87842760 - AluSc SINE Alu -17 292 1 2268 93 0 0 chr17 1662789 1663090 -87841463 + AluSx SINE Alu 1 301 -11 1393 139 154 23 chr17 1663209 1663475 -87841078 - AluJb SINE Alu -1 301 1 845 128 0 47 chr17 1663553 1663688 -87840865 + FLAM_C SINE Alu 1 130 -182 1928 144 10 7 chr17 1663688 1663994 -87840559 + AluSx SINE Alu 1 307 -5 845 128 0 47 chr17 1663994 1664007 -87840546 + FLAM_C SINE Alu 130 142 -170 2206 56 42 7 chr17 1664065 1664352 -87840201 + AluY SINE Alu 1 297 -14 259 282 24 12 chr17 1664367 1664452 -87840101 - MIR SINE MIR -80 182 97 1003 106 0 59 chr17 1664566 1664736 -87839817 - AluSc SINE Alu -148 161 2 2217 79 0 13 chr17 1666306 1666610 -87837943 - AluY SINE Alu -11 300 1 180 0 0 0 chr17 1666696 1666716 -87837837 + (A)n Simple_repeat Simple_repeat 1 20 0 232 156 0 0 chr17 1666866 1666911 -87837642 + Alu SINE Alu 256 300 0 711 262 59 0 chr17 1666924 1667111 -87837442 + MIR SINE MIR 65 262 0 1703 166 13 10 chr17 1667130 1667437 -87837116 + AluJo SINE Alu 5 312 0 1809 81 37 7 chr17 1667794 1668094 -87836459 + AluSg SINE Alu 1 308 0 1926 98 13 36 chr17 1668430 1668735 -87835818 - AluSq SINE Alu -15 298 1 1919 114 21 7 chr17 1668823 1669113 -87835440 - AluSc SINE Alu -15 294 1 1903 117 21 24 chr17 1669120 1669410 -87835143 - AluSx SINE Alu -23 289 1 312 225 42 108 chr17 1669670 1669790 -87834763 + MIR SINE MIR 15 126 -136 402 276 68 44 chr17 1669936 1670073 -87834480 + L1ME LINE L1 5307 5452 -669 1538 140 51 27 chr17 1670073 1670365 -87834188 + AluSx SINE Alu 1 299 -13 402 276 68 44 chr17 1670365 1670408 -87834145 + L1ME LINE L1 5452 5492 -629 1910 135 0 10 chr17 1670471 1670767 -87833786 + AluSx SINE Alu 1 293 -19 29 0 0 0 chr17 1670767 1670796 -87833757 + AT_rich Low_complexity Low_complexity 1 29 0 2022 45 0 11 chr17 1670867 1671131 -87833422 - AluY SINE Alu -12 299 39 1475 253 54 83 chr17 1671150 1671844 -87832709 + L1MC4a LINE L1 5011 5724 -430 2122 105 3 0 chr17 1671844 1672140 -87832413 - AluSx SINE Alu -15 297 1 1475 253 54 83 chr17 1672140 1672280 -87832273 + L1MC4a LINE L1 5724 5343 -811 1609 111 0 137 chr17 1672280 1672622 -87831931 - AluSx SINE Alu -7 295 1 1475 253 54 83 chr17 1672622 1672729 -87831824 + L1MC4a LINE L1 5342 5451 -703 1375 274 116 18 chr17 1672901 1673520 -87831033 + L1ME4a LINE L1 5445 6120 -1 788 154 15 8 chr17 1674008 1674138 -87830415 - FLAM_C SINE Alu -11 132 2 2378 52 0 7 chr17 1674317 1674638 -87829915 - AluSg SINE Alu 0 319 1 2195 61 29 0 chr17 1674646 1674926 -87829627 - AluY SINE Alu -23 288 1 909 116 0 0 chr17 1674939 1675060 -87829493 - FLAM_C SINE Alu -12 121 1 1028 137 25 6 chr17 1675284 1675445 -87829108 + AluSx SINE Alu 61 224 -88 1137 151 16 68 chr17 1675445 1675522 -87829031 - AluJo SINE Alu -73 239 160 4678 138 44 5 chr17 1675522 1676278 -87828275 + LTR1 LTR ERV1 1 785 0 1137 151 16 68 chr17 1676278 1676452 -87828101 - AluJo SINE Alu -152 160 1 1994 142 0 0 chr17 1676614 1676916 -87827637 + AluSx SINE Alu 1 302 -10 1372 144 0 25 chr17 1677271 1677507 -87827046 - AluJb SINE Alu -24 288 59 2138 111 7 3 chr17 1677514 1677821 -87826732 - AluSx SINE Alu -4 308 1 2036 128 0 0 chr17 1677919 1678215 -87826338 - AluSx SINE Alu -16 296 1 413 141 99 91 chr17 1678332 1678403 -87826150 + L1MC4 LINE L1 7921 7995 -47 1698 141 24 14 chr17 1678403 1678693 -87825860 - AluSx SINE Alu -19 293 1 413 141 99 91 chr17 1678693 1678742 -87825811 + L1MC4 LINE L1 7995 8042 0 382 219 109 17 chr17 1678881 1679000 -87825553 + L1M4 LINE L1 2784 2913 -3233 2194 101 0 13 chr17 1679231 1679547 -87825006 - AluSx SINE Alu 0 312 1 841 123 8 0 chr17 1679550 1679680 -87824873 - AluSq/x SINE Alu -182 131 1 1907 123 24 7 chr17 1681770 1682062 -87822491 + AluSq SINE Alu 1 297 -16 2327 93 0 3 chr17 1682705 1683016 -87821537 - AluSx SINE Alu -2 310 1 1284 157 31 100 chr17 1683016 1683180 -87821373 - AluSq SINE Alu -5 298 165 225 0 0 0 chr17 1683180 1683205 -87821348 + (TTTTA)n Simple_repeat Simple_repeat 3 27 0 1284 157 31 100 chr17 1683205 1683359 -87821194 - AluSq SINE Alu -138 165 2 1206 127 0 64 chr17 1683529 1683812 -87820741 - AluSq SINE Alu -11 302 38 194 318 14 99 chr17 1684178 1684401 -87820152 + L2 LINE L2 2858 3061 -211 539 303 134 70 chr17 1685243 1685774 -87818779 + L2 LINE L2 1616 2230 -1084 1702 103 0 26 chr17 1685774 1686047 -87818506 - AluSx SINE Alu -46 266 1 539 303 134 70 chr17 1686047 1686423 -87818130 + L2 LINE L2 2230 2581 -733 2327 70 0 3 chr17 1686587 1686885 -87817668 - AluY SINE Alu -14 297 1 1780 104 0 83 chr17 1686885 1687222 -87817331 - AluSx SINE Alu -3 309 1 2182 107 0 0 chr17 1687378 1687678 -87816875 - AluSx SINE Alu -12 300 1 532 273 116 12 chr17 1687683 1687855 -87816698 + MIR SINE MIR 71 260 -2 22 0 0 0 chr17 1687892 1687914 -87816639 + AT_rich Low_complexity Low_complexity 1 22 0 1808 119 0 14 chr17 1687915 1688221 -87816332 - AluSg SINE Alu 0 302 1 399 232 8 72 chr17 1688231 1688356 -87816197 + L2 LINE L2 3197 3313 0 1955 124 24 7 chr17 1688569 1688867 -87815686 + AluSp SINE Alu 1 303 -10 1930 122 14 0 chr17 1688898 1689192 -87815361 + AluSx SINE Alu 1 298 -14 916 137 0 0 chr17 1689224 1689355 -87815198 - FLAM_C SINE Alu -2 131 1 331 212 111 12 chr17 1689717 1689808 -87814745 - MIR SINE MIR -20 188 89 1533 163 46 14 chr17 1689873 1690156 -87814397 - AluSx SINE Alu -20 292 1 1375 166 3 62 chr17 1690160 1690468 -87814085 - AluJo SINE Alu -22 290 1 2165 104 24 6 chr17 1690468 1690805 -87813748 - HSMAR2 DNA Mariner -958 344 2 669 172 0 33 chr17 1690852 1690974 -87813579 + FLAM_C SINE Alu 1 118 -15 1765 129 22 7 chr17 1691122 1691423 -87813130 - AluSx SINE Alu 0 305 1 2373 201 50 56 chr17 1691424 1691681 -87812872 - L1ME2 LINE L1 -34 6130 5873 1462 163 13 60 chr17 1691681 1691855 -87812698 - AluJo SINE Alu -18 294 138 2172 91 0 7 chr17 1691855 1692153 -87812400 - AluSc SINE Alu -13 296 1 1462 163 13 60 chr17 1692153 1692278 -87812275 - AluJo SINE Alu -174 138 9 2373 201 50 56 chr17 1692278 1693028 -87811525 - L1ME2 LINE L1 -291 5873 5120 2191 93 6 3 chr17 1693028 1693340 -87811213 + AluSq SINE Alu 1 313 0 2203 94 3 0 chr17 1693346 1693645 -87810908 + AluSp SINE Alu 5 304 -9 2373 201 50 56 chr17 1693645 1693862 -87810691 - L1ME2 LINE L1 -1049 5115 4865 2191 72 0 35 chr17 1693862 1694181 -87810372 - AluY SINE Alu -3 308 1 2373 201 50 56 chr17 1694181 1694348 -87810205 - L1ME2 LINE L1 -1299 4865 4699 1204 141 9 18 chr17 1694371 1694598 -87809955 - AluSx SINE Alu -29 283 59 257 274 61 61 chr17 1694653 1694898 -87809655 - L1ME2 LINE L1 -1958 4188 3944 464 139 0 0 chr17 1695380 1695452 -87809101 + AluS SINE Alu 2 73 -240 1982 96 13 20 chr17 1695466 1695768 -87808785 - AluY SINE Alu -11 300 1 460 283 75 0 chr17 1695768 1695927 -87808626 - L1M4 LINE L1 -1270 4876 4706 2136 117 3 0 chr17 1695929 1696238 -87808315 - AluSx SINE Alu -2 310 1 756 164 14 29 chr17 1696248 1696388 -87808165 - FRAM SINE Alu -15 161 24 1681 153 11 0 chr17 1696401 1696676 -87807877 - AluJb SINE Alu -3 309 32 1507 171 21 7 chr17 1696750 1696912 -87807641 - AluJo SINE Alu -13 299 130 2027 107 0 0 chr17 1696912 1697193 -87807360 - AluY SINE Alu -22 289 9 1507 171 21 7 chr17 1697193 1697316 -87807237 - AluJo SINE Alu -182 130 10 2032 213 95 131 chr17 1697328 1697399 -87807154 - L1M4 LINE L1 -1679 4467 4395 1984 121 13 10 chr17 1697399 1697706 -87806847 + AluSx SINE Alu 1 308 -4 2032 213 95 131 chr17 1697706 1697916 -87806637 - L1M4 LINE L1 -1751 4395 4179 1988 119 20 3 chr17 1697916 1698219 -87806334 - AluSx SINE Alu -4 308 1 2032 213 95 131 chr17 1698219 1698655 -87805898 - L1M4 LINE L1 -1967 4179 3682 715 141 16 25 chr17 1698655 1698776 -87805777 - FLAM_C SINE Alu -15 128 9 2032 213 95 131 chr17 1698776 1699132 -87805421 - L1M4 LINE L1 -2464 3682 3315 203 313 167 0 chr17 1699881 1699977 -87804576 - MER5A DNA MER1_type -1 188 77 213 303 107 73 chr17 1700022 1700237 -87804316 + L2 LINE L2 3021 3246 -26 405 0 0 0 chr17 1700237 1700282 -87804271 + (TTA)n Simple_repeat Simple_repeat 2 46 0 213 303 107 73 chr17 1700282 1700300 -87804253 + L2 LINE L2 3246 3262 -10 820 133 0 30 chr17 1701604 1701739 -87802814 - AluSq/x SINE Alu -180 132 2 351 0 0 0 chr17 1701814 1701853 -87802700 + (TG)n Simple_repeat Simple_repeat 2 40 0 1355 190 3 33 chr17 1701916 1702221 -87802332 + AluJo SINE Alu 9 304 -8 1094 135 0 16 chr17 1702363 1702548 -87802005 + AluSq SINE Alu 54 235 -78 1440 191 3 24 chr17 1702654 1702952 -87801601 + AluJo SINE Alu 13 304 -8 1531 198 0 6 chr17 1703040 1703353 -87801200 + AluJb SINE Alu 1 311 -1 643 175 175 35 chr17 1703467 1703695 -87800858 - HAL1b LINE L1 -702 646 387 1805 105 16 35 chr17 1703705 1704020 -87800533 - AluY SINE Alu -2 309 1 1834 95 46 18 chr17 1705149 1705433 -87799120 + AluSg SINE Alu 1 292 -18 856 231 64 8 chr17 1705443 1705677 -87798876 + L1MB7 LINE L1 5937 6183 -1 1920 90 4 11 chr17 1705742 1706009 -87798544 + AluSx SINE Alu 1 265 -47 1817 118 0 8 chr17 1706017 1706279 -87798274 - AluSg1 SINE Alu -49 260 1 1341 221 47 9 chr17 1706281 1706598 -87797955 - L1M4 LINE L1 -362 5822 5494 2525 49 0 0 chr17 1706702 1707008 -87797545 - AluY SINE Alu -4 307 2 400 326 144 26 chr17 1707009 1707279 -87797274 - L1M4 LINE L1 -1955 4191 3890 2251 102 0 0 chr17 1707307 1707602 -87796951 + AluSx SINE Alu 1 295 -17 1898 114 3 23 chr17 1707668 1707967 -87796586 + AluSx SINE Alu 1 293 -19 2068 104 14 0 chr17 1708042 1708329 -87796224 + AluSx SINE Alu 11 301 -11 1347 197 71 94 chr17 1708353 1708961 -87795592 - L1MC5 LINE L1 -30 7931 7338 451 246 143 29 chr17 1708964 1709139 -87795414 - L1M4 LINE L1 -2364 3782 3588 280 314 133 54 chr17 1709567 1710009 -87794544 - L2 LINE L2 -10 3303 2827 1923 129 0 10 chr17 1710838 1711133 -87793420 + AluSx SINE Alu 7 298 -14 181 264 0 38 chr17 1711394 1711447 -87793106 + L2 LINE L2 3222 3272 0 1264 189 4 15 chr17 1711871 1712131 -87792422 + AluJo SINE Alu 16 272 -40 395 337 51 10 chr17 1712151 1712347 -87792206 + L1M4 LINE L1 5189 5392 -754 2244 233 33 75 chr17 1712364 1712615 -87791938 - L1MEc LINE L1 -2056 4159 3899 1654 115 39 0 chr17 1712615 1712775 -87791778 - AluSx SINE Alu -19 293 118 300 27 0 0 chr17 1712775 1712812 -87791741 + (TG)n Simple_repeat Simple_repeat 2 38 0 1654 115 39 0 chr17 1712812 1712911 -87791642 - AluSx SINE Alu -194 118 24 2244 233 33 75 chr17 1712911 1713420 -87791133 - L1MEc LINE L1 -2316 3899 3431 1322 161 106 25 chr17 1713487 1713761 -87790792 + AluJb SINE Alu 1 296 -16 1856 120 0 20 chr17 1713761 1714060 -87790493 + AluSg SINE Alu 1 294 -16 28 111 0 0 chr17 1714066 1714147 -87790406 + AT_rich Low_complexity Low_complexity 1 81 0 826 107 0 9 chr17 1714147 1714259 -87790294 - AluSq/x SINE Alu -179 133 23 1258 202 86 5 chr17 1714326 1714697 -87789856 - L1MEc LINE L1 -2907 3308 2908 234 91 0 0 chr17 1714698 1714731 -87789822 + (T)n Simple_repeat Simple_repeat 1 33 0 2009 124 0 13 chr17 1715922 1716220 -87788333 - AluSx SINE Alu -13 299 6 1904 209 54 14 chr17 1716222 1716324 -87788229 - L1MEc LINE L1 -3287 2928 2832 1919 136 0 3 chr17 1716324 1716666 -87787887 - AluSx SINE Alu 0 341 1 1904 209 54 14 chr17 1716666 1717078 -87787475 - L1MEc LINE L1 -3383 2832 2392 1363 177 0 61 chr17 1717079 1717263 -87787290 - AluJb SINE Alu -1 311 117 180 97 0 0 chr17 1717263 1717294 -87787259 + (TTTA)n Simple_repeat Simple_repeat 2 32 0 2027 89 4 4 chr17 1717294 1717565 -87786988 - AluSc SINE Alu -28 281 11 1363 177 0 61 chr17 1717565 1717689 -87786864 - AluJb SINE Alu -193 119 21 834 147 61 25 chr17 1717747 1717910 -87786643 - AluJo SINE Alu -142 170 2 2507 271 46 21 chr17 1717910 1718758 -87785795 - L1MEc LINE L1 -5241 1155 287 565 296 8 46 chr17 1718948 1719188 -87785365 - HAL1 LINE L1 -25 2482 2252 1595 132 26 58 chr17 1719201 1719367 -87785186 - AluJo SINE Alu -11 301 148 2081 80 30 13 chr17 1719367 1719669 -87784884 - AluY SINE Alu -4 307 1 1595 132 26 58 chr17 1719669 1719813 -87784740 - AluJo SINE Alu -164 148 1 1913 132 4 0 chr17 1719891 1720197 -87784356 - AluSx SINE Alu 0 307 1 2237 73 16 7 chr17 1720197 1720499 -87784054 - AluSq SINE Alu -7 306 1 1396 183 20 40 chr17 1720503 1720666 -87783887 - AluJb SINE Alu -10 302 137 387 0 0 0 chr17 1720666 1720709 -87783844 + (TTTTA)n Simple_repeat Simple_repeat 2 44 0 2162 77 3 3 chr17 1720709 1720994 -87783559 - AluSx SINE Alu -27 285 1 1396 183 20 40 chr17 1720994 1721129 -87783424 - AluJb SINE Alu -173 139 9 2134 105 0 10 chr17 1721738 1722042 -87782511 + AluSq SINE Alu 2 302 -11 1752 87 4 16 chr17 1722155 1722408 -87782145 + AluSx SINE Alu 55 304 -8 279 203 101 29 chr17 1722408 1722477 -87782076 + AluSc SINE Alu 132 205 -94 242 281 104 67 chr17 1722591 1722726 -87781827 - MIR3 SINE MIR -9 199 60 343 266 60 54 chr17 1723091 1723275 -87781278 - L1MC4a LINE L1 -1748 6060 5876 822 191 0 0 chr17 1723298 1723424 -87781129 - FLAM_C SINE Alu -16 127 2 1693 168 0 13 chr17 1723450 1723753 -87780800 + AluJb SINE Alu 1 299 -13 1989 112 6 22 chr17 1723804 1724116 -87780437 - AluSx SINE Alu -5 307 1 850 122 0 41 chr17 1724117 1724264 -87780289 - AluSq/x SINE Alu -172 141 1 183 42 0 0 chr17 1724837 1724861 -87779692 + (TG)n Simple_repeat Simple_repeat 2 25 0 1679 178 0 19 chr17 1724929 1725244 -87779309 + AluJo SINE Alu 1 309 -3 1252 191 10 54 chr17 1725308 1725622 -87778931 + AluJb SINE Alu 3 302 0 1530 118 118 19 chr17 1726009 1726280 -87778273 + AluSg SINE Alu 1 298 -12 2084 86 0 20 chr17 1726781 1727084 -87777469 + AluSq SINE Alu 1 297 -16 502 316 62 29 chr17 1727549 1727793 -87776760 + MIR SINE MIR 11 262 0 1235 172 28 16 chr17 1727987 1728237 -87776316 - L1MB3 LINE L1 -7 6176 5924 1384 170 147 8 chr17 1730277 1730542 -87774011 - AluJo SINE Alu 0 302 1 2173 119 0 13 chr17 1731275 1731585 -87772968 + AluSx SINE Alu 1 306 -6 329 0 0 24 chr17 1731585 1731627 -87772926 + (TA)n Simple_repeat Simple_repeat 2 42 0 248 0 0 30 chr17 1731626 1731659 -87772894 + (CA)n Simple_repeat Simple_repeat 2 33 0 * 1710 149 13 30 chr17 1731818 1732119 -87772434 + AluJo SINE Alu 1 296 -16 21 0 0 0 chr17 1732228 1732249 -87772304 + AT_rich Low_complexity Low_complexity 1 21 0 2102 120 0 10 chr17 1733895 1734203 -87770350 + AluSx SINE Alu 1 305 -7 1939 126 0 23 chr17 1735577 1735879 -87768674 + AluSx SINE Alu 2 296 -16 1783 132 16 46 chr17 1740057 1740360 -87764193 + AluSx SINE Alu 1 294 -18 217 267 0 67 chr17 1740887 1740962 -87763591 - MIR SINE MIR -79 129 60 1357 95 11 0 chr17 1741666 1741855 -87762698 - AluSg/x SINE Alu -18 294 104 2108 71 0 14 chr17 1741855 1742136 -87762417 - AluSg SINE Alu -33 277 1 344 93 0 0 chr17 1742142 1742196 -87762357 - Alu SINE Alu -7 294 241 227 351 0 0 chr17 1742203 1742280 -87762273 + L2 LINE L2 3232 3308 -5 1967 85 50 7 chr17 1742430 1742712 -87761841 + AluSx SINE Alu 2 295 -17 327 250 179 18 chr17 1742724 1743090 -87761463 + L2 LINE L2 2765 3191 -122 474 266 112 115 chr17 1745047 1745333 -87759220 + L2 LINE L2 2985 3269 -3 2185 105 3 10 chr17 1745338 1745652 -87758901 - AluSx SINE Alu 0 312 1 1492 174 60 11 chr17 1745652 1745934 -87758619 - AluJb SINE Alu -15 297 2 2141 108 0 13 chr17 1746704 1747010 -87757543 + AluSq SINE Alu 1 302 -11 201 313 30 0 chr17 1747076 1747143 -87757410 + MIR SINE MIR 70 138 -70 2122 80 0 21 chr17 1747283 1747593 -87756960 - AluY SINE Alu 0 304 1 2127 105 0 13 chr17 1747593 1747898 -87756655 - AluSq SINE Alu -12 301 1 2169 90 3 39 chr17 1748481 1748622 -87755931 + AluSx SINE Alu 1 145 -167 2045 81 3 14 chr17 1748622 1748929 -87755624 + AluSc SINE Alu 1 304 0 2169 90 3 39 chr17 1748929 1749096 -87755457 + AluSx SINE Alu 145 299 -13 567 120 0 22 chr17 1749372 1749464 -87755089 + AluS SINE Alu 1 90 -222 1123 112 0 0 chr17 1749464 1749625 -87754928 - AluSg/x SINE Alu -18 294 134 1721 152 3 23 chr17 1749625 1749928 -87754625 - AluSg SINE Alu -13 297 1 307 350 105 35 chr17 1749935 1750135 -87754418 + L2 LINE L2 3099 3312 -1 2201 56 3 30 chr17 1750758 1751063 -87753490 - AluY SINE Alu -14 297 1 181 288 136 15 chr17 1751066 1751132 -87753421 - MER5A DNA MER1_type -115 74 1 2242 96 3 3 chr17 1752591 1752894 -87751659 - AluSp SINE Alu -10 303 1 2240 78 3 13 chr17 1753781 1754087 -87750466 - AluSp SINE Alu -10 303 1 258 258 176 0 chr17 1754987 1755128 -87749425 - MIR SINE MIR -75 187 13 212 214 5 88 chr17 1755467 1755659 -87748894 + CT-rich Low_complexity Low_complexity 3 178 0 230 263 0 59 chr17 1755737 1755889 -87748664 + CT-rich Low_complexity Low_complexity 4 146 0 227 226 11 74 chr17 1755967 1756157 -87748396 + CT-rich Low_complexity Low_complexity 3 180 0 224 195 0 103 chr17 1756322 1756517 -87748036 + CT-rich Low_complexity Low_complexity 3 177 0 985 81 0 29 chr17 1756673 1756809 -87747744 + FLAM_C SINE Alu 1 132 -1 694 289 56 5 chr17 1758287 1758484 -87746069 - MIR SINE MIR -28 234 28 2240 84 0 7 chr17 1760020 1760316 -87744237 - AluY SINE Alu -17 294 1 604 104 208 19 chr17 1760318 1760424 -87744129 - AluSg SINE Alu -179 131 6 2282 98 0 0 chr17 1760666 1760972 -87743581 - AluSg SINE Alu -4 306 1 330 309 81 7 chr17 1760996 1761132 -87743421 - MIR SINE MIR -110 152 7 328 217 29 0 chr17 1762049 1762118 -87742435 + MIR SINE MIR 76 146 -62 324 346 22 15 chr17 1762118 1762254 -87742299 - L2 LINE L2 0 3313 3177 2208 100 0 16 chr17 1763227 1763537 -87741016 - AluSx SINE Alu -6 306 2 1840 109 0 84 chr17 1763549 1763870 -87740683 - AluSg SINE Alu -16 294 1 900 91 0 8 chr17 1763880 1764001 -87740552 - FLAM_C SINE Alu -21 122 3 389 235 198 43 chr17 1764005 1764167 -87740386 - MIR3 SINE MIR -10 198 12 276 344 81 63 chr17 1765423 1765490 -87739063 + L2 LINE L2 2835 2899 -414 1985 108 0 91 chr17 1765490 1765831 -87738722 - AluSg SINE Alu 0 310 1 276 344 81 63 chr17 1765831 1766015 -87738538 + L2 LINE L2 2899 3078 -235 2321 86 0 3 chr17 1766015 1766316 -87738237 - AluSx SINE Alu -12 300 1 276 344 81 63 chr17 1766316 1766508 -87738045 + L2 LINE L2 3078 3287 -26 2393 66 3 0 chr17 1766537 1766842 -87737711 - AluY SINE Alu -5 306 1 186 43 0 0 chr17 1767077 1767100 -87737453 + (TCC)n Simple_repeat Simple_repeat 2 24 0 248 238 24 24 chr17 1770681 1770765 -87733788 + G-rich Low_complexity Low_complexity 3 86 0 328 282 48 19 chr17 1771532 1771635 -87732918 - L1MC4 LINE L1 -478 7564 7459 1732 107 0 8 chr17 1771635 1771878 -87732675 + AluSx SINE Alu 1 241 -71 226 280 16 80 chr17 1771935 1772060 -87732493 - MIR SINE MIR -40 222 106 2268 86 7 0 chr17 1772165 1772561 -87731992 + AluY SINE Alu 1 311 0 2274 99 0 10 chr17 1772960 1773273 -87731280 + AluSg SINE Alu 1 310 0 2192 97 7 7 chr17 1773309 1773619 -87730934 + AluSx SINE Alu 1 310 -2 227 302 52 10 chr17 1773724 1773820 -87730733 - MIR SINE MIR -4 258 159 2403 61 3 0 chr17 1773821 1774114 -87730439 - AluSp SINE Alu -19 294 1 1791 161 3 10 chr17 1774117 1774415 -87730138 - AluJb SINE Alu -13 299 4 900 156 12 24 chr17 1774420 1774587 -87729966 - AluJo/FRAM SINE Alu -1 301 137 1312 115 0 11 chr17 1774590 1774781 -87729772 - AluSp SINE Alu -19 294 106 2071 84 40 17 chr17 1775180 1775477 -87729076 - AluSx SINE Alu -8 304 1 255 333 20 10 chr17 1775490 1775589 -87728964 - MER5A DNA MER1_type -83 106 7 1547 154 110 4 chr17 1775986 1776259 -87728294 - AluSx SINE Alu -10 302 1 866 121 15 23 chr17 1776269 1776401 -87728152 - FLAM_C SINE Alu -2 131 1 2219 63 0 22 chr17 1776404 1776720 -87727833 - AluY SINE Alu 0 311 3 21 36 0 0 chr17 1776724 1776752 -87727801 + AT_rich Low_complexity Low_complexity 1 28 0 204 275 87 72 chr17 1776833 1776877 -87727676 - MIR SINE MIR -177 85 38 942 216 22 57 chr17 1776877 1777104 -87727449 + MER20 DNA MER1_type 1 219 0 204 275 87 72 chr17 1777104 1777128 -87727425 - MIR SINE MIR -224 38 16 2425 77 0 13 chr17 1777579 1777892 -87726661 + AluSx SINE Alu 1 309 -3 23 92 0 0 chr17 1780140 1780205 -87724348 + GC_rich Low_complexity Low_complexity 1 65 0 224 269 44 19 chr17 1781501 1781661 -87722892 + A-rich Low_complexity Low_complexity 4 167 0 555 176 29 0 chr17 1781708 1781810 -87722743 + AluSg/x SINE Alu 187 291 -18 1332 183 32 32 chr17 1782184 1782310 -87722243 + AluJo SINE Alu 1 126 -186 2198 70 10 30 chr17 1782310 1782609 -87721944 - AluSq SINE Alu -20 293 1 1332 183 32 32 chr17 1782609 1782766 -87721787 + AluJo SINE Alu 125 284 -28 38 0 0 0 chr17 1782766 1782804 -87721749 + AT_rich Low_complexity Low_complexity 1 38 0 516 153 82 0 chr17 1783904 1784002 -87720551 + FLAM_A SINE Alu 22 127 -15 4579 141 44 31 chr17 1784002 1784634 -87719919 - Tigger1 DNA MER2_type -194 2224 1576 1483 147 124 15 chr17 1784634 1784899 -87719654 - AluJb SINE Alu -18 294 1 4579 141 44 31 chr17 1784899 1785155 -87719398 - Tigger1 DNA MER2_type -842 1576 1325 338 95 16 79 chr17 1785155 1785218 -87719335 - Tigger1 DNA MER2_type -1035 1383 1325 3573 127 11 21 chr17 1785257 1785873 -87718680 - Tigger1 DNA MER2_type -1012 1406 797 577 91 0 0 chr17 1785877 1785954 -87718599 - AluJo SINE Alu -10 302 226 1050 157 56 6 chr17 1785954 1786132 -87718421 - AluJo SINE Alu -125 187 1 1136 101 22 6 chr17 1786132 1786310 -87718243 - Tigger1 DNA MER2_type -1614 804 624 1556 165 38 70 chr17 1786310 1786451 -87718102 - Tigger1 DNA MER2_type -2060 358 214 2330 87 0 13 chr17 1786451 1786750 -87717803 + AluSc SINE Alu 1 295 -14 1556 165 38 70 chr17 1786750 1786779 -87717774 - Tigger1 DNA MER2_type -2204 214 186 1983 125 0 27 chr17 1786779 1787075 -87717478 + AluSx SINE Alu 1 288 -24 1556 165 38 70 chr17 1787075 1787273 -87717280 - Tigger1 DNA MER2_type -2232 186 1 411 200 0 67 chr17 1787273 1787362 -87717191 + MER58B DNA MER1_type 259 341 0 1652 203 0 20 chr17 1788519 1788825 -87715728 - AluJb SINE Alu -12 300 1 195 42 0 0 chr17 1788832 1788856 -87715697 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2490 82 0 3 chr17 1788903 1789208 -87715345 + AluSq SINE Alu 1 304 -9 250 232 0 18 chr17 1789217 1789273 -87715280 + L1MB7 LINE L1 5559 5613 -508 1913 158 21 0 chr17 1789275 1789566 -87714987 + AluJb SINE Alu 1 297 -15 2263 93 0 13 chr17 1789568 1789869 -87714684 + AluY SINE Alu 1 297 -14 2051 94 0 11 chr17 1790649 1790924 -87713629 - AluSx SINE Alu -40 272 1 2170 99 7 3 chr17 1791216 1791500 -87713053 - AluSq SINE Alu -17 296 12 1561 202 0 38 chr17 1793074 1793391 -87711162 - AluJo SINE Alu -7 305 1 1934 146 14 7 chr17 1793397 1793691 -87710862 - AluSx SINE Alu -16 296 1 612 187 15 8 chr17 1793726 1793860 -87710693 - L1MB3 LINE L1 -1 6182 6048 354 264 0 0 chr17 1793860 1793947 -87710606 + L1MB7 LINE L1 5938 6024 -160 311 213 85 53 chr17 1793954 1794048 -87710505 - L1MB3 LINE L1 -147 6036 5940 275 143 111 0 chr17 1794459 1794522 -87710031 - MIR SINE MIR -102 160 91 217 132 0 0 chr17 1794555 1794593 -87709960 + (T)n Simple_repeat Simple_repeat 1 38 0 518 140 190 10 chr17 1794706 1794806 -87709747 + FLAM_A SINE Alu 1 118 -15 2200 75 14 11 chr17 1794891 1795213 -87709340 - AluSx SINE Alu 0 323 1 542 257 56 76 chr17 1795224 1795473 -87709080 - MIR SINE MIR -4 258 15 333 303 49 16 chr17 1795955 1796077 -87708476 + MIR3 SINE MIR 76 201 -7 2329 68 11 4 chr17 1799427 1799733 -87704820 - AluSg SINE Alu 0 308 1 2060 124 3 7 chr17 1799781 1800071 -87704482 + AluJo SINE Alu 1 289 -23 2251 119 0 3 chr17 1800085 1800387 -87704166 + AluSx SINE Alu 5 305 -7 2116 78 0 119 chr17 1800436 1800780 -87703773 - AluSc SINE Alu -6 303 1 1881 140 14 7 chr17 1800919 1801211 -87703342 + AluSx SINE Alu 1 294 -18 959 98 98 20 chr17 1801827 1801980 -87702573 - AluSg/x SINE Alu -19 291 127 2196 92 7 3 chr17 1801989 1802294 -87702259 - AluY SINE Alu 0 306 1 2257 87 37 7 chr17 1802306 1802604 -87701949 - AluSp SINE Alu -6 307 1 2359 94 0 19 chr17 1802981 1803299 -87701254 - AluSx SINE Alu 0 312 1 2550 43 7 10 chr17 1805557 1805862 -87698691 + AluSp SINE Alu 1 304 -9 2340 88 7 19 chr17 1810004 1810312 -87694241 - AluSq SINE Alu -6 307 4 2413 103 3 0 chr17 1810364 1810674 -87693879 + AluSx SINE Alu 1 311 -1 192 356 33 22 chr17 1811413 1811503 -87693050 + MIR SINE MIR 124 214 -48 283 356 7 34 chr17 1811735 1811881 -87692672 + L3 LINE CR1 1296 1437 -140 2325 89 0 13 chr17 1812228 1812541 -87692012 + AluSx SINE Alu 1 309 -3 604 231 62 59 chr17 1812666 1812967 -87691586 + MLT1C LTR MaLR 5 316 -151 1012 172 22 43 chr17 1812967 1813199 -87691354 + AluJb SINE Alu 86 312 0 744 176 13 13 chr17 1813199 1813352 -87691201 + MLT1C LTR MaLR 306 458 -9 399 21 0 0 chr17 1813646 1813694 -87690859 + (CA)n Simple_repeat Simple_repeat 1 48 0 2473 54 0 16 chr17 1813759 1814073 -87690480 + AluY SINE Alu 1 309 -2 2078 114 3 23 chr17 1814872 1815179 -87689374 - AluSg SINE Alu -9 301 1 202 278 0 28 chr17 1817767 1817839 -87686714 + CT-rich Low_complexity Low_complexity 2 71 0 1878 141 7 23 chr17 1819306 1819611 -87684942 + AluSx SINE Alu 1 300 -12 2294 96 0 13 chr17 1819967 1820270 -87684283 - AluSx SINE Alu -13 299 1 693 163 0 0 chr17 1820868 1820991 -87683562 + FLAM_A SINE Alu 4 126 -7 22 0 0 0 chr17 1820991 1821013 -87683540 + AT_rich Low_complexity Low_complexity 1 22 0 2166 92 0 11 chr17 1821026 1821310 -87683243 + AluSx SINE Alu 1 281 -31 2302 79 7 0 chr17 1821316 1821623 -87682930 + AluY SINE Alu 1 309 0 279 323 76 76 chr17 1871849 1872150 -87632403 - L2 LINE L2 -64 3208 2905 2314 102 0 0 chr17 1872150 1872453 -87632100 + AluSx SINE Alu 1 303 -9 279 323 76 76 chr17 1872453 1872547 -87632006 - L2 LINE L2 -366 2906 2813 2343 97 0 0 chr17 1873699 1874009 -87630544 + AluSx SINE Alu 1 310 -2 335 254 120 14 chr17 1874014 1874156 -87630397 - MIR3 SINE MIR -41 167 11 264 59 0 0 chr17 1875279 1875313 -87629240 + (CA)n Simple_repeat Simple_repeat 2 35 0 370 343 36 36 chr17 1876199 1876447 -87628106 + MIR SINE MIR 1 248 -14 2304 79 3 3 chr17 1879148 1879451 -87625102 - AluSx SINE Alu -9 303 1 1667 160 26 36 chr17 1879451 1879628 -87624925 - AluJb SINE Alu -9 303 129 2106 127 0 3 chr17 1879628 1879919 -87624634 + AluSx SINE Alu 1 290 -22 1667 160 26 36 chr17 1879919 1880047 -87624506 - AluJb SINE Alu -183 129 1 213 217 0 28 chr17 1881260 1881326 -87623227 + C-rich Low_complexity Low_complexity 1 64 0 23 33 0 0 chr17 1881990 1882020 -87622533 + GC_rich Low_complexity Low_complexity 1 30 0 231 236 0 0 chr17 1882917 1882989 -87621564 + CT-rich Low_complexity Low_complexity 3 74 0 437 330 157 22 chr17 1883810 1884077 -87620476 - L2 LINE L2 -6 3307 3005 2449 56 0 0 chr17 1884130 1884432 -87620121 + AluSg SINE Alu 1 302 -8 2166 99 26 0 chr17 1884438 1884740 -87619813 + AluSx SINE Alu 1 310 -2 239 298 96 0 chr17 1884939 1885033 -87619520 - L2 LINE L2 -217 3055 2953 757 140 0 66 chr17 1885098 1885234 -87619319 + FLAM_C SINE Alu 14 140 -3 264 274 36 24 chr17 1885422 1885506 -87619047 - MIR SINE MIR -76 132 48 1728 144 26 49 chr17 1886898 1887203 -87617350 + AluJo SINE Alu 1 298 -14 251 254 17 0 chr17 1888164 1888223 -87616330 - L2 LINE L2 -5 3267 3208 216 288 0 0 chr17 1888575 1888634 -87615919 + L2 LINE L2 3255 3313 0 1382 186 16 52 chr17 1888708 1888848 -87615705 + AluJo SINE Alu 1 144 -168 2374 74 0 16 chr17 1888848 1889157 -87615396 + AluSx SINE Alu 1 304 -8 1382 186 16 52 chr17 1889157 1889323 -87615230 + AluJo SINE Alu 144 296 -16 188 263 50 50 chr17 1889408 1889507 -87615046 + L2 LINE L2 3093 3191 -81 592 205 37 74 chr17 1890136 1890302 -87614251 - LTR39 LTR ERV1 0 783 623 2149 77 40 3 chr17 1890302 1890600 -87613953 - AluY SINE Alu -2 309 1 592 205 37 74 chr17 1890600 1890623 -87613930 - LTR39 LTR ERV1 -160 623 601 1088 174 59 41 chr17 1890751 1891021 -87613532 - LTR39 LTR ERV1 -508 275 1 273 57 0 135 chr17 1892014 1892155 -87612398 + (CCCCCT)n Simple_repeat Simple_repeat 2 123 0 536 110 0 94 chr17 1892169 1892360 -87612193 + (CCCCCT)n Simple_repeat Simple_repeat 2 174 0 216 217 0 33 chr17 1892372 1892432 -87612121 + C-rich Low_complexity Low_complexity 3 60 0 218 281 0 0 chr17 1894752 1894809 -87609744 - MIR SINE MIR -111 97 41 541 327 28 28 chr17 1895494 1895711 -87608842 + MIR SINE MIR 43 259 -3 1571 168 23 52 chr17 1895711 1896020 -87608533 + AluJb SINE Alu 1 300 -12 1687 181 87 0 chr17 1896118 1896428 -87608125 + MER1B DNA MER1_type 1 337 0 467 243 44 29 chr17 1896613 1896749 -87607804 - MIR3 SINE MIR -32 176 39 2287 85 0 0 chr17 1896749 1897043 -87607510 - AluY SINE Alu -16 295 2 2606 43 0 0 chr17 1897055 1897360 -87607193 - AluY SINE Alu -6 305 1 183 309 149 75 chr17 1898521 1898709 -87605844 - L2 LINE L2 -29 3284 3083 335 308 157 0 chr17 1898954 1899113 -87605440 + MIR SINE MIR 17 200 -62 25 0 0 0 chr17 1899277 1899302 -87605251 + GC_rich Low_complexity Low_complexity 1 25 0 1730 160 17 10 chr17 1901701 1901995 -87602558 - AluJb SINE Alu -11 301 6 1624 174 26 16 chr17 1902012 1902316 -87602237 - AluJb SINE Alu -5 307 1 326 245 47 9 chr17 1902850 1902956 -87601597 + Charlie8 DNA MER1_type 91 200 -2217 2156 110 10 0 chr17 1903347 1903647 -87600906 + AluSp SINE Alu 1 303 -10 1208 97 0 0 chr17 1903648 1903802 -87600751 + AluSg/x SINE Alu 135 288 -24 312 275 101 9 chr17 1903811 1903920 -87600633 + MER5A DNA MER1_type 71 189 0 2107 134 0 0 chr17 1904095 1904400 -87600153 - AluSx SINE Alu -7 305 1 2038 143 0 3 chr17 1904475 1904782 -87599771 + AluJo SINE Alu 1 306 -6 1228 140 0 0 chr17 1904783 1904961 -87599592 + AluSg/x SINE Alu 124 301 -9 207 130 74 0 chr17 1904962 1905016 -87599537 + (TA)n Simple_repeat Simple_repeat 1 58 0 1232 162 5 5 chr17 1905070 1905286 -87599267 - AluSg/x SINE Alu -12 300 85 1213 161 71 36 chr17 1905287 1905567 -87598986 - AluJo SINE Alu -22 290 1 1691 149 0 70 chr17 1905578 1905894 -87598659 - AluJb SINE Alu -18 294 1 21 0 0 0 chr17 1906300 1906321 -87598232 + GC_rich Low_complexity Low_complexity 1 21 0 251 294 69 10 chr17 1908532 1908634 -87595919 + MIR SINE MIR 112 219 -43 26 64 0 0 chr17 1908768 1908815 -87595738 + AT_rich Low_complexity Low_complexity 1 47 0 479 111 49 0 chr17 1908848 1908929 -87595624 - AluY SINE Alu -27 284 200 23 0 0 0 chr17 1909153 1909176 -87595377 + GC_rich Low_complexity Low_complexity 1 23 0 31 76 0 0 chr17 1910505 1910571 -87593982 + GC_rich Low_complexity Low_complexity 1 66 0 28 48 0 0 chr17 1911355 1911397 -87593156 + GC_rich Low_complexity Low_complexity 1 42 0 200 292 0 31 chr17 1912117 1912213 -87592340 + C-rich Low_complexity Low_complexity 3 95 0 27 62 0 0 chr17 1912531 1912579 -87591974 + GC_rich Low_complexity Low_complexity 1 48 0 1873 181 0 3 chr17 1915299 1915603 -87588950 + AluJb SINE Alu 6 308 -4 23 0 0 0 chr17 1915746 1915769 -87588784 + AT_rich Low_complexity Low_complexity 1 23 0 212 109 0 22 chr17 1915786 1915832 -87588721 + (TAGG)n Simple_repeat Simple_repeat 4 48 0 2123 100 13 3 chr17 1915852 1916151 -87588402 - AluSq SINE Alu -11 302 1 517 143 22 22 chr17 1916151 1916242 -87588311 - AluSg/x SINE Alu -7 302 212 454 346 64 40 chr17 1916705 1916976 -87587577 + L1MC4a LINE L1 5656 5838 -283 2576 39 3 3 chr17 1916977 1917287 -87587266 + AluYb8 SINE Alu 1 310 -8 429 218 58 11 chr17 1917301 1917475 -87587078 + L1MB7 LINE L1 4378 4559 -1587 315 254 10 62 chr17 1917533 1917685 -87586868 + L1MB7 LINE L1 4976 5093 -1053 1801 78 12 4 chr17 1917767 1918012 -87586541 + AluSg SINE Alu 44 290 -20 537 161 102 8 chr17 1918232 1918350 -87586203 - MER5A DNA MER1_type -33 156 28 283 182 0 0 chr17 1918377 1918390 -87586163 + MER3 DNA MER1_type 36 48 -161 674 210 114 0 chr17 1918390 1918557 -87585996 - MER3 DNA MER1_type -1 208 23 266 272 201 65 chr17 1918620 1918793 -87585760 + L3 LINE CR1 1188 1336 -241 1718 169 10 14 chr17 1918793 1919088 -87585465 - AluJo SINE Alu -18 294 1 266 272 201 65 chr17 1919088 1919252 -87585301 + L3 LINE CR1 1336 1571 -6 574 189 66 41 chr17 1919376 1919498 -87585055 - FLAM_A SINE Alu -6 136 12 588 166 134 16 chr17 1919521 1919708 -87584845 + L1MB7 LINE L1 5083 5291 -855 859 104 17 0 chr17 1919708 1919823 -87584730 + FLAM_C SINE Alu 1 117 -16 201 39 0 0 chr17 1919866 1919892 -87584661 + (TCTA)n Simple_repeat Simple_repeat 4 29 0 3889 150 36 31 chr17 1919892 1919947 -87584606 + L1MB7 LINE L1 5275 5328 -856 2444 64 0 13 chr17 1919947 1920258 -87584295 + AluSp SINE Alu 1 307 -6 3889 150 36 31 chr17 1920258 1921107 -87583446 + L1MB7 LINE L1 5328 6184 0 387 163 12 25 chr17 1921200 1921280 -87583273 - L1MA10 LINE L1 0 6334 6256 1193 202 4 16 chr17 1921288 1921395 -87583158 - AluJb SINE Alu -67 245 138 2248 92 0 25 chr17 1921395 1921712 -87582841 - AluSq SINE Alu -4 309 1 1193 202 4 16 chr17 1921712 1921852 -87582701 - AluJb SINE Alu -174 138 1 628 301 8 25 chr17 1921922 1922158 -87582395 - L1MEd LINE L1 -5424 695 464 396 313 57 83 chr17 1922179 1922447 -87582106 - L1MEd LINE L1 -5776 343 85 1510 147 41 57 chr17 1922447 1922761 -87581792 - AluSx SINE Alu -3 309 1 396 313 57 83 chr17 1922761 1922843 -87581710 - L1MEd LINE L1 -6034 85 2 253 108 0 0 chr17 1922882 1922919 -87581634 + Alu SINE Alu 5 41 -261 577 118 11 0 chr17 1922919 1923012 -87581541 + AluSg/x SINE Alu 215 308 -4 1613 155 13 79 chr17 1923894 1924211 -87580342 - AluSx SINE Alu -16 296 1 335 226 9 70 chr17 1924239 1924354 -87580199 - MIR SINE MIR -50 212 105 2180 93 0 0 chr17 1924466 1924745 -87579808 + AluSx SINE Alu 11 289 -23 743 203 0 0 chr17 1924804 1924927 -87579626 + FLAM_A SINE Alu 4 126 -7 3687 141 32 71 chr17 1925021 1925256 -87579297 + L1MB3 LINE L1 5374 5617 -566 1840 131 11 3 chr17 1925256 1925565 -87578988 + AluJb SINE Alu 1 311 0 3687 141 32 71 chr17 1925565 1925922 -87578631 + L1MB3 LINE L1 5617 5986 -197 1942 159 0 0 chr17 1925922 1926218 -87578335 + AluSx SINE Alu 1 296 -16 3687 141 32 71 chr17 1926218 1926413 -87578140 + L1MB3 LINE L1 5986 6131 -52 2302 101 0 0 chr17 1926413 1926720 -87577833 + AluSx SINE Alu 1 307 -5 3687 141 32 71 chr17 1926720 1926772 -87577781 + L1MB3 LINE L1 6131 6183 0 1950 155 9 40 chr17 1927368 1927716 -87576837 + MER1B DNA MER1_type 1 337 0 3382 203 66 21 chr17 1929740 1930428 -87574125 + L1ME1 LINE L1 5191 5932 -234 1048 90 229 5 chr17 1930428 1930616 -87573937 - MER30 DNA MER1_type 0 230 1 3382 203 66 21 chr17 1930616 1930842 -87573711 + L1ME1 LINE L1 5932 6146 -20 1567 172 46 4 chr17 1932112 1932373 -87572180 + AluJb SINE Alu 23 294 -18 2162 107 0 30 chr17 1932393 1932692 -87571861 - AluSx SINE Alu -15 297 8 25 0 0 0 chr17 1933376 1933401 -87571152 + AT_rich Low_complexity Low_complexity 1 25 0 2273 108 3 13 chr17 1933445 1933760 -87570793 + AluSq SINE Alu 1 312 -1 1955 156 7 3 chr17 1933981 1934282 -87570271 - AluJb SINE Alu -1 311 10 1283 164 5 0 chr17 1935973 1936174 -87568379 + AluJo SINE Alu 1 202 -110 2926 208 45 46 chr17 1936203 1936476 -87568077 + L1ME2 LINE L1 5152 5424 -740 2101 120 7 29 chr17 1936476 1936784 -87567769 + AluSx SINE Alu 1 301 -11 2926 208 45 46 chr17 1936784 1937514 -87567039 + L1ME2 LINE L1 5424 6148 -16 672 159 24 0 chr17 1937699 1937825 -87566728 + AluJb SINE Alu 2 130 -182 713 276 150 46 chr17 1937837 1937989 -87566564 - L1ME4a LINE L1 -6 6115 5980 234 0 0 0 chr17 1937989 1938015 -87566538 + (CA)n Simple_repeat Simple_repeat 2 27 0 713 276 150 46 chr17 1938015 1938069 -87566484 - L1ME4a LINE L1 -141 5980 5933 1832 190 3 0 chr17 1938069 1938379 -87566174 - AluJb SINE Alu -1 311 1 713 276 150 46 chr17 1938379 1938610 -87565943 - L1ME4a LINE L1 -188 5933 5631 1651 244 113 43 chr17 1939185 1939886 -87564667 + L2 LINE L2 2305 3067 -246 188 319 0 0 chr17 1939939 1939986 -87564567 - L2 LINE L2 -16 3256 3210 635 164 9 9 chr17 1940046 1940162 -87564391 - AluJ SINE Alu -16 296 181 633 91 20 20 chr17 1940165 1940264 -87564289 - AluSq SINE Alu -93 220 122 860 91 80 148 chr17 1940264 1940326 -87564227 - AluJ SINE Alu -137 175 110 2258 89 4 0 chr17 1940326 1940640 -87563913 + AluSg SINE Alu 1 315 0 860 91 80 148 chr17 1940640 1940752 -87563801 - AluJ SINE Alu -202 110 12 182 272 35 70 chr17 1940753 1940867 -87563686 - MIR SINE MIR -60 148 39 2090 114 37 23 chr17 1940895 1941194 -87563359 + AluSx SINE Alu 7 309 -3 1509 208 27 3 chr17 1941204 1941502 -87563051 + AluJo SINE Alu 1 305 -7 331 329 118 54 chr17 1941882 1942195 -87562358 - L1MEd LINE L1 -4922 1197 865 2176 105 3 25 chr17 1942214 1942528 -87562025 - AluSx SINE Alu -5 307 1 1641 215 0 3 chr17 1942612 1942905 -87561648 + AluJb SINE Alu 1 292 -20 2032 134 3 7 chr17 1943133 1943440 -87561113 - AluSx SINE Alu -6 306 1 1749 146 0 11 chr17 1943441 1943716 -87560837 - AluJo SINE Alu -6 306 35 586 138 107 16 chr17 1943767 1943926 -87560627 + MER46A DNA MER2_type 5 227 -9 474 218 9 36 chr17 1944304 1944414 -87560139 + MLT1D LTR MaLR 1 107 -398 2303 114 0 0 chr17 1944416 1944715 -87559838 - AluSx SINE Alu -13 299 1 1234 112 0 51 chr17 1944722 1944918 -87559635 - AluSg/x SINE Alu 0 312 127 2227 105 3 20 chr17 1944935 1945231 -87559322 - AluSq SINE Alu -18 295 5 1691 146 4 0 chr17 1945299 1945546 -87559007 - AluSx SINE Alu -21 291 44 612 271 38 55 chr17 1945594 1945886 -87558667 + L1M4 LINE L1 4076 4362 -1784 1814 165 28 3 chr17 1945891 1946182 -87558371 + AluJb SINE Alu 2 299 -13 1864 184 0 0 chr17 1946238 1946537 -87558016 + AluJo SINE Alu 1 299 -13 661 224 0 8 chr17 1946687 1946821 -87557732 - FLAM_A SINE Alu 0 133 1 2228 89 6 25 chr17 1946826 1947141 -87557412 - AluY SINE Alu -2 309 1 384 243 28 19 chr17 1947145 1947252 -87557301 - MIR SINE MIR -61 147 40 985 252 20 20 chr17 1949077 1949327 -87555226 - MIR SINE MIR -1 261 12 297 89 0 0 chr17 1951336 1951381 -87553172 + (CA)n Simple_repeat Simple_repeat 1 45 0 195 100 0 0 chr17 1951465 1951495 -87553058 + (GGGA)n Simple_repeat Simple_repeat 2 31 0 2138 130 10 0 chr17 1956108 1956415 -87548138 + AluSx SINE Alu 1 310 -2 2440 67 0 38 chr17 1957871 1958186 -87546367 - AluY SINE Alu -8 303 1 1981 89 4 8 chr17 1958188 1958447 -87546106 - AluSx SINE Alu -11 301 44 431 287 13 57 chr17 1958959 1959116 -87545437 + MIR SINE MIR 2 151 -111 2073 144 7 0 chr17 1959118 1959423 -87545130 + AluSx SINE Alu 1 307 -5 1052 174 14 55 chr17 1959423 1959642 -87544911 + AluJb SINE Alu 88 297 -15 191 317 17 0 chr17 1959646 1959706 -87544847 + MIR SINE MIR 190 250 -12 327 217 0 29 chr17 1959907 1959976 -87544577 - AluJ SINE Alu -39 263 197 737 154 46 23 chr17 1959981 1960111 -87544442 - AluJ SINE Alu -171 141 9 1926 139 42 3 chr17 1960455 1960743 -87543810 - AluSx SINE Alu -13 299 1 621 167 7 65 chr17 1960750 1960888 -87543665 - FLAM_C SINE Alu -12 131 2 239 202 85 53 chr17 1961667 1961761 -87542792 - L2 LINE L2 -3 3310 3214 1169 200 90 48 chr17 1962265 1962417 -87542136 - AluJo SINE Alu 0 302 158 2268 91 0 17 chr17 1962417 1962713 -87541840 - AluSx SINE Alu -21 291 1 1169 200 90 48 chr17 1962713 1962850 -87541703 - AluJo SINE Alu -144 158 1 187 147 44 103 chr17 1962901 1962961 -87541592 - L2 LINE L2 -9 3304 3247 252 0 0 0 chr17 1962961 1962989 -87541564 + (CAAGA)n Simple_repeat Simple_repeat 5 32 0 209 279 192 0 chr17 1963189 1963293 -87541260 - L3 LINE CR1 -22 1555 1432 1754 158 65 3 chr17 1963349 1963640 -87540913 - AluJb SINE Alu -3 309 1 509 258 151 82 chr17 1963718 1964184 -87540369 - L3 LINE CR1 -136 1441 932 1632 183 23 42 chr17 1964184 1964490 -87540063 - AluJb SINE Alu -12 300 1 509 258 151 82 chr17 1964490 1964561 -87539992 - L3 LINE CR1 -645 932 867 320 333 46 20 chr17 1964676 1964829 -87539724 - L3 LINE CR1 -720 857 701 2317 103 7 0 chr17 1964834 1965135 -87539418 - AluSq SINE Alu -10 303 1 219 254 0 17 chr17 1966016 1966075 -87538478 + MER5A DNA MER1_type 28 85 -104 1762 172 0 17 chr17 1966075 1966234 -87538319 - AluSx SINE Alu -20 292 139 1957 176 3 0 chr17 1966234 1966541 -87538012 - AluSx SINE Alu -4 308 1 1762 172 0 17 chr17 1966541 1966678 -87537875 - AluSx SINE Alu -173 139 1 1425 174 121 11 chr17 1966787 1967051 -87537502 - AluJb SINE Alu -19 293 1 649 150 0 0 chr17 1967055 1967155 -87537398 - AluJ/FLAM SINE Alu -211 101 2 2018 143 0 17 chr17 1967313 1967606 -87536947 - AluJo SINE Alu -24 288 1 640 283 59 0 chr17 1967871 1968058 -87536495 - MIR SINE MIR -4 258 61 2987 165 34 36 chr17 1968395 1968565 -87535988 - L1MA7 LINE L1 0 6291 6122 1790 155 3 48 chr17 1968565 1968874 -87535679 - AluJb SINE Alu -17 295 1 2987 165 34 36 chr17 1968874 1969371 -87535182 - L1MA7 LINE L1 -169 6122 5625 2454 80 0 0 chr17 1970155 1970454 -87534099 - AluY SINE Alu -12 299 1 1002 152 0 0 chr17 1970454 1970599 -87533954 - AluSq/x SINE Alu -168 145 1 238 294 327 20 chr17 1970910 1971063 -87533490 - MIR SINE MIR -62 200 1 826 178 20 13 chr17 1971129 1971281 -87533272 - AluJb SINE Alu -19 293 141 181 376 47 0 chr17 1971923 1972008 -87532545 + L3 LINE CR1 1485 1573 -4 666 197 0 0 chr17 1979128 1979275 -87525278 + (TG)n Simple_repeat Simple_repeat 1 147 0 369 0 0 0 chr17 1979535 1979576 -87524977 + (CA)n Simple_repeat Simple_repeat 2 42 0 205 250 0 0 chr17 1980543 1980587 -87523966 + G-rich Low_complexity Low_complexity 3 46 0 195 42 0 0 chr17 1982252 1982276 -87522277 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1435 143 0 5 chr17 1982281 1982504 -87522049 + AluJb SINE Alu 89 310 -2 256 244 25 50 chr17 1982690 1982809 -87521744 + MER113 DNA MER1_type? 5 120 -401 221 222 19 0 chr17 1985767 1985821 -87518732 + MIR SINE MIR 196 250 -12 2264 100 0 0 chr17 1985948 1986263 -87518290 - AluSx SINE Alu 0 316 2 216 0 0 0 chr17 1986267 1986291 -87518262 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2501 80 0 0 chr17 1986309 1986610 -87517943 + AluSg SINE Alu 1 301 -9 365 61 0 0 chr17 1986628 1986677 -87517876 + AluSq/x SINE Alu 87 135 -168 2076 129 0 14 chr17 1986677 1986971 -87517582 + AluSq SINE Alu 1 290 -23 1052 143 0 0 chr17 1986975 1987122 -87517431 - FRAM SINE Alu -30 146 1 243 321 21 57 chr17 1990255 1990448 -87514105 - L2 LINE L2 -213 3059 2874 771 181 94 7 chr17 1990562 1990711 -87513842 - FAM SINE Alu -13 162 1 354 211 26 0 chr17 1990711 1990787 -87513766 - MIR SINE MIR -112 150 73 194 357 29 14 chr17 1990794 1990934 -87513619 - L2 LINE L2 -452 2862 2721 232 315 110 0 chr17 1990996 1991069 -87513484 + MER91C DNA MER1_type 30 110 -30 2151 121 28 0 chr17 1991261 1991551 -87513002 - AluSq SINE Alu -15 298 1 2330 102 0 0 chr17 1991850 1992143 -87512410 - AluSx SINE Alu -19 293 1 1722 101 93 12 chr17 1992265 1992512 -87512041 + AluSc SINE Alu 34 300 -9 2341 89 0 0 chr17 1992672 1993003 -87511550 + AluSx SINE Alu 1 331 0 2104 141 3 0 chr17 1993022 1993327 -87511226 + AluSx SINE Alu 7 312 0 729 252 19 27 chr17 1993401 1993506 -87511047 - MIR SINE MIR -12 250 146 2474 88 0 3 chr17 1993506 1993814 -87510739 - AluSg SINE Alu -3 307 1 729 252 19 27 chr17 1993814 1993925 -87510628 - MIR SINE MIR -116 146 40 985 252 20 20 chr17 1995749 1995999 -87508554 - MIR SINE MIR -1 261 12 315 85 0 0 chr17 1998008 1998055 -87506498 + (CA)n Simple_repeat Simple_repeat 1 47 0 195 100 0 0 chr17 1998139 1998169 -87506384 + (GGGA)n Simple_repeat Simple_repeat 2 31 0 2211 133 3 0 chr17 2002781 2003090 -87501463 + AluSx SINE Alu 1 310 -2 2440 67 0 38 chr17 2004546 2004861 -87499692 - AluY SINE Alu -8 303 1 1981 89 4 8 chr17 2004863 2005122 -87499431 - AluSx SINE Alu -11 301 44 431 287 13 57 chr17 2005634 2005791 -87498762 + MIR SINE MIR 2 151 -111 2073 144 7 0 chr17 2005793 2006098 -87498455 + AluSx SINE Alu 1 307 -5 1052 174 14 55 chr17 2006098 2006317 -87498236 + AluJb SINE Alu 88 297 -15 191 317 17 0 chr17 2006321 2006381 -87498172 + MIR SINE MIR 190 250 -12 327 217 0 29 chr17 2006582 2006651 -87497902 - AluJ SINE Alu -39 263 197 743 155 47 16 chr17 2006656 2006785 -87497768 - AluJ SINE Alu -171 141 9 1926 139 42 3 chr17 2007129 2007417 -87497136 - AluSx SINE Alu -13 299 1 621 167 7 65 chr17 2007424 2007562 -87496991 - FLAM_C SINE Alu -12 131 2 239 202 85 53 chr17 2008341 2008435 -87496118 - L2 LINE L2 -3 3310 3214 1169 200 90 48 chr17 2008939 2009091 -87495462 - AluJo SINE Alu 0 302 158 2268 91 0 17 chr17 2009091 2009387 -87495166 - AluSx SINE Alu -21 291 1 1169 200 90 48 chr17 2009387 2009524 -87495029 - AluJo SINE Alu -144 158 1 187 147 44 103 chr17 2009575 2009635 -87494918 - L2 LINE L2 -9 3304 3247 252 0 0 0 chr17 2009635 2009663 -87494890 + (CAAGA)n Simple_repeat Simple_repeat 5 32 0 209 279 192 0 chr17 2009863 2009967 -87494586 - L3 LINE CR1 -22 1555 1432 1754 158 65 3 chr17 2010023 2010314 -87494239 - AluJb SINE Alu -3 309 1 513 255 151 82 chr17 2010392 2010858 -87493695 - L3 LINE CR1 -136 1441 932 1632 183 23 42 chr17 2010858 2011164 -87493389 - AluJb SINE Alu -12 300 1 513 255 151 82 chr17 2011164 2011235 -87493318 - L3 LINE CR1 -645 932 867 320 333 46 20 chr17 2011350 2011503 -87493050 - L3 LINE CR1 -720 857 701 2317 103 7 0 chr17 2011508 2011809 -87492744 - AluSq SINE Alu -10 303 1 219 254 0 17 chr17 2012690 2012749 -87491804 + MER5A DNA MER1_type 28 85 -104 1762 172 0 17 chr17 2012749 2012908 -87491645 - AluSx SINE Alu -20 292 139 1957 176 3 0 chr17 2012908 2013215 -87491338 - AluSx SINE Alu -4 308 1 1762 172 0 17 chr17 2013215 2013352 -87491201 - AluSx SINE Alu -173 139 1 1425 174 121 11 chr17 2013461 2013725 -87490828 - AluJb SINE Alu -19 293 1 649 150 0 0 chr17 2013729 2013829 -87490724 - AluJ/FLAM SINE Alu -211 101 2 2018 143 0 17 chr17 2013987 2014280 -87490273 - AluJo SINE Alu -24 288 1 640 283 59 0 chr17 2014546 2014733 -87489820 - MIR SINE MIR -4 258 61 2987 165 34 36 chr17 2015070 2015240 -87489313 - L1MA7 LINE L1 0 6291 6122 1759 158 3 52 chr17 2015240 2015550 -87489003 - AluJb SINE Alu -17 295 1 2987 165 34 36 chr17 2015550 2016047 -87488506 - L1MA7 LINE L1 -169 6122 5625 2454 80 0 0 chr17 2016831 2017130 -87487423 - AluY SINE Alu -12 299 1 1002 152 0 0 chr17 2017130 2017275 -87487278 - AluSq/x SINE Alu -167 145 1 238 294 327 20 chr17 2017585 2017738 -87486815 - MIR SINE MIR -62 200 1 1947 146 3 33 chr17 2017804 2018106 -87486447 - AluJb SINE Alu -19 293 1 2315 85 11 0 chr17 2018143 2018451 -87486102 + AluSq SINE Alu 1 311 0 1703 128 3 104 chr17 2019705 2020033 -87484520 - AluYa5 SINE Alu -14 297 3 192 40 0 0 chr17 2020943 2020968 -87483585 + (TTTTG)n Simple_repeat Simple_repeat 2 26 0 2027 135 0 44 chr17 2021215 2021533 -87483020 + AluSx SINE Alu 2 305 -7 1773 152 0 14 chr17 2021538 2021815 -87482738 + AluSx SINE Alu 1 273 -39 336 226 39 10 chr17 2021819 2021921 -87482632 - MIR SINE MIR -48 214 110 2182 126 0 0 chr17 2022150 2022443 -87482110 - AluSx SINE Alu -19 293 1 2101 133 33 0 chr17 2022689 2022990 -87481563 + AluSx SINE Alu 1 311 -1 696 255 115 36 chr17 2023977 2024255 -87480298 - L2 LINE L2 -8 3305 3006 1937 123 37 0 chr17 2024314 2024583 -87479970 - AluJo SINE Alu -33 279 1 2455 55 0 14 chr17 2025102 2025447 -87479106 + AluY SINE Alu 1 341 0 2198 139 0 0 chr17 2025631 2025933 -87478620 - AluJb SINE Alu -10 302 1 1554 157 16 72 chr17 2025933 2026251 -87478302 - AluJb SINE Alu -12 300 1 2344 93 0 7 chr17 2026861 2027161 -87477392 + AluSx SINE Alu 1 298 -14 25 0 0 0 chr17 2027262 2027287 -87477266 + AT_rich Low_complexity Low_complexity 1 25 0 2053 96 8 0 chr17 2027522 2027782 -87476771 + AluSq SINE Alu 1 262 -51 917 26 17 0 chr17 2027782 2027897 -87476656 + (TAAAA)n Simple_repeat Simple_repeat 2 118 0 355 290 22 0 chr17 2028364 2028502 -87476051 + L1ME LINE L1 4771 4911 -1235 1384 192 73 8 chr17 2028636 2028897 -87475656 - AluJo SINE Alu -34 278 1 709 199 18 60 chr17 2028899 2028954 -87475599 + L1ME LINE L1 5087 5143 -1021 1670 181 3 29 chr17 2028954 2029269 -87475284 - AluJo SINE Alu -5 307 1 709 199 18 60 chr17 2029269 2029332 -87475221 + L1ME LINE L1 5143 5207 -957 2198 85 0 75 chr17 2029332 2029651 -87474902 + AluSx SINE Alu 1 295 -17 709 199 18 60 chr17 2029651 2029907 -87474646 + L1ME LINE L1 5207 5442 -722 1023 128 0 0 chr17 2029987 2030128 -87474425 - AluJb SINE Alu -14 298 158 1340 237 101 22 chr17 2030144 2030650 -87473903 + L1ME2 LINE L1 4084 4629 -1517 964 227 123 74 chr17 2030652 2030851 -87473702 + L1ME2 LINE L1 4796 4984 -1180 1881 175 14 0 chr17 2030851 2031143 -87473410 + AluJb SINE Alu 1 296 -16 2201 115 0 3 chr17 2031150 2031438 -87473115 + AluSx SINE Alu 5 291 -21 964 227 123 74 chr17 2031438 2031489 -87473064 + L1ME2 LINE L1 4989 5036 -1128 1288 186 90 21 chr17 2031489 2031779 -87472774 - AluJb SINE Alu -2 310 1 1991 114 30 30 chr17 2031788 2031948 -87472605 - AluSx SINE Alu -14 298 136 2400 94 0 0 chr17 2031948 2032245 -87472308 - AluY SINE Alu -14 297 1 1991 114 30 30 chr17 2032245 2032382 -87472171 - AluSx SINE Alu -175 137 1 2051 127 0 44 chr17 2032387 2032555 -87471998 - AluSx SINE Alu -11 301 152 2357 81 0 3 chr17 2032555 2032850 -87471703 - AluY SINE Alu -17 294 1 2051 127 0 44 chr17 2032850 2032996 -87471557 - AluSx SINE Alu -160 152 1 964 227 123 74 chr17 2032996 2033334 -87471219 + L1ME2 LINE L1 5046 5436 -728 1595 188 31 10 chr17 2033334 2033622 -87470931 + AluJo SINE Alu 1 294 -18 964 227 123 74 chr17 2033622 2033781 -87470772 + L1ME2 LINE L1 5436 5586 -578 1126 144 51 0 chr17 2033787 2033982 -87470571 + MER30 DNA MER1_type 26 230 0 1660 196 50 30 chr17 2033992 2034390 -87470163 + L1ME2 LINE L1 5587 5992 -172 335 274 0 32 chr17 2034404 2034499 -87470054 - L1MC4 LINE L1 -1334 6708 6617 936 151 81 29 chr17 2034512 2034684 -87469869 - AluJb SINE Alu -47 265 85 189 0 0 0 chr17 2034684 2034705 -87469848 + (TTTTC)n Simple_repeat Simple_repeat 2 22 0 1910 121 4 4 chr17 2034710 2034967 -87469586 - AluSx SINE Alu -37 275 19 2527 209 43 34 chr17 2038359 2038521 -87466032 + L1M4 LINE L1 4498 4657 -1489 2129 145 0 0 chr17 2038521 2038825 -87465728 + AluSx SINE Alu 1 304 -8 2527 209 43 34 chr17 2038825 2039297 -87465256 + L1M4 LINE L1 4657 5141 -1005 1962 139 34 0 chr17 2039297 2039592 -87464961 + AluSx SINE Alu 1 305 -7 2527 209 43 34 chr17 2039592 2039630 -87464923 + L1M4 LINE L1 5141 5177 -969 563 193 0 35 chr17 2039630 2039744 -87464809 + AluJb SINE Alu 11 120 -192 408 181 0 0 chr17 2039744 2039827 -87464726 + (CA)n Simple_repeat Simple_repeat 1 83 0 1232 150 0 0 chr17 2039849 2040029 -87464524 + AluJb SINE Alu 132 311 -1 1231 120 89 4 chr17 2040029 2040254 -87464299 + L1MB4 LINE L1 5904 6147 -33 330 22 0 0 chr17 2041138 2041184 -87463369 + L1MB3 LINE L1 6138 6183 0 504 279 8 0 chr17 2041185 2041307 -87463246 - MER3 DNA MER1_type -81 128 6 1812 95 26 0 chr17 2041465 2041763 -87462790 + AluSx SINE Alu 63 366 0 1406 181 102 11 chr17 2041928 2042193 -87462360 + AluJb SINE Alu 1 289 -23 282 333 42 42 chr17 2042202 2042374 -87462179 + L1M4 LINE L1 3852 4026 -2120 2269 124 0 0 chr17 2042374 2042680 -87461873 + AluSx SINE Alu 1 306 -6 282 333 42 42 chr17 2042680 2042768 -87461785 + L1M4 LINE L1 4025 4112 -2034 2683 40 0 3 chr17 2042836 2043140 -87461413 + AluYb8 SINE Alu 5 307 -11 465 213 69 23 chr17 2043154 2043328 -87461225 + L1M4 LINE L1 4378 4559 -1587 1893 74 12 4 chr17 2043620 2043863 -87460690 + AluSg SINE Alu 44 288 -22 304 206 32 90 chr17 2043981 2044136 -87460417 - L1MC5 LINE L1 0 7961 7816 2162 107 0 20 chr17 2044151 2044449 -87460104 - AluSg SINE Alu -18 292 1 2044 125 0 38 chr17 2044628 2044941 -87459612 + AluSx SINE Alu 1 301 -11 517 192 0 0 chr17 2044942 2045020 -87459533 - AluJ/FLAM SINE Alu -232 80 3 560 252 19 44 chr17 2045034 2045193 -87459360 + L2 LINE L2 3156 3310 -3 1118 170 58 0 chr17 2045647 2045835 -87458718 - AluJb SINE Alu -17 295 97 1982 125 4 0 chr17 2045835 2046107 -87458446 + AluSx SINE Alu 24 296 -16 258 260 78 0 chr17 2046308 2046385 -87458168 + MLT1J LTR MaLR 5 87 -424 869 205 0 6 chr17 2046399 2046555 -87457998 - FRAM SINE Alu -25 151 1 456 269 156 48 chr17 2046555 2046908 -87457645 + MLT1J LTR MaLR 75 465 -46 309 300 133 40 chr17 2046935 2047014 -87457539 + MIR SINE MIR 59 129 -133 2007 105 14 14 chr17 2047014 2047299 -87457254 + AluSg SINE Alu 26 310 0 309 300 133 40 chr17 2047299 2047369 -87457184 + MIR SINE MIR 129 222 -40 2309 120 0 0 chr17 2047722 2048030 -87456523 - AluSx SINE Alu -4 308 1 1569 156 40 13 chr17 2048036 2048338 -87456215 - L1MA7 LINE L1 0 6291 5982 762 181 12 6 chr17 2048384 2048544 -87456009 + MER3 DNA MER1_type 5 165 -44 1681 184 25 4 chr17 2048555 2048833 -87455720 - AluJb SINE Alu -28 284 1 426 20 0 0 chr17 2048833 2048847 -87455706 + (TG)n Simple_repeat Simple_repeat 1 65 0 426 20 0 0 chr17 2048847 2048898 -87455655 + (TG)n Simple_repeat Simple_repeat 2 52 0 1961 101 75 0 chr17 2048925 2049193 -87455360 - AluSx SINE Alu -24 288 1 1896 135 3 30 chr17 2049727 2050024 -87454529 + AluJb SINE Alu 1 289 -23 2216 108 7 0 chr17 2052269 2052565 -87451988 - AluSx SINE Alu -9 303 6 2202 107 7 0 chr17 2052584 2052874 -87451679 - AluSx SINE Alu -20 292 1 21 36 0 0 chr17 2053149 2053177 -87451376 + AT_rich Low_complexity Low_complexity 1 28 0 213 39 0 0 chr17 2054813 2054839 -87449714 + (CAAT)n Simple_repeat Simple_repeat 1 26 0 685 188 9 0 chr17 2054972 2055084 -87449469 - MER81 DNA DNA -1 113 1 234 0 0 0 chr17 2055271 2055297 -87449256 + (T)n Simple_repeat Simple_repeat 1 26 0 820 167 0 0 chr17 2055542 2055674 -87448879 + FLAM_C SINE Alu 1 132 -1 2255 107 13 0 chr17 2056675 2056975 -87447578 - AluSq SINE Alu -9 304 1 2294 88 10 0 chr17 2056987 2057281 -87447272 - AluSx SINE Alu -15 297 1 811 221 80 6 chr17 2057338 2057501 -87447052 + FAM SINE Alu 1 175 0 426 272 47 67 chr17 2057526 2057780 -87446773 - L1ME LINE L1 -370 5751 5503 2635 31 0 0 chr17 2057821 2058115 -87446438 - AluY SINE Alu -17 294 1 1869 186 3 0 chr17 2058594 2058900 -87445653 - AluJo SINE Alu -5 307 1 182 61 0 30 chr17 2058904 2058937 -87445616 + (TTTG)n Simple_repeat Simple_repeat 2 33 0 1007 83 0 0 chr17 2058937 2059058 -87445495 - AluY SINE Alu -190 121 1 566 240 128 25 chr17 2059062 2059304 -87445249 - L1MC4a LINE L1 -1830 5978 5712 394 296 53 4 chr17 2059320 2059479 -87445074 - L1MC4a LINE L1 -580 5662 5500 753 122 16 0 chr17 2061226 2061349 -87443204 + L1PB1 LINE L1 5742 5866 -285 2335 111 3 3 chr17 2061349 2061656 -87442897 - AluSq SINE Alu -6 307 1 1453 179 4 12 chr17 2062287 2062538 -87442015 + AluJb SINE Alu 1 249 -63 1562 151 4 12 chr17 2070376 2070627 -87433926 + AluJo SINE Alu 30 278 -34 290 197 26 0 chr17 2070630 2070706 -87433847 + GA-rich Low_complexity Low_complexity 3 80 0 1242 211 48 0 chr17 2070850 2071120 -87433433 - MER58B DNA MER1_type -2 339 57 423 0 0 0 chr17 2071151 2071198 -87433355 + (CA)n Simple_repeat Simple_repeat 2 48 0 184 121 45 45 chr17 2071236 2071302 -87433251 + (CAGG)n Simple_repeat Simple_repeat 2 67 0 254 291 8 8 chr17 2071357 2071484 -87433069 + (CA)n Simple_repeat Simple_repeat 1 127 0 1861 169 0 3 chr17 2071485 2071780 -87432773 + AluSx SINE Alu 1 294 -18 2306 118 3 0 chr17 2071781 2072086 -87432467 + AluSq SINE Alu 1 306 -7 2354 98 13 7 chr17 2072086 2072392 -87432161 + AluSx SINE Alu 1 308 -4 207 284 11 21 chr17 2072471 2072566 -87431987 + (CATA)n Simple_repeat Simple_repeat 1 94 0 212 254 11 79 chr17 2072617 2072794 -87431759 + (CAGA)n Simple_repeat Simple_repeat 4 168 0 * 236 234 0 65 chr17 2072693 2072800 -87431753 + (CAGAGA)n Simple_repeat Simple_repeat 1 100 0 323 161 151 21 chr17 2072816 2072909 -87431644 + L1MB3 LINE L1 6079 6183 0 278 333 0 33 chr17 2073064 2073217 -87431336 + G-rich Low_complexity Low_complexity 2 149 0 1810 125 3 97 chr17 2073349 2073678 -87430875 + AluJb SINE Alu 1 298 -14 2244 188 41 46 chr17 2074547 2075131 -87429422 + L1MC4 LINE L1 7462 8042 0 329 323 39 8 chr17 2075990 2076117 -87428436 + MIR SINE MIR 117 247 -15 318 48 0 0 chr17 2076349 2076391 -87428162 + 5S rRNA rRNA 1 42 -79 313 162 118 0 chr17 2076492 2076560 -87427993 + MIR SINE MIR 187 262 0 239 331 74 33 chr17 2078430 2078551 -87426002 - L2 LINE L2 -14 3258 3133 203 241 0 19 chr17 2079519 2079573 -87424980 + G-rich Low_complexity Low_complexity 5 57 0 2075 160 108 5 chr17 2080458 2080846 -87423707 + MSTA LTR MaLR 1 428 0 1399 142 158 24 chr17 2081241 2081495 -87423058 - AluSg1 SINE Alu -21 288 1 266 367 51 25 chr17 2081614 2081810 -87422743 - L2 LINE L2 -493 2821 2621 807 141 0 16 chr17 2081970 2082091 -87422462 + FLAM_C SINE Alu 1 119 -24 216 86 0 0 chr17 2082091 2082126 -87422427 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 194 326 0 0 chr17 2082879 2082925 -87421628 + L2 LINE L2 3140 3185 -87 455 238 90 13 chr17 2083099 2083261 -87421292 - MIR SINE MIR -56 206 34 630 244 34 118 chr17 2083417 2083543 -87421010 + L1MD2 LINE L1 4358 4493 -1653 2134 100 19 32 chr17 2083543 2083852 -87420701 + AluSx SINE Alu 1 305 -7 630 244 34 118 chr17 2083852 2084139 -87420414 + L1MD2 LINE L1 4493 4736 -1410 636 211 55 0 chr17 2084155 2084283 -87420270 + AluJo SINE Alu 2 136 -176 5296 187 25 40 chr17 2084286 2084686 -87419867 + L1MD2 LINE L1 4889 5293 -1066 1794 168 16 10 chr17 2084686 2084995 -87419558 + AluJb SINE Alu 1 311 -1 5296 187 25 40 chr17 2084995 2086083 -87418470 + L1MD2 LINE L1 5293 6349 -10 252 111 0 0 chr17 2086339 2086384 -87418169 + (A)n Simple_repeat Simple_repeat 1 45 0 505 139 0 40 chr17 2086756 2086997 -87417556 + AluJ SINE Alu 2 312 0 21 36 0 0 chr17 2086997 2087025 -87417528 + AT_rich Low_complexity Low_complexity 1 28 0 2048 123 7 10 chr17 2087028 2087321 -87417232 + AluSx SINE Alu 1 292 -20 2205 123 3 0 chr17 2087323 2087623 -87416930 - AluSx SINE Alu -9 303 3 1260 73 6 0 chr17 2087767 2087931 -87416622 - L1PA5 LINE L1 -4 6150 5986 825 169 0 0 chr17 2087946 2088070 -87416483 - FLAM_C SINE Alu -19 124 1 759 150 0 18 chr17 2088114 2088332 -87416221 - AluJb SINE Alu -15 297 2 1927 184 147 42 chr17 2088438 2088820 -87415733 + L1ME1 LINE L1 5143 5484 -682 1689 155 58 0 chr17 2088820 2089098 -87415455 + AluSx SINE Alu 5 298 -14 1927 184 147 42 chr17 2089098 2089146 -87415407 + L1ME1 LINE L1 5484 5526 -640 2263 114 0 0 chr17 2089146 2089443 -87415110 + AluSx SINE Alu 1 297 -15 1927 184 147 42 chr17 2089443 2089661 -87414892 + L1ME1 LINE L1 5526 5828 -338 1640 186 3 14 chr17 2089684 2089974 -87414579 + AluJo SINE Alu 14 300 -12 353 300 50 50 chr17 2090074 2090294 -87414259 - MIR SINE MIR -19 243 24 975 182 0 13 chr17 2091376 2091535 -87413018 - AluJb SINE Alu -22 290 134 1681 198 3 0 chr17 2092086 2092369 -87412184 + AluSx SINE Alu 1 284 -28 2117 105 0 51 chr17 2092474 2092789 -87411764 - AluSx SINE Alu -13 299 1 201 167 0 0 chr17 2093182 2093218 -87411335 + (TA)n Simple_repeat Simple_repeat 1 36 0 1931 166 0 0 chr17 2093218 2093513 -87411040 - AluSx SINE Alu -17 295 1 23 33 0 0 chr17 2093612 2093642 -87410911 + AT_rich Low_complexity Low_complexity 1 30 0 1787 147 48 27 chr17 2093707 2094000 -87410553 + AluJo SINE Alu 1 299 -13 1947 143 0 23 chr17 2094003 2094338 -87410215 + AluSx SINE Alu 1 312 0 22 70 0 0 chr17 2094346 2094389 -87410164 + AT_rich Low_complexity Low_complexity 1 43 0 1648 164 12 53 chr17 2094394 2094717 -87409836 + AluSx SINE Alu 1 310 -2 201 254 0 0 chr17 2094999 2095058 -87409495 + (TA)n Simple_repeat Simple_repeat 1 59 0 943 160 0 18 chr17 2095387 2095556 -87408997 + FRAM SINE Alu 1 166 0 200 398 42 0 chr17 2095982 2096100 -87408453 - L2 LINE L2 -4 3268 3146 1581 181 57 0 chr17 2096304 2096585 -87407968 + AluJb SINE Alu 3 299 -13 1828 128 36 43 chr17 2096613 2096777 -87407776 - AluSx SINE Alu -9 303 140 2199 101 7 3 chr17 2096777 2097064 -87407489 - AluSx SINE Alu -20 292 5 1828 128 36 43 chr17 2097064 2097204 -87407349 - AluSx SINE Alu -172 140 1 198 209 0 0 chr17 2097251 2097294 -87407259 - MIR SINE MIR 0 262 220 793 242 10 48 chr17 2097359 2097644 -87406909 + LTR16A LTR ERVL 107 434 -16 800 178 0 0 chr17 2097682 2097817 -87406736 - FLAM_A SINE Alu 0 142 8 28 0 0 0 chr17 2098161 2098189 -87406364 + AT_rich Low_complexity Low_complexity 1 28 0 23 0 0 0 chr17 2098498 2098521 -87406032 + AT_rich Low_complexity Low_complexity 1 23 0 2502 57 0 7 chr17 2098787 2099088 -87405465 + AluY SINE Alu 1 299 -12 437 212 144 17 chr17 2100413 2100531 -87404022 + MER94 DNA DNA 1 133 -1 213 121 0 0 chr17 2102617 2102650 -87401903 + (CA)n Simple_repeat Simple_repeat 2 34 0 22 56 0 0 chr17 2104594 2104630 -87399923 + AT_rich Low_complexity Low_complexity 1 36 0 239 218 91 18 chr17 2104658 2104823 -87399730 - L1ME4a LINE L1 -33 6088 5912 2266 97 0 7 chr17 2105134 2105444 -87399109 + AluSc SINE Alu 2 309 0 2324 66 11 0 chr17 2105672 2105959 -87398594 + AluY SINE Alu 1 290 -21 1318 160 22 9 chr17 2106181 2106412 -87398141 + L1MC1 LINE L1 6095 6328 -5 182 191 64 0 chr17 2106437 2106484 -87398069 - L2 LINE L2 -3 3310 3261 2132 128 0 0 chr17 2106507 2106819 -87397734 + AluSx SINE Alu 1 312 0 521 266 46 66 chr17 2106849 2106909 -87397644 + L1ME LINE L1 5517 5577 -585 1822 165 0 52 chr17 2106909 2107237 -87397316 + AluJo SINE Alu 1 311 -1 521 266 46 66 chr17 2107237 2107329 -87397224 + L1ME LINE L1 5577 5669 -493 1545 183 68 4 chr17 2107329 2107608 -87396945 - AluJb SINE Alu -15 297 1 521 266 46 66 chr17 2107608 2107753 -87396800 + L1ME LINE L1 5669 5800 -362 1969 133 4 0 chr17 2107753 2108023 -87396530 + AluJo SINE Alu 1 271 -41 521 266 46 66 chr17 2108023 2108042 -87396511 + L1ME LINE L1 5800 5818 -344 302 93 0 0 chr17 2108073 2108116 -87396437 + MADE1 DNA Mariner 2 44 -36 2265 132 91 5 chr17 2108560 2108954 -87395599 + MSTA LTR MaLR 1 428 0 1875 134 35 3 chr17 2109155 2109439 -87395114 - AluSx SINE Alu -19 293 1 939 269 57 61 chr17 2109462 2110142 -87394411 - L2 LINE L2 -5 3308 2625 186 43 0 0 chr17 2111321 2111344 -87393209 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 299 275 62 39 chr17 2111383 2111561 -87392992 + L1MEd LINE L1 5 186 -5933 500 289 98 48 chr17 2111779 2112116 -87392437 + L1MEd LINE L1 860 1179 -1805 324 0 0 0 chr17 2112116 2112152 -87392401 + (CCAA)n Simple_repeat Simple_repeat 2 37 0 500 289 98 48 chr17 2112152 2112595 -87391958 + L1MEd LINE L1 1179 1598 -1386 1740 131 10 89 chr17 2112595 2112908 -87391645 + AluSx SINE Alu 1 288 -24 500 289 98 48 chr17 2112908 2113313 -87391240 + L1MEd LINE L1 1598 2123 -861 * 3578 203 45 62 chr17 2113295 2113426 -87391127 + L1ME1 LINE L1 5187 5319 -847 2147 98 4 0 chr17 2113426 2113702 -87390851 + AluSp SINE Alu 34 310 -3 2004 116 18 4 chr17 2113703 2114017 -87390536 + AluSg SINE Alu 1 318 0 2032 99 0 31 chr17 2114026 2114318 -87390235 + AluSx SINE Alu 14 296 -16 3578 203 45 62 chr17 2114318 2115150 -87389403 + L1ME1 LINE L1 5327 6162 -4 591 233 91 47 chr17 2115221 2115455 -87389098 + L1ME3A LINE L1 5708 5948 -218 2082 135 0 26 chr17 2115458 2115632 -87388921 - AluSx SINE Alu -9 303 139 2275 85 7 10 chr17 2115632 2115927 -87388626 - AluSq SINE Alu -19 294 1 2082 135 0 26 chr17 2115927 2116063 -87388490 - AluSx SINE Alu -173 139 1 228 135 0 0 chr17 2116079 2116116 -87388437 + (CATATA)n Simple_repeat Simple_repeat 4 40 0 387 235 45 68 chr17 2116159 2116291 -87388262 + L1ME3A LINE L1 5965 6093 -77 284 276 97 48 chr17 2116892 2117037 -87387516 + MIR SINE MIR 72 223 -39 2593 80 0 0 chr17 2117304 2117644 -87386909 + AluSx SINE Alu 1 340 0 279 0 0 0 chr17 2117706 2117737 -87386816 + (A)n Simple_repeat Simple_repeat 1 31 0 2257 82 0 4 chr17 2118816 2119097 -87385456 + AluSg SINE Alu 1 280 -30 24 32 0 0 chr17 2119624 2119655 -87384898 + AT_rich Low_complexity Low_complexity 1 31 0 224 304 0 0 chr17 2119913 2119969 -87384584 - L2 LINE L2 -3 3269 3214 23 54 0 0 chr17 2121638 2121675 -87382878 + AT_rich Low_complexity Low_complexity 1 37 0 2095 111 3 3 chr17 2121675 2121963 -87382590 - AluSx SINE Alu -24 288 1 21 36 0 0 chr17 2122095 2122123 -87382430 + AT_rich Low_complexity Low_complexity 1 28 0 1104 129 6 6 chr17 2122123 2122286 -87382267 - AluSg/x SINE Alu -27 283 121 192 40 0 0 chr17 2123163 2123188 -87381365 + (GGGAA)n Simple_repeat Simple_repeat 3 27 0 459 0 0 0 chr17 2124102 2124153 -87380400 + (CA)n Simple_repeat Simple_repeat 1 51 0 2111 93 72 0 chr17 2124490 2124768 -87379785 - AluSq SINE Alu -15 298 1 22 35 0 0 chr17 2126207 2126236 -87378317 + AT_rich Low_complexity Low_complexity 1 29 0 338 174 116 12 chr17 2126797 2126883 -87377670 + L1ME4a LINE L1 5710 5804 -317 419 224 68 20 chr17 2126971 2127118 -87377435 + L1ME4a LINE L1 5944 6097 -24 25 51 0 0 chr17 2127207 2127246 -87377307 + AT_rich Low_complexity Low_complexity 1 39 0 246 273 91 53 chr17 2127896 2128028 -87376525 - MIR3 SINE MIR -1 207 71 270 195 26 52 chr17 2128648 2128725 -87375828 - L3b LINE CR1 -87 1496 1422 825 108 0 25 chr17 2128971 2129091 -87375462 - FLAM_C SINE Alu -16 117 1 898 202 106 5 chr17 2129307 2129505 -87375048 + MER20 DNA MER1_type 2 219 0 2345 67 0 57 chr17 2129631 2129946 -87374607 + AluY SINE Alu 1 297 -14 882 157 119 0 chr17 2129956 2130115 -87374438 + FAM SINE Alu 1 49 0 2089 128 3 0 chr17 2130799 2131088 -87373465 + AluSx SINE Alu 1 290 -22 2001 140 3 0 chr17 2132784 2133084 -87371469 - AluSx SINE Alu -10 302 2 1882 146 3 7 chr17 2133087 2133382 -87371171 - AluJo SINE Alu -18 294 1 471 285 39 0 chr17 2133383 2133513 -87371040 - Charlie8 DNA MER1_type -2278 139 5 2261 99 0 3 chr17 2134064 2134377 -87370176 + AluSq SINE Alu 1 312 -1 222 260 52 39 chr17 2134405 2134482 -87370071 - MIR SINE MIR -99 109 32 185 206 0 0 chr17 2134523 2134557 -87369996 + MIR SINE MIR 65 98 -164 457 231 34 0 chr17 2134615 2134732 -87369821 + L1MC4 LINE L1 7922 8042 0 1935 130 23 0 chr17 2134906 2135206 -87369347 + AluSx SINE Alu 1 307 -5 1941 123 41 0 chr17 2135212 2135330 -87369223 + AluSg SINE Alu 1 113 -197 222 37 0 0 chr17 2135330 2135357 -87369196 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1941 123 41 0 chr17 2135357 2135531 -87369022 + AluSg SINE Alu 113 305 -5 251 275 14 14 chr17 2135604 2135673 -87368880 - MIR3 SINE MIR -129 79 11 2303 51 0 24 chr17 2136292 2136586 -87367967 - AluY SINE Alu -17 294 8 1295 184 3 89 chr17 2136696 2137023 -87367530 - AluJo SINE Alu -12 300 2 1750 158 14 0 chr17 2137793 2138084 -87366469 - AluJo SINE Alu -17 295 1 2314 78 7 0 chr17 2139220 2139529 -87365024 + AluSp SINE Alu 1 311 -2 2121 86 41 0 chr17 2139532 2139824 -87364729 + AluSc SINE Alu 1 304 -5 355 331 35 14 chr17 2139887 2140032 -87364521 + MIR3 SINE MIR 2 149 -59 355 293 67 43 chr17 2140051 2140215 -87364338 - MER5B DNA MER1_type -10 168 1 1740 152 26 69 chr17 2140231 2140520 -87364033 + MER58B DNA MER1_type 9 283 -2137 1956 60 0 8 chr17 2140520 2140808 -87363745 - AluY SINE Alu 0 321 36 1740 152 26 69 chr17 2140808 2140865 -87363688 + MER58B DNA MER1_type 283 341 0 1907 147 0 0 chr17 2141736 2142035 -87362518 - AluSx SINE Alu -13 299 1 341 321 177 55 chr17 2142114 2142441 -87362112 - L2 LINE L2 0 3272 2906 2785 7 0 0 chr17 2142523 2142833 -87361720 + AluY SINE Alu 1 310 -1 333 236 14 0 chr17 2142847 2142919 -87361634 - L2 LINE L2 -561 2753 2681 5330 54 9 6 chr17 2142937 2143624 -87360929 + SVA Other Other 719 1386 0 1578 171 0 43 chr17 2143880 2144184 -87360369 + AluJb SINE Alu 1 291 -21 225 83 0 0 chr17 2144352 2144388 -87360165 + (TATG)n Simple_repeat Simple_repeat 2 37 0 974 108 0 51 chr17 2144390 2144481 -87360072 - AluSg/x SINE Alu -26 283 202 2222 77 20 3 chr17 2144481 2144778 -87359775 - AluSc SINE Alu -7 302 1 974 108 0 51 chr17 2144778 2144843 -87359710 - AluSg/x SINE Alu -107 202 135 359 220 43 26 chr17 2144968 2145094 -87359459 + L2 LINE L2 2764 2952 -361 1991 107 30 3 chr17 2145137 2145436 -87359117 + AluSg SINE Alu 1 307 -3 267 103 0 0 chr17 2145439 2145478 -87359075 + (CA)n Simple_repeat Simple_repeat 2 40 0 472 225 176 7 chr17 2145493 2145635 -87358918 - MIR SINE MIR -10 252 87 1900 140 3 7 chr17 2145674 2145974 -87358579 + AluSx SINE Alu 1 299 -13 1277 164 22 4 chr17 2145981 2146213 -87358340 + AluJo SINE Alu 61 296 -16 1762 130 58 0 chr17 2146219 2146496 -87358057 + AluSg SINE Alu 6 298 -12 1629 118 121 4 chr17 2146823 2147095 -87357458 + AluJb SINE Alu 1 304 -8 2175 105 0 13 chr17 2148113 2148426 -87356127 + AluSx SINE Alu 1 309 -3 2260 82 0 25 chr17 2148426 2148740 -87355813 + AluY SINE Alu 1 307 -4 302 272 12 0 chr17 2148764 2148845 -87355708 + L1ME3A LINE L1 6065 6146 -24 1967 151 0 0 chr17 2152020 2152318 -87352235 + AluSx SINE Alu 1 298 -14 380 222 86 0 chr17 2152557 2152638 -87351915 + MER20B DNA MER1_type 88 175 -608 1934 99 35 0 chr17 2152638 2152922 -87351631 + AluSx SINE Alu 1 294 -18 515 182 159 30 chr17 2153023 2153155 -87351398 - MER58C DNA MER1_type -8 207 59 1292 188 38 24 chr17 2154613 2154900 -87349653 - AluJb SINE Alu -20 292 2 2376 78 0 0 chr17 2155098 2155447 -87349106 - AluY SINE Alu 0 349 1 738 188 8 0 chr17 2155474 2155602 -87348951 - FLAM_C SINE Alu -12 131 3 1862 133 0 41 chr17 2155895 2156030 -87348523 + AluSx SINE Alu 5 144 -168 2205 82 0 3 chr17 2156030 2156322 -87348231 + AluY SINE Alu 1 291 -20 2292 57 0 51 chr17 2156326 2156642 -87347911 + AluY SINE Alu 4 303 -8 1862 133 0 41 chr17 2156642 2156816 -87347737 + AluSx SINE Alu 147 306 -6 348 325 17 8 chr17 2157162 2157279 -87347274 - MIR SINE MIR -88 174 57 1009 168 0 0 chr17 2157283 2157450 -87347103 + FRAM SINE Alu 1 167 -9 1647 181 10 3 chr17 2157730 2158022 -87346531 + AluJo SINE Alu 3 296 -16 516 135 14 0 chr17 2158419 2158493 -87346060 + AluJ/FLAM SINE Alu 2 76 -236 1805 130 91 0 chr17 2158506 2158791 -87345762 - AluSx SINE Alu -1 311 1 2181 110 0 3 chr17 2158832 2159141 -87345412 + AluSx SINE Alu 1 308 -4 21 0 0 0 chr17 2159145 2159166 -87345387 + AT_rich Low_complexity Low_complexity 1 21 0 185 289 0 0 chr17 2159635 2159680 -87344873 + L2 LINE L2 2933 2977 -336 2886 185 25 74 chr17 2159832 2160057 -87344496 - MER82 DNA MER2_type 0 653 418 2168 73 28 0 chr17 2160057 2160343 -87344210 + AluY SINE Alu 1 294 -17 2886 185 25 74 chr17 2160343 2160634 -87343919 - MER82 DNA MER2_type -235 418 177 1800 139 0 32 chr17 2160634 2160779 -87343774 + AluSx SINE Alu 1 149 -163 1688 120 94 0 chr17 2160779 2161054 -87343499 + AluSg SINE Alu 1 301 -9 1800 139 0 32 chr17 2161054 2161218 -87343335 + AluSx SINE Alu 149 300 -12 2886 185 25 74 chr17 2161218 2161387 -87343166 - MER82 DNA MER2_type -476 177 1 1190 197 33 0 chr17 2161428 2161641 -87342912 + MER58A DNA MER1_type 1 220 -4 715 188 0 0 chr17 2162248 2162360 -87342193 + FLAM_C SINE Alu 9 120 -23 2001 128 0 0 chr17 2162540 2162836 -87341717 + AluSx SINE Alu 1 296 -16 1920 127 27 3 chr17 2163794 2164086 -87340467 - AluSp SINE Alu -14 299 1 2297 81 3 0 chr17 2164186 2164481 -87340072 - AluSp SINE Alu -17 296 1 2279 46 11 0 chr17 2164524 2164865 -87339688 - AluY SINE Alu 0 344 1 1641 182 0 10 chr17 2165163 2165459 -87339094 + AluJb SINE Alu 1 293 -19 2238 90 0 7 chr17 2165605 2165905 -87338648 - AluSx SINE Alu -14 298 1 252 269 35 122 chr17 2166022 2166080 -87338473 + L2 LINE L2 2689 2750 -564 655 143 17 0 chr17 2166080 2166199 -87338354 + L1MA4 LINE L1 6169 6289 -11 252 269 35 122 chr17 2166199 2166337 -87338216 + L2 LINE L2 2750 2868 -446 * 725 315 76 60 chr17 2166329 2167151 -87337402 - L2 LINE L2 -2 3270 2453 2259 86 0 7 chr17 2167661 2167963 -87336590 - AluSg SINE Alu -10 300 1 1172 173 122 0 chr17 2168216 2168453 -87336100 + AluJo SINE Alu 16 281 -31 322 141 218 39 chr17 2168466 2168544 -87336009 - AluJb SINE Alu -10 292 201 1399 181 50 11 chr17 2168552 2168829 -87335724 - AluJo SINE Alu -24 288 1 607 307 100 40 chr17 2168829 2169351 -87335202 + L2 LINE L2 2464 3020 -252 223 293 311 0 chr17 2169435 2169541 -87335012 + L2 LINE L2 3174 3312 -1 225 0 0 0 chr17 2169791 2169816 -87334737 + (A)n Simple_repeat Simple_repeat 1 25 0 2132 109 3 0 chr17 2170289 2170583 -87333970 + AluSq SINE Alu 1 295 -18 392 153 0 0 chr17 2170898 2170957 -87333596 - U4 snRNA snRNA -86 59 1 21 0 0 0 chr17 2171750 2171771 -87332782 + AT_rich Low_complexity Low_complexity 1 21 0 237 273 26 0 chr17 2171842 2171919 -87332634 + GA-rich Low_complexity Low_complexity 1 79 0 289 323 139 27 chr17 2172069 2172292 -87332261 + MIR SINE MIR 15 262 0 473 210 49 49 chr17 2172337 2172499 -87332054 + MER104 DNA Tc2 1 162 -18 4796 187 30 30 chr17 2172850 2172957 -87331596 + L1MB2 LINE L1 4280 4386 -1785 624 199 0 57 chr17 2172957 2173069 -87331484 + AluJo/FLAM SINE Alu 1 105 -197 2128 125 0 0 chr17 2173069 2173374 -87331179 - AluSx SINE Alu -7 305 1 624 199 0 57 chr17 2173374 2173402 -87331151 + AluJo/FLAM SINE Alu 105 133 -169 4796 187 30 30 chr17 2173402 2174324 -87330229 + L1MB2 LINE L1 4386 5318 -853 2313 51 41 0 chr17 2174324 2174619 -87329934 - AluYa5 SINE Alu -4 307 1 4796 187 30 30 chr17 2174619 2175430 -87329123 + L1MB2 LINE L1 5318 6128 -43 2097 115 0 0 chr17 2175432 2175728 -87328825 + AluSx SINE Alu 1 296 -16 1788 152 14 7 chr17 2175740 2176037 -87328516 + AluSx SINE Alu 3 301 -11 1768 133 6 60 chr17 2176049 2176198 -87328355 + AluJb SINE Alu 1 126 -186 2564 43 0 0 chr17 2176198 2176501 -87328052 + AluY SINE Alu 1 303 -8 1768 133 6 60 chr17 2176501 2176668 -87327885 + AluJb SINE Alu 126 300 -12 1671 159 3 7 chr17 2176674 2176957 -87327596 + AluJo SINE Alu 1 282 -30 1784 128 17 17 chr17 2177035 2177325 -87327228 + AluSx SINE Alu 2 291 -21 246 62 0 0 chr17 2177337 2177369 -87327184 + (TA)n Simple_repeat Simple_repeat 1 32 0 485 180 172 0 chr17 2177384 2177506 -87327047 + L1M4 LINE L1 5321 5463 -715 2711 196 68 44 chr17 2177506 2178290 -87326263 + L1MB5 LINE L1 4618 5425 -744 836 170 52 72 chr17 2178286 2178450 -87326103 + L1MB5 LINE L1 5893 6054 -120 * 2532 40 0 0 chr17 2178450 2178752 -87325801 + AluY SINE Alu 1 302 -9 836 170 52 72 chr17 2178752 2178781 -87325772 + L1MB5 LINE L1 6054 6082 -92 1185 131 115 37 chr17 2179028 2179272 -87325281 + AluJo SINE Alu 39 301 -11 252 281 176 8 chr17 2180668 2180801 -87323752 + MIR SINE MIR 32 190 -72 1951 122 0 14 chr17 2180883 2181170 -87323383 - AluSx SINE Alu -25 287 5 207 0 0 0 chr17 2181766 2181789 -87322764 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 288 343 50 70 chr17 2181840 2182279 -87322274 + L2 LINE L2 2827 3295 -18 2155 125 3 7 chr17 2182280 2182577 -87321976 - AluSx SINE Alu -16 296 1 356 266 176 38 chr17 2182766 2183033 -87321520 + L2 LINE L2 1698 2001 -1313 354 325 195 22 chr17 2183077 2183823 -87320730 + L2 LINE L2 2203 3082 -190 1038 160 155 0 chr17 2183848 2184042 -87320511 + MER1B DNA MER1_type 1 224 -73 404 169 14 0 chr17 2184040 2184111 -87320442 + MER1B DNA MER1_type 257 328 -5 * 2041 127 0 31 chr17 2184112 2184435 -87320118 + AluSq SINE Alu 1 313 0 315 320 0 0 chr17 2184535 2184613 -87319940 + L2 LINE L2 3194 3271 -1 272 133 17 0 chr17 2184964 2185024 -87319529 + (CA)n Simple_repeat Simple_repeat 2 62 0 2609 64 3 6 chr17 2185838 2186150 -87318403 + AluY SINE Alu 1 311 0 2138 68 0 0 chr17 2188961 2189227 -87315326 + AluY SINE Alu 1 266 -45 1934 152 0 0 chr17 2189371 2189660 -87314893 + AluJo SINE Alu 1 289 -23 2271 81 7 0 chr17 2189662 2189969 -87314584 + AluY SINE Alu 1 309 -2 228 269 0 13 chr17 2190920 2190998 -87313555 + G-rich Low_complexity Low_complexity 2 78 0 203 240 10 42 chr17 2191357 2191453 -87313100 + (CGAGG)n Simple_repeat Simple_repeat 2 94 0 2232 59 31 21 chr17 2191655 2191943 -87312610 - AluSx SINE Alu -21 291 1 977 89 0 41 chr17 2192029 2192175 -87312378 + AluSg/x SINE Alu 155 294 -16 593 299 48 51 chr17 2192791 2193085 -87311468 + HAL1 LINE L1 1116 1408 -1099 2452 79 7 3 chr17 2193095 2193399 -87311154 - AluSq SINE Alu -8 305 1 2082 104 17 3 chr17 2193436 2193725 -87310828 + AluSx SINE Alu 1 293 -19 2365 96 0 0 chr17 2193835 2194136 -87310417 + AluSx SINE Alu 1 301 -11 247 366 0 12 chr17 2194765 2194929 -87309624 + (TGG)n Simple_repeat Simple_repeat 1 162 0 235 264 64 16 chr17 2195476 2195601 -87308952 + L1M4 LINE L1 2873 3003 -3143 209 293 193 14 chr17 2195820 2195960 -87308593 + L2 LINE L2 2301 2465 -849 1692 117 144 4 chr17 2195977 2196233 -87308320 + AluSg1 SINE Alu 1 292 -17 2262 92 7 3 chr17 2196237 2196542 -87308011 + AluSq SINE Alu 1 306 0 807 170 0 0 chr17 2196542 2196663 -87307890 - AluJo SINE Alu -185 127 1 401 211 0 0 chr17 2197660 2197747 -87306806 - L1M3 LINE L1 -517 5639 5565 955 156 65 0 chr17 2197753 2197907 -87306646 - AluJb SINE Alu -148 164 1 1966 144 0 46 chr17 2197964 2198146 -87306407 - AluSx SINE Alu -1 311 149 2519 73 0 0 chr17 2198146 2198446 -87306107 - AluY SINE Alu -11 300 1 1966 144 0 46 chr17 2198446 2198589 -87305964 - AluSx SINE Alu -163 149 1 545 148 176 0 chr17 2198594 2198702 -87305851 - FRAM SINE Alu 0 176 50 1745 168 10 17 chr17 2198754 2199051 -87305502 + AluJb SINE Alu 1 295 -17 1872 175 0 28 chr17 2199328 2199648 -87304905 + AluJo SINE Alu 1 311 -1 420 240 124 46 chr17 2199649 2199715 -87304838 + L1ME4a LINE L1 5369 5428 -693 2237 109 0 0 chr17 2199715 2200008 -87304545 + AluY SINE Alu 2 294 -17 420 240 124 46 chr17 2200008 2200303 -87304250 + L1ME4a LINE L1 5428 5751 -370 830 215 80 6 chr17 2200328 2200491 -87304062 - FAM SINE Alu 0 175 1 2294 88 10 0 chr17 2200548 2200842 -87303711 + AluSx SINE Alu 1 297 -15 2298 106 10 0 chr17 2200854 2201155 -87303398 + AluSq SINE Alu 1 304 -9 241 267 33 33 chr17 2201285 2201405 -87303148 + L1ME4a LINE L1 6000 6119 -2 2252 114 0 7 chr17 2201568 2201702 -87302851 + AluSp SINE Alu 1 134 -179 2671 50 0 0 chr17 2201702 2202004 -87302549 + AluY SINE Alu 1 302 -9 2252 114 0 7 chr17 2202004 2202175 -87302378 + AluSp SINE Alu 134 304 -9 63 36 0 0 chr17 2202228 2202312 -87302241 + AT_rich Low_complexity Low_complexity 1 84 0 2474 74 3 0 chr17 2202362 2202660 -87301893 + AluSg SINE Alu 1 299 -11 199 302 78 35 chr17 2203149 2203265 -87301288 - MIR SINE MIR -32 230 110 188 135 27 0 chr17 2203377 2203414 -87301139 + (TA)n Simple_repeat Simple_repeat 1 38 0 1464 165 149 26 chr17 2203419 2203728 -87300825 + MER7A DNA MER2_type 1 345 -1 1111 117 29 133 chr17 2203948 2203998 -87300555 + AluSq SINE Alu 87 141 -172 1976 141 3 44 chr17 2203998 2204107 -87300446 + AluSx SINE Alu 4 116 -196 2092 76 10 45 chr17 2204107 2204422 -87300131 - AluY SINE Alu 0 305 1 1976 141 3 44 chr17 2204422 2204630 -87299923 + AluSx SINE Alu 116 309 -3 2338 66 0 13 chr17 2204630 2204934 -87299619 + AluY SINE Alu 1 300 -11 1111 117 29 133 chr17 2204934 2205122 -87299431 + AluSq SINE Alu 139 301 -12 194 309 62 0 chr17 2205131 2205212 -87299341 - L2 LINE L2 -775 2539 2454 2039 134 10 19 chr17 2205537 2205850 -87298703 - AluJb SINE Alu -2 310 1 2172 83 35 54 chr17 2205857 2206170 -87298383 - AluY SINE Alu -4 307 1 964 233 185 6 chr17 2206383 2206739 -87297814 + L2 LINE L2 2046 2465 -849 1199 153 42 0 chr17 2206792 2206981 -87297572 - AluJo SINE Alu -115 197 1 1173 258 132 53 chr17 2206983 2207212 -87297341 + L2 LINE L2 2466 2676 -637 2466 82 0 0 chr17 2207212 2207518 -87297035 - AluY SINE Alu -5 306 1 1173 258 132 53 chr17 2207518 2207652 -87296901 + L2 LINE L2 2676 2798 -515 2373 93 7 0 chr17 2207652 2207954 -87296599 - AluSg SINE Alu -6 304 1 2005 146 0 7 chr17 2207961 2208262 -87296291 - AluSx SINE Alu -13 299 1 1173 258 132 53 chr17 2208262 2208646 -87295907 + L2 LINE L2 2803 3313 0 2208 94 7 17 chr17 2209183 2209481 -87295072 - AluSg SINE Alu -15 295 1 889 138 15 0 chr17 2209499 2209629 -87294924 - FLAM_C SINE Alu -11 132 1 2389 58 0 52 chr17 2209903 2210212 -87294341 - AluY SINE Alu -14 297 5 1701 136 0 0 chr17 2210222 2210465 -87294088 - AluSq SINE Alu -70 243 1 904 224 5 14 chr17 2212371 2212581 -87291972 - MER6B DNA MER2_type -2 208 1 2353 96 0 3 chr17 2213009 2213311 -87291242 - AluSg SINE Alu -9 301 1 1050 142 0 0 chr17 2213322 2213477 -87291076 - AluSq SINE Alu -8 305 151 781 164 59 110 chr17 2214078 2214223 -87290330 - AluJo SINE Alu -62 250 99 2290 112 0 0 chr17 2214223 2214519 -87290034 + AluSq SINE Alu 1 296 -17 781 164 59 110 chr17 2214519 2214534 -87290019 - AluJo SINE Alu -213 99 85 1944 162 0 3 chr17 2214534 2214836 -87289717 + AluSx SINE Alu 1 301 -11 781 164 59 110 chr17 2214836 2214893 -87289660 - AluJo SINE Alu -227 85 43 273 307 81 25 chr17 2214913 2215196 -87289357 + L1ME4a LINE L1 5628 5926 -195 2159 112 31 0 chr17 2215369 2215663 -87288890 + AluSx SINE Alu 1 303 -9 813 109 23 62 chr17 2215665 2215793 -87288760 + AluSq/x SINE Alu 1 123 -189 1564 96 0 24 chr17 2215795 2216035 -87288518 + AluSg/x SINE Alu 92 310 0 2652 45 0 13 chr17 2216039 2216348 -87288205 + AluY SINE Alu 5 309 -2 239 147 0 0 chr17 2216411 2216445 -87288108 - Alu SINE Alu -94 39 6 2363 81 3 10 chr17 2217323 2217621 -87286932 - AluSp SINE Alu -17 296 1 2524 142 51 5 chr17 2218738 2219147 -87285406 + MSTA LTR MaLR 1 428 0 2587 67 0 3 chr17 2219955 2220267 -87284286 + AluY SINE Alu 1 311 0 185 347 51 20 chr17 2221625 2221723 -87282830 + L2 LINE L2 3199 3299 -14 195 291 36 0 chr17 2222594 2222649 -87281904 + L2 LINE L2 3200 3256 -16 21 0 0 0 chr17 2222847 2222868 -87281685 + AT_rich Low_complexity Low_complexity 1 21 0 213 94 0 0 chr17 2224939 2224971 -87279582 + (CGG)n Simple_repeat Simple_repeat 2 33 0 21 89 0 0 chr17 2225213 2225269 -87279284 + GC_rich Low_complexity Low_complexity 1 56 0 23 54 0 0 chr17 2225477 2225514 -87279039 + GC_rich Low_complexity Low_complexity 1 37 0 409 197 171 26 chr17 2225955 2226072 -87278481 + L2 LINE L2 3177 3310 -3 2262 86 0 0 chr17 2226192 2226471 -87278082 + AluSx SINE Alu 16 294 -18 2042 100 3 37 chr17 2226546 2226845 -87277708 + AluSg SINE Alu 1 289 -21 2135 70 56 7 chr17 2226845 2227130 -87277423 + AluY SINE Alu 1 300 -11 2174 82 43 4 chr17 2227525 2227805 -87276748 - AluSc SINE Alu -15 294 4 2401 57 0 13 chr17 2227992 2228293 -87276260 - AluY SINE Alu -13 298 2 1433 110 186 13 chr17 2228529 2228794 -87275759 - AluSg1 SINE Alu 0 306 1 1687 210 120 51 chr17 2229156 2229551 -87275002 + L1ME3A LINE L1 5512 5965 -205 2072 105 6 37 chr17 2229551 2229874 -87274679 + AluSq SINE Alu 1 313 0 1687 210 120 51 chr17 2229874 2230088 -87274465 + L1ME3A LINE L1 5965 6163 -7 2272 86 3 7 chr17 2230119 2230411 -87274142 + AluSx SINE Alu 1 291 -21 395 274 89 30 chr17 2231149 2231284 -87273269 + MER5B DNA MER1_type 1 143 -35 648 151 0 19 chr17 2231286 2231392 -87273161 - MER5A DNA MER1_type -1 188 85 449 301 24 48 chr17 2231967 2232176 -87272377 - L2 LINE L2 -2 3311 3108 525 255 123 19 chr17 2232200 2232412 -87272141 + MIR SINE MIR 22 255 -7 1108 44 7 15 chr17 2232640 2232776 -87271777 + AluSq/x SINE Alu 1 135 -178 2505 42 0 13 chr17 2232776 2233082 -87271471 + AluY SINE Alu 1 302 -9 295 238 69 30 chr17 2233083 2233184 -87271369 - Charlie8 DNA MER1_type -2312 105 1 1590 158 3 38 chr17 2234288 2234580 -87269973 + AluJo SINE Alu 1 282 -30 2062 94 0 14 chr17 2234581 2234895 -87269658 - AluSx SINE Alu 0 310 1 22 0 0 0 chr17 2234898 2234920 -87269633 + AT_rich Low_complexity Low_complexity 1 22 0 701 199 0 15 chr17 2235125 2235261 -87269292 - FLAM_A SINE Alu -1 141 8 434 132 92 0 chr17 2235818 2235894 -87268659 + FLAM SINE Alu 42 124 -19 256 237 129 11 chr17 2236062 2236155 -87268398 + MIR SINE MIR 17 120 -142 1660 117 11 25 chr17 2236256 2236565 -87267988 - AluJb SINE Alu 0 310 6 1993 119 3 7 chr17 2236600 2236893 -87267660 + AluSx SINE Alu 1 292 -20 605 196 110 83 chr17 2236987 2237288 -87267265 + L1MC5 LINE L1 7605 7913 -48 2348 60 0 10 chr17 2237299 2237600 -87266953 - AluY SINE Alu -13 298 1 991 111 7 0 chr17 2237600 2237735 -87266818 - AluSq/x SINE Alu -176 136 1 379 276 39 103 chr17 2237736 2237845 -87266708 - L2 LINE L2 -1635 1679 1591 2134 114 0 25 chr17 2237845 2238161 -87266392 + AluSx SINE Alu 5 312 0 379 276 39 103 chr17 2238161 2238283 -87266270 - L2 LINE L2 -1723 1591 1463 347 271 43 129 chr17 2238289 2238491 -87266062 - MIR SINE MIR -7 255 78 2134 99 0 7 chr17 2238491 2238783 -87265770 + AluSx SINE Alu 6 295 -17 347 271 43 129 chr17 2238783 2238835 -87265718 - MIR SINE MIR -184 78 23 965 145 12 18 chr17 2239168 2239334 -87265219 - AluSx SINE Alu -101 211 47 2682 19 0 6 chr17 2240295 2240608 -87263945 - AluY SINE Alu 0 311 1 419 290 93 52 chr17 2240943 2241017 -87263536 - L1MC4a LINE L1 -1633 6175 6106 1244 192 0 64 chr17 2241017 2241330 -87263223 + AluSx SINE Alu 1 293 -9 419 290 93 52 chr17 2241330 2241448 -87263105 - L1MC4a LINE L1 -1702 6106 5975 1787 174 13 7 chr17 2241455 2241760 -87262793 - AluJo SINE Alu -5 307 1 1006 68 8 8 chr17 2241770 2241902 -87262651 - AluY SINE Alu -179 132 1 500 301 130 17 chr17 2241905 2242326 -87262227 - L1MC4a LINE L1 -344 5822 5497 683 121 16 8 chr17 2244939 2245063 -87259490 + L1PB1 LINE L1 5742 5866 -285 2166 110 3 10 chr17 2245063 2245372 -87259181 - AluSq SINE Alu -6 307 1 1574 180 3 17 chr17 2246005 2246299 -87258254 + AluJb SINE Alu 1 290 -22 2175 87 0 13 chr17 2246444 2246755 -87257798 - AluY SINE Alu 0 311 5 1848 125 3 26 chr17 2247656 2247961 -87256592 + AluSx SINE Alu 4 301 -11 224 296 56 0 chr17 2248218 2248289 -87256264 - MIR3 SINE MIR -50 158 84 328 281 66 33 chr17 2248404 2248525 -87256028 + MIR SINE MIR 17 141 -67 2186 100 7 3 chr17 2253433 2253734 -87250819 - AluSg SINE Alu -8 302 1 285 383 14 16 chr17 2255705 2255855 -87248698 + MIR3 SINE MIR 4 136 -72 223 240 20 0 chr17 2257023 2257073 -87247480 + CT-rich Low_complexity Low_complexity 2 52 0 443 275 54 72 chr17 2259282 2259504 -87245049 + MIR SINE MIR 28 245 -17 248 309 74 9 chr17 2259685 2259793 -87244760 - MIR SINE MIR -60 148 33 190 369 16 41 chr17 2261416 2261538 -87243015 + MIR SINE MIR 83 201 -61 406 239 17 34 chr17 2261605 2261722 -87242831 + MIR SINE MIR 17 131 -77 1677 176 0 22 chr17 2262111 2262430 -87242123 + AluJb SINE Alu 1 312 0 2090 82 0 26 chr17 2265065 2265370 -87239183 + AluSg SINE Alu 1 297 -13 331 282 69 23 chr17 2265893 2266024 -87238529 - MER5B DNA MER1_type 0 178 42 668 172 0 83 chr17 2266027 2266172 -87238381 + FLAM_C SINE Alu 1 133 0 1510 131 173 19 chr17 2266181 2266441 -87238112 + AluSg SINE Alu 1 300 0 185 304 0 0 chr17 2266467 2266513 -87238040 + MER5B DNA MER1_type 131 176 -2 507 148 0 0 chr17 2266796 2266884 -87237669 + (CCCCAG)n Simple_repeat Simple_repeat 3 90 0 192 97 0 0 chr17 2269678 2269709 -87234844 + (CAGA)n Simple_repeat Simple_repeat 4 34 0 1302 186 45 11 chr17 2269709 2269978 -87234575 - AluJo SINE Alu -34 278 1 189 292 62 15 chr17 2270574 2270639 -87233914 + L2 LINE L2 3190 3257 -15 1992 91 0 24 chr17 2270802 2271099 -87233454 - AluSx SINE Alu -22 290 1 378 290 38 26 chr17 2271666 2271837 -87232716 + MIR SINE MIR 38 209 -53 360 64 0 0 chr17 2272573 2272620 -87231933 + (TG)n Simple_repeat Simple_repeat 2 48 0 212 194 11 86 chr17 2275493 2275586 -87228967 + G-rich Low_complexity Low_complexity 2 87 0 2264 100 3 3 chr17 2277308 2277618 -87226935 - AluSp SINE Alu -3 310 1 1372 187 98 32 chr17 2278398 2278714 -87225839 + MER1B DNA MER1_type 1 337 0 2059 79 0 26 chr17 2279057 2279360 -87225193 - AluSx SINE Alu -17 295 1 219 287 44 52 chr17 2279499 2279635 -87224918 - L3b LINE CR1 -134 1449 1315 620 157 8 60 chr17 2279878 2280012 -87224541 - FLAM_A SINE Alu -2 131 5 220 350 29 10 chr17 2280068 2280171 -87224382 + L2 LINE L2 2957 3061 -211 246 185 33 43 chr17 2282019 2282111 -87222442 + G-rich Low_complexity Low_complexity 6 96 0 259 75 0 25 chr17 2282373 2282413 -87222140 + (CA)n Simple_repeat Simple_repeat 1 39 0 308 297 0 43 chr17 2283324 2283462 -87221091 + G-rich Low_complexity Low_complexity 4 135 0 196 260 0 55 chr17 2283721 2283794 -87220759 - L2 LINE L2 -41 3272 3204 203 267 17 17 chr17 2284119 2284179 -87220374 - MIR SINE MIR -71 137 78 209 259 35 12 chr17 2287107 2287192 -87217361 + C-rich Low_complexity Low_complexity 6 92 0 23 68 0 0 chr17 2288915 2288959 -87215594 + GC_rich Low_complexity Low_complexity 1 44 0 205 154 0 58 chr17 2289150 2289202 -87215351 + CT-rich Low_complexity Low_complexity 1 49 0 22 35 0 0 chr17 2289286 2289315 -87215238 + GC_rich Low_complexity Low_complexity 1 29 0 26 74 0 0 chr17 2290315 2290369 -87214184 + GC_rich Low_complexity Low_complexity 1 54 0 262 206 44 21 chr17 2290490 2290577 -87213976 - MIR SINE MIR -57 151 87 315 246 0 14 chr17 2291627 2291696 -87212857 + Tigger5 DNA MER2_type 1 68 -2255 2081 91 0 86 chr17 2292242 2292581 -87211972 + AluSx SINE Alu 1 310 -2 2466 84 0 7 chr17 2292929 2293237 -87211316 - AluSx SINE Alu -6 306 1 216 219 31 47 chr17 2293804 2293868 -87210685 - L2 LINE L2 -4 3268 3206 902 220 162 24 chr17 2294053 2294349 -87210204 - MER2 DNA MER2_type -8 337 1 728 147 7 29 chr17 2294636 2294772 -87209781 + FLAM_A SINE Alu 1 133 0 385 286 135 23 chr17 2296078 2296302 -87208251 + L1M4 LINE L1 2915 3113 -3033 2146 89 0 71 chr17 2296302 2296638 -87207915 + AluSx SINE Alu 1 312 0 2417 82 0 0 chr17 2296644 2296938 -87207615 + AluSg SINE Alu 1 294 -16 2767 22 0 16 chr17 2296947 2297263 -87207290 + AluY SINE Alu 1 311 0 385 286 135 23 chr17 2297263 2297312 -87207241 + L1M4 LINE L1 3124 5205 -941 595 165 0 10 chr17 2298296 2298399 -87206154 - FLAM_C SINE Alu -40 103 2 2258 85 10 7 chr17 2298435 2298730 -87205823 - AluSp SINE Alu -17 296 1 2273 49 3 21 chr17 2298755 2299079 -87205474 + AluY SINE Alu 2 320 0 2295 108 0 3 chr17 2299105 2299411 -87205142 + AluSc SINE Alu 1 305 -4 181 246 0 18 chr17 2299901 2299958 -87204595 + L3 LINE CR1 1145 1200 -377 1871 171 0 13 chr17 2300177 2300486 -87204067 - AluJb SINE Alu -7 305 1 523 287 14 0 chr17 2300507 2300650 -87203903 + Charlie8 DNA MER1_type 88 232 -2185 2208 92 3 22 chr17 2300656 2300972 -87203581 - AluSx SINE Alu -2 310 1 2097 102 10 14 chr17 2301084 2301379 -87203174 + AluSq SINE Alu 1 294 -19 21 43 0 0 chr17 2301886 2301909 -87202644 + AT_rich Low_complexity Low_complexity 1 23 0 2249 53 35 11 chr17 2302090 2302373 -87202180 - AluSx SINE Alu -22 290 1 229 230 23 69 chr17 2302726 2302813 -87201740 + MIR SINE MIR 47 129 -133 2422 83 0 13 chr17 2304280 2304593 -87199960 - AluSg SINE Alu -1 309 1 325 260 67 80 chr17 2304775 2304925 -87199628 + L1ME4a LINE L1 5962 6109 -12 2255 88 20 7 chr17 2305876 2306181 -87198372 - AluSx SINE Alu -3 309 1 425 254 135 44 chr17 2306418 2306670 -87197883 + L1ME4a LINE L1 5845 6119 -2 243 0 0 0 chr17 2307020 2307047 -87197506 + (CA)n Simple_repeat Simple_repeat 2 28 0 1998 120 3 20 chr17 2307132 2307431 -87197122 + AluSq SINE Alu 1 294 -19 186 133 0 0 chr17 2309508 2309538 -87195015 + (A)n Simple_repeat Simple_repeat 1 30 0 1417 210 0 30 chr17 2309942 2310247 -87194306 + AluJo SINE Alu 17 312 0 2145 98 0 77 chr17 2310897 2311224 -87193329 + AluSq SINE Alu 2 303 -10 2004 85 48 7 chr17 2311248 2311542 -87193011 - AluSc SINE Alu 0 305 1 1477 112 12 89 chr17 2311574 2311912 -87192641 + AluSx SINE Alu 1 312 0 378 0 0 0 chr17 2312163 2312205 -87192348 + (TG)n Simple_repeat Simple_repeat 2 43 0 2611 0 0 14 chr17 2312991 2313320 -87191233 - AluYa5 SINE Alu 0 325 1 401 204 0 11 chr17 2313367 2313455 -87191098 - AluJ/FLAM SINE Alu -210 92 6 2338 94 0 3 chr17 2313576 2313873 -87190680 + AluY SINE Alu 1 296 -15 189 0 0 0 chr17 2314521 2314542 -87190011 + (CAAA)n Simple_repeat Simple_repeat 4 24 0 1515 151 0 4 chr17 2314593 2314818 -87189735 - AluJb SINE Alu -5 307 84 622 216 0 24 chr17 2315148 2315273 -87189280 - FLAM_A SINE Alu -11 122 1 2329 102 0 10 chr17 2315366 2315679 -87188874 + AluSg SINE Alu 1 310 0 310 271 90 48 chr17 2315681 2315773 -87188780 + L1MC4a LINE L1 5882 5986 -1822 1847 142 0 41 chr17 2315773 2316089 -87188464 + AluSx SINE Alu 1 303 -9 310 271 90 48 chr17 2316089 2316162 -87188391 + L1MC4a LINE L1 5986 6054 -1754 813 150 0 16 chr17 2316539 2316666 -87187887 - FLAM_A SINE Alu -10 132 8 1003 143 0 26 chr17 2316764 2316918 -87187635 + AluJb SINE Alu 2 151 -161 282 206 0 0 chr17 2316951 2317014 -87187539 + GA-rich Low_complexity Low_complexity 5 67 0 832 270 64 22 chr17 2317054 2317365 -87187188 + L1MC4 LINE L1 6701 7024 -1018 899 80 0 16 chr17 2317365 2317490 -87187063 + Alu SINE Alu 189 311 0 351 0 0 0 chr17 2317497 2317536 -87187017 + (TA)n Simple_repeat Simple_repeat 2 40 0 867 101 0 43 chr17 2317548 2317686 -87186867 + FLAM_C SINE Alu 2 133 0 1251 168 17 138 chr17 2317737 2317779 -87186774 + L1MC5 LINE L1 6972 7017 -944 2409 91 3 3 chr17 2317779 2318087 -87186466 - AluSp SINE Alu -1 312 5 1251 168 17 138 chr17 2318087 2318135 -87186418 + L1MC5 LINE L1 7017 7069 -892 2206 97 35 0 chr17 2318135 2318424 -87186129 - AluSx SINE Alu -13 299 1 1251 168 17 138 chr17 2318424 2318744 -87185809 + L1MC5 LINE L1 7069 7333 -628 2231 75 0 24 chr17 2318749 2319044 -87185509 - AluSx SINE Alu -14 298 11 1233 153 16 0 chr17 2319058 2319241 -87185312 - AluJo SINE Alu -17 295 110 2552 38 0 19 chr17 2319349 2319662 -87184891 - AluY SINE Alu -4 307 1 22 56 0 0 chr17 2319665 2319701 -87184852 + AT_rich Low_complexity Low_complexity 1 36 0 21 0 0 0 chr17 2319873 2319894 -87184659 + AT_rich Low_complexity Low_complexity 1 21 0 2099 130 0 10 chr17 2319894 2320194 -87184359 - AluSq SINE Alu -16 297 1 1276 210 122 50 chr17 2320195 2320672 -87183881 - L1ME3A LINE L1 -289 5881 5371 23 0 0 0 chr17 2320674 2320697 -87183856 + AT_rich Low_complexity Low_complexity 1 23 0 2164 100 0 32 chr17 2320898 2321207 -87183346 - AluY SINE Alu -12 299 1 1743 165 7 23 chr17 2321244 2321547 -87183006 + AluJb SINE Alu 1 298 -14 527 104 104 0 chr17 2321548 2321644 -87182909 - MER85 DNA T2_type -33 106 1 624 159 102 68 chr17 2321746 2321922 -87182631 - MIR SINE MIR 0 262 81 1914 109 6 61 chr17 2323180 2323492 -87181061 - AluSx SINE Alu -17 295 1 1915 131 0 45 chr17 2325877 2326189 -87178364 - AluJb SINE Alu -12 300 3 2213 126 7 0 chr17 2326551 2326860 -87177693 - AluSx SINE Alu -1 311 1 2269 84 30 7 chr17 2327512 2327809 -87176744 - AluSx SINE Alu -8 304 1 1700 166 0 27 chr17 2328135 2328431 -87176122 - AluJo SINE Alu -24 288 1 193 352 46 0 chr17 2328522 2328630 -87175923 + MIR3 SINE MIR 44 156 -52 31 0 0 0 chr17 2328646 2328677 -87175876 + AT_rich Low_complexity Low_complexity 1 31 0 22 35 0 0 chr17 2328794 2328823 -87175730 + AT_rich Low_complexity Low_complexity 1 29 0 838 150 8 8 chr17 2328927 2329054 -87175499 + AluJo/FLAM SINE Alu 1 127 -185 1254 202 4 50 chr17 2329054 2329277 -87175276 + AluJo SINE Alu 57 268 -44 2459 65 0 3 chr17 2329277 2329570 -87174983 - AluSc SINE Alu -17 292 1 1254 202 4 50 chr17 2329570 2329604 -87174949 + AluJo SINE Alu 268 302 -10 251 176 0 27 chr17 2329610 2329684 -87174869 + L1PB4 LINE L1 4974 5045 -1101 1985 153 7 7 chr17 2329716 2330057 -87174496 + AluJo SINE Alu 5 345 0 1652 196 56 39 chr17 2330068 2330482 -87174071 + L1PB4 LINE L1 5733 6153 -3 180 0 0 0 chr17 2330791 2330811 -87173742 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 672 337 42 12 chr17 2331167 2331502 -87173051 + L1ME1 LINE L1 19 363 -6033 626 219 85 83 chr17 2331494 2331869 -87172684 + L1ME1 LINE L1 3155 3530 -2685 * 1039 161 12 0 chr17 2331869 2332031 -87172522 - AluSg/x SINE Alu -15 295 132 1929 106 66 15 chr17 2332031 2332304 -87172249 - AluSg SINE Alu -17 293 7 732 197 31 44 chr17 2332370 2332523 -87172030 + L1ME1 LINE L1 3588 3739 -2476 2225 89 0 48 chr17 2332523 2332839 -87171714 - AluY SINE Alu -10 301 1 732 197 31 44 chr17 2332839 2332913 -87171640 + L1ME1 LINE L1 3739 3812 -2403 970 150 79 22 chr17 2332914 2333141 -87171412 + L1MA7 LINE L1 5988 6227 -64 1746 153 32 29 chr17 2333141 2333226 -87171327 + MER7C DNA MER2_type 1 84 -2944 1791 119 60 11 chr17 2333226 2333533 -87171020 + AluSx SINE Alu 1 320 0 1746 153 32 29 chr17 2333533 2333759 -87170794 + MER7C DNA MER2_type 84 314 -288 2071 111 0 20 chr17 2333759 2334065 -87170488 - AluSx SINE Alu -12 300 1 617 194 15 30 chr17 2334067 2334201 -87170352 - AluJo/FLAM SINE Alu -170 132 1 1146 150 120 45 chr17 2334203 2334470 -87170083 + MER7C DNA MER2_type 316 602 0 333 108 15 0 chr17 2334470 2334535 -87170018 + L1MA7 LINE L1 6226 6291 0 2170 125 0 3 chr17 2334561 2334850 -87169703 + AluSx SINE Alu 7 294 -18 30 0 0 0 chr17 2334850 2334880 -87169673 + AT_rich Low_complexity Low_complexity 1 30 0 2027 190 21 104 chr17 2334899 2335552 -87169001 + L1ME1 LINE L1 3799 4397 -1818 645 144 0 0 chr17 2335557 2335647 -87168906 + AluSc SINE Alu 2 91 -218 297 0 0 0 chr17 2335647 2335680 -87168873 + (TCTCCC)n Simple_repeat Simple_repeat 5 37 0 4554 87 60 59 chr17 2335686 2336502 -87168051 + SVA Other Other 50 866 -520 1199 82 27 50 chr17 2336531 2336957 -87167596 + SVA Other Other 635 866 -555 5776 52 10 24 chr17 2337028 2337900 -87166653 + SVA Other Other 592 1452 0 1756 73 0 0 chr17 2337900 2338120 -87166433 + AluSc SINE Alu 80 299 -10 1089 193 162 9 chr17 2338132 2338453 -87166100 + L1ME1 LINE L1 4387 4756 -1459 812 164 0 0 chr17 2338454 2338582 -87165971 - FLAM_C SINE Alu -15 128 1 603 217 80 6 chr17 2338602 2338777 -87165776 + L1ME1 LINE L1 4750 4937 -1278 2294 225 130 15 chr17 2338793 2339623 -87164930 + L1ME1 LINE L1 5238 6195 -40 1937 120 7 13 chr17 2340423 2340732 -87163821 + AluSx SINE Alu 4 310 -2 1925 133 31 0 chr17 2340948 2341241 -87163312 + AluJb SINE Alu 1 302 -10 1746 214 107 137 chr17 2341720 2341934 -87162619 - L1MC4 LINE L1 -3 8039 7820 1951 118 3 19 chr17 2341934 2342247 -87162306 - AluSx SINE Alu 0 312 5 1746 214 107 137 chr17 2342247 2343342 -87161211 - L1MC4 LINE L1 -222 7820 6698 1996 119 3 10 chr17 2343665 2343968 -87160585 - AluSx SINE Alu -11 301 1 1115 121 0 6 chr17 2344023 2344189 -87160364 - AluSg/x SINE Alu -10 300 136 2211 90 7 3 chr17 2344193 2344493 -87160060 - AluSx SINE Alu -11 301 1 1667 164 0 17 chr17 2344805 2345095 -87159458 + AluJb SINE Alu 1 287 -25 194 0 0 37 chr17 2345095 2345122 -87159431 + (TTAA)n Simple_repeat Simple_repeat 1 26 0 1533 159 29 14 chr17 2345603 2345880 -87158673 - AluJo SINE Alu -29 283 3 830 180 56 11 chr17 2345897 2346075 -87158478 - AluSg/x SINE Alu -6 304 119 2349 54 0 22 chr17 2346167 2346480 -87158073 + AluY SINE Alu 1 306 -5 2153 93 0 17 chr17 2346542 2346843 -87157710 + AluSx SINE Alu 1 296 -16 263 186 129 0 chr17 2346890 2346960 -87157593 - MIR SINE MIR -59 203 125 1689 188 0 0 chr17 2347011 2347298 -87157255 - AluJb SINE Alu -25 287 1 24 0 0 0 chr17 2347520 2347544 -87157009 + AT_rich Low_complexity Low_complexity 1 24 0 1472 173 0 14 chr17 2347553 2347831 -87156722 + AluSx SINE Alu 5 278 -34 243 61 0 0 chr17 2347831 2347864 -87156689 + (CA)n Simple_repeat Simple_repeat 2 34 0 2060 127 3 0 chr17 2347929 2348228 -87156325 - AluJb SINE Alu -10 302 3 235 234 206 28 chr17 2348391 2348498 -87156055 + MIR SINE MIR 17 142 -66 2060 97 3 7 chr17 2348847 2349137 -87155416 + AluSp SINE Alu 1 289 -24 2283 89 0 3 chr17 2349734 2350037 -87154516 + AluSp SINE Alu 1 302 -11 1607 143 0 44 chr17 2350203 2350528 -87154025 + AluSx SINE Alu 1 312 0 2200 93 0 7 chr17 2350711 2351013 -87153540 - AluSx SINE Alu -12 300 1 2559 169 61 21 chr17 2351106 2351591 -87152962 + L1MB2 LINE L1 5621 6130 -41 2137 130 128 16 chr17 2351591 2351975 -87152578 + MSTA LTR MaLR 2 428 0 2559 169 61 21 chr17 2351975 2352011 -87152542 + L1MB2 LINE L1 6130 6163 -8 1925 131 0 19 chr17 2352592 2352906 -87151647 - AluSg SINE Alu -2 308 1 1743 110 27 40 chr17 2352991 2353291 -87151262 + AluSq SINE Alu 1 296 -17 1858 157 23 17 chr17 2353888 2354413 -87150140 + L1M4 LINE L1 4958 5486 -692 2230 83 0 16 chr17 2354416 2354728 -87149825 + AluY SINE Alu 1 307 -4 1500 144 0 32 chr17 2354750 2355028 -87149525 + AluSx SINE Alu 11 279 -33 2190 106 0 7 chr17 2355076 2355379 -87149174 + AluSx SINE Alu 1 301 -11 384 310 76 25 chr17 2355532 2355729 -87148824 + MLT1K LTR MaLR 348 554 -34 864 186 69 0 chr17 2355741 2355929 -87148624 + MER2 DNA MER2_type 9 209 -136 1600 150 36 39 chr17 2355958 2356265 -87148288 - AluJb SINE Alu 0 312 7 286 122 37 183 chr17 2356269 2356351 -87148202 + MER2 DNA MER2_type 273 342 -3 534 223 9 18 chr17 2356402 2356514 -87148039 + FLAM_A SINE Alu 5 115 -27 26 50 0 0 chr17 2356514 2356554 -87147999 + AT_rich Low_complexity Low_complexity 1 40 0 2157 101 0 7 chr17 2356595 2356892 -87147661 - AluSg SINE Alu -15 295 1 1699 172 89 3 chr17 2357106 2357420 -87147133 + MER7A DNA MER2_type 8 346 0 436 215 0 0 chr17 2357420 2357499 -87147054 + MLT1F LTR MaLR 17 95 -472 * 1138 245 50 7 chr17 2357490 2357765 -87146788 + MLT1F LTR MaLR 212 501 -41 1482 200 3 27 chr17 2357765 2358065 -87146488 + AluJo SINE Alu 1 293 -19 2061 122 0 10 chr17 2358120 2358431 -87146122 + AluSx SINE Alu 2 309 -3 237 245 0 0 chr17 2358435 2358488 -87146065 + MLT1F LTR MaLR 490 542 0 603 300 74 65 chr17 2358712 2358986 -87145567 - L1ME4a LINE L1 -95 6026 5756 2338 53 0 30 chr17 2358986 2359290 -87145263 - AluY SINE Alu -16 295 1 1824 125 20 16 chr17 2359290 2359461 -87145092 - AluSx SINE Alu -7 305 130 210 37 0 0 chr17 2359461 2359488 -87145065 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1824 125 20 16 chr17 2359488 2359619 -87144934 - AluSx SINE Alu -182 130 1 603 300 74 65 chr17 2359619 2359913 -87144640 - L1ME4a LINE L1 -364 5757 5452 381 72 0 119 chr17 2360214 2360306 -87144247 - Alu SINE Alu -240 61 1 756 179 0 21 chr17 2360324 2360469 -87144084 - FLAM_C SINE Alu 0 143 2 1248 182 104 7 chr17 2360644 2360780 -87143773 + AluSx SINE Alu 1 122 -190 2232 99 7 0 chr17 2360780 2361083 -87143470 + AluSq SINE Alu 1 305 -8 1248 182 104 7 chr17 2361083 2361215 -87143338 + AluSx SINE Alu 122 295 -17 295 139 0 0 chr17 2361404 2361447 -87143106 + Alu SINE Alu 249 291 -11 204 292 0 0 chr17 2361499 2361547 -87143006 + L2 LINE L2 3223 3270 -2 1873 156 20 0 chr17 2361576 2361877 -87142676 + AluSx SINE Alu 1 307 -5 2223 103 0 0 chr17 2361877 2362188 -87142365 + AluSx SINE Alu 1 311 -1 773 191 157 55 chr17 2362198 2362434 -87142119 - MLT1A1 LTR MaLR -19 346 87 1876 128 14 3 chr17 2362614 2362902 -87141651 - AluSx SINE Alu -21 291 1 2960 213 8 34 chr17 2362992 2363608 -87140945 + MER82 DNA MER2_type 2 601 -52 1535 167 47 7 chr17 2363608 2363884 -87140669 + AluJb SINE Alu 1 287 -25 1025 142 0 11 chr17 2364074 2364250 -87140303 + AluSg/x SINE Alu 139 312 0 485 260 115 35 chr17 2364266 2364466 -87140087 + MIR SINE MIR 20 235 -27 1100 237 67 6 chr17 2364577 2364919 -87139634 + L1MC/D LINE L1 4902 5264 -882 847 138 0 36 chr17 2364919 2365057 -87139496 + AluSq/x SINE Alu 1 133 -180 721 198 35 108 chr17 2365063 2365217 -87139336 + L1MC/D LINE L1 5319 5448 -911 1860 73 84 15 chr17 2365217 2365491 -87139062 + AluY SINE Alu 1 293 -18 721 198 35 108 chr17 2365491 2365594 -87138959 + L1MC/D LINE L1 5448 5557 -802 288 107 321 0 chr17 2365700 2365756 -87138797 + Tigger1 DNA MER2_type 159 232 -2186 795 167 30 0 chr17 2365790 2365922 -87138631 + FRAM SINE Alu 27 162 -14 1590 95 5 5 chr17 2365922 2366144 -87138409 + AluSc SINE Alu 1 222 -87 1479 118 54 71 chr17 2366146 2366272 -87138281 + Tigger1 DNA MER2_type 1454 1581 -837 1386 175 74 7 chr17 2366272 2366557 -87137996 + AluJb SINE Alu 1 304 -8 1479 118 54 71 chr17 2366557 2366619 -87137934 + Tigger1 DNA MER2_type 1581 1643 -775 2234 99 0 0 chr17 2366619 2366922 -87137631 + AluSg SINE Alu 1 303 -7 1479 118 54 71 chr17 2366922 2367028 -87137525 + Tigger1 DNA MER2_type 1643 1744 -674 2048 115 6 13 chr17 2367031 2367318 -87137235 + AluSx SINE Alu 1 287 -25 183 80 0 0 chr17 2367318 2367343 -87137210 + (CA)n Simple_repeat Simple_repeat 2 26 0 2048 115 6 13 chr17 2367343 2367368 -87137185 + AluSx SINE Alu 287 311 -1 1119 97 0 0 chr17 2367601 2367756 -87136797 + AluSg/x SINE Alu 150 304 -8 1433 124 0 10 chr17 2367908 2368109 -87136444 - MER1B DNA MER1_type 0 339 141 2150 92 10 3 chr17 2368553 2368859 -87135694 - AluY SINE Alu -3 308 1 513 103 23 11 chr17 2368875 2368962 -87135591 - AluY SINE Alu -180 131 44 1166 138 0 6 chr17 2369219 2369400 -87135153 + AluSg/x SINE Alu 128 307 -5 21 0 0 0 chr17 2369465 2369486 -87135067 + AT_rich Low_complexity Low_complexity 1 21 0 197 269 128 26 chr17 2370124 2370202 -87134351 + MIR SINE MIR 106 191 -71 366 249 45 104 chr17 2371236 2371311 -87133242 + MER5A DNA MER1_type 1 79 -110 2205 113 0 0 chr17 2371311 2371613 -87132940 + AluSp SINE Alu 1 302 -11 2207 96 7 0 chr17 2371623 2371925 -87132628 + AluSg SINE Alu 1 304 -6 366 249 45 104 chr17 2371925 2372039 -87132514 + MER5A DNA MER1_type 88 189 0 338 319 46 0 chr17 2372181 2372310 -87132243 + L1MC/D LINE L1 5684 5818 -352 1823 118 0 58 chr17 2372322 2372635 -87131918 + AluJb SINE Alu 3 297 -15 1635 86 52 0 chr17 2372639 2372872 -87131681 + AluY SINE Alu 1 245 -66 1370 105 0 10 chr17 2372972 2373172 -87131381 + AluSc SINE Alu 102 299 -10 2074 90 4 4 chr17 2373179 2373456 -87131097 + AluSc SINE Alu 1 277 -32 260 83 21 0 chr17 2373459 2373507 -87131046 + (TAAA)n Simple_repeat Simple_repeat 2 50 0 1688 129 0 0 chr17 2373941 2374181 -87130372 + AluSx SINE Alu 52 291 -21 702 208 120 5 chr17 2374192 2374384 -87130169 + L1ME1 LINE L1 5742 5955 -211 1787 177 0 0 chr17 2374384 2374678 -87129875 + AluJb SINE Alu 1 294 -18 2249 65 24 0 chr17 2374821 2375111 -87129442 - AluY SINE Alu -14 297 1 2173 123 0 0 chr17 2375111 2375419 -87129134 - AluSx SINE Alu -4 308 1 1030 277 89 48 chr17 2375425 2375746 -87128807 - HAL1 LINE L1 0 2507 2201 2203 86 3 10 chr17 2375746 2376049 -87128504 - AluSp SINE Alu -12 301 1 1030 277 89 48 chr17 2376049 2376409 -87128144 - HAL1 LINE L1 -306 2201 1798 365 245 126 7 chr17 2376449 2376592 -87127961 - L1ME4a LINE L1 -16 6105 5946 235 250 18 0 chr17 2376881 2376937 -87127616 + MER3 DNA MER1_type 34 90 -119 * 257 117 33 50 chr17 2376901 2376961 -87127592 - MER3 DNA MER1_type -7 202 144 2023 109 0 36 chr17 2376964 2377267 -87127286 - AluSq SINE Alu -21 292 1 1625 122 0 4 chr17 2377269 2377506 -87127047 - AluSx SINE Alu -23 289 54 984 118 24 18 chr17 2377619 2377789 -87126764 + L1MB4 LINE L1 6009 6179 -1 1568 159 0 53 chr17 2377924 2378256 -87126297 - AluJo SINE Alu 0 316 1 31 26 0 0 chr17 2378520 2378558 -87125995 + AT_rich Low_complexity Low_complexity 1 38 0 205 294 165 0 chr17 2378650 2378759 -87125794 + L2 LINE L2 2442 2568 -746 946 178 146 66 chr17 2378787 2379074 -87125479 - AluJo SINE Alu 0 312 3 327 310 103 54 chr17 2379076 2379337 -87125216 + L2 LINE L2 2616 2889 -425 920 68 0 0 chr17 2379358 2379476 -87125077 - AluSc SINE Alu -17 292 175 284 256 64 76 chr17 2379480 2379652 -87124901 + L2 LINE L2 2941 3110 -162 935 116 123 0 chr17 2379787 2379933 -87124620 - AluSq SINE Alu -149 164 1 501 273 56 0 chr17 2379948 2380109 -87124444 + L1ME LINE L1 5654 5823 -298 1636 71 0 0 chr17 2380110 2380320 -87124233 - AluY SINE Alu -7 304 95 1127 66 0 26 chr17 2380321 2380472 -87124081 - AluY SINE Alu -164 147 1 2221 87 3 7 chr17 2380472 2380772 -87123781 - AluSq SINE Alu -14 299 1 1217 128 0 0 chr17 2382178 2382358 -87122195 - AluSg/x SINE Alu 0 312 133 657 181 60 15 chr17 2382358 2382491 -87122062 + AluJo SINE Alu 14 152 -160 1951 101 3 18 chr17 2382693 2383006 -87121547 + AluSq SINE Alu 4 312 0 2219 96 0 3 chr17 2383862 2384163 -87120390 + AluSg SINE Alu 1 300 -10 405 80 0 0 chr17 2384529 2384579 -87119974 + Alu SINE Alu 1 50 -250 1235 52 0 0 chr17 2384579 2384732 -87119821 + AluY SINE Alu 152 304 -7 363 23 0 0 chr17 2384743 2384787 -87119766 + (CA)n Simple_repeat Simple_repeat 2 45 0 1866 156 0 7 chr17 2384971 2385279 -87119274 - AluJb SINE Alu -6 306 1 394 156 0 0 chr17 2385388 2385452 -87119101 - Alu SINE Alu -3 297 234 1411 116 4 42 chr17 2385553 2385794 -87118759 + AluSg/x SINE Alu 71 302 -8 2242 91 0 0 chr17 2386121 2386419 -87118134 - AluSx SINE Alu -13 299 2 952 152 0 43 chr17 2386439 2386623 -87117930 - AluSg/x SINE Alu 0 312 137 1712 163 27 3 chr17 2386630 2386930 -87117623 - AluJo SINE Alu -5 307 1 341 320 8 40 chr17 2387408 2387533 -87117020 + MIR3 SINE MIR 41 161 -47 232 219 0 0 chr17 2387535 2387576 -87116977 + AluJ/monomer SINE Alu 2 42 -260 2113 109 10 3 chr17 2387576 2387880 -87116673 + AluSx SINE Alu 1 306 -6 332 125 0 0 chr17 2388297 2388353 -87116200 - Alu SINE Alu 0 302 247 351 284 24 16 chr17 2388545 2388672 -87115881 - MLT1L LTR MaLR -2 613 486 314 54 0 0 chr17 2388876 2388913 -87115640 + U2 snRNA snRNA 1 37 -151 2015 97 18 0 chr17 2388992 2389116 -87115437 + AluY SINE Alu 1 121 -209 189 0 0 0 chr17 2389116 2389137 -87115416 + (CA)n Simple_repeat Simple_repeat 2 22 0 2015 97 18 0 chr17 2389137 2389337 -87115216 + AluY SINE Alu 121 330 0 1825 114 11 7 chr17 2389337 2389618 -87114935 + AluSq SINE Alu 1 282 -31 757 122 28 0 chr17 2389664 2389771 -87114782 - FLAM_C SINE Alu -32 111 2 710 249 152 91 chr17 2390014 2390496 -87114057 - MLT1H LTR MaLR 0 549 39 1135 147 0 0 chr17 2390512 2390689 -87113864 + AluSg/x SINE Alu 134 310 0 826 78 5 63 chr17 2391109 2391300 -87113253 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 2065 125 3 0 chr17 2391300 2391635 -87112918 - AluSp SINE Alu 0 336 1 24 0 0 0 chr17 2391771 2391795 -87112758 + AT_rich Low_complexity Low_complexity 1 24 0 1964 129 3 10 chr17 2391865 2392160 -87112393 - AluSx SINE Alu -19 293 1 1747 141 7 11 chr17 2392249 2392561 -87111992 - AluSg SINE Alu 0 311 1 675 167 0 111 chr17 2392561 2392573 -87111980 - AluJo SINE Alu -167 145 133 1873 138 0 7 chr17 2392573 2392870 -87111683 - AluSq SINE Alu -18 295 1 675 167 0 111 chr17 2392870 2393019 -87111534 - AluJo SINE Alu -179 133 2 320 314 95 57 chr17 2393562 2393858 -87110695 + L2 LINE L2 2449 2755 -559 392 171 49 12 chr17 2393870 2393952 -87110601 - MIR SINE MIR -5 257 173 316 271 0 24 chr17 2393981 2394066 -87110487 - MIR SINE MIR -178 84 2 1091 314 31 110 chr17 2394295 2394467 -87110086 - AluJo SINE Alu -9 293 156 2245 94 0 3 chr17 2394467 2394765 -87109788 + AluSq SINE Alu 1 297 -16 1091 314 31 110 chr17 2394765 2394910 -87109643 - AluJo SINE Alu -146 156 1 1854 107 21 24 chr17 2395478 2395767 -87108786 + AluSx SINE Alu 2 289 -23 25 31 0 0 chr17 2395771 2395803 -87108750 + AT_rich Low_complexity Low_complexity 1 32 0 325 202 0 138 chr17 2395806 2395915 -87108638 + L1MC4 LINE L1 6615 6708 -1334 298 217 24 36 chr17 2395922 2396173 -87108380 + (TATATG)n Simple_repeat Simple_repeat 1 248 0 2324 87 3 0 chr17 2397181 2397493 -87107060 - AluSp SINE Alu 0 313 1 304 219 144 53 chr17 2397920 2398107 -87106446 - L1MC5 LINE L1 -182 7779 7576 23 0 0 0 chr17 2398132 2398155 -87106398 + AT_rich Low_complexity Low_complexity 1 23 0 1362 97 10 0 chr17 2398246 2398441 -87106112 - AluSp SINE Alu 0 313 117 249 368 34 8 chr17 2398639 2398681 -87105872 - L2 LINE L2 -237 3035 2996 1844 113 17 14 chr17 2398681 2398972 -87105581 + AluSx SINE Alu 1 292 -20 249 368 34 8 chr17 2398972 2399046 -87105507 - L2 LINE L2 -276 2996 2916 391 179 13 13 chr17 2399940 2400018 -87104535 + MIR SINE MIR 184 261 -1 430 340 32 6 chr17 2400227 2400383 -87104170 - MIR SINE MIR -75 187 28 1884 126 41 0 chr17 2400513 2400806 -87103747 - AluSq SINE Alu -8 305 1 2289 83 0 16 chr17 2400963 2401276 -87103277 - AluY SINE Alu -3 308 1 1909 128 3 13 chr17 2401321 2401627 -87102926 - AluSc SINE Alu -6 303 1 2030 135 3 6 chr17 2401627 2401938 -87102615 - AluSx SINE Alu -2 310 1 24 0 0 0 chr17 2402313 2402337 -87102216 + AT_rich Low_complexity Low_complexity 1 24 0 1870 142 3 7 chr17 2402337 2402632 -87101921 - AluJb SINE Alu -18 294 1 1507 139 4 8 chr17 2402648 2402885 -87101668 - MER46A DNA MER2_type 0 236 1 205 190 52 0 chr17 2402892 2402950 -87101603 + (TA)n Simple_repeat Simple_repeat 2 62 0 808 153 79 95 chr17 2403215 2403283 -87101270 + MER5A DNA MER1_type 1 69 -120 2097 100 3 0 chr17 2403283 2403573 -87100980 + AluSg SINE Alu 1 291 -19 808 153 79 95 chr17 2403573 2403694 -87100859 + MER5A DNA MER1_type 69 187 -2 512 141 41 50 chr17 2403714 2403835 -87100718 - L1MC3 LINE L1 -1 7784 7665 298 287 10 30 chr17 2404013 2404114 -87100439 - MIR SINE MIR -66 196 98 1851 152 3 10 chr17 2404151 2404460 -87100093 - AluJo SINE Alu -5 307 1 2219 96 3 0 chr17 2404604 2404916 -87099637 + AluSp SINE Alu 1 313 0 444 299 62 17 chr17 2404945 2405122 -87099431 - MIR SINE MIR -77 185 1 1586 244 99 46 chr17 2405158 2405653 -87098900 + MLT2F LTR ERVL 45 565 -98 1031 141 0 70 chr17 2405653 2405725 -87098828 - Tigger6 DNA MER2_type -3 1594 1519 2060 112 37 0 chr17 2405725 2406020 -87098533 - AluSg SINE Alu -4 306 1 2035 94 33 0 chr17 2406020 2406319 -87098234 - AluY SINE Alu -2 309 1 1031 141 0 70 chr17 2406319 2406430 -87098123 - Tigger6 DNA MER2_type -76 1521 1423 794 96 35 9 chr17 2406452 2406567 -87097986 - AluJb SINE Alu -194 118 1 816 189 9 108 chr17 2406743 2406896 -87097657 - L1M3 LINE L1 -541 5639 5472 755 208 0 0 chr17 2406896 2407026 -87097527 - FLAM_C SINE Alu -2 131 2 2064 125 0 3 chr17 2407032 2407336 -87097217 - AluSq SINE Alu -10 303 1 1939 141 0 13 chr17 2407337 2407682 -87096871 - AluSx SINE Alu 0 312 8 816 189 9 108 chr17 2407682 2407731 -87096822 - L1M3 LINE L1 -712 5468 5449 1622 173 3 14 chr17 2407966 2408261 -87096292 + AluJo SINE Alu 3 294 -18 536 264 8 8 chr17 2408273 2408402 -87096151 - L2 LINE L2 -3 3310 3182 1407 246 28 39 chr17 2408471 2408833 -87095720 + MLT1J LTR MaLR 3 360 -151 1306 193 30 43 chr17 2408842 2409143 -87095410 + AluJo SINE Alu 12 308 -4 199 109 0 43 chr17 2409155 2409201 -87095352 + (GAA)n Simple_repeat Simple_repeat 2 45 0 719 105 0 0 chr17 2409243 2409338 -87095215 - 7SLRNA srpRNA srpRNA -11 309 215 2309 90 6 0 chr17 2409338 2409649 -87094904 - AluSp SINE Alu 0 313 1 1614 111 4 0 chr17 2409649 2409874 -87094679 - 7SLRNA srpRNA srpRNA -93 227 1 266 253 0 13 chr17 2409879 2409954 -87094599 + MLT1J LTR MaLR 412 485 -26 229 268 237 0 chr17 2410014 2410111 -87094442 - L2 LINE L2 -223 3049 2930 977 90 0 8 chr17 2410216 2410350 -87094203 - AluSq/x SINE Alu -180 133 1 1551 173 3 26 chr17 2411142 2411278 -87093275 + AluJo SINE Alu 1 139 -173 2110 109 3 0 chr17 2411278 2411572 -87092981 + AluSg SINE Alu 1 295 -15 2377 59 3 13 chr17 2411574 2411881 -87092672 + AluY SINE Alu 1 304 -7 1551 173 3 26 chr17 2411881 2412048 -87092505 + AluJo SINE Alu 140 300 -12 2213 84 3 3 chr17 2412090 2412387 -87092166 + AluSq SINE Alu 1 297 -16 1426 176 97 38 chr17 2412664 2413004 -87091549 + LTR2B LTR ERV1 32 391 -99 867 45 0 0 chr17 2413022 2413132 -87091421 - SVA Other Other -1 1385 1276 563 136 2 0 chr17 2413134 2413228 -87091325 + LTR2B LTR ERV1 355 490 0 1073 151 0 0 chr17 2413229 2413395 -87091158 - AluSg/x SINE Alu -13 297 132 1520 93 9 0 chr17 2413395 2413609 -87090944 - AluSq SINE Alu -11 302 87 1003 167 0 22 chr17 2413712 2413892 -87090661 + AluSg/x SINE Alu 119 294 -16 1767 168 3 0 chr17 2413953 2414251 -87090302 - AluJb SINE Alu -13 299 1 338 287 103 51 chr17 2414251 2414582 -87089971 + HAL1 LINE L1 25 372 -2135 1933 123 0 16 chr17 2414585 2414894 -87089659 + AluSc SINE Alu 1 304 -5 430 284 83 33 chr17 2414895 2415213 -87089340 + L1MC/D LINE L1 5386 5714 -448 2073 79 7 4 chr17 2415344 2415658 -87088895 + AluSx SINE Alu 1 315 0 233 151 0 38 chr17 2415742 2415770 -87088783 + A-rich Low_complexity Low_complexity 5 32 -23 2296 86 3 3 chr17 2415770 2416083 -87088470 + AluSq SINE Alu 1 313 0 233 151 0 38 chr17 2416083 2416107 -87088446 + A-rich Low_complexity Low_complexity 32 55 0 415 327 35 39 chr17 2416328 2416582 -87087971 + L1M4 LINE L1 4582 4834 -1312 2075 124 0 6 chr17 2416627 2416941 -87087612 + AluSx SINE Alu 1 312 0 1257 102 0 0 chr17 2416941 2417108 -87087445 + AluSq SINE Alu 133 299 -14 974 174 11 16 chr17 2417231 2417421 -87087132 + AluJo SINE Alu 92 280 -32 614 325 13 21 chr17 2417441 2417675 -87086878 + MIR SINE MIR 31 262 0 612 215 23 8 chr17 2417859 2417989 -87086564 - AluSg/x SINE Alu -17 295 164 1263 113 5 5 chr17 2417991 2418177 -87086376 - AluSg/x SINE Alu -8 302 117 2018 119 10 10 chr17 2418293 2418595 -87085958 - AluSx SINE Alu -10 302 1 912 133 20 137 chr17 2418655 2418910 -87085643 + AluJb SINE Alu 87 311 -1 395 129 48 0 chr17 2419230 2419292 -87085261 - AluS SINE Alu -12 288 224 681 158 0 0 chr17 2419292 2419393 -87085160 - AluS SINE Alu -212 101 1 8118 127 143 38 chr17 2419442 2420997 -87083556 - pTR5 LTR ERV1 0 2438 589 999 94 0 0 chr17 2421127 2421254 -87083299 - FLAM_C SINE Alu -6 127 1 272 274 0 0 chr17 2421346 2421408 -87083145 - MIR3 SINE MIR -33 175 114 395 218 118 9 chr17 2421414 2421524 -87083029 - L1M4 LINE L1 -2553 3593 3472 1195 131 4 79 chr17 2421668 2421897 -87082656 + AluSx SINE Alu 1 212 -100 1007 104 0 146 chr17 2421997 2422209 -87082344 + AluJb SINE Alu 125 305 -7 517 348 146 29 chr17 2422218 2422904 -87081649 - L2 LINE L2 -727 2587 1822 1640 152 14 18 chr17 2422904 2423219 -87081334 + AluJo SINE Alu 1 314 0 1529 177 29 35 chr17 2423276 2423457 -87081096 + L1MB2 LINE L1 5651 5832 -339 2167 81 0 37 chr17 2423457 2423780 -87080773 + AluSx SINE Alu 1 311 -1 1529 177 29 35 chr17 2423780 2424025 -87080528 + L1MB2 LINE L1 5832 6171 0 622 164 95 0 chr17 2424297 2424413 -87080140 - FLAM_C SINE Alu 0 143 17 1200 103 0 0 chr17 2424555 2424720 -87079833 + AluSq SINE Alu 1 165 -148 1413 77 31 15 chr17 2424736 2424932 -87079621 + AluSg/x SINE Alu 101 299 -13 377 260 46 51 chr17 2425042 2425238 -87079315 + L1MC4a LINE L1 5711 5905 -1903 2381 66 0 0 chr17 2426776 2427079 -87077474 + AluY SINE Alu 1 303 -8 22 0 0 0 chr17 2427083 2427105 -87077448 + AT_rich Low_complexity Low_complexity 1 22 0 2401 42 0 0 chr17 2427112 2427418 -87077135 + AluY SINE Alu 1 306 0 263 273 68 45 chr17 2427682 2427792 -87076761 - MIR SINE MIR -78 184 69 2145 94 0 25 chr17 2427792 2428110 -87076443 + AluSg SINE Alu 1 310 0 263 273 68 45 chr17 2428110 2428131 -87076422 - MIR SINE MIR -193 69 50 2322 72 7 0 chr17 2428403 2428707 -87075846 + AluY SINE Alu 1 306 -5 1898 155 0 0 chr17 2428727 2429023 -87075530 + AluSq SINE Alu 1 296 -17 5332 142 25 66 chr17 2429023 2430066 -87074487 + L1MC1 LINE L1 5324 6323 -10 512 133 0 0 chr17 2430077 2430160 -87074393 + L1M4b LINE L1 90 172 -6687 189 107 0 0 chr17 2430160 2430188 -87074365 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 1076 141 0 6 chr17 2430648 2430818 -87073735 - AluJb SINE Alu -27 285 117 240 86 0 0 chr17 2431268 2431303 -87073250 + (A)n Simple_repeat Simple_repeat 1 35 0 1924 89 23 0 chr17 2431539 2431798 -87072755 + AluSq SINE Alu 1 265 -48 207 0 0 0 chr17 2431803 2431826 -87072727 + (TC)n Simple_repeat Simple_repeat 2 24 0 808 291 160 38 chr17 2432851 2433490 -87071063 - L2 LINE L2 -667 2647 1931 2192 107 0 0 chr17 2433569 2433867 -87070686 + AluSq SINE Alu 1 298 -15 815 112 72 0 chr17 2433956 2434081 -87070472 + AluJo SINE Alu 2 135 -177 21 0 0 0 chr17 2434081 2434102 -87070451 + AT_rich Low_complexity Low_complexity 1 21 0 1194 166 67 9 chr17 2434239 2434462 -87070091 - MER46A DNA MER2_type 0 236 1 543 319 87 0 chr17 2435007 2435222 -87069331 + MIR SINE MIR 24 262 0 2454 188 75 30 chr17 2435371 2435945 -87068608 - L1MB7 LINE L1 0 6184 5585 1282 189 23 36 chr17 2436040 2436366 -87068187 - AluJb SINE Alu 0 312 1 445 269 65 9 chr17 2436689 2436797 -87067756 + MIR SINE MIR 34 147 -61 2254 103 3 0 chr17 2436800 2437111 -87067442 + AluSx SINE Alu 1 312 0 1865 214 156 63 chr17 2437367 2437816 -87066737 + L1MC4 LINE L1 6725 7255 -787 1673 171 0 28 chr17 2437816 2438137 -87066416 + AluSx SINE Alu 1 312 0 1865 214 156 63 chr17 2438137 2438342 -87066211 + L1MC4 LINE L1 7255 7440 -602 437 187 122 0 chr17 2438391 2438498 -87066055 + L1MB7 LINE L1 6049 6168 -16 1036 277 125 49 chr17 2438531 2439079 -87065474 + HAL1b LINE L1 94 714 -634 886 163 141 0 chr17 2439079 2439263 -87065290 - MER6B DNA MER2_type 0 210 1 1036 277 125 49 chr17 2439263 2439450 -87065103 + HAL1b LINE L1 714 885 -463 1647 141 21 34 chr17 2439520 2439811 -87064742 + AluJo SINE Alu 1 287 -25 21 0 0 0 chr17 2439811 2439832 -87064721 + AT_rich Low_complexity Low_complexity 1 21 0 368 252 121 89 chr17 2439833 2440174 -87064379 + L1M4 LINE L1 2137 3422 -2724 234 257 68 14 chr17 2441268 2441342 -87063211 - MER5C DNA MER1_type -245 79 2 2013 125 3 0 chr17 2441391 2441687 -87062866 - AluSq SINE Alu -14 299 3 277 303 8 53 chr17 2441696 2441828 -87062725 - Charlie8 DNA MER1_type -2203 214 89 3070 140 39 14 chr17 2441881 2442395 -87062158 + MER1A DNA MER1_type 1 527 0 790 303 69 69 chr17 2442563 2443072 -87061481 - L2 LINE L2 -1 3312 2804 336 205 24 36 chr17 2443083 2443166 -87061387 + MER94 DNA DNA 1 82 -52 1133 114 0 0 chr17 2443172 2443330 -87061223 - AluSg/x SINE Alu -17 293 136 378 183 16 0 chr17 2443435 2443520 -87061033 - L1P3 LINE L1 -402 5752 5664 442 188 20 2 chr17 2443536 2443787 -87060766 + AluJo SINE Alu 1 295 -17 636 250 152 62 chr17 2444034 2444190 -87060363 + Charlie8 DNA MER1_type 63 204 -2213 691 179 0 15 chr17 2444190 2444324 -87060229 - FLAM_C SINE Alu 0 133 2 636 250 152 62 chr17 2444324 2444535 -87060018 + Charlie8 DNA MER1_type 204 463 -1954 2312 55 3 0 chr17 2444535 2444825 -87059728 - AluSg SINE Alu -19 291 1 1743 161 3 0 chr17 2444854 2445139 -87059414 - AluSx SINE Alu -26 286 1 1243 88 83 6 chr17 2445545 2445726 -87058827 + MER30 DNA MER1_type 1 195 -35 2274 99 0 16 chr17 2446203 2446516 -87058037 + AluSg SINE Alu 1 308 -2 2077 94 17 14 chr17 2447226 2447523 -87057030 - AluSx SINE Alu -14 298 1 193 263 0 0 chr17 2447525 2447563 -87056990 - MIR SINE MIR -78 184 147 318 219 113 86 chr17 2447598 2447636 -87056917 + MER58B DNA MER1_type 4 40 -301 1495 159 21 10 chr17 2447636 2447925 -87056628 - AluJb SINE Alu -20 292 1 318 219 113 86 chr17 2447925 2448037 -87056516 + MER58B DNA MER1_type 40 158 -183 28 29 0 0 chr17 2448041 2448076 -87056477 + AT_rich Low_complexity Low_complexity 1 35 0 298 85 85 0 chr17 2448078 2448125 -87056428 + MER58B DNA MER1_type 150 200 -141 180 0 0 0 chr17 2448165 2448185 -87056368 + (TTTTTG)n Simple_repeat Simple_repeat 4 23 0 21 36 0 0 chr17 2449006 2449034 -87055519 + AT_rich Low_complexity Low_complexity 1 28 0 1620 143 24 14 chr17 2449037 2449324 -87055229 - AluJo SINE Alu -9 303 14 525 173 136 0 chr17 2449345 2449455 -87055098 + MER58B DNA MER1_type 217 341 0 1222 192 4 54 chr17 2449621 2449881 -87054672 - AluJo SINE Alu -43 269 23 1739 115 64 3 chr17 2450006 2450302 -87054251 - MER2 DNA MER2_type 0 345 32 2155 103 0 0 chr17 2450454 2450754 -87053799 - AluSg SINE Alu -10 300 1 2166 154 26 48 chr17 2451320 2451735 -87052818 - MLT2D LTR ERVL -8 406 1 2305 53 0 33 chr17 2451797 2452097 -87052456 + AluY SINE Alu 1 290 -21 1830 120 0 37 chr17 2452651 2452950 -87051603 + AluSx SINE Alu 1 288 -24 2078 97 0 7 chr17 2452982 2453271 -87051282 + AluSg SINE Alu 1 287 -23 608 205 6 58 chr17 2453617 2453773 -87050780 - AluJo SINE Alu -63 249 102 871 145 47 47 chr17 2453773 2453945 -87050608 - AluJb SINE Alu -140 172 1 1020 222 4 50 chr17 2454204 2454465 -87050088 - AluJo SINE Alu -21 291 43 2105 103 0 7 chr17 2454998 2455288 -87049265 + AluSc SINE Alu 1 288 -21 1498 131 20 3 chr17 2455548 2455802 -87048751 - L1PA13 LINE L1 -14 6149 5845 1209 137 15 5 chr17 2456030 2456234 -87048319 - AluJb SINE Alu 0 312 107 1695 92 9 0 chr17 2456237 2456466 -87048087 - THE1A LTR MaLR 0 355 125 2192 108 3 11 chr17 2456466 2456817 -87047736 + L1PBa LINE L1 2413 2760 -4103 560 178 0 0 chr17 2456919 2457020 -87047533 + AluSg/x SINE Alu 204 304 -8 2262 85 3 13 chr17 2457286 2457593 -87046960 + AluSx SINE Alu 1 304 -8 1593 169 3 3 chr17 2458335 2458625 -87045928 - AluJb SINE Alu -22 290 1 1314 189 13 60 chr17 2458627 2458786 -87045767 - AluJo SINE Alu -14 288 148 1987 125 7 7 chr17 2458786 2459091 -87045462 - AluSx SINE Alu -7 305 1 1314 189 13 60 chr17 2459091 2459232 -87045321 - AluJo SINE Alu -154 148 2 544 126 0 172 chr17 2459244 2459395 -87045158 - FLAM_C SINE Alu -7 126 2 374 247 96 48 chr17 2459483 2459649 -87044904 - MIR SINE MIR -48 214 41 2355 70 0 6 chr17 2459878 2460191 -87044362 + AluY SINE Alu 1 311 0 1394 57 0 0 chr17 2460191 2460367 -87044186 + AluSg/x SINE Alu 132 307 -2 23 33 0 0 chr17 2461029 2461059 -87043494 + GC_rich Low_complexity Low_complexity 1 30 0 252 0 0 0 chr17 2461120 2461148 -87043405 + (CGG)n Simple_repeat Simple_repeat 2 29 0 285 102 51 0 chr17 2461417 2461476 -87043077 + CT-rich Low_complexity Low_complexity 1 62 0 237 200 31 15 chr17 2461635 2461700 -87042853 + CT-rich Low_complexity Low_complexity 2 67 0 2518 170 62 18 chr17 2463651 2464127 -87040426 + L1MB2 LINE L1 5628 6130 -41 2226 131 129 8 chr17 2464127 2464508 -87040045 + MSTA LTR MaLR 2 428 0 2518 170 62 18 chr17 2464508 2464544 -87040009 + L1MB2 LINE L1 6130 6163 -8 277 192 0 0 chr17 2465134 2465186 -87039367 - Alu SINE Alu -2 300 249 480 316 163 37 chr17 2465188 2465678 -87038875 + L2 LINE L2 2736 3270 -2 710 203 16 0 chr17 2465733 2465861 -87038692 - FLAM_A SINE Alu 0 133 4 22 0 0 0 chr17 2466050 2466072 -87038481 + AT_rich Low_complexity Low_complexity 1 22 0 1626 155 4 4 chr17 2466154 2466418 -87038135 - AluSx SINE Alu -14 298 35 2240 92 0 16 chr17 2466665 2466980 -87037573 - AluSx SINE Alu -2 310 1 2088 114 19 0 chr17 2467234 2467541 -87037012 + AluSq SINE Alu 1 313 0 1267 216 36 16 chr17 2467551 2467856 -87036697 + AluJo SINE Alu 1 311 -1 2262 95 0 0 chr17 2467976 2468272 -87036281 + AluSg SINE Alu 1 296 -14 486 307 7 7 chr17 2468396 2468533 -87036020 - MIR3 SINE MIR -25 183 47 1997 86 3 58 chr17 2468787 2469100 -87035453 + AluSq SINE Alu 1 296 -17 2297 163 38 57 chr17 2469179 2469702 -87034851 + L1MB4 LINE L1 5343 5855 -325 334 251 110 64 chr17 2469710 2469929 -87034624 + L1MB7 LINE L1 5642 5870 -314 * 353 231 132 52 chr17 2469917 2470144 -87034409 + L1MB7 LINE L1 5658 5867 -317 225 143 54 18 chr17 2470148 2470204 -87034349 + L1M4 LINE L1 5745 5802 -382 5414 72 24 15 chr17 2470317 2471114 -87033439 + SVA Other Other 65 868 -518 6453 65 13 41 chr17 2471158 2472134 -87032419 + SVA Other Other 433 1381 -5 781 311 138 26 chr17 2472297 2472956 -87031597 + L2 LINE L2 2243 2975 -339 1374 126 36 138 chr17 2473435 2473603 -87030950 + AluJo SINE Alu 3 122 -180 1914 103 3 72 chr17 2473603 2473923 -87030630 + AluSx SINE Alu 1 298 -14 1374 126 36 138 chr17 2473923 2474088 -87030465 + AluJo SINE Alu 122 302 0 966 151 37 55 chr17 2474143 2474361 -87030192 - L1MA4A LINE L1 -4 6299 6086 1000 199 23 14 chr17 2474657 2474873 -87029680 - AluJo SINE Alu -8 304 87 570 253 112 0 chr17 2474876 2475054 -87029499 + L2 LINE L2 3111 3308 -5 2457 54 0 0 chr17 2476312 2476610 -87027943 + AluSx SINE Alu 1 298 -14 694 240 147 62 chr17 2476765 2477002 -87027551 - MLT1H LTR MaLR -16 533 318 2029 88 13 42 chr17 2477002 2477309 -87027244 - AluSq SINE Alu -15 298 1 694 240 147 62 chr17 2477309 2477501 -87027052 - MLT1H LTR MaLR -231 318 30 623 284 72 32 chr17 2477722 2477960 -87026593 + MIR SINE MIR 18 261 -1 26 0 0 0 chr17 2478018 2478044 -87026509 + AT_rich Low_complexity Low_complexity 1 26 0 2026 97 0 7 chr17 2478182 2478489 -87026064 + AluSx SINE Alu 22 312 0 1982 126 10 3 chr17 2479167 2479468 -87025085 + AluSq SINE Alu 4 306 -7 584 174 0 37 chr17 2479561 2479670 -87024883 - AluJb SINE Alu -6 306 202 * 686 126 0 0 chr17 2479669 2479772 -87024781 + AluSg/x SINE Alu 196 298 -11 891 164 0 31 chr17 2480165 2480324 -87024229 + AluJo SINE Alu 1 154 -158 423 133 0 0 chr17 2480330 2480390 -87024163 + AluJb SINE Alu 95 154 -158 1436 142 0 0 chr17 2480396 2480608 -87023945 + AluJb SINE Alu 95 306 -6 209 179 0 90 chr17 2480923 2480990 -87023563 + A-rich Low_complexity Low_complexity 1 61 0 301 211 146 89 chr17 2481187 2481310 -87023243 - MLT1I LTR MaLR -232 177 48 524 115 35 35 chr17 2481418 2481505 -87023048 + L1M3 LINE L1 5583 5669 -514 1009 122 6 6 chr17 2481509 2481665 -87022888 - AluSq SINE Alu -157 156 1 1511 90 10 0 chr17 2482108 2482309 -87022244 - THE1A LTR MaLR -152 203 1 11444 91 10 24 chr17 2482309 2483394 -87021159 - THE1A-int LTR MaLR 0 1580 481 2113 103 37 0 chr17 2483394 2483694 -87020859 - AluY SINE Alu 0 311 1 11444 91 10 24 chr17 2483694 2483767 -87020786 - THE1A-int LTR MaLR -1099 481 408 1849 108 3 42 chr17 2483767 2484074 -87020479 - AluSx SINE Alu -15 297 3 11444 91 10 24 chr17 2484074 2484517 -87020036 - THE1A-int LTR MaLR -1172 408 1 2505 114 14 0 chr17 2484517 2484867 -87019686 - THE1A LTR MaLR 0 355 1 666 185 0 0 chr17 2484870 2484978 -87019575 - FLAM_C SINE Alu -34 109 2 23 54 0 0 chr17 2485138 2485175 -87019378 + AT_rich Low_complexity Low_complexity 1 37 0 1771 140 3 57 chr17 2485780 2486095 -87018458 + AluJo SINE Alu 1 298 -14 2247 101 7 10 chr17 2486105 2486402 -87018151 + AluSx SINE Alu 1 296 -16 2078 100 0 4 chr17 2486706 2486985 -87017568 - AluSg SINE Alu -30 280 3 15429 206 17 13 chr17 2486987 2490990 -87013563 - L1PA12 LINE L1 -752 6832 2822 253 283 65 0 chr17 2490998 2491090 -87013463 + L1ME LINE L1 5727 5824 -297 2301 106 3 6 chr17 2491094 2491406 -87013147 + AluSx SINE Alu 1 311 -1 1033 292 148 7 chr17 2491409 2491998 -87012555 - L1PA12 LINE L1 -6186 1399 728 447 223 133 30 chr17 2492037 2492203 -87012350 - L1MC5 LINE L1 -37 7924 7742 829 175 0 0 chr17 2492220 2492363 -87012190 - FLAM_C SINE Alu 0 143 1 988 208 83 39 chr17 2492363 2492700 -87011853 - L1MC5 LINE L1 -232 7729 7378 1734 167 63 0 chr17 2492701 2493018 -87011535 - MER2 DNA MER2_type 0 345 9 490 134 107 9 chr17 2493027 2493139 -87011414 - L1MC5 LINE L1 -583 7378 7256 2123 127 13 0 chr17 2493295 2493602 -87010951 - AluSq SINE Alu -2 311 1 445 347 115 0 chr17 2493721 2494009 -87010544 + L2 LINE L2 1780 2100 -1214 189 0 0 0 chr17 2494096 2494117 -87010436 + (T)n Simple_repeat Simple_repeat 1 21 0 226 337 111 46 chr17 2494165 2494268 -87010285 + L2 LINE L2 2313 2408 -906 2232 99 3 7 chr17 2494268 2494570 -87009983 - AluSx SINE Alu -11 301 1 226 337 111 46 chr17 2494570 2494772 -87009781 + L2 LINE L2 2408 2638 -676 217 329 21 100 chr17 2494973 2495015 -87009538 + L2 LINE L2 3144 3188 -84 2149 106 17 0 chr17 2495015 2495308 -87009245 + AluSq SINE Alu 1 298 -15 217 329 21 100 chr17 2495308 2495405 -87009148 + L2 LINE L2 3188 3272 0 1799 137 13 27 chr17 2495489 2495789 -87008764 - AluJo SINE Alu -6 306 11 1314 173 57 83 chr17 2495952 2496252 -87008301 + AluJb SINE Alu 1 292 -20 650 154 27 9 chr17 2496584 2496694 -87007859 - AluSx SINE Alu -10 300 189 961 145 0 0 chr17 2496694 2496832 -87007721 - AluSx SINE Alu -174 138 1 1398 194 44 34 chr17 2496865 2497158 -87007395 - AluJo SINE Alu -16 296 1 284 253 0 67 chr17 2497177 2497252 -87007301 + L2 LINE L2 3185 3254 -18 1336 181 58 11 chr17 2497465 2497725 -87006828 + AluJo SINE Alu 28 299 -13 2211 106 0 7 chr17 2498639 2498940 -87005613 - AluSq SINE Alu -14 299 1 2412 74 3 0 chr17 2499033 2499330 -87005223 - AluY SINE Alu -13 298 1 2134 96 0 4 chr17 2499733 2500013 -87004540 - AluSg SINE Alu -16 294 16 22 35 0 0 chr17 2500020 2500049 -87004504 + AT_rich Low_complexity Low_complexity 1 29 0 3383 255 72 50 chr17 2500054 2500584 -87003969 - L1MD3 LINE L1 0 8042 7525 1909 124 0 4 chr17 2500584 2500850 -87003703 - AluSg SINE Alu -13 297 33 3383 255 72 50 chr17 2500850 2501267 -87003286 - L1MD3 LINE L1 -517 7525 7119 2293 96 0 34 chr17 2501267 2501590 -87002963 - AluSx SINE Alu 0 312 1 3383 255 72 50 chr17 2501590 2502009 -87002544 - L1MD3 LINE L1 -923 7119 6659 641 187 193 0 chr17 2502014 2502164 -87002389 - MER20 DNA MER1_type -5 214 36 581 297 112 29 chr17 2502206 2502372 -87002181 - L1MC4a LINE L1 -1208 6600 6449 1647 154 37 85 chr17 2502372 2502749 -87001804 + MER46B DNA MER2_type 2 235 -1 581 297 112 29 chr17 2502749 2503210 -87001343 - L1MC4a LINE L1 -1359 6449 5901 1654 127 0 95 chr17 2503212 2503550 -87001003 - AluJo SINE Alu -6 306 1 770 169 73 15 chr17 2503550 2503686 -87000867 - AluJo SINE Alu -167 145 2 2016 125 3 23 chr17 2503686 2503991 -87000562 - AluSx SINE Alu -13 299 1 1225 171 76 36 chr17 2504034 2504285 -87000268 - AluJo SINE Alu -46 266 6 520 245 12 105 chr17 2504301 2504391 -87000162 - L1MC4a LINE L1 -1926 5882 5785 2192 121 0 3 chr17 2504391 2504698 -86999855 + AluSq SINE Alu 1 306 -7 520 245 12 105 chr17 2504698 2504864 -86999689 - L1MC4a LINE L1 -2023 5785 5650 1826 169 10 0 chr17 2505096 2505392 -86999161 + AluJb SINE Alu 1 299 -13 2094 100 18 0 chr17 2505447 2505728 -86998825 + AluSx SINE Alu 1 286 -26 219 36 0 0 chr17 2505728 2505756 -86998797 + (TA)n Simple_repeat Simple_repeat 2 29 0 2106 90 32 0 chr17 2505756 2506035 -86998518 - AluY SINE Alu -23 288 1 377 307 135 63 chr17 2506043 2506551 -86998002 + L1M4 LINE L1 2870 3340 -2806 1741 115 28 4 chr17 2506551 2506803 -86997750 + AluSx SINE Alu 51 308 -4 377 307 135 63 chr17 2506803 2507081 -86997472 + L1M4 LINE L1 3340 3596 -2550 1635 163 56 24 chr17 2507081 2507199 -86997354 + AluSg SINE Alu 1 114 -196 2035 107 6 50 chr17 2507199 2507516 -86997037 + AluSx SINE Alu 1 303 -9 1635 163 56 24 chr17 2507516 2507685 -86996868 + AluSg SINE Alu 114 297 -13 377 307 135 63 chr17 2507685 2507783 -86996770 + L1M4 LINE L1 3596 3685 -2461 2453 102 26 50 chr17 2507783 2507854 -86996699 - THE1C LTR MaLR 0 375 304 2224 82 7 0 chr17 2507854 2508161 -86996392 + AluY SINE Alu 1 309 0 2453 102 26 50 chr17 2508161 2508472 -86996081 - THE1C LTR MaLR -71 304 1 377 307 135 63 chr17 2508472 2508526 -86996027 + L1M4 LINE L1 3685 3734 -2412 2059 137 0 3 chr17 2508526 2508825 -86995728 + AluSx SINE Alu 1 298 -14 377 307 135 63 chr17 2508825 2509142 -86995411 + L1M4 LINE L1 3734 4219 -1927 910 138 13 38 chr17 2509205 2509364 -86995189 + AluSg/x SINE Alu 144 298 -12 2053 123 7 10 chr17 2509422 2509724 -86994829 + AluSx SINE Alu 1 301 -11 271 262 60 27 chr17 2509751 2509900 -86994653 + L1M4 LINE L1 4505 4658 -1488 24 0 0 0 chr17 2509903 2509927 -86994626 + AT_rich Low_complexity Low_complexity 1 24 0 232 189 19 0 chr17 2510159 2510212 -86994341 + L1M4 LINE L1 5115 5168 -978 991 165 215 58 chr17 2510234 2510361 -86994192 + AluJb SINE Alu 1 107 -195 2262 111 0 0 chr17 2510361 2510658 -86993895 + AluSx SINE Alu 1 297 -15 991 165 215 58 chr17 2510658 2510791 -86993762 + AluJb SINE Alu 107 302 0 1999 132 0 26 chr17 2511426 2511736 -86992817 + AluSx SINE Alu 1 302 -10 1915 168 93 26 chr17 2511875 2512261 -86992292 - L1MC2 LINE L1 -71 6273 5855 2484 51 3 16 chr17 2512261 2512572 -86991981 + AluY SINE Alu 1 307 -4 1915 168 93 26 chr17 2512572 2512603 -86991950 - L1MC2 LINE L1 -489 5855 5828 5885 46 3 5 chr17 2512888 2513562 -86990991 + L1PA5 LINE L1 5481 6153 -1 2149 107 3 28 chr17 2513919 2514238 -86990315 - AluY SINE Alu 0 311 1 1868 130 60 0 chr17 2514322 2514606 -86989947 - AluSq SINE Alu -12 301 1 1825 174 0 0 chr17 2514775 2515073 -86989480 - AluJb SINE Alu -14 298 1 760 165 126 77 chr17 2515073 2515255 -86989298 - AluJo SINE Alu -3 309 119 297 0 0 0 chr17 2515315 2515348 -86989205 + (TG)n Simple_repeat Simple_repeat 2 34 0 1408 171 121 11 chr17 2515523 2515787 -86988766 + AluSg SINE Alu 1 293 -17 517 200 0 0 chr17 2515810 2515905 -86988648 + U13 snRNA snRNA 1 95 -9 2267 95 3 10 chr17 2516049 2516355 -86988198 - AluSg SINE Alu -6 304 1 1175 168 25 15 chr17 2516383 2516580 -86987973 + AluJo SINE Alu 83 281 -31 861 96 0 0 chr17 2517061 2517176 -86987377 - AluY SINE Alu -20 291 177 2036 127 3 7 chr17 2517376 2517675 -86986878 - AluSx SINE Alu -14 298 1 1976 133 28 0 chr17 2519103 2519388 -86985165 + AluSx SINE Alu 1 293 -19 2082 102 56 0 chr17 2519388 2519673 -86984880 + AluSc SINE Alu 1 301 -8 1953 126 14 20 chr17 2519682 2519975 -86984578 + AluSx SINE Alu 1 291 -21 6482 90 60 6 chr17 2520362 2521776 -86982777 - L1PA8 LINE L1 0 6172 4675 1552 103 210 4 chr17 2521945 2522197 -86982356 + AluY SINE Alu 1 304 -7 2071 121 0 37 chr17 2522469 2522510 -86982043 - AluSx SINE Alu -2 310 269 414 0 0 0 chr17 2522510 2522556 -86981997 + (TG)n Simple_repeat Simple_repeat 1 46 0 2071 121 0 37 chr17 2522556 2522836 -86981717 - AluSx SINE Alu -43 269 1 2212 106 3 10 chr17 2522960 2523261 -86981292 + AluSp SINE Alu 1 299 -14 1019 109 0 0 chr17 2523262 2523400 -86981153 + AluY SINE Alu 135 272 -39 824 211 0 0 chr17 2523507 2523673 -86980880 - AluJb SINE Alu 0 312 147 2193 110 10 0 chr17 2523833 2524124 -86980429 - AluSg SINE Alu -16 294 1 668 88 0 0 chr17 2524125 2524205 -86980348 - AluSg1 SINE Alu -223 86 7 1103 141 0 0 chr17 2524375 2524538 -86980015 - AluSp SINE Alu -14 299 137 1817 93 4 0 chr17 2524539 2524775 -86979778 - AluSg SINE Alu -14 296 60 312 27 0 0 chr17 2524797 2524834 -86979719 + (TC)n Simple_repeat Simple_repeat 1 37 0 313 208 0 0 chr17 2524842 2524895 -86979658 + Tigger4(Zombi) DNA MER2_type 2679 2731 0 2395 91 7 7 chr17 2525722 2526031 -86978522 - AluSx SINE Alu -3 309 1 381 231 20 121 chr17 2526541 2526740 -86977813 + MIR SINE MIR 84 262 0 974 67 0 0 chr17 2527357 2527476 -86977077 + AluY SINE Alu 174 292 -19 2054 99 14 3 chr17 2528174 2528458 -86976095 + AluSx SINE Alu 1 287 -25 1864 147 31 0 chr17 2528536 2528822 -86975731 + AluJo SINE Alu 1 295 -17 2267 58 0 7 chr17 2528825 2529100 -86975453 + AluY SINE Alu 1 273 -38 258 286 64 64 chr17 2529205 2529376 -86975177 + L1ME LINE L1 5552 5722 -399 2110 92 27 7 chr17 2529397 2529690 -86974863 - AluSq SINE Alu -14 299 1 248 217 0 36 chr17 2529878 2529961 -86974592 + CT-rich Low_complexity Low_complexity 4 83 0 495 276 173 5 chr17 2530949 2531134 -86973419 + MIR SINE MIR 31 246 -16 2240 83 13 17 chr17 2531323 2531623 -86972930 - AluSg SINE Alu 0 310 12 2221 128 0 0 chr17 2531728 2532034 -86972519 - AluSx SINE Alu -6 306 1 1768 165 0 49 chr17 2532117 2532444 -86972109 + AluJo SINE Alu 1 311 -1 2283 102 7 0 chr17 2532919 2533214 -86971339 + AluSq SINE Alu 1 297 -16 2676 27 0 0 chr17 2533489 2533788 -86970765 + AluY SINE Alu 1 299 -12 22 0 0 0 chr17 2534808 2534830 -86969723 + AT_rich Low_complexity Low_complexity 1 22 0 681 208 0 17 chr17 2534994 2535114 -86969439 + FLAM_A SINE Alu 5 122 -11 1973 136 10 7 chr17 2535139 2535434 -86969119 - AluSx SINE Alu -16 296 1 827 83 101 0 chr17 2535656 2535765 -86968788 + AluJo SINE Alu 6 125 -187 1112 152 0 17 chr17 2535806 2535984 -86968569 + AluJo SINE Alu 120 294 -18 2172 106 0 28 chr17 2536223 2536543 -86968010 + AluSx SINE Alu 1 311 -1 2307 54 34 3 chr17 2537012 2537306 -86967247 + AluY SINE Alu 1 303 -8 2330 71 0 0 chr17 2537704 2538023 -86966530 + AluY SINE Alu 1 311 0 2142 118 0 31 chr17 2538106 2538251 -86966302 + AluSx SINE Alu 1 149 -163 2231 90 10 3 chr17 2538251 2538551 -86966002 + AluSp SINE Alu 1 302 -11 2142 118 0 31 chr17 2538551 2538727 -86965826 + AluSx SINE Alu 149 312 0 1624 163 41 34 chr17 2538737 2539031 -86965522 + AluJo SINE Alu 1 296 -16 696 251 6 0 chr17 2539042 2539213 -86965340 + MER3 DNA MER1_type 38 209 0 1146 112 0 0 chr17 2539457 2539803 -86964750 + (TGGA)n Simple_repeat Simple_repeat 1 346 0 519 288 123 27 chr17 2539812 2540219 -86964334 - L1MC4 LINE L1 -48 7994 7549 252 299 126 0 chr17 2540960 2541047 -86963506 + MIR SINE MIR 153 250 -12 2078 131 3 0 chr17 2541087 2541384 -86963169 + 7SLRNA srpRNA srpRNA 18 315 -5 1102 133 20 64 chr17 2541617 2541820 -86962733 - AluJb SINE Alu -32 280 87 186 43 0 0 chr17 2543692 2543715 -86960838 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 261 0 0 0 chr17 2545754 2545783 -86958770 + (T)n Simple_repeat Simple_repeat 1 29 0 926 98 0 8 chr17 2546132 2546265 -86958288 + FLAM_C SINE Alu 2 133 0 1916 143 10 10 chr17 2546580 2546888 -86957665 + AluSq SINE Alu 1 308 -5 346 266 148 30 chr17 2547215 2547384 -86957169 + MER5A DNA MER1_type 1 189 0 2245 103 0 0 chr17 2547483 2547784 -86956769 - AluSg SINE Alu -9 301 1 2017 104 0 11 chr17 2548106 2548385 -86956168 - AluSq SINE Alu -37 276 1 2009 101 3 0 chr17 2551413 2551700 -86952853 + AluSg SINE Alu 1 288 -22 304 30 60 30 chr17 2552062 2552129 -86952424 + (CCCCCG)n Simple_repeat Simple_repeat 5 73 0 1633 130 0 0 chr17 2553298 2553551 -86951002 + AluSx SINE Alu 54 306 0 183 209 47 0 chr17 2556120 2556163 -86948390 + MIR SINE MIR 103 147 -115 2327 74 7 3 chr17 2557249 2557548 -86947005 + AluSp SINE Alu 1 300 -13 185 171 29 0 chr17 2558841 2558876 -86945677 + MIR SINE MIR 112 147 -61 2076 123 0 10 chr17 2558893 2559202 -86945351 + AluSx SINE Alu 1 306 -6 1789 147 0 14 chr17 2559466 2559759 -86944794 - AluJb SINE Alu -23 289 1 2246 104 0 0 chr17 2559763 2560061 -86944492 - AluSg SINE Alu -12 298 1 2328 88 0 3 chr17 2562949 2563257 -86941296 - AluSq SINE Alu -6 307 1 344 312 33 45 chr17 2564075 2564251 -86940302 - MIR3 SINE MIR 0 208 35 245 260 146 32 chr17 2564317 2564440 -86940113 + MIR SINE MIR 47 184 -24 187 291 157 22 chr17 2566435 2566569 -86937984 - MIR3 SINE MIR -34 174 23 236 219 31 31 chr17 2568620 2568684 -86935869 - MIR SINE MIR -118 144 81 306 186 4 35 chr17 2570255 2570339 -86934214 + MIR SINE MIR 49 126 -82 214 158 42 63 chr17 2571633 2571728 -86932825 + (CCCG)n Simple_repeat Simple_repeat 4 96 0 225 226 312 0 chr17 2572485 2572571 -86931982 - MIR SINE MIR -49 159 49 1631 106 21 100 chr17 2572975 2573304 -86931249 + AluJo SINE Alu 1 303 -9 2338 67 7 0 chr17 2573304 2573601 -86930952 + AluSq SINE Alu 1 300 -13 358 246 40 43 chr17 2573632 2573799 -86930754 + L1MC4 LINE L1 1959 6985 -1337 260 254 103 11 chr17 2573823 2574004 -86930549 - L1MC4a LINE L1 -507 5826 5729 2016 135 26 0 chr17 2574178 2574481 -86930072 + AluJb SINE Alu 1 311 -1 2087 103 3 0 chr17 2574605 2574895 -86929658 - AluSx SINE Alu -21 291 1 484 286 0 0 chr17 2574972 2575098 -86929455 + MER94 DNA DNA 1 126 -8 2299 93 3 0 chr17 2575135 2575437 -86929116 - AluSg SINE Alu -7 303 1 195 411 56 0 chr17 2575440 2575530 -86929023 + L2 LINE L2 3155 3249 -23 960 195 0 0 chr17 2575535 2575704 -86928849 - FRAM SINE Alu -4 172 4 1723 75 6 177 chr17 2575830 2576197 -86928356 - AluSp SINE Alu 0 308 1 2152 110 7 0 chr17 2576482 2576790 -86927763 + AluSx SINE Alu 1 310 -2 335 194 10 126 chr17 2577245 2577313 -86927240 + MIR3 SINE MIR 112 186 -22 1784 124 10 59 chr17 2577313 2577619 -86926934 + AluSx SINE Alu 1 291 -21 2328 71 7 0 chr17 2577620 2577915 -86926638 + AluY SINE Alu 1 297 -14 335 194 10 126 chr17 2577915 2577947 -86926606 + MIR3 SINE MIR 185 202 -6 2120 136 0 0 chr17 2578042 2578350 -86926203 - AluSx SINE Alu -4 308 1 241 195 0 0 chr17 2578619 2578660 -86925893 + Alu SINE Alu 240 280 -22 636 171 0 18 chr17 2578714 2578825 -86925728 + FLAM_A SINE Alu 20 128 -14 2035 122 30 0 chr17 2578826 2579130 -86925423 + AluSp SINE Alu 1 313 0 516 210 129 47 chr17 2579155 2579267 -86925286 - MLT1K LTR MaLR -66 522 421 2191 107 0 7 chr17 2579267 2579575 -86924978 - AluSg SINE Alu -4 306 1 516 210 129 47 chr17 2579575 2579695 -86924858 - MLT1K LTR MaLR -167 421 271 288 299 13 0 chr17 2579753 2579830 -86924723 - MLT1K LTR MaLR -318 270 193 2204 97 7 3 chr17 2580465 2580763 -86923790 - AluSx SINE Alu -13 299 1 2489 53 0 3 chr17 2583318 2583622 -86920931 - AluSq SINE Alu -10 303 1 27 116 0 0 chr17 2584709 2584855 -86919698 + GC_rich Low_complexity Low_complexity 1 146 0 2173 93 0 31 chr17 2585222 2585543 -86919010 + AluSx SINE Alu 1 311 -1 551 320 82 42 chr17 2585709 2586087 -86918466 - L2 LINE L2 -1 3271 2879 2147 84 3 72 chr17 2586118 2586314 -86918239 - AluSx SINE Alu -3 309 144 2360 60 0 17 chr17 2586314 2586613 -86917940 - AluY SINE Alu -17 294 1 2147 84 3 72 chr17 2586613 2586748 -86917805 - AluSx SINE Alu -168 144 1 2048 108 10 14 chr17 2586748 2587044 -86917509 - AluSg SINE Alu -15 295 1 1433 168 119 0 chr17 2587045 2587313 -86917240 - AluJo SINE Alu -12 300 1 591 328 6 0 chr17 2587363 2587540 -86917013 + MER5B DNA MER1_type 1 178 0 2354 90 0 6 chr17 2587675 2587987 -86916566 + AluSg SINE Alu 1 310 0 800 145 0 36 chr17 2588017 2588155 -86916398 + FRAM SINE Alu 28 160 -16 1397 174 68 14 chr17 2588176 2588457 -86916096 + AluJb SINE Alu 1 296 -16 2430 49 13 0 chr17 2588457 2588763 -86915790 + AluY SINE Alu 1 310 -1 24 0 0 0 chr17 2589159 2589183 -86915370 + AT_rich Low_complexity Low_complexity 1 24 0 804 169 0 0 chr17 2589184 2589302 -86915251 - FLAM_C SINE Alu -24 119 2 2185 88 0 13 chr17 2589340 2589646 -86914907 + AluSx SINE Alu 1 302 -10 725 196 55 0 chr17 2589767 2589930 -86914623 - L1MB2 LINE L1 -5 6166 5995 259 283 0 0 chr17 2590274 2590334 -86914219 + MER91A DNA MER1_type 4 63 -133 210 200 71 94 chr17 2590368 2590453 -86914100 + MER91A DNA MER1_type 18 100 -96 378 0 0 0 chr17 2590653 2590695 -86913858 + (TG)n Simple_repeat Simple_repeat 1 42 0 216 0 0 0 chr17 2590694 2590718 -86913835 + (GA)n Simple_repeat Simple_repeat 1 24 0 * 526 207 18 0 chr17 2592099 2592210 -86912343 + MIR SINE MIR 80 192 -70 2118 118 0 0 chr17 2592566 2592863 -86911690 + AluSx SINE Alu 1 297 -15 2441 47 0 10 chr17 2592863 2593209 -86911344 + AluY SINE Alu 1 311 0 2522 58 3 0 chr17 2593380 2593690 -86910863 - AluSp SINE Alu -2 311 1 2424 76 0 6 chr17 2593876 2594191 -86910362 - AluSp SINE Alu 0 313 1 215 299 29 135 chr17 2594266 2594540 -86910013 + L2 LINE L2 2919 3163 -109 2179 99 3 0 chr17 2594626 2594919 -86909634 - AluY SINE Alu -17 294 1 185 211 0 0 chr17 2595495 2595533 -86909020 - MIR SINE MIR -61 147 110 2166 115 0 0 chr17 2595564 2595860 -86908693 - AluSx SINE Alu -14 298 3 530 236 38 25 chr17 2595925 2596082 -86908471 + MIR3 SINE MIR 35 193 -15 2043 108 3 0 chr17 2596279 2596566 -86907987 + AluSg SINE Alu 1 288 -22 216 0 0 0 chr17 2596566 2596590 -86907963 + (TTAAA)n Simple_repeat Simple_repeat 2 25 0 804 165 0 0 chr17 2596597 2596718 -86907835 + FLAM_C SINE Alu 2 122 -21 1928 122 10 10 chr17 2596730 2597087 -86907466 + AluSx SINE Alu 1 312 0 2450 48 10 16 chr17 2597594 2597907 -86906646 - AluY SINE Alu 0 311 1 575 207 38 44 chr17 2598180 2598204 -86906349 + MIR SINE MIR 32 55 -207 1510 158 15 8 chr17 2598204 2598469 -86906084 - AluJo SINE Alu -45 267 1 575 207 38 44 chr17 2598469 2598619 -86905934 + MIR SINE MIR 55 208 -54 2282 41 48 3 chr17 2598622 2598915 -86905638 + AluY SINE Alu 1 306 -5 2132 112 0 0 chr17 2598920 2599215 -86905338 + AluSx SINE Alu 1 295 -17 2307 87 0 3 chr17 2599217 2599527 -86905026 + AluSc SINE Alu 1 309 0 2236 74 3 7 chr17 2599530 2599818 -86904735 + AluY SINE Alu 1 289 -22 299 25 25 0 chr17 2599818 2599858 -86904695 + (TAGA)n Simple_repeat Simple_repeat 4 44 0 522 256 107 66 chr17 2599982 2600271 -86904282 - L2 LINE L2 -2 3311 3011 1216 164 100 9 chr17 2600278 2600509 -86904044 + MLT1E1 LTR MaLR 1 252 -402 2210 112 0 3 chr17 2600511 2600824 -86903729 + AluSx SINE Alu 1 312 0 1439 142 9 0 chr17 2600900 2601126 -86903427 + AluJb SINE Alu 84 311 -1 564 170 10 0 chr17 2601127 2601227 -86903326 + MLT1E LTR MaLR 493 593 0 251 211 111 11 chr17 2601227 2601317 -86903236 - L2 LINE L2 -258 3014 2916 265 281 0 0 chr17 2601330 2601394 -86903159 - MIR SINE MIR 0 262 199 * 285 350 54 39 chr17 2601392 2601526 -86903027 - L2 LINE L2 -400 2914 2775 2014 110 0 32 chr17 2601526 2601723 -86902830 + AluSx SINE Alu 1 186 -126 2371 73 0 0 chr17 2601723 2602023 -86902530 - AluY SINE Alu -11 300 1 2014 110 0 32 chr17 2602023 2602135 -86902418 + AluSx SINE Alu 186 300 -12 285 350 54 39 chr17 2602135 2602203 -86902350 - L2 LINE L2 -539 2775 2709 1190 153 14 5 chr17 2602206 2602415 -86902138 - AluJo SINE Alu -15 297 87 643 304 57 18 chr17 2602420 2602700 -86901853 - L2 LINE L2 -604 2710 2420 2113 256 88 41 chr17 2602746 2603279 -86901274 + L2 LINE L2 2153 2660 -653 2222 92 0 3 chr17 2603279 2603582 -86900971 + AluSx SINE Alu 1 302 -10 2113 256 88 41 chr17 2603582 2603994 -86900559 + L2 LINE L2 2660 3051 -262 2207 101 0 10 chr17 2603994 2604301 -86900252 - AluSg SINE Alu 0 310 7 2113 256 88 41 chr17 2604301 2604318 -86900235 + L2 LINE L2 3051 3066 -247 1006 161 105 115 chr17 2604318 2604623 -86899930 - AluJo SINE Alu 0 302 1 2113 256 88 41 chr17 2604623 2604770 -86899783 + L2 LINE L2 3066 3312 -1 260 219 70 78 chr17 2604776 2604904 -86899649 - L2 LINE L2 -907 2407 2281 1854 133 16 35 chr17 2604912 2605228 -86899325 + AluJb SINE Alu 3 312 0 201 322 0 0 chr17 2605285 2605372 -86899181 + (TG)n Simple_repeat Simple_repeat 2 88 0 2241 119 0 0 chr17 2606101 2606413 -86898140 - AluSq SINE Alu -1 312 1 2177 85 3 3 chr17 2606810 2607103 -86897450 - AluSx SINE Alu -19 293 1 2068 122 0 0 chr17 2607576 2607870 -86896683 + AluSq SINE Alu 1 294 -19 505 275 64 0 chr17 2607988 2608159 -86896394 - MIR SINE MIR -3 259 78 247 280 63 63 chr17 2608404 2608579 -86895974 + L2 LINE L2 3005 3179 -134 330 67 0 0 chr17 2608633 2608678 -86895875 + (TG)n Simple_repeat Simple_repeat 1 45 0 331 308 0 0 chr17 2609796 2609916 -86894637 + G-rich Low_complexity Low_complexity 1 120 0 323 143 0 0 chr17 2610239 2610295 -86894258 + MIR SINE MIR 71 126 -82 2055 89 13 13 chr17 2610401 2610704 -86893849 + AluSx SINE Alu 1 303 -9 421 144 10 96 chr17 2610836 2610940 -86893613 + MIR SINE MIR 128 222 -40 1919 142 0 0 chr17 2611359 2611669 -86892884 + AluSg SINE Alu 1 310 0 481 284 49 22 chr17 2612035 2612218 -86892335 + MIR SINE MIR 35 222 -40 2080 110 0 0 chr17 2612298 2612615 -86891938 - AluSx SINE Alu 0 317 1 2040 139 0 3 chr17 2612616 2612918 -86891635 - AluSx SINE Alu -11 301 1 1008 188 0 0 chr17 2612942 2613107 -86891446 - AluJo/FRAM SINE Alu -1 301 137 1756 138 14 3 chr17 2613107 2613389 -86891164 - AluJb SINE Alu -5 307 23 463 246 154 11 chr17 2613520 2613695 -86890858 - MIR SINE MIR -49 213 14 264 184 0 20 chr17 2613907 2613956 -86890597 - LTR33 LTR ERVL 0 521 474 1666 104 0 0 chr17 2613962 2614183 -86890370 + AluSq SINE Alu 1 221 -92 1112 45 0 8 chr17 2614183 2614317 -86890236 - AluSc SINE Alu -176 133 1 728 108 0 0 chr17 2614318 2614420 -86890133 - L1M3 LINE L1 -378 5793 5692 2214 52 0 25 chr17 2614426 2614735 -86889818 - AluY SINE Alu 0 308 7 206 32 32 0 chr17 2614773 2614804 -86889749 + (TA)n Simple_repeat Simple_repeat 2 33 0 951 177 6 6 chr17 2614806 2614964 -86889589 - FAM SINE Alu -17 158 1 2342 62 7 3 chr17 2615147 2615455 -86889098 - AluSg SINE Alu -1 309 1 29 78 0 0 chr17 2615714 2615778 -86888775 + GC_rich Low_complexity Low_complexity 1 64 0 23 0 0 0 chr17 2615851 2615874 -86888679 + GC_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr17 2615905 2615927 -86888626 + GC_rich Low_complexity Low_complexity 1 22 0 361 254 82 22 chr17 2616915 2617049 -86887504 - MIR SINE MIR -90 172 31 2020 126 0 10 chr17 2617248 2617549 -86887004 - AluJb SINE Alu -10 302 5 398 319 28 7 chr17 2617620 2617761 -86886792 + MLT1K LTR MaLR 174 317 -271 2378 64 0 0 chr17 2618005 2618300 -86886253 - AluY SINE Alu -16 295 1 1986 127 3 0 chr17 2618313 2618604 -86885949 - AluSg SINE Alu -18 292 1 528 232 26 46 chr17 2618844 2618995 -86885558 - MLT1K LTR MaLR -3 585 438 1414 150 7 66 chr17 2618998 2619271 -86885282 - AluJo SINE Alu -55 257 1 600 329 35 41 chr17 2619277 2619410 -86885143 - L1MC/D LINE L1 -2030 5778 5646 1694 164 23 13 chr17 2619410 2619579 -86884974 - AluJb SINE Alu -10 302 127 2342 92 0 0 chr17 2619579 2619882 -86884671 - AluSq SINE Alu -10 303 1 1694 164 23 13 chr17 2619882 2620011 -86884542 - AluJb SINE Alu -185 127 1 600 329 35 41 chr17 2620011 2620221 -86884332 - L1MC/D LINE L1 -2162 5646 5437 1874 56 0 0 chr17 2620223 2620454 -86884099 + AluY SINE Alu 81 311 0 2263 90 0 0 chr17 2620482 2620772 -86883781 - AluSx SINE Alu -22 290 1 1427 162 15 19 chr17 2620803 2621074 -86883479 - L1MC3 LINE L1 -200 7585 7316 2143 128 0 0 chr17 2621074 2621386 -86883167 - AluSq SINE Alu -1 312 1 2278 96 3 6 chr17 2621405 2621719 -86882834 - AluSp SINE Alu 0 313 1 507 196 10 0 chr17 2621758 2621855 -86882698 + MER2 DNA MER2_type 1 98 -247 1408 167 0 50 chr17 2621926 2622109 -86882444 - L1M4 LINE L1 -635 5543 5377 2479 65 3 0 chr17 2622109 2622418 -86882135 - AluY SINE Alu -1 310 1 1408 167 0 50 chr17 2622418 2622516 -86882037 - L1M4 LINE L1 -801 5377 5276 2076 111 13 25 chr17 2622518 2622833 -86881720 - AluSx SINE Alu -1 311 1 312 179 0 0 chr17 2622834 2622890 -86881663 - MLT1A2 LTR MaLR -318 56 1 1237 173 5 0 chr17 2622905 2623107 -86881446 - AluJo SINE Alu -109 203 1 2133 125 0 0 chr17 2623545 2623857 -86880696 + AluSx SINE Alu 1 312 0 308 314 8 42 chr17 2624095 2624213 -86880340 + MIR3 SINE MIR 85 198 -10 2077 100 28 0 chr17 2624281 2624572 -86879981 + AluSx SINE Alu 1 299 -13 2346 97 0 0 chr17 2624572 2624882 -86879671 + AluSg SINE Alu 1 310 0 272 338 116 0 chr17 2625270 2625468 -86879085 + L2 LINE L2 2341 2561 -753 772 148 49 0 chr17 2625471 2625593 -86878960 + FLAM_A SINE Alu 1 128 -5 2282 64 0 14 chr17 2625593 2625888 -86878665 + AluY SINE Alu 5 295 -16 1428 107 0 10 chr17 2625895 2626120 -86878433 + AluSg/x SINE Alu 78 300 0 209 279 66 0 chr17 2626120 2626181 -86878372 + L2 LINE L2 2643 2707 -607 1458 171 67 56 chr17 2626367 2626490 -86878063 + MLT1A1 LTR MaLR 1 121 -244 1682 114 103 0 chr17 2626490 2626752 -86877801 + AluSg SINE Alu 3 291 -19 1458 171 67 56 chr17 2626752 2626985 -86877568 + MLT1A1 LTR MaLR 121 361 -4 184 292 0 0 chr17 2627000 2627048 -86877505 + L2 LINE L2 3000 3047 -225 2288 98 7 0 chr17 2627213 2627519 -86877034 + AluSg SINE Alu 1 308 -2 771 311 73 87 chr17 2627576 2627869 -86876684 - L1MC4a LINE L1 -1742 6066 5783 2129 92 14 7 chr17 2627869 2628163 -86876390 - AluY SINE Alu -15 296 1 771 311 73 87 chr17 2628163 2628431 -86876122 - L1MC4a LINE L1 -2025 5783 5513 195 262 0 0 chr17 2628481 2628523 -86876030 + L2 LINE L2 3168 3209 -63 2231 102 0 0 chr17 2628541 2628844 -86875709 + AluSq SINE Alu 1 303 -10 1831 167 0 16 chr17 2629076 2629393 -86875160 + AluJo SINE Alu 1 312 0 2412 35 0 0 chr17 2629407 2629754 -86874799 + AluY SINE Alu 3 349 0 334 223 16 144 chr17 2629825 2629923 -86874630 - L3 LINE CR1 -111 1466 1402 2272 106 0 0 chr17 2629923 2630234 -86874319 + AluSx SINE Alu 2 312 0 334 223 16 144 chr17 2630234 2630323 -86874230 - L3 LINE CR1 -175 1402 1303 2104 120 0 19 chr17 2630890 2631248 -86873305 + AluSx SINE Alu 1 352 0 2241 100 13 0 chr17 2631612 2631921 -86872632 - AluSq SINE Alu 0 313 1 539 169 0 0 chr17 2632035 2632118 -86872435 - FLAM_A SINE Alu -16 126 44 1946 114 11 4 chr17 2632125 2632405 -86872148 - AluSq SINE Alu -17 296 15 1506 173 23 36 chr17 2632419 2632726 -86871827 - AluJo SINE Alu -9 303 1 640 209 162 16 chr17 2632733 2632924 -86871629 - MIR SINE MIR -13 249 31 1981 99 75 3 chr17 2632977 2633269 -86871284 - AluSq SINE Alu 0 313 1 455 395 30 31 chr17 2633271 2633808 -86870745 + L3 LINE CR1 186 805 -772 186 43 0 0 chr17 2633808 2633831 -86870722 + (TTCA)n Simple_repeat Simple_repeat 3 25 0 455 395 30 31 chr17 2633831 2633842 -86870711 + L3 LINE CR1 805 815 -762 2222 80 7 0 chr17 2633857 2634189 -86870364 - AluSq SINE Alu 0 334 1 258 313 132 35 chr17 2634196 2634423 -86870130 + L3 LINE CR1 796 1044 -533 1947 103 41 3 chr17 2634612 2634902 -86869651 - AluSx SINE Alu -11 301 1 2067 121 0 35 chr17 2634948 2635263 -86869290 - AluSx SINE Alu -8 304 1 448 290 55 84 chr17 2635342 2635721 -86868832 - L2 LINE L2 -80 3233 2866 413 333 82 0 chr17 2635756 2635951 -86868602 + L3 LINE CR1 1343 1553 -24 2255 73 0 0 chr17 2636028 2636316 -86868237 + AluSx SINE Alu 1 288 -24 204 217 0 17 chr17 2636826 2636886 -86867667 + (CGG)n Simple_repeat Simple_repeat 3 61 0 321 26 0 0 chr17 2636955 2636993 -86867560 + (GGA)n Simple_repeat Simple_repeat 1 38 0 338 243 0 0 chr17 2638076 2638179 -86866374 + GA-rich Low_complexity Low_complexity 2 104 0 230 345 12 12 chr17 2638757 2638841 -86865712 + MIR SINE MIR 2 85 -177 310 197 33 0 chr17 2639330 2639391 -86865162 + MIR SINE MIR 74 136 -72 227 357 0 18 chr17 2639459 2639571 -86864982 + L3 LINE CR1 1443 1552 -25 2242 88 0 0 chr17 2640187 2640481 -86864072 - AluSp SINE Alu -18 295 2 403 315 0 0 chr17 2641666 2642100 -86862453 + (TG)n Simple_repeat Simple_repeat 1 434 0 659 184 15 167 chr17 2642725 2642865 -86861688 - MIR SINE MIR -1 261 183 2188 98 0 3 chr17 2642865 2643160 -86861393 + AluSx SINE Alu 1 294 -18 659 184 15 167 chr17 2643160 2643307 -86861246 - MIR SINE MIR -79 183 15 303 325 149 24 chr17 2643332 2643587 -86860966 + L2 LINE L2 3013 3299 -14 192 40 0 0 chr17 2643587 2643612 -86860941 + (TGAA)n Simple_repeat Simple_repeat 4 28 0 303 227 30 0 chr17 2643678 2643744 -86860809 + MIR SINE MIR 5 72 -190 989 198 160 55 chr17 2643745 2644088 -86860465 - MLT1G1 LTR MaLR 0 595 217 2122 117 0 3 chr17 2644097 2644404 -86860149 - AluY SINE Alu -5 306 1 2237 101 0 0 chr17 2644406 2644702 -86859851 - AluSx SINE Alu -16 296 1 1674 198 36 51 chr17 2645515 2645930 -86858623 + LTR2 LTR ERV1 41 449 0 229 170 0 21 chr17 2645931 2645978 -86858575 + MIR SINE MIR 85 130 -78 2345 73 3 0 chr17 2646031 2646332 -86858221 - AluSq SINE Alu -11 302 1 353 301 58 0 chr17 2646343 2646446 -86858107 - MIR SINE MIR -68 140 32 2140 100 0 28 chr17 2646757 2647078 -86857475 - AluSx SINE Alu 0 312 1 2132 95 10 7 chr17 2647078 2647382 -86857171 - AluSx SINE Alu -7 305 1 1585 186 34 3 chr17 2647386 2647681 -86856872 - AluJo SINE Alu -2 310 7 2311 94 0 0 chr17 2647691 2647998 -86856555 - AluY SINE Alu -4 307 1 322 874 0 27 chr17 2648002 2648295 -86856258 - L1MC4a LINE L1 -232 5889 5542 2381 147 112 68 chr17 2648295 2648359 -86856194 - MLT2B1 LTR ERVL 0 520 460 195 42 0 0 chr17 2648359 2648383 -86856170 + (TG)n Simple_repeat Simple_repeat 2 25 0 2381 147 112 68 chr17 2648383 2648425 -86856128 - MLT2B1 LTR ERVL -60 460 421 1927 122 0 45 chr17 2648425 2648737 -86855816 - AluSx SINE Alu -10 302 5 2381 147 112 68 chr17 2648737 2649127 -86855426 - MLT2B1 LTR ERVL -99 421 1 322 874 0 27 chr17 2649127 2649145 -86855408 - L1MC4a LINE L1 -578 5543 5572 1804 123 39 7 chr17 2649194 2649478 -86855075 - AluJb SINE Alu -18 294 2 1738 114 0 70 chr17 2649645 2649943 -86854610 + AluSx SINE Alu 36 312 0 2125 101 7 23 chr17 2650242 2650550 -86854003 - AluSx SINE Alu -9 303 1 181 373 127 0 chr17 2650582 2650700 -86853853 - MIR3 SINE MIR -30 178 46 2103 118 0 0 chr17 2651057 2651353 -86853200 + AluSx SINE Alu 4 299 -13 407 276 135 0 chr17 2651687 2651843 -86852710 + MIR SINE MIR 79 255 -7 2290 106 0 0 chr17 2651980 2652291 -86852262 - AluSx SINE Alu -1 311 1 366 161 0 0 chr17 2652524 2652586 -86851967 - MIR SINE MIR -116 146 85 2361 87 0 0 chr17 2653285 2653585 -86850968 - AluSq SINE Alu -13 300 1 191 365 54 0 chr17 2653641 2653715 -86850838 + L2 LINE L2 3168 3245 -27 341 313 29 34 chr17 2653787 2653950 -86850603 - MLT1K LTR MaLR -4 584 421 2068 89 38 0 chr17 2653950 2654241 -86850312 + AluSx SINE Alu 1 302 -10 341 313 29 34 chr17 2654241 2654285 -86850268 - MLT1K LTR MaLR -167 421 378 2336 102 0 3 chr17 2654995 2655309 -86849244 - AluSq SINE Alu 0 313 1 183 288 51 17 chr17 2655456 2655515 -86849038 - L2 LINE L2 -21 3251 3191 219 318 6 35 chr17 2655891 2656061 -86848492 + (TG)n Simple_repeat Simple_repeat 1 165 0 213 238 0 0 chr17 2657010 2657090 -86847463 + (TG)n Simple_repeat Simple_repeat 1 80 0 186 150 0 0 chr17 2657173 2657213 -86847340 + (TG)n Simple_repeat Simple_repeat 1 40 0 222 234 234 0 chr17 2658398 2658492 -86846061 + L2 LINE L2 3147 3262 -10 328 358 20 35 chr17 2659023 2659224 -86845329 + MIR SINE MIR 11 208 -54 279 331 24 0 chr17 2659717 2659844 -86844709 + (ATGGTG)n Simple_repeat Simple_repeat 2 131 0 395 214 0 11 chr17 2660370 2660459 -86844094 + MIR SINE MIR 92 179 -83 2289 107 0 0 chr17 2660971 2661279 -86843274 - AluSc SINE Alu -1 308 1 2338 95 0 0 chr17 2661324 2661628 -86842925 + AluSx SINE Alu 1 304 -8 474 18 0 0 chr17 2661726 2661781 -86842772 + (TG)n Simple_repeat Simple_repeat 1 55 0 2012 108 28 3 chr17 2662559 2662845 -86841708 + AluSq SINE Alu 1 293 -20 205 277 15 15 chr17 2662873 2662938 -86841615 - L2 LINE L2 -213 3059 2995 237 278 0 42 chr17 2663020 2663092 -86841461 + MIR SINE MIR 85 153 -109 283 260 13 0 chr17 2663428 2663505 -86841048 - MLT1K LTR MaLR -2 586 509 782 254 68 36 chr17 2663595 2663728 -86840825 + L1M4 LINE L1 4597 4724 -1422 1949 142 0 0 chr17 2663728 2664045 -86840508 + AluSx SINE Alu 1 317 0 782 254 68 36 chr17 2664045 2664162 -86840391 + L1M4 LINE L1 4724 4856 -1290 506 339 86 5 chr17 2664411 2664597 -86839956 - MIR SINE MIR -15 247 47 342 196 134 31 chr17 2664971 2665068 -86839485 + MIR3 SINE MIR 95 201 -7 396 283 53 0 chr17 2665157 2665270 -86839283 + L2 LINE L2 3194 3312 -1 2043 117 17 3 chr17 2665483 2665651 -86838902 - AluSx SINE Alu -8 304 129 198 0 0 0 chr17 2665651 2665673 -86838880 + (TTA)n Simple_repeat Simple_repeat 2 23 0 2043 117 17 3 chr17 2665673 2665804 -86838749 - AluSx SINE Alu -183 129 1 192 135 0 0 chr17 2665878 2665915 -86838638 + (TG)n Simple_repeat Simple_repeat 2 38 0 2033 104 0 14 chr17 2666508 2666828 -86837725 - AluSx SINE Alu 0 316 1 206 31 0 31 chr17 2666828 2666860 -86837693 + (TTA)n Simple_repeat Simple_repeat 2 32 0 1426 141 133 16 chr17 2666860 2667115 -86837438 - AluSx SINE Alu -27 285 1 1104 72 0 0 chr17 2667189 2667328 -86837225 - AluSq/x SINE Alu -173 139 1 1100 211 119 19 chr17 2668038 2668350 -86836203 + MER61B LTR ERV1 1 425 0 500 293 100 78 chr17 2670443 2670492 -86834061 - L3 LINE CR1 -2 1575 1529 1297 56 0 0 chr17 2670492 2670654 -86833899 - L1PA4 LINE L1 0 6155 5994 2496 72 0 0 chr17 2670654 2670960 -86833593 - AluSg SINE Alu -4 306 1 500 293 100 78 chr17 2670960 2671359 -86833194 - L3 LINE CR1 -47 1530 1116 241 212 30 81 chr17 2671419 2671518 -86833035 - MIR SINE MIR -56 152 59 2294 95 0 3 chr17 2671705 2672010 -86832543 - AluSx SINE Alu -8 304 1 1041 96 0 0 chr17 2672010 2672146 -86832407 - AluSq/x SINE Alu -177 136 1 669 207 5 88 chr17 2672774 2672839 -86831714 + MER5B DNA MER1_type 1 70 -108 2351 94 0 0 chr17 2672839 2673137 -86831416 + AluSq SINE Alu 1 298 -15 669 207 5 88 chr17 2673137 2673207 -86831346 + MER5B DNA MER1_type 70 118 -60 2076 104 0 17 chr17 2673207 2673506 -86831047 - AluSg SINE Alu -16 294 1 669 207 5 88 chr17 2673506 2673562 -86830991 + MER5B DNA MER1_type 118 177 -1 527 208 39 101 chr17 2673677 2673811 -86830742 - MER20 DNA MER1_type -25 194 76 2231 83 16 19 chr17 2673811 2674124 -86830429 + AluSx SINE Alu 1 312 0 527 208 39 101 chr17 2674124 2674196 -86830357 - MER20 DNA MER1_type -143 76 1 445 189 78 0 chr17 2674298 2674388 -86830165 + MIR SINE MIR 28 124 -138 368 278 45 65 chr17 2675162 2675351 -86829202 - MER5A DNA MER1_type -3 175 1 646 188 100 35 chr17 2675397 2675567 -86828986 + MIR SINE MIR 71 251 -11 2265 82 0 0 chr17 2675588 2675913 -86828640 - AluSx SINE Alu 0 325 1 2224 71 0 3 chr17 2676465 2676747 -86827806 - AluSx SINE Alu -8 304 24 3102 179 17 22 chr17 2676753 2677109 -86827444 - L1MB3 LINE L1 0 6183 5830 2061 130 0 19 chr17 2677109 2677425 -86827128 - AluSx SINE Alu -2 310 1 3102 179 17 22 chr17 2677425 2677655 -86826898 - L1MB3 LINE L1 -353 5830 5600 2189 108 3 0 chr17 2677656 2677952 -86826601 - AluSq SINE Alu -16 297 1 2257 99 3 0 chr17 2677963 2678267 -86826286 - AluY SINE Alu -6 305 1 2154 71 18 14 chr17 2678425 2678759 -86825794 - AluSx SINE Alu 0 335 1 797 278 17 30 chr17 2678878 2679112 -86825441 + MIR SINE MIR 32 262 0 2355 65 0 7 chr17 2679154 2679446 -86825107 - AluY SINE Alu -16 295 6 956 141 58 0 chr17 2679450 2679606 -86824947 - AluSg/x SINE Alu -6 304 140 2104 97 28 0 chr17 2679608 2679897 -86824656 - AluSx SINE Alu -13 299 3 1524 181 60 17 chr17 2679913 2680212 -86824341 - AluJb SINE Alu 0 312 1 298 313 110 49 chr17 2680219 2680465 -86824088 - L1MC/D LINE L1 -1988 5820 5560 2134 93 10 3 chr17 2680470 2680770 -86823783 + AluSq SINE Alu 1 302 -11 1685 96 57 57 chr17 2680865 2681166 -86823387 - AluSg SINE Alu 0 301 1 380 181 150 16 chr17 2681376 2681503 -86823050 - L1ME4a LINE L1 -3 6118 5975 2003 133 7 0 chr17 2681505 2681805 -86822748 - AluJb SINE Alu -10 302 1 872 150 33 56 chr17 2681808 2681988 -86822565 - MER3 DNA MER1_type -80 129 1 1483 181 18 18 chr17 2682471 2682752 -86821801 + AluJo SINE Alu 1 281 -31 237 33 0 0 chr17 2682752 2682782 -86821771 + (T)n Simple_repeat Simple_repeat 1 30 0 946 90 37 148 chr17 2682789 2682839 -86821714 + AluSx SINE Alu 11 65 -247 1298 25 12 6 chr17 2682839 2683002 -86821551 - L1PA4 LINE L1 0 6155 5992 946 90 37 148 chr17 2683002 2683140 -86821413 + AluSx SINE Alu 65 178 -134 2519 58 7 0 chr17 2683973 2684282 -86820271 + AluY SINE Alu 1 311 0 2245 102 3 0 chr17 2684297 2684592 -86819961 + AluSx SINE Alu 1 296 -16 2478 69 10 0 chr17 2684594 2684899 -86819654 + AluSp SINE Alu 3 310 -3 1561 180 50 11 chr17 2685082 2685365 -86819188 - AluJo SINE Alu -18 294 1 217 254 14 56 chr17 2685590 2685661 -86818892 - L2 LINE L2 -1 3312 3245 * 821 254 19 5 chr17 2685649 2685854 -86818699 + MIR SINE MIR 35 242 -20 2145 95 0 46 chr17 2686101 2686426 -86818127 - AluY SINE Alu -1 310 1 2268 110 0 0 chr17 2686857 2687165 -86817388 + AluSc SINE Alu 1 308 -1 368 330 64 34 chr17 2687421 2687657 -86816896 - L2 LINE L2 -50 3263 3021 1329 78 0 0 chr17 2687657 2687824 -86816729 + AluSx SINE Alu 1 167 -145 2342 84 7 0 chr17 2688190 2688498 -86816055 + AluSx SINE Alu 1 310 -2 296 197 68 68 chr17 2688561 2688678 -86815875 - L2 LINE L2 -277 3036 2920 2262 80 10 3 chr17 2689116 2689415 -86815138 - AluSx SINE Alu -11 301 1 783 197 0 0 chr17 2689950 2690082 -86814471 - FLAM_C SINE Alu 0 133 2 502 151 0 0 chr17 2690137 2690223 -86814330 - L1MB1 LINE L1 -1 6167 6082 2001 92 0 18 chr17 2690282 2690564 -86813989 + AluSx SINE Alu 22 298 -14 2308 61 0 10 chr17 2690565 2690882 -86813671 + AluSc SINE Alu 1 309 0 779 125 7 0 chr17 2691060 2691196 -86813357 + (TCCCC)n Simple_repeat Simple_repeat 1 137 0 2180 112 7 0 chr17 2691271 2691575 -86812978 - AluSx SINE Alu -6 306 1 248 217 130 99 chr17 2691575 2691736 -86812817 - L1MC4a LINE L1 -1863 5945 5780 1651 169 13 26 chr17 2691807 2692120 -86812433 + AluJo SINE Alu 1 309 -3 2266 105 0 0 chr17 2692122 2692427 -86812126 + AluSg SINE Alu 1 305 -5 2500 59 0 0 chr17 2692475 2692782 -86811771 + AluY SINE Alu 1 307 -4 1917 122 13 10 chr17 2692893 2693197 -86811356 + AluSx SINE Alu 1 305 -7 390 277 28 74 chr17 2693226 2693344 -86811209 - L1ME3 LINE L1 -316 5850 5728 2218 79 21 0 chr17 2693344 2693635 -86810918 - AluSx SINE Alu -15 297 1 390 277 28 74 chr17 2693635 2693670 -86810883 - L1ME3 LINE L1 -438 5728 5693 2001 53 0 0 chr17 2693670 2693915 -86810638 + AluY SINE Alu 64 308 -3 390 277 28 74 chr17 2693915 2694054 -86810499 - L1ME3 LINE L1 -473 5693 5565 1870 161 0 0 chr17 2694721 2695007 -86809546 + AluJb SINE Alu 9 294 -18 183 42 0 0 chr17 2695090 2695114 -86809439 + (TTAAA)n Simple_repeat Simple_repeat 1 24 0 2154 103 0 10 chr17 2695118 2695420 -86809133 - AluY SINE Alu -12 299 1 2183 78 0 3 chr17 2695429 2695711 -86808842 - AluSx SINE Alu -23 289 9 860 163 36 24 chr17 2695769 2695935 -86808618 + AluJo SINE Alu 123 290 -22 882 270 34 142 chr17 2696431 2696548 -86808005 - MLT1K LTR MaLR -21 567 439 1912 138 0 0 chr17 2696548 2696866 -86807687 + AluSx SINE Alu 1 318 0 882 270 34 142 chr17 2696866 2697176 -86807377 - MLT1K LTR MaLR -149 439 224 1850 160 0 0 chr17 2697176 2697469 -86807084 + AluJb SINE Alu 10 302 -10 882 270 34 142 chr17 2697469 2697658 -86806895 - MLT1K LTR MaLR -364 224 16 2254 93 0 0 chr17 2697803 2698104 -86806449 - AluY SINE Alu -10 301 1 311 307 11 0 chr17 2698105 2698193 -86806360 + MIR SINE MIR 62 150 -112 2307 97 0 3 chr17 2698205 2698516 -86806037 - AluSg SINE Alu 0 310 1 1091 188 21 52 chr17 2698895 2699183 -86805370 - MER113 DNA MER1_type? -43 478 200 2182 110 0 22 chr17 2699219 2699538 -86805015 + AluSx SINE Alu 1 312 0 1733 185 70 108 chr17 2699539 2699992 -86804561 - L1MC3 LINE L1 -35 7750 7281 1878 66 8 0 chr17 2699992 2700234 -86804319 - AluSp SINE Alu -7 306 63 1733 185 70 108 chr17 2700234 2700342 -86804211 - L1MC3 LINE L1 -504 7281 7211 2022 110 3 31 chr17 2700342 2700661 -86803892 - AluSx SINE Alu -2 310 1 1733 185 70 108 chr17 2700661 2700698 -86803855 - L1MC3 LINE L1 -574 7211 7174 661 154 89 8 chr17 2700723 2700846 -86803707 - FLAM_A SINE Alu 0 133 1 2087 115 0 0 chr17 2700914 2701209 -86803344 + AluJb SINE Alu 1 295 -17 1140 123 0 0 chr17 2701211 2701381 -86803172 + AluSq SINE Alu 141 310 -3 22 0 0 0 chr17 2701390 2701412 -86803141 + AT_rich Low_complexity Low_complexity 1 22 0 2373 60 0 10 chr17 2701502 2701804 -86802749 - AluY SINE Alu -12 299 1 2210 66 0 0 chr17 2702479 2702751 -86801802 + AluSx SINE Alu 34 305 -7 216 208 75 0 chr17 2703098 2703151 -86801402 + CT-rich Low_complexity Low_complexity 1 57 0 269 294 59 112 chr17 2703156 2703442 -86801111 - L2 LINE L2 -18 3295 3025 2219 93 7 3 chr17 2703483 2703785 -86800768 - AluSx SINE Alu -9 303 1 2354 80 0 0 chr17 2704207 2704518 -86800035 - AluY SINE Alu 0 311 1 2149 103 0 0 chr17 2705332 2705624 -86798929 - AluSx SINE Alu -3 309 18 710 227 178 58 chr17 2705625 2705779 -86798774 - L1ME2 LINE L1 -34 6130 5996 2048 111 0 0 chr17 2705779 2706092 -86798461 + AluSg SINE Alu 1 313 0 2017 126 0 3 chr17 2706100 2706401 -86798152 + AluSg SINE Alu 1 300 -10 710 227 178 58 chr17 2706401 2706601 -86797952 - L1ME2 LINE L1 -174 5990 5722 1164 129 0 6 chr17 2706603 2706796 -86797757 - AluSg/x SINE Alu 0 306 115 643 308 25 5 chr17 2706834 2707032 -86797521 - MIR SINE MIR -60 202 1 2344 70 0 0 chr17 2707202 2707504 -86797049 - AluSg SINE Alu -7 303 2 2105 108 3 13 chr17 2708697 2709012 -86795541 - AluSx SINE Alu 0 312 1 769 242 128 33 chr17 2710093 2710198 -86794355 - MER113 DNA MER1_type? -95 426 332 2512 50 0 0 chr17 2710198 2710498 -86794055 - AluY SINE Alu -11 300 1 769 242 128 33 chr17 2710498 2710665 -86793888 - MER113 DNA MER1_type? -189 332 182 2292 79 0 7 chr17 2710665 2710969 -86793584 + AluY SINE Alu 1 302 -9 2111 105 13 0 chr17 2710978 2711284 -86793269 + AluSq SINE Alu 1 310 -3 769 242 128 33 chr17 2711284 2711389 -86793164 - MER113 DNA MER1_type? -346 175 1 778 85 0 77 chr17 2711939 2712069 -86792484 - FLAM_C SINE Alu -13 130 11 210 37 0 0 chr17 2712526 2712553 -86792000 + (TGGGGG)n Simple_repeat Simple_repeat 4 30 0 205 186 0 0 chr17 2712788 2712831 -86791722 + A-rich Low_complexity Low_complexity 2 44 0 237 239 18 46 chr17 2713655 2713764 -86790789 + G-rich Low_complexity Low_complexity 3 108 0 49 76 0 0 chr17 2713831 2713936 -86790617 + GC_rich Low_complexity Low_complexity 1 105 0 22 70 0 0 chr17 2713952 2713995 -86790558 + GC_rich Low_complexity Low_complexity 1 43 0 262 140 21 97 chr17 2714050 2714175 -86790378 + G-rich Low_complexity Low_complexity 1 115 0 1567 216 37 41 chr17 2715434 2715803 -86788750 - MER113 DNA MER1_type? -44 477 108 1863 115 3 11 chr17 2715803 2716112 -86788441 - AluSx SINE Alu 0 307 1 1567 216 37 41 chr17 2716112 2716204 -86788349 - MER113 DNA MER1_type? -413 108 17 2115 110 0 0 chr17 2718016 2718306 -86786247 + AluSx SINE Alu 1 290 -22 1389 187 74 107 chr17 2718620 2718824 -86785729 - L1MC5 LINE L1 -48 7913 7704 1542 144 7 22 chr17 2718824 2719094 -86785459 + AluJb SINE Alu 1 266 -46 1389 187 74 107 chr17 2719094 2719305 -86785248 - L1MC5 LINE L1 -257 7704 7488 2152 114 0 10 chr17 2719305 2719612 -86784941 - AluSx SINE Alu -8 304 1 1389 187 74 107 chr17 2719612 2719644 -86784909 - L1MC5 LINE L1 -473 7488 7456 1782 172 0 0 chr17 2719644 2719934 -86784619 - AluJb SINE Alu -22 290 1 1389 187 74 107 chr17 2719934 2720121 -86784432 - L1MC5 LINE L1 -505 7456 7298 859 304 98 43 chr17 2720633 2720791 -86783762 + L2 LINE L2 2606 2754 -559 2189 115 0 6 chr17 2720791 2721104 -86783449 - AluSx SINE Alu -1 311 1 859 304 98 43 chr17 2721104 2721611 -86782942 + L2 LINE L2 2754 3313 0 1096 113 57 0 chr17 2721674 2721833 -86782720 - AluSq SINE Alu -12 301 134 1993 78 0 75 chr17 2721833 2722154 -86782399 - AluY SINE Alu -14 297 1 281 167 0 77 chr17 2722820 2722898 -86781655 - MER113 DNA MER1_type? -308 213 142 2302 103 3 0 chr17 2722914 2723225 -86781328 + AluSx SINE Alu 1 312 0 2240 65 17 14 chr17 2723973 2724267 -86780286 + AluSq SINE Alu 1 295 -18 280 305 9 19 chr17 2724419 2724524 -86780029 - L2 LINE L2 -14 3299 3196 345 314 115 20 chr17 2724528 2724780 -86779773 + MER102a DNA MER1_type 34 309 -21 391 274 184 17 chr17 2725149 2725328 -86779225 - MIR SINE MIR -34 228 20 2091 101 3 0 chr17 2726781 2727098 -86777455 - AluSx SINE Alu 0 318 1 2012 134 0 3 chr17 2727100 2727398 -86777155 - AluSg SINE Alu -13 297 1 1612 283 67 16 chr17 2727420 2727975 -86776578 - MLT1K LTR MaLR -4 584 2 2250 96 0 3 chr17 2728715 2729017 -86775536 - AluSx SINE Alu -11 301 1 1846 190 25 11 chr17 2729043 2729401 -86775152 - MLT1A1 LTR MaLR 0 365 3 1043 186 80 0 chr17 2729414 2729640 -86774913 + L1MB4 LINE L1 5903 6146 -34 2085 104 7 10 chr17 2730316 2730615 -86773938 - AluSg SINE Alu -12 298 1 301 189 67 168 chr17 2730649 2730887 -86773666 - L1ME4a LINE L1 -11 6110 5897 649 288 91 81 chr17 2730889 2731142 -86773411 - MLT1K LTR MaLR -3 585 336 2211 119 0 0 chr17 2731142 2731454 -86773099 - AluSq SINE Alu -1 312 1 649 288 91 81 chr17 2731454 2731770 -86772783 - MLT1K LTR MaLR -252 336 10 715 278 66 32 chr17 2731819 2732140 -86772413 + L1MC4a LINE L1 5493 5826 -320 2080 116 34 0 chr17 2732140 2732433 -86772120 + AluSx SINE Alu 1 303 -9 682 295 114 41 chr17 2732457 2732870 -86771683 - MER65A LTR ERV1 -2 443 1 1185 164 121 4 chr17 2732893 2733125 -86771428 - AluJo SINE Alu -16 296 38 1261 138 0 0 chr17 2733132 2733321 -86771232 + AluSg/x SINE Alu 114 302 -10 1987 135 0 46 chr17 2733376 2733703 -86770850 + AluJb SINE Alu 1 312 0 547 117 43 0 chr17 2733860 2733954 -86770599 + L1MB5 LINE L1 6031 6128 -46 2074 81 3 47 chr17 2733954 2734274 -86770279 - AluSq SINE Alu 0 307 1 368 271 102 0 chr17 2734275 2734393 -86770160 + MIR SINE MIR 63 192 -70 954 216 121 67 chr17 2735150 2735260 -86769293 - LTR56 LTR ERV1 -1 444 341 2148 115 0 3 chr17 2735260 2735565 -86768988 - AluSx SINE Alu -8 304 1 954 216 121 67 chr17 2735565 2735875 -86768678 - LTR56 LTR ERV1 -104 341 1 250 343 0 19 chr17 2736003 2736108 -86768445 + L2 LINE L2 2304 2406 -908 2195 75 0 0 chr17 2736121 2736435 -86768118 - AluY SINE Alu 0 314 1 2795 149 16 69 chr17 2736476 2737081 -86767472 - MER4B LTR ERV1 -36 574 2 2363 75 7 0 chr17 2737082 2737387 -86767166 - AluSp SINE Alu -6 307 1 747 335 23 0 chr17 2737398 2737658 -86766895 + L2 LINE L2 2480 2745 -569 1958 107 0 11 chr17 2737664 2737935 -86766618 + AluSx SINE Alu 1 268 -44 309 371 54 5 chr17 2737978 2738164 -86766389 - L2 LINE L2 -530 2784 2590 271 280 229 0 chr17 2738425 2738582 -86765971 - L2 LINE L2 -896 2418 2226 436 363 14 5 chr17 2738990 2739213 -86765340 + MIR SINE MIR 34 258 -4 2215 123 0 0 chr17 2739312 2739613 -86764940 - AluSq SINE Alu -12 301 1 2483 100 0 0 chr17 2739750 2740060 -86764493 - AluSx SINE Alu -2 310 1 2349 98 0 3 chr17 2740062 2740359 -86764194 - AluSq SINE Alu -17 296 1 303 274 29 0 chr17 2740610 2740712 -86763841 - MIR SINE MIR -67 141 37 585 56 0 0 chr17 2740831 2740924 -86763629 + AluSp/q SINE Alu 212 304 0 366 232 191 10 chr17 2740952 2741146 -86763407 + L1 LINE L1 3722 3950 -2196 2498 94 0 0 chr17 2741423 2741732 -86762821 - AluSg SINE Alu -1 309 1 2389 79 6 29 chr17 2741983 2742299 -86762254 - AluY SINE Alu -2 309 1 2031 150 70 20 chr17 2742299 2742698 -86761855 + L1MD1 LINE L1 5582 6000 -359 778 171 7 7 chr17 2742701 2742853 -86761700 + L1MD1 LINE L1 6084 6235 -7 1258 108 12 0 chr17 2742855 2743022 -86761531 - AluSq SINE Alu -15 298 130 2223 99 0 48 chr17 2743412 2743726 -86760827 - AluSq SINE Alu -14 299 1 265 208 24 112 chr17 2743765 2743890 -86760663 - L2 LINE L2 -936 2378 2265 599 286 77 21 chr17 2744137 2744371 -86760182 + Charlie8 DNA MER1_type 26 272 -2145 587 167 19 0 chr17 2744399 2744507 -86760046 - L1MB5 LINE L1 -6 6168 6059 1732 122 0 8 chr17 2744508 2744754 -86759799 - AluSx SINE Alu -10 302 59 1020 93 10 62 chr17 2744855 2744991 -86759562 - L1MC/D LINE L1 -892 5467 5342 2204 117 0 0 chr17 2744991 2745281 -86759272 - AluSx SINE Alu -22 290 1 1020 93 10 62 chr17 2745281 2745337 -86759216 - L1MC/D LINE L1 -1017 5342 5285 2688 161 28 47 chr17 2745345 2745947 -86758606 - L1MB7 LINE L1 0 6184 5594 267 182 36 0 chr17 2745947 2746002 -86758551 - L1M4 LINE L1 -534 5650 5594 265 295 0 0 chr17 2745998 2746059 -86758494 - L1M4 LINE L1 -530 5654 5594 * 330 206 7 0 chr17 2746042 2746115 -86758438 - L1M3 LINE L1 -510 5670 5595 339 223 30 5 chr17 2746118 2746240 -86758313 - L1M1 LINE L1 -510 5670 5582 * 926 218 14 45 chr17 2746215 2746435 -86758118 - L1M4 LINE L1 -506 5668 5456 863 71 0 0 chr17 2746535 2746633 -86757920 - AluSq/x SINE Alu -186 126 29 180 97 0 0 chr17 2747266 2747297 -86757256 + (TTTTA)n Simple_repeat Simple_repeat 2 32 0 1681 159 3 14 chr17 2747299 2747582 -86756971 - AluSx SINE Alu -30 282 3 427 94 0 0 chr17 2747699 2747763 -86756790 + Alu SINE Alu 236 299 -12 183 385 13 0 chr17 2747977 2748055 -86756498 - L2 LINE L2 -55 3258 3180 917 219 40 4 chr17 2748480 2748731 -86755822 - L1MB3 LINE L1 0 6183 5924 576 200 77 0 chr17 2748734 2748864 -86755689 - MER46A DNA MER2_type 0 236 97 1153 74 0 0 chr17 2748864 2748999 -86755554 + AluSq/x SINE Alu 1 135 -178 2277 116 3 0 chr17 2748999 2749301 -86755252 + AluSx SINE Alu 1 303 -9 592 162 0 0 chr17 2749301 2749400 -86755153 - MER46A DNA MER2_type -132 104 6 2026 98 0 4 chr17 2749526 2749781 -86754772 - AluSx SINE Alu -58 254 1 807 154 7 0 chr17 2749781 2749917 -86754636 + MLT1D LTR MaLR 367 503 -2 2158 97 49 3 chr17 2750359 2750647 -86753906 - AluSx SINE Alu -11 301 1 1447 97 181 30 chr17 2750912 2751211 -86753342 + THE1C LTR MaLR 7 350 -25 665 206 23 0 chr17 2751412 2751543 -86753010 + MER44D DNA MER2_type 600 605 0 275 278 17 17 chr17 2751543 2751658 -86752895 - L1M4 LINE L1 -2399 3747 3633 2564 81 0 7 chr17 2751677 2751987 -86752566 - AluSx SINE Alu -4 308 1 450 308 67 33 chr17 2752352 2752651 -86751902 + L1MC/D LINE L1 5493 5801 -320 373 210 0 27 chr17 2752652 2752759 -86751794 + AluS SINE Alu 2 84 -219 767 217 54 12 chr17 2753432 2753598 -86750955 - MER63A DNA MER1_type -37 173 1 23 0 0 0 chr17 2754498 2754521 -86750032 + AT_rich Low_complexity Low_complexity 1 23 0 1084 222 0 9 chr17 2754930 2755155 -86749398 - MER58A DNA MER1_type 0 224 2 228 185 11 179 chr17 2755164 2755312 -86749241 + MER113 DNA MER1_type? 1 114 -407 2349 91 13 3 chr17 2755312 2755621 -86748932 - AluSp SINE Alu 0 313 2 228 185 11 179 chr17 2755621 2755656 -86748897 + MER113 DNA MER1_type? 114 153 -368 1874 125 96 0 chr17 2757197 2757477 -86747076 - AluSx SINE Alu -5 307 1 201 74 0 0 chr17 2758165 2758192 -86746361 + (GGGTG)n Simple_repeat Simple_repeat 3 29 0 1147 307 60 73 chr17 2758486 2758693 -86745860 - L1M4 LINE L1 -2292 3854 3646 1474 88 206 88 chr17 2758693 2758965 -86745588 - AluSq SINE Alu -9 304 1 1147 307 60 73 chr17 2758965 2759520 -86745033 - L1M4 LINE L1 -2500 3646 3102 283 224 75 0 chr17 2759603 2759670 -86744883 - MIR SINE MIR -85 177 106 740 186 8 0 chr17 2759728 2759857 -86744696 - FLAM_C SINE Alu 0 133 4 337 308 28 41 chr17 2759864 2760182 -86744371 - L1M4 LINE L1 -3104 3042 2729 2023 142 17 0 chr17 2760266 2760555 -86743998 - AluJb SINE Alu -18 294 1 1058 284 83 11 chr17 2760561 2761004 -86743549 + L1MC/D LINE L1 5287 5761 -2047 1719 103 0 0 chr17 2761010 2761233 -86743320 - AluSg/x SINE Alu -1 309 87 922 215 77 11 chr17 2761357 2761650 -86742903 - L1ME LINE L1 -567 5580 5244 2560 72 0 0 chr17 2761659 2761965 -86742588 - AluY SINE Alu -5 306 1 2424 91 0 0 chr17 2761967 2762265 -86742288 - AluSg SINE Alu -12 298 1 636 167 15 38 chr17 2762265 2762397 -86742156 - AluJo/FLAM SINE Alu -173 129 1 2150 129 0 13 chr17 2762399 2762710 -86741843 - AluJb SINE Alu -5 307 1 1058 221 50 31 chr17 2762712 2762870 -86741683 - L1ME LINE L1 -947 5182 5029 2298 102 0 13 chr17 2762870 2763175 -86741378 - AluSc SINE Alu -8 301 1 1058 221 50 31 chr17 2763175 2763373 -86741180 - L1ME LINE L1 -1100 5029 4819 627 311 5 0 chr17 2763421 2763617 -86740936 - MER117 DNA MER1_type 0 197 1 325 212 71 62 chr17 2763620 2763733 -86740820 - MIR SINE MIR -135 127 14 181 331 33 41 chr17 2763701 2763822 -86740731 + MIR SINE MIR 34 153 -55 * 196 196 0 54 chr17 2764420 2764532 -86740021 + C-rich Low_complexity Low_complexity 3 108 0 837 228 92 13 chr17 2766258 2766486 -86738067 + MIR SINE MIR 16 261 -1 477 130 0 0 chr17 2766534 2766603 -86737950 + AluS SINE Alu 2 70 -242 1894 75 0 17 chr17 2766710 2766951 -86737602 - AluSq SINE Alu -76 237 1 969 285 73 39 chr17 2766951 2767750 -86736803 - L1ME LINE L1 -2867 3262 2437 426 275 72 4 chr17 2768297 2768533 -86736020 - L1ME LINE L1 -3759 2370 2119 2184 123 7 13 chr17 2768547 2768857 -86735696 - AluSx SINE Alu -4 308 1 202 222 25 49 chr17 2768886 2768967 -86735586 + T-rich Low_complexity Low_complexity 2 80 0 252 339 87 32 chr17 2769290 2769431 -86735122 - HAL1b LINE L1 -702 646 487 2445 77 0 26 chr17 2769431 2769744 -86734809 - AluY SINE Alu -6 305 1 252 339 87 32 chr17 2769744 2769820 -86734733 - HAL1b LINE L1 -861 487 417 23 54 0 0 chr17 2769877 2769914 -86734639 + AT_rich Low_complexity Low_complexity 1 37 0 519 299 54 9 chr17 2769975 2770199 -86734354 - L1ME LINE L1 -4898 1221 988 219 335 112 29 chr17 2770235 2770262 -86734291 + L2 LINE L2 2661 2684 -630 2250 124 0 0 chr17 2770262 2770569 -86733984 - AluSq SINE Alu -5 308 2 219 335 112 29 chr17 2770569 2770711 -86733842 + L2 LINE L2 2684 2844 -470 285 167 0 0 chr17 2770931 2770979 -86733574 - Alu SINE Alu -247 52 5 2323 63 14 3 chr17 2772891 2773177 -86731376 - AluSx SINE Alu -23 289 1 189 74 0 0 chr17 2774642 2774669 -86729884 + (ATG)n Simple_repeat Simple_repeat 2 28 0 237 297 51 93 chr17 2774721 2774809 -86729744 - MIR SINE MIR -65 143 60 2393 87 3 13 chr17 2774809 2775118 -86729435 + AluSg SINE Alu 1 306 -4 237 297 51 93 chr17 2775118 2775147 -86729406 - MIR SINE MIR -148 60 31 280 355 11 0 chr17 2775263 2775356 -86729197 - MIR SINE MIR -60 148 55 231 193 35 0 chr17 2775629 2775686 -86728867 + T-rich Low_complexity Low_complexity 2 60 0 228 154 0 0 chr17 2775811 2775863 -86728690 + (TAGA)n Simple_repeat Simple_repeat 3 54 0 467 266 140 70 chr17 2775920 2776443 -86728110 - L1MEc LINE L1 -3574 2641 2119 2317 85 0 10 chr17 2777645 2777940 -86726613 - AluY SINE Alu -19 292 1 252 333 43 11 chr17 2778735 2778828 -86725725 + L2 LINE L2 3168 3263 -9 604 291 28 14 chr17 2779658 2779871 -86724682 - MIR SINE MIR -33 229 14 214 200 186 0 chr17 2780041 2780111 -86724442 + MER5A DNA MER1_type 85 167 -22 201 167 19 56 chr17 2780626 2780680 -86723873 + C-rich Low_complexity Low_complexity 2 53 0 2375 100 7 0 chr17 2781256 2781565 -86722988 - AluSx SINE Alu -1 311 1 316 311 8 42 chr17 2781569 2781688 -86722865 - MIR SINE MIR -101 161 47 414 263 68 8 chr17 2781735 2781853 -86722700 + MIR3 SINE MIR 30 154 -54 325 266 79 79 chr17 2782693 2782870 -86721683 + MIR SINE MIR 15 191 -71 2634 62 0 0 chr17 2784255 2784562 -86719991 - AluY SINE Alu -4 307 1 451 326 59 0 chr17 2785354 2785575 -86718978 + L1MC/D LINE L1 5567 5800 -2008 * 756 261 22 14 chr17 2785563 2785839 -86718714 + L1MB5 LINE L1 3334 3611 -2535 * 2579 205 31 7 chr17 2785818 2786512 -86718041 + L1MB5 LINE L1 5182 5890 -284 2252 96 0 0 chr17 2786517 2786842 -86717711 + AluSg SINE Alu 1 325 0 378 211 0 10 chr17 2786902 2787005 -86717548 + L1M4 LINE L1 5597 5694 -470 2151 38 0 0 chr17 2787005 2787244 -86717309 + AluY SINE Alu 1 239 -72 2262 109 3 0 chr17 2788977 2789279 -86715274 + AluSx SINE Alu 2 304 -8 2287 121 3 0 chr17 2789354 2789661 -86714892 - AluSq SINE Alu -5 308 1 345 334 76 12 chr17 2790033 2790278 -86714275 + MIR SINE MIR 3 261 -1 313 314 211 42 chr17 2791168 2791429 -86713124 + L2 LINE L2 2966 3270 -2 180 404 19 0 chr17 2791605 2791709 -86712844 - MIR SINE MIR -110 152 47 336 248 0 76 chr17 2791734 2791839 -86712714 - MIR SINE MIR -106 156 60 1422 19 0 0 chr17 2792098 2792260 -86712293 + L1PA4 LINE L1 5994 6155 0 272 310 78 16 chr17 2792521 2792669 -86711884 + MIR SINE MIR 21 192 -70 1108 153 45 0 chr17 2792773 2792992 -86711561 + AluSg/x SINE Alu 98 324 0 1420 118 34 58 chr17 2792992 2793153 -86711400 + L1M3 LINE L1 5319 5471 -697 2182 76 6 29 chr17 2793153 2793469 -86711084 + AluSc SINE Alu 1 309 0 1420 118 34 58 chr17 2793469 2793603 -86710950 + L1M3 LINE L1 5471 5607 -561 4097 219 55 63 chr17 2793620 2794149 -86710404 - L1M4 LINE L1 -1191 4955 4423 2211 74 29 29 chr17 2794149 2794460 -86710093 - AluY SINE Alu 0 311 1 4097 219 55 63 chr17 2794460 2795064 -86709489 - L1M4 LINE L1 -1723 4423 3834 2154 109 3 3 chr17 2795064 2795376 -86709177 - AluSx SINE Alu 0 312 1 4097 219 55 63 chr17 2795376 2795735 -86708818 - L1M4 LINE L1 -2312 3834 3474 229 209 149 88 chr17 2795971 2796045 -86708508 - MER5A DNA MER1_type -32 157 89 2233 92 3 0 chr17 2796045 2796340 -86708213 - AluSq SINE Alu -17 296 1 229 209 149 88 chr17 2796340 2796413 -86708140 - MER5A DNA MER1_type -100 89 1 452 246 25 49 chr17 2796811 2796933 -86707620 - L2 LINE L2 -2 3311 3193 191 277 161 36 chr17 2797369 2797506 -86707047 - MIR SINE MIR -13 249 96 200 244 0 0 chr17 2798672 2798713 -86705840 - L2 LINE L2 -3 3269 3229 2200 126 7 0 chr17 2799327 2799637 -86704916 - AluSx SINE Alu 0 312 1 338 291 48 79 chr17 2799786 2799891 -86704662 - MIR SINE MIR -13 249 151 2372 95 0 0 chr17 2799891 2800196 -86704357 - AluSx SINE Alu -7 305 1 338 291 48 79 chr17 2800196 2800279 -86704274 - MIR SINE MIR -111 151 67 186 381 27 34 chr17 2800514 2800661 -86703892 + L2 LINE L2 2909 3054 -218 313 190 0 0 chr17 2800665 2800723 -86703830 + MLT1F1 LTR MaLR 6 63 -504 2116 128 3 0 chr17 2800728 2801026 -86703527 + AluJb SINE Alu 7 305 -7 2196 106 0 19 chr17 2801037 2801370 -86703183 + AluSx SINE Alu 1 312 0 367 342 21 13 chr17 2801594 2801818 -86702735 - L1MC/D LINE L1 -382 5739 5579 357 318 139 40 chr17 2802102 2802157 -86702396 - MIR SINE MIR -11 251 203 2013 141 3 0 chr17 2802157 2802462 -86702091 - AluSq SINE Alu -7 306 1 357 318 139 40 chr17 2802462 2802629 -86701924 - MIR SINE MIR -59 203 7 707 217 28 28 chr17 2802877 2803057 -86701496 - MER104 DNA MER2_type 0 180 1 2222 103 0 0 chr17 2803256 2803548 -86701005 + AluSx SINE Alu 1 292 -20 248 229 29 0 chr17 2803983 2804053 -86700500 - L2 LINE L2 -284 2988 2917 1770 75 4 8 chr17 2804842 2805082 -86699471 - AluSg/x SINE Alu -1 311 73 543 44 0 0 chr17 2805083 2805151 -86699402 - AluY SINE Alu -10 299 232 21 0 0 0 chr17 2805151 2805172 -86699381 + AT_rich Low_complexity Low_complexity 1 21 0 297 0 0 0 chr17 2806374 2806407 -86698146 + (CA)n Simple_repeat Simple_repeat 2 34 0 2252 97 13 7 chr17 2806537 2806846 -86697707 - AluSx SINE Alu -1 311 1 262 130 0 43 chr17 2806847 2806916 -86697637 + (TTTTG)n Simple_repeat Simple_repeat 5 70 0 239 326 61 0 chr17 2808253 2808351 -86696202 - MER91A DNA MER1_type -48 148 45 1881 143 14 10 chr17 2808440 2808734 -86695819 - AluJo SINE Alu -15 297 3 272 326 22 0 chr17 2809376 2809468 -86695085 + L3b LINE CR1 1283 1376 -207 814 246 44 68 chr17 2809981 2810235 -86694318 + MLT1D LTR MaLR 1 245 -260 2511 34 0 0 chr17 2810235 2810528 -86694025 + AluY SINE Alu 1 293 -18 814 246 44 68 chr17 2810528 2810639 -86693914 + MLT1D LTR MaLR 245 357 -148 212 356 0 42 chr17 2811202 2811320 -86693233 + C-rich Low_complexity Low_complexity 2 114 0 754 257 104 47 chr17 2811679 2812123 -86692430 + HAL1b LINE L1 874 1342 -6 723 119 12 226 chr17 2812187 2812207 -86692346 + AluSg/x SINE Alu 118 141 -168 2134 95 10 17 chr17 2812207 2812503 -86692050 + AluSx SINE Alu 1 294 -18 2333 84 3 0 chr17 2812503 2812799 -86691754 + AluSg SINE Alu 1 297 -13 723 119 12 226 chr17 2812799 2813020 -86691533 + AluSg/x SINE Alu 139 308 -1 1194 238 3 40 chr17 2813498 2813821 -86690732 + MLT1A1 LTR MaLR 55 365 0 389 249 136 45 chr17 2813822 2814087 -86690466 + MLT1C LTR MaLR 94 382 -123 415 200 3 114 chr17 2814258 2814339 -86690214 + MLT1C LTR MaLR 349 388 -79 2155 113 0 10 chr17 2814339 2814650 -86689903 + AluSx SINE Alu 1 308 -4 415 200 3 114 chr17 2814650 2814720 -86689833 + MLT1C LTR MaLR 388 464 -3 382 333 85 7 chr17 2815156 2815297 -86689256 - MIR SINE MIR -35 227 76 1175 128 35 62 chr17 2815612 2815838 -86688715 + AluJo SINE Alu 86 305 -7 2379 81 7 0 chr17 2815841 2816150 -86688403 + AluSx SINE Alu 1 311 -1 583 265 24 30 chr17 2816908 2817024 -86687529 - MIR SINE MIR 0 262 146 2712 139 12 21 chr17 2817024 2817384 -86687169 + MSTA LTR MaLR 1 358 -70 2294 105 3 0 chr17 2817384 2817688 -86686865 - AluSg SINE Alu -5 305 1 2712 139 12 21 chr17 2817688 2817759 -86686794 + MSTA LTR MaLR 358 428 0 583 265 24 30 chr17 2817759 2817808 -86686745 - MIR SINE MIR -116 146 98 2102 130 0 0 chr17 2817826 2818118 -86686435 + AluSx SINE Alu 1 292 -20 1026 90 0 0 chr17 2818137 2818270 -86686283 + AluSq/x SINE Alu 1 133 -180 2119 81 4 0 chr17 2818272 2818545 -86686008 + AluSp SINE Alu 1 274 -39 922 191 7 0 chr17 2818646 2818905 -86685648 + L1MA4 LINE L1 5172 5432 -743 * 1106 171 19 0 chr17 2818898 2819108 -86685445 - L1M4 LINE L1 -493 5691 5478 5152 131 30 15 chr17 2819146 2819625 -86684928 + L1MA4 LINE L1 5430 5928 -372 2240 92 16 3 chr17 2819625 2819931 -86684622 + AluSx SINE Alu 1 310 -2 5152 131 30 15 chr17 2819931 2820299 -86684254 + L1MA4 LINE L1 5928 6289 -11 291 228 22 33 chr17 2820394 2820486 -86684067 - L2 LINE L2 -182 3090 3000 247 308 239 0 chr17 2821202 2821319 -86683234 - MIR3 SINE MIR -22 186 42 1430 174 0 8 chr17 2821838 2822085 -86682468 - AluJb SINE Alu -26 286 42 542 333 4 71 chr17 2822203 2822274 -86682279 + MIR SINE MIR 1 75 -187 2084 86 18 0 chr17 2822274 2822573 -86681980 - AluSg SINE Alu 0 304 1 542 333 4 71 chr17 2822573 2822755 -86681798 + MIR SINE MIR 75 238 -24 348 24 0 0 chr17 2823400 2823441 -86681112 + (CA)n Simple_repeat Simple_repeat 1 41 0 214 214 0 0 chr17 2823593 2823635 -86680918 - MIR SINE MIR -110 152 111 367 252 48 0 chr17 2823645 2823748 -86680805 + MIR SINE MIR 81 188 -74 432 323 117 68 chr17 2824420 2824668 -86679885 + MIR SINE MIR 3 262 0 317 314 191 0 chr17 2825052 2825288 -86679265 + MLT1L LTR MaLR 218 498 -117 2152 101 0 13 chr17 2825522 2825820 -86678733 - AluSg SINE Alu -16 294 1 22 0 0 0 chr17 2826330 2826352 -86678201 + AT_rich Low_complexity Low_complexity 1 22 0 544 167 0 0 chr17 2826352 2826436 -86678117 - FLAM_C SINE Alu -25 118 35 2189 92 7 23 chr17 2826503 2826809 -86677744 + AluSx SINE Alu 1 301 -11 1099 194 45 4 chr17 2826901 2827148 -86677405 + MER7A DNA MER2_type 1 255 -91 321 197 58 88 chr17 2827165 2827302 -86677251 + MER7A DNA MER2_type 214 346 0 303 308 121 11 chr17 2827353 2827535 -86677018 - MIR SINE MIR -29 233 32 246 105 0 0 chr17 2827645 2827683 -86676870 + (A)n Simple_repeat Simple_repeat 1 38 0 210 37 0 0 chr17 2828659 2828686 -86675867 + (T)n Simple_repeat Simple_repeat 1 27 0 1369 105 51 39 chr17 2828833 2829090 -86675463 + AluSq SINE Alu 46 305 -8 2354 79 0 19 chr17 2829472 2829790 -86674763 + AluSx SINE Alu 1 312 0 2424 62 7 0 chr17 2830334 2830640 -86673913 - AluSc SINE Alu -1 308 1 400 331 51 11 chr17 2831414 2831589 -86672964 - MIR SINE MIR 0 262 81 213 380 26 9 chr17 2831702 2831815 -86672738 + MIR SINE MIR 23 137 -71 368 302 0 0 chr17 2831934 2832030 -86672523 - L3 LINE CR1 -78 1499 1404 548 330 90 67 chr17 2832865 2833963 -86670590 + L2 LINE L2 2131 3258 -14 2384 75 0 0 chr17 2833967 2834261 -86670292 + AluY SINE Alu 1 294 -17 2310 93 0 10 chr17 2834270 2834581 -86669972 + AluSx SINE Alu 1 308 -4 226 286 88 23 chr17 2835644 2835804 -86668749 - MIR SINE MIR -70 192 23 213 219 109 78 chr17 2835876 2835940 -86668613 + MER5A DNA MER1_type 59 124 -65 209 311 118 37 chr17 2837514 2837675 -86666878 + MIR SINE MIR 65 238 -24 453 203 142 14 chr17 2837827 2837975 -86666578 - MIR3 SINE MIR -15 193 27 2158 112 13 0 chr17 2838439 2838742 -86665811 + AluSg SINE Alu 1 307 -3 2234 104 0 3 chr17 2840451 2840758 -86663795 + AluSx SINE Alu 1 306 -6 270 95 0 0 chr17 2840875 2840917 -86663636 + (TTTTG)n Simple_repeat Simple_repeat 2 43 0 838 127 0 0 chr17 2840917 2841035 -86663518 - FLAM_C SINE Alu -25 118 1 2071 116 30 3 chr17 2842748 2843049 -86661504 - AluSg SINE Alu -1 309 1 509 202 0 0 chr17 2843627 2843721 -86660832 + FRAM SINE Alu 68 161 -15 255 320 0 13 chr17 2843831 2843906 -86660647 - MIR SINE MIR -12 250 177 370 268 183 0 chr17 2844695 2844860 -86659693 - MIR SINE MIR -60 148 6 262 395 0 0 chr17 2844858 2844993 -86659560 + MIR SINE MIR 31 140 -68 * 2202 75 0 4 chr17 2845585 2845864 -86658689 + AluSq SINE Alu 1 278 -35 231 36 0 0 chr17 2845864 2845892 -86658661 + (CAAT)n Simple_repeat Simple_repeat 3 30 0 488 307 84 6 chr17 2846439 2846605 -86657948 + MIR3 SINE MIR 5 183 -25 235 198 88 77 chr17 2846612 2846645 -86657908 + HsTC2 DNA Tc2 1 32 -1866 1692 159 0 36 chr17 2846645 2846947 -86657606 - AluJb SINE Alu -21 291 1 235 198 88 77 chr17 2846947 2847004 -86657549 + HsTC2 DNA Tc2 32 92 -1806 200 59 29 0 chr17 2847092 2847126 -86657427 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 2115 96 0 7 chr17 2847128 2847408 -86657145 - AluSc SINE Alu -31 278 1 609 210 11 81 chr17 2847409 2847465 -86657088 - MIR SINE MIR -65 197 139 2041 101 7 42 chr17 2847465 2847771 -86656782 - AluSg SINE Alu -15 295 1 609 210 11 81 chr17 2847771 2847900 -86656653 - MIR SINE MIR -123 139 25 223 279 29 0 chr17 2847909 2847977 -86656576 + GA-rich Low_complexity Low_complexity 5 74 0 232 271 0 0 chr17 2847979 2848027 -86656526 - L2 LINE L2 -15 3257 3210 226 165 0 196 chr17 2848157 2848254 -86656299 - L1M3 LINE L1 -653 5527 5450 2346 89 0 0 chr17 2848259 2848562 -86655991 - AluY SINE Alu -8 303 1 1557 110 0 13 chr17 2848562 2848736 -86655817 - AluSg/x SINE Alu -5 307 135 2056 125 0 3 chr17 2848736 2849032 -86655521 - AluSg SINE Alu -15 295 1 1557 110 0 13 chr17 2849032 2849084 -86655469 - AluSg/x SINE Alu -177 135 84 299 295 19 38 chr17 2849270 2849375 -86655178 + L2 LINE L2 3208 3310 -3 226 286 29 0 chr17 2849966 2850036 -86654517 + CT-rich Low_complexity Low_complexity 1 72 0 306 350 0 8 chr17 2850795 2850812 -86653741 + MIR SINE MIR 22 38 -224 2285 95 0 3 chr17 2850812 2851116 -86653437 - AluSx SINE Alu -9 303 1 306 350 0 8 chr17 2851116 2851215 -86653338 + MIR SINE MIR 38 137 -125 207 273 82 45 chr17 2851330 2851440 -86653113 - L2 LINE L2 -12 3301 3188 2421 65 3 3 chr17 2851464 2851773 -86652780 - AluSg SINE Alu 0 310 2 243 0 0 0 chr17 2852578 2852605 -86651948 + (TG)n Simple_repeat Simple_repeat 2 28 0 2270 103 0 0 chr17 2852614 2852914 -86651639 - AluSx SINE Alu -12 300 1 23 33 0 0 chr17 2852919 2852949 -86651604 + AT_rich Low_complexity Low_complexity 1 30 0 807 222 5 31 chr17 2853294 2853488 -86651065 + MIR SINE MIR 47 235 -27 1830 138 46 0 chr17 2853517 2853800 -86650753 - AluSx SINE Alu -16 296 1 2284 85 3 3 chr17 2853820 2854115 -86650438 - AluSq SINE Alu -16 297 3 2114 126 3 0 chr17 2854115 2854416 -86650137 - AluSx SINE Alu -10 302 1 4337 163 29 12 chr17 2854577 2855084 -86649469 - L1MA5 LINE L1 -4 6296 5770 1989 113 12 41 chr17 2855084 2855404 -86649149 - AluSx SINE Alu -1 311 1 4337 163 29 12 chr17 2855404 2855653 -86648900 - L1MA5 LINE L1 -530 5770 5527 2151 93 0 17 chr17 2856123 2856296 -86648257 - AluSx SINE Alu -10 302 135 249 108 0 0 chr17 2856296 2856333 -86648220 + (TA)n Simple_repeat Simple_repeat 2 38 0 2151 93 0 17 chr17 2856333 2856460 -86648093 - AluSx SINE Alu -177 135 7 468 175 34 73 chr17 2857098 2857123 -86647430 - HAL1 LINE L1 -335 2172 2148 2453 62 0 7 chr17 2857123 2857428 -86647125 - AluY SINE Alu -8 303 1 468 175 34 73 chr17 2857428 2857579 -86646974 - HAL1 LINE L1 -359 2148 2003 1833 174 23 0 chr17 2857579 2857883 -86646670 - AluJo SINE Alu -1 311 1 1132 224 74 55 chr17 2858044 2858253 -86646300 - HAL1 LINE L1 -809 1698 1494 2349 96 0 3 chr17 2858253 2858566 -86645987 - AluSx SINE Alu 0 312 1 1132 224 74 55 chr17 2858566 2858776 -86645777 - HAL1 LINE L1 -1013 1494 1271 681 277 49 71 chr17 2858783 2859291 -86645262 - MLT1G LTR MaLR -51 539 38 263 229 169 0 chr17 2859326 2859444 -86645109 - HAL1 LINE L1 -1254 1253 1116 2266 83 0 40 chr17 2859457 2859783 -86644770 - AluSq SINE Alu 0 313 1 251 253 12 24 chr17 2859783 2859866 -86644687 - HAL1 LINE L1 -2425 82 1 906 101 0 0 chr17 2860450 2860569 -86643984 + AluSq/x SINE Alu 15 133 -179 2069 114 0 26 chr17 2860582 2860888 -86643665 + AluSx SINE Alu 1 298 -14 364 270 9 18 chr17 2861521 2861632 -86642921 + MER113 DNA MER1_type? 84 193 -328 627 288 83 0 chr17 2861778 2861983 -86642570 + MIR SINE MIR 2 223 -39 2239 82 0 3 chr17 2862028 2862320 -86642233 - AluSx SINE Alu -21 291 1 242 322 42 17 chr17 2862857 2862975 -86641578 + MIR SINE MIR 20 140 -68 2197 116 0 3 chr17 2863497 2863808 -86640745 + AluSq SINE Alu 1 310 -3 1534 102 204 8 chr17 2863857 2864102 -86640451 - AluSg1 SINE Alu -16 293 1 1980 130 31 0 chr17 2864362 2864654 -86639899 - AluJb SINE Alu -11 301 1 461 293 140 0 chr17 2865216 2865373 -86639180 - MIR SINE MIR -26 236 58 948 212 9 4 chr17 2865387 2865617 -86638936 - L1MB7 LINE L1 -158 6026 5801 2108 73 3 28 chr17 2865635 2865953 -86638600 - AluY SINE Alu 0 311 1 2074 114 3 3 chr17 2865955 2866245 -86638308 - AluSx SINE Alu -14 298 9 22 35 0 0 chr17 2866254 2866283 -86638270 + AT_rich Low_complexity Low_complexity 1 29 0 547 236 0 0 chr17 2866283 2866410 -86638143 - L1MB7 LINE L1 -355 5829 5703 180 0 0 0 chr17 2866807 2866827 -86637726 + (CAT)n Simple_repeat Simple_repeat 2 21 0 23 0 0 0 chr17 2866869 2866892 -86637661 + AT_rich Low_complexity Low_complexity 1 23 0 2283 76 0 0 chr17 2866894 2867184 -86637369 - AluSq SINE Alu -23 290 1 431 228 60 54 chr17 2867207 2867356 -86637197 - MIR SINE MIR -103 159 10 880 241 55 8 chr17 2868380 2868637 -86635916 - MLT1C LTR MaLR 0 467 199 2156 116 0 7 chr17 2868660 2868961 -86635592 - AluSx SINE Alu -13 299 1 354 45 0 0 chr17 2870973 2871017 -86633536 + (TG)n Simple_repeat Simple_repeat 1 44 0 590 249 133 0 chr17 2871100 2871265 -86633288 - MER5A DNA MER1_type -2 187 1 2222 97 0 3 chr17 2871325 2871625 -86632928 - AluSq SINE Alu -14 299 1 240 86 0 0 chr17 2872526 2872561 -86631992 + (TCCC)n Simple_repeat Simple_repeat 3 37 0 1375 254 178 6 chr17 2873292 2873793 -86630760 - MLT1K LTR MaLR 0 588 2 431 263 9 171 chr17 2873797 2874143 -86630410 - L2 LINE L2 -25 3247 2958 519 301 75 0 chr17 2874148 2874255 -86630298 + MER5A DNA MER1_type 4 130 -59 2278 75 3 0 chr17 2874255 2874548 -86630005 - AluSg SINE Alu -16 294 1 519 301 75 0 chr17 2874548 2874613 -86629940 + MER5A DNA MER1_type 130 189 0 754 311 179 19 chr17 2874667 2875171 -86629382 - L2 LINE L2 -410 2904 2482 1507 187 33 0 chr17 2875171 2875444 -86629109 - AluJo SINE Alu -25 287 6 754 311 179 19 chr17 2875444 2875678 -86628875 - L2 LINE L2 -832 2482 2048 216 0 0 0 chr17 2925860 2925884 -86578669 + (TGGGGG)n Simple_repeat Simple_repeat 1 24 0 747 196 32 31 chr17 2926235 2926543 -86578010 + MER31B LTR ERV1 1 390 -76 415 185 25 0 chr17 2926516 2926597 -86577956 + MER67D LTR ERV1 432 514 0 * 519 208 68 59 chr17 2926724 2926926 -86577627 - LTR16B LTR ERVL -17 447 241 2501 65 0 0 chr17 2926926 2927235 -86577318 + AluSg1 SINE Alu 1 309 0 519 208 68 59 chr17 2927235 2927268 -86577285 - LTR16B LTR ERVL -223 241 210 1551 202 91 142 chr17 2928158 2928941 -86575612 + LTR41 LTR ERVL 25 767 -6 2511 112 10 8 chr17 2929511 2929896 -86574657 - L1PB3 LINE L1 0 6154 5769 5912 53 21 7 chr17 2929896 2930652 -86573901 - L1PA7 LINE L1 -1 6153 5387 1423 225 209 23 chr17 2930659 2931299 -86573254 - HAL1 LINE L1 -296 2211 1453 377 306 70 32 chr17 2931634 2931863 -86572690 - L1M4 LINE L1 -1458 4688 4469 2138 105 0 0 chr17 2931863 2932158 -86572395 - AluSx SINE Alu -17 295 1 377 306 70 32 chr17 2932158 2932434 -86572119 - L1M4 LINE L1 -1677 4469 4164 329 296 141 68 chr17 2932531 2932913 -86571640 - L1M4 LINE L1 -1832 4314 3905 2024 81 7 20 chr17 2934742 2935038 -86569515 - AluSx SINE Alu -20 292 1 285 29 0 0 chr17 2935487 2935521 -86569032 + (TG)n Simple_repeat Simple_repeat 1 34 0 350 253 24 12 chr17 2935915 2935998 -86568555 - L2 LINE L2 -2 3311 3228 216 357 104 25 chr17 2936117 2936397 -86568156 + L2 LINE L2 2511 2812 -502 790 273 52 26 chr17 2936421 2936688 -86567865 + LTR16A LTR ERVL 9 282 -168 1123 193 73 46 chr17 2936688 2937051 -86567502 + MLT1A1 LTR MaLR 1 396 0 257 300 115 8 chr17 2937074 2937204 -86567349 + LTR16A LTR ERVL 307 450 0 1702 190 34 58 chr17 2937614 2937729 -86566824 - L1M2 LINE L1 -583 5708 5592 1601 174 0 17 chr17 2937729 2938023 -86566530 - AluJb SINE Alu -22 290 2 1702 190 34 58 chr17 2938023 2938776 -86565777 - L1M2 LINE L1 -699 5592 4314 * 4597 141 42 21 chr17 2938753 2939746 -86564807 - L1PA16 LINE L1 0 6166 5123 2178 168 13 2 chr17 2939734 2940127 -86564426 - L1M2 LINE L1 -1945 4201 3805 * 1369 280 24 53 chr17 2940217 2940712 -86563841 - L1M3f LINE L1 -4752 598 99 1345 125 5 5 chr17 2940712 2940920 -86563633 - L1PA10 LINE L1 -15 6153 5946 1369 280 24 53 chr17 2940920 2941017 -86563536 - L1M3f LINE L1 -5251 99 1 21 0 0 0 chr17 2941028 2941049 -86563504 + AT_rich Low_complexity Low_complexity 1 21 0 1274 176 75 80 chr17 2941088 2941464 -86563089 + MLT1A2 LTR MaLR 1 374 0 189 107 0 0 chr17 2941561 2941589 -86562964 + (T)n Simple_repeat Simple_repeat 1 28 0 1521 120 4 41 chr17 2941617 2942568 -86561985 - L1PB1 LINE L1 0 6151 5236 304 284 197 0 chr17 2942719 2942846 -86561707 + MIR SINE MIR 41 192 -70 24 0 0 0 chr17 2944059 2944083 -86560470 + AT_rich Low_complexity Low_complexity 1 24 0 3516 195 127 11 chr17 2944283 2945340 -86559213 - Charlie1 DNA MER1_type -1 2760 1582 430 284 75 50 chr17 2945351 2946163 -86558390 - L1M4 LINE L1 -2212 3934 3103 494 148 10 0 chr17 2948537 2948638 -86555915 - L1PA16 LINE L1 0 6166 6065 311 330 165 21 chr17 2948643 2948831 -86555722 + MIR SINE MIR 47 261 -1 22 70 0 0 chr17 2949380 2949423 -86555130 + AT_rich Low_complexity Low_complexity 1 43 0 267 295 93 49 chr17 2949543 2949726 -86554827 - L2 LINE L2 -288 3025 2835 1689 194 0 0 chr17 2950167 2950461 -86554092 - AluJo SINE Alu -18 294 1 1870 152 3 3 chr17 2950493 2950783 -86553770 + AluJb SINE Alu 1 290 -22 1942 130 0 0 chr17 2951071 2951348 -86553205 - AluSx SINE Alu -21 291 15 21 36 0 0 chr17 2951358 2951386 -86553167 + AT_rich Low_complexity Low_complexity 1 28 0 13067 133 19 13 chr17 2951397 2953660 -86550893 - Tigger1 DNA MER2_type 0 2418 142 619 257 79 3 chr17 2953677 2953992 -86550561 + L1M4 LINE L1 2637 2975 -3171 850 88 0 0 chr17 2954006 2954131 -86550422 + L1PBa LINE L1 1 125 -6738 268 300 73 27 chr17 2954601 2954711 -86549842 + L2 LINE L2 3138 3252 -20 25 0 0 0 chr17 2955021 2955046 -86549507 + AT_rich Low_complexity Low_complexity 1 25 0 2063 127 7 0 chr17 2955046 2955338 -86549215 - AluSx SINE Alu -18 294 1 182 352 56 28 chr17 2956190 2956332 -86548221 + L3 LINE CR1 1420 1565 -12 219 272 124 53 chr17 2956916 2957085 -86547468 + MER5A DNA MER1_type 9 189 0 328 305 37 0 chr17 2957456 2957620 -86546933 - L1M4 LINE L1 -1034 5348 5179 351 324 101 47 chr17 2958281 2958559 -86545994 + L1MEd LINE L1 571 863 -5256 1177 261 109 49 chr17 2958573 2959384 -86545169 - L1ME3A LINE L1 -73 6097 5195 567 88 0 0 chr17 2959384 2959464 -86545089 + MADE1 DNA Mariner 1 80 0 1177 261 109 49 chr17 2959464 2959805 -86544748 - L1ME3A LINE L1 -975 5195 4876 1298 176 53 68 chr17 2959817 2960041 -86544512 - L1MA9 LINE L1 0 6312 6086 1661 197 0 7 chr17 2960041 2960330 -86544223 + AluJo SINE Alu 1 287 -25 180 0 0 0 chr17 2960330 2960350 -86544203 + (CCA)n Simple_repeat Simple_repeat 1 20 0 1298 176 53 68 chr17 2960350 2960504 -86544049 - L1MA9 LINE L1 -224 6088 5939 2297 149 96 2 chr17 2960520 2960997 -86543556 - L1MA2 LINE L1 0 6304 5783 6278 219 53 30 chr17 2961022 2961170 -86543383 - L1M1 LINE L1 -1822 5743 5600 2176 62 0 0 chr17 2961170 2961446 -86543107 - L1PA7 LINE L1 0 6154 5879 6278 219 53 30 chr17 2961446 2963240 -86541313 - L1M1 LINE L1 -1965 5600 3850 1546 173 66 36 chr17 2963240 2963604 -86540949 - THE1C LTR MaLR 0 375 1 8711 134 50 42 chr17 2963609 2965174 -86539379 - MSTA-int LTR MaLR 0 1580 3 1651 156 186 14 chr17 2965176 2965541 -86539012 - MSTA LTR MaLR 0 428 1 6278 219 53 30 chr17 2965541 2965791 -86538762 - L1M1 LINE L1 -3718 3847 3489 503 250 15 7 chr17 2965818 2965954 -86538599 - L1M4 LINE L1 -5861 452 316 917 174 15 55 chr17 2966010 2966211 -86538342 - AluJo SINE Alu 0 312 120 239 227 0 0 chr17 2966232 2966298 -86538255 - L1M1 LINE L1 -4185 3380 3315 4037 263 26 59 chr17 2966371 2967831 -86536722 - L1M1 LINE L1 -4868 2628 1217 3372 88 24 41 chr17 2967855 2968204 -86536349 - L1PB1 LINE L1 -1 6150 5812 180 0 0 0 chr17 2968204 2968224 -86536329 + (TG)n Simple_repeat Simple_repeat 2 21 0 3372 88 24 41 chr17 2968224 2968409 -86536144 - L1PB1 LINE L1 -339 5812 5625 336 293 198 6 chr17 3069561 3069728 -86434825 + MIR SINE MIR 64 262 0 2134 248 44 113 chr17 3070597 3072543 -86432010 + L1M4c LINE L1 739 2584 -3798 781 143 0 9 chr17 3072543 3072655 -86431898 + FLAM_C SINE Alu 11 121 -22 2134 248 44 113 chr17 3072655 3073121 -86431432 + L1M4c LINE L1 2584 3080 -3302 452 202 0 0 chr17 3073190 3073292 -86431261 - L1P LINE L1 -2736 3410 3309 1130 165 20 5 chr17 3073305 3073505 -86431048 + L1 LINE L1 4282 4484 -1898 20353 153 16 18 chr17 3073505 3074616 -86429937 + L1P3 LINE L1 208 1320 -5141 207 0 0 0 chr17 3074616 3074639 -86429914 + (CAA)n Simple_repeat Simple_repeat 2 24 0 20353 153 16 18 chr17 3074639 3077987 -86426566 + L1P3 LINE L1 1320 4721 -1740 904 128 61 4 chr17 3077964 3078130 -86426423 + L1MA4 LINE L1 6438 6606 -20 * 292 337 98 0 chr17 3078565 3078728 -86425825 - MIR SINE MIR -78 184 6 1113 144 17 0 chr17 3079285 3079458 -86425095 - AluSg/x SINE Alu 0 312 137 215 339 83 9 chr17 3079791 3079900 -86424653 + MIR SINE MIR 19 135 -73 222 237 17 17 chr17 3080071 3080130 -86424423 + GA-rich Low_complexity Low_complexity 5 63 0 2147 121 3 3 chr17 3080639 3080946 -86423607 + AluSx SINE Alu 1 307 -5 2360 245 91 29 chr17 3081365 3081976 -86422577 - L1ME3A LINE L1 -69 6170 5598 3305 184 59 3 chr17 3081976 3082617 -86421936 - L1MA4 LINE L1 0 6300 5624 2360 245 91 29 chr17 3082617 3083274 -86421279 - L1ME3A LINE L1 -641 5598 4817 1973 127 52 14 chr17 3083318 3083609 -86420944 - AluSx SINE Alu -10 302 1 1366 173 8 25 chr17 3083609 3083852 -86420701 + MLT1A1 LTR MaLR 127 365 0 663 292 97 23 chr17 3083881 3084501 -86420052 - L1ME3A LINE L1 -4921 1475 810 1821 166 0 0 chr17 3085389 3085673 -86418880 + AluSx SINE Alu 6 289 -23 461 385 48 20 chr17 3085904 3086299 -86418254 + L2 LINE L2 2572 2977 -337 2123 114 23 0 chr17 3086654 3086953 -86417600 + AluSx SINE Alu 1 306 -6 2426 120 61 79 chr17 3087535 3087907 -86416646 + Tigger2a DNA MER2_type 1 365 -2343 8945 25 16 246 chr17 3087907 3089700 -86414853 - SVA Other Other -5 1381 2 2426 120 61 79 chr17 3089700 3089769 -86414784 + Tigger2a DNA MER2_type 365 434 0 215 306 0 59 chr17 3089860 3089945 -86414608 - MIR SINE MIR -61 147 68 2312 107 0 0 chr17 3090286 3090586 -86413967 - AluSq SINE Alu -13 300 1 229 297 54 0 chr17 3090903 3090977 -86413576 - L2 LINE L2 -13 3300 3223 700 306 207 35 chr17 3091130 3091340 -86413213 - L2 LINE L2 -407 2907 2734 2471 80 0 6 chr17 3091340 3091654 -86412899 - AluSx SINE Alu 0 312 1 700 306 207 35 chr17 3091654 3092337 -86412216 - L2 LINE L2 -580 2734 1860 2009 129 14 0 chr17 3093733 3094028 -86410525 - AluSx SINE Alu -13 299 1 392 284 204 35 chr17 3094308 3094426 -86410127 - MIR SINE MIR -3 259 162 2224 112 0 0 chr17 3094426 3094744 -86409809 + AluSx SINE Alu 1 318 0 392 284 204 35 chr17 3094744 3094825 -86409728 - MIR SINE MIR -100 162 25 609 303 83 30 chr17 3095008 3095404 -86409149 - Charlie8 DNA MER1_type -27 2390 1974 2392 33 25 0 chr17 3095410 3095726 -86408827 - L1PA5 LINE L1 0 6154 5862 389 185 188 55 chr17 3095739 3095770 -86408783 + Zaphod DNA AcHobo 568 594 -3437 2385 81 0 3 chr17 3095770 3096067 -86408486 - AluSq SINE Alu -17 296 1 389 185 188 55 chr17 3096067 3096360 -86408193 + Zaphod DNA AcHobo 594 935 -3096 846 102 18 13 chr17 3096414 3096552 -86408001 - L1PA8 LINE L1 -6 6162 6022 * 9784 167 60 98 chr17 3096541 3097689 -86406864 - L1 LINE L1 -960 5186 3996 840 257 6 6 chr17 3097689 3097868 -86406685 + MER8 DNA MER2_type 1 179 -60 328 270 0 0 chr17 3097843 3097906 -86406647 + MER2 DNA MER2_type 282 344 -1 * 9784 167 60 98 chr17 3097906 3099259 -86405294 - L1 LINE L1 -2188 3958 2572 1882 134 7 37 chr17 3099484 3099783 -86404770 + AluSx SINE Alu 6 295 -17 2482 170 29 56 chr17 3100256 3100414 -86404139 + MER70A LTR ERVL 1 162 -310 2293 67 0 7 chr17 3100414 3100697 -86403856 + L1PA8 LINE L1 5892 6172 0 2482 170 29 56 chr17 3100697 3101021 -86403532 + MER70A LTR ERVL 162 470 -2 398 249 203 23 chr17 3101122 3101299 -86403254 - MIR SINE MIR -51 211 3 211 391 78 5 chr17 3101679 3101871 -86402682 - L2 LINE L2 -510 2804 2599 374 216 0 0 chr17 3103704 3103778 -86400775 + MER116 DNA Mariner 3 76 -4 479 312 53 70 chr17 3104085 3104441 -86400112 + L2 LINE L2 2431 2780 -534 524 310 114 63 chr17 3104489 3104902 -86399651 + L2 LINE L2 2817 3250 -22 1947 120 3 50 chr17 3105028 3105329 -86399224 - AluSx SINE Alu -25 287 1 2125 119 0 29 chr17 3105645 3105956 -86398597 - AluSx SINE Alu -10 302 1 312 287 111 59 chr17 3106049 3106394 -86398159 + L1M4 LINE L1 4799 5168 -978 2855 40 69 3 chr17 3106394 3106740 -86397813 + L1PA3 LINE L1 5787 6155 0 312 287 111 59 chr17 3106740 3106781 -86397772 + L1M4 LINE L1 5168 5205 -941 209 338 40 0 chr17 3106901 3106975 -86397578 - MIR SINE MIR -166 96 20 1853 133 0 58 chr17 3107209 3107518 -86397035 - AluSx SINE Alu -16 296 6 574 55 0 0 chr17 3108983 3109056 -86395497 + Alu SINE Alu 2 74 -236 937 201 26 0 chr17 3159095 3159284 -86345269 + MLT1A1 LTR MaLR 171 364 -1 188 395 18 30 chr17 3159285 3159452 -86345101 + L2 LINE L2 2475 2639 -675 712 202 40 0 chr17 3159512 3159685 -86344868 - L1MA4 LINE L1 -4 6296 6117 728 325 41 14 chr17 3159740 3160085 -86344468 + L2 LINE L2 2077 2430 -884 757 231 78 0 chr17 3160106 3160362 -86344191 + MLT1A1 LTR MaLR 2 277 -88 1984 114 7 37 chr17 3161962 3162260 -86342293 - AluSq SINE Alu -24 289 1 2275 169 19 2 chr17 3162260 3162679 -86341874 - L1MA5 LINE L1 -258 6042 5617 348 273 69 18 chr17 3162688 3163021 -86341532 - L1 LINE L1 -1593 4553 4204 462 154 22 0 chr17 3163125 3163216 -86341337 + L1ME2 LINE L1 5880 5972 -192 613 158 0 0 chr17 3163266 3163361 -86341192 - AluS SINE Alu -217 95 1 445 281 31 23 chr17 3163374 3163634 -86340919 - L1 LINE L1 -2145 4001 3740 1866 119 43 12 chr17 3163945 3164273 -86340280 - L1MA4 LINE L1 -6 6294 5957 685 325 31 7 chr17 3164784 3165199 -86339354 - HAL1b LINE L1 -703 645 221 585 147 9 0 chr17 3166642 3166751 -86337802 - L1MA9 LINE L1 -349 5963 5854 680 145 69 19 chr17 3166754 3166913 -86337640 + L1MA7 LINE L1 6124 6290 -1 1732 65 24 116 chr17 3166979 3167271 -86337282 - AluYb8 SINE Alu -8 310 46 1144 73 0 0 chr17 3167271 3167407 -86337146 - AluSq/x SINE Alu -177 136 1 662 162 9 0 chr17 3167437 3167582 -86336971 + AluSg/x SINE Alu 182 327 0 1026 70 7 0 chr17 3167637 3167791 -86336762 - L1P4 LINE L1 -489 5672 5512 10249 170 5 13 chr17 3167851 3169884 -86334669 + L1P LINE L1 2976 4992 -1154 1462 241 48 95 chr17 3169880 3170308 -86334245 + L1M4 LINE L1 4098 4545 -1601 * 6380 73 18 14 chr17 3170308 3171719 -86332834 + L1PA10 LINE L1 4724 6168 0 1462 241 48 95 chr17 3171719 3172081 -86332472 + L1M4 LINE L1 4545 4923 -1223 351 0 0 0 chr17 3172081 3172120 -86332433 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 680 13 0 0 chr17 3172120 3172199 -86332354 - L1PA2 LINE L1 -11 6144 6066 1462 241 48 95 chr17 3172199 3172370 -86332183 + L1M4 LINE L1 4921 5015 -1131 313 349 50 26 chr17 3172595 3173051 -86331502 + MERVL LTR ERVL 4867 5333 -152 951 60 51 31 chr17 3174292 3174614 -86329939 + (TCTA)n Simple_repeat Simple_repeat 1 328 0 1566 172 23 10 chr17 3174632 3174940 -86329613 - MLT2D LTR ERVL -48 366 55 3340 55 23 5 chr17 3174940 3175380 -86329173 + L1PA8 LINE L1 5725 6172 0 851 347 90 53 chr17 3175788 3176808 -86327745 - L2 LINE L2 -11 3261 2200 2141 136 10 7 chr17 3176808 3177300 -86327253 - AluSx SINE Alu 0 312 1 851 347 90 53 chr17 3177300 3177561 -86326992 - L2 LINE L2 -1072 2200 1950 22 0 0 0 chr17 3179048 3179070 -86325483 + AT_rich Low_complexity Low_complexity 1 22 0 1937 168 0 3 chr17 3179070 3179380 -86325173 - AluJo SINE Alu -3 309 1 1890 112 12 0 chr17 3179390 3179668 -86324885 - AluSg SINE Alu 0 310 28 2409 84 3 0 chr17 3180016 3180324 -86324229 + AluY SINE Alu 1 309 -2 1026 70 7 0 chr17 3180564 3180718 -86323835 + L1P3 LINE L1 5512 5672 -489 288 0 0 0 chr17 3180773 3180805 -86323748 + (TTA)n Simple_repeat Simple_repeat 2 33 0 1807 99 3 127 chr17 3180807 3181139 -86323414 - AluSx SINE Alu -17 295 5 384 349 34 19 chr17 3181164 3181433 -86323120 + L2 LINE L2 2174 2446 -868 286 187 0 27 chr17 3181889 3181964 -86322589 + L1M4 LINE L1 4577 4649 -1497 26 0 0 0 chr17 3182314 3182340 -86322213 + AT_rich Low_complexity Low_complexity 1 26 0 27 0 0 0 chr17 3182508 3182535 -86322018 + AT_rich Low_complexity Low_complexity 1 27 0 350 273 53 17 chr17 3182605 3182773 -86321780 + L1M4 LINE L1 5197 5367 -779 2034 145 0 0 chr17 3182823 3183159 -86321394 + AluSx SINE Alu 1 336 0 976 233 44 28 chr17 3183271 3183708 -86320845 - L1ME2 LINE L1 -88 6076 4829 913 42 42 0 chr17 3183708 3183827 -86320726 - L1PA13 LINE L1 -3 6160 6037 379 226 24 24 chr17 3183837 3183969 -86320584 - L1ME1 LINE L1 -339 5827 5701 547 83 42 0 chr17 3184011 3184107 -86320446 - L1PA13 LINE L1 -121 6042 5943 * 3348 170 16 12 chr17 3184096 3184768 -86319785 + L1P LINE L1 4324 4998 -1148 254 169 113 0 chr17 3184748 3184819 -86319734 - L1ME2 LINE L1 -1285 4861 4783 * 318 281 39 59 chr17 3185087 3185290 -86319263 - HAL1b LINE L1 -654 694 496 29 70 0 0 chr17 3185655 3185712 -86318841 + AT_rich Low_complexity Low_complexity 1 57 0 305 212 42 76 chr17 3185967 3186085 -86318468 - L1MC4 LINE L1 -138 7904 7791 2296 240 83 11 chr17 3186773 3187519 -86317034 - L1ME2 LINE L1 0 6164 5365 2166 110 7 10 chr17 3187776 3188077 -86316476 - AluSx SINE Alu -12 300 1 324 352 83 26 chr17 3188095 3188359 -86316194 + L1ME3 LINE L1 5688 5966 -196 1985 118 3 20 chr17 3188653 3188958 -86315595 + AluSx SINE Alu 1 300 -12 612 206 168 29 chr17 3190479 3190688 -86313865 + MIR SINE MIR 7 244 -18 234 82 68 41 chr17 3190694 3190767 -86313786 + (TCTA)n Simple_repeat Simple_repeat 2 76 0 26 0 0 0 chr17 3190992 3191018 -86313535 + AT_rich Low_complexity Low_complexity 1 26 0 2394 59 3 20 chr17 3191386 3191692 -86312861 - AluY SINE Alu -10 301 1 195 25 75 25 chr17 3191824 3191864 -86312689 + A-rich Low_complexity Low_complexity 4 45 0 526 253 126 16 chr17 3192096 3192278 -86312275 + L2 LINE L2 3112 3313 0 653 232 41 5 chr17 3193623 3193817 -86310736 + L1MA9 LINE L1 6073 6273 -39 1942 127 22 0 chr17 3193974 3194250 -86310303 + AluSx SINE Alu 1 310 0 253 0 0 0 chr17 3194250 3194278 -86310275 + (CAAAA)n Simple_repeat Simple_repeat 3 65 0 2614 37 0 3 chr17 3194736 3195034 -86309519 - AluY SINE Alu -14 297 1 529 213 7 85 chr17 3195583 3195698 -86308855 + MER5B DNA MER1_type 10 114 -64 2497 57 0 7 chr17 3195698 3195995 -86308558 - AluSc SINE Alu -13 296 2 529 213 7 85 chr17 3195995 3196020 -86308533 + MER5B DNA MER1_type 114 139 -39 631 239 6 44 chr17 3196284 3196443 -86308110 - MER5B DNA MER1_type -20 158 6 1983 99 32 7 chr17 3196597 3196879 -86307674 + AluY SINE Alu 1 289 -22 202 337 22 11 chr17 3197030 3197119 -86307434 + L3 LINE CR1 1483 1572 -5 269 94 47 16 chr17 3197446 3197510 -86307043 + CT-rich Low_complexity Low_complexity 1 66 0 2353 91 3 0 chr17 3197691 3197988 -86306565 - AluSp SINE Alu -15 298 1 348 275 69 30 chr17 3199777 3199908 -86304645 + MIR SINE MIR 61 196 -66 1829 171 7 3 chr17 3199970 3200275 -86304278 + AluJb SINE Alu 1 306 -6 7402 54 30 0 chr17 3200381 3201541 -86303012 - L1PA7 LINE L1 0 6154 4991 268 171 184 40 chr17 3201541 3201617 -86302936 + MLT1E2 LTR MaLR 3 89 -537 419 192 0 7 chr17 3201618 3201721 -86302832 - L1PB4 LINE L1 -68 6086 5987 * 758 213 11 32 chr17 3201712 3201900 -86302653 - L1PB4 LINE L1 -35 6121 5938 * 1238 227 64 24 chr17 3201894 3202269 -86302284 - L1ME LINE L1 -5230 840 451 28 0 0 0 chr17 3202327 3202355 -86302198 + AT_rich Low_complexity Low_complexity 1 28 0 264 100 0 0 chr17 3202710 3202750 -86301803 + (A)n Simple_repeat Simple_repeat 1 40 0 300 258 16 0 chr17 3202784 3202846 -86301707 + Tigger3(Golem) DNA MER2_type 1 63 -2966 855 127 19 83 chr17 3202859 3203016 -86301537 + Tigger3(Golem) DNA MER2_type 2882 3028 -1 525 259 77 79 chr17 3203017 3203458 -86301095 + L1ME LINE L1 5379 5818 -303 237 98 0 0 chr17 3203550 3203591 -86300962 + (TG)n Simple_repeat Simple_repeat 2 42 0 184 79 79 0 chr17 3205600 3205638 -86298915 + T-rich Low_complexity Low_complexity 2 42 0 3472 83 7 2 chr17 3208151 3208596 -86295957 + L1PA10 LINE L1 5722 6168 0 22 0 0 0 chr17 3208633 3208655 -86295898 + AT_rich Low_complexity Low_complexity 1 22 0 770 286 64 75 chr17 3208884 3209707 -86294846 + HAL1b LINE L1 98 911 -437 308 246 16 82 chr17 3209752 3209874 -86294679 + HAL1b LINE L1 794 907 -441 441 293 145 40 chr17 3210521 3210920 -86293633 + L1M4 LINE L1 2680 3120 -3026 187 318 118 0 chr17 3213030 3213115 -86291438 + MIR SINE MIR 58 152 -56 415 301 34 0 chr17 3214202 3214348 -86290205 + MIR SINE MIR 64 214 -48 462 316 7 0 chr17 3214419 3214555 -86289998 - MIR SINE MIR -75 187 51 2271 107 0 0 chr17 3214742 3215040 -86289513 + AluSx SINE Alu 1 298 -14 7933 40 5 0 chr17 3215154 3216352 -86288201 - L1PA5 LINE L1 0 6154 4957 5004 36 24 36 chr17 3216352 3217010 -86287543 + L1PA5 LINE L1 4309 4958 -1188 336 278 128 0 chr17 3217006 3217139 -86287414 + L1ME2 LINE L1 5511 5660 -502 * 494 332 80 27 chr17 3217395 3217922 -86286631 + L1M4 LINE L1 4733 5287 -859 2229 118 0 16 chr17 3217924 3218230 -86286323 + AluSc SINE Alu 1 301 -8 1070 106 0 0 chr17 3218238 3218379 -86286174 + AluSg/x SINE Alu 154 294 -18 248 70 23 0 chr17 3218382 3218425 -86286128 + (TA)n Simple_repeat Simple_repeat 2 45 0 204 120 40 20 chr17 3218442 3218492 -86286061 + (TA)n Simple_repeat Simple_repeat 1 51 0 893 247 151 49 chr17 3218576 3219107 -86285446 - L1MEc LINE L1 -5781 615 31 1475 224 71 6 chr17 3219256 3219608 -86284945 + L1ME2 LINE L1 5769 6143 -21 299 248 78 43 chr17 3220325 3220466 -86284087 + L2 LINE L2 3168 3313 0 1562 182 36 0 chr17 3220634 3220914 -86283639 - AluJo SINE Alu -22 290 1 236 331 88 11 chr17 3222963 3223144 -86281409 - L2 LINE L2 -791 2523 2329 2253 95 0 0 chr17 3223375 3223685 -86280868 - AluSx SINE Alu 0 310 1 2087 126 3 0 chr17 3227110 3227404 -86277149 - AluSx SINE Alu -17 295 1 227 390 70 0 chr17 3228244 3228344 -86276209 + L2 LINE L2 3141 3247 -25 23 68 0 0 chr17 3228846 3228890 -86275663 + AT_rich Low_complexity Low_complexity 1 44 0 5927 139 30 0 chr17 3229169 3230182 -86274371 - L1PA16 LINE L1 -3 6163 5131 192 226 274 0 chr17 3231133 3231195 -86273358 - MIR SINE MIR -107 155 77 511 262 16 40 chr17 3231957 3232155 -86272398 + MIR SINE MIR 10 200 -54 318 258 262 40 chr17 3233153 3233428 -86271125 - L1MC/D LINE L1 -496 5625 5408 369 221 26 0 chr17 3233717 3233794 -86270759 - MER58 DNA MER1_type -1 2419 2341 33 0 0 0 chr17 3233803 3233836 -86270717 + AT_rich Low_complexity Low_complexity 1 33 0 39276 38 5 1 chr17 3233839 3239319 -86265234 - L1PA4 LINE L1 0 6155 656 373 286 117 35 chr17 3239354 3239637 -86264916 - L1MC/D LINE L1 -896 5250 4945 2338 102 0 3 chr17 3239670 3239973 -86264580 - AluSx SINE Alu -10 302 1 262 114 0 0 chr17 3240160 3240195 -86264358 + U2 snRNA snRNA 1 35 -153 4224 99 11 0 chr17 3240240 3240794 -86263759 - L1PA11 LINE L1 0 6174 5615 441 127 0 0 chr17 3240796 3240867 -86263686 + L1P4 LINE L1 5017 5087 -1059 1198 28 0 14 chr17 3240868 3241010 -86263543 + MER11A LTR ERVK 1 140 -1126 13748 31 1 0 chr17 3241018 3243332 -86261221 - L1PA2 LINE L1 -2 6153 3838 22201 40 24 2 chr17 3243333 3247186 -86257367 - L1P LINE L1 -2157 3989 2 4256 127 30 33 chr17 3247186 3248155 -86256398 + MER11A LTR ERVK 119 1266 0 2796 85 3 2 chr17 3248155 3248692 -86255861 + L1P4 LINE L1 5083 5619 -549 266 161 107 0 chr17 3248684 3248740 -86255813 - L1MB4 LINE L1 -36 6144 6083 * 1393 144 21 20 chr17 3248712 3248992 -86255561 - L1MA4 LINE L1 -243 6054 5772 409 290 38 8 chr17 3249111 3249242 -86255311 - L1M4 LINE L1 -1533 4613 4479 331 345 98 0 chr17 3249480 3249674 -86254879 - L1MB4 LINE L1 -2341 5467 5255 22 35 0 0 chr17 3249970 3249999 -86254554 + AT_rich Low_complexity Low_complexity 1 29 0 312 244 35 35 chr17 3250123 3250209 -86254344 - MIR SINE MIR -53 209 124 760 129 23 0 chr17 3251595 3251727 -86252826 - L1MB3 LINE L1 -2 6181 6047 39333 81 12 7 chr17 3251742 3257854 -86246699 - L1PA5 LINE L1 -8 6146 12 334 235 81 78 chr17 3258591 3258617 -86245936 + MLT1K LTR MaLR 32 56 -532 2083 196 112 39 chr17 3258617 3259128 -86245425 + LTR55 LTR ERV 1 548 0 334 235 81 78 chr17 3259128 3259337 -86245216 + MLT1K LTR MaLR 56 298 -290 370 244 0 0 chr17 3259396 3259478 -86245075 - MLT1K LTR MaLR -138 450 369 955 261 127 54 chr17 3259647 3260409 -86244144 + HAL1 LINE L1 637 1454 -1053 243 284 26 32 chr17 3260464 3260587 -86243966 + L1ME LINE L1 3 126 -5944 714 99 18 9 chr17 3260606 3260717 -86243836 - L1MA7 LINE L1 -409 5882 5771 642 137 10 0 chr17 3260717 3260819 -86243734 - L1MA2 LINE L1 0 6304 6202 230 265 0 44 chr17 3260821 3260889 -86243664 + MLT1K LTR MaLR 217 281 -307 4334 116 22 22 chr17 3260966 3261655 -86242898 - L1MA2 LINE L1 -107 6197 5509 434 37 0 0 chr17 3261657 3261711 -86242842 - L1MA2 LINE L1 -895 5407 5354 8101 32 0 0 chr17 3261711 3262854 -86241699 - L1PA3 LINE L1 0 6155 5013 30731 35 1 0 chr17 3262854 3266511 -86238042 + L1PA3 LINE L1 1344 5001 -1145 8039 195 31 83 chr17 3266513 3268141 -86236412 - L1 LINE L1 -783 6782 5072 1843 106 44 7 chr17 3268141 3268414 -86236139 - L1MA1 LINE L1 0 6302 6020 8039 195 31 83 chr17 3268414 3268778 -86235775 - L1 LINE L1 -2493 5072 4691 489 211 11 0 chr17 3268778 3268868 -86235685 - AluJb SINE Alu -11 301 211 8039 195 31 83 chr17 3268868 3269895 -86234658 - L1 LINE L1 -2874 4691 3970 261 0 0 0 chr17 3269895 3269924 -86234629 + (TC)n Simple_repeat Simple_repeat 2 30 0 8039 195 31 83 chr17 3269924 3270954 -86233599 - L1 LINE L1 -3595 3970 2889 316 167 11 67 chr17 3270969 3271059 -86233494 + L1M4 LINE L1 3398 3482 -2664 258 274 49 55 chr17 3271863 3272027 -86232526 + L1MC1 LINE L1 5837 5999 -334 * 1495 149 15 8 chr17 3271909 3272171 -86232382 + L1MB3 LINE L1 5881 6144 -39 811 152 0 30 chr17 3272176 3272308 -86232245 - AluJo SINE Alu -176 136 9 322 302 0 0 chr17 3272601 3272707 -86231846 + L1M4 LINE L1 3465 3570 -2576 6734 206 9 7 chr17 3272712 3274156 -86230397 - L1P LINE L1 -2972 3174 1728 * 20845 40 1 1 chr17 3274151 3277163 -86227390 - L1PA5 LINE L1 -271 5883 2870 6280 142 21 16 chr17 3277139 3278146 -86226407 - MSTA-int LTR MaLR -566 1014 3 * 1961 143 178 22 chr17 3278148 3278518 -86226035 - MSTA LTR MaLR 0 428 1 1813 153 54 15 chr17 3278680 3279014 -86225539 - L1MA7 LINE L1 0 6291 5945 1950 134 62 3 chr17 3279014 3279321 -86225232 + L1M2 LINE L1 5434 5758 -533 429 287 71 71 chr17 3279932 3280214 -86224339 - MLT1I LTR MaLR 0 409 128 254 216 67 97 chr17 3280272 3280406 -86224147 - LTR67 LTR ERVL -17 540 411 312 333 8 17 chr17 3281342 3281462 -86223091 - MLT1L LTR MaLR -355 260 142 192 233 0 0 chr17 3281619 3281662 -86222891 + MIR SINE MIR 61 103 -159 10899 198 44 79 chr17 3281678 3282051 -86222502 - L1PB2 LINE L1 -2 6865 6481 225 232 0 0 chr17 3282051 3282107 -86222446 + LTR66 LTR ERVL 398 453 -157 10899 198 44 79 chr17 3282107 3284274 -86220279 - L1PB2 LINE L1 -386 6481 4241 1981 141 7 3 chr17 3284274 3284573 -86219980 - AluJb SINE Alu -12 300 1 10899 198 44 79 chr17 3284573 3285105 -86219448 - L1PB2 LINE L1 -2626 4241 3692 6207 60 21 57 chr17 3285105 3287289 -86217264 - SVA Other Other -518 1379 54 875 34 26 0 chr17 3287289 3287406 -86217147 + (GGGAGA)n Simple_repeat Simple_repeat 4 123 0 10899 198 44 79 chr17 3287406 3289210 -86215343 - L1PB2 LINE L1 -3174 3693 1828 2268 96 0 0 chr17 3289210 3289503 -86215050 - L1PB1 LINE L1 -1 6150 5858 10899 198 44 79 chr17 3289503 3289657 -86214896 - L1PB2 LINE L1 -5039 1828 1670 320 77 39 0 chr17 3289657 3289709 -86214844 - Alu SINE Alu 0 302 249 10899 198 44 79 chr17 3289709 3289801 -86214752 - L1PB2 LINE L1 -5197 1670 1576 2070 139 10 0 chr17 3289801 3290104 -86214449 - AluSx SINE Alu -6 306 1 10899 198 44 79 chr17 3290104 3291760 -86212793 - L1PB2 LINE L1 -5291 1576 1 409 275 107 0 chr17 3291772 3291903 -86212650 + MIR SINE MIR 117 261 -1 980 244 14 3 chr17 3292217 3292470 -86212083 + L1ME LINE L1 5419 5669 -493 2410 187 120 21 chr17 3292539 3293192 -86211361 - MER52A LTR ERV1 -955 800 4 313 294 24 0 chr17 3293439 3293524 -86211029 - MIR3 SINE MIR -45 163 77 21 0 0 0 chr17 3295817 3295838 -86208715 + AT_rich Low_complexity Low_complexity 1 21 0 200 261 58 0 chr17 3296118 3296187 -86208366 - MIR SINE MIR -93 169 97 297 303 42 34 chr17 3296229 3296348 -86208205 + L2 LINE L2 2953 3072 -200 246 312 21 64 chr17 3297181 3297322 -86207231 + L2 LINE L2 2933 3067 -205 656 292 88 22 chr17 3297539 3297813 -86206740 + L3 LINE CR1 1137 1428 -149 414 258 207 23 chr17 3297857 3298075 -86206478 - MIR SINE MIR -6 256 3 34 84 0 0 chr17 3298409 3298492 -86206061 + AT_rich Low_complexity Low_complexity 1 83 0 967 193 63 19 chr17 3299145 3299352 -86205201 + MER58A DNA MER1_type 1 216 -8 2359 59 3 11 chr17 3299353 3299663 -86204890 + AluSp SINE Alu 1 308 0 244 118 55 47 chr17 3299813 3299940 -86204613 + (TAGA)n Simple_repeat Simple_repeat 1 128 0 606 206 168 29 chr17 3299946 3300155 -86204398 - MIR SINE MIR -18 244 7 21 0 0 0 chr17 3301062 3301083 -86203470 + GC_rich Low_complexity Low_complexity 1 21 0 1992 118 3 20 chr17 3301677 3301982 -86202571 - AluSx SINE Alu -12 300 1 2253 106 0 10 chr17 3302558 3302861 -86201692 + AluSx SINE Alu 1 300 -12 2594 241 92 13 chr17 3303073 3303864 -86200689 + L1ME2 LINE L1 5311 6164 0 263 212 42 76 chr17 3304552 3304670 -86199883 + L1MC4 LINE L1 7791 7904 -138 29 70 0 0 chr17 3304925 3304982 -86199571 + AT_rich Low_complexity Low_complexity 1 57 0 373 267 81 59 chr17 3305332 3305568 -86198985 + HAL1b LINE L1 476 716 -632 288 169 113 0 chr17 3305818 3305889 -86198664 + L1ME2 LINE L1 4783 4861 -1285 * 3658 164 19 15 chr17 3305869 3306541 -86198012 - L1P LINE L1 -1148 4998 4324 584 118 43 14 chr17 3306530 3306661 -86197892 + L1PA13 LINE L1 5943 6072 -93 * 435 225 78 35 chr17 3306668 3306810 -86197743 + L1ME2 LINE L1 5701 5848 -316 980 42 42 0 chr17 3306810 3306929 -86197624 + L1PA13 LINE L1 6037 6160 -3 1128 227 50 35 chr17 3306929 3307366 -86197187 + L1ME2 LINE L1 4829 6076 -88 2022 145 0 0 chr17 3307478 3307814 -86196739 - AluSx SINE Alu 0 336 1 342 273 53 17 chr17 3307864 3308032 -86196521 - L1M4 LINE L1 -779 5367 5197 27 0 0 0 chr17 3308102 3308129 -86196424 + AT_rich Low_complexity Low_complexity 1 27 0 26 0 0 0 chr17 3308297 3308323 -86196230 + AT_rich Low_complexity Low_complexity 1 26 0 282 274 88 49 chr17 3308442 3308748 -86195805 - L1M4 LINE L1 -1252 4894 4577 378 346 34 19 chr17 3309204 3309473 -86195080 - L2 LINE L2 -868 2446 2174 1811 99 3 127 chr17 3309498 3309861 -86194692 + AluSx SINE Alu 5 326 0 1100 70 7 0 chr17 3309916 3310070 -86194483 - L1P4 LINE L1 -489 5672 5512 2430 81 3 0 chr17 3310310 3310618 -86193935 - AluY SINE Alu -2 309 1 1887 112 12 0 chr17 3310966 3311244 -86193309 + AluSg SINE Alu 28 310 0 1918 168 0 3 chr17 3311254 3311564 -86192989 + AluJo SINE Alu 1 309 -3 22 0 0 0 chr17 3311564 3311586 -86192967 + AT_rich Low_complexity Low_complexity 1 22 0 736 339 85 60 chr17 3313073 3313334 -86191219 + L2 LINE L2 1950 2203 -1069 2122 136 10 7 chr17 3313334 3313826 -86190727 + AluSx SINE Alu 1 312 0 736 339 85 60 chr17 3313826 3314850 -86189703 + L2 LINE L2 2203 3261 -11 3574 55 23 5 chr17 3315258 3315698 -86188855 - L1PA8 LINE L1 0 6172 5725 1705 172 23 10 chr17 3315698 3316006 -86188547 + MLT2D LTR ERVL 55 366 -48 951 60 51 31 chr17 3316024 3316346 -86188207 + (TAGA)n Simple_repeat Simple_repeat 1 328 0 1894 242 53 84 chr17 3318268 3318423 -86186130 - L1M4 LINE L1 -1131 5015 4857 728 53 21 21 chr17 3318423 3318557 -86185996 + L1PA2 LINE L1 6050 6183 0 1894 242 53 84 chr17 3318557 3318919 -86185634 - L1M4 LINE L1 -1289 4857 4485 6859 73 63 0 chr17 3318919 3320330 -86184223 - L1PA10 LINE L1 0 6168 4724 1894 242 53 84 chr17 3320330 3320758 -86183795 - L1M4 LINE L1 -1661 4485 4098 * 11904 172 7 18 chr17 3320754 3322813 -86181740 - L1P LINE L1 -1154 4992 2957 2046 115 11 3 chr17 3322813 3323099 -86181454 - AluSx SINE Alu -22 290 3 11904 172 7 18 chr17 3323099 3323257 -86181296 - L1P LINE L1 -3189 2957 2799 969 134 15 0 chr17 3323754 3323888 -86180665 + AluJo SINE Alu 1 136 -176 300 179 0 0 chr17 3323892 3323948 -86180605 - L1P LINE L1 -2085 4061 4006 778 156 170 7 chr17 3323967 3324102 -86180451 + AluJo SINE Alu 134 290 -22 246 62 0 0 chr17 3324357 3324389 -86180164 + (TG)n Simple_repeat Simple_repeat 1 32 0 2303 86 3 0 chr17 3324613 3324904 -86179649 - AluSp SINE Alu -21 292 1 349 270 79 53 chr17 3325292 3325444 -86179109 - MIR SINE MIR -43 219 64 1957 83 0 30 chr17 3325932 3326198 -86178355 + AluY SINE Alu 49 306 -5 251 273 13 0 chr17 3327686 3327763 -86176790 + GA-rich Low_complexity Low_complexity 1 78 0 2322 86 3 29 chr17 3328033 3328347 -86176206 + AluSg SINE Alu 5 310 0 191 269 30 30 chr17 3328358 3328425 -86176128 - L3 LINE CR1 -28 1549 1483 2249 82 0 7 chr17 3328576 3328867 -86175686 - AluY SINE Alu -22 289 1 260 192 39 0 chr17 3328872 3328924 -86175629 + MER5B DNA MER1_type 125 178 0 24 53 0 0 chr17 3329379 3329417 -86175136 + AT_rich Low_complexity Low_complexity 1 38 0 2452 88 0 0 chr17 3329775 3330083 -86174470 + AluSq SINE Alu 1 308 -5 546 253 67 108 chr17 3330089 3330295 -86174258 - L1M4 LINE L1 -1945 4201 3988 378 0 0 0 chr17 3330295 3330337 -86174216 + (TTA)n Simple_repeat Simple_repeat 2 43 0 1775 144 0 11 chr17 3330342 3330605 -86173948 - AluSx SINE Alu -52 260 1 546 253 67 108 chr17 3330605 3330883 -86173670 - L1M4 LINE L1 -2162 3984 3731 2033 119 43 12 chr17 3331189 3331517 -86173036 - L1MA4 LINE L1 -6 6294 5957 797 318 41 11 chr17 3332014 3332454 -86172099 - HAL1b LINE L1 -689 659 207 634 147 9 0 chr17 3333886 3333995 -86170558 - L1MA9 LINE L1 -349 5963 5854 764 145 69 19 chr17 3333998 3334157 -86170396 + L1MA7 LINE L1 6124 6290 -1 2138 63 21 102 chr17 3334223 3334558 -86169995 - AluYb8 SINE Alu -8 310 3 772 223 36 72 chr17 3334608 3334859 -86169694 - L1MA9 LINE L1 -5 6286 6045 568 250 96 14 chr17 3336183 3336391 -86168162 - L2 LINE L2 0 3313 3089 269 297 48 41 chr17 3337556 3337701 -86166852 + MIR3 SINE MIR 31 176 -32 2318 93 0 37 chr17 3338144 3338467 -86166086 + AluSq SINE Alu 1 311 -2 369 301 41 67 chr17 3338622 3338967 -86165586 - L1ME LINE L1 -303 5818 5483 33 66 0 0 chr17 3339017 3339078 -86165475 + AT_rich Low_complexity Low_complexity 1 61 0 320 304 112 0 chr17 3339086 3339211 -86165342 - MIR SINE MIR -12 250 112 362 52 86 35 chr17 3339313 3339371 -86165182 - L1PA15 LINE L1 -3 6162 6102 4979 100 4 1 chr17 3339414 3340093 -86164460 - L1PA13 LINE L1 -49 6114 5434 12220 90 9 0 chr17 3340096 3341668 -86162885 - HERVL LTR ERVL -3328 2326 740 5767 87 10 33 chr17 3341673 3342158 -86162395 + L1PA10 LINE L1 5361 5821 -347 2086 101 11 0 chr17 3342158 3342436 -86162117 - AluSx SINE Alu -22 290 10 5767 87 10 33 chr17 3342436 3342774 -86161779 + L1PA10 LINE L1 5821 6165 -3 * 11353 163 41 18 chr17 3342756 3346042 -86158511 + L1MA5 LINE L1 2929 6290 -10 5138 30 0 0 chr17 3346269 3346866 -86157687 + L1PA3 LINE L1 5556 6152 -3 30 27 0 0 chr17 3347093 3347130 -86157423 + AT_rich Low_complexity Low_complexity 1 37 0 1214 330 96 53 chr17 3348517 3349230 -86155323 + L2 LINE L2 1907 2587 -685 2576 58 0 0 chr17 3349230 3349539 -86155014 - AluY SINE Alu -2 309 1 1214 330 96 53 chr17 3349539 3349835 -86154718 + L2 LINE L2 2587 2869 -403 2474 74 7 3 chr17 3349835 3350145 -86154408 - AluY SINE Alu 0 311 1 1214 330 96 53 chr17 3350145 3350430 -86154123 + L2 LINE L2 2869 3261 -11 2285 99 0 3 chr17 3350465 3350768 -86153785 - AluSp SINE Alu -11 302 1 521 207 131 77 chr17 3351512 3351709 -86152844 - MER5A DNA MER1_type 0 189 14 310 263 153 25 chr17 3351732 3351850 -86152703 + MER5B DNA MER1_type 46 178 0 211 365 22 62 chr17 3352430 3352704 -86151849 - L2 LINE L2 -358 2956 2694 627 301 10 5 chr17 3353195 3353401 -86151152 - ERVL LTR ERVL -617 5147 4941 585 305 10 5 chr17 3353944 3354141 -86150412 - ERVL LTR ERVL -858 4906 4709 327 280 11 21 chr17 3354152 3354245 -86150308 + L2 LINE L2 3221 3312 -1 383 321 18 14 chr17 3354247 3354468 -86150085 - L1M4 LINE L1 -2004 4142 3921 2724 239 65 21 chr17 3355615 3356661 -86147892 + L1ME3A LINE L1 5088 6165 -5 198 200 0 0 chr17 3356720 3356760 -86147793 - L2 LINE L2 -13 3300 3261 * 465 322 83 10 chr17 3356726 3356931 -86147622 - MIR SINE MIR -13 249 30 471 351 40 68 chr17 3357096 3357523 -86147030 + L2 LINE L2 2832 3246 -26 181 206 0 0 chr17 3357493 3357527 -86147026 + MIR SINE MIR 213 246 -16 * 262 284 11 34 chr17 3358141 3358229 -86146324 + MIR3 SINE MIR 14 99 -109 974 182 34 62 chr17 3358251 3358542 -86146011 - L1MA9 LINE L1 -38 6274 5992 193 391 11 11 chr17 3358542 3358634 -86145919 + MIR SINE MIR 91 182 -80 337 215 126 22 chr17 3359066 3359201 -86145352 + MLT1K LTR MaLR 374 522 -66 809 200 12 0 chr17 3359971 3360136 -86144417 + MLT1E2 LTR MaLR 460 626 0 192 158 0 0 chr17 3360287 3360325 -86144228 + (TA)n Simple_repeat Simple_repeat 1 38 0 1163 154 72 16 chr17 3360351 3360779 -86143774 - MLT1D LTR MaLR 0 505 10 268 226 19 0 chr17 3360774 3360827 -86143726 - MLT1D LTR MaLR -451 54 1 * 186 43 0 0 chr17 3361336 3361359 -86143194 + (TTCA)n Simple_repeat Simple_repeat 3 25 0 496 299 102 39 chr17 3361475 3361729 -86142824 - L2 LINE L2 0 3313 3044 314 289 136 34 chr17 3362143 3362481 -86142072 - LTR33 LTR ERVL -130 393 22 188 384 89 7 chr17 3362583 3362729 -86141824 - L2 LINE L2 -352 2962 2805 901 188 41 64 chr17 3362758 3362976 -86141577 + MER58A DNA MER1_type 12 224 0 350 262 108 8 chr17 3363794 3363946 -86140607 - MIR SINE MIR -58 150 25 1958 157 3 3 chr17 3364356 3364656 -86139897 - AluJb SINE Alu -12 300 1 695 187 251 12 chr17 3364779 3365030 -86139523 - MER69 DNA AcHobo 0 2526 2216 518 200 20 0 chr17 3365046 3365146 -86139407 - AluJo SINE Alu -90 222 121 433 162 27 18 chr17 3365146 3365257 -86139296 - MER69 DNA AcHobo -314 2212 2101 1524 134 4 0 chr17 3365274 3365513 -86139040 - Tigger1 DNA MER2_type -2177 241 2 5437 219 51 73 chr17 3365520 3366171 -86138382 + L1M4c LINE L1 2420 3084 -3298 2374 97 0 10 chr17 3366171 3366481 -86138072 + AluSc SINE Alu 2 308 -1 5437 219 51 73 chr17 3366481 3366815 -86137738 + L1M4c LINE L1 3084 3424 -2958 2382 80 3 0 chr17 3366815 3367114 -86137439 + AluSc SINE Alu 1 300 -9 5437 219 51 73 chr17 3367114 3368133 -86136420 + L1M4c LINE L1 3424 4355 -2027 1215 190 31 0 chr17 3368133 3368359 -86136194 + MER46A DNA MER2_type 1 233 -3 5437 219 51 73 chr17 3368359 3368780 -86135773 + L1M4c LINE L1 4355 4784 -1598 8994 20 6 0 chr17 3368803 3370627 -86133926 - L1PA3 LINE L1 0 6155 4325 11481 133 91 5 chr17 3370627 3373064 -86131489 + L1MA9 LINE L1 3065 5800 -512 2065 100 16 53 chr17 3373064 3373384 -86131169 + AluSq SINE Alu 1 308 -5 11481 133 91 5 chr17 3373384 3373908 -86130645 + L1MA9 LINE L1 5800 6278 -34 2154 113 0 7 chr17 3373920 3374211 -86130342 - AluSx SINE Alu -23 289 1 22 56 0 0 chr17 3374445 3374481 -86130072 + AT_rich Low_complexity Low_complexity 1 36 0 300 291 38 13 chr17 3374711 3374790 -86129763 - MIR3 SINE MIR -30 178 98 1980 162 0 19 chr17 3375012 3375327 -86129226 + AluJo SINE Alu 3 311 -1 848 121 86 17 chr17 3375590 3375764 -86128789 - MER53 DNA DNA -1 188 3 22 88 0 0 chr17 3376120 3376177 -86128376 + AT_rich Low_complexity Low_complexity 1 57 0 301 256 44 0 chr17 3376219 3376309 -86128244 + MIR SINE MIR 132 225 -37 217 316 0 13 chr17 3376894 3376970 -86127583 + GA-rich Low_complexity Low_complexity 2 76 0 3327 152 34 7 chr17 3377724 3378310 -86126243 - MER7C DNA MER2_type 0 602 1 189 74 0 0 chr17 3378314 3378341 -86126212 + (CTATT)n Simple_repeat Simple_repeat 4 30 0 201 143 0 0 chr17 3378413 3378448 -86126105 + (TCTCCC)n Simple_repeat Simple_repeat 4 38 0 494 316 124 0 chr17 3379287 3379496 -86125057 + MIR SINE MIR 21 255 -7 233 229 114 14 chr17 3379487 3379557 -86124996 - MIR SINE MIR -95 113 37 * 267 303 55 9 chr17 3379937 3380046 -86124507 - L2 LINE L2 -25 3247 3134 23 0 0 0 chr17 3380591 3380614 -86123939 + AT_rich Low_complexity Low_complexity 1 23 0 967 193 32 32 chr17 3380669 3380740 -86123813 - L1MB7 LINE L1 -1 6183 6113 2388 87 3 3 chr17 3380740 3381052 -86123501 - AluSq SINE Alu -1 312 1 967 193 32 32 chr17 3381052 3381229 -86123324 - L1MB7 LINE L1 -70 6114 5935 302 231 102 54 chr17 3381253 3381400 -86123153 - L1MB7 LINE L1 -367 5754 5601 994 251 39 7 chr17 3382230 3382694 -86121859 - LTR33 LTR ERVL -3 518 1 1798 89 20 16 chr17 3382756 3383076 -86121477 + AluSq SINE Alu 39 359 0 271 290 0 81 chr17 3383557 3383681 -86120872 - MIR SINE MIR -115 147 34 785 178 53 0 chr17 3385329 3385481 -86119072 + LTR45B LTR ERV1 3 162 -327 2151 102 3 7 chr17 3385482 3385785 -86118768 - AluY SINE Alu -9 302 1 896 59 0 0 chr17 3385786 3385888 -86118665 - AluSq/x SINE Alu -177 136 35 1042 130 35 130 chr17 3385891 3386206 -86118347 + LTR12 LTR ERV1 1 285 -429 234 237 0 0 chr17 3386206 3386265 -86118288 + LTR30 LTR ERV1 552 610 -112 710 185 39 0 chr17 3386269 3386399 -86118154 + LTR12 LTR ERV1 349 483 -231 366 121 0 15 chr17 3386795 3386861 -86117692 - MSTA LTR MaLR -363 65 1 1071 262 111 25 chr17 3386895 3387338 -86117215 + MLT1E LTR MaLR 1 481 -112 427 135 34 149 chr17 3387329 3387401 -86117152 + Charlie5 DNA MER1_type 2334 2382 -242 * 2234 114 3 0 chr17 3387401 3387707 -86116846 + AluSc SINE Alu 1 307 -2 427 135 34 149 chr17 3387707 3387782 -86116771 + Charlie5 DNA MER1_type 2382 2464 -160 702 149 54 0 chr17 3387840 3387988 -86116565 + Charlie5 DNA MER1_type 2469 2624 0 488 248 74 0 chr17 3388499 3388648 -86115905 + MER105 DNA DNA 3 162 -42 230 171 0 0 chr17 3388647 3388688 -86115865 - MER105 DNA DNA -162 42 2 * 2890 194 41 68 chr17 3388908 3389466 -86115087 + L1MCa LINE L1 7 283 -5624 2112 132 0 3 chr17 3389466 3389762 -86114791 - AluSq SINE Alu -18 295 1 2890 194 41 68 chr17 3389762 3390519 -86114034 + L1MCa LINE L1 283 1058 -4849 1812 175 29 14 chr17 3390563 3390911 -86113642 + MLT1A1 LTR MaLR 13 365 0 1407 186 49 16 chr17 3390911 3391369 -86113184 + L1MCa LINE L1 1087 1530 -4896 1388 180 34 3 chr17 3391376 3391671 -86112882 + L1MA9 LINE L1 6009 6312 0 330 322 51 73 chr17 3391676 3391949 -86112604 + L1MC/D LINE L1 5433 5699 -2109 7857 31 0 0 chr17 3391949 3392923 -86111630 - L1PA2 LINE L1 -1786 4360 3387 8849 23 1 0 chr17 3392923 3394730 -86109823 + L1PA2 LINE L1 4346 6153 -2 1118 28 0 14 chr17 3394738 3394880 -86109673 - MER11A LTR ERVK -1126 140 1 430 141 0 0 chr17 3394881 3394959 -86109594 - L1P LINE L1 -1059 5087 5010 3934 99 11 0 chr17 3394959 3395508 -86109045 + L1PA11 LINE L1 5615 6174 0 244 114 0 0 chr17 3395553 3395588 -86108965 - U2 snRNA snRNA -153 35 1 6992 61 17 54 chr17 3395877 3397525 -86107028 + SVA Other Other 200 1383 -3 199 319 121 17 chr17 3397547 3397663 -86106890 - L3 LINE CR1 -48 1529 1402 1047 190 121 6 chr17 3398361 3398655 -86105898 - MLT1A1 LTR MaLR 0 374 4 313 344 15 8 chr17 3399706 3399837 -86104716 - MER5A DNA MER1_type -3 186 55 245 236 0 132 chr17 3400212 3400318 -86104235 + MIR SINE MIR 28 119 -143 666 272 112 4 chr17 3400334 3400566 -86103987 + MIR SINE MIR 6 262 0 261 307 59 20 chr17 3400785 3400886 -86103667 + MIR SINE MIR 17 121 -87 1924 70 4 0 chr17 3401602 3401843 -86102710 + AluSq SINE Alu 64 305 -8 2443 63 0 7 chr17 3402195 3402498 -86102055 + AluY SINE Alu 1 301 -10 2227 87 0 0 chr17 3402600 3402876 -86101677 + AluSx SINE Alu 1 276 -36 242 114 0 23 chr17 3402888 3402932 -86101621 + (GGGA)n Simple_repeat Simple_repeat 2 44 0 180 0 0 0 chr17 3402934 3402954 -86101599 + (GGAAA)n Simple_repeat Simple_repeat 1 20 0 211 255 268 33 chr17 3404169 3404322 -86100231 + MIR SINE MIR 74 262 0 197 298 21 53 chr17 3404679 3404773 -86099780 + L3 LINE CR1 1279 1369 -208 22 56 0 0 chr17 3404819 3404855 -86099698 + AT_rich Low_complexity Low_complexity 1 36 0 2261 86 11 0 chr17 3405218 3405522 -86099031 - AluSq SINE Alu 0 308 2 194 314 80 51 chr17 3406585 3406760 -86097793 + MIR SINE MIR 17 196 -66 2304 65 0 0 chr17 3408635 3408911 -86095642 + AluY SINE Alu 35 310 -1 2439 68 0 10 chr17 3409328 3409623 -86094930 + AluY SINE Alu 1 292 -19 309 361 90 25 chr17 3410192 3410547 -86094006 + L2 LINE L2 2369 2746 -568 487 255 64 43 chr17 3410834 3411022 -86093531 - MLT1J LTR MaLR -13 498 307 1748 172 0 33 chr17 3411540 3411620 -86092933 + AluJo SINE Alu 1 82 -230 4191 118 25 67 chr17 3411620 3412341 -86092212 - LTR8 LTR ERV1 0 691 1 1748 172 0 33 chr17 3412341 3412563 -86091990 + AluJo SINE Alu 82 293 -19 230 333 65 38 chr17 3413930 3414116 -86090437 + MIR SINE MIR 46 236 -26 24 0 0 0 chr17 3414196 3414220 -86090333 + AT_rich Low_complexity Low_complexity 1 24 0 1356 37 0 0 chr17 3414220 3414381 -86090172 - L1PA4 LINE L1 -3 6152 5992 2001 133 27 3 chr17 3415082 3415383 -86089170 - AluSx SINE Alu -4 308 1 263 268 89 8 chr17 3415516 3415639 -86088914 + L2 LINE L2 2927 3059 -213 346 282 110 6 chr17 3415670 3415833 -86088720 - L2 LINE L2 -7 3306 3127 498 217 59 12 chr17 3415997 3416242 -86088311 - MER5C DNA MER1_type -1 323 9 1854 149 35 0 chr17 3416445 3416734 -86087819 - AluJo SINE Alu -10 302 4 869 94 0 0 chr17 3416845 3416962 -86087591 + AluSp/q SINE Alu 188 304 -9 1570 236 52 11 chr17 3417110 3417362 -86087191 - LTR40b LTR ERVL 0 462 183 2514 70 0 3 chr17 3417362 3417661 -86086892 - AluSq SINE Alu -15 298 1 1570 236 52 11 chr17 3417661 3417852 -86086701 - LTR40b LTR ERVL -279 183 1 23 33 0 0 chr17 3418166 3418196 -86086357 + AT_rich Low_complexity Low_complexity 1 30 0 339 65 0 0 chr17 3418468 3418514 -86086039 + (TG)n Simple_repeat Simple_repeat 1 46 0 404 282 126 11 chr17 3419117 3419291 -86085262 - MLT1L LTR MaLR -413 202 9 2189 131 0 0 chr17 3419802 3420108 -86084445 + AluSx SINE Alu 1 306 -6 784 228 84 60 chr17 3420984 3421410 -86083143 + L1MC2 LINE L1 5344 5776 -737 348 195 133 9 chr17 3421684 3421797 -86082756 + L1MC2 LINE L1 6218 6344 0 423 369 51 6 chr17 3422402 3422716 -86081837 + L3 LINE CR1 520 847 -730 285 360 55 6 chr17 3422720 3422884 -86081669 + L3 LINE CR1 1012 1183 -394 2174 127 7 3 chr17 3422892 3423200 -86081353 + AluSx SINE Alu 1 309 -3 222 314 59 39 chr17 3423211 3423295 -86081258 + L3 LINE CR1 1280 1370 -207 2040 153 3 0 chr17 3423295 3423603 -86080950 - AluJo SINE Alu -2 310 2 222 314 59 39 chr17 3423603 3423671 -86080882 + L3 LINE CR1 1370 1435 -142 870 257 91 103 chr17 3423888 3424414 -86080139 + MLT1H LTR MaLR 30 549 0 203 138 0 0 chr17 3424971 3425000 -86079553 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1822 98 124 0 chr17 3425034 3425300 -86079253 - AluSq SINE Alu -14 299 1 195 274 59 88 chr17 3426259 3426361 -86078192 - MER5B DNA MER1_type -4 174 76 2398 97 0 0 chr17 3426553 3426863 -86077690 - AluSg SINE Alu 0 310 1 597 269 187 35 chr17 3427171 3427577 -86076976 - L2 LINE L2 -1 3312 2845 377 214 79 84 chr17 3427719 3427781 -86076772 - MER5B DNA MER1_type -1 177 116 2270 84 10 3 chr17 3427781 3428077 -86076476 + AluY SINE Alu 1 298 -13 377 214 79 84 chr17 3428077 3428192 -86076361 - MER5B DNA MER1_type -62 116 1 312 197 46 99 chr17 3428367 3428519 -86076034 + L1ME1 LINE L1 6005 6148 -18 323 260 55 87 chr17 3428533 3428660 -86075893 - MER5B DNA MER1_type -49 129 7 294 272 0 0 chr17 3428730 3428811 -86075742 - MER5A DNA MER1_type -80 109 29 * 315 235 202 8 chr17 3428807 3428926 -86075627 + MER5A DNA MER1_type 48 189 0 1910 147 7 10 chr17 3429344 3429644 -86074909 - AluJo SINE Alu -13 299 1 299 291 86 0 chr17 3430126 3430243 -86074310 + L2 LINE L2 3187 3313 0 13983 123 48 44 chr17 3430404 3431500 -86073053 + Tigger1 DNA MER2_type 11 1101 -1317 2476 67 0 7 chr17 3431500 3431800 -86072753 - AluY SINE Alu -13 298 1 13983 123 48 44 chr17 3431800 3432665 -86071888 + Tigger1 DNA MER2_type 1101 1986 -432 2149 121 0 7 chr17 3432665 3432971 -86071582 + AluSx SINE Alu 1 304 -8 13983 123 48 44 chr17 3432971 3433406 -86071147 + Tigger1 DNA MER2_type 1986 2418 0 267 31 0 0 chr17 3434199 3434231 -86070322 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 538 231 8 45 chr17 3434788 3434922 -86069631 + MIR SINE MIR 121 249 -13 2330 108 0 3 chr17 3435541 3435855 -86068698 - AluSp SINE Alu 0 313 1 295 367 72 4 chr17 3435882 3436119 -86068434 + L2 LINE L2 2724 2976 -338 278 284 102 31 chr17 3436270 3436397 -86068156 + L2 LINE L2 3176 3311 -2 2367 104 0 0 chr17 3436746 3437054 -86067499 - AluSx SINE Alu -4 308 1 2014 125 0 3 chr17 3437675 3437964 -86066589 + AluSx SINE Alu 22 309 -3 258 105 0 0 chr17 3437985 3438023 -86066530 + (GGGA)n Simple_repeat Simple_repeat 4 41 0 269 298 21 0 chr17 3438793 3438887 -86065666 + L1ME LINE L1 5558 5653 -468 6550 24 0 0 chr17 3439162 3439910 -86064643 + L1PA3 LINE L1 5408 6155 0 6941 55 17 0 chr17 3440214 3441181 -86063372 - L1PA8A LINE L1 -4 6127 5163 199 281 74 37 chr17 3442389 3442524 -86062029 + MIR3 SINE MIR 8 147 -61 222 235 224 20 chr17 3443033 3443131 -86061422 - L3 LINE CR1 -13 1564 1447 25 31 0 0 chr17 3445043 3445075 -86059478 + AT_rich Low_complexity Low_complexity 1 32 0 2413 103 0 0 chr17 3445095 3445406 -86059147 - AluSq SINE Alu -2 311 1 373 233 60 17 chr17 3445460 3445576 -86058977 - MIR3 SINE MIR -6 202 82 2011 111 49 0 chr17 3446406 3446694 -86057859 + AluSq SINE Alu 1 302 -11 2427 97 3 0 chr17 3446932 3447241 -86057312 + AluSq SINE Alu 1 310 -3 1093 88 0 0 chr17 3447754 3447891 -86056662 + AluSq/x SINE Alu 1 137 -175 1932 126 4 0 chr17 3447891 3448169 -86056384 + AluSx SINE Alu 1 279 -33 562 346 197 10 chr17 3448218 3448363 -86056190 - L3 LINE CR1 -2 1575 1458 2021 134 0 7 chr17 3448363 3448669 -86055884 + AluJb SINE Alu 1 304 -8 562 346 197 10 chr17 3448669 3448834 -86055719 - L3 LINE CR1 -119 1458 1325 2141 138 0 3 chr17 3448834 3449146 -86055407 - AluSx SINE Alu -1 311 1 562 346 197 10 chr17 3449146 3449438 -86055115 - L3 LINE CR1 -252 1325 859 244 173 177 0 chr17 3449459 3449524 -86055029 + MER5A DNA MER1_type 7 98 -91 1073 96 11 0 chr17 3450352 3450529 -86054024 + (TGGA)n Simple_repeat Simple_repeat 1 179 0 780 121 0 0 chr17 3450545 3450677 -86053876 + (TGGA)n Simple_repeat Simple_repeat 3 134 0 1092 24 0 0 chr17 3450778 3450904 -86053649 + L1PA5 LINE L1 6020 6145 -9 239 327 27 9 chr17 3451253 3451363 -86053190 + L2 LINE L2 2971 3082 -190 609 184 0 0 chr17 3451428 3451537 -86053016 - MER63 DNA MER1_type 0 1060 952 1637 127 19 0 chr17 3451543 3451802 -86052751 + L1MA9 LINE L1 6044 6307 -5 840 242 33 25 chr17 3451831 3451891 -86052662 - MER63 DNA MER1_type -96 964 906 2081 125 0 3 chr17 3451891 3452178 -86052375 + AluSx SINE Alu 1 288 -24 197 32 0 32 chr17 3452178 3452209 -86052344 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 2081 125 0 3 chr17 3452209 3452224 -86052329 + AluSx SINE Alu 288 302 -10 840 242 33 25 chr17 3452224 3452407 -86052146 - MER63 DNA MER1_type -154 906 719 827 170 105 0 chr17 3452409 3452609 -86051944 + MER44D DNA MER2_type 1 491 -118 2065 93 11 0 chr17 3452665 3452943 -86051610 + AluSx SINE Alu 30 310 -2 278 134 0 45 chr17 3452949 3453016 -86051537 - MER63 DNA MER1_type -746 184 121 * 677 149 0 25 chr17 3453014 3453135 -86051418 + MER44D DNA MER2_type 488 605 0 * 2000 189 38 34 chr17 3453135 3453535 -86051018 - MER63C DNA MER1_type -472 588 191 2173 114 7 0 chr17 3453535 3453841 -86050712 + AluSx SINE Alu 1 308 -4 2000 189 38 34 chr17 3453841 3453991 -86050562 - MER63C DNA MER1_type -869 191 33 258 32 0 0 chr17 3453991 3454022 -86050531 + (CA)n Simple_repeat Simple_repeat 2 32 0 2000 189 38 34 chr17 3454022 3454056 -86050497 - MER63C DNA MER1_type -1027 33 1 227 281 0 0 chr17 3454194 3454251 -86050302 + MIR SINE MIR 87 143 -65 835 188 0 0 chr17 3454787 3454920 -86049633 + FLAM_C SINE Alu 1 133 0 2171 89 0 0 chr17 3455135 3455416 -86049137 - AluSx SINE Alu -30 282 2 1097 201 82 11 chr17 3455440 3455719 -86048834 + L1MB2 LINE L1 5868 6166 -5 1958 109 31 14 chr17 3455719 3456012 -86048541 - AluSx SINE Alu -14 298 1 2108 125 3 0 chr17 3456294 3456598 -86047955 + AluSq SINE Alu 1 305 -8 322 137 0 0 chr17 3456690 3456741 -86047812 - Alu SINE Alu -244 55 5 319 294 89 89 chr17 3457233 3457682 -86046871 + L2 LINE L2 2824 3272 0 442 201 8 8 chr17 3457682 3457816 -86046737 + (TGGA)n Simple_repeat Simple_repeat 2 135 0 203 376 24 8 chr17 3457828 3457953 -86046600 + (TGGG)n Simple_repeat Simple_repeat 1 127 0 197 337 58 0 chr17 3457972 3458058 -86046495 - MIR SINE MIR -113 149 59 201 225 202 0 chr17 3458811 3458900 -86045653 + MIR3 SINE MIR 82 188 -20 401 281 51 7 chr17 3459336 3459510 -86045043 + MIR3 SINE MIR 4 184 -67 423 301 27 70 chr17 3460808 3460871 -86043682 + MER5B DNA MER1_type 1 65 -113 2296 102 3 3 chr17 3460871 3461184 -86043369 + AluSq SINE Alu 1 313 0 423 301 27 70 chr17 3461184 3461306 -86043247 + MER5B DNA MER1_type 65 178 0 1241 225 171 45 chr17 3463191 3463594 -86040959 + L2 LINE L2 2607 2958 -355 2271 93 0 0 chr17 3463594 3463894 -86040659 - AluSc SINE Alu -9 300 1 1241 225 171 45 chr17 3463894 3464105 -86040448 + L2 LINE L2 2958 3313 0 864 116 20 20 chr17 3464368 3464515 -86040038 + AluSg/x SINE Alu 161 307 -5 306 286 18 78 chr17 3464525 3464742 -86039811 + L1ME1 LINE L1 5955 6158 -8 257 267 238 0 chr17 3464868 3464973 -86039580 + MIR SINE MIR 17 146 -62 457 178 12 41 chr17 3465225 3465394 -86039159 + CT-rich Low_complexity Low_complexity 4 167 0 514 140 39 39 chr17 3465533 3465712 -86038841 + CT-rich Low_complexity Low_complexity 1 179 0 223 167 0 24 chr17 3465712 3465754 -86038799 + C-rich Low_complexity Low_complexity 2 42 0 364 276 158 43 chr17 3466100 3466404 -86038149 - L2 LINE L2 -8 3264 2926 2006 108 3 0 chr17 3466539 3466827 -86037726 + AluSq SINE Alu 21 309 -4 813 134 8 52 chr17 3467307 3467472 -86037081 - AluJo SINE Alu 0 312 166 812 141 0 8 chr17 3467616 3467737 -86036816 - AluJo SINE Alu -146 166 47 1987 96 55 17 chr17 3467834 3468125 -86036428 + AluSx SINE Alu 1 302 -10 2235 83 24 0 chr17 3468130 3468419 -86036134 + AluY SINE Alu 2 297 -14 442 318 52 87 chr17 3468438 3468804 -86035749 + L1MC4a LINE L1 5260 5255 -907 2292 85 0 0 chr17 3468804 3469097 -86035456 - AluSx SINE Alu -19 293 1 442 318 52 87 chr17 3469097 3469428 -86035125 + L1MC4a LINE L1 5254 5595 -567 1853 137 7 10 chr17 3469584 3469909 -86034644 + AluJb SINE Alu 1 312 0 23 0 0 0 chr17 3469972 3469995 -86034558 + AT_rich Low_complexity Low_complexity 1 23 0 191 273 101 30 chr17 3470061 3470160 -86034393 - MIR SINE MIR -59 203 98 773 97 142 0 chr17 3470160 3470312 -86034241 + AluSc SINE Alu 154 321 0 306 325 57 8 chr17 3470757 3470880 -86033673 - L2 LINE L2 0 3313 3185 2232 96 0 7 chr17 3471296 3471599 -86032954 + AluSx SINE Alu 1 301 -11 184 286 48 36 chr17 3471910 3471994 -86032559 + L2 LINE L2 2871 2955 -317 2251 90 10 6 chr17 3472158 3472469 -86032084 - AluSx SINE Alu 0 312 1 371 265 20 10 chr17 3472471 3472573 -86031980 + L2 LINE L2 3169 3271 -1 257 317 42 17 chr17 3473479 3473599 -86030954 + L2 LINE L2 2699 2821 -493 2197 114 3 0 chr17 3474211 3474518 -86030035 - AluSg SINE Alu -2 308 1 2111 105 0 53 chr17 3474927 3475250 -86029303 + AluSx SINE Alu 1 306 -6 203 178 0 22 chr17 3475324 3475369 -86029184 + (CTGGGG)n Simple_repeat Simple_repeat 6 49 0 182 288 0 51 chr17 3475621 3475680 -86028873 - MIR SINE MIR -77 185 130 698 233 17 11 chr17 3475717 3475897 -86028656 - MER4C LTR ERV1 -9 456 276 1927 119 26 35 chr17 3475916 3476228 -86028325 + AluSx SINE Alu 1 309 -3 480 172 30 96 chr17 3476270 3476377 -86028176 - MER4C LTR ERV1 -201 349 286 2191 110 0 0 chr17 3476377 3476677 -86027876 + AluSx SINE Alu 7 306 -6 480 172 30 96 chr17 3476677 3476803 -86027750 - MER4C LTR ERV1 -264 286 153 302 295 9 0 chr17 3476840 3476907 -86027646 - MIR SINE MIR -97 111 39 1836 151 35 0 chr17 3476907 3477191 -86027362 + AluSx SINE Alu 1 294 -18 302 295 9 0 chr17 3477191 3477216 -86027337 - MIR SINE MIR -169 39 16 1958 131 3 0 chr17 3477550 3477840 -86026713 + AluSx SINE Alu 1 291 -21 284 375 18 0 chr17 3478490 3478602 -86025951 - MIR SINE MIR -62 146 33 459 222 67 22 chr17 3478978 3479113 -86025440 + MIR3 SINE MIR 33 173 -35 565 284 45 7 chr17 3479450 3479605 -86024948 - L2 LINE L2 -3 3310 3150 851 177 30 3 chr17 3479733 3480112 -86024441 + (TGGA)n Simple_repeat Simple_repeat 1 389 0 770 121 42 0 chr17 3480128 3480294 -86024259 + (TGGA)n Simple_repeat Simple_repeat 1 173 0 2542 56 0 0 chr17 3480733 3481038 -86023515 - AluY SINE Alu -6 305 1 2249 112 0 13 chr17 3482085 3482398 -86022155 - AluSg SINE Alu 0 310 2 225 0 0 0 chr17 3482398 3482423 -86022130 + (TTTTC)n Simple_repeat Simple_repeat 2 26 0 2274 81 0 3 chr17 3482423 3482708 -86021845 - AluSx SINE Alu -28 284 1 424 316 131 24 chr17 3483205 3483657 -86020896 + L2 LINE L2 2306 2805 -509 329 293 73 32 chr17 3484384 3484507 -86020046 - MIR SINE MIR -8 254 127 325 340 112 5 chr17 3485439 3485636 -86018917 - L3 LINE CR1 -396 1181 964 2246 98 3 3 chr17 3486112 3486419 -86018134 + AluSx SINE Alu 4 310 -2 188 259 129 24 chr17 3487115 3487200 -86017353 + MIR3 SINE MIR 94 187 -21 195 359 60 8 chr17 3488241 3488358 -86016195 + MIR SINE MIR 92 214 -48 551 304 63 8 chr17 3488523 3488743 -86015810 + MIR SINE MIR 32 260 -2 1419 113 24 0 chr17 3489923 3490136 -86014417 + AluSg/x SINE Alu 95 312 0 2669 150 30 35 chr17 3490264 3490640 -86013913 + L1MC1 LINE L1 5413 5786 -547 2082 130 0 9 chr17 3490640 3490955 -86013598 + AluSx SINE Alu 1 312 0 2669 150 30 35 chr17 3490955 3491145 -86013408 + L1MC1 LINE L1 5786 5976 -357 2023 136 3 3 chr17 3491145 3491447 -86013106 + AluJb SINE Alu 1 302 -10 1926 128 13 13 chr17 3491458 3491762 -86012791 + AluJo SINE Alu 1 304 -8 2114 125 3 0 chr17 3491926 3492229 -86012324 + AluSx SINE Alu 1 304 -8 583 313 99 0 chr17 3492396 3492588 -86011965 + MIR SINE MIR 2 212 -50 10561 49 14 17 chr17 3492954 3494344 -86010209 - SVA Other Other 0 1386 1 216 0 0 0 chr17 3494344 3494368 -86010185 + (GGGAGA)n Simple_repeat Simple_repeat 2 25 0 414 157 14 171 chr17 3494404 3494544 -86010009 - MER58B DNA MER1_type -1 340 223 288 172 0 0 chr17 3494550 3494608 -86009945 + (CA)n Simple_repeat Simple_repeat 2 59 0 2372 91 0 0 chr17 3495149 3495457 -86009096 + AluSq SINE Alu 1 308 -5 2089 130 0 9 chr17 3495468 3495783 -86008770 + AluSq SINE Alu 1 312 -1 2181 97 3 37 chr17 3496338 3496659 -86007894 + AluSq SINE Alu 4 313 0 318 182 11 11 chr17 3496963 3497054 -86007499 + Alu SINE Alu 241 302 0 2651 39 0 0 chr17 3497299 3497610 -86006943 + AluY SINE Alu 1 311 0 368 338 0 0 chr17 3497825 3497964 -86006589 + L1MEc LINE L1 35 173 -6223 2009 128 0 44 chr17 3498018 3498164 -86006389 + AluSx SINE Alu 1 152 -160 3139 38 0 3 chr17 3498164 3498536 -86006017 + L1PA5 LINE L1 5782 6152 -2 2009 128 0 44 chr17 3498536 3498710 -86005843 + AluSx SINE Alu 152 307 -5 370 378 15 5 chr17 3498712 3498916 -86005637 + L1MEc LINE L1 165 370 -6026 714 154 18 77 chr17 3499281 3499366 -86005187 + L1MB4 LINE L1 5978 6067 -113 1917 86 79 7 chr17 3499366 3499646 -86004907 + AluSx SINE Alu 1 300 -12 714 154 18 77 chr17 3499646 3499769 -86004784 + L1MB4 LINE L1 6067 6174 -6 2255 97 0 10 chr17 3499966 3500274 -86004279 - AluSx SINE Alu -7 305 1 844 258 22 45 chr17 3501809 3501954 -86002599 + MIR SINE MIR 2 140 -122 2276 110 0 0 chr17 3501954 3502263 -86002290 + AluSx SINE Alu 1 309 -3 844 258 22 45 chr17 3502263 3502384 -86002169 + MIR SINE MIR 140 262 0 419 238 98 0 chr17 3503365 3503487 -86001066 - MER91B DNA MER1_type -56 134 1 2645 199 30 47 chr17 3503895 3503917 -86000636 + L1MC4 LINE L1 6907 6928 -1114 1905 80 113 0 chr17 3503917 3504192 -86000361 + AluSx SINE Alu 1 306 -6 2645 199 30 47 chr17 3504192 3504453 -86000100 + L1MC4 LINE L1 6928 7192 -850 2104 118 0 0 chr17 3504453 3504749 -85999804 + AluSx SINE Alu 3 298 -14 2645 199 30 47 chr17 3504749 3505194 -85999359 + L1MC4 LINE L1 7192 7624 -418 1820 115 39 21 chr17 3505194 3505480 -85999073 + AluSx SINE Alu 1 291 -21 2289 95 0 22 chr17 3505485 3505620 -85998933 + AluSx SINE Alu 1 137 -175 2323 79 0 0 chr17 3505620 3505918 -85998635 + AluY SINE Alu 1 299 -8 270 81 0 0 chr17 3505918 3505955 -85998598 + (TA)n Simple_repeat Simple_repeat 1 37 0 2289 95 0 22 chr17 3505959 3506140 -85998413 + AluSx SINE Alu 137 310 -2 2078 95 0 18 chr17 3507282 3507621 -85996932 + AluSg SINE Alu 1 334 0 1155 134 70 0 chr17 3507633 3507819 -85996734 + AluSx SINE Alu 1 199 -113 3096 144 8 16 chr17 3507940 3508454 -85996099 + L1PA16 LINE L1 5651 6160 -6 2224 107 0 0 chr17 3508732 3509031 -85995522 - AluSx SINE Alu -13 299 1 504 154 5 199 chr17 3509081 3509282 -85995271 + MER20 DNA MER1_type 1 162 -57 200 204 45 0 chr17 3509586 3509630 -85994923 - L2 LINE L2 -2 3311 3266 2280 77 7 7 chr17 3509989 3510288 -85994265 + AluSx SINE Alu 1 299 -13 623 136 164 9 chr17 3510399 3510509 -85994044 - FLAM_A SINE Alu -6 136 10 2352 68 0 3 chr17 3510859 3511153 -85993400 + AluSc SINE Alu 1 293 -16 2562 61 0 0 chr17 3511162 3511473 -85993080 + AluY SINE Alu 1 311 0 978 189 0 0 chr17 3511493 3511657 -85992896 + FRAM SINE Alu 2 165 -1 2216 91 3 7 chr17 3511945 3512241 -85992312 + AluSq SINE Alu 6 300 -13 2211 85 26 0 chr17 3513265 3513570 -85990983 + AluSp SINE Alu 1 313 0 928 93 0 0 chr17 3513572 3513701 -85990852 + AluY SINE Alu 175 303 -8 2145 109 3 0 chr17 3513779 3514073 -85990480 + AluSx SINE Alu 1 295 -17 2101 116 3 3 chr17 3514413 3514715 -85989838 - AluSp SINE Alu -11 302 1 214 296 167 9 chr17 3515347 3515455 -85989098 + MIR3 SINE MIR 48 172 -36 2045 122 3 3 chr17 3515754 3516062 -85988491 + AluSx SINE Alu 1 308 0 385 363 163 7 chr17 3516120 3516420 -85988133 - L3 LINE CR1 -39 1538 1192 1979 126 20 0 chr17 3516801 3517095 -85987458 + AluSp SINE Alu 1 300 -13 202 189 0 0 chr17 3517370 3517407 -85987146 + (CTGGGG)n Simple_repeat Simple_repeat 1 37 0 2123 119 0 22 chr17 3517790 3518108 -85986445 + AluSq SINE Alu 1 311 -2 530 202 0 29 chr17 3518249 3518353 -85986200 + AluJo SINE Alu 120 220 -92 2053 140 16 0 chr17 3518460 3518767 -85985786 - AluSx SINE Alu 0 312 1 192 291 0 0 chr17 3521933 3521988 -85982565 + MIR SINE MIR 92 146 -62 252 0 0 0 chr17 3522347 3522375 -85982178 + (TG)n Simple_repeat Simple_repeat 2 29 0 1214 109 0 0 chr17 3522375 3522540 -85982013 - AluSg/x SINE Alu -40 270 106 2424 62 7 10 chr17 3523075 3523384 -85981169 + AluSq SINE Alu 3 310 -3 246 32 0 0 chr17 3523384 3523415 -85981138 + (CAG)n Simple_repeat Simple_repeat 2 32 0 237 143 24 0 chr17 3523578 3523620 -85980933 - MER57A LTR ERV1 -66 337 295 658 243 106 23 chr17 3524394 3524612 -85979941 - MIR SINE MIR -19 243 8 234 0 0 0 chr17 3525525 3525551 -85979002 + (TCCA)n Simple_repeat Simple_repeat 1 26 0 584 265 82 0 chr17 3525908 3526078 -85978475 - MIR SINE MIR -22 240 57 377 172 98 163 chr17 3526833 3526897 -85977656 - MER105 DNA DNA -1 203 136 2246 109 0 0 chr17 3526897 3527201 -85977352 - AluSg SINE Alu -6 304 1 377 172 98 163 chr17 3527201 3527351 -85977202 - MER105 DNA DNA -68 136 3 192 345 0 0 chr17 3527640 3527695 -85976858 - MIR SINE MIR -109 153 99 2304 89 0 3 chr17 3527793 3528096 -85976457 - AluSx SINE Alu -10 302 1 2223 84 3 3 chr17 3528186 3528473 -85976080 + AluSq SINE Alu 1 287 -26 22 0 0 0 chr17 3528473 3528495 -85976058 + AT_rich Low_complexity Low_complexity 1 22 0 3148 134 23 44 chr17 3528495 3528849 -85975704 - L1MB3 LINE L1 -7 6176 5837 2038 134 27 0 chr17 3528849 3529148 -85975405 - AluSg SINE Alu -3 307 1 3148 134 23 44 chr17 3529148 3529366 -85975187 - L1MB3 LINE L1 -346 5837 5616 2038 117 0 3 chr17 3529535 3529845 -85974708 + AluSx SINE Alu 1 309 0 1379 177 42 28 chr17 3530835 3531123 -85973430 - AluJo SINE Alu -20 292 1 546 275 35 18 chr17 3531230 3531401 -85973152 - MIR SINE MIR -10 252 79 2347 63 6 19 chr17 3532069 3532386 -85972167 + AluSp SINE Alu 1 313 0 204 346 122 39 chr17 3532633 3532838 -85971715 + MIR SINE MIR 7 228 -34 191 322 132 25 chr17 3533353 3533474 -85971079 - L2 LINE L2 -260 3053 2920 2411 82 0 19 chr17 3533545 3533863 -85970690 + AluSx SINE Alu 1 312 0 503 294 69 20 chr17 3534332 3534455 -85970098 + MIR SINE MIR 49 187 -75 1984 141 0 3 chr17 3534455 3534752 -85969801 + AluSx SINE Alu 1 296 -16 503 294 69 20 chr17 3534752 3534832 -85969721 + MIR SINE MIR 187 262 0 866 255 30 64 chr17 3535117 3535177 -85969376 - MLT1I LTR MaLR -15 394 334 234 0 0 0 chr17 3535177 3535203 -85969350 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 2028 97 0 11 chr17 3535206 3535485 -85969068 - AluSx SINE Alu -31 281 6 866 255 30 64 chr17 3535485 3535718 -85968835 - MLT1I LTR MaLR -77 332 107 2163 103 14 0 chr17 3536294 3536586 -85967967 + AluSx SINE Alu 1 296 -16 2392 183 106 111 chr17 3536588 3536767 -85967786 - MER44D DNA MER2_type -1882 605 427 2243 111 0 0 chr17 3536767 3537065 -85967488 - AluSx SINE Alu -14 298 1 2392 183 106 111 chr17 3537065 3537161 -85967392 - MER44D DNA MER2_type -2060 427 332 2114 127 13 0 chr17 3537161 3537468 -85967085 + AluSx SINE Alu 1 311 -1 2392 183 106 111 chr17 3537468 3537928 -85966625 - MER44D DNA MER2_type -2155 332 1 2126 103 21 0 chr17 3538124 3538415 -85966138 - AluSx SINE Alu -15 297 1 252 0 0 0 chr17 3538552 3538580 -85965973 + (GA)n Simple_repeat Simple_repeat 1 28 0 2338 89 0 0 chr17 3540516 3540819 -85963734 + AluSq SINE Alu 1 303 -10 1955 138 20 13 chr17 3541028 3541333 -85963220 - AluSx SINE Alu -5 307 1 2081 128 3 0 chr17 3541374 3541672 -85962881 + AluSx SINE Alu 1 299 -13 416 302 16 1 chr17 3541780 3541913 -85962640 - MER5B DNA MER1_type -40 149 1 253 316 158 38 chr17 3541939 3541981 -85962572 - MER5A DNA MER1_type -1 188 152 2383 74 0 0 chr17 3541981 3542278 -85962275 - AluSg SINE Alu -13 297 1 253 316 158 38 chr17 3542278 3542393 -85962160 - MER5A DNA MER1_type -37 152 12 566 236 52 40 chr17 3542413 3542587 -85961966 + MER5B DNA MER1_type 1 176 -2 1944 96 0 0 chr17 3542648 3542897 -85961656 - AluSx SINE Alu -63 249 1 848 158 0 15 chr17 3542954 3543087 -85961466 - FLAM_A SINE Alu -2 131 1 243 310 100 0 chr17 3543343 3543443 -85961110 - MIR SINE MIR -73 135 26 2267 70 0 3 chr17 3543471 3543783 -85960770 + AluY SINE Alu 1 311 0 2433 83 0 0 chr17 3543794 3544106 -85960447 + AluSx SINE Alu 1 312 0 2285 97 0 0 chr17 3545080 3545379 -85959174 - AluSg1 SINE Alu -10 299 1 1511 196 72 19 chr17 3545379 3545860 -85958693 + MLT1F LTR MaLR 35 542 0 2116 117 3 3 chr17 3545955 3546264 -85958289 - AluSg SINE Alu -1 309 1 1096 82 0 0 chr17 3546264 3546399 -85958154 - AluSq/x SINE Alu -178 135 1 358 223 71 9 chr17 3546550 3546662 -85957891 + MER57-int LTR ERV1 127 245 -7292 516 86 26 192 chr17 3547051 3547202 -85957351 + MER57-int LTR ERV1 1177 1302 -3569 367 228 70 70 chr17 3547202 3547329 -85957224 + MER93b LTR ERV1 199 328 -45 2198 109 0 3 chr17 3547329 3547632 -85956921 - AluSg1 SINE Alu -7 302 1 367 228 70 70 chr17 3547632 3547662 -85956891 + MER93b LTR ERV1 327 356 -17 1230 156 7 48 chr17 3547692 3547727 -85956826 - L1M4 LINE L1 -391 5793 5758 2338 82 0 3 chr17 3547727 3548021 -85956532 + AluSc SINE Alu 1 293 -16 1230 156 7 48 chr17 3548021 3548254 -85956299 - L1M4 LINE L1 -426 5758 5536 2168 101 0 3 chr17 3548682 3548978 -85955575 + AluSc SINE Alu 1 295 -14 1179 181 23 30 chr17 3549160 3549426 -85955127 + MER58B DNA MER1_type 78 341 0 2338 73 0 20 chr17 3549492 3549795 -85954758 - AluY SINE Alu -14 297 1 2331 68 3 0 chr17 3549796 3550088 -85954465 - AluSg1 SINE Alu -16 293 1 773 163 6 17 chr17 3550702 3550874 -85953679 + CT-rich Low_complexity Low_complexity 2 171 0 2302 106 0 0 chr17 3550874 3551186 -85953367 - AluSx SINE Alu 0 312 1 1109 159 17 0 chr17 3551188 3551364 -85953189 - AluJb SINE Alu -16 296 118 2446 70 0 3 chr17 3551930 3552242 -85952311 - AluSx SINE Alu -1 311 1 221 270 0 40 chr17 3553028 3553102 -85951451 + MIR SINE MIR 85 155 -107 256 315 9 28 chr17 3553596 3553704 -85950849 + MIR SINE MIR 31 136 -126 1953 133 0 3 chr17 3553877 3554192 -85950361 - AluSx SINE Alu 0 314 1 2193 245 45 13 chr17 3554462 3555000 -85949553 + MLT1H1 LTR MaLR 1 555 0 2287 98 0 0 chr17 3555008 3555314 -85949239 + AluSx SINE Alu 1 306 -6 541 298 55 36 chr17 3555317 3555646 -85948907 - HAL1 LINE L1 -963 1544 1210 2208 82 0 23 chr17 3555674 3555977 -85948576 + AluY SINE Alu 4 299 -12 1084 140 0 28 chr17 3555977 3556155 -85948398 + AluSq SINE Alu 135 307 -6 509 283 69 24 chr17 3556157 3556485 -85948068 - L1M4 LINE L1 -656 5522 5182 263 206 27 0 chr17 3557470 3557543 -85947010 + L1MC5 LINE L1 7832 7906 -55 2385 84 0 0 chr17 3557558 3557856 -85946697 - AluSg SINE Alu -12 298 1 1830 166 0 13 chr17 3557880 3558188 -85946365 - AluJo SINE Alu -8 304 1 227 324 152 0 chr17 3558200 3558305 -85946248 - L3 LINE CR1 -118 1459 1339 465 332 76 5 chr17 3558339 3558550 -85946003 + MIR SINE MIR 18 243 -19 2311 93 10 0 chr17 3558684 3558985 -85945568 + AluSq SINE Alu 1 304 -9 2169 85 0 20 chr17 3559811 3560106 -85944447 + AluSx SINE Alu 1 289 -23 850 189 148 71 chr17 3560628 3560751 -85943802 + MER33 DNA MER1_type 4 116 -2469 2306 103 3 0 chr17 3560751 3561062 -85943491 - AluSx SINE Alu 0 312 1 850 189 148 71 chr17 3561062 3561205 -85943348 + MER33 DNA MER1_type 116 298 -2287 2246 79 7 0 chr17 3561205 3561495 -85943058 - AluSc SINE Alu -17 292 1 850 189 148 71 chr17 3561495 3561524 -85943029 + MER33 DNA MER1_type 298 323 -1 504 204 11 0 chr17 3561542 3561635 -85942918 + AluJ/FLAM SINE Alu 1 94 -218 258 195 0 91 chr17 3561966 3562043 -85942510 - MIR3 SINE MIR -38 170 101 2394 78 0 7 chr17 3562212 3562520 -85942033 - AluSx SINE Alu -6 306 1 1112 182 47 23 chr17 3562538 3562752 -85941801 + MER20 DNA MER1_type 1 219 0 5228 21 0 0 chr17 3562946 3563520 -85941033 + SVA Other Other 809 1382 -4 2196 111 0 7 chr17 3563528 3563835 -85940718 + AluSx SINE Alu 2 306 -6 2011 116 0 0 chr17 3564128 3564403 -85940150 + AluSx SINE Alu 1 275 -37 739 47 0 19 chr17 3564414 3564520 -85940033 + (GGAA)n Simple_repeat Simple_repeat 4 107 0 2307 33 0 0 chr17 3564520 3564793 -85939760 - AluY SINE Alu -38 273 1 299 171 198 36 chr17 3566608 3566719 -85937834 - MER106A DNA MER1_type -56 180 52 2369 60 0 10 chr17 3566723 3567024 -85937529 - AluSx SINE Alu -14 298 1 2262 104 0 0 chr17 3567484 3567782 -85936771 - AluSq SINE Alu -15 298 1 2211 102 0 0 chr17 3568633 3568927 -85935626 + AluSx SINE Alu 4 297 -15 22 56 0 0 chr17 3568927 3568963 -85935590 + AT_rich Low_complexity Low_complexity 1 36 0 1767 164 0 23 chr17 3569867 3570171 -85934382 + AluJo SINE Alu 6 302 -10 243 324 29 19 chr17 3570408 3570513 -85934040 + MARNA DNA Mariner 62 167 -419 2287 100 0 3 chr17 3570619 3570929 -85933624 - AluSg SINE Alu -1 309 1 630 174 0 0 chr17 3571280 3571418 -85933135 + (TG)n Simple_repeat Simple_repeat 1 138 0 307 283 19 9 chr17 3571486 3571592 -85932961 - MIR SINE MIR -43 165 59 2243 98 3 3 chr17 3571658 3571963 -85932590 + AluSx SINE Alu 1 305 -7 497 264 71 13 chr17 3572130 3572285 -85932268 + MIR SINE MIR 2 165 -97 2317 81 0 0 chr17 3572285 3572581 -85931972 + AluY SINE Alu 1 296 -15 1172 170 0 77 chr17 3572699 3572827 -85931726 + AluJb SINE Alu 1 101 -211 2070 104 14 7 chr17 3572827 3573115 -85931438 - AluSx SINE Alu -22 290 1 1172 170 0 77 chr17 3573115 3573245 -85931308 + AluJb SINE Alu 101 239 -73 714 258 57 0 chr17 3573386 3573580 -85930973 - MIR SINE MIR 0 262 58 2289 103 0 0 chr17 3573701 3574012 -85930541 - AluY SINE Alu 0 311 1 917 135 0 0 chr17 3574016 3574149 -85930404 - AluSq/x SINE Alu -179 133 1 2228 119 0 0 chr17 3574826 3575128 -85929425 + AluSx SINE Alu 1 302 -10 2099 115 10 7 chr17 3575531 3575835 -85928718 - AluSc SINE Alu -4 305 1 790 176 0 47 chr17 3575837 3575985 -85928568 - FLAM_C SINE Alu -2 141 1 2131 109 0 10 chr17 3578418 3578720 -85925833 + AluSx SINE Alu 3 301 -11 263 284 226 0 chr17 3578784 3578886 -85925667 + MER5A DNA MER1_type 59 183 -6 912 131 25 175 chr17 3579107 3579227 -85925326 + L1MA9 LINE L1 6036 6125 -187 229 175 0 0 chr17 3579227 3579267 -85925286 + Alu SINE Alu 135 174 -134 912 131 25 175 chr17 3579267 3579427 -85925126 + L1MA9 LINE L1 6125 6307 -5 971 211 11 0 chr17 3579571 3579756 -85924797 + AluJo SINE Alu 121 307 -5 2221 110 3 0 chr17 3580042 3580351 -85924202 - AluSx SINE Alu -2 310 1 2065 107 14 0 chr17 3580360 3580640 -85923913 - AluSx SINE Alu -28 284 1 399 287 100 10 chr17 3580687 3580923 -85923630 + L1ME3A LINE L1 5907 6162 0 2377 87 0 6 chr17 3580939 3581251 -85923302 + AluSx SINE Alu 1 310 -2 371 301 32 75 chr17 3581432 3581563 -85922990 + MIR SINE MIR 84 206 -56 2147 125 0 0 chr17 3581563 3581859 -85922694 + AluSq SINE Alu 1 296 -17 371 301 32 75 chr17 3581859 3581913 -85922640 + MIR SINE MIR 206 261 -1 847 82 16 16 chr17 3582249 3582371 -85922182 + FRAM SINE Alu 18 139 -37 2066 105 3 3 chr17 3582383 3582669 -85921884 + AluSx SINE Alu 1 286 -26 2231 108 0 0 chr17 3582849 3583145 -85921408 + AluSp SINE Alu 3 298 -15 476 286 71 18 chr17 3583401 3583569 -85920984 - MIR SINE MIR -23 239 63 2306 87 0 22 chr17 3583646 3583958 -85920595 + AluSx SINE Alu 1 305 -7 791 105 0 0 chr17 3583968 3584073 -85920480 + FLAM_C SINE Alu 1 105 -38 364 267 25 25 chr17 3585336 3585497 -85919056 + C-rich Low_complexity Low_complexity 5 165 0 310 298 17 44 chr17 3585519 3585700 -85918853 + C-rich Low_complexity Low_complexity 5 180 0 220 271 17 0 chr17 3586333 3586392 -85918161 + GA-rich Low_complexity Low_complexity 4 63 0 308 296 65 0 chr17 3588601 3588709 -85915844 - MIR SINE MIR -113 149 35 2264 101 0 0 chr17 3591286 3591583 -85912970 + AluSq SINE Alu 1 297 -16 240 35 0 0 chr17 3595001 3595030 -85909523 + (A)n Simple_repeat Simple_repeat 1 29 0 2371 67 10 0 chr17 3596322 3596622 -85907931 + AluSx SINE Alu 1 303 -9 640 257 48 62 chr17 3599113 3599145 -85905408 - MIR SINE MIR 0 262 231 2242 97 0 19 chr17 3599145 3599455 -85905098 + AluSx SINE Alu 1 304 -8 640 257 48 62 chr17 3599455 3599651 -85904902 - MIR SINE MIR -31 231 38 2090 99 7 20 chr17 3599844 3600146 -85904407 + AluSx SINE Alu 1 298 -14 2349 73 3 0 chr17 3600259 3600559 -85903994 + AluSp SINE Alu 1 301 -12 1482 157 52 28 chr17 3600610 3600896 -85903657 + AluJb SINE Alu 3 295 -17 272 343 72 12 chr17 3601034 3601200 -85903353 - L2 LINE L2 -214 3058 2883 502 155 10 62 chr17 3601237 3601334 -85903219 + FRAM SINE Alu 4 95 -81 298 247 62 0 chr17 3601794 3601875 -85902678 - L1ME LINE L1 -343 5778 5693 2137 110 0 25 chr17 3602159 3602477 -85902076 + AluSg SINE Alu 1 310 0 234 313 115 0 chr17 3603136 3603232 -85901321 - MIR3 SINE MIR -11 197 91 2295 50 9 40 chr17 3603287 3603608 -85900945 + AluY SINE Alu 1 311 0 675 335 80 15 chr17 3603948 3604285 -85900268 + L2 LINE L2 2914 3272 0 2141 95 3 3 chr17 3604304 3604600 -85899953 - AluSx SINE Alu -16 296 1 2216 88 7 3 chr17 3604815 3605111 -85899442 - AluSg SINE Alu -13 297 1 240 237 246 26 chr17 3605893 3606007 -85898546 - MER5A DNA MER1_type 0 189 51 2224 102 0 0 chr17 3606040 3606343 -85898210 + AluSx SINE Alu 1 303 -9 735 266 58 0 chr17 3608391 3608579 -85895974 + MIR SINE MIR 43 241 -21 268 300 14 0 chr17 3610864 3610934 -85893619 - MIR3 SINE MIR -51 157 87 335 283 52 38 chr17 3611296 3611490 -85893063 - MIR SINE MIR -51 211 18 217 257 206 37 chr17 3611517 3611653 -85892900 - L2 LINE L2 -2 3270 3112 2344 89 0 3 chr17 3612018 3612331 -85892222 + AluSq SINE Alu 2 313 0 2331 76 10 0 chr17 3612725 3613028 -85891525 + AluSx SINE Alu 1 306 -6 442 191 12 12 chr17 3613512 3613596 -85890957 + MER20 DNA MER1_type 64 147 -72 1780 147 7 3 chr17 3613596 3613882 -85890671 + AluJo SINE Alu 1 287 -25 2217 98 3 3 chr17 3614101 3614407 -85890146 - AluSp SINE Alu -7 306 1 657 209 0 0 chr17 3617656 3617809 -85886744 + (CA)n Simple_repeat Simple_repeat 1 153 0 1922 71 61 46 chr17 3619864 3620167 -85884386 + AluY SINE Alu 1 307 0 414 130 0 0 chr17 3620308 3620377 -85884176 + L1MC4 LINE L1 7475 7543 -499 1674 162 47 0 chr17 3620384 3620681 -85883872 + AluJb SINE Alu 1 311 -1 1824 179 12 66 chr17 3620700 3621279 -85883274 + L1MB5 LINE L1 5099 5659 -525 2089 113 0 19 chr17 3621279 3621598 -85882955 + AluSq SINE Alu 1 313 0 1824 179 12 66 chr17 3621598 3621649 -85882904 + L1MB5 LINE L1 5659 5711 -473 307 109 31 47 chr17 3621650 3621714 -85882839 - AluSq SINE Alu -1 301 239 1128 144 0 28 chr17 3621714 3621894 -85882659 - AluSq SINE Alu -137 176 2 1139 186 4 30 chr17 3621897 3622133 -85882420 + L1MB5 LINE L1 5730 5959 -215 1463 81 5 10 chr17 3622133 3622331 -85882222 - AluSx SINE Alu -115 197 1 605 213 20 25 chr17 3622373 3622542 -85882011 + MLT1B LTR MaLR 166 342 -36 22 35 0 0 chr17 3623974 3624003 -85880550 + GC_rich Low_complexity Low_complexity 1 29 0 219 69 0 0 chr17 3624086 3624115 -85880438 + (TCC)n Simple_repeat Simple_repeat 1 29 0 2220 60 50 10 chr17 3624265 3624565 -85879988 - AluSx SINE Alu 0 312 1 325 330 54 0 chr17 3625419 3625531 -85879022 - MER5A DNA MER1_type -9 180 63 433 333 128 27 chr17 3625557 3625854 -85878699 + L2 LINE L2 2986 3312 -1 1254 179 0 48 chr17 3626749 3626874 -85877679 + AluJo SINE Alu 1 130 -182 480 18 0 0 chr17 3626874 3626931 -85877622 + (CA)n Simple_repeat Simple_repeat 2 58 0 1254 179 0 48 chr17 3626931 3626949 -85877604 + AluJo SINE Alu 130 147 -165 1784 139 17 10 chr17 3626949 3627237 -85877316 + AluJo SINE Alu 1 290 -22 1254 179 0 48 chr17 3627237 3627343 -85877210 + AluJo SINE Alu 147 239 -73 2005 119 0 0 chr17 3627361 3627785 -85876768 + AluSg SINE Alu 2 425 0 288 263 105 26 chr17 3627791 3627905 -85876648 - MER112 DNA MER1_type -136 124 2 2245 91 0 0 chr17 3628056 3628352 -85876201 + AluSg SINE Alu 1 296 -14 1651 181 24 0 chr17 3628424 3628717 -85875836 + MSTB LTR MaLR 1 300 -126 1339 101 105 5 chr17 3628941 3629150 -85875403 - MER30 DNA MER1_type 0 230 1 2257 96 3 6 chr17 3629215 3629527 -85875026 + AluSp SINE Alu 3 313 0 1871 96 0 76 chr17 3629556 3629857 -85874696 - AluSx SINE Alu -4 308 31 4409 88 189 23 chr17 3629857 3630565 -85873988 + LTR12 LTR ERV1 1 826 0 1517 165 9 71 chr17 3630990 3631312 -85873241 + AluJo SINE Alu 1 302 -10 2377 76 0 13 chr17 3631586 3631903 -85872650 + AluSp SINE Alu 1 313 0 2166 109 3 3 chr17 3632496 3632800 -85871753 + AluSp SINE Alu 1 304 -9 1666 165 0 26 chr17 3633572 3633732 -85870821 - AluJb SINE Alu -17 295 145 2107 110 3 3 chr17 3633732 3634024 -85870529 - AluSc SINE Alu -17 292 1 1666 165 0 26 chr17 3634024 3634166 -85870387 - AluJb SINE Alu -167 145 1 1774 85 0 0 chr17 3634442 3634677 -85869876 - AluSc SINE Alu -70 239 5 692 236 109 0 chr17 3634677 3634906 -85869647 + Charlie4a DNA MER1_type 159 412 -96 2518 56 0 0 chr17 3635548 3635850 -85868703 + AluY SINE Alu 1 302 -9 228 296 0 0 chr17 3636361 3636415 -85868138 + L1ME LINE L1 5529 5582 -539 1990 100 0 0 chr17 3636716 3636987 -85867566 - AluSx SINE Alu -8 304 34 546 175 133 33 chr17 3637271 3637391 -85867162 + FLAM_A SINE Alu 1 132 -1 2052 85 14 11 chr17 3637398 3637716 -85866837 + AluSg SINE Alu 1 319 0 2068 123 0 0 chr17 3637913 3638206 -85866347 + AluSx SINE Alu 1 293 -19 22 0 0 0 chr17 3638206 3638228 -85866325 + AT_rich Low_complexity Low_complexity 1 22 0 2028 137 7 0 chr17 3638414 3638720 -85865833 + AluSx SINE Alu 1 308 -4 1082 104 0 31 chr17 3639136 3639158 -85865395 - AluSg/x SINE Alu -8 304 283 2266 83 6 6 chr17 3639158 3639470 -85865083 - AluSx SINE Alu 0 312 1 201 39 0 0 chr17 3639473 3639499 -85865054 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1082 104 0 31 chr17 3639499 3639635 -85864918 - AluSg/x SINE Alu -31 281 147 655 328 94 55 chr17 3640318 3640443 -85864110 + L1M4 LINE L1 4156 4275 -1871 2167 71 14 10 chr17 3640443 3640737 -85863816 + AluSx SINE Alu 1 295 -17 655 328 94 55 chr17 3640737 3640864 -85863689 + L1M4 LINE L1 4275 4396 -1750 1535 171 34 13 chr17 3640864 3641162 -85863391 + AluJo SINE Alu 1 304 -8 655 328 94 55 chr17 3641162 3641252 -85863301 + L1M4 LINE L1 4396 4481 -1665 2286 103 3 0 chr17 3641252 3641563 -85862990 + AluSp SINE Alu 2 313 0 655 328 94 55 chr17 3641563 3641721 -85862832 + L1M4 LINE L1 4481 4631 -1515 2308 72 0 0 chr17 3641721 3642012 -85862541 - AluY SINE Alu -20 291 1 2379 77 0 0 chr17 3642014 3642311 -85862242 - AluSc SINE Alu -12 297 1 655 328 94 55 chr17 3642311 3642386 -85862167 + L1M4 LINE L1 4631 4760 -1386 1353 178 15 37 chr17 3643370 3643640 -85860913 + AluJo SINE Alu 15 278 -34 2091 85 0 51 chr17 3643660 3643976 -85860577 + AluSg SINE Alu 1 300 -10 268 320 13 0 chr17 3645424 3645499 -85859054 + L3 LINE CR1 1481 1556 -21 474 310 58 65 chr17 3645931 3646192 -85858361 + MLT1L LTR MaLR 136 394 -221 2134 117 0 13 chr17 3646730 3647046 -85857507 + AluSx SINE Alu 1 312 0 1949 116 7 3 chr17 3647496 3647807 -85856746 - AluSx SINE Alu 0 312 1 2204 103 0 3 chr17 3648361 3648662 -85855891 - AluSx SINE Alu -12 300 1 1972 145 0 0 chr17 3648718 3649008 -85855545 - AluJb SINE Alu -22 290 1 2005 135 0 19 chr17 3649040 3649351 -85855202 - AluJo SINE Alu -3 309 5 225 265 0 0 chr17 3649491 3649540 -85855013 - L2 LINE L2 -243 3070 3022 1248 146 5 36 chr17 3649541 3649675 -85854878 + AluSx SINE Alu 1 129 -183 2148 62 47 0 chr17 3649675 3649950 -85854603 + AluSp SINE Alu 1 287 -26 190 0 0 0 chr17 3649950 3649971 -85854582 + (GAAAA)n Simple_repeat Simple_repeat 3 150 0 2453 65 3 0 chr17 3649977 3650285 -85854268 + AluSx SINE Alu 1 309 -3 1063 311 36 60 chr17 3650303 3651055 -85853498 - L2 LINE L2 -312 3001 2266 861 102 0 8 chr17 3654324 3654442 -85850111 + FLAM_A SINE Alu 1 117 -16 2150 90 0 29 chr17 3654496 3654807 -85849746 - AluSg SINE Alu -8 302 1 2472 65 0 0 chr17 3655168 3655476 -85849077 - AluY SINE Alu -3 308 1 816 226 6 0 chr17 3655982 3656141 -85848412 - AluJb SINE Alu -13 299 140 2350 94 3 0 chr17 3656146 3656454 -85848099 - AluSx SINE Alu -3 309 1 2202 98 0 25 chr17 3656531 3656847 -85847706 + AluSx SINE Alu 1 308 -4 2087 112 3 0 chr17 3657390 3657676 -85846877 - AluSx SINE Alu -25 287 1 1451 99 33 5 chr17 3657677 3657888 -85846665 - L1PA10 LINE L1 -13 6155 5939 2190 75 4 0 chr17 3657955 3658286 -85846267 + AluSg1 SINE Alu 1 332 0 791 187 79 30 chr17 3658361 3658564 -85845989 - MER20 DNA MER1_type -1 218 6 2511 77 0 0 chr17 3659144 3659454 -85845099 - AluSx SINE Alu -2 310 1 2219 108 0 10 chr17 3659603 3659909 -85844644 + AluSx SINE Alu 1 303 -9 286 319 88 96 chr17 3660352 3660612 -85843941 - L2 LINE L2 -8 3264 3007 520 187 18 160 chr17 3660676 3660785 -85843768 - MER105 DNA DNA -13 191 68 2261 103 3 3 chr17 3660785 3661097 -85843456 - AluSq SINE Alu -1 312 1 520 187 18 160 chr17 3661097 3661128 -85843425 - MER105 DNA DNA -136 68 34 2135 193 159 48 chr17 3661128 3661227 -85843326 - LTR65 LTR ERV1 0 669 582 2190 86 4 0 chr17 3661227 3661529 -85843024 - AluSx SINE Alu 0 307 5 2135 193 159 48 chr17 3661529 3661878 -85842675 - LTR65 LTR ERV1 -87 582 134 2433 59 0 10 chr17 3661878 3662185 -85842368 - AluY SINE Alu -7 304 1 2135 193 159 48 chr17 3662185 3662336 -85842217 - LTR65 LTR ERV1 -535 134 1 520 187 18 160 chr17 3662336 3662413 -85842140 - MER105 DNA DNA -170 34 4 1529 123 11 84 chr17 3662835 3662975 -85841578 - AluJb SINE Alu -49 263 153 2383 76 3 0 chr17 3662975 3663279 -85841274 - AluSp SINE Alu -8 305 1 1529 123 11 84 chr17 3663279 3663422 -85841131 - AluJb SINE Alu -159 153 1 469 248 142 0 chr17 3663554 3663695 -85840858 - MIR SINE MIR -1 261 101 2043 101 4 0 chr17 3663695 3663973 -85840580 + AluSx SINE Alu 22 300 -12 1067 127 7 0 chr17 3663973 3664146 -85840407 + AluSq SINE Alu 134 307 0 274 333 51 0 chr17 3664487 3664604 -85839949 + L3 LINE CR1 1308 1430 -147 401 21 0 0 chr17 3664605 3664653 -85839900 - AluY SINE Alu -265 48 1 254 309 107 98 chr17 3664715 3664824 -85839729 - L2 LINE L2 -636 2678 2572 2212 117 3 0 chr17 3664824 3665133 -85839420 + AluSx SINE Alu 1 310 -2 254 309 107 98 chr17 3665133 3665443 -85839110 - L2 LINE L2 -742 2572 2255 2120 84 0 0 chr17 3666006 3666281 -85838272 - AluSg SINE Alu -35 275 1 864 246 72 0 chr17 3666354 3666549 -85838004 + MER3 DNA MER1_type 1 209 0 726 277 179 14 chr17 3666704 3667244 -85837309 + L2 LINE L2 2667 3313 0 2191 117 3 0 chr17 3668179 3668488 -85836065 - AluSx SINE Alu -2 310 1 2506 29 3 32 chr17 3668883 3669198 -85835355 - AluY SINE Alu -5 306 1 2108 148 41 35 chr17 3669501 3669606 -85834947 + L1MC4 LINE L1 7378 7481 -561 2266 97 3 0 chr17 3669606 3669904 -85834649 + AluSq SINE Alu 1 299 -14 2108 148 41 35 chr17 3669904 3670259 -85834294 + L1MC4 LINE L1 7481 7841 -201 1252 121 0 0 chr17 3670267 3670440 -85834113 - AluSg/x SINE Alu -14 298 126 2116 109 0 34 chr17 3670440 3670762 -85833791 - AluSx SINE Alu -1 311 1 205 264 58 58 chr17 3671136 3671223 -85833330 + MIR3 SINE MIR 107 193 -15 2516 74 0 0 chr17 3671502 3671813 -85832740 - AluSx SINE Alu -1 311 1 810 222 0 30 chr17 3671815 3671982 -85832571 - FRAM SINE Alu 0 166 5 2211 103 6 13 chr17 3672248 3672559 -85831994 - AluSx SINE Alu -3 309 1 2224 102 0 0 chr17 3673149 3673452 -85831101 - AluSq SINE Alu -10 303 1 239 330 52 0 chr17 3674094 3674209 -85830344 - MIR3 SINE MIR -7 201 81 2289 83 6 10 chr17 3674256 3674568 -85829985 - AluY SINE Alu 0 311 1 1150 38 0 0 chr17 3674570 3674701 -85829852 - AluY SINE Alu -180 131 1 2239 70 27 10 chr17 3675120 3675419 -85829134 - AluY SINE Alu -7 304 1 1079 277 177 43 chr17 3675932 3676115 -85828438 - L2 LINE L2 -1 3312 3155 2149 94 3 3 chr17 3676115 3676414 -85828139 + AluSx SINE Alu 1 299 -13 1079 277 177 43 chr17 3676414 3677063 -85827490 - L2 LINE L2 -158 3155 2311 2427 50 7 0 chr17 3677063 3677361 -85827192 - AluY SINE Alu -10 301 2 1079 277 177 43 chr17 3677361 3677520 -85827033 - L2 LINE L2 -1002 2311 2175 2242 112 0 0 chr17 3677546 3677850 -85826703 + AluSg SINE Alu 1 304 -6 572 307 146 0 chr17 3677869 3678061 -85826492 - MIR SINE MIR -35 227 8 420 278 26 57 chr17 3680054 3680233 -85824320 + MIR SINE MIR 14 192 -61 2093 126 17 0 chr17 3680284 3680578 -85823975 + AluSx SINE Alu 1 299 -13 2167 111 7 0 chr17 3680579 3680885 -85823668 + AluSp SINE Alu 2 309 -4 219 231 102 37 chr17 3681466 3681574 -85822979 + MIR3 SINE MIR 40 154 -54 1773 117 53 0 chr17 3682075 3682363 -85822190 - AluSx SINE Alu 0 307 6 303 187 0 133 chr17 3682660 3682863 -85821690 + C-rich Low_complexity Low_complexity 4 179 0 569 113 0 0 chr17 3683413 3683493 -85821060 + AluSg/x SINE Alu 219 298 -14 274 221 253 0 chr17 3683825 3683920 -85820633 + MIR SINE MIR 21 139 -69 187 286 143 0 chr17 3683901 3683978 -85820575 + L2 LINE L2 3137 3224 -48 * 258 359 18 41 chr17 3683980 3684035 -85820518 - MIR3 SINE MIR -2 206 151 1783 152 13 32 chr17 3684035 3684212 -85820341 - AluSx SINE Alu -2 310 140 2132 118 0 10 chr17 3684212 3684516 -85820037 - AluSx SINE Alu -11 301 1 1783 152 13 32 chr17 3684516 3684654 -85819899 - AluSx SINE Alu -172 140 1 258 359 18 41 chr17 3684654 3684768 -85819785 - MIR3 SINE MIR -57 151 41 325 230 62 120 chr17 3684982 3685291 -85819262 + L2 LINE L2 2747 3052 -220 219 258 72 41 chr17 3685787 3685884 -85818669 - MIR SINE MIR -87 121 22 570 232 14 162 chr17 3685949 3686055 -85818498 - MIR SINE MIR 0 262 142 1108 148 0 0 chr17 3686055 3686217 -85818336 - FRAM SINE Alu 0 166 5 570 232 14 162 chr17 3686217 3686249 -85818304 - MIR SINE MIR -120 142 107 2145 112 3 16 chr17 3686249 3686563 -85817990 - AluSx SINE Alu -2 310 1 570 232 14 162 chr17 3686563 3686655 -85817898 - MIR SINE MIR -155 107 78 2473 62 3 0 chr17 3686655 3686959 -85817594 + AluY SINE Alu 1 305 -6 570 232 14 162 chr17 3686959 3687010 -85817543 - MIR SINE MIR -184 78 21 507 254 125 19 chr17 3687599 3687954 -85816599 + MLT1H1 LTR MaLR 86 547 -8 2200 117 3 3 chr17 3688241 3688550 -85816003 - AluSx SINE Alu -3 309 1 274 208 20 89 chr17 3688613 3688714 -85815839 + MIR3 SINE MIR 81 174 -34 336 111 0 0 chr17 3688828 3688882 -85815671 + (TCC)n Simple_repeat Simple_repeat 1 54 0 2405 68 3 10 chr17 3690400 3690708 -85813845 - AluY SINE Alu -4 307 2 2027 134 7 0 chr17 3690712 3691003 -85813550 - AluSx SINE Alu -19 293 1 288 0 0 0 chr17 3691117 3691149 -85813404 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 239 310 0 0 chr17 3691155 3691213 -85813340 - L2 LINE L2 -19 3294 3237 2179 92 0 0 chr17 3692225 3692528 -85812025 + AluSx SINE Alu 1 303 0 208 281 24 85 chr17 3692659 3692741 -85811812 + L3 LINE CR1 1377 1453 -124 2571 43 0 0 chr17 3692878 3693181 -85811372 + AluY SINE Alu 1 303 -8 559 288 179 11 chr17 3693361 3693729 -85810824 + L2 LINE L2 1818 2247 -1067 1181 119 0 21 chr17 3693731 3693925 -85810628 + MLT1D LTR MaLR 1 190 -315 1113 45 0 0 chr17 3693934 3694088 -85810465 + GSAT Satellite centromeric 32 185 -32 * 1215 189 124 40 chr17 3694083 3694336 -85810217 + MLT1D LTR MaLR 154 384 -121 1912 107 0 21 chr17 3694336 3694616 -85809937 + AluSq SINE Alu 1 274 -39 410 0 0 20 chr17 3694620 3694671 -85809882 + (TAA)n Simple_repeat Simple_repeat 2 51 0 1215 189 124 40 chr17 3694671 3694735 -85809818 + MLT1D LTR MaLR 386 503 -2 555 273 23 11 chr17 3694735 3694911 -85809642 + L2 LINE L2 2355 2532 -782 2268 104 0 3 chr17 3694911 3695220 -85809333 - AluSq SINE Alu -5 308 1 1050 96 0 0 chr17 3695220 3695355 -85809198 - AluSq/x SINE Alu -177 135 1 1297 183 48 8 chr17 3695451 3695702 -85808851 - AluJb SINE Alu -17 295 35 704 176 155 10 chr17 3695705 3695888 -85808665 + MLT1D LTR MaLR 245 436 -69 1735 154 0 8 chr17 3695956 3696222 -85808331 - AluJb SINE Alu -20 292 29 589 312 159 3 chr17 3696404 3696718 -85807835 + L2 LINE L2 2945 3307 -6 257 310 20 40 chr17 3697206 3697306 -85807247 - MER91C DNA MER1_type -3 137 40 2095 114 0 29 chr17 3697507 3697822 -85806731 - AluSx SINE Alu -6 306 1 2248 102 0 31 chr17 3697937 3698259 -85806294 - AluSx SINE Alu 0 312 1 737 289 120 25 chr17 3698955 3699356 -85805197 + L1ME3A LINE L1 5691 6129 -41 2336 77 13 10 chr17 3699356 3699666 -85804887 - AluSq SINE Alu -2 311 1 360 319 128 57 chr17 3699844 3700227 -85804326 + L2 LINE L2 2849 3258 -14 261 0 0 0 chr17 3700228 3700257 -85804296 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 2388 81 7 0 chr17 3700297 3700592 -85803961 - AluSx SINE Alu -14 298 2 3562 209 28 42 chr17 3700690 3701039 -85803514 - MER21B LTR ERV1 -49 814 462 2201 90 24 3 chr17 3701039 3701329 -85803224 + AluSg SINE Alu 1 296 -14 3562 209 28 42 chr17 3701329 3701792 -85802761 - MER21B LTR ERV1 -401 462 13 2285 103 0 25 chr17 3702324 3702644 -85801909 + AluSx SINE Alu 1 312 0 1597 151 6 71 chr17 3702790 3703101 -85801452 - AluJb SINE Alu -17 295 5 385 319 128 21 chr17 3703223 3703321 -85801232 - L1ME LINE L1 -360 5804 5718 2205 98 0 35 chr17 3703321 3703637 -85800916 - AluSx SINE Alu -6 306 2 385 319 128 21 chr17 3703637 3703865 -85800688 - L1ME LINE L1 -446 5718 5437 2604 63 0 0 chr17 3703923 3704225 -85800328 - AluSx SINE Alu -9 303 2 406 318 65 15 chr17 3704230 3704431 -85800122 - MIR SINE MIR -43 219 9 1532 151 12 15 chr17 3704469 3704728 -85799825 - AluJb SINE Alu -54 258 1 277 129 71 14 chr17 3704731 3704801 -85799752 + L1ME4a LINE L1 6047 6120 -1 2585 40 0 7 chr17 3704827 3705131 -85799422 - AluY SINE Alu -9 302 1 185 265 41 0 chr17 3705875 3705924 -85798629 + L2 LINE L2 3148 3198 -74 698 209 39 34 chr17 3705935 3706141 -85798412 + L1ME2 LINE L1 5648 5854 -310 2065 117 0 47 chr17 3706173 3706490 -85798063 + AluSx SINE Alu 1 302 -10 386 193 67 44 chr17 3706522 3706657 -85797896 - L1MC4 LINE L1 -933 7109 6972 544 346 29 8 chr17 3706660 3706903 -85797650 + L1MEc LINE L1 51 298 -6098 916 219 45 20 chr17 3706913 3707159 -85797394 + L1ME2 LINE L1 5903 6154 -10 427 220 47 127 chr17 3707176 3707232 -85797321 + L1MC5 LINE L1 7708 7767 -194 2120 116 0 28 chr17 3707232 3707551 -85797002 - AluSx SINE Alu -1 311 2 427 220 47 127 chr17 3707551 3707730 -85796823 + L1MC5 LINE L1 7767 7924 -37 227 322 44 22 chr17 3707745 3707835 -85796718 - L1MC/D LINE L1 -2219 5589 5498 2287 65 0 77 chr17 3707898 3708084 -85796469 - AluSp SINE Alu -14 299 147 2347 79 26 3 chr17 3708084 3708387 -85796166 - AluY SINE Alu -1 310 1 2287 65 0 77 chr17 3708387 3708524 -85796029 - AluSp SINE Alu -166 147 1 722 81 0 10 chr17 3708524 3708623 -85795930 - AluSp SINE Alu -178 135 38 1794 155 0 20 chr17 3708625 3708922 -85795631 - AluJb SINE Alu -9 303 13 1923 111 36 33 chr17 3709272 3709578 -85794975 - AluSx SINE Alu -1 311 5 2321 94 3 10 chr17 3710058 3710366 -85794187 - AluSx SINE Alu -6 306 1 363 293 8 0 chr17 3710729 3710862 -85793691 + L1M4 LINE L1 2419 2552 -3594 1312 130 0 0 chr17 3710900 3711085 -85793468 + AluSq SINE Alu 1 185 -128 1206 101 0 0 chr17 3711187 3711336 -85793217 - AluSg SINE Alu -161 149 1 1850 155 28 17 chr17 3711741 3712032 -85792521 + AluJb SINE Alu 5 298 -14 253 322 106 28 chr17 3712395 3712575 -85791978 + MIR SINE MIR 5 198 -64 316 322 93 57 chr17 3713402 3713703 -85790850 + HAL1b LINE L1 901 1212 -136 1860 169 0 32 chr17 3713762 3714076 -85790477 + AluJb SINE Alu 1 304 -8 359 257 112 14 chr17 3714114 3714328 -85790225 + L1M4 LINE L1 5140 5374 -772 1374 97 0 6 chr17 3714375 3714551 -85790002 + AluSq SINE Alu 3 177 -136 488 260 46 62 chr17 3714688 3714807 -85789746 - L1M4 LINE L1 -2687 3459 3340 2657 36 0 0 chr17 3714807 3715108 -85789445 - AluY SINE Alu -10 301 1 488 260 46 62 chr17 3715108 3715437 -85789116 - L1M4 LINE L1 -2806 3340 3007 803 39 10 0 chr17 3715437 3715540 -85789013 + (TTCC)n Simple_repeat Simple_repeat 1 104 0 1995 128 4 0 chr17 3715542 3715816 -85788737 - AluSx SINE Alu -37 275 1 1703 168 0 70 chr17 3715819 3716147 -85788406 - AluJb SINE Alu -1 311 7 488 260 46 62 chr17 3716147 3716313 -85788240 - L1M4 LINE L1 -3142 3004 2675 2508 69 0 0 chr17 3716314 3716605 -85787948 + AluSc SINE Alu 5 295 -14 2025 93 0 76 chr17 3716729 3717031 -85787522 - AluSx SINE Alu -3 309 31 4535 89 136 33 chr17 3717031 3717780 -85786773 + LTR12 LTR ERV1 1 826 0 1629 165 9 71 chr17 3718206 3718528 -85786025 + AluJo SINE Alu 1 302 -10 2463 80 0 13 chr17 3718802 3719115 -85785438 + AluSp SINE Alu 1 309 -4 2269 112 3 3 chr17 3719708 3720012 -85784541 + AluSp SINE Alu 1 304 -9 1793 165 0 26 chr17 3720784 3720944 -85783609 - AluJb SINE Alu -17 295 145 2223 113 3 3 chr17 3720944 3721236 -85783317 - AluSc SINE Alu -17 292 1 1793 165 0 26 chr17 3721236 3721378 -85783175 - AluJb SINE Alu -167 145 1 1878 85 0 0 chr17 3721654 3721889 -85782664 - AluSc SINE Alu -70 239 5 697 236 109 0 chr17 3721889 3722118 -85782435 + Charlie4a DNA MER1_type 159 412 -96 2683 43 0 0 chr17 3722760 3723059 -85781494 + AluY SINE Alu 1 299 -12 180 0 0 0 chr17 3723059 3723079 -85781474 + (TA)n Simple_repeat Simple_repeat 2 21 0 555 259 0 0 chr17 3724027 3724368 -85780185 + (CA)n Simple_repeat Simple_repeat 1 341 0 249 266 0 0 chr17 3724383 3724477 -85780076 + (CA)n Simple_repeat Simple_repeat 1 94 0 181 268 0 0 chr17 3724755 3724796 -85779757 + L2 LINE L2 3206 3246 -26 318 227 0 23 chr17 3725386 3725474 -85779079 - AluJ/FRAM SINE Alu 0 302 217 * 331 170 86 0 chr17 3725433 3725517 -85779036 + AluJ/FRAM SINE Alu 221 302 0 415 261 15 46 chr17 3725544 3725674 -85778879 + L1MC5 LINE L1 6995 7120 -841 280 109 18 18 chr17 3725686 3725741 -85778812 + (TCCC)n Simple_repeat Simple_repeat 4 58 0 2177 133 0 3 chr17 3725745 3726054 -85778499 - AluSx SINE Alu -4 308 1 273 260 75 48 chr17 3726101 3726247 -85778306 + L1MC4 LINE L1 7100 7249 -793 237 318 103 0 chr17 3726251 3726358 -85778195 + L1MC4 LINE L1 7323 7440 -602 281 286 26 0 chr17 3726363 3726440 -85778113 - MER5A DNA MER1_type -107 82 4 1972 116 3 27 chr17 3726482 3726773 -85777780 + AluSx SINE Alu 1 286 -26 192 40 0 0 chr17 3726773 3726798 -85777755 + (CA)n Simple_repeat Simple_repeat 2 26 0 287 279 79 92 chr17 3726891 3727143 -85777410 + L1MC5 LINE L1 7340 7594 -367 2583 50 0 3 chr17 3727143 3727442 -85777111 + AluY SINE Alu 1 298 -13 287 279 79 92 chr17 3727442 3727558 -85776995 + L1MC5 LINE L1 7594 7704 -257 2300 109 0 0 chr17 3727558 3727852 -85776701 - AluSx SINE Alu -18 294 1 287 279 79 92 chr17 3727852 3727926 -85776627 + L1MC5 LINE L1 7704 7777 -184 462 253 136 6 chr17 3727927 3728089 -85776464 - MER5A DNA MER1_type -3 186 4 2209 94 16 10 chr17 3728381 3728689 -85775864 - AluSx SINE Alu -2 310 1 2199 109 3 7 chr17 3729320 3729623 -85774930 - AluSg SINE Alu -8 302 1 680 172 0 0 chr17 3729623 3729739 -85774814 - AluSg/x SINE Alu -14 296 181 1283 117 11 0 chr17 3729939 3730118 -85774435 - AluY SINE Alu -130 181 1 2477 83 0 3 chr17 3730246 3730548 -85774005 - AluSg SINE Alu -9 301 1 915 120 0 35 chr17 3730549 3730691 -85773862 - AluJo SINE Alu -175 137 1 199 333 23 0 chr17 3730732 3730819 -85773734 + L2 LINE L2 3157 3245 -27 181 268 0 0 chr17 3731726 3731767 -85772786 - L2 LINE L2 -26 3246 3206 249 266 0 0 chr17 3732046 3732140 -85772413 + (TG)n Simple_repeat Simple_repeat 1 94 0 627 253 0 0 chr17 3732155 3732504 -85772049 + (TG)n Simple_repeat Simple_repeat 1 349 0 216 0 0 0 chr17 3733451 3733475 -85771078 + (TA)n Simple_repeat Simple_repeat 2 25 0 2660 47 0 0 chr17 3733475 3733771 -85770782 - AluY SINE Alu -15 296 1 2310 98 0 0 chr17 3733771 3734067 -85770486 - AluSx SINE Alu -16 296 1 204 265 47 47 chr17 3734704 3734874 -85769679 + L2 LINE L2 2868 3037 -235 281 275 75 50 chr17 3735825 3735985 -85768568 + MIR3 SINE MIR 30 193 -15 1936 119 29 4 chr17 3736153 3736456 -85768097 + AluSx SINE Alu 1 310 0 672 232 7 13 chr17 3738368 3738523 -85766030 + MER3 DNA MER1_type 3 156 -53 1292 234 68 45 chr17 3739532 3740045 -85764508 + L1MC4 LINE L1 7516 8040 -2 26 0 0 0 chr17 3740046 3740072 -85764481 + AT_rich Low_complexity Low_complexity 1 26 0 2259 65 3 20 chr17 3740124 3740417 -85764136 + AluY SINE Alu 1 288 -23 448 215 25 66 chr17 3740417 3740538 -85764015 + FLAM_A SINE Alu 11 126 -16 2042 128 7 10 chr17 3740599 3740897 -85763656 + AluSx SINE Alu 1 297 -15 302 296 181 10 chr17 3741067 3741266 -85763287 - MIR SINE MIR -18 244 12 2404 81 10 0 chr17 3741303 3741601 -85762952 - AluSx SINE Alu -11 301 1 570 226 96 7 chr17 3741674 3741820 -85762733 + MLT1A2 LTR MaLR 1 159 -215 315 278 10 21 chr17 3742126 3742223 -85762330 - MIR3 SINE MIR -20 188 93 2419 77 0 3 chr17 3742426 3742723 -85761830 - AluSx SINE Alu -16 296 1 180 0 0 0 chr17 3743063 3743083 -85761470 + (A)n Simple_repeat Simple_repeat 1 20 0 191 287 84 28 chr17 3743872 3744015 -85760538 - L2 LINE L2 0 3313 3163 448 304 37 12 chr17 3744121 3744282 -85760271 - L2 LINE L2 -20 3252 3088 620 117 11 0 chr17 3745091 3745185 -85759368 - FRAM SINE Alu -24 152 58 225 330 10 20 chr17 3745185 3745285 -85759268 - L2 LINE L2 -529 2785 2687 460 92 0 0 chr17 3745285 3745350 -85759203 + L1MB8 LINE L1 5377 5441 -737 856 128 7 54 chr17 3745350 3745498 -85759055 + FLAM_C SINE Alu 1 141 -2 3122 163 82 43 chr17 3745501 3745772 -85758781 + L1MB8 LINE L1 5428 5687 -491 2214 104 3 10 chr17 3745772 3746081 -85758472 + AluSq SINE Alu 1 307 -6 3122 163 82 43 chr17 3746081 3746531 -85758022 + L1MB8 LINE L1 5687 6177 -1 22 0 0 0 chr17 3748586 3748608 -85755945 + AT_rich Low_complexity Low_complexity 1 22 0 333 129 32 0 chr17 3750098 3750160 -85754393 - AluSq SINE Alu 0 302 239 1199 99 0 12 chr17 3750160 3750322 -85754231 - AluSq SINE Alu -153 160 1 248 319 44 44 chr17 3751637 3751750 -85752803 + L2 LINE L2 2981 3093 -179 259 292 15 0 chr17 3751764 3751829 -85752724 + L2 LINE L2 3245 3310 -3 1226 194 116 47 chr17 3751943 3752263 -85752290 - MER2 DNA MER2_type -2 342 1 2182 60 21 32 chr17 3753130 3753415 -85751138 + AluY SINE Alu 14 295 -16 289 274 89 32 chr17 3753544 3753668 -85750885 + L1ME4a LINE L1 5389 5519 -602 2472 72 3 3 chr17 3753717 3754023 -85750530 + AluY SINE Alu 3 308 -3 367 259 147 45 chr17 3754119 3754331 -85750222 + L1ME4a LINE L1 5718 5974 -147 231 36 0 0 chr17 3754331 3754359 -85750194 + (CA)n Simple_repeat Simple_repeat 1 28 0 367 259 147 45 chr17 3754359 3754459 -85750094 + L1ME4a LINE L1 5974 6062 -59 303 140 0 0 chr17 3754861 3754911 -85749642 + (TCC)n Simple_repeat Simple_repeat 2 51 0 2680 213 79 20 chr17 3755177 3755648 -85748905 - MER82 DNA MER2_type -6 647 131 2463 72 0 10 chr17 3755648 3755955 -85748598 + AluY SINE Alu 1 304 -7 2680 213 79 20 chr17 3755955 3756088 -85748465 - MER82 DNA MER2_type -522 131 7 1808 171 0 33 chr17 3756328 3756632 -85747921 - AluJb SINE Alu -14 298 5 2202 101 3 10 chr17 3757045 3757343 -85747210 + AluSg SINE Alu 1 296 -14 2319 98 0 0 chr17 3757813 3758110 -85746443 - AluSx SINE Alu -5 307 11 2865 199 155 57 chr17 3759238 3759431 -85745122 + L1MC4 LINE L1 6813 6986 -1056 2228 74 3 101 chr17 3759431 3759768 -85744785 + AluSc SINE Alu 1 304 -5 2865 199 155 57 chr17 3759768 3759986 -85744567 + L1MC4 LINE L1 6986 7181 -861 826 162 0 29 chr17 3759986 3760122 -85744431 - FLAM_C SINE Alu -1 132 1 2865 199 155 57 chr17 3760122 3760710 -85743843 + L1MC4 LINE L1 7181 7911 -131 330 132 0 0 chr17 3760725 3760778 -85743775 + (CATA)n Simple_repeat Simple_repeat 2 54 0 317 167 50 0 chr17 3760778 3760838 -85743715 - L1MCa LINE L1 -4358 2068 2006 182 114 0 29 chr17 3760839 3760874 -85743679 + (CATA)n Simple_repeat Simple_repeat 4 37 0 322 227 15 0 chr17 3760874 3760940 -85743613 - L1MCa LINE L1 -4363 2063 1997 218 295 16 0 chr17 3761208 3761269 -85743284 - L3 LINE CR1 -5 1572 1511 22 0 0 0 chr17 3761465 3761487 -85743066 + AT_rich Low_complexity Low_complexity 1 22 0 819 243 128 16 chr17 3761590 3761841 -85742712 + L2 LINE L2 3035 3313 0 1592 177 57 13 chr17 3762764 3763163 -85741390 + AluJo SINE Alu 1 412 0 2153 39 19 8 chr17 3763163 3763423 -85741130 + AluY SINE Alu 33 295 -16 286 171 89 0 chr17 3763423 3763539 -85741014 + GA-rich Low_complexity Low_complexity 9 138 0 325 372 16 0 chr17 3764028 3764157 -85740396 + MIR3 SINE MIR 60 190 -18 235 170 0 0 chr17 3764254 3764301 -85740252 - L1MA10 LINE L1 -10 6324 6278 2246 129 0 0 chr17 3764309 3764618 -85739935 - AluSx SINE Alu -3 309 1 882 220 6 6 chr17 3764620 3764802 -85739751 + MER58A DNA MER1_type 43 224 0 234 312 35 28 chr17 3766033 3766174 -85738379 + L1ME4a LINE L1 4561 4702 -1444 383 217 28 32 chr17 3766219 3766398 -85738155 + L1M2 LINE L1 5283 5463 -693 404 296 165 53 chr17 3766575 3766933 -85737620 + L1ME4a LINE L1 5620 6017 -104 2266 83 10 0 chr17 3766994 3767282 -85737271 - AluSc SINE Alu -18 291 1 2474 82 3 0 chr17 3767305 3767610 -85736943 - AluSp SINE Alu -7 306 1 2302 95 7 3 chr17 3767691 3767997 -85736556 + AluY SINE Alu 1 307 -4 1804 84 33 18 chr17 3768144 3768301 -85736252 + L1MA1 LINE L1 6026 6190 -112 2371 109 0 0 chr17 3768301 3768603 -85735950 + AluSx SINE Alu 1 302 -10 1804 84 33 18 chr17 3768603 3768718 -85735835 + L1MA1 LINE L1 6190 6302 0 2401 74 10 3 chr17 3768751 3769060 -85735493 + AluY SINE Alu 1 311 0 21 100 0 0 chr17 3769173 3769243 -85735310 + AT_rich Low_complexity Low_complexity 1 70 0 1925 154 0 10 chr17 3769371 3769663 -85734890 + AluJo SINE Alu 5 293 -19 942 153 35 0 chr17 3769663 3769807 -85734746 - AluJb SINE Alu -162 150 2 810 135 15 60 chr17 3769924 3770057 -85734496 + FLAM_C SINE Alu 1 127 -16 1570 109 9 5 chr17 3770893 3771104 -85733449 + AluSp SINE Alu 1 212 -101 318 130 0 0 chr17 3771104 3771158 -85733395 + FLAM SINE Alu 78 131 -2 285 366 92 7 chr17 3771251 3771404 -85733149 + L3 LINE CR1 355 520 -1057 808 299 267 20 chr17 3771434 3772172 -85732381 + L3 LINE CR1 648 1567 -10 706 274 101 21 chr17 3772283 3772520 -85732033 + MIR SINE MIR 7 262 0 816 285 37 32 chr17 3772666 3772772 -85731781 - MIR SINE MIR -1 261 157 2487 92 0 0 chr17 3772772 3773077 -85731476 + AluSg SINE Alu 1 305 -5 816 285 37 32 chr17 3773077 3773216 -85731337 - MIR SINE MIR -105 157 15 240 242 0 32 chr17 3773222 3773268 -85731285 + MER5B DNA MER1_type 1 46 -132 2181 133 3 0 chr17 3773268 3773577 -85730976 + AluSg SINE Alu 1 310 0 240 242 0 32 chr17 3773577 3773592 -85730961 + MER5B DNA MER1_type 46 60 -118 2195 85 32 0 chr17 3773616 3773899 -85730654 + AluSg SINE Alu 1 292 -18 1767 100 60 8 chr17 3773910 3774160 -85730393 + AluSg SINE Alu 45 307 -3 29 0 0 0 chr17 3774379 3774408 -85730145 + AT_rich Low_complexity Low_complexity 1 29 0 320 282 137 3 chr17 3774409 3774526 -85730027 - MIR SINE MIR -65 143 55 644 278 44 8 chr17 3775033 3775285 -85729268 + MIR SINE MIR 2 262 0 2336 99 0 0 chr17 3775754 3776047 -85728506 - AluSx SINE Alu -19 293 1 208 205 26 0 chr17 3776213 3776252 -85728301 + MIR SINE MIR 40 79 -129 335 200 0 0 chr17 3776823 3776883 -85727670 + L2 LINE L2 3213 3272 0 251 330 22 11 chr17 3776967 3777058 -85727495 - MIR SINE MIR -115 147 56 2257 87 35 0 chr17 3777385 3777674 -85726879 - AluSc SINE Alu -10 299 1 1183 155 0 0 chr17 3778074 3778248 -85726305 + AluJb SINE Alu 125 298 -14 2050 129 0 0 chr17 3778547 3778826 -85725727 + AluSx SINE Alu 6 284 -28 1716 166 8 0 chr17 3779078 3779343 -85725210 - AluJb SINE Alu -45 267 1 1580 186 43 7 chr17 3779632 3779933 -85724620 - AluJo SINE Alu 0 312 1 2140 124 10 3 chr17 3779936 3780242 -85724311 - AluSx SINE Alu -3 309 2 336 331 23 39 chr17 3780577 3780707 -85723846 + MIR SINE MIR 3 130 -132 187 253 203 0 chr17 3780657 3780736 -85723817 + L2 LINE L2 2019 2113 -1201 * 206 220 231 22 chr17 3780877 3780968 -85723585 + L2 LINE L2 3192 3301 -12 1911 100 4 0 chr17 3780968 3781217 -85723336 + AluSp SINE Alu 1 250 -63 946 44 9 0 chr17 3781219 3781352 -85723201 + AluSp/q SINE Alu 169 302 0 251 183 366 0 chr17 3781468 3781539 -85723014 - FLAM_A SINE Alu -23 110 14 591 226 242 0 chr17 3782933 3783119 -85721434 - MIR SINE MIR -2 260 30 184 271 294 0 chr17 3783218 3783303 -85721250 - MIR SINE MIR -63 145 36 1039 121 0 0 chr17 3783441 3783685 -85720868 - FLAM_C SINE Alu 0 244 1 247 254 127 87 chr17 3783687 3783813 -85720740 + MIR3 SINE MIR 58 188 -20 542 208 82 60 chr17 3783843 3784026 -85720527 + MIR SINE MIR 20 206 -56 2206 84 49 0 chr17 3784171 3784456 -85720097 + AluSg SINE Alu 1 299 -11 180 0 0 0 chr17 3784487 3784507 -85720046 + (TG)n Simple_repeat Simple_repeat 2 21 0 627 253 78 34 chr17 3784958 3785247 -85719306 - LTR37B LTR ERV1 0 458 139 2670 43 0 0 chr17 3785259 3785561 -85718992 - AluY SINE Alu -9 302 1 2577 70 0 10 chr17 3785566 3785880 -85718673 - AluY SINE Alu 0 311 1 2143 104 0 7 chr17 3786062 3786349 -85718204 - AluSg1 SINE Alu -23 286 2 328 320 77 37 chr17 3786369 3786641 -85717912 - L2 LINE L2 -1267 2047 1765 2071 135 0 0 chr17 3786673 3786981 -85717572 - AluSx SINE Alu 0 308 1 2169 95 48 7 chr17 3787374 3787668 -85716885 - AluSx SINE Alu -6 306 1 209 271 0 17 chr17 3787695 3787754 -85716799 + CT-rich Low_complexity Low_complexity 1 58 0 2183 90 4 0 chr17 3787755 3788033 -85716520 - AluSg SINE Alu -31 279 1 507 311 167 37 chr17 3788048 3788722 -85715831 + L2 LINE L2 1928 2513 -759 1926 163 10 0 chr17 3788722 3789028 -85715525 - AluJb SINE Alu -1 311 3 507 311 167 37 chr17 3789028 3789552 -85715001 + L2 LINE L2 2513 3272 0 2402 66 0 7 chr17 3789687 3789975 -85714578 + AluSg SINE Alu 10 295 -15 237 33 0 0 chr17 3789976 3790006 -85714547 + (TCTCCC)n Simple_repeat Simple_repeat 2 31 0 10935 30 16 87 chr17 3790006 3791489 -85713064 + SVA Other Other 1 1378 -8 537 115 29 132 chr17 3791502 3791653 -85712900 + L1MC3 LINE L1 5891 6056 -1729 2165 105 0 39 chr17 3791653 3791825 -85712728 - AluSg SINE Alu -16 294 138 2360 70 0 3 chr17 3791825 3792111 -85712442 - AluY SINE Alu -26 285 1 2165 105 0 39 chr17 3792111 3792244 -85712309 - AluSg SINE Alu -172 138 1 537 115 29 132 chr17 3792244 3792506 -85712047 + L1MC3 LINE L1 6056 6343 -1442 2155 104 14 0 chr17 3792506 3792795 -85711758 - AluSx SINE Alu -19 293 1 537 115 29 132 chr17 3792795 3792847 -85711706 + L1MC3 LINE L1 6343 6399 -1386 2596 54 0 0 chr17 3792847 3793143 -85711410 - AluY SINE Alu -15 296 1 537 115 29 132 chr17 3793143 3793160 -85711393 + L1MC3 LINE L1 6399 7783 -2 562 189 9 9 chr17 3793174 3793280 -85711273 + MER5B DNA MER1_type 46 151 -27 207 313 0 0 chr17 3794305 3794353 -85710200 - L2 LINE L2 -18 3254 3207 3904 183 55 31 chr17 3794390 3794469 -85710084 + MER21B LTR ERV1 6 82 -781 2571 56 0 3 chr17 3794469 3794773 -85709780 - AluY SINE Alu -8 303 1 3904 183 55 31 chr17 3794773 3795454 -85709099 + MER21B LTR ERV1 82 790 -73 2391 56 42 0 chr17 3795454 3795740 -85708813 - AluY SINE Alu -13 298 1 3904 183 55 31 chr17 3795740 3795810 -85708743 + MER21B LTR ERV1 790 857 -6 2275 70 20 20 chr17 3795827 3796127 -85708426 + AluSx SINE Alu 5 304 -8 364 284 63 0 chr17 3796141 3796236 -85708317 - MIR SINE MIR -115 147 47 2104 128 0 23 chr17 3799032 3799336 -85705217 - AluJb SINE Alu -15 297 1 2281 105 3 10 chr17 3799613 3799917 -85704636 + AluSq SINE Alu 1 302 -11 713 176 0 17 chr17 3799992 3800111 -85704442 + FLAM_C SINE Alu 2 118 -25 2107 116 17 0 chr17 3800349 3800641 -85703912 - AluJo SINE Alu -9 303 7 2523 55 0 0 chr17 3800652 3800945 -85703608 - AluY SINE Alu -18 293 1 439 141 0 0 chr17 3800945 3801016 -85703537 - MER94 DNA DNA -53 81 11 813 293 112 49 chr17 3803018 3803123 -85701430 - L2 LINE L2 0 3313 3216 2207 91 0 7 chr17 3803123 3803420 -85701133 - AluSq SINE Alu -18 295 1 813 293 112 49 chr17 3803420 3804014 -85700539 - L2 LINE L2 -97 3216 2564 243 263 66 13 chr17 3804926 3805002 -85699551 + L2 LINE L2 3192 3271 -1 2243 90 0 3 chr17 3805051 3805350 -85699203 - AluY SINE Alu -11 300 3 2355 57 37 0 chr17 3805356 3805656 -85698897 - AluY SINE Alu 0 311 1 298 293 40 0 chr17 3806608 3806707 -85697846 - MIR SINE MIR -59 149 47 2500 51 0 0 chr17 3806768 3807064 -85697489 - AluY SINE Alu -15 296 1 2462 64 0 6 chr17 3807701 3808055 -85696498 - AluY SINE Alu 0 352 1 2080 82 89 0 chr17 3808063 3808345 -85696208 - AluSx SINE Alu -5 307 1 181 286 0 0 chr17 3809162 3809204 -85695349 + L2 LINE L2 3272 3313 0 288 380 39 8 chr17 3809969 3810098 -85694455 - L2 LINE L2 0 3272 3140 926 251 25 4 chr17 3810492 3810771 -85693782 + L1MC4 LINE L1 7460 7744 -298 2105 119 0 3 chr17 3810777 3811072 -85693481 - AluSx SINE Alu -18 294 1 1036 96 0 7 chr17 3811072 3811208 -85693345 - AluSq/x SINE Alu -178 135 1 2502 52 0 3 chr17 3811239 3811546 -85693007 + AluY SINE Alu 1 306 -5 528 177 3 9 chr17 3811546 3811670 -85692883 + L1MC4 LINE L1 7670 7785 0 1624 168 45 17 chr17 3811691 3811982 -85692571 - AluJo SINE Alu -13 299 1 185 341 57 23 chr17 3812335 3812423 -85692130 + L2 LINE L2 3168 3258 -14 214 238 0 63 chr17 3813012 3813075 -85691478 - MIR SINE MIR -130 78 20 2419 83 0 0 chr17 3813145 3813457 -85691096 - AluSx SINE Alu 0 312 1 254 316 13 0 chr17 3813964 3814040 -85690513 + G-rich Low_complexity Low_complexity 1 77 0 194 100 0 0 chr17 3814078 3814108 -85690445 - L2 LINE L2 -20 3293 3264 418 270 91 102 chr17 3814179 3814368 -85690185 + L2 LINE L2 2232 2417 -897 191 35 0 35 chr17 3814368 3814397 -85690156 + (CAAAA)n Simple_repeat Simple_repeat 4 31 0 418 270 91 102 chr17 3814397 3814581 -85689972 + L2 LINE L2 2417 2601 -713 208 254 12 23 chr17 3814938 3815035 -85689518 + MIR SINE MIR 60 153 -61 231 36 0 0 chr17 3815180 3815208 -85689345 + (TATG)n Simple_repeat Simple_repeat 1 28 0 2256 106 0 0 chr17 3815210 3815513 -85689040 - AluSq SINE Alu -10 303 1 463 312 60 54 chr17 3815634 3816258 -85688295 + L2 LINE L2 2553 3211 -61 535 263 103 4 chr17 3817110 3817342 -85687211 - MER112 DNA MER1_type -1 259 5 387 286 7 57 chr17 3817538 3817678 -85686875 + MIR SINE MIR 56 188 -74 354 262 23 78 chr17 3818235 3818423 -85686130 - MIR3 SINE MIR -67 141 15 578 190 0 0 chr17 3818513 3818613 -85685940 - MIR SINE MIR -52 210 111 267 351 52 22 chr17 3820020 3820154 -85684399 - L3 LINE CR1 -18 1559 1422 190 119 119 0 chr17 3820154 3820196 -85684357 - L3 LINE CR1 -123 1454 1408 339 352 132 20 chr17 3821375 3821679 -85682874 + L3 LINE CR1 1176 1513 -64 2118 111 0 0 chr17 3822759 3823039 -85681514 + AluSx SINE Alu 11 290 -22 219 286 102 20 chr17 3823512 3823610 -85680943 + MIR SINE MIR 32 137 -71 382 311 107 0 chr17 3824293 3824415 -85680138 + L2 LINE L2 3179 3313 0 181 270 63 16 chr17 3824420 3824483 -85680070 - MIR3 SINE MIR -37 171 106 195 279 211 0 chr17 3824688 3824792 -85679761 - MIR SINE MIR -60 148 23 468 333 92 9 chr17 3824799 3825027 -85679526 + MIR SINE MIR 16 262 0 198 0 0 0 chr17 3825313 3825335 -85679218 + (TG)n Simple_repeat Simple_repeat 2 23 0 252 304 78 48 chr17 3826826 3827056 -85677497 + L2 LINE L2 2246 2482 -832 * 280 317 208 5 chr17 3827050 3827252 -85677301 + L2 LINE L2 2817 3059 -213 1300 267 32 32 chr17 3827566 3828001 -85676552 - L2 LINE L2 -13 3300 2866 315 296 26 17 chr17 3828047 3828162 -85676391 - L2 LINE L2 -189 3083 2968 216 351 53 0 chr17 3828260 3828374 -85676179 - L2 LINE L2 -561 2753 2634 21 0 0 0 chr17 3828872 3828893 -85675660 + GC_rich Low_complexity Low_complexity 1 21 0 22 0 0 0 chr17 3829359 3829381 -85675172 + GC_rich Low_complexity Low_complexity 1 22 0 240 35 0 0 chr17 3829397 3829426 -85675127 + (CCCCG)n Simple_repeat Simple_repeat 4 32 0 30 77 0 0 chr17 3829456 3829521 -85675032 + GC_rich Low_complexity Low_complexity 1 65 0 529 341 38 8 chr17 3830147 3830411 -85674142 + L2 LINE L2 2442 2713 -601 545 278 157 39 chr17 3830461 3830742 -85673811 + L2 LINE L2 2957 3270 -2 887 252 44 53 chr17 3830757 3831078 -85673475 - MLT1J LTR MaLR -191 320 3 296 275 110 16 chr17 3831112 3831171 -85673382 - MIR SINE MIR -28 234 182 800 156 0 30 chr17 3831171 3831306 -85673247 + FLAM_C SINE Alu 3 133 0 296 275 110 16 chr17 3831306 3831415 -85673138 - MIR SINE MIR -80 182 42 316 367 43 31 chr17 3831435 3831759 -85672794 - L2 LINE L2 -1266 2048 1721 781 166 52 140 chr17 3831989 3832063 -85672490 - MER3 DNA MER1_type 0 209 130 2127 83 0 28 chr17 3832063 3832353 -85672200 + AluSx SINE Alu 11 292 -20 781 166 52 140 chr17 3832353 3832507 -85672046 - MER3 DNA MER1_type -79 130 1 299 273 26 0 chr17 3832887 3832964 -85671589 - MIR3 SINE MIR -22 186 108 455 305 43 7 chr17 3833505 3833646 -85670907 - MER5A DNA MER1_type -6 183 38 919 241 50 0 chr17 3833671 3833870 -85670683 + MER3 DNA MER1_type 1 209 0 885 196 25 6 chr17 3835603 3835766 -85668787 - FRAM SINE Alu 0 166 1 2227 99 3 0 chr17 3836218 3836520 -85668033 + AluSx SINE Alu 1 303 -9 2179 120 0 3 chr17 3836570 3836878 -85667675 + AluSx SINE Alu 1 307 -5 360 339 83 32 chr17 3837044 3837262 -85667291 + L2 LINE L2 3084 3312 -1 2448 67 0 0 chr17 3837466 3837766 -85666787 - AluY SINE Alu -11 300 1 633 230 14 0 chr17 3837872 3838020 -85666533 + MER58B DNA MER1_type 190 339 -2 551 360 5 5 chr17 3838214 3838417 -85666136 - MIR SINE MIR -24 238 36 1141 119 11 17 chr17 3838515 3838692 -85665861 - AluSg/x SINE Alu -3 307 132 2139 106 7 7 chr17 3838692 3838995 -85665558 - AluSx SINE Alu -9 303 1 2216 116 0 3 chr17 3838997 3839308 -85665245 - AluSx SINE Alu -2 310 1 2169 95 3 0 chr17 3841992 3842277 -85662276 + AluSq SINE Alu 28 313 0 806 271 50 39 chr17 3842385 3842536 -85662017 + MIR SINE MIR 2 159 -103 2224 82 0 7 chr17 3842536 3842830 -85661723 - AluSc SINE Alu -17 292 1 806 271 50 39 chr17 3842830 3842936 -85661617 + MIR SINE MIR 159 262 0 1692 240 52 26 chr17 3843150 3843608 -85660945 + MLT1K LTR MaLR 4 473 -3 342 0 0 0 chr17 3843690 3843728 -85660825 + (TG)n Simple_repeat Simple_repeat 2 39 0 2133 104 10 10 chr17 3844678 3844986 -85659567 + AluSq SINE Alu 1 308 -5 382 320 51 13 chr17 3845192 3845351 -85659202 + MIR SINE MIR 21 190 -61 2236 82 0 3 chr17 3845435 3845729 -85658824 - AluSg SINE Alu -17 293 1 837 136 8 0 chr17 3845964 3846096 -85658457 + AluSq/x SINE Alu 1 133 -179 245 317 19 10 chr17 3846098 3846202 -85658351 - L2 LINE L2 -12 3301 3197 292 207 0 0 chr17 3846202 3846260 -85658293 - Tigger5 DNA MER2_type 0 2323 2266 238 171 0 0 chr17 3846326 3846367 -85658186 - Tigger5 DNA MER2_type 0 2323 2283 2409 81 0 0 chr17 3846367 3846674 -85657879 - AluSx SINE Alu -5 307 1 219 374 53 16 chr17 3846718 3846905 -85657648 + L2 LINE L2 2334 2527 -787 528 216 0 26 chr17 3847207 3847323 -85657230 + L2 LINE L2 3199 3311 -2 346 309 24 48 chr17 3847357 3847370 -85657183 + Charlie8 DNA MER1_type 69 81 -260 1740 177 0 16 chr17 3847370 3847687 -85656866 - AluJb SINE Alu 0 312 1 222 37 0 0 chr17 3847691 3847718 -85656835 + (TTTC)n Simple_repeat Simple_repeat 2 28 0 346 309 24 48 chr17 3847718 3847867 -85656686 + Charlie8 DNA MER1_type 84 232 -109 1180 249 3 21 chr17 3848242 3848531 -85656022 + MLT1K LTR MaLR 142 425 -163 2381 93 0 0 chr17 3848718 3849030 -85655523 - AluSx SINE Alu 0 312 1 215 88 0 0 chr17 3849425 3849459 -85655094 + L2 LINE L2 3025 3058 -214 191 294 0 0 chr17 3849462 3849513 -85655040 - L3 LINE CR1 -111 1466 1416 2126 101 20 3 chr17 3849530 3849826 -85654727 - AluSx SINE Alu -11 301 1 245 232 29 14 chr17 3850589 3850658 -85653895 + MIR SINE MIR 29 98 -164 205 121 0 0 chr17 3850748 3850781 -85653772 + L3 LINE CR1 1423 1455 -122 364 272 18 9 chr17 3851115 3851229 -85653324 + MIR3 SINE MIR 15 129 -79 386 184 53 35 chr17 3853460 3853574 -85650979 + MIR SINE MIR 37 152 -110 340 244 106 32 chr17 3853756 3853879 -85650674 - MIR3 SINE MIR -21 187 56 354 146 11 34 chr17 3854390 3854479 -85650074 + GA-rich Low_complexity Low_complexity 1 87 0 846 99 10 48 chr17 3854486 3854788 -85649765 + (GGGA)n Simple_repeat Simple_repeat 1 290 0 417 39 0 0 chr17 3854824 3854875 -85649678 + (TCC)n Simple_repeat Simple_repeat 1 51 0 407 229 48 9 chr17 3855308 3855413 -85649140 - MIR SINE MIR -79 183 75 1782 169 0 43 chr17 3856111 3856255 -85648298 + AluJb SINE Alu 1 150 -162 1731 153 3 3 chr17 3856255 3856566 -85647987 + AluSq SINE Alu 4 314 0 1782 169 0 43 chr17 3856566 3856746 -85647807 + AluJb SINE Alu 150 312 0 2383 87 0 3 chr17 3856904 3857252 -85647301 - AluSg SINE Alu 0 347 1 307 250 0 22 chr17 3857264 3857284 -85647269 - L1MA10 LINE L1 0 6334 6315 674 314 98 15 chr17 3857284 3857609 -85646944 - L1ME1 LINE L1 -9 6157 5806 194 246 0 49 chr17 3858153 3858214 -85646339 + MIR SINE MIR 88 145 -63 239 319 0 0 chr17 3858439 3858508 -85646045 + MER45A DNA AcHobo 5 73 -105 247 286 0 0 chr17 3858697 3858760 -85645793 - L1ME3 LINE L1 -7 6155 6093 2359 92 0 0 chr17 3858764 3859069 -85645484 - AluSx SINE Alu -7 305 1 382 202 61 0 chr17 3859075 3859174 -85645379 + MER45A DNA AcHobo 74 178 0 1705 122 54 14 chr17 3859655 3859959 -85644594 + AluSx SINE Alu 1 312 0 2148 90 4 0 chr17 3862990 3863268 -85641285 - AluSx SINE Alu -33 279 1 252 199 14 96 chr17 3866551 3866697 -85637856 + (CCCCAG)n Simple_repeat Simple_repeat 1 134 0 2183 80 28 0 chr17 3867265 3867554 -85636999 + AluSx SINE Alu 1 297 -15 2588 46 0 0 chr17 3867914 3868220 -85636333 - AluY SINE Alu -5 306 1 2073 110 0 0 chr17 3868517 3868843 -85635710 - AluSx SINE Alu 0 326 1 1754 169 0 3 chr17 3868843 3869133 -85635420 - AluJb SINE Alu -17 295 7 2346 50 4 0 chr17 3869399 3869701 -85634852 + AluSx SINE Alu 1 303 0 2241 90 3 0 chr17 3869857 3870156 -85634397 + AluY SINE Alu 3 302 -9 2320 89 0 0 chr17 3870312 3870616 -85633937 - AluSx SINE Alu -1 311 8 1594 176 53 7 chr17 3870626 3870910 -85633643 - AluJb SINE Alu -15 297 1 2221 106 3 0 chr17 3870919 3871222 -85633331 - AluSx SINE Alu -8 304 1 462 228 139 15 chr17 3871726 3871928 -85632625 + MLT1K LTR MaLR 30 256 -332 2330 76 0 0 chr17 3871935 3872226 -85632327 - AluSx SINE Alu -10 302 12 664 133 20 0 chr17 3872226 3872324 -85632229 - AluS SINE Alu -213 100 1 236 277 38 107 chr17 3872324 3872483 -85632070 + MLT1K LTR MaLR 249 396 -192 339 25 0 0 chr17 3873121 3873161 -85631392 + (CA)n Simple_repeat Simple_repeat 2 41 0 214 269 32 11 chr17 3873404 3873497 -85631056 + (CA)n Simple_repeat Simple_repeat 1 95 0 205 370 11 0 chr17 3874280 3874372 -85630181 + G-rich Low_complexity Low_complexity 3 95 0 2136 108 0 0 chr17 3874551 3874839 -85629714 + AluSx SINE Alu 1 288 -24 2099 110 31 0 chr17 3874946 3875236 -85629317 - AluSx SINE Alu -13 299 1 1889 165 3 0 chr17 3875285 3875582 -85628971 + AluJo SINE Alu 1 298 -14 798 233 75 43 chr17 3875806 3875906 -85628647 + L1ME2 LINE L1 5724 5819 -345 2440 69 0 7 chr17 3875906 3876212 -85628341 + AluSc SINE Alu 1 304 -5 798 233 75 43 chr17 3876212 3876433 -85628120 + L1ME2 LINE L1 5819 6055 -109 213 65 0 0 chr17 3876433 3876464 -85628089 + (T)n Simple_repeat Simple_repeat 1 31 0 665 106 0 0 chr17 3876474 3876559 -85627994 - AluJ/FLAM SINE Alu -226 86 2 383 286 0 0 chr17 3876566 3876671 -85627882 + L1ME2 LINE L1 6050 6154 -10 2217 106 0 0 chr17 3876906 3877207 -85627346 - AluSx SINE Alu -11 301 1 1778 116 64 4 chr17 3879405 3879706 -85624847 + AluSx SINE Alu 1 317 0 504 350 86 0 chr17 3880360 3880663 -85623890 + L2 LINE L2 2439 2767 -547 25 65 0 0 chr17 3881393 3881439 -85623114 + GC_rich Low_complexity Low_complexity 1 46 0 224 255 255 20 chr17 3881829 3881931 -85622622 + MIR SINE MIR 20 145 -63 270 229 55 73 chr17 3882067 3882176 -85622377 - L3 LINE CR1 -101 1476 1370 2213 88 14 7 chr17 3882365 3882661 -85621892 + AluSc SINE Alu 1 298 -11 2030 107 3 27 chr17 3882669 3882969 -85621584 + AluSx SINE Alu 1 293 -19 437 313 78 6 chr17 3884341 3884520 -85620033 + L2 LINE L2 3094 3285 -28 908 142 15 0 chr17 3884984 3885118 -85619435 - AluJo SINE Alu -176 136 1 2329 98 3 0 chr17 3885246 3885553 -85619000 + AluSx SINE Alu 1 308 -4 871 205 35 57 chr17 3885970 3886199 -85618354 + MIR SINE MIR 39 262 0 1887 131 0 0 chr17 3886279 3886546 -85618007 + AluSq SINE Alu 1 267 -46 2263 70 0 7 chr17 3886562 3886847 -85617706 - AluSq SINE Alu -14 299 17 825 124 0 8 chr17 3887463 3887631 -85616922 + AluSg/x SINE Alu 175 312 0 753 152 42 55 chr17 3888356 3888495 -85616058 + MER5A DNA MER1_type 8 146 -43 1846 98 58 4 chr17 3888495 3888769 -85615784 - AluSx SINE Alu -23 289 1 753 152 42 55 chr17 3888769 3888794 -85615759 + MER5A DNA MER1_type 146 170 -19 956 187 36 67 chr17 3888933 3888993 -85615560 + MER20 DNA MER1_type 1 61 -158 1834 161 0 7 chr17 3888993 3889291 -85615262 - AluJo SINE Alu -16 296 1 956 187 36 67 chr17 3889291 3889455 -85615098 + MER20 DNA MER1_type 61 218 -1 274 242 30 106 chr17 3890346 3890478 -85614075 - MIR3 SINE MIR -10 198 77 2373 61 10 0 chr17 3890897 3891193 -85613360 - AluSg SINE Alu -11 299 1 226 344 23 42 chr17 3891212 3891441 -85613112 - MIR SINE MIR -8 254 30 216 310 56 0 chr17 3891510 3891581 -85612972 + MER5A DNA MER1_type 9 83 -106 2232 81 0 0 chr17 3892269 3892581 -85611972 - AluSx SINE Alu 0 312 1 366 184 11 35 chr17 3892661 3892748 -85611805 + MLT1I LTR MaLR 3 87 -322 553 247 117 7 chr17 3892823 3892977 -85611576 + MER3 DNA MER1_type 4 127 -82 494 286 47 52 chr17 3892988 3893201 -85611352 + MLT1I LTR MaLR 197 408 -1 598 290 65 9 chr17 3893540 3893754 -85610799 - MIR SINE MIR -30 232 7 693 288 64 0 chr17 3894462 3894681 -85609872 + MIR SINE MIR 8 240 -22 400 221 106 35 chr17 3894701 3894814 -85609739 + L2 LINE L2 3191 3311 -2 257 370 31 0 chr17 3894812 3894939 -85609614 + L2 LINE L2 2715 2845 -469 * 367 148 0 0 chr17 3895007 3895068 -85609485 - L1MA7 LINE L1 -3 6288 6228 416 230 29 10 chr17 3895095 3895199 -85609354 - L1MC4 LINE L1 -1339 6983 1996 382 246 0 26 chr17 3895178 3895293 -85609260 - L1MC4 LINE L1 -1339 6983 1995 * 320 259 25 25 chr17 3895223 3895298 -85609255 + L1MC3 LINE L1 6571 6646 -1134 * 2009 113 3 27 chr17 3895298 3895598 -85608955 - AluSx SINE Alu -19 293 1 340 367 136 0 chr17 3897016 3897280 -85607273 + L1MC/D LINE L1 5366 5665 -2143 506 337 16 11 chr17 3898165 3898349 -85606204 - MIR SINE MIR -55 207 23 253 260 0 14 chr17 3898601 3898674 -85605879 - MIR SINE MIR -122 140 69 * 945 243 20 0 chr17 3898645 3898847 -85605706 + MIR SINE MIR 57 262 0 39 22 0 0 chr17 3900523 3900569 -85603984 + GC_rich Low_complexity Low_complexity 1 46 0 26 50 0 0 chr17 3900757 3900797 -85603756 + GC_rich Low_complexity Low_complexity 1 40 0 25 0 0 0 chr17 3900834 3900859 -85603694 + GC_rich Low_complexity Low_complexity 1 25 0 33 0 0 0 chr17 3900883 3900916 -85603637 + GC_rich Low_complexity Low_complexity 1 33 0 262 0 0 0 chr17 3902249 3902278 -85602275 + (TTA)n Simple_repeat Simple_repeat 2 180 0 2018 108 3 46 chr17 3902278 3902601 -85601952 - AluSx SINE Alu -3 309 1 1675 149 0 81 chr17 3902604 3902925 -85601628 - AluJb SINE Alu -17 295 1 200 379 47 18 chr17 3902933 3903102 -85601451 - L3 LINE CR1 -818 759 586 1604 83 0 0 chr17 3903806 3904048 -85600505 - AluSg/x SINE Alu 0 320 79 629 139 0 170 chr17 3904049 3904214 -85600339 - AluSq/x SINE Alu -175 137 1 231 344 122 27 chr17 3904327 3904548 -85600005 - L2 LINE L2 -429 2885 2644 254 198 176 11 chr17 3904661 3904752 -85599801 - MIR SINE MIR -18 244 139 245 200 123 15 chr17 3904752 3904817 -85599736 + MER45B DNA AcHobo 1 72 -968 746 190 0 7 chr17 3904818 3904955 -85599598 - FLAM_A SINE Alu -6 136 1 4354 195 34 35 chr17 3904955 3904995 -85599558 + MER45B DNA AcHobo 63 102 -1479 2279 85 0 3 chr17 3904995 3905300 -85599253 - AluSx SINE Alu -8 304 1 4354 195 34 35 chr17 3905300 3906061 -85598492 + MER45B DNA AcHobo 102 862 -719 2191 93 0 26 chr17 3906061 3906371 -85598182 + AluSx SINE Alu 1 302 -10 4354 195 34 35 chr17 3906371 3906474 -85598079 + MER45B DNA AcHobo 862 969 -612 1568 176 3 37 chr17 3906474 3906797 -85597756 - AluJo SINE Alu 0 312 1 4354 195 34 35 chr17 3906797 3906868 -85597685 + MER45B DNA AcHobo 969 1039 -1 258 283 186 18 chr17 3906869 3906982 -85597571 - MIR SINE MIR -116 146 15 199 302 39 31 chr17 3907520 3907649 -85596904 - MIR3 SINE MIR -28 180 51 2277 96 0 0 chr17 3907989 3908292 -85596261 + AluSq SINE Alu 1 303 -10 1726 149 33 10 chr17 3908301 3908602 -85595951 + AluJo SINE Alu 5 312 0 231 225 225 17 chr17 3908772 3908892 -85595661 - L2 LINE L2 -192 3080 2936 324 261 85 8 chr17 3910211 3910341 -85594212 + L2 LINE L2 2876 3015 -257 227 380 52 18 chr17 3911056 3911285 -85593268 + L2 LINE L2 2826 3062 -210 205 359 19 28 chr17 3911465 3911571 -85592982 + L2 LINE L2 3208 3312 -1 2175 107 3 10 chr17 3911741 3911914 -85592639 - AluSq SINE Alu -6 307 135 2471 68 0 0 chr17 3911914 3912221 -85592332 - AluY SINE Alu -4 307 1 2175 107 3 10 chr17 3912221 3912356 -85592197 - AluSq SINE Alu -178 135 1 261 284 34 23 chr17 3914062 3914150 -85590403 - MIR SINE MIR -170 92 4 348 286 95 8 chr17 3914349 3914479 -85590074 + MIR SINE MIR 42 181 -60 2217 79 3 13 chr17 3914504 3914809 -85589744 + AluSx SINE Alu 1 302 -10 615 244 78 0 chr17 3915446 3915626 -85588927 + MIR SINE MIR 9 202 -60 694 252 172 64 chr17 3915707 3916084 -85588469 + MLT1L LTR MaLR 122 539 -76 866 230 0 0 chr17 3916085 3916263 -85588290 - AluSg/x SINE Alu -1 311 134 2199 106 0 3 chr17 3916287 3916589 -85587964 + AluSg SINE Alu 1 301 -9 1540 142 0 4 chr17 3916747 3916979 -85587574 - AluJo SINE Alu -81 231 1 588 261 6 24 chr17 3916979 3917144 -85587409 + MLT1K LTR MaLR 421 582 -6 301 276 38 0 chr17 3918036 3918141 -85586412 + MIR3 SINE MIR 85 193 -15 282 29 0 0 chr17 3918566 3918601 -85585952 + (CAAAA)n Simple_repeat Simple_repeat 3 37 0 2159 107 0 3 chr17 3918723 3919022 -85585531 - AluSx SINE Alu -14 298 1 2063 93 7 0 chr17 3919947 3920259 -85584294 + AluY SINE Alu 1 314 0 436 282 83 33 chr17 3920470 3920651 -85583902 + MLT1K LTR MaLR 396 585 -3 3673 105 57 0 chr17 3921156 3921316 -85583237 - MER41A LTR ERV1 0 554 405 2205 111 7 0 chr17 3921316 3921623 -85582930 - AluSg SINE Alu -1 309 1 3673 105 57 0 chr17 3921623 3921985 -85582568 - MER41A LTR ERV1 -149 405 2 2226 96 3 0 chr17 3922211 3922514 -85582039 - AluSp SINE Alu -9 304 1 700 177 51 162 chr17 3927314 3927843 -85576710 + Charlie1 DNA MER1_type 5 2755 -6 333 276 82 18 chr17 3928413 3928583 -85575970 + MIR3 SINE MIR 23 203 -5 996 174 38 136 chr17 3929359 3929675 -85574878 + AluY SINE Alu 11 295 -16 2186 104 0 19 chr17 3929746 3930062 -85574491 + AluSg SINE Alu 1 310 0 930 192 6 24 chr17 3930252 3930419 -85574134 + FRAM SINE Alu 3 166 0 1733 166 0 7 chr17 3930427 3930722 -85573831 + AluJb SINE Alu 1 293 -19 644 276 165 11 chr17 3931758 3932200 -85572353 + L1ME4a LINE L1 4061 4570 -1576 493 133 0 0 chr17 3932200 3932275 -85572278 + AluJ/FRAM SINE Alu 226 300 -12 581 309 76 12 chr17 3932279 3932609 -85571944 + L1ME4a LINE L1 4918 5268 -878 196 348 0 14 chr17 3933615 3933684 -85570869 - MIR SINE MIR -125 83 16 410 209 23 0 chr17 3934008 3934094 -85570459 - L2 LINE L2 -8 3264 3177 2500 38 0 0 chr17 3936404 3936695 -85567858 + AluY SINE Alu 1 291 -20 550 242 242 15 chr17 3936917 3937115 -85567438 - MIR SINE MIR -6 256 14 1068 168 89 5 chr17 3937430 3937632 -85566921 - AluJo SINE Alu -1 311 93 186 326 141 44 chr17 3938577 3938939 -85565614 - L2 LINE L2 -10 3262 2866 2151 93 3 0 chr17 3939505 3939794 -85564759 + AluSx SINE Alu 1 290 -22 181 205 26 0 chr17 3940174 3940213 -85564340 + L3 LINE CR1 1344 1383 -194 36 53 0 0 chr17 3942239 3942296 -85562257 + AT_rich Low_complexity Low_complexity 1 57 0 726 159 0 51 chr17 3942296 3942434 -85562119 - FLAM_A SINE Alu -1 132 2 1322 153 55 0 chr17 3942457 3942693 -85561860 - MER57A LTR ERV1 -25 378 130 397 276 173 50 chr17 3942715 3943018 -85561535 + MLT1J LTR MaLR 64 429 -82 5552 50 7 29 chr17 3943018 3943745 -85560808 - SVA Other Other 0 1386 676 397 276 173 50 chr17 3943745 3943840 -85560713 + MLT1J LTR MaLR 429 511 0 503 132 0 0 chr17 3944888 3944964 -85559589 - AluJo SINE Alu -11 301 226 1348 151 27 0 chr17 3945177 3945396 -85559157 - AluJo SINE Alu -87 225 1 273 287 20 10 chr17 3946309 3946410 -85558143 + L1ME4a LINE L1 5544 5645 -476 328 316 38 30 chr17 3946591 3946724 -85557829 + L1ME4a LINE L1 5935 6068 -53 216 328 119 6 chr17 3946745 3946922 -85557631 - L3b LINE CR1 -114 1469 1273 192 125 0 0 chr17 3947663 3947695 -85556858 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 280 358 90 15 chr17 3947721 3948030 -85556523 + L2 LINE L2 2717 3056 -257 303 306 124 8 chr17 3948060 3948181 -85556372 + L2 LINE L2 3136 3270 -2 1514 187 0 39 chr17 3948297 3948602 -85555951 + AluJo SINE Alu 1 293 -19 36 53 0 0 chr17 3950612 3950669 -85553884 + AT_rich Low_complexity Low_complexity 1 57 0 726 159 0 51 chr17 3950669 3950807 -85553746 - FLAM_A SINE Alu -1 132 2 1322 153 55 0 chr17 3950830 3951066 -85553487 - MER57A LTR ERV1 -25 378 130 476 287 178 21 chr17 3951088 3951475 -85553078 + MLT1J LTR MaLR 64 511 0 503 132 0 0 chr17 3952523 3952599 -85551954 - AluJo SINE Alu -11 301 226 1416 151 27 0 chr17 3952812 3953031 -85551522 - AluJo SINE Alu -87 225 1 265 287 20 10 chr17 3953944 3954045 -85550508 + L1ME LINE L1 5544 5645 -476 186 299 124 11 chr17 3954380 3954557 -85549996 - L3b LINE CR1 -114 1469 1273 192 125 0 0 chr17 3955298 3955330 -85549223 + (TTCA)n Simple_repeat Simple_repeat 1 32 0 207 329 117 21 chr17 3955356 3955665 -85548888 + L2 LINE L2 2717 3056 -257 272 306 124 8 chr17 3955695 3955816 -85548737 + L2 LINE L2 3136 3270 -2 1560 190 0 39 chr17 3955932 3956237 -85548316 + AluJo SINE Alu 1 293 -19 2221 126 0 3 chr17 3956581 3956891 -85547662 - AluSx SINE Alu -3 309 1 2175 126 17 0 chr17 3957797 3958091 -85546462 + AluSx SINE Alu 1 299 -13 1608 254 44 45 chr17 3958103 3958630 -85545923 + L1MEc LINE L1 35 560 -5836 779 273 89 61 chr17 3958653 3958905 -85545648 + L1MEc LINE L1 1277 1520 -4876 2241 111 7 3 chr17 3958905 3959212 -85545341 - AluSq SINE Alu -5 308 1 779 273 89 61 chr17 3959212 3959519 -85545034 + L1MEc LINE L1 1520 1852 -4544 532 172 35 52 chr17 3959553 3959669 -85544884 - FLAM_C SINE Alu -18 115 2 2418 91 3 0 chr17 3959679 3959987 -85544566 - AluSq SINE Alu -4 309 1 1381 144 12 37 chr17 3959987 3960230 -85544323 - AluJo SINE Alu -10 302 66 501 202 0 40 chr17 3960248 3960347 -85544206 - FLAM_C SINE Alu -19 124 30 285 172 129 32 chr17 3960358 3960451 -85544102 - L1MEc LINE L1 -4258 2138 2037 745 212 109 0 chr17 3960457 3960650 -85543903 - L1MEc LINE L1 -4320 2076 1863 2016 133 7 7 chr17 3960659 3960959 -85543594 + AluSx SINE Alu 1 300 -12 633 150 150 33 chr17 3960962 3961115 -85543438 + L1MEc LINE L1 2229 2399 -3997 426 218 51 0 chr17 3961201 3961279 -85543274 - MER2 DNA MER2_type -262 83 2 1730 234 10 103 chr17 3961282 3962009 -85542544 + L1MEc LINE L1 2367 3160 -3055 2250 90 7 0 chr17 3962009 3962297 -85542256 + AluSq SINE Alu 22 311 -2 1730 234 10 103 chr17 3962297 3962308 -85542245 + L1MEc LINE L1 3160 3170 -3045 791 178 23 0 chr17 3962308 3962437 -85542116 + FLAM_C SINE Alu 2 133 0 1730 234 10 103 chr17 3962437 3962658 -85541895 + L1MEc LINE L1 3170 3362 -2853 272 157 0 39 chr17 3962766 3962817 -85541736 + Tigger5 DNA MER2_type 7 55 -2268 * 378 173 13 40 chr17 3962784 3962859 -85541694 + Tigger5 DNA MER2_type 2251 2323 0 308 111 0 0 chr17 3962876 3962921 -85541632 + L1ME3A LINE L1 4564 4608 -1538 725 136 183 8 chr17 3962934 3963127 -85541426 - AluJo SINE Alu -24 288 2 429 214 103 0 chr17 3963171 3963288 -85541265 + L1ME3A LINE L1 4633 4761 -1385 1047 107 0 0 chr17 3963289 3963420 -85541133 + AluSq/x SINE Alu 1 131 -181 2155 119 0 3 chr17 3963425 3963758 -85540795 + AluSx SINE Alu 1 332 0 756 220 62 5 chr17 3963759 3963968 -85540585 + L1ME3A LINE L1 4752 4972 -1174 2283 112 0 10 chr17 3965739 3966052 -85538501 - AluSg SINE Alu 0 310 1 268 209 80 92 chr17 3966951 3967114 -85537439 - L1ME4a LINE L1 -27 6094 5934 2033 139 0 7 chr17 3967118 3967412 -85537141 + AluJb SINE Alu 1 292 -20 186 191 0 0 chr17 3967416 3967458 -85537095 + (TATG)n Simple_repeat Simple_repeat 2 43 0 25 0 0 0 chr17 3967461 3967486 -85537067 + AT_rich Low_complexity Low_complexity 1 25 0 1915 89 0 0 chr17 3968242 3968478 -85536075 + AluSq SINE Alu 23 258 -55 244 279 0 0 chr17 3968555 3968616 -85535937 + L1MC4 LINE L1 6460 6520 -1522 627 215 59 59 chr17 3968631 3968850 -85535703 - MER20 DNA MER1_type 0 219 1 2335 74 13 3 chr17 3968856 3969154 -85535399 + AluSq SINE Alu 1 301 -12 234 0 0 0 chr17 3969181 3969207 -85535346 + (CA)n Simple_repeat Simple_repeat 2 27 0 1250 200 216 0 chr17 3969245 3969550 -85535003 + L1MC4 LINE L1 6719 7089 -953 2074 234 55 26 chr17 3969551 3969953 -85534600 + L1MC4 LINE L1 7243 7671 -371 1717 188 10 10 chr17 3969953 3970262 -85534291 - AluJo SINE Alu -3 309 1 2074 234 55 26 chr17 3970262 3970475 -85534078 + L1MC4 LINE L1 7671 7876 -166 894 241 89 59 chr17 3970533 3970902 -85533651 + L1ME3A LINE L1 5492 5880 -290 2073 106 7 3 chr17 3970902 3971213 -85533340 + AluSx SINE Alu 1 312 0 894 241 89 59 chr17 3971213 3971306 -85533247 + L1ME3A LINE L1 5880 5969 -201 291 50 0 0 chr17 3971303 3971343 -85533210 - L1M4 LINE L1 -843 5303 5264 * 1896 132 7 7 chr17 3971559 3971872 -85532681 + AluSx SINE Alu 1 313 0 2633 46 0 3 chr17 3972017 3972320 -85532233 - AluY SINE Alu -9 302 1 716 229 171 28 chr17 3974150 3974577 -85529976 + L1MC4 LINE L1 7555 8042 0 2383 88 0 10 chr17 3975051 3975358 -85529195 - AluSx SINE Alu -8 304 1 417 254 131 60 chr17 3975390 3975673 -85528880 + L2 LINE L2 3010 3312 -1 487 193 0 96 chr17 3976261 3976396 -85528157 + L2 LINE L2 3132 3253 -19 2339 110 0 0 chr17 3976885 3977193 -85527360 - AluSc SINE Alu -1 308 1 2292 96 3 0 chr17 3977248 3977539 -85527014 + AluSx SINE Alu 1 292 -20 2442 97 0 0 chr17 3978569 3978879 -85525674 - AluY SINE Alu -1 310 1 1003 209 18 65 chr17 3979924 3980115 -85524438 + L1MC4 LINE L1 6820 7018 -1024 1896 166 7 0 chr17 3980115 3980411 -85524142 + AluJb SINE Alu 1 298 -14 2237 108 3 0 chr17 3980413 3980709 -85523844 + AluY SINE Alu 1 297 -14 1003 209 18 65 chr17 3980709 3980792 -85523761 + L1MC4 LINE L1 7019 7084 -958 1904 94 50 43 chr17 3981465 3981764 -85522789 - AluSg SINE Alu -9 301 1 659 184 98 90 chr17 3981853 3981982 -85522571 - MIR SINE MIR -25 237 103 1935 136 7 4 chr17 3981982 3982291 -85522262 + AluJb SINE Alu 1 310 0 659 184 98 90 chr17 3982291 3982394 -85522159 - MIR SINE MIR -159 103 2 22 0 0 0 chr17 3983279 3983301 -85521252 + AT_rich Low_complexity Low_complexity 1 22 0 318 261 28 115 chr17 3984051 3984180 -85520373 + L1MC5 LINE L1 7651 7743 -218 2181 101 17 0 chr17 3984180 3984468 -85520085 - AluSx SINE Alu -19 293 1 318 261 28 115 chr17 3984468 3984625 -85519928 + L1MC5 LINE L1 7743 7912 -49 34 0 0 0 chr17 3985302 3985336 -85519217 + AT_rich Low_complexity Low_complexity 1 34 0 1966 153 0 0 chr17 3985337 3985619 -85518934 + AluSx SINE Alu 1 282 -30 236 376 76 27 chr17 3987019 3987428 -85517125 - L2 LINE L2 -18 3254 2826 203 191 85 0 chr17 3988087 3988134 -85516419 + L2 LINE L2 3263 3313 0 1530 142 46 4 chr17 3988551 3988811 -85515742 - MER1B DNA MER1_type 0 339 69 206 217 0 0 chr17 3989360 3989406 -85515147 - L2 LINE L2 -5 3308 3263 234 0 0 0 chr17 3989420 3989446 -85515107 + (TTA)n Simple_repeat Simple_repeat 2 27 0 221 231 92 15 chr17 3989486 3989551 -85515002 + MIR SINE MIR 25 94 -114 299 200 0 57 chr17 3989557 3989627 -85514926 - 5S rRNA rRNA -53 68 3 872 222 17 26 chr17 3990461 3990691 -85513862 - MIR SINE MIR -27 235 8 1766 182 7 3 chr17 3991345 3991642 -85512911 + AluJb SINE Alu 1 298 -14 589 192 90 30 chr17 3991716 3991883 -85512670 + L1ME4a LINE L1 5944 6120 -1 211 281 0 0 chr17 3992318 3992375 -85512178 - MIR SINE MIR -33 229 173 2775 281 142 50 chr17 3992384 3993035 -85511518 + L2 LINE L2 602 1191 -2122 1760 145 57 3 chr17 3993035 3993318 -85511235 + AluSx SINE Alu 1 298 -14 2775 281 142 50 chr17 3993318 3995159 -85509394 + L2 LINE L2 1191 3309 -4 487 231 130 0 chr17 3996061 3996169 -85508384 + FLAM_C SINE Alu 2 123 -20 1591 164 6 68 chr17 3996320 3996481 -85508072 - AluJb SINE Alu -16 296 162 2327 107 0 0 chr17 3996481 3996780 -85507773 - AluSx SINE Alu -13 299 1 1591 164 6 68 chr17 3996780 3996929 -85507624 - AluJb SINE Alu -150 162 5 1233 63 25 0 chr17 3997627 3997786 -85506767 + L1PA5 LINE L1 5989 6151 -3 1828 147 33 16 chr17 3997874 3998181 -85506372 + AluJb SINE Alu 1 312 0 686 226 96 26 chr17 3998307 3998577 -85505976 - L1MC5 LINE L1 -54 7907 7619 1606 137 0 113 chr17 3998601 3998936 -85505617 + AluJo SINE Alu 1 297 -5 194 320 40 0 chr17 3999512 3999587 -85504966 - MIR SINE MIR -77 131 54 24 77 0 0 chr17 4000249 4000301 -85504252 + AT_rich Low_complexity Low_complexity 1 52 0 294 212 47 0 chr17 4000311 4000396 -85504157 + L1ME4a LINE L1 5831 5919 -202 241 231 0 0 chr17 4000429 4000468 -85504085 + AluJo SINE Alu 2 40 -263 581 131 0 47 chr17 4000471 4000578 -85503975 - AluJo/FRAM SINE Alu -2 310 209 1618 182 14 0 chr17 4000578 4000853 -85503700 + AluJo SINE Alu 27 305 -7 207 167 0 0 chr17 4000862 4000904 -85503649 + (CATATA)n Simple_repeat Simple_repeat 2 43 0 2116 104 7 33 chr17 4001041 4001340 -85503213 - AluSq SINE Alu -22 291 1 315 316 43 0 chr17 4001454 4001571 -85502982 - L2 LINE L2 -8 3305 3184 2329 98 3 0 chr17 4002302 4002609 -85501944 + AluSx SINE Alu 1 308 -4 310 333 0 0 chr17 4003052 4003148 -85501405 - MIR SINE MIR -66 142 47 24 0 0 0 chr17 4003337 4003361 -85501192 + AT_rich Low_complexity Low_complexity 1 24 0 221 333 15 0 chr17 4003975 4004041 -85500512 - L2 LINE L2 -217 3055 2989 306 350 14 0 chr17 4004111 4004251 -85500302 - L2 LINE L2 -457 2857 2716 247 295 122 51 chr17 4005149 4005305 -85499248 - L2 LINE L2 -2 3270 3104 1705 161 0 29 chr17 4006182 4006492 -85498061 - AluJo SINE Alu -11 301 1 567 195 88 0 chr17 4007580 4007693 -85496860 - MER58A DNA MER1_type 0 160 38 2337 43 3 13 chr17 4008886 4009187 -85495366 - AluY SINE Alu -13 298 1 1894 137 0 29 chr17 4009208 4009523 -85495030 - AluSx SINE Alu -6 306 1 445 238 32 56 chr17 4009523 4009649 -85494904 + MER5B DNA MER1_type 5 127 -51 193 335 129 13 chr17 4012868 4013023 -85491530 - MIR SINE MIR -70 192 20 1004 182 9 40 chr17 4014284 4014509 -85490044 - AluJo SINE Alu -94 218 1 203 146 24 0 chr17 4014756 4014797 -85489756 + CT-rich Low_complexity Low_complexity 3 44 0 1134 101 24 0 chr17 4015713 4015881 -85488672 + AluSc SINE Alu 132 303 -6 237 273 114 45 chr17 4015881 4016013 -85488540 - MER112 DNA MER1_type -115 145 5 294 234 183 15 chr17 4016227 4016364 -85488189 + L3 LINE CR1 1346 1505 -72 1781 155 7 0 chr17 4016382 4016672 -85487881 - AluSx SINE Alu -19 293 2 581 265 155 0 chr17 4017099 4017299 -85487254 + MIR SINE MIR 6 236 -26 334 308 67 10 chr17 4017369 4017473 -85487080 + L2 LINE L2 3123 3232 -40 1602 181 0 37 chr17 4017706 4018027 -85486526 + AluSx SINE Alu 1 309 -3 1468 174 31 14 chr17 4018042 4018335 -85486218 - AluJo SINE Alu -14 298 1 678 215 117 27 chr17 4018408 4018631 -85485922 + L1MC5 LINE L1 7688 7930 -31 * 1809 254 53 30 chr17 4018629 4019166 -85485387 + L1PA14 LINE L1 405 928 -5226 1937 83 12 0 chr17 4019166 4019418 -85485135 - AluSc SINE Alu -54 255 1 541 156 37 18 chr17 4019427 4019536 -85485017 - L1MB7 LINE L1 0 6184 6074 1809 254 53 30 chr17 4019536 4019868 -85484685 + L1PA14 LINE L1 935 5780 -374 1579 107 0 0 chr17 4019908 4020124 -85484429 + AluSg SINE Alu 1 216 -94 2509 92 51 0 chr17 4020141 4020512 -85484041 + L1PA14 LINE L1 5769 6158 -3 2067 132 3 0 chr17 4020523 4020834 -85483719 + AluSx SINE Alu 1 312 0 2773 234 88 67 chr17 4020834 4021848 -85482705 + HAL1 LINE L1 1060 2107 -400 1870 155 3 3 chr17 4021848 4022151 -85482402 + AluJb SINE Alu 1 303 -9 2773 234 88 67 chr17 4022151 4022383 -85482170 + HAL1 LINE L1 2107 2333 -174 201 220 0 20 chr17 4022673 4022723 -85481830 - L2 LINE L2 -279 2993 2945 181 260 0 20 chr17 4022740 4022790 -85481763 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 4022807 4022857 -85481696 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 4022874 4022924 -85481629 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 4022941 4022991 -85481562 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 4023008 4023058 -85481495 - L2 LINE L2 -279 2993 2945 201 220 0 20 chr17 4023075 4023125 -85481428 - L2 LINE L2 -279 2993 2945 180 260 0 20 chr17 4023142 4023192 -85481361 - L2 LINE L2 -279 2993 2945 180 260 0 20 chr17 4023208 4023258 -85481295 - L2 LINE L2 -279 2993 2945 410 0 20 0 chr17 4025083 4025133 -85479420 + (TG)n Simple_repeat Simple_repeat 2 52 0 247 200 20 0 chr17 4025133 4025183 -85479370 + (CATA)n Simple_repeat Simple_repeat 2 52 0 220 289 141 74 chr17 4025686 4025732 -85478821 - MIR3 SINE MIR -62 146 104 2181 97 3 0 chr17 4025732 4026030 -85478523 + AluSg SINE Alu 3 301 -9 220 289 141 74 chr17 4026030 4026118 -85478435 - MIR3 SINE MIR -104 104 3 22 0 0 0 chr17 4026941 4026963 -85477590 + AT_rich Low_complexity Low_complexity 1 22 0 453 209 40 129 chr17 4027538 4027763 -85476790 - L1MC5 LINE L1 -46 7915 7711 1869 147 7 0 chr17 4027777 4028077 -85476476 - AluJb SINE Alu -10 302 1 832 286 96 49 chr17 4028396 4028935 -85475618 + L1M4 LINE L1 3658 4230 -1916 1202 121 0 0 chr17 4029106 4029280 -85475273 + AluSg/x SINE Alu 136 309 -3 2237 89 0 0 chr17 4029833 4030125 -85474428 + AluSq SINE Alu 1 292 -21 362 316 110 30 chr17 4030872 4031109 -85473444 + L3 LINE CR1 961 1216 -361 1764 170 3 3 chr17 4031647 4031953 -85472600 - AluJb SINE Alu -5 307 2 873 91 83 0 chr17 4032219 4032351 -85472202 + AluSp SINE Alu 1 143 -170 25 0 0 0 chr17 4032351 4032376 -85472177 + AT_rich Low_complexity Low_complexity 1 25 0 1307 76 17 0 chr17 4032379 4032585 -85471968 + AluSp SINE Alu 110 318 0 537 350 137 5 chr17 4032812 4033192 -85471361 - L3 LINE CR1 -344 1233 804 414 282 57 13 chr17 4033550 4033738 -85470815 - MIR SINE MIR -31 231 33 1985 105 0 48 chr17 4033864 4034177 -85470376 + AluSq SINE Alu 4 301 -12 285 304 64 59 chr17 4034981 4035185 -85469368 + L2 LINE L2 3086 3290 -23 1072 167 158 92 chr17 4035206 4035285 -85469268 - MER44D DNA MER2_type -1882 609 537 388 46 0 31 chr17 4035285 4035350 -85469203 + (TA)n Simple_repeat Simple_repeat 2 64 0 1072 167 158 92 chr17 4035350 4035399 -85469154 - MER44D DNA MER2_type -1954 537 493 2274 64 3 3 chr17 4035399 4035695 -85468858 + AluY SINE Alu 1 296 -15 1072 167 158 92 chr17 4035695 4035882 -85468671 - MER44D DNA MER2_type -1998 493 2 2201 84 0 19 chr17 4035933 4036241 -85468312 + AluSp SINE Alu 1 302 -11 1680 149 28 3 chr17 4036601 4036890 -85467663 + AluJb SINE Alu 1 296 -16 1903 124 14 7 chr17 4036985 4037275 -85467278 - AluSx SINE Alu -20 292 1 640 211 0 30 chr17 4037820 4037953 -85466600 - FLAM_C SINE Alu -9 134 6 958 137 0 0 chr17 4038065 4038211 -85466342 + MLT2A2 LTR ERVL 308 453 0 3715 122 14 21 chr17 4038211 4038244 -85466309 + HERVL-A2 LTR ERVL 1 33 -5621 2100 104 0 7 chr17 4038244 4038542 -85466011 - AluSg SINE Alu -14 296 1 3715 122 14 21 chr17 4038542 4039084 -85465469 + HERVL-A2 LTR ERVL 33 572 -5082 11022 107 13 0 chr17 4039086 4040563 -85463990 + HERVL LTR ERVL 2125 3620 -2034 231 260 39 77 chr17 4040577 4040681 -85463872 + MIR SINE MIR 113 212 -50 2334 78 0 7 chr17 4040945 4041253 -85463300 - AluSq SINE Alu -7 306 1 337 286 267 34 chr17 4041809 4042075 -85462478 + L2 LINE L2 2985 3312 -1 595 288 55 66 chr17 4042126 4042296 -85462257 + L1M4 LINE L1 4791 4961 -1185 1915 113 29 0 chr17 4042296 4042571 -85461982 - AluSq SINE Alu -22 291 9 595 288 55 66 chr17 4042571 4042855 -85461698 + L1M4 LINE L1 4961 5240 -906 1983 145 0 0 chr17 4042925 4043236 -85461317 - AluSx SINE Alu -1 311 1 215 235 0 86 chr17 4043252 4043290 -85461263 + MIR SINE MIR 186 215 -47 1813 124 10 29 chr17 4043290 4043596 -85460957 + AluJo SINE Alu 1 300 -12 215 235 0 86 chr17 4043596 4043638 -85460915 + MIR SINE MIR 215 259 -3 431 215 21 0 chr17 4043916 4044009 -85460544 - U13 snRNA snRNA -9 95 1 1544 174 27 14 chr17 4044631 4044925 -85459628 - AluJo SINE Alu -14 298 1 1739 124 84 0 chr17 4044936 4045209 -85459344 - AluSg SINE Alu -14 296 1 1985 141 0 0 chr17 4046175 4046474 -85458079 + AluSx SINE Alu 5 303 -9 261 0 0 0 chr17 4046525 4046554 -85457999 + (TA)n Simple_repeat Simple_repeat 1 29 0 1398 94 5 19 chr17 4046688 4046900 -85457653 + AluSq SINE Alu 94 302 -11 23 0 0 0 chr17 4046948 4046971 -85457582 + AT_rich Low_complexity Low_complexity 1 23 0 2125 112 0 22 chr17 4047551 4047865 -85456688 + AluY SINE Alu 1 307 -4 1500 62 5 0 chr17 4048031 4048223 -85456330 + AluSg/x SINE Alu 96 288 -22 2104 93 0 23 chr17 4048353 4048654 -85455899 + AluSc SINE Alu 5 298 -11 285 238 119 0 chr17 4048993 4049077 -85455476 - MIR SINE MIR -76 186 93 1486 164 0 57 chr17 4049493 4049839 -85454714 - AluJo SINE Alu 0 328 1 1693 141 40 13 chr17 4050004 4050303 -85454250 - AluSx SINE Alu -5 307 1 2032 101 6 19 chr17 4050362 4050679 -85453874 - AluSp SINE Alu 0 313 1 642 287 22 32 chr17 4051070 4051317 -85453236 + MIR SINE MIR 3 256 -6 756 251 0 6 chr17 4051572 4051755 -85452798 - MLT1E2-int LTR MaLR -1157 214 33 1685 231 70 35 chr17 4051796 4052233 -85452320 - MLT1E2 LTR MaLR 0 626 151 776 188 34 40 chr17 4052323 4052499 -85452054 - MLT1E2 LTR MaLR -330 175 1 2298 62 0 3 chr17 4053697 4053988 -85450565 - AluY SINE Alu -17 294 5 272 284 124 47 chr17 4054985 4055154 -85449399 + MIR SINE MIR 3 184 -78 2480 84 3 0 chr17 4055608 4055919 -85448634 - AluSp SINE Alu -1 312 1 192 77 0 0 chr17 4056451 4056477 -85448076 + (TA)n Simple_repeat Simple_repeat 2 27 0 2674 40 3 0 chr17 4056733 4057036 -85447517 - AluY SINE Alu -7 304 1 2138 112 7 0 chr17 4057038 4057332 -85447221 - AluSx SINE Alu -16 296 1 216 0 0 0 chr17 4057949 4057973 -85446580 + (A)n Simple_repeat Simple_repeat 1 24 0 1920 164 0 6 chr17 4058120 4058432 -85446121 + AluJb SINE Alu 1 310 -2 2018 133 7 13 chr17 4059089 4059389 -85445164 + AluJb SINE Alu 1 298 -14 1806 163 10 13 chr17 4059961 4060262 -85444291 + AluJb SINE Alu 1 300 -12 1602 153 24 0 chr17 4060287 4060542 -85444011 - AluJo SINE Alu -24 288 28 2092 138 3 13 chr17 4060781 4061093 -85443460 + AluSx SINE Alu 1 309 -3 2273 107 3 0 chr17 4061306 4061605 -85442948 - AluSp SINE Alu -13 300 1 1811 173 3 7 chr17 4062302 4062603 -85441950 - AluJb SINE Alu 0 312 13 240 289 304 0 chr17 4062628 4062898 -85441655 - L3 LINE CR1 -14 1563 1212 432 0 0 0 chr17 4063260 4063308 -85441245 + (TG)n Simple_repeat Simple_repeat 2 49 0 450 225 47 41 chr17 4064705 4064874 -85439679 - Charlie1 DNA MER1_type 0 2761 2592 189 0 0 0 chr17 4064971 4064992 -85439561 + (A)n Simple_repeat Simple_repeat 1 21 0 1959 131 16 16 chr17 4065042 4065347 -85439206 + AluSq SINE Alu 1 305 -8 249 91 0 0 chr17 4065364 4065397 -85439156 + Alu SINE Alu 1 33 -268 2053 108 9 41 chr17 4065399 4065715 -85438838 + AluSx SINE Alu 7 312 0 2417 78 10 3 chr17 4065724 4066031 -85438522 + AluSq SINE Alu 1 309 -4 1012 164 0 0 chr17 4066039 4066198 -85438355 + FRAM SINE Alu 9 167 -9 244 279 48 30 chr17 4066253 4066418 -85438135 - L1P LINE L1 -3452 2694 2527 332 284 89 64 chr17 4066418 4066587 -85437966 - L1M4 LINE L1 -3623 2523 2345 681 62 42 0 chr17 4066587 4066683 -85437870 - HY3 scRNA scRNA -1 100 1 332 284 89 64 chr17 4066683 4066749 -85437804 - L1M4 LINE L1 -3801 2345 2282 2214 112 7 3 chr17 4068293 4068596 -85435957 - AluSx SINE Alu -8 304 1 467 232 106 53 chr17 4068924 4068990 -85435563 + MER20 DNA MER1_type 2 63 -156 2157 132 0 0 chr17 4068990 4069286 -85435267 - AluSx SINE Alu -10 302 7 467 232 106 53 chr17 4069286 4069426 -85435127 + MER20 DNA MER1_type 63 219 0 1275 131 0 0 chr17 4070558 4070734 -85433819 - AluSp SINE Alu -4 309 134 294 249 69 83 chr17 4071334 4071484 -85433069 + L2 LINE L2 1564 1712 -1602 2286 117 0 0 chr17 4071484 4071792 -85432761 + AluSx SINE Alu 2 309 -3 294 249 69 83 chr17 4071792 4071858 -85432695 + L2 LINE L2 1712 1777 -1537 222 254 16 16 chr17 4071953 4072016 -85432537 - L2 LINE L2 -536 2778 2716 968 141 22 5 chr17 4072254 4072438 -85432115 + L1PB2 LINE L1 5959 6145 -6 217 98 20 39 chr17 4072719 4072770 -85431783 + (GGA)n Simple_repeat Simple_repeat 2 51 0 687 237 63 10 chr17 4072807 4073014 -85431539 + HAL1 LINE L1 2184 2401 -106 572 84 36 0 chr17 4073029 4073112 -85431441 - HY3 scRNA scRNA -2 99 14 26 50 0 0 chr17 4073681 4073721 -85430832 + AT_rich Low_complexity Low_complexity 1 40 0 675 200 0 0 chr17 4073821 4073946 -85430607 + AluJo/FLAM SINE Alu 3 127 -175 2365 88 3 0 chr17 4073948 4074243 -85430310 + AluSg SINE Alu 1 296 -14 2208 110 3 0 chr17 4076332 4076623 -85427930 - AluSq SINE Alu -17 296 5 2352 65 33 26 chr17 4078662 4078969 -85425584 - AluY SINE Alu -2 309 1 2059 137 0 29 chr17 4078990 4079305 -85425248 - AluSx SINE Alu -6 306 1 415 238 32 56 chr17 4079305 4079431 -85425122 + MER5B DNA MER1_type 5 127 -51 2043 168 0 0 chr17 4084090 4084400 -85420153 - AluJb SINE Alu -2 310 1 1585 206 3 19 chr17 4084423 4084733 -85419820 + AluJo SINE Alu 1 305 -7 225 360 26 20 chr17 4085133 4085286 -85419267 - L1MC/D LINE L1 -2164 5644 5491 2525 48 10 0 chr17 4086295 4086590 -85417963 + AluY SINE Alu 1 298 -13 181 274 0 65 chr17 4087443 4087505 -85417048 - MIR SINE MIR -81 181 124 246 276 104 22 chr17 4087855 4087989 -85416564 + MIR SINE MIR 47 191 -71 1771 70 86 150 chr17 4090637 4090964 -85413589 + AluSx SINE Alu 1 306 -6 2071 132 7 3 chr17 4090984 4091280 -85413273 - AluSx SINE Alu -15 297 1 1174 92 92 24 chr17 4095748 4095955 -85408598 - L1PB1 LINE L1 -2 6149 5929 308 321 30 15 chr17 4096540 4096674 -85407879 + MIR SINE MIR 48 183 -79 1507 125 133 26 chr17 4097060 4097324 -85407229 - AluSx SINE Alu -1 311 20 332 308 100 8 chr17 4098148 4098268 -85406285 + L2 LINE L2 3181 3311 -2 2018 128 7 3 chr17 4098567 4098856 -85405697 + AluJb SINE Alu 7 296 -16 259 325 50 17 chr17 4099820 4099940 -85404613 - L2 LINE L2 -217 3055 2932 2094 103 6 91 chr17 4100147 4100487 -85404066 + AluSx SINE Alu 1 311 -1 532 203 23 53 chr17 4103986 4104119 -85400434 - FLAM_A SINE Alu -2 131 3 206 343 40 80 chr17 4104288 4104463 -85400090 + MER5A DNA MER1_type 21 188 -1 212 242 158 32 chr17 4105038 4105133 -85399420 + L2 LINE L2 3204 3310 -3 687 193 0 17 chr17 4105169 4105288 -85399265 - FLAM_A SINE Alu -16 117 1 935 305 90 23 chr17 4105703 4106246 -85398307 + L2 LINE L2 2493 3068 -245 2232 128 0 0 chr17 4106374 4106678 -85397875 + AluSx SINE Alu 2 305 -7 2129 133 0 3 chr17 4107426 4107719 -85396834 - AluSx SINE Alu -11 301 10 2283 118 3 10 chr17 4107734 4108048 -85396505 - AluSx SINE Alu 0 312 1 2019 104 0 4 chr17 4108580 4108848 -85395705 - AluSx SINE Alu -45 267 1 1841 239 47 48 chr17 4109531 4109612 -85394941 + L1M4c LINE L1 2070 2150 -4232 2190 114 0 17 chr17 4109612 4109921 -85394632 + AluSx SINE Alu 1 304 0 1841 239 47 48 chr17 4109921 4109952 -85394601 + L1M4c LINE L1 2150 2180 -4202 1887 158 0 16 chr17 4109952 4110255 -85394298 + AluJo SINE Alu 1 298 -14 1841 239 47 48 chr17 4110255 4110525 -85394028 + L1M4c LINE L1 2180 2449 -3933 2583 60 0 0 chr17 4110525 4110825 -85393728 + AluY SINE Alu 1 300 -11 1841 239 47 48 chr17 4110825 4111184 -85393369 + L1M4c LINE L1 2449 2799 -3583 1525 35 29 0 chr17 4111184 4111358 -85393195 + SVA Other Other 1208 1386 0 1841 239 47 48 chr17 4111358 4111406 -85393147 + L1M4c LINE L1 2799 2846 -3536 461 213 21 0 chr17 4111407 4111501 -85393052 - AluJo SINE Alu -178 134 39 761 188 19 0 chr17 4111510 4111670 -85392883 + L1M4c LINE L1 2836 2998 -3384 728 208 39 0 chr17 4111678 4111808 -85392745 - AluJo SINE Alu -176 136 2 4289 209 37 40 chr17 4111809 4112621 -85391932 + L1M4c LINE L1 2987 3799 -2583 2064 112 0 4 chr17 4112621 4112899 -85391654 + AluSx SINE Alu 27 303 -9 4289 209 37 40 chr17 4112899 4113132 -85391421 + L1M4c LINE L1 3799 4031 -2351 2196 112 14 7 chr17 4113132 4113428 -85391125 - AluSx SINE Alu -14 298 1 4289 209 37 40 chr17 4113428 4113692 -85390861 + L1M4c LINE L1 4031 4294 -2088 761 186 54 143 chr17 4113793 4113968 -85390585 - MLT1F LTR MaLR -224 318 188 1975 162 0 0 chr17 4113968 4114258 -85390295 - AluJo SINE Alu -22 290 1 761 186 54 143 chr17 4114258 4114431 -85390122 - MLT1F LTR MaLR -354 188 1 603 264 16 36 chr17 4114441 4114634 -85389919 + L2 LINE L2 3114 3302 -11 213 39 0 0 chr17 4114669 4114695 -85389858 + (TTTA)n Simple_repeat Simple_repeat 3 28 0 1557 170 4 43 chr17 4114767 4115044 -85389509 - AluJb SINE Alu -45 267 2 275 62 0 42 chr17 4115045 4115093 -85389460 + MER65A LTR ERV1 400 445 0 2143 117 0 52 chr17 4115146 4115470 -85389083 + AluSx SINE Alu 1 307 -5 422 131 31 46 chr17 4115470 4115600 -85388953 + GA-rich Low_complexity Low_complexity 1 128 0 390 267 89 5 chr17 4115791 4116007 -85388546 + L1M4 LINE L1 5191 5424 -740 251 175 0 32 chr17 4116023 4116086 -85388467 + GA-rich Low_complexity Low_complexity 3 63 0 2272 104 0 13 chr17 4116128 4116436 -85388117 + AluSx SINE Alu 1 304 -8 2218 96 27 7 chr17 4116713 4117014 -85387539 - AluSx SINE Alu -5 307 1 391 332 156 17 chr17 4117187 4117425 -85387128 + L2 LINE L2 2079 2349 -965 814 190 70 25 chr17 4117426 4117584 -85386969 + FRAM SINE Alu 1 161 -15 516 328 72 39 chr17 4117626 4117695 -85386858 + L2 LINE L2 2376 2441 -873 1851 141 56 0 chr17 4117695 4117979 -85386574 - AluSx SINE Alu -12 300 1 516 328 72 39 chr17 4117979 4117998 -85386555 + L2 LINE L2 2441 2458 -856 2198 113 7 0 chr17 4117998 4118299 -85386254 - AluSx SINE Alu -9 303 1 516 328 72 39 chr17 4118299 4118661 -85385892 + L2 LINE L2 2458 2847 -467 2452 86 3 0 chr17 4118661 4118962 -85385591 - AluSp SINE Alu -11 302 1 516 328 72 39 chr17 4118962 4118994 -85385559 + L2 LINE L2 2847 2876 -438 263 421 64 0 chr17 4119101 4119241 -85385312 + L2 LINE L2 3123 3271 -1 1039 174 0 0 chr17 4119249 4119410 -85385143 - AluSg/x SINE Alu -16 294 134 1743 154 79 101 chr17 4119410 4119844 -85384709 + L1MB7 LINE L1 5674 6116 -68 2514 74 0 0 chr17 4119844 4120141 -85384412 + AluY SINE Alu 1 297 -14 1741 164 14 3 chr17 4120151 4120444 -85384109 + AluSx SINE Alu 13 308 -4 1778 171 31 0 chr17 4120444 4120731 -85383822 + AluJb SINE Alu 1 296 -16 1743 154 79 101 chr17 4120731 4120789 -85383764 + L1MB7 LINE L1 6123 6167 -17 352 221 12 35 chr17 4121095 4121181 -85383372 + MIR SINE MIR 41 124 -84 2463 69 0 0 chr17 4121448 4121739 -85382814 + AluY SINE Alu 1 291 -20 370 100 29 43 chr17 4122023 4122093 -85382460 + L1MB7 LINE L1 5808 5876 -308 2408 80 3 3 chr17 4123038 4123338 -85381215 - AluSq SINE Alu -13 300 1 191 386 29 0 chr17 4125034 4125104 -85379449 - MIR SINE MIR -96 112 41 1227 91 5 32 chr17 4125114 4125301 -85379252 - L1PA11 LINE L1 0 6174 5993 2402 91 0 0 chr17 4125630 4125928 -85378625 + AluSx SINE Alu 1 298 -14 439 356 75 61 chr17 4126230 4126590 -85377963 - L2 LINE L2 -2 3270 2906 1122 254 135 21 chr17 4126617 4127047 -85377506 - MLT1J LTR MaLR -27 484 6 2379 70 13 7 chr17 4129212 4129510 -85375043 - AluY SINE Alu -11 300 1 197 327 0 0 chr17 4129664 4129719 -85374834 + L2 LINE L2 2716 2770 -544 323 331 18 10 chr17 4130250 4130379 -85374174 + MIR SINE MIR 18 141 -67 362 132 0 15 chr17 4130640 4130708 -85373845 + (GGGA)n Simple_repeat Simple_repeat 4 70 0 292 129 0 48 chr17 4130708 4130770 -85373783 + (GGAGAA)n Simple_repeat Simple_repeat 3 61 0 2293 109 0 0 chr17 4131127 4131421 -85373132 + AluSg SINE Alu 1 294 -16 300 270 81 0 chr17 4131507 4131655 -85372898 + L1ME4a LINE L1 5962 6121 0 360 297 12 36 chr17 4132054 4132219 -85372334 + MLT1K LTR MaLR 126 286 -302 494 215 25 0 chr17 4132290 4132411 -85372142 + MLT1K LTR MaLR 462 585 -3 992 193 6 0 chr17 4132897 4133063 -85371490 + FAM SINE Alu 1 167 -8 1000 184 54 97 chr17 4133127 4133317 -85371236 - L1M4 LINE L1 -914 5232 5036 2064 140 0 31 chr17 4133317 4133639 -85370914 - AluSx SINE Alu 0 312 1 1000 184 54 97 chr17 4133639 4133732 -85370821 - L1M4 LINE L1 -1110 5036 4962 2328 118 0 3 chr17 4133732 4134036 -85370517 - AluSx SINE Alu -9 303 1 1000 184 54 97 chr17 4134036 4134082 -85370471 - L1M4 LINE L1 -1184 4962 4916 427 307 101 46 chr17 4134592 4134810 -85369743 + MIR SINE MIR 2 231 -31 229 181 0 113 chr17 4136269 4136446 -85368107 + G-rich Low_complexity Low_complexity 2 158 0 2160 95 0 3 chr17 4136804 4137133 -85367420 + AluSx SINE Alu 1 328 0 1026 108 43 0 chr17 4137814 4137992 -85366561 - AluSp SINE Alu 0 324 141 1684 228 49 48 chr17 4138101 4138627 -85365926 - L1MC4 LINE L1 -276 7766 7240 819 241 66 0 chr17 4138634 4138846 -85365707 - L1MC4 LINE L1 -990 7052 6827 310 155 13 25 chr17 4138866 4138945 -85365608 - AluS SINE Alu -238 65 1 265 265 0 13 chr17 4138945 4139029 -85365524 - L1MC4 LINE L1 -1474 6530 6439 270 268 14 14 chr17 4139900 4139971 -85364582 + L2 LINE L2 3198 3268 -4 2242 103 7 0 chr17 4140449 4140739 -85363814 + AluSg SINE Alu 1 292 -18 281 311 92 0 chr17 4142530 4142649 -85361904 - MER117 DNA MER1_type -22 175 46 1804 177 0 13 chr17 4142756 4143055 -85361498 - AluJb SINE Alu -17 295 1 1758 180 9 25 chr17 4143114 4143431 -85361122 - AluJb SINE Alu 0 312 1 27 29 0 0 chr17 4143770 4143804 -85360749 + AT_rich Low_complexity Low_complexity 1 34 0 21 0 0 0 chr17 4143892 4143913 -85360640 + AT_rich Low_complexity Low_complexity 1 21 0 2157 117 3 13 chr17 4144761 4145070 -85359483 + AluSx SINE Alu 1 306 -6 2003 93 0 0 chr17 4145826 4146083 -85358470 - AluY SINE Alu 0 311 55 2463 93 0 0 chr17 4146845 4147147 -85357406 + AluSq SINE Alu 1 302 -11 1790 169 23 13 chr17 4147169 4147477 -85357076 + AluJo SINE Alu 1 311 -1 1030 212 73 38 chr17 4148156 4148232 -85356321 - LTR37A LTR ERV1 0 426 354 1548 174 22 73 chr17 4148232 4148251 -85356302 - AluJb SINE Alu -11 301 283 201 74 0 0 chr17 4148251 4148278 -85356275 + (TTCA)n Simple_repeat Simple_repeat 3 29 0 1548 174 22 73 chr17 4148278 4148428 -85356125 - AluJb SINE Alu -29 283 153 2210 102 3 16 chr17 4148428 4148731 -85355822 - AluSx SINE Alu -9 303 5 1548 174 22 73 chr17 4148731 4148877 -85355676 - AluJb SINE Alu -159 153 1 1030 212 73 38 chr17 4148877 4149168 -85355385 - LTR37A LTR ERV1 -72 354 46 222 37 0 0 chr17 4149186 4149213 -85355340 + (T)n Simple_repeat Simple_repeat 1 27 0 2445 70 30 0 chr17 4149409 4149711 -85354842 - AluY SINE Alu 0 311 1 1136 138 10 20 chr17 4150126 4150329 -85354224 - L1MA2 LINE L1 0 6304 6104 223 352 33 0 chr17 4150416 4150507 -85354046 - L2 LINE L2 -6 3266 3173 1073 318 92 53 chr17 4151186 4152242 -85352311 - L2 LINE L2 0 3272 2163 1802 163 7 29 chr17 4152242 4152549 -85352004 + AluJb SINE Alu 1 300 -12 1073 318 92 53 chr17 4152549 4152813 -85351740 - L2 LINE L2 -1109 2163 1911 485 260 180 0 chr17 4152985 4153135 -85351418 - MER5A DNA MER1_type 0 189 13 251 330 53 0 chr17 4153178 4153272 -85351281 - L3 LINE CR1 -67 1510 1412 471 289 162 29 chr17 4153400 4153708 -85350845 - L3 LINE CR1 -555 1022 674 2163 107 0 32 chr17 4154083 4154391 -85350162 + AluSx SINE Alu 2 299 -13 2444 91 3 0 chr17 4154722 4155030 -85349523 - AluSp SINE Alu -4 309 1 2060 136 20 3 chr17 4155030 4155324 -85349229 - AluSx SINE Alu -12 300 2 186 311 107 80 chr17 4156212 4156437 -85348116 - L2 LINE L2 -97 3175 2945 1153 60 0 0 chr17 4156555 4156689 -85347864 - AluSq/x SINE Alu -178 134 1 216 271 19 84 chr17 4156722 4156829 -85347724 - MIR3 SINE MIR -1 207 108 2490 78 3 0 chr17 4157515 4157821 -85346732 + AluSp SINE Alu 1 307 -6 280 93 19 19 chr17 4157831 4157885 -85346668 + L1MB7 LINE L1 6130 6183 -1 1801 102 0 38 chr17 4157895 4158159 -85346394 + AluSx SINE Alu 58 311 -1 312 207 35 0 chr17 4158212 4158270 -85346283 + AluS SINE Alu 2 61 -241 2332 90 3 3 chr17 4158535 4158835 -85345718 - AluSx SINE Alu -12 300 1 2072 122 0 0 chr17 4158853 4159160 -85345393 - AluSx SINE Alu 0 309 3 625 256 84 0 chr17 4159540 4159731 -85344822 - MIR SINE MIR 0 262 56 2313 92 20 3 chr17 4159740 4160044 -85344509 - AluY SINE Alu -2 309 1 670 177 15 23 chr17 4160044 4160174 -85344379 - FLAM_A SINE Alu -4 129 1 219 158 0 0 chr17 4160175 4160213 -85344340 - MIR SINE MIR -71 191 154 283 85 0 0 chr17 4160321 4160368 -85344185 + Alu SINE Alu 262 308 0 2197 65 41 31 chr17 4160409 4160703 -85343850 - AluY SINE Alu -6 305 9 884 195 227 35 chr17 4161311 4161567 -85342986 + AluSx SINE Alu 1 305 -7 1405 181 89 14 chr17 4161571 4161678 -85342875 + AluJb SINE Alu 1 99 -213 2235 117 0 0 chr17 4161678 4161976 -85342577 + AluSq SINE Alu 3 300 -13 1405 181 89 14 chr17 4161976 4162150 -85342403 + AluJb SINE Alu 99 303 -9 1703 163 46 0 chr17 4163115 4163397 -85341156 - AluJo SINE Alu -17 295 1 355 273 40 66 chr17 4163475 4163673 -85340880 - HAL1b LINE L1 -916 432 240 260 278 204 6 chr17 4164217 4164379 -85340174 - MLT1K LTR MaLR -17 571 378 335 167 0 39 chr17 4164715 4164793 -85339760 + L1ME4a LINE L1 6046 6120 -1 2216 100 10 3 chr17 4164840 4165139 -85339414 + AluSx SINE Alu 1 301 -11 2321 62 10 10 chr17 4167100 4167388 -85337165 + AluSg SINE Alu 1 288 -22 336 227 106 63 chr17 4167460 4167520 -85337033 + L1MC/D LINE L1 5198 5254 -984 1901 158 7 3 chr17 4167520 4167817 -85336736 - AluJb SINE Alu -14 298 1 336 227 106 63 chr17 4167817 4168007 -85336546 + L1MC/D LINE L1 5254 5472 -766 1527 153 3 130 chr17 4168298 4168433 -85336120 + AluJb SINE Alu 1 151 -161 512 103 11 0 chr17 4168433 4168520 -85336033 + L1PB1 LINE L1 6063 6150 -1 1527 153 3 130 chr17 4168520 4168731 -85335822 + AluJb SINE Alu 151 303 -9 239 148 37 19 chr17 4168768 4168822 -85335731 + (CATA)n Simple_repeat Simple_repeat 2 56 0 719 224 46 0 chr17 4169145 4169319 -85335234 + MER5A DNA MER1_type 2 183 -6 189 107 0 0 chr17 4169546 4169574 -85334979 + (A)n Simple_repeat Simple_repeat 1 28 0 2265 97 0 10 chr17 4169659 4169958 -85334595 - AluSq SINE Alu -17 296 1 1642 212 13 0 chr17 4171043 4171345 -85333208 - AluJb SINE Alu -6 306 1 2081 135 7 0 chr17 4171453 4171750 -85332803 - AluSx SINE Alu -13 299 1 399 230 0 11 chr17 4172255 4172342 -85332211 - MIR SINE MIR -175 87 2 2627 208 73 66 chr17 4172371 4172492 -85332061 - L1ME1 LINE L1 -8 6092 5973 2291 120 3 3 chr17 4172492 4172801 -85331752 + AluSx SINE Alu 2 310 -2 2627 208 73 66 chr17 4172801 4173577 -85330976 - L1ME1 LINE L1 -127 5973 5188 1910 239 131 23 chr17 4173586 4174446 -85330107 - L1ME1 LINE L1 -2045 4035 3083 1294 98 0 6 chr17 4174446 4174619 -85329934 - AluSg/x SINE Alu -11 299 128 345 220 184 48 chr17 4174619 4174787 -85329766 - L1ME1 LINE L1 -2993 3087 2897 862 175 6 38 chr17 4174789 4174949 -85329604 - AluJo SINE Alu -138 174 20 497 218 77 12 chr17 4174970 4175140 -85329413 - L1ME1 LINE L1 -3570 2510 2330 1678 174 14 7 chr17 4175147 4175435 -85329118 + AluJb SINE Alu 2 291 -21 369 243 26 53 chr17 4175490 4175642 -85328911 - L1ME1 LINE L1 -5882 188 41 2123 123 0 3 chr17 4175841 4176134 -85328419 - AluSx SINE Alu -20 292 1 21 0 0 0 chr17 4176141 4176162 -85328391 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr17 4176243 4176266 -85328287 + AT_rich Low_complexity Low_complexity 1 23 0 1847 58 9 0 chr17 4176767 4176991 -85327562 + AluY SINE Alu 82 307 -4 650 234 96 59 chr17 4178013 4178316 -85326237 - L1MC5 LINE L1 -47 7914 7601 1662 229 112 74 chr17 4178353 4179255 -85325298 - L1MC5 LINE L1 -471 7490 6542 204 382 88 23 chr17 4180249 4180572 -85323981 + L2 LINE L2 1700 2071 -1243 2323 39 0 0 chr17 4180572 4180832 -85323721 - AluY SINE Alu -11 300 41 204 382 88 23 chr17 4180832 4181032 -85323521 + L2 LINE L2 2071 2257 -1057 2016 94 56 3 chr17 4181032 4181320 -85323233 - AluSq SINE Alu -8 305 3 1995 188 105 20 chr17 4181519 4182015 -85322538 - L1MB7 LINE L1 -56 6128 5591 1386 167 0 70 chr17 4182049 4182336 -85322217 - AluJo SINE Alu -23 289 23 2028 87 38 11 chr17 4182643 4182930 -85321623 - AluSg1 SINE Alu -10 299 5 498 33 0 0 chr17 4183006 4183066 -85321487 + (TA)n Simple_repeat Simple_repeat 2 61 0 1364 198 32 12 chr17 4183068 4183321 -85321232 - AluJo SINE Alu -31 281 24 294 179 32 0 chr17 4183322 4183417 -85321136 + (TA)n Simple_repeat Simple_repeat 2 99 0 2102 129 3 3 chr17 4183418 4183721 -85320832 - AluSg SINE Alu -7 303 1 231 306 24 0 chr17 4183762 4183847 -85320706 - L1ME4a LINE L1 -67 6054 5968 204 135 0 0 chr17 4183849 4183886 -85320667 + (TG)n Simple_repeat Simple_repeat 1 37 0 333 182 0 80 chr17 4184066 4184087 -85320466 - L1ME4a LINE L1 -327 5794 5773 2342 86 7 13 chr17 4184087 4184390 -85320163 + AluSx SINE Alu 1 301 -11 333 182 0 80 chr17 4184390 4184456 -85320097 - L1ME4a LINE L1 -348 5773 5714 230 315 177 35 chr17 4186622 4187159 -85317394 + L2 LINE L2 2248 2860 -454 2137 104 3 7 chr17 4187912 4188211 -85316342 + AluY SINE Alu 1 298 -13 985 185 45 15 chr17 4188278 4188478 -85316075 + MER3 DNA MER1_type 1 206 -3 376 250 121 0 chr17 4188824 4188948 -85315605 - MIR SINE MIR -112 150 12 2197 103 20 3 chr17 4188950 4189252 -85315301 - AluSx SINE Alu -5 307 1 425 186 23 12 chr17 4189455 4189541 -85315012 - L2 LINE L2 -43 3270 3184 * 508 304 62 41 chr17 4189533 4189930 -85314623 - L2 LINE L2 -258 3055 2653 1957 160 3 7 chr17 4190005 4190312 -85314241 + AluJb SINE Alu 1 306 -6 21 0 0 0 chr17 4190617 4190638 -85313915 + AT_rich Low_complexity Low_complexity 1 21 0 1885 136 39 0 chr17 4190877 4191157 -85313396 + AluSx SINE Alu 1 291 -21 683 171 0 8 chr17 4191715 4191832 -85312721 + AluJo/FLAM SINE Alu 2 117 -195 539 158 158 36 chr17 4191827 4191966 -85312587 - AluSg/x SINE Alu -16 294 139 * 1717 154 0 0 chr17 4191973 4192232 -85312321 - AluSx SINE Alu -53 259 1 1104 123 0 0 chr17 4192266 4192421 -85312132 + AluJb SINE Alu 132 286 -26 219 88 0 0 chr17 4193134 4193168 -85311385 + (CACCC)n Simple_repeat Simple_repeat 3 36 0 2517 74 0 0 chr17 4194594 4194893 -85309660 + AluSx SINE Alu 1 299 -13 229 299 19 37 chr17 4194984 4195091 -85309462 - L2 LINE L2 -2673 641 537 793 172 31 0 chr17 4195107 4195235 -85309318 - FLAM_C SINE Alu -1 132 1 843 185 5 43 chr17 4195373 4195557 -85308996 + FRAM SINE Alu 1 172 -4 230 176 59 0 chr17 4196107 4196158 -85308395 + L2 LINE L2 3209 3262 -10 337 234 47 55 chr17 4196180 4196308 -85308245 + MIR3 SINE MIR 33 159 -49 2469 63 3 22 chr17 4196582 4196898 -85307655 - AluSg SINE Alu 0 310 1 191 257 124 9 chr17 4197359 4197464 -85307089 + MIR SINE MIR 16 132 -130 1212 108 11 17 chr17 4200069 4200245 -85304308 + FRAM SINE Alu 1 171 -5 859 201 39 44 chr17 4202316 4202520 -85302033 - MER3 DNA MER1_type -5 204 2 251 167 83 69 chr17 4202857 4202929 -85301624 - MIR SINE MIR -31 231 159 1641 176 27 10 chr17 4203016 4203311 -85301242 - AluJo SINE Alu -10 302 3 1703 58 24 0 chr17 4203663 4203871 -85300682 - AluY SINE Alu -19 292 80 2608 50 0 0 chr17 4203871 4204167 -85300386 - AluY SINE Alu -14 297 1 1223 183 114 19 chr17 4204441 4204704 -85299849 + AluJo SINE Alu 1 288 -24 376 88 0 18 chr17 4204728 4204785 -85299768 + Alu SINE Alu 238 293 -8 1420 124 139 23 chr17 4205870 4206129 -85298424 - AluSg SINE Alu -21 289 1 445 288 158 28 chr17 4206379 4206604 -85297949 - LTR16A LTR ERVL 0 457 201 795 196 266 32 chr17 4206749 4207061 -85297492 + MLT1F1 LTR MaLR 183 567 0 1799 128 60 0 chr17 4207588 4207870 -85296683 - AluSx SINE Alu -13 299 1 1360 128 50 5 chr17 4208004 4208222 -85296331 + MER30 DNA MER1_type 1 228 -2 2209 113 3 3 chr17 4208663 4208963 -85295590 + AluSq SINE Alu 1 300 -13 277 235 78 72 chr17 4209037 4209190 -85295363 + L1 LINE L1 4882 5035 -1111 874 168 7 7 chr17 4209299 4209454 -85295099 + AluSg/x SINE Alu 135 289 -21 369 0 0 0 chr17 4209456 4209497 -85295056 + (TA)n Simple_repeat Simple_repeat 2 42 0 2003 141 3 7 chr17 4209674 4209971 -85294582 - AluSx SINE Alu -14 298 3 1818 161 43 7 chr17 4209973 4210272 -85294281 - AluSx SINE Alu -2 310 1 2236 86 21 3 chr17 4210279 4210569 -85293984 - AluSq SINE Alu -18 295 1 400 251 104 32 chr17 4210575 4210960 -85293593 + L1ME3A LINE L1 5521 5940 -230 522 69 14 0 chr17 4211409 4211481 -85293072 - U3 snRNA snRNA -144 73 1 2235 128 0 0 chr17 4211707 4212019 -85292534 - AluSx SINE Alu 0 312 1 1816 134 40 0 chr17 4212867 4213143 -85291410 + AluSg SINE Alu 1 287 -23 254 319 11 0 chr17 4213330 4213421 -85291132 + GA-rich Low_complexity Low_complexity 4 95 0 2144 114 0 20 chr17 4213505 4213811 -85290742 + AluSx SINE Alu 1 300 -12 26 30 0 0 chr17 4213892 4213925 -85290628 + AT_rich Low_complexity Low_complexity 1 33 0 2251 128 0 7 chr17 4213953 4214257 -85290296 + AluSx SINE Alu 1 302 -10 2289 121 0 6 chr17 4214605 4214918 -85289635 + AluSx SINE Alu 1 311 -1 1833 171 13 10 chr17 4215092 4215432 -85289121 - AluJo SINE Alu 0 341 1 388 289 139 66 chr17 4215518 4215958 -85288595 + HAL1 LINE L1 1394 1875 -632 2305 98 0 3 chr17 4215958 4216254 -85288299 + AluSc SINE Alu 1 295 -14 388 289 139 66 chr17 4216254 4216301 -85288252 + HAL1 LINE L1 1875 1917 -590 2345 107 0 0 chr17 4216413 4216713 -85287840 + AluSx SINE Alu 3 302 -10 1253 134 0 21 chr17 4217048 4217235 -85287318 + AluSx SINE Alu 1 183 -129 260 266 46 29 chr17 4217254 4217427 -85287126 + C-rich Low_complexity Low_complexity 3 178 0 180 228 0 0 chr17 4217465 4217522 -85287031 + C-rich Low_complexity Low_complexity 1 57 0 194 224 0 26 chr17 4217586 4217662 -85286891 + C-rich Low_complexity Low_complexity 3 76 0 397 306 0 0 chr17 4217962 4218086 -85286467 + G-rich Low_complexity Low_complexity 1 124 0 384 249 0 0 chr17 4218098 4218263 -85286290 + G-rich Low_complexity Low_complexity 1 165 0 351 167 0 0 chr17 4218297 4218387 -85286166 + G-rich Low_complexity Low_complexity 1 90 0 1458 98 0 0 chr17 4218427 4218611 -85285942 + AluSg/x SINE Alu 116 299 -13 22 0 0 0 chr17 4218709 4218731 -85285822 + AT_rich Low_complexity Low_complexity 1 22 0 1118 208 64 13 chr17 4218916 4219152 -85285401 - MLT1F1 LTR MaLR -307 260 13 615 248 30 0 chr17 4219192 4219325 -85285228 - MER119 DNA MER1_type -391 192 56 421 167 175 0 chr17 4219811 4219925 -85284628 - L1MA9 LINE L1 -10 6302 6169 1437 204 87 63 chr17 4219967 4220384 -85284169 - L1MC4a LINE L1 0 7808 7377 1748 175 24 0 chr17 4220384 4220675 -85283878 + AluJo SINE Alu 1 298 -14 1437 204 87 63 chr17 4220675 4220718 -85283835 - L1MC4a LINE L1 -431 7377 7337 1810 174 26 10 chr17 4220830 4221134 -85283419 + AluJb SINE Alu 1 309 -3 220 295 77 0 chr17 4221186 4221264 -85283289 + L2 LINE L2 3191 3274 -39 199 396 20 41 chr17 4222791 4222988 -85281565 + L2 LINE L2 2992 3184 -88 1686 141 46 89 chr17 4223093 4223440 -85281113 + MER7A DNA MER2_type 1 330 -16 1615 167 33 46 chr17 4223673 4223979 -85280574 - AluJo SINE Alu -10 302 1 478 239 23 6 chr17 4223986 4224114 -85280439 - L1MA9 LINE L1 0 6291 6167 2329 108 7 0 chr17 4224231 4224536 -85280017 + AluSx SINE Alu 1 307 -5 2134 122 7 0 chr17 4226028 4226323 -85278230 + AluSg SINE Alu 1 297 -13 26 30 0 0 chr17 4226657 4226690 -85277863 + AT_rich Low_complexity Low_complexity 1 33 0 627 104 144 80 chr17 4227215 4227340 -85277213 + FLAM_C SINE Alu 1 133 0 2053 116 37 7 chr17 4227642 4227936 -85276617 - AluSp SINE Alu -10 303 1 2082 125 7 0 chr17 4227939 4228228 -85276325 - AluSx SINE Alu -21 291 1 1978 111 17 10 chr17 4228719 4229007 -85275546 - AluSg SINE Alu -20 290 1 441 270 146 74 chr17 4229382 4229815 -85274738 + L1MC4 LINE L1 7579 8042 0 1944 72 0 0 chr17 4229895 4230131 -85274422 - AluY SINE Alu -75 236 1 303 242 53 45 chr17 4230134 4230266 -85274287 - L1M1 LINE L1 -4139 3426 3294 938 149 24 0 chr17 4230326 4230494 -85274059 + L1MA8 LINE L1 6092 6263 -28 938 189 12 0 chr17 4230496 4230660 -85273893 + FRAM SINE Alu 1 163 -13 285 183 0 0 chr17 4230710 4230770 -85273783 + (CATA)n Simple_repeat Simple_repeat 2 61 0 1628 182 0 30 chr17 4232089 4232386 -85272167 - AluJb SINE Alu -24 288 1 334 148 0 33 chr17 4232388 4232449 -85272104 - FLAM_A SINE Alu 0 133 75 282 253 32 32 chr17 4232479 4232574 -85271979 - L2 LINE L2 -11 3302 3208 2138 117 7 0 chr17 4232684 4232982 -85271571 + AluSx SINE Alu 1 300 -12 190 176 40 135 chr17 4233340 4233382 -85271171 - L2 LINE L2 -60 3253 3219 2146 124 0 0 chr17 4233382 4233680 -85270873 + AluY SINE Alu 1 298 -13 190 176 40 135 chr17 4233680 4233711 -85270842 - L2 LINE L2 -94 3219 3187 723 162 0 63 chr17 4234185 4234327 -85270226 + FLAM_C SINE Alu 1 133 0 2136 104 0 4 chr17 4234626 4234940 -85269613 - AluSc SINE Alu 0 313 1 670 177 15 23 chr17 4234940 4235070 -85269483 - FLAM_A SINE Alu -4 129 1 596 258 16 27 chr17 4235071 4235257 -85269296 - MIR SINE MIR -71 191 8 2183 134 0 0 chr17 4235507 4235805 -85268748 - AluSx SINE Alu -14 298 1 25 0 0 0 chr17 4235824 4235849 -85268704 + AT_rich Low_complexity Low_complexity 1 25 0 1321 182 22 85 chr17 4236760 4237078 -85267475 - AluJo SINE Alu -14 298 1 488 179 8 60 chr17 4237083 4237200 -85267353 - FLAM_A SINE Alu -13 129 19 931 114 0 8 chr17 4237204 4237336 -85267217 + AluJb SINE Alu 171 301 -11 2050 133 13 0 chr17 4237341 4237643 -85266910 + AluSg SINE Alu 1 306 -4 1979 137 3 13 chr17 4238404 4238717 -85265836 + AluJb SINE Alu 1 310 -2 200 318 123 26 chr17 4238738 4238933 -85265620 + L2 LINE L2 2083 2296 -1018 310 291 250 15 chr17 4239311 4239507 -85265046 + MIR SINE MIR 21 262 0 677 228 59 41 chr17 4239578 4239724 -85264829 + MIR SINE MIR 21 174 -88 2235 129 0 15 chr17 4239724 4240066 -85264487 + MER1B DNA MER1_type 1 337 0 677 228 59 41 chr17 4240066 4240138 -85264415 + MIR SINE MIR 174 243 -19 307 54 0 0 chr17 4240250 4240287 -85264266 + AluSp SINE Alu 132 168 -135 421 123 0 0 chr17 4240287 4240344 -85264209 + AluS SINE Alu 230 286 -24 1061 146 113 17 chr17 4240736 4240975 -85263578 - MER58B DNA MER1_type 0 341 80 225 232 24 110 chr17 4241017 4241099 -85263454 - MER58B DNA MER1_type -251 90 16 1060 186 15 51 chr17 4241973 4242247 -85262306 + L1ME1 LINE L1 4382 4645 -1501 1393 163 135 0 chr17 4242247 4242492 -85262061 - AluJo SINE Alu -17 295 18 1079 233 103 21 chr17 4242505 4242883 -85261670 + L1ME1 LINE L1 4634 5042 -1104 878 136 45 32 chr17 4242892 4243047 -85261506 + FAM SINE Alu 1 46 -3 3204 191 104 46 chr17 4243092 4243347 -85261206 + L1ME1 LINE L1 4980 5219 -947 2122 111 4 0 chr17 4243347 4243627 -85260926 + AluSx SINE Alu 21 301 -11 3204 191 104 46 chr17 4243627 4243859 -85260694 + L1ME1 LINE L1 5219 5436 -730 1610 172 62 10 chr17 4243859 4244150 -85260403 + AluJo SINE Alu 1 306 -6 3204 191 104 46 chr17 4244150 4244569 -85259984 + L1ME1 LINE L1 5436 5963 -203 1787 84 0 4 chr17 4244569 4244818 -85259735 + AluSx SINE Alu 58 305 0 3204 191 104 46 chr17 4244818 4245030 -85259523 + L1ME1 LINE L1 5963 6161 -5 1249 217 75 65 chr17 4245430 4245598 -85258955 + MLT1D LTR MaLR 3 168 -337 2461 81 3 0 chr17 4245598 4245906 -85258647 + AluY SINE Alu 1 309 -2 1249 217 75 65 chr17 4245906 4246231 -85258322 + MLT1D LTR MaLR 168 501 -4 210 321 0 0 chr17 4246482 4246535 -85258018 - MIR SINE MIR -155 107 55 2057 116 7 14 chr17 4246830 4247123 -85257430 - AluSq SINE Alu -22 291 1 2379 99 0 3 chr17 4247386 4247689 -85256864 - AluSg SINE Alu -8 302 1 261 191 48 16 chr17 4247833 4247896 -85256657 - L1ME LINE L1 -557 5564 5500 2111 46 81 0 chr17 4248213 4248473 -85256080 + AluSx SINE Alu 21 301 -11 3448 169 23 73 chr17 4249096 4249881 -85254672 - L1MB8 LINE L1 -5 6173 5428 2356 100 3 0 chr17 4250274 4250613 -85253940 + AluSx SINE Alu 1 340 0 1780 142 46 14 chr17 4250769 4251051 -85253502 + AluJb SINE Alu 1 291 -21 351 202 0 0 chr17 4251075 4251159 -85253394 + GA-rich Low_complexity Low_complexity 3 86 0 202 265 0 20 chr17 4251190 4251239 -85253314 - MIR SINE MIR -164 98 51 805 248 48 41 chr17 4251239 4251509 -85253044 + HsTC2c DNA Tc2 457 728 -1 437 175 38 0 chr17 4251925 4252005 -85252548 - LTR32 LTR ERVL -77 394 312 1964 134 31 0 chr17 4252402 4252693 -85251860 - AluSx SINE Alu -12 300 1 218 304 0 0 chr17 4253209 4253278 -85251275 + L2 LINE L2 2712 2780 -534 354 231 51 0 chr17 4253528 4253606 -85250947 + MER3 DNA MER1_type 1 82 -127 223 315 176 13 chr17 4253769 4254007 -85250546 + L2 LINE L2 2921 3197 -116 249 273 87 33 chr17 4254065 4254248 -85250305 - L2 LINE L2 -1 3312 3120 640 183 95 53 chr17 4254318 4254487 -85250066 + FRAM SINE Alu 1 40 0 236 262 182 27 chr17 4255191 4255378 -85249175 - MER112 DNA MER1_type -42 218 3 1122 162 0 0 chr17 4255381 4255554 -85248999 + AluSg/x SINE Alu 126 298 -14 1928 99 4 11 chr17 4255952 4256224 -85248329 - AluSg SINE Alu 0 310 41 2226 123 0 0 chr17 4256400 4256709 -85247844 + AluSx SINE Alu 1 309 -3 1719 105 9 4 chr17 4256822 4257051 -85247502 + AluSq SINE Alu 1 230 -83 346 257 50 30 chr17 4259631 4259732 -85244821 - MIR SINE MIR -155 107 5 1341 177 117 11 chr17 4260165 4260431 -85244122 - AluJb SINE Alu -14 298 5 1919 96 82 11 chr17 4261093 4261373 -85243180 - AluSp SINE Alu -13 300 1 2352 88 3 0 chr17 4261684 4261981 -85242572 - AluSx SINE Alu -14 298 1 1636 101 9 9 chr17 4262409 4262628 -85241925 - AluSq SINE Alu -94 219 1 2299 110 0 0 chr17 4262790 4263089 -85241464 - AluSg SINE Alu -11 299 1 282 255 158 9 chr17 4263512 4263656 -85240897 - MER5A DNA MER1_type -16 162 8 366 162 0 0 chr17 4264143 4264211 -85240342 - L1MA10 LINE L1 -2 6332 6265 2234 101 3 0 chr17 4264211 4264499 -85240054 + AluSp SINE Alu 1 289 -24 1188 155 0 0 chr17 4264504 4264678 -85239875 + AluSg/x SINE Alu 123 296 -16 2016 147 3 3 chr17 4265116 4265416 -85239137 + AluSx SINE Alu 1 300 -12 192 336 75 94 chr17 4266644 4266909 -85237644 - L2 LINE L2 -417 2897 2638 3369 188 26 39 chr17 4317421 4317542 -85187011 - L1MB7 LINE L1 -8 6176 6055 2255 114 0 0 chr17 4317542 4317840 -85186713 + AluSx SINE Alu 1 298 -14 3369 188 26 39 chr17 4317840 4318020 -85186533 - L1MB7 LINE L1 -129 6055 5874 2274 107 7 0 chr17 4318020 4318318 -85186235 + AluSx SINE Alu 1 300 -12 3369 188 26 39 chr17 4318318 4318818 -85185735 - L1MB7 LINE L1 -310 5874 5384 2179 90 0 17 chr17 4318837 4319127 -85185426 + AluSg1 SINE Alu 1 285 -24 1817 125 23 15 chr17 4319272 4319536 -85185017 - AluJb SINE Alu -46 266 1 297 217 56 133 chr17 4319796 4319917 -85184636 + MER58C DNA MER1_type 1 111 -104 2510 77 3 0 chr17 4319917 4320228 -85184325 + AluSp SINE Alu 1 312 -1 297 217 56 133 chr17 4320228 4320249 -85184304 + MER58C DNA MER1_type 111 132 -83 274 137 27 41 chr17 4321492 4321565 -85182988 + (CGGGG)n Simple_repeat Simple_repeat 2 73 0 343 308 34 0 chr17 4322126 4322243 -85182310 - MIR SINE MIR -1 261 141 1736 118 77 83 chr17 4322243 4322556 -85181997 - AluSx SINE Alu -1 311 1 801 185 7 0 chr17 4322557 4322692 -85181861 - AluSq/x SINE Alu -177 136 1 342 309 12 0 chr17 4322692 4322776 -85181777 - MIR SINE MIR -115 147 63 1584 96 9 9 chr17 4323278 4323507 -85181046 - AluSq SINE Alu -84 229 1 31 0 0 0 chr17 4325690 4325721 -85178832 + GC_rich Low_complexity Low_complexity 1 31 0 22 0 0 0 chr17 4326178 4326200 -85178353 + GC_rich Low_complexity Low_complexity 1 22 0 945 137 37 19 chr17 4326635 4326796 -85177757 - AluJo SINE Alu -41 271 108 2330 92 3 0 chr17 4326805 4327108 -85177445 + AluSx SINE Alu 5 308 -4 1314 85 11 26 chr17 4327110 4327299 -85177254 + AluY SINE Alu 126 311 0 1135 116 18 0 chr17 4327562 4327726 -85176827 - AluSq SINE Alu -68 245 79 853 193 0 0 chr17 4328306 4328446 -85176107 - FLAM_C SINE Alu -3 140 1 2240 89 7 7 chr17 4328644 4328958 -85175595 - AluSp SINE Alu 0 314 1 2242 124 7 0 chr17 4329232 4329530 -85175023 - AluSx SINE Alu -12 300 1 667 169 0 17 chr17 4329621 4329739 -85174814 + FLAM_C SINE Alu 2 117 -26 2553 57 0 0 chr17 4329852 4330148 -85174405 - AluY SINE Alu -15 296 1 720 165 0 0 chr17 4330412 4330527 -85174026 - AluSc SINE Alu -52 257 143 1414 264 41 2 chr17 4330673 4331109 -85173444 + L2 LINE L2 2262 2714 -600 633 197 39 0 chr17 4331109 4331236 -85173317 + FLAM_C SINE Alu 2 133 0 2119 209 43 16 chr17 4331236 4331863 -85172690 + L1M4 LINE L1 3126 3769 -2377 2174 82 0 38 chr17 4331865 4332336 -85172217 + AluY SINE Alu 1 460 0 480 164 27 0 chr17 4332351 4332461 -85172092 + GA-rich Low_complexity Low_complexity 1 113 0 1393 115 6 0 chr17 4332591 4332774 -85171779 - AluSx SINE Alu -128 184 1 2233 103 3 3 chr17 4332774 4333076 -85171477 - AluSx SINE Alu -5 307 6 1895 132 24 14 chr17 4333083 4333379 -85171174 - AluSx SINE Alu -13 299 1 397 281 150 22 chr17 4333382 4333695 -85170858 + L2 LINE L2 524 876 -2438 2208 114 0 26 chr17 4333695 4334001 -85170552 - AluSg SINE Alu -7 303 6 2282 106 6 3 chr17 4334028 4334340 -85170213 - AluSq SINE Alu 0 313 1 2223 83 30 17 chr17 4334495 4334795 -85169758 + AluSc SINE Alu 1 304 -5 192 40 0 0 chr17 4335336 4335361 -85169192 + (TAA)n Simple_repeat Simple_repeat 1 25 0 1162 106 5 96 chr17 4335509 4335735 -85168818 + AluSg/x SINE Alu 117 324 0 234 128 0 0 chr17 4335983 4336022 -85168531 + (CTCA)n Simple_repeat Simple_repeat 1 39 0 1306 88 0 0 chr17 4336035 4336205 -85168348 + AluSg/x SINE Alu 135 304 -6 186 362 39 16 chr17 4336241 4336368 -85168185 - L2 LINE L2 -2 3311 3182 766 181 44 111 chr17 4336620 4336890 -85167663 + AluJb SINE Alu 61 312 0 1381 105 0 0 chr17 4337669 4337841 -85166712 + AluSq SINE Alu 36 207 -106 1913 137 26 7 chr17 4338961 4339267 -85165286 + AluSq SINE Alu 1 312 -1 788 103 26 0 chr17 4339521 4339637 -85164916 - LTR8 LTR ERV1 0 691 573 2030 125 26 20 chr17 4339637 4339941 -85164612 - AluSq SINE Alu -6 307 2 1228 206 112 55 chr17 4339983 4340035 -85164518 + MLT1D LTR MaLR 1 49 -456 3156 135 6 21 chr17 4340035 4340570 -85163983 + MER1A DNA MER1_type 1 527 0 1228 206 112 55 chr17 4340570 4340919 -85163634 + MLT1D LTR MaLR 49 425 -80 2231 99 6 29 chr17 4340949 4341263 -85163290 - AluSq SINE Alu -6 307 1 2207 116 0 13 chr17 4341301 4341603 -85162950 - AluSx SINE Alu -14 298 1 1576 157 74 68 chr17 4341674 4341718 -85162835 + MSTD LTR MaLR 1 43 -353 2337 114 0 0 chr17 4341718 4342017 -85162536 - AluSq SINE Alu -12 301 3 1576 157 74 68 chr17 4342017 4342366 -85162187 + MSTD LTR MaLR 43 396 0 2311 107 7 0 chr17 4342392 4342691 -85161862 + AluSx SINE Alu 1 301 -11 366 133 17 0 chr17 4342693 4342753 -85161800 + AluJ/FLAM SINE Alu 1 61 -241 1711 167 38 0 chr17 4342899 4343163 -85161390 - AluJb SINE Alu -22 290 17 1016 178 45 107 chr17 4343163 4343277 -85161276 - L1MC5 LINE L1 -306 7655 7535 2504 73 3 0 chr17 4343277 4343579 -85160974 + AluSp SINE Alu 1 303 -10 1016 178 45 107 chr17 4343579 4343726 -85160827 - L1MC5 LINE L1 -426 7535 7431 2362 100 7 3 chr17 4343726 4344036 -85160517 + AluSq SINE Alu 1 311 -2 1016 178 45 107 chr17 4344036 4344222 -85160331 - L1MC5 LINE L1 -530 7431 7235 1388 167 4 4 chr17 4344241 4344469 -85160084 - AluJb SINE Alu 0 312 85 2332 93 7 0 chr17 4344526 4344826 -85159727 - AluSx SINE Alu -10 302 1 362 256 143 30 chr17 4344826 4344959 -85159594 + LTR67 LTR ERVL 28 175 -382 2202 121 13 0 chr17 4345019 4345325 -85159228 - AluY SINE Alu -1 310 1 676 252 57 24 chr17 4345391 4345601 -85158952 + LTR67 LTR ERVL 334 550 -7 1302 68 6 12 chr17 4345733 4345896 -85158657 - AluSx SINE Alu -150 162 1 241 273 98 35 chr17 4346002 4346145 -85158408 - L1ME LINE L1 -202 5919 5768 2432 81 3 0 chr17 4346154 4346449 -85158104 - AluSp SINE Alu -17 296 1 274 253 13 0 chr17 4346449 4346524 -85158029 - L1ME LINE L1 -2021 5787 5712 1035 176 20 39 chr17 4346539 4346583 -85157970 - L1MB3 LINE L1 0 6183 6140 2231 114 0 10 chr17 4346583 4346746 -85157807 - AluSx SINE Alu -16 296 136 2414 78 7 13 chr17 4346746 4347052 -85157501 - AluY SINE Alu -7 304 1 2231 114 0 10 chr17 4347052 4347187 -85157366 - AluSx SINE Alu -176 136 1 1035 176 20 39 chr17 4347187 4347397 -85157156 - L1MB3 LINE L1 -43 6140 5934 1687 176 4 7 chr17 4347398 4347677 -85156876 + AluJb SINE Alu 3 280 -32 260 51 0 26 chr17 4347681 4347720 -85156833 + (TAAA)n Simple_repeat Simple_repeat 4 41 0 2433 93 0 3 chr17 4347720 4348030 -85156523 + AluSx SINE Alu 1 309 -3 23 0 0 0 chr17 4348030 4348053 -85156500 + AT_rich Low_complexity Low_complexity 1 23 0 366 194 11 43 chr17 4348053 4348146 -85156407 - L1MB3 LINE L1 -232 5948 5859 306 107 0 0 chr17 4348146 4348202 -85156351 - Alu SINE Alu 0 302 247 399 232 20 10 chr17 4348351 4348450 -85156103 - MLT1L LTR MaLR -108 507 408 1386 239 100 25 chr17 4348456 4348807 -85155746 - MLT1F LTR MaLR -4 538 148 2301 121 0 0 chr17 4348807 4349113 -85155440 - AluSx SINE Alu -6 306 1 1386 239 100 25 chr17 4349113 4349192 -85155361 - MLT1F LTR MaLR -394 148 76 2317 109 0 6 chr17 4349303 4349614 -85154939 - AluSq SINE Alu -4 309 1 268 326 22 0 chr17 4349706 4349798 -85154755 - MLT1L LTR MaLR -319 296 203 1965 130 27 0 chr17 4349892 4350185 -85154368 + AluSg SINE Alu 1 301 -9 338 258 57 48 chr17 4350262 4350386 -85154167 + L1ME4a LINE L1 5936 6060 -61 2338 110 0 0 chr17 4350474 4350773 -85153780 + AluSg SINE Alu 1 299 -11 439 367 41 7 chr17 4350902 4351196 -85153357 - L2 LINE L2 -816 2498 2195 756 176 8 0 chr17 4351200 4351353 -85153200 + FLAM_C SINE Alu 2 155 0 26 0 0 0 chr17 4351436 4351462 -85153091 + AT_rich Low_complexity Low_complexity 1 26 0 228 229 0 0 chr17 4351470 4351518 -85153035 - Alu SINE Alu -7 293 246 277 256 12 23 chr17 4351821 4351907 -85152646 + CT-rich Low_complexity Low_complexity 2 86 0 2449 84 0 0 chr17 4352019 4352315 -85152238 + AluSg SINE Alu 1 296 -14 1266 109 0 0 chr17 4352315 4352480 -85152073 + AluSg/x SINE Alu 132 296 -13 2426 100 0 0 chr17 4352491 4352802 -85151751 + AluY SINE Alu 1 311 0 2399 109 0 3 chr17 4352833 4353145 -85151408 + AluSq SINE Alu 1 311 -2 2266 116 0 0 chr17 4353277 4353578 -85150975 + AluSx SINE Alu 5 305 -7 2162 97 47 3 chr17 4353599 4353899 -85150654 + AluSp SINE Alu 1 313 0 1814 171 0 10 chr17 4354018 4354316 -85150237 + AluJo SINE Alu 15 309 -3 344 269 101 8 chr17 4354354 4354473 -85150080 - MIR SINE MIR -13 249 120 375 350 39 15 chr17 4355519 4355725 -85148828 - L1M4 LINE L1 -2693 3453 3243 2270 102 0 7 chr17 4355757 4356060 -85148493 - AluSc SINE Alu -8 301 1 2457 99 0 0 chr17 4356266 4356579 -85147974 - AluSq SINE Alu 0 313 1 808 218 62 6 chr17 4356589 4356768 -85147785 - AluJb SINE Alu 0 312 124 1520 123 20 0 chr17 4357206 4357410 -85147143 + AluSg/x SINE Alu 83 290 -20 323 271 98 53 chr17 4357410 4357543 -85147010 - L1M4 LINE L1 -3652 2494 2356 269 143 0 32 chr17 4357745 4357808 -85146745 + (TTTC)n Simple_repeat Simple_repeat 1 61 0 1031 128 0 11 chr17 4357823 4358002 -85146551 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 646 186 9 0 chr17 4358002 4358116 -85146437 - FLAM_A SINE Alu -19 114 1 236 304 98 64 chr17 4358333 4358629 -85145924 + L2 LINE L2 2966 3271 -1 1657 222 19 91 chr17 4358656 4358729 -85145824 - L2 LINE L2 0 3313 3236 2127 113 0 3 chr17 4358729 4359032 -85145521 + AluSx SINE Alu 1 302 0 1657 222 19 91 chr17 4359032 4359560 -85144993 - L2 LINE L2 -77 3236 2758 741 317 94 39 chr17 4359773 4360136 -85144417 + L2 LINE L2 558 962 -2352 2303 95 0 13 chr17 4360136 4360440 -85144113 - AluSc SINE Alu -9 300 1 741 317 94 39 chr17 4360440 4360618 -85143935 + L2 LINE L2 962 1129 -2185 612 324 76 42 chr17 4360643 4360792 -85143761 - L2 LINE L2 0 3313 3171 1924 116 98 0 chr17 4360792 4361069 -85143484 + AluSx SINE Alu 1 304 -8 612 324 76 42 chr17 4361069 4361090 -85143463 - L2 LINE L2 -142 3171 3152 1640 191 0 23 chr17 4361090 4361225 -85143328 + AluJb SINE Alu 4 141 -171 2373 97 0 0 chr17 4361225 4361525 -85143028 + AluSq SINE Alu 3 302 -11 1640 191 0 23 chr17 4361525 4361692 -85142861 + AluJb SINE Alu 141 299 -13 612 324 76 42 chr17 4361692 4361900 -85142653 - L2 LINE L2 -161 3152 2921 696 162 0 0 chr17 4361958 4362063 -85142490 + FLAM_C SINE Alu 5 109 -34 51 0 0 0 chr17 4362106 4362157 -85142396 + AT_rich Low_complexity Low_complexity 1 51 0 599 329 63 77 chr17 4362160 4362342 -85142211 - L2 LINE L2 -416 2898 2715 2216 128 0 3 chr17 4362342 4362646 -85141907 - AluSx SINE Alu -5 307 5 599 329 63 77 chr17 4362646 4362658 -85141895 - L2 LINE L2 -599 2715 2704 2001 68 89 48 chr17 4362658 4362951 -85141602 - AluY SINE Alu -6 305 1 2033 129 31 0 chr17 4362952 4363238 -85141315 - AluSc SINE Alu -14 295 1 599 329 63 77 chr17 4363238 4363286 -85141267 - L2 LINE L2 -610 2704 2657 937 118 0 22 chr17 4363286 4363422 -85141131 + FLAM_C SINE Alu 1 133 0 599 329 63 77 chr17 4363422 4363855 -85140698 - L2 LINE L2 -657 2657 2228 1255 155 4 52 chr17 4363910 4364142 -85140411 + AluJo SINE Alu 86 306 -6 2238 125 3 0 chr17 4364144 4364455 -85140098 + AluSx SINE Alu 1 312 0 2454 90 0 0 chr17 4364458 4364770 -85139783 + AluSx SINE Alu 1 312 0 830 318 48 3 chr17 4364785 4365118 -85139435 - L2 LINE L2 -1161 2153 1806 1435 285 95 36 chr17 4365131 4365816 -85138737 - L2 LINE L2 -2066 1248 524 1913 126 48 3 chr17 4365819 4366112 -85138441 + AluSx SINE Alu 1 306 -6 402 217 12 0 chr17 4366117 4366200 -85138353 - BC200 scRNA scRNA -114 86 3 452 120 0 0 chr17 4366208 4366283 -85138270 - Alu SINE Alu -3 309 235 322 158 18 0 chr17 4366383 4366440 -85138113 + AluSp SINE Alu 125 182 -121 804 209 19 0 chr17 4366453 4366611 -85137942 - AluJo/FRAM SINE Alu -5 297 137 1305 172 32 48 chr17 4366614 4366864 -85137689 - AluJb SINE Alu -19 293 48 1187 147 0 0 chr17 4367579 4367749 -85136804 + AluSg/x SINE Alu 135 304 -6 2164 76 10 53 chr17 4367752 4368056 -85136497 + AluSc SINE Alu 1 291 -18 189 0 0 0 chr17 4368076 4368097 -85136456 + (TG)n Simple_repeat Simple_repeat 2 22 0 2250 96 0 17 chr17 4368299 4368623 -85135930 - AluY SINE Alu 0 311 1 1060 104 7 0 chr17 4368623 4368767 -85135786 - AluSq/x SINE Alu -167 145 1 909 192 0 0 chr17 4369166 4369322 -85135231 + FRAM SINE Alu 1 156 -20 759 113 96 0 chr17 4369459 4369574 -85134979 - AluSq/x SINE Alu -185 127 2 475 209 55 0 chr17 4370258 4370368 -85134185 - L1MC3 LINE L1 0 7785 7670 1654 112 0 0 chr17 4370412 4370626 -85133927 - AluSg SINE Alu -81 229 16 184 100 0 0 chr17 4371444 4371474 -85133079 + L2 LINE L2 2759 2788 -526 2179 127 3 10 chr17 4371633 4371947 -85132606 - AluSx SINE Alu 0 312 1 1685 139 79 7 chr17 4371951 4372254 -85132299 + Tigger1 DNA MER2_type 182 506 -1912 1143 157 0 0 chr17 4372275 4372441 -85132112 + FRAM SINE Alu 1 158 -18 2857 16 0 0 chr17 4372443 4372751 -85131802 + AluYa5 SINE Alu 1 308 -3 2082 148 3 0 chr17 4372753 4373057 -85131496 + AluSg SINE Alu 1 305 -5 1120 75 0 0 chr17 4373078 4373212 -85131341 + AluSg SINE Alu 1 134 -176 1971 109 4 0 chr17 4373212 4373469 -85131084 + AluSg SINE Alu 1 258 -52 2486 62 7 3 chr17 4373735 4374041 -85130512 + AluY SINE Alu 3 309 -2 1369 124 0 0 chr17 4374041 4374234 -85130319 + AluSg SINE Alu 118 310 0 1247 139 6 0 chr17 4374261 4374434 -85130119 + AluSg SINE Alu 6 179 -131 2005 126 0 0 chr17 4374570 4374840 -85129713 + AluSq SINE Alu 27 296 -17 391 273 70 98 chr17 4374843 4375206 -85129347 - L1MC4 LINE L1 -153 6703 5665 208 257 29 0 chr17 4375751 4375821 -85128732 + GA-rich Low_complexity Low_complexity 1 72 0 1194 122 74 0 chr17 4376443 4376611 -85127942 - AluSp SINE Alu 0 313 126 1763 146 7 17 chr17 4376611 4376905 -85127648 - AluSx SINE Alu -21 291 1 1194 122 74 0 chr17 4376905 4376951 -85127602 - AluSp SINE Alu -187 126 85 958 180 23 6 chr17 4376973 4377011 -85127542 - AluJo SINE Alu -137 175 139 2539 67 0 0 chr17 4377011 4377308 -85127245 - AluSx SINE Alu -15 297 1 958 180 23 6 chr17 4377308 4377441 -85127112 - AluJo SINE Alu -173 139 1 1613 199 3 7 chr17 4377523 4377815 -85126738 + AluJo SINE Alu 16 306 -6 2061 104 0 17 chr17 4377819 4378155 -85126398 + AluSq SINE Alu 1 331 0 345 255 120 32 chr17 4378359 4378575 -85125978 + L1MCa LINE L1 2469 2703 -3723 689 161 36 0 chr17 4378594 4378706 -85125847 + FLAM_A SINE Alu 1 116 -17 317 205 12 36 chr17 4378791 4378874 -85125679 + L1M4 LINE L1 5192 5272 -874 1596 183 47 9 chr17 4379020 4379364 -85125189 - L1M4 LINE L1 -1895 4251 3895 1046 160 28 0 chr17 4379368 4379549 -85125004 - AluSg/x SINE Alu -5 305 120 367 220 0 55 chr17 4379550 4379641 -85124912 - L1M4 LINE L1 -2277 3869 3784 2374 107 0 3 chr17 4379643 4379952 -85124601 - AluSx SINE Alu -4 308 1 2282 116 3 0 chr17 4379963 4380266 -85124287 - AluSp SINE Alu -9 304 1 375 137 0 3 chr17 4380286 4380357 -85124196 + MLT1F LTR MaLR 481 591 -4 2312 113 0 10 chr17 4381038 4381347 -85123206 - AluSx SINE Alu -6 306 1 335 293 188 17 chr17 4381466 4381705 -85122848 - L2 LINE L2 -4 3268 2989 2529 62 0 0 chr17 4381987 4382279 -85122274 - AluY SINE Alu -19 292 1 2208 125 0 3 chr17 4382456 4382761 -85121792 - AluSx SINE Alu -2 310 7 1218 160 18 36 chr17 4382769 4382988 -85121565 - AluJo SINE Alu -1 311 97 2415 87 6 3 chr17 4383143 4383454 -85121099 - AluSx SINE Alu 0 312 1 613 257 11 0 chr17 4383533 4383708 -85120845 - MER104 DNA MER2_type -3 177 1 1089 249 113 32 chr17 4383769 4384307 -85120246 - HAL1b LINE L1 -728 620 39 2038 98 18 4 chr17 4384498 4384774 -85119779 + AluSx SINE Alu 20 299 -13 923 184 17 17 chr17 4385073 4385247 -85119306 + AluJo SINE Alu 121 294 -18 2269 101 7 0 chr17 4385487 4385783 -85118770 - AluY SINE Alu -13 298 1 1086 92 14 0 chr17 4385785 4385927 -85118626 - AluSq/x SINE Alu -169 144 1 252 294 160 50 chr17 4386263 4386382 -85118171 - L2 LINE L2 0 3272 3141 414 245 152 22 chr17 4386710 4386894 -85117659 - L2 LINE L2 -456 2858 2651 533 63 76 13 chr17 4387424 4387503 -85117050 - AluS SINE Alu -228 85 2 306 0 0 0 chr17 4387742 4387776 -85116777 + (CA)n Simple_repeat Simple_repeat 2 35 0 2173 116 0 56 chr17 4387851 4388170 -85116383 + AluSq SINE Alu 7 307 -6 381 222 46 52 chr17 4388370 4388385 -85116168 - Charlie2a DNA MER1_type -12 2850 2836 858 143 0 8 chr17 4388385 4388518 -85116035 - FLAM_C SINE Alu 0 133 2 381 222 46 52 chr17 4388518 4388655 -85115898 - Charlie2a DNA MER1_type -26 2836 2699 * 599 221 32 32 chr17 4388649 4388839 -85115714 - Charlie2a DNA MER1_type -1206 1656 1467 797 259 62 35 chr17 4389034 4389324 -85115229 - Charlie2a DNA MER1_type -2561 301 4 2472 80 0 6 chr17 4390334 4390647 -85113906 + AluSq SINE Alu 1 311 -2 234 62 0 0 chr17 4390787 4390819 -85113734 + (CA)n Simple_repeat Simple_repeat 1 32 0 321 259 129 17 chr17 4391388 4391504 -85113049 - MIR SINE MIR -90 172 44 2263 104 0 3 chr17 4391677 4391975 -85112578 + AluY SINE Alu 5 301 -10 34 24 0 0 chr17 4392050 4392091 -85112462 + AT_rich Low_complexity Low_complexity 1 41 0 1323 147 9 9 chr17 4392242 4392453 -85112100 + AluSx SINE Alu 1 211 -101 366 149 0 0 chr17 4392454 4392517 -85112036 + AluSq/x SINE Alu 78 133 -170 1785 156 32 3 chr17 4392519 4392802 -85111751 + AluSx SINE Alu 7 297 -15 408 288 18 9 chr17 4392802 4392913 -85111640 - MIR SINE MIR -131 131 20 781 206 0 0 chr17 4392931 4393057 -85111496 - FLAM_A SINE Alu -7 126 1 2411 182 42 24 chr17 4393069 4393363 -85111190 - L1MB5 LINE L1 0 6174 5866 2243 119 0 3 chr17 4393363 4393666 -85110887 - AluSx SINE Alu -10 302 1 2411 182 42 24 chr17 4393666 4393876 -85110677 - L1MB5 LINE L1 -308 5866 5661 1459 153 0 36 chr17 4393876 4394125 -85110428 - AluSx SINE Alu 0 312 73 2430 91 0 0 chr17 4394125 4394420 -85110133 - AluY SINE Alu -14 297 1 450 145 0 0 chr17 4394420 4394482 -85110071 - AluSx SINE Alu -230 82 21 2247 117 0 7 chr17 4394504 4394812 -85109741 - AluSg SINE Alu -4 306 1 1676 153 40 45 chr17 4394812 4395086 -85109467 - L1MB5 LINE L1 -513 5667 5394 2241 143 0 0 chr17 4395086 4395394 -85109159 - AluSg SINE Alu -2 308 1 1676 153 40 45 chr17 4395394 4395471 -85109082 - L1MB5 LINE L1 -786 5394 5318 1047 182 0 0 chr17 4395483 4395642 -85108911 - FRAM SINE Alu -17 159 1 1310 240 127 83 chr17 4395685 4396022 -85108531 - L1MC4 LINE L1 0 8042 7721 2457 90 0 10 chr17 4396022 4396334 -85108219 - AluSg SINE Alu -1 309 1 1310 240 127 83 chr17 4396334 4396381 -85108172 - L1MC4 LINE L1 -321 7721 7678 2336 102 3 0 chr17 4396381 4396676 -85107877 - AluSp SINE Alu -17 296 1 1310 240 127 83 chr17 4396676 4396799 -85107754 - L1MC4 LINE L1 -364 7678 7562 1744 137 10 73 chr17 4396799 4397112 -85107441 - AluJb SINE Alu -19 293 1 1310 240 127 83 chr17 4397112 4397406 -85107147 - L1MC4 LINE L1 -480 7562 7204 897 136 0 0 chr17 4398363 4398481 -85106072 + AluJo/FLAM SINE Alu 1 118 -194 2455 74 0 35 chr17 4398481 4398793 -85105760 - AluSx SINE Alu -11 301 1 2235 102 10 0 chr17 4398793 4399087 -85105466 - AluSx SINE Alu -15 297 1 24 0 0 0 chr17 4399100 4399124 -85105429 + AT_rich Low_complexity Low_complexity 1 24 0 707 192 172 0 chr17 4399240 4399391 -85105162 - MIR SINE MIR -69 193 17 2164 98 26 16 chr17 4399586 4399891 -85104662 - AluSx SINE Alu -1 311 4 2636 43 3 0 chr17 4399899 4400200 -85104353 - AluY SINE Alu -9 302 1 23 0 0 0 chr17 4400581 4400604 -85103949 + AT_rich Low_complexity Low_complexity 1 23 0 2000 134 10 0 chr17 4400732 4401022 -85103531 - AluSq SINE Alu -12 301 9 877 153 14 28 chr17 4401025 4401169 -85103384 - AluSg/x SINE Alu -46 266 125 1085 188 62 19 chr17 4401342 4401550 -85103003 - MER20 DNA MER1_type -2 217 1 1992 104 6 71 chr17 4401889 4402215 -85102338 - AluSx SINE Alu -7 305 1 278 222 19 0 chr17 4402263 4402317 -85102236 - MIR SINE MIR -8 254 200 2239 126 0 0 chr17 4402318 4402627 -85101926 - AluSx SINE Alu -3 309 1 2059 145 0 3 chr17 4402636 4402932 -85101621 - AluSx SINE Alu -17 295 1 2266 93 3 3 chr17 4402953 4403242 -85101311 - AluSp SINE Alu -24 289 1 2096 99 58 3 chr17 4403990 4404283 -85100270 - AluSc SINE Alu 0 309 1 2293 108 6 10 chr17 4404887 4405201 -85099352 - AluSp SINE Alu 0 313 1 758 225 55 5 chr17 4405217 4405435 -85099118 + L1MD2 LINE L1 5099 5327 -819 801 213 0 18 chr17 4405435 4405599 -85098954 + FRAM SINE Alu 1 154 -22 1217 178 19 16 chr17 4405599 4405857 -85098696 + L1MD2 LINE L1 5324 5582 -777 22 0 0 0 chr17 4405914 4405936 -85098617 + AT_rich Low_complexity Low_complexity 1 22 0 838 161 0 0 chr17 4405936 4406054 -85098499 - FLAM_C SINE Alu -25 118 1 533 68 0 0 chr17 4406056 4406129 -85098424 - AluSp/q SINE Alu -13 300 228 703 175 186 5 chr17 4406162 4406356 -85098197 + L1MD2 LINE L1 5920 6148 -211 1280 135 122 16 chr17 4406402 4406647 -85097906 - MER44D DNA MER2_type 0 605 280 418 165 22 33 chr17 4406663 4406754 -85097799 - MER44D DNA MER2_type -544 161 72 211 250 17 17 chr17 4407099 4407159 -85097394 + MIR SINE MIR 6 65 -197 2284 99 3 3 chr17 4407161 4407463 -85097090 - AluSq SINE Alu -11 302 1 1807 96 12 0 chr17 4407481 4407721 -85096832 + AluSp SINE Alu 54 296 -17 1394 184 52 42 chr17 4407770 4408079 -85096474 - AluJo SINE Alu 0 312 1 1831 110 43 7 chr17 4408314 4408615 -85095938 + THE1C LTR MaLR 63 374 -1 598 139 0 30 chr17 4408626 4408727 -85095826 - FLAM_C SINE Alu -6 137 40 207 0 0 0 chr17 4408753 4408776 -85095777 + (A)n Simple_repeat Simple_repeat 1 23 0 240 267 43 26 chr17 4409060 4409176 -85095377 - MIR SINE MIR -10 252 135 * 2792 258 110 58 chr17 4409130 4410205 -85094348 + L2 LINE L2 1401 2753 -560 1282 176 200 4 chr17 4410205 4410455 -85094098 + AluJo SINE Alu 1 299 -3 2792 258 110 58 chr17 4410455 4411047 -85093506 + L2 LINE L2 2753 3313 0 503 100 0 0 chr17 4411166 4411236 -85093317 + AluSq SINE Alu 1 70 -243 851 149 0 37 chr17 4411236 4411397 -85093156 + AluSp/q SINE Alu 159 313 0 1452 155 76 49 chr17 4411403 4411707 -85092846 + AluJo SINE Alu 1 312 0 225 30 0 0 chr17 4412008 4412041 -85092512 - L1PA16 LINE L1 -5 6161 6129 2410 80 0 3 chr17 4413242 4413553 -85091000 - AluSg SINE Alu 0 310 1 305 289 11 11 chr17 4413612 4413702 -85090851 - L2 LINE L2 -4 3268 3179 2293 81 0 35 chr17 4413918 4414228 -85090325 + AluSx SINE Alu 1 299 -13 2230 78 26 3 chr17 4414878 4415184 -85089369 - AluSq SINE Alu 0 313 1 372 399 26 21 chr17 4415449 4415642 -85088911 + MIR SINE MIR 21 214 -48 557 200 50 0 chr17 4415732 4415857 -85088696 + MER53 DNA DNA 2 139 -50 1924 132 4 0 chr17 4415857 4416163 -85088390 + AluSx SINE Alu 1 307 0 557 200 50 0 chr17 4416163 4416196 -85088357 + MER53 DNA DNA 139 169 -20 1313 168 0 42 chr17 4416196 4416434 -85088119 - AluJb SINE Alu -1 311 84 889 147 0 0 chr17 4416587 4416723 -85087830 + AluSg/x SINE Alu 176 311 -1 201 39 0 0 chr17 4416723 4416749 -85087804 + (GA)n Simple_repeat Simple_repeat 1 26 0 726 62 0 0 chr17 4416749 4416845 -85087708 + (GGAA)n Simple_repeat Simple_repeat 2 97 0 1956 137 3 13 chr17 4417854 4418154 -85086399 - AluSq SINE Alu -16 297 1 1966 105 14 27 chr17 4418201 4418518 -85086035 - AluSp SINE Alu 0 313 1 270 0 0 0 chr17 4418520 4418550 -85086003 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1716 83 9 0 chr17 4418550 4418779 -85085774 - AluSg1 SINE Alu -29 280 50 937 107 0 0 chr17 4418779 4418910 -85085643 - AluSq/x SINE Alu -178 135 5 1211 132 5 44 chr17 4419023 4419259 -85085294 - AluJb SINE Alu 0 312 85 617 255 25 45 chr17 4419273 4419473 -85085080 + L1MC4a LINE L1 5512 5707 -2101 2402 82 0 13 chr17 4419473 4419790 -85084763 - AluSp SINE Alu 0 313 1 830 58 0 0 chr17 4419801 4419904 -85084649 - AluY SINE Alu -23 288 186 334 228 172 17 chr17 4419904 4420084 -85084469 + L1MC4a LINE L1 5704 5911 -1897 1660 125 95 8 chr17 4420113 4420401 -85084152 + AluSg SINE Alu 1 310 0 1677 152 48 21 chr17 4420407 4420696 -85083857 + AluJb SINE Alu 1 297 -15 2334 82 0 0 chr17 4420702 4420996 -85083557 + AluSc SINE Alu 1 294 -15 198 0 0 0 chr17 4421008 4421030 -85083523 + (CA)n Simple_repeat Simple_repeat 2 23 0 306 353 16 16 chr17 4421307 4421429 -85083124 + MIR3 SINE MIR 73 194 -14 2234 89 7 10 chr17 4421473 4421777 -85082776 + AluSx SINE Alu 1 303 -9 1926 119 20 0 chr17 4421777 4422070 -85082483 + AluSx SINE Alu 1 300 -12 272 255 224 0 chr17 4422722 4422820 -85081733 + MIR3 SINE MIR 36 155 -53 235 246 0 18 chr17 4422809 4422866 -85081687 + MER5A DNA MER1_type 112 167 -22 * 2040 116 3 3 chr17 4422883 4423177 -85081376 - AluSx SINE Alu -18 294 1 279 219 0 0 chr17 4423384 4423425 -85081128 + A-rich Low_complexity Low_complexity 1 41 0 22 0 0 0 chr17 4423432 4423454 -85081099 + GC_rich Low_complexity Low_complexity 1 22 0 23 40 0 0 chr17 4423512 4423537 -85081016 + GC_rich Low_complexity Low_complexity 1 25 0 241 328 0 0 chr17 4423539 4423600 -85080953 + A-rich Low_complexity Low_complexity 1 61 0 2139 101 0 26 chr17 4424108 4424416 -85080137 - AluSx SINE Alu -12 300 1 2306 90 0 3 chr17 4425269 4425570 -85078983 - AluSq SINE Alu -13 300 1 351 277 129 9 chr17 4426183 4426315 -85078238 + MIR3 SINE MIR 37 163 -45 180 274 105 21 chr17 4426231 4426326 -85078227 - L2 LINE L2 -1876 1438 1336 * 375 375 44 13 chr17 4427018 4427247 -85077306 + MIR SINE MIR 22 257 -5 240 363 113 29 chr17 4427480 4427684 -85076869 + L3 LINE CR1 1311 1531 -46 183 328 118 8 chr17 4428721 4428840 -85075713 - L2 LINE L2 -175 3097 2966 204 272 90 0 chr17 4428939 4429046 -85075507 + MIR3 SINE MIR 99 215 -31 248 327 27 0 chr17 4429414 4429524 -85075029 + MIR SINE MIR 23 135 -73 185 196 43 0 chr17 4429659 4429705 -85074848 - MIR SINE MIR -118 144 97 203 83 28 28 chr17 4430126 4430162 -85074391 + (TCC)n Simple_repeat Simple_repeat 3 38 0 458 203 30 0 chr17 4430163 4430296 -85074257 + CT-rich Low_complexity Low_complexity 2 138 0 1085 165 6 0 chr17 4430303 4430473 -85074080 - AluJb SINE Alu -7 305 135 224 30 30 0 chr17 4430474 4430507 -85074046 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 1924 125 0 41 chr17 4430507 4430802 -85073751 - AluSq SINE Alu -30 283 1 1495 101 0 0 chr17 4431135 4431334 -85073219 - AluSc SINE Alu 0 309 111 1889 129 0 37 chr17 4431556 4431873 -85072680 - AluSx SINE Alu 0 306 1 251 291 88 9 chr17 4431912 4432026 -85072527 + MIR SINE MIR 28 147 -71 1058 156 78 0 chr17 4432026 4432205 -85072348 - AluJo SINE Alu -47 265 73 189 246 90 30 chr17 4432508 4432642 -85071911 - L2 LINE L2 -2418 896 755 322 314 105 8 chr17 4433302 4433340 -85071213 - MIR SINE MIR -110 152 119 1748 113 109 22 chr17 4433340 4433615 -85070938 + AluSg SINE Alu 1 299 -11 322 314 105 8 chr17 4433615 4433700 -85070853 - MIR SINE MIR -143 119 17 199 239 0 0 chr17 4433780 4433826 -85070727 - MIR SINE MIR -112 150 105 243 315 55 16 chr17 4433949 4434076 -85070477 + L2 LINE L2 2923 3054 -218 2332 77 0 26 chr17 4434585 4434896 -85069657 - AluSg SINE Alu -7 303 1 2273 92 0 0 chr17 4434896 4435188 -85069365 - AluSx SINE Alu -20 292 1 229 172 0 47 chr17 4435951 4436006 -85068547 - FAM SINE Alu -136 179 126 1516 141 0 0 chr17 4436006 4436226 -85068327 - AluJo SINE Alu -92 220 1 1024 130 59 18 chr17 4436481 4436670 -85067883 - AluSg/x SINE Alu 0 312 121 2273 113 0 0 chr17 4436679 4436990 -85067563 - AluSx SINE Alu -1 311 1 1891 169 0 0 chr17 4437085 4437386 -85067167 + AluJo SINE Alu 1 301 -11 216 0 0 0 chr17 4438738 4438762 -85065791 + (TCCA)n Simple_repeat Simple_repeat 2 25 0 2126 103 7 0 chr17 4438984 4439294 -85065259 + AluSx SINE Alu 1 312 0 1964 129 3 35 chr17 4439313 4439624 -85064929 + AluSx SINE Alu 1 301 -11 204 250 36 27 chr17 4439630 4439742 -85064811 + (TATATG)n Simple_repeat Simple_repeat 4 116 0 306 250 50 0 chr17 4440423 4440503 -85064050 + MIR SINE MIR 82 165 -97 2311 85 3 3 chr17 4440541 4440848 -85063705 - AluSq SINE Alu -6 307 1 1167 246 131 65 chr17 4440853 4441313 -85063240 - MLT1G1 LTR MaLR 0 595 90 1720 172 3 3 chr17 4441313 4441609 -85062944 + AluSx SINE Alu 1 296 -16 1167 246 131 65 chr17 4441609 4441704 -85062849 - MLT1G1 LTR MaLR -505 90 3 801 247 128 45 chr17 4441993 4442127 -85062426 - L2 LINE L2 -1 3312 3191 2293 101 0 0 chr17 4442127 4442424 -85062129 + AluSg SINE Alu 1 297 -13 2109 106 3 10 chr17 4442425 4442727 -85061826 + AluSx SINE Alu 1 300 -12 801 247 128 45 chr17 4442727 4443147 -85061406 - L2 LINE L2 -121 3192 2708 441 293 105 38 chr17 4443152 4443524 -85061029 - MLT1H LTR MaLR 0 549 153 1916 119 10 17 chr17 4443541 4443836 -85060717 - AluSx SINE Alu -19 293 1 249 273 0 91 chr17 4443836 4443957 -85060596 - MLT1H LTR MaLR -419 123 14 1432 195 18 131 chr17 4443970 4444024 -85060529 - L2 LINE L2 -607 2707 2649 617 184 22 44 chr17 4444024 4444160 -85060393 + FLAM_C SINE Alu 1 133 0 1432 195 18 131 chr17 4444160 4444557 -85059996 - L2 LINE L2 -665 2649 2307 850 63 16 8 chr17 4444562 4444688 -85059865 + (TTTC)n Simple_repeat Simple_repeat 2 128 0 2015 96 7 4 chr17 4444689 4444969 -85059584 - AluSq SINE Alu -32 281 1 1902 134 0 7 chr17 4444978 4445268 -85059285 - AluJb SINE Alu -24 288 1 1429 127 0 9 chr17 4445310 4445523 -85059030 + AluSg/x SINE Alu 93 303 -9 388 141 343 20 chr17 4445523 4445622 -85058931 - L2 LINE L2 -1020 2294 2164 1009 132 18 150 chr17 4445989 4446031 -85058522 - L1MB8 LINE L1 0 6184 6138 2115 105 3 0 chr17 4446031 4446317 -85058236 + AluSx SINE Alu 3 289 -23 1009 132 18 150 chr17 4446317 4446600 -85057953 - L1MB8 LINE L1 -46 6138 5902 751 248 34 41 chr17 4446676 4446807 -85057746 - HAL1b LINE L1 -451 897 767 2228 106 3 0 chr17 4446807 4447108 -85057445 - AluSp SINE Alu -11 302 1 751 248 34 41 chr17 4447108 4447271 -85057282 - HAL1b LINE L1 -581 767 605 2101 141 0 0 chr17 4447338 4447650 -85056903 - AluJb SINE Alu 0 312 1 2269 87 3 3 chr17 4447745 4448043 -85056510 - AluSx SINE Alu -14 298 1 180 111 0 0 chr17 4448066 4448093 -85056460 + (TTCC)n Simple_repeat Simple_repeat 3 29 0 1914 148 19 16 chr17 4448661 4448972 -85055581 - AluJb SINE Alu 0 312 1 1900 122 37 10 chr17 4449275 4449571 -85054982 - AluSq SINE Alu -9 304 1 229 351 0 6 chr17 4450801 4450975 -85053578 + (TG)n Simple_repeat Simple_repeat 1 173 0 253 354 54 0 chr17 4451819 4451949 -85052604 - MIR3 SINE MIR -9 199 63 2313 95 0 9 chr17 4453838 4454153 -85050400 - AluSx SINE Alu 0 312 1 424 293 38 15 chr17 4454678 4454811 -85049742 - MIR SINE MIR -38 170 35 2214 92 7 0 chr17 4454828 4455122 -85049431 - AluSq SINE Alu -17 296 1 700 269 23 0 chr17 4455601 4455776 -85048777 + MIR SINE MIR 23 201 -61 212 254 18 0 chr17 4455918 4455973 -85048580 - L3 LINE CR1 -102 1475 1420 255 250 157 0 chr17 4456113 4456223 -85048330 + MIR SINE MIR 38 172 -63 264 204 0 0 chr17 4456411 4456465 -85048088 - L3 LINE CR1 -291 1286 1233 339 282 183 12 chr17 4456882 4457205 -85047348 - L2 LINE L2 -1437 1877 1500 494 261 17 52 chr17 4457473 4457683 -85046870 + MIR SINE MIR 5 203 -59 2332 91 3 0 chr17 4457757 4458064 -85046489 - AluSc SINE Alu -1 308 1 197 307 85 53 chr17 4458102 4458149 -85046404 - L3 LINE CR1 -3 1574 1530 581 256 26 37 chr17 4458149 4458340 -85046213 - MER5A DNA MER1_type 0 189 1 197 307 85 53 chr17 4458340 4458481 -85046072 - L3 LINE CR1 -47 1530 1380 576 282 164 14 chr17 4459968 4460188 -85044365 + MIR SINE MIR 2 254 -8 2187 127 0 0 chr17 4460191 4460499 -85044054 - AluSx SINE Alu -4 308 1 279 294 104 31 chr17 4460884 4461047 -85043506 - L2 LINE L2 -172 3100 2926 497 313 38 0 chr17 4461126 4461263 -85043290 - MIR SINE MIR -89 173 28 2313 90 6 0 chr17 4461263 4461574 -85042979 - AluSq SINE Alu 0 313 1 497 313 38 0 chr17 4461574 4461596 -85042957 - MIR SINE MIR -234 28 8 1420 267 91 9 chr17 4462555 4462770 -85041783 - L2 LINE L2 -1 3312 3116 2286 87 13 0 chr17 4462770 4463070 -85041483 + AluSg SINE Alu 1 304 -6 1420 267 91 9 chr17 4463070 4463607 -85040946 - L2 LINE L2 -197 3116 2500 2222 103 10 0 chr17 4464306 4464607 -85039946 - AluSq SINE Alu -9 304 1 1740 162 7 23 chr17 4465609 4465918 -85038635 + AluSx SINE Alu 1 304 -8 2263 75 17 0 chr17 4467008 4467301 -85037252 - AluSp SINE Alu -15 298 1 917 139 0 7 chr17 4467302 4467439 -85037114 - AluSq/x SINE Alu -177 136 1 252 314 25 16 chr17 4467722 4467843 -85036710 - LTR67 LTR ERVL -2 555 434 2198 112 26 0 chr17 4468087 4468392 -85036161 + AluSp SINE Alu 1 313 0 214 365 52 26 chr17 4468437 4468552 -85036001 + MIR3 SINE MIR 89 206 -2 450 253 106 88 chr17 4468984 4469257 -85035296 - L2 LINE L2 0 3272 2995 2322 64 0 10 chr17 4469585 4469880 -85034673 - AluY SINE Alu -19 292 1 199 211 0 0 chr17 4470788 4470826 -85033727 - MIR SINE MIR -62 146 109 358 252 17 50 chr17 4471223 4471342 -85033211 - MIR SINE MIR -64 144 30 21 36 0 0 chr17 4472170 4472198 -85032355 + GC_rich Low_complexity Low_complexity 1 28 0 304 183 25 33 chr17 4472346 4472466 -85032087 + (CCG)n Simple_repeat Simple_repeat 1 119 0 34 0 0 0 chr17 4472500 4472534 -85032019 + GC_rich Low_complexity Low_complexity 1 34 0 331 303 38 23 chr17 4473405 4473537 -85031016 + MIR3 SINE MIR 23 156 -52 266 385 96 0 chr17 4473759 4473894 -85030659 - MIR3 SINE MIR -13 195 48 494 278 14 4 chr17 4474878 4475034 -85029519 - MIR3 SINE MIR -61 147 3 2388 84 3 0 chr17 4475151 4475461 -85029092 + AluSx SINE Alu 1 311 -1 435 268 43 0 chr17 4475550 4475688 -85028865 + MER103 DNA DNA 21 164 -2 625 175 0 58 chr17 4475882 4476002 -85028551 - AluJo SINE Alu -11 301 189 1975 110 40 0 chr17 4476021 4476293 -85028260 + AluSx SINE Alu 2 284 -28 262 204 0 0 chr17 4476385 4476439 -85028114 + AluJ/monomer SINE Alu 247 300 -1 21 36 0 0 chr17 4476439 4476467 -85028086 + AT_rich Low_complexity Low_complexity 1 28 0 931 169 42 0 chr17 4476496 4476662 -85027891 - AluJo SINE Alu -125 187 15 495 350 104 30 chr17 4476678 4477101 -85027452 + L2 LINE L2 2195 2668 -646 2304 93 0 3 chr17 4477101 4477403 -85027150 - AluSx SINE Alu -11 301 1 495 350 104 30 chr17 4477403 4477519 -85027034 + L2 LINE L2 2668 2774 -540 906 71 0 0 chr17 4477534 4477647 -85026906 + AluSc SINE Alu 1 113 -196 4588 56 15 7 chr17 4477758 4478478 -85026075 + SVA Other Other 316 1157 -229 1061 117 111 6 chr17 4478503 4478674 -85025879 + AluSg/x SINE Alu 102 290 -20 887 299 95 50 chr17 4481163 4481608 -85022945 + HAL1 LINE L1 1060 1558 -949 1806 169 0 0 chr17 4481608 4481903 -85022650 - AluJo SINE Alu -13 299 5 887 299 95 50 chr17 4481903 4482245 -85022308 + HAL1 LINE L1 1558 1883 -624 21 0 0 0 chr17 4482293 4482314 -85022239 + AT_rich Low_complexity Low_complexity 1 21 0 2309 66 7 0 chr17 4482321 4482610 -85021943 + AluY SINE Alu 1 291 -20 200 136 0 68 chr17 4482748 4482792 -85021761 + (TTTTTG)n Simple_repeat Simple_repeat 1 41 0 2065 67 32 21 chr17 4483028 4483313 -85021240 + AluSp SINE Alu 1 288 -25 762 80 0 0 chr17 4483422 4483522 -85021031 + AluSg/x SINE Alu 198 297 -15 2242 102 3 3 chr17 4483654 4483967 -85020586 + AluSp SINE Alu 1 313 0 1975 131 7 0 chr17 4483973 4484263 -85020290 + AluSx SINE Alu 1 292 -20 3945 128 134 43 chr17 4484402 4485813 -85018740 - pTR5 LTR ERV1 0 2438 742 542 189 23 23 chr17 4485880 4486012 -85018541 - LTR45 LTR ERV1 0 525 394 2248 41 24 10 chr17 4486052 4486345 -85018208 + AluY SINE Alu 1 297 -14 2196 240 121 40 chr17 4486700 4486893 -85017660 + HAL1 LINE L1 261 437 -2070 2196 86 0 0 chr17 4486893 4487200 -85017353 + AluSg SINE Alu 1 307 0 2196 240 121 40 chr17 4487200 4488116 -85016437 + HAL1 LINE L1 437 1460 -1047 24 0 0 0 chr17 4488116 4488140 -85016413 + AT_rich Low_complexity Low_complexity 1 24 0 32 0 0 0 chr17 4488345 4488377 -85016176 + AT_rich Low_complexity Low_complexity 1 32 0 611 68 0 0 chr17 4489163 4489237 -85015316 + AluSp/q SINE Alu 216 289 -24 2226 91 44 0 chr17 4489247 4489544 -85015009 + AluSq SINE Alu 1 310 -3 343 276 95 9 chr17 4489626 4489836 -85014717 + L1MC4a LINE L1 6026 6253 -1555 2117 102 0 32 chr17 4489865 4490180 -85014373 - AluY SINE Alu -6 305 1 611 68 0 0 chr17 4490190 4490264 -85014289 - AluSp/q SINE Alu -24 289 216 2365 85 0 0 chr17 4490535 4490842 -85013711 + AluSx SINE Alu 1 307 -5 1520 194 33 0 chr17 4491154 4491453 -85013100 - AluJb SINE Alu 0 308 1 1387 180 3 42 chr17 4494761 4494921 -85009632 - AluJo SINE Alu -19 293 147 2281 86 0 19 chr17 4494921 4495235 -85009318 - AluSq SINE Alu -5 308 1 1387 180 3 42 chr17 4495235 4495358 -85009195 - AluJo SINE Alu -165 147 21 2294 80 3 13 chr17 4495540 4495840 -85008713 + AluSx SINE Alu 1 297 -15 548 314 105 0 chr17 4496302 4496493 -85008060 + MIR SINE MIR 42 252 -10 2007 134 7 3 chr17 4496501 4496807 -85007746 + AluJb SINE Alu 1 307 -5 2197 101 7 0 chr17 4496991 4497288 -85007265 + AluSx SINE Alu 1 299 -13 2298 119 0 0 chr17 4497817 4498128 -85006425 + AluSx SINE Alu 1 311 -1 527 354 134 29 chr17 4498371 4498848 -85005705 - L3 LINE CR1 -50 1527 1001 658 51 0 0 chr17 4499260 4499339 -85005214 + AluSq/x SINE Alu 57 135 -178 2415 87 0 0 chr17 4499339 4499650 -85004903 + AluSq SINE Alu 1 311 -2 553 155 124 72 chr17 4499743 4499937 -85004616 + MER46A DNA MER2_type 32 235 -1 244 281 25 8 chr17 4500101 4500142 -85004411 - HAL1b LINE L1 0 1348 1309 1800 153 14 0 chr17 4500142 4500417 -85004136 + AluJo SINE Alu 1 279 -33 291 28 0 0 chr17 4500418 4500454 -85004099 + (CAAT)n Simple_repeat Simple_repeat 4 39 0 244 281 25 8 chr17 4500454 4500531 -85004022 - HAL1b LINE L1 -38 1310 1226 1701 181 0 20 chr17 4500536 4500835 -85003718 - AluJb SINE Alu -19 293 1 251 197 0 45 chr17 4502987 4503053 -85001500 + (CTGGGG)n Simple_repeat Simple_repeat 2 64 0 2022 128 3 3 chr17 4503122 4503420 -85001133 - AluSx SINE Alu -14 298 1 448 304 131 0 chr17 4503621 4503835 -85000718 + LTR33 LTR ERVL 41 282 -239 330 260 30 0 chr17 4503909 4504009 -85000544 + LTR33 LTR ERVL 417 519 -2 360 256 103 0 chr17 4504415 4504532 -85000021 + MIR3 SINE MIR 58 186 -22 275 239 147 91 chr17 4505440 4505725 -84998828 + L2 LINE L2 2950 3250 -22 2078 112 0 3 chr17 4507461 4507795 -84996758 - AluSx SINE Alu 0 333 1 182 189 0 0 chr17 4509130 4509167 -84995386 + L2 LINE L2 3028 3064 -208 244 236 0 42 chr17 4509267 4509339 -84995214 - L3 LINE CR1 -108 1469 1401 278 270 79 53 chr17 4510176 4510328 -84994225 + MIR3 SINE MIR 3 158 -50 240 357 29 53 chr17 4510337 4510508 -84994045 - MIR SINE MIR -22 240 74 242 388 165 0 chr17 4510759 4510965 -84993588 - L2 LINE L2 -95 3177 2938 218 284 154 79 chr17 4511337 4511695 -84992858 - L2 LINE L2 -917 2397 1980 2441 87 0 0 chr17 4511695 4512007 -84992546 + AluSx SINE Alu 1 312 0 218 284 154 79 chr17 4512007 4512208 -84992345 - L2 LINE L2 -1333 1981 1796 245 340 32 53 chr17 4512984 4513172 -84991381 - MIR3 SINE MIR -20 188 5 239 338 64 39 chr17 4514884 4515118 -84989435 + L2 LINE L2 2170 2409 -905 258 32 0 0 chr17 4515418 4515449 -84989104 + (TC)n Simple_repeat Simple_repeat 2 32 0 21 0 0 0 chr17 4517034 4517055 -84987498 + GC_rich Low_complexity Low_complexity 1 21 0 25 65 0 0 chr17 4517465 4517511 -84987042 + GC_rich Low_complexity Low_complexity 1 46 0 322 237 29 58 chr17 4519882 4520021 -84984532 - MIR3 SINE MIR -73 135 1 183 287 73 45 chr17 4520157 4520404 -84984149 + L2 LINE L2 2021 2274 -1040 405 0 0 0 chr17 4520579 4520624 -84983929 + (CA)n Simple_repeat Simple_repeat 1 45 0 212 355 86 0 chr17 4520649 4520742 -84983811 + L2 LINE L2 3209 3309 -4 271 287 104 9 chr17 4520772 4520887 -84983666 - L2 LINE L2 -789 2525 2400 2130 119 0 34 chr17 4520894 4521214 -84983339 + AluSx SINE Alu 1 309 -3 2296 94 0 7 chr17 4522533 4522842 -84981711 + AluSx SINE Alu 1 307 -5 1331 34 0 53 chr17 4522879 4523088 -84981465 + SVA Other Other 1 198 -1188 868 126 47 126 chr17 4523620 4523786 -84980767 - Charlie5 DNA MER1_type 0 2585 2448 2245 83 3 17 chr17 4523786 4524088 -84980465 + AluSx SINE Alu 1 298 -14 868 126 47 126 chr17 4524088 4524198 -84980355 - Charlie5 DNA MER1_type -137 2448 2331 275 357 170 6 chr17 4524251 4524433 -84980120 + MIR SINE MIR 45 256 -6 205 282 103 0 chr17 4524790 4524868 -84979685 - MIR SINE MIR -62 146 61 199 250 225 15 chr17 4525690 4525815 -84978738 - MIR SINE MIR -68 140 19 180 345 58 23 chr17 4526705 4526792 -84977761 + L2 LINE L2 2987 3076 -196 1051 216 11 42 chr17 4529111 4529375 -84975178 - MIR SINE MIR 0 262 7 345 294 43 49 chr17 4529998 4530161 -84974392 + MER5A DNA MER1_type 24 185 -4 208 306 69 0 chr17 4530152 4530224 -84974329 - MIR3 SINE MIR -39 169 93 * 1027 166 0 0 chr17 4530983 4531146 -84973407 + AluJb SINE Alu 134 296 -16 216 365 78 17 chr17 4531155 4531385 -84973168 - L2 LINE L2 -1544 1770 1527 195 222 37 19 chr17 4532116 4532170 -84972383 - L2 LINE L2 -212 3060 3006 307 310 77 36 chr17 4532561 4532730 -84971823 + MIR3 SINE MIR 3 183 -63 230 337 12 0 chr17 4532939 4533022 -84971531 - L2 LINE L2 -213 3059 2976 384 282 46 23 chr17 4533632 4533763 -84970790 + MIR SINE MIR 66 199 -63 357 281 0 0 chr17 4534324 4534459 -84970094 + (TG)n Simple_repeat Simple_repeat 1 135 0 294 414 37 0 chr17 4536934 4537096 -84967457 - MIR SINE MIR -59 203 36 2339 99 0 3 chr17 4537723 4538036 -84966517 + AluSx SINE Alu 1 312 0 370 325 20 54 chr17 4538154 4538357 -84966196 - L2 LINE L2 -85 3187 2992 227 222 22 74 chr17 4538411 4538546 -84966007 + L1MEd LINE L1 73 200 -5919 295 178 22 44 chr17 4538616 4538706 -84965847 - L1MC5 LINE L1 -35 7926 7839 783 304 66 68 chr17 4538939 4539068 -84965485 + L1MEd LINE L1 583 711 -5408 2173 86 10 3 chr17 4539068 4539360 -84965193 + AluSq SINE Alu 1 294 -19 783 304 66 68 chr17 4539360 4539716 -84964837 + L1MEd LINE L1 711 1067 -5052 188 391 30 17 chr17 4539782 4539935 -84964618 - L2 LINE L2 -455 2859 2701 2539 52 3 0 chr17 4539935 4540245 -84964308 + AluY SINE Alu 1 311 0 188 391 30 17 chr17 4540245 4540321 -84964232 - L2 LINE L2 -613 2701 2627 322 263 30 20 chr17 4541758 4541857 -84962696 + MIR3 SINE MIR 56 155 -53 437 262 111 8 chr17 4542415 4542541 -84962012 + MIR SINE MIR 13 151 -111 267 375 0 0 chr17 4542724 4542828 -84961725 + L2 LINE L2 2988 3091 -181 502 306 61 25 chr17 4543142 4543250 -84961303 - MIR SINE MIR -24 238 118 1902 207 39 42 chr17 4543250 4543609 -84960944 - MER63B DNA MER1_type -629 433 74 2207 105 0 0 chr17 4543609 4543905 -84960648 + AluSx SINE Alu 1 296 -16 1902 207 39 42 chr17 4543905 4543979 -84960574 - MER63B DNA MER1_type -988 74 1 502 306 61 25 chr17 4543979 4544066 -84960487 - MIR SINE MIR -144 118 36 227 191 32 32 chr17 4544228 4544291 -84960262 + CT-rich Low_complexity Low_complexity 1 63 0 956 275 53 77 chr17 4544591 4544849 -84959704 + L2 LINE L2 2702 2964 -349 2086 107 3 10 chr17 4544849 4545147 -84959406 + AluSx SINE Alu 1 296 -16 956 275 53 77 chr17 4545147 4545178 -84959375 + L2 LINE L2 2964 2994 -319 1776 111 96 4 chr17 4545178 4545448 -84959105 + AluSx SINE Alu 1 295 -17 956 275 53 77 chr17 4545448 4545702 -84958851 + L2 LINE L2 2994 3307 -6 394 243 59 52 chr17 4545766 4545902 -84958651 + MIR3 SINE MIR 12 148 -60 532 272 26 101 chr17 4545904 4546095 -84958458 + MIR SINE MIR 2 169 -93 2101 127 3 0 chr17 4546095 4546394 -84958159 + AluSx SINE Alu 1 300 -12 532 272 26 101 chr17 4546394 4546470 -84958083 + MIR SINE MIR 169 249 -13 457 258 8 32 chr17 4547152 4547276 -84957277 + MIR3 SINE MIR 7 127 -81 573 270 100 15 chr17 4547375 4547575 -84956978 + MIR SINE MIR 46 262 0 364 265 39 10 chr17 4547581 4547683 -84956870 + L3 LINE CR1 1399 1503 -74 199 111 44 0 chr17 4547864 4547909 -84956644 - L2 LINE L2 -212 3060 3014 2319 109 0 0 chr17 4548013 4548325 -84956228 + AluSq SINE Alu 1 312 -1 203 352 48 8 chr17 4548346 4548471 -84956082 - L2 LINE L2 -481 2833 2704 300 409 48 0 chr17 4548825 4549033 -84955520 + L1ME2 LINE L1 4572 4789 -1357 1073 273 74 34 chr17 4549196 4549716 -84954837 + L1ME2 LINE L1 5247 5802 -362 2261 100 0 0 chr17 4549716 4550015 -84954538 - AluSq SINE Alu -14 299 1 1073 273 74 34 chr17 4550015 4550112 -84954441 + L1ME2 LINE L1 5802 5894 -270 2016 102 3 56 chr17 4550147 4550470 -84954083 - AluSq SINE Alu -7 306 1 1587 179 3 14 chr17 4550479 4550622 -84953931 - AluJo SINE Alu -25 287 144 2304 99 0 0 chr17 4550622 4550926 -84953627 - AluSg1 SINE Alu -5 304 1 1587 179 3 14 chr17 4550926 4551072 -84953481 - AluJo SINE Alu -168 144 1 1887 112 63 0 chr17 4551101 4551386 -84953167 + AluSg SINE Alu 1 303 -7 520 189 24 0 chr17 4553782 4553909 -84950644 + (TCCA)n Simple_repeat Simple_repeat 3 132 0 181 299 112 28 chr17 4554122 4554229 -84950324 - MIR SINE MIR -72 136 21 258 250 21 31 chr17 4558370 4558466 -84946087 + CT-rich Low_complexity Low_complexity 5 99 0 213 219 183 0 chr17 4559413 4559495 -84945058 + MIR SINE MIR 21 117 -91 1712 136 19 30 chr17 4560461 4560498 -84944055 + LTR47A LTR ERVL 13 49 -403 2050 99 3 65 chr17 4560498 4560820 -84943733 - AluSx SINE Alu -10 302 1 1712 136 19 30 chr17 4560820 4561177 -84943376 + LTR47A LTR ERVL 49 452 0 2118 120 0 13 chr17 4561198 4561514 -84943039 - AluSx SINE Alu 0 312 1 1745 221 85 38 chr17 4561523 4562133 -84942420 - L1M4 LINE L1 -892 5254 4616 1931 148 3 0 chr17 4562162 4562460 -84942093 + AluSx SINE Alu 1 299 -13 261 0 0 0 chr17 4562493 4562522 -84942031 + (TA)n Simple_repeat Simple_repeat 2 30 0 2334 79 0 7 chr17 4562522 4562825 -84941728 - AluSc SINE Alu -8 301 1 705 215 77 127 chr17 4562825 4563230 -84941323 + MLT1G3 LTR MaLR 106 595 0 2056 108 0 26 chr17 4563307 4563612 -84940941 + AluSx SINE Alu 1 297 -15 1828 80 0 4 chr17 4563744 4563983 -84940570 + AluY SINE Alu 1 238 -73 234 0 0 0 chr17 4563986 4564012 -84940541 + (A)n Simple_repeat Simple_repeat 1 26 0 322 73 18 18 chr17 4564733 4564788 -84939765 + (TG)n Simple_repeat Simple_repeat 2 56 0 2078 111 10 3 chr17 4565138 4565436 -84939117 + AluSx SINE Alu 1 300 -12 2412 81 0 0 chr17 4565822 4566129 -84938424 - AluSx SINE Alu -5 307 1 945 304 84 35 chr17 4566129 4566643 -84937910 - L1MC4a LINE L1 -977 6831 6293 2182 99 0 3 chr17 4566645 4566939 -84937614 + AluSx SINE Alu 1 293 -19 790 270 43 13 chr17 4566942 4567175 -84937378 - L1MC4a LINE L1 -2001 5807 5568 568 212 150 16 chr17 4567178 4567371 -84937182 - L1MC4a LINE L1 -2258 5550 5332 2230 97 0 22 chr17 4567374 4567694 -84936859 - AluSp SINE Alu 0 313 1 204 125 0 0 chr17 4567716 4567748 -84936805 + (TG)n Simple_repeat Simple_repeat 2 33 0 1894 120 11 4 chr17 4567748 4568024 -84936529 - AluSx SINE Alu -34 278 1 1879 160 3 13 chr17 4568055 4568362 -84936191 + AluJb SINE Alu 1 304 -8 452 313 28 17 chr17 4568380 4568559 -84935994 + L2 LINE L2 2550 2730 -584 741 193 7 0 chr17 4568628 4568768 -84935785 - LTR64 LTR ERVK -415 143 3 214 254 73 0 chr17 4568874 4568929 -84935624 + L2 LINE L2 3148 3206 -66 2361 58 3 26 chr17 4568950 4569261 -84935292 - AluY SINE Alu -7 304 1 2072 106 3 7 chr17 4571157 4571460 -84933093 + AluSq SINE Alu 1 302 -11 24 32 0 0 chr17 4571484 4571515 -84933038 + AT_rich Low_complexity Low_complexity 1 31 0 2175 106 0 7 chr17 4571520 4571821 -84932732 - AluSq SINE Alu -14 299 1 1154 150 19 33 chr17 4571825 4571988 -84932565 - AluJo SINE Alu -18 294 130 233 0 62 0 chr17 4571988 4572020 -84932533 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2024 71 18 18 chr17 4572020 4572302 -84932251 - AluY SINE Alu -29 282 1 1154 150 19 33 chr17 4572302 4572350 -84932203 - AluJo SINE Alu -180 132 85 637 170 30 0 chr17 4572419 4572519 -84932034 - U6 snRNA snRNA -4 103 1 2026 125 0 0 chr17 4572625 4572922 -84931631 + AluSx SINE Alu 1 297 -15 2176 101 7 3 chr17 4572957 4573265 -84931288 + AluSg SINE Alu 1 309 -1 397 181 21 0 chr17 4573265 4573359 -84931194 + GA-rich Low_complexity Low_complexity 1 96 0 870 71 11 50 chr17 4573361 4573543 -84931010 + (GAAA)n Simple_repeat Simple_repeat 2 176 0 505 285 85 41 chr17 4573553 4573848 -84930705 - HAL1 LINE L1 -84 2423 2116 897 300 98 23 chr17 4573899 4574390 -84930163 + MLT1G LTR MaLR 10 555 0 1666 236 83 48 chr17 4574391 4574934 -84929619 + L2 LINE L2 2381 2942 -372 2356 266 123 36 chr17 4574942 4576162 -84928391 - HAL1 LINE L1 -439 2068 743 1759 141 19 44 chr17 4576178 4576582 -84927971 - AluSp SINE Alu 0 396 1 240 261 11 45 chr17 4576598 4576686 -84927867 - HAL1 LINE L1 -1783 724 640 357 338 109 42 chr17 4576714 4577117 -84927436 - HAL1 LINE L1 -2076 431 2 379 296 23 38 chr17 4577261 4577393 -84927160 + MIR SINE MIR 133 262 0 181 263 0 0 chr17 4577780 4577818 -84926735 + MIR SINE MIR 42 79 -129 526 240 113 70 chr17 4577825 4578054 -84926499 + MIR SINE MIR 20 258 -4 2115 84 0 7 chr17 4578409 4578722 -84925831 - AluSq SINE Alu 0 313 3 2338 93 0 0 chr17 4578854 4579156 -84925397 - AluSx SINE Alu -10 302 1 1220 242 31 92 chr17 4579558 4580132 -84924421 + MER34 LTR ERV1 1 539 -3 2134 91 14 0 chr17 4581568 4581855 -84922698 - AluSp SINE Alu -22 291 1 1874 103 46 4 chr17 4582075 4582356 -84922197 + AluSq SINE Alu 1 293 -20 2382 89 0 6 chr17 4582509 4582822 -84921731 + AluSx SINE Alu 1 311 -1 29 0 0 0 chr17 4583198 4583227 -84921326 + AT_rich Low_complexity Low_complexity 1 29 0 2260 90 0 3 chr17 4583227 4583526 -84921027 + AluSq SINE Alu 1 298 -15 1252 151 5 23 chr17 4583696 4583914 -84920639 + AluJb SINE Alu 85 298 -14 231 188 0 0 chr17 4584027 4584075 -84920478 + GA-rich Low_complexity Low_complexity 4 51 0 614 237 132 26 chr17 4585133 4585323 -84919230 - MER63A DNA MER1_type 0 210 1 3652 128 11 5 chr17 4586311 4586864 -84917689 + L1PA15 LINE L1 5606 6161 -4 1079 145 0 31 chr17 4586962 4587155 -84917398 - AluSg/x SINE Alu -5 305 119 473 209 18 67 chr17 4587174 4587364 -84917189 - MER106B DNA MER1_type -5 1054 856 2008 84 4 0 chr17 4587364 4587625 -84916928 + AluSq SINE Alu 1 262 -51 225 0 0 0 chr17 4587627 4587652 -84916901 + (TAA)n Simple_repeat Simple_repeat 2 26 0 473 209 18 67 chr17 4587652 4587720 -84916833 - MER106B DNA MER1_type -204 855 1 2045 117 10 10 chr17 4587816 4588114 -84916439 + AluSx SINE Alu 1 298 -14 214 346 55 16 chr17 4589606 4589733 -84914820 + L2 LINE L2 3180 3311 -2 1633 139 17 50 chr17 4590076 4590378 -84914175 - AluJb SINE Alu -20 292 1 460 263 2 14 chr17 4590406 4590543 -84914010 - MIR SINE MIR -62 146 16 203 354 0 0 chr17 4593479 4593561 -84910992 + G-rich Low_complexity Low_complexity 6 87 0 262 139 0 0 chr17 4593981 4594024 -84910529 - MIR SINE MIR -9 253 211 195 220 0 0 chr17 4594720 4594770 -84909783 + (CACG)n Simple_repeat Simple_repeat 2 51 0 2089 97 3 32 chr17 4595349 4595659 -84908894 - AluSg SINE Alu -9 301 1 226 333 37 37 chr17 4595732 4595867 -84908686 + L2 LINE L2 3129 3263 -9 2174 119 0 0 chr17 4596058 4596370 -84908183 - AluSx SINE Alu 0 312 1 1318 268 106 34 chr17 4596505 4597056 -84907497 - L1MC4a LINE L1 -588 5563 5396 2223 102 0 3 chr17 4597056 4597361 -84907192 - AluSq SINE Alu -9 304 1 1318 268 106 34 chr17 4597361 4597381 -84907172 - L1MC4a LINE L1 -755 5396 5379 621 221 40 137 chr17 4597577 4597703 -84906850 + MLT1F-int LTR MaLR 1078 1215 -156 2124 113 10 0 chr17 4597703 4598004 -84906549 + AluSq SINE Alu 3 306 -7 621 221 40 137 chr17 4598004 4598198 -84906355 + MLT1F-int LTR MaLR 1215 1367 -4 1613 217 36 74 chr17 4598204 4598651 -84905902 + MLT1F LTR MaLR 2 431 -111 1061 191 11 0 chr17 4598677 4598866 -84905687 - AluJb SINE Alu -8 304 114 2057 112 0 19 chr17 4598994 4599328 -84905225 - AluSx SINE Alu 0 312 3 1601 171 27 13 chr17 4599854 4599978 -84904575 + AluJo SINE Alu 3 124 -188 2208 107 0 3 chr17 4599978 4600286 -84904267 + AluSx SINE Alu 1 307 -5 1601 171 27 13 chr17 4600286 4600459 -84904094 + AluJo SINE Alu 124 304 -8 2151 88 14 10 chr17 4600529 4600826 -84903727 + AluSx SINE Alu 1 298 -14 1113 174 19 31 chr17 4601389 4601679 -84902874 - MER89 LTR ERV1 -170 389 1 773 201 41 106 chr17 4601679 4601972 -84902581 - L1ME LINE L1 -628 5538 5265 758 83 0 0 chr17 4602121 4602217 -84902336 + AluSc SINE Alu 201 296 -13 23 0 0 0 chr17 4603139 4603162 -84901391 + AT_rich Low_complexity Low_complexity 1 23 0 205 276 0 26 chr17 4604008 4604084 -84900469 + (TG)n Simple_repeat Simple_repeat 1 74 0 230 274 0 0 chr17 4608875 4608937 -84895616 + C-rich Low_complexity Low_complexity 6 67 0 2063 92 0 27 chr17 4609930 4610222 -84894331 - AluSg SINE Alu -26 284 1 1974 133 10 0 chr17 4610710 4611004 -84893549 - AluSg SINE Alu -13 297 1 271 317 125 0 chr17 4611457 4611577 -84892976 + MIR SINE MIR 95 229 -33 200 184 0 0 chr17 4612592 4612630 -84891923 + (GGCTG)n Simple_repeat Simple_repeat 4 41 0 2061 104 9 35 chr17 4613292 4613610 -84890943 + AluSq SINE Alu 1 310 -3 241 242 13 41 chr17 4614491 4614603 -84889950 + MIR SINE MIR 10 114 -94 * 311 349 61 28 chr17 4614586 4614798 -84889755 - MIR SINE MIR -3 259 41 744 156 0 0 chr17 4614825 4614934 -84889619 - FRAM SINE Alu -58 118 10 2310 92 0 0 chr17 4615224 4615519 -84889034 + AluSq SINE Alu 1 295 -18 2018 109 46 0 chr17 4616635 4616919 -84887634 - AluSx SINE Alu -15 297 1 198 208 21 21 chr17 4616990 4617038 -84887515 - MIR SINE MIR -186 76 29 1192 234 72 16 chr17 4617221 4617528 -84887025 + MER33 DNA MER1_type 1 324 0 320 311 116 66 chr17 4619490 4619792 -84884761 - L2 LINE L2 0 3313 2997 558 300 191 10 chr17 4619917 4620304 -84884249 - L2 LINE L2 -537 2777 2321 2282 89 0 7 chr17 4621109 4621413 -84883140 - AluSq SINE Alu -11 302 1 1688 186 0 0 chr17 4621414 4621723 -84882830 - AluJo SINE Alu 0 312 2 992 248 66 106 chr17 4624952 4625327 -84879226 + L1ME3A LINE L1 5690 6042 -128 2210 103 6 10 chr17 4625327 4625639 -84878914 - AluSq SINE Alu -2 311 1 992 248 66 106 chr17 4625639 4625764 -84878789 + L1ME3A LINE L1 6042 6170 0 359 299 86 0 chr17 4625891 4626008 -84878545 - MER5A DNA MER1_type -4 185 59 612 323 50 0 chr17 4626749 4626969 -84877584 + MIR SINE MIR 26 256 -6 213 39 0 0 chr17 4627041 4627067 -84877486 + (CA)n Simple_repeat Simple_repeat 1 26 0 215 227 0 0 chr17 4627089 4627133 -84877420 + (TTCA)n Simple_repeat Simple_repeat 2 45 0 634 241 59 18 chr17 4627134 4627304 -84877249 + MER5B DNA MER1_type 2 178 0 202 254 8 164 chr17 4627317 4627439 -84877114 + MER5B DNA MER1_type 17 119 -59 2225 104 0 3 chr17 4627446 4627744 -84876809 - AluSq SINE Alu -16 297 1 372 253 0 0 chr17 4628068 4628151 -84876402 - ERVL LTR ERVL -3757 2007 1925 824 77 0 0 chr17 4628160 4628264 -84876289 - AluSg/x SINE Alu -10 300 197 548 293 95 31 chr17 4628301 4628436 -84876117 + HERVL LTR ERVL 2333 2458 -3196 2091 94 18 0 chr17 4628436 4628795 -84875758 - AluSx SINE Alu 0 364 1 548 293 95 31 chr17 4628795 4628843 -84875710 + HERVL LTR ERVL 2458 2501 -3153 2217 121 0 0 chr17 4628843 4629148 -84875405 - AluSx SINE Alu -7 305 1 548 293 95 31 chr17 4629148 4629256 -84875297 + HERVL LTR ERVL 2501 2645 -3009 572 259 30 55 chr17 4629281 4629517 -84875036 + LTR67 LTR ERVL 328 557 0 2171 93 43 10 chr17 4630030 4630332 -84874221 - AluSx SINE Alu 0 312 1 207 0 0 0 chr17 4630342 4630365 -84874188 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 1367 94 0 6 chr17 4630387 4630568 -84873985 - AluSp SINE Alu -133 180 1 1504 213 94 43 chr17 4630642 4631154 -84873399 - LTR55 LTR ERV -10 538 1 1622 175 11 0 chr17 4631304 4631573 -84872980 - AluJo SINE Alu -4 308 37 2062 140 3 13 chr17 4631610 4631925 -84872628 - AluSx SINE Alu 0 312 1 2221 108 0 3 chr17 4632092 4632397 -84872156 - AluSx SINE Alu -5 307 4 265 143 200 0 chr17 4632424 4632494 -84872059 - MER105 DNA DNA 0 204 121 2108 107 3 10 chr17 4632890 4633189 -84871364 + AluSx SINE Alu 3 299 -13 649 268 49 0 chr17 4633220 4633444 -84871109 + L1MB2 LINE L1 5936 6170 -1 282 56 0 0 chr17 4633586 4633622 -84870931 + (TG)n Simple_repeat Simple_repeat 1 36 0 775 172 8 0 chr17 4634272 4634394 -84870159 - FLAM_C SINE Alu -18 125 3 210 37 0 0 chr17 4634425 4634452 -84870101 + (TA)n Simple_repeat Simple_repeat 1 27 0 2327 82 0 0 chr17 4634452 4634746 -84869807 - AluSg SINE Alu -16 294 1 23 33 0 0 chr17 4636367 4636397 -84868156 + AT_rich Low_complexity Low_complexity 1 30 0 2420 222 65 29 chr17 4636464 4637053 -84867500 - L1ME1 LINE L1 -108 6058 5435 795 88 0 0 chr17 4637053 4637166 -84867387 + (TG)n Simple_repeat Simple_repeat 2 114 0 2420 222 65 29 chr17 4637166 4637324 -84867229 - L1ME1 LINE L1 -731 5435 5284 819 149 0 0 chr17 4637324 4637458 -84867095 - AluSp/q SINE Alu -5 308 175 270 0 0 0 chr17 4638276 4638306 -84866247 + (TG)n Simple_repeat Simple_repeat 1 30 0 526 190 0 74 chr17 4638307 4638478 -84866075 - MIR SINE MIR -26 236 82 1585 115 27 103 chr17 4638993 4639324 -84865229 + AluYb8 SINE Alu 4 309 -9 206 264 217 39 chr17 4640221 4640350 -84864203 - L2 LINE L2 -219 3053 2902 2265 92 3 0 chr17 4690875 4691180 -84813373 - AluY SINE Alu -5 306 1 29 0 0 0 chr17 4691250 4691279 -84813274 + AT_rich Low_complexity Low_complexity 1 29 0 579 157 10 0 chr17 4691361 4691463 -84813090 - AluJb SINE Alu 0 312 210 720 155 0 0 chr17 4691631 4691734 -84812819 - FRAM SINE Alu -37 139 37 451 93 0 13 chr17 4691734 4691809 -84812744 + L1M4 LINE L1 5415 5488 -690 2022 128 7 3 chr17 4691809 4692107 -84812446 + AluSx SINE Alu 1 299 -13 848 142 8 0 chr17 4692117 4692251 -84812302 + AluJb SINE Alu 1 135 -177 2172 99 14 3 chr17 4692251 4692544 -84812009 + AluSg SINE Alu 1 296 -14 363 149 15 0 chr17 4692992 4693059 -84811494 - AluJ/FLAM SINE Alu -230 72 5 849 178 33 75 chr17 4693102 4693141 -84811412 - MIR SINE MIR -35 227 188 2321 83 3 0 chr17 4693141 4693441 -84811112 - AluSx SINE Alu -11 301 1 849 178 33 75 chr17 4693441 4693615 -84810938 - MIR SINE MIR -74 188 23 1550 98 5 0 chr17 4694014 4694219 -84810334 + AluSx SINE Alu 1 206 -106 800 196 0 18 chr17 4695726 4695889 -84808664 - AluSq SINE Alu -153 160 1 253 302 113 19 chr17 4695895 4696001 -84808552 - MIR3 SINE MIR -33 175 60 356 301 30 23 chr17 4697094 4697227 -84807326 - MIR SINE MIR -116 146 13 1358 132 0 18 chr17 4698500 4698720 -84805833 - AluSq SINE Alu -9 304 89 1100 107 153 11 chr17 4698721 4698898 -84805655 - AluSx SINE Alu -56 256 55 1343 77 0 11 chr17 4699005 4699187 -84805366 + AluY SINE Alu 127 306 -5 783 167 13 0 chr17 4699190 4699340 -84805213 - L1M4 LINE L1 -1254 4892 4741 290 47 47 0 chr17 4699341 4699384 -84805169 + (TTTTC)n Simple_repeat Simple_repeat 4 48 0 2144 110 10 0 chr17 4699398 4699698 -84804855 - AluSg SINE Alu -7 303 1 1885 183 23 76 chr17 4699698 4699930 -84804623 - L1M4 LINE L1 -1657 4489 4246 1731 107 133 0 chr17 4699930 4700193 -84804360 - AluSg SINE Alu -2 298 1 1885 183 23 76 chr17 4700193 4700529 -84804024 - L1M4 LINE L1 -1900 4246 3951 1036 160 59 0 chr17 4700542 4700729 -84803824 - AluSg/x SINE Alu -1 309 112 525 148 0 12 chr17 4700832 4700913 -84803640 + AluSg/x SINE Alu 214 293 -17 2466 62 0 0 chr17 4700917 4701222 -84803331 + AluY SINE Alu 1 305 -6 445 276 41 8 chr17 4701466 4701589 -84802964 - MIR3 SINE MIR -17 191 65 262 226 21 75 chr17 4702175 4702268 -84802285 + GA-rich Low_complexity Low_complexity 3 90 0 2456 34 3 10 chr17 4703961 4704257 -84800296 + AluY SINE Alu 3 296 -15 1011 70 0 0 chr17 4705207 4705336 -84799217 + AluY SINE Alu 163 291 -20 1026 243 27 0 chr17 4707006 4707265 -84797288 - MER58B DNA MER1_type 0 341 76 334 154 31 0 chr17 4707265 4707330 -84797223 + AluJ/FLAM SINE Alu 1 67 -235 866 169 0 7 chr17 4707430 4707566 -84796987 - AluJo SINE Alu -129 183 49 897 161 0 0 chr17 4707570 4707713 -84796840 + AluJb SINE Alu 164 306 -6 4818 96 0 85 chr17 4707741 4708049 -84796504 + LTR8 LTR ERV1 1 334 -357 2305 85 7 0 chr17 4708049 4708356 -84796197 + AluSx SINE Alu 3 311 -1 4818 96 0 85 chr17 4708356 4708801 -84795752 + LTR8 LTR ERV1 334 690 -1 1065 79 11 96 chr17 4709117 4709295 -84795258 - AluSx SINE Alu -10 300 138 2554 43 0 3 chr17 4711589 4711893 -84792660 + AluY SINE Alu 1 303 -8 943 61 0 0 chr17 4712121 4712236 -84792317 - AluSx SINE Alu -173 139 25 1510 107 0 30 chr17 4713075 4713308 -84791245 + AluSg/x SINE Alu 87 312 0 2081 126 0 3 chr17 4713997 4714306 -84790247 + AluSx SINE Alu 1 308 -4 427 76 0 51 chr17 4715242 4715312 -84789241 + Alu SINE Alu 233 305 -7 2495 43 0 10 chr17 4715312 4715616 -84788937 + AluY SINE Alu 1 301 -10 615 148 157 0 chr17 4715618 4715733 -84788820 + FLAM_C SINE Alu 1 133 0 2074 108 10 3 chr17 4715738 4716034 -84788519 + AluSp SINE Alu 1 298 -15 2178 98 0 7 chr17 4716041 4716336 -84788217 + AluSq SINE Alu 1 293 -20 208 303 13 13 chr17 4716485 4716561 -84787992 + L2 LINE L2 3016 3091 -181 2273 66 0 10 chr17 4716749 4717063 -84787490 + AluSx SINE Alu 1 311 0 1697 135 13 50 chr17 4717203 4717506 -84787047 + AluJo SINE Alu 1 292 -20 327 344 26 20 chr17 4717577 4717728 -84786825 + L2 LINE L2 3150 3301 -12 2295 86 0 3 chr17 4717787 4718088 -84786465 + AluSc SINE Alu 1 300 -9 182 296 155 0 chr17 4718088 4718159 -84786394 - MIR SINE MIR -116 146 65 1036 208 13 22 chr17 4718159 4718390 -84786163 + AluJo SINE Alu 71 299 -13 1865 125 4 4 chr17 4718397 4718678 -84785875 + AluY SINE Alu 5 285 -26 31 0 0 0 chr17 4718678 4718709 -84785844 + AT_rich Low_complexity Low_complexity 1 31 0 927 142 0 0 chr17 4718741 4718882 -84785671 - AluJb SINE Alu -4 308 168 2088 85 0 4 chr17 4719003 4719274 -84785279 - AluSg SINE Alu -40 270 1 2203 87 0 31 chr17 4719287 4719608 -84784945 - AluY SINE Alu 0 311 1 928 95 0 29 chr17 4719800 4719937 -84784616 - AluSq/x SINE Alu -180 133 1 210 214 31 133 chr17 4722812 4722862 -84781691 + L2 LINE L2 2971 3008 -264 2275 77 3 3 chr17 4722862 4723161 -84781392 - AluSp SINE Alu -14 299 1 210 214 31 133 chr17 4723161 4723208 -84781345 + L2 LINE L2 3008 3058 -214 540 170 0 0 chr17 4723226 4723320 -84781233 - AluJ/FRAM SINE Alu -3 309 216 435 293 60 20 chr17 4723377 4723527 -84781026 + L2 LINE L2 3117 3272 0 268 360 82 19 chr17 4723645 4723912 -84780641 - L3b LINE CR1 -196 1387 1104 2305 100 3 0 chr17 4725007 4725316 -84779237 + AluSx SINE Alu 1 310 -2 279 0 0 0 chr17 4726240 4726271 -84778282 + (A)n Simple_repeat Simple_repeat 1 31 0 2216 97 3 3 chr17 4726288 4726587 -84777966 + AluSc SINE Alu 2 300 -9 232 103 0 0 chr17 4727014 4727053 -84777500 + L1M2 LINE L1 5742 5780 -520 858 171 0 38 chr17 4727055 4727213 -84777340 + FRAM SINE Alu 1 152 -24 2316 102 0 6 chr17 4727224 4727538 -84777015 + AluSx SINE Alu 1 312 0 2021 181 8 31 chr17 4727554 4727809 -84776744 + L1PB4 LINE L1 5785 6030 -126 2138 95 27 0 chr17 4727809 4728103 -84776450 + AluSx SINE Alu 1 302 -10 2021 181 8 31 chr17 4728103 4728228 -84776325 + L1PB4 LINE L1 6030 6156 0 448 225 0 0 chr17 4728247 4728327 -84776226 + AluJ/FLAM SINE Alu 5 84 -228 337 308 0 54 chr17 4728462 4728647 -84775906 + C-rich Low_complexity Low_complexity 2 176 0 275 293 20 14 chr17 4728709 4728856 -84775697 + CT-rich Low_complexity Low_complexity 1 148 0 309 100 0 0 chr17 4729242 4729292 -84775261 + (CAG)n Simple_repeat Simple_repeat 3 52 0 297 75 0 0 chr17 4729822 4729862 -84774691 + (CA)n Simple_repeat Simple_repeat 2 41 0 321 309 118 22 chr17 4730592 4730728 -84773825 + MIR SINE MIR 40 188 -74 341 83 133 0 chr17 4731710 4731770 -84772783 - AluS SINE Alu -235 68 1 671 148 16 41 chr17 4731810 4731932 -84772621 + FLAM_C SINE Alu 11 129 -14 1977 128 27 3 chr17 4731963 4732259 -84772294 + AluSx SINE Alu 1 303 -9 1610 179 18 4 chr17 4732816 4733126 -84771427 - AluJb SINE Alu 0 314 1 2037 116 3 3 chr17 4733138 4733454 -84771099 - AluSx SINE Alu 0 316 1 1818 145 0 26 chr17 4733457 4733767 -84770786 - AluSx SINE Alu -10 302 1 241 216 39 0 chr17 4733782 4733833 -84770720 - MER66A LTR ERV1 -143 335 283 2551 203 71 50 chr17 4733867 4733909 -84770644 + L1MC4 LINE L1 7181 7221 -821 2129 81 7 42 chr17 4733909 4734217 -84770336 + AluSq SINE Alu 1 297 -16 2551 203 71 50 chr17 4734217 4735017 -84769536 + L1MC4 LINE L1 7221 8041 -1 1573 180 13 28 chr17 4735089 4735406 -84769147 - AluJb SINE Alu 0 312 1 321 341 40 8 chr17 4735846 4735972 -84768581 - MIR SINE MIR -59 149 20 2006 111 7 0 chr17 4740961 4741264 -84763289 + AluSx SINE Alu 1 305 0 379 298 118 0 chr17 4742132 4742293 -84762260 + MIR SINE MIR 57 236 -26 666 277 43 77 chr17 4742329 4742510 -84762043 + L2 LINE L2 3021 3190 -123 2070 108 0 29 chr17 4742510 4742816 -84761737 + AluSx SINE Alu 1 297 -15 666 277 43 77 chr17 4742816 4742934 -84761619 + L2 LINE L2 3190 3310 -3 2269 99 0 6 chr17 4744209 4744523 -84760030 + AluSx SINE Alu 1 312 0 681 224 105 53 chr17 4744651 4744879 -84759674 - MIR SINE MIR 0 262 23 2318 98 7 0 chr17 4745010 4745316 -84759237 - AluSx SINE Alu -4 308 1 1222 163 26 13 chr17 4745857 4746084 -84758469 - L1MB3 LINE L1 -1 6182 5953 2042 102 3 24 chr17 4746654 4746949 -84757604 - AluSx SINE Alu -15 297 9 827 204 7 0 chr17 4747697 4747849 -84756704 - FRAM SINE Alu -23 153 1 324 0 0 0 chr17 4748246 4748282 -84756271 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 819 152 65 0 chr17 4748282 4748420 -84756133 - AluSq SINE Alu -32 281 135 715 187 16 0 chr17 4748916 4749039 -84755514 + FLAM_C SINE Alu 1 125 -18 180 200 0 0 chr17 4749051 4749091 -84755462 + GA-rich Low_complexity Low_complexity 1 40 0 354 206 109 11 chr17 4749286 4749378 -84755175 + MIR SINE MIR 24 124 -138 2422 52 0 0 chr17 4749389 4749676 -84754877 - AluY SINE Alu -24 287 1 935 96 0 22 chr17 4749679 4749815 -84754738 - AluSq SINE Alu -180 133 1 418 198 62 0 chr17 4749816 4749912 -84754641 + MIR SINE MIR 113 214 -48 2010 64 8 0 chr17 4750444 4750694 -84753859 - AluSp SINE Alu -61 252 1 919 115 0 8 chr17 4750695 4750825 -84753728 - AluSq/x SINE Alu -183 129 1 1973 143 20 0 chr17 4750833 4751133 -84753420 - AluSx SINE Alu -6 306 1 421 93 0 53 chr17 4751133 4751208 -84753345 - MLT2C2 LTR ERVL -393 71 1 554 143 0 0 chr17 4751270 4751361 -84753192 + FLAM_C SINE Alu 51 141 -2 455 142 19 47 chr17 4751368 4751474 -84753079 + L1MDa LINE L1 1 103 -6437 1047 177 21 0 chr17 4751474 4751660 -84752893 + AluSg/x SINE Alu 120 309 -1 1399 173 24 45 chr17 4751680 4751993 -84752560 + MLT2D LTR ERVL 62 369 -45 183 100 0 0 chr17 4751993 4752023 -84752530 + (TG)n Simple_repeat Simple_repeat 2 31 0 1399 173 24 45 chr17 4752023 4752044 -84752509 + MLT2D LTR ERVL 369 389 -25 933 129 58 7 chr17 4752044 4752199 -84752354 - AluJb SINE Alu -36 276 114 1605 173 61 0 chr17 4752236 4752514 -84752039 - AluJb SINE Alu -17 295 1 536 343 29 0 chr17 4752592 4752767 -84751786 - L1M4 LINE L1 -3532 2614 2435 1396 224 94 34 chr17 4752772 4753243 -84751310 - MLT1D LTR MaLR -4 488 1 225 304 43 0 chr17 4753246 4753407 -84751146 - L1M4 LINE L1 -3708 2438 2271 2057 95 41 10 chr17 4753411 4753706 -84750847 - AluSq SINE Alu -7 306 3 26 50 0 0 chr17 4753974 4754014 -84750539 + GC_rich Low_complexity Low_complexity 1 40 0 2223 76 0 7 chr17 4758532 4758820 -84745733 - AluSc SINE Alu -23 286 1 969 159 0 69 chr17 4758836 4759025 -84745528 - FRAM SINE Alu 0 176 1 397 231 58 70 chr17 4759027 4759183 -84745370 - MER5A DNA MER1_type 0 189 36 1707 166 3 3 chr17 4759603 4759892 -84744661 - AluJb SINE Alu -23 289 1 2255 105 0 0 chr17 4759897 4760202 -84744351 - AluSx SINE Alu -7 305 1 337 313 43 0 chr17 4760208 4760371 -84744182 - L1ME4a LINE L1 -2 6119 5950 237 257 0 59 chr17 4761243 4761395 -84743158 + G-rich Low_complexity Low_complexity 5 147 0 483 323 127 26 chr17 4763140 4763168 -84741385 + L2 LINE L2 1685 1709 -1605 2226 71 17 14 chr17 4763168 4763463 -84741090 + AluSp SINE Alu 1 296 -17 483 323 127 26 chr17 4763463 4763861 -84740692 + L2 LINE L2 1709 2154 -1160 1058 106 0 0 chr17 4763864 4764005 -84740548 - AluSq/x SINE Alu -170 142 2 841 291 21 21 chr17 4764006 4764295 -84740258 + L2 LINE L2 2152 2440 -874 455 308 44 60 chr17 4764607 4764640 -84739913 + L2 LINE L2 2550 2582 -690 1650 99 0 4 chr17 4764640 4764873 -84739680 - AluSg/x SINE Alu 0 312 81 1564 157 7 18 chr17 4764875 4765149 -84739404 - AluJo SINE Alu -41 271 1 455 308 44 60 chr17 4765149 4765304 -84739249 + L2 LINE L2 2583 2739 -533 1956 127 3 7 chr17 4765304 4765604 -84738949 + AluSq SINE Alu 1 299 -14 455 308 44 60 chr17 4765604 4765871 -84738682 + L2 LINE L2 2739 3076 -196 1185 124 119 0 chr17 4766194 4766396 -84738157 - AluSc SINE Alu -13 296 71 1941 117 4 0 chr17 4766397 4766670 -84737883 - AluSp SINE Alu -39 274 1 411 209 0 0 chr17 4766846 4766913 -84737640 + AluJb SINE Alu 200 266 -46 2307 95 3 0 chr17 4766925 4767231 -84737322 - AluSx SINE Alu -5 307 1 2248 106 3 0 chr17 4767559 4767870 -84736683 - AluSx SINE Alu 0 312 1 188 143 24 0 chr17 4768026 4768068 -84736485 + CT-rich Low_complexity Low_complexity 5 47 0 670 91 0 0 chr17 4768510 4768598 -84735955 - AluS SINE Alu -225 88 1 839 183 0 0 chr17 4768621 4768763 -84735790 - FLAM_C SINE Alu -1 142 1 982 154 5 53 chr17 4768777 4768965 -84735588 - AluSg/x SINE Alu 0 312 134 2517 44 0 0 chr17 4768965 4769263 -84735290 - AluY SINE Alu -9 302 5 260 207 52 60 chr17 4769524 4769640 -84734913 - MLT1K LTR MaLR -286 302 188 2219 94 0 0 chr17 4769762 4770050 -84734503 + AluSx SINE Alu 14 301 -11 1943 141 13 3 chr17 4770619 4770918 -84733635 - AluSx SINE Alu -10 302 1 1627 171 3 27 chr17 4770940 4771103 -84733450 - AluJb SINE Alu -20 292 138 2293 86 3 7 chr17 4771103 4771115 -84733438 - AluSp SINE Alu -12 301 290 189 74 0 0 chr17 4771115 4771142 -84733411 + (TA)n Simple_repeat Simple_repeat 1 27 0 2293 86 3 7 chr17 4771142 4771431 -84733122 - AluSp SINE Alu -23 290 1 1627 171 3 27 chr17 4771431 4771566 -84732987 - AluJb SINE Alu -174 138 1 238 53 0 0 chr17 4771678 4771716 -84732837 + Alu SINE Alu 258 295 -8 1284 96 6 6 chr17 4771775 4771952 -84732601 - AluSq SINE Alu -136 177 1 2252 95 0 0 chr17 4773695 4773991 -84730562 - AluY SINE Alu -15 296 1 2202 91 0 7 chr17 4773991 4774287 -84730266 - AluSc SINE Alu -15 294 1 2191 104 0 3 chr17 4775269 4775568 -84728985 - AluSx SINE Alu -14 298 1 344 268 39 4 chr17 4776368 4776604 -84727949 + (TCCA)n Simple_repeat Simple_repeat 1 244 0 336 303 100 65 chr17 4777483 4777803 -84726750 + L1ME LINE L1 5255 5440 -722 2053 122 3 0 chr17 4777803 4778090 -84726463 - AluSx SINE Alu -24 288 1 336 303 100 65 chr17 4778090 4778247 -84726306 + L1ME LINE L1 5440 5590 -572 2102 128 0 0 chr17 4778358 4778642 -84725911 + AluSx SINE Alu 1 287 -25 195 69 0 0 chr17 4778642 4778671 -84725882 + (CAAAC)n Simple_repeat Simple_repeat 2 30 0 2102 128 0 0 chr17 4778671 4778683 -84725870 + AluSx SINE Alu 286 297 -15 675 256 0 55 chr17 4778876 4779075 -84725478 - L1ME2 LINE L1 -52 6112 5925 2183 120 0 0 chr17 4779075 4779384 -84725169 + AluSc SINE Alu 1 309 0 1199 111 0 0 chr17 4779384 4779546 -84725007 + AluSq SINE Alu 134 295 -18 1414 170 33 33 chr17 4779553 4779853 -84724700 + AluJb SINE Alu 1 300 -12 188 301 193 42 chr17 4779897 4780090 -84724463 + L2 LINE L2 3026 3255 -17 2115 62 87 3 chr17 4780090 4780379 -84724174 + AluSq SINE Alu 1 313 0 188 301 193 42 chr17 4780379 4780398 -84724155 + L2 LINE L2 3255 3270 -2 2255 99 0 0 chr17 4781002 4781305 -84723248 - AluSq SINE Alu -10 303 1 1731 157 48 0 chr17 4782674 4782968 -84721585 + AluJo SINE Alu 1 308 -4 23 0 0 0 chr17 4784106 4784129 -84720424 + GC_rich Low_complexity Low_complexity 1 23 0 36 77 0 0 chr17 4784515 4784593 -84719960 + GC_rich Low_complexity Low_complexity 1 78 0 21 57 0 0 chr17 4784623 4784658 -84719895 + GC_rich Low_complexity Low_complexity 1 35 0 25 75 0 0 chr17 4784840 4784893 -84719660 + GC_rich Low_complexity Low_complexity 1 53 0 373 308 117 0 chr17 4785058 4785178 -84719375 - L2 LINE L2 -1 3312 3179 1213 223 72 5 chr17 4785231 4785649 -84718904 - L1ME2 LINE L1 -393 5771 5326 1326 117 187 44 chr17 4785651 4785696 -84718857 - AluJb SINE Alu 0 312 275 2420 60 0 7 chr17 4785696 4785998 -84718555 - AluY SINE Alu -11 300 1 1326 117 187 44 chr17 4785998 4786225 -84718328 - AluJb SINE Alu -37 275 1 2153 70 35 3 chr17 4786234 4786519 -84718034 - AluSp SINE Alu -19 294 1 844 220 9 51 chr17 4786520 4786778 -84717775 + L1ME2 LINE L1 5926 6334 0 1948 104 56 3 chr17 4786784 4787072 -84717481 + AluSc SINE Alu 1 303 -6 2432 77 0 0 chr17 4787164 4787475 -84717078 + AluY SINE Alu 1 311 0 2001 135 0 0 chr17 4787646 4787942 -84716611 + AluSx SINE Alu 1 296 -16 2468 65 0 7 chr17 4787942 4788251 -84716302 + AluY SINE Alu 1 307 -4 434 250 11 107 chr17 4788293 4788449 -84716104 + MIR SINE MIR 34 162 -100 2149 102 3 7 chr17 4788449 4788744 -84715809 + AluSx SINE Alu 1 294 -18 434 250 11 107 chr17 4788744 4788821 -84715732 + MIR SINE MIR 162 245 -17 824 202 5 58 chr17 4789562 4789639 -84714914 - MER45A DNA AcHobo -1403 178 98 2231 82 10 0 chr17 4789639 4789932 -84714621 + AluY SINE Alu 1 296 -15 824 202 5 58 chr17 4789932 4790042 -84714511 - MER45A DNA AcHobo -1483 98 1 720 298 57 32 chr17 4790768 4791083 -84713470 - L2 LINE L2 -17 3296 2974 887 187 22 39 chr17 4791083 4791251 -84713302 + L1MC1 LINE L1 6155 6324 -9 2252 94 0 7 chr17 4791251 4791550 -84713003 + AluSx SINE Alu 1 297 -15 1963 103 4 0 chr17 4791550 4791813 -84712740 + AluSp SINE Alu 38 301 -12 887 187 22 39 chr17 4791813 4791825 -84712728 + L1MC1 LINE L1 6322 6333 0 1381 187 37 23 chr17 4791826 4791953 -84712600 + AluJo SINE Alu 1 125 -187 2104 138 0 0 chr17 4791953 4792265 -84712288 + AluSx SINE Alu 1 312 0 1381 187 37 23 chr17 4792265 4792437 -84712116 + AluJo SINE Alu 125 304 -8 2276 93 0 3 chr17 4794335 4794636 -84709917 - AluSx SINE Alu -12 300 1 1927 66 0 4 chr17 4795727 4795970 -84708583 + AluSg SINE Alu 32 273 -37 190 0 0 62 chr17 4795974 4796006 -84708547 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 1713 175 13 34 chr17 4796106 4796529 -84708024 - L1M4 LINE L1 -507 5667 5254 792 151 22 29 chr17 4796556 4796695 -84707858 - FRAM SINE Alu -38 138 1 2793 12 0 6 chr17 4796700 4797020 -84707533 - AluYb8 SINE Alu 0 318 1 1801 98 0 8 chr17 4797039 4797284 -84707269 - AluSx SINE Alu -69 243 1 500 193 40 13 chr17 4797285 4797435 -84707118 - L1M4 LINE L1 -838 5308 5155 860 49 0 0 chr17 4797536 4797638 -84706915 - AluS SINE Alu -210 102 1 1842 86 12 4 chr17 4798078 4798335 -84706218 + AluSq SINE Alu 47 305 -8 21 0 0 0 chr17 4798533 4798554 -84705999 + GC_rich Low_complexity Low_complexity 1 21 0 28 0 0 0 chr17 4798621 4798649 -84705904 + GC_rich Low_complexity Low_complexity 1 28 0 1617 149 76 4 chr17 4801266 4801541 -84703012 - AluJb SINE Alu -17 295 1 412 267 104 54 chr17 4801616 4801840 -84702713 - MIR3 SINE MIR -6 256 7 627 252 129 31 chr17 4802997 4803291 -84701262 - MER102b DNA MER1_type 0 341 19 240 226 0 0 chr17 4803580 4803642 -84700911 + CT-rich Low_complexity Low_complexity 2 63 0 290 229 9 48 chr17 4806259 4806364 -84698189 + MER113 DNA MER1_type? 4 104 -417 2383 77 0 0 chr17 4806371 4806668 -84697885 - AluSg SINE Alu -13 297 1 361 283 94 11 chr17 4806682 4806893 -84697660 - L1MC5 LINE L1 -12 7927 7545 2195 101 13 7 chr17 4806915 4807222 -84697331 - AluSx SINE Alu -3 309 1 2145 119 0 6 chr17 4808197 4808509 -84696044 - AluY SINE Alu -1 310 1 832 229 28 17 chr17 4808523 4808702 -84695851 + AluJb SINE Alu 131 311 -1 2253 107 10 0 chr17 4808723 4809032 -84695521 + AluSp SINE Alu 1 312 -1 299 128 0 0 chr17 4809474 4809521 -84695032 + AluSp/q SINE Alu 204 250 -53 1087 147 17 60 chr17 4809521 4809753 -84694800 + AluJo SINE Alu 85 306 -6 2301 74 0 0 chr17 4809768 4810051 -84694502 + AluSx SINE Alu 13 295 -17 441 339 23 6 chr17 4810071 4810242 -84694311 - MLT1K LTR MaLR -282 306 133 199 322 17 107 chr17 4810391 4810476 -84694077 - MIR SINE MIR -27 235 144 336 48 0 0 chr17 4810476 4810518 -84694035 + (TTTA)n Simple_repeat Simple_repeat 2 43 0 199 322 17 107 chr17 4810518 4810545 -84694008 - MIR SINE MIR -118 144 116 2127 113 0 0 chr17 4810545 4810852 -84693701 - AluSq SINE Alu 0 309 3 199 322 17 107 chr17 4810852 4810914 -84693639 - MIR SINE MIR -146 116 75 1948 152 3 25 chr17 4812003 4812188 -84692365 - AluJb SINE Alu -4 308 120 2265 100 3 0 chr17 4812188 4812499 -84692054 - AluSx SINE Alu 0 312 1 1948 152 3 25 chr17 4812499 4812529 -84692024 - AluJb SINE Alu -191 121 2 703 133 0 0 chr17 4812529 4812627 -84691926 - AluJ/FLAM SINE Alu -213 99 2 2167 94 30 17 chr17 4813233 4813531 -84691022 + AluSx SINE Alu 5 306 -6 339 318 28 0 chr17 4813626 4813733 -84690820 + L2 LINE L2 3197 3306 -7 619 148 0 19 chr17 4813755 4813863 -84690690 + FRAM SINE Alu 62 167 -9 2422 103 3 0 chr17 4813921 4814231 -84690322 + AluSp SINE Alu 1 311 -2 302 340 139 15 chr17 4814266 4814556 -84689997 - L2 LINE L2 -239 3074 2741 2416 64 0 20 chr17 4814558 4814854 -84689699 - AluY SINE Alu -16 295 6 1885 230 96 45 chr17 4814900 4815157 -84689396 - L1ME3A LINE L1 -5 6165 5923 2163 84 24 14 chr17 4815157 4815444 -84689109 - AluSx SINE Alu -22 290 1 1885 230 96 45 chr17 4815444 4815583 -84688970 - L1ME3A LINE L1 -247 5923 5793 2311 124 0 6 chr17 4815583 4815897 -84688656 - AluSx SINE Alu 0 312 1 1885 230 96 45 chr17 4815897 4816124 -84688429 - L1ME3A LINE L1 -377 5793 5509 311 331 11 67 chr17 4816137 4816213 -84688340 - L2 LINE L2 -613 2701 2622 2281 108 3 0 chr17 4816213 4816518 -84688035 + AluSg SINE Alu 1 306 -4 311 331 11 67 chr17 4816518 4816619 -84687934 - L2 LINE L2 -692 2622 2534 1731 171 3 45 chr17 4816752 4816898 -84687655 + AluJo SINE Alu 1 129 -183 2335 95 3 0 chr17 4816898 4817193 -84687360 + AluSp SINE Alu 1 296 -17 1731 171 3 45 chr17 4817193 4817356 -84687197 + AluJo SINE Alu 129 297 -15 1794 169 28 0 chr17 4817628 4817912 -84686641 + AluJb SINE Alu 1 292 -20 2484 80 0 3 chr17 4818071 4818370 -84686183 + AluSc SINE Alu 1 298 -11 1729 182 30 0 chr17 4818451 4818748 -84685805 + AluJo SINE Alu 1 306 -6 2364 103 3 0 chr17 4819349 4819650 -84684903 - AluSp SINE Alu -11 302 1 249 300 56 0 chr17 4819685 4819775 -84684778 - MIR SINE MIR -70 192 98 824 164 7 26 chr17 4820193 4820328 -84684225 + AluJo SINE Alu 1 134 -178 1437 150 49 95 chr17 4820328 4820654 -84683899 + AluSq SINE Alu 1 311 -2 824 164 7 26 chr17 4820654 4820670 -84683883 + AluJo SINE Alu 134 149 -163 2489 65 0 3 chr17 4820821 4821113 -84683440 - AluSc SINE Alu -18 291 1 438 293 5 34 chr17 4821115 4821323 -84683230 - L1MC5 LINE L1 -429 7532 7331 246 316 187 50 chr17 4821337 4821456 -84683097 + L2 LINE L2 2809 2910 -362 2393 105 0 0 chr17 4821456 4821761 -84682792 - AluSq SINE Alu -8 305 1 246 316 187 50 chr17 4821761 4822043 -84682510 + L2 LINE L2 2910 3265 -7 277 330 80 18 chr17 4822372 4822484 -84682069 - L2 LINE L2 -4 3309 3191 734 252 89 43 chr17 4822486 4822596 -84681957 + MER58B DNA MER1_type 1 104 -2316 2396 55 0 21 chr17 4822596 4822885 -84681668 + AluY SINE Alu 17 299 -12 734 252 89 43 chr17 4822885 4823099 -84681454 + MER58B DNA MER1_type 104 340 -1 560 222 73 43 chr17 4823113 4823347 -84681206 - MER112 DNA MER1_type -12 248 8 678 139 47 47 chr17 4823347 4823476 -84681077 + FLAM_C SINE Alu 1 129 -4 348 259 9 19 chr17 4823590 4823698 -84680855 - L2 LINE L2 -196 3076 2970 2437 100 0 0 chr17 4823701 4824002 -84680551 + AluSg1 SINE Alu 2 302 -7 1400 102 5 0 chr17 4824303 4824490 -84680063 - AluSp SINE Alu -5 308 121 350 54 0 54 chr17 4824498 4824572 -84679981 + (TTTTG)n Simple_repeat Simple_repeat 1 70 0 1310 70 0 41 chr17 4824573 4824744 -84679809 - AluY SINE Alu -147 164 1 706 159 0 23 chr17 4824747 4824879 -84679674 - AluJo/FLAM SINE Alu -173 129 1 722 246 28 9 chr17 4824879 4825094 -84679459 - L1M4 LINE L1 -3371 2775 2557 711 259 118 4 chr17 4825242 4825470 -84679083 - MIR SINE MIR -3 259 6 2281 125 0 0 chr17 4825566 4825878 -84678675 - AluSx SINE Alu 0 312 1 1844 165 3 3 chr17 4825890 4826175 -84678378 - AluJb SINE Alu -27 285 1 2412 92 0 10 chr17 4826365 4826668 -84677885 + AluSx SINE Alu 2 301 -11 347 285 57 83 chr17 4826685 4826913 -84677640 + MIR SINE MIR 39 260 -2 1383 292 58 64 chr17 4827043 4827462 -84677091 + L2 LINE L2 107 527 -2787 2387 69 41 72 chr17 4827462 4827881 -84676672 - L1MA2 LINE L1 0 6304 5899 2183 117 3 13 chr17 4827881 4828190 -84676363 - AluSx SINE Alu -1 311 6 1383 292 58 64 chr17 4828190 4828690 -84675863 + L2 LINE L2 525 1021 -2293 1363 114 0 0 chr17 4828721 4828897 -84675656 - AluSx SINE Alu -136 176 1 194 363 22 22 chr17 4828911 4829002 -84675551 + L2 LINE L2 3222 3312 -1 1376 113 11 0 chr17 4829075 4829260 -84675293 + AluSp SINE Alu 1 187 -126 1937 137 7 7 chr17 4829362 4829654 -84674899 - AluSx SINE Alu -20 292 1 2167 91 63 0 chr17 4829931 4830217 -84674336 - AluSx SINE Alu -7 305 2 384 288 109 42 chr17 4831177 4831304 -84673249 - L2 LINE L2 -58 3255 3138 1835 139 49 7 chr17 4831304 4831591 -84672962 - AluJb SINE Alu -13 299 1 384 288 109 42 chr17 4831591 4831776 -84672777 - L2 LINE L2 -175 3138 2922 2085 136 7 3 chr17 4831893 4832195 -84672358 - AluJb SINE Alu -9 303 1 2034 143 17 0 chr17 4832312 4832605 -84671948 + AluSx SINE Alu 7 304 -8 2307 45 7 41 chr17 4832783 4833110 -84671443 + AluY SINE Alu 1 317 0 180 77 0 0 chr17 4834144 4834170 -84670383 + (CAG)n Simple_repeat Simple_repeat 3 28 0 563 267 53 16 chr17 4834388 4834575 -84669978 - MIR SINE MIR -3 259 66 2269 78 0 19 chr17 4834875 4835182 -84669371 - AluSc SINE Alu -8 301 1 2115 86 52 0 chr17 4835362 4835663 -84668890 - AluSx SINE Alu 0 315 1 245 347 116 0 chr17 4835730 4835851 -84668702 - L2 LINE L2 -1 3271 3137 224 247 340 0 chr17 4835859 4835956 -84668597 + L2 LINE L2 3141 3270 -2 1140 93 0 0 chr17 4836107 4836246 -84668307 + AluSg SINE Alu 1 139 -171 365 75 0 0 chr17 4836251 4836304 -84668249 + Alu SINE Alu 249 301 0 370 243 103 26 chr17 4836382 4836555 -84667998 - MIR SINE MIR -10 252 63 865 254 79 63 chr17 4838614 4838896 -84665657 + L2 LINE L2 2211 2504 -810 2477 93 0 0 chr17 4838896 4839208 -84665345 - AluSp SINE Alu -1 312 1 865 254 79 63 chr17 4839208 4839382 -84665171 + L2 LINE L2 2504 2674 -640 2344 107 0 13 chr17 4839423 4839740 -84664813 - AluSq SINE Alu 0 313 1 334 219 109 0 chr17 4839749 4839877 -84664676 - L1M4 LINE L1 -2191 3955 3814 1428 97 11 0 chr17 4839877 4840063 -84664490 - AluSg/x SINE Alu -13 297 110 651 269 46 102 chr17 4840215 4840625 -84663928 - MLT1K LTR MaLR -26 562 176 1319 48 6 0 chr17 4840625 4840791 -84663762 - THE1C LTR MaLR 0 375 209 1178 67 0 0 chr17 4841091 4841226 -84663327 + AluSq/x SINE Alu 1 135 -178 2226 107 7 13 chr17 4841226 4841534 -84663019 + AluSx SINE Alu 1 306 -6 2015 127 8 33 chr17 4841754 4841879 -84662674 - L1PA16 LINE L1 -9 6157 6030 2474 95 0 0 chr17 4841879 4842184 -84662369 - AluSx SINE Alu -7 305 1 2015 127 8 33 chr17 4842184 4842419 -84662134 - L1PA16 LINE L1 -136 6030 5806 421 270 75 70 chr17 4842456 4842622 -84661931 + MLT1J LTR MaLR 234 398 -113 189 0 0 0 chr17 4842622 4842643 -84661910 + (TTTA)n Simple_repeat Simple_repeat 2 22 0 2231 92 0 7 chr17 4842645 4842929 -84661624 - AluSx SINE Alu -29 283 2 421 270 75 70 chr17 4842929 4843000 -84661553 + MLT1J LTR MaLR 398 475 -36 2284 105 23 3 chr17 4843173 4843479 -84661074 - AluSx SINE Alu 0 312 1 723 237 121 22 chr17 4843497 4843508 -84661045 + HsTC2 DNA Tc2 2 11 -1887 1671 117 121 23 chr17 4843508 4843772 -84660781 - AluSg SINE Alu -20 290 1 723 237 121 22 chr17 4843772 4843984 -84660569 + HsTC2 DNA Tc2 11 247 -1651 1492 214 21 8 chr17 4843990 4844369 -84660184 + L1M4 LINE L1 4375 4758 -1388 962 168 114 111 chr17 4844370 4844689 -84659864 + AluJo SINE Alu 1 320 0 2275 97 13 13 chr17 4844698 4845007 -84659546 + AluSp SINE Alu 2 310 -3 1939 138 22 28 chr17 4845012 4845374 -84659179 + L1MC1 LINE L1 5918 6277 -56 1029 113 0 0 chr17 4845374 4845507 -84659046 + AluSq/x SINE Alu 1 133 -179 222 118 0 0 chr17 4845507 4845541 -84659012 + (A)n Simple_repeat Simple_repeat 1 34 0 452 73 0 15 chr17 4845541 4845609 -84658944 + L1MC1 LINE L1 6261 6327 -6 2100 118 0 10 chr17 4845610 4845938 -84658615 + AluSx SINE Alu 1 312 0 571 209 201 14 chr17 4846067 4846352 -84658201 + HsTC2 DNA Tc2 1296 1811 -87 2113 131 0 0 chr17 4846352 4846662 -84657891 + AluSx SINE Alu 1 310 0 230 306 113 48 chr17 4846709 4846938 -84657615 - L2 LINE L2 -23 3290 3047 493 100 0 0 chr17 4847059 4847129 -84657424 + AluS SINE Alu 2 71 -242 273 57 0 0 chr17 4847623 4847658 -84656895 + (A)n Simple_repeat Simple_repeat 1 35 0 313 250 31 102 chr17 4847811 4847939 -84656614 - L2 LINE L2 -6 3307 3189 2031 102 11 0 chr17 4848076 4848341 -84656212 + AluSq SINE Alu 1 268 -45 351 281 10 97 chr17 4848530 4848726 -84655827 - MIR SINE MIR -59 203 25 1715 148 129 44 chr17 4848840 4849106 -84655447 + MER39 LTR ERV1 1 243 -464 2338 88 14 0 chr17 4849106 4849400 -84655153 - AluSp SINE Alu -15 298 1 1715 148 129 44 chr17 4849400 4849620 -84654933 + MER39 LTR ERV1 243 707 0 236 200 0 0 chr17 4850390 4850435 -84654118 - L2 LINE L2 -2 3311 3267 637 188 39 0 chr17 4850694 4850822 -84653731 - FLAM_C SINE Alu 0 133 1 2181 90 11 4 chr17 4850957 4851264 -84653289 - AluSg SINE Alu 0 309 1 186 191 0 0 chr17 4851587 4851629 -84652924 + (TTA)n Simple_repeat Simple_repeat 1 42 0 347 273 167 0 chr17 4852221 4852353 -84652200 + MIR SINE MIR 47 200 -62 1600 120 4 21 chr17 4852579 4852758 -84651795 - AluSq SINE Alu -1 312 137 2378 79 10 0 chr17 4852758 4853050 -84651503 - AluSx SINE Alu -17 295 1 1600 120 4 21 chr17 4853050 4853112 -84651441 - AluSq SINE Alu -176 137 75 2015 101 18 0 chr17 4854005 4854281 -84650272 - AluSx SINE Alu -17 295 15 266 319 121 28 chr17 4854334 4854582 -84649971 - L2 LINE L2 -354 2960 2690 1252 171 20 33 chr17 4854703 4854948 -84649605 - AluJo SINE Alu -70 242 1 798 328 85 32 chr17 4854970 4855467 -84649086 - L2 LINE L2 -1081 2233 1689 2185 108 0 20 chr17 4855467 4855772 -84648781 + AluSg SINE Alu 11 309 -1 798 328 85 32 chr17 4855772 4855954 -84648599 - L2 LINE L2 -1625 1689 1518 241 130 0 0 chr17 4856018 4856064 -84648489 + MADE1 DNA Mariner 1 46 -34 197 291 182 7 chr17 4856073 4856221 -84648332 - L2 LINE L2 -1897 1417 1244 330 146 0 0 chr17 4856534 4856582 -84647971 + AluSg/x SINE Alu 218 265 -37 548 212 78 60 chr17 4856682 4856899 -84647654 + L1MC4 LINE L1 5639 5859 -1949 979 248 125 21 chr17 4856899 4857400 -84647153 + L2 LINE L2 2509 3072 -241 288 0 0 0 chr17 4857400 4857432 -84647121 + (CA)n Simple_repeat Simple_repeat 1 32 0 1984 112 36 7 chr17 4857523 4857800 -84646753 + AluSg SINE Alu 1 285 -25 379 260 77 65 chr17 4857863 4858032 -84646521 + L2 LINE L2 3103 3273 -40 273 267 61 53 chr17 4858037 4858168 -84646385 + L1MD2 LINE L1 6198 6329 -30 366 333 0 0 chr17 4858176 4858266 -84646287 + L1MC4 LINE L1 6614 6703 -1339 339 298 48 0 chr17 4858224 4858308 -84646245 - L1MC4 LINE L1 -1339 6703 6616 * 1117 215 5 10 chr17 4858411 4858616 -84645937 - AluJo SINE Alu -108 204 1 1360 263 198 35 chr17 4858643 4858985 -84645568 + HAL1 LINE L1 126 411 -2096 1959 71 108 8 chr17 4858985 4859253 -84645300 + AluSx SINE Alu 1 295 -17 1360 263 198 35 chr17 4859253 4859275 -84645278 + HAL1 LINE L1 411 428 -2079 1554 170 99 7 chr17 4859275 4859558 -84644995 + AluJb SINE Alu 1 309 -3 1360 263 198 35 chr17 4859558 4859792 -84644761 + HAL1 LINE L1 428 823 -1684 1138 168 0 0 chr17 4859792 4859965 -84644588 - FRAM SINE Alu -6 170 1 287 247 35 0 chr17 4859968 4860053 -84644500 + HAL1 LINE L1 817 904 -1603 572 138 0 0 chr17 4860131 4860218 -84644335 + AluS SINE Alu 2 88 -225 2355 116 0 0 chr17 4860533 4860844 -84643709 + AluSx SINE Alu 1 311 -1 308 192 39 0 chr17 4860844 4860922 -84643631 + HAL1 LINE L1 2304 2384 -123 1035 150 63 77 chr17 4860931 4860980 -84643573 + AluJb SINE Alu 87 135 -177 2335 109 0 6 chr17 4860980 4861293 -84643260 + AluSx SINE Alu 1 311 -1 1035 150 63 77 chr17 4861293 4861450 -84643103 + AluJb SINE Alu 135 290 -22 396 203 144 25 chr17 4861455 4861573 -84642980 + HAL1 LINE L1 2376 2507 0 2240 119 7 0 chr17 4861601 4861927 -84642626 + AluSq SINE Alu 1 313 0 2429 99 0 0 chr17 4862321 4862623 -84641930 + AluSq SINE Alu 1 302 -11 2194 102 0 7 chr17 4862790 4863084 -84641469 + AluSx SINE Alu 1 292 -20 309 141 0 0 chr17 4863260 4863282 -84641271 + (A)n Simple_repeat Simple_repeat 1 22 -42 2412 72 10 0 chr17 4863282 4863574 -84640979 - AluSp SINE Alu -20 293 1 309 141 0 0 chr17 4863574 4863586 -84640967 + (A)n Simple_repeat Simple_repeat 22 33 -31 217 0 0 0 chr17 4863592 4863616 -84640937 + (TTG)n Simple_repeat Simple_repeat 1 180 0 2121 98 40 0 chr17 4863616 4863887 -84640666 - AluSq SINE Alu -9 304 1 309 141 0 0 chr17 4863887 4863902 -84640651 + (A)n Simple_repeat Simple_repeat 33 47 -17 2412 49 7 3 chr17 4863902 4864206 -84640347 - AluY SINE Alu -6 305 1 309 141 0 0 chr17 4864206 4864218 -84640335 + (A)n Simple_repeat Simple_repeat 46 64 0 2425 62 7 0 chr17 4864226 4864532 -84640021 - AluY SINE Alu -3 308 1 29 0 0 0 chr17 4864602 4864631 -84639922 + AT_rich Low_complexity Low_complexity 1 29 0 1399 160 4 4 chr17 4864713 4864951 -84639602 - AluJb SINE Alu 0 312 75 22 0 0 0 chr17 4865115 4865137 -84639416 + AT_rich Low_complexity Low_complexity 1 22 0 267 295 67 9 chr17 4865308 4865413 -84639140 - L3 LINE CR1 -1310 267 157 283 316 62 37 chr17 4865510 4865754 -84638799 + L1MC4 LINE L1 7689 7938 -104 188 206 0 0 chr17 4865939 4865973 -84638580 + L2 LINE L2 3016 3049 -264 2067 120 10 0 chr17 4866192 4866492 -84638061 + AluSg SINE Alu 1 303 -7 593 154 0 77 chr17 4867872 4868067 -84636486 + CT-rich Low_complexity Low_complexity 1 180 0 278 254 213 25 chr17 4869510 4869632 -84634921 + MIR SINE MIR 62 206 -56 22 0 0 0 chr17 4869632 4869654 -84634899 + AT_rich Low_complexity Low_complexity 1 22 0 1149 209 60 38 chr17 4873080 4873396 -84631157 + Charlie4a DNA MER1_type 1 323 -185 1659 139 63 21 chr17 4873396 4873683 -84630870 + AluJb SINE Alu 1 299 -13 2251 95 0 3 chr17 4873683 4873979 -84630574 + AluSg SINE Alu 1 295 -15 838 171 29 0 chr17 4874223 4874363 -84630190 + FRAM SINE Alu 9 152 -24 1390 156 5 9 chr17 4874919 4875143 -84629410 - AluSg/x SINE Alu -18 292 70 279 324 54 0 chr17 4875808 4875919 -84628634 - MER117 DNA MER1_type -55 142 26 356 346 64 16 chr17 4875920 4876108 -84628445 + MIR SINE MIR 60 256 -6 2038 127 3 3 chr17 4876165 4876464 -84628089 - AluSx SINE Alu -13 299 1 1719 107 19 91 chr17 4877086 4877405 -84627148 + AluSx SINE Alu 1 296 -16 2205 110 0 0 chr17 4877406 4877707 -84626846 + AluSc SINE Alu 1 301 -8 21 0 0 0 chr17 4877729 4877750 -84626803 + AT_rich Low_complexity Low_complexity 1 21 0 1854 151 14 0 chr17 4877768 4878059 -84626494 + AluJb SINE Alu 1 295 -17 2514 50 3 0 chr17 4879103 4879405 -84625148 - AluY SINE Alu -8 303 1 1959 153 3 0 chr17 4879408 4879716 -84624837 - AluSx SINE Alu -3 309 1 445 101 0 2 chr17 4879911 4880169 -84624384 + AluY SINE Alu 2 304 -7 366 181 64 0 chr17 4880185 4880278 -84624275 + MER58 DNA MER1_type 1 109 -232 386 292 106 0 chr17 4880356 4880469 -84624084 + L2 LINE L2 3148 3272 0 5920 201 21 15 chr17 4880495 4880700 -84623853 + L1MB8 LINE L1 3974 4176 -1970 2008 143 0 3 chr17 4880700 4881014 -84623539 + AluSq SINE Alu 1 313 0 5920 201 21 15 chr17 4881014 4882214 -84622339 + L1MB8 LINE L1 4176 5388 -758 2977 145 12 79 chr17 4882219 4882393 -84622160 + L1PB3 LINE L1 5611 5795 -359 2045 97 4 4 chr17 4882393 4882671 -84621882 + AluSg SINE Alu 1 278 -32 2977 145 12 79 chr17 4882671 4883077 -84621476 + L1PB3 LINE L1 5795 6152 -2 2058 127 0 0 chr17 4883087 4883378 -84621175 + AluSx SINE Alu 1 291 -21 2519 50 0 0 chr17 4884833 4885132 -84619421 + AluY SINE Alu 1 299 -12 392 247 17 98 chr17 4885178 4885375 -84619178 - L2 LINE L2 -107 3206 3029 2286 88 0 0 chr17 4885375 4885671 -84618882 + AluSq SINE Alu 1 296 -17 392 247 17 98 chr17 4885671 4885708 -84618845 - L2 LINE L2 -284 3029 2991 1310 170 87 7 chr17 4885712 4885971 -84618582 + L1MB8 LINE L1 5518 5804 -380 3050 163 20 38 chr17 4885971 4886531 -84618022 - MER44D DNA MER2_type 0 605 1 1310 170 87 7 chr17 4886531 4886559 -84617994 + L1MB8 LINE L1 5804 5828 -356 553 206 76 30 chr17 4886563 4886694 -84617859 + FLAM_A SINE Alu 1 137 -5 1243 182 16 55 chr17 4886710 4887017 -84617536 + L1MB8 LINE L1 5845 6139 -39 1908 117 0 28 chr17 4887017 4887337 -84617216 + AluSx SINE Alu 1 312 0 1778 86 0 163 chr17 4887338 4887688 -84616865 + AluSg SINE Alu 1 293 -17 2174 96 0 3 chr17 4887688 4887989 -84616564 + AluSg SINE Alu 1 300 -10 405 125 0 0 chr17 4888095 4888151 -84616402 - AluS SINE Alu -246 63 8 2531 292 65 43 chr17 4888205 4888240 -84616313 - L2 LINE L2 -342 2972 2939 1503 181 10 16 chr17 4888240 4888544 -84616009 + AluJo SINE Alu 1 302 -10 2531 292 65 43 chr17 4888544 4889423 -84615130 - L2 LINE L2 -375 2939 2029 1652 186 6 6 chr17 4889423 4889734 -84614819 + AluJo SINE Alu 1 311 -1 2531 292 65 43 chr17 4889734 4889886 -84614667 - L2 LINE L2 -1285 2029 1882 1598 196 113 100 chr17 4889961 4890204 -84614349 + L1MC4 LINE L1 7177 7415 -627 765 124 7 103 chr17 4890204 4890349 -84614204 - FLAM_C SINE Alu 0 133 3 1598 196 113 100 chr17 4890349 4890551 -84614002 + L1MC4 LINE L1 7415 7613 -429 1790 126 35 29 chr17 4890551 4890861 -84613692 + AluSx SINE Alu 1 312 0 1598 196 113 100 chr17 4890861 4890919 -84613634 + L1MC4 LINE L1 7613 7669 -373 198 0 0 0 chr17 4890919 4890941 -84613612 + (TTG)n Simple_repeat Simple_repeat 2 23 0 1598 196 113 100 chr17 4890941 4891063 -84613490 + L1MC4 LINE L1 7669 7812 -230 695 81 11 0 chr17 4891163 4891250 -84613303 + AluSq SINE Alu 101 188 -125 1663 149 25 38 chr17 4891343 4891658 -84612895 + AluJb SINE Alu 1 311 -1 207 0 0 0 chr17 4891693 4891716 -84612837 + (A)n Simple_repeat Simple_repeat 1 23 0 466 299 13 32 chr17 4892105 4892259 -84612294 - L2 LINE L2 -567 2747 2597 326 278 87 24 chr17 4892389 4892515 -84612038 + L2 LINE L2 3175 3308 -5 1835 169 0 0 chr17 4892837 4893133 -84611420 + AluJb SINE Alu 1 296 -16 293 330 60 32 chr17 4893603 4893788 -84610765 - L2 LINE L2 -713 2601 2412 * 322 310 87 45 chr17 4893768 4894092 -84610461 + L2 LINE L2 2746 3077 -195 305 221 13 39 chr17 4894137 4894214 -84610339 + L2 LINE L2 3195 3269 -3 2279 61 3 10 chr17 4895169 4895465 -84609088 - AluSx SINE Alu -18 294 1 2140 93 17 0 chr17 4896458 4896748 -84607805 - AluSx SINE Alu -17 295 1 834 370 58 40 chr17 4896751 4897563 -84606990 + L2 LINE L2 2474 3298 -15 793 196 14 0 chr17 4897564 4897707 -84606846 - AluJb SINE Alu -52 260 116 2246 86 3 3 chr17 4897708 4898011 -84606542 - AluY SINE Alu -8 303 1 1456 129 177 12 chr17 4898013 4898261 -84606292 - AluSg SINE Alu -11 289 1 355 190 76 0 chr17 4898539 4898618 -84605935 + AluSg/x SINE Alu 170 254 -48 6381 136 238 19 chr17 4898629 4899969 -84604584 - pTR5 LTR ERV1 -21 2417 785 530 124 19 38 chr17 4899969 4900074 -84604479 + FRAM SINE Alu 74 176 0 200 296 163 10 chr17 4900224 4900322 -84604231 + L2 LINE L2 3173 3285 -28 241 247 34 22 chr17 4900322 4900411 -84604142 + (TGGA)n Simple_repeat Simple_repeat 2 91 0 583 238 73 6 chr17 4903209 4903373 -84601180 + MIR SINE MIR 1 175 -87 542 101 0 0 chr17 4903373 4903479 -84601074 - AluSg/x SINE Alu 0 319 214 2204 85 0 24 chr17 4903481 4903619 -84600934 + AluSx SINE Alu 1 141 -161 1939 141 0 19 chr17 4903619 4903757 -84600796 + AluSx SINE Alu 1 140 -172 2298 69 3 0 chr17 4903757 4904047 -84600506 + AluY SINE Alu 1 291 -20 1939 141 0 19 chr17 4904047 4904220 -84600333 + AluSx SINE Alu 140 306 -6 2204 85 0 24 chr17 4904220 4904376 -84600177 + AluSx SINE Alu 141 288 -14 252 293 13 0 chr17 4904378 4904453 -84600100 + MIR SINE MIR 179 254 -8 357 62 0 0 chr17 4905877 4905925 -84598628 + (CA)n Simple_repeat Simple_repeat 2 49 0 309 100 0 0 chr17 4905961 4906011 -84598542 + (CA)n Simple_repeat Simple_repeat 2 51 0 186 191 0 0 chr17 4906041 4906083 -84598470 + (CA)n Simple_repeat Simple_repeat 2 43 0 363 23 0 0 chr17 4906101 4906145 -84598408 + (CA)n Simple_repeat Simple_repeat 2 45 0 208 150 25 0 chr17 4907045 4907085 -84597468 + (CTGGGG)n Simple_repeat Simple_repeat 6 46 0 2104 121 3 0 chr17 4907242 4907539 -84597014 - AluSx SINE Alu -13 299 2 1985 113 28 3 chr17 4909189 4909480 -84595073 - AluSq SINE Alu -15 298 1 262 302 239 16 chr17 4909884 4910202 -84594351 - L2 LINE L2 -46 3267 2879 200 261 134 0 chr17 4910346 4910465 -84594088 - L2 LINE L2 -457 2857 2723 181 195 73 0 chr17 4912086 4912127 -84592426 + L2 LINE L2 3226 3269 -3 210 37 0 0 chr17 4912755 4912782 -84591771 + (CAA)n Simple_repeat Simple_repeat 3 29 0 2261 90 0 0 chr17 4912797 4913098 -84591455 - AluSx SINE Alu -11 301 1 316 346 108 0 chr17 4913163 4913377 -84591176 - L2 LINE L2 -230 3083 2847 21 0 0 0 chr17 4913651 4913672 -84590881 + AT_rich Low_complexity Low_complexity 1 21 0 359 270 36 0 chr17 5114749 5114860 -84389693 + L1MC/D LINE L1 5486 5600 -744 2312 109 3 0 chr17 5115023 5115334 -84389219 + AluSq SINE Alu 1 312 -1 378 0 0 0 chr17 5115834 5115876 -84388677 + (CA)n Simple_repeat Simple_repeat 2 43 0 1822 129 29 0 chr17 5115902 5116180 -84388373 + AluJo SINE Alu 1 286 -26 246 192 27 41 chr17 5116358 5116431 -84388122 + C-rich Low_complexity Low_complexity 1 72 0 28 0 0 0 chr17 5116525 5116553 -84388000 + GC_rich Low_complexity Low_complexity 1 28 0 5683 52 8 0 chr17 5117125 5117783 -84386770 + LTR5 LTR ERVK 1 663 -306 2250 98 7 13 chr17 5117921 5118227 -84386326 - AluSx SINE Alu -8 304 1 501 278 124 0 chr17 5118301 5118470 -84386083 + MIR SINE MIR 71 260 -2 2155 110 0 0 chr17 5118501 5118782 -84385771 + AluSg SINE Alu 11 291 -19 2254 71 0 17 chr17 5118986 5119283 -84385270 + AluY SINE Alu 1 292 -19 184 343 27 0 chr17 5119747 5119820 -84384733 + L2 LINE L2 2884 2958 -356 2408 81 3 3 chr17 5119838 5120146 -84384407 - AluSp SINE Alu -5 308 1 2225 82 13 16 chr17 5120152 5120455 -84384098 - AluSq SINE Alu -11 302 1 1000 181 12 0 chr17 5121069 5121235 -84383318 + AluSg/x SINE Alu 138 305 -7 2038 121 3 36 chr17 5121388 5121721 -84382832 - AluSq SINE Alu 0 313 1 23 0 0 0 chr17 5121767 5121790 -84382763 + AT_rich Low_complexity Low_complexity 1 23 0 577 196 38 23 chr17 5121790 5121923 -84382630 - AluJb SINE Alu -176 136 2 300 47 23 0 chr17 5122394 5122437 -84382116 + L1P2 LINE L1 5758 5801 -354 339 171 11 34 chr17 5122535 5122623 -84381930 + L1MA9 LINE L1 6222 6307 -5 1119 290 96 47 chr17 5122943 5123028 -84381525 + L2 LINE L2 316 395 -2919 2058 158 0 3 chr17 5123028 5123332 -84381221 - AluJb SINE Alu -5 307 5 1119 290 96 47 chr17 5123332 5123904 -84380649 + L2 LINE L2 395 1005 -2309 911 126 0 0 chr17 5124008 5124127 -84380426 + AluSg/x SINE Alu 169 287 -23 2453 101 0 0 chr17 5124127 5124435 -84380118 + AluSx SINE Alu 1 308 -4 1904 116 0 56 chr17 5124624 5124908 -84379645 - AluSq SINE Alu -16 297 30 2087 127 20 0 chr17 5125044 5125336 -84379217 + AluSx SINE Alu 1 298 -14 216 209 0 0 chr17 5125658 5125701 -84378852 + A-rich Low_complexity Low_complexity 1 43 0 2160 90 45 3 chr17 5126413 5126701 -84377852 + AluSp SINE Alu 2 301 -12 229 357 66 50 chr17 5126983 5127302 -84377251 + L2 LINE L2 2864 3187 -85 2275 62 4 7 chr17 5127444 5127718 -84376835 + AluSp SINE Alu 32 304 -9 207 204 0 0 chr17 5128057 5128106 -84376447 + T-rich Low_complexity Low_complexity 3 51 0 4493 36 0 12 chr17 5128106 5128608 -84375945 - SVA Other Other 0 1386 891 2145 107 24 0 chr17 5128908 5129198 -84375355 - AluSx SINE Alu -15 297 1 250 208 56 14 chr17 5130072 5130144 -84374409 - MIR SINE MIR -75 187 113 293 51 0 0 chr17 5130624 5130663 -84373890 - Alu SINE Alu -245 58 20 1511 99 33 9 chr17 5130701 5130913 -84373640 + AluSg/x SINE Alu 89 305 -5 419 310 71 25 chr17 5131182 5131379 -84373174 - MIR SINE MIR 0 262 57 1995 125 13 3 chr17 5132477 5132781 -84371772 + AluSq SINE Alu 1 307 -6 291 204 146 39 chr17 5132781 5132884 -84371669 + MLT1A2 LTR MaLR 161 274 -100 2345 79 0 0 chr17 5134109 5134389 -84370164 - AluSq SINE Alu -16 297 18 2409 83 0 13 chr17 5134560 5134874 -84369679 - AluSg SINE Alu 0 310 1 2652 67 0 0 chr17 5134879 5135191 -84369362 - AluSx SINE Alu 0 312 1 213 204 23 11 chr17 5135741 5135829 -84368724 + CT-rich Low_complexity Low_complexity 1 89 0 1093 153 37 104 chr17 5136124 5136712 -84367841 - MER4C LTR ERV1 -15 450 1 1037 74 7 14 chr17 5137809 5137957 -84366596 - AluY SINE Alu -1 310 164 2195 114 7 13 chr17 5138256 5138562 -84365991 - AluSx SINE Alu -8 304 1 231 314 49 10 chr17 5138791 5138893 -84365660 - MIR3 SINE MIR -100 108 3 207 185 158 87 chr17 5139012 5139115 -84365438 + MIR SINE MIR 27 138 -70 1758 166 10 30 chr17 5139361 5139663 -84364890 + AluJo SINE Alu 1 296 -16 2347 76 3 7 chr17 5139666 5139957 -84364596 + AluSp SINE Alu 1 290 -23 210 175 0 25 chr17 5139982 5140022 -84364531 + GA-rich Low_complexity Low_complexity 3 41 0 230 83 83 21 chr17 5140450 5140498 -84364055 + LTR41 LTR ERVL 711 761 -12 2229 115 0 7 chr17 5141266 5141562 -84362991 - AluSx SINE Alu -18 294 1 3465 209 42 68 chr17 5141997 5142442 -84362111 - MLT-int LTR MaLR -753 982 570 2223 107 3 0 chr17 5142442 5142733 -84361820 + AluSq SINE Alu 1 292 -21 3465 209 42 68 chr17 5142733 5143175 -84361378 - MLT-int LTR MaLR -1165 570 118 2086 126 7 3 chr17 5143175 5143469 -84361084 - AluSx SINE Alu -17 295 1 2170 105 18 0 chr17 5143759 5144045 -84360508 + AluSc SINE Alu 2 292 -17 1380 105 0 0 chr17 5144415 5144587 -84359966 - AluSq SINE Alu -141 172 1 180 0 0 0 chr17 5145175 5145195 -84359358 + (G)n Simple_repeat Simple_repeat 1 20 0 1650 110 68 48 chr17 5145505 5145797 -84358756 + AluSp SINE Alu 2 299 -14 1525 164 42 18 chr17 5146302 5146426 -84358127 + AluJo SINE Alu 1 120 -182 2071 130 3 29 chr17 5146426 5146563 -84357990 + AluSx SINE Alu 1 140 -172 2307 92 0 4 chr17 5146563 5146888 -84357665 + AluSq SINE Alu 5 328 0 2071 130 3 29 chr17 5146888 5147080 -84357473 + AluSx SINE Alu 140 312 0 1525 164 42 18 chr17 5147080 5147241 -84357312 + AluJo SINE Alu 120 293 -9 2516 58 10 0 chr17 5147243 5147535 -84357018 + AluY SINE Alu 1 295 -16 1605 172 8 0 chr17 5147871 5148127 -84356426 + AluJo SINE Alu 10 267 -45 318 307 66 49 chr17 5152050 5152294 -84352259 + L1M2 LINE L1 1665 1912 -4937 545 272 78 56 chr17 5152394 5152606 -84351947 + L2 LINE L2 2913 3138 -175 1954 138 51 0 chr17 5152606 5152902 -84351651 - AluSx SINE Alu -1 311 1 545 272 78 56 chr17 5152902 5153046 -84351507 + L2 LINE L2 3138 3277 -36 2134 113 19 13 chr17 5153208 5153517 -84351036 + AluSx SINE Alu 1 311 -1 2374 70 3 3 chr17 5153790 5154098 -84350455 + AluSp SINE Alu 2 309 0 305 295 11 0 chr17 5154381 5154476 -84350077 - MIR3 SINE MIR -2 206 111 1679 167 7 7 chr17 5154524 5154627 -84349926 + AluJb SINE Alu 31 133 -179 2359 105 0 0 chr17 5154627 5154921 -84349632 + AluSq SINE Alu 1 294 -19 1679 167 7 7 chr17 5154921 5155099 -84349454 + AluJb SINE Alu 132 312 0 2275 96 7 0 chr17 5155644 5155935 -84348618 + AluSc SINE Alu 5 297 -12 556 98 0 12 chr17 5156072 5156154 -84348399 - AluJb SINE Alu -148 164 84 1774 132 38 0 chr17 5156201 5156466 -84348087 + AluSx SINE Alu 18 292 -20 26 50 0 0 chr17 5156467 5156507 -84348046 + AT_rich Low_complexity Low_complexity 1 40 0 2259 96 20 0 chr17 5156560 5156852 -84347701 + AluSp SINE Alu 1 298 -15 2288 96 3 7 chr17 5156854 5157156 -84347397 + AluY SINE Alu 1 301 -10 2312 94 10 3 chr17 5157717 5158026 -84346527 - AluY SINE Alu 0 311 1 2046 143 10 0 chr17 5158076 5158377 -84346176 - AluJo SINE Alu -8 304 1 740 251 157 61 chr17 5158510 5158969 -84345584 - LTR33 LTR ERVL -9 512 10 585 331 74 46 chr17 5159020 5159455 -84345098 + L2 LINE L2 2196 2642 -672 282 80 20 0 chr17 5159480 5159530 -84345023 - AluY SINE Alu -169 132 82 1526 109 14 0 chr17 5159530 5159741 -84344812 - AluY SINE Alu -94 217 4 997 272 71 57 chr17 5160112 5160608 -84343945 - MLT1J LTR MaLR -8 503 1 1702 182 0 14 chr17 5160667 5160953 -84343600 - AluJo SINE Alu -30 282 1 258 315 87 8 chr17 5161190 5161444 -84343109 + L1M4 LINE L1 4672 4945 -1201 2026 144 7 0 chr17 5161668 5161959 -84342594 - AluSx SINE Alu -14 298 6 811 117 23 8 chr17 5162240 5162368 -84342185 - AluJb SINE Alu -7 305 176 910 157 7 20 chr17 5164171 5164318 -84340235 - FRAM SINE Alu -14 162 18 742 205 0 0 chr17 5165226 5165343 -84339210 - FLAM_C SINE Alu -25 118 2 493 260 113 23 chr17 5165448 5165625 -84338928 + MIR3 SINE MIR 9 201 -7 536 218 171 64 chr17 5165686 5165781 -84338772 - MIR SINE MIR -2 260 177 479 167 49 0 chr17 5165781 5165883 -84338670 - L1MB8 LINE L1 0 6178 6072 536 218 171 64 chr17 5165883 5166021 -84338532 - MIR SINE MIR -85 177 2 987 218 119 48 chr17 5169251 5169628 -84334925 - MLT1C LTR MaLR -58 409 6 1618 218 139 37 chr17 5169674 5169887 -84334666 + L1ME3A LINE L1 4399 4589 -1557 347 0 23 0 chr17 5169887 5169930 -84334623 + (TG)n Simple_repeat Simple_repeat 1 44 0 1618 218 139 37 chr17 5169930 5170412 -84334141 + L1ME3A LINE L1 4589 5165 -981 2080 110 10 20 chr17 5170412 5170711 -84333842 + AluSg SINE Alu 1 296 -14 885 260 89 41 chr17 5170727 5171173 -84333380 + L1ME3A LINE L1 5407 5902 -268 1888 157 7 0 chr17 5171173 5171467 -84333086 + AluJb SINE Alu 6 301 -11 885 260 89 41 chr17 5171467 5171533 -84333020 + L1ME3A LINE L1 5902 5963 -207 2341 98 3 0 chr17 5171742 5172038 -84332515 - AluSp SINE Alu -16 297 1 2236 116 0 3 chr17 5172105 5172406 -84332147 - AluSg SINE Alu -10 300 1 1624 185 13 10 chr17 5173192 5173490 -84331063 - AluJo SINE Alu -13 299 1 33 43 0 0 chr17 5174183 5174230 -84330323 + AT_rich Low_complexity Low_complexity 1 47 0 2299 106 6 3 chr17 5174748 5175060 -84329493 - AluSp SINE Alu 0 313 1 2015 143 10 0 chr17 5175191 5175484 -84329069 - AluSx SINE Alu -16 296 1 35 74 0 11 chr17 5175486 5175530 -84329023 + AT_rich Low_complexity Low_complexity 1 44 -50 2344 107 0 0 chr17 5175530 5175840 -84328713 - AluSx SINE Alu -2 310 1 35 74 0 11 chr17 5175840 5175890 -84328663 + AT_rich Low_complexity Low_complexity 44 94 0 683 234 116 111 chr17 5176024 5176105 -84328448 - L2 LINE L2 -799 2515 2436 2145 98 14 0 chr17 5176105 5176380 -84328173 - AluSc SINE Alu -30 279 1 683 234 116 111 chr17 5176380 5176739 -84327814 - L2 LINE L2 -878 2436 2073 1905 127 7 14 chr17 5176739 5177031 -84327522 + AluSx SINE Alu 1 290 -22 2715 13 10 7 chr17 5177506 5177810 -84326743 + AluYa5 SINE Alu 1 305 -6 2209 103 4 0 chr17 5177912 5178236 -84326317 + AluSx SINE Alu 1 325 0 582 259 24 24 chr17 5178346 5178512 -84326041 + MER5A DNA MER1_type 24 189 0 2042 112 46 0 chr17 5178522 5178807 -84325746 - AluSp SINE Alu -15 298 1 281 254 111 40 chr17 5179136 5179262 -84325291 - Charlie2 DNA MER1_type -797 2065 1931 1365 191 8 12 chr17 5179270 5179527 -84325026 + AluJb SINE Alu 18 273 -39 593 61 91 0 chr17 5179686 5179785 -84324768 - AluSq/x SINE Alu -205 108 1 1440 146 11 52 chr17 5179945 5180072 -84324481 + AluJb SINE Alu 3 115 -197 2226 103 3 0 chr17 5180072 5180363 -84324190 + AluSc SINE Alu 2 293 -16 1440 146 11 52 chr17 5180363 5180503 -84324050 + AluJb SINE Alu 115 259 -53 486 143 112 0 chr17 5180503 5180601 -84323952 + FRAM SINE Alu 67 175 -1 2161 101 50 0 chr17 5181149 5181446 -84323107 + AluSq SINE Alu 1 312 -1 330 186 0 0 chr17 5181747 5181806 -84322747 + L1MB5 LINE L1 5902 5960 -214 2184 120 7 3 chr17 5181886 5182194 -84322359 + AluSp SINE Alu 3 311 -2 366 229 8 29 chr17 5182248 5182391 -84322162 + L1ME LINE L1 5314 5455 -701 1821 171 7 0 chr17 5182413 5182705 -84321848 + AluJb SINE Alu 1 294 -18 265 283 33 0 chr17 5182883 5182975 -84321578 - L1ME LINE L1 -459 5662 5568 2328 90 3 6 chr17 5183066 5183378 -84321175 + AluSq SINE Alu 3 313 0 1288 86 0 131 chr17 5183510 5183594 -84320959 - AluSx SINE Alu -119 193 100 2156 78 50 0 chr17 5183594 5183877 -84320676 - AluY SINE Alu -14 297 1 1288 86 0 131 chr17 5183877 5184014 -84320539 - AluSx SINE Alu -212 100 1 1993 145 0 0 chr17 5184183 5184472 -84320081 + AluJb SINE Alu 1 289 -23 2202 116 3 0 chr17 5184566 5184858 -84319695 + AluSg SINE Alu 2 294 -16 334 203 125 55 chr17 5184924 5185052 -84319501 + MLT1B LTR MaLR 2 138 -252 1451 181 4 0 chr17 5185052 5185290 -84319263 + AluJo SINE Alu 1 239 -73 549 189 0 27 chr17 5185292 5185403 -84319150 + AluJb SINE Alu 202 309 -3 427 215 16 0 chr17 5185403 5185524 -84319029 + GA-rich Low_complexity Low_complexity 1 123 0 218 171 0 0 chr17 5185539 5185574 -84318979 + CT-rich Low_complexity Low_complexity 1 35 0 804 192 13 0 chr17 5185625 5185781 -84318772 + MLT1B LTR MaLR 192 349 -41 247 162 0 0 chr17 5185824 5185861 -84318692 + MLT1B LTR MaLR 354 390 0 2079 93 6 42 chr17 5185920 5186231 -84318322 - AluSg SINE Alu -9 301 2 649 280 63 19 chr17 5186240 5186552 -84318001 + L1ME LINE L1 5479 5806 -360 1978 133 0 17 chr17 5186552 5186845 -84317708 + AluJb SINE Alu 11 298 -14 2356 72 10 3 chr17 5186845 5187138 -84317415 + AluSc SINE Alu 1 295 -14 386 171 0 14 chr17 5187139 5187209 -84317344 + MLT1C LTR MaLR 399 467 0 330 45 0 0 chr17 5187298 5187342 -84317211 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 2131 115 7 0 chr17 5187342 5187621 -84316932 - AluSq SINE Alu -32 281 1 315 310 147 16 chr17 5187624 5187753 -84316800 - MIR3 SINE MIR -61 147 2 553 189 8 45 chr17 5188045 5188177 -84316376 - FAM SINE Alu -5 44 1 2307 117 3 0 chr17 5188206 5188514 -84316039 - AluSx SINE Alu -3 309 1 26 50 0 0 chr17 5188715 5188755 -84315798 + AT_rich Low_complexity Low_complexity 1 40 0 629 185 174 34 chr17 5189405 5189458 -84315095 - MER3 DNA MER1_type -3 206 162 1657 191 10 16 chr17 5189458 5189772 -84314781 + AluJb SINE Alu 1 312 0 629 185 174 34 chr17 5189772 5189896 -84314657 - MER3 DNA MER1_type -47 162 4 229 203 90 8 chr17 5193286 5193419 -84311134 + (TA)n Simple_repeat Simple_repeat 1 144 0 * 239 222 30 30 chr17 5193329 5193428 -84311125 + (TATAA)n Simple_repeat Simple_repeat 5 103 0 1682 135 16 64 chr17 5193701 5193874 -84310679 - AluSx SINE Alu -15 297 144 6371 36 0 14 chr17 5193874 5194604 -84309949 - SVA Other Other -2 1384 665 1682 135 16 64 chr17 5194604 5194742 -84309811 - AluSx SINE Alu -168 144 1 1723 124 86 4 chr17 5196363 5196630 -84307923 - MER7A DNA MER2_type -4 342 56 444 153 0 28 chr17 5196630 5196702 -84307851 + AluJ/FRAM SINE Alu 220 289 -23 2650 58 0 0 chr17 5197486 5197796 -84306757 - AluY SINE Alu 0 311 2 2042 127 3 3 chr17 5199362 5199661 -84304892 - AluSc SINE Alu -10 299 1 2395 61 14 3 chr17 5199673 5199969 -84304584 - AluY SINE Alu -12 299 1 820 163 0 15 chr17 5200071 5200206 -84304347 - FLAM_C SINE Alu 0 133 1 625 178 29 106 chr17 5200267 5200392 -84304161 - LTR41 LTR ERVL -2 771 638 2066 116 0 33 chr17 5200392 5200693 -84303860 + AluSx SINE Alu 1 291 -21 1899 166 0 7 chr17 5200703 5200993 -84303560 + AluJb SINE Alu 1 288 -24 625 178 29 106 chr17 5200993 5201064 -84303489 - LTR41 LTR ERVL -144 629 580 623 237 124 27 chr17 5201129 5201315 -84303238 - MER63A DNA MER1_type 0 210 7 339 173 298 19 chr17 5201316 5201420 -84303133 + FLAM_A SINE Alu 1 133 0 213 264 138 50 chr17 5201470 5201629 -84302924 - L2 LINE L2 -471 2843 2671 399 310 44 0 chr17 5202166 5202279 -84302274 - MIR SINE MIR -121 141 24 27 0 0 0 chr17 5202452 5202479 -84302074 + AT_rich Low_complexity Low_complexity 1 27 0 2418 78 0 3 chr17 5202489 5202783 -84301770 + AluSq SINE Alu 5 297 -16 1866 164 13 0 chr17 5202953 5203252 -84301301 + AluJb SINE Alu 1 303 -9 1085 215 113 58 chr17 5203260 5203434 -84301119 + L1MEc LINE L1 39 202 -6194 1527 123 192 0 chr17 5203434 5203695 -84300858 - AluJb SINE Alu -1 311 1 1085 215 113 58 chr17 5203695 5203902 -84300651 + L1MEc LINE L1 202 441 -5955 498 165 52 0 chr17 5204594 5204691 -84299862 - Charlie1 DNA MER1_type -30 2731 2630 549 205 74 95 chr17 5204701 5204839 -84299714 - Charlie1 DNA MER1_type -2544 217 83 2081 130 0 22 chr17 5204839 5205155 -84299398 + AluJb SINE Alu 1 309 -3 549 205 74 95 chr17 5205155 5205206 -84299347 - Charlie1 DNA MER1_type -2678 83 32 345 271 146 35 chr17 5205247 5205391 -84299162 - MIR SINE MIR -24 238 79 1681 153 44 24 chr17 5206781 5207076 -84297477 + AluJb SINE Alu 1 301 -11 1367 152 0 0 chr17 5208975 5209213 -84295340 - AluJb SINE Alu 0 322 85 704 281 92 41 chr17 5209293 5209781 -84294772 - L1ME4a LINE L1 -1 6120 5608 2069 156 99 21 chr17 5210974 5211398 -84293155 + MSTB2 LTR MaLR 1 457 0 1054 146 0 0 chr17 5212283 5212454 -84292099 + AluSg/x SINE Alu 131 301 0 2097 119 14 0 chr17 5212585 5212871 -84291682 - AluSq SINE Alu -23 290 1 779 61 0 0 chr17 5213572 5213671 -84290882 - L1PA4 LINE L1 -2 6153 6055 2786 34 3 0 chr17 5213671 5213996 -84290557 + L1P2 LINE L1 5449 5774 -381 1565 170 48 15 chr17 5214848 5215118 -84289435 + AluJo SINE Alu 6 319 0 208 114 0 0 chr17 5215118 5215153 -84289400 + (TAA)n Simple_repeat Simple_repeat 2 180 0 2331 94 0 29 chr17 5215660 5215968 -84288585 + AluSx SINE Alu 1 299 -13 2314 110 0 3 chr17 5216026 5216335 -84288218 + AluSc SINE Alu 1 308 -1 2020 116 14 83 chr17 5218920 5219282 -84285271 + MER1B DNA MER1_type 1 337 0 2476 97 3 0 chr17 5219890 5220201 -84284352 + AluSp SINE Alu 1 312 -1 438 260 97 41 chr17 5220467 5220690 -84283863 + L1M4 LINE L1 2963 3211 -2935 2331 80 0 7 chr17 5220690 5220991 -84283562 + AluY SINE Alu 1 299 -12 438 260 97 41 chr17 5220991 5221086 -84283467 + L1M4 LINE L1 3211 3299 -2847 1003 88 0 0 chr17 5221205 5221330 -84283223 + AluSq/x SINE Alu 1 125 -187 2268 109 3 0 chr17 5221334 5221637 -84282916 + AluSg SINE Alu 1 304 -6 709 281 55 46 chr17 5221639 5222205 -84282348 + L1M4 LINE L1 3422 3992 -2154 242 247 21 10 chr17 5222511 5222608 -84281945 + L1M4 LINE L1 4272 4369 -1777 1751 133 10 45 chr17 5223652 5223960 -84280593 - AluSq SINE Alu -16 297 1 720 140 0 18 chr17 5224146 5224260 -84280293 + FLAM_C SINE Alu 6 117 -26 26 0 0 0 chr17 5224267 5224293 -84280260 + AT_rich Low_complexity Low_complexity 1 26 0 29 0 0 0 chr17 5228306 5228335 -84276218 + AT_rich Low_complexity Low_complexity 1 29 0 635 251 15 41 chr17 5228336 5228531 -84276022 - LTR41 LTR ERVL -583 190 1 2272 127 17 17 chr17 5228775 5229130 -84275423 - THE1A LTR MaLR 0 355 1 11729 91 10 8 chr17 5229130 5230707 -84273846 - THE1A-int LTR MaLR 0 1580 1 2485 112 6 8 chr17 5230707 5231063 -84273490 - THE1A LTR MaLR 0 355 1 1157 242 11 23 chr17 5231166 5231430 -84273123 + MIR SINE MIR 2 262 0 845 138 23 0 chr17 5231506 5231636 -84272917 - FLAM_C SINE Alu 0 133 1 2426 78 0 0 chr17 5232372 5232668 -84271885 - AluY SINE Alu -15 296 1 24 0 0 0 chr17 5232679 5232703 -84271850 + AT_rich Low_complexity Low_complexity 1 24 0 757 161 0 0 chr17 5232754 5232866 -84271687 - FLAM_C SINE Alu -30 113 2 1759 164 44 0 chr17 5232868 5233161 -84271392 - AluJb SINE Alu -6 306 1 1554 163 67 14 chr17 5233161 5233442 -84271111 - AluJo SINE Alu -15 297 1 2186 112 3 7 chr17 5233711 5234005 -84270548 + AluSx SINE Alu 1 293 -19 2030 195 101 43 chr17 5234324 5234857 -84269696 + LTR6A LTR ERV1 1 564 0 1790 88 0 0 chr17 5235850 5236077 -84268476 - AluSg/x SINE Alu -14 298 72 572 291 0 55 chr17 5236195 5236394 -84268159 + MIR SINE MIR 3 190 -72 2131 109 3 10 chr17 5236827 5237130 -84267423 + AluSx SINE Alu 1 301 -11 1825 73 0 0 chr17 5237249 5237483 -84267070 + L1PA6 LINE L1 5919 6152 -2 1932 129 3 45 chr17 5237519 5237829 -84266724 + AluSx SINE Alu 1 297 -15 1193 148 6 0 chr17 5237829 5238005 -84266548 + AluSg/x SINE Alu 132 308 -2 300 246 158 35 chr17 5238094 5238208 -84266345 + L2 LINE L2 3186 3313 0 27 49 0 0 chr17 5238416 5238457 -84266096 + AT_rich Low_complexity Low_complexity 1 41 0 1304 161 81 22 chr17 5238528 5238801 -84265752 - AluJo SINE Alu -11 301 13 252 0 0 0 chr17 5238830 5238858 -84265695 + (TTTTC)n Simple_repeat Simple_repeat 2 29 0 1492 193 4 22 chr17 5238877 5239152 -84265401 - AluJo SINE Alu -42 270 1 2320 86 0 0 chr17 5239159 5239469 -84265084 - AluSc SINE Alu 0 310 1 2960 176 98 41 chr17 5239490 5240176 -84264377 - MER21B LTR ERV1 -45 818 94 2167 125 3 6 chr17 5240182 5240493 -84264060 - AluSp SINE Alu -3 310 1 1964 148 0 0 chr17 5240494 5240792 -84263761 - AluSx SINE Alu -12 300 3 2378 99 0 13 chr17 5240869 5241183 -84263370 - AluSp SINE Alu -3 310 1 327 232 32 74 chr17 5241407 5241502 -84263051 - L2 LINE L2 -9 3263 3173 269 288 12 0 chr17 5241512 5241592 -84262961 - L1ME LINE L1 -357 5764 5684 1248 141 20 43 chr17 5241635 5241890 -84262663 + Charlie1b DNA MER1_type 59 307 -216 1119 203 11 23 chr17 5241890 5242156 -84262397 - AluJo SINE Alu -11 301 39 2308 107 3 3 chr17 5242336 5242645 -84261908 + AluSx SINE Alu 1 309 -3 426 282 141 33 chr17 5242674 5242887 -84261666 + MIR SINE MIR 21 256 -6 2139 105 3 3 chr17 5243053 5243348 -84261205 + AluSx SINE Alu 1 295 -17 2204 117 0 7 chr17 5243348 5243648 -84260905 + AluSg SINE Alu 1 298 -12 1406 150 0 0 chr17 5244421 5244628 -84259925 - AluSq SINE Alu -7 306 100 2247 81 0 7 chr17 5244630 5244915 -84259638 - AluY SINE Alu -28 283 1 2070 111 3 20 chr17 5245121 5245419 -84259134 - AluSx SINE Alu -19 293 1 253 314 49 10 chr17 5245650 5245752 -84258801 - MIR3 SINE MIR -100 108 3 231 182 158 87 chr17 5245871 5245974 -84258579 + MIR SINE MIR 27 138 -70 230 329 0 0 chr17 5246366 5246442 -84258111 - L1ME LINE L1 -331 5839 5764 1412 183 20 53 chr17 5246446 5246746 -84257807 - AluJo SINE Alu -22 290 1 248 208 0 0 chr17 5246750 5246798 -84257755 - L1ME LINE L1 -387 5783 5736 522 260 27 0 chr17 5246852 5246998 -84257555 - L1ME LINE L1 -428 5742 5593 2356 112 0 3 chr17 5247012 5247325 -84257228 - AluSx SINE Alu 0 312 1 2214 89 3 7 chr17 5247795 5248087 -84256466 - AluY SINE Alu -6 305 15 2377 95 0 0 chr17 5248091 5248387 -84256166 - AluY SINE Alu -15 296 1 938 204 71 82 chr17 5248397 5248775 -84255778 - MLT1A2 LTR MaLR 0 374 1 1974 143 0 17 chr17 5248802 5249102 -84255451 - AluSx SINE Alu -17 295 1 1607 161 75 7 chr17 5249131 5249411 -84255142 + AluJb SINE Alu 1 299 -13 484 278 73 122 chr17 5249570 5249955 -84254598 + L2 LINE L2 2948 3313 0 751 260 25 54 chr17 5249955 5250062 -84254491 - MIR SINE MIR 0 262 153 2437 72 0 10 chr17 5250062 5250368 -84254185 - AluY SINE Alu -8 303 1 751 260 25 54 chr17 5250368 5250502 -84254051 - MIR SINE MIR -109 153 28 2218 111 34 0 chr17 5250643 5250941 -84253612 - AluSx SINE Alu 0 312 5 1876 153 0 10 chr17 5251188 5251476 -84253077 - AluJb SINE Alu -13 299 15 205 229 183 46 chr17 5251540 5251671 -84252882 + MIR3 SINE MIR 11 159 -49 2037 74 4 0 chr17 5253340 5253612 -84250941 + AluSp SINE Alu 39 311 0 622 300 155 51 chr17 5253822 5254017 -84250536 + L2 LINE L2 2006 2179 -1093 2084 118 0 30 chr17 5254017 5254322 -84250231 - AluSx SINE Alu -16 296 1 622 300 155 51 chr17 5254322 5254930 -84249623 + L2 LINE L2 2179 2722 -550 2385 107 0 0 chr17 5254930 5255239 -84249314 + AluSg SINE Alu 1 309 -1 622 300 155 51 chr17 5255239 5255552 -84249001 + L2 LINE L2 2722 3266 -6 332 293 136 21 chr17 5255651 5255791 -84248762 + L2 LINE L2 3151 3306 -7 2251 102 13 3 chr17 5256047 5256350 -84248203 + AluSq SINE Alu 1 306 -7 2154 132 7 0 chr17 5256486 5256782 -84247771 + AluSx SINE Alu 1 298 -14 483 239 90 0 chr17 5256921 5257055 -84247498 - MLT1L LTR MaLR 0 615 470 402 209 181 60 chr17 5257082 5257186 -84247367 - MLT1L LTR MaLR -211 404 314 2237 92 46 0 chr17 5257186 5257470 -84247083 - AluSc SINE Alu -12 297 1 402 209 181 60 chr17 5257470 5257547 -84247006 - MLT1L LTR MaLR -301 314 201 1954 167 39 28 chr17 5257549 5257756 -84246797 - MLT1A1 LTR MaLR -1 364 150 1914 156 0 56 chr17 5257756 5257925 -84246628 - AluJo SINE Alu -9 303 159 2397 92 0 10 chr17 5257925 5258229 -84246324 - AluY SINE Alu -10 301 1 1914 156 0 56 chr17 5258229 5258380 -84246173 - AluJo SINE Alu -153 159 1 1954 167 39 28 chr17 5258380 5258532 -84246021 - MLT1A1 LTR MaLR -215 150 1 6242 198 66 46 chr17 5258532 5259697 -84244856 - MLT1A1-int LTR MaLR 0 1735 534 2172 126 3 3 chr17 5259697 5260007 -84244546 + AluSq SINE Alu 1 310 -3 6242 198 66 46 chr17 5260007 5260309 -84244244 - MLT1A1-int LTR MaLR -1201 534 239 1294 296 40 30 chr17 5265148 5265820 -84238733 - L1MC3 LINE L1 -1621 6164 5486 257 178 10 139 chr17 5271114 5271215 -84233338 + SN5 Other centromeric 300 387 -68 2003 161 24 3 chr17 5272215 5272551 -84232002 - MER2 DNA MER2_type 0 344 2 183 80 0 0 chr17 5272631 5272656 -84231897 + (TCCA)n Simple_repeat Simple_repeat 4 28 0 216 182 23 0 chr17 5273140 5273184 -84231369 + C-rich Low_complexity Low_complexity 4 48 0 213 204 23 11 chr17 5273495 5273583 -84230970 + GA-rich Low_complexity Low_complexity 1 89 0 2265 92 3 3 chr17 5274136 5274442 -84230111 + AluSp SINE Alu 1 306 -7 585 64 0 0 chr17 5274488 5274566 -84229987 + (TG)n Simple_repeat Simple_repeat 2 79 0 3105 136 4 10 chr17 5274765 5275251 -84229302 - MER1A DNA MER1_type 0 529 47 766 161 14 156 chr17 5275446 5275657 -84228896 - MLT1C LTR MaLR 0 467 210 238 108 37 0 chr17 5275657 5275708 -84228845 + MLT-int LTR MaLR 142 216 -1155 270 160 0 0 chr17 5276281 5276331 -84228222 + (CGTG)n Simple_repeat Simple_repeat 3 52 0 201 121 0 0 chr17 5276380 5276413 -84228140 + (TG)n Simple_repeat Simple_repeat 2 34 0 192 346 38 53 chr17 5278009 5278405 -84226148 + L2 LINE L2 2498 2887 -427 319 259 126 21 chr17 5279229 5279372 -84225181 + MIR3 SINE MIR 44 201 -7 216 0 0 0 chr17 5279705 5279729 -84224824 + (CAGA)n Simple_repeat Simple_repeat 3 26 0 311 319 104 7 chr17 5280346 5280481 -84224072 + MIR SINE MIR 81 228 -34 24 0 0 0 chr17 5280508 5280532 -84224021 + AT_rich Low_complexity Low_complexity 1 24 0 349 263 256 7 chr17 5281156 5281293 -84223260 + LTR28 LTR ERV1 8 178 -842 339 163 23 47 chr17 5281304 5281390 -84223163 + LTR1 LTR ERV1 107 190 -595 * 2377 223 65 39 chr17 5281359 5282054 -84222499 + LTR28 LTR ERV1 308 1020 0 1533 118 126 37 chr17 5282161 5282431 -84222122 - AluSg SINE Alu -14 296 3 501 265 107 20 chr17 5282467 5282663 -84221890 + L2 LINE L2 2587 2799 -515 241 261 76 89 chr17 5282684 5282715 -84221838 - L2 LINE L2 0 3313 3283 2280 81 0 0 chr17 5282715 5283012 -84221541 - AluSg SINE Alu -13 297 1 241 261 76 89 chr17 5283012 5283137 -84221416 - L2 LINE L2 -30 3283 3159 212 271 127 34 chr17 5283251 5283369 -84221184 + L2 LINE L2 2884 3012 -301 * 435 312 102 10 chr17 5283355 5283560 -84220993 - MIR SINE MIR -8 254 31 1952 118 3 0 chr17 5284698 5284986 -84219567 - AluSx SINE Alu -23 289 1 735 176 142 0 chr17 5285211 5285387 -84219166 - MLT1A2 LTR MaLR 0 374 174 2019 117 3 7 chr17 5285404 5285713 -84218840 - AluSx SINE Alu -4 308 1 277 248 19 43 chr17 5286137 5286298 -84218255 + A-rich Low_complexity Low_complexity 6 162 0 390 318 60 35 chr17 5286825 5287026 -84217527 + MIR SINE MIR 57 262 0 1006 177 28 19 chr17 5287295 5287510 -84217043 - AluSg/x SINE Alu -5 307 91 2490 0 0 17 chr17 5287546 5287839 -84216714 + AluYa5 SINE Alu 18 305 -6 2112 100 4 0 chr17 5287941 5288260 -84216293 + AluSx SINE Alu 1 320 0 601 271 18 18 chr17 5288371 5288537 -84216016 + MER5A DNA MER1_type 24 189 0 1938 115 45 0 chr17 5288545 5288832 -84215721 - AluSp SINE Alu -13 300 1 260 252 110 47 chr17 5289162 5289289 -84215264 - Charlie2 DNA MER1_type -797 2065 1931 1475 190 3 27 chr17 5289297 5289568 -84214985 + AluJb SINE Alu 18 283 -29 264 30 0 0 chr17 5289568 5289601 -84214952 + (TATAA)n Simple_repeat Simple_repeat 4 36 0 1475 190 3 27 chr17 5289601 5289629 -84214924 + AluJb SINE Alu 283 310 -2 406 320 28 39 chr17 5289630 5289811 -84214742 - Charlie2 DNA MER1_type -2683 179 1 1436 87 36 14 chr17 5289885 5290104 -84214449 + AluY SINE Alu 84 307 -4 596 199 12 53 chr17 5290585 5290756 -84213797 + Charlie2 DNA MER1_type 2692 2855 -7 2112 114 3 0 chr17 5291141 5291440 -84213113 - AluSx SINE Alu -12 300 1 1537 127 91 36 chr17 5291683 5291958 -84212595 - AluJb SINE Alu -22 290 1 289 286 13 0 chr17 5291986 5292063 -84212490 + L2 LINE L2 3186 3263 -9 193 327 35 44 chr17 5293260 5293373 -84211180 - L2 LINE L2 -219 3053 2942 199 319 42 0 chr17 5293380 5293452 -84211101 + L2 LINE L2 2884 2958 -356 2067 103 3 10 chr17 5293470 5293780 -84210773 - AluSp SINE Alu -5 308 1 2184 78 3 19 chr17 5293786 5294093 -84210460 - AluSq SINE Alu -11 302 1 228 224 0 0 chr17 5294201 5294250 -84210303 - MLT1K LTR MaLR -339 249 201 303 353 101 29 chr17 5294452 5294575 -84209978 + L2 LINE L2 1019 1132 -2182 2066 107 3 17 chr17 5294575 5294709 -84209844 + AluSg SINE Alu 1 135 -175 2277 98 3 0 chr17 5294709 5295016 -84209537 + AluSg SINE Alu 1 308 -2 2066 107 3 17 chr17 5295016 5295179 -84209374 + AluSg SINE Alu 135 294 -16 303 353 101 29 chr17 5295179 5295361 -84209192 + L2 LINE L2 1132 1346 -1968 589 180 73 101 chr17 5295549 5295567 -84208986 - MER5B DNA MER1_type -2 176 159 7798 64 2 3 chr17 5295567 5296537 -84208016 + LTR5 LTR ERVK 1 969 0 589 180 73 101 chr17 5296537 5296696 -84207857 - MER5B DNA MER1_type -19 159 4 970 136 14 127 chr17 5296707 5296856 -84207697 + MER5A DNA MER1_type 1 121 -68 2048 120 3 19 chr17 5296856 5297173 -84207380 - AluSx SINE Alu 0 312 1 970 136 14 127 chr17 5297173 5297236 -84207317 + MER5A DNA MER1_type 121 189 0 2260 99 0 3 chr17 5297339 5297653 -84206900 - AluSp SINE Alu 0 313 1 2001 123 0 3 chr17 5298056 5298378 -84206175 - AluSx SINE Alu 0 321 1 420 226 0 12 chr17 5298788 5298872 -84205681 + Tigger5 DNA MER2_type 1 83 -2240 1221 111 12 0 chr17 5298878 5299049 -84205504 - AluSg/x SINE Alu -2 310 138 846 87 17 0 chr17 5299080 5299195 -84205358 + AluSq/x SINE Alu 1 117 -195 2049 115 26 0 chr17 5299195 5299499 -84205054 - AluSx SINE Alu 0 312 1 477 181 0 0 chr17 5299499 5299582 -84204971 + Tigger5 DNA MER2_type 2241 2323 0 372 236 28 69 chr17 5300052 5300196 -84204357 - MER117 DNA MER1_type -57 140 3 976 113 0 0 chr17 5300358 5300500 -84204053 - AluSp/q SINE Alu -4 309 168 1004 149 24 100 chr17 5300500 5300749 -84203804 - L1 LINE L1 -1114 5032 4803 2130 113 3 3 chr17 5300799 5301100 -84203453 + AluSx SINE Alu 10 310 -2 2091 75 6 53 chr17 5301419 5301738 -84202815 + AluSg SINE Alu 2 305 -5 743 189 13 19 chr17 5301877 5302036 -84202517 - MLT1B LTR MaLR -41 349 192 218 171 0 0 chr17 5302087 5302122 -84202431 + GA-rich Low_complexity Low_complexity 1 35 0 427 215 16 0 chr17 5302137 5302258 -84202295 + CT-rich Low_complexity Low_complexity 1 123 0 595 180 0 27 chr17 5302258 5302369 -84202184 - AluJb SINE Alu -3 309 202 1359 177 0 4 chr17 5302371 5302603 -84201950 - AluJo SINE Alu -73 239 9 327 207 129 43 chr17 5302626 5302742 -84201811 - MLT1B LTR MaLR -263 127 2 1849 117 3 23 chr17 5302809 5303109 -84201444 - AluSg SINE Alu -15 295 2 936 117 0 0 chr17 5303200 5303328 -84201225 - AluJb SINE Alu -23 289 162 244 208 56 14 chr17 5303457 5303529 -84201024 - MIR SINE MIR -75 187 113 229 83 83 21 chr17 5303831 5303879 -84200674 + LTR41 LTR ERVL 711 761 -12 1031 243 10 17 chr17 5304643 5304935 -84199618 - AluSq SINE Alu -12 301 12 1185 137 55 136 chr17 5305483 5305852 -84198701 - MER4C LTR ERV1 0 473 149 5043 78 39 58 chr17 5305971 5306827 -84197726 - SVA Other Other -519 867 29 1531 123 0 25 chr17 5306831 5307066 -84197487 - AluSq SINE Alu 0 313 85 2231 115 0 3 chr17 5307120 5307433 -84197120 - AluSq SINE Alu -1 312 1 2296 66 3 10 chr17 5307442 5307745 -84196808 - AluSp SINE Alu -12 301 1 1288 206 0 23 chr17 5307828 5308129 -84196424 - AluSg SINE Alu -16 294 1 822 169 5 77 chr17 5308154 5308349 -84196204 - LTR62 LTR ERVK -538 181 1 826 269 90 35 chr17 5308792 5309160 -84195393 - MLT1H1 LTR MaLR 0 555 168 1460 88 5 5 chr17 5309163 5309367 -84195186 - AluSx SINE Alu -16 294 91 748 209 32 41 chr17 5309367 5309587 -84194966 - LTR7 LTR ERV1 0 450 233 756 161 0 0 chr17 5311732 5311850 -84192703 + AluSg/x SINE Alu 177 294 -16 823 214 28 6 chr17 5311850 5311969 -84192584 + AluJo SINE Alu 1 127 -185 509 0 16 0 chr17 5311969 5312030 -84192523 + (CA)n Simple_repeat Simple_repeat 2 63 0 823 214 28 6 chr17 5312030 5312092 -84192461 + AluJo SINE Alu 127 186 -126 729 123 9 0 chr17 5312111 5312217 -84192336 - AluSx SINE Alu -202 111 5 2184 86 3 16 chr17 5312602 5312906 -84191647 + AluSg SINE Alu 5 304 -6 968 177 0 0 chr17 5312909 5313067 -84191486 + AluJb SINE Alu 140 297 -15 1719 175 0 7 chr17 5313073 5313370 -84191183 + AluJo SINE Alu 5 299 -13 396 295 18 9 chr17 5313439 5313551 -84191002 + L2 LINE L2 3159 3271 -42 2188 113 0 6 chr17 5314100 5314411 -84190142 - AluSx SINE Alu -2 310 2 674 173 17 12 chr17 5314533 5314706 -84189847 + CT-rich Low_complexity Low_complexity 5 178 0 627 163 10 0 chr17 5314745 5314843 -84189710 - AluJ/FLAM SINE Alu -212 100 2 1967 202 24 71 chr17 5315312 5315363 -84189190 + LTR31 LTR ERV1 1 53 -566 1607 164 38 11 chr17 5315363 5315488 -84189065 + AluJo SINE Alu 3 123 -189 270 0 0 0 chr17 5315488 5315518 -84189035 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1607 164 38 11 chr17 5315518 5315679 -84188874 + AluJo SINE Alu 123 297 -15 1967 202 24 71 chr17 5315679 5315803 -84188750 + LTR31 LTR ERV1 53 181 -438 2327 104 10 10 chr17 5315803 5316112 -84188441 + AluSq SINE Alu 1 309 -4 1967 202 24 71 chr17 5316112 5316503 -84188050 + LTR31 LTR ERV1 181 553 -66 2303 55 0 35 chr17 5316503 5316814 -84187739 + AluY SINE Alu 1 300 -11 1967 202 24 71 chr17 5316814 5316862 -84187691 + LTR31 LTR ERV1 553 602 -17 303 250 70 0 chr17 5317098 5317198 -84187355 + (CAGTG)n Simple_repeat Simple_repeat 4 110 0 2081 126 3 10 chr17 5317469 5317770 -84186783 - AluSx SINE Alu -8 304 6 2205 99 0 7 chr17 5318138 5318441 -84186112 - AluSc SINE Alu 0 301 1 2397 57 0 3 chr17 5318786 5319069 -84185484 + AluSq SINE Alu 25 306 -7 362 236 63 0 chr17 5319210 5319349 -84185204 - MIR SINE MIR -70 138 45 2275 98 0 10 chr17 5320454 5320759 -84183794 + AluSx SINE Alu 1 302 -10 302 280 131 0 chr17 5320977 5321084 -84183469 + MIR3 SINE MIR 36 156 -52 208 338 26 13 chr17 5321377 5321454 -84183099 - L2 LINE L2 -241 3031 2954 2094 121 3 19 chr17 5322161 5322475 -84182078 - AluSp SINE Alu -3 310 2 1110 219 93 7 chr17 5322803 5323082 -84181471 + MLT1D LTR MaLR 41 343 -162 1712 71 9 0 chr17 5323259 5323494 -84181059 - AluSg/x SINE Alu 0 306 70 2279 106 0 0 chr17 5323613 5323906 -84180647 + AluSg SINE Alu 17 309 -1 691 291 57 0 chr17 5323911 5324121 -84180432 + L1ME3A LINE L1 5944 6165 -5 228 35 0 0 chr17 5324595 5324624 -84179929 + (TG)n Simple_repeat Simple_repeat 2 30 0 5765 30 0 3 chr17 5324624 5325333 -84179220 - L1PA4 LINE L1 -4 6151 5445 736 71 0 0 chr17 5325333 5325428 -84179125 + L1PA5 LINE L1 6054 6152 -2 437 153 0 0 chr17 5325464 5325536 -84179017 - AluJ/FLAM SINE Alu -239 73 2 2361 105 7 0 chr17 5325545 5325851 -84178702 - AluSx SINE Alu -4 308 1 660 149 61 0 chr17 5326012 5326126 -84178427 - FLAM_C SINE Alu -17 126 6 2131 221 46 63 chr17 5326159 5326250 -84178303 + MER77 LTR ERV1 46 137 -468 2383 87 0 7 chr17 5326250 5326548 -84178005 + AluSg SINE Alu 1 296 -14 2099 140 0 3 chr17 5326558 5326858 -84177695 + AluSx SINE Alu 1 299 -13 2131 221 46 63 chr17 5326858 5327325 -84177228 + MER77 LTR ERV1 146 605 0 699 151 0 125 chr17 5327517 5327669 -84176884 + FLAM_A SINE Alu 1 133 0 2101 102 0 47 chr17 5327677 5327999 -84176554 + AluSg SINE Alu 1 307 -3 2261 95 3 7 chr17 5328007 5328302 -84176251 + AluSx SINE Alu 4 297 -15 298 264 0 0 chr17 5328667 5328739 -84175814 - MIR SINE MIR -176 86 15 227 174 22 0 chr17 5328779 5328825 -84175728 + L2 LINE L2 3224 3270 -2 2081 104 0 28 chr17 5329022 5329311 -84175242 - AluSq SINE Alu -31 282 2 2355 79 0 13 chr17 5329323 5329626 -84174927 - AluY SINE Alu -12 299 1 2330 106 0 3 chr17 5329901 5330204 -84174349 - AluSq SINE Alu -11 302 1 297 272 237 18 chr17 5330330 5330444 -84174109 - MIR3 SINE MIR -21 187 49 2183 106 0 32 chr17 5330782 5331094 -84173459 - AluSx SINE Alu -10 302 1 316 248 106 39 chr17 5331130 5331286 -84173267 + MIR SINE MIR 34 204 -58 2354 80 0 10 chr17 5331385 5331684 -84172869 - AluY SINE Alu -15 296 1 291 28 0 0 chr17 5331685 5331721 -84172832 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 2193 101 22 0 chr17 5331721 5331998 -84172555 - AluSg SINE Alu -27 283 1 322 234 120 53 chr17 5382153 5382300 -84122253 + L1M4 LINE L1 4469 4636 -1510 1982 101 8 0 chr17 5382300 5382557 -84121996 - AluSp SINE Alu -18 295 37 322 234 120 53 chr17 5382557 5382618 -84121935 + L1M4 LINE L1 4636 4691 -1455 2441 48 35 7 chr17 5382650 5382939 -84121614 + AluY SINE Alu 1 297 -14 1859 153 0 0 chr17 5382939 5383213 -84121340 - AluSx SINE Alu -37 275 1 285 250 26 13 chr17 5383385 5383461 -84121092 - LTR67 LTR ERVL -380 177 101 1935 108 0 0 chr17 5383535 5383786 -84120767 + AluSg SINE Alu 54 304 -6 663 312 75 20 chr17 5383850 5384142 -84120411 + L2 LINE L2 1121 1428 -1886 271 222 42 0 chr17 5384170 5384242 -84120311 + L2 LINE L2 1541 1615 -1699 1938 133 3 10 chr17 5384242 5384535 -84120018 - AluSg SINE Alu -19 291 1 414 140 0 0 chr17 5384573 5384630 -84119923 - AluS SINE Alu -260 58 2 637 237 59 0 chr17 5384630 5384782 -84119771 + MER20 DNA MER1_type 54 214 -5 501 281 6 18 chr17 5385172 5385336 -84119217 + AluSq SINE Alu 147 308 -5 2424 96 0 0 chr17 5385339 5385642 -84118911 + AluSc SINE Alu 3 305 -4 2289 216 111 27 chr17 5385644 5385806 -84118747 + L1M4 LINE L1 4462 4609 -1537 2045 133 7 0 chr17 5385806 5386099 -84118454 - AluSq SINE Alu -18 295 1 2289 216 111 27 chr17 5386099 5386574 -84117979 + L1M4 LINE L1 4609 5174 -972 2284 116 6 0 chr17 5386574 5386885 -84117668 + AluSp SINE Alu 1 313 0 2289 216 111 27 chr17 5386885 5386997 -84117556 + L1M4 LINE L1 5174 5275 -871 250 217 103 69 chr17 5387099 5387274 -84117279 + Charlie7 DNA MER1_type 508 688 -1924 1356 136 148 38 chr17 5387417 5387653 -84116900 - AluJo SINE Alu -17 295 34 254 234 0 0 chr17 5387669 5387716 -84116837 + L2 LINE L2 3255 3301 -12 2346 99 0 3 chr17 5387718 5388021 -84116532 + AluSq SINE Alu 1 302 -11 2452 154 20 18 chr17 5388021 5388476 -84116077 + LTR62 LTR ERVK 262 717 -2 459 252 25 0 chr17 5388650 5388769 -84115784 - AluSq/x SINE Alu -190 123 2 1523 176 20 36 chr17 5388845 5389146 -84115407 - AluSx SINE Alu -16 296 1 330 257 37 37 chr17 5389267 5389376 -84115177 - MIR SINE MIR 0 262 154 2036 128 44 3 chr17 5389421 5389719 -84114834 - AluSg SINE Alu 0 310 1 2212 119 7 3 chr17 5389729 5390031 -84114522 - AluSx SINE Alu -9 303 1 2397 69 0 3 chr17 5390109 5390400 -84114153 + AluY SINE Alu 4 293 -18 197 302 32 0 chr17 5390757 5390820 -84113733 + L2 LINE L2 2714 2778 -536 2308 89 27 0 chr17 5390826 5391118 -84113435 + AluSx SINE Alu 1 300 -12 2269 106 3 7 chr17 5392525 5392827 -84111726 - AluSx SINE Alu -2 310 10 944 147 4 113 chr17 5392897 5393128 -84111425 + L1 LINE L1 4827 5032 -1114 1004 105 0 7 chr17 5393128 5393271 -84111282 + AluSp/q SINE Alu 168 309 -4 321 254 28 70 chr17 5393435 5393577 -84110976 + MER117 DNA MER1_type 5 140 -57 505 169 0 0 chr17 5394047 5394130 -84110423 - Tigger5 DNA MER2_type 0 2323 2241 2051 117 25 0 chr17 5394130 5394412 -84110141 + AluSx SINE Alu 1 289 -23 86 103 0 0 chr17 5394619 5394891 -84109662 + GC_rich Low_complexity Low_complexity 1 272 0 2067 115 0 16 chr17 5394971 5395307 -84109246 + AluY SINE Alu 3 311 0 407 319 32 13 chr17 5395330 5395487 -84109066 - Charlie2 DNA MER1_type -2622 160 1 1485 99 36 14 chr17 5395561 5395784 -84108769 + AluY SINE Alu 84 311 0 611 199 12 53 chr17 5396260 5396431 -84108122 + Charlie2 DNA MER1_type 2692 2855 -7 2266 107 3 0 chr17 5396813 5397112 -84107441 - AluSx SINE Alu -12 300 1 183 348 162 29 chr17 5397113 5397317 -84107236 + L2 LINE L2 3029 3259 -13 1629 131 91 36 chr17 5397355 5397630 -84106923 - AluJb SINE Alu -22 290 1 314 286 13 0 chr17 5397658 5397735 -84106818 + L2 LINE L2 3186 3263 -9 199 319 35 44 chr17 5398919 5399032 -84105521 - L2 LINE L2 -219 3053 2942 213 319 42 0 chr17 5399039 5399111 -84105442 + L2 LINE L2 2883 2957 -356 2390 81 3 3 chr17 5399129 5399437 -84105116 - AluSp SINE Alu -5 308 1 2368 81 0 16 chr17 5399443 5399750 -84104803 - AluSq SINE Alu -11 302 1 323 341 99 41 chr17 5400109 5400232 -84104321 + L2 LINE L2 1019 1134 -2180 2180 108 3 17 chr17 5400232 5400366 -84104187 + AluSg SINE Alu 1 135 -175 2427 101 0 0 chr17 5400366 5400673 -84103880 + AluSg SINE Alu 1 307 -3 2180 108 3 17 chr17 5400673 5400835 -84103718 + AluSg SINE Alu 135 293 -17 323 341 99 41 chr17 5400835 5401025 -84103528 + L2 LINE L2 1134 1350 -1964 556 185 73 101 chr17 5401205 5401223 -84103330 - MER5B DNA MER1_type -2 176 159 8564 52 2 0 chr17 5401223 5402190 -84102363 + LTR5 LTR ERVK 1 969 0 556 185 73 101 chr17 5402190 5402349 -84102204 - MER5B DNA MER1_type -19 159 4 1041 137 15 93 chr17 5402360 5402501 -84102052 + MER5A DNA MER1_type 1 123 -66 2197 112 3 40 chr17 5402501 5402824 -84101729 - AluSx SINE Alu -1 311 1 1041 137 15 93 chr17 5402824 5402887 -84101666 + MER5A DNA MER1_type 123 189 0 2420 99 0 0 chr17 5402990 5403303 -84101250 - AluSp SINE Alu 0 313 1 2149 124 0 0 chr17 5403704 5404026 -84100527 - AluSp SINE Alu 0 324 3 449 222 0 11 chr17 5404438 5404528 -84100025 + Tigger5 DNA MER2_type 1 89 -2234 1300 111 12 0 chr17 5404528 5404700 -84099853 - AluSg/x SINE Alu -1 311 138 885 73 0 0 chr17 5404731 5404841 -84099712 + AluSq/x SINE Alu 1 110 -203 258 95 0 0 chr17 5404841 5404883 -84099670 + (T)n Simple_repeat Simple_repeat 1 42 0 1051 102 0 0 chr17 5405314 5405442 -84099111 + AluSq/x SINE Alu 6 133 -180 2362 94 0 0 chr17 5405445 5405754 -84098799 + AluY SINE Alu 1 309 -2 244 256 44 22 chr17 5405755 5405845 -84098708 + Charlie2 DNA MER1_type 219 310 -2472 1564 174 4 18 chr17 5405918 5406193 -84098360 - AluJb SINE Alu -24 288 18 275 246 111 40 chr17 5406201 5406327 -84098226 + Charlie2 DNA MER1_type 1931 2065 -797 2075 109 46 0 chr17 5406656 5406941 -84097612 + AluSp SINE Alu 1 298 -15 645 259 24 24 chr17 5406951 5407117 -84097436 - MER5A DNA MER1_type 0 189 24 2234 100 4 0 chr17 5407227 5407546 -84097007 - AluSx SINE Alu 0 320 1 2888 10 0 0 chr17 5407648 5407955 -84096598 - AluYa5 SINE Alu -4 307 1 2105 121 0 23 chr17 5408422 5408727 -84095826 - AluSx SINE Alu -14 298 1 2463 84 0 0 chr17 5408750 5409048 -84095505 - AluY SINE Alu -13 298 1 2522 77 0 3 chr17 5410096 5410408 -84094145 - AluY SINE Alu 0 311 1 2034 143 10 0 chr17 5410458 5410758 -84093795 - AluJo SINE Alu -9 303 1 656 251 157 61 chr17 5410891 5411350 -84093203 - LTR33 LTR ERVL -9 512 10 654 330 76 45 chr17 5411390 5411836 -84092717 + L2 LINE L2 2183 2642 -672 320 78 0 0 chr17 5411862 5411913 -84092640 - AluY SINE Alu -169 132 82 1582 107 9 0 chr17 5411913 5412128 -84092425 - AluY SINE Alu -94 217 1 907 264 73 58 chr17 5412497 5412993 -84091560 - MLT1J LTR MaLR -8 503 1 1693 182 0 14 chr17 5413052 5413338 -84091215 - AluJo SINE Alu -30 282 1 294 283 55 7 chr17 5413666 5413811 -84090742 + L1M4 LINE L1 4776 4927 -1219 2043 141 7 0 chr17 5414053 5414344 -84090209 - AluSx SINE Alu -14 298 6 802 117 23 8 chr17 5414625 5414753 -84089800 - AluJb SINE Alu -7 305 176 926 154 7 20 chr17 5416556 5416705 -84087848 - FRAM SINE Alu -12 164 18 755 205 0 0 chr17 5417614 5417731 -84086822 - FLAM_C SINE Alu -25 118 2 533 287 105 17 chr17 5417836 5418017 -84086536 + MIR3 SINE MIR 9 205 -3 564 222 171 64 chr17 5418074 5418169 -84086384 - MIR SINE MIR -2 260 177 486 167 49 0 chr17 5418169 5418271 -84086282 - L1MB8 LINE L1 0 6178 6072 564 222 171 64 chr17 5418271 5418409 -84086144 - MIR SINE MIR -85 177 2 2620 48 0 0 chr17 5421586 5421898 -84082655 + AluSx SINE Alu 1 312 0 2232 83 0 16 chr17 5421904 5422218 -84082335 + AluSg SINE Alu 1 309 -1 2351 91 0 0 chr17 5422375 5422682 -84081871 + AluSx SINE Alu 3 309 -3 2040 87 45 3 chr17 5423413 5423701 -84080852 + AluSp SINE Alu 2 301 -12 307 359 65 52 chr17 5423983 5424367 -84080186 + L2 LINE L2 2864 3252 -20 700 244 144 0 chr17 5424371 5424572 -84079981 - L1MEc LINE L1 -5955 441 212 1284 111 26 5 chr17 5424580 5424770 -84079783 + AluJb SINE Alu 1 194 -118 225 0 0 0 chr17 5424809 5424834 -84079719 + (A)n Simple_repeat Simple_repeat 1 25 0 598 216 74 45 chr17 5424834 5425010 -84079543 - L1MEc LINE L1 -6177 219 39 1800 170 7 0 chr17 5425018 5425318 -84079235 - AluJb SINE Alu -10 302 1 2417 77 0 3 chr17 5425486 5425796 -84078757 - AluSq SINE Alu 0 313 5 27 0 0 0 chr17 5425806 5425833 -84078720 + AT_rich Low_complexity Low_complexity 1 27 0 413 312 57 6 chr17 5426006 5426163 -84078390 + MIR SINE MIR 24 188 -74 210 355 157 29 chr17 5426511 5426855 -84077698 + L2 LINE L2 2498 2885 -429 348 173 298 19 chr17 5426866 5426970 -84077583 - FLAM_A SINE Alu 0 133 1 622 242 124 27 chr17 5426971 5427157 -84077396 + MER63A DNA MER1_type 7 210 0 586 178 29 106 chr17 5427222 5427293 -84077260 + LTR41 LTR ERVL 580 655 -118 1808 166 0 7 chr17 5427293 5427583 -84076970 - AluJb SINE Alu -24 288 1 1971 116 0 33 chr17 5427593 5427894 -84076659 - AluSx SINE Alu -21 291 1 586 178 29 106 chr17 5427894 5428019 -84076534 + LTR41 LTR ERVL 664 771 -2 844 163 0 15 chr17 5428080 5428215 -84076338 + FLAM_C SINE Alu 1 133 0 2289 61 14 3 chr17 5428315 5428612 -84075941 + AluY SINE Alu 1 300 -11 2118 110 0 3 chr17 5428624 5428924 -84075629 + AluSc SINE Alu 1 299 -10 336 301 17 80 chr17 5429990 5430166 -84074387 + L1ME4a LINE L1 5957 6121 0 2521 61 0 0 chr17 5430491 5430801 -84073752 + AluY SINE Alu 2 311 0 2109 96 21 0 chr17 5430927 5431218 -84073335 - AluSx SINE Alu -15 297 1 305 252 47 65 chr17 5431344 5431451 -84073102 + L1MDa LINE L1 1984 2088 -4452 244 208 56 14 chr17 5432089 5432161 -84072392 - MIR SINE MIR -75 187 113 229 83 83 21 chr17 5432462 5432510 -84072043 + LTR41 LTR ERVL 711 761 -12 2107 119 0 7 chr17 5433273 5433575 -84070978 - AluSx SINE Alu -12 300 1 1252 154 32 104 chr17 5434114 5434722 -84069831 - MER4C LTR ERV1 0 465 1 405 473 64 32 chr17 5435829 5436110 -84068443 - AluSg SINE Alu -1 309 20 21 0 0 0 chr17 5436117 5436138 -84068415 + AT_rich Low_complexity Low_complexity 1 21 0 1411 108 28 9 chr17 5436146 5436358 -84068195 + AluSg/x SINE Alu 92 307 -5 410 315 71 25 chr17 5436627 5436824 -84067729 - MIR SINE MIR 0 262 57 2134 111 3 0 chr17 5437922 5438229 -84066324 + AluSx SINE Alu 1 308 -4 757 171 142 0 chr17 5438246 5438422 -84066131 + MLT1A2 LTR MaLR 174 374 0 2027 101 3 0 chr17 5438644 5438930 -84065623 + AluSx SINE Alu 1 287 -25 189 0 0 0 chr17 5438930 5438951 -84065602 + (CA)n Simple_repeat Simple_repeat 2 22 0 200 259 25 0 chr17 5439632 5439713 -84064840 + (CCCCG)n Simple_repeat Simple_repeat 4 86 0 432 324 103 5 chr17 5440064 5440268 -84064285 + MIR SINE MIR 31 254 -8 239 274 128 26 chr17 5440254 5440371 -84064182 - L2 LINE L2 -301 3012 2884 * 292 304 25 44 chr17 5440485 5440612 -84063941 + L2 LINE L2 3159 3284 -29 2291 78 0 0 chr17 5440612 5440907 -84063646 + AluSg SINE Alu 3 297 -13 292 304 25 44 chr17 5440907 5440937 -84063616 + L2 LINE L2 3284 3313 0 501 265 107 20 chr17 5440958 5441154 -84063399 - L2 LINE L2 -515 2799 2587 1559 114 125 37 chr17 5441187 5441459 -84063094 + AluSg SINE Alu 1 296 -14 2450 222 65 36 chr17 5441566 5442259 -84062294 - LTR28 LTR ERV1 0 1020 308 350 176 24 35 chr17 5442228 5442313 -84062240 - LTR1 LTR ERV1 -595 190 107 * 399 244 267 0 chr17 5442324 5442459 -84062094 - LTR28 LTR ERV1 -842 178 8 24 0 0 0 chr17 5443082 5443106 -84061447 + AT_rich Low_complexity Low_complexity 1 24 0 311 319 104 7 chr17 5443133 5443268 -84061285 - MIR SINE MIR -34 228 81 216 0 0 0 chr17 5443884 5443908 -84060645 + (TCTG)n Simple_repeat Simple_repeat 3 26 0 319 259 126 21 chr17 5444239 5444382 -84060171 - MIR3 SINE MIR -7 201 44 192 346 38 53 chr17 5445200 5445596 -84058957 - L2 LINE L2 -427 2887 2498 198 71 0 0 chr17 5446760 5446788 -84057765 + (GCGTG)n Simple_repeat Simple_repeat 4 31 0 201 121 0 0 chr17 5447177 5447210 -84057343 + (CA)n Simple_repeat Simple_repeat 2 34 0 279 133 0 0 chr17 5447268 5447313 -84057240 + (CA)n Simple_repeat Simple_repeat 1 45 0 238 108 37 0 chr17 5447884 5447935 -84056618 - MLT-int LTR MaLR -1155 216 142 796 162 14 152 chr17 5447935 5448145 -84056408 + MLT1C LTR MaLR 210 467 0 3138 136 4 8 chr17 5448340 5448825 -84055728 + MER1A DNA MER1_type 47 529 0 549 68 0 0 chr17 5449024 5449098 -84055455 + (CA)n Simple_repeat Simple_repeat 2 75 0 2300 92 3 0 chr17 5449144 5449449 -84055104 - AluSp SINE Alu -7 306 1 213 204 23 11 chr17 5449999 5450087 -84054466 + CT-rich Low_complexity Low_complexity 1 89 0 210 222 0 0 chr17 5450397 5450442 -84054111 + G-rich Low_complexity Low_complexity 4 48 0 183 80 0 0 chr17 5450925 5450950 -84053603 + (TGGA)n Simple_repeat Simple_repeat 4 28 0 2019 158 24 3 chr17 5451030 5451366 -84053187 + MER2 DNA MER2_type 2 344 0 257 178 10 139 chr17 5452362 5452463 -84052090 - SN5 Other centromeric -68 387 300 1305 293 43 27 chr17 5457724 5458392 -84046161 + L1MC3 LINE L1 5486 6164 -1621 464 249 60 100 chr17 5463524 5463663 -84040890 - L1MD3 LINE L1 0 7995 7852 1643 169 0 26 chr17 5463663 5463971 -84040582 + AluJo SINE Alu 1 300 -12 464 249 60 100 chr17 5463971 5464132 -84040421 - L1MD3 LINE L1 -143 7852 7707 444 173 0 37 chr17 5464326 5464407 -84040146 - AluJ/FRAM SINE Alu -15 297 220 1614 124 86 4 chr17 5464407 5464674 -84039879 + MER7A DNA MER2_type 56 342 -4 1737 142 16 50 chr17 5466289 5466425 -84038128 + AluSx SINE Alu 1 140 -172 6252 33 0 7 chr17 5466425 5467150 -84037403 + SVA Other Other 665 1384 -2 1737 142 16 50 chr17 5467150 5467330 -84037223 + AluSx SINE Alu 140 306 -6 239 222 30 30 chr17 5467594 5467736 -84036817 + (TTATA)n Simple_repeat Simple_repeat 1 142 0 222 365 117 7 chr17 5470678 5470815 -84033738 - MIR3 SINE MIR -15 193 42 686 200 113 16 chr17 5471120 5471251 -84033302 + MER3 DNA MER1_type 4 160 -49 1689 202 10 0 chr17 5471251 5471558 -84032995 - AluJb SINE Alu -2 310 1 686 200 113 16 chr17 5471558 5471611 -84032942 + MER3 DNA MER1_type 160 206 -3 31 44 0 0 chr17 5472255 5472300 -84032253 + AT_rich Low_complexity Low_complexity 1 45 0 2367 122 0 0 chr17 5472501 5472813 -84031740 + AluSx SINE Alu 1 312 0 591 206 8 23 chr17 5472839 5472970 -84031583 + FAM SINE Alu 1 46 -3 355 302 147 16 chr17 5473261 5473390 -84031163 + MIR3 SINE MIR 2 147 -61 2148 115 7 0 chr17 5473393 5473672 -84030881 + AluSq SINE Alu 1 281 -32 399 21 0 0 chr17 5473672 5473720 -84030833 + (TAAA)n Simple_repeat Simple_repeat 1 48 0 1233 229 151 49 chr17 5473809 5473880 -84030673 - MLT1D LTR MaLR 0 505 443 2320 92 7 3 chr17 5473880 5474174 -84030379 - AluSc SINE Alu -14 295 1 1233 229 151 49 chr17 5474174 5474547 -84030006 - MLT1D LTR MaLR -62 443 16 1463 228 139 37 chr17 5474600 5474813 -84029740 + L1ME3A LINE L1 4399 4589 -1557 347 0 23 0 chr17 5474813 5474856 -84029697 + (TG)n Simple_repeat Simple_repeat 1 44 0 1463 228 139 37 chr17 5474856 5475338 -84029215 + L1ME3A LINE L1 4589 5165 -981 2293 106 0 17 chr17 5475338 5475639 -84028914 + AluSg SINE Alu 1 296 -14 817 262 84 42 chr17 5475655 5476102 -84028451 + L1ME3A LINE L1 5407 5899 -271 1909 169 3 0 chr17 5476102 5476397 -84028156 + AluJb SINE Alu 6 301 -11 817 262 84 42 chr17 5476397 5476457 -84028096 + L1ME3A LINE L1 5899 5955 -215 282 297 34 47 chr17 5476524 5476672 -84027881 + L1ME3A LINE L1 5968 6113 -57 2374 95 3 0 chr17 5476672 5476968 -84027585 - AluSp SINE Alu -16 297 1 2259 116 0 3 chr17 5477035 5477336 -84027217 - AluSg SINE Alu -10 300 1 1670 170 12 49 chr17 5478094 5478418 -84026135 - AluJo SINE Alu 0 312 1 37 52 0 0 chr17 5479104 5479162 -84025391 + AT_rich Low_complexity Low_complexity 1 58 0 2363 106 6 0 chr17 5479680 5479991 -84024562 - AluSp SINE Alu 0 313 1 2033 143 10 0 chr17 5480122 5480415 -84024138 - AluSx SINE Alu -16 296 1 35 74 0 11 chr17 5480417 5480461 -84024092 + AT_rich Low_complexity Low_complexity 1 44 -50 2302 106 0 6 chr17 5480461 5480773 -84023780 - AluSx SINE Alu -2 310 1 35 74 0 11 chr17 5480773 5480823 -84023730 + AT_rich Low_complexity Low_complexity 44 94 0 819 234 112 115 chr17 5480957 5481041 -84023512 - L2 LINE L2 -799 2515 2432 2158 95 15 0 chr17 5481041 5481314 -84023239 - AluSc SINE Alu -32 277 1 819 234 112 115 chr17 5481314 5481674 -84022879 - L2 LINE L2 -882 2432 2072 1514 155 43 0 chr17 5481682 5481960 -84022593 + AluJb SINE Alu 10 299 -13 1494 146 107 23 chr17 5482138 5482399 -84022154 + AluJo SINE Alu 30 312 0 1065 77 14 43 chr17 5482441 5482649 -84021904 - AluSc SINE Alu -15 294 2 562 170 94 9 chr17 5482689 5482795 -84021758 + MLT1B LTR MaLR 1 115 -275 1809 88 0 0 chr17 5482797 5483024 -84021529 + AluSp SINE Alu 87 313 0 1715 194 0 3 chr17 5483775 5484068 -84020485 + AluJo SINE Alu 11 302 -10 2003 128 6 16 chr17 5484314 5484627 -84019926 + AluSx SINE Alu 1 310 -2 683 135 0 45 chr17 5484709 5484820 -84019733 + AluSx SINE Alu 2 107 -205 1236 146 23 0 chr17 5484923 5485142 -84019411 + AluSx SINE Alu 85 308 -4 419 271 145 42 chr17 5485171 5485385 -84019168 + MIR SINE MIR 21 256 -6 2181 105 0 3 chr17 5485551 5485847 -84018706 + AluSx SINE Alu 1 295 -17 2285 117 0 0 chr17 5485847 5486145 -84018408 + AluSg SINE Alu 1 298 -12 2178 93 0 81 chr17 5486919 5487114 -84017439 - AluSq SINE Alu -7 306 148 2215 77 45 0 chr17 5487114 5487400 -84017153 - AluY SINE Alu -12 299 1 2178 93 0 81 chr17 5487400 5487537 -84017016 - AluSq SINE Alu -165 148 1 1994 149 0 0 chr17 5487706 5487995 -84016558 + AluJb SINE Alu 1 289 -23 2231 116 3 0 chr17 5488086 5488379 -84016174 + AluSg SINE Alu 2 295 -15 326 205 126 47 chr17 5488445 5488572 -84015981 + MLT1B LTR MaLR 2 138 -252 1492 184 0 0 chr17 5488572 5488811 -84015742 + AluJo SINE Alu 1 239 -73 539 198 0 27 chr17 5488813 5488924 -84015629 + AluJb SINE Alu 202 309 -3 268 171 26 13 chr17 5488924 5489000 -84015553 + GA-rich Low_complexity Low_complexity 1 77 0 746 199 13 0 chr17 5489163 5489319 -84015234 + MLT1B LTR MaLR 192 349 -41 236 162 0 0 chr17 5489362 5489399 -84015154 + MLT1B LTR MaLR 354 390 0 2192 76 6 51 chr17 5489460 5489775 -84014778 - AluSg SINE Alu -8 302 2 573 287 80 23 chr17 5489784 5490084 -84014469 + L1MC/D LINE L1 5479 5795 -2013 2041 129 0 17 chr17 5490096 5490391 -84014162 + AluJb SINE Alu 11 300 -12 2360 105 0 0 chr17 5490391 5490686 -84013867 + AluSp SINE Alu 1 295 -18 1289 129 0 0 chr17 5490686 5490864 -84013689 + AluSc SINE Alu 132 309 0 2371 86 0 0 chr17 5491409 5491700 -84012853 + AluSc SINE Alu 5 295 -14 622 73 0 12 chr17 5491837 5491919 -84012634 - AluJb SINE Alu -148 164 84 1988 133 25 0 chr17 5491951 5492236 -84012317 + AluSx SINE Alu 1 292 -20 26 50 0 0 chr17 5492237 5492277 -84012276 + AT_rich Low_complexity Low_complexity 1 40 0 2289 89 20 0 chr17 5492330 5492622 -84011931 + AluSp SINE Alu 1 298 -15 2354 89 3 13 chr17 5492624 5492980 -84011573 + AluY SINE Alu 1 353 0 727 85 0 19 chr17 5493320 5493426 -84011127 - AluSp/q SINE Alu -12 301 198 2412 93 0 0 chr17 5493602 5493913 -84010640 - AluSq SINE Alu -2 311 1 291 320 27 7 chr17 5493953 5494103 -84010450 + L1ME LINE L1 5517 5669 -452 1857 173 7 0 chr17 5494271 5494566 -84009987 - AluJb SINE Alu -15 297 1 346 237 12 31 chr17 5494588 5494731 -84009822 - L1MC/D LINE L1 -719 5455 5314 2261 120 3 3 chr17 5494785 5495094 -84009459 - AluSp SINE Alu -2 311 3 310 186 0 0 chr17 5495174 5495233 -84009320 - L1MB5 LINE L1 -214 5960 5902 2185 101 50 0 chr17 5495535 5495832 -84008721 - AluSq SINE Alu -1 312 1 515 152 101 0 chr17 5496380 5496479 -84008074 - AluJo/FRAM SINE Alu -1 311 203 1563 142 24 12 chr17 5496479 5496604 -84007949 - AluJb SINE Alu -53 259 137 2322 104 0 0 chr17 5496604 5496902 -84007651 - AluSc SINE Alu -10 299 2 1563 142 24 12 chr17 5496902 5497030 -84007523 - AluJb SINE Alu -175 137 3 2385 78 0 0 chr17 5497190 5497510 -84007043 + AluSq SINE Alu 1 320 0 2327 106 3 0 chr17 5497558 5497869 -84006684 + AluSq SINE Alu 1 312 -1 288 0 0 0 chr17 5498370 5498402 -84006151 + (CA)n Simple_repeat Simple_repeat 2 33 0 2018 139 10 0 chr17 5498428 5498716 -84005837 + AluJo SINE Alu 1 291 -21 259 25 50 0 chr17 5498725 5498765 -84005788 + (TTTTA)n Simple_repeat Simple_repeat 1 42 0 2279 64 0 7 chr17 5498765 5499046 -84005507 - AluY SINE Alu -32 279 1 2145 110 0 0 chr17 5499251 5499532 -84005021 - AluSg SINE Alu -19 291 11 530 273 127 0 chr17 5499567 5499732 -84004821 - MIR SINE MIR -6 256 71 2288 94 3 13 chr17 5499806 5500113 -84004440 + AluSx SINE Alu 1 304 -8 2229 114 3 13 chr17 5500293 5500600 -84003953 - AluSx SINE Alu -8 304 1 253 314 49 10 chr17 5500829 5500931 -84003622 - MIR3 SINE MIR -100 108 3 231 182 158 87 chr17 5501050 5501153 -84003400 + MIR SINE MIR 27 138 -70 1745 166 10 30 chr17 5501399 5501701 -84002852 + AluJo SINE Alu 1 296 -16 2416 93 3 3 chr17 5501704 5502017 -84002536 + AluSp SINE Alu 1 313 0 202 313 113 45 chr17 5502024 5502289 -84002264 - L2 LINE L2 -160 3112 2830 2427 100 0 0 chr17 5502410 5502711 -84001842 + AluSx SINE Alu 1 301 -11 229 245 20 0 chr17 5502713 5502762 -84001791 + MIR3 SINE MIR 136 185 -23 1987 93 58 34 chr17 5503042 5503333 -84001220 + AluSp SINE Alu 2 299 -14 1645 164 42 18 chr17 5503838 5503962 -84000591 + AluJo SINE Alu 1 120 -182 2062 130 3 29 chr17 5503962 5504099 -84000454 + AluSx SINE Alu 1 140 -172 2296 92 0 4 chr17 5504099 5504424 -84000129 + AluSq SINE Alu 5 328 0 2062 130 3 29 chr17 5504424 5504616 -83999937 + AluSx SINE Alu 140 312 0 1645 164 42 18 chr17 5504616 5504777 -83999776 + AluJo SINE Alu 120 293 -9 2579 58 0 0 chr17 5504779 5505074 -83999479 + AluY SINE Alu 1 295 -16 1932 172 0 0 chr17 5505409 5505706 -83998847 + AluJo SINE Alu 10 306 -6 2137 92 4 0 chr17 5506102 5506374 -83998179 + AluSx SINE Alu 1 273 -39 254 308 33 33 chr17 5506444 5506535 -83998018 + MIR SINE MIR 17 107 -155 743 244 0 12 chr17 5506535 5506699 -83997854 - FRAM SINE Alu -14 162 1 2569 52 0 7 chr17 5506725 5507030 -83997523 + AluY SINE Alu 1 303 -8 361 302 87 8 chr17 5507106 5507232 -83997321 - L2 LINE L2 -1 3271 3136 1143 157 0 64 chr17 5507232 5507406 -83997147 - MER58B DNA MER1_type -2086 334 177 2183 100 3 23 chr17 5507406 5507707 -83996846 - AluSx SINE Alu -17 295 1 1143 157 0 64 chr17 5507707 5507767 -83996786 - MER58B DNA MER1_type -2243 177 115 849 175 13 7 chr17 5507769 5507923 -83996630 - AluJb SINE Alu 0 312 158 895 199 55 0 chr17 5507949 5508130 -83996423 + AluJo SINE Alu 121 311 -1 247 264 0 0 chr17 5508131 5508184 -83996369 - MER58B DNA MER1_type -254 87 35 2532 68 0 3 chr17 5508235 5508544 -83996009 + AluSx SINE Alu 1 308 -4 2150 86 59 3 chr17 5508617 5508907 -83995646 + AluSq SINE Alu 1 306 -7 1243 187 19 100 chr17 5508934 5509244 -83995309 + AluJb SINE Alu 2 286 -16 1878 135 0 10 chr17 5509645 5509933 -83994620 - AluSq SINE Alu -28 285 1 2302 58 4 7 chr17 5512508 5512784 -83991769 - AluSg SINE Alu -33 277 3 274 213 52 29 chr17 5513142 5513278 -83991275 + (CCCCG)n Simple_repeat Simple_repeat 5 143 0 201 74 0 0 chr17 5513475 5513502 -83991051 + (CTTG)n Simple_repeat Simple_repeat 1 27 0 2289 91 0 0 chr17 5513502 5513778 -83990775 - AluSg SINE Alu -28 282 4 518 228 179 19 chr17 5513879 5514041 -83990512 - MIR SINE MIR -44 218 31 1684 186 23 3 chr17 5514135 5514256 -83990297 + AluJo SINE Alu 1 118 -194 189 0 0 0 chr17 5514256 5514277 -83990276 + (CAAAA)n Simple_repeat Simple_repeat 2 22 0 1684 186 23 3 chr17 5514277 5514461 -83990092 + AluJo SINE Alu 118 312 0 2356 82 23 3 chr17 5514655 5514960 -83989593 - AluSx SINE Alu -1 311 1 2306 93 0 0 chr17 5515533 5515851 -83988702 + AluSc SINE Alu 1 318 0 1806 178 3 13 chr17 5515864 5516167 -83988386 + AluJb SINE Alu 13 312 0 2332 113 0 0 chr17 5516173 5516473 -83988080 + AluSq SINE Alu 1 300 -13 1628 146 103 11 chr17 5516981 5517262 -83987291 - AluJo SINE Alu -5 307 1 436 249 45 119 chr17 5517315 5517400 -83987153 + MIR SINE MIR 47 137 -125 710 197 31 0 chr17 5517400 5517527 -83987026 + FLAM_A SINE Alu 1 131 -2 2231 105 0 3 chr17 5517529 5517815 -83986738 + AluSx SINE Alu 1 314 0 186 35 69 0 chr17 5517815 5517844 -83986709 + (TAAA)n Simple_repeat Simple_repeat 2 180 0 436 249 45 119 chr17 5517844 5517931 -83986622 + MIR SINE MIR 138 210 -52 808 159 0 51 chr17 5518015 5518153 -83986400 - FLAM_C SINE Alu -12 131 1 1697 153 34 3 chr17 5518197 5518491 -83986062 - AluJb SINE Alu -9 303 1 2143 82 0 23 chr17 5519123 5519427 -83985126 - AluY SINE Alu -14 297 1 2209 113 0 0 chr17 5520001 5520310 -83984243 + AluSq SINE Alu 1 309 -4 303 124 101 34 chr17 5520310 5520366 -83984187 - LTR37A LTR ERV1 -8 418 352 1499 116 0 0 chr17 5520366 5520573 -83983980 + AluSg/x SINE Alu 85 291 -21 303 124 101 34 chr17 5520573 5520605 -83983948 - LTR37A LTR ERV1 -74 352 324 347 107 0 0 chr17 5520611 5520667 -83983886 + Alu SINE Alu 247 302 0 686 193 33 82 chr17 5520673 5520744 -83983809 - LTR37A LTR ERV1 -111 315 242 4423 131 68 30 chr17 5520744 5520913 -83983640 + LTR39 LTR ERV1 1 162 -621 1998 111 0 20 chr17 5520913 5521244 -83983309 + AluSx SINE Alu 1 312 0 4423 131 68 30 chr17 5521244 5521659 -83982894 + LTR39 LTR ERV1 162 622 -161 2398 81 0 0 chr17 5521659 5521967 -83982586 + AluSx SINE Alu 1 308 -4 4423 131 68 30 chr17 5521967 5522136 -83982417 + LTR39 LTR ERV1 622 783 0 686 193 33 82 chr17 5522136 5522307 -83982246 - LTR37A LTR ERV1 -184 242 85 3184 123 35 0 chr17 5522323 5522785 -83981768 + MER1A DNA MER1_type 37 514 -15 1969 87 21 24 chr17 5522908 5523196 -83981357 - AluSc SINE Alu -14 295 9 897 169 38 0 chr17 5523220 5523380 -83981173 - FRAM SINE Alu 0 166 1 2368 57 0 10 chr17 5523909 5524208 -83980345 + AluSg SINE Alu 4 299 -11 2580 162 19 71 chr17 5524432 5524461 -83980092 + L1MB2 LINE L1 5446 5475 -696 222 37 0 0 chr17 5524461 5524488 -83980065 + (CA)n Simple_repeat Simple_repeat 2 28 0 2580 162 19 71 chr17 5524488 5524824 -83979729 + L1MB2 LINE L1 5475 5827 -344 2222 91 0 0 chr17 5524824 5525120 -83979433 + AluSx SINE Alu 1 296 -16 2580 162 19 71 chr17 5525120 5525243 -83979310 + L1MB2 LINE L1 5827 5901 -270 2272 96 0 0 chr17 5525243 5525536 -83979017 + AluSx SINE Alu 3 295 -17 2580 162 19 71 chr17 5525536 5525633 -83978920 + L1MB2 LINE L1 5901 6002 -169 22 70 0 0 chr17 5525692 5525735 -83978818 + AT_rich Low_complexity Low_complexity 1 43 0 1452 139 7 85 chr17 5525735 5525785 -83978768 + Tigger2 DNA MER2_type 2446 2498 -220 2107 88 12 34 chr17 5525785 5526105 -83978448 - AluSp SINE Alu 0 313 1 2029 133 3 0 chr17 5526105 5526406 -83978147 - AluSx SINE Alu -10 302 1 1452 139 7 85 chr17 5526406 5526649 -83977904 + Tigger2 DNA MER2_type 2496 2717 -1 194 200 160 20 chr17 5526667 5526717 -83977836 + L2 LINE L2 3024 3080 -233 697 239 133 70 chr17 5526717 5527007 -83977546 + L1MEc LINE L1 805 1140 -5256 2263 91 7 0 chr17 5527007 5527316 -83977237 + AluSp SINE Alu 1 311 -2 697 239 133 70 chr17 5527316 5527523 -83977030 + L1MEc LINE L1 1140 1333 -5063 2025 128 3 0 chr17 5527863 5528161 -83976392 + AluSx SINE Alu 1 299 -13 2352 87 3 0 chr17 5528218 5528529 -83976024 - AluSx SINE Alu 0 312 1 948 208 16 0 chr17 5528879 5529000 -83975553 + AluJo SINE Alu 1 127 -185 365 0 22 0 chr17 5529000 5529045 -83975508 + (CA)n Simple_repeat Simple_repeat 2 47 0 948 208 16 0 chr17 5529045 5529106 -83975447 + AluJo SINE Alu 127 186 -126 805 93 0 0 chr17 5529124 5529231 -83975322 - AluSq/x SINE Alu -202 111 5 2129 87 7 13 chr17 5529616 5529915 -83974638 + AluSg SINE Alu 5 301 -9 945 186 0 0 chr17 5529917 5530078 -83974475 + AluJb SINE Alu 136 296 -16 1701 179 0 3 chr17 5530084 5530380 -83974173 + AluJo SINE Alu 5 299 -13 466 315 55 0 chr17 5530449 5530595 -83973958 + L2 LINE L2 3159 3312 -1 2321 90 0 7 chr17 5531102 5531412 -83973141 - AluSx SINE Alu -3 309 2 674 173 17 12 chr17 5531534 5531707 -83972846 + CT-rich Low_complexity Low_complexity 5 178 0 615 163 10 0 chr17 5531745 5531843 -83972710 - AluJ/FLAM SINE Alu -212 100 2 1609 161 39 7 chr17 5532358 5532483 -83972070 + AluJo SINE Alu 3 123 -189 270 0 0 0 chr17 5532483 5532513 -83972040 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 1609 161 39 7 chr17 5532513 5532672 -83971881 + AluJo SINE Alu 123 296 -16 2167 198 24 67 chr17 5532680 5532795 -83971758 + LTR31 LTR ERV1 76 194 -425 2198 100 10 10 chr17 5532795 5533104 -83971449 + AluSq SINE Alu 1 309 -4 2167 198 24 67 chr17 5533104 5533490 -83971063 + LTR31 LTR ERV1 194 553 -66 2449 40 3 7 chr17 5533490 5533790 -83970763 + AluY SINE Alu 1 299 -12 2167 198 24 67 chr17 5533790 5533838 -83970715 + LTR31 LTR ERV1 553 602 -17 254 256 70 0 chr17 5534071 5534157 -83970396 + (CAGTG)n Simple_repeat Simple_repeat 4 95 0 1959 127 3 7 chr17 5534423 5534723 -83969830 - AluSx SINE Alu -8 304 6 2129 112 0 0 chr17 5535091 5535387 -83969166 - AluSc SINE Alu -13 296 1 2282 57 0 0 chr17 5535729 5536011 -83968542 + AluSq SINE Alu 25 306 -7 386 224 66 3 chr17 5536152 5536291 -83968262 - MIR SINE MIR -70 138 45 2043 109 0 0 chr17 5537393 5537701 -83966852 + AluSx SINE Alu 1 308 0 2117 108 17 0 chr17 5537724 5538020 -83966533 + AluSx SINE Alu 1 301 -11 280 252 49 119 chr17 5538359 5538455 -83966098 - MIR SINE MIR -110 152 51 2135 91 0 27 chr17 5538455 5538627 -83965926 - AluSx SINE Alu -12 300 125 228 35 0 0 chr17 5538627 5538656 -83965897 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2143 87 0 14 chr17 5538656 5538943 -83965610 - AluY SINE Alu -28 283 1 2135 91 0 27 chr17 5538943 5539067 -83965486 - AluSx SINE Alu -185 127 11 280 252 49 119 chr17 5539067 5539113 -83965440 - MIR SINE MIR -211 51 20 1224 125 0 0 chr17 5539164 5539340 -83965213 + AluSg/x SINE Alu 130 305 -5 2020 125 0 13 chr17 5539997 5540302 -83964251 - AluSx SINE Alu -11 301 1 560 306 151 39 chr17 5540380 5540871 -83963682 - L3 LINE CR1 -65 1512 967 2179 78 7 0 chr17 5540893 5541187 -83963366 - AluY SINE Alu -15 296 1 256 146 0 0 chr17 5541187 5541228 -83963325 - L1ME LINE L1 -342 5828 5788 1164 90 0 0 chr17 5541235 5541390 -83963163 - AluY SINE Alu -18 293 139 275 272 87 0 chr17 5541412 5541504 -83963049 - L1ME LINE L1 -402 5768 5669 265 210 51 53 chr17 5541578 5541672 -83962881 - L1ME LINE L1 -423 5698 5606 1877 102 58 10 chr17 5541876 5542171 -83962382 - AluSx SINE Alu -3 309 1 1001 241 86 80 chr17 5542405 5542484 -83962069 - MER115 DNA AcHobo -2 691 614 1989 125 3 13 chr17 5542484 5542795 -83961758 + AluSx SINE Alu 5 312 0 1001 241 86 80 chr17 5542795 5543101 -83961452 - MER115 DNA AcHobo -79 614 304 2052 86 14 4 chr17 5543199 5543494 -83961059 - AluSg1 SINE Alu 0 298 1 2905 37 3 0 chr17 5543502 5543851 -83960702 - L1PA8 LINE L1 -6 6166 5817 250 278 0 0 chr17 5543932 5543986 -83960567 - MER115 DNA AcHobo -484 209 156 2313 78 0 0 chr17 5544086 5544382 -83960171 + AluSg SINE Alu 1 296 -14 201 238 313 0 chr17 5544528 5544608 -83959945 + L2 LINE L2 3205 3309 -4 305 249 96 47 chr17 5544694 5544843 -83959710 - MIR3 SINE MIR -65 143 1 249 53 0 211 chr17 5544946 5545077 -83959476 + (TCCC)n Simple_repeat Simple_repeat 1 103 0 21 114 0 0 chr17 5545463 5545568 -83958985 + GC_rich Low_complexity Low_complexity 1 105 0 180 296 170 59 chr17 5545890 5546025 -83958528 + MIR3 SINE MIR 2 151 -57 1753 157 3 3 chr17 5547336 5547635 -83956918 - AluJb SINE Alu -13 299 1 22 0 0 0 chr17 5547841 5547863 -83956690 + AT_rich Low_complexity Low_complexity 1 22 0 793 155 31 0 chr17 5548172 5548301 -83956252 - FLAM_C SINE Alu 0 133 1 592 274 47 16 chr17 5548477 5548667 -83955886 - MIR SINE MIR -30 232 37 308 302 81 53 chr17 5548690 5549056 -83955497 - L1MC/D LINE L1 -321 5800 5466 2176 97 0 0 chr17 5549083 5549373 -83955180 + AluSg SINE Alu 1 290 -20 386 270 30 20 chr17 5549381 5549481 -83955072 - L2 LINE L2 -2 3270 3170 1501 250 54 44 chr17 5549537 5550199 -83954354 - L2 LINE L2 -4 3309 2655 2218 95 0 0 chr17 5550199 5550493 -83954060 + AluSx SINE Alu 14 307 -5 1501 250 54 44 chr17 5550493 5550507 -83954046 - L2 LINE L2 -658 2655 2643 1751 144 28 11 chr17 5550507 5550791 -83953762 + AluJb SINE Alu 4 292 -20 1501 250 54 44 chr17 5550791 5551004 -83953549 - L2 LINE L2 -670 2643 2410 196 311 33 0 chr17 5551036 5551097 -83953456 - L2 LINE L2 -215 3057 2995 201 316 0 0 chr17 5551192 5551249 -83953304 - L2 LINE L2 -540 2774 2718 2097 125 3 0 chr17 5551253 5551564 -83952989 - AluSx SINE Alu 0 312 1 1888 143 0 7 chr17 5551566 5551873 -83952680 - AluSx SINE Alu -5 307 3 196 148 0 37 chr17 5551952 5552006 -83952547 + (TTTC)n Simple_repeat Simple_repeat 2 53 0 194 91 30 0 chr17 5552031 5552064 -83952489 + CT-rich Low_complexity Low_complexity 3 36 0 310 247 134 16 chr17 5552088 5552304 -83952249 - L1MC/D LINE L1 -788 5358 5118 552 210 22 29 chr17 5552448 5552586 -83951967 - LTR41 LTR ERVL -43 730 594 2389 54 0 3 chr17 5552961 5553257 -83951296 - AluY SINE Alu -16 295 1 1338 200 3 10 chr17 5553464 5553754 -83950799 - AluSx SINE Alu -14 298 11 1959 122 0 10 chr17 5553999 5554293 -83950260 + AluSg SINE Alu 2 292 -18 25 51 0 0 chr17 5554317 5554356 -83950197 + AT_rich Low_complexity Low_complexity 1 39 0 270 296 145 48 chr17 5554370 5554495 -83950058 - L1ME4a LINE L1 -187 5934 5822 1750 138 18 7 chr17 5554495 5554778 -83949775 + AluSx SINE Alu 1 286 -26 270 296 145 48 chr17 5554778 5555129 -83949424 - L1ME4a LINE L1 -299 5822 5412 23 0 0 0 chr17 5555173 5555196 -83949357 + AT_rich Low_complexity Low_complexity 1 23 0 1895 139 17 0 chr17 5555251 5555553 -83949000 - AluSx SINE Alu -5 307 1 1408 194 20 17 chr17 5555553 5555846 -83948707 - AluJb SINE Alu -13 299 6 1985 117 10 24 chr17 5555877 5556175 -83948378 + AluSp SINE Alu 1 294 -19 1382 171 89 0 chr17 5556307 5556576 -83947977 - AluJb SINE Alu -19 293 1 22 56 0 0 chr17 5556835 5556871 -83947682 + AT_rich Low_complexity Low_complexity 1 36 0 355 234 0 0 chr17 5556953 5557017 -83947536 - MER2 DNA MER2_type 0 345 282 1597 124 54 0 chr17 5557021 5557280 -83947273 + AluSg SINE Alu 37 309 -1 999 143 0 0 chr17 5557287 5557448 -83947105 - MER2 DNA MER2_type -134 211 51 239 248 114 78 chr17 5557591 5557671 -83946882 - L1ME LINE L1 -219 5902 5826 2014 115 0 23 chr17 5557671 5557975 -83946578 + AluSx SINE Alu 1 297 -15 239 248 114 78 chr17 5557975 5558201 -83946352 - L1ME LINE L1 -295 5826 5585 329 265 82 18 chr17 5558428 5558598 -83945955 - HAL1b LINE L1 -1092 256 76 454 300 65 39 chr17 5558647 5558836 -83945717 - L1ME LINE L1 -2289 3857 3655 2085 112 10 0 chr17 5558836 5559132 -83945421 - AluSp SINE Alu -14 299 1 454 300 65 39 chr17 5559132 5559249 -83945304 - L1ME LINE L1 -2491 3655 3543 419 249 11 62 chr17 5559275 5559307 -83945246 - L1ME LINE L1 -327 5794 5762 1510 182 30 13 chr17 5559307 5559609 -83944944 - AluJb SINE Alu -5 307 1 419 249 11 62 chr17 5559609 5559753 -83944800 - L1ME LINE L1 -359 5762 5627 422 284 105 12 chr17 5560068 5560230 -83944323 + MIR SINE MIR 29 205 -57 474 189 277 14 chr17 5560267 5560415 -83944138 - MIR SINE MIR -71 191 5 298 182 268 71 chr17 5561179 5561228 -83943325 - L1MC5 LINE L1 -122 7839 7801 2465 50 0 0 chr17 5561228 5561526 -83943027 - AluY SINE Alu -13 298 1 298 182 268 71 chr17 5561526 5561674 -83942879 - L1MC5 LINE L1 -160 7801 7603 915 166 137 66 chr17 5561732 5561943 -83942610 - L1MC5 LINE L1 -1053 6908 6683 2232 97 0 0 chr17 5562291 5562599 -83941954 - AluSc SINE Alu -1 308 1 1570 180 80 43 chr17 5562771 5563144 -83941409 - L1MC3 LINE L1 -246 7539 7153 721 330 65 57 chr17 5563329 5563450 -83941103 - LTR67 LTR ERVL -9 548 429 806 184 107 6 chr17 5563450 5563618 -83940935 - MER5A DNA MER1_type -3 186 2 721 330 65 57 chr17 5563618 5564005 -83940548 - LTR67 LTR ERVL -128 429 36 180 345 0 0 chr17 5564261 5564319 -83940234 + L3 LINE CR1 563 620 -957 470 323 81 44 chr17 5564380 5564724 -83939829 + L3 LINE CR1 850 1206 -371 1944 138 0 0 chr17 5564816 5565113 -83939440 - AluSx SINE Alu -15 297 1 22 56 0 0 chr17 5565147 5565183 -83939370 + AT_rich Low_complexity Low_complexity 1 36 0 1038 168 16 0 chr17 5565215 5565400 -83939153 - AluJo SINE Alu -124 188 1 1664 188 0 0 chr17 5565804 5566114 -83938439 - AluSx SINE Alu 0 310 1 2232 102 0 3 chr17 5566324 5566628 -83937925 + AluSq SINE Alu 2 304 -9 2023 126 3 10 chr17 5566869 5567171 -83937382 + AluSq SINE Alu 1 300 -13 1023 152 92 0 chr17 5568625 5568809 -83935744 - Tigger5 DNA MER2_type -2 2321 2121 2260 98 0 0 chr17 5568917 5569213 -83935340 + AluSx SINE Alu 1 296 -16 390 112 10 71 chr17 5569402 5569500 -83935053 - Tigger5 DNA MER2_type -192 2131 2040 306 307 113 20 chr17 5569545 5569608 -83934945 - L1ME4a LINE L1 -2 6119 6063 2114 105 3 0 chr17 5569608 5569893 -83934660 + AluSx SINE Alu 1 286 -26 306 307 113 20 chr17 5569893 5569979 -83934574 - L1ME4a LINE L1 -58 6063 5956 2402 80 0 0 chr17 5570798 5571098 -83933455 - AluSx SINE Alu -12 300 1 187 280 13 40 chr17 5571766 5571841 -83932712 - L2 LINE L2 0 3272 3200 2241 86 3 16 chr17 5571940 5572253 -83932300 + AluSp SINE Alu 1 309 -4 571 211 12 62 chr17 5572376 5572537 -83932016 + MER5A DNA MER1_type 1 153 -36 464 255 235 7 chr17 5572550 5572703 -83931850 - MER5A DNA MER1_type -1 188 1 418 262 100 47 chr17 5572739 5572874 -83931679 - Charlie2 DNA MER1_type -40 2822 2696 1961 82 33 59 chr17 5572874 5573180 -83931373 - AluSg SINE Alu -12 298 1 418 262 100 47 chr17 5573180 5573365 -83931188 - Charlie2 DNA MER1_type -166 2696 2485 2225 103 0 0 chr17 5573372 5573674 -83930879 - AluSx SINE Alu -2 310 9 648 286 29 6 chr17 5573680 5573851 -83930702 - MER5A DNA MER1_type -14 175 1 25 0 0 0 chr17 5573915 5573940 -83930613 + AT_rich Low_complexity Low_complexity 1 25 0 2240 73 7 17 chr17 5574548 5574848 -83929705 - AluY SINE Alu -14 297 1 1534 116 151 12 chr17 5575210 5575469 -83929084 + AluSx SINE Alu 1 295 -17 329 276 32 8 chr17 5575534 5575657 -83928896 + L1ME3 LINE L1 6035 6160 -2 195 42 0 0 chr17 5575827 5575851 -83928702 + (CAGA)n Simple_repeat Simple_repeat 4 27 0 2209 80 3 23 chr17 5577065 5577365 -83927188 + AluSc SINE Alu 1 294 -15 500 268 95 6 chr17 5577380 5577548 -83927005 - MER5A DNA MER1_type 0 189 7 296 321 291 0 chr17 5578398 5578563 -83925990 + MIR SINE MIR 46 258 -4 1768 169 0 7 chr17 5578609 5578904 -83925649 + AluJo SINE Alu 6 298 -14 2271 85 10 10 chr17 5578910 5579216 -83925337 + AluSx SINE Alu 1 306 -6 222 309 52 41 chr17 5580896 5580993 -83923560 - L2 LINE L2 -14 3258 3161 393 302 18 62 chr17 5581476 5581658 -83922895 - L2 LINE L2 0 3313 3141 2041 76 6 111 chr17 5581658 5582001 -83922552 - AluSp SINE Alu -6 307 1 393 302 18 62 chr17 5582001 5582043 -83922510 - L2 LINE L2 -172 3141 3099 2080 154 0 0 chr17 5582105 5582417 -83922136 + AluJb SINE Alu 1 312 0 398 277 53 71 chr17 5582513 5582695 -83921858 + MIR SINE MIR 1 178 -30 2470 45 3 16 chr17 5582783 5583095 -83921458 + AluY SINE Alu 1 308 -3 2163 105 7 7 chr17 5583463 5583759 -83920794 - AluSx SINE Alu -11 301 6 1118 74 0 0 chr17 5583835 5583970 -83920583 + AluSg SINE Alu 1 135 -175 1957 94 80 0 chr17 5583970 5584245 -83920308 + AluSx SINE Alu 1 297 -15 2257 93 7 13 chr17 5584493 5584803 -83919750 + AluSx SINE Alu 4 311 -1 2326 83 3 6 chr17 5584803 5585116 -83919437 + AluSp SINE Alu 1 313 0 654 246 129 26 chr17 5585653 5585885 -83918668 - MIR SINE MIR -3 259 4 483 277 43 5 chr17 5589208 5589396 -83915157 + L1MC4a LINE L1 5362 5556 -2252 1328 81 0 0 chr17 5589401 5589573 -83914980 + AluY SINE Alu 126 297 -14 601 257 87 52 chr17 5589583 5589628 -83914925 + L1MC4a LINE L1 5555 5597 -537 2461 38 3 0 chr17 5589628 5589919 -83914634 - AluY SINE Alu -19 292 1 601 257 87 52 chr17 5589919 5590145 -83914408 + L1MC4a LINE L1 5597 5832 -302 1995 134 3 3 chr17 5590160 5590459 -83914094 + AluSx SINE Alu 1 299 -13 2302 86 3 0 chr17 5590578 5590879 -83913674 - AluY SINE Alu -9 302 1 2009 129 3 3 chr17 5590908 5591202 -83913351 + AluSg SINE Alu 1 294 -16 203 254 15 60 chr17 5592183 5592250 -83912303 - L2 LINE L2 -1 3312 3249 194 347 0 0 chr17 5592301 5592376 -83912177 + L2 LINE L2 2971 3045 -227 467 333 41 31 chr17 5593549 5593744 -83910809 - L3 LINE CR1 -7 1570 1374 2211 89 10 0 chr17 5593750 5594041 -83910512 + AluSx SINE Alu 1 294 -18 700 156 18 0 chr17 5594051 5594160 -83910393 + AluSq/x SINE Alu 1 111 -201 2193 96 3 0 chr17 5594170 5594461 -83910092 - AluSx SINE Alu -20 292 1 1478 92 0 0 chr17 5594463 5594658 -83909895 + AluSc SINE Alu 103 297 -12 528 325 211 12 chr17 5594658 5595264 -83909289 - L3 LINE CR1 -199 1378 652 2223 98 0 31 chr17 5597039 5597357 -83907196 + AluSx SINE Alu 1 308 -4 426 296 84 28 chr17 5598025 5598204 -83906349 - MIR SINE MIR -41 221 33 488 298 136 5 chr17 5598395 5598593 -83905960 - MIR SINE MIR -35 227 4 223 333 11 11 chr17 5598708 5598798 -83905755 - MIR3 SINE MIR -116 92 3 26 50 0 0 chr17 5602329 5602369 -83902184 + GC_rich Low_complexity Low_complexity 1 40 0 227 283 7 36 chr17 5602379 5602517 -83902036 + G-rich Low_complexity Low_complexity 1 134 0 2211 75 51 0 chr17 5603691 5603986 -83900567 - AluSx SINE Alu -2 310 1 1672 151 37 27 chr17 5603986 5604283 -83900270 - AluJb SINE Alu -11 301 1 2402 86 0 3 chr17 5604425 5604738 -83899815 - AluSp SINE Alu -1 312 1 831 152 0 23 chr17 5604741 5604873 -83899680 - AluJo/FLAM SINE Alu -173 129 1 2135 105 7 0 chr17 5605168 5605462 -83899091 - AluSx SINE Alu -16 296 1 2390 89 0 0 chr17 5605572 5605876 -83898677 - AluSg SINE Alu -6 304 1 605 271 90 0 chr17 5606124 5606312 -83898241 - L2 LINE L2 0 3313 3109 2389 89 0 0 chr17 5606314 5606618 -83897935 + AluSx SINE Alu 1 304 -8 2296 65 3 3 chr17 5606618 5606908 -83897645 + AluY SINE Alu 1 290 -21 2247 94 7 0 chr17 5606908 5607206 -83897347 + AluSp SINE Alu 1 300 -13 2231 107 0 0 chr17 5607206 5607506 -83897047 + AluSq SINE Alu 1 300 -13 874 220 0 0 chr17 5607512 5607671 -83896882 + FRAM SINE Alu 1 159 -17 191 105 53 0 chr17 5607685 5607723 -83896830 + GA-rich Low_complexity Low_complexity 1 40 0 288 77 0 0 chr17 5607730 5607769 -83896784 + (GGGGA)n Simple_repeat Simple_repeat 4 42 0 2049 123 10 7 chr17 5607802 5608104 -83896449 + AluJo SINE Alu 1 303 -9 467 240 34 17 chr17 5608176 5608355 -83896198 - L1MC5 LINE L1 -36 7925 7744 905 284 251 15 chr17 5608360 5608878 -83895675 - L2 LINE L2 -618 2696 2057 957 90 298 6 chr17 5609086 5609168 -83895385 - MER30 DNA MER1_type 0 230 173 2281 89 10 0 chr17 5609168 5609472 -83895081 + AluSq SINE Alu 1 307 -6 2288 76 0 16 chr17 5609482 5609786 -83894767 - AluSq SINE Alu -14 299 1 957 90 298 6 chr17 5609786 5609870 -83894683 - MER30 DNA MER1_type -63 167 1 2291 100 0 0 chr17 5614662 5614963 -83889590 + AluSx SINE Alu 1 301 -11 428 360 7 7 chr17 5615034 5615187 -83889366 - MIR SINE MIR -21 241 89 1250 88 0 0 chr17 5615190 5615349 -83889204 - AluSp SINE Alu -21 292 134 2245 87 7 0 chr17 5615349 5615647 -83888906 - AluSg SINE Alu -10 300 1 2284 68 0 0 chr17 5616137 5616443 -83888110 + AluY SINE Alu 2 307 0 2153 124 0 0 chr17 5616502 5616801 -83887752 + AluSx SINE Alu 1 299 -13 2319 71 3 10 chr17 5616803 5617100 -83887453 + AluSq SINE Alu 3 297 -16 216 163 0 0 chr17 5620439 5620482 -83884071 + C-rich Low_complexity Low_complexity 5 47 0 2448 68 10 0 chr17 5620848 5621157 -83883396 - AluSq SINE Alu -1 312 1 539 327 125 11 chr17 5621310 5621591 -83882962 + L3 LINE CR1 1191 1503 -74 334 299 0 11 chr17 5621616 5621703 -83882850 + L2 LINE L2 3187 3272 0 384 347 18 24 chr17 5622042 5622212 -83882341 + MIR3 SINE MIR 17 185 -23 1101 178 66 5 chr17 5622318 5622515 -83882038 - MER3 DNA MER1_type 0 209 1 2128 122 0 6 chr17 5623657 5623969 -83880584 - AluSx SINE Alu -2 310 1 266 243 66 44 chr17 5623998 5624080 -83880473 - L1ME4a LINE L1 0 6121 6033 2349 90 0 0 chr17 5624080 5624379 -83880174 + AluSx SINE Alu 1 299 -13 266 243 66 44 chr17 5624379 5624432 -83880121 - L1ME4a LINE L1 -88 6033 5983 302 383 82 27 chr17 5624912 5625168 -83879385 - L1M4c LINE L1 -5180 1204 935 1990 148 7 0 chr17 5628397 5628701 -83875852 + AluSx SINE Alu 1 306 -6 1520 171 45 21 chr17 5628741 5629027 -83875526 + AluJo SINE Alu 1 293 -19 333 269 48 58 chr17 5633951 5634055 -83870498 - MIR SINE MIR -156 106 4 1667 155 10 39 chr17 5634108 5634248 -83870305 + AluJb SINE Alu 1 144 -168 2175 64 0 0 chr17 5634248 5634559 -83869994 + AluSc SINE Alu 14 324 0 1667 155 10 39 chr17 5634559 5634726 -83869827 + AluJb SINE Alu 144 300 -12 290 276 69 26 chr17 5634755 5634871 -83869682 - L2 LINE L2 -25 3288 3168 215 214 36 0 chr17 5634973 5635029 -83869524 - L2 LINE L2 -289 2983 2926 2053 94 3 14 chr17 5635050 5635173 -83869380 + AluSx SINE Alu 14 137 -175 2322 87 0 10 chr17 5635173 5635483 -83869070 + AluSp SINE Alu 1 307 -6 2053 94 3 14 chr17 5635483 5635647 -83868906 + AluSx SINE Alu 137 298 -14 2535 52 0 0 chr17 5635725 5636030 -83868523 + AluY SINE Alu 1 305 -6 460 188 47 0 chr17 5636298 5636383 -83868170 - AluJ/FLAM SINE Alu -221 91 3 2446 79 0 0 chr17 5636629 5636934 -83867619 + AluSg SINE Alu 1 305 -5 187 286 0 0 chr17 5636952 5637001 -83867552 + L2 LINE L2 3190 3238 -75 1367 165 189 0 chr17 5637021 5637275 -83867278 - AluJo SINE Alu 0 302 1 798 229 40 63 chr17 5637321 5637544 -83867009 + AluJo SINE Alu 3 220 -92 338 90 5 5 chr17 5637551 5637742 -83866811 + AluSg SINE Alu 14 301 0 1139 164 5 55 chr17 5637750 5637969 -83866584 + AluJb SINE Alu 84 291 -21 2223 103 0 3 chr17 5637971 5638271 -83866282 + AluSx SINE Alu 1 299 -13 274 323 54 31 chr17 5638334 5638424 -83866129 + L2 LINE L2 3137 3223 -49 1759 118 56 59 chr17 5638424 5638597 -83865956 + MER44D DNA MER2_type 1 173 -2318 2335 76 0 32 chr17 5638597 5638912 -83865641 - AluY SINE Alu -6 305 1 2304 84 7 0 chr17 5638913 5639210 -83865343 - AluSq SINE Alu -14 299 1 1759 118 56 59 chr17 5639210 5639373 -83865180 + MER44D DNA MER2_type 172 608 -1 274 323 54 31 chr17 5639373 5639412 -83865141 + L2 LINE L2 3223 3269 -3 2194 111 0 3 chr17 5641294 5641600 -83862953 - AluSx SINE Alu -7 305 1 817 165 15 0 chr17 5641641 5641774 -83862779 + AluJo SINE Alu 1 135 -177 1593 150 27 60 chr17 5641774 5642074 -83862479 + AluJo SINE Alu 1 290 -22 738 310 15 5 chr17 5642078 5642278 -83862275 + MIR SINE MIR 19 220 -42 2498 58 3 3 chr17 5642293 5642602 -83861951 - AluSp SINE Alu -4 309 1 1122 148 0 0 chr17 5642830 5643006 -83861547 - FRAM SINE Alu -1 175 1 591 64 86 0 chr17 5644460 5644600 -83859953 + (CAGAGA)n Simple_repeat Simple_repeat 1 152 0 476 219 64 97 chr17 5645360 5645463 -83859090 + MIR SINE MIR 25 130 -132 2153 79 59 0 chr17 5645463 5645753 -83858800 - AluSg SINE Alu -3 307 1 476 219 64 97 chr17 5645753 5645866 -83858687 + MIR SINE MIR 130 235 -27 * 1055 194 38 13 chr17 5645860 5646097 -83858456 - MIR SINE MIR -1 261 19 230 250 107 0 chr17 5646831 5646915 -83857638 + L2 LINE L2 3175 3267 -5 1990 104 7 31 chr17 5647624 5647763 -83856790 + AluSx SINE Alu 1 142 -163 2276 32 72 0 chr17 5647763 5648042 -83856511 + AluY SINE Alu 1 299 -12 1990 104 7 31 chr17 5648042 5648214 -83856339 + AluSx SINE Alu 142 305 0 258 238 33 25 chr17 5650276 5650398 -83854155 + C-rich Low_complexity Low_complexity 2 124 0 23 78 0 0 chr17 5651373 5651424 -83853129 + GC_rich Low_complexity Low_complexity 1 51 0 22 56 0 0 chr17 5652374 5652410 -83852143 + GC_rich Low_complexity Low_complexity 1 36 0 193 303 131 7 chr17 5653851 5653996 -83850557 + MIR3 SINE MIR 25 187 -21 1524 187 11 0 chr17 5656369 5656647 -83847906 - AluJb SINE Alu -5 307 27 687 117 0 100 chr17 5656652 5656772 -83847781 - AluJb SINE Alu -204 108 1 1672 112 0 0 chr17 5658444 5658676 -83845877 - AluSg/x SINE Alu -5 307 76 229 62 0 0 chr17 5658676 5658708 -83845845 - Alu SINE Alu -268 32 1 400 263 76 35 chr17 5658763 5658934 -83845619 - MIR SINE MIR -17 245 68 248 286 0 16 chr17 5659161 5659224 -83845329 + GA-rich Low_complexity Low_complexity 4 65 0 1720 163 3 3 chr17 5664764 5665053 -83839500 - AluJb SINE Alu -23 289 1 2255 108 0 0 chr17 5665058 5665365 -83839188 - AluSx SINE Alu -5 307 1 337 313 43 0 chr17 5665371 5665534 -83839019 - L1ME4a LINE L1 -2 6119 5950 207 280 60 24 chr17 5666395 5666563 -83837990 + (TTGGGG)n Simple_repeat Simple_repeat 3 176 0 483 323 127 26 chr17 5668226 5668254 -83836299 + L2 LINE L2 1685 1709 -1605 2226 71 17 14 chr17 5668254 5668549 -83836004 + AluSp SINE Alu 1 296 -17 483 323 127 26 chr17 5668549 5668947 -83835606 + L2 LINE L2 1709 2154 -1160 1105 106 0 0 chr17 5668950 5669091 -83835462 - AluSq/x SINE Alu -170 142 2 852 295 70 48 chr17 5669092 5669594 -83834959 + L2 LINE L2 2152 2664 -650 1701 103 0 4 chr17 5669597 5669829 -83834724 - AluSg/x SINE Alu -1 309 79 1188 171 9 23 chr17 5669831 5670047 -83834506 - AluJo SINE Alu -41 271 59 2169 97 7 3 chr17 5670165 5670463 -83834090 + AluY SINE Alu 1 299 -12 1003 88 0 0 chr17 5670676 5670801 -83833752 + AluSq/x SINE Alu 1 125 -188 2268 109 3 0 chr17 5670805 5671108 -83833445 + AluSg SINE Alu 1 304 -6 715 281 55 44 chr17 5671110 5671675 -83832878 + L1M4 LINE L1 3422 3992 -2154 242 247 21 10 chr17 5671981 5672078 -83832475 + L1M4 LINE L1 4272 4369 -1777 1926 121 10 39 chr17 5673310 5673616 -83830937 - AluSq SINE Alu -16 297 1 780 143 0 0 chr17 5673802 5673914 -83830639 + FLAM_C SINE Alu 6 117 -26 26 0 0 0 chr17 5673921 5673947 -83830606 + AT_rich Low_complexity Low_complexity 1 26 0 29 0 0 0 chr17 5677946 5677975 -83826578 + AT_rich Low_complexity Low_complexity 1 29 0 635 251 15 41 chr17 5677976 5678171 -83826382 - LTR41 LTR ERVL -583 190 1 2462 107 8 8 chr17 5678415 5678770 -83825783 - THE1A LTR MaLR 0 355 1 12042 84 11 5 chr17 5678770 5680340 -83824213 - THE1A-int LTR MaLR 0 1580 1 2458 102 11 8 chr17 5680340 5680694 -83823859 - THE1A LTR MaLR 0 355 1 1162 239 15 23 chr17 5680797 5681060 -83823493 + MIR SINE MIR 2 262 0 845 138 23 0 chr17 5681135 5681265 -83823288 - FLAM_C SINE Alu 0 133 1 2529 61 0 3 chr17 5681996 5682293 -83822260 - AluY SINE Alu -15 296 1 2219 120 13 0 chr17 5682450 5682758 -83821795 + AluSx SINE Alu 1 312 0 1420 197 39 8 chr17 5682760 5683120 -83821433 + L1M4 LINE L1 4480 4850 -1296 2323 101 0 0 chr17 5683125 5683421 -83821132 - AluY SINE Alu -15 296 1 246 180 0 0 chr17 5683425 5683475 -83821078 + L1MA10 LINE L1 6285 6334 0 1756 88 0 0 chr17 5684792 5685009 -83819544 + AluSg/x SINE Alu 85 301 -11 192 313 127 45 chr17 5685130 5685264 -83819289 - L2 LINE L2 -218 3054 2910 293 265 102 48 chr17 5685607 5685773 -83818780 - HAL1 LINE L1 -8 2499 2325 1779 133 29 32 chr17 5685773 5686089 -83818464 - MER21A LTR ERV1 0 931 617 2218 120 0 3 chr17 5686090 5686389 -83818164 - AluSq SINE Alu -15 298 1 2254 118 0 0 chr17 5686389 5686685 -83817868 - AluSx SINE Alu -16 296 1 2158 105 22 0 chr17 5687113 5687426 -83817127 + AluSg SINE Alu 1 319 0 2365 74 0 10 chr17 5687427 5687725 -83816828 + AluY SINE Alu 1 295 -16 359 234 115 40 chr17 5687824 5687978 -83816575 - MIR SINE MIR -58 204 34 2255 110 0 23 chr17 5688014 5688323 -83816230 + AluSx SINE Alu 1 302 -10 354 248 248 18 chr17 5688661 5688774 -83815779 + MIR3 SINE MIR 49 187 -21 2393 99 0 0 chr17 5688899 5689201 -83815352 + AluSq SINE Alu 1 302 -11 2448 76 0 7 chr17 5689473 5689775 -83814778 + AluY SINE Alu 1 300 -11 2148 101 0 21 chr17 5689787 5690074 -83814479 + AluSq SINE Alu 2 282 -31 252 152 22 0 chr17 5690271 5690317 -83814236 - L2 LINE L2 -2 3270 3224 319 264 0 0 chr17 5690357 5690429 -83814124 + MIR SINE MIR 15 86 -176 2380 92 0 0 chr17 5690793 5691086 -83813467 - AluSx SINE Alu -16 296 4 2380 102 0 22 chr17 5691094 5691408 -83813145 - AluSg SINE Alu -3 307 1 813 133 0 113 chr17 5691415 5691565 -83812988 - FLAM_A SINE Alu 0 133 1 2121 190 74 88 chr17 5691754 5692220 -83812333 - MER77 LTR ERV1 0 605 134 2099 137 0 3 chr17 5692220 5692520 -83812033 - AluSx SINE Alu -13 299 1 2414 84 0 3 chr17 5692530 5692827 -83811726 - AluSg SINE Alu -14 296 1 2121 190 74 88 chr17 5692827 5692917 -83811636 - MER77 LTR ERV1 -480 125 46 735 140 61 0 chr17 5692950 5693064 -83811489 + FLAM_C SINE Alu 6 126 -17 2352 105 7 0 chr17 5693225 5693531 -83811022 + AluSx SINE Alu 1 308 -4 1928 160 0 0 chr17 5693539 5693833 -83810720 + AluJo SINE Alu 1 294 -18 5327 31 0 0 chr17 5693833 5694449 -83810104 + L1PA4 LINE L1 5536 6151 -4 264 30 0 0 chr17 5694449 5694482 -83810071 + (CA)n Simple_repeat Simple_repeat 2 34 0 1538 215 44 133 chr17 5694953 5695168 -83809385 - L1ME3A LINE L1 -5 6165 5933 2420 104 0 0 chr17 5695168 5695476 -83809077 - AluSg SINE Alu -1 309 2 1538 215 44 133 chr17 5695476 5695637 -83808916 - L1ME3A LINE L1 -237 5933 5864 1508 164 20 55 chr17 5695637 5695955 -83808598 - AluJo SINE Alu 0 308 1 1538 215 44 133 chr17 5695955 5696208 -83808345 - L1ME3A LINE L1 -306 5864 5590 2356 112 0 3 chr17 5696219 5696532 -83808021 - AluSx SINE Alu 0 312 1 2537 58 0 0 chr17 5697000 5697292 -83807261 - AluY SINE Alu -8 303 12 2392 88 0 0 chr17 5697292 5697587 -83806966 - AluY SINE Alu -16 295 1 844 209 90 101 chr17 5697597 5697975 -83806578 - MLT1A2 LTR MaLR 0 374 1 2092 145 0 3 chr17 5698002 5698298 -83806255 - AluSx SINE Alu -17 295 1 1687 162 75 0 chr17 5698326 5698604 -83805949 + AluJb SINE Alu 1 299 -13 600 298 70 83 chr17 5698760 5699133 -83805420 + L2 LINE L2 2946 3313 0 801 257 25 50 chr17 5699133 5699239 -83805314 - MIR SINE MIR 0 262 155 2531 73 0 0 chr17 5699239 5699542 -83805011 - AluY SINE Alu -8 303 1 801 257 25 50 chr17 5699542 5699676 -83804877 - MIR SINE MIR -107 155 28 2218 111 34 0 chr17 5699817 5700115 -83804438 - AluSx SINE Alu 0 312 5 1931 163 0 7 chr17 5700354 5700655 -83803898 - AluJo SINE Alu -13 299 1 204 201 152 28 chr17 5700704 5700822 -83803731 + MIR SINE MIR 11 159 -49 2037 74 4 0 chr17 5702499 5702771 -83801782 + AluSp SINE Alu 39 311 0 622 299 155 51 chr17 5702981 5703176 -83801377 + L2 LINE L2 2006 2179 -1093 2245 98 0 30 chr17 5703176 5703481 -83801072 - AluSx SINE Alu -16 296 1 622 299 155 51 chr17 5703481 5704089 -83800464 + L2 LINE L2 2179 2722 -550 2306 107 3 3 chr17 5704089 5704398 -83800155 + AluSg SINE Alu 1 309 -1 622 299 155 51 chr17 5704398 5704711 -83799842 + L2 LINE L2 2722 3266 -6 24 0 0 0 chr17 5704795 5704819 -83799734 + AT_rich Low_complexity Low_complexity 1 24 0 339 359 145 0 chr17 5704819 5704950 -83799603 + L2 LINE L2 3116 3265 -7 2251 102 13 3 chr17 5705206 5705509 -83799044 + AluSq SINE Alu 1 306 -7 2179 119 14 0 chr17 5705645 5705939 -83798614 + AluSx SINE Alu 1 298 -14 483 239 90 0 chr17 5706078 5706212 -83798341 - MLT1L LTR MaLR 0 615 470 402 209 181 60 chr17 5706239 5706343 -83798210 - MLT1L LTR MaLR -211 404 314 2237 92 46 0 chr17 5706343 5706627 -83797926 - AluSc SINE Alu -12 297 1 402 209 181 60 chr17 5706627 5706704 -83797849 - MLT1L LTR MaLR -301 314 201 1954 167 39 28 chr17 5706706 5706913 -83797640 - MLT1A1 LTR MaLR -1 364 150 1914 156 0 56 chr17 5706913 5707082 -83797471 - AluJo SINE Alu -9 303 159 2374 96 0 10 chr17 5707082 5707385 -83797168 - AluY SINE Alu -11 300 1 1914 156 0 56 chr17 5707385 5707536 -83797017 - AluJo SINE Alu -153 159 1 1954 167 39 28 chr17 5707536 5707688 -83796865 - MLT1A1 LTR MaLR -215 150 1 6782 195 65 42 chr17 5707688 5708845 -83795708 - MLT1A1-int LTR MaLR 0 1735 532 2207 126 3 0 chr17 5708845 5709154 -83795399 + AluSq SINE Alu 1 310 -3 6782 195 65 42 chr17 5709154 5709532 -83795021 - MLT1A1-int LTR MaLR -1203 532 164 423 115 16 0 chr17 5709632 5709693 -83794860 - AluS SINE Alu -255 63 2 2443 80 0 0 chr17 5709778 5710077 -83794476 + AluSg SINE Alu 1 299 -11 333 280 131 0 chr17 5710294 5710401 -83794152 + MIR3 SINE MIR 36 156 -52 227 283 17 0 chr17 5710683 5710743 -83793810 - L2 LINE L2 -273 3040 2980 184 282 91 36 chr17 5711170 5711280 -83793273 - L3 LINE CR1 -2 1575 1460 2215 121 3 10 chr17 5711466 5711780 -83792773 - AluSp SINE Alu 0 313 2 1045 224 92 7 chr17 5712105 5712386 -83792167 + MLT1D LTR MaLR 41 345 -160 1913 148 7 3 chr17 5712561 5712868 -83791685 - AluJo SINE Alu 0 308 1 446 238 61 37 chr17 5712934 5713098 -83791455 + MLT1H1 LTR MaLR 10 177 -413 725 96 0 0 chr17 5713101 5713195 -83791358 + AluSg1 SINE Alu 2 95 -214 776 215 37 19 chr17 5714393 5714607 -83789946 + LTR7 LTR ERV1 233 450 0 1553 94 5 0 chr17 5714607 5714810 -83789743 + AluSg1 SINE Alu 93 296 -16 711 261 92 38 chr17 5714813 5715181 -83789372 + MLT1H1 LTR MaLR 168 555 0 551 208 219 6 chr17 5715449 5715627 -83788926 + MLT1D LTR MaLR 290 505 0 2471 88 0 3 chr17 5715658 5715966 -83788587 - AluSx SINE Alu -5 307 1 3642 156 26 61 chr17 5716275 5716494 -83788059 + LTR62 LTR ERVK 1 226 -493 2475 103 0 0 chr17 5716494 5716804 -83787749 + AluSg SINE Alu 1 310 0 3642 156 26 61 chr17 5716804 5716871 -83787682 + LTR62 LTR ERVK 226 294 -425 2395 103 0 0 chr17 5716871 5717173 -83787380 + AluSp SINE Alu 1 302 -11 3642 156 26 61 chr17 5717173 5717628 -83786925 + LTR62 LTR ERVK 294 717 -2 741 170 7 21 chr17 5717837 5717978 -83786575 - AluY SINE Alu -22 289 151 260 150 0 0 chr17 5717978 5718018 -83786535 - Alu SINE Alu -268 40 1 248 188 12 47 chr17 5718020 5718105 -83786448 + L1MC4a LINE L1 5858 5939 -1869 2296 112 0 0 chr17 5718105 5718409 -83786144 + AluSq SINE Alu 1 304 -9 3992 185 43 21 chr17 5718465 5719134 -83785419 - L1MB7 LINE L1 0 6184 5531 2184 112 7 7 chr17 5719134 5719430 -83785123 - AluSq SINE Alu -17 296 1 3992 185 43 21 chr17 5719430 5719757 -83784796 - L1MB7 LINE L1 -653 5531 5212 2294 113 6 0 chr17 5719757 5720068 -83784485 - AluSp SINE Alu 0 313 1 3992 185 43 21 chr17 5720068 5720537 -83784016 - L1MB7 LINE L1 -972 5212 4683 346 125 0 0 chr17 5720543 5720591 -83783962 + Alu SINE Alu 1 48 -254 1326 114 11 0 chr17 5720697 5720872 -83783681 - AluSg SINE Alu -133 177 1 2049 122 30 7 chr17 5720935 5721230 -83783323 + AluSx SINE Alu 11 312 0 2159 105 7 13 chr17 5721232 5721537 -83783016 + AluSg SINE Alu 1 303 -7 286 330 0 0 chr17 5721544 5721635 -83782918 + L1ME LINE L1 5560 5650 -520 1784 173 77 0 chr17 5721641 5721954 -83782599 - MER1B DNA MER1_type 0 337 1 1671 167 10 20 chr17 5722020 5722320 -83782233 + AluJo SINE Alu 1 297 -15 1358 139 19 43 chr17 5722320 5722578 -83781975 - Charlie1b DNA MER1_type -213 310 59 230 312 19 8 chr17 5722603 5722707 -83781846 + L1PA8A LINE L1 5673 5772 -349 259 242 32 74 chr17 5722710 5722805 -83781748 + L2 LINE L2 3173 3263 -9 2362 98 0 13 chr17 5723029 5723344 -83781209 + AluSp SINE Alu 1 311 -2 2149 124 0 0 chr17 5723416 5723714 -83780839 + AluSx SINE Alu 3 300 -12 2197 119 3 3 chr17 5723715 5724025 -83780528 + AluSp SINE Alu 1 310 -3 3669 169 95 18 chr17 5724031 5724704 -83779849 + MER21B LTR ERV1 94 818 -45 2345 82 0 0 chr17 5724725 5725035 -83779518 + AluSc SINE Alu 1 310 0 1505 186 4 22 chr17 5725042 5725317 -83779236 + AluJo SINE Alu 1 270 -42 252 0 0 0 chr17 5725336 5725364 -83779189 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 1285 165 81 18 chr17 5725392 5725665 -83778888 + AluJo SINE Alu 13 302 -10 27 49 0 0 chr17 5725736 5725777 -83778776 + AT_rich Low_complexity Low_complexity 1 41 0 260 192 0 0 chr17 5725984 5726036 -83778517 - L2 LINE L2 0 3313 3262 1170 148 6 0 chr17 5726187 5726363 -83778190 - AluSg/x SINE Alu -2 310 134 1951 127 3 39 chr17 5726363 5726671 -83777882 - AluSx SINE Alu -15 297 1 1816 64 4 0 chr17 5726707 5726940 -83777613 - L1PA6 LINE L1 -2 6152 5919 2123 106 3 10 chr17 5727059 5727362 -83777191 - AluSx SINE Alu -11 301 1 501 291 0 47 chr17 5727821 5727993 -83776560 - MIR SINE MIR -96 166 3 1804 80 0 0 chr17 5728111 5728337 -83776216 + AluSg/x SINE Alu 72 297 -15 2108 190 107 34 chr17 5729320 5729846 -83774707 - LTR6A LTR ERV1 0 564 1 2159 106 7 7 chr17 5730163 5730456 -83774097 - AluSx SINE Alu -19 293 1 1588 163 69 7 chr17 5730723 5731000 -83773553 + AluJo SINE Alu 1 294 -18 1726 164 44 0 chr17 5731002 5731295 -83773258 + AluJb SINE Alu 1 306 -6 747 169 0 0 chr17 5731296 5731414 -83773139 + FLAM_C SINE Alu 1 118 -15 24 0 0 0 chr17 5731460 5731484 -83773069 + AT_rich Low_complexity Low_complexity 1 24 0 2563 61 0 0 chr17 5731495 5731792 -83772761 + AluY SINE Alu 1 297 -14 823 138 23 0 chr17 5732522 5732652 -83771901 + FLAM_C SINE Alu 1 133 0 1055 249 4 8 chr17 5732751 5732992 -83771561 - MIR SINE MIR -21 241 2 2419 104 11 8 chr17 5733095 5733449 -83771104 + THE1A LTR MaLR 1 355 0 11897 84 11 5 chr17 5733449 5735019 -83769534 + THE1A-int LTR MaLR 1 1580 0 2441 107 8 8 chr17 5735019 5735374 -83769179 + THE1A LTR MaLR 1 355 0 676 246 15 41 chr17 5735618 5735813 -83768740 + LTR41 LTR ERVL 1 190 -583 29 0 0 0 chr17 5735814 5735843 -83768710 + AT_rich Low_complexity Low_complexity 1 29 0 1386 217 64 31 chr17 5737012 5737079 -83767474 - Charlie2 DNA MER1_type -510 2352 2289 2133 108 10 20 chr17 5737079 5737385 -83767168 + AluSg SINE Alu 1 303 -7 1386 217 64 31 chr17 5737385 5737800 -83766753 - Charlie2 DNA MER1_type -573 2289 1854 2048 115 3 17 chr17 5737828 5738115 -83766438 - AluSx SINE Alu -29 283 1 2037 133 0 10 chr17 5738489 5738782 -83765771 + AluSx SINE Alu 1 290 -22 1703 104 0 0 chr17 5739896 5740126 -83764427 - AluSg/x SINE Alu -1 309 80 2560 57 0 0 chr17 5740185 5740482 -83764071 - AluY SINE Alu -14 297 1 436 269 133 50 chr17 5741024 5741234 -83763319 + HAL1 LINE L1 1156 1347 -1160 2287 111 0 7 chr17 5741234 5741540 -83763013 + AluSx SINE Alu 1 304 -8 436 269 133 50 chr17 5741540 5741787 -83762766 + HAL1 LINE L1 1347 1651 -856 2147 116 7 3 chr17 5741835 5742145 -83762408 + AluSx SINE Alu 1 311 -1 2246 125 0 0 chr17 5742217 5742522 -83762031 + AluSx SINE Alu 1 305 -7 1005 169 0 11 chr17 5742565 5742743 -83761810 - AluSg/x SINE Alu -9 301 126 1990 204 75 29 chr17 5742743 5743292 -83761261 + L1M4 LINE L1 3613 4186 -1960 204 40 0 0 chr17 5743292 5743317 -83761236 + (TA)n Simple_repeat Simple_repeat 2 26 0 3640 208 55 7 chr17 5743322 5744030 -83760523 + MER21B LTR ERV1 36 777 -86 235 132 0 0 chr17 5744031 5744069 -83760484 + L1MB8 LINE L1 6141 6178 0 1000 260 46 26 chr17 5744203 5744591 -83759962 + L1M4 LINE L1 3490 3862 -2284 682 151 0 0 chr17 5744591 5744710 -83759843 + L1MA6 LINE L1 6177 6295 -5 2267 101 10 3 chr17 5744715 5745023 -83759530 + AluSg SINE Alu 1 310 0 2090 106 24 10 chr17 5745036 5745328 -83759225 - AluSx SINE Alu -16 296 1 4686 207 50 45 chr17 5745328 5746694 -83757859 + L1MA4 LINE L1 2254 3612 -3953 1795 163 10 10 chr17 5746694 5746826 -83757727 + AluJb SINE Alu 1 132 -180 2012 149 0 3 chr17 5746826 5747127 -83757426 + AluJo SINE Alu 1 300 -12 1795 163 10 10 chr17 5747127 5747283 -83757270 + AluJb SINE Alu 131 289 -23 4686 207 50 45 chr17 5747283 5747445 -83757108 + L1MA4 LINE L1 3612 3772 -3793 1370 164 56 72 chr17 5747445 5747583 -83756970 + AluJo SINE Alu 1 140 -172 2238 99 0 3 chr17 5747583 5747875 -83756678 + AluSq SINE Alu 1 291 -22 1370 164 56 72 chr17 5747875 5748041 -83756512 + AluJo SINE Alu 140 300 -12 4686 207 50 45 chr17 5748041 5748278 -83756275 + L1MA4 LINE L1 3772 4037 -3528 6431 154 59 126 chr17 5748283 5748459 -83756094 + L1MA4 LINE L1 5141 5327 -2396 2118 138 3 3 chr17 5748459 5748771 -83755782 + AluSx SINE Alu 1 312 0 6431 154 59 126 chr17 5748771 5750678 -83753875 + L1MA4 LINE L1 5327 7085 -638 2012 104 3 83 chr17 5750678 5751004 -83753549 + AluSq SINE Alu 2 301 -12 1775 179 45 73 chr17 5751004 5751495 -83753058 + L1MA4 LINE L1 7242 7718 -1 464 206 37 0 chr17 5751490 5751597 -83752956 + L1MC1 LINE L1 5282 5392 -941 * 4447 179 33 7 chr17 5751604 5752460 -83752093 + L1MC1 LINE L1 5456 6333 0 1345 170 33 8 chr17 5752471 5752712 -83751841 - Tigger3(Golem) DNA MER2_type 0 3029 2783 2425 95 0 13 chr17 5752712 5753028 -83751525 + AluSx SINE Alu 1 312 0 585 252 22 0 chr17 5753060 5753195 -83751358 - Tigger3(Golem) DNA MER2_type -2890 139 2 2034 159 0 3 chr17 5754009 5754318 -83750235 + AluJb SINE Alu 1 308 -4 2120 75 65 0 chr17 5754318 5754596 -83749957 + AluSg SINE Alu 1 297 -13 353 242 80 93 chr17 5754606 5754895 -83749658 + L1MC5 LINE L1 7530 7814 -147 2328 78 3 3 chr17 5754895 5755189 -83749364 + AluSq SINE Alu 1 294 -19 353 242 80 93 chr17 5755189 5755287 -83749266 + L1MC5 LINE L1 7814 7912 -49 329 123 15 0 chr17 5755427 5755492 -83749061 + (TA)n Simple_repeat Simple_repeat 1 66 0 284 312 42 8 chr17 5756178 5756297 -83748256 - MIR SINE MIR -75 133 8 1862 153 3 3 chr17 5756387 5756669 -83747884 + AluJo SINE Alu 1 282 -30 243 0 0 0 chr17 5756674 5756701 -83747852 + (T)n Simple_repeat Simple_repeat 1 27 0 360 266 152 15 chr17 5756701 5757018 -83747535 + L1M3 LINE L1 5195 5545 -748 458 250 107 18 chr17 5757205 5757373 -83747180 - MIR SINE MIR -10 252 70 21 0 0 0 chr17 5757501 5757522 -83747031 + AT_rich Low_complexity Low_complexity 1 21 0 2284 86 3 35 chr17 5758243 5758556 -83745997 - AluSx SINE Alu -9 303 1 2367 90 0 0 chr17 5758809 5759108 -83745445 - AluY SINE Alu -12 299 1 461 299 41 28 chr17 5759251 5759473 -83745080 - MLT1J LTR MaLR -12 601 305 274 285 103 23 chr17 5759509 5759690 -83744863 - MLT1J LTR MaLR -287 159 2 1328 151 56 119 chr17 5759697 5759878 -83744675 - AluSx SINE Alu -13 299 145 2399 90 0 0 chr17 5759878 5760177 -83744376 - AluSx SINE Alu -12 300 2 1328 151 56 119 chr17 5760177 5760314 -83744239 - AluSx SINE Alu -167 145 1 388 299 162 5 chr17 5760480 5760684 -83743869 + MIR SINE MIR 6 241 -21 388 240 38 117 chr17 5761144 5761541 -83743012 + L2 LINE L2 2979 3310 -3 1815 156 16 13 chr17 5761910 5762267 -83742286 - L1MC3 LINE L1 -12 7983 7450 22 0 0 0 chr17 5763027 5763049 -83741504 + AT_rich Low_complexity Low_complexity 1 22 0 2451 57 0 27 chr17 5763050 5763350 -83741203 + AluY SINE Alu 1 292 -19 2191 92 7 26 chr17 5763927 5764231 -83740322 + AluSp SINE Alu 2 299 -14 1534 172 54 37 chr17 5764521 5764817 -83739736 + AluJo SINE Alu 1 301 -11 872 248 0 0 chr17 5765001 5765162 -83739391 + AluJb SINE Alu 129 289 -23 2280 95 0 16 chr17 5765164 5765468 -83739085 + AluSx SINE Alu 3 301 -11 376 270 110 19 chr17 5765471 5765789 -83738764 + L1M4 LINE L1 2270 2616 -3530 463 224 20 61 chr17 5765884 5766031 -83738522 + MIR SINE MIR 64 204 -58 225 279 15 0 chr17 5766041 5766109 -83738444 + MIR SINE MIR 167 235 -27 2497 83 0 3 chr17 5766311 5766625 -83737928 + AluSq SINE Alu 1 313 0 354 265 103 7 chr17 5766626 5766762 -83737791 + L1M4 LINE L1 3123 3271 -2875 751 192 48 12 chr17 5766765 5766932 -83737621 + AluJo SINE Alu 121 293 -19 294 277 188 66 chr17 5766932 5768002 -83736551 + L1M4 LINE L1 3306 4595 -1551 1542 132 123 8 chr17 5768002 5768253 -83736300 + AluSg1 SINE Alu 1 280 -29 294 277 188 66 chr17 5768253 5768615 -83735938 + L1M4 LINE L1 4595 4912 -1234 2056 112 32 0 chr17 5768624 5768909 -83735644 + AluSx SINE Alu 1 294 -18 483 154 13 0 chr17 5768919 5768997 -83735556 + AluJ/FLAM SINE Alu 2 80 -232 21 0 0 0 chr17 5769110 5769131 -83735422 + AT_rich Low_complexity Low_complexity 1 21 0 1627 168 14 3 chr17 5769168 5769454 -83735099 + AluSx SINE Alu 14 302 -10 1950 134 0 20 chr17 5769521 5769827 -83734726 - AluJo SINE Alu -12 300 1 2508 70 0 3 chr17 5769839 5770139 -83734414 - AluY SINE Alu -12 299 1 699 227 57 81 chr17 5770170 5770231 -83734322 - L1M4 LINE L1 -1455 4691 4630 1939 102 12 0 chr17 5770231 5770487 -83734066 + AluSp SINE Alu 37 295 -18 699 227 57 81 chr17 5770487 5770650 -83733903 - L1M4 LINE L1 -1516 4630 4465 2484 86 0 0 chr17 5770650 5770954 -83733599 - AluSc SINE Alu -4 305 2 2561 85 0 0 chr17 5770956 5771263 -83733290 - AluSq SINE Alu -6 307 1 699 227 57 81 chr17 5771263 5771369 -83733184 - L1M4 LINE L1 -1682 4464 4365 2524 62 0 10 chr17 5771372 5771676 -83732877 - AluY SINE Alu -10 301 1 1345 181 0 0 chr17 5771685 5771890 -83732663 - AluJb SINE Alu -23 289 85 2269 92 0 7 chr17 5771903 5772209 -83732344 - AluSx SINE Alu -8 304 1 2195 232 6 40 chr17 5772209 5772739 -83731814 - L1M4 LINE L1 -5697 845 334 476 239 26 0 chr17 5772743 5772860 -83731693 + L1M4 LINE L1 581 700 -5842 1021 133 0 0 chr17 5772885 5773035 -83731518 - AluSg/x SINE Alu -1 311 162 507 17 0 0 chr17 5773035 5773095 -83731458 - AluSp/q SINE Alu -16 297 238 1830 106 10 51 chr17 5773109 5773401 -83731152 - AluSx SINE Alu -32 280 1 2003 128 14 0 chr17 5773412 5773693 -83730860 - AluSx SINE Alu -7 305 21 837 178 51 0 chr17 5773777 5773934 -83730619 - MER20 DNA MER1_type -1 218 54 414 140 0 0 chr17 5773934 5773991 -83730562 + AluS SINE Alu 2 58 -260 180 0 0 0 chr17 5774007 5774027 -83730526 + (CAAA)n Simple_repeat Simple_repeat 2 21 0 2521 65 0 7 chr17 5774028 5774335 -83730218 + AluY SINE Alu 1 305 -6 395 250 48 16 chr17 5774407 5774531 -83730022 + L1MC4 LINE L1 7914 8041 -1 1247 278 224 49 chr17 5774563 5775052 -83729501 - L2 LINE L2 -1091 2223 1821 1646 164 114 0 chr17 5775052 5775332 -83729221 - AluJo SINE Alu 0 312 1 1247 278 224 49 chr17 5775332 5775389 -83729164 - L2 LINE L2 -1493 1821 1775 2121 118 7 0 chr17 5775389 5775678 -83728875 + AluSg SINE Alu 1 291 -19 1247 278 224 49 chr17 5775678 5776069 -83728484 - L2 LINE L2 -1539 1775 1121 1976 100 0 0 chr17 5776133 5776384 -83728169 - AluSg SINE Alu -6 304 54 643 295 104 39 chr17 5776458 5776814 -83727739 + LTR67 LTR ERVL 101 479 -78 2659 52 0 0 chr17 5776971 5777277 -83727276 - AluY SINE Alu -5 306 1 1694 181 56 3 chr17 5777521 5777809 -83726744 - AluJb SINE Alu -9 303 1 2290 92 27 0 chr17 5778673 5778966 -83725587 - AluSx SINE Alu -11 301 1 197 302 32 0 chr17 5778972 5779035 -83725518 - L2 LINE L2 -536 2778 2714 988 224 75 67 chr17 5779336 5779390 -83725163 + Charlie7 DNA MER1_type 284 336 -2276 2456 75 0 0 chr17 5779390 5779685 -83724868 - AluY SINE Alu -16 295 1 2259 85 0 7 chr17 5779688 5780004 -83724549 - AluSg SINE Alu 0 314 1 988 224 75 67 chr17 5780004 5780346 -83724207 + Charlie7 DNA MER1_type 337 688 -1924 2493 93 3 0 chr17 5780628 5780939 -83723614 - AluSp SINE Alu -1 312 1 2138 119 6 72 chr17 5781547 5781908 -83722645 - MER1B DNA MER1_type 0 337 1 2148 118 7 3 chr17 5784493 5784798 -83719755 - AluSc SINE Alu -1 308 3 2331 94 0 29 chr17 5784858 5785166 -83719387 - AluSx SINE Alu -13 299 1 1564 170 48 15 chr17 5785673 5785978 -83718575 - AluJo SINE Alu 0 319 6 207 276 51 71 chr17 5786929 5787027 -83717526 - MIR SINE MIR -5 257 162 460 165 52 0 chr17 5787063 5787160 -83717393 - Charlie1 DNA MER1_type -30 2731 2630 510 230 70 75 chr17 5787170 5787308 -83717245 - Charlie1 DNA MER1_type -2544 217 79 2149 132 0 19 chr17 5787308 5787626 -83716927 + AluJb SINE Alu 1 312 0 510 230 70 75 chr17 5787626 5787674 -83716879 - Charlie1 DNA MER1_type -2682 79 32 407 306 148 27 chr17 5787715 5787898 -83716655 - MIR SINE MIR -24 238 34 1784 154 44 17 chr17 5789246 5789539 -83715014 + AluJb SINE Alu 1 301 -11 186 244 89 67 chr17 5790211 5790301 -83714252 - L2 LINE L2 -2787 527 436 1384 152 0 0 chr17 5791429 5791667 -83712886 - AluJb SINE Alu 0 322 85 627 285 92 39 chr17 5791747 5792234 -83712319 - L1ME4a LINE L1 -1 6120 5608 2163 156 99 17 chr17 5793423 5793845 -83710708 + MSTB2 LTR MaLR 1 457 0 21 36 0 0 chr17 5794212 5794240 -83710313 + AT_rich Low_complexity Low_complexity 1 28 0 1512 180 11 18 chr17 5794602 5794905 -83709648 + AluSx SINE Alu 1 301 0 2158 115 14 0 chr17 5795036 5795322 -83709231 - AluSq SINE Alu -23 290 1 756 82 0 0 chr17 5796023 5796121 -83708432 - L1PA5 LINE L1 -3 6151 6054 2934 31 0 0 chr17 5796121 5796474 -83708079 + L1P2 LINE L1 5449 5801 -354 359 171 11 34 chr17 5796572 5796660 -83707893 + L1MA9 LINE L1 6222 6307 -5 1360 276 153 35 chr17 5796980 5797065 -83707488 + L2 LINE L2 316 390 -2924 2050 161 0 3 chr17 5797065 5797370 -83707183 - AluJb SINE Alu -4 308 5 1360 276 153 35 chr17 5797370 5797962 -83706591 + L2 LINE L2 390 1073 -2241 598 228 233 5 chr17 5798175 5798381 -83706172 + L2 LINE L2 1823 2075 -1239 405 0 0 0 chr17 5798382 5798427 -83706126 + (TC)n Simple_repeat Simple_repeat 2 46 0 26 50 0 0 chr17 5798439 5798479 -83706074 + GC_rich Low_complexity Low_complexity 1 40 0 262 239 31 25 chr17 5798618 5798777 -83705776 + (CCGCG)n Simple_repeat Simple_repeat 1 160 0 1167 281 93 21 chr17 5798938 5799508 -83705045 - HsTC2a DNA Tc2 0 744 134 204 40 0 0 chr17 5799724 5799749 -83704804 + (TTCA)n Simple_repeat Simple_repeat 4 28 0 769 192 13 0 chr17 5800242 5800398 -83704155 + MLT1B LTR MaLR 192 349 -41 236 162 0 0 chr17 5800441 5800478 -83704075 + MLT1B LTR MaLR 354 390 0 2206 77 6 45 chr17 5800537 5800849 -83703704 - AluSg SINE Alu -9 301 2 573 287 80 23 chr17 5800858 5801158 -83703395 + L1MC/D LINE L1 5479 5795 -2013 2041 129 0 17 chr17 5801170 5801465 -83703088 + AluJb SINE Alu 11 300 -12 2851 6 0 22 chr17 5801465 5801782 -83702771 + AluY SINE Alu 1 310 -1 2350 105 0 0 chr17 5801782 5802076 -83702477 + AluSp SINE Alu 1 294 -19 1267 135 0 0 chr17 5802076 5802254 -83702299 + AluSc SINE Alu 132 309 0 1223 145 0 0 chr17 5802754 5802926 -83701627 - AluJb SINE Alu -140 172 1 2342 73 7 17 chr17 5803558 5803858 -83700695 - AluY SINE Alu -14 297 1 2477 80 0 3 chr17 5804252 5804551 -83700002 + AluSc SINE Alu 1 298 -11 1725 182 30 0 chr17 5804632 5804929 -83699624 + AluJo SINE Alu 1 306 -6 2354 103 3 0 chr17 5805530 5805831 -83698722 - AluSp SINE Alu -11 302 1 262 300 56 0 chr17 5805866 5805956 -83698597 - MIR SINE MIR -70 192 98 189 301 126 75 chr17 5805986 5806225 -83698328 - L2 LINE L2 -18 3254 3004 1530 152 97 15 chr17 5806374 5806509 -83698044 + AluSq SINE Alu 1 124 -189 1425 150 49 95 chr17 5806509 5806835 -83697718 + AluSq SINE Alu 1 311 -2 1530 152 97 15 chr17 5806835 5806968 -83697585 + AluSq SINE Alu 124 291 -22 1976 144 6 13 chr17 5806978 5807291 -83697262 - AluSx SINE Alu -1 311 1 2155 91 63 0 chr17 5807568 5807854 -83696699 - AluSx SINE Alu -7 305 2 452 256 131 64 chr17 5808813 5808940 -83695613 - L2 LINE L2 -58 3255 3138 1826 139 49 7 chr17 5808940 5809227 -83695326 - AluJb SINE Alu -13 299 1 452 256 131 64 chr17 5809227 5809412 -83695141 - L2 LINE L2 -175 3138 2922 2076 136 7 3 chr17 5809529 5809831 -83694722 - AluJb SINE Alu -9 303 1 2033 143 17 0 chr17 5809948 5810241 -83694312 + AluSx SINE Alu 7 304 -8 2285 45 7 41 chr17 5810419 5810746 -83693807 + AluY SINE Alu 1 317 0 180 77 0 0 chr17 5811780 5811806 -83692747 + (CAG)n Simple_repeat Simple_repeat 3 28 0 605 265 92 5 chr17 5812024 5812209 -83692344 - MIR SINE MIR -3 259 59 2248 78 0 19 chr17 5812511 5812818 -83691735 - AluSc SINE Alu -8 301 1 2096 86 52 0 chr17 5812998 5813299 -83691254 - AluSx SINE Alu 0 315 1 268 347 116 0 chr17 5813366 5813487 -83691066 - L2 LINE L2 -1 3271 3137 257 237 340 0 chr17 5813495 5813592 -83690961 + L2 LINE L2 3141 3270 -2 1135 93 0 0 chr17 5813743 5813882 -83690671 + AluSg SINE Alu 1 139 -171 364 75 0 0 chr17 5813887 5813940 -83690613 + Alu SINE Alu 248 300 0 409 260 133 29 chr17 5814018 5814191 -83690362 - MIR SINE MIR -10 252 62 963 258 76 63 chr17 5816249 5816531 -83688022 + L2 LINE L2 2211 2503 -811 2467 93 0 0 chr17 5816531 5816843 -83687710 - AluSp SINE Alu -1 312 1 963 258 76 63 chr17 5816843 5817018 -83687535 + L2 LINE L2 2503 2674 -640 2339 107 0 13 chr17 5817059 5817376 -83687177 - AluSq SINE Alu 0 313 1 338 203 109 0 chr17 5817385 5817513 -83687040 - L1M4 LINE L1 -2191 3955 3814 1431 101 11 0 chr17 5817513 5817702 -83686851 - AluSg/x SINE Alu -13 299 109 344 23 0 0 chr17 5817702 5817745 -83686808 + AluSc SINE Alu 92 134 -165 740 231 64 0 chr17 5817745 5817901 -83686652 + AluJo/FRAM SINE Alu 137 302 0 2018 184 23 76 chr17 5817923 5818259 -83686294 + L1M4 LINE L1 3951 4246 -1900 1734 107 133 0 chr17 5818259 5818522 -83686031 + AluSg SINE Alu 1 298 -2 2018 184 23 76 chr17 5818522 5818754 -83685799 + L1M4 LINE L1 4246 4489 -1657 2230 110 10 0 chr17 5818754 5819054 -83685499 + AluSg SINE Alu 1 303 -7 269 23 0 70 chr17 5819068 5819111 -83685442 + (GAAAA)n Simple_repeat Simple_repeat 4 43 0 1580 166 25 31 chr17 5819112 5819267 -83685286 + L1M4 LINE L1 4741 4895 -1251 2413 62 10 20 chr17 5819267 5819573 -83684980 - AluY SINE Alu -7 304 2 1580 166 25 31 chr17 5819573 5819859 -83684694 + L1M4 LINE L1 4895 5308 -838 1870 98 0 8 chr17 5819860 5820105 -83684448 + AluSx SINE Alu 1 243 -69 2915 12 0 6 chr17 5820124 5820444 -83684109 + AluYb8 SINE Alu 1 318 0 793 151 22 29 chr17 5820449 5820588 -83683965 + FRAM SINE Alu 1 138 -38 1833 175 13 34 chr17 5820615 5821038 -83683515 + L1M4 LINE L1 5254 5667 -507 191 0 0 62 chr17 5821138 5821170 -83683383 + (TTTTG)n Simple_repeat Simple_repeat 1 180 0 670 71 24 0 chr17 5821170 5821255 -83683298 - AluSg/x SINE Alu -31 278 192 1907 62 0 4 chr17 5821174 5821415 -83683138 - AluSg SINE Alu -37 273 34 2244 93 0 3 chr17 5822508 5822809 -83681744 + AluSx SINE Alu 1 300 -12 1343 187 37 23 chr17 5824707 5824879 -83679674 - AluJo SINE Alu -8 304 125 2068 138 0 0 chr17 5824879 5825191 -83679362 - AluSx SINE Alu 0 312 1 1343 187 37 23 chr17 5825191 5825318 -83679235 - AluJo SINE Alu -187 125 1 888 187 22 39 chr17 5825319 5825331 -83679222 - L1MC1 LINE L1 0 6333 6322 1946 103 4 0 chr17 5825331 5825594 -83678959 - AluSp SINE Alu -12 301 38 2223 94 0 7 chr17 5825594 5825893 -83678660 - AluSx SINE Alu -15 297 1 888 187 22 39 chr17 5825893 5826061 -83678492 - L1MC1 LINE L1 -9 6324 6155 691 279 67 41 chr17 5826061 5826376 -83678177 + L2 LINE L2 2974 3296 -17 818 202 5 58 chr17 5827102 5827212 -83677341 + MER45A DNA AcHobo 1 98 -1483 2209 82 10 0 chr17 5827212 5827505 -83677048 - AluY SINE Alu -15 296 1 818 202 5 58 chr17 5827505 5827582 -83676971 + MER45A DNA AcHobo 98 178 0 413 245 9 107 chr17 5828323 5828400 -83676153 - MIR SINE MIR -17 245 162 2118 102 3 7 chr17 5828400 5828695 -83675858 - AluSx SINE Alu -18 294 1 413 245 9 107 chr17 5828695 5828851 -83675702 - MIR SINE MIR -100 162 34 2451 65 0 7 chr17 5828893 5829202 -83675351 - AluY SINE Alu -4 307 1 1969 135 0 0 chr17 5829202 5829498 -83675055 - AluSx SINE Alu -16 296 1 2414 77 0 0 chr17 5829669 5829980 -83674573 - AluY SINE Alu 0 311 1 1926 97 56 3 chr17 5830072 5830360 -83674193 - AluSc SINE Alu -6 303 1 292 342 13 13 chr17 5830366 5830383 -83674170 - L1MA10 LINE L1 0 6334 6318 913 212 8 54 chr17 5830383 5830624 -83673929 - L1ME2 LINE L1 -9 6155 5926 2131 70 35 3 chr17 5830625 5830910 -83673643 + AluSp SINE Alu 1 294 -19 1307 117 187 44 chr17 5830919 5831146 -83673407 + AluJb SINE Alu 1 275 -37 2399 60 0 7 chr17 5831146 5831448 -83673105 + AluY SINE Alu 1 300 -11 1307 117 187 44 chr17 5831448 5831493 -83673060 + AluJb SINE Alu 275 312 0 1325 223 72 5 chr17 5831495 5831913 -83672640 + L1ME2 LINE L1 5326 5771 -393 365 314 116 0 chr17 5831965 5832086 -83672467 + L2 LINE L2 3137 3271 -1 25 75 0 0 chr17 5832251 5832304 -83672249 + GC_rich Low_complexity Low_complexity 1 53 0 21 57 0 0 chr17 5832486 5832521 -83672032 + GC_rich Low_complexity Low_complexity 1 35 0 36 77 0 0 chr17 5832551 5832629 -83671924 + GC_rich Low_complexity Low_complexity 1 78 0 23 0 0 0 chr17 5833015 5833038 -83671515 + GC_rich Low_complexity Low_complexity 1 23 0 1690 157 48 0 chr17 5834176 5834470 -83670083 - AluJo SINE Alu -4 308 1 2230 99 0 0 chr17 5835839 5836142 -83668411 + AluSq SINE Alu 1 303 -10 2100 62 87 3 chr17 5836765 5837054 -83667499 - AluSq SINE Alu 0 313 1 1376 170 33 33 chr17 5837291 5837591 -83666962 - AluJb SINE Alu -12 300 1 1185 111 0 0 chr17 5837598 5837760 -83666793 - AluSq SINE Alu -18 295 134 2160 120 0 0 chr17 5837760 5838069 -83666484 - AluSc SINE Alu 0 309 1 731 256 0 55 chr17 5838069 5838268 -83666285 + L1ME2 LINE L1 5925 6112 -52 2064 128 0 0 chr17 5838461 5838473 -83666080 - AluSx SINE Alu -15 297 286 195 69 0 0 chr17 5838473 5838502 -83666051 + (GTTTG)n Simple_repeat Simple_repeat 2 30 0 2064 128 0 0 chr17 5838502 5838786 -83665767 - AluSx SINE Alu -25 287 1 387 267 125 114 chr17 5838895 5839066 -83665487 - L1ME2 LINE L1 -368 5753 5585 2019 109 4 0 chr17 5839066 5839341 -83665212 + AluSx SINE Alu 13 288 -24 387 267 125 114 chr17 5839341 5839665 -83664888 - L1ME2 LINE L1 -536 5585 5251 344 268 39 4 chr17 5840540 5840776 -83663777 + (TGGA)n Simple_repeat Simple_repeat 1 244 0 2166 104 0 3 chr17 5841576 5841875 -83662678 + AluSx SINE Alu 1 298 -14 2178 101 0 0 chr17 5842857 5843153 -83661400 + AluY SINE Alu 1 296 -15 2226 95 0 0 chr17 5843153 5843449 -83661104 + AluY SINE Alu 1 296 -15 1264 96 6 6 chr17 5845192 5845369 -83659184 + AluSq SINE Alu 1 177 -136 309 141 0 0 chr17 5845406 5845428 -83659125 + (A)n Simple_repeat Simple_repeat 1 22 -42 2268 75 10 0 chr17 5845428 5845720 -83658833 - AluSp SINE Alu -18 295 1 309 141 0 0 chr17 5845720 5845732 -83658821 + (A)n Simple_repeat Simple_repeat 22 33 -31 1995 101 40 0 chr17 5845732 5846033 -83658520 - AluSq SINE Alu 0 313 1 309 141 0 0 chr17 5846033 5846048 -83658505 + (A)n Simple_repeat Simple_repeat 33 47 -17 2412 49 7 3 chr17 5846048 5846352 -83658201 - AluY SINE Alu -6 305 1 309 141 0 0 chr17 5846352 5846364 -83658189 + (A)n Simple_repeat Simple_repeat 46 64 0 2425 62 7 0 chr17 5846372 5846678 -83657875 - AluY SINE Alu -3 308 1 29 0 0 0 chr17 5846748 5846777 -83657776 + AT_rich Low_complexity Low_complexity 1 29 0 1924 154 3 3 chr17 5846859 5847171 -83657382 - AluJb SINE Alu 0 312 1 1697 103 96 21 chr17 5847537 5847818 -83656735 + AluSq SINE Alu 1 302 -11 1236 111 0 0 chr17 5847819 5847990 -83656563 + AluSq SINE Alu 134 304 -9 382 305 59 32 chr17 5849257 5849444 -83655109 + MIR SINE MIR 13 204 -58 306 277 107 9 chr17 5849419 5849531 -83655022 - L2 LINE L2 0 3313 3191 * 945 148 17 126 chr17 5849536 5849593 -83654960 - MER3 DNA MER1_type -3 206 144 2232 96 3 19 chr17 5849593 5849768 -83654785 - AluSx SINE Alu -3 309 140 1911 96 74 0 chr17 5849768 5850039 -83654514 - AluSg SINE Alu -17 293 3 2232 96 3 19 chr17 5850039 5850177 -83654376 - AluSx SINE Alu -172 140 1 945 148 17 126 chr17 5850177 5850224 -83654329 - MER3 DNA MER1_type -65 144 93 2226 92 3 13 chr17 5850224 5850528 -83654025 + AluSx SINE Alu 1 301 -11 945 148 17 126 chr17 5850528 5850652 -83653901 - MER3 DNA MER1_type -116 93 2 1774 162 11 0 chr17 5850797 5851075 -83653478 - AluJo SINE Alu -31 281 1 2256 112 0 6 chr17 5851084 5851398 -83653155 - AluSx SINE Alu 0 312 1 679 153 90 0 chr17 5851431 5851542 -83653011 + FLAM_A SINE Alu 1 121 -12 948 174 31 0 chr17 5851608 5851769 -83652784 - AluJo/FRAM SINE Alu 0 302 137 1828 148 0 16 chr17 5851769 5852074 -83652479 - AluSg SINE Alu -10 300 1 2405 65 10 3 chr17 5852082 5852391 -83652162 - AluSp SINE Alu 0 313 3 2223 100 7 0 chr17 5852423 5852732 -83651821 + AluY SINE Alu 1 311 0 2195 108 0 0 chr17 5853188 5853493 -83651060 - AluSg SINE Alu -5 305 1 417 181 252 0 chr17 5853629 5853756 -83650797 - MIR SINE MIR -13 249 91 2207 106 0 0 chr17 5853852 5854153 -83650400 - AluSx SINE Alu -11 301 1 200 371 89 40 chr17 5854237 5854585 -83649968 - L2 LINE L2 -72 3200 2836 850 219 0 28 chr17 5854591 5854769 -83649784 + FRAM SINE Alu 2 174 -2 2310 102 0 3 chr17 5854822 5855135 -83649418 - AluSx SINE Alu 0 312 1 2140 98 10 0 chr17 5855142 5855437 -83649116 - AluSp SINE Alu -15 298 1 638 143 151 0 chr17 5855437 5855556 -83648997 - FLAM_C SINE Alu -5 138 2 2477 43 0 10 chr17 5855559 5855863 -83648690 - AluY SINE Alu -10 301 1 2277 82 0 7 chr17 5855863 5856167 -83648386 - AluSx SINE Alu -9 303 1 278 149 0 0 chr17 5856170 5856217 -83648336 - AluSq/x SINE Alu -169 133 87 2071 106 0 3 chr17 5856218 5856502 -83648051 + AluSq SINE Alu 1 283 -30 258 56 0 0 chr17 5856594 5856630 -83647923 + (A)n Simple_repeat Simple_repeat 1 36 0 300 111 0 0 chr17 5856633 5856678 -83647875 - AluSq/x SINE Alu -198 104 60 1650 166 0 11 chr17 5856678 5856956 -83647597 + AluJb SINE Alu 22 296 -16 2511 61 0 0 chr17 5856960 5857271 -83647282 + AluY SINE Alu 1 311 0 435 276 41 8 chr17 5857509 5857632 -83646921 - MIR3 SINE MIR -17 191 65 262 226 21 75 chr17 5858218 5858311 -83646242 + GA-rich Low_complexity Low_complexity 3 90 0 1972 111 7 0 chr17 5860520 5860823 -83643730 + AluSx SINE Alu 1 305 0 355 298 118 0 chr17 5861691 5861852 -83642701 + MIR SINE MIR 57 236 -26 661 277 43 77 chr17 5861888 5862069 -83642484 + L2 LINE L2 3021 3190 -123 2038 108 0 29 chr17 5862069 5862375 -83642178 + AluSx SINE Alu 1 297 -15 661 277 43 77 chr17 5862375 5862493 -83642060 + L2 LINE L2 3190 3310 -3 2425 61 0 0 chr17 5864119 5864416 -83640137 - AluY SINE Alu -14 297 1 414 0 0 0 chr17 5865113 5865159 -83639394 + (TG)n Simple_repeat Simple_repeat 1 46 0 316 95 0 0 chr17 5865228 5865270 -83639283 + MER4E LTR ERV1 651 692 -74 246 316 76 76 chr17 5867035 5867115 -83637438 + MER20B DNA MER1_type 4 83 -700 2437 34 3 10 chr17 5867115 5867411 -83637142 + AluY SINE Alu 3 296 -15 246 316 76 76 chr17 5867411 5867501 -83637052 + MER20B DNA MER1_type 82 174 -609 2323 93 0 3 chr17 5868368 5868681 -83635872 + AluSx SINE Alu 1 312 0 668 224 105 53 chr17 5868809 5869037 -83635516 - MIR SINE MIR 0 262 23 2291 98 7 0 chr17 5869168 5869474 -83635079 - AluSx SINE Alu -4 308 1 1219 163 26 13 chr17 5870015 5870242 -83634311 - L1MB3 LINE L1 -1 6182 5953 2042 102 3 24 chr17 5870812 5871107 -83633446 - AluSx SINE Alu -15 297 9 827 204 7 0 chr17 5871855 5872007 -83632546 - FRAM SINE Alu -23 153 1 324 0 0 0 chr17 5872404 5872440 -83632113 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 819 152 65 0 chr17 5872440 5872578 -83631975 - AluSq SINE Alu -32 281 135 715 187 16 0 chr17 5873073 5873196 -83631357 + FLAM_C SINE Alu 1 125 -18 180 200 0 0 chr17 5873208 5873248 -83631305 + GA-rich Low_complexity Low_complexity 1 40 0 354 206 109 11 chr17 5873443 5873535 -83631018 + MIR SINE MIR 24 124 -138 2422 52 0 0 chr17 5873546 5873833 -83630720 - AluY SINE Alu -24 287 1 935 96 0 22 chr17 5873836 5873972 -83630581 - AluSq SINE Alu -180 133 1 418 198 62 0 chr17 5873973 5874069 -83630484 + MIR SINE MIR 113 214 -48 182 219 178 112 chr17 5874626 5874747 -83629806 + L2 LINE L2 2879 3015 -257 2275 77 3 3 chr17 5874747 5875046 -83629507 - AluSp SINE Alu -14 299 1 182 219 178 112 chr17 5875046 5875093 -83629460 + L2 LINE L2 3015 3058 -214 540 170 0 0 chr17 5875111 5875205 -83629348 - AluJ/FRAM SINE Alu -3 309 216 435 293 60 20 chr17 5875262 5875412 -83629141 + L2 LINE L2 3117 3272 0 268 360 82 19 chr17 5875530 5875797 -83628756 - L3b LINE CR1 -196 1387 1104 2321 97 3 0 chr17 5876892 5877201 -83627352 + AluSx SINE Alu 1 310 -2 383 192 0 67 chr17 5877942 5878135 -83626418 + (TGGG)n Simple_repeat Simple_repeat 1 180 0 344 266 41 0 chr17 5878261 5878500 -83626053 + G-rich Low_complexity Low_complexity 1 248 0 296 204 58 29 chr17 5878504 5878676 -83625877 + (GTGTG)n Simple_repeat Simple_repeat 4 180 0 1791 106 4 34 chr17 5880108 5880373 -83624180 + AluSq SINE Alu 1 257 -56 2424 68 0 0 chr17 5880388 5880684 -83623869 + AluY SINE Alu 1 296 -15 2254 68 41 0 chr17 5880684 5880979 -83623574 + AluY SINE Alu 1 307 -4 1356 124 0 16 chr17 5880979 5881173 -83623380 + AluSq SINE Alu 108 298 -15 2105 123 0 3 chr17 5882642 5882951 -83621602 - AluSx SINE Alu -4 308 1 1510 107 0 30 chr17 5883641 5883874 -83620679 - AluSg/x SINE Alu 0 312 87 2257 83 0 0 chr17 5884713 5885001 -83619552 + AluSq SINE Alu 25 312 -1 2147 119 3 0 chr17 5886681 5886983 -83617570 - AluSx SINE Alu -9 303 1 849 178 33 75 chr17 5887382 5887556 -83616997 + MIR SINE MIR 23 188 -74 2321 83 3 0 chr17 5887556 5887856 -83616697 + AluSx SINE Alu 1 301 -11 849 178 33 75 chr17 5887856 5887895 -83616658 + MIR SINE MIR 188 227 -35 1761 179 3 10 chr17 5887938 5888240 -83616313 + AluJo SINE Alu 5 304 -8 517 302 148 0 chr17 5888759 5888961 -83615592 + MIR SINE MIR 27 258 -4 2220 81 3 0 chr17 5888964 5889272 -83615281 - AluSx SINE Alu 0 309 1 2337 81 3 0 chr17 5889301 5889598 -83614955 + AluSp SINE Alu 1 298 -15 2283 85 0 3 chr17 5889625 5889919 -83614634 + AluSq SINE Alu 1 293 -20 208 303 13 13 chr17 5890068 5890144 -83614409 + L2 LINE L2 3016 3091 -181 2273 66 0 10 chr17 5890332 5890646 -83613907 + AluSx SINE Alu 1 311 0 1732 136 13 46 chr17 5890786 5891088 -83613465 + AluJo SINE Alu 1 292 -20 327 344 26 20 chr17 5891159 5891310 -83613243 + L2 LINE L2 3150 3301 -12 2295 86 0 3 chr17 5891369 5891670 -83612883 + AluSc SINE Alu 1 300 -9 182 296 155 0 chr17 5891670 5891741 -83612812 - MIR SINE MIR -116 146 65 1049 204 13 22 chr17 5891741 5891972 -83612581 + AluJo SINE Alu 71 299 -13 2120 75 4 4 chr17 5891978 5892290 -83612263 + AluY SINE Alu 4 315 0 933 141 0 0 chr17 5892322 5892464 -83612089 - AluJb SINE Alu -3 309 168 820 176 8 0 chr17 5892551 5892682 -83611871 + FLAM_C SINE Alu 1 132 -1 1964 118 6 38 chr17 5892701 5893015 -83611538 + AluSx SINE Alu 1 304 -8 2551 173 63 23 chr17 5893015 5893153 -83611400 - L1MA4 LINE L1 -12 6288 6157 2171 127 0 0 chr17 5893153 5893460 -83611093 - AluSx SINE Alu -5 307 1 2551 173 63 23 chr17 5893460 5893921 -83610632 - L1MA4 LINE L1 -143 6157 5665 1099 168 0 22 chr17 5893921 5894100 -83610453 - AluJb SINE Alu -4 308 134 198 0 0 0 chr17 5894100 5894122 -83610431 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2185 81 0 3 chr17 5894122 5894407 -83610146 - AluY SINE Alu -27 284 1 1699 148 10 30 chr17 5894410 5894759 -83609794 - AluJb SINE Alu 0 312 2 987 144 0 0 chr17 5894759 5894932 -83609621 - L1MA4 LINE L1 -634 5666 5494 313 128 0 169 chr17 5894933 5895085 -83609468 - Alu SINE Alu 0 302 236 2286 84 0 16 chr17 5895085 5895394 -83609159 - AluY SINE Alu -7 304 1 189 0 0 0 chr17 5895396 5895417 -83609136 + (T)n Simple_repeat Simple_repeat 1 21 0 804 140 0 44 chr17 5895424 5895560 -83608993 - AluJb SINE Alu -182 130 1 443 99 33 0 chr17 5895560 5895651 -83608902 - L1MA4 LINE L1 -812 5488 5395 3762 152 18 47 chr17 5895658 5895725 -83608828 - L1MB7 LINE L1 0 6184 6117 2112 137 0 6 chr17 5895725 5896038 -83608515 + AluJb SINE Alu 1 311 -1 3762 152 18 47 chr17 5896038 5896358 -83608195 - L1MB7 LINE L1 -67 6117 5825 1574 170 0 74 chr17 5896358 5896694 -83607859 - AluJo SINE Alu -1 311 1 3762 152 18 47 chr17 5896694 5897035 -83607518 - L1MB7 LINE L1 -359 5825 5476 720 155 0 0 chr17 5897054 5897157 -83607396 - FRAM SINE Alu -37 139 37 481 95 0 0 chr17 5897157 5897231 -83607322 + L1M4 LINE L1 5415 5488 -690 2022 128 7 3 chr17 5897231 5897529 -83607024 + AluSx SINE Alu 1 299 -13 848 142 8 0 chr17 5897539 5897673 -83606880 + AluJ SINE Alu 1 135 -177 2172 99 14 3 chr17 5897673 5897966 -83606587 + AluSg SINE Alu 1 296 -14 2061 141 0 3 chr17 5898789 5899102 -83605451 - AluSx SINE Alu 0 312 1 241 294 76 22 chr17 5899122 5899214 -83605339 - MIR3 SINE MIR -52 156 60 184 311 54 27 chr17 5900336 5900410 -83604143 + MIR3 SINE MIR 110 185 -23 829 216 6 0 chr17 5900508 5900670 -83603883 + AluJ SINE Alu 134 296 -16 2132 111 7 0 chr17 5900673 5900970 -83603583 + AluSp SINE Alu 1 299 -14 2074 128 0 0 chr17 5900979 5901277 -83603276 - AluY SINE Alu -13 298 1 1906 151 7 3 chr17 5901991 5902290 -83602263 + AluJo SINE Alu 4 303 -9 365 345 14 20 chr17 5902767 5902915 -83601638 - MIR SINE MIR 0 262 116 2589 43 0 0 chr17 5902989 5903292 -83601261 - AluY SINE Alu -8 303 1 2053 107 40 3 chr17 5905470 5905769 -83598784 - AluSx SINE Alu -2 310 1 2348 58 0 3 chr17 5905800 5906092 -83598461 + AluY SINE Alu 1 291 -20 1140 259 22 13 chr17 5907762 5908021 -83596532 - MER58B DNA MER1_type -2079 341 77 2325 95 0 0 chr17 5908021 5908325 -83596228 + AluSx SINE Alu 1 304 -8 1140 259 22 13 chr17 5908325 5908378 -83596175 - MER58B DNA MER1_type -2343 77 26 2292 87 0 3 chr17 5908388 5908686 -83595867 - AluSg SINE Alu -13 297 1 2203 87 0 31 chr17 5908699 5909020 -83595533 - AluY SINE Alu 0 311 1 928 95 0 29 chr17 5909212 5909349 -83595204 - AluSq/x SINE Alu -180 133 1 246 32 0 0 chr17 5912853 5912884 -83591669 + (CAG)n Simple_repeat Simple_repeat 1 31 0 2116 85 0 0 chr17 5913139 5913410 -83591143 + AluSx SINE Alu 24 294 -18 1988 113 23 17 chr17 5913535 5913837 -83590716 + AluSg SINE Alu 1 304 -6 2267 71 3 22 chr17 5913871 5914182 -83590371 - AluSp SINE Alu -8 305 1 271 295 0 0 chr17 5914826 5914931 -83589622 + (CAG)n Simple_repeat Simple_repeat 1 105 0 330 301 9 44 chr17 5914965 5915224 -83589329 + CT-rich Low_complexity Low_complexity 1 249 0 275 293 20 14 chr17 5915255 5915402 -83589151 + CT-rich Low_complexity Low_complexity 1 148 0 309 100 0 0 chr17 5915788 5915838 -83588715 + (CAG)n Simple_repeat Simple_repeat 3 52 0 297 75 0 0 chr17 5916368 5916408 -83588145 + (CA)n Simple_repeat Simple_repeat 2 41 0 321 309 118 22 chr17 5917138 5917274 -83587279 + MIR SINE MIR 40 188 -74 321 341 40 8 chr17 5919983 5920109 -83584444 - MIR SINE MIR -59 149 20 21 0 0 0 chr17 5924342 5924363 -83580190 + GC_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr17 5924493 5924533 -83580020 + GC_rich Low_complexity Low_complexity 1 40 0 2316 76 0 7 chr17 5929051 5929339 -83575214 - AluSc SINE Alu -23 286 1 1002 159 0 69 chr17 5929355 5929544 -83575009 - FRAM SINE Alu 0 176 1 440 218 61 75 chr17 5929546 5929693 -83574860 - MER5A DNA MER1_type 0 189 45 217 217 43 0 chr17 5929951 5929997 -83574556 - MIR SINE MIR -92 170 123 1764 133 13 53 chr17 5930449 5930750 -83573803 + AluJo SINE Alu 1 289 -23 2403 88 0 3 chr17 5930760 5931057 -83573496 + AluSx SINE Alu 1 296 -16 731 119 0 0 chr17 5931673 5931791 -83572762 + L1M LINE L1 5296 5413 -889 588 146 0 39 chr17 5931793 5931896 -83572657 + FLAM_A SINE Alu 40 138 -4 364 179 13 0 chr17 5931906 5931984 -83572569 + AluSp/q SINE Alu 225 303 0 2905 88 21 0 chr17 5931987 5932417 -83572136 + L1MA1 LINE L1 5755 6193 -109 2533 45 3 16 chr17 5932464 5932773 -83571780 + AluY SINE Alu 1 305 -6 992 133 0 0 chr17 5932942 5933077 -83571476 + AluSq/x SINE Alu 1 135 -178 2021 112 24 7 chr17 5933077 5933373 -83571180 + AluSg SINE Alu 1 301 -9 887 131 0 5 chr17 5933860 5934265 -83570288 + (CA)n Simple_repeat Simple_repeat 1 402 0 2061 93 29 0 chr17 5934551 5934831 -83569722 - AluSx SINE Alu -11 301 14 251 149 27 54 chr17 5934952 5935026 -83569527 + MLT1K LTR MaLR 188 259 -329 2623 44 0 0 chr17 5935329 5935627 -83568926 + AluY SINE Alu 5 302 -9 1036 154 5 53 chr17 5935627 5935815 -83568738 + AluSg/x SINE Alu 132 310 0 872 183 0 0 chr17 5935829 5935971 -83568582 + FLAM_C SINE Alu 1 142 -1 681 92 0 0 chr17 5935995 5936082 -83568471 + AluS SINE Alu 2 88 -225 188 143 24 0 chr17 5936524 5936566 -83567987 + GA-rich Low_complexity Low_complexity 5 47 0 2345 106 3 0 chr17 5936722 5937033 -83567520 + AluSx SINE Alu 1 312 0 2463 88 3 0 chr17 5937361 5937667 -83566886 + AluSx SINE Alu 1 307 -5 1284 174 9 30 chr17 5937679 5937909 -83566644 - AluJo SINE Alu -46 266 42 2144 103 16 19 chr17 5938019 5938329 -83566224 - AluSc SINE Alu 0 309 1 2078 115 61 0 chr17 5938344 5938639 -83565914 - AluSp SINE Alu 0 313 1 674 129 48 40 chr17 5938679 5938803 -83565750 + AluJo SINE Alu 11 135 -177 2188 113 27 0 chr17 5938832 5939125 -83565428 + AluSx SINE Alu 1 301 -11 183 407 50 29 chr17 5939260 5939400 -83565153 - L2 LINE L2 -92 3180 3038 1666 179 18 4 chr17 5939684 5939994 -83564559 - AluJb SINE Alu 0 314 1 2161 117 3 0 chr17 5940006 5940321 -83564232 - AluSx SINE Alu 0 316 1 1899 145 0 26 chr17 5940324 5940634 -83563919 - AluSx SINE Alu -10 302 1 254 216 39 0 chr17 5940649 5940700 -83563853 - MER66B LTR ERV1 -143 343 291 2738 203 71 50 chr17 5940734 5940776 -83563777 + L1MC4 LINE L1 7181 7221 -821 2233 81 7 42 chr17 5940776 5941084 -83563469 + AluSq SINE Alu 1 297 -16 2738 203 71 50 chr17 5941084 5941884 -83562669 + L1MC4 LINE L1 7221 8041 -1 1634 180 13 28 chr17 5941956 5942273 -83562280 - AluJb SINE Alu 0 312 1 279 275 72 14 chr17 5942293 5942431 -83562122 + L1ME LINE L1 5727 5872 -298 1682 148 35 4 chr17 5942433 5942689 -83561864 + AluSx SINE Alu 1 264 -48 1417 161 17 25 chr17 5943134 5943203 -83561350 + AluJo SINE Alu 52 120 -196 2314 101 0 0 chr17 5943203 5943500 -83561053 - AluSq SINE Alu -16 297 1 1417 161 17 25 chr17 5943500 5943697 -83560856 + AluJo SINE Alu 120 316 0 2158 113 3 0 chr17 5943884 5944202 -83560351 + AluSx SINE Alu 1 319 0 2236 85 41 10 chr17 5944266 5944560 -83559993 + AluSq SINE Alu 3 305 -8 246 304 43 0 chr17 5944564 5944725 -83559828 + L1M4 LINE L1 2271 2438 -3708 1465 222 96 36 chr17 5944728 5945202 -83559351 + MLT1D LTR MaLR 1 423 -5 483 326 34 6 chr17 5945204 5945379 -83559174 + L1M4 LINE L1 2435 2614 -3532 1667 173 61 0 chr17 5945457 5945735 -83558818 + AluJb SINE Alu 1 295 -17 967 129 58 7 chr17 5945772 5945927 -83558626 + AluJb SINE Alu 114 276 -36 1495 167 24 45 chr17 5945927 5945948 -83558605 - MLT2D LTR ERVL -25 389 369 183 100 0 0 chr17 5945948 5945978 -83558575 + (CA)n Simple_repeat Simple_repeat 2 31 0 1495 167 24 45 chr17 5945978 5946291 -83558262 - MLT2D LTR ERVL -45 369 62 1094 177 21 0 chr17 5946311 5946497 -83558056 - AluSg/x SINE Alu -1 311 122 497 142 19 47 chr17 5946497 5946603 -83557950 - L1MDa LINE L1 -6437 103 1 541 143 0 0 chr17 5946610 5946701 -83557852 - FLAM_A SINE Alu -2 140 50 453 93 0 53 chr17 5946763 5946838 -83557715 + MLT2C2 LTR ERVL 1 71 -393 2058 143 20 0 chr17 5946838 5947138 -83557415 + AluSx SINE Alu 1 306 -6 958 115 0 8 chr17 5947146 5947276 -83557277 + AluSq/x SINE Alu 1 129 -183 2399 97 7 0 chr17 5947277 5947587 -83556966 + AluSx SINE Alu 1 312 0 1223 150 0 0 chr17 5947644 5947824 -83556729 - AluSq SINE Alu 0 313 134 1532 159 29 84 chr17 5947824 5947981 -83556572 - AluJo SINE Alu -10 302 169 2620 52 0 13 chr17 5947981 5948288 -83556265 + AluY SINE Alu 1 303 -8 1532 159 29 84 chr17 5948288 5948439 -83556114 - AluJo SINE Alu -143 169 11 1964 177 7 49 chr17 5948464 5948589 -83555964 - L1PB4 LINE L1 0 6156 6027 2236 95 27 0 chr17 5948589 5948883 -83555670 - AluSx SINE Alu -10 302 1 1964 177 7 49 chr17 5948883 5949163 -83555390 - L1PB4 LINE L1 -129 6027 5768 2428 91 0 0 chr17 5949172 5949468 -83555085 - AluSx SINE Alu -16 296 1 881 171 0 38 chr17 5949479 5949637 -83554916 - FRAM SINE Alu -24 152 1 246 103 0 0 chr17 5949639 5949678 -83554875 - L1M2 LINE L1 -520 5780 5742 2348 90 3 3 chr17 5950105 5950404 -83554149 - AluSc SINE Alu -9 300 2 2989 9 0 0 chr17 5950422 5950740 -83553813 - AluYb8 SINE Alu 0 318 1 1913 136 3 53 chr17 5950772 5951144 -83553409 + AluJb SINE Alu 5 360 0 2254 76 9 54 chr17 5951167 5951483 -83553070 + AluSx SINE Alu 1 302 -10 4739 96 0 85 chr17 5951799 5952244 -83552309 - LTR8 LTR ERV1 -1 690 334 2389 85 7 0 chr17 5952244 5952551 -83552002 - AluSx SINE Alu -1 311 3 4739 96 0 85 chr17 5952551 5952859 -83551694 - LTR8 LTR ERV1 -357 334 1 875 167 0 0 chr17 5952887 5953025 -83551528 - AluJb SINE Alu -6 306 169 1603 163 4 4 chr17 5953025 5953271 -83551282 + AluJb SINE Alu 40 285 -27 2636 40 0 10 chr17 5953338 5953640 -83550913 - AluY SINE Alu -12 299 1 245 272 98 80 chr17 5953641 5953865 -83550688 + L1M4 LINE L1 3526 3753 -2393 2025 117 4 0 chr17 5953865 5954138 -83550415 + AluSp SINE Alu 1 274 -39 1221 124 119 0 chr17 5954139 5954341 -83550212 + AluSc SINE Alu 71 296 -13 227 271 0 21 chr17 5954664 5954712 -83549841 - L2 LINE L2 -196 3076 3030 1361 111 0 0 chr17 5955599 5955771 -83548782 + AluSq SINE Alu 1 172 -141 231 323 10 10 chr17 5955935 5956034 -83548519 + L1MC4a LINE L1 5755 5853 -1955 862 134 0 0 chr17 5956049 5956168 -83548385 - AluSp/q SINE Alu -19 294 176 1022 138 0 7 chr17 5956168 5956320 -83548233 - AluSg/x SINE Alu -8 304 154 274 143 0 0 chr17 5956320 5956362 -83548191 - Alu SINE Alu -266 42 1 270 191 12 36 chr17 5956364 5956448 -83548105 + L1MC4a LINE L1 5858 5939 -1869 1739 113 0 0 chr17 5956448 5956679 -83547874 + AluSx SINE Alu 1 231 -81 1495 141 0 0 chr17 5956780 5956993 -83547560 + AluSg/x SINE Alu 100 312 0 333 257 37 37 chr17 5957038 5957147 -83547406 + MIR SINE MIR 154 262 0 1871 148 16 29 chr17 5957268 5957578 -83546975 + AluSx SINE Alu 1 306 -6 2128 104 0 11 chr17 5957638 5957949 -83546604 + AluSx SINE Alu 1 308 0 915 91 0 0 chr17 5957972 5958082 -83546471 + AluSq/x SINE Alu 1 110 -202 452 240 70 75 chr17 5958183 5958334 -83546219 + L1ME LINE L1 5133 5284 -862 1797 149 67 0 chr17 5958334 5958602 -83545951 + AluSx SINE Alu 1 286 -26 452 240 70 75 chr17 5958602 5958650 -83545903 + L1ME LINE L1 5284 5331 -815 2551 71 0 0 chr17 5958651 5958962 -83545591 + AluY SINE Alu 1 311 0 1107 119 0 36 chr17 5958980 5959148 -83545405 + AluSg/x SINE Alu 144 305 -5 327 282 77 72 chr17 5959150 5959345 -83545208 + L1ME LINE L1 5325 5462 -700 825 183 0 0 chr17 5960225 5960362 -83544191 - FLAM_C SINE Alu -4 139 3 368 318 72 26 chr17 5960502 5960697 -83543856 + L1MC/D LINE L1 5372 5575 -2233 29 28 0 0 chr17 5960797 5960833 -83543720 + AT_rich Low_complexity Low_complexity 1 36 0 2046 138 0 0 chr17 5961288 5961614 -83542939 + AluSx SINE Alu 1 326 0 2320 92 3 7 chr17 5962147 5962439 -83542114 - AluSp SINE Alu -22 291 1 189 418 0 0 chr17 5962444 5962535 -83542018 - L2 LINE L2 -226 3046 2956 2389 84 7 7 chr17 5962712 5963021 -83541532 - AluY SINE Alu -2 309 1 1670 158 21 0 chr17 5963032 5963323 -83541230 - L1MB7 LINE L1 -6 6178 5882 189 366 117 24 chr17 5963325 5963623 -83540930 - L2 LINE L2 -568 2746 2421 297 213 98 41 chr17 5963887 5964009 -83540544 - MER103 DNA DNA -2 164 36 2643 44 0 0 chr17 5964259 5964555 -83539998 + AluY SINE Alu 1 296 -15 1326 79 129 10 chr17 5965102 5965304 -83539249 - MER30 DNA MER1_type 0 230 5 28 61 0 0 chr17 5965434 5965483 -83539070 + AT_rich Low_complexity Low_complexity 1 49 0 1829 162 3 24 chr17 5965674 5965970 -83538583 + AluJb SINE Alu 1 290 -22 311 298 53 7 chr17 5966043 5966194 -83538359 - L1ME LINE L1 -331 5790 5633 364 105 0 0 chr17 5966430 5966487 -83538066 + Alu SINE Alu 244 300 -2 375 187 60 84 chr17 5966529 5966695 -83537858 - MIR SINE MIR -9 253 92 185 347 92 52 chr17 5966738 5967064 -83537489 + L2 LINE L2 2820 3158 -114 814 171 0 0 chr17 5967208 5967337 -83537216 + AluJo/FLAM SINE Alu 5 133 -179 1751 171 10 14 chr17 5967340 5967632 -83536921 + AluJb SINE Alu 1 291 -21 436 316 37 18 chr17 5968656 5968874 -83535679 + L2 LINE L2 2596 2817 -497 1280 168 10 10 chr17 5969796 5970004 -83534549 + AluSg/x SINE Alu 87 294 -18 363 216 88 24 chr17 5970115 5970240 -83534313 - L1ME4a LINE L1 -27 6094 5962 1455 117 47 0 chr17 5970284 5970497 -83534056 - AluJb SINE Alu -5 307 85 2308 88 7 10 chr17 5970520 5970814 -83533739 - AluSg SINE Alu -17 293 1 339 251 53 37 chr17 5970815 5971002 -83533551 - L1ME4a LINE L1 -179 5942 5753 2045 129 10 0 chr17 5971015 5971309 -83533244 - AluSx SINE Alu -15 297 1 1148 204 40 42 chr17 5971363 5971716 -83532837 - MER74A LTR ERVL -63 495 144 1257 196 116 7 chr17 5972276 5972552 -83532001 - L1MB5 LINE L1 -1 6173 5868 374 297 254 20 chr17 5972552 5972601 -83531952 + L2 LINE L2 1963 1999 -1315 2299 61 0 0 chr17 5972601 5972896 -83531657 + AluY SINE Alu 1 295 -16 374 297 254 20 chr17 5972896 5973189 -83531364 + L2 LINE L2 1999 2385 -929 287 360 61 20 chr17 5973258 5973405 -83531148 + L2 LINE L2 3116 3268 -4 283 298 46 14 chr17 5974563 5974709 -83529844 - MIR SINE MIR -50 212 65 1973 124 10 0 chr17 5975533 5975840 -83528713 - AluSg SINE Alu 0 310 1 216 333 90 17 chr17 5976512 5976689 -83527864 - L2 LINE L2 -245 3027 2838 1824 79 86 11 chr17 5976772 5977052 -83527501 + AluSx SINE Alu 1 301 -11 25 0 0 0 chr17 5977380 5977405 -83527148 + AT_rich Low_complexity Low_complexity 1 25 0 2325 222 100 39 chr17 5977861 5978713 -83525840 - L1ME3A LINE L1 0 6170 5267 2048 127 0 0 chr17 5978769 5979068 -83525485 - AluSx SINE Alu -13 299 1 243 0 0 0 chr17 5979293 5979320 -83525233 + (CA)n Simple_repeat Simple_repeat 2 28 0 2063 73 4 4 chr17 5979345 5979617 -83524936 - AluSg SINE Alu -38 272 1 2023 97 7 29 chr17 5979796 5980105 -83524448 - AluSq SINE Alu -11 302 1 1745 103 0 8 chr17 5980919 5981172 -83523381 + AluSg SINE Alu 45 295 -15 2267 91 7 0 chr17 5981740 5982047 -83522506 - AluSp SINE Alu -4 309 1 206 167 0 24 chr17 5982255 5982297 -83522256 + (TATG)n Simple_repeat Simple_repeat 4 44 0 958 262 121 32 chr17 5982308 5982811 -83521742 - L1MC4 LINE L1 -142 7900 7353 829 234 172 39 chr17 5982813 5983004 -83521549 - L1MC4a LINE L1 -1377 6431 6267 2406 62 0 0 chr17 5983004 5983312 -83521241 - AluY SINE Alu -1 310 3 829 234 172 39 chr17 5983312 5983585 -83520968 - L1MC4a LINE L1 -1541 6267 5905 502 291 21 121 chr17 5983704 5983993 -83520560 + L2 LINE L2 2996 3255 -17 1046 76 0 0 chr17 5984211 5984342 -83520211 + AluSg SINE Alu 1 131 -179 786 262 50 57 chr17 5984472 5984754 -83519799 - MLT2F LTR ERVL -367 296 17 1221 192 28 0 chr17 5984857 5985112 -83519441 + L1MD3 LINE L1 7734 7995 0 927 85 4 2 chr17 5985296 5985553 -83519000 + AluSq SINE Alu 1 313 0 2173 105 0 13 chr17 5986282 5986595 -83517958 + AluSx SINE Alu 1 309 -3 182 342 0 51 chr17 5987368 5987447 -83517106 + L3b LINE CR1 1433 1507 -76 261 0 0 0 chr17 5987670 5987699 -83516854 + (TC)n Simple_repeat Simple_repeat 1 29 0 * 369 62 0 0 chr17 5987698 5987746 -83516807 + (CA)n Simple_repeat Simple_repeat 1 48 0 385 323 37 25 chr17 5987755 5987916 -83516637 + MIR SINE MIR 97 259 -3 297 256 136 48 chr17 5987964 5988089 -83516464 - MIR SINE MIR -74 188 53 217 167 0 30 chr17 5988796 5988862 -83515691 + GA-rich Low_complexity Low_complexity 2 65 0 263 226 17 52 chr17 5988871 5988986 -83515567 + (CAGAGA)n Simple_repeat Simple_repeat 6 116 0 531 273 14 7 chr17 5989068 5989207 -83515346 - MIR SINE MIR 0 262 123 748 258 220 18 chr17 5989413 5989754 -83514799 + L2 LINE L2 2904 3313 0 1174 301 46 26 chr17 5990027 5990442 -83514111 + LTR16A LTR ERVL 21 443 -7 577 303 12 47 chr17 5990468 5990722 -83513831 - L3 LINE CR1 -163 1414 1170 315 267 48 38 chr17 5991916 5992021 -83512532 - L2 LINE L2 -12 3260 3155 475 266 57 0 chr17 5992188 5992312 -83512241 + Charlie8 DNA MER1_type 92 222 -2195 304 309 0 94 chr17 5992405 5992554 -83511999 - L2 LINE L2 -238 3034 2900 2156 114 3 7 chr17 5992675 5992983 -83511570 + AluSx SINE Alu 5 311 -1 2098 220 50 45 chr17 5993107 5993643 -83510910 - MLT1G1 LTR MaLR -5 590 52 1496 178 23 33 chr17 5993646 5994134 -83510419 + AluJo SINE Alu 1 485 0 1128 71 0 33 chr17 5993950 5994178 -83510375 + (GAAA)n Simple_repeat Simple_repeat 3 224 0 1166 290 6 9 chr17 5994204 5994525 -83510028 - L2 LINE L2 -1018 2296 1977 195 296 26 70 chr17 5994539 5994654 -83509899 - L2 LINE L2 -563 2751 2642 2188 88 0 0 chr17 5995131 5995425 -83509128 + AluY SINE Alu 1 294 -17 214 239 226 9 chr17 5996103 5996260 -83508293 + MIR SINE MIR 35 262 0 808 236 106 22 chr17 5996499 5996946 -83507607 - LTR33A LTR ERVL 0 523 2 503 301 162 27 chr17 5997467 5997832 -83506721 + L2 LINE L2 2900 3313 0 222 265 0 0 chr17 5997832 5997900 -83506653 + (TAGA)n Simple_repeat Simple_repeat 2 69 0 230 336 35 0 chr17 5997914 5998027 -83506526 + (TGGA)n Simple_repeat Simple_repeat 1 117 0 299 227 10 0 chr17 5998034 5998131 -83506422 + (TGGG)n Simple_repeat Simple_repeat 2 99 0 1306 224 33 15 chr17 5998559 5998889 -83505664 + MLT2C1 LTR ERVL 1 336 -61 374 119 0 15 chr17 5998893 5998960 -83505593 + (CATATA)n Simple_repeat Simple_repeat 6 71 0 234 277 67 118 chr17 5999586 5999781 -83504772 - L2 LINE L2 -93 3179 2995 665 316 14 19 chr17 5999808 6000017 -83504536 - MIR SINE MIR -18 244 37 1723 175 3 0 chr17 6000046 6000331 -83504222 - AluJb SINE Alu -26 286 1 22 35 0 0 chr17 6000556 6000585 -83503968 + AT_rich Low_complexity Low_complexity 1 29 0 547 190 28 28 chr17 6000677 6000819 -83503734 + MER96B DNA MER1_type? 192 333 -84 418 330 19 39 chr17 6000897 6001103 -83503450 - L2 LINE L2 -433 2881 2680 2175 122 39 28 chr17 6001274 6001636 -83502917 + THE1C LTR MaLR 8 373 -2 2332 163 18 50 chr17 6002043 6002545 -83502008 + L1ME2 LINE L1 5677 6162 -2 1016 156 28 69 chr17 6002658 6002876 -83501677 + MER3 DNA MER1_type 1 209 0 263 369 63 0 chr17 6003091 6003202 -83501351 - HAL1 LINE L1 -1635 872 755 492 309 114 61 chr17 6003334 6003774 -83500779 - HAL1 LINE L1 -2044 463 1 369 290 30 38 chr17 6005407 6005538 -83499015 - MLT1J LTR MaLR -152 359 230 2200 98 0 0 chr17 6005538 6005835 -83498718 + AluY SINE Alu 1 297 -14 467 235 115 68 chr17 6005862 6006096 -83498457 - MLT1J LTR MaLR -257 254 10 213 389 0 8 chr17 6007724 6007850 -83496703 + (CA)n Simple_repeat Simple_repeat 1 125 0 2120 103 0 3 chr17 6008109 6008401 -83496152 + AluSx SINE Alu 1 291 -21 2065 166 133 33 chr17 6008445 6008903 -83495650 - MLT1D LTR MaLR -1 504 1 2086 111 13 0 chr17 6009018 6009325 -83495228 - AluSx SINE Alu -1 311 1 763 244 29 6 chr17 6009332 6009504 -83495049 + MIR SINE MIR 48 223 -39 251 273 55 9 chr17 6009859 6009969 -83494584 - MLT1G1-int LTR MaLR -1618 117 3 360 204 48 39 chr17 6009971 6010074 -83494479 - MLT1G1 LTR MaLR 0 549 446 461 274 0 0 chr17 6010207 6010309 -83494244 + MIR SINE MIR 45 146 -62 1874 125 36 0 chr17 6010311 6010592 -83493961 + AluJo SINE Alu 2 292 -20 736 262 4 42 chr17 6010971 6011208 -83493345 - MLT2F LTR ERVL 0 663 436 2905 195 84 14 chr17 6011222 6011317 -83493236 - MER63C DNA MER1_type -143 917 830 1748 134 42 18 chr17 6011317 6011601 -83492952 + AluSx SINE Alu 1 291 -21 2905 195 84 14 chr17 6011601 6012126 -83492427 - MER63C DNA MER1_type -230 830 254 1417 263 36 39 chr17 6012167 6012578 -83491975 - MLT2F LTR ERVL -237 426 17 254 193 0 53 chr17 6012661 6012718 -83491835 - MLT2F LTR ERVL -593 70 17 1264 249 75 48 chr17 6014421 6014803 -83489750 - MLT1G1 LTR MaLR -210 341 1 1882 156 10 0 chr17 6015074 6015369 -83489184 + AluSx SINE Alu 1 298 -14 1266 213 39 110 chr17 6015494 6015986 -83488567 - MLT2B1 LTR ERVL -62 458 2 275 277 116 18 chr17 6016244 6016356 -83488197 - L2 LINE L2 -18 3254 3132 2167 105 3 10 chr17 6016736 6017156 -83487397 - AluSx SINE Alu 0 418 1 565 272 52 28 chr17 6017223 6017401 -83487152 - MIR SINE MIR -33 229 44 2002 146 26 19 chr17 6017401 6017778 -83486775 - L1MA4 LINE L1 -6 6294 5915 565 272 52 28 chr17 6017778 6017812 -83486741 - MIR SINE MIR -218 44 12 791 142 80 40 chr17 6018292 6018468 -83486085 + MER96B DNA MER1_type? 1 183 -234 195 42 0 0 chr17 6018608 6018632 -83485921 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2145 103 0 3 chr17 6018668 6018970 -83485583 - AluSg SINE Alu -9 301 1 29 28 0 0 chr17 6019060 6019096 -83485457 + AT_rich Low_complexity Low_complexity 1 36 0 1570 295 108 49 chr17 6019136 6019332 -83485221 - L1M4c LINE L1 -2005 4141 3958 2486 24 3 3 chr17 6019332 6019626 -83484927 - AluY SINE Alu -17 294 1 1570 295 108 49 chr17 6019626 6020121 -83484432 - L1M4c LINE L1 -2188 3958 3493 2245 109 0 3 chr17 6020121 6020432 -83484121 - AluSx SINE Alu -2 310 1 1570 295 108 49 chr17 6020432 6021385 -83483168 - L1M4c LINE L1 -2653 3493 2400 2407 76 0 0 chr17 6021624 6021928 -83482625 - AluSg SINE Alu -6 304 1 21 95 0 0 chr17 6022078 6022141 -83482412 + AT_rich Low_complexity Low_complexity 1 63 0 280 211 7 145 chr17 6022471 6022557 -83481996 - L1M4c LINE L1 -781 1647 1551 189 0 0 0 chr17 6022557 6022578 -83481975 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 1673 184 7 0 chr17 6022581 6022869 -83481684 - AluJb SINE Alu -22 290 1 280 211 7 145 chr17 6022869 6022930 -83481623 - L1M4c LINE L1 -879 1549 483 369 195 37 43 chr17 6023131 6023295 -83481258 + A-rich Low_complexity Low_complexity 2 164 0 235 173 15 68 chr17 6023457 6023590 -83480963 + (TAA)n Simple_repeat Simple_repeat 1 126 0 208 266 16 43 chr17 6023594 6023778 -83480775 + (TAGA)n Simple_repeat Simple_repeat 2 180 0 * 291 134 60 67 chr17 6023677 6023811 -83480742 + (AATAG)n Simple_repeat Simple_repeat 5 137 0 364 305 83 50 chr17 6023835 6024137 -83480416 + L1MEd LINE L1 808 1119 -5000 413 294 16 16 chr17 6025001 6025127 -83479426 - FLAM_A SINE Alu -6 127 2 374 87 5 103 chr17 6025319 6025514 -83479039 + (TGGGGG)n Simple_repeat Simple_repeat 2 177 0 * 436 33 50 83 chr17 6025475 6025656 -83478897 + (GTGTG)n Simple_repeat Simple_repeat 4 178 0 357 96 60 42 chr17 6025681 6025848 -83478705 + (GGGTG)n Simple_repeat Simple_repeat 5 174 0 567 98 12 49 chr17 6025911 6026074 -83478479 + (TGGG)n Simple_repeat Simple_repeat 1 157 0 375 239 0 0 chr17 6026078 6026195 -83478358 + G-rich Low_complexity Low_complexity 1 117 0 2217 265 37 23 chr17 6026614 6027471 -83477082 - L1M4 LINE L1 -2147 3999 3131 1214 157 113 47 chr17 6029188 6029532 -83475021 + L1MB3 LINE L1 5816 6182 -1 296 275 75 6 chr17 6029780 6029940 -83474613 + L1ME LINE L1 5274 5444 -677 2168 122 3 0 chr17 6029944 6030248 -83474305 + AluSx SINE Alu 7 311 -1 1418 203 52 41 chr17 6030544 6030933 -83473620 + L1ME2 LINE L1 5755 6144 -20 1525 184 122 6 chr17 6031158 6031494 -83473059 + L1MC4 LINE L1 6529 6903 -1139 21 0 0 0 chr17 6031498 6031519 -83473034 + AT_rich Low_complexity Low_complexity 1 21 0 1465 177 3 46 chr17 6031522 6031805 -83472748 + AluJo SINE Alu 5 275 -37 623 280 160 6 chr17 6031868 6032193 -83472360 + L1ME LINE L1 5430 5804 -317 1492 193 0 11 chr17 6032269 6032539 -83472014 - AluJb SINE Alu -24 288 22 250 143 0 24 chr17 6032544 6032586 -83471967 - FAM SINE Alu -35 144 104 * 291 145 84 72 chr17 6032572 6032655 -83471898 - FAM SINE Alu -31 144 61 429 113 0 0 chr17 6032896 6032967 -83471586 + Alu SINE Alu 239 309 -1 2201 116 3 0 chr17 6035085 6035386 -83469167 - AluSx SINE Alu -10 302 1 21 57 0 0 chr17 6036768 6036803 -83467750 + AT_rich Low_complexity Low_complexity 1 35 0 710 140 18 0 chr17 6036803 6036917 -83467636 - FLAM_C SINE Alu -26 117 2 201 317 39 29 chr17 6037510 6037614 -83466939 - L2 LINE L2 -240 3032 2928 2219 109 0 3 chr17 6037694 6037987 -83466566 - AluSq SINE Alu -21 292 1 328 316 59 33 chr17 6038297 6038449 -83466104 - MER5B DNA MER1_type -22 156 1 23 0 0 0 chr17 6039662 6039685 -83464868 + GC_rich Low_complexity Low_complexity 1 23 0 681 181 0 0 chr17 6040571 6040676 -83463877 + AluSg/x SINE Alu 146 250 -62 1288 159 0 26 chr17 6040676 6040908 -83463645 + AluJb SINE Alu 85 310 -2 2147 135 3 0 chr17 6040972 6041275 -83463278 - AluSx SINE Alu -8 304 1 975 266 54 43 chr17 6041275 6041624 -83462929 - MER67C LTR ERV1 -201 509 157 1155 170 35 25 chr17 6043321 6043521 -83461032 - AluJo SINE Alu -25 287 86 746 234 177 54 chr17 6044378 6044616 -83459937 + MLT1D LTR MaLR 1 258 -132 2388 86 3 3 chr17 6044616 6044917 -83459636 + AluSx SINE Alu 1 301 -11 746 234 177 54 chr17 6044917 6045069 -83459484 + MLT1D LTR MaLR 258 390 0 2050 125 10 7 chr17 6045697 6046001 -83458552 + AluSx SINE Alu 1 305 -7 850 173 0 37 chr17 6046001 6046151 -83458402 + AluSg/x SINE Alu 134 288 -24 279 0 0 0 chr17 6046151 6046182 -83458371 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1856 160 0 10 chr17 6046182 6046482 -83458071 + AluJb SINE Alu 2 298 -14 2389 211 49 42 chr17 6046496 6047066 -83457487 + L1M4 LINE L1 3750 4327 -1819 1818 168 0 7 chr17 6047066 6047363 -83457190 - AluJo SINE Alu -17 295 1 2389 211 49 42 chr17 6047363 6047485 -83457068 + L1M4 LINE L1 4327 4447 -1699 264 108 0 0 chr17 6047488 6047525 -83457028 - THE1B LTR MaLR 0 364 328 1126 194 0 0 chr17 6047525 6047742 -83456811 + L1M4 LINE L1 4591 4807 -1339 859 144 0 0 chr17 6047754 6047872 -83456681 + AluSq/x SINE Alu 1 118 -194 1222 123 0 0 chr17 6047908 6048078 -83456475 - AluSg/x SINE Alu -12 298 129 869 162 7 7 chr17 6048090 6048238 -83456315 - AluYa5 SINE Alu -30 281 134 944 151 0 7 chr17 6048731 6048904 -83455649 - AluJb SINE Alu 0 311 140 2258 102 7 3 chr17 6048917 6049220 -83455333 - AluSx SINE Alu -8 304 1 302 252 26 52 chr17 6049554 6049669 -83454884 - L1ME LINE L1 -309 5855 5744 2158 120 3 0 chr17 6050073 6050365 -83454188 + AluSx SINE Alu 1 293 -19 1870 134 13 17 chr17 6051503 6051801 -83452752 - AluSx SINE Alu -15 297 1 755 161 35 0 chr17 6052270 6052413 -83452140 - L1MB7 LINE L1 -10 6174 6027 432 0 0 0 chr17 6052437 6052485 -83452068 + (CA)n Simple_repeat Simple_repeat 2 49 0 826 189 47 11 chr17 6052487 6052677 -83451876 - L1MB8 LINE L1 -140 6038 5842 1549 133 12 8 chr17 6052820 6053061 -83451492 - AluSx SINE Alu -16 296 55 2075 96 0 77 chr17 6053183 6053371 -83451182 - AluSx SINE Alu -13 299 145 2120 113 3 28 chr17 6053371 6053689 -83450864 - AluSg SINE Alu 0 310 1 2075 96 0 77 chr17 6053689 6053824 -83450729 - AluSx SINE Alu -167 145 1 189 107 0 0 chr17 6053843 6053871 -83450682 + (T)n Simple_repeat Simple_repeat 1 28 0 1574 154 0 55 chr17 6054157 6054469 -83450084 + AluJb SINE Alu 1 295 -17 1543 128 128 12 chr17 6054610 6054886 -83449667 - AluSg SINE Alu 0 308 4 891 175 6 47 chr17 6054922 6055093 -83449460 + FRAM SINE Alu 1 164 -2 203 299 52 13 chr17 6055351 6055428 -83449125 + L2 LINE L2 3193 3272 0 2350 79 10 7 chr17 6056268 6056573 -83447980 - AluSp SINE Alu -7 306 1 214 272 72 24 chr17 6058115 6058240 -83446313 + L2 LINE L2 1632 1762 -1552 263 313 0 0 chr17 6058792 6058856 -83445697 + L2 LINE L2 3020 3083 -189 2291 108 0 0 chr17 6060831 6061127 -83443426 - AluSx SINE Alu -14 298 3 2084 137 0 10 chr17 6061214 6061513 -83443040 + AluSx SINE Alu 1 296 -16 943 144 0 60 chr17 6061520 6061687 -83442866 + AluSq SINE Alu 136 292 -21 23 0 0 0 chr17 6061716 6061739 -83442814 + AT_rich Low_complexity Low_complexity 1 23 0 2245 110 0 7 chr17 6066740 6067048 -83437505 - AluSx SINE Alu -6 306 1 2074 106 11 11 chr17 6067052 6067335 -83437218 - AluY SINE Alu -28 283 1 241 233 35 47 chr17 6067835 6067921 -83436632 - MARNA DNA Mariner -76 510 426 2341 103 7 0 chr17 6068243 6068543 -83436010 + AluSx SINE Alu 1 302 -10 2376 87 7 0 chr17 6068631 6068929 -83435624 + AluSx SINE Alu 1 300 -12 1498 142 120 29 chr17 6069447 6069722 -83434831 - AluJo SINE Alu -12 300 1 372 282 77 45 chr17 6069769 6070023 -83434530 + MIR SINE MIR 1 258 -4 283 179 73 113 chr17 6071310 6071461 -83433092 - L1ME3 LINE L1 -78 6084 5940 1770 148 17 44 chr17 6071548 6071703 -83432850 - AluJb SINE Alu -23 289 144 2274 90 3 17 chr17 6071703 6072002 -83432551 - AluSg SINE Alu -15 295 1 1770 148 17 44 chr17 6072002 6072143 -83432410 - AluJb SINE Alu -168 144 1 2211 122 0 3 chr17 6072178 6072481 -83432072 - AluSg SINE Alu -6 304 3 935 290 78 31 chr17 6072675 6073164 -83431389 - L2 LINE L2 -836 2478 1967 497 324 66 28 chr17 6073174 6073398 -83431155 - L2 LINE L2 -67 3205 2966 225 0 0 0 chr17 6073398 6073423 -83431130 + (CTGGGG)n Simple_repeat Simple_repeat 1 25 0 497 324 66 28 chr17 6073423 6073485 -83431068 - L2 LINE L2 -306 2966 2908 1132 143 16 108 chr17 6074016 6074274 -83430279 - MER46A DNA MER2_type -1 235 2 1757 127 46 3 chr17 6074282 6074565 -83429988 - AluSx SINE Alu -17 295 1 3574 170 46 43 chr17 6074567 6074675 -83429878 - L1MB8 LINE L1 -5 6173 6067 2103 106 0 3 chr17 6074675 6074968 -83429585 + AluSq SINE Alu 1 292 -21 3574 170 46 43 chr17 6074968 6075666 -83428887 - L1MB8 LINE L1 -111 6067 5365 372 198 124 8 chr17 6075684 6075805 -83428748 - L1MB8 LINE L1 -863 5283 5149 1724 164 0 7 chr17 6075805 6076098 -83428455 + AluJb SINE Alu 1 291 -21 1300 224 119 17 chr17 6076105 6076458 -83428095 + MLT1D LTR MaLR 115 503 -2 471 199 14 55 chr17 6076463 6076609 -83427944 - L1MB8 LINE L1 -2091 4055 3916 1835 121 32 38 chr17 6076636 6076950 -83427603 - AluSx SINE Alu 0 312 1 2087 103 3 7 chr17 6077037 6077338 -83427215 - AluSx SINE Alu -12 300 1 2146 84 7 17 chr17 6077342 6077638 -83426915 - AluSc SINE Alu -16 293 1 2362 63 0 10 chr17 6077638 6077938 -83426615 - AluY SINE Alu -14 297 1 180 0 0 0 chr17 6077938 6077958 -83426595 + (T)n Simple_repeat Simple_repeat 1 20 0 451 236 48 34 chr17 6077982 6078262 -83426291 - L1MB8 LINE L1 -2708 3438 3120 1084 158 32 50 chr17 6078589 6078810 -83425743 - Tigger1 DNA MER2_type 0 2418 2202 572 169 127 28 chr17 6078799 6078941 -83425612 - Tigger1 DNA MER2_type -2261 157 2 * 2289 76 10 0 chr17 6078964 6079265 -83425288 + AluSg SINE Alu 1 304 -6 30 0 0 0 chr17 6079813 6079843 -83424710 + AT_rich Low_complexity Low_complexity 1 30 0 2194 88 7 0 chr17 6079849 6080146 -83424407 + AluSp SINE Alu 1 299 -14 1950 129 33 0 chr17 6080782 6081085 -83423468 + AluSp SINE Alu 1 313 0 181 225 113 14 chr17 6081172 6081243 -83423310 + MIR3 SINE MIR 100 177 -31 1066 144 18 140 chr17 6081420 6081469 -83423084 - L1MA5 LINE L1 -450 5850 5797 1501 182 52 0 chr17 6081469 6081738 -83422815 + AluJb SINE Alu 1 283 -19 1066 144 18 140 chr17 6081738 6081806 -83422747 - L1MA5 LINE L1 -503 5797 5722 1686 136 3 48 chr17 6081806 6081944 -83422609 + AluSx SINE Alu 1 144 -161 2144 108 0 3 chr17 6081944 6082251 -83422302 + AluSg SINE Alu 2 307 -3 1686 136 3 48 chr17 6082251 6082430 -83422123 + AluSx SINE Alu 144 305 0 1066 144 18 140 chr17 6082430 6082595 -83421958 - L1MA5 LINE L1 -578 5722 5601 2208 105 0 3 chr17 6083078 6083392 -83421161 + AluSq SINE Alu 1 313 0 192 304 139 13 chr17 6083725 6083804 -83420749 - L2 LINE L2 -18 3254 3166 302 319 173 34 chr17 6084128 6084158 -83420395 + L2 LINE L2 1798 1822 -1492 917 164 41 55 chr17 6084158 6084377 -83420176 + MER20 DNA MER1_type 3 218 -1 302 319 173 34 chr17 6084377 6084791 -83419762 + L2 LINE L2 1822 2304 -1010 1191 106 156 0 chr17 6085418 6085512 -83419041 + MER30 DNA MER1_type 1 79 -151 195 42 0 0 chr17 6085512 6085536 -83419017 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 1191 106 156 0 chr17 6085536 6085640 -83418913 + MER30 DNA MER1_type 79 230 0 185 330 11 78 chr17 6087012 6087191 -83417362 + L2 LINE L2 3030 3196 -76 486 278 88 78 chr17 6087714 6087839 -83416714 + L1ME4a LINE L1 5718 5840 -281 2480 69 0 0 chr17 6087839 6088144 -83416409 + AluSq SINE Alu 1 305 -8 486 278 88 78 chr17 6088144 6088324 -83416229 + L1ME4a LINE L1 5840 6026 -95 1033 273 145 26 chr17 6088331 6088916 -83415637 - L2 LINE L2 -9 3304 2661 753 117 8 17 chr17 6089205 6089325 -83415228 + AluJb SINE Alu 11 129 -183 209 364 53 30 chr17 6089886 6090018 -83414535 + L2 LINE L2 3133 3267 -5 2240 88 0 52 chr17 6090029 6090358 -83414195 + AluSx SINE Alu 1 312 0 310 98 0 0 chr17 6091145 6091186 -83413367 + Tigger7 DNA MER2_type 227 267 -466 * 444 167 0 83 chr17 6091184 6091280 -83413273 + Tigger7 DNA MER2_type 2489 2576 -11 1178 164 45 0 chr17 6091818 6092019 -83412534 - AluJb SINE Alu -102 210 1 336 330 40 17 chr17 6092283 6092459 -83412094 - MIR3 SINE MIR -9 199 20 2084 102 3 3 chr17 6092948 6093242 -83411311 - AluSp SINE Alu -19 294 1 1697 129 19 0 chr17 6093387 6093643 -83410910 + AluSx SINE Alu 1 261 -51 590 100 0 0 chr17 6093646 6093726 -83410827 + AluSg/x SINE Alu 212 291 -18 39 0 0 0 chr17 6093726 6093765 -83410788 + AT_rich Low_complexity Low_complexity 1 39 0 1859 146 3 3 chr17 6093765 6094067 -83410486 - AluSx SINE Alu -10 302 1 309 289 51 64 chr17 6094146 6094302 -83410251 - MIR SINE MIR -50 212 59 248 86 224 52 chr17 6094378 6094436 -83410117 - Tigger5 DNA MER2_type -5 2318 2251 * 323 182 0 0 chr17 6094405 6094460 -83410093 - Tigger5 DNA MER2_type -2268 55 1 446 117 0 0 chr17 6094482 6094542 -83410011 + Tigger5 DNA MER2_type 2264 2323 0 2346 95 0 0 chr17 6094610 6094914 -83409639 + AluSx SINE Alu 1 304 -8 222 37 0 0 chr17 6094928 6094955 -83409598 + (CA)n Simple_repeat Simple_repeat 2 28 0 1317 163 47 57 chr17 6095580 6095881 -83408672 - AluJb SINE Alu -3 299 2 898 164 0 44 chr17 6096049 6096232 -83408321 + AluJb SINE Alu 125 299 -13 260 225 67 67 chr17 6096256 6096304 -83408249 - L2 LINE L2 -85 3228 3181 1833 142 0 0 chr17 6096304 6096605 -83407948 + AluSx SINE Alu 1 301 0 2174 91 7 13 chr17 6096607 6096915 -83407638 + AluSq SINE Alu 1 306 -7 260 225 67 67 chr17 6096915 6096951 -83407602 - L2 LINE L2 -132 3181 3140 2094 91 7 0 chr17 6097013 6097299 -83407254 - AluSx SINE Alu -24 288 1 262 303 64 9 chr17 6097766 6097875 -83406678 + L2 LINE L2 3023 3137 -176 269 253 72 24 chr17 6098676 6098759 -83405794 + L2 LINE L2 2275 2361 -953 796 234 112 0 chr17 6099503 6099700 -83404853 - MER20 DNA MER1_type 0 219 1 196 300 0 0 chr17 6100468 6100518 -83404035 - MER5A DNA MER1_type -59 130 81 1580 107 37 12 chr17 6100546 6100789 -83403764 - AluSx SINE Alu -17 295 47 347 306 116 16 chr17 6100885 6101006 -83403547 + MIR SINE MIR 18 150 -58 361 335 64 6 chr17 6101077 6101250 -83403303 - MIR SINE MIR 0 262 80 253 281 37 12 chr17 6101867 6101949 -83402604 - MIR SINE MIR -171 91 8 1527 170 22 58 chr17 6101977 6102288 -83402265 + AluJo SINE Alu 3 302 0 1081 132 42 0 chr17 6102505 6102672 -83401881 - AluJ SINE Alu -10 302 129 22 0 0 0 chr17 6102672 6102694 -83401859 + AT_rich Low_complexity Low_complexity 1 22 0 1718 166 0 17 chr17 6102726 6103028 -83401525 - AluJb SINE Alu -3 309 13 819 170 7 27 chr17 6103030 6103177 -83401376 - AluJ SINE Alu -167 145 2 386 305 114 0 chr17 6103182 6103313 -83401240 + MIR SINE MIR 117 262 0 * 607 295 163 18 chr17 6103301 6103528 -83401025 + MIR SINE MIR 1 260 -2 811 219 14 0 chr17 6103742 6103888 -83400665 - MER58B DNA MER1_type 0 341 194 253 234 252 47 chr17 6103901 6104008 -83400545 + L2 LINE L2 3142 3270 -2 2139 96 7 7 chr17 6104080 6104383 -83400170 - AluSx SINE Alu -9 303 1 723 218 0 0 chr17 6105127 6105251 -83399302 - MER63A DNA MER1_type -37 173 50 2212 89 0 10 chr17 6105387 6105689 -83398864 - AluSg SINE Alu -11 299 1 2252 94 0 0 chr17 6105881 6106178 -83398375 - AluSx SINE Alu -10 302 6 189 171 0 0 chr17 6107501 6107536 -83397017 + (TATG)n Simple_repeat Simple_repeat 2 36 0 384 282 26 34 chr17 6108189 6108306 -83396247 - MIR3 SINE MIR -78 130 15 208 240 73 62 chr17 6108420 6108516 -83396037 + L2 LINE L2 2860 2956 -316 2148 101 0 0 chr17 6108633 6108920 -83395633 + AluSx SINE Alu 1 287 -25 2179 112 0 6 chr17 6108930 6109243 -83395310 + AluSq SINE Alu 1 311 -2 1814 155 7 0 chr17 6109952 6110248 -83394305 + AluSx SINE Alu 1 298 -14 869 85 78 0 chr17 6110620 6110749 -83393804 - MER85 DNA T2_type 0 139 1 252 301 92 46 chr17 6112701 6112874 -83391679 + MIR3 SINE MIR 21 201 -7 2369 59 0 0 chr17 6113212 6113501 -83391052 - AluSc SINE Alu -8 301 13 2160 76 0 57 chr17 6114495 6114812 -83389741 + AluSc SINE Alu 1 299 -10 931 177 61 140 chr17 6115106 6115485 -83389068 + L1MB7 LINE L1 4960 5308 -838 1855 92 42 0 chr17 6115489 6115751 -83388802 + AluSg SINE Alu 5 277 -33 1097 211 50 18 chr17 6115765 6116044 -83388509 + L1MB7 LINE L1 5897 6184 0 1591 126 89 0 chr17 6116085 6116356 -83388197 - AluSg SINE Alu -13 297 3 1639 103 63 16 chr17 6118206 6118458 -83386095 + MER21A LTR ERV1 1 264 -667 2959 147 75 10 chr17 6118465 6118983 -83385570 + MER21A LTR ERV1 378 929 -2 1191 191 108 0 chr17 6119254 6119495 -83385058 + MER21B LTR ERV1 292 558 -305 1758 140 24 10 chr17 6120633 6120925 -83383628 - AluSx SINE Alu -1 311 16 518 48 0 0 chr17 6120925 6120988 -83383565 - AluY SINE Alu -247 64 2 225 0 0 0 chr17 6120998 6121023 -83383530 + (T)n Simple_repeat Simple_repeat 1 25 0 187 211 225 0 chr17 6121637 6121708 -83382845 - MIR3 SINE MIR -15 193 107 298 149 15 90 chr17 6121798 6121865 -83382688 + U7 snRNA snRNA 1 62 -1 414 273 77 28 chr17 6122588 6122731 -83381822 - MIR SINE MIR -36 226 77 2476 87 0 0 chr17 6123817 6124126 -83380427 - AluSx SINE Alu -3 309 1 1891 152 0 24 chr17 6124729 6125026 -83379527 - AluSx SINE Alu -22 290 1 197 265 0 0 chr17 6125044 6125093 -83379460 + L2 LINE L2 2997 3045 -227 491 246 16 0 chr17 6125129 6125251 -83379302 + MIR SINE MIR 62 185 -77 191 247 86 37 chr17 6125297 6125378 -83379175 + MIR SINE MIR 178 262 0 1073 83 0 0 chr17 6125983 6126116 -83378437 + AluSq/x SINE Alu 1 133 -179 1961 80 109 11 chr17 6126120 6126395 -83378158 + AluSc SINE Alu 1 302 -7 2232 84 0 52 chr17 6126644 6126975 -83377578 + AluSx SINE Alu 1 315 0 449 214 65 54 chr17 6127073 6127241 -83377312 + L1ME4a LINE L1 5952 6121 0 21 82 0 0 chr17 6127319 6127368 -83377185 + AT_rich Low_complexity Low_complexity 1 49 0 649 192 146 0 chr17 6127700 6127830 -83376723 - FRAM SINE Alu -30 146 1 349 226 88 38 chr17 6128002 6128161 -83376392 + L1ME LINE L1 5210 5376 -770 2194 120 0 16 chr17 6128176 6128484 -83376069 - AluSx SINE Alu -9 303 1 291 267 38 19 chr17 6128546 6128651 -83375902 + MIR SINE MIR 137 243 -19 2158 120 3 0 chr17 6129860 6130152 -83374401 - AluSx SINE Alu -19 293 1 302 252 26 52 chr17 6130556 6130671 -83373882 + L1ME LINE L1 5744 5855 -309 2301 102 3 3 chr17 6131005 6131309 -83373244 + AluSx SINE Alu 1 304 -8 945 151 0 7 chr17 6131322 6131495 -83373058 + AluJb SINE Alu 140 311 0 869 112 77 7 chr17 6132001 6132144 -83372409 + FAM SINE Alu 12 164 -21 438 231 56 0 chr17 6133017 6133125 -83371428 + MER81 DNA DNA 1 114 0 332 283 99 24 chr17 6134244 6134456 -83370097 + MIR SINE MIR 23 250 -12 328 170 0 19 chr17 6135112 6135353 -83369200 + AluJo SINE Alu 1 301 -1 2186 78 0 4 chr17 6135804 6136074 -83368479 + AluSx SINE Alu 33 301 -11 1897 141 57 0 chr17 6136088 6136371 -83368182 + AluSx SINE Alu 1 299 -13 37 81 0 0 chr17 6136383 6136469 -83368084 + AT_rich Low_complexity Low_complexity 1 86 0 296 261 33 11 chr17 6136795 6136887 -83367666 + HAL1 LINE L1 324 417 -2090 242 269 19 39 chr17 6136907 6137011 -83367542 + HAL1 LINE L1 1802 1903 -604 608 230 0 0 chr17 6137214 6137340 -83367213 + FLAM_A SINE Alu 1 126 -7 265 285 78 66 chr17 6137418 6137660 -83366893 + HAL1 LINE L1 2263 2507 0 1760 174 3 7 chr17 6137663 6137950 -83366603 + AluJo SINE Alu 1 286 -26 24 32 0 0 chr17 6137954 6137985 -83366568 + AT_rich Low_complexity Low_complexity 1 31 0 1836 152 24 7 chr17 6138187 6138477 -83366076 - AluJo SINE Alu -17 295 1 930 138 7 22 chr17 6138556 6138694 -83365859 - AluJo SINE Alu -176 136 1 255 219 67 92 chr17 6138696 6138763 -83365790 - MER112 DNA MER1_type -144 116 52 2442 81 0 0 chr17 6138763 6139061 -83365492 - AluY SINE Alu -13 298 1 255 219 67 92 chr17 6139061 6139112 -83365441 - MER112 DNA MER1_type -208 52 1 2406 92 0 0 chr17 6139251 6139554 -83364999 - AluSx SINE Alu -9 303 1 2151 76 42 21 chr17 6140081 6140369 -83364184 + AluY SINE Alu 3 296 -15 1553 92 0 5 chr17 6140390 6140596 -83363957 - AluSx SINE Alu -107 205 1 2542 76 0 0 chr17 6140684 6140987 -83363566 - AluSx SINE Alu -9 303 1 387 261 14 70 chr17 6141309 6141451 -83363102 - L2 LINE L2 0 3272 3139 2142 96 17 14 chr17 6141545 6141837 -83362716 + AluSg SINE Alu 1 293 -17 1821 163 16 3 chr17 6142486 6142793 -83361760 + AluJo SINE Alu 1 311 -1 1794 171 20 0 chr17 6142801 6143099 -83361454 + AluJb SINE Alu 1 304 -8 656 269 29 43 chr17 6143146 6143425 -83361128 + L1ME LINE L1 5478 5752 -369 184 333 51 0 chr17 6144116 6144194 -83360359 + L2 LINE L2 1106 1187 -2127 894 195 32 45 chr17 6144194 6144415 -83360138 - MER46A DNA MER2_type -17 219 2 1435 179 113 31 chr17 6144843 6145162 -83359391 + MER47A DNA MER2_type 20 364 -2 3130 124 0 0 chr17 6145309 6145760 -83358793 + LTR19A-int LTR ERV1 2526 2976 -2039 3072 63 8 0 chr17 6145787 6146166 -83358387 + LTR19A-int LTR ERV1 5205 5586 0 2304 142 28 73 chr17 6146166 6146675 -83357878 + LTR19A LTR ERV1 1 486 0 2486 60 3 10 chr17 6147924 6148238 -83356315 - AluSp SINE Alu -1 312 1 185 176 0 141 chr17 6148370 6148455 -83356098 - MIR SINE MIR -74 188 116 397 246 153 16 chr17 6149310 6149493 -83355060 - Charlie8 DNA MER1_type -2164 253 46 253 246 146 27 chr17 6150026 6150136 -83354417 + LTR11 LTR ERV 345 467 -217 218 209 0 0 chr17 6150389 6150432 -83354121 - L2 LINE L2 -557 2757 2715 225 146 0 0 chr17 6152368 6152416 -83352137 + (A)n Simple_repeat Simple_repeat 1 48 0 927 115 0 23 chr17 6152417 6152547 -83352006 + FLAM_C SINE Alu 1 127 -16 26 50 0 0 chr17 6152547 6152587 -83351966 + AT_rich Low_complexity Low_complexity 1 40 0 287 168 158 42 chr17 6153911 6154006 -83350547 + L1MB3 LINE L1 5694 5799 -384 2377 83 3 3 chr17 6154006 6154306 -83350247 - AluSx SINE Alu -12 300 1 1411 117 10 15 chr17 6154306 6154511 -83350042 + AluSg/x SINE Alu 94 297 -13 1627 100 118 42 chr17 6154511 6154841 -83349712 + L1MB3 LINE L1 5828 6182 -1 327 269 75 6 chr17 6155089 6155249 -83349304 + L1ME LINE L1 5274 5444 -677 2229 114 3 0 chr17 6155250 6155557 -83348996 + AluSx SINE Alu 4 311 -1 1418 203 52 41 chr17 6155853 6156242 -83348311 + L1ME2 LINE L1 5755 6144 -20 1518 197 106 6 chr17 6156473 6156803 -83347750 + L1MC4 LINE L1 6541 6903 -1139 21 0 0 0 chr17 6156807 6156828 -83347725 + AT_rich Low_complexity Low_complexity 1 21 0 1567 166 0 46 chr17 6156831 6157115 -83347438 + AluJo SINE Alu 5 275 -37 591 286 160 6 chr17 6157178 6157503 -83347050 + L1ME LINE L1 5430 5804 -317 1697 180 0 0 chr17 6157579 6157846 -83346707 - AluJb SINE Alu -24 288 22 250 143 0 24 chr17 6157851 6157893 -83346660 - FAM SINE Alu -35 144 104 * 291 145 84 72 chr17 6157879 6157962 -83346591 - FAM SINE Alu -31 144 61 414 113 0 0 chr17 6158203 6158274 -83346279 + Alu SINE Alu 240 310 -1 2178 117 3 0 chr17 6160395 6160694 -83343859 - AluSg SINE Alu -10 300 1 21 57 0 0 chr17 6162076 6162111 -83342442 + AT_rich Low_complexity Low_complexity 1 35 0 710 140 18 0 chr17 6162111 6162225 -83342328 - FLAM_C SINE Alu -26 117 2 201 317 39 29 chr17 6162818 6162922 -83341631 - L2 LINE L2 -240 3032 2928 2295 96 0 3 chr17 6163002 6163295 -83341258 - AluSq SINE Alu -21 292 1 328 316 59 33 chr17 6163605 6163757 -83340796 - MER5B DNA MER1_type -22 156 1 23 0 0 0 chr17 6164966 6164989 -83339564 + GC_rich Low_complexity Low_complexity 1 23 0 681 181 0 0 chr17 6165874 6165979 -83338574 + AluSg/x SINE Alu 146 250 -62 1248 168 0 26 chr17 6165979 6166211 -83338342 + AluJb SINE Alu 85 310 -2 2166 132 3 0 chr17 6166275 6166578 -83337975 - AluSx SINE Alu -8 304 1 1025 266 51 43 chr17 6166578 6166928 -83337625 - MER67C LTR ERV1 -201 509 157 189 308 206 39 chr17 6166954 6167314 -83337239 - L2 LINE L2 -2231 1083 664 1155 170 35 25 chr17 6168625 6168825 -83335728 - AluJo SINE Alu -25 287 86 693 226 242 28 chr17 6169677 6169915 -83334638 + MLT1D LTR MaLR 1 187 -280 2391 92 3 3 chr17 6169915 6170220 -83334333 + AluSx SINE Alu 1 305 -7 693 226 242 28 chr17 6170220 6170372 -83334181 + MLT1D LTR MaLR 187 467 0 1977 142 10 3 chr17 6170998 6171301 -83333252 + AluSx SINE Alu 1 305 -7 869 171 0 49 chr17 6171301 6171451 -83333102 + AluSg/x SINE Alu 132 288 -22 243 0 0 0 chr17 6171451 6171478 -83333075 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1880 156 0 10 chr17 6171478 6171779 -83332774 + AluJb SINE Alu 2 299 -13 869 171 0 49 chr17 6171779 6171791 -83332762 + AluSg/x SINE Alu 286 287 -23 3299 219 104 66 chr17 6171795 6172365 -83332188 + L1M4 LINE L1 3750 4297 -1849 1832 168 0 7 chr17 6172365 6172662 -83331891 - AluJb SINE Alu -17 295 1 3299 219 104 66 chr17 6172662 6172787 -83331766 + L1M4 LINE L1 4297 4416 -1730 264 108 0 0 chr17 6172787 6172824 -83331729 - THE1B LTR MaLR 0 364 328 3299 219 104 66 chr17 6172824 6173053 -83331500 + L1M4 LINE L1 4416 4635 -1511 2223 123 0 22 chr17 6173053 6173371 -83331182 + AluSx SINE Alu 1 311 -1 3299 219 104 66 chr17 6173371 6173885 -83330668 + L1M4 LINE L1 4635 5283 -863 1975 115 25 4 chr17 6173888 6174166 -83330387 + AluSx SINE Alu 2 285 -27 181 0 0 0 chr17 6174166 6174186 -83330367 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1202 179 0 0 chr17 6174186 6174382 -83330171 + AluJb SINE Alu 111 306 -6 618 160 40 8 chr17 6174382 6174507 -83330046 + L1MB8 LINE L1 6049 6177 -1 710 204 119 6 chr17 6174507 6174683 -83329870 + MIR SINE MIR 19 214 -48 258 283 33 0 chr17 6174715 6174775 -83329778 + L2 LINE L2 3157 3218 -54 2196 95 10 23 chr17 6174812 6175117 -83329436 + AluSp SINE Alu 1 301 -12 719 203 8 8 chr17 6175555 6175688 -83328865 - FLAM_A SINE Alu 0 133 1 2113 122 3 7 chr17 6176501 6176795 -83327758 + AluSx SINE Alu 1 293 -19 782 147 0 0 chr17 6176795 6176911 -83327642 + AluSc SINE Alu 132 247 -62 225 94 0 0 chr17 6176912 6176944 -83327609 + (A)n Simple_repeat Simple_repeat 1 32 0 271 276 62 53 chr17 6177509 6177752 -83326801 - L1MEd LINE L1 -4894 1225 981 21 0 0 0 chr17 6177962 6177983 -83326570 + AT_rich Low_complexity Low_complexity 1 21 0 2297 112 0 0 chr17 6178784 6179078 -83325475 + AluSx SINE Alu 1 294 -18 350 287 19 9 chr17 6179114 6179222 -83325331 + MIR SINE MIR 154 262 0 3593 115 32 2 chr17 6179261 6179816 -83324737 + LTR26 LTR ERV1 1 572 -31 393 314 51 22 chr17 6180060 6180197 -83324356 + MIR SINE MIR 51 191 -71 236 291 0 78 chr17 6181531 6181672 -83322881 - LTR16C LTR ERVL -15 476 347 1957 207 27 56 chr17 6181889 6182407 -83322146 + MLT1D LTR MaLR 1 503 -2 387 283 123 65 chr17 6182759 6182880 -83321673 - L2 LINE L2 -15 3298 3186 2380 98 0 0 chr17 6182880 6183176 -83321377 + AluSx SINE Alu 1 296 -16 387 283 123 65 chr17 6183176 6183379 -83321174 - L2 LINE L2 -127 3186 2955 344 307 45 61 chr17 6183679 6183874 -83320679 + MIR SINE MIR 7 198 -61 429 20 0 0 chr17 6184043 6184093 -83320460 + (GA)n Simple_repeat Simple_repeat 1 50 0 602 168 2 6 chr17 6184394 6184506 -83320047 - L1MC3 LINE L1 -2 7783 6230 2436 80 0 3 chr17 6185116 6185417 -83319136 + AluY SINE Alu 1 300 -11 368 269 56 9 chr17 6186075 6186183 -83318370 - MIR SINE MIR -111 151 39 406 291 0 47 chr17 6186454 6186581 -83317972 + MIR3 SINE MIR 10 130 -78 298 248 8 66 chr17 6186591 6186712 -83317841 + MIR SINE MIR 92 205 -57 804 100 0 0 chr17 6187587 6187707 -83316846 + (TTCTC)n Simple_repeat Simple_repeat 4 123 0 2341 81 0 0 chr17 6187707 6187992 -83316561 - AluSq SINE Alu -28 285 1 514 231 84 30 chr17 6188219 6188374 -83316179 - MIR SINE MIR -63 145 7 761 178 7 22 chr17 6189016 6189151 -83315402 - FLAM_C SINE Alu 0 133 1 2129 134 0 3 chr17 6189157 6189455 -83315098 - AluSx SINE Alu -15 297 1 2180 113 23 3 chr17 6189460 6189762 -83314791 - AluSx SINE Alu -4 308 1 319 289 11 11 chr17 6189872 6189962 -83314591 - MIR3 SINE MIR -27 181 92 554 296 47 28 chr17 6190383 6190596 -83313957 - MIR SINE MIR -37 225 9 1295 172 97 0 chr17 6191768 6192036 -83312517 + MLT1D LTR MaLR 1 294 -211 1897 206 28 17 chr17 6192241 6192703 -83311850 + L1M4 LINE L1 4817 5283 -863 1989 112 25 4 chr17 6192706 6193004 -83311549 + AluSx SINE Alu 2 305 0 1202 179 0 0 chr17 6193004 6193200 -83311353 + AluJb SINE Alu 111 306 -6 600 160 40 8 chr17 6193200 6193325 -83311228 + L1MB8 LINE L1 6049 6177 -1 710 204 119 6 chr17 6193325 6193501 -83311052 + MIR SINE MIR 19 214 -48 258 283 33 0 chr17 6193533 6193593 -83310960 + L2 LINE L2 3157 3218 -54 2186 116 0 3 chr17 6193630 6193932 -83310621 + AluSx SINE Alu 1 301 -11 1852 150 56 3 chr17 6193946 6194232 -83310321 + AluSx SINE Alu 1 301 -11 37 81 0 0 chr17 6194244 6194330 -83310223 + AT_rich Low_complexity Low_complexity 1 86 0 279 237 26 13 chr17 6194672 6194748 -83309805 + HAL1 LINE L1 341 417 -2090 397 304 24 60 chr17 6194772 6194940 -83309613 + HAL1 LINE L1 1803 1964 -543 523 332 62 51 chr17 6195024 6195075 -83309478 + HAL1 LINE L1 2131 2180 -327 587 211 8 23 chr17 6195075 6195203 -83309350 + FLAM_A SINE Alu 1 126 -7 523 332 62 51 chr17 6195203 6195524 -83309029 + HAL1 LINE L1 2180 2507 0 1783 190 3 7 chr17 6195527 6195837 -83308716 + AluJo SINE Alu 1 309 -3 1862 152 24 7 chr17 6196050 6196340 -83308213 - AluJo SINE Alu -17 295 1 916 145 7 22 chr17 6196419 6196557 -83307996 - AluJo SINE Alu -176 136 1 229 219 67 92 chr17 6196559 6196626 -83307927 - MER112 DNA MER1_type -144 116 52 2424 80 0 3 chr17 6196626 6196925 -83307628 - AluY SINE Alu -13 298 1 229 219 67 92 chr17 6196925 6196976 -83307577 - MER112 DNA MER1_type -208 52 1 2440 92 0 0 chr17 6197112 6197418 -83307135 - AluSx SINE Alu -6 306 1 27 62 0 0 chr17 6199327 6199375 -83305178 + GC_rich Low_complexity Low_complexity 1 48 0 264 236 33 93 chr17 6200000 6200182 -83304371 - L1ME4a LINE L1 -16 6105 5935 290 143 32 0 chr17 6200796 6200859 -83303694 + L1M4 LINE L1 5498 5562 -612 2144 117 3 7 chr17 6200863 6201162 -83303391 - AluSx SINE Alu -14 298 1 262 233 11 79 chr17 6201524 6201713 -83302840 + (GAATG)n Simple_repeat Simple_repeat 2 177 0 189 0 0 0 chr17 6202709 6202730 -83301823 + (CAG)n Simple_repeat Simple_repeat 2 22 0 429 313 33 7 chr17 6202730 6202880 -83301673 - MIR SINE MIR -12 250 97 2313 104 0 0 chr17 6202909 6203198 -83301355 + AluSx SINE Alu 1 289 -23 294 29 0 0 chr17 6203199 6203234 -83301319 + (AATAG)n Simple_repeat Simple_repeat 4 38 0 189 0 0 0 chr17 6203494 6203515 -83301038 + (TGG)n Simple_repeat Simple_repeat 1 21 0 1959 254 94 34 chr17 6203606 6204245 -83300308 - MER45C DNA AcHobo -275 678 2 2217 117 3 0 chr17 6204574 6204873 -83299680 + AluSq SINE Alu 1 300 -13 2967 162 32 13 chr17 6204968 6205181 -83299372 + L1MB3 LINE L1 5618 5825 -358 2379 88 0 31 chr17 6205181 6205499 -83299054 + AluSq SINE Alu 1 308 -5 2967 162 32 13 chr17 6205499 6205840 -83298713 + L1MB3 LINE L1 5825 6183 0 257 0 30 0 chr17 6205882 6205915 -83298638 + (TTAAA)n Simple_repeat Simple_repeat 2 35 0 2014 140 0 40 chr17 6205984 6206119 -83298434 + AluSx SINE Alu 1 140 -172 2119 104 17 24 chr17 6206119 6206416 -83298137 + AluY SINE Alu 1 295 -16 2403 85 0 0 chr17 6206425 6206720 -83297833 + AluSg SINE Alu 1 295 -15 2014 140 0 40 chr17 6206720 6206895 -83297658 + AluSx SINE Alu 148 308 -4 761 192 8 0 chr17 6206895 6207020 -83297533 - FLAM_C SINE Alu -6 127 2 403 320 78 24 chr17 6207024 6207355 -83297198 + L1ME4a LINE L1 5567 5915 -206 500 143 0 0 chr17 6208149 6208219 -83296334 - AluSq SINE Alu -23 290 221 1054 136 0 19 chr17 6208222 6208376 -83296177 - AluSq SINE Alu -162 151 1 758 153 0 24 chr17 6208633 6208757 -83295796 - FLAM_C SINE Alu -1 142 22 1337 129 35 139 chr17 6208772 6208938 -83295615 - AluJo SINE Alu -17 295 174 2099 120 3 27 chr17 6208938 6209238 -83295315 - AluSx SINE Alu -19 293 1 1337 129 35 139 chr17 6209238 6209381 -83295172 - AluJo SINE Alu -138 174 18 233 310 110 20 chr17 6209387 6209487 -83295066 + L2 LINE L2 3173 3281 -32 * 250 288 158 56 chr17 6209485 6209700 -83294853 - MIR SINE MIR -6 256 20 2416 62 0 32 chr17 6209720 6210028 -83294525 + AluSx SINE Alu 1 298 -14 489 220 23 12 chr17 6210292 6210465 -83294088 + CT-rich Low_complexity Low_complexity 4 178 0 1029 188 6 0 chr17 6211184 6211360 -83293193 + MER45A DNA AcHobo 1 177 -1 767 159 40 0 chr17 6211373 6211499 -83293054 - MER41B LTR ERV1 -375 260 130 441 133 60 114 chr17 6211618 6211784 -83292769 + MER41B-int LTR ERV1 5923 6079 -252 749 195 31 0 chr17 6211834 6211962 -83292591 - FLAM_C SINE Alu 0 133 2 774 238 78 4 chr17 6212067 6212311 -83292242 + MER41B-int LTR ERV1 6412 6673 -3 2301 156 24 10 chr17 6212311 6212721 -83291832 + MER41B LTR ERV1 111 526 -109 26 74 0 0 chr17 6212721 6212775 -83291778 + AT_rich Low_complexity Low_complexity 1 54 0 428 115 16 0 chr17 6212780 6212841 -83291712 - U7 snRNA snRNA 0 63 2 310 220 8 41 chr17 6212841 6212963 -83291590 + MER41A LTR ERV1 404 474 -12 425 195 35 0 chr17 6214217 6214304 -83290249 - MIR3 SINE MIR -6 202 113 226 252 176 75 chr17 6214330 6214489 -83290064 - L3 LINE CR1 -60 1517 1343 644 332 135 42 chr17 6214540 6215131 -83289422 + L3 LINE CR1 733 1378 -199 558 232 73 40 chr17 6215171 6215322 -83289231 - MIR SINE MIR -60 202 47 188 256 78 116 chr17 6215776 6215905 -83288648 + MIR SINE MIR 20 143 -65 2070 126 7 0 chr17 6215962 6216255 -83288298 - AluY SINE Alu -15 296 2 1021 266 94 107 chr17 6216735 6217139 -83287414 + L2 LINE L2 2234 2642 -671 1195 195 172 19 chr17 6217139 6217400 -83287153 - AluJo SINE Alu -1 301 1 2012 128 0 39 chr17 6217409 6217576 -83286977 - AluSx SINE Alu -12 300 149 2466 78 0 0 chr17 6217576 6217872 -83286681 - AluY SINE Alu -15 296 1 2012 128 0 39 chr17 6217872 6218016 -83286537 - AluSx SINE Alu -163 149 1 2209 109 0 7 chr17 6218016 6218318 -83286235 - AluSq SINE Alu -13 300 1 1021 266 94 107 chr17 6218318 6218419 -83286134 + L2 LINE L2 2649 2750 -563 2489 91 3 0 chr17 6218419 6218726 -83285827 - AluSx SINE Alu -4 308 1 1021 266 94 107 chr17 6218726 6218975 -83285578 + L2 LINE L2 2750 2990 -323 969 210 23 14 chr17 6218975 6219194 -83285359 + MER90 LTR ERV1 392 612 -2 2527 84 0 0 chr17 6220387 6220695 -83283858 - AluSq SINE Alu -5 308 1 2232 146 16 14 chr17 6220791 6221155 -83283398 + MLT1A1 LTR MaLR 1 365 0 1090 198 0 0 chr17 6221709 6221886 -83282667 + FRAM SINE Alu 1 176 0 366 158 13 13 chr17 6222075 6222151 -83282402 + LTR67 LTR ERVL 460 535 -22 1779 117 44 0 chr17 6222496 6222744 -83281809 - AluSx SINE Alu -14 298 40 332 267 69 0 chr17 6223230 6223331 -83281222 - MIR SINE MIR -72 136 29 301 247 0 14 chr17 6223412 6223485 -83281068 + MER81 DNA DNA 1 72 -42 384 322 99 13 chr17 6223772 6223924 -83280629 - L2 LINE L2 -6 3266 3102 565 303 160 0 chr17 6224211 6224405 -83280148 + MIR SINE MIR 1 220 -42 2080 137 3 10 chr17 6224550 6224850 -83279703 - AluJb SINE Alu -14 298 1 844 221 35 0 chr17 6225217 6225389 -83279164 + MER45A DNA AcHobo 1 178 0 1627 98 31 9 chr17 6225721 6225946 -83278607 + MER30 DNA MER1_type 1 230 0 311 331 25 43 chr17 6226119 6226282 -83278271 + MIR SINE MIR 103 262 0 469 304 39 68 chr17 6227650 6227936 -83276617 - L1MEc LINE L1 -4923 1387 1109 2423 72 7 0 chr17 6227936 6228241 -83276312 - AluY SINE Alu -4 307 1 469 304 39 68 chr17 6228241 6228263 -83276290 - L1MEc LINE L1 -5201 1109 1088 383 295 65 11 chr17 6228266 6228527 -83276026 - L1MEc LINE L1 -5193 926 652 514 286 80 24 chr17 6228587 6228800 -83275753 + LTR33 LTR ERVL 297 521 0 215 261 43 14 chr17 6229304 6229373 -83275180 - L2 LINE L2 -3 3269 3199 * 667 310 47 5 chr17 6229367 6229580 -83274973 + MIR SINE MIR 5 226 -36 588 12 0 36 chr17 6229716 6229800 -83274753 + (TCTA)n Simple_repeat Simple_repeat 4 84 0 1807 179 0 11 chr17 6229801 6230086 -83274467 - AluJb SINE Alu -30 282 1 286 263 92 0 chr17 6230332 6230408 -83274145 + L2 LINE L2 3153 3235 -37 861 221 55 89 chr17 6230420 6230528 -83274025 + L1MC5 LINE L1 7485 7595 -400 1949 136 0 14 chr17 6230528 6230815 -83273738 + AluSx SINE Alu 1 283 -29 225 65 0 0 chr17 6230815 6230846 -83273707 + (CAAAC)n Simple_repeat Simple_repeat 2 32 0 861 221 55 89 chr17 6230846 6231206 -83273347 + L1MC5 LINE L1 7593 7990 -5 1299 198 55 26 chr17 6231849 6232122 -83272431 + AluJb SINE Alu 1 281 -31 189 0 0 0 chr17 6232122 6232143 -83272410 + (T)n Simple_repeat Simple_repeat 1 21 0 2002 150 3 25 chr17 6232646 6232960 -83271593 + AluJo SINE Alu 1 307 -5 559 347 96 20 chr17 6232977 6233467 -83271086 + L2 LINE L2 2373 2899 -415 * 962 105 18 78 chr17 6233453 6233509 -83271044 - MER5A DNA MER1_type -4 185 127 2418 82 0 0 chr17 6233509 6233801 -83270752 + AluSg SINE Alu 1 292 -18 962 105 18 78 chr17 6233801 6233938 -83270615 - MER5A DNA MER1_type -62 127 5 792 248 174 20 chr17 6233937 6234288 -83270265 + L2 LINE L2 2868 3272 0 * 182 146 0 24 chr17 6234486 6234527 -83270026 + (ATGGTG)n Simple_repeat Simple_repeat 6 45 0 2344 117 0 0 chr17 6234708 6235016 -83269537 - AluSg SINE Alu -2 308 1 1288 124 0 0 chr17 6235016 6235193 -83269360 - AluY SINE Alu -8 303 127 982 236 99 16 chr17 6235613 6235935 -83268618 - LTR16A LTR ERVL -4 446 98 593 284 119 35 chr17 6236900 6237294 -83267259 + L2 LINE L2 2862 3288 -25 246 62 0 0 chr17 6237295 6237327 -83267226 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 25 31 0 0 chr17 6237431 6237463 -83267090 + AT_rich Low_complexity Low_complexity 1 32 0 2066 101 40 4 chr17 6237463 6237740 -83266813 - AluSx SINE Alu -25 287 1 528 200 83 0 chr17 6237758 6237878 -83266675 - MIR SINE MIR -72 190 61 233 167 0 0 chr17 6238475 6238523 -83266030 - Alu SINE Alu -1 165 118 * 352 62 0 0 chr17 6238520 6238568 -83265985 - Alu SINE Alu -255 48 1 676 284 80 12 chr17 6238588 6238912 -83265641 + L1MC4a LINE L1 5591 5936 -1872 395 301 52 39 chr17 6239096 6239249 -83265304 + MIR SINE MIR 6 160 -48 2040 146 0 3 chr17 6239610 6239911 -83264642 - AluSx SINE Alu -7 305 6 189 211 79 0 chr17 6240095 6240133 -83264420 - MIR SINE MIR -77 185 145 786 273 86 49 chr17 6240768 6241284 -83263269 + L2 LINE L2 2702 3231 -82 557 137 16 24 chr17 6241284 6241408 -83263145 + CT-rich Low_complexity Low_complexity 1 123 0 2332 92 0 0 chr17 6241408 6241700 -83262853 - AluSx SINE Alu -20 292 1 354 296 11 11 chr17 6241700 6241788 -83262765 + L2 LINE L2 3226 3313 0 202 291 52 92 chr17 6241904 6242155 -83262398 - L2 LINE L2 -384 2930 2690 652 105 0 0 chr17 6242158 6242244 -83262309 + AluSg/x SINE Alu 212 297 -12 3060 250 99 44 chr17 6242451 6243354 -83261199 + MER45C DNA AcHobo 2 953 0 760 226 0 0 chr17 6243737 6243874 -83260679 + FRAM SINE Alu 5 141 -35 914 111 0 16 chr17 6243893 6244136 -83260417 + (CA)n Simple_repeat Simple_repeat 1 239 0 409 337 50 42 chr17 6244639 6244889 -83259664 + MIR SINE MIR 3 253 -9 600 214 16 8 chr17 6245201 6245376 -83259177 + L1MA9 LINE L1 5874 6056 -244 265 203 72 0 chr17 6245590 6245659 -83258894 + MIR SINE MIR 49 122 -86 215 143 0 120 chr17 6245677 6245810 -83258743 + (CATA)n Simple_repeat Simple_repeat 3 119 0 319 393 62 5 chr17 6245822 6246033 -83258520 - MIR SINE MIR -9 253 31 1228 319 162 30 chr17 6246444 6247476 -83257077 + L2 LINE L2 959 2126 -1188 6146 212 44 66 chr17 6247518 6247848 -83256705 - L1M4 LINE L1 -1495 4651 4315 1916 155 3 7 chr17 6247848 6248151 -83256402 - AluJb SINE Alu -10 302 1 6146 212 44 66 chr17 6248151 6249424 -83255129 - L1M4 LINE L1 -1831 4315 3015 5176 138 26 20 chr17 6249424 6250328 -83254225 - L1MC1 LINE L1 0 6333 5424 6146 212 44 66 chr17 6250328 6250349 -83254204 - L1M4 LINE L1 -3131 3015 2995 1598 203 3 20 chr17 6250349 6250644 -83253909 - AluJo SINE Alu -22 290 1 6146 212 44 66 chr17 6250644 6250977 -83253576 - L1M4 LINE L1 -3151 2995 2736 1085 300 67 81 chr17 6251012 6251785 -83252768 + L2 LINE L2 2294 3051 -221 242 283 103 48 chr17 6252327 6252472 -83252081 + L2 LINE L2 3120 3272 -41 34 42 0 0 chr17 6252497 6252545 -83252008 + AT_rich Low_complexity Low_complexity 1 48 0 1625 178 7 4 chr17 6253309 6253584 -83250969 + AluJo SINE Alu 1 276 -36 351 0 0 0 chr17 6253587 6253626 -83250927 + (CA)n Simple_repeat Simple_repeat 1 39 0 21 0 0 0 chr17 6253753 6253774 -83250779 + AT_rich Low_complexity Low_complexity 1 21 0 349 316 15 7 chr17 6254239 6254375 -83250178 + L1ME4a LINE L1 5712 5848 -273 1982 121 4 4 chr17 6254385 6254658 -83249895 + AluSx SINE Alu 6 278 -34 192 40 0 0 chr17 6254658 6254683 -83249870 + (TCTCTG)n Simple_repeat Simple_repeat 4 28 0 423 0 0 0 chr17 6254685 6254732 -83249821 + (CA)n Simple_repeat Simple_repeat 2 48 0 1819 184 0 13 chr17 6254737 6255053 -83249500 + AluJb SINE Alu 1 312 0 1929 98 11 11 chr17 6255196 6255462 -83249091 - AluSq SINE Alu -15 298 33 314 115 0 0 chr17 6255913 6255974 -83248579 - AluJo SINE Alu -1 301 241 966 194 0 22 chr17 6255974 6256154 -83248399 - AluJo SINE Alu -136 176 1 445 276 104 27 chr17 6256810 6257031 -83247522 - MIR SINE MIR -12 250 13 462 231 56 0 chr17 6258146 6258254 -83246299 - MER81 DNA DNA 0 114 1 2093 95 14 11 chr17 6258998 6259282 -83245271 - AluSq SINE Alu -28 285 1 1989 156 0 7 chr17 6259356 6259664 -83244889 - AluSx SINE Alu -6 306 1 242 259 179 9 chr17 6259877 6259989 -83244564 + L2 LINE L2 3179 3309 -4 533 218 9 9 chr17 6262617 6262727 -83241826 - L2 LINE L2 -5 3308 3199 264 203 177 0 chr17 6262706 6262785 -83241768 + MIR SINE MIR 60 152 -56 * 503 277 100 4 chr17 6263001 6263232 -83241321 + LTR16C LTR ERVL 238 490 -1 2283 108 7 0 chr17 6263407 6263714 -83240839 - AluSq SINE Alu -4 309 1 2739 14 0 0 chr17 6263806 6264101 -83240452 - AluYb8 SINE Alu -23 295 1 312 281 16 16 chr17 6264931 6265052 -83239501 + L1PA12 LINE L1 2182 2302 -5279 5320 200 15 17 chr17 6265090 6266386 -83238167 + L1PA15 LINE L1 1231 2522 -4275 29 0 0 0 chr17 6266391 6266420 -83238133 + AT_rich Low_complexity Low_complexity 1 29 0 6456 124 30 2 chr17 6266420 6267084 -83237469 - L1MA1 LINE L1 -4 7717 7073 2515 90 0 0 chr17 6267084 6267395 -83237158 - AluY SINE Alu 0 311 1 6456 124 30 2 chr17 6267395 6268008 -83236545 - L1MA1 LINE L1 -648 7073 6403 * 11452 139 34 13 chr17 6267999 6271353 -83233200 - L1MA1 LINE L1 -2457 5108 1684 * 12471 220 84 12 chr17 6271352 6274567 -83229986 + L1PA15 LINE L1 2507 5984 -832 1975 136 31 3 chr17 6274567 6274861 -83229692 + AluSx SINE Alu 1 302 -10 12471 220 84 12 chr17 6274861 6274963 -83229590 + L1PA15 LINE L1 5984 6077 -739 40822 55 6 3 chr17 6274964 6276789 -83227764 + L1PA5 LINE L1 2 1820 -4334 2416 88 0 10 chr17 6276789 6277094 -83227459 - AluY SINE Alu -8 303 2 40822 55 6 3 chr17 6277094 6281401 -83223152 + L1PA5 LINE L1 1820 6152 -2 336 223 0 8 chr17 6281401 6281492 -83223061 + MLT2B1 LTR ERVL 132 220 -177 4039 134 41 61 chr17 6281492 6282083 -83222470 + L1PA15 LINE L1 6064 6638 -178 2282 103 0 6 chr17 6282083 6282394 -83222159 + AluY SINE Alu 1 309 -2 4039 134 41 61 chr17 6282394 6282557 -83221996 + L1PA15 LINE L1 6638 6803 -13 287 146 0 0 chr17 6283066 6283121 -83221432 - L1PA16 LINE L1 -6 6160 6106 371 333 133 36 chr17 6283392 6283617 -83220936 + MIR SINE MIR 9 255 -7 193 218 18 18 chr17 6283662 6283717 -83220836 - MIR3 SINE MIR -144 64 10 183 238 200 25 chr17 6285176 6285256 -83219297 + MIR SINE MIR 33 126 -82 219 69 0 0 chr17 6285311 6285340 -83219213 + (CAG)n Simple_repeat Simple_repeat 1 29 0 713 266 119 5 chr17 6285352 6285570 -83218983 - MIR SINE MIR -13 249 7 204 224 0 20 chr17 6287409 6287458 -83217095 + MIR SINE MIR 104 145 -63 1633 117 51 40 chr17 6287495 6287768 -83216785 - AluSx SINE Alu -36 276 1 1422 249 56 56 chr17 6287952 6288502 -83216051 - MER21B LTR ERV1 -75 788 239 856 261 32 12 chr17 6288505 6288754 -83215799 + L2 LINE L2 2531 2784 -530 859 155 0 8 chr17 6288761 6288890 -83215663 + FLAM_C SINE Alu 6 133 -10 1920 119 25 21 chr17 6288904 6289189 -83215364 + AluSq SINE Alu 1 286 -27 216 0 0 0 chr17 6289202 6289226 -83215327 + (CAA)n Simple_repeat Simple_repeat 2 25 0 841 280 217 18 chr17 6289238 6289673 -83214880 + L2 LINE L2 2776 3295 -18 1915 203 48 42 chr17 6290727 6291229 -83213324 - LTR10B LTR ERV1 0 505 1 202 194 0 0 chr17 6291372 6291408 -83213145 + CT-rich Low_complexity Low_complexity 3 38 0 811 218 82 33 chr17 6291753 6291930 -83212623 - L1MD3 LINE L1 0 8042 7855 2055 129 3 28 chr17 6291930 6292247 -83212306 - AluSx SINE Alu -3 309 1 811 218 82 33 chr17 6292247 6292374 -83212179 - L1MD3 LINE L1 -187 7855 7736 453 316 16 61 chr17 6292597 6292930 -83211623 - L1MC4a LINE L1 -330 5912 5591 204 40 0 0 chr17 6293262 6293287 -83211266 + (TCCCC)n Simple_repeat Simple_repeat 3 27 0 2129 113 29 26 chr17 6293287 6293597 -83210956 - AluSx SINE Alu -1 311 1 250 291 47 12 chr17 6293678 6293764 -83210789 - MIR SINE MIR -48 214 126 490 284 41 50 chr17 6294024 6294242 -83210311 + L3b LINE CR1 1273 1488 -95 1706 169 7 36 chr17 6294589 6294890 -83209663 - AluJb SINE Alu -20 292 1 2389 82 0 0 chr17 6294951 6295245 -83209308 - AluSc SINE Alu -15 294 1 324 347 0 40 chr17 6295382 6295506 -83209047 + L2 LINE L2 3154 3272 0 286 282 59 0 chr17 6295920 6296005 -83208548 + L2 LINE L2 3204 3293 -20 223 335 52 31 chr17 6296754 6296945 -83207608 + L2 LINE L2 2563 2757 -557 563 341 90 34 chr17 6296987 6297398 -83207155 + L2 LINE L2 2831 3264 -8 814 252 113 76 chr17 6297588 6298076 -83206477 + LTR33A LTR ERVL 10 515 -8 2513 91 0 0 chr17 6298962 6299270 -83205283 - AluSg SINE Alu -2 308 1 382 273 89 99 chr17 6299378 6299792 -83204761 - L2 LINE L2 -18 3254 2845 420 266 75 44 chr17 6301260 6301451 -83203102 - MIR SINE MIR -67 141 3 21 0 0 0 chr17 6301581 6301602 -83202951 + AT_rich Low_complexity Low_complexity 1 21 0 803 245 135 5 chr17 6301729 6301937 -83202616 + MIR SINE MIR 28 262 0 365 296 106 30 chr17 6301949 6302148 -83202405 - L1ME1 LINE L1 -231 5935 5722 2405 87 3 7 chr17 6302472 6302781 -83201772 + AluSg SINE Alu 1 308 -2 588 205 111 8 chr17 6302877 6302994 -83201559 - MIR SINE MIR -71 191 63 228 35 0 0 chr17 6303403 6303432 -83201121 + (CAAAAA)n Simple_repeat Simple_repeat 3 31 0 254 239 43 123 chr17 6303765 6303928 -83200625 + L2 LINE L2 2935 3084 -188 335 355 8 0 chr17 6304209 6304330 -83200223 + L3 LINE CR1 695 816 -761 314 233 35 35 chr17 6304510 6304596 -83199957 + L2 LINE L2 3228 3313 0 2050 96 46 7 chr17 6304648 6304930 -83199623 - AluSq SINE Alu -20 293 1 266 324 185 0 chr17 6305117 6305225 -83199328 + L2 LINE L2 3143 3270 -2 2184 105 0 0 chr17 6305393 6305669 -83198884 - AluSx SINE Alu -36 276 1 188 316 161 19 chr17 6305785 6305940 -83198613 - L2 LINE L2 -2474 840 664 455 291 8 0 chr17 6306498 6306632 -83197921 - MLT1L LTR MaLR -5 610 476 311 279 36 18 chr17 6306782 6306893 -83197660 - MLT1L LTR MaLR -322 293 181 225 186 0 0 chr17 6306943 6306986 -83197567 - MLT1L LTR MaLR -431 184 142 2258 124 3 0 chr17 6307041 6307347 -83197206 - AluSx SINE Alu -5 307 1 549 209 51 19 chr17 6307347 6307505 -83197048 - MLT1H LTR MaLR -4 545 383 1936 160 3 22 chr17 6307742 6308055 -83196498 + AluJb SINE Alu 1 307 -5 306 252 66 18 chr17 6308374 6308499 -83196054 - MIR SINE MIR -47 161 33 195 250 75 25 chr17 6308656 6308736 -83195817 + L2 LINE L2 3191 3274 -39 416 368 16 11 chr17 6308785 6308975 -83195578 - MIR SINE MIR -70 192 2 2427 90 3 0 chr17 6309120 6309421 -83195132 - AluSp SINE Alu -11 302 1 477 248 58 82 chr17 6309426 6309470 -83195083 - MIR SINE MIR -49 213 169 1774 181 0 10 chr17 6309470 6309769 -83194784 + AluJo SINE Alu 1 296 -16 477 248 58 82 chr17 6309769 6309930 -83194623 - MIR SINE MIR -93 169 13 792 240 18 98 chr17 6311118 6311393 -83193160 - MIR SINE MIR -2 260 8 357 343 45 0 chr17 6311725 6311859 -83192694 + MIR3 SINE MIR 48 187 -21 390 292 171 31 chr17 6362087 6362443 -83142110 - L2 LINE L2 -6 3266 2861 339 283 297 0 chr17 6362452 6362590 -83141963 + MIR SINE MIR 48 226 -36 425 298 54 54 chr17 6363215 6363564 -83140989 - L2 LINE L2 -94 3178 2830 313 314 29 0 chr17 6363632 6363734 -83140819 + MIR SINE MIR 36 140 -68 760 285 170 16 chr17 6363766 6364078 -83140475 - L2 LINE L2 0 3313 2954 411 259 61 27 chr17 6364092 6364239 -83140314 - MIR SINE MIR -27 235 84 258 105 0 0 chr17 6364470 6364508 -83140045 + (TCTCCC)n Simple_repeat Simple_repeat 2 39 0 1968 134 25 0 chr17 6364508 6364792 -83139761 - AluJo SINE Alu -21 291 1 351 288 34 68 chr17 6364904 6365050 -83139503 - L1ME4a LINE L1 -14 6107 5967 329 131 321 36 chr17 6365160 6365244 -83139309 + AluJb SINE Alu 1 108 -194 198 264 94 0 chr17 6365653 6365706 -83138847 - MIR SINE MIR -99 163 106 775 261 61 8 chr17 6366798 6367043 -83137510 - MIR SINE MIR 0 262 5 1919 127 22 120 chr17 6367081 6367497 -83137056 + THE1C LTR MaLR 1 375 0 218 281 101 96 chr17 6368556 6368734 -83135819 + L3 LINE CR1 274 452 -1125 232 283 81 40 chr17 6368761 6368860 -83135693 - MIR SINE MIR -82 180 78 418 319 161 14 chr17 6368931 6369223 -83135330 + L3 LINE CR1 427 761 -816 199 188 0 0 chr17 6369268 6369300 -83135253 + MIR SINE MIR 76 107 -155 571 290 53 0 chr17 6369424 6369593 -83134960 + MIR SINE MIR 6 183 -79 696 306 107 31 chr17 6369746 6369858 -83134695 + L2 LINE L2 2722 2824 -489 5158 74 8 46 chr17 6369858 6370576 -83133977 + LTR8 LTR ERV1 1 691 0 696 306 107 31 chr17 6370576 6371015 -83133538 + L2 LINE L2 2824 3313 0 302 243 36 45 chr17 6372833 6372944 -83131609 - MIR SINE MIR -127 135 26 479 258 61 32 chr17 6373450 6373888 -83130665 + L1ME4a LINE L1 5562 6041 -80 1119 216 98 53 chr17 6374072 6374451 -83130102 + MSTD LTR MaLR 1 396 0 301 253 0 13 chr17 6375251 6375330 -83129223 + MER102a DNA MER1_type 249 326 -4 367 261 0 63 chr17 6375804 6375915 -83128638 - MIR SINE MIR -88 120 17 584 237 72 20 chr17 6376267 6376419 -83128134 + MIR SINE MIR 28 187 -75 202 122 122 0 chr17 6376547 6376588 -83127965 + MIR SINE MIR 176 221 -41 2189 105 0 3 chr17 6378738 6379024 -83125529 + AluSx SINE Alu 21 305 -7 328 277 109 25 chr17 6379665 6379784 -83124769 + MLT1I LTR MaLR 18 146 -263 369 211 58 19 chr17 6379943 6380047 -83124506 + MLT1G LTR MaLR 483 590 0 528 254 187 13 chr17 6380086 6380252 -83124301 - L1MC4a LINE L1 -552 5569 5622 1382 129 35 22 chr17 6380252 6380484 -83124069 - MER46A DNA MER2_type -1 235 1 528 254 187 13 chr17 6380484 6380627 -83123926 - L1MC4a LINE L1 -498 5623 5506 1016 238 75 42 chr17 6380729 6381005 -83123548 - MER113 DNA MER1_type? 0 521 227 1531 142 32 21 chr17 6381005 6381287 -83123266 - L1MA8 LINE L1 -1 6290 6006 1016 238 75 42 chr17 6381287 6381410 -83123143 - MER113 DNA MER1_type? -294 227 109 1944 210 83 19 chr17 6381431 6381685 -83122868 - L1MC4a LINE L1 0 7808 7572 2188 106 143 13 chr17 6381685 6382064 -83122489 + MSTA LTR MaLR 1 428 0 1944 210 83 19 chr17 6382064 6382276 -83122277 - L1MC4a LINE L1 -236 7572 7312 323 266 0 21 chr17 6383340 6383434 -83121119 - L2 LINE L2 -34 3279 3188 386 117 17 0 chr17 6383853 6383913 -83120640 - MSTB LTR MaLR 0 432 372 1339 112 32 5 chr17 6383913 6384101 -83120452 + AluSq SINE Alu 99 291 -22 1869 188 42 6 chr17 6384101 6384462 -83120091 - MSTB LTR MaLR -52 374 1 382 312 30 21 chr17 6384731 6384994 -83119559 + MLT1J2 LTR MaLR 109 435 -15 241 196 18 0 chr17 6385263 6385319 -83119234 - MIR SINE MIR -64 198 142 1151 179 0 28 chr17 6385327 6385539 -83119014 - AluJo SINE Alu -20 292 87 297 0 0 0 chr17 6385543 6385576 -83118977 + (TC)n Simple_repeat Simple_repeat 2 34 0 360 245 189 0 chr17 6385576 6385682 -83118871 - MIR SINE MIR -123 139 14 1027 268 97 76 chr17 6386407 6386771 -83117782 - MLT1G3 LTR MaLR -17 513 177 2261 110 0 0 chr17 6386771 6387079 -83117474 + AluSq SINE Alu 1 308 -5 1027 268 97 76 chr17 6387079 6387260 -83117293 - MLT1G3 LTR MaLR -353 177 1 288 261 31 39 chr17 6387359 6387489 -83117064 - LTR67 LTR ERVL 0 557 429 703 283 11 0 chr17 6387636 6387827 -83116726 + MIR SINE MIR 65 257 -5 2139 117 3 0 chr17 6387888 6388170 -83116383 - AluSx SINE Alu -25 287 5 196 203 85 51 chr17 6388206 6388265 -83116288 + L2 LINE L2 3211 3271 -1 2231 100 37 7 chr17 6388330 6388630 -83115923 - AluSp SINE Alu -4 309 1 1959 120 33 10 chr17 6388723 6388744 -83115809 - AluSq SINE Alu -6 307 288 1007 111 11 17 chr17 6388744 6388925 -83115628 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 1959 120 33 10 chr17 6388925 6389203 -83115350 - AluSq SINE Alu -25 288 1 2221 96 28 0 chr17 6391010 6391301 -83113252 + AluSc SINE Alu 1 299 -10 714 289 25 0 chr17 6391312 6391516 -83113037 - MIR SINE MIR -2 260 52 565 317 41 27 chr17 6391730 6391951 -83112602 - MIR SINE MIR -12 250 27 213 43 0 65 chr17 6391955 6392001 -83112552 + (TTTTC)n Simple_repeat Simple_repeat 4 46 0 2389 99 0 6 chr17 6392003 6392316 -83112237 - AluSq SINE Alu 0 313 3 5561 42 12 9 chr17 6392340 6393442 -83111111 - SVA Other Other -954 1386 5 224 0 0 111 chr17 6393446 6393509 -83111044 + (GGGAGA)n Simple_repeat Simple_repeat 6 61 0 235 326 117 13 chr17 6393720 6393959 -83110594 + L2 LINE L2 2155 2418 -896 420 289 29 40 chr17 6394199 6394372 -83110181 + MIR SINE MIR 84 254 -8 225 328 134 0 chr17 6394392 6394511 -83110042 + L2 LINE L2 2713 2847 -467 311 158 0 0 chr17 6394582 6394639 -83109914 - L1MA8 LINE L1 -26 6265 6209 6412 233 82 30 chr17 6394679 6394714 -83109839 + L1MEc LINE L1 234 266 -5949 1512 186 53 42 chr17 6394714 6395075 -83109478 - MLT1A1 LTR MaLR 0 365 1 6412 233 82 30 chr17 6395075 6397447 -83107106 + L1MEc LINE L1 266 2720 -3495 9041 92 14 9 chr17 6397464 6398673 -83105880 + HSMAR1 DNA Mariner 9 1223 -64 7332 155 9 13 chr17 6398673 6398715 -83105838 + L1PB1 LINE L1 3796 3837 -2314 2904 88 6 135 chr17 6398715 6399235 -83105318 + MLT2A2 LTR ERVL 1 453 0 7332 155 9 13 chr17 6399235 6401553 -83103000 + L1PB1 LINE L1 3837 6150 -1 586 89 0 0 chr17 6401560 6401639 -83102914 + HSMAR1 DNA Mariner 1208 1286 -1 2250 98 0 55 chr17 6403306 6403633 -83100920 + AluSg SINE Alu 1 309 -1 219 280 0 0 chr17 6404154 6404204 -83100349 + CT-rich Low_complexity Low_complexity 3 52 0 2366 95 0 3 chr17 6405571 6405877 -83098676 + AluY SINE Alu 4 308 -3 2825 75 5 3 chr17 6406322 6406698 -83097855 + L1PA8 LINE L1 5796 6172 0 2396 167 50 27 chr17 6406739 6407224 -83097329 + L1MB3 LINE L1 5688 6183 0 612 251 167 35 chr17 6407487 6407798 -83096755 - MLT1J LTR MaLR -43 468 117 234 208 0 19 chr17 6407823 6407876 -83096677 - MLT1L LTR MaLR -543 72 21 414 256 55 97 chr17 6407912 6408149 -83096404 + HAL1 LINE L1 1254 1466 -1041 2581 84 0 0 chr17 6408149 6408459 -83096094 + AluSx SINE Alu 1 310 -2 414 256 55 97 chr17 6408459 6408655 -83095898 + HAL1 LINE L1 1466 1669 -838 1579 221 42 32 chr17 6408830 6409008 -83095545 - L1M4 LINE L1 -824 5322 5147 2466 56 0 37 chr17 6409008 6409329 -83095224 - AluY SINE Alu -2 309 1 1579 221 42 32 chr17 6409329 6409584 -83094969 - L1M4 LINE L1 -999 5147 4885 213 313 0 0 chr17 6409933 6410000 -83094553 + T-rich Low_complexity Low_complexity 1 67 0 2359 101 0 0 chr17 6410241 6410539 -83094014 + AluSx SINE Alu 1 298 -14 893 145 7 14 chr17 6410674 6410819 -83093734 + AluJo SINE Alu 88 231 -81 186 143 0 0 chr17 6410821 6410856 -83093697 + (A)n Simple_repeat Simple_repeat 1 35 0 578 321 86 45 chr17 6410962 6411187 -83093366 + L1MEc LINE L1 2152 2366 -3849 2027 131 0 39 chr17 6411187 6411499 -83093054 + AluSg SINE Alu 3 302 -8 578 321 86 45 chr17 6411499 6411742 -83092811 + L1MEc LINE L1 2366 2599 -3616 246 270 63 46 chr17 6412122 6412296 -83092257 + L1MEc LINE L1 2942 3118 -3097 396 322 7 20 chr17 6412534 6412683 -83091870 + MER5B DNA MER1_type 1 147 -31 524 293 104 30 chr17 6412700 6413257 -83091296 + L1M4 LINE L1 4131 4752 -1394 2084 150 3 15 chr17 6413257 6413598 -83090955 - MER1B DNA MER1_type 0 337 1 524 293 104 30 chr17 6413598 6413742 -83090811 + L1M4 LINE L1 4752 4884 -1262 780 268 91 78 chr17 6413762 6414259 -83090294 - MLT1J LTR MaLR 0 511 9 604 126 84 8 chr17 6414570 6414689 -83089864 + MER53 DNA DNA 1 128 -61 447 19 0 0 chr17 6414692 6414744 -83089809 + (CATA)n Simple_repeat Simple_repeat 3 54 0 6255 56 13 0 chr17 6415468 6416238 -83088315 - L1PA8A LINE L1 -28 6103 5324 2028 134 16 7 chr17 6417492 6417799 -83086754 - AluSg SINE Alu 0 310 1 312 244 81 81 chr17 6418184 6418231 -83086322 + L2 LINE L2 3117 3163 -150 2118 112 3 7 chr17 6418231 6418541 -83086012 - AluSx SINE Alu 0 309 1 312 244 81 81 chr17 6418541 6418689 -83085864 + L2 LINE L2 3162 3313 0 730 318 39 33 chr17 6418755 6419092 -83085461 - MLT1I LTR MaLR 0 409 71 658 147 104 61 chr17 6419354 6419373 -83085180 + MER21A LTR ERV1 6 23 -908 365 0 22 0 chr17 6419373 6419418 -83085135 + (TAGA)n Simple_repeat Simple_repeat 4 49 0 658 147 104 61 chr17 6419418 6419561 -83084992 + MER21A LTR ERV1 23 175 -756 * 2200 161 116 9 chr17 6419550 6419990 -83084563 + MER21B LTR ERV1 377 863 0 1995 106 0 15 chr17 6420251 6420524 -83084029 - AluSx SINE Alu -43 269 1 2215 110 3 49 chr17 6420861 6421188 -83083365 + AluSx SINE Alu 1 312 0 1293 171 38 46 chr17 6421581 6421844 -83082709 - AluJo SINE Alu -10 302 42 330 338 30 0 chr17 6422410 6422543 -83082010 - L3 LINE CR1 -1 1576 1440 450 301 12 18 chr17 6422566 6422729 -83081824 + MIR SINE MIR 90 251 -11 1311 105 6 0 chr17 6422856 6423027 -83081526 - AluSp SINE Alu -8 305 134 2449 89 0 10 chr17 6423027 6423341 -83081212 - AluSx SINE Alu -1 311 1 22 70 0 0 chr17 6423957 6424000 -83080553 + AT_rich Low_complexity Low_complexity 1 43 0 2314 80 0 48 chr17 6424337 6424651 -83079902 - AluSx SINE Alu -13 299 1 337 284 7 47 chr17 6424651 6424788 -83079765 + CT-rich Low_complexity Low_complexity 13 145 0 185 260 13 0 chr17 6424958 6425035 -83079518 + C-rich Low_complexity Low_complexity 4 81 0 290 274 32 19 chr17 6425045 6425202 -83079351 + (TCTCTG)n Simple_repeat Simple_repeat 3 161 0 180 111 0 0 chr17 6425213 6425240 -83079313 + (TCTCTG)n Simple_repeat Simple_repeat 2 28 0 1344 219 61 32 chr17 6426535 6427192 -83077361 - L1MD1 LINE L1 0 7995 7358 2182 114 3 0 chr17 6427192 6427490 -83077063 - AluSx SINE Alu -13 299 1 1344 219 61 32 chr17 6427490 6427706 -83076847 - L1MD1 LINE L1 -637 7358 6079 318 50 0 0 chr17 6427732 6427772 -83076781 + (TA)n Simple_repeat Simple_repeat 1 40 0 467 259 121 30 chr17 6428223 6428455 -83076098 + MLT1K LTR MaLR 329 581 -7 400 250 125 60 chr17 6428607 6428775 -83075778 + MIR SINE MIR 28 206 -56 1069 210 0 14 chr17 6429399 6429618 -83074935 - MER20 DNA MER1_type 0 219 4 609 266 27 23 chr17 6429623 6429812 -83074741 + MIR SINE MIR 1 197 -63 476 186 29 10 chr17 6429866 6429968 -83074585 + L2 LINE L2 3151 3254 -18 2545 77 3 0 chr17 6430578 6430889 -83073664 + AluSx SINE Alu 1 312 0 710 174 45 50 chr17 6431447 6431648 -83072905 + LTR45 LTR ERV1 326 525 0 331 346 78 7 chr17 6431798 6431951 -83072602 + L2 LINE L2 2562 2725 -589 365 314 129 16 chr17 6431974 6432292 -83072261 + L1ME4a LINE L1 5697 6050 -71 2287 95 7 3 chr17 6432443 6432737 -83071816 - AluSg SINE Alu -15 295 1 970 221 101 4 chr17 6432779 6433055 -83071498 - LTR16C LTR ERVL 0 491 189 2173 96 34 10 chr17 6433190 6433483 -83071070 + AluSx SINE Alu 1 300 -12 213 303 81 0 chr17 6433503 6433602 -83070951 + MIR SINE MIR 86 192 -70 324 0 0 0 chr17 6433606 6433642 -83070911 + (TG)n Simple_repeat Simple_repeat 2 37 0 379 141 13 51 chr17 6433644 6433722 -83070831 + MLT1A2 LTR MaLR 4 78 -296 1064 170 5 25 chr17 6433739 6433939 -83070614 + MLT1A2 LTR MaLR 179 374 0 699 186 9 0 chr17 6434385 6434498 -83070055 - MER81 DNA DNA 0 114 1 546 273 142 24 chr17 6436201 6436490 -83068063 + MLT1K LTR MaLR 17 339 -249 2067 127 0 3 chr17 6436949 6437264 -83067289 - AluSg SINE Alu 0 314 1 264 291 22 15 chr17 6438182 6438316 -83066237 + (TGGA)n Simple_repeat Simple_repeat 1 135 0 2323 96 3 0 chr17 6439487 6439779 -83064774 - AluSc SINE Alu -16 293 1 901 219 29 15 chr17 6439794 6439825 -83064728 - L1MA1 LINE L1 -380 5800 5771 1774 202 16 26 chr17 6439825 6440202 -83064351 - L1MB5 LINE L1 -8 6166 5794 4883 33 0 3 chr17 6440203 6440779 -83063774 + L1PA8 LINE L1 5594 6167 -5 901 219 29 15 chr17 6440779 6440995 -83063558 - L1MA1 LINE L1 -408 5772 5582 401 342 58 52 chr17 6440998 6441346 -83063207 + L2 LINE L2 2879 3228 -44 220 218 23 0 chr17 6441854 6441941 -83062612 + GA-rich Low_complexity Low_complexity 1 89 0 261 277 26 26 chr17 6442047 6442202 -83062351 + (CAGAGA)n Simple_repeat Simple_repeat 6 160 0 466 283 50 13 chr17 6442326 6442485 -83062068 - MIR SINE MIR -81 181 17 5996 146 105 89 chr17 6442559 6444228 -83060325 + pTR5 LTR ERV1 743 2438 0 2163 99 0 55 chr17 6444700 6445012 -83059541 + AluSc SINE Alu 6 300 -9 419 185 260 27 chr17 6445098 6445244 -83059309 + L2 LINE L2 3134 3313 0 205 319 104 0 chr17 6445375 6445510 -83059043 - L2 LINE L2 -560 2754 2606 361 133 0 80 chr17 6446067 6446180 -83058373 + (CCCCCA)n Simple_repeat Simple_repeat 2 105 0 347 310 161 35 chr17 6446609 6446957 -83057596 + L2 LINE L2 2873 3264 -8 252 246 35 70 chr17 6446971 6447085 -83057468 + MIR SINE MIR 29 138 -70 1017 259 17 4 chr17 6447160 6447399 -83057154 - MIR SINE MIR -10 252 11 626 246 191 5 chr17 6447422 6447621 -83056932 - MIR SINE MIR -7 255 20 252 402 0 9 chr17 6447639 6447746 -83056807 - MIR3 SINE MIR -54 154 49 629 253 69 35 chr17 6447885 6448207 -83056346 - MLT1H LTR MaLR -235 336 14 2371 94 7 0 chr17 6448217 6448516 -83056037 + AluSx SINE Alu 1 301 -11 2137 150 36 85 chr17 6449334 6449922 -83054631 + L1MB3 LINE L1 5625 6183 0 2402 98 0 3 chr17 6450619 6450924 -83053629 + AluSq SINE Alu 2 305 -8 182 333 65 36 chr17 6451251 6451352 -83053201 - MIR SINE MIR -23 239 131 2130 119 0 13 chr17 6451352 6451655 -83052898 + AluSx SINE Alu 1 299 -13 182 333 65 36 chr17 6451655 6451691 -83052862 - MIR SINE MIR -131 131 98 264 323 58 35 chr17 6451776 6452002 -83052551 - L2 LINE L2 -533 2781 2551 260 213 38 12 chr17 6452447 6452527 -83052026 + GA-rich Low_complexity Low_complexity 3 84 0 204 294 0 74 chr17 6453187 6453350 -83051203 + G-rich Low_complexity Low_complexity 12 162 0 344 333 108 5 chr17 6453554 6453740 -83050813 - MIR SINE MIR 0 262 58 2223 95 4 0 chr17 6453970 6454243 -83050310 - AluSx SINE Alu -38 274 1 796 191 114 64 chr17 6454516 6454736 -83049817 - MLT1D LTR MaLR 0 505 275 2556 206 36 10 chr17 6454819 6455405 -83049148 - MLT1H-int LTR MaLR -770 601 1 1736 217 2 42 chr17 6455407 6455817 -83048736 - MLT2C1 LTR ERVL -2 395 2 293 194 108 21 chr17 6456057 6456150 -83048403 - MLT1H LTR MaLR -13 536 436 439 282 161 10 chr17 6458525 6458802 -83045751 + MIR SINE MIR 4 252 -10 198 103 0 0 chr17 6458812 6458841 -83045712 + (CAT)n Simple_repeat Simple_repeat 2 30 0 31 44 0 0 chr17 6459032 6459077 -83045476 + AT_rich Low_complexity Low_complexity 1 45 0 185 284 123 25 chr17 6459118 6459199 -83045354 - MIR3 SINE MIR -33 175 87 1683 162 65 0 chr17 6459254 6459413 -83045140 - AluJo SINE Alu -11 301 154 194 88 0 29 chr17 6459413 6459447 -83045106 + (TTA)n Simple_repeat Simple_repeat 1 33 0 1683 162 65 0 chr17 6459447 6459565 -83044988 - AluJo SINE Alu -158 154 6 551 318 90 0 chr17 6459834 6460067 -83044486 - MIR SINE MIR -8 254 1 243 218 35 103 chr17 6460195 6460270 -83044283 + L2 LINE L2 3229 3299 -14 186 103 0 0 chr17 6460270 6460299 -83044254 + (TGAA)n Simple_repeat Simple_repeat 1 29 0 243 218 35 103 chr17 6460299 6460310 -83044243 + L2 LINE L2 3299 3309 -4 2356 92 0 13 chr17 6460394 6460700 -83043853 + AluSx SINE Alu 1 302 -10 182 262 0 49 chr17 6460797 6460858 -83043695 - L2 LINE L2 -531 2783 2726 447 220 148 99 chr17 6462071 6462416 -83042137 + LTR33 LTR ERVL 2 363 -158 1102 285 103 14 chr17 6464226 6464664 -83039889 - L2 LINE L2 -8 3305 2829 219 250 88 15 chr17 6464897 6464965 -83039588 - L2 LINE L2 -23 3249 3177 291 315 33 0 chr17 6465329 6465421 -83039132 - MIR SINE MIR -78 184 90 546 279 85 5 chr17 6465425 6465626 -83038927 + LTR50 LTR ERVL 3 219 -576 406 295 179 0 chr17 6466674 6466847 -83037706 + MIR SINE MIR 58 261 -1 294 296 208 0 chr17 6466972 6467097 -83037456 + MIR SINE MIR 110 260 -2 934 356 59 41 chr17 6467161 6467741 -83036812 - L3 LINE CR1 -194 1383 788 2184 120 30 0 chr17 6467741 6468041 -83036512 - AluSx SINE Alu -3 309 1 934 356 59 41 chr17 6468041 6468125 -83036428 - L3 LINE CR1 -789 788 707 267 280 40 64 chr17 6468142 6468267 -83036286 - MIR SINE MIR -57 151 30 306 281 0 158 chr17 6468269 6468370 -83036183 - L3 LINE CR1 -4 1573 1536 1882 172 33 0 chr17 6468370 6468672 -83035881 - AluJo SINE Alu 0 312 1 306 281 0 158 chr17 6468672 6468830 -83035723 - L3 LINE CR1 -41 1536 1355 856 233 31 54 chr17 6469429 6469652 -83034901 + MER20 DNA MER1_type 2 219 0 573 222 50 61 chr17 6470337 6470535 -83034018 + MER63A DNA MER1_type 1 196 -14 520 190 12 104 chr17 6471467 6471630 -83032923 - MER58C DNA MER1_type -1 214 67 24 0 0 0 chr17 6472602 6472626 -83031927 + AT_rich Low_complexity Low_complexity 1 24 0 297 0 0 0 chr17 6472626 6472659 -83031894 + (TTA)n Simple_repeat Simple_repeat 2 34 0 2114 99 7 7 chr17 6472662 6472944 -83031609 - AluSx SINE Alu -30 282 1 263 349 23 0 chr17 6473876 6473962 -83030591 + L2 LINE L2 2686 2773 -541 479 167 9 0 chr17 6474021 6474135 -83030418 + (CA)n Simple_repeat Simple_repeat 1 115 0 374 225 101 76 chr17 6474483 6474825 -83029728 + L1MC4a LINE L1 5601 5824 -297 1721 179 32 32 chr17 6474972 6475414 -83029139 - L1MDa LINE L1 -4870 1670 1229 1018 164 11 91 chr17 6475427 6475690 -83028863 - L1MB8 LINE L1 -1 6177 5936 748 211 9 72 chr17 6475689 6475794 -83028759 - L1MDa LINE L1 -5306 1234 1149 * 2450 175 38 9 chr17 6475794 6476246 -83028307 - MLT1C LTR MaLR 0 467 3 748 211 9 72 chr17 6476246 6476363 -83028190 - L1MDa LINE L1 -5391 1149 1026 1490 181 199 6 chr17 6476363 6476530 -83028023 - MSTD LTR MaLR 0 396 263 186 43 0 0 chr17 6476530 6476553 -83028000 + (GA)n Simple_repeat Simple_repeat 2 24 0 1490 181 199 6 chr17 6476553 6476716 -83027837 - MSTD LTR MaLR -133 263 2 2000 231 87 57 chr17 6476716 6477529 -83027024 - L1MDa LINE L1 -5509 1031 23 440 308 21 12 chr17 6477560 6477751 -83026802 - L1 LINE L1 -2281 3865 3668 219 114 0 0 chr17 6478022 6478057 -83026496 + (T)n Simple_repeat Simple_repeat 1 35 0 578 320 119 50 chr17 6478188 6478826 -83025727 - L1 LINE L1 -2764 3382 2701 221 240 0 0 chr17 6479113 6479163 -83025390 + GA-rich Low_complexity Low_complexity 2 51 0 1753 120 0 0 chr17 6479386 6479636 -83024917 - AluSc SINE Alu -5 304 55 947 264 28 0 chr17 6480124 6480336 -83024217 + MIR SINE MIR 45 262 0 1567 169 196 88 chr17 6480816 6481347 -83023206 + LTR4 LTR ERV1 1 588 0 2086 259 87 32 chr17 6481802 6482185 -83022368 - HAL1 LINE L1 0 2507 2146 2010 154 3 0 chr17 6482185 6482491 -83022062 - AluSx SINE Alu -5 307 1 2086 259 87 32 chr17 6482491 6483004 -83021549 - HAL1 LINE L1 -361 2146 1562 1860 257 174 38 chr17 6483000 6483288 -83021265 - HAL1 LINE L1 -1165 1342 1095 * 2059 119 3 3 chr17 6483288 6483581 -83020972 - AluSc SINE Alu -16 293 1 1860 257 174 38 chr17 6483581 6483612 -83020941 - HAL1 LINE L1 -1412 1095 1070 3510 108 61 34 chr17 6483612 6483915 -83020638 + MER4B LTR ERV1 1 294 -316 2289 95 0 0 chr17 6483915 6484219 -83020334 - AluY SINE Alu -7 304 1 3510 108 61 34 chr17 6484219 6484509 -83020044 + MER4B LTR ERV1 294 610 0 1860 257 174 38 chr17 6484509 6485362 -83019191 - HAL1 LINE L1 -1437 1070 9 587 256 103 91 chr17 6485362 6485431 -83019122 - L1ME4a LINE L1 -3 6118 6051 2104 112 0 0 chr17 6485431 6485718 -83018835 + AluSx SINE Alu 26 312 0 587 256 103 91 chr17 6485718 6485934 -83018619 - L1ME4a LINE L1 -70 6051 5824 2284 82 3 0 chr17 6485934 6486228 -83018325 + AluSp SINE Alu 1 295 -18 587 256 103 91 chr17 6486228 6486359 -83018194 - L1ME4a LINE L1 -297 5824 5696 319 149 104 15 chr17 6486371 6486438 -83018115 + MER5B DNA MER1_type 72 144 -34 281 322 114 31 chr17 6486455 6486744 -83017809 - L1ME4a LINE L1 -2150 5658 5346 207 0 0 0 chr17 6487021 6487044 -83017509 + (CTG)n Simple_repeat Simple_repeat 2 24 0 2165 110 7 0 chr17 6487360 6487661 -83016892 - AluSx SINE Alu -9 303 1 797 216 42 6 chr17 6487914 6488081 -83016472 + MER5B DNA MER1_type 5 177 -1 343 217 250 0 chr17 6489016 6489136 -83015417 + MER5A DNA MER1_type 13 162 -27 528 223 54 34 chr17 6489142 6489290 -83015263 - MIR SINE MIR -110 152 2 228 274 81 40 chr17 6489389 6489513 -83015040 - L2 LINE L2 -212 3060 2932 1421 181 48 15 chr17 6490006 6490468 -83014085 - MER92B LTR ERV1 -2 552 1 401 263 54 70 chr17 6490844 6491030 -83013523 + MER5A DNA MER1_type 1 183 -6 * 425 289 58 28 chr17 6491018 6491339 -83013214 - L2 LINE L2 -215 3057 2727 433 333 88 5 chr17 6492527 6492743 -83011810 + L3 LINE CR1 1344 1577 0 368 261 185 0 chr17 6493257 6493376 -83011177 - MIR SINE MIR -5 257 117 3222 141 49 37 chr17 6493909 6494483 -83010070 - LTR1 LTR ERV1 -2 783 203 885 98 0 0 chr17 6494536 6494658 -83009895 - AluSq SINE Alu -13 300 179 676 91 0 0 chr17 6494658 6494746 -83009807 - AluSq SINE Alu -218 95 8 1101 93 115 11 chr17 6494746 6494928 -83009625 - LTR1 LTR ERV1 -584 201 1 299 196 22 76 chr17 6494990 6495048 -83009505 + HAL1 LINE L1 2409 2462 -45 1738 166 0 20 chr17 6495048 6495349 -83009204 - AluJo SINE Alu -17 295 1 299 196 22 76 chr17 6495349 6495382 -83009171 + HAL1 LINE L1 2462 2495 -12 1595 113 13 0 chr17 6495598 6495829 -83008724 - AluY SINE Alu -5 306 73 859 215 80 52 chr17 6496306 6496557 -83007996 + MIR SINE MIR 5 262 0 294 277 175 15 chr17 6496866 6497003 -83007550 - MER5A DNA MER1_type 0 189 31 2211 268 32 35 chr17 6498493 6499237 -83005316 + L1ME LINE L1 13 754 -5316 1733 15 0 0 chr17 6499341 6499538 -83005015 - L1P LINE L1 -1040 5106 4910 12060 26 1 2 chr17 6499538 6500947 -83003606 + L1P LINE L1 3515 4921 -1225 1645 113 41 15 chr17 6501066 6501141 -83003412 - L1PB3 LINE L1 -286 5868 5796 216 0 0 0 chr17 6501141 6501165 -83003388 + (CA)n Simple_repeat Simple_repeat 2 25 0 1645 113 41 15 chr17 6501165 6501355 -83003198 - L1PB3 LINE L1 -358 5796 5596 347 227 35 35 chr17 6501464 6501605 -83002948 - L1M4 LINE L1 -1481 4665 4525 991 265 0 0 chr17 6501741 6501964 -83002589 - MER58A DNA MER1_type 0 224 2 7965 17 0 4 chr17 6502071 6503097 -83001456 - L1PA3 LINE L1 -3 6152 5127 513 261 8 39 chr17 6503290 6503420 -83001133 - L2 LINE L2 -4 3309 3184 876 123 0 0 chr17 6503504 6503626 -83000927 + AluSq/x SINE Alu 14 135 -177 2125 132 0 0 chr17 6503626 6503936 -83000617 + AluSx SINE Alu 1 310 -2 2990 136 6 6 chr17 6503956 6504441 -83000112 + L1PA16 LINE L1 5682 6166 0 301 345 18 30 chr17 6504472 6504640 -82999913 - L2 LINE L2 -260 3053 2888 1832 164 59 0 chr17 6504791 6505114 -82999439 - MER54B LTR ERVL -451 342 1 199 265 61 10 chr17 6505167 6505265 -82999288 + L2 LINE L2 2853 2955 -317 233 271 0 12 chr17 6505692 6505777 -82998776 + GA-rich Low_complexity Low_complexity 1 84 0 384 326 98 36 chr17 6505779 6506601 -82997952 - L2 LINE L2 -82 3190 2316 302 336 18 0 chr17 6507870 6507983 -82996570 + MIR SINE MIR 34 148 -114 308 238 12 12 chr17 6508198 6508278 -82996275 + MIR SINE MIR 70 149 -113 2222 95 0 7 chr17 6508297 6508601 -82995952 - AluSg1 SINE Alu -7 302 1 1632 167 7 23 chr17 6508636 6508935 -82995618 + AluJb SINE Alu 1 294 -18 1288 237 219 9 chr17 6508950 6509406 -82995147 + L1MC4a LINE L1 7252 7803 -5 21 36 0 0 chr17 6509406 6509434 -82995119 + AT_rich Low_complexity Low_complexity 1 28 0 260 238 71 79 chr17 6510626 6510752 -82993801 + MIR SINE MIR 1 129 -79 292 271 12 12 chr17 6510944 6511029 -82993524 - L2 LINE L2 -31 3282 3198 688 271 52 49 chr17 6511200 6511548 -82993005 - L1MC/D LINE L1 -452 5669 5334 1670 141 65 3 chr17 6511648 6511938 -82992615 + AluSx SINE Alu 1 308 -4 3088 190 75 35 chr17 6513155 6513428 -82991125 - L1MB7 LINE L1 0 6184 5923 2430 50 3 0 chr17 6513428 6513729 -82990824 + AluY SINE Alu 1 302 -9 3088 190 75 35 chr17 6513729 6514232 -82990321 - L1MB7 LINE L1 -261 5923 5377 260 299 171 17 chr17 6514318 6514552 -82990001 - L1MC/D LINE L1 -1927 5881 5612 350 304 28 112 chr17 6514653 6514797 -82989756 + L3 LINE CR1 1381 1503 -74 2124 95 0 14 chr17 6514797 6515092 -82989461 - AluSx SINE Alu -19 293 3 350 304 28 112 chr17 6515092 6515161 -82989392 + L3 LINE CR1 1503 1576 -1 885 63 0 0 chr17 6515966 6516077 -82988476 - AluSc SINE Alu -10 299 189 2181 109 0 0 chr17 6516077 6516380 -82988173 + AluSg SINE Alu 3 305 -5 650 189 43 113 chr17 6516449 6516634 -82987919 + MER5B DNA MER1_type 7 178 0 270 282 13 0 chr17 6517149 6517227 -82987326 + MIR SINE MIR 57 135 -73 252 329 50 21 chr17 6517230 6517370 -82987183 - L3 LINE CR1 -137 1440 1297 2102 79 4 0 chr17 6517608 6517902 -82986651 + AluSx SINE Alu 16 310 0 602 298 124 3 chr17 6517971 6518330 -82986223 + L2 LINE L2 2623 3029 -284 1714 87 0 0 chr17 6518332 6518551 -82986002 - AluSg/x SINE Alu -19 293 75 395 119 0 0 chr17 6518552 6518611 -82985942 + AluS SINE Alu 5 63 -238 651 206 99 110 chr17 6518611 6518903 -82985650 + L2 LINE L2 3024 3312 -1 373 306 32 48 chr17 6518905 6519091 -82985462 + MIR SINE MIR 23 205 -57 2079 110 19 13 chr17 6519838 6520147 -82984406 - AluSx SINE Alu -1 311 1 681 214 146 89 chr17 6520157 6520493 -82984060 - L1ME3A LINE L1 0 6170 5816 238 195 110 0 chr17 6520862 6520944 -82983609 - L1ME LINE L1 -314 5856 5766 3764 122 14 4 chr17 6521045 6521595 -82982958 - LTR9B LTR ERV1 0 644 89 2204 71 10 3 chr17 6521595 6521892 -82982661 + AluY SINE Alu 1 299 -12 780 218 62 25 chr17 6521892 6522185 -82982368 - L1ME LINE L1 -639 5525 5224 421 322 105 34 chr17 6522242 6522570 -82981983 - L1ME LINE L1 -1276 4870 4531 1169 188 19 5 chr17 6523036 6523249 -82981304 - MER20 DNA MER1_type -3 216 1 556 294 84 33 chr17 6523550 6523849 -82980704 - MLT1K LTR MaLR 0 588 275 582 306 62 36 chr17 6524144 6524811 -82979742 - L1ME LINE L1 -2177 3969 3286 670 145 97 32 chr17 6525091 6525215 -82979338 + FLAM_C SINE Alu 1 132 -1 412 269 80 71 chr17 6526130 6526368 -82978185 - L1ME LINE L1 -3123 3023 2784 706 253 99 35 chr17 6526439 6526814 -82977739 - HAL1 LINE L1 -1012 1495 1097 1161 191 74 0 chr17 6526833 6527067 -82977486 + L1MB5 LINE L1 5858 6108 -66 460 290 52 72 chr17 6527167 6527322 -82977231 - HAL1 LINE L1 -1433 1074 917 23 33 0 0 chr17 6527322 6527352 -82977201 + AT_rich Low_complexity Low_complexity 1 30 0 460 290 52 72 chr17 6527352 6527376 -82977177 - HAL1 LINE L1 -1590 917 894 2712 167 105 8 chr17 6527376 6527890 -82976663 + MLT1F1 LTR MaLR 4 567 0 460 290 52 72 chr17 6527890 6528028 -82976525 - HAL1 LINE L1 -1613 894 734 2076 125 0 4 chr17 6528401 6528680 -82975873 - AluSx SINE Alu -34 278 1 2302 100 0 0 chr17 6528958 6529249 -82975304 - AluSg SINE Alu -19 291 1 1035 213 0 82 chr17 6529316 6529560 -82974993 - MER58A DNA MER1_type 0 224 1 449 250 91 0 chr17 6529592 6529724 -82974829 + L1MD2 LINE L1 6211 6354 -5 1096 76 0 0 chr17 6529775 6529906 -82974647 + AluSp SINE Alu 2 132 -181 2294 96 13 0 chr17 6529908 6530210 -82974343 + AluSp SINE Alu 1 306 -7 974 156 6 31 chr17 6530540 6530700 -82973853 - FRAM SINE Alu -18 158 3 347 261 17 34 chr17 6531131 6531250 -82973303 - L2 LINE L2 -11 3261 3145 2471 91 0 0 chr17 6531859 6532168 -82972385 + AluSg SINE Alu 1 309 -1 182 194 0 0 chr17 6532404 6532440 -82972113 - L2 LINE L2 0 3313 3278 689 248 143 24 chr17 6532566 6533006 -82971547 - L2 LINE L2 -71 3242 2741 2385 79 0 3 chr17 6533009 6533300 -82971253 + AluSq SINE Alu 1 290 -23 457 121 33 0 chr17 6533300 6533391 -82971162 + G-rich Low_complexity Low_complexity 2 95 0 533 206 99 110 chr17 6533577 6533869 -82970684 - L2 LINE L2 -1 3312 3024 443 129 0 0 chr17 6533869 6533931 -82970622 - AluS SINE Alu -248 63 2 743 256 89 4 chr17 6533931 6534201 -82970352 - L2 LINE L2 -769 2545 2253 2297 95 0 13 chr17 6535674 6535979 -82968574 - AluY SINE Alu -10 301 1 267 319 25 8 chr17 6536156 6536275 -82968278 - MIR SINE MIR -29 233 113 378 303 36 18 chr17 6538150 6538315 -82966238 - L3 LINE CR1 -37 1540 1373 1686 263 70 92 chr17 6538585 6540061 -82964492 + L1MEc LINE L1 837 2237 -3978 983 234 128 35 chr17 6540061 6540104 -82964449 + L1M4 LINE L1 4287 4325 -1821 2322 115 0 0 chr17 6540104 6540408 -82964145 + AluSg SINE Alu 1 304 -6 983 234 128 35 chr17 6540408 6540740 -82963813 + L1M4 LINE L1 4325 4697 -1449 5539 148 50 35 chr17 6540747 6541139 -82963414 - Tigger3b DNA MER2_type -1797 1231 846 2276 117 0 0 chr17 6541139 6541448 -82963105 - AluSc SINE Alu 0 309 1 5539 148 50 35 chr17 6541448 6541691 -82962862 - Tigger3b DNA MER2_type -2182 846 608 189 0 0 0 chr17 6541691 6541712 -82962841 + (TATG)n Simple_repeat Simple_repeat 4 24 0 5539 148 50 35 chr17 6541712 6542002 -82962551 - Tigger3b DNA MER2_type -2420 608 286 2051 124 0 54 chr17 6542002 6542317 -82962236 + AluSq SINE Alu 1 298 -15 5539 148 50 35 chr17 6542317 6542431 -82962122 - Tigger3b DNA MER2_type -2742 286 175 1565 211 54 30 chr17 6542519 6543053 -82961500 + L1M4 LINE L1 4749 5343 -803 2574 68 0 3 chr17 6543078 6543385 -82961168 - AluY SINE Alu -5 306 1 1241 114 51 0 chr17 6543385 6543561 -82960992 - AluSg/x SINE Alu -3 309 125 378 291 7 11 chr17 6543610 6543760 -82960793 + MIR SINE MIR 21 168 -60 2745 42 0 0 chr17 6545067 6545377 -82959176 + AluY SINE Alu 1 310 -1 286 270 0 14 chr17 6545660 6545734 -82958819 - MIR SINE MIR -143 119 47 263 221 70 35 chr17 6546164 6546250 -82958303 - MIR SINE MIR -81 181 93 284 287 31 23 chr17 6546509 6546638 -82957915 + MIR3 SINE MIR 41 170 -38 1092 124 18 0 chr17 6546655 6546943 -82957610 + (TCCA)n Simple_repeat Simple_repeat 1 293 0 1029 227 10 0 chr17 6546994 6547192 -82957361 - MER58A DNA MER1_type -24 200 1 256 269 74 9 chr17 6547397 6547505 -82957048 - L2 LINE L2 -327 2986 2872 601 185 29 0 chr17 6548336 6548509 -82956044 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 772 110 25 12 chr17 6548542 6548705 -82955848 + (TCCA)n Simple_repeat Simple_repeat 1 165 0 1285 110 0 0 chr17 6548732 6548905 -82955648 - AluSp SINE Alu -1 312 140 578 276 0 0 chr17 6549257 6549402 -82955151 + MIR SINE MIR 94 238 -24 202 320 96 32 chr17 6549990 6550209 -82954344 - L3 LINE CR1 -56 1521 1289 446 273 103 56 chr17 6550355 6550438 -82954115 + MLT1H LTR MaLR 25 103 -446 2255 85 0 10 chr17 6550438 6550731 -82953822 - AluSg SINE Alu -20 290 1 446 273 103 56 chr17 6550731 6551100 -82953453 + MLT1H LTR MaLR 103 543 -6 286 318 95 24 chr17 6551174 6551300 -82953253 + MIR3 SINE MIR 49 183 -25 2049 125 0 3 chr17 6551727 6552014 -82952539 - AluSx SINE Alu -26 286 1 231 308 53 24 chr17 6552339 6552508 -82952045 + L1MDa LINE L1 1534 1707 -4833 196 213 128 0 chr17 6552543 6552590 -82951963 - L2 LINE L2 0 3313 3261 282 114 10 44 chr17 6553462 6553514 -82951039 - MLT2C1 LTR ERVL 0 520 347 2450 150 61 74 chr17 6553589 6553698 -82950855 + LTR44 LTR ERV1 1 110 -409 2339 88 7 13 chr17 6553698 6554005 -82950548 - AluSx SINE Alu -7 305 1 2450 150 61 74 chr17 6554005 6554421 -82950132 + LTR44 LTR ERV1 110 519 0 2384 160 15 75 chr17 6555378 6555915 -82948638 + LTR57-int LTR ERVL 311 815 -4528 557 132 142 0 chr17 6555915 6556021 -82948532 + LTR49-int LTR ERV1 951 1071 -7049 * 785 235 53 30 chr17 6555981 6556245 -82948308 + LTR57-int LTR ERVL 1322 1591 -3752 * 1813 179 28 37 chr17 6556011 6556448 -82948105 + LTR49-int LTR ERV1 1317 1749 -6371 1316 171 100 150 chr17 6556460 6557282 -82947271 + LTR49-int LTR ERV1 2950 3730 -2868 2234 219 100 52 chr17 6557354 6557803 -82946750 + LTR49-int LTR ERV1 2477 2903 -3335 244 33 0 0 chr17 6557803 6557833 -82946720 + HSMAR1 DNA Mariner 1 30 -1257 2234 219 100 52 chr17 6557833 6558228 -82946325 + LTR49-int LTR ERV1 2903 3278 -2960 1868 141 0 14 chr17 6558228 6558518 -82946035 - AluSx SINE Alu -14 298 13 2234 219 100 52 chr17 6558518 6558914 -82945639 + LTR49-int LTR ERV1 3278 4964 -1274 2798 135 59 43 chr17 6559183 6559280 -82945273 + LTR44 LTR ERV1 1 95 -424 2554 54 0 0 chr17 6559280 6559576 -82944977 - AluY SINE Alu -15 296 1 2798 135 59 43 chr17 6559576 6559989 -82944564 + LTR44 LTR ERV1 95 519 0 1700 210 25 6 chr17 6559995 6560348 -82944205 - MLT2D LTR ERVL -54 360 1 2369 69 24 0 chr17 6560577 6560867 -82943686 + AluSc SINE Alu 1 297 -12 492 303 154 0 chr17 6560903 6561111 -82943442 - MIR SINE MIR -21 241 2 242 239 80 11 chr17 6561461 6561549 -82943004 - L2 LINE L2 -42 3230 3137 609 254 71 61 chr17 6561587 6561653 -82942900 - LTR16C LTR ERVL -28 463 399 2219 107 0 26 chr17 6561653 6561963 -82942590 + AluSx SINE Alu 1 302 -10 609 254 71 61 chr17 6561963 6562176 -82942377 - LTR16C LTR ERVL -92 399 181 2233 104 0 3 chr17 6562865 6563162 -82941391 - AluSq SINE Alu -4 309 14 362 299 21 36 chr17 6563258 6563452 -82941101 - L2 LINE L2 -2075 1239 1049 21 0 0 0 chr17 6563831 6563852 -82940701 + AT_rich Low_complexity Low_complexity 1 21 0 2578 62 0 0 chr17 6564363 6564672 -82939881 - AluY SINE Alu -2 309 1 575 171 117 0 chr17 6564744 6564855 -82939698 - MSTA LTR MaLR 0 428 305 3398 116 40 78 chr17 6564861 6565493 -82939060 - LTR1 LTR ERV1 0 785 178 29 47 0 0 chr17 6565523 6565566 -82938987 + AT_rich Low_complexity Low_complexity 1 43 0 330 86 32 75 chr17 6565583 6565769 -82938784 + (TATAA)n Simple_repeat Simple_repeat 2 179 0 * 348 111 64 23 chr17 6565728 6565899 -82938654 + (TA)n Simple_repeat Simple_repeat 1 178 0 210 235 12 25 chr17 6565900 6565981 -82938572 + (TTATA)n Simple_repeat Simple_repeat 5 84 0 211 74 56 68 chr17 6565994 6566156 -82938397 + (TATAA)n Simple_repeat Simple_repeat 5 164 0 2069 183 112 9 chr17 6566156 6567196 -82937357 - SATR1 Satellite Satellite -5 1147 1 1950 103 0 4 chr17 6567196 6567448 -82937105 - AluSq SINE Alu -62 251 1 1647 138 0 66 chr17 6567457 6567772 -82936781 - AluSg SINE Alu 0 310 20 935 128 78 11 chr17 6567780 6567960 -82936593 - LTR1 LTR ERV1 -593 192 1 1554 136 23 58 chr17 6567960 6568268 -82936285 - MSTA LTR MaLR -131 297 1 258 32 0 0 chr17 6568311 6568342 -82936211 + (TG)n Simple_repeat Simple_repeat 2 32 0 856 299 60 20 chr17 6568355 6569356 -82935197 - L1MC4a LINE L1 -529 5710 4957 1353 226 14 44 chr17 6569527 6569890 -82934663 - MLT1A1 LTR MaLR 0 365 14 1941 126 58 3 chr17 6570008 6570301 -82934252 - AluSx SINE Alu -3 309 1 664 97 0 124 chr17 6570402 6570547 -82934006 - AluY SINE Alu 0 311 185 1020 307 128 22 chr17 6570548 6571460 -82933093 - L1MC4a LINE L1 -4326 2070 1062 2180 128 3 0 chr17 6571483 6571781 -82932772 - AluY SINE Alu -12 299 1 29 0 0 0 chr17 6572222 6572251 -82932302 + AT_rich Low_complexity Low_complexity 1 29 0 1678 120 89 0 chr17 6572251 6572509 -82932044 - L1PB3 LINE L1 -7 6147 5867 581 325 81 42 chr17 6572674 6573770 -82930783 - L1M4 LINE L1 -1872 4274 3136 390 167 14 14 chr17 6574241 6574313 -82930240 - MER68 LTR ERV1 -227 335 264 2282 117 0 0 chr17 6574904 6575204 -82929349 - AluSx SINE Alu -12 300 1 2759 195 19 35 chr17 6575401 6575971 -82928582 - MER68 LTR ERV1 0 562 2 2560 68 0 0 chr17 6576384 6576694 -82927859 - AluY SINE Alu -1 310 1 443 339 50 21 chr17 6576718 6577001 -82927552 + L2 LINE L2 2200 2490 -824 403 207 112 17 chr17 6577017 6577133 -82927420 - MLT1H LTR MaLR -2 547 421 487 293 122 11 chr17 6577150 6577338 -82927215 - MLT1H LTR MaLR -328 221 13 313 367 103 33 chr17 6577379 6577909 -82926644 + L2 LINE L2 2549 3129 -143 637 181 0 0 chr17 6577978 6578083 -82926470 + MER58B DNA MER1_type 225 329 -12 1080 218 5 0 chr17 6578809 6579020 -82925533 + MER58A DNA MER1_type 1 212 -12 772 115 0 44 chr17 6580446 6580559 -82923994 - AluSg/x SINE Alu -27 285 178 300 292 0 34 chr17 6580564 6580653 -82923900 + MIR SINE MIR 106 191 -71 2300 107 0 7 chr17 6580750 6581049 -82923504 - AluSx SINE Alu -15 297 1 1758 148 0 21 chr17 6581925 6582209 -82922344 - AluSc SINE Alu -3 306 29 311 302 87 8 chr17 6583081 6583207 -82921346 + MIR3 SINE MIR 69 204 -4 1033 49 18 18 chr17 6583336 6583499 -82921054 + (TTTC)n Simple_repeat Simple_repeat 4 166 0 337 130 43 0 chr17 6583507 6583576 -82920977 + CT-rich Low_complexity Low_complexity 2 73 0 1937 173 3 25 chr17 6583576 6583894 -82920659 - AluJo SINE Alu -1 311 1 617 363 116 3 chr17 6584215 6584604 -82919949 - L3 LINE CR1 -1 1576 1144 366 289 134 34 chr17 6584869 6585018 -82919535 - MIR3 SINE MIR -11 197 34 420 327 61 6 chr17 6585676 6585841 -82918712 + MIR SINE MIR 33 206 -56 555 200 9 0 chr17 6586012 6586122 -82918431 - MIR SINE MIR 0 262 152 1148 178 22 18 chr17 6586123 6586348 -82918205 + MER46A DNA MER2_type 3 228 -8 288 290 120 0 chr17 6586354 6586454 -82918099 - MIR SINE MIR -108 154 43 339 311 114 0 chr17 6586502 6586598 -82917955 - HAL1 LINE L1 -1016 1491 1375 2401 103 3 0 chr17 6586598 6586910 -82917643 - AluSp SINE Alu 0 313 1 339 311 114 0 chr17 6586910 6586945 -82917608 - HAL1 LINE L1 -1132 1375 1345 300 339 52 22 chr17 6586947 6587310 -82917243 - L1MEd LINE L1 -4886 1233 860 2248 131 0 6 chr17 6587854 6588168 -82916385 - AluSx SINE Alu 0 312 1 32 43 0 0 chr17 6588269 6588315 -82916238 + AT_rich Low_complexity Low_complexity 1 46 0 2214 97 0 58 chr17 6588517 6588847 -82915706 - AluSx SINE Alu -1 311 1 188 67 33 0 chr17 6590271 6590301 -82914252 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 2318 79 10 0 chr17 6590303 6590593 -82913960 - AluSp SINE Alu -20 293 1 189 0 0 0 chr17 6591034 6591055 -82913498 + (T)n Simple_repeat Simple_repeat 1 21 0 864 198 45 124 chr17 6591577 6591750 -82912803 + MLT1B LTR MaLR 2 187 -203 2256 84 16 26 chr17 6591750 6592059 -82912494 + AluY SINE Alu 1 306 -5 864 198 45 124 chr17 6592059 6592179 -82912374 + MLT1B LTR MaLR 187 265 -125 2051 127 21 3 chr17 6592179 6592470 -82912083 + AluSx SINE Alu 1 296 -16 864 198 45 124 chr17 6592470 6592529 -82912024 + MLT1B LTR MaLR 265 327 -63 330 306 61 16 chr17 6592721 6592869 -82911684 - MIR SINE MIR -61 147 33 304 152 0 0 chr17 6595865 6595911 -82908642 + MER46A DNA MER2_type 1 46 -190 576 244 99 112 chr17 6596547 6597011 -82907542 + LTR33A LTR ERVL 66 523 0 433 308 103 52 chr17 6597077 6597521 -82907032 + L2 LINE L2 2460 2955 -317 2293 110 3 0 chr17 6597521 6597821 -82906732 - AluSx SINE Alu -11 301 1 433 308 103 52 chr17 6597821 6598130 -82906423 + L2 LINE L2 2955 3247 -25 927 148 228 0 chr17 6598844 6599033 -82905520 + MER46A DNA MER2_type 1 232 -4 1172 245 52 16 chr17 6599103 6599449 -82905104 + L1MD2 LINE L1 5978 6339 -20 2261 104 3 0 chr17 6599449 6599738 -82904815 - AluSg SINE Alu -20 290 1 1172 245 52 16 chr17 6599738 6599759 -82904794 + L1MD2 LINE L1 6339 6358 -1 459 152 0 0 chr17 6600527 6600606 -82903947 + (TG)n Simple_repeat Simple_repeat 1 79 0 316 323 57 31 chr17 6600783 6600975 -82903578 + MIR3 SINE MIR 1 197 -11 720 294 97 32 chr17 6601190 6601499 -82903054 - L3 LINE CR1 -106 1471 1143 2602 77 3 0 chr17 6601506 6601816 -82902737 - AluSp SINE Alu -2 311 1 228 292 52 0 chr17 6602123 6602219 -82902334 - L1ME LINE L1 -331 5790 5690 358 258 116 32 chr17 6602486 6602641 -82901912 + MIR SINE MIR 1 168 -94 1543 223 108 7 chr17 6602671 6603116 -82901437 - MLT1D LTR MaLR 0 505 16 1389 247 105 70 chr17 6603147 6603747 -82900806 + L2 LINE L2 2110 2730 -584 294 118 0 0 chr17 6604492 6604543 -82900010 - L1MB2 LINE L1 -1 6170 6120 2138 124 7 13 chr17 6604543 6604842 -82899711 - AluSq SINE Alu -16 297 1 373 297 120 0 chr17 6605783 6605958 -82898595 + MIR SINE MIR 51 246 -16 5102 56 0 0 chr17 6606372 6606993 -82897560 - L1PA8 LINE L1 0 6172 5552 180 250 0 0 chr17 6607087 6607123 -82897430 - MIR SINE MIR -70 192 157 375 23 0 0 chr17 6607280 6607324 -82897229 + (CA)n Simple_repeat Simple_repeat 2 45 0 1627 195 74 39 chr17 6607629 6607897 -82896656 - MLT1D LTR MaLR -4 501 209 204 67 0 0 chr17 6607897 6607927 -82896626 + (CACAT)n Simple_repeat Simple_repeat 4 33 0 1627 195 74 39 chr17 6607927 6608120 -82896433 - MLT1D LTR MaLR -296 209 24 2332 207 30 18 chr17 6608608 6609110 -82895443 - LTR40a LTR ERVL -4 515 8 207 149 257 40 chr17 6609172 6609246 -82895307 - MIR SINE MIR -66 196 107 599 320 44 55 chr17 6609301 6609484 -82895069 + ERVL LTR ERVL 4302 4485 -1279 2142 109 35 0 chr17 6609484 6609769 -82894784 - AluSp SINE Alu -18 295 1 599 320 44 55 chr17 6609769 6610041 -82894512 + ERVL LTR ERVL 4485 4752 -1012 353 241 23 11 chr17 6610103 6610190 -82894363 + ERVL LTR ERVL 4894 4981 -783 2091 144 0 0 chr17 6610694 6611000 -82893553 - AluSx SINE Alu -6 306 1 2356 92 0 13 chr17 6611119 6611425 -82893128 - AluSq SINE Alu -11 302 1 3322 152 29 15 chr17 6612014 6612285 -82892268 + L1MB3 LINE L1 5562 5828 -355 2412 95 0 3 chr17 6612285 6612590 -82891963 + AluSq SINE Alu 1 304 -9 3322 152 29 15 chr17 6612590 6612931 -82891622 + L1MB3 LINE L1 5828 6183 0 2277 124 0 3 chr17 6612942 6613256 -82891297 + AluSq SINE Alu 1 313 0 212 353 35 0 chr17 6613836 6613921 -82890632 + MIR SINE MIR 62 149 -59 186 80 9 0 chr17 6614640 6614715 -82889838 + (A)n Simple_repeat Simple_repeat 1 30 0 274 200 67 40 chr17 6614965 6615040 -82889513 - MER5B DNA MER1_type -101 77 1 390 307 200 5 chr17 6616122 6616327 -82888226 + MIR SINE MIR 17 261 -1 777 301 39 52 chr17 6616441 6616879 -82887674 + MLT1K LTR MaLR 140 571 -17 2253 110 0 0 chr17 6617875 6618175 -82886378 + AluY SINE Alu 1 300 -11 2199 124 51 28 chr17 6618481 6618837 -82885716 + THE1B LTR MaLR 1 364 0 2176 115 3 7 chr17 6620363 6620658 -82883895 - AluSq SINE Alu -19 294 1 402 283 134 37 chr17 6620819 6620957 -82883596 - MIR SINE MIR -55 207 45 2532 193 107 4 chr17 6620957 6621374 -82883179 - MLT1F1 LTR MaLR 0 567 86 198 0 0 0 chr17 6621374 6621396 -82883157 + (TTCA)n Simple_repeat Simple_repeat 4 25 0 2532 193 107 4 chr17 6621396 6621492 -82883061 - MLT1F1 LTR MaLR -481 86 1 402 283 134 37 chr17 6621492 6621540 -82883013 - MIR SINE MIR -217 45 3 377 322 131 21 chr17 6621920 6622311 -82882242 + L2 LINE L2 2615 3043 -229 189 0 0 0 chr17 6623580 6623601 -82880952 + (T)n Simple_repeat Simple_repeat 1 21 0 539 262 87 0 chr17 6623849 6624021 -82880532 - LTR33A LTR ERVL -40 483 297 231 316 26 0 chr17 6624240 6624316 -82880237 - L2 LINE L2 -633 2681 2604 732 230 7 0 chr17 6624322 6624474 -82880079 - MLT1E LTR MaLR -8 585 433 422 191 101 0 chr17 6624531 6624620 -82879933 - MLT1E1 LTR MaLR -556 98 1 392 165 24 24 chr17 6624620 6624705 -82879848 - L2 LINE L2 -704 2610 2526 2261 113 0 3 chr17 6625331 6625624 -82878929 - AluSq SINE Alu -17 296 5 458 327 127 9 chr17 6625708 6625845 -82878708 - L2 LINE L2 -276 2996 2877 2050 127 0 17 chr17 6625845 6626145 -82878408 + AluSq SINE Alu 1 295 -18 458 327 127 9 chr17 6626145 6626271 -82878282 - L2 LINE L2 -395 2877 2705 2419 90 0 3 chr17 6627395 6627695 -82876858 - AluSx SINE Alu -13 299 1 426 222 32 56 chr17 6627751 6627774 -82876779 - MIR SINE MIR -131 131 109 2152 211 132 9 chr17 6627774 6628304 -82876249 + MLT1G1 LTR MaLR 1 595 0 426 222 32 56 chr17 6628304 6628406 -82876147 - MIR SINE MIR -153 109 9 201 231 58 0 chr17 6628407 6628459 -82876094 + MIR SINE MIR 194 248 -14 241 317 0 0 chr17 6629248 6629308 -82875245 + (TCTA)n Simple_repeat Simple_repeat 2 61 0 639 251 112 27 chr17 6629315 6629538 -82875015 + MIR SINE MIR 1 242 -20 2046 142 0 40 chr17 6629745 6630068 -82874485 - AluSx SINE Alu -2 310 1 191 233 194 0 chr17 6630135 6630238 -82874315 - MIR SINE MIR -69 193 71 2288 116 0 0 chr17 6630869 6631170 -82873383 - AluSx SINE Alu -11 301 1 2392 97 3 0 chr17 6631405 6631705 -82872848 - AluSp SINE Alu -12 301 1 1438 217 32 32 chr17 6631734 6632075 -82872478 - MER58B DNA MER1_type 0 341 1 1444 43 0 32 chr17 6632452 6632639 -82871914 - L1PA8 LINE L1 -400 5772 5592 2871 71 15 18 chr17 6632639 6633030 -82871523 + L1PA8 LINE L1 5779 6170 -2 24 32 0 0 chr17 6633824 6633855 -82870698 + AT_rich Low_complexity Low_complexity 1 31 0 649 305 102 24 chr17 6634094 6634514 -82870039 + MLT1K LTR MaLR 101 553 -35 207 0 0 0 chr17 6634975 6634998 -82869555 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 248 77 26 0 chr17 6635279 6635318 -82869235 + (TTCC)n Simple_repeat Simple_repeat 3 42 0 8224 194 33 26 chr17 6635328 6637560 -82866993 - L1MC1 LINE L1 -7 6326 4111 2424 61 3 14 chr17 6637560 6637857 -82866696 - AluY SINE Alu -17 294 1 8224 194 33 26 chr17 6637857 6638153 -82866400 - L1MC1 LINE L1 -2222 4111 3819 2488 62 7 7 chr17 6638153 6638460 -82866093 - AluY SINE Alu -4 307 1 8224 194 33 26 chr17 6638460 6639086 -82865467 - L1MC1 LINE L1 -2514 3819 3153 2398 212 11 6 chr17 6639354 6639902 -82864651 + L1 LINE L1 4242 4792 -1354 22 70 0 0 chr17 6639924 6639967 -82864586 + AT_rich Low_complexity Low_complexity 1 43 0 4801 79 5 2 chr17 6639967 6640603 -82863950 - L1PB1 LINE L1 0 6151 5514 394 223 90 42 chr17 6640605 6640771 -82863782 - MLT1D LTR MaLR -219 286 113 916 197 112 5 chr17 6640838 6641017 -82863536 + MSTA LTR MaLR 1 202 -226 1971 98 52 38 chr17 6641017 6641304 -82863249 + AluSx SINE Alu 1 291 -21 2445 102 0 0 chr17 6641314 6641656 -82862897 - L1P LINE L1 -3154 2992 2651 4416 33 0 0 chr17 6641656 6642167 -82862386 + L1PA7 LINE L1 5642 6154 0 1228 159 100 9 chr17 6642171 6642391 -82862162 + MSTA LTR MaLR 187 426 -2 936 203 95 0 chr17 6642411 6642652 -82861901 + L1MA4 LINE L1 6036 6299 -1 1869 137 48 0 chr17 6642684 6642976 -82861577 + AluSp SINE Alu 1 306 -7 2298 118 0 9 chr17 6643714 6644029 -82860524 + AluSx SINE Alu 1 312 0 1919 233 99 8 chr17 6645723 6646229 -82858324 - MLT1H1 LTR MaLR 0 555 4 307 293 47 0 chr17 6646356 6646462 -82858091 + MIR SINE MIR 118 228 -34 305 200 128 124 chr17 6646552 6646802 -82857751 - MER112 DNA MER1_type -9 251 1 257 185 46 169 chr17 6647567 6647762 -82856791 + MLT1K LTR MaLR 408 578 -10 505 239 104 54 chr17 6648778 6649000 -82855553 + MER112 DNA MER1_type 3 235 -25 320 325 62 44 chr17 6649058 6649475 -82855078 - L2 LINE L2 -218 3054 2623 231 280 40 103 chr17 6649526 6649701 -82854852 - MER91A DNA MER1_type -32 164 1 207 303 71 10 chr17 6651114 6651213 -82853340 - MIR SINE MIR -130 132 28 1705 193 58 28 chr17 6652311 6652552 -82852001 + MLT1C LTR MaLR 22 281 -186 1668 102 0 4 chr17 6652552 6652777 -82851776 + AluSq SINE Alu 86 309 -4 1705 193 58 28 chr17 6652777 6652928 -82851625 + MLT1C LTR MaLR 281 426 -41 2269 95 6 25 chr17 6653620 6653935 -82850618 - AluSx SINE Alu -1 311 3 1415 218 51 9 chr17 6654753 6655069 -82849484 + Charlie1a DNA MER1_type 14 342 -1113 2033 67 0 0 chr17 6655085 6655355 -82849198 + AluY SINE Alu 44 313 0 1481 213 45 3 chr17 6655355 6655669 -82848884 - Charlie1a DNA MER1_type -1115 340 14 4380 185 102 18 chr17 6656066 6657107 -82847446 + Charlie1a DNA MER1_type 327 1454 -1 2001 137 42 70 chr17 6657476 6657642 -82846911 + MLT1B LTR MaLR 1 170 -220 2561 65 0 3 chr17 6657642 6657949 -82846604 + AluY SINE Alu 1 306 -5 2001 137 42 70 chr17 6657949 6658183 -82846370 + MLT1B LTR MaLR 170 390 0 1242 200 19 0 chr17 6658517 6658777 -82845776 + MER33 DNA MER1_type 1 265 -59 5277 147 39 4 chr17 6658782 6659814 -82844739 + L1PA8 LINE L1 5111 6174 0 2237 124 8 39 chr17 6659814 6660068 -82844485 + L1PA16 LINE L1 5778 6017 -149 2099 170 75 12 chr17 6660068 6660467 -82844086 + MSTB LTR MaLR 3 426 0 2237 124 8 39 chr17 6660467 6660599 -82843954 + L1PA16 LINE L1 6017 6152 -14 2373 69 0 39 chr17 6661059 6661365 -82843188 - AluYa5 SINE Alu -16 295 2 892 247 11 0 chr17 6661493 6661679 -82842874 + MER5A DNA MER1_type 1 188 -1 884 45 18 0 chr17 6661992 6662104 -82842449 + L1PA5 LINE L1 6039 6152 -2 290 186 29 20 chr17 6662426 6662528 -82842025 + CT-rich Low_complexity Low_complexity 2 104 0 329 250 12 12 chr17 6662579 6662663 -82841890 - MIR SINE MIR -21 241 158 546 206 66 0 chr17 6662767 6662900 -82841653 - MIR SINE MIR -52 156 17 1534 197 14 17 chr17 6663300 6663661 -82840892 + L1P LINE L1 4984 5343 -803 3231 233 36 17 chr17 6664169 6665075 -82839478 - L1ME1 LINE L1 -61 6900 5986 915 138 22 2 chr17 6665075 6665235 -82839318 + L1PB1 LINE L1 5989 6154 0 2451 253 95 29 chr17 6665249 6666685 -82837868 - L1ME1 LINE L1 -954 5987 4387 1312 233 75 30 chr17 6666710 6667233 -82837320 - L1ME1 LINE L1 -3526 3415 2897 7127 248 34 34 chr17 6667680 6668064 -82836489 - L1ME1 LINE L1 -4176 2946 2563 2001 98 4 4 chr17 6668064 6668330 -82836223 - AluSc SINE Alu -13 296 31 7127 248 34 34 chr17 6668330 6670683 -82833870 - L1ME1 LINE L1 -4559 2563 1 1453 208 123 117 chr17 6670781 6671300 -82833253 - MLT1G1 LTR MaLR 0 595 81 1530 172 0 48 chr17 6671300 6671403 -82833150 + AluJb SINE Alu 37 143 -169 2114 114 31 0 chr17 6671403 6671693 -82832860 + AluSq SINE Alu 1 299 -14 596 38 13 0 chr17 6671693 6671772 -82832781 + (TCTA)n Simple_repeat Simple_repeat 4 83 0 1530 172 0 48 chr17 6671772 6671957 -82832596 + AluJb SINE Alu 141 312 0 1453 208 123 117 chr17 6671957 6672028 -82832525 - MLT1G1 LTR MaLR -514 81 1 588 296 22 30 chr17 6672327 6672557 -82831996 + MIR SINE MIR 28 255 -7 2230 101 0 3 chr17 6672558 6672846 -82831707 - AluSx SINE Alu -12 300 14 22 35 0 0 chr17 6673086 6673115 -82831438 + AT_rich Low_complexity Low_complexity 1 29 0 1210 124 0 17 chr17 6673555 6673733 -82830820 - AluSg/x SINE Alu -1 311 137 2464 60 0 3 chr17 6674167 6674478 -82830075 + AluSp SINE Alu 1 310 0 228 326 45 0 chr17 6674872 6674961 -82829592 + MIR SINE MIR 47 139 -69 2869 141 22 13 chr17 6675681 6675786 -82828767 + LTR24 LTR ERV1 10 113 -354 2284 95 24 0 chr17 6675786 6676081 -82828472 - AluSp SINE Alu -11 302 1 2869 141 22 13 chr17 6676081 6676429 -82828124 + LTR24 LTR ERV1 113 467 0 389 276 55 31 chr17 6676449 6676612 -82827941 - L1ME3 LINE L1 -1 6161 5995 321 130 0 0 chr17 6676613 6676659 -82827894 - L1PA5 LINE L1 -202 5952 5907 * 1747 76 25 4 chr17 6676632 6676869 -82827684 + L1PA4 LINE L1 5914 6155 0 247 215 43 21 chr17 6677389 6677482 -82827071 - L1ME3 LINE L1 -69 6093 5999 2217 84 19 0 chr17 6677719 6678109 -82826444 - L1M3 LINE L1 -581 5602 5201 1505 71 0 15 chr17 6678109 6678305 -82826248 + L1PA8 LINE L1 5973 6166 -6 475 61 0 0 chr17 6678245 6678311 -82826242 + L1PA8 LINE L1 6107 6172 0 * 799 188 17 33 chr17 6678308 6678489 -82826064 - L1MC3 LINE L1 -6 7779 7602 * 3995 189 38 6 chr17 6678488 6678934 -82825619 - L1MC3 LINE L1 -457 7328 6845 252 0 0 0 chr17 6678934 6678962 -82825591 + (TG)n Simple_repeat Simple_repeat 2 29 0 3995 189 38 6 chr17 6678962 6679296 -82825257 - L1MC3 LINE L1 -940 6845 6523 588 136 48 0 chr17 6679321 6679424 -82825129 + FRAM SINE Alu 69 176 0 319 148 0 0 chr17 6679428 6679482 -82825071 - L1MC3 LINE L1 -1635 6150 6097 2615 193 105 15 chr17 6679486 6679843 -82824710 - L1MC3 LINE L1 -1265 6520 6197 2084 106 3 3 chr17 6679843 6680135 -82824418 - AluSx SINE Alu -20 292 1 2615 193 105 15 chr17 6680135 6680166 -82824387 - L1MC3 LINE L1 -1588 6197 6170 1458 186 29 11 chr17 6680166 6680440 -82824113 + AluJo SINE Alu 1 279 -33 2615 193 105 15 chr17 6680440 6680728 -82823825 - L1MC3 LINE L1 -1615 6170 5782 2470 173 22 88 chr17 6680737 6680959 -82823594 - MER44D DNA MER2_type -1890 597 362 2051 93 3 45 chr17 6680959 6681270 -82823283 - AluY SINE Alu -13 298 1 2470 173 22 88 chr17 6681270 6681625 -82822928 - MER44D DNA MER2_type -2125 362 3 849 141 4 40 chr17 6681626 6681808 -82822745 - L1MC3 LINE L1 -560 5784 5606 2193 100 0 6 chr17 6681816 6682127 -82822426 + AluSq SINE Alu 5 313 0 5610 243 31 47 chr17 6682135 6682712 -82821841 - L1MC3 LINE L1 -8 7777 7193 2099 124 0 0 chr17 6682712 6683019 -82821534 - AluSx SINE Alu -5 307 1 5610 243 31 47 chr17 6683019 6684193 -82820360 - L1MC3 LINE L1 -592 7193 6053 771 250 72 19 chr17 6684210 6684474 -82820079 - L1ME3A LINE L1 -229 5941 5664 315 283 142 25 chr17 6684513 6684633 -82819920 - L1MEd LINE L1 -5967 152 19 188 353 25 49 chr17 6684706 6684828 -82819725 - MIR3 SINE MIR -75 133 15 224 303 0 15 chr17 6685053 6685119 -82819434 + GA-rich Low_complexity Low_complexity 1 65 0 664 311 78 91 chr17 6687074 6687181 -82817372 + L1M4 LINE L1 2142 2249 -3897 2126 103 7 3 chr17 6687181 6687483 -82817070 + AluSx SINE Alu 1 303 -9 664 311 78 91 chr17 6687483 6688179 -82816374 + L1M4 LINE L1 2249 2935 -3211 2029 71 0 15 chr17 6688192 6688459 -82816094 + AluY SINE Alu 1 263 -48 186 43 0 0 chr17 6688468 6688491 -82816062 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 2072 129 0 0 chr17 6688515 6688809 -82815744 + AluSx SINE Alu 1 294 -18 711 325 57 61 chr17 6688813 6689238 -82815315 + L1M4 LINE L1 2956 3378 -2768 280 309 135 39 chr17 6689350 6689415 -82815138 + L2 LINE L2 922 979 -2335 2231 77 3 3 chr17 6689415 6689713 -82814840 - AluY SINE Alu -13 298 1 280 309 135 39 chr17 6689713 6689906 -82814647 + L2 LINE L2 979 1205 -2109 1572 224 132 50 chr17 6690073 6690574 -82813979 + MLT1F LTR MaLR 1 542 0 225 0 0 0 chr17 6690844 6690869 -82813684 + (TG)n Simple_repeat Simple_repeat 2 26 0 452 314 32 11 chr17 6690880 6691068 -82813485 - L1MC4 LINE L1 -130 7912 7721 714 179 0 0 chr17 6691504 6691621 -82812932 - AluJb SINE Alu -194 118 2 1107 228 104 31 chr17 6691760 6692146 -82812407 - L1MC4 LINE L1 -466 7576 7163 22 0 0 0 chr17 6692770 6692792 -82811761 + AT_rich Low_complexity Low_complexity 1 22 0 531 239 18 0 chr17 6693302 6693411 -82811142 - MER81 DNA DNA -3 111 1 201 74 0 0 chr17 6693685 6693712 -82810841 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 188 299 69 11 chr17 6693714 6693801 -82810752 + L2 LINE L2 1874 1965 -1349 383 259 36 67 chr17 6693803 6694027 -82810526 + L1M4 LINE L1 4229 4445 -1701 856 217 28 0 chr17 6694047 6694227 -82810326 - MER5A DNA MER1_type -4 185 1 461 309 130 30 chr17 6694274 6694743 -82809810 + L2 LINE L2 1982 2497 -817 422 304 8 16 chr17 6695318 6695443 -82809110 + MIR3 SINE MIR 82 205 -3 207 0 0 0 chr17 6695819 6695842 -82808711 + (CA)n Simple_repeat Simple_repeat 2 24 0 1929 212 28 42 chr17 6696129 6696323 -82808230 - L1ME2 LINE L1 -108 6056 5861 1924 131 3 13 chr17 6696323 6696629 -82807924 + AluSq SINE Alu 3 305 -8 1929 212 28 42 chr17 6696629 6696935 -82807618 - L1ME2 LINE L1 -303 5861 5563 199 279 295 23 chr17 6697472 6697601 -82806952 - MIR3 SINE MIR -29 179 16 3558 128 60 15 chr17 6697732 6698316 -82806237 - LTR31 LTR ERV1 -9 610 1 844 171 0 0 chr17 6699448 6699588 -82804965 - LTR31 LTR ERV1 -111 508 369 196 318 30 0 chr17 6700692 6700758 -82803795 - MIR3 SINE MIR -24 184 117 547 209 62 16 chr17 6701359 6701488 -82803065 - Tigger1 DNA MER2_type 0 2418 2284 2648 244 105 45 chr17 6701488 6702576 -82801977 - L1ME3 LINE L1 -275 5887 4866 180 0 0 0 chr17 6702576 6702596 -82801957 + (TTAA)n Simple_repeat Simple_repeat 3 22 0 2648 244 105 45 chr17 6702596 6702635 -82801918 - L1ME3 LINE L1 -1296 4866 4831 2770 10 0 0 chr17 6702635 6702946 -82801607 - AluYa5 SINE Alu 0 311 1 2648 244 105 45 chr17 6702946 6703652 -82800901 - L1ME3 LINE L1 -1331 4831 3923 1931 125 11 0 chr17 6703652 6703973 -82800580 + AluSx SINE Alu 1 324 0 2648 244 105 45 chr17 6703973 6704040 -82800513 - L1ME3 LINE L1 -2239 3923 3861 2115 109 3 13 chr17 6704972 6705259 -82799294 + AluSg SINE Alu 1 286 -24 207 0 0 0 chr17 6705259 6705282 -82799271 + (TTAA)n Simple_repeat Simple_repeat 1 23 0 2115 109 3 13 chr17 6705282 6705307 -82799246 + AluSg SINE Alu 286 310 0 420 20 0 0 chr17 6706233 6706282 -82798271 + (TG)n Simple_repeat Simple_repeat 1 49 0 243 61 0 0 chr17 6706282 6706315 -82798238 + (TGG)n Simple_repeat Simple_repeat 3 35 0 289 309 90 51 chr17 6706315 6706626 -82797927 - L2 LINE L2 -337 2977 2655 275 275 297 0 chr17 6706602 6706666 -82797887 + MER5A DNA MER1_type 11 55 -134 * 2614 81 23 3 chr17 6706666 6707014 -82797539 - THE1A LTR MaLR 0 355 1 275 275 297 0 chr17 6707014 6707087 -82797466 + MER5A DNA MER1_type 55 189 0 213 362 26 9 chr17 6707116 6707232 -82797321 - L2 LINE L2 -639 2675 2558 276 233 93 35 chr17 6708353 6708439 -82796114 - L2 LINE L2 -40 3232 3142 225 298 54 127 chr17 6708798 6709184 -82795369 - L2 LINE L2 -94 3178 2821 193 332 142 40 chr17 6709717 6709970 -82794583 - L2 LINE L2 -99 3173 2895 644 204 0 0 chr17 6709999 6710112 -82794441 + Charlie3 DNA MER1_type 1 113 -2597 1962 126 0 16 chr17 6710112 6710429 -82794124 - AluSx SINE Alu 0 312 1 1651 274 88 32 chr17 6710440 6710791 -82793762 - L2 LINE L2 -243 3070 2740 2092 107 24 0 chr17 6710791 6711081 -82793472 + AluSx SINE Alu 1 297 -15 1651 274 88 32 chr17 6711081 6711438 -82793115 - L2 LINE L2 -573 2740 2316 643 290 71 25 chr17 6711773 6711914 -82792639 + MIR SINE MIR 4 162 -100 1317 145 114 77 chr17 6711914 6712266 -82792287 - MLT1A1 LTR MaLR 0 365 1 643 290 71 25 chr17 6712266 6712362 -82792191 + MIR SINE MIR 162 252 -10 2058 121 3 0 chr17 6712393 6712690 -82791863 - AluSq SINE Alu -15 298 1 376 236 13 66 chr17 6713429 6713586 -82790967 + MIR SINE MIR 2 147 -65 1786 170 61 86 chr17 6714081 6714331 -82790222 - MSTB LTR MaLR -7 419 183 2196 101 0 3 chr17 6714331 6714628 -82789925 - AluSx SINE Alu -16 296 1 1786 170 61 86 chr17 6714628 6714806 -82789747 - MSTB LTR MaLR -243 183 2 213 220 51 17 chr17 6715291 6715350 -82789203 - MIR SINE MIR -109 153 93 584 317 58 24 chr17 6716126 6716331 -82788222 - MIR SINE MIR -23 239 28 1894 112 0 0 chr17 6716363 6716631 -82787922 - AluSc SINE Alu 0 309 42 209 238 16 48 chr17 6716974 6717037 -82787516 - L2 LINE L2 -80 3192 3132 1579 225 71 88 chr17 6717179 6717744 -82786809 + MER68 LTR ERV1 2 556 -6 235 316 125 45 chr17 6717753 6718135 -82786418 - L2 LINE L2 -264 3008 2597 1254 151 18 18 chr17 6718370 6718588 -82785965 + MER20 DNA MER1_type 1 218 -1 850 194 15 63 chr17 6718598 6718804 -82785749 + MER3 DNA MER1_type 2 197 -12 534 299 0 7 chr17 6719520 6719667 -82784886 - MIR SINE MIR -95 167 22 2135 117 0 0 chr17 6719668 6719966 -82784587 - AluSx SINE Alu -14 298 1 790 226 26 15 chr17 6720594 6720789 -82783764 - MER117 DNA MER1_type 0 197 1 386 217 11 22 chr17 6720981 6721073 -82783480 - L3 LINE CR1 -97 1480 1390 2296 88 0 0 chr17 6721239 6721545 -82783008 + AluY SINE Alu 1 306 -5 338 250 105 24 chr17 6721586 6721710 -82782843 - L3 LINE CR1 -197 1380 1247 352 275 0 55 chr17 6721916 6722025 -82782528 - L2 LINE L2 -1 3271 3169 303 253 0 58 chr17 6722305 6722343 -82782210 - L1MC4 LINE L1 -1349 6693 6654 1782 114 3 50 chr17 6722343 6722670 -82781883 - AluSx SINE Alu 0 313 1 303 253 0 58 chr17 6722670 6722717 -82781836 - L1MC4 LINE L1 -1388 6654 6612 235 101 13 51 chr17 6722769 6722848 -82781705 + (TA)n Simple_repeat Simple_repeat 2 77 0 2351 167 38 38 chr17 6722850 6723353 -82781200 - L1MB4 LINE L1 -33 6147 5645 1844 173 39 33 chr17 6723417 6723801 -82780752 + MLT1B LTR MaLR 1 418 -8 21 0 0 0 chr17 6723863 6723884 -82780669 + AT_rich Low_complexity Low_complexity 1 21 0 828 173 0 0 chr17 6723933 6724066 -82780487 - FLAM_C SINE Alu 0 133 1 536 283 110 25 chr17 6724296 6724614 -82779939 - L1M4 LINE L1 -1295 4851 4507 22 0 0 0 chr17 6724630 6724652 -82779901 + AT_rich Low_complexity Low_complexity 1 22 0 669 311 161 40 chr17 6724690 6725055 -82779498 - L2 LINE L2 -359 2955 2513 2062 78 35 3 chr17 6725055 6725338 -82779215 + AluSg1 SINE Alu 1 292 -17 669 311 161 40 chr17 6725338 6725470 -82779083 - L2 LINE L2 -801 2513 2398 761 126 0 0 chr17 6726472 6726591 -82777962 + AluSg/x SINE Alu 193 311 -1 2069 116 7 3 chr17 6727790 6728092 -82776461 - AluSg SINE Alu -7 303 1 401 66 16 0 chr17 6728143 6728204 -82776349 + (GA)n Simple_repeat Simple_repeat 2 63 0 637 281 38 19 chr17 6728527 6728737 -82775816 - MIR SINE MIR -3 259 46 483 243 215 0 chr17 6728916 6729060 -82775493 - MER45A DNA AcHobo 0 178 4 217 0 0 0 chr17 6729407 6729431 -82775122 + (TTTTC)n Simple_repeat Simple_repeat 2 55 0 946 140 21 0 chr17 6729431 6729574 -82774979 - AluSg/x SINE Alu -1 305 137 271 376 0 32 chr17 6730444 6730630 -82773923 + (TG)n Simple_repeat Simple_repeat 1 180 0 * 282 294 39 0 chr17 6730543 6730645 -82773908 + (TATATG)n Simple_repeat Simple_repeat 2 107 0 2029 123 34 3 chr17 6730724 6731016 -82773537 + AluSx SINE Alu 1 301 -11 303 242 78 47 chr17 6732726 6732854 -82771699 - L2 LINE L2 -7 3265 3134 246 183 0 0 chr17 6732990 6733047 -82771506 - MIR SINE MIR -65 143 96 393 22 0 0 chr17 6733124 6733170 -82771383 + (TG)n Simple_repeat Simple_repeat 2 47 0 2146 90 0 4 chr17 6733170 6733437 -82771116 - AluSq SINE Alu -26 287 22 527 261 55 12 chr17 6734036 6734201 -82770352 + MIR SINE MIR 47 218 -44 2459 56 0 0 chr17 6734513 6734885 -82769668 + AluY SINE Alu 1 372 0 1428 229 8 43 chr17 6735760 6736008 -82768545 + L1MD3 LINE L1 7634 7866 -129 2064 149 0 0 chr17 6736008 6736297 -82768256 + AluSx SINE Alu 1 289 -23 1428 229 8 43 chr17 6736297 6736420 -82768133 + L1MD3 LINE L1 7866 7992 -3 347 329 87 0 chr17 6737089 6737238 -82767315 - MIR3 SINE MIR -30 178 17 288 266 133 90 chr17 6738080 6738358 -82766195 - L2 LINE L2 -2 3311 3022 182 372 0 39 chr17 6738383 6738461 -82766092 + L3 LINE CR1 398 472 -1105 * 332 341 66 24 chr17 6738456 6738623 -82765930 - MIR SINE MIR 0 262 89 302 302 145 17 chr17 6738703 6738875 -82765678 + L3 LINE CR1 473 666 -911 356 318 55 28 chr17 6738920 6739137 -82765416 + L2 LINE L2 2836 3058 -214 384 40 0 0 chr17 6739178 6739228 -82765325 + (TCTA)n Simple_repeat Simple_repeat 3 52 0 539 267 136 30 chr17 6739230 6739742 -82764811 + MLT1L LTR MaLR 10 615 0 180 354 154 15 chr17 6739777 6739907 -82764646 + L2 LINE L2 3124 3271 -1 603 244 60 0 chr17 6740825 6740993 -82763560 + MER45A DNA AcHobo 1 178 0 366 23 0 0 chr17 6741728 6741771 -82762782 + (TG)n Simple_repeat Simple_repeat 1 43 0 207 0 0 0 chr17 6741770 6741793 -82762760 + (GA)n Simple_repeat Simple_repeat 1 23 0 * 377 39 20 0 chr17 6742116 6742167 -82762386 + (TG)n Simple_repeat Simple_repeat 2 53 0 216 0 0 0 chr17 6742495 6742519 -82762034 + (TG)n Simple_repeat Simple_repeat 2 25 0 22 94 0 0 chr17 6742585 6742649 -82761904 + GC_rich Low_complexity Low_complexity 1 64 0 22 56 0 0 chr17 6742673 6742709 -82761844 + GC_rich Low_complexity Low_complexity 1 36 0 228 75 38 38 chr17 6742731 6742784 -82761769 + (CCCG)n Simple_repeat Simple_repeat 2 54 0 231 245 9 38 chr17 6743155 6743261 -82761292 + G-rich Low_complexity Low_complexity 2 104 0 2087 151 3 6 chr17 6745694 6746006 -82758547 + AluSx SINE Alu 1 311 -1 318 299 19 0 chr17 6746242 6746349 -82758204 + MIR SINE MIR 78 186 -76 310 340 70 19 chr17 6748480 6748695 -82755858 + MIR SINE MIR 29 254 -8 241 286 103 40 chr17 6749243 6749369 -82755184 - L2 LINE L2 -1 3271 3138 2378 98 3 0 chr17 6749443 6749740 -82754813 - AluSc SINE Alu -11 298 1 422 370 65 27 chr17 6750533 6750871 -82753682 - L2 LINE L2 0 3272 2922 288 170 0 0 chr17 6750917 6750970 -82753583 + (TG)n Simple_repeat Simple_repeat 1 53 0 551 291 56 39 chr17 6750982 6751216 -82753337 - L2 LINE L2 -451 2863 2626 604 290 50 23 chr17 6752186 6752407 -82752146 + MIR SINE MIR 13 239 -23 567 264 63 6 chr17 6752466 6752625 -82751928 - MIR SINE MIR -71 191 24 22 42 0 0 chr17 6753310 6753334 -82751219 + GC_rich Low_complexity Low_complexity 1 24 0 2208 107 20 3 chr17 6753804 6754102 -82750451 + AluSx SINE Alu 1 303 -9 692 221 28 17 chr17 6754198 6754379 -82750174 + MER5A DNA MER1_type 2 184 -5 321 197 13 26 chr17 6754495 6754571 -82749982 - MIR SINE MIR -102 160 86 974 208 36 5 chr17 6754574 6754795 -82749758 - LTR16C LTR ERVL -2 489 262 210 353 69 28 chr17 6755097 6755315 -82749238 - L2 LINE L2 -429 2885 2659 281 167 45 30 chr17 6755860 6755926 -82748627 - AluS SINE Alu -237 71 5 897 73 0 9 chr17 6755927 6756036 -82748517 + AluSx SINE Alu 46 153 -159 2277 109 3 0 chr17 6756161 6756465 -82748088 - AluSq SINE Alu -5 308 4 1493 109 37 251 chr17 6756470 6756857 -82747696 + Tigger3(Golem) DNA MER2_type 2497 2679 -350 2376 70 0 10 chr17 6756857 6757157 -82747396 - AluY SINE Alu -14 297 1 1493 109 37 251 chr17 6757157 6757446 -82747107 + Tigger3(Golem) DNA MER2_type 2679 3028 -1 435 309 94 43 chr17 6757508 6757829 -82746724 - L1MDa LINE L1 -3936 2604 2355 1092 215 0 0 chr17 6758087 6758282 -82746271 - MLT1A1 LTR MaLR -2 363 169 333 250 0 0 chr17 6758272 6758340 -82746213 - MLT1A1 LTR MaLR -129 236 169 * 333 250 0 0 chr17 6758330 6758398 -82746155 - MLT1A1 LTR MaLR -129 236 169 * 1314 153 49 5 chr17 6758388 6758611 -82745942 - MLT1A1 LTR MaLR -129 236 4 206 290 138 21 chr17 6758805 6758950 -82745603 - L3 LINE CR1 -108 1469 1308 387 295 12 66 chr17 6759771 6759937 -82744616 + MIR3 SINE MIR 33 189 -19 2634 65 0 0 chr17 6760164 6760471 -82744082 - AluY SINE Alu -4 307 1 237 109 0 43 chr17 6760512 6760558 -82743995 - MIR SINE MIR -102 160 117 315 322 48 7 chr17 6760625 6760771 -82743782 - MIR SINE MIR -99 163 12 435 197 0 0 chr17 6761033 6761109 -82743444 - MER63 DNA MER1_type -84 752 677 593 273 163 22 chr17 6761621 6761984 -82742569 + L2 LINE L2 2899 3312 -1 301 310 56 56 chr17 6762080 6762293 -82742260 + MIR SINE MIR 27 239 -23 683 205 0 18 chr17 6762609 6762775 -82741778 - L1MB5 LINE L1 0 6174 6012 984 181 78 21 chr17 6762790 6763033 -82741520 - L1MD3 LINE L1 -9 7986 7730 499 328 104 27 chr17 6763342 6763717 -82740836 - MLT1I LTR MaLR -1 408 5 2202 107 7 3 chr17 6764089 6764388 -82740165 - AluSc SINE Alu -9 300 1 789 263 109 63 chr17 6764437 6764851 -82739702 + MLT1D LTR MaLR 1 433 -72 254 301 21 11 chr17 6765313 6765406 -82739147 + MIR SINE MIR 30 123 -85 21 0 0 0 chr17 6765643 6765664 -82738889 + AT_rich Low_complexity Low_complexity 1 21 0 2206 119 0 0 chr17 6765747 6766040 -82738513 - AluSx SINE Alu -19 293 1 254 301 42 42 chr17 6766049 6766192 -82738361 + L2 LINE L2 3169 3311 -2 1641 260 47 57 chr17 6766912 6767511 -82737042 - MLT1E LTR MaLR 0 593 1 198 71 0 0 chr17 6768432 6768460 -82736093 + (TC)n Simple_repeat Simple_repeat 1 28 0 1177 130 5 31 chr17 6769581 6769755 -82734798 - AluJb SINE Alu -4 308 138 2140 133 0 3 chr17 6769755 6770049 -82734504 - AluSx SINE Alu -19 293 1 1177 130 5 31 chr17 6770049 6770066 -82734487 - AluJb SINE Alu -174 138 122 320 232 12 49 chr17 6770171 6770253 -82734300 - L1MC4 LINE L1 -1355 6687 6609 484 294 33 80 chr17 6770612 6770735 -82733818 - L1MC4 LINE L1 -2031 5777 5650 2311 97 13 7 chr17 6770735 6771043 -82733510 - AluSg SINE Alu 0 310 1 484 294 33 80 chr17 6771043 6771280 -82733273 - L1MC4 LINE L1 -2158 5650 5434 505 302 34 44 chr17 6772037 6772136 -82732417 - MIR SINE MIR -3 259 160 2194 113 0 13 chr17 6772136 6772437 -82732116 - AluSq SINE Alu -16 297 1 505 302 34 44 chr17 6772437 6772595 -82731958 - MIR SINE MIR -102 160 5 484 319 28 66 chr17 6773092 6773412 -82731141 + L2 LINE L2 2932 3239 -33 1245 109 0 40 chr17 6773421 6773596 -82730957 + AluSx SINE Alu 1 168 -144 446 298 4 8 chr17 6773696 6773931 -82730622 - AluSq SINE Alu -77 236 3 1782 142 0 77 chr17 6774001 6774324 -82730229 - AluSx SINE Alu -12 300 3 340 380 62 6 chr17 6774616 6774795 -82729758 - HAL1 LINE L1 -710 1797 1609 1936 142 48 0 chr17 6775270 6775565 -82728988 + AluSc SINE Alu 1 309 0 194 289 96 0 chr17 6775938 6776021 -82728532 - L2 LINE L2 0 3272 3182 372 266 49 21 chr17 6776031 6776174 -82728379 + MIR3 SINE MIR 4 150 -58 362 237 105 48 chr17 6776226 6776452 -82728101 - MIR SINE MIR -2 260 19 2192 136 0 0 chr17 6776479 6776788 -82727765 - AluSx SINE Alu 0 312 4 300 349 71 0 chr17 6777190 6777316 -82727237 - MIR3 SINE MIR -25 183 49 868 217 4 71 chr17 6777429 6777669 -82726884 - MER58A DNA MER1_type 0 224 1 340 346 82 22 chr17 6777723 6777905 -82726648 + L2 LINE L2 3079 3271 -1 513 182 0 0 chr17 6778252 6778351 -82726202 + (TG)n Simple_repeat Simple_repeat 2 100 0 805 166 0 45 chr17 6778363 6778520 -82726033 + MLT1B LTR MaLR 34 183 -207 767 176 36 24 chr17 6778501 6778666 -82725887 + MLT1B LTR MaLR 298 464 -3 * 2275 88 7 7 chr17 6779468 6779763 -82724790 + AluSg SINE Alu 5 299 -11 733 252 18 91 chr17 6780021 6780295 -82724258 + MIR SINE MIR 9 262 0 303 258 0 0 chr17 6780765 6780831 -82723722 - MIR SINE MIR -65 143 78 364 324 27 60 chr17 6781416 6781601 -82722952 + MIR3 SINE MIR 3 181 -27 268 356 11 0 chr17 6781952 6782039 -82722514 - L2 LINE L2 -64 3208 3121 312 294 117 22 chr17 6782879 6783059 -82721494 - LTR16A1 LTR ERVL -93 364 168 366 80 0 0 chr17 6784159 6784209 -82720344 + (TTCA)n Simple_repeat Simple_repeat 3 52 0 351 271 202 26 chr17 6784240 6784763 -82719790 - L2 LINE L2 -95 3218 2602 387 325 0 4 chr17 6785443 6785679 -82718874 + (CA)n Simple_repeat Simple_repeat 1 234 0 195 42 0 0 chr17 6786232 6786256 -82718297 + (TCCA)n Simple_repeat Simple_repeat 1 24 0 389 317 26 118 chr17 6787156 6787462 -82717091 - L2 LINE L2 -19 3253 2976 330 270 117 55 chr17 6787625 6787953 -82716600 + L1MC5 LINE L1 1958 8032 -209 24 53 0 0 chr17 6787966 6788004 -82716549 + AT_rich Low_complexity Low_complexity 1 38 0 310 293 40 67 chr17 6788445 6788698 -82715855 - L2 LINE L2 -1230 2084 1839 274 215 124 41 chr17 6789436 6789557 -82714996 + MLT1H LTR MaLR 408 538 -11 481 282 28 21 chr17 6790644 6790786 -82713767 + MIR SINE MIR 61 203 -59 235 118 0 0 chr17 6790789 6790823 -82713730 + MLT1L LTR MaLR 4 37 -578 474 279 61 92 chr17 6790866 6790936 -82713617 + MLT1J LTR MaLR 111 182 -329 1824 93 61 83 chr17 6790936 6791248 -82713305 + AluSq SINE Alu 1 305 -8 474 279 61 92 chr17 6791248 6791589 -82712964 + MLT1J LTR MaLR 182 509 -2 2184 119 3 7 chr17 6791707 6792017 -82712536 - AluSg SINE Alu -1 309 1 206 281 0 18 chr17 6792042 6792099 -82712454 - L2 LINE L2 -224 3048 2993 948 239 93 89 chr17 6792983 6793081 -82711472 - MLT1H1 LTR MaLR -10 545 449 2359 113 0 3 chr17 6793081 6793391 -82711162 + AluSq SINE Alu 1 309 -4 948 239 93 89 chr17 6793391 6793867 -82710686 - MLT1H1 LTR MaLR -106 449 1 224 319 43 21 chr17 6795229 6795323 -82709230 + MIR SINE MIR 157 252 -10 610 139 14 36 chr17 6797571 6797857 -82706696 + GA-rich Low_complexity Low_complexity 1 279 0 1080 210 47 0 chr17 6799114 6799328 -82705225 - MIR SINE MIR -12 250 27 205 216 39 0 chr17 6800237 6800288 -82704265 + GA-rich Low_complexity Low_complexity 4 56 0 731 303 138 24 chr17 6800527 6800867 -82703686 - L1MC4a LINE L1 -1908 5900 5522 1990 131 0 67 chr17 6800992 6801320 -82703233 - AluJo SINE Alu -6 306 1 256 189 98 82 chr17 6802164 6802286 -82702267 + LTR9 LTR ERV1 1 124 -488 1958 107 0 36 chr17 6802287 6802595 -82701958 + AluSc SINE Alu 1 297 -12 2242 177 46 13 chr17 6802598 6803056 -82701497 + LTR9B LTR ERV1 170 642 -2 1049 183 48 5 chr17 6803675 6803883 -82700670 - MER20 DNA MER1_type 0 219 3 516 187 90 8 chr17 6804274 6804408 -82700145 + L1ME4a LINE L1 5734 5878 -243 478 247 13 83 chr17 6805849 6806098 -82698455 - L1MC/D LINE L1 -385 5736 5565 386 350 19 31 chr17 6806123 6806283 -82698270 + MIR SINE MIR 28 185 -77 2351 134 39 17 chr17 6807028 6807438 -82697115 - MSTB LTR MaLR 0 426 8 242 272 177 44 chr17 6807439 6807597 -82696956 - MIR3 SINE MIR -27 181 3 684 241 70 10 chr17 6809105 6809304 -82695249 - L2 LINE L2 -222 3091 2881 1914 166 33 14 chr17 6809317 6809594 -82694959 - MLT1B LTR MaLR -16 374 87 2117 117 0 0 chr17 6809594 6809876 -82694677 + AluSx SINE Alu 23 304 -8 1914 166 33 14 chr17 6809876 6809965 -82694588 - MLT1B LTR MaLR -303 87 1 413 257 182 14 chr17 6810951 6811099 -82693454 - MIR SINE MIR -34 228 56 231 286 0 0 chr17 6812984 6813040 -82691513 + MIR SINE MIR 92 147 -61 236 179 0 0 chr17 6813385 6813424 -82691129 - MER5A DNA MER1_type 0 189 151 2333 192 11 45 chr17 6813478 6813771 -82690782 + L1MA5 LINE L1 1356 1621 -5168 2480 95 3 0 chr17 6813771 6814076 -82690477 + AluSq SINE Alu 1 306 -7 2333 192 11 45 chr17 6814076 6814356 -82690197 + L1MA5 LINE L1 1621 1909 -4880 230 217 0 0 chr17 6814356 6814402 -82690151 - L1M2c LINE L1 -4844 1945 1900 * 995 168 20 0 chr17 6814400 6814603 -82689950 + L1MA5 LINE L1 3600 3806 -2982 * 7454 130 22 36 chr17 6814583 6817017 -82687536 + L1MA5 LINE L1 4552 6940 -2 25 23 0 23 chr17 6817017 6817035 -82687518 + AT_rich Low_complexity Low_complexity 1 18 -24 2637 80 0 8 chr17 6817035 6817398 -82687155 - L1PA8 LINE L1 0 6172 5813 25 23 0 23 chr17 6817398 6817422 -82687131 + AT_rich Low_complexity Low_complexity 18 42 0 550 205 17 8 chr17 6817437 6817554 -82686999 - MER5A DNA MER1_type -63 126 9 2090 131 3 31 chr17 6817941 6818262 -82686291 - AluSx SINE Alu 0 312 1 213 39 0 0 chr17 6818769 6818795 -82685758 + (CA)n Simple_repeat Simple_repeat 1 26 0 280 298 177 56 chr17 6819308 6819523 -82685030 + L2 LINE L2 3029 3269 -3 267 247 26 26 chr17 6819880 6819957 -82684596 + MIR SINE MIR 56 132 -130 1501 195 35 57 chr17 6821206 6821575 -82682978 - MLT1A2 LTR MaLR 0 374 14 218 360 45 0 chr17 6821743 6821854 -82682699 - L2 LINE L2 -2 3270 3155 307 319 18 26 chr17 6822083 6822196 -82682357 + MIR SINE MIR 37 148 -114 255 257 140 27 chr17 6826283 6826422 -82678131 + MIR SINE MIR 5 153 -55 657 329 40 40 chr17 6826514 6826943 -82677610 + MLT1K LTR MaLR 138 566 -22 198 286 71 14 chr17 6827217 6827287 -82677266 - MIR SINE MIR -70 192 119 685 59 29 0 chr17 6827530 6827632 -82676921 + (TTTC)n Simple_repeat Simple_repeat 3 107 0 839 145 0 0 chr17 6827632 6827749 -82676804 - FLAM_C SINE Alu -26 117 1 434 310 103 17 chr17 6827755 6827797 -82676756 - MIR SINE MIR -56 206 169 1266 242 102 50 chr17 6827797 6828277 -82676276 + MLT1D LTR MaLR 1 505 0 434 310 103 17 chr17 6828277 6828408 -82676145 - MIR SINE MIR -93 169 18 734 283 5 50 chr17 6828440 6828659 -82675894 + MIR SINE MIR 33 241 -21 888 216 64 5 chr17 6828752 6828956 -82675597 - MER20 DNA MER1_type 0 219 4 349 340 31 13 chr17 6829187 6829211 -82675342 + MIR SINE MIR 100 122 -140 6840 60 33 1 chr17 6829211 6830137 -82674416 + L1PA8 LINE L1 5218 6171 -1 349 340 31 13 chr17 6830137 6830271 -82674282 + MIR SINE MIR 122 261 -1 324 250 9 56 chr17 6830745 6830853 -82673700 + MIR SINE MIR 20 122 -86 4780 58 15 5 chr17 6831227 6831835 -82672718 - L1PA7 LINE L1 -1 6153 5540 367 319 26 0 chr17 6831883 6831990 -82672563 - MIR SINE MIR -77 185 76 271 227 0 113 chr17 6831990 6832087 -82672466 + MER91B DNA MER1_type 1 86 -104 1811 203 43 57 chr17 6832569 6833076 -82671477 - MLT1D LTR MaLR -3 502 3 1952 130 3 7 chr17 6833791 6834075 -82670478 + AluSq SINE Alu 1 283 -30 243 0 0 0 chr17 6834078 6834105 -82670448 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 262 294 17 84 chr17 6835420 6835539 -82669014 + MIR SINE MIR 46 156 -106 185 339 0 0 chr17 6836130 6836195 -82668358 + MIR SINE MIR 11 75 -187 23 0 0 0 chr17 6836299 6836322 -82668231 + AT_rich Low_complexity Low_complexity 1 23 0 355 231 0 13 chr17 6836337 6836415 -82668138 + MIR3 SINE MIR 115 191 -17 2069 126 3 10 chr17 6836581 6836882 -82667671 + AluSx SINE Alu 1 299 -13 333 210 6 160 chr17 6838197 6838378 -82666175 + HAL1b LINE L1 1185 1337 -11 516 252 10 57 chr17 6839361 6839552 -82665001 - MIR SINE MIR -6 256 73 287 272 0 43 chr17 6839792 6839884 -82664669 - MLT1H LTR MaLR -415 134 47 191 299 72 31 chr17 6840588 6840685 -82663868 + MIR3 SINE MIR 105 205 -3 338 264 223 34 chr17 6841038 6841103 -82663450 + MER5A DNA MER1_type 13 64 -125 2099 121 10 20 chr17 6841103 6841408 -82663145 + AluSx SINE Alu 1 302 -10 338 264 223 34 chr17 6841408 6841490 -82663063 + MER5A DNA MER1_type 64 188 -1 616 269 106 56 chr17 6841493 6841691 -82662862 + LTR16C LTR ERVL 2 189 -302 2252 201 82 46 chr17 6841691 6842254 -82662299 - MER119 DNA MER1_type 0 583 1 616 269 106 56 chr17 6842254 6842519 -82662034 + LTR16C LTR ERVL 189 488 -3 212 291 103 0 chr17 6842547 6842664 -82661889 - L2 LINE L2 -673 2641 2513 254 324 67 9 chr17 6843276 6843381 -82661172 - MIR SINE MIR -70 192 82 * 289 283 204 16 chr17 6843365 6843488 -82661065 - L2 LINE L2 -4 3309 3210 1690 111 134 0 chr17 6843488 6843750 -82660803 + AluY SINE Alu 1 297 -4 289 283 204 16 chr17 6843750 6843817 -82660736 - L2 LINE L2 -103 3210 3083 1756 244 42 33 chr17 6845225 6845747 -82658806 - MER74B LTR ERVL -58 564 35 2738 84 5 22 chr17 6845747 6846117 -82658436 - THE1B LTR MaLR 0 364 1 1756 244 42 33 chr17 6846117 6846144 -82658409 - MER74B LTR ERVL -587 35 10 484 314 73 16 chr17 6846148 6846393 -82658160 + L2 LINE L2 2867 3125 -188 441 299 208 28 chr17 6846583 6847266 -82657287 + L2 LINE L2 2172 2977 -337 215 61 30 0 chr17 6848012 6848045 -82656508 + (TC)n Simple_repeat Simple_repeat 2 35 0 384 303 35 14 chr17 6848597 6848739 -82655814 - L3 LINE CR1 -86 1491 1347 581 296 38 32 chr17 6848884 6849070 -82655483 - MIR SINE MIR -3 259 73 219 354 53 18 chr17 6849242 6849355 -82655198 + L2 LINE L2 3122 3238 -34 327 317 57 16 chr17 6849519 6849642 -82654911 + MIR3 SINE MIR 6 133 -75 387 233 25 42 chr17 6850102 6850222 -82654331 + L2 LINE L2 1371 1488 -1826 204 282 39 39 chr17 6850576 6850654 -82653899 - MIR SINE MIR -103 105 28 690 263 59 0 chr17 6850943 6851129 -82653424 + MLT1F LTR MaLR 9 205 -337 644 113 0 120 chr17 6851129 6851262 -82653291 - SVA Other Other -406 980 864 263 250 0 36 chr17 6851270 6851354 -82653199 + MLT1F LTR MaLR 216 296 -246 1190 209 25 53 chr17 6851354 6851425 -82653128 - MLT1A1 LTR MaLR 0 365 294 1458 180 3 25 chr17 6851425 6851741 -82652812 + AluSq SINE Alu 2 310 -3 1190 209 25 53 chr17 6851741 6851990 -82652563 - MLT1A1 LTR MaLR -71 294 54 818 166 140 47 chr17 6852204 6852439 -82652114 + MLT1F LTR MaLR 286 542 0 212 253 0 27 chr17 6853512 6853587 -82650966 + L2 LINE L2 3015 3087 -185 250 216 57 45 chr17 6854118 6854206 -82650347 + L3 LINE CR1 575 663 -914 509 303 88 43 chr17 6855437 6855481 -82649072 - L1ME4a LINE L1 -233 5888 5847 2245 102 3 10 chr17 6855481 6855784 -82648769 + AluY SINE Alu 1 301 -10 509 303 88 43 chr17 6855784 6856205 -82648348 - L1ME4a LINE L1 -274 5847 5402 1205 187 20 24 chr17 6856289 6856535 -82648018 - L1PB4 LINE L1 -2 6154 5910 417 182 11 0 chr17 6856535 6856623 -82647930 + L1PB4 LINE L1 5762 5850 -306 2323 113 0 0 chr17 6856644 6856953 -82647600 - AluSg SINE Alu -1 309 1 3692 152 7 8 chr17 6857013 6857627 -82646926 - L1PA16 LINE L1 0 6166 5554 504 200 0 23 chr17 6857629 6857759 -82646794 + L1 LINE L1 3209 3335 -2811 5744 170 20 44 chr17 6857869 6859344 -82645209 + L1P4 LINE L1 3994 5429 -737 1603 141 0 72 chr17 6859344 6859667 -82644886 + AluSx SINE Alu 31 312 0 5744 170 20 44 chr17 6859667 6859729 -82644824 + L1P4 LINE L1 5429 5491 -675 320 267 14 62 chr17 6860279 6860425 -82644128 - LTR33 LTR ERVL -28 493 355 1406 213 92 77 chr17 6860425 6860903 -82643650 + MLT1E LTR MaLR 1 485 -108 210 108 0 54 chr17 6860917 6860932 -82643621 + (GAAAA)n Simple_repeat Simple_repeat 2 16 -20 2008 113 0 31 chr17 6860932 6861252 -82643301 + AluSg SINE Alu 1 310 0 210 108 0 54 chr17 6861252 6861273 -82643280 + (GAAAA)n Simple_repeat Simple_repeat 16 36 0 1452 185 122 24 chr17 6861771 6862100 -82642453 + MLT1A1 LTR MaLR 5 365 0 211 261 89 19 chr17 6862227 6862332 -82642221 - MIR3 SINE MIR -38 170 56 198 71 0 0 chr17 6862645 6862673 -82641880 + (GAAAA)n Simple_repeat Simple_repeat 2 29 0 380 274 82 30 chr17 6863282 6863417 -82641136 + MIR3 SINE MIR 67 208 0 2048 156 0 13 chr17 6863431 6863739 -82640814 + AluJb SINE Alu 1 304 -8 2359 79 0 0 chr17 6863816 6864120 -82640433 - AluY SINE Alu -7 304 1 26 64 0 0 chr17 6864300 6864347 -82640206 + AT_rich Low_complexity Low_complexity 1 47 0 464 290 121 22 chr17 6864727 6864958 -82639595 + MIR SINE MIR 5 258 -4 402 57 0 0 chr17 6864995 6865048 -82639505 + (TCCA)n Simple_repeat Simple_repeat 1 53 0 220 344 32 43 chr17 6865052 6865145 -82639408 - L2 LINE L2 -16 3297 3206 333 247 26 0 chr17 6865505 6865582 -82638971 + MIR SINE MIR 163 241 -21 2389 98 0 0 chr17 6866027 6866322 -82638231 + AluSg SINE Alu 1 295 -15 185 323 141 10 chr17 6867367 6867466 -82637087 + MIR SINE MIR 36 147 -61 808 171 0 0 chr17 6867470 6867587 -82636966 + FLAM_C SINE Alu 1 117 -26 712 57 29 0 chr17 6867587 6867692 -82636861 + (GAAA)n Simple_repeat Simple_repeat 3 110 0 792 272 62 49 chr17 6867942 6868310 -82636243 + MLT1H LTR MaLR 29 401 -148 486 228 0 0 chr17 6869005 6869163 -82635390 + (ATG)n Simple_repeat Simple_repeat 1 158 0 252 100 0 0 chr17 6869171 6869211 -82635342 + (ATGGTG)n Simple_repeat Simple_repeat 1 40 0 411 367 82 46 chr17 6869307 6869699 -82634854 + L2 LINE L2 2866 3271 -1 222 37 0 0 chr17 6870306 6870333 -82634220 + (CA)n Simple_repeat Simple_repeat 2 28 0 517 292 56 34 chr17 6870742 6870920 -82633633 - MIR SINE MIR -12 250 69 664 288 50 42 chr17 6871508 6872005 -82632548 - L1M4 LINE L1 -2930 3216 2716 328 283 20 30 chr17 6872107 6872206 -82632347 - L1M4 LINE L1 -3600 2546 2449 3259 133 8 10 chr17 6872277 6872789 -82631764 + Tigger3b DNA MER2_type 1 511 -720 495 285 18 18 chr17 6872903 6873068 -82631485 + MER90 LTR ERV1 445 609 -5 209 269 0 0 chr17 6873890 6873942 -82630611 + (CA)n Simple_repeat Simple_repeat 2 53 0 340 236 73 41 chr17 6874197 6874320 -82630233 + L2 LINE L2 2964 3090 -182 947 258 70 54 chr17 6874379 6874806 -82629747 - MLT1J LTR MaLR -8 503 70 2075 118 17 10 chr17 6874817 6875113 -82629440 + AluSq SINE Alu 1 298 -15 376 194 0 58 chr17 6875506 6875609 -82628944 + LTR67 LTR ERVL 458 554 -3 698 151 8 0 chr17 6875669 6875788 -82628765 - L1MA4 LINE L1 -6 6294 6175 1905 134 0 7 chr17 6876146 6876465 -82628088 + AluSc SINE Alu 1 317 0 2646 211 25 13 chr17 6877301 6877330 -82627223 + MER68 LTR ERV1 1 28 -534 1803 135 4 4 chr17 6877330 6877632 -82626921 - AluSq SINE Alu 0 319 18 2646 211 25 13 chr17 6877632 6878156 -82626397 + MER68 LTR ERV1 28 562 0 605 167 0 0 chr17 6878693 6878795 -82625758 + U6 snRNA snRNA 1 102 -5 2472 62 0 0 chr17 6878795 6879087 -82625466 - AluY SINE Alu -19 292 1 458 150 40 30 chr17 6879105 6879205 -82625348 + L1MA6 LINE L1 6200 6300 0 386 252 84 15 chr17 6879303 6879434 -82625119 - MIR SINE MIR -115 147 8 2152 127 17 0 chr17 6879995 6880295 -82624258 + AluSg SINE Alu 1 305 -5 375 23 0 0 chr17 6880312 6880356 -82624197 + (GGA)n Simple_repeat Simple_repeat 1 44 0 609 310 56 19 chr17 6880716 6880984 -82623569 - L1ME1 LINE L1 -4 6162 5885 187 220 51 51 chr17 6881387 6881446 -82623107 - L2 LINE L2 -54 3218 3160 768 186 11 57 chr17 6881895 6882072 -82622481 - MER5B DNA MER1_type -9 169 1 559 316 36 0 chr17 6883227 6883395 -82621158 + MIR SINE MIR 89 262 0 406 334 37 62 chr17 6883455 6883793 -82620760 - L1MEc LINE L1 -3787 2428 2140 25 0 0 0 chr17 6884586 6884611 -82619942 + AT_rich Low_complexity Low_complexity 1 25 0 2319 97 20 0 chr17 6884861 6885160 -82619393 - AluSg SINE Alu -5 305 1 306 281 238 5 chr17 6885527 6885712 -82618841 + L3 LINE CR1 1261 1488 -89 2049 145 0 3 chr17 6886256 6886559 -82617994 - AluSc SINE Alu -7 302 1 2325 110 7 0 chr17 6887901 6888211 -82616342 + AluSx SINE Alu 1 312 0 1799 106 0 8 chr17 6888403 6888639 -82615914 - AluSg SINE Alu -16 294 61 225 250 0 36 chr17 6888678 6888762 -82615791 + (TA)n Simple_repeat Simple_repeat 1 81 0 369 335 56 63 chr17 6889041 6889328 -82615225 - L1 LINE L1 -853 5293 5009 935 315 195 25 chr17 6889366 6890059 -82614494 + L2 LINE L2 2149 2959 -355 441 109 0 0 chr17 6890084 6890148 -82614405 - AluSp/q SINE Alu -13 300 237 983 106 15 0 chr17 6890344 6890476 -82614077 + AluY SINE Alu 1 134 -177 2282 92 7 3 chr17 6890476 6890770 -82613783 + AluSc SINE Alu 1 295 -14 2433 101 0 0 chr17 6891124 6891431 -82613122 + AluSq SINE Alu 1 307 -6 4213 276 90 25 chr17 6891438 6893613 -82610940 + L1 LINE L1 2663 4977 -1169 997 181 24 52 chr17 6893615 6893825 -82610728 + MLT1A2 LTR MaLR 11 214 -160 624 220 0 8 chr17 6893841 6893973 -82610580 + L1MD2 LINE L1 722 852 -5557 * 882 69 0 0 chr17 6893967 6894083 -82610470 - L1PA5 LINE L1 -167 5987 5872 1279 55 0 0 chr17 6894083 6894242 -82610311 + L1PA5 LINE L1 5992 6154 0 261 0 0 0 chr17 6894248 6894277 -82610276 + (TA)n Simple_repeat Simple_repeat 1 29 0 1443 202 15 3 chr17 6894277 6894599 -82609954 + L1MD2 LINE L1 841 1166 -5243 1188 195 106 44 chr17 6894644 6894829 -82609724 + L1MD2 LINE L1 3100 3272 -3134 2416 89 7 0 chr17 6894829 6895133 -82609420 + AluSc SINE Alu 1 306 -3 1188 195 106 44 chr17 6895133 6895382 -82609171 + L1MD2 LINE L1 3272 3561 -2845 725 147 66 22 chr17 6895384 6895520 -82609033 + FLAM_C SINE Alu 2 143 0 2011 246 37 26 chr17 6895520 6895681 -82608872 + L1MD2 LINE L1 3953 4111 -2295 1797 167 43 7 chr17 6895681 6895981 -82608572 + AluJb SINE Alu 1 311 -1 2011 246 37 26 chr17 6895981 6896468 -82608085 + L1MD2 LINE L1 4111 4608 -1798 958 54 0 0 chr17 6896468 6896580 -82607973 + AluSg/x SINE Alu 187 298 -12 7828 50 10 12 chr17 6896617 6898083 -82606470 + SVA Other Other 3 1386 0 25 0 0 0 chr17 6898116 6898141 -82606412 + AT_rich Low_complexity Low_complexity 1 25 0 448 245 99 52 chr17 6898335 6898678 -82605875 + L1MC5 LINE L1 7389 7747 -214 2829 215 35 49 chr17 6898692 6899053 -82605500 + L1MD2 LINE L1 4602 4966 -1653 1975 98 77 21 chr17 6899053 6899339 -82605214 + AluY SINE Alu 1 302 -9 2829 215 35 49 chr17 6899339 6899620 -82604933 + L1MD2 LINE L1 4966 5249 -1370 2501 75 3 0 chr17 6899620 6899925 -82604628 - AluSp SINE Alu -7 306 1 2829 215 35 49 chr17 6899925 6900774 -82603779 + L1MD2 LINE L1 5249 6079 -540 1203 146 0 0 chr17 6900779 6900950 -82603603 + AluSg/x SINE Alu 129 299 -11 749 128 96 8 chr17 6900960 6901085 -82603468 + FLAM_C SINE Alu 8 143 0 2221 121 0 34 chr17 6901085 6901408 -82603145 + AluSx SINE Alu 1 312 0 1685 235 23 11 chr17 6901413 6901855 -82602698 + L1MD2 LINE L1 6084 6530 -89 401 138 25 0 chr17 6901908 6901988 -82602565 + L1MD2 LINE L1 6537 6618 -1 2111 142 0 13 chr17 6901998 6902300 -82602253 + AluSq SINE Alu 1 298 -15 234 258 16 0 chr17 6902344 6902406 -82602147 + (TGAA)n Simple_repeat Simple_repeat 3 65 0 1228 139 0 0 chr17 6902428 6902594 -82601959 + AluJo SINE Alu 1 166 -146 205 271 0 0 chr17 6903086 6903134 -82601419 + MIR SINE MIR 194 241 -21 341 245 0 60 chr17 6904379 6904683 -82599870 + (CA)n Simple_repeat Simple_repeat 1 285 0 288 0 0 0 chr17 6904699 6904731 -82599822 + (CA)n Simple_repeat Simple_repeat 2 33 0 1872 173 10 0 chr17 6905422 6905728 -82598825 - AluJb SINE Alu -3 309 1 1888 104 4 0 chr17 6906085 6906326 -82598227 + AluSx SINE Alu 27 268 -44 404 339 93 32 chr17 6906468 6906608 -82597945 - L1MC/D LINE L1 -747 5399 5269 1423 25 0 0 chr17 6906608 6906771 -82597782 + L1PA5 LINE L1 5987 6149 -5 404 339 93 32 chr17 6906771 6907178 -82597375 - L1MC/D LINE L1 -877 5269 4890 2545 51 0 3 chr17 6907437 6907733 -82596820 + AluY SINE Alu 1 295 -16 349 315 195 15 chr17 6907746 6908013 -82596540 - L1MC/D LINE L1 -1722 4424 4110 2069 133 6 38 chr17 6908067 6908382 -82596171 - AluSq SINE Alu -8 305 1 228 244 0 0 chr17 6908666 6908707 -82595846 - MIR SINE MIR -132 76 36 954 9 0 0 chr17 6908956 6909064 -82595489 + AluY SINE Alu 203 310 -1 449 283 45 71 chr17 6909571 6909734 -82594819 - MIR SINE MIR -69 193 34 2334 98 0 0 chr17 6909734 6910029 -82594524 - AluSx SINE Alu -17 295 1 449 283 45 71 chr17 6910029 6910063 -82594490 - MIR SINE MIR -228 34 1 2398 70 10 3 chr17 6910661 6910962 -82593591 - AluSq SINE Alu -10 303 1 396 297 27 27 chr17 6910973 6911158 -82593395 + L2 LINE L2 1705 1889 -1425 850 248 71 40 chr17 6911160 6911511 -82593042 + MER92A LTR ERV1 1 362 -50 570 297 221 26 chr17 6911526 6912636 -82591917 + L2 LINE L2 1888 3218 -95 381 93 0 0 chr17 6912666 6912720 -82591833 + (TGAA)n Simple_repeat Simple_repeat 3 56 0 295 294 117 22 chr17 6913817 6913997 -82590556 + LTR16A1 LTR ERVL 168 364 -93 268 356 11 0 chr17 6914830 6914917 -82589636 + L2 LINE L2 3121 3208 -64 410 304 31 58 chr17 6915259 6915450 -82589103 - MIR3 SINE MIR -20 188 3 303 258 0 0 chr17 6916034 6916100 -82588453 + MIR SINE MIR 78 143 -65 744 248 18 91 chr17 6916558 6916832 -82587721 - MIR SINE MIR 0 262 9 2340 88 7 0 chr17 6917089 6917383 -82587170 - AluSg SINE Alu -10 300 5 769 199 30 6 chr17 6918178 6918344 -82586209 - MLT1B LTR MaLR 0 467 298 * 798 166 0 45 chr17 6918325 6918482 -82586071 - MLT1B LTR MaLR -207 183 34 513 182 0 0 chr17 6918494 6918593 -82585960 + (CA)n Simple_repeat Simple_repeat 2 100 0 396 343 69 23 chr17 6918939 6919114 -82585439 - L2 LINE L2 -1 3271 3089 938 217 4 71 chr17 6919177 6919417 -82585136 + MER58A DNA MER1_type 1 224 0 322 349 71 0 chr17 6919530 6919656 -82584897 + MIR3 SINE MIR 49 183 -25 2179 136 0 0 chr17 6920055 6920364 -82584189 + AluSx SINE Alu 4 312 0 391 235 105 45 chr17 6920391 6920616 -82583937 + MIR SINE MIR 19 260 -2 412 266 49 21 chr17 6920668 6920811 -82583742 - MIR3 SINE MIR -58 150 4 211 289 96 0 chr17 6920821 6920904 -82583649 + L2 LINE L2 3182 3272 0 231 103 0 0 chr17 6921274 6921313 -82583240 + (TTTTA)n Simple_repeat Simple_repeat 2 40 0 1901 122 0 0 chr17 6921314 6921568 -82582985 - AluSc SINE Alu -55 254 1 364 391 39 6 chr17 6922047 6922226 -82582327 + HAL1 LINE L1 1613 1797 -710 1987 118 0 77 chr17 6922510 6922833 -82581720 + AluSx SINE Alu 3 300 -12 402 296 68 46 chr17 6922851 6922901 -82581652 + L1ME LINE L1 5267 5314 -807 2346 98 0 3 chr17 6922901 6923198 -82581355 + AluSx SINE Alu 1 296 -16 2478 65 7 3 chr17 6923200 6923507 -82581046 + AluY SINE Alu 1 308 -3 402 296 68 46 chr17 6923507 6923786 -82580767 + L1ME LINE L1 5314 5603 -518 3907 128 32 8 chr17 6924076 6924691 -82579862 + L1PA16 LINE L1 5533 6162 -4 760 274 91 11 chr17 6924850 6925223 -82579330 + LTR33A LTR ERVL 121 523 0 349 292 289 0 chr17 6925223 6925535 -82579018 - L2 LINE L2 -517 2797 2396 252 0 0 0 chr17 6925540 6925568 -82578985 + (TTTTG)n Simple_repeat Simple_repeat 4 31 0 1771 118 4 4 chr17 6925614 6925859 -82578694 - AluSq SINE Alu -11 302 58 309 318 20 47 chr17 6926717 6926865 -82577688 + MIR SINE MIR 63 206 -56 2328 96 23 0 chr17 6927587 6927890 -82576663 + AluSg SINE Alu 1 310 0 221 283 283 26 chr17 6928002 6928193 -82576360 - MIR SINE MIR -1 261 22 306 0 0 0 chr17 6928931 6928965 -82575588 + (TG)n Simple_repeat Simple_repeat 2 35 0 201 143 0 0 chr17 6928966 6929001 -82575552 + (GA)n Simple_repeat Simple_repeat 2 36 0 308 253 76 0 chr17 6929040 6929119 -82575434 + L2 LINE L2 3152 3236 -36 407 257 53 9 chr17 6929197 6929310 -82575243 + L2 LINE L2 3188 3305 -8 277 320 155 39 chr17 6929365 6929705 -82574848 + L3 LINE CR1 1116 1508 -69 1050 154 64 86 chr17 6929705 6929850 -82574703 + MER30 DNA MER1_type 2 142 -88 2267 90 0 23 chr17 6929850 6930150 -82574403 + AluSg SINE Alu 1 293 -17 1050 154 64 86 chr17 6930150 6930237 -82574316 + MER30 DNA MER1_type 142 229 -1 277 320 155 39 chr17 6930237 6930284 -82574269 + L3 LINE CR1 1508 1548 -29 2338 96 0 0 chr17 6930731 6931023 -82573530 + AluSg SINE Alu 1 292 -18 593 279 11 34 chr17 6931221 6931400 -82573153 + MIR SINE MIR 29 203 -59 1173 282 95 36 chr17 6931974 6932502 -82572051 + L2 LINE L2 2222 2780 -534 1846 42 0 30 chr17 6932865 6933102 -82571451 + L1PA5 LINE L1 5925 6154 0 208 299 72 0 chr17 6933110 6933207 -82571346 + L2 LINE L2 2766 2869 -445 578 175 0 10 chr17 6933888 6933991 -82570562 + MLT1C LTR MaLR 1 102 -365 2239 88 0 7 chr17 6933992 6934275 -82570278 - AluSc SINE Alu -8 301 21 254 200 0 0 chr17 6934277 6934332 -82570221 - L1MC4 LINE L1 -540 7502 7448 1844 165 8 58 chr17 6934348 6934741 -82569812 + MLT1C LTR MaLR 95 467 0 2469 245 120 20 chr17 6934741 6935912 -82568641 + L1MC4 LINE L1 6482 7713 -95 331 269 0 119 chr17 6935999 6936053 -82568500 - MER5A DNA MER1_type -63 126 96 2376 116 0 0 chr17 6936053 6936363 -82568190 + AluSx SINE Alu 1 310 -2 331 269 0 119 chr17 6936363 6936442 -82568111 - MER5A DNA MER1_type -93 96 9 450 275 76 18 chr17 6936456 6936627 -82567926 + L2 LINE L2 2880 3060 -253 2122 190 47 19 chr17 6936687 6937156 -82567397 - MLT1D LTR MaLR -2 503 22 277 257 67 12 chr17 6937258 6937383 -82567170 + MIR SINE MIR 60 191 -65 184 379 29 19 chr17 6938216 6938319 -82566234 - L2 LINE L2 -19 3294 3191 859 72 7 7 chr17 6938522 6938660 -82565893 + (CA)n Simple_repeat Simple_repeat 2 139 0 3518 148 2 29 chr17 6938673 6938724 -82565829 - L1PA15 LINE L1 0 6165 6114 275 0 0 28 chr17 6938724 6938760 -82565793 + (TTTTG)n Simple_repeat Simple_repeat 1 35 0 1987 83 0 0 chr17 6938760 6939000 -82565553 - AluSg SINE Alu -31 279 40 3518 148 2 29 chr17 6939000 6939537 -82565016 - L1PA15 LINE L1 -49 6116 5592 2230 101 14 0 chr17 6939685 6939973 -82564580 - AluSc SINE Alu -17 292 1 327 312 71 51 chr17 6940868 6941020 -82563533 + L2 LINE L2 2812 2972 -300 420 20 0 0 chr17 6941020 6941069 -82563484 + (CA)n Simple_repeat Simple_repeat 1 49 0 327 312 71 51 chr17 6941069 6941169 -82563384 + L2 LINE L2 2972 3069 -203 2381 116 0 0 chr17 6941810 6942120 -82562433 + AluSg SINE Alu 1 310 0 2092 104 50 0 chr17 6942650 6942929 -82561624 - AluSq SINE Alu -6 307 15 190 226 0 94 chr17 6943721 6943774 -82560779 - L2 LINE L2 -86 3227 3180 3078 103 53 0 chr17 6943783 6944218 -82560335 + LTR22A LTR ERVK 1 458 0 305 302 133 46 chr17 6944560 6944724 -82559829 + MIR SINE MIR 31 211 -51 1011 191 3 6 chr17 6945306 6945619 -82558934 + (CAT)n Simple_repeat Simple_repeat 2 313 0 541 315 24 33 chr17 6945621 6945834 -82558719 - MIR SINE MIR -1 261 51 2162 108 24 0 chr17 6946093 6946380 -82558173 + AluSg SINE Alu 1 294 -16 365 297 18 0 chr17 6946716 6946827 -82557726 + MIR3 SINE MIR 82 194 -14 2117 125 0 0 chr17 6947242 6947585 -82556968 + AluSg SINE Alu 1 343 0 297 257 28 55 chr17 6947739 6947848 -82556705 + MIR SINE MIR 74 179 -83 596 299 17 17 chr17 6948029 6948203 -82556350 + MIR SINE MIR 41 214 -48 2322 93 14 0 chr17 6948973 6949264 -82555289 - AluSx SINE Alu -17 295 1 627 284 65 20 chr17 6949685 6950040 -82554513 - L1ME3 LINE L1 -277 5885 5515 426 254 27 9 chr17 6950046 6950156 -82554397 - MIR SINE MIR -61 147 36 2139 119 3 7 chr17 6951047 6951357 -82553196 - AluSc SINE Alu 0 309 1 233 361 25 25 chr17 6951358 6951405 -82553148 + L2 LINE L2 3149 3195 -77 253 231 31 0 chr17 6951405 6951470 -82553083 + MIR SINE MIR 193 259 -3 446 299 148 31 chr17 6951855 6952055 -82552498 - MLT1I LTR MaLR 0 409 163 2657 194 56 6 chr17 6952055 6952595 -82551958 + MLT1F1 LTR MaLR 1 567 0 446 299 148 31 chr17 6952595 6952685 -82551868 - MLT1I LTR MaLR -246 163 85 187 283 0 19 chr17 6952825 6952878 -82551675 + L2 LINE L2 2701 2752 -562 187 307 202 23 chr17 6952890 6953108 -82551445 + L2 LINE L2 3016 3272 0 324 161 0 0 chr17 6953111 6953173 -82551380 + (TGGA)n Simple_repeat Simple_repeat 1 62 0 259 282 94 8 chr17 6954083 6954102 -82550451 - MIR SINE MIR -71 191 175 2252 101 0 28 chr17 6954102 6954383 -82550170 + AluY SINE Alu 1 274 -37 218 0 95 0 chr17 6954383 6954425 -82550128 + A-rich Low_complexity Low_complexity 1 46 0 2252 101 0 28 chr17 6954425 6954461 -82550092 + AluY SINE Alu 274 309 -2 259 282 94 8 chr17 6954461 6954558 -82549995 - MIR SINE MIR -87 175 65 482 285 26 65 chr17 6954565 6954781 -82549772 - MIR3 SINE MIR -51 211 3 2724 93 132 5 chr17 6954943 6955374 -82549179 - LTR19A LTR ERV1 0 486 1 642 272 132 55 chr17 6956257 6956800 -82547753 - MLT1H LTR MaLR -3 552 1 611 261 64 80 chr17 6957905 6958154 -82546399 + MIR SINE MIR 2 246 -16 425 268 8 24 chr17 6958202 6958325 -82546228 - MIR SINE MIR -140 122 2 490 257 56 0 chr17 6958332 6958476 -82546077 + MIR SINE MIR 84 235 -27 732 260 28 0 chr17 6958495 6958676 -82545877 + MIR SINE MIR 63 248 -14 2373 89 7 3 chr17 6958738 6959040 -82545513 - AluSx SINE Alu -9 303 1 2324 117 0 3 chr17 6959430 6959737 -82544816 - AluSq SINE Alu -7 306 1 482 297 57 38 chr17 6960063 6960275 -82544278 - MIR SINE MIR 0 262 47 726 184 207 0 chr17 6960302 6960476 -82544077 + MIR SINE MIR 21 230 -32 679 144 18 0 chr17 6960602 6960713 -82543840 + MER5A DNA MER1_type 6 118 -71 1528 213 23 35 chr17 6960713 6960869 -82543684 + MLT1A1 LTR MaLR 1 157 -208 2467 84 0 0 chr17 6960869 6961166 -82543387 + AluSq SINE Alu 1 297 -16 1528 213 23 35 chr17 6961166 6961357 -82543196 + MLT1A1 LTR MaLR 157 344 -21 240 329 0 0 chr17 6961370 6961440 -82543113 + MER5A DNA MER1_type 120 189 0 407 357 55 6 chr17 6961456 6961638 -82542915 + MIR SINE MIR 22 212 -50 206 276 35 0 chr17 6962539 6962597 -82541956 - L3 LINE CR1 -127 1450 1391 625 206 103 7 chr17 6962601 6962747 -82541806 + MER45A DNA AcHobo 16 175 -3 752 267 6 0 chr17 6962880 6963045 -82541508 - MER96 DNA MER1_type? 0 175 10 316 217 0 0 chr17 6963257 6963317 -82541236 + MER5A DNA MER1_type 21 80 -109 2118 162 28 0 chr17 6963324 6963683 -82540870 - L1MB1 LINE L1 -356 5812 5444 351 209 0 0 chr17 6963678 6963745 -82540808 + L1MB1 LINE L1 5839 5905 -263 * 1241 143 10 0 chr17 6963746 6963955 -82540598 + MER2 DNA MER2_type 1 211 -134 225 137 20 20 chr17 6963956 6964007 -82540546 + (TATTG)n Simple_repeat Simple_repeat 3 53 0 1080 175 10 0 chr17 6964083 6964283 -82540270 + L1MB1 LINE L1 5905 6106 -62 1262 131 11 0 chr17 6964294 6964477 -82540076 + AluSg/x SINE Alu 120 304 -8 269 136 0 0 chr17 6964477 6964521 -82540032 + L1MB1 LINE L1 6124 6167 -1 340 221 0 63 chr17 6964540 6964635 -82539918 + MER5A DNA MER1_type 61 149 -40 4155 193 38 10 chr17 6964892 6966048 -82538505 + L1MB4 LINE L1 4944 6135 -45 2022 107 3 40 chr17 6966064 6966364 -82538189 + AluSp SINE Alu 1 289 -24 186 351 39 0 chr17 6966519 6966596 -82537957 - MIR3 SINE MIR -17 191 112 554 239 42 24 chr17 6966876 6967034 -82537519 + MIR3 SINE MIR 34 197 -54 25 0 0 0 chr17 6967034 6967059 -82537494 + AT_rich Low_complexity Low_complexity 1 25 0 333 0 0 0 chr17 6967215 6967252 -82537301 + (TG)n Simple_repeat Simple_repeat 2 38 0 525 288 36 7 chr17 6967340 6967479 -82537074 - MIR SINE MIR -95 167 25 1212 117 0 103 chr17 6967687 6967900 -82536653 + AluSx SINE Alu 1 191 -121 347 85 0 0 chr17 6967904 6967951 -82536602 + AluSc SINE Alu 61 107 -192 1488 113 0 5 chr17 6968006 6968201 -82536352 + AluSg/x SINE Alu 108 301 -11 1529 257 36 5 chr17 6968447 6968859 -82535694 + LTR16A LTR ERVL 26 450 0 1059 238 141 35 chr17 6969597 6970050 -82534503 - MLT1D LTR MaLR -4 501 1 403 297 27 0 chr17 6970324 6970435 -82534118 - MER81 DNA DNA 0 114 1 1103 190 100 35 chr17 6970729 6970883 -82533670 - MLT1C LTR MaLR -2 465 323 2069 116 71 100 chr17 6970883 6971322 -82533231 + MSTA LTR MaLR 3 428 0 1103 190 100 35 chr17 6971322 6971457 -82533096 - MLT1C LTR MaLR -144 323 157 264 362 11 11 chr17 6971489 6971583 -82532970 + L2 LINE L2 3117 3210 -62 259 330 11 11 chr17 6971595 6971686 -82532867 - L3 LINE CR1 -97 1480 1390 705 272 80 34 chr17 6971943 6972267 -82532286 + L1MC4a LINE L1 5391 5729 -392 446 335 41 10 chr17 6972281 6972475 -82532078 + L1MC4a LINE L1 5793 5992 -1816 317 291 75 22 chr17 6973381 6973515 -82531038 + HAL1b LINE L1 1201 1341 -7 405 299 37 43 chr17 6973601 6973788 -82530765 - MIR3 SINE MIR -3 205 20 225 0 0 0 chr17 6975481 6975506 -82529047 + (CA)n Simple_repeat Simple_repeat 1 25 0 360 106 0 15 chr17 6975635 6975676 -82528877 - MLT2D LTR ERVL 0 520 479 405 0 0 0 chr17 6975676 6975721 -82528832 + (TG)n Simple_repeat Simple_repeat 2 46 0 360 106 0 15 chr17 6975721 6975745 -82528808 - MLT2D LTR ERVL -41 479 456 198 240 0 0 chr17 6975760 6975810 -82528743 + (TA)n Simple_repeat Simple_repeat 2 51 0 207 0 0 0 chr17 6975810 6975833 -82528720 + (GA)n Simple_repeat Simple_repeat 2 24 0 1043 185 35 142 chr17 6975839 6976234 -82528319 - MLT2D LTR ERVL -61 353 1 255 227 91 0 chr17 6976311 6976377 -82528176 - MIR SINE MIR -74 188 117 622 289 28 28 chr17 6976404 6976615 -82527938 + MIR SINE MIR 52 262 0 2332 171 76 78 chr17 6977835 6978390 -82526163 + MLT2B3 LTR ERVL 1 554 0 449 263 23 8 chr17 6979112 6979245 -82525308 - LTR16C LTR ERVL 0 491 357 216 191 0 0 chr17 6979346 6979393 -82525160 + T-rich Low_complexity Low_complexity 1 47 0 2396 82 10 3 chr17 6979396 6979699 -82524854 - AluSc SINE Alu -4 305 1 315 276 86 65 chr17 6979701 6979933 -82524620 - LTR16C LTR ERVL -253 238 2 522 358 39 25 chr17 6980043 6980322 -82524231 - L3 LINE CR1 -2 1575 1293 2013 188 86 0 chr17 6980409 6980851 -82523702 + MLT1D LTR MaLR 26 505 0 717 320 114 53 chr17 6980896 6981389 -82523164 - L3 LINE CR1 -354 1223 701 341 267 11 33 chr17 6982022 6982112 -82522441 - L3 LINE CR1 -903 674 587 2543 181 52 81 chr17 6982229 6982582 -82521971 + L1MB5 LINE L1 5258 5312 -862 1669 193 0 3 chr17 6982582 6982882 -82521671 + AluJo SINE Alu 1 299 -13 2543 181 52 81 chr17 6982882 6983389 -82521164 + L1MB5 LINE L1 5312 5832 -342 235 262 82 0 chr17 6983534 6983595 -82520958 + L3 LINE CR1 609 674 -903 597 193 0 17 chr17 6983632 6983751 -82520802 + L1MB5 LINE L1 6058 6174 0 1984 135 66 23 chr17 6983802 6984151 -82520402 - THE1B LTR MaLR 0 364 1 228 143 41 0 chr17 6984760 6984809 -82519744 + MER112 DNA MER1_type 106 156 -104 1945 130 33 0 chr17 6985160 6985460 -82519093 + AluSg SINE Alu 1 310 0 320 327 46 7 chr17 6985806 6986081 -82518472 + L1ME LINE L1 5373 5704 -417 433 268 41 8 chr17 6986145 6986268 -82518285 - MIR SINE MIR -51 211 85 430 182 0 0 chr17 6986350 6986416 -82518137 - L2 LINE L2 0 3272 3207 239 200 20 0 chr17 6986663 6986713 -82517840 - L2 LINE L2 0 3313 3263 1959 123 0 3 chr17 6986787 6987087 -82517466 + AluSx SINE Alu 1 299 -13 23 0 0 0 chr17 6987202 6987225 -82517328 + AT_rich Low_complexity Low_complexity 1 23 0 324 75 15 30 chr17 6987564 6987631 -82516922 + (TAAA)n Simple_repeat Simple_repeat 4 69 0 2121 55 7 0 chr17 6987786 6988058 -82516495 - AluY SINE Alu -1 310 37 439 70 42 0 chr17 6988068 6988139 -82516414 + T-rich Low_complexity Low_complexity 3 76 0 1641 178 10 0 chr17 6988141 6988444 -82516109 - AluSg SINE Alu -4 306 1 278 314 32 8 chr17 6989188 6989312 -82515241 + HAL1 LINE L1 23 149 -2358 2060 103 3 3 chr17 6989326 6989618 -82514935 + AluSq SINE Alu 1 292 -21 1077 171 6 0 chr17 6989939 6990115 -82514438 - MLT1F1 LTR MaLR 0 567 391 585 267 48 0 chr17 6990085 6990231 -82514322 + MER58B DNA MER1_type 150 302 -39 * 714 210 8 0 chr17 6990238 6990362 -82514191 - MER58B DNA MER1_type -22 319 195 * 1539 196 149 9 chr17 6990351 6990687 -82513866 - MLT1F1 LTR MaLR -184 383 1 782 274 71 110 chr17 6990758 6991544 -82513009 + HAL1 LINE L1 745 1471 -1036 1238 204 14 5 chr17 6991544 6991765 -82512788 + MER58A DNA MER1_type 2 224 0 782 274 71 110 chr17 6991765 6992169 -82512384 + HAL1 LINE L1 1471 1889 -618 2100 116 7 7 chr17 6993036 6993339 -82511214 + AluSq SINE Alu 1 303 -10 1919 118 3 41 chr17 6993758 6994073 -82510480 - AluSx SINE Alu -9 303 1 483 203 15 68 chr17 6994519 6994652 -82509901 - MIR SINE MIR -115 147 22 264 273 0 30 chr17 6995733 6995838 -82508715 + (CACG)n Simple_repeat Simple_repeat 1 101 0 2065 118 17 0 chr17 6996557 6996853 -82507700 + AluSx SINE Alu 1 301 -11 264 301 110 43 chr17 6997199 6997408 -82507145 - L2 LINE L2 -526 2788 2566 387 211 0 0 chr17 6997568 6997658 -82506895 + (CA)n Simple_repeat Simple_repeat 1 90 0 621 257 0 0 chr17 6997705 6997884 -82506669 + (CA)n Simple_repeat Simple_repeat 1 179 0 223 223 202 32 chr17 6998058 6998152 -82506401 - MIR SINE MIR -82 126 17 181 256 0 0 chr17 6998166 6998209 -82506344 - MIR3 SINE MIR -26 182 140 341 248 87 52 chr17 6998608 6998763 -82505790 + MIR3 SINE MIR 35 192 -42 1970 104 3 10 chr17 6998888 6999200 -82505353 + AluY SINE Alu 3 312 0 748 254 174 40 chr17 6999204 6999601 -82504952 - MLT1J LTR MaLR -51 460 11 184 321 71 0 chr17 6999829 6999913 -82504640 - L2 LINE L2 -695 2619 2530 275 227 91 11 chr17 7001182 7001270 -82503283 + L2 LINE L2 2916 3010 -262 210 276 92 40 chr17 7001248 7001324 -82503229 + L2 LINE L2 2722 2801 -513 * 407 257 20 10 chr17 7001341 7001442 -82503111 + MER94 DNA DNA 19 120 -14 555 308 86 4 chr17 7001452 7001686 -82502867 + L2 LINE L2 2809 3061 -252 1032 285 98 21 chr17 7002156 7002535 -82502018 - MLT1K LTR MaLR -34 554 147 246 266 42 112 chr17 7002690 7002833 -82501720 + MIR SINE MIR 60 192 -70 317 287 144 35 chr17 7003789 7003963 -82500590 + MIR SINE MIR 18 210 -52 1875 141 7 0 chr17 7004173 7004470 -82500083 - AluSg SINE Alu 0 310 12 432 236 34 0 chr17 7004603 7004692 -82499861 + L1MC5 LINE L1 7810 7901 -60 211 379 15 0 chr17 7005053 7005119 -82499434 - MIR SINE MIR -108 100 34 467 216 28 102 chr17 7005251 7005427 -82499126 - MIR SINE MIR -1 261 99 300 264 55 11 chr17 7005530 7005621 -82498932 - L1ME LINE L1 -340 5781 5687 384 248 38 53 chr17 7005640 7005773 -82498780 + L2 LINE L2 3180 3310 -3 439 141 22 0 chr17 7005796 7005888 -82498665 + GA-rich Low_complexity Low_complexity 1 94 0 662 216 24 72 chr17 7006005 7006049 -82498504 - MER5B DNA MER1_type 0 178 133 2382 63 0 10 chr17 7006049 7006349 -82498204 - AluSg SINE Alu -13 297 1 662 216 24 72 chr17 7006349 7006471 -82498082 - MER5B DNA MER1_type -45 133 20 465 293 18 24 chr17 7006705 7006869 -82497684 + MER5A DNA MER1_type 26 188 -1 414 255 114 62 chr17 7007540 7007865 -82496688 - HAL1 LINE L1 -832 1675 1334 395 198 127 32 chr17 7007899 7008025 -82496528 - MIR SINE MIR -17 245 108 2108 124 0 7 chr17 7008762 7009068 -82495485 + AluSx SINE Alu 1 304 -8 1974 156 122 64 chr17 7009612 7010094 -82494459 + MLT2B1 LTR ERVL 3 512 -8 287 116 0 116 chr17 7010360 7010429 -82494124 + MLT1K LTR MaLR 182 242 -346 246 235 20 0 chr17 7010396 7010447 -82494106 + MLT1K LTR MaLR 141 192 -396 * 315 291 106 70 chr17 7011186 7011543 -82493010 + L2 LINE L2 2450 2819 -495 2402 69 0 0 chr17 7012579 7012882 -82491671 - AluY SINE Alu -8 303 1 193 294 0 0 chr17 7013398 7013449 -82491104 + L2 LINE L2 2487 2537 -777 2241 141 19 14 chr17 7013549 7013912 -82490641 - LTR45B LTR ERV1 -101 388 24 1824 147 7 3 chr17 7013912 7014205 -82490348 + AluSx SINE Alu 1 294 -18 889 237 163 50 chr17 7014247 7014419 -82490134 + L2 LINE L2 2536 2687 -626 2033 83 3 53 chr17 7014419 7014744 -82489809 + AluSp SINE Alu 1 310 0 889 237 163 50 chr17 7014744 7015169 -82489384 + L2 LINE L2 2687 3221 -92 316 260 10 0 chr17 7015241 7015341 -82489212 - L1MC4 LINE L1 -17 8025 7925 206 214 0 0 chr17 7015345 7015387 -82489166 + (TCCA)n Simple_repeat Simple_repeat 4 45 0 1926 141 3 10 chr17 7015410 7015722 -82488831 - AluSg SINE Alu 0 310 1 570 216 20 40 chr17 7015843 7016011 -82488542 - L1ME2 LINE L1 -5 6161 5997 463 259 0 28 chr17 7016012 7016120 -82488433 + L2 LINE L2 3209 3313 0 2138 121 0 0 chr17 7016565 7016863 -82487690 - AluSq SINE Alu -15 298 1 528 16 0 0 chr17 7017074 7017135 -82487418 + (CA)n Simple_repeat Simple_repeat 2 62 0 225 327 144 26 chr17 7017504 7017657 -82486896 - L2 LINE L2 -1 3271 3101 242 321 47 0 chr17 7018229 7018335 -82486218 + L2 LINE L2 2550 2660 -654 333 0 0 0 chr17 7019348 7019385 -82485168 + (TG)n Simple_repeat Simple_repeat 2 38 0 2011 119 20 0 chr17 7020617 7020910 -82483643 - AluSx SINE Alu -13 299 1 1958 139 0 3 chr17 7020932 7021235 -82483318 - AluSx SINE Alu 0 312 11 1993 126 0 0 chr17 7021250 7021543 -82483010 - AluSx SINE Alu -11 301 9 1886 125 21 4 chr17 7021544 7021825 -82482728 - AluSx SINE Alu -26 286 1 629 304 65 42 chr17 7021866 7022221 -82482332 + L2 LINE L2 2910 3272 0 2306 81 0 0 chr17 7022222 7022520 -82482033 + AluY SINE Alu 1 298 -13 796 163 0 0 chr17 7022953 7023076 -82481477 - AluJo SINE Alu -22 290 168 785 135 0 0 chr17 7023078 7023189 -82481364 - AluJo SINE Alu -200 112 2 413 327 72 33 chr17 7024744 7025050 -82479503 + L1ME4a LINE L1 3459 3776 -2370 518 154 0 11 chr17 7025189 7025280 -82479273 + MLT1C LTR MaLR 1 90 -377 2169 113 3 0 chr17 7025298 7025607 -82478946 - AluSx SINE Alu -2 310 1 236 315 27 0 chr17 7025710 7025783 -82478770 + MER58 DNA MER1_type 2346 2420 0 2089 50 0 12 chr17 7025887 7026146 -82478407 + L1PA8 LINE L1 5913 6168 -4 389 321 137 50 chr17 7026617 7027090 -82477463 + L1ME4a LINE L1 4726 5253 -893 292 301 83 68 chr17 7027091 7027228 -82477325 + L1ME4a LINE L1 5255 5388 -733 2039 118 16 3 chr17 7027228 7027534 -82477019 + AluSg SINE Alu 1 310 0 292 301 83 68 chr17 7027534 7027722 -82476831 + L1ME4a LINE L1 5388 5585 -536 317 294 80 39 chr17 7028363 7028876 -82475677 + L1ME4a LINE L1 5588 6121 0 1011 278 84 28 chr17 7029740 7030118 -82474435 + L1MEd LINE L1 9 364 -5765 2040 120 0 13 chr17 7030118 7030434 -82474119 + AluSx SINE Alu 1 312 0 1011 278 84 28 chr17 7030434 7030902 -82473651 + L1MEd LINE L1 364 804 -5325 2151 104 0 7 chr17 7030902 7031199 -82473354 + AluSp SINE Alu 1 295 -18 1011 278 84 28 chr17 7031199 7031840 -82472713 + L1MEd LINE L1 804 1652 -4477 229 347 89 8 chr17 7032608 7032732 -82471821 - MLT1K LTR MaLR -23 565 432 250 214 36 0 chr17 7032847 7032903 -82471650 + MER53 DNA DNA 132 189 0 267 235 49 25 chr17 7032916 7032997 -82471556 - MLT1K LTR MaLR -342 246 164 2102 76 11 4 chr17 7033086 7033349 -82471204 + AluSg SINE Alu 34 298 -12 776 185 93 6 chr17 7033626 7033788 -82470765 - MER5B DNA MER1_type -2 176 1 1472 127 162 4 chr17 7033935 7034188 -82470365 + AluSx SINE Alu 1 293 -19 2422 61 0 38 chr17 7034206 7034519 -82470034 + AluY SINE Alu 5 305 -6 304 201 71 32 chr17 7034580 7034734 -82469819 + L1ME4a LINE L1 5962 6121 0 518 290 51 19 chr17 7035758 7035972 -82468581 + MIR SINE MIR 25 245 -17 329 280 106 15 chr17 7037201 7037333 -82467220 + MIR3 SINE MIR 56 199 -9 1886 235 74 6 chr17 7037937 7038559 -82465994 + L1MEd LINE L1 2577 3240 -2889 655 165 0 31 chr17 7038560 7038687 -82465866 + MLT1A1 LTR MaLR 197 319 -46 3991 236 59 47 chr17 7038690 7039462 -82465091 + L1MEd LINE L1 3235 3996 -2151 2511 70 0 0 chr17 7039462 7039760 -82464793 + AluY SINE Alu 1 298 -13 3991 236 59 47 chr17 7039760 7040136 -82464417 + L1MEd LINE L1 3996 4366 -1781 1869 161 0 24 chr17 7040136 7040427 -82464126 - AluJb SINE Alu -14 298 15 3991 236 59 47 chr17 7040427 7041467 -82463086 + L1MEd LINE L1 4366 5449 -698 327 222 56 0 chr17 7041644 7041716 -82462837 - HERVL LTR ERVL -848 4806 4731 606 236 25 6 chr17 7041842 7041999 -82462554 + L1MB7 LINE L1 6007 6166 -18 2215 129 3 0 chr17 7042342 7042653 -82461900 + AluSx SINE Alu 1 312 0 1004 120 0 0 chr17 7042671 7042804 -82461749 + AluSg SINE Alu 1 133 -177 2138 138 3 3 chr17 7042804 7043115 -82461438 + AluSx SINE Alu 1 311 -1 403 213 13 20 chr17 7043115 7043265 -82461288 + GA-rich Low_complexity Low_complexity 2 150 0 391 220 96 53 chr17 7043830 7043992 -82460561 + L1M4 LINE L1 5069 5243 -903 3961 4 0 0 chr17 7043992 7044450 -82460103 + L1PA2 LINE L1 5698 6155 0 391 220 96 53 chr17 7044450 7044496 -82460057 + L1M4 LINE L1 5243 5286 -860 220 27 54 0 chr17 7044550 7044587 -82459966 + (TAAAA)n Simple_repeat Simple_repeat 3 41 0 543 194 173 0 chr17 7044600 7044793 -82459760 + L1ME1 LINE L1 5218 5440 -722 1363 112 0 0 chr17 7044793 7044963 -82459590 + AluSq SINE Alu 1 170 -143 773 273 62 32 chr17 7044964 7045305 -82459248 + L1ME1 LINE L1 5810 6160 -6 610 206 18 42 chr17 7045339 7045504 -82459049 - MLT1J1 LTR MaLR -285 161 1 219 309 41 24 chr17 7046376 7046499 -82458054 - MIR3 SINE MIR -48 160 36 2275 72 3 52 chr17 7046523 7046850 -82457703 + AluSq SINE Alu 2 313 0 2307 121 0 0 chr17 7047009 7047315 -82457238 + AluSx SINE Alu 1 306 -6 1155 157 0 5 chr17 7047830 7048027 -82456526 - MLT1D LTR MaLR 0 505 310 566 208 66 85 chr17 7048066 7048278 -82456275 - MLT1D LTR MaLR -295 210 3 1347 49 5 16 chr17 7048522 7048706 -82455847 - L1PA7 LINE L1 -1 6153 5972 255 297 93 0 chr17 7049456 7049574 -82454979 - MIR3 SINE MIR -46 162 34 267 54 0 0 chr17 7050604 7050641 -82453912 + (CAGGG)n Simple_repeat Simple_repeat 2 38 0 192 97 0 0 chr17 7051115 7051146 -82453407 + (CGGGGG)n Simple_repeat Simple_repeat 3 33 0 394 59 0 0 chr17 7051279 7051330 -82453223 - AluSp/q SINE Alu -27 276 226 2391 100 0 0 chr17 7052013 7052313 -82452240 + AluSg SINE Alu 1 300 -10 2381 98 3 9 chr17 7052382 7052697 -82451856 + AluSp SINE Alu 1 313 0 3765 66 14 50 chr17 7053090 7053417 -82451136 + L1PA8 LINE L1 5619 5918 -254 2427 108 0 0 chr17 7053417 7053723 -82450830 + AluSc SINE Alu 1 306 -3 3765 66 14 50 chr17 7053723 7053970 -82450583 + L1PA8 LINE L1 5918 6172 0 2279 54 0 0 chr17 7054622 7054882 -82449671 - AluSc SINE Alu -49 260 1 2205 109 13 16 chr17 7055654 7055958 -82448595 + AluSg SINE Alu 1 303 -7 195 280 120 13 chr17 7056779 7056854 -82447699 - MIR SINE MIR -1 261 179 362 127 0 0 chr17 7056854 7056909 -82447644 + MSTD LTR MaLR 1 55 -341 2441 83 0 3 chr17 7056927 7057227 -82447326 - AluSq SINE Alu -14 299 1 447 311 61 25 chr17 7057245 7057441 -82447112 + L1ME3 LINE L1 5766 5968 -202 1011 172 27 11 chr17 7057623 7057809 -82446744 - AluJo SINE Alu -4 308 120 1673 138 32 0 chr17 7057922 7058233 -82446320 - L1MA5A LINE L1 0 6297 5977 251 105 0 0 chr17 7058239 7058277 -82446276 + MLT1A2 LTR MaLR 75 112 -262 2831 204 35 24 chr17 7058741 7059372 -82445181 + LTR9B LTR ERV1 7 644 0 255 245 46 22 chr17 7059460 7059529 -82445024 + L1ME3 LINE L1 6025 6091 -79 990 175 5 63 chr17 7059529 7059701 -82444852 + MER6B DNA MER2_type 1 159 -706 2149 107 0 67 chr17 7059701 7060028 -82444525 - AluSq SINE Alu -8 305 1 990 175 5 63 chr17 7060028 7060078 -82444475 + MER6B DNA MER2_type 159 210 0 255 245 46 22 chr17 7060078 7060144 -82444409 + L1ME3 LINE L1 6091 6163 -7 312 91 0 0 chr17 7060545 7060589 -82443964 + (TCCCC)n Simple_repeat Simple_repeat 1 44 0 2118 117 7 26 chr17 7060589 7060898 -82443655 - AluSx SINE Alu -9 303 1 287 320 0 13 chr17 7060901 7060979 -82443574 - L3 LINE CR1 -1269 308 232 2404 74 0 10 chr17 7061548 7061847 -82442706 - AluSg SINE Alu -13 297 2 493 308 128 4 chr17 7063087 7063321 -82441232 - L2 LINE L2 -95 3177 2915 529 195 71 0 chr17 7063900 7064013 -82440540 + L2 LINE L2 3193 3313 0 191 219 0 24 chr17 7064884 7064925 -82439628 - MIR SINE MIR -88 120 81 305 345 34 14 chr17 7065043 7065191 -82439362 - L2 LINE L2 -529 2785 2635 2388 95 0 13 chr17 7065516 7065832 -82438721 - AluSx SINE Alu 0 312 1 2453 83 3 0 chr17 7066418 7066719 -82437834 + AluSx SINE Alu 1 302 -10 285 344 32 8 chr17 7067001 7067126 -82437427 - MIR SINE MIR -96 166 39 322 202 24 12 chr17 7067989 7068073 -82436480 + MIR SINE MIR 65 149 -59 197 253 101 25 chr17 7069144 7069223 -82435330 + MIR3 SINE MIR 102 186 -22 1112 207 45 5 chr17 7071256 7071478 -82433075 - AluJo SINE Alu -81 231 1 433 199 145 48 chr17 7071637 7071802 -82432751 + MER5A DNA MER1_type 4 186 -3 209 353 85 17 chr17 7071805 7072040 -82432513 + L2 LINE L2 2263 2513 -801 244 273 15 0 chr17 7072577 7072643 -82431910 + L2 LINE L2 3247 3313 0 237 65 0 0 chr17 7072655 7072686 -82431867 + (TGAA)n Simple_repeat Simple_repeat 2 32 0 181 173 115 0 chr17 7074717 7074769 -82429784 + L2 LINE L2 2332 2389 -925 207 100 0 0 chr17 7074783 7074813 -82429740 + (TTCA)n Simple_repeat Simple_repeat 2 31 0 256 347 32 0 chr17 7074814 7074909 -82429644 - L2 LINE L2 -13 3300 3203 427 317 76 15 chr17 7074973 7075235 -82429318 + L2 LINE L2 2481 2758 -556 211 321 93 68 chr17 7075589 7075826 -82428727 + L3 LINE CR1 1309 1551 -26 421 242 147 19 chr17 7076269 7076426 -82428127 - MIR SINE MIR -70 192 16 1021 258 141 42 chr17 7076722 7077276 -82427277 + L1MC4a LINE L1 5364 5972 -1836 329 241 68 53 chr17 7078289 7078422 -82426131 + LTR33 LTR ERVL 382 516 -5 353 261 31 68 chr17 7078769 7078930 -82425623 + L2 LINE L2 3156 3310 -3 1427 175 77 17 chr17 7080103 7080400 -82424153 - MER58B DNA MER1_type 0 341 27 235 266 64 73 chr17 7080431 7080540 -82424013 + MER5B DNA MER1_type 1 108 -70 * 562 157 50 92 chr17 7080444 7080621 -82423932 - MER5A DNA MER1_type -9 169 11 225 279 76 25 chr17 7080691 7080770 -82423783 + L2 LINE L2 3187 3269 -3 235 229 157 0 chr17 7080820 7080903 -82423650 + MIR SINE MIR 87 182 -80 204 337 0 11 chr17 7081641 7081733 -82422820 + L2 LINE L2 2597 2687 -627 * 474 214 0 103 chr17 7081721 7081866 -82422687 + MIR SINE MIR 79 208 -54 208 291 74 40 chr17 7082387 7082562 -82421991 - MER5A DNA MER1_type -5 184 4 516 170 0 0 chr17 7083084 7083190 -82421363 + GA-rich Low_complexity Low_complexity 4 109 0 219 380 65 0 chr17 7083198 7083290 -82421263 - MIR SINE MIR -81 127 30 2050 90 25 0 chr17 7084685 7085014 -82419539 - AluSp SINE Alu 0 336 1 184 319 28 28 chr17 7085076 7085148 -82419405 + L2 LINE L2 2427 2498 -816 327 254 40 63 chr17 7085163 7085289 -82419264 - L1MC5 LINE L1 -29 7932 7810 2654 173 16 42 chr17 7086147 7086514 -82418039 + L1MB8 LINE L1 5375 5723 -455 1450 106 55 0 chr17 7086514 7086552 -82418001 + AluSg/x SINE Alu 84 118 -194 206 32 32 0 chr17 7086552 7086583 -82417970 + (TAAAA)n Simple_repeat Simple_repeat 2 33 0 1450 106 55 0 chr17 7086583 7086761 -82417792 + AluSg/x SINE Alu 118 312 0 2654 173 16 42 chr17 7086761 7086964 -82417589 + L1MB8 LINE L1 5723 5930 -248 189 0 0 0 chr17 7087064 7087085 -82417468 + (TCCCC)n Simple_repeat Simple_repeat 5 25 0 703 176 137 0 chr17 7087349 7087480 -82417073 + AluSx SINE Alu 42 190 -122 383 317 128 32 chr17 7087528 7087998 -82416555 + L2 LINE L2 2350 2864 -450 231 323 40 32 chr17 7088153 7088277 -82416276 + L2 LINE L2 2677 2801 -513 203 248 0 88 chr17 7090268 7090393 -82414160 + L2 LINE L2 2932 3045 -227 299 367 10 10 chr17 7091143 7091342 -82413211 + L2 LINE L2 2892 3090 -182 2320 89 0 0 chr17 7091796 7092099 -82412454 + AluSx SINE Alu 1 303 -9 794 257 23 0 chr17 7092906 7093081 -82411472 - MER58A DNA MER1_type -1 223 45 2315 106 0 0 chr17 7093908 7094220 -82410333 - AluSx SINE Alu 0 312 1 239 277 62 39 chr17 7095103 7095233 -82409320 - L2 LINE L2 -219 3053 2921 312 264 20 81 chr17 7095742 7095890 -82408663 + L3b LINE CR1 1290 1428 -155 269 219 106 41 chr17 7096071 7096194 -82408359 + MER5A DNA MER1_type 29 159 -30 636 294 108 5 chr17 7097402 7097606 -82406947 - MIR SINE MIR -22 240 16 2623 172 90 65 chr17 7097747 7098378 -82406175 + MER21B LTR ERV1 267 861 -2 2281 91 0 0 chr17 7098477 7098773 -82405780 - AluY SINE Alu -15 296 1 270 160 0 0 chr17 7099346 7099396 -82405157 + (CA)n Simple_repeat Simple_repeat 2 51 0 273 286 135 0 chr17 7099541 7099674 -82404879 - MIR3 SINE MIR -16 192 42 2053 192 32 68 chr17 7100215 7100681 -82403872 + MLT2B1 LTR ERVL 1 447 -73 2339 78 10 0 chr17 7100681 7100987 -82403566 - AluSp SINE Alu -4 309 1 2053 192 32 68 chr17 7100987 7101051 -82403502 + MLT2B1 LTR ERVL 447 512 -8 1162 195 32 18 chr17 7101329 7101550 -82403003 + MER58A DNA MER1_type 1 224 0 246 32 0 0 chr17 7103066 7103097 -82401456 + (TC)n Simple_repeat Simple_repeat 2 32 0 * 398 20 20 0 chr17 7103096 7103147 -82401406 + (TA)n Simple_repeat Simple_repeat 1 52 0 2275 111 0 0 chr17 7103506 7103812 -82400741 - AluSg SINE Alu -4 306 1 339 191 236 0 chr17 7104009 7104098 -82400455 + LTR16A1 LTR ERVL 7 116 -341 * 1061 146 18 0 chr17 7104097 7104268 -82400285 + MER58A DNA MER1_type 42 215 -9 752 309 52 4 chr17 7104313 7104582 -82399971 + LTR16A1 LTR ERVL 170 451 -6 2138 123 3 0 chr17 7104915 7105224 -82399329 - AluY SINE Alu -1 310 1 367 304 200 24 chr17 7105303 7105553 -82399000 - L2 LINE L2 0 3272 2979 217 344 64 57 chr17 7106024 7106306 -82398247 - L2 LINE L2 -569 2745 2462 262 268 57 32 chr17 7106333 7106456 -82398097 + MIR3 SINE MIR 72 197 -11 541 295 84 0 chr17 7106465 7106655 -82397898 - MIR SINE MIR -41 221 16 432 318 89 11 chr17 7106962 7107141 -82397412 - MLT1J2 LTR MaLR 0 450 258 2365 77 0 0 chr17 7107156 7107454 -82397099 - AluY SINE Alu -11 300 3 1869 141 3 10 chr17 7107456 7107762 -82396791 - AluSq SINE Alu -9 304 1 979 127 18 6 chr17 7107764 7107929 -82396624 - MER58A DNA MER1_type -8 216 50 359 253 11 23 chr17 7107936 7108023 -82396530 - MER58A DNA MER1_type -12 95 10 255 263 95 80 chr17 7108238 7108375 -82396178 - L2 LINE L2 0 3272 3134 1120 186 4 72 chr17 7108481 7108744 -82395809 + AluJo SINE Alu 55 299 -13 265 286 39 0 chr17 7108766 7108843 -82395710 + L2 LINE L2 3162 3241 -31 180 0 0 0 chr17 7108858 7108878 -82395675 + (TGAA)n Simple_repeat Simple_repeat 1 20 0 2162 88 3 33 chr17 7109141 7109446 -82395107 - AluSx SINE Alu -16 296 1 313 329 18 44 chr17 7109505 7109683 -82394870 - MIR3 SINE MIR -54 154 15 2360 64 0 0 chr17 7109758 7110055 -82394498 - AluY SINE Alu -14 297 1 504 68 0 0 chr17 7110076 7110150 -82394403 - Alu SINE Alu 0 310 237 284 270 99 18 chr17 7110328 7110439 -82394114 + MIR3 SINE MIR 87 206 -2 243 351 9 0 chr17 7111372 7111483 -82393070 - L3 LINE CR1 -36 1541 1430 561 329 50 22 chr17 7111703 7111925 -82392628 - MIR SINE MIR -26 236 9 286 308 55 0 chr17 7112410 7112501 -82392052 - L2 LINE L2 -43 3229 3134 790 311 88 26 chr17 7112665 7112787 -82391766 - LTR33 LTR ERVL -3 518 405 4260 34 4 0 chr17 7112787 7113284 -82391269 + L1PA4 LINE L1 5657 6155 0 790 311 88 26 chr17 7113284 7113615 -82390938 - LTR33 LTR ERVL -116 405 37 3106 293 112 38 chr17 7113662 7114604 -82389949 + HAL1 LINE L1 26 897 -1610 2286 97 0 0 chr17 7114604 7114904 -82389649 + AluSx SINE Alu 1 300 -12 3106 293 112 38 chr17 7114904 7115225 -82389328 + HAL1 LINE L1 897 1193 -1314 2733 106 3 5 chr17 7115225 7115601 -82388952 - THE1C LTR MaLR 0 375 1 3106 293 112 38 chr17 7115601 7115702 -82388851 + HAL1 LINE L1 1193 1285 -1222 2693 154 12 51 chr17 7115702 7116120 -82388433 + MLT1C LTR MaLR 1 399 -68 1748 119 47 72 chr17 7116120 7116439 -82388114 - AluJo SINE Alu -1 311 1 2693 154 12 51 chr17 7116439 7116506 -82388047 + MLT1C LTR MaLR 399 467 0 3106 293 112 38 chr17 7116506 7117024 -82387529 + HAL1 LINE L1 1285 2050 -457 1049 282 102 15 chr17 7117024 7117425 -82387128 - L2 LINE L2 -26 3287 2852 1385 283 54 30 chr17 7117439 7117851 -82386702 - L2 LINE L2 -579 2735 2305 2432 204 24 72 chr17 7117851 7118433 -82386120 + MLT2B3 LTR ERVL 1 554 0 1385 283 54 30 chr17 7118433 7118558 -82385995 - L2 LINE L2 -1009 2305 2185 442 294 23 60 chr17 7118572 7118837 -82385716 + HAL1 LINE L1 2055 2309 -198 2538 133 72 8 chr17 7119188 7119588 -82384965 - MSTA LTR MaLR -2 426 1 405 70 0 0 chr17 7120504 7120561 -82383992 + (TC)n Simple_repeat Simple_repeat 2 58 0 1102 196 18 13 chr17 7120571 7120795 -82383758 - AluJo SINE Alu -14 298 74 806 49 0 0 chr17 7120902 7121004 -82383549 - L1P3 LINE L1 -357 5797 5696 213 342 13 0 chr17 7121084 7121160 -82383393 + MIR3 SINE MIR 101 177 -31 351 142 0 57 chr17 7121249 7121326 -82383227 + MIR SINE MIR 103 172 -90 237 317 39 19 chr17 7121751 7121855 -82382698 + L2 LINE L2 3145 3250 -22 1964 95 29 0 chr17 7121909 7122234 -82382319 + AluSg SINE Alu 1 333 0 230 273 15 0 chr17 7122482 7122548 -82382005 + MIR SINE MIR 65 131 -77 871 73 0 0 chr17 7123327 7123436 -82381117 + AluSq/x SINE Alu 25 133 -179 2009 127 0 10 chr17 7123444 7123743 -82380810 + AluSx SINE Alu 1 296 -16 529 307 111 11 chr17 7123750 7124020 -82380533 - MLT1J2 LTR MaLR -144 306 10 1638 65 9 13 chr17 7125000 7125230 -82379323 + AluSc SINE Alu 1 229 -80 2030 90 0 4 chr17 7125330 7125609 -82378944 - AluSx SINE Alu -34 278 1 2468 289 67 22 chr17 7126433 7127760 -82376793 - L1MEc LINE L1 -4410 1986 600 373 266 276 16 chr17 7127847 7128038 -82376515 - MLT1H1 LTR MaLR -189 366 126 1301 212 146 35 chr17 7128038 7128435 -82376118 + MLT2B1 LTR ERVL 1 441 -79 258 32 0 0 chr17 7128441 7128472 -82376081 + (CA)n Simple_repeat Simple_repeat 2 32 0 219 69 0 0 chr17 7128477 7128506 -82376047 + (TATG)n Simple_repeat Simple_repeat 3 31 0 29 0 0 62 chr17 7128509 7128557 -82375996 + AT_rich Low_complexity Low_complexity 1 45 0 365 197 0 0 chr17 7128573 7128639 -82375914 - Tigger5 DNA MER2_type 0 2323 2258 267 219 141 0 chr17 7128694 7128758 -82375795 - Tigger5 DNA MER2_type 0 2323 2251 246 116 0 0 chr17 7128769 7128812 -82375741 + (TG)n Simple_repeat Simple_repeat 2 44 0 378 0 0 0 chr17 7128913 7128955 -82375598 + (TG)n Simple_repeat Simple_repeat 2 43 0 294 77 0 0 chr17 7128961 7129000 -82375553 + MLT2D LTR ERVL 376 414 0 * 399 240 117 13 chr17 7129000 7129138 -82375415 - MLT1H LTR MaLR -421 174 1 1165 152 165 9 chr17 7129144 7129453 -82375100 + MSTA LTR MaLR 1 406 -26 1991 108 3 3 chr17 7129462 7129748 -82374805 - AluSg SINE Alu -1 309 24 277 139 0 0 chr17 7129755 7129798 -82374755 + MSTA LTR MaLR 386 428 0 1410 257 99 4 chr17 7129800 7130306 -82374247 - MER20B DNA MER1_type -61 722 169 324 331 13 53 chr17 7131847 7131998 -82372555 + L2 LINE L2 2607 2751 -563 228 167 0 91 chr17 7132094 7132160 -82372393 + MIR SINE MIR 132 191 -71 555 85 0 0 chr17 7132205 7132287 -82372266 + (CAT)n Simple_repeat Simple_repeat 1 82 0 537 110 30 0 chr17 7133165 7133265 -82371288 + (TCTA)n Simple_repeat Simple_repeat 2 104 0 268 306 153 8 chr17 7133265 7133389 -82371164 - L2 LINE L2 -4 3309 3168 197 341 57 16 chr17 7134009 7134132 -82370421 - MIR3 SINE MIR -78 130 3 827 200 107 19 chr17 7134225 7134430 -82370123 + MIR SINE MIR 16 238 -24 2205 130 0 13 chr17 7134948 7135256 -82369297 + AluSx SINE Alu 2 305 -7 356 206 66 110 chr17 7135610 7135746 -82368807 + MER91B DNA MER1_type 1 130 -60 342 218 0 12 chr17 7135761 7135842 -82368711 + MER91B DNA MER1_type 90 175 -21 193 148 0 148 chr17 7136886 7136947 -82367606 - MIR SINE MIR -56 206 155 379 211 11 0 chr17 7136954 7137044 -82367509 - MER69A DNA AcHobo -23 154 64 262 141 0 141 chr17 7137064 7137128 -82367425 - MIR SINE MIR -105 157 103 358 257 81 95 chr17 7137706 7137916 -82366637 - HAL1 LINE L1 -1 2506 2300 472 202 0 21 chr17 7138088 7138182 -82366371 - MER66A LTR ERV1 0 478 387 2481 89 0 6 chr17 7138202 7138515 -82366038 + AluSq SINE Alu 1 311 -2 1546 182 42 7 chr17 7138590 7138898 -82365655 - MER66B LTR ERV1 -141 345 27 2319 86 3 26 chr17 7139511 7139824 -82364729 - AluSx SINE Alu -6 306 1 298 211 88 70 chr17 7141015 7141129 -82363424 - MIR3 SINE MIR -6 202 87 626 0 14 0 chr17 7141160 7141234 -82363319 + (TTTTC)n Simple_repeat Simple_repeat 5 79 0 1874 181 65 65 chr17 7141601 7142028 -82362525 - MLT1D LTR MaLR -5 500 71 2408 94 0 0 chr17 7142028 7142327 -82362226 + AluSx SINE Alu 2 300 -12 1874 181 65 65 chr17 7142327 7142392 -82362161 - MLT1D LTR MaLR -433 72 8 418 248 10 10 chr17 7143294 7143395 -82361158 + L2 LINE L2 3209 3309 -4 194 304 18 0 chr17 7143436 7143492 -82361061 - MIR3 SINE MIR -31 177 121 1196 239 64 0 chr17 7143495 7143792 -82360761 + MER90 LTR ERV1 297 612 -2 310 363 73 0 chr17 7144019 7144223 -82360330 - L2 LINE L2 -522 2792 2574 2398 104 0 0 chr17 7144835 7145142 -82359411 - AluSq SINE Alu -6 307 1 1260 239 144 17 chr17 7145257 7145667 -82358886 - MLT1C LTR MaLR -5 462 1 203 357 123 7 chr17 7146802 7146956 -82357597 - L2 LINE L2 -544 2770 2599 579 193 36 94 chr17 7147036 7147228 -82357325 + MER91B DNA MER1_type 4 184 -6 558 254 75 10 chr17 7147760 7147961 -82356592 + LTR33 LTR ERVL 1 214 -307 238 290 122 36 chr17 7149058 7149337 -82355216 - L2 LINE L2 -653 2661 2359 409 306 31 83 chr17 7150090 7150204 -82354349 - MIR SINE MIR 0 262 164 2083 122 7 3 chr17 7150204 7150535 -82354018 - AluSx SINE Alu 0 312 2 409 306 31 83 chr17 7150535 7150649 -82353904 - MIR SINE MIR -98 164 46 2293 119 0 0 chr17 7151186 7151481 -82353072 - AluSx SINE Alu -17 295 1 1395 229 44 11 chr17 7151772 7152135 -82352418 + MER74B LTR ERVL 56 430 -192 336 239 11 34 chr17 7152303 7152391 -82352162 + MER74B LTR ERVL 447 532 -90 2023 135 0 20 chr17 7152677 7152980 -82351573 + AluSx SINE Alu 5 301 -11 874 245 5 33 chr17 7155234 7155398 -82349155 + MIR SINE MIR 45 212 -50 2346 99 3 7 chr17 7155398 7155701 -82348852 + AluSx SINE Alu 1 302 -10 186 43 0 0 chr17 7155701 7155724 -82348829 + (TA)n Simple_repeat Simple_repeat 2 24 0 874 245 5 33 chr17 7155724 7155770 -82348783 + MIR SINE MIR 210 250 -12 203 218 141 39 chr17 7156226 7156304 -82348249 - L2 LINE L2 -3 3310 3225 239 222 0 0 chr17 7156590 7156635 -82347918 - MIR SINE MIR -68 140 96 2247 278 75 56 chr17 7156681 7156866 -82347687 - MER45C DNA AcHobo -628 953 773 2441 100 0 0 chr17 7156866 7157175 -82347378 - AluSc SINE Alu 0 309 1 2247 278 75 56 chr17 7157175 7157807 -82346746 - MER45C DNA AcHobo -808 773 115 2406 98 0 0 chr17 7157807 7158112 -82346441 + AluSx SINE Alu 1 305 -7 2247 278 75 56 chr17 7158112 7158190 -82346363 - MER45C DNA AcHobo -1466 115 40 271 167 114 68 chr17 7158453 7158585 -82345968 + (CTGGGG)n Simple_repeat Simple_repeat 4 141 0 311 296 11 0 chr17 7160586 7160674 -82343879 - L1M4 LINE L1 -2265 3881 3793 196 321 12 37 chr17 7161058 7161139 -82343414 + L2 LINE L2 3194 3272 0 734 213 100 0 chr17 7161991 7162151 -82342402 - MER45A DNA AcHobo 0 178 3 1516 107 158 12 chr17 7162201 7162454 -82342099 + AluSg SINE Alu 1 290 -10 840 172 38 59 chr17 7162967 7163153 -82341400 - MER5A DNA MER1_type -1 188 7 6519 181 52 17 chr17 7163448 7165613 -82338940 + L1MB7 LINE L1 3793 6047 -137 2374 104 0 13 chr17 7165613 7165929 -82338624 + AluSx SINE Alu 1 312 0 6519 181 52 17 chr17 7165929 7166052 -82338501 + L1MB7 LINE L1 6047 6164 -20 183 42 0 0 chr17 7166371 7166395 -82338158 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1169 170 43 0 chr17 7166399 7166587 -82337966 + AluJo SINE Alu 1 196 -116 2544 65 0 3 chr17 7166782 7167092 -82337461 + AluY SINE Alu 1 309 -2 961 131 0 14 chr17 7167248 7167393 -82337160 + FLAM_C SINE Alu 1 143 0 366 354 65 10 chr17 7167404 7167712 -82336841 + HAL1 LINE L1 1442 1766 -741 1876 179 3 3 chr17 7168052 7168360 -82336193 - AluJo SINE Alu -4 308 1 380 301 118 71 chr17 7168499 7168821 -82335732 + L1M4 LINE L1 2648 2984 -3162 305 197 14 0 chr17 7168821 7168892 -82335661 - MER69 DNA AcHobo 0 2526 2455 637 287 78 41 chr17 7169014 7169258 -82335295 + L1M4 LINE L1 3026 3278 -2868 2855 32 0 0 chr17 7169556 7169871 -82334682 + AluYb8 SINE Alu 1 315 -3 1315 73 6 0 chr17 7169871 7170035 -82334518 + AluY SINE Alu 133 297 -14 2016 108 0 0 chr17 7170048 7170299 -82334254 + AluSq SINE Alu 1 251 -62 2581 157 8 26 chr17 7170399 7170844 -82333709 + L1MB3 LINE L1 5695 6132 -51 2389 98 0 0 chr17 7170844 7171140 -82333413 + AluSx SINE Alu 1 296 -16 2581 157 8 26 chr17 7171140 7171190 -82333363 + L1MB3 LINE L1 6132 6181 -2 266 209 22 33 chr17 7171196 7171287 -82333266 + (TAA)n Simple_repeat Simple_repeat 3 92 0 24 0 0 0 chr17 7171327 7171351 -82333202 + AT_rich Low_complexity Low_complexity 1 24 0 232 329 76 55 chr17 7171603 7171986 -82332567 + L1MEd LINE L1 330 720 -5399 252 0 0 0 chr17 7172001 7172029 -82332524 + (CA)n Simple_repeat Simple_repeat 1 28 0 288 303 52 32 chr17 7172141 7172296 -82332257 - L2 LINE L2 -932 2382 2225 192 364 65 48 chr17 7172459 7172690 -82331863 + L2 LINE L2 3035 3269 -3 488 276 98 6 chr17 7172974 7173137 -82331416 - MIR SINE MIR -52 210 33 292 318 55 0 chr17 7173649 7173759 -82330794 + MIR SINE MIR 30 145 -63 197 220 40 90 chr17 7174122 7174222 -82330331 + MIR SINE MIR 45 139 -69 394 257 140 0 chr17 7175506 7175642 -82328911 + MIR SINE MIR 65 219 -43 739 226 94 28 chr17 7176697 7176909 -82327644 - MIR SINE MIR -9 253 28 401 281 166 5 chr17 7177287 7177486 -82327067 + MIR SINE MIR 13 243 -19 353 298 6 0 chr17 7178477 7178638 -82325915 + (TG)n Simple_repeat Simple_repeat 1 162 0 256 253 0 53 chr17 7178639 7178734 -82325819 + CT-rich Low_complexity Low_complexity 4 93 0 231 36 0 0 chr17 7178841 7178869 -82325684 + (CA)n Simple_repeat Simple_repeat 2 29 0 2208 112 3 3 chr17 7179351 7179646 -82324907 + AluSg SINE Alu 1 295 -15 326 266 52 32 chr17 7180076 7180225 -82324328 - MIR3 SINE MIR -52 156 33 405 241 58 89 chr17 7181797 7181863 -82322690 + L2 LINE L2 2848 2915 -398 2246 108 0 10 chr17 7181863 7182159 -82322394 + AluSq SINE Alu 5 297 -16 405 241 58 89 chr17 7182159 7182316 -82322237 + L2 LINE L2 2915 3064 -249 2689 239 61 28 chr17 7182366 7182607 -82321946 - L1ME1 LINE L1 -6 6160 5920 802 277 67 65 chr17 7182607 7183001 -82321552 - L1PB3 LINE L1 -229 5925 5533 2197 117 3 0 chr17 7183001 7183300 -82321253 - AluSp SINE Alu -13 300 1 802 277 67 65 chr17 7183300 7183488 -82321065 - L1PB3 LINE L1 -621 5533 5333 2067 124 24 7 chr17 7183488 7183786 -82320767 - AluSg SINE Alu -7 303 1 802 277 67 65 chr17 7183786 7183838 -82320715 - L1PB3 LINE L1 -821 5333 5283 259 288 55 52 chr17 7183841 7183976 -82320577 + L2 LINE L2 3138 3313 0 311 271 124 39 chr17 7183980 7184109 -82320444 + MIR3 SINE MIR 49 188 -20 229 281 27 96 chr17 7184568 7184714 -82319839 + MIR3 SINE MIR 19 154 -54 189 0 0 0 chr17 7185345 7185366 -82319187 + (GGCTG)n Simple_repeat Simple_repeat 5 25 0 1063 75 0 0 chr17 7185675 7185808 -82318745 + AluSq/x SINE Alu 1 133 -180 2075 135 0 19 chr17 7185814 7186132 -82318421 + AluSx SINE Alu 1 312 0 339 247 21 11 chr17 7186672 7186765 -82317788 - MIR SINE MIR -74 134 41 1879 65 47 127 chr17 7187285 7187624 -82316929 - AluSx SINE Alu 0 312 1 376 326 22 14 chr17 7187701 7187839 -82316714 + L2 LINE L2 3119 3257 -15 486 255 131 38 chr17 7188412 7188679 -82315874 - MLT1I LTR MaLR -1 408 117 203 286 29 14 chr17 7188743 7188813 -82315740 + MIR3 SINE MIR 118 188 -20 921 191 105 49 chr17 7189382 7189706 -82314847 + L1M4 LINE L1 4125 4466 -1680 208 328 50 42 chr17 7190255 7190374 -82314179 - L2 LINE L2 -43 3229 3110 2356 84 0 0 chr17 7190699 7190997 -82313556 - AluSq SINE Alu -15 298 1 294 29 0 0 chr17 7191325 7191360 -82313193 + (TG)n Simple_repeat Simple_repeat 1 35 0 319 278 68 25 chr17 7191410 7191572 -82312981 - L2 LINE L2 -338 2975 2807 215 359 0 0 chr17 7191563 7191627 -82312926 + L3 LINE CR1 1505 1568 -9 * 319 338 26 7 chr17 7191899 7192050 -82312503 - MIR SINE MIR -3 259 106 486 294 114 5 chr17 7192536 7192747 -82311806 + MIR SINE MIR 3 236 -26 919 127 0 22 chr17 7192930 7193064 -82311489 - FLAM_C SINE Alu 0 133 3 201 121 0 0 chr17 7193389 7193422 -82311131 + (CAGA)n Simple_repeat Simple_repeat 3 35 0 1718 165 0 28 chr17 7194283 7194604 -82309949 + AluJo SINE Alu 1 312 0 270 0 0 0 chr17 7194666 7194696 -82309857 + (TC)n Simple_repeat Simple_repeat 1 30 0 * 309 89 0 0 chr17 7194695 7194740 -82309813 + (CA)n Simple_repeat Simple_repeat 1 45 0 309 89 0 0 chr17 7194888 7194933 -82309620 + (CA)n Simple_repeat Simple_repeat 1 45 0 605 280 60 10 chr17 7195112 7195312 -82309241 + MIR SINE MIR 39 248 -14 366 326 72 54 chr17 7195567 7195972 -82308581 + L2 LINE L2 2834 3245 -27 2127 98 0 7 chr17 7196771 7197066 -82307487 + AluSx SINE Alu 9 301 -11 241 319 8 24 chr17 7197123 7197236 -82307317 - MIR SINE MIR -68 140 76 258 32 0 0 chr17 7197761 7197792 -82306761 + (TTTTC)n Simple_repeat Simple_repeat 2 32 0 2124 70 29 0 chr17 7197794 7198067 -82306486 - AluSp SINE Alu -32 281 1 344 181 134 79 chr17 7200080 7200207 -82304346 - MIR3 SINE MIR -17 191 58 415 279 16 16 chr17 7200264 7200393 -82304160 + MIR SINE MIR 49 177 -85 2335 66 0 16 chr17 7201115 7201418 -82303135 + AluY SINE Alu 1 298 -13 728 202 0 16 chr17 7201634 7201763 -82302790 + FLAM_C SINE Alu 3 129 -4 27 0 0 0 chr17 7201764 7201791 -82302762 + AT_rich Low_complexity Low_complexity 1 27 0 207 259 59 37 chr17 7201986 7202121 -82302432 + MIR3 SINE MIR 61 198 -10 2360 82 0 13 chr17 7202793 7203108 -82301445 - AluY SINE Alu 0 311 1 258 204 19 0 chr17 7203527 7203581 -82300972 + MER91B DNA MER1_type 8 62 -128 267 305 42 0 chr17 7203883 7203978 -82300575 + MIR3 SINE MIR 110 208 0 2083 132 3 3 chr17 7204075 7204386 -82300167 + AluSx SINE Alu 1 311 -1 273 321 107 15 chr17 7204729 7204950 -82299603 + MIR SINE MIR 1 252 -10 183 42 0 0 chr17 7205008 7205032 -82299521 + (CA)n Simple_repeat Simple_repeat 1 24 0 252 200 14 71 chr17 7205688 7205758 -82298795 + L2 LINE L2 3206 3271 -1 23 54 0 0 chr17 7206383 7206420 -82298133 + GC_rich Low_complexity Low_complexity 1 37 0 180 125 36 18 chr17 7206549 7206605 -82297948 + (CCG)n Simple_repeat Simple_repeat 3 59 0 33 56 0 0 chr17 7206624 7206678 -82297875 + GC_rich Low_complexity Low_complexity 1 54 0 226 217 33 22 chr17 7206697 7206789 -82297764 + (CCCCG)n Simple_repeat Simple_repeat 4 96 0 454 275 26 96 chr17 7207695 7207924 -82296629 - L3 LINE CR1 -72 1505 1293 218 180 16 0 chr17 7208624 7208685 -82295868 + (TG)n Simple_repeat Simple_repeat 1 62 0 452 393 32 8 chr17 7209607 7209854 -82294699 + L3 LINE CR1 275 527 -1050 186 256 0 0 chr17 7210009 7210052 -82294501 + L3 LINE CR1 751 793 -784 253 246 15 0 chr17 7210052 7210117 -82294436 + L3 LINE CR1 752 817 -760 1058 110 6 0 chr17 7210543 7210716 -82293837 + (TCC)n Simple_repeat Simple_repeat 2 175 0 937 140 17 3 chr17 7210749 7211103 -82293450 + CT-rich Low_complexity Low_complexity 1 359 0 2042 107 43 0 chr17 7211674 7211973 -82292580 - AluSx SINE Alu 0 312 1 507 345 45 27 chr17 7212080 7212416 -82292137 - L1MC4a LINE L1 -1911 5897 5556 1947 111 6 52 chr17 7212503 7212828 -82291725 + AluSq SINE Alu 1 310 -3 2140 94 44 0 chr17 7212976 7213273 -82291280 + AluSx SINE Alu 1 310 -2 2288 85 3 0 chr17 7213626 7213933 -82290620 + AluSg SINE Alu 1 308 -2 2453 67 0 3 chr17 7214140 7214452 -82290101 + AluY SINE Alu 1 311 0 751 244 15 79 chr17 7214474 7214740 -82289813 - MIR SINE MIR 0 262 14 249 285 66 53 chr17 7215758 7215909 -82288644 - MIR3 SINE MIR -54 154 2 248 308 28 9 chr17 7216102 7216209 -82288344 - LTR67 LTR ERVL -21 536 428 1965 138 13 0 chr17 7216219 7216341 -82288212 + AluSx SINE Alu 1 120 -192 189 0 0 0 chr17 7216341 7216362 -82288191 + (TAAAA)n Simple_repeat Simple_repeat 2 22 0 1965 138 13 0 chr17 7216362 7216537 -82288016 + AluSx SINE Alu 120 302 -10 344 274 120 8 chr17 7217487 7217604 -82286949 + MIR SINE MIR 19 148 -60 2382 71 0 0 chr17 7217697 7218007 -82286546 - AluSg SINE Alu 0 310 1 2383 96 0 0 chr17 7219525 7219837 -82284716 - AluSx SINE Alu 0 312 1 1086 279 56 37 chr17 7219926 7220303 -82284250 + MLT1K LTR MaLR 1 384 -204 265 310 95 0 chr17 7220695 7220811 -82283742 + MIR SINE MIR 92 218 -44 1120 96 30 0 chr17 7220977 7221170 -82283383 + AluSg/x SINE Alu 140 337 0 195 320 0 39 chr17 7221182 7221260 -82283293 + L2 LINE L2 3188 3262 -10 473 295 42 12 chr17 7221350 7221516 -82283037 + MIR SINE MIR 1 171 -91 553 223 47 27 chr17 7221820 7221968 -82282585 - MIR SINE MIR -2 260 110 201 220 9 119 chr17 7224602 7224711 -82279842 - L2 LINE L2 -1 3312 3216 674 239 55 0 chr17 7225306 7225469 -82279084 + MIR SINE MIR 91 262 0 2152 97 0 13 chr17 7227194 7227502 -82277051 + AluSx SINE Alu 1 304 -8 2449 50 0 7 chr17 7227656 7227955 -82276598 - AluY SINE Alu -14 297 1 288 0 0 0 chr17 7228239 7228271 -82276282 + (CA)n Simple_repeat Simple_repeat 2 33 0 4607 188 173 39 chr17 7228314 7229879 -82274674 - L1MC4 LINE L1 -216 7826 6024 992 300 144 29 chr17 7229873 7231189 -82273364 - L1MEc LINE L1 -4074 2236 770 * 251 345 0 0 chr17 7231256 7231343 -82273210 - L1MEc LINE L1 -5472 647 561 1979 241 86 93 chr17 7231764 7232188 -82272365 - HAL1 LINE L1 -461 2046 1621 1465 153 42 0 chr17 7232188 7232429 -82272124 - AluJo SINE Alu -59 253 3 1979 241 86 93 chr17 7232429 7233242 -82271311 - HAL1 LINE L1 -886 1621 817 552 272 97 53 chr17 7233240 7233279 -82271274 - HAL1 LINE L1 -2150 357 321 * 2379 150 67 12 chr17 7233279 7233685 -82270868 + MSTA LTR MaLR 1 428 0 552 272 97 53 chr17 7233685 7233987 -82270566 - HAL1 LINE L1 -2186 321 1 2127 118 10 0 chr17 7234303 7234613 -82269940 + AluSx SINE Alu 12 302 -10 679 316 51 40 chr17 7235079 7235548 -82269005 + HAL1 LINE L1 1 474 -2033 1031 267 119 38 chr17 7235549 7236070 -82268483 + HAL1 LINE L1 1585 2147 -360 1929 176 38 27 chr17 7236431 7236800 -82267753 + MLT1A2 LTR MaLR 1 373 -1 881 0 0 52 chr17 7238313 7238449 -82266104 + (GAA)n Simple_repeat Simple_repeat 1 129 0 194 315 61 88 chr17 7239186 7239516 -82265037 - L2 LINE L2 -26 3246 2926 906 253 36 44 chr17 7239897 7240261 -82264292 + L1ME2 LINE L1 4886 5246 -900 541 143 151 0 chr17 7240300 7240426 -82264127 + L1MB7 LINE L1 6040 6184 0 604 220 60 0 chr17 7240442 7240592 -82263961 + L1ME2 LINE L1 5232 5390 -756 349 227 77 56 chr17 7240593 7240945 -82263608 + AluSx SINE Alu 1 182 -120 1762 160 14 3 chr17 7240945 7241239 -82263314 + AluSx SINE Alu 1 297 -15 615 250 152 23 chr17 7241256 7241512 -82263041 + L1ME2 LINE L1 5440 5728 -2267 710 198 62 51 chr17 7241513 7241690 -82262863 + MLT1D LTR MaLR 305 483 -22 1041 190 144 9 chr17 7241743 7242035 -82262518 + L1ME2 LINE L1 5835 6164 0 344 266 53 39 chr17 7242073 7242280 -82262273 + L1MC4 LINE L1 7832 8041 -1 451 176 7 3 chr17 7242597 7242754 -82261799 + MER3 DNA MER1_type 1 203 -6 466 233 30 30 chr17 7242920 7243053 -82261500 + MIR3 SINE MIR 30 162 -46 243 266 76 38 chr17 7243327 7243406 -82261147 - MIR SINE MIR -147 115 34 223 170 0 21 chr17 7243688 7243735 -82260818 + (GGGTG)n Simple_repeat Simple_repeat 4 49 0 548 286 66 31 chr17 7244341 7244537 -82260016 + MIR SINE MIR 48 250 -12 263 256 0 12 chr17 7244571 7244657 -82259896 + L1P5 LINE L1 5346 5430 -721 289 286 29 0 chr17 7244754 7244859 -82259694 + L1MC4a LINE L1 5796 5903 -1905 368 273 11 0 chr17 7246886 7246974 -82257579 + MIR3 SINE MIR 79 167 -41 452 211 32 0 chr17 7247953 7248048 -82256505 - MER5A DNA MER1_type -80 109 12 421 220 214 29 chr17 7248125 7248298 -82256255 + HAL1 LINE L1 7 211 -2296 763 44 0 0 chr17 7248300 7248390 -82256163 - 5S rRNA rRNA -31 90 1 1214 268 82 31 chr17 7248390 7248901 -82255652 + HAL1 LINE L1 202 738 -1769 3306 216 65 22 chr17 7248908 7250142 -82254411 + L1ME2 LINE L1 4902 6333 -1 306 290 21 11 chr17 7250156 7250249 -82254304 + HAL1 LINE L1 776 869 -1638 1025 229 64 74 chr17 7250289 7250788 -82253765 + HAL1 LINE L1 971 1464 -1043 1961 199 43 21 chr17 7250832 7251250 -82253303 + L1MDa LINE L1 17 443 -6097 1366 165 30 33 chr17 7251280 7251583 -82252970 + L1MD1 LINE L1 5446 5747 -495 1087 121 0 0 chr17 7251583 7251724 -82252829 - AluJb SINE Alu -15 297 157 1971 172 135 31 chr17 7251726 7252179 -82252374 + L1MD1 LINE L1 5742 6241 -1 549 128 35 106 chr17 7252174 7252315 -82252238 + HAL1 LINE L1 1566 1696 -811 * 785 114 16 32 chr17 7252324 7252447 -82252106 + FLAM_C SINE Alu 19 139 -4 232 317 24 0 chr17 7252452 7252534 -82252019 + HAL1 LINE L1 1692 1775 -732 254 300 8 42 chr17 7253027 7253147 -82251406 + L1ME2 LINE L1 5966 6081 -83 326 376 143 8 chr17 7253257 7253515 -82251038 + L3 LINE CR1 1284 1576 -1 247 330 112 86 chr17 7255142 7255375 -82249178 + L2 LINE L2 2945 3183 -89 197 292 233 8 chr17 7256343 7256463 -82248090 + MIR3 SINE MIR 16 162 -46 372 233 68 53 chr17 7256923 7257056 -82247497 - L2 LINE L2 0 3313 3179 28 29 0 0 chr17 7257742 7257777 -82246776 + AT_rich Low_complexity Low_complexity 1 35 0 1708 134 4 8 chr17 7257845 7258099 -82246454 - AluJo SINE Alu 0 312 60 1907 146 31 0 chr17 7258642 7258929 -82245624 - AluJo SINE Alu -15 297 2 25 51 0 0 chr17 7259085 7259124 -82245429 + AT_rich Low_complexity Low_complexity 1 39 0 184 297 94 16 chr17 7259143 7259207 -82245346 + MIR SINE MIR 25 93 -169 277 345 75 51 chr17 7259662 7259924 -82244629 + L2 LINE L2 2444 2698 -616 2160 118 0 0 chr17 7259924 7260212 -82244341 + AluSq SINE Alu 1 288 -25 189 94 0 0 chr17 7260218 7260250 -82244303 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 277 345 75 51 chr17 7260250 7260313 -82244240 + L2 LINE L2 2702 2784 -530 997 285 142 34 chr17 7260313 7261900 -82242653 + L1ME3A LINE L1 4162 5929 -233 544 156 0 11 chr17 7262050 7262140 -82242413 + Tigger7 DNA MER2_type 22 110 -595 2364 91 0 0 chr17 7262140 7262437 -82242116 - AluSx SINE Alu -15 297 1 1044 96 0 7 chr17 7262437 7262573 -82241980 - AluSq/x SINE Alu -177 135 1 1214 188 14 5 chr17 7262588 7262811 -82241742 + Tigger7 DNA MER2_type 201 425 -308 1342 83 0 0 chr17 7262811 7262980 -82241573 + AluY SINE Alu 140 308 -3 330 248 102 80 chr17 7263839 7263881 -82240672 - MIR3 SINE MIR -52 156 116 2171 120 0 3 chr17 7263881 7264180 -82240373 + AluSx SINE Alu 1 298 -14 330 248 102 80 chr17 7264180 7264274 -82240279 - MIR3 SINE MIR -92 116 17 214 345 126 8 chr17 7264547 7264666 -82239887 - L2 LINE L2 -6 3266 3134 388 242 11 22 chr17 7264779 7264870 -82239683 + MER21B LTR ERV1 1 90 -773 3585 188 98 29 chr17 7264892 7265159 -82239394 + MER21B LTR ERV1 19 266 -597 2377 94 3 0 chr17 7265159 7265467 -82239086 + AluSp SINE Alu 1 309 -4 3585 188 98 29 chr17 7265467 7265988 -82238565 + MER21B LTR ERV1 266 861 -2 2281 111 0 3 chr17 7266285 7266583 -82237970 + AluSx SINE Alu 1 297 -15 2242 55 0 4 chr17 7266752 7267023 -82237530 - AluSg SINE Alu -40 270 1 2278 92 0 0 chr17 7267747 7268062 -82236491 + AluSx SINE Alu 1 315 0 2072 111 48 3 chr17 7268499 7268788 -82235765 + AluSx SINE Alu 1 302 -10 883 143 12 20 chr17 7268822 7269066 -82235487 + GA-rich Low_complexity Low_complexity 1 242 0 442 261 85 20 chr17 7269188 7269341 -82235212 + L1ME3A LINE L1 5989 6151 -19 1787 170 0 0 chr17 7269341 7269630 -82234923 - AluJo SINE Alu -19 293 5 342 185 46 0 chr17 7269758 7269823 -82234730 - HsTC2 DNA Tc2 -3 1895 1828 533 335 62 21 chr17 7269961 7270298 -82234255 + L1MC/D LINE L1 5292 5642 -2166 216 97 0 0 chr17 7270325 7270356 -82234197 + (TA)n Simple_repeat Simple_repeat 1 31 0 507 312 55 18 chr17 7273701 7273919 -82230634 - L2 LINE L2 -427 2887 2662 321 26 0 0 chr17 7274444 7274482 -82230071 + (CA)n Simple_repeat Simple_repeat 1 38 0 211 250 68 57 chr17 7275021 7275109 -82229444 - L3 LINE CR1 -151 1426 1338 2217 112 7 7 chr17 7275292 7275595 -82228958 + AluSx SINE Alu 1 303 -9 1657 149 91 0 chr17 7275632 7275908 -82228645 - AluSx SINE Alu -11 301 1 301 281 70 9 chr17 7276527 7276641 -82227912 + MER5C DNA MER1_type 1 121 -203 336 181 19 67 chr17 7276653 7276758 -82227795 + MER5C DNA MER1_type 225 324 0 307 322 17 17 chr17 7279330 7279504 -82225049 - L1ME LINE L1 -364 5757 5584 1462 156 0 13 chr17 7279803 7280055 -82224498 + AluSx SINE Alu 61 309 0 1152 211 97 20 chr17 7280067 7280365 -82224188 + L1MC4 LINE L1 5296 5616 -2192 383 186 72 10 chr17 7280370 7280467 -82224086 - MER50 LTR ERV1 -150 584 482 5907 200 71 74 chr17 7280467 7281792 -82222761 + L1MC4 LINE L1 5620 6870 -1125 1870 100 34 65 chr17 7281792 7282108 -82222445 - AluSx SINE Alu 0 307 1 5907 200 71 74 chr17 7282108 7283230 -82221323 + L1MC4 LINE L1 6870 7993 -2 3207 206 36 16 chr17 7283241 7283935 -82220618 + L1ME2 LINE L1 5431 6138 -26 2484 90 0 3 chr17 7283999 7284310 -82220243 - AluSx SINE Alu -2 310 1 630 324 62 35 chr17 7284555 7284895 -82219658 + L1MC4 LINE L1 7694 8042 0 201 74 0 0 chr17 7286406 7286433 -82218120 + (CA)n Simple_repeat Simple_repeat 2 28 0 406 258 101 22 chr17 7293524 7293703 -82210850 + MIR SINE MIR 49 256 -6 246 305 4 26 chr17 7294745 7294839 -82209714 - MIR SINE MIR -67 141 48 3063 222 131 12 chr17 7295007 7295968 -82208585 + L1MC4 LINE L1 6393 7467 -575 799 246 135 3 chr17 7295955 7296244 -82208309 + L1MD3 LINE L1 7657 7983 -12 * 4057 175 47 56 chr17 7296289 7297267 -82207286 + LTR5 LTR ERVK 1 969 0 405 262 248 0 chr17 7297342 7297483 -82207070 - MER5A DNA MER1_type 0 189 14 314 270 0 0 chr17 7297665 7297739 -82206814 + MIR SINE MIR 68 141 -121 506 263 154 65 chr17 7297816 7298231 -82206322 + L3 LINE CR1 726 1177 -400 569 276 58 45 chr17 7298293 7298536 -82206017 - MER102b DNA MER1_type -48 293 48 471 275 191 11 chr17 7298571 7298844 -82205709 + L3 LINE CR1 1254 1575 -2 204 67 0 0 chr17 7299113 7299143 -82205410 + (T)n Simple_repeat Simple_repeat 1 30 0 282 234 0 0 chr17 7299250 7299314 -82205239 + MIR SINE MIR 185 248 -14 723 287 42 87 chr17 7299459 7299814 -82204739 - L2 LINE L2 -446 2868 2530 1980 51 0 8 chr17 7300810 7301047 -82203506 + AluY SINE Alu 67 301 -10 1018 267 75 20 chr17 7302841 7302875 -82201678 - L2 LINE L2 -17 3296 3265 2172 115 46 0 chr17 7302875 7303224 -82201329 - MER47A DNA MER2_type -1 365 1 1018 267 75 20 chr17 7303224 7303791 -82200762 - L2 LINE L2 -48 3265 2670 908 161 8 128 chr17 7303797 7304046 -82200507 + MER20 DNA MER1_type 1 219 0 196 103 0 0 chr17 7305407 7305436 -82199117 + MIR SINE MIR 224 252 -10 203 354 0 0 chr17 7305856 7305938 -82198615 + C-rich Low_complexity Low_complexity 6 87 0 200 103 0 0 chr17 7306228 7306257 -82198296 + MIR SINE MIR 224 252 -10 2373 100 0 0 chr17 7308098 7308389 -82196164 + AluSc SINE Alu 2 292 -17 405 286 2 24 chr17 7309161 7309313 -82195240 + MIR SINE MIR 16 160 -48 1839 146 3 48 chr17 7309326 7309635 -82194918 + AluJb SINE Alu 1 295 -17 446 0 19 0 chr17 7309701 7309755 -82194798 + (TC)n Simple_repeat Simple_repeat 2 56 0 205 284 0 15 chr17 7310951 7311018 -82193535 + G-rich Low_complexity Low_complexity 2 67 0 796 271 19 25 chr17 7311344 7311652 -82192901 - L1MEc LINE L1 -5966 430 44 986 149 14 0 chr17 7311907 7312114 -82192439 - AluSx SINE Alu 0 349 141 611 99 0 0 chr17 7312114 7312195 -82192358 - AluSx SINE Alu -231 82 2 468 212 128 33 chr17 7312342 7312598 -82191955 + LTR50 LTR ERVL 216 586 -209 293 244 99 45 chr17 7312614 7312815 -82191738 - L1M4 LINE L1 -747 5399 5188 409 218 23 68 chr17 7312948 7313081 -82191472 - MER112 DNA MER1_type -6 254 128 185 105 0 53 chr17 7313089 7313127 -82191426 + (GGAA)n Simple_repeat Simple_repeat 4 39 0 1961 91 76 0 chr17 7313141 7313433 -82191120 - AluSx SINE Alu 0 312 1 219 239 76 65 chr17 7314190 7314282 -82190271 - MIR3 SINE MIR -35 173 81 2414 94 0 0 chr17 7314407 7314705 -82189848 + AluSc SINE Alu 1 298 -11 235 289 26 26 chr17 7314775 7314851 -82189702 - ORSL DNA AcHobo 0 275 200 2059 173 66 12 chr17 7314915 7315325 -82189228 + MSTB1 LTR MaLR 1 432 0 2161 118 0 37 chr17 7315553 7315874 -82188679 - AluSx SINE Alu -3 309 1 287 100 0 0 chr17 7315874 7315914 -82188639 - Alu SINE Alu -259 41 2 252 188 318 0 chr17 7315915 7316000 -82188553 - MER112 DNA MER1_type -141 119 8 1823 121 38 11 chr17 7316384 7316648 -82187905 - AluSx SINE Alu -41 271 1 631 245 159 14 chr17 7316674 7316882 -82187671 - MIR SINE MIR -10 252 15 224 261 204 13 chr17 7316993 7317150 -82187403 + L3 LINE CR1 1192 1378 -199 2345 98 0 0 chr17 7317181 7317476 -82187077 + AluSg SINE Alu 1 295 -15 2182 127 3 3 chr17 7318355 7318662 -82185891 - AluSg SINE Alu -3 307 1 517 258 108 27 chr17 7318667 7318853 -82185700 + L2 LINE L2 3113 3313 0 2391 97 13 0 chr17 7320195 7320494 -82184059 - AluSx SINE Alu -9 303 1 749 316 22 26 chr17 7320582 7320895 -82183658 - L1ME LINE L1 -426 5695 5384 2504 79 0 3 chr17 7321978 7322283 -82182270 - AluSg SINE Alu -6 304 1 242 243 65 19 chr17 7322329 7322436 -82182117 - L1ME4a LINE L1 -11 6110 5999 232 293 115 5 chr17 7322490 7322681 -82181872 - L1ME4a LINE L1 -218 5903 5692 2088 120 0 17 chr17 7322682 7322981 -82181572 + AluSx SINE Alu 1 294 -18 1030 125 0 80 chr17 7322983 7323159 -82181394 + AluSg/x SINE Alu 138 299 -13 322 266 126 14 chr17 7323159 7323302 -82181251 - L1ME4a LINE L1 -412 5709 5551 267 278 106 100 chr17 7323461 7323554 -82180999 - MIR SINE MIR -62 200 104 2429 74 0 35 chr17 7323554 7323865 -82180688 + AluSq SINE Alu 1 300 -13 267 278 106 100 chr17 7323865 7323951 -82180602 - MIR SINE MIR -158 104 20 279 274 45 101 chr17 7325231 7325410 -82179143 - MIR SINE MIR -37 225 57 183 284 198 0 chr17 7325784 7325865 -82178688 + L2 LINE L2 3162 3258 -14 183 294 103 0 chr17 7325975 7326043 -82178510 + L2 LINE L2 3149 3223 -49 216 97 0 0 chr17 7326098 7326129 -82178424 + (CA)n Simple_repeat Simple_repeat 1 31 0 494 262 70 60 chr17 7328499 7328791 -82175762 - L2 LINE L2 -69 3244 2947 1051 207 4 40 chr17 7328791 7329018 -82175535 + MER20 DNA MER1_type 1 219 0 180 0 0 0 chr17 7329075 7329095 -82175458 + (T)n Simple_repeat Simple_repeat 1 20 0 656 172 37 15 chr17 7329294 7329428 -82175125 + AluSg/x SINE Alu 135 271 -39 335 291 99 0 chr17 7329450 7329591 -82174962 + L1MC/D LINE L1 5655 5809 -1999 2396 47 0 7 chr17 7329593 7329871 -82174682 + AluY SINE Alu 17 292 -19 1598 216 100 10 chr17 7329899 7330381 -82174172 + L1ME2 LINE L1 5633 6157 -7 2005 65 4 0 chr17 7330402 7330649 -82173904 - AluY SINE Alu -63 248 1 2035 115 21 7 chr17 7331490 7331777 -82172776 - AluSg1 SINE Alu -18 291 1 259 183 133 0 chr17 7332484 7332544 -82172009 - MIR3 SINE MIR -29 179 112 810 282 103 46 chr17 7332771 7333335 -82171218 + MLT1L LTR MaLR 6 601 -14 223 337 32 11 chr17 7333356 7333451 -82171102 - MIR3 SINE MIR -102 106 10 441 315 22 28 chr17 7334312 7334490 -82170063 + MIR SINE MIR 20 196 -66 279 333 79 9 chr17 7336659 7336773 -82167780 - L3 LINE CR1 -1271 306 185 297 254 0 0 chr17 7337792 7337851 -82166702 - L2 LINE L2 -4 3309 3251 267 208 0 0 chr17 7338058 7338111 -82166442 + L2 LINE L2 3261 3313 0 420 245 7 0 chr17 7338171 7338311 -82166242 + L1ME4a LINE L1 5685 5828 -293 2435 76 0 3 chr17 7338392 7338683 -82165870 + AluSq SINE Alu 1 290 -23 686 269 108 11 chr17 7338824 7339110 -82165443 - L1ME4a LINE L1 -248 5873 5560 306 0 0 0 chr17 7339967 7340001 -82164552 + (A)n Simple_repeat Simple_repeat 1 34 0 442 336 36 38 chr17 7340868 7341285 -82163268 + L2 LINE L2 2097 2512 -802 373 310 66 10 chr17 7341377 7341574 -82162979 - L2 LINE L2 -1103 2211 2004 269 349 38 9 chr17 7341900 7342006 -82162547 + L2 LINE L2 3133 3241 -31 1368 105 4 0 chr17 7342011 7342261 -82162292 + (TGGA)n Simple_repeat Simple_repeat 1 251 0 226 296 102 11 chr17 7342261 7342349 -82162204 - L2 LINE L2 0 3313 3218 226 370 73 12 chr17 7342723 7342888 -82161665 - L2 LINE L2 0 3272 3098 468 0 0 0 chr17 7343084 7343136 -82161417 + (CA)n Simple_repeat Simple_repeat 2 53 0 629 313 103 17 chr17 7343165 7343698 -82160855 + L1ME4a LINE L1 5405 5983 -138 2271 92 24 3 chr17 7344242 7344534 -82160019 + AluSg SINE Alu 1 298 -12 2305 103 0 3 chr17 7345296 7345596 -82158957 - AluSx SINE Alu -13 299 1 830 292 4 26 chr17 7348487 7348661 -82155892 + MIR SINE MIR 35 204 -58 2117 122 0 25 chr17 7348661 7349027 -82155526 + AluSx SINE Alu 1 312 0 830 292 4 26 chr17 7349027 7349085 -82155468 + MIR SINE MIR 204 262 0 209 222 0 0 chr17 7349316 7349361 -82155192 + (TTA)n Simple_repeat Simple_repeat 2 46 0 2384 94 0 0 chr17 7349379 7349676 -82154877 - AluSx SINE Alu -15 297 1 1138 82 0 0 chr17 7349676 7349811 -82154742 - AluSq/x SINE Alu -178 135 1 231 224 167 32 chr17 7350642 7350798 -82153755 - L2 LINE L2 -238 3034 2858 2249 104 3 0 chr17 7351335 7351634 -82152919 + AluSg SINE Alu 1 300 -10 237 180 0 0 chr17 7354122 7354172 -82150381 + CT-rich Low_complexity Low_complexity 2 51 0 293 270 73 73 chr17 7354607 7354907 -82149646 + L2 LINE L2 2949 3248 -24 573 308 59 0 chr17 7355741 7355957 -82148596 + MIR SINE MIR 7 246 -16 204 214 0 0 chr17 7357259 7357301 -82147252 + CT-rich Low_complexity Low_complexity 1 42 0 383 185 50 8 chr17 7357385 7357504 -82147049 + GA-rich Low_complexity Low_complexity 3 126 0 21 0 0 0 chr17 7357525 7357546 -82147007 + AT_rich Low_complexity Low_complexity 1 21 0 957 155 0 0 chr17 7357573 7357816 -82146737 + L1PB3 LINE L1 5859 6151 -3 2166 112 17 0 chr17 7357877 7358173 -82146380 - AluSq SINE Alu -12 301 1 3036 173 17 6 chr17 7358335 7358877 -82145676 - MER6A DNA MER2_type 0 605 58 713 151 0 0 chr17 7358888 7359007 -82145546 - AluJb SINE Alu -4 308 190 370 152 0 80 chr17 7359008 7359083 -82145470 - MER6 DNA MER2_type -82 62 -1 2285 96 0 0 chr17 7359150 7359473 -82145080 - AluSc SINE Alu 0 323 1 781 201 69 0 chr17 7359723 7359897 -82144656 - MER20 DNA MER1_type 0 219 34 677 236 55 0 chr17 7360078 7360243 -82144310 + MER97c DNA MER1_type? 5 178 -912 225 0 0 0 chr17 7360668 7360693 -82143860 + (TG)n Simple_repeat Simple_repeat 2 26 0 21 57 0 0 chr17 7360851 7360886 -82143667 + AT_rich Low_complexity Low_complexity 1 35 0 264 59 0 0 chr17 7361334 7361368 -82143185 + (CA)n Simple_repeat Simple_repeat 2 35 0 825 122 0 20 chr17 7361392 7361641 -82142912 + (TG)n Simple_repeat Simple_repeat 1 243 0 305 221 126 11 chr17 7361977 7362072 -82142481 - MIR SINE MIR -62 146 41 23 68 0 0 chr17 7363348 7363392 -82141161 + GC_rich Low_complexity Low_complexity 1 44 0 218 307 13 0 chr17 7364152 7364227 -82140326 - L2 LINE L2 -11 3261 3186 766 143 33 91 chr17 7364669 7364800 -82139753 - L1MA6 LINE L1 0 6300 6184 2409 97 0 6 chr17 7364800 7365111 -82139442 - AluSx SINE Alu -3 309 1 766 143 33 91 chr17 7365111 7365189 -82139364 - L1MA6 LINE L1 -116 6184 6103 4754 54 29 2 chr17 7365337 7365966 -82138587 - L1PA8 LINE L1 0 6172 5527 564 292 75 18 chr17 7366010 7366236 -82138317 + MIR SINE MIR 21 259 -3 621 78 0 49 chr17 7366327 7366429 -82138124 + AluY SINE Alu 208 304 -7 596 273 116 29 chr17 7366553 7366898 -82137655 + L1M4 LINE L1 4495 4869 -1277 1315 181 24 74 chr17 7366912 7367037 -82137516 + Charlie2a DNA MER1_type 1011 1141 -1721 2410 77 0 48 chr17 7367037 7367349 -82137204 - AluSg SINE Alu -13 297 1 1315 181 24 74 chr17 7367349 7367644 -82136909 + Charlie2a DNA MER1_type 1141 1410 -1452 1855 174 106 26 chr17 7367663 7368088 -82136465 + LTR2B LTR ERV1 32 490 0 249 200 67 13 chr17 7368418 7368493 -82136060 + L1MD3 LINE L1 7905 7983 -12 22 0 0 0 chr17 7368555 7368577 -82135976 + AT_rich Low_complexity Low_complexity 1 22 0 2266 110 10 0 chr17 7368577 7368887 -82135666 - AluSq SINE Alu 0 313 1 1058 149 199 10 chr17 7368938 7369139 -82135414 + AluJb SINE Alu 1 239 -73 358 328 64 17 chr17 7369604 7369816 -82134737 - MLT1H LTR MaLR -150 264 65 1086 250 37 10 chr17 7370003 7370299 -82134254 + Charlie2a DNA MER1_type 1475 1778 -1084 705 145 0 0 chr17 7370299 7370416 -82134137 + FRAM SINE Alu 52 168 -8 25 0 0 0 chr17 7370563 7370588 -82133965 + AT_rich Low_complexity Low_complexity 1 25 0 2276 99 0 0 chr17 7371147 7371439 -82133114 - AluSc SINE Alu -16 293 2 3347 241 102 35 chr17 7371627 7372388 -82132165 + L2 LINE L2 1631 2340 -973 2100 106 29 4 chr17 7372388 7372662 -82131891 + AluSx SINE Alu 1 281 -31 3347 241 102 35 chr17 7372662 7372986 -82131567 + L2 LINE L2 2340 2641 -672 2493 115 20 54 chr17 7372986 7373229 -82131324 - MSTA LTR MaLR 0 428 178 2271 117 0 7 chr17 7373229 7373537 -82131016 - AluSg SINE Alu -4 306 1 2493 115 20 54 chr17 7373537 7373549 -82131004 - MSTA LTR MaLR -250 178 167 2530 71 0 3 chr17 7373549 7373858 -82130695 - AluY SINE Alu -3 308 1 2493 115 20 54 chr17 7373858 7374044 -82130509 - MSTA LTR MaLR -261 167 1 3347 241 102 35 chr17 7374044 7374284 -82130269 + L2 LINE L2 2641 2864 -449 2372 94 3 3 chr17 7374284 7374582 -82129971 + AluSx SINE Alu 1 298 -14 6874 45 7 2 chr17 7374583 7375773 -82128780 + L1PA6 LINE L1 4960 6152 -2 3347 241 102 35 chr17 7375773 7376023 -82128530 + L2 LINE L2 2863 3312 -1 373 316 84 77 chr17 7375997 7376904 -82127649 - L2 LINE L2 -796 2518 1606 * 300 137 0 0 chr17 7377354 7377405 -82127148 + (TA)n Simple_repeat Simple_repeat 1 51 0 22 35 0 0 chr17 7377413 7377442 -82127111 + AT_rich Low_complexity Low_complexity 1 29 0 203 232 62 0 chr17 7377444 7377556 -82126997 + (TA)n Simple_repeat Simple_repeat 1 119 0 938 220 11 0 chr17 7377556 7377733 -82126820 - AluJo SINE Alu -17 295 117 861 113 7 7 chr17 7377764 7377906 -82126647 - L1MB8 LINE L1 -11 6167 6026 346 137 0 0 chr17 7377906 7377957 -82126596 + L1 LINE L1 17 67 -7498 17905 168 47 37 chr17 7378111 7380070 -82124483 + L1 LINE L1 16 1954 -5611 328 60 0 8 chr17 7380070 7380121 -82124432 + MER4E LTR ERV1 653 692 -74 17905 168 47 37 chr17 7380121 7382867 -82121686 + L1 LINE L1 1954 4821 -2744 5219 135 18 68 chr17 7382870 7383875 -82120678 - HERVH LTR ERV1 -3619 4094 3140 * 8686 162 37 40 chr17 7383854 7386405 -82118148 - HERVH LTR ERV1 -3622 2907 793 2840 129 9 24 chr17 7386459 7386925 -82117628 - HERVH LTR ERV1 -7254 459 1 1226 171 129 89 chr17 7386932 7387358 -82117195 - LTR7 LTR ERV1 -7 443 1 3012 211 8 3 chr17 7387358 7388016 -82116537 + L1 LINE L1 5755 6415 -1150 933 88 0 0 chr17 7388017 7388130 -82116423 + AluY SINE Alu 1 113 -198 1824 186 121 38 chr17 7388347 7388794 -82115759 - LTR2B LTR ERV1 0 490 7 3208 246 192 42 chr17 7388813 7390650 -82113903 - HAL1 LINE L1 -145 2362 252 1895 251 76 44 chr17 7390660 7390978 -82113575 + L2 LINE L2 2286 2592 -721 2016 73 4 0 chr17 7390978 7391238 -82113315 + L1PA8 LINE L1 5912 6172 0 1895 251 76 44 chr17 7391238 7391847 -82112706 + L2 LINE L2 2592 3254 -59 5731 137 9 17 chr17 7391849 7393195 -82111358 + L1MA3 LINE L1 4333 5668 -637 3749 204 53 4 chr17 7393198 7393894 -82110659 + L1PA12 LINE L1 1 730 -6851 * 5647 144 24 19 chr17 7393890 7394839 -82109714 + L1PA13 LINE L1 4379 5342 -821 2427 96 0 0 chr17 7394839 7395151 -82109402 - AluSx SINE Alu 0 312 1 5647 144 24 19 chr17 7395151 7395958 -82108595 + L1PA13 LINE L1 5342 6143 -20 4243 109 15 14 chr17 7395972 7396466 -82108087 + L1MA3 LINE L1 5652 6152 -153 2274 67 3 11 chr17 7396466 7396792 -82107761 + AluY SINE Alu 1 324 0 4243 109 15 14 chr17 7396792 7396947 -82107606 + L1MA3 LINE L1 6152 6305 0 1911 221 81 109 chr17 7396996 7397447 -82107106 + L1ME LINE L1 503 965 -5575 642 151 0 0 chr17 7397447 7397553 -82107000 + L1MA4 LINE L1 6180 6285 -15 1911 221 81 109 chr17 7397553 7397602 -82106951 + L1ME LINE L1 965 1014 -5526 2355 91 0 0 chr17 7397602 7397900 -82106653 - AluSg SINE Alu -12 298 1 1911 221 81 109 chr17 7397900 7398913 -82105640 + L1ME LINE L1 1014 1970 -4570 1988 152 3 0 chr17 7398913 7399232 -82105321 + AluSx SINE Alu 1 312 0 300 214 18 0 chr17 7399325 7399381 -82105172 + MER77 LTR ERV1 292 348 -257 555 238 26 16 chr17 7399420 7399609 -82104944 + L1ME LINE L1 2397 2587 -3953 297 0 0 0 chr17 7400348 7400381 -82104172 + (CA)n Simple_repeat Simple_repeat 2 34 0 600 284 26 0 chr17 7400991 7401146 -82103407 + MER63 DNA MER1_type 1 785 -277 2341 110 0 0 chr17 7401150 7401489 -82103064 + AluSg1 SINE Alu 1 339 0 1265 219 64 0 chr17 7401841 7402106 -82102447 + AluJo SINE Alu 1 282 -30 2373 80 7 3 chr17 7404089 7404391 -82100162 - AluY SINE Alu -8 303 1 2482 86 0 0 chr17 7404392 7404693 -82099860 - AluSg SINE Alu -9 301 1 200 326 184 0 chr17 7404884 7404982 -82099571 + MIR SINE MIR 15 130 -132 205 248 171 19 chr17 7405030 7405135 -82099418 + MIR SINE MIR 116 236 -26 2296 93 3 37 chr17 7406884 7407208 -82097345 - AluSq SINE Alu 0 313 1 32 43 0 0 chr17 7407509 7407555 -82096998 + AT_rich Low_complexity Low_complexity 1 46 0 575 209 25 61 chr17 7407580 7407776 -82096777 - L1ME1 LINE L1 -6 6160 5972 252 0 0 0 chr17 7409668 7409696 -82094857 + (TG)n Simple_repeat Simple_repeat 2 29 0 2486 76 0 0 chr17 7410106 7410407 -82094146 + AluSg SINE Alu 1 301 -9 2408 72 3 0 chr17 7410911 7411202 -82093351 + AluSp SINE Alu 1 292 -21 243 0 0 0 chr17 7411759 7411786 -82092767 + (CACAA)n Simple_repeat Simple_repeat 3 29 0 295 221 147 22 chr17 7413040 7413176 -82091377 + Charlie8 DNA MER1_type 95 247 -2170 2081 107 4 4 chr17 7413978 7414283 -82090270 + AluSg SINE Alu 1 305 0 803 214 77 72 chr17 7414384 7414785 -82089768 - L1MC5 LINE L1 -54 7907 7505 24 0 0 0 chr17 7414995 7415019 -82089534 + AT_rich Low_complexity Low_complexity 1 24 0 7378 31 0 0 chr17 7415032 7416395 -82088158 - L1PA4 LINE L1 0 6155 4769 268 274 21 0 chr17 7416859 7416954 -82087599 + MIR SINE MIR 47 143 -119 623 256 53 19 chr17 7417021 7417228 -82087325 - MIR SINE MIR 0 262 49 3735 45 0 0 chr17 7417430 7417877 -82086676 - L1PA8 LINE L1 -5 6167 5721 422 302 105 12 chr17 7418754 7418926 -82085627 + MIR3 SINE MIR 19 206 -2 460 252 24 155 chr17 7419659 7420040 -82084513 + L2 LINE L2 2904 3234 -38 15661 152 15 24 chr17 7422152 7425270 -82079283 + L1MA3 LINE L1 2950 6007 -1717 225 0 0 0 chr17 7425270 7425295 -82079258 + (TG)n Simple_repeat Simple_repeat 2 26 0 15661 152 15 24 chr17 7425295 7426822 -82077731 + L1MA3 LINE L1 6007 7547 -177 1797 220 74 16 chr17 7427395 7427744 -82076809 - L1MB5 LINE L1 0 6174 5794 2073 84 0 15 chr17 7427744 7428017 -82076536 - AluSx SINE Alu -8 304 36 1797 220 74 16 chr17 7428017 7428099 -82076454 - L1MB5 LINE L1 -380 5794 5718 492 213 4 12 chr17 7428099 7428212 -82076341 + MER5A DNA MER1_type 4 104 -74 203 176 0 0 chr17 7428264 7428298 -82076255 - MER5B DNA MER1_type -4 174 141 202 200 241 22 chr17 7428512 7428604 -82075949 + MIR SINE MIR 40 150 -112 500 247 9 92 chr17 7428624 7428851 -82075702 + L2 LINE L2 1422 1629 -1685 2356 243 171 47 chr17 7429089 7429552 -82075001 + L2 LINE L2 1699 2104 -1209 2388 92 0 0 chr17 7429552 7429857 -82074696 + AluY SINE Alu 1 305 -6 2356 243 171 47 chr17 7429857 7430731 -82073822 + L2 LINE L2 2104 3186 -127 1389 213 61 38 chr17 7430781 7431255 -82073298 - HAL1 LINE L1 -109 2398 1914 696 216 30 30 chr17 7431298 7431465 -82073088 - HAL1 LINE L1 -706 1801 1635 458 213 0 0 chr17 7431531 7431625 -82072928 + L1MA5 LINE L1 6207 6300 0 315 287 93 20 chr17 7431958 7432108 -82072445 - L1MC5 LINE L1 -152 7809 7649 267 31 0 0 chr17 7432154 7432186 -82072367 + (CTG)n Simple_repeat Simple_repeat 2 33 0 2164 135 3 3 chr17 7432531 7432843 -82071710 - AluSx SINE Alu 0 312 1 1503 247 74 108 chr17 7432883 7433702 -82070851 - L1MEd LINE L1 -744 1746 904 953 100 20 0 chr17 7433702 7433852 -82070701 + L1MA7 LINE L1 6135 6287 -4 1503 247 74 108 chr17 7433852 7434438 -82070115 - L1MEd LINE L1 -1586 904 300 1230 186 138 63 chr17 7434528 7434862 -82069691 - MLT1A1 LTR MaLR -6 359 1 314 248 71 9 chr17 7434893 7435006 -82069547 - L1MEd LINE L1 -5981 138 19 282 296 41 0 chr17 7435728 7435826 -82068727 - MIR3 SINE MIR -39 169 68 650 161 206 7 chr17 7436643 7436798 -82067755 + MER53 DNA DNA 1 186 -3 2309 99 3 3 chr17 7436892 7437196 -82067357 - AluSx SINE Alu -7 305 2 6600 176 19 16 chr17 7437727 7439009 -82065544 + L1P4 LINE L1 3870 5155 -991 1160 139 0 0 chr17 7439005 7439185 -82065368 + L1P4 LINE L1 5603 5782 -383 * 962 103 0 0 chr17 7439185 7439311 -82065242 + AluSq/x SINE Alu 1 126 -187 192 316 18 44 chr17 7439506 7439620 -82064933 + MIR SINE MIR 151 261 -1 202 217 0 0 chr17 7440064 7440110 -82064443 + MIR SINE MIR 28 73 -135 273 252 34 75 chr17 7440695 7440842 -82063711 + MIR SINE MIR 12 152 -110 266 283 11 11 chr17 7441862 7441954 -82062599 - MIR SINE MIR -50 212 121 366 184 41 51 chr17 7441962 7442060 -82062493 + MIR SINE MIR 38 134 -128 2298 103 3 22 chr17 7443164 7443483 -82061070 + AluSq SINE Alu 1 313 0 294 261 11 11 chr17 7444548 7444640 -82059913 - MIR SINE MIR -50 212 121 338 165 47 47 chr17 7444661 7444746 -82059807 + MIR SINE MIR 50 134 -128 325 297 125 1 chr17 7445071 7445282 -82059271 + MIR SINE MIR 16 250 -12 2069 115 44 0 chr17 7445394 7445689 -82058864 + AluSq SINE Alu 3 310 -3 774 196 0 19 chr17 7445709 7445778 -82058775 - AluJb SINE Alu 0 361 292 1030 93 6 27 chr17 7445778 7445961 -82058592 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 774 196 0 19 chr17 7445961 7446098 -82058455 - AluJb SINE Alu -69 292 158 221 308 0 0 chr17 7446207 7446272 -82058281 - L2 LINE L2 -207 3065 3001 221 353 111 0 chr17 7446472 7446716 -82057837 - L2 LINE L2 -665 2649 2379 2142 123 13 3 chr17 7446736 7447037 -82057516 + AluSx SINE Alu 1 304 -8 335 88 0 32 chr17 7447441 7447504 -82057049 - FAM SINE Alu -4 171 116 2892 39 0 0 chr17 7447524 7447880 -82056673 - L1P LINE L1 -803 5343 4988 952 27 0 0 chr17 7447880 7447985 -82056568 + L1PA5 LINE L1 6040 6149 -5 486 280 83 0 chr17 7449191 7449359 -82055194 + MIR SINE MIR 10 191 -71 303 274 103 17 chr17 7449483 7449600 -82054953 + MIR SINE MIR 19 145 -63 276 299 47 0 chr17 7449660 7449767 -82054786 - MIR SINE MIR -123 139 28 2037 136 4 0 chr17 7450206 7450486 -82054067 + AluSx SINE Alu 1 281 -31 5736 65 22 12 chr17 7450486 7451243 -82053310 + MER4E LTR ERV1 2 766 0 38177 48 0 1 chr17 7451714 7456327 -82048226 - L1P LINE L1 -1535 4611 2 32 26 0 0 chr17 7456483 7456522 -82048031 + AT_rich Low_complexity Low_complexity 1 39 0 359 309 0 0 chr17 7456619 7456703 -82047850 + Cheshire DNA MER1_type 1 84 -2336 6024 131 45 38 chr17 7456704 7456936 -82047617 - L1MC2 LINE L1 -12 6332 6103 2200 130 10 0 chr17 7456936 7457244 -82047309 - AluSx SINE Alu -1 311 1 6024 131 45 38 chr17 7457244 7458149 -82046404 - L1MC2 LINE L1 -241 6103 5188 1046 248 90 3 chr17 7458152 7458442 -82046111 + Cheshire DNA MER1_type 77 391 -2029 2329 81 0 26 chr17 7458446 7458755 -82045798 - AluSq SINE Alu -12 301 1 225 0 0 0 chr17 7458938 7458963 -82045590 + (CAT)n Simple_repeat Simple_repeat 2 26 0 252 0 0 0 chr17 7459020 7459048 -82045505 + (TG)n Simple_repeat Simple_repeat 1 28 0 606 280 92 5 chr17 7459055 7459262 -82045291 - MIR SINE MIR -30 232 8 313 220 0 0 chr17 7459529 7459588 -82044965 - MER63 DNA MER1_type -315 745 687 2085 137 49 22 chr17 7459674 7460039 -82044514 + THE1C LTR MaLR 1 375 0 477 254 35 7 chr17 7460948 7461090 -82043463 - MIR SINE MIR -39 223 78 362 160 80 0 chr17 7461090 7461190 -82043363 + L1MC4 LINE L1 6982 7089 -953 496 231 162 48 chr17 7461219 7461265 -82043288 + L1ME3A LINE L1 5841 5880 -290 369 0 0 0 chr17 7461265 7461306 -82043247 + (CA)n Simple_repeat Simple_repeat 2 42 0 496 231 162 48 chr17 7461306 7461488 -82043065 + L1ME3A LINE L1 5880 6095 -75 498 184 10 19 chr17 7461495 7461598 -82042955 + MLT1E LTR MaLR 10 111 -482 6036 52 0 3 chr17 7462965 7463697 -82040856 - L1PA6 LINE L1 -5 6149 5420 22 0 0 0 chr17 7463731 7463753 -82040800 + AT_rich Low_complexity Low_complexity 1 22 0 2264 94 3 0 chr17 7463828 7464114 -82040439 + AluSp SINE Alu 5 291 -22 188 139 0 23 chr17 7464129 7464172 -82040381 + (TAA)n Simple_repeat Simple_repeat 3 44 0 288 248 256 15 chr17 7464185 7464318 -82040235 - MIR SINE MIR -19 243 79 583 240 69 6 chr17 7464423 7464598 -82039955 + MIR SINE MIR 63 248 -14 239 371 68 37 chr17 7464781 7465075 -82039478 - L2 LINE L2 -385 2929 2627 1422 212 156 47 chr17 7465272 7465702 -82038851 + MLT1J LTR MaLR 28 504 -7 2314 77 0 3 chr17 7466433 7466718 -82037835 - AluY SINE Alu -27 284 1 563 204 110 55 chr17 7466737 7466992 -82037561 - HAL1 LINE L1 -182 2325 2057 24 0 0 0 chr17 7467101 7467125 -82037428 + AT_rich Low_complexity Low_complexity 1 24 0 2260 207 53 14 chr17 7467323 7467873 -82036680 - HAL1 LINE L1 -542 1965 1395 2069 154 30 14 chr17 7467915 7468284 -82036269 + THE1C LTR MaLR 1 375 0 3322 117 190 3 chr17 7468287 7468861 -82035692 + THE1C-int LTR MaLR 4 684 -896 1801 166 3 3 chr17 7468873 7469157 -82035396 - AluJo SINE Alu -18 294 11 1579 238 107 46 chr17 7469157 7469809 -82034744 - HAL1 LINE L1 -1226 1281 590 391 306 65 36 chr17 7469914 7470162 -82034391 - HAL1 LINE L1 -2139 368 114 266 333 67 0 chr17 7470245 7470335 -82034218 - HAL1 LINE L1 -2396 111 16 2545 75 0 0 chr17 7470546 7470852 -82033701 - AluY SINE Alu -5 306 1 389 341 64 47 chr17 7471506 7472022 -82032531 - L2 LINE L2 -898 2416 1892 193 305 98 12 chr17 7472123 7472205 -82032348 + L2 LINE L2 3141 3229 -43 2544 253 70 36 chr17 7472212 7473348 -82031205 - L1ME3A LINE L1 0 6170 5074 477 0 0 0 chr17 7473348 7473401 -82031152 + (TAGA)n Simple_repeat Simple_repeat 2 54 0 2544 253 70 36 chr17 7473401 7473430 -82031123 - L1ME3A LINE L1 -1096 5074 5047 2293 95 0 0 chr17 7473430 7473725 -82030828 - AluY SINE Alu -16 295 1 2544 253 70 36 chr17 7473725 7473988 -82030565 - L1ME3A LINE L1 -1123 5047 4794 2467 75 3 7 chr17 7473988 7474293 -82030260 - AluSq SINE Alu -9 304 1 2544 253 70 36 chr17 7474293 7474577 -82029976 - L1ME3A LINE L1 -1376 4794 4393 2219 123 0 0 chr17 7474671 7474972 -82029581 - AluY SINE Alu -8 303 3 1026 265 52 34 chr17 7475124 7475449 -82029104 + MER102b DNA MER1_type 11 341 0 2127 115 7 0 chr17 7475600 7475886 -82028667 + AluSx SINE Alu 1 288 -24 816 192 0 0 chr17 7476045 7476175 -82028378 + MER2 DNA MER2_type 6 135 -210 329 131 16 0 chr17 7476177 7476238 -82028315 + CT-rich Low_complexity Low_complexity 2 63 0 701 216 0 8 chr17 7476242 7476376 -82028177 - FLAM_A SINE Alu 0 133 1 603 83 0 0 chr17 7476378 7476462 -82028091 + MER2 DNA MER2_type 127 210 -135 2087 203 115 12 chr17 7477182 7477694 -82026859 - L1ME3A LINE L1 -8 6162 5598 285 182 0 0 chr17 7477729 7477784 -82026769 + GA-rich Low_complexity Low_complexity 3 57 0 208 299 169 40 chr17 7477942 7478267 -82026286 - L3 LINE CR1 -162 1415 1049 293 301 96 15 chr17 7478694 7478830 -82025723 + MIR3 SINE MIR 29 175 -33 288 311 60 11 chr17 7479036 7479219 -82025334 + HAL1 LINE L1 1158 1349 -1158 828 175 19 31 chr17 7479278 7479438 -82025115 + MER2 DNA MER2_type 16 173 -172 188 46 0 161 chr17 7479477 7479564 -82024989 + (CAATA)n Simple_repeat Simple_repeat 2 74 0 369 250 0 0 chr17 7479660 7479736 -82024817 + MER2 DNA MER2_type 269 344 -1 421 315 160 18 chr17 7479841 7480184 -82024369 + HAL1 LINE L1 1526 1917 -590 601 183 76 8 chr17 7480286 7480417 -82024136 + FRAM SINE Alu 11 150 -26 22 35 0 0 chr17 7480417 7480446 -82024107 + AT_rich Low_complexity Low_complexity 1 29 0 869 154 0 0 chr17 7480486 7480616 -82023937 + FLAM_C SINE Alu 1 130 -3 263 310 70 20 chr17 7480866 7480966 -82023587 - L2 LINE L2 0 3272 3168 982 223 45 67 chr17 7480971 7481400 -82023153 + L1MC4a LINE L1 5593 6016 -105 446 296 133 26 chr17 7482689 7482915 -82021638 - MIR SINE MIR -4 258 9 791 218 19 28 chr17 7483563 7483774 -82020779 + L1MC4a LINE L1 5673 5881 -1927 278 53 0 26 chr17 7483784 7483822 -82020731 - FRAM/FAM SINE Alu -99 67 31 250 271 181 45 chr17 7483863 7484084 -82020469 + L1MC4a LINE L1 5918 6168 -1640 27 0 0 0 chr17 7484090 7484117 -82020436 + AT_rich Low_complexity Low_complexity 1 27 0 1432 153 12 81 chr17 7484660 7484980 -82019573 - AluJo SINE Alu -14 298 1 448 242 67 17 chr17 7484980 7485100 -82019453 + MIR SINE MIR 77 202 -60 1509 117 36 97 chr17 7485100 7485320 -82019233 - THE1C LTR MaLR 0 375 178 2408 96 0 0 chr17 7485320 7485621 -82018932 + AluSx SINE Alu 1 301 -11 1509 117 36 97 chr17 7485621 7485708 -82018845 - THE1C LTR MaLR -197 178 87 22 0 0 0 chr17 7486034 7486056 -82018497 + AT_rich Low_complexity Low_complexity 1 22 0 782 232 16 20 chr17 7486155 7486401 -82018152 - L1ME LINE L1 -5054 1016 772 1680 180 7 7 chr17 7486714 7487003 -82017550 - AluJb SINE Alu -23 289 1 22 35 0 0 chr17 7487389 7487418 -82017135 + AT_rich Low_complexity Low_complexity 1 29 0 192 291 18 0 chr17 7487449 7487504 -82017049 + L2 LINE L2 3249 3304 -9 2328 90 3 0 chr17 7487896 7488206 -82016347 + AluY SINE Alu 1 311 0 1314 249 28 82 chr17 7489162 7489732 -82014821 - MER34 LTR ERV1 -3 539 1 22 0 0 0 chr17 7490018 7490040 -82014513 + AT_rich Low_complexity Low_complexity 1 22 0 620 268 41 36 chr17 7490600 7490794 -82013759 - MIR SINE MIR -48 214 20 189 263 0 0 chr17 7490801 7490839 -82013714 - MIR SINE MIR -129 79 42 411 274 29 0 chr17 7491226 7491328 -82013225 - MIR SINE MIR 0 262 158 959 274 74 79 chr17 7491502 7492327 -82012226 + HAL1 LINE L1 2 1019 -1488 7214 53 10 0 chr17 7492333 7493671 -82010882 - L1PA7 LINE L1 0 6154 4801 2034 77 50 0 chr17 7493671 7493932 -82010621 + AluY SINE Alu 21 294 -17 13249 103 4 28 chr17 7493932 7496390 -82008163 - L1P3 LINE L1 -4009 2452 7 2410 145 36 19 chr17 7496892 7497089 -82007464 + MSTA LTR MaLR 1 193 -235 2719 144 44 2 chr17 7497089 7497500 -82007053 - MSTA LTR MaLR 0 428 1 2410 145 36 19 chr17 7497500 7497723 -82006830 + MSTA LTR MaLR 193 428 0 558 295 131 52 chr17 7498845 7498960 -82005593 - HAL1 LINE L1 -1709 798 693 2179 78 27 10 chr17 7498960 7499256 -82005297 - AluY SINE Alu -10 301 1 558 295 131 52 chr17 7499256 7499638 -82004915 - HAL1 LINE L1 -1814 693 262 2003 176 40 62 chr17 7499734 7499814 -82004739 - MSTB LTR MaLR 0 426 346 2064 87 4 0 chr17 7499814 7500080 -82004473 + AluSc SINE Alu 35 301 -8 2003 176 40 62 chr17 7500080 7500419 -82004134 - MSTB LTR MaLR -80 346 16 24 0 0 0 chr17 7500434 7500458 -82004095 + AT_rich Low_complexity Low_complexity 1 24 0 838 275 48 34 chr17 7500469 7500883 -82003670 + L1PBa LINE L1 135 554 -6309 883 226 43 4 chr17 7500909 7501139 -82003414 + L1PBa LINE L1 612 850 -6013 265 214 18 0 chr17 7501368 7501424 -82003129 - MER89-int LTR ERV1 -2166 2481 2425 692 147 121 17 chr17 7501437 7501553 -82003000 - FLAM_C SINE Alu -14 129 2 481 211 0 90 chr17 7502045 7502178 -82002375 - MER89-int LTR ERV1 -4076 860 740 390 304 52 55 chr17 7502622 7502911 -82001642 - MER89-int LTR ERV1 -3156 3645 3358 4151 133 44 5 chr17 7503613 7504250 -82000303 - L1PA15 LINE L1 -22 6143 5482 668 280 92 5 chr17 7504644 7504851 -81999702 + MIR SINE MIR 8 232 -30 252 0 0 0 chr17 7504858 7504886 -81999667 + (CA)n Simple_repeat Simple_repeat 1 28 0 225 0 0 0 chr17 7504943 7504968 -81999585 + (ATG)n Simple_repeat Simple_repeat 2 26 0 2614 24 7 0 chr17 7505151 7505447 -81999106 + AluY SINE Alu 1 298 -13 1152 151 5 11 chr17 7505452 7505638 -81998915 - Tigger3(Golem) DNA MER2_type -284 2745 2561 759 115 10 0 chr17 7505639 7505743 -81998810 + AluSg SINE Alu 2 106 -204 16234 215 27 29 chr17 7505843 7509624 -81994929 - L1PA13 LINE L1 -826 5971 2185 942 109 0 51 chr17 7509624 7509761 -81994792 - FLAM_C SINE Alu -3 130 1 16234 215 27 29 chr17 7509761 7510057 -81994496 - L1PA13 LINE L1 -4612 2185 1890 1738 123 88 0 chr17 7510057 7510206 -81994347 - AluSg1 SINE Alu -24 285 151 360 0 0 0 chr17 7510206 7510246 -81994307 + (TG)n Simple_repeat Simple_repeat 2 41 0 1738 123 88 0 chr17 7510246 7510356 -81994197 - AluSg1 SINE Alu -158 151 3 16234 215 27 29 chr17 7510356 7511029 -81993524 - L1PA13 LINE L1 -4907 1890 1180 1023 297 58 52 chr17 7511008 7511530 -81993023 - L1PA13 LINE L1 -5818 969 445 * 796 203 0 7 chr17 7511527 7511680 -81992873 - L1PA13 LINE L1 -6632 155 4 * 1370 228 69 64 chr17 7511777 7512359 -81992194 + LTR24B LTR ERV1 1 635 0 1128 262 46 40 chr17 7512359 7512959 -81991594 + LTR24B-int LTR ERV1 2 745 -4378 180 179 0 0 chr17 7513268 7513307 -81991246 + CT-rich Low_complexity Low_complexity 5 43 0 332 330 11 34 chr17 7513973 7514149 -81990404 + MER89-int LTR ERV1 3480 3651 -3440 1786 144 17 10 chr17 7514237 7514535 -81990018 - AluJo SINE Alu -12 300 1 328 277 43 11 chr17 7514605 7514699 -81989854 + MER89-int LTR ERV1 2538 2634 -4167 2491 4 0 15 chr17 7514866 7515140 -81989413 + AluYb8 SINE Alu 20 289 -29 2054 96 0 31 chr17 7515383 7515674 -81988879 + AluSq SINE Alu 1 282 -31 180 0 0 0 chr17 7515675 7515695 -81988858 + (TGAA)n Simple_repeat Simple_repeat 3 22 0 205 182 0 0 chr17 7516386 7516419 -81988134 + polypurine Low_complexity Low_complexity 1 33 0 474 118 0 0 chr17 7516842 7516910 -81987643 + LTR24B LTR ERV1 501 568 -8 2333 92 0 3 chr17 7517127 7517422 -81987131 - AluSc SINE Alu -15 294 1 3733 199 106 15 chr17 7517422 7518229 -81986324 - L1MC2 LINE L1 -13 6331 5428 1693 167 23 13 chr17 7518229 7518535 -81986018 - AluJb SINE Alu -3 309 1 3733 199 106 15 chr17 7518535 7518651 -81985902 - L1MC2 LINE L1 -916 5428 5324 2380 92 0 0 chr17 7518651 7518956 -81985597 - AluSx SINE Alu -7 305 1 1069 125 60 50 chr17 7518981 7519181 -81985372 - L1MB2 LINE L1 -2 6169 5968 840 172 27 59 chr17 7519181 7519367 -81985186 - LTR57 LTR ERVL 0 411 232 2374 71 0 7 chr17 7519411 7519706 -81984847 - AluY SINE Alu -18 293 1 1006 92 48 121 chr17 7519772 7519979 -81984574 - L1MA2 LINE L1 -18 6286 6095 2489 65 0 10 chr17 7519992 7520301 -81984252 - AluY SINE Alu -5 306 1 1409 129 37 0 chr17 7520301 7520518 -81984035 - LTR57 LTR ERVL -186 225 1 2423 106 0 0 chr17 7522101 7522413 -81982140 + AluSx SINE Alu 1 312 0 221 305 98 12 chr17 7522782 7522864 -81981689 + L2 LINE L2 3141 3229 -43 404 72 9 0 chr17 7522902 7522968 -81981585 - MER51A LTR ERV1 -308 69 1 249 278 130 17 chr17 7523000 7523115 -81981438 + L1M4 LINE L1 4902 5029 -1117 25 31 0 0 chr17 7523303 7523335 -81981218 + AT_rich Low_complexity Low_complexity 1 32 0 1513 108 33 21 chr17 7523532 7523879 -81980674 + LTR46 LTR ERV1 1 404 -56 354 23 0 0 chr17 7523883 7523926 -81980627 + (TC)n Simple_repeat Simple_repeat 2 44 0 2366 94 3 0 chr17 7523929 7524236 -81980317 - AluSp SINE Alu -5 308 1 564 82 0 0 chr17 7524245 7524317 -81980236 - MER4E LTR ERV1 -282 497 426 1914 148 26 58 chr17 7524317 7524695 -81979858 + MER66B LTR ERV1 1 366 -120 1630 112 13 0 chr17 7524701 7524925 -81979628 + AluSg/x SINE Alu 76 302 -8 1681 171 27 0 chr17 7524932 7525224 -81979329 + MER4D LTR ERV1 604 903 0 337 123 62 0 chr17 7525629 7525694 -81978859 + L1MC2 LINE L1 6267 6335 -9 8268 21 0 0 chr17 7526127 7527534 -81977019 + L1PA3 LINE L1 4752 6155 0 24 32 0 0 chr17 7527934 7527965 -81976588 + AT_rich Low_complexity Low_complexity 1 31 0 1336 189 80 121 chr17 7528605 7528677 -81975876 - MSTD LTR MaLR 0 396 323 2229 92 3 0 chr17 7528677 7528959 -81975594 + AluY SINE Alu 2 284 -27 1336 189 80 121 chr17 7528959 7529299 -81975254 - MSTD LTR MaLR -73 323 1 21 36 0 0 chr17 7529987 7530015 -81974538 + AT_rich Low_complexity Low_complexity 1 28 0 1509 159 90 34 chr17 7530164 7530594 -81973959 + LTR54 LTR ERV1 1 493 -5 229 177 106 99 chr17 7530700 7530841 -81973712 - L1ME4a LINE L1 -2 6119 5978 1175 276 43 57 chr17 7530993 7531486 -81973067 - LTR33A LTR ERVL 0 523 38 806 199 17 6 chr17 7531532 7531708 -81972845 + L1MC4 LINE L1 7438 7615 -427 595 138 0 47 chr17 7531717 7531963 -81972590 + AluJ SINE Alu 11 294 -18 1090 256 73 42 chr17 7531964 7532348 -81972205 + L1MC4 LINE L1 7620 8019 -23 2066 127 0 3 chr17 7532348 7532640 -81971913 - AluSg SINE Alu -17 293 3 1090 256 73 42 chr17 7532640 7532665 -81971888 + L1MC4 LINE L1 8019 8042 0 631 270 90 69 chr17 7532880 7533115 -81971438 + MLT1H LTR MaLR 1 230 -365 5794 45 1 1 chr17 7533115 7533781 -81970772 + L1PA7 LINE L1 5483 6148 -6 631 270 90 69 chr17 7533781 7534004 -81970549 + MLT1H LTR MaLR 230 447 -148 2446 42 19 13 chr17 7534004 7534313 -81970240 - AluY SINE Alu 0 311 1 631 270 90 69 chr17 7534313 7534356 -81970197 + MLT1H LTR MaLR 447 488 -107 2420 138 14 6 chr17 7534356 7534719 -81969834 + MER47A DNA MER2_type 1 366 0 631 270 90 69 chr17 7534719 7534736 -81969817 + MLT1H LTR MaLR 488 588 -7 1731 161 22 75 chr17 7534860 7535276 -81969277 - L1 LINE L1 -831 6734 6341 * 8231 195 38 118 chr17 7535267 7535471 -81969082 - L1 LINE L1 -1433 6132 5913 2585 192 16 43 chr17 7535471 7535728 -81968825 - MER70A LTR ERVL 0 472 233 1886 122 79 0 chr17 7535728 7536007 -81968546 - AluSg SINE Alu -9 301 1 2585 192 16 43 chr17 7536007 7536234 -81968319 - MER70A LTR ERVL -239 233 1 8231 195 38 118 chr17 7536234 7537702 -81966851 - L1 LINE L1 -1652 5913 4329 189 0 0 0 chr17 7537702 7537723 -81966830 + (TTTG)n Simple_repeat Simple_repeat 4 24 0 8231 195 38 118 chr17 7537723 7538376 -81966177 - L1 LINE L1 -3236 4329 3625 2242 90 0 0 chr17 7538376 7538675 -81965878 + AluSg1 SINE Alu 1 299 -10 8231 195 38 118 chr17 7538675 7539663 -81964890 - L1 LINE L1 -3940 3625 2719 270 0 0 0 chr17 7539665 7539695 -81964858 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 7341 11 2 0 chr17 7539695 7540511 -81964042 - L1PA3 LINE L1 -10 6145 5328 496 213 25 0 chr17 7540484 7540606 -81963947 - L1M3c LINE L1 -4555 1586 1462 * 560 306 117 20 chr17 7540711 7540959 -81963594 - L1M3c LINE L1 -5546 595 324 1564 250 32 5 chr17 7541033 7541409 -81963144 - L1M3c LINE L1 -5755 386 1 212 404 14 28 chr17 7541409 7541627 -81962926 - L2 LINE L2 -249 3023 2809 300 297 50 30 chr17 7541883 7541984 -81962569 - L2 LINE L2 -4 3309 3207 487 212 63 112 chr17 7542007 7542248 -81962305 - L1MC5 LINE L1 -126 7916 7665 1824 115 7 7 chr17 7542248 7542527 -81962026 + AluSx SINE Alu 1 279 -33 279 54 0 0 chr17 7542527 7542564 -81961989 + (CAAT)n Simple_repeat Simple_repeat 3 39 0 487 212 63 112 chr17 7542564 7542660 -81961893 - L1MC5 LINE L1 -375 7667 7505 663 249 39 11 chr17 7542783 7542964 -81961589 - L1ME2 LINE L1 -158 6006 5821 1371 104 0 0 chr17 7542981 7543163 -81961390 + AluSg SINE Alu 1 182 -128 2074 97 3 23 chr17 7543171 7543480 -81961073 + AluSx SINE Alu 1 303 -9 277 83 21 0 chr17 7543480 7543528 -81961025 + L1PA16 LINE L1 6118 6166 0 1975 120 0 10 chr17 7543543 7543869 -81960684 + AluSx SINE Alu 5 312 0 370 345 117 19 chr17 7544449 7544655 -81959898 + L1ME LINE L1 598 823 -5573 382 234 301 13 chr17 7544684 7545059 -81959494 + L1ME LINE L1 776 1205 -5201 4133 243 52 37 chr17 7545080 7547407 -81957146 + L1PBa LINE L1 3 1644 -5219 1577 162 2 29 chr17 7547404 7547691 -81956862 + L1PB3 LINE L1 5889 6161 -5 * 1363 262 52 15 chr17 7547696 7548158 -81956395 + L1ME LINE L1 1217 1695 -4711 6094 78 29 19 chr17 7548158 7549062 -81955491 + L1PB1 LINE L1 5237 6148 -3 1376 194 9 34 chr17 7549072 7549422 -81955131 + L1ME LINE L1 1691 2031 -4375 180 0 0 0 chr17 7549659 7549679 -81954874 + (CA)n Simple_repeat Simple_repeat 2 21 0 187 380 105 37 chr17 7549803 7550127 -81954426 + L2 LINE L2 2872 3217 -55 487 231 46 0 chr17 7550154 7550262 -81954291 - L2 LINE L2 -2 3311 3199 183 304 0 0 chr17 7550272 7550318 -81954235 + L2 LINE L2 3219 3264 -8 356 255 114 135 chr17 7550850 7551183 -81953370 + L2 LINE L2 2943 3268 -4 1540 168 0 31 chr17 7551655 7551941 -81952612 + AluJo SINE Alu 6 282 -30 262 268 18 116 chr17 7551962 7552074 -81952479 - L2 LINE L2 -14 3258 3158 270 0 0 0 chr17 7552192 7552222 -81952331 + (TG)n Simple_repeat Simple_repeat 1 30 0 751 149 9 0 chr17 7552223 7552337 -81952216 - FLAM_C SINE Alu -28 115 1 2147 104 7 10 chr17 7553180 7553315 -81951238 + AluSx SINE Alu 1 135 -177 2249 95 0 7 chr17 7553315 7553621 -81950932 + AluSg SINE Alu 1 304 -6 2147 104 7 10 chr17 7553621 7553794 -81950759 + AluSx SINE Alu 135 308 -4 2214 76 0 3 chr17 7554450 7554741 -81949812 - AluY SINE Alu -21 290 1 336 67 0 0 chr17 7554822 7554867 -81949686 - MADE1 DNA Mariner -35 45 1 2769 219 73 54 chr17 7555610 7556291 -81948262 - HAL1 LINE L1 -604 1903 1196 2481 55 0 7 chr17 7556291 7556600 -81947953 - AluY SINE Alu -4 307 1 2769 219 73 54 chr17 7556600 7556914 -81947639 - HAL1 LINE L1 -1311 1196 889 2620 146 34 0 chr17 7557033 7557451 -81947102 + MSTB1 LTR MaLR 1 432 0 389 287 0 10 chr17 7557452 7557553 -81947000 + MIR SINE MIR 101 200 -62 1120 272 85 19 chr17 7557690 7558077 -81946476 + MLT1K LTR MaLR 108 588 0 851 295 16 28 chr17 7558173 7558536 -81946017 - L1ME LINE L1 -343 5778 5420 220 277 48 48 chr17 7558696 7558779 -81945774 + MIR SINE MIR 25 107 -101 379 248 48 0 chr17 7558960 7559085 -81945468 + L1ME1 LINE L1 6035 6165 -1 1382 76 0 0 chr17 7559091 7559263 -81945290 + AluY SINE Alu 1 172 -139 1729 192 124 28 chr17 7559366 7559628 -81944925 - L1MDa LINE L1 -4791 1749 1514 195 42 0 0 chr17 7559628 7559652 -81944901 + (TTTTA)n Simple_repeat Simple_repeat 2 25 0 1729 192 124 28 chr17 7559652 7559890 -81944663 - L1MDa LINE L1 -5026 1514 1201 2049 136 0 7 chr17 7559891 7560200 -81944353 - AluSx SINE Alu -5 307 1 1912 240 27 27 chr17 7560219 7560665 -81943888 - L1MDa LINE L1 -6061 479 34 2424 169 62 102 chr17 7560666 7561489 -81943064 - L1ME1 LINE L1 -341 5825 5065 1963 88 0 4 chr17 7561489 7561750 -81942803 + AluSg SINE Alu 37 296 -14 2424 169 62 102 chr17 7561750 7562107 -81942446 - L1ME1 LINE L1 -1101 5065 4695 611 217 35 0 chr17 7562208 7562323 -81942230 - MER44D DNA MER2_type -220 389 1 407 225 75 116 chr17 7562331 7562470 -81942083 - HAL1 LINE L1 -2223 284 162 2291 89 3 3 chr17 7562470 7562783 -81941770 - AluSp SINE Alu 0 313 1 407 225 75 116 chr17 7562783 7562936 -81941617 - HAL1 LINE L1 -2345 162 4 329 278 95 65 chr17 7562910 7563178 -81941375 - L1MEd LINE L1 -4901 1235 945 * 2370 64 3 0 chr17 7563178 7563474 -81941079 - AluY SINE Alu -14 297 1 329 278 95 65 chr17 7563474 7563680 -81940873 - L1MEd LINE L1 -5191 945 747 26 30 0 0 chr17 7563826 7563859 -81940694 + AT_rich Low_complexity Low_complexity 1 33 0 461 104 0 0 chr17 7563860 7563927 -81940626 - L1PA10 LINE L1 -13 6155 6089 4451 91 15 7 chr17 7563927 7564540 -81940013 + L1PA10 LINE L1 5459 6076 -92 2256 73 7 3 chr17 7564541 7564844 -81939709 - AluY SINE Alu -7 304 1 993 197 126 74 chr17 7565077 7565426 -81939127 - MER66A LTR ERV1 -40 438 66 2129 113 7 0 chr17 7565426 7565736 -81938817 - AluSx SINE Alu 0 312 1 993 197 126 74 chr17 7565736 7565776 -81938777 - MER66A LTR ERV1 -412 66 29 25 0 0 0 chr17 7565854 7565879 -81938674 + AT_rich Low_complexity Low_complexity 1 25 0 1926 148 3 3 chr17 7565972 7566282 -81938271 - AluJo SINE Alu -2 310 1 276 232 0 29 chr17 7566529 7566598 -81937955 - MIR SINE MIR -8 254 188 1152 225 47 69 chr17 7566820 7567215 -81937338 + MLT1K LTR MaLR 165 586 -29 2027 123 3 7 chr17 7567245 7567554 -81936999 - AluSq SINE Alu 0 313 6 254 246 29 0 chr17 7567561 7567630 -81936923 + MLT1K LTR MaLR 514 584 -4 2295 77 3 22 chr17 7567814 7568125 -81936428 - AluSp SINE Alu -8 305 1 284 0 28 0 chr17 7568379 7568415 -81936138 + (TTA)n Simple_repeat Simple_repeat 3 39 0 2354 152 44 12 chr17 7568467 7568875 -81935678 - MSTB LTR MaLR -4 422 2 2258 89 0 0 chr17 7569035 7569326 -81935227 - AluSx SINE Alu -21 291 1 424 110 0 0 chr17 7569648 7569721 -81934832 - L1MC3 LINE L1 -1 7784 7712 1881 82 74 0 chr17 7570407 7570677 -81933876 - AluSx SINE Alu -22 290 1 800 278 133 44 chr17 7570679 7571121 -81933432 - HAL1 LINE L1 -1656 851 357 2131 110 0 3 chr17 7571121 7571429 -81933124 - AluSq SINE Alu -6 307 1 800 278 133 44 chr17 7571429 7571489 -81933064 - HAL1 LINE L1 -2150 357 304 331 165 44 77 chr17 7571501 7571592 -81932961 - Tigger7 DNA MER2_type 0 2491 2404 475 171 0 0 chr17 7571729 7571799 -81932754 - AluJ/FLAM SINE Alu -240 72 3 216 0 0 0 chr17 7571812 7571836 -81932717 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 1736 98 0 0 chr17 7571836 7572072 -81932481 - AluSx SINE Alu -32 280 45 5352 103 31 16 chr17 7572076 7572472 -81932081 - Tigger1 DNA MER2_type -948 1470 1081 2151 114 0 0 chr17 7572472 7572771 -81931782 - AluSg SINE Alu -10 300 2 5352 103 31 16 chr17 7572771 7573187 -81931366 - Tigger1 DNA MER2_type -1337 1081 646 1269 108 15 0 chr17 7573187 7573382 -81931171 - AluSc SINE Alu -13 296 99 534 161 0 76 chr17 7573493 7573611 -81930942 + AluJo SINE Alu 112 220 -92 225 167 136 0 chr17 7573653 7573719 -81930834 + MIR SINE MIR 127 201 -61 267 31 0 0 chr17 7573743 7573775 -81930778 + (CA)n Simple_repeat Simple_repeat 1 32 0 601 212 8 0 chr17 7574212 7574353 -81930200 + FLAM_A SINE Alu 1 142 0 902 169 17 11 chr17 7574398 7574576 -81929977 - MER96B DNA MER1_type? -237 180 2 2193 117 0 0 chr17 7575053 7575362 -81929191 + AluSx SINE Alu 1 309 -3 373 359 57 31 chr17 7575426 7575744 -81928809 + L2 LINE L2 1217 1542 -1772 625 184 58 89 chr17 7575744 7575793 -81928760 - MER106A DNA MER1_type -3 233 184 2229 95 3 7 chr17 7575793 7576099 -81928454 - AluSp SINE Alu -8 305 1 625 184 58 89 chr17 7576099 7576239 -81928314 - MER106A DNA MER1_type -52 184 50 665 149 0 0 chr17 7576249 7576343 -81928210 + 5S rRNA rRNA 1 94 -27 1119 149 86 0 chr17 7576730 7576951 -81927602 - L1MA9 LINE L1 0 6312 6073 1200 206 26 90 chr17 7576951 7577020 -81927533 + MSTB2 LTR MaLR 7 79 -378 1870 142 7 3 chr17 7577020 7577322 -81927231 + AluJb SINE Alu 9 311 -1 1200 206 26 90 chr17 7577322 7577597 -81926956 + MSTB2 LTR MaLR 79 329 -128 2168 88 3 3 chr17 7577698 7577994 -81926559 - AluSq SINE Alu -17 296 1 1386 157 52 21 chr17 7578281 7578294 -81926259 - AluJb SINE Alu -17 295 284 459 63 0 0 chr17 7578294 7578357 -81926196 + (TATG)n Simple_repeat Simple_repeat 2 64 0 1386 157 52 21 chr17 7578357 7578629 -81925924 - AluJb SINE Alu -28 284 1 288 345 54 20 chr17 7578951 7579176 -81925377 + L2 LINE L2 2745 2969 -303 1028 189 4 88 chr17 7579587 7579652 -81924901 + MIR SINE MIR 6 75 -187 3934 180 40 48 chr17 7579652 7580614 -81923939 - LTR13 LTR ERVK 0 954 1 1028 189 4 88 chr17 7580614 7580786 -81923767 + MIR SINE MIR 75 223 -39 1821 151 0 19 chr17 7580823 7581135 -81923418 - AluSx SINE Alu -6 306 1 880 125 21 0 chr17 7581431 7581575 -81922978 + AluSp/q SINE Alu 163 309 -4 1125 92 12 0 chr17 7581575 7581738 -81922815 + Tigger1 DNA MER2_type 1584 1748 -670 1764 101 0 0 chr17 7581738 7581975 -81922578 + AluSq SINE Alu 1 237 -76 1913 126 0 26 chr17 7582246 7582555 -81921998 + AluJb SINE Alu 1 301 -11 2155 104 0 7 chr17 7582592 7582890 -81921663 + AluSx SINE Alu 1 296 -16 249 224 13 40 chr17 7582892 7582968 -81921585 + MER67C LTR ERV1 28 101 -609 2156 140 25 6 chr17 7583068 7583082 -81921471 + MER67C LTR ERV1 347 359 -351 2252 104 0 0 chr17 7583082 7583379 -81921174 + AluSx SINE Alu 1 297 -15 2156 140 25 6 chr17 7583379 7583721 -81920832 + MER67C LTR ERV1 359 710 0 210 282 84 0 chr17 7583883 7583954 -81920599 - MIR SINE MIR -1 261 185 207 0 0 0 chr17 7584344 7584367 -81920186 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 2377 69 0 10 chr17 7587133 7587437 -81917116 - AluY SINE Alu -10 301 1 203 208 19 38 chr17 7588192 7588245 -81916308 + C-rich Low_complexity Low_complexity 2 53 0 225 310 129 9 chr17 7589664 7589780 -81914773 + MIR3 SINE MIR 36 165 -43 981 216 16 0 chr17 7590277 7590462 -81914091 - MER5A DNA MER1_type 0 189 2 1948 152 0 13 chr17 7590526 7590828 -81913725 - AluSx SINE Alu -14 298 1 180 361 46 37 chr17 7591055 7591163 -81913390 + L2 LINE L2 3184 3292 -21 843 174 0 0 chr17 7592084 7592216 -81912337 + FLAM_C SINE Alu 2 133 0 1755 182 0 3 chr17 7593010 7593306 -81911247 - AluJo SINE Alu -17 295 1 449 334 87 63 chr17 7593613 7594107 -81910446 - L1M4 LINE L1 -2640 3506 3001 * 455 349 66 52 chr17 7593656 7594151 -81910402 + L1M4c LINE L1 903 1970 -4 380 326 60 22 chr17 7594481 7594665 -81909888 - MIR SINE MIR -44 218 28 2193 73 0 0 chr17 7595051 7595326 -81909227 - AluSg SINE Alu -4 306 32 21 0 0 0 chr17 7595633 7595654 -81908899 + GC_rich Low_complexity Low_complexity 1 21 0 1344 207 74 45 chr17 7597150 7597183 -81907370 - MLT1A1 LTR MaLR -2 363 332 2388 73 3 0 chr17 7597183 7597483 -81907070 + AluSg SINE Alu 1 301 -9 1344 207 74 45 chr17 7597483 7597802 -81906751 - MLT1A1 LTR MaLR -33 332 1 321 339 54 0 chr17 7597920 7598032 -81906521 + MIR SINE MIR 30 147 -61 743 299 132 16 chr17 7598034 7598073 -81906480 - L1MEd LINE L1 -1306 1184 1151 1935 109 8 0 chr17 7598073 7598338 -81906215 + AluSx SINE Alu 29 295 -17 743 299 132 16 chr17 7598338 7598626 -81905927 - L1MEd LINE L1 -1339 1151 827 1023 124 103 5 chr17 7598635 7598829 -81905724 - AluSg/x SINE Alu -15 297 85 455 89 0 0 chr17 7598948 7599004 -81905549 - AluJ/FLAM SINE Alu -247 65 10 2379 64 0 0 chr17 7599024 7599320 -81905233 - AluY SINE Alu -15 296 1 324 274 234 11 chr17 7599402 7599577 -81904976 - MIR SINE MIR 0 262 49 855 220 117 47 chr17 7600534 7600834 -81903719 - MER58B DNA MER1_type -2 339 19 1732 126 15 4 chr17 7601414 7601683 -81902870 - AluSx SINE Alu 0 312 41 1825 54 0 0 chr17 7602882 7603105 -81901448 + AluSg/x SINE Alu 77 299 -13 647 246 110 18 chr17 7603845 7604073 -81900480 + MIR SINE MIR 14 262 0 26 101 0 0 chr17 7604916 7605005 -81899548 + GC_rich Low_complexity Low_complexity 1 89 0 297 0 0 0 chr17 7614664 7614697 -81889856 + (CAG)n Simple_repeat Simple_repeat 1 33 0 760 212 53 6 chr17 7615250 7615420 -81889133 + MER5B DNA MER1_type 1 178 0 1192 173 0 20 chr17 7615518 7615720 -81888833 + AluJo SINE Alu 1 198 -114 237 289 56 22 chr17 7619865 7619955 -81884598 + MIR3 SINE MIR 106 198 -10 1765 183 112 23 chr17 7619955 7620250 -81884303 - MSTC LTR MaLR 0 428 88 2293 78 7 7 chr17 7620250 7620546 -81884007 - AluY SINE Alu -15 296 1 1765 183 112 23 chr17 7620546 7620643 -81883910 - MSTC LTR MaLR -340 88 1 5379 206 92 106 chr17 7620643 7620933 -81883620 - MSTC-int LTR MaLR 0 1735 1442 2257 82 7 0 chr17 7620933 7621227 -81883326 - AluSg SINE Alu -14 296 1 5379 206 92 106 chr17 7621227 7621828 -81882725 - MSTC-int LTR MaLR -293 1442 834 333 0 0 0 chr17 7621828 7621865 -81882688 + (CA)n Simple_repeat Simple_repeat 2 38 0 5379 206 92 106 chr17 7621865 7622504 -81882049 - MSTC-int LTR MaLR -901 834 230 2326 79 3 0 chr17 7622504 7622808 -81881745 - AluSg SINE Alu -5 305 1 5379 206 92 106 chr17 7622808 7623034 -81881519 - MSTC-int LTR MaLR -1505 230 2 856 155 83 26 chr17 7623044 7623237 -81881316 - MSTC LTR MaLR -4 424 221 265 140 0 53 chr17 7623383 7623440 -81881113 - MSTC LTR MaLR -250 178 125 586 152 120 32 chr17 7623440 7623598 -81880955 - MSTC LTR MaLR -256 172 1 2227 109 0 6 chr17 7623673 7623986 -81880567 + AluSq SINE Alu 1 311 -2 467 329 52 36 chr17 7624065 7624256 -81880297 - MIR SINE MIR -6 256 58 2142 95 0 0 chr17 7624256 7624570 -81879983 + AluSx SINE Alu 1 314 0 467 329 52 36 chr17 7624570 7624626 -81879927 - MIR SINE MIR -204 58 4 2471 43 27 0 chr17 7626821 7627122 -81877431 + AluSg SINE Alu 1 309 -1 2519 53 0 0 chr17 7627205 7627507 -81877046 + AluY SINE Alu 1 302 -9 277 241 196 38 chr17 7627524 7627657 -81876896 - MIR SINE MIR -93 169 16 * 455 319 80 5 chr17 7627638 7627826 -81876727 - MIR SINE MIR -38 224 23 347 294 39 10 chr17 7628690 7628792 -81875761 + MER91C DNA MER1_type 36 140 0 1327 39 0 0 chr17 7629084 7629239 -81875314 + AluY SINE Alu 147 301 -10 2087 80 0 104 chr17 7629921 7630259 -81874294 - AluSg SINE Alu -7 303 1 2342 97 0 0 chr17 7630666 7630976 -81873577 + AluSg SINE Alu 1 310 0 1996 92 14 11 chr17 7634123 7634449 -81870104 + AluSx SINE Alu 1 327 0 639 243 26 30 chr17 7634589 7634856 -81869697 - LTR13 LTR ERVK -741 266 1 777 157 6 81 chr17 7634856 7635028 -81869525 + MIR SINE MIR 65 223 -39 2053 140 0 9 chr17 7635062 7635377 -81869176 - AluSx SINE Alu 0 312 1 2359 81 3 0 chr17 7635684 7635991 -81868562 + AluSp SINE Alu 1 308 -5 814 296 42 61 chr17 7636024 7636524 -81868029 - L2 LINE L2 0 3272 2778 2366 70 0 0 chr17 7636711 7637051 -81867502 - AluY SINE Alu 0 311 1 185 158 0 53 chr17 7637359 7637397 -81867156 - L3 LINE CR1 -656 921 886 2370 86 3 0 chr17 7637617 7637908 -81866645 - AluSp SINE Alu -21 292 1 1412 122 0 0 chr17 7638416 7638605 -81865948 - AluSg/x SINE Alu -1 311 123 2368 84 0 0 chr17 7638846 7639157 -81865396 - AluSx SINE Alu 0 311 1 407 314 0 0 chr17 7639216 7639337 -81865216 - LTR67 LTR ERVL -8 549 429 226 266 0 16 chr17 7639505 7639569 -81864984 - LTR67 LTR ERVL -386 171 109 254 215 94 111 chr17 7639681 7639832 -81864721 - L1M4 LINE L1 -2976 3170 3024 1588 110 0 5 chr17 7639832 7640069 -81864484 + AluSq SINE Alu 78 313 0 254 215 94 111 chr17 7640069 7640214 -81864339 - L1M4 LINE L1 -3122 3024 2878 2304 95 0 3 chr17 7640621 7640915 -81863638 + AluSx SINE Alu 2 294 -18 242 280 53 27 chr17 7640983 7641058 -81863495 - MIR SINE MIR -137 125 49 494 122 52 17 chr17 7642346 7642518 -81862035 + (CA)n Simple_repeat Simple_repeat 2 179 0 295 279 132 25 chr17 7642679 7642876 -81861677 + L1MC5 LINE L1 7268 7485 -476 2170 119 24 3 chr17 7642882 7643177 -81861376 + AluJb SINE Alu 1 301 -11 264 204 28 36 chr17 7643193 7643317 -81861236 + L1M LINE L1 5222 5347 -810 2393 82 0 7 chr17 7643536 7643840 -81860713 - AluSx SINE Alu -10 302 1 562 231 22 22 chr17 7644208 7644390 -81860163 - LTR16C LTR ERVL 0 491 310 226 276 23 35 chr17 7644470 7644557 -81859996 - LTR16C LTR ERVL -310 181 96 375 285 81 63 chr17 7644731 7644817 -81859736 + L1M4 LINE L1 4387 4470 -1676 2489 43 26 10 chr17 7644817 7645121 -81859432 + AluY SINE Alu 1 309 -2 375 285 81 63 chr17 7645121 7645385 -81859168 + L1M4 LINE L1 4470 4749 -1397 4014 193 34 51 chr17 7645385 7646371 -81858182 - LTR5 LTR ERVK 0 969 1 375 285 81 63 chr17 7646371 7646461 -81858092 + L1M4 LINE L1 4749 4836 -1310 2494 83 3 3 chr17 7646560 7646873 -81857680 + AluSp SINE Alu 1 313 0 2996 115 0 58 chr17 7646873 7646986 -81857567 + L1PB3 LINE L1 5677 5795 -359 2326 117 3 0 chr17 7646986 7647293 -81857260 + AluSx SINE Alu 5 312 0 2996 115 0 58 chr17 7647293 7647683 -81856870 + L1PB3 LINE L1 5795 6151 -3 2570 63 0 0 chr17 7647911 7648211 -81856342 - AluSc SINE Alu -9 300 1 395 106 15 0 chr17 7648751 7648817 -81855736 + (TC)n Simple_repeat Simple_repeat 2 68 0 2392 87 7 0 chr17 7649180 7649479 -81855074 - AluY SINE Alu -10 301 1 2282 112 0 0 chr17 7649545 7649848 -81854705 - AluSg SINE Alu -7 303 1 657 101 0 0 chr17 7650460 7650549 -81854004 - AluSg/x SINE Alu -9 303 215 2764 89 11 3 chr17 7650550 7650911 -81853642 + THE1B LTR MaLR 1 364 0 2943 105 85 0 chr17 7650911 7651369 -81853184 + THE1B-int LTR MaLR 1 497 -1083 2265 98 16 3 chr17 7651369 7651676 -81852877 + AluSp SINE Alu 1 311 -2 751 176 0 37 chr17 7651942 7652078 -81852475 + FLAM_C SINE Alu 1 131 -2 485 294 65 33 chr17 7652079 7652355 -81852198 + HAL1b LINE L1 224 508 -840 581 155 23 39 chr17 7652376 7652505 -81852048 - L1MC2 LINE L1 -338 6006 5880 1305 118 0 0 chr17 7652509 7652687 -81851866 - AluSp SINE Alu 0 313 136 3586 145 7 16 chr17 7652688 7653142 -81851411 - L1MC2 LINE L1 -453 5891 5441 1376 177 66 22 chr17 7653142 7653450 -81851103 - AluJb SINE Alu 0 320 1 3586 145 7 16 chr17 7653450 7653701 -81850852 - L1MC2 LINE L1 -903 5441 5189 405 282 118 0 chr17 7653706 7653876 -81850677 + HAL1b LINE L1 546 735 -613 1584 179 34 0 chr17 7653879 7654141 -81850412 + AluJb SINE Alu 1 271 -41 2436 98 3 9 chr17 7654216 7654531 -81850022 + AluSp SINE Alu 1 313 0 320 166 18 11 chr17 7654562 7654650 -81849903 + Alu SINE Alu 1 52 -248 771 274 39 4 chr17 7654748 7654978 -81849575 - ERVL LTR ERVL -636 5128 4891 1922 95 88 0 chr17 7655025 7655298 -81849255 + AluSg SINE Alu 1 297 -13 945 240 132 39 chr17 7655313 7655751 -81848802 - ERVL LTR ERVL -966 4798 4320 2526 44 0 13 chr17 7655884 7656182 -81848371 - AluY SINE Alu -17 294 1 2226 95 0 3 chr17 7657025 7657310 -81847243 + AluSg SINE Alu 3 286 -24 2462 78 3 7 chr17 7657594 7657903 -81846650 + AluSx SINE Alu 1 308 -4 1779 80 124 0 chr17 7658373 7658648 -81845905 - MER4A LTR ERV1 -14 650 342 828 90 42 102 chr17 7658646 7658789 -81845764 - MER4A LTR ERV1 -507 157 24 * 1913 112 12 68 chr17 7658789 7659112 -81845441 - AluSx SINE Alu -7 305 1 828 90 42 102 chr17 7659112 7659135 -81845418 - MER4A LTR ERV1 -640 24 1 180 75 150 25 chr17 7659192 7659232 -81845321 - L3 LINE CR1 -463 1114 1070 858 132 0 23 chr17 7659610 7659768 -81844785 - AluJo SINE Alu 0 311 157 2200 173 2 84 chr17 7659789 7660264 -81844289 + MER41B LTR ERV1 132 567 -68 2556 62 0 7 chr17 7660264 7660573 -81843980 - AluSg SINE Alu -3 307 1 2351 89 0 3 chr17 7660573 7660865 -81843688 - AluSx SINE Alu -7 305 15 280 150 12 113 chr17 7660870 7660950 -81843603 + MER66A LTR ERV1 395 466 -12 1011 130 13 7 chr17 7660958 7661112 -81843441 - AluJo SINE Alu -146 166 12 3005 162 23 92 chr17 7661272 7661393 -81843160 - LTR8 LTR ERV1 0 691 563 2227 100 0 7 chr17 7661393 7661684 -81842869 - AluSc SINE Alu -20 289 1 1347 170 83 104 chr17 7661684 7662144 -81842409 + LTR7 LTR ERV1 1 450 0 3005 162 23 92 chr17 7662144 7662763 -81841790 - LTR8 LTR ERV1 -126 565 1 865 88 0 0 chr17 7663400 7663513 -81841040 - AluSg/x SINE Alu -5 305 193 2397 151 32 114 chr17 7663663 7664093 -81840460 + LTR9 LTR ERV1 1 361 -251 2301 75 4 0 chr17 7664093 7664402 -81840151 + AluSq SINE Alu 5 314 0 2397 151 32 114 chr17 7664402 7664625 -81839928 + LTR9 LTR ERV1 361 601 -11 1832 192 16 39 chr17 7664962 7665343 -81839210 + MLT1A2 LTR MaLR 3 374 0 2536 66 3 0 chr17 7665960 7666263 -81838290 - AluSg SINE Alu -6 304 1 306 314 85 8 chr17 7666321 7666439 -81838114 + MIR SINE MIR 130 256 -6 2166 112 3 3 chr17 7667506 7667800 -81836753 - AluSx SINE Alu -18 294 1 2447 67 0 3 chr17 7668435 7668735 -81835818 + AluY SINE Alu 1 299 -12 24 32 0 0 chr17 7668737 7668768 -81835785 + AT_rich Low_complexity Low_complexity 1 31 0 739 263 19 0 chr17 7668809 7668969 -81835584 + MIR SINE MIR 2 164 -98 1281 158 72 66 chr17 7668992 7669053 -81835500 + MLT1A1 LTR MaLR 1 60 -305 2525 73 0 7 chr17 7669053 7669355 -81835198 + AluSp SINE Alu 1 300 -13 1281 158 72 66 chr17 7669355 7669597 -81834956 + MLT1A1 LTR MaLR 60 306 -59 594 210 73 0 chr17 7669599 7669723 -81834830 - FLAM_C SINE Alu -10 133 1 341 191 15 0 chr17 7669724 7669792 -81834761 + MLT1A1 LTR MaLR 297 365 0 262 217 9 113 chr17 7669810 7669870 -81834683 + MIR SINE MIR 147 193 -69 2744 13 0 3 chr17 7669870 7670168 -81834385 - AluY SINE Alu -14 297 1 262 217 9 113 chr17 7670168 7670213 -81834340 + MIR SINE MIR 193 241 -21 2098 125 0 19 chr17 7670226 7670538 -81834015 - AluSg SINE Alu -4 306 1 762 179 0 15 chr17 7670538 7670672 -81833881 - AluJo SINE Alu -178 134 3 679 159 80 55 chr17 7670672 7670835 -81833718 - MLT1A1 LTR MaLR -207 167 1 * 785 309 93 15 chr17 7670835 7671242 -81833311 - MLT1L LTR MaLR -80 535 97 2265 92 10 3 chr17 7671356 7671659 -81832894 - AluSq SINE Alu -8 305 1 2008 78 4 0 chr17 7672589 7672834 -81831719 + AluY SINE Alu 1 246 -65 837 98 0 0 chr17 7672934 7673046 -81831507 - AluSg SINE Alu -198 112 1 4393 150 25 27 chr17 7673234 7674019 -81830534 + LTR1 LTR ERV1 1 784 -1 2151 85 6 63 chr17 7674073 7674404 -81830149 + AluSx SINE Alu 1 312 0 222 281 11 67 chr17 7674983 7675072 -81829481 + L2 LINE L2 2279 2362 -952 2459 96 3 0 chr17 7675103 7675415 -81829138 - AluSq SINE Alu 0 313 1 2232 80 0 40 chr17 7675603 7675905 -81828648 - AluSq SINE Alu -19 294 5 456 296 127 30 chr17 7675922 7676260 -81828293 + L2 LINE L2 2543 2913 -401 2543 91 0 0 chr17 7676967 7677276 -81827277 - AluSc SINE Alu 0 309 1 225 0 0 0 chr17 7677363 7677388 -81827165 + (A)n Simple_repeat Simple_repeat 1 25 0 637 293 35 20 chr17 7677388 7677586 -81826967 - MIR SINE MIR -38 224 24 422 273 115 34 chr17 7677753 7677962 -81826591 - L2 LINE L2 -5 3308 3083 2292 103 0 3 chr17 7678343 7678643 -81825910 - AluSx SINE Alu -13 299 1 5403 40 0 2 chr17 7679529 7680172 -81824381 - L1PA4 LINE L1 -3 6152 5511 8341 52 4 8 chr17 7680319 7681330 -81823223 - LTR13 LTR ERVK 0 1007 1 2319 93 7 0 chr17 7681565 7681856 -81822697 - AluSx SINE Alu -8 304 12 2090 48 0 24 chr17 7682008 7682258 -81822295 - AluY SINE Alu -17 294 51 553 41 0 41 chr17 7682258 7682331 -81822222 - AluY SINE Alu -164 147 78 655 165 10 0 chr17 7682543 7682646 -81821907 - AluJb SINE Alu -13 299 196 2099 108 11 7 chr17 7682650 7682937 -81821616 - AluSx SINE Alu -24 288 1 1720 176 78 22 chr17 7683457 7683983 -81820570 - MLT2A2 LTR ERVL 0 554 1 2208 111 3 0 chr17 7684477 7684775 -81819778 + AluSx SINE Alu 1 299 -13 282 263 5 88 chr17 7684930 7685135 -81819418 - HAL1 LINE L1 -310 2197 2010 256 216 189 0 chr17 7685340 7685414 -81819139 + LOR1b LTR ERV1 3 90 -371 2275 104 0 0 chr17 7685432 7685731 -81818822 - AluY SINE Alu -12 299 1 2376 94 3 0 chr17 7685863 7686161 -81818392 - AluSp SINE Alu -12 301 3 972 288 54 25 chr17 7686389 7686833 -81817720 - HAL1 LINE L1 -833 1674 1218 2494 83 0 3 chr17 7687254 7687566 -81816987 + AluSq SINE Alu 1 311 -2 527 295 90 18 chr17 7687810 7688173 -81816380 + L1M2 LINE L1 5262 5648 -643 588 111 0 0 chr17 7688175 7688265 -81816288 + (TTCC)n Simple_repeat Simple_repeat 3 92 0 1054 149 12 6 chr17 7688273 7688441 -81816112 - FRAM SINE Alu -7 169 1 258 216 122 0 chr17 7688529 7688603 -81815950 + L1ME2 LINE L1 5729 5811 -1997 319 341 38 8 chr17 7688627 7688759 -81815794 + L1ME2 LINE L1 5811 5946 -218 1123 244 53 67 chr17 7688815 7689290 -81815263 - MLT1H LTR MaLR 0 549 82 2275 77 59 3 chr17 7689557 7689844 -81814709 + AluSq SINE Alu 1 303 -10 226 231 0 19 chr17 7690210 7690262 -81814291 - MER112 DNA MER1_type -6 254 204 307 247 148 0 chr17 7690342 7690423 -81814130 - L2 LINE L2 0 3313 3221 2478 78 7 0 chr17 7690828 7691137 -81813416 - AluSq SINE Alu -2 311 1 403 281 22 22 chr17 7691214 7691353 -81813200 + MIR SINE MIR 88 226 -36 207 171 0 0 chr17 7691668 7691703 -81812850 + GA-rich Low_complexity Low_complexity 2 36 0 241 120 53 13 chr17 7692396 7692471 -81812082 + (CCCCAG)n Simple_repeat Simple_repeat 6 83 0 438 159 40 23 chr17 7692899 7693075 -81811478 + (TG)n Simple_repeat Simple_repeat 2 180 0 663 116 56 0 chr17 7693094 7693432 -81811121 + (TG)n Simple_repeat Simple_repeat 1 357 0 1059 169 0 17 chr17 7693584 7693761 -81810792 - AluJo SINE Alu -55 257 84 238 343 40 0 chr17 7694084 7694183 -81810370 + L2 LINE L2 3146 3248 -24 425 246 217 11 chr17 7694448 7694623 -81809930 - L1MEc LINE L1 -5083 1313 1103 364 335 29 4 chr17 7694919 7695164 -81809389 - HAL1 LINE L1 -902 1605 1355 581 167 0 0 chr17 7695188 7695284 -81809269 + MSTB LTR MaLR 327 422 -4 4062 189 66 44 chr17 7695287 7696200 -81808353 - L1 LINE L1 -3752 3813 2921 1831 185 7 7 chr17 7696200 7696503 -81808050 + AluJb SINE Alu 2 304 -8 4062 189 66 44 chr17 7696503 7696659 -81807894 - L1 LINE L1 -4644 2921 2770 1622 138 120 22 chr17 7696659 7696934 -81807619 - AluSg SINE Alu -8 302 1 4062 189 66 44 chr17 7696934 7697242 -81807311 - L1 LINE L1 -4795 2770 2405 6538 222 16 7 chr17 7697268 7698596 -81805957 + L1PA13 LINE L1 1 1340 -5447 1595 219 20 122 chr17 7698597 7699195 -81805358 + L1ME1 LINE L1 5510 6046 -120 408 158 40 0 chr17 7699207 7699283 -81805270 + MLT1D LTR MaLR 28 106 -399 2218 102 7 3 chr17 7699292 7699595 -81804958 + AluSx SINE Alu 1 304 -8 1436 211 31 0 chr17 7699687 7699976 -81804577 + MLT2B3 LTR ERVL 210 507 -47 243 203 0 0 chr17 7699977 7700041 -81804512 + (TATATG)n Simple_repeat Simple_repeat 3 66 0 255 118 0 0 chr17 7700046 7700093 -81804460 + MLT2B3 LTR ERVL 459 544 -10 481 284 109 40 chr17 7700274 7700590 -81803963 + L1MDa LINE L1 2365 2700 -3840 1947 88 0 16 chr17 7700627 7700877 -81803676 + AluSc SINE Alu 1 246 -63 481 123 32 52 chr17 7700978 7701133 -81803420 + C-rich Low_complexity Low_complexity 1 152 0 1528 151 14 76 chr17 7701146 7701437 -81803116 - AluJb SINE Alu -39 273 1 1466 205 57 40 chr17 7701437 7701494 -81803059 - L1MEc LINE L1 -5279 1117 1062 2548 71 0 0 chr17 7701494 7701804 -81802749 - AluY SINE Alu -1 310 1 1466 205 57 40 chr17 7701804 7702170 -81802383 - L1MEc LINE L1 -5334 1062 687 879 303 8 11 chr17 7702170 7702434 -81802119 - L1MEc LINE L1 -6054 342 80 625 287 28 17 chr17 7702491 7702672 -81801881 - MIR SINE MIR -50 212 30 194 104 0 62 chr17 7703308 7703356 -81801197 + (TG)n Simple_repeat Simple_repeat 1 45 0 183 189 0 0 chr17 7703466 7703519 -81801034 + (TG)n Simple_repeat Simple_repeat 2 54 0 345 179 26 26 chr17 7705360 7705477 -81799076 + (TG)n Simple_repeat Simple_repeat 1 117 0 416 131 51 23 chr17 7705536 7705711 -81798842 + (TG)n Simple_repeat Simple_repeat 1 180 0 187 91 61 45 chr17 7705701 7705767 -81798786 + (GTGTG)n Simple_repeat Simple_repeat 4 70 0 * 2310 88 0 3 chr17 7706275 7706572 -81797981 - AluY SINE Alu -15 296 1 325 215 0 0 chr17 7706716 7706781 -81797772 + MER116 DNA Mariner 16 80 0 391 320 59 40 chr17 7706790 7707012 -81797541 - L1M4 LINE L1 -3675 2471 2246 384 277 0 21 chr17 7707015 7707109 -81797444 - MER5B DNA MER1_type -1 177 86 407 42 0 0 chr17 7707110 7707158 -81797395 + AluY SINE Alu 2 49 -269 1464 171 0 13 chr17 7707258 7707497 -81797056 - AluSx SINE Alu -67 245 10 2358 95 0 3 chr17 7707910 7708205 -81796348 - AluSg SINE Alu -16 294 1 2248 118 3 0 chr17 7708226 7708530 -81796023 - AluSx SINE Alu -7 305 1 2377 99 3 0 chr17 7708530 7708831 -81795722 - AluSp SINE Alu -8 305 3 1317 19 0 0 chr17 7708964 7709118 -81795435 + L1PA4 LINE L1 6001 6154 -1 218 350 95 7 chr17 7710400 7710537 -81794016 + MIR SINE MIR 109 257 -5 2904 113 210 70 chr17 7711807 7712967 -81791586 + pTR5 LTR ERV1 743 2468 0 2258 106 0 0 chr17 7713249 7713541 -81791012 - AluSx SINE Alu -20 292 1 333 259 49 105 chr17 7713938 7714100 -81790453 + L1MC/D LINE L1 3808 3960 -2186 803 269 86 20 chr17 7714101 7714402 -81790151 - MLT1J LTR MaLR -148 363 43 2141 121 0 58 chr17 7714442 7714772 -81789781 - AluSx SINE Alu -1 311 1 1790 134 6 75 chr17 7714774 7715109 -81789444 - AluJb SINE Alu 0 312 1 832 215 49 0 chr17 7715109 7715272 -81789281 + MER58B DNA MER1_type 171 341 0 247 263 20 30 chr17 7715331 7715430 -81789123 + L1MC/D LINE L1 4101 4198 -1948 434 319 67 51 chr17 7715561 7715617 -81788936 + L1MC/D LINE L1 4557 4611 -1535 2151 124 3 0 chr17 7715617 7715908 -81788645 - AluSx SINE Alu -20 292 1 434 319 67 51 chr17 7715908 7716366 -81788187 + L1MC/D LINE L1 4611 5082 -1064 2273 112 3 0 chr17 7716366 7716671 -81787882 - AluSc SINE Alu -3 306 1 434 319 67 51 chr17 7716671 7716768 -81787785 + L1MC/D LINE L1 5082 5176 -970 608 211 181 20 chr17 7716768 7717189 -81787364 - LTR33 LTR ERVL 0 521 1 330 316 115 64 chr17 7717219 7717493 -81787060 + L1MC/D LINE L1 5306 5565 -2243 2384 88 0 0 chr17 7717493 7717787 -81786766 + AluSg SINE Alu 1 294 -16 330 316 115 64 chr17 7717787 7717798 -81786755 + L1MC/D LINE L1 5565 5574 -2234 2184 117 0 39 chr17 7717798 7718107 -81786446 + AluSq SINE Alu 1 297 -16 330 316 115 64 chr17 7718107 7718256 -81786297 + L1MC/D LINE L1 5574 5763 -2045 1306 133 20 5 chr17 7718298 7718494 -81786059 + AluSp SINE Alu 20 218 -95 227 287 0 52 chr17 7718833 7718969 -81785584 - L1MC/D LINE L1 -1923 5885 5757 1461 218 3 40 chr17 7719151 7719454 -81785099 + AluJo SINE Alu 1 292 -20 302 298 35 28 chr17 7719591 7719732 -81784821 - HAL1 LINE L1 -85 2422 2281 536 327 53 43 chr17 7719760 7720063 -81784490 - HAL1 LINE L1 -312 2195 1890 578 193 91 30 chr17 7720074 7720271 -81784282 - MER69 DNA AcHobo -10 2516 2308 320 214 0 0 chr17 7720281 7720337 -81784216 - L1MC4 LINE L1 -1339 6703 6648 1454 145 0 0 chr17 7720338 7720538 -81784015 - AluJo SINE Alu -13 299 100 447 134 0 0 chr17 7720589 7720656 -81783897 - AluJ/FLAM SINE Alu -224 88 22 327 248 138 18 chr17 7720664 7720773 -81783780 + MER50 LTR ERV1 10 131 -603 2114 93 0 4 chr17 7720774 7721044 -81783509 - AluSg1 SINE Alu -40 269 1 3334 170 7 38 chr17 7721045 7721621 -81782932 - L1MD2 LINE L1 -465 6288 5732 2196 89 7 0 chr17 7721621 7721924 -81782629 - AluSx SINE Alu 0 307 3 3334 170 7 38 chr17 7721924 7722073 -81782480 - L1MD2 LINE L1 -1021 5732 5580 2382 98 0 0 chr17 7722374 7722680 -81781873 - AluSx SINE Alu -6 306 1 286 301 44 0 chr17 7723459 7723596 -81780957 - LTR16A1 LTR ERVL -10 481 305 363 252 50 8 chr17 7723669 7723788 -81780765 - LTR16C LTR ERVL -164 327 204 2357 74 20 0 chr17 7723886 7724185 -81780368 + AluY SINE Alu 1 305 -6 3359 234 18 32 chr17 7724310 7724837 -81779716 - L1MD2 LINE L1 -2138 4402 3869 1583 133 20 119 chr17 7724837 7725182 -81779371 - AluJb SINE Alu -1 311 1 3359 234 18 32 chr17 7725182 7725211 -81779342 - L1MD2 LINE L1 -2671 3869 3841 2146 90 11 4 chr17 7725211 7725530 -81779023 - AluY SINE Alu 0 321 1 3359 234 18 32 chr17 7725530 7725706 -81778847 - L1MD2 LINE L1 -2699 3841 3664 4230 170 40 51 chr17 7725706 7726670 -81777883 + LTR13 LTR ERVK 1 954 0 3359 234 18 32 chr17 7726670 7726966 -81777587 - L1MD2 LINE L1 -2876 3664 3385 2000 124 60 0 chr17 7726966 7727248 -81777305 + AluSx SINE Alu 1 299 -13 1094 222 52 73 chr17 7727248 7727451 -81777102 - L1MD2 LINE L1 -5027 1516 1310 1835 163 0 40 chr17 7727451 7727776 -81776777 - AluJb SINE Alu 0 312 1 1094 222 52 73 chr17 7727776 7728014 -81776539 - L1MD2 LINE L1 -5233 1310 1083 1720 112 123 8 chr17 7728014 7728290 -81776263 - AluSg1 SINE Alu 0 305 1 1094 222 52 73 chr17 7728290 7728342 -81776211 - L1MD2 LINE L1 -5460 1083 1031 942 133 29 46 chr17 7728360 7728533 -81776020 - LTR5 LTR ERVK 0 969 800 2263 54 18 4 chr17 7728535 7728849 -81775704 - AluY SINE Alu 0 318 1 4486 159 32 37 chr17 7728849 7729661 -81774892 - LTR5 LTR ERVK -161 808 1 325 288 8 8 chr17 7729665 7729783 -81774770 - L1MD2 LINE L1 -5511 1032 915 208 233 0 0 chr17 7730250 7730267 -81774286 + A-rich Low_complexity Low_complexity 4 20 -26 2378 94 7 0 chr17 7730267 7730574 -81773979 + AluSc SINE Alu 1 309 0 208 233 0 0 chr17 7730574 7730599 -81773954 + A-rich Low_complexity Low_complexity 19 46 0 307 394 49 39 chr17 7730664 7730948 -81773605 - L1MD2 LINE L1 -6234 306 20 1250 258 92 32 chr17 7730949 7731150 -81773403 + L1M4 LINE L1 2748 2935 -3211 2485 65 0 10 chr17 7731150 7731459 -81773094 + AluY SINE Alu 1 306 -5 1250 258 92 32 chr17 7731459 7731745 -81772808 + L1M4 LINE L1 2935 3202 -2944 1969 157 7 10 chr17 7731745 7731879 -81772674 + AluSx SINE Alu 1 134 -178 2387 57 47 0 chr17 7731879 7732175 -81772378 + AluY SINE Alu 1 310 -1 1969 157 7 10 chr17 7732175 7732340 -81772213 + AluSx SINE Alu 134 299 -13 1250 258 92 32 chr17 7732340 7732379 -81772174 + L1M4 LINE L1 3202 3237 -2909 2532 60 3 19 chr17 7732379 7732694 -81771859 + AluY SINE Alu 1 310 -1 1250 258 92 32 chr17 7732694 7732945 -81771608 + L1M4 LINE L1 3237 3574 -2572 284 155 357 0 chr17 7732939 7733068 -81771485 + L1M4 LINE L1 4878 5052 -1094 * 1210 176 14 5 chr17 7733068 7733278 -81771275 + AluJo SINE Alu 1 212 -100 250 306 72 0 chr17 7733285 7733396 -81771157 - L1M4 LINE L1 -1898 4248 4130 1175 246 81 48 chr17 7733887 7734427 -81770126 + L2 LINE L2 2473 3069 -244 2816 109 23 32 chr17 7734427 7734605 -81769948 + MSTA LTR MaLR 1 179 -249 2493 72 7 0 chr17 7734605 7734909 -81769644 - AluY SINE Alu -5 306 1 2816 109 23 32 chr17 7734909 7735162 -81769391 + MSTA LTR MaLR 179 428 0 1175 246 81 48 chr17 7735162 7735416 -81769137 + L2 LINE L2 3069 3313 0 3859 48 13 0 chr17 7735434 7735908 -81768645 + L1PA8 LINE L1 5691 6170 -2 248 294 22 0 chr17 7735946 7736038 -81768515 + L1MC4a LINE L1 4498 4591 -1555 261 333 152 0 chr17 7736246 7736411 -81768142 + LTR16A LTR ERVL 261 450 0 2186 103 33 0 chr17 7736463 7736765 -81767788 + AluSx SINE Alu 1 312 0 310 298 90 75 chr17 7736765 7736953 -81767600 + L1MC4a LINE L1 5719 5909 -1899 783 176 0 0 chr17 7738163 7738305 -81766248 + AluSp/q SINE Alu 172 313 0 1749 142 14 17 chr17 7738409 7738698 -81765855 - AluSx SINE Alu -21 291 4 258 398 6 0 chr17 7738708 7738869 -81765684 + (CCCCAA)n Simple_repeat Simple_repeat 2 163 0 223 369 23 17 chr17 7738948 7739124 -81765429 + (CCCCAA)n Simple_repeat Simple_repeat 1 177 0 221 209 76 51 chr17 7740700 7740858 -81763695 + (ATGGTG)n Simple_repeat Simple_repeat 3 164 0 567 311 47 0 chr17 7740861 7741073 -81763480 + MIR SINE MIR 12 233 -29 2232 83 6 10 chr17 7741493 7741805 -81762748 + AluSq SINE Alu 1 311 -2 524 231 125 25 chr17 7742416 7742576 -81761977 - MER5B DNA MER1_type -1 177 2 313 263 56 44 chr17 7743240 7743261 -81761292 - L1MA10 LINE L1 -2 6332 6312 647 243 30 82 chr17 7743261 7743528 -81761025 - L1ME2 LINE L1 -13 6151 5899 1360 227 101 55 chr17 7743799 7744324 -81760229 - MLT1H LTR MaLR 0 549 1 2169 90 3 3 chr17 7744352 7744652 -81759901 - AluSp SINE Alu -13 300 1 862 213 14 36 chr17 7744765 7744986 -81759567 - L2 LINE L2 -793 2521 2306 1757 161 11 0 chr17 7745131 7745410 -81759143 - AluJo SINE Alu -30 282 1 504 255 76 0 chr17 7745411 7745556 -81758997 - LTR33 LTR ERVL -40 481 326 272 324 11 45 chr17 7745948 7746124 -81758429 + (CCCCAG)n Simple_repeat Simple_repeat 4 173 0 244 370 6 6 chr17 7746184 7746346 -81758207 + (CCCCAA)n Simple_repeat Simple_repeat 4 165 0 1095 52 8 0 chr17 7746497 7746631 -81757922 + AluSq/x SINE Alu 1 135 -178 2217 101 3 3 chr17 7746632 7746940 -81757613 + AluSc SINE Alu 1 308 -1 807 248 140 12 chr17 7747074 7747409 -81757144 - MER115 DNA AcHobo -313 380 3 906 47 0 58 chr17 7747428 7747599 -81756954 + (TTTC)n Simple_repeat Simple_repeat 2 162 0 1994 95 29 0 chr17 7747601 7747874 -81756679 - AluSp SINE Alu -32 281 1 2368 146 57 5 chr17 7748752 7749157 -81755396 + MSTA LTR MaLR 1 426 -2 10087 164 20 4 chr17 7749160 7750779 -81753774 + MSTA-int LTR MaLR 7 1651 0 2405 125 62 34 chr17 7750779 7750966 -81753587 + MSTA LTR MaLR 1 181 -247 1951 138 0 3 chr17 7750966 7751262 -81753291 - AluSg SINE Alu -15 295 1 2405 125 62 34 chr17 7751262 7751490 -81753063 + MSTA LTR MaLR 181 428 0 532 337 25 10 chr17 7751627 7751826 -81752727 + MIR SINE MIR 32 233 -29 320 73 0 0 chr17 7753102 7753143 -81751410 + L1MA9 LINE L1 5910 5950 -362 2247 97 0 0 chr17 7753143 7753441 -81751112 + AluSg SINE Alu 1 298 -12 1037 72 0 0 chr17 7755225 7755363 -81749190 - AluSp/q SINE Alu -5 308 171 2051 108 0 7 chr17 7755365 7755661 -81748892 - AluSx SINE Alu -18 294 1 1125 169 23 27 chr17 7755745 7755964 -81748589 - AluJo SINE Alu -11 301 84 2321 67 7 0 chr17 7756271 7756570 -81747983 + AluSx SINE Alu 1 301 -11 930 159 62 40 chr17 7756660 7756836 -81747717 + MLT1C LTR MaLR 38 217 -250 1815 105 6 125 chr17 7756837 7757180 -81747373 + AluSx SINE Alu 1 302 0 2052 78 0 7 chr17 7758027 7758297 -81746256 - AluSc SINE Alu -41 268 1 425 252 130 61 chr17 7758467 7758729 -81745824 + MLT1J2 LTR MaLR 164 443 -7 316 317 56 21 chr17 7758908 7759050 -81745503 - L2 LINE L2 -1252 2062 1916 260 250 37 81 chr17 7759468 7759533 -81745020 - L1M LINE L1 -790 5390 5333 2089 107 0 20 chr17 7759533 7759832 -81744721 - AluSc SINE Alu -16 293 1 260 250 37 81 chr17 7759832 7759902 -81744651 - L1M LINE L1 -847 5333 5261 300 223 122 47 chr17 7759902 7760050 -81744503 - L1MEc LINE L1 -4807 1589 1431 237 347 42 21 chr17 7760747 7760842 -81743711 + MER91C DNA MER1_type 31 127 -13 2162 121 0 13 chr17 7761230 7761544 -81743009 + AluSq SINE Alu 2 311 -2 2202 100 3 0 chr17 7761663 7761963 -81742590 - AluSx SINE Alu -11 301 1 2022 43 90 14 chr17 7762087 7762365 -81742188 - AluY SINE Alu -12 299 1 294 256 44 80 chr17 7763035 7763114 -81741439 + MIR SINE MIR 103 176 -86 2055 109 3 3 chr17 7763114 7763407 -81741146 - AluSq SINE Alu -18 295 3 294 256 44 80 chr17 7763407 7763464 -81741089 + MIR SINE MIR 176 234 -28 1484 290 100 19 chr17 7766341 7767092 -81737461 + L2 LINE L2 1562 2373 -941 189 195 0 0 chr17 7767365 7767406 -81737147 + (TG)n Simple_repeat Simple_repeat 2 42 0 1075 147 26 103 chr17 7768446 7768678 -81735875 + MER20 DNA MER1_type 6 219 0 2100 91 7 17 chr17 7771384 7771680 -81732873 - AluSx SINE Alu -16 296 4 240 191 0 21 chr17 7772390 7772437 -81732116 + MLT1K LTR MaLR 509 554 -34 580 243 53 32 chr17 7773572 7773761 -81730792 - LTR33 LTR ERVL -2 519 327 14689 138 29 63 chr17 7773850 7774831 -81729722 + L1MA3 LINE L1 2181 3194 -4530 1566 56 0 95 chr17 7774831 7775062 -81729491 - AluSc SINE Alu -100 209 1 14689 138 29 63 chr17 7775062 7777788 -81726765 + L1MA3 LINE L1 3194 6011 -1713 19161 35 9 0 chr17 7777788 7780905 -81723648 + L1PA4 LINE L1 3046 6151 -4 14689 138 29 63 chr17 7780905 7781288 -81723265 + L1MA3 LINE L1 6011 6406 -1318 444 19 0 0 chr17 7781288 7781341 -81723212 + (CA)n Simple_repeat Simple_repeat 2 54 0 14689 138 29 63 chr17 7781341 7782751 -81721802 + L1MA3 LINE L1 6406 7478 -246 3681 114 6 4 chr17 7782751 7783261 -81721292 + MER9 LTR ERVK 1 511 0 32807 58 19 18 chr17 7783261 7784018 -81720535 + HERVK9 LTR ERVK 1 755 -5161 187 233 0 83 chr17 7784018 7784078 -81720475 + MER5B DNA MER1_type 55 109 -69 32807 58 19 18 chr17 7784078 7787421 -81717132 + HERVK9 LTR ERVK 755 4166 -1750 6561 70 21 1 chr17 7787417 7788243 -81716310 + HERVK9 LTR ERVK 4793 5634 -282 * 2342 105 17 12 chr17 7788268 7788620 -81715933 + HERVK9 LTR ERVK 4936 5916 0 3845 93 0 10 chr17 7788620 7789136 -81715417 + MER9 LTR ERVK 1 511 0 1538 88 20 36 chr17 7789136 7789386 -81715167 + L1MA2 LINE L1 6057 6302 -2 550 329 44 16 chr17 7789582 7789831 -81714722 + MIR SINE MIR 7 262 0 402 57 0 0 chr17 7790003 7790056 -81714497 + (T)n Simple_repeat Simple_repeat 1 53 0 895 148 216 26 chr17 7790296 7790689 -81713864 + MER51A LTR ERV1 1 633 -1 1144 155 186 26 chr17 7790690 7790954 -81713599 + MER51A-int LTR ERV1 1 306 -7510 1245 288 59 70 chr17 7791683 7792701 -81711852 + MER51A-int LTR ERV1 4799 5805 -1951 2628 44 0 0 chr17 7792754 7793052 -81711501 - AluY SINE Alu -13 298 1 2081 99 4 4 chr17 7793052 7793324 -81711229 - AluSp SINE Alu -19 294 23 334 303 47 38 chr17 7793530 7793741 -81710812 + MER51A-int LTR ERV1 4654 4866 -1810 225 0 0 0 chr17 7793812 7793837 -81710716 + (T)n Simple_repeat Simple_repeat 1 25 0 1700 186 58 0 chr17 7793909 7794221 -81710332 + MER51A-int LTR ERV1 7487 7816 0 750 128 195 46 chr17 7794223 7794418 -81710135 + MER51A LTR ERV1 1 224 -410 * 1105 128 78 25 chr17 7794415 7794619 -81709934 + MER51A LTR ERV1 420 634 0 338 224 56 37 chr17 7794620 7794727 -81709826 - L1M4 LINE L1 -1276 4870 4762 493 290 52 8 chr17 7794743 7794995 -81709558 - L1ME LINE L1 -3322 2758 2496 506 262 48 62 chr17 7794996 7795332 -81709221 - L1ME LINE L1 -5703 367 37 1283 118 0 42 chr17 7795553 7795606 -81708947 + L1PA15 LINE L1 5448 5502 -663 2429 53 0 7 chr17 7795606 7795922 -81708631 + AluY SINE Alu 1 314 0 1283 118 0 42 chr17 7795922 7796079 -81708474 + L1PA15 LINE L1 5502 5650 -515 2435 109 6 3 chr17 7796089 7796436 -81708117 - THE1B LTR MaLR -16 348 1 3601 116 4 0 chr17 7796436 7796952 -81707601 + L1PA15 LINE L1 5646 6163 -2 4020 146 56 53 chr17 7797168 7797461 -81707092 - L1MB5 LINE L1 0 6174 5883 207 0 0 0 chr17 7797461 7797484 -81707069 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 2249 99 0 0 chr17 7797484 7797766 -81706787 - AluSg SINE Alu -28 282 1 4020 146 56 53 chr17 7797766 7798359 -81706194 - L1MB5 LINE L1 -290 5884 5284 1047 65 0 7 chr17 7798656 7798794 -81705759 + L1PA7 LINE L1 6011 6147 -7 1917 166 0 23 chr17 7798798 7798970 -81705583 - AluJo SINE Alu -7 305 142 2218 60 4 4 chr17 7798970 7799235 -81705318 - AluY SINE Alu -5 306 42 1917 166 0 23 chr17 7799235 7799370 -81705183 - AluJo SINE Alu -170 142 5 5269 155 31 21 chr17 7800341 7802132 -81702421 - L1MA4 LINE L1 -11 6289 4464 283 193 0 0 chr17 7802574 7802631 -81701922 - MLT1K LTR MaLR -8 580 524 4457 170 9 37 chr17 7803905 7804645 -81699908 - L1 LINE L1 -782 5364 4658 2133 138 0 3 chr17 7804645 7804950 -81699603 - AluSx SINE Alu -8 304 1 4457 170 9 37 chr17 7804950 7805203 -81699350 - L1 LINE L1 -1488 4658 4399 1540 173 68 0 chr17 7805190 7805526 -81699027 - L1 LINE L1 -1983 4163 3805 * 4689 155 16 39 chr17 7805525 7806012 -81698541 + L1MA7 LINE L1 5341 5797 -494 2395 106 0 0 chr17 7806012 7806323 -81698230 + AluSx SINE Alu 1 311 -1 4689 155 16 39 chr17 7806323 7806807 -81697746 + L1MA7 LINE L1 5797 6290 -1 1067 184 15 25 chr17 7806965 7807161 -81697392 + AluSx SINE Alu 4 197 -115 6893 62 27 25 chr17 7807185 7808079 -81696474 + MER11D LTR ERVK 1 896 -1 1490 122 5 5 chr17 7808079 7808311 -81696242 + AluSg/x SINE Alu 80 311 0 1168 161 0 0 chr17 7808311 7808479 -81696074 + AluSg/x SINE Alu 135 302 -10 899 266 67 46 chr17 7808515 7808605 -81695948 - L1 LINE L1 -3382 2764 2677 681 224 0 8 chr17 7808605 7808730 -81695823 + FLAM_A SINE Alu 2 125 -8 899 266 67 46 chr17 7808730 7809058 -81695495 - L1 LINE L1 -3469 2677 2326 2318 99 0 16 chr17 7809058 7809371 -81695182 + AluSg1 SINE Alu 1 308 -1 899 266 67 46 chr17 7809371 7809564 -81694989 - L1 LINE L1 -3820 2326 2139 559 113 0 0 chr17 7809954 7810034 -81694519 + AluSg/x SINE Alu 217 296 -13 838 136 0 0 chr17 7811172 7811290 -81693263 - AluJo SINE Alu -108 204 87 1027 119 85 0 chr17 7811291 7811468 -81693085 - MER46B DNA MER2_type -169 67 1 1684 154 73 20 chr17 7811683 7811784 -81692769 - L1MB3 LINE L1 -7 6176 6082 2462 68 0 13 chr17 7811784 7812093 -81692460 - AluSc SINE Alu -4 305 1 1684 154 73 20 chr17 7812093 7812335 -81692218 - L1MB3 LINE L1 -101 6082 5815 640 128 11 0 chr17 7812337 7812431 -81692122 - AluJo/FRAM SINE Alu -25 287 193 2169 81 0 28 chr17 7812433 7812716 -81691837 - AluSq SINE Alu -38 275 1 698 188 0 7 chr17 7812720 7812858 -81691695 - L1PB4 LINE L1 0 6156 6020 357 213 22 4 chr17 7813087 7813322 -81691231 + (CA)n Simple_repeat Simple_repeat 1 239 0 452 261 6 6 chr17 7813333 7813513 -81691040 + (CA)n Simple_repeat Simple_repeat 1 180 0 275 227 8 0 chr17 7813559 7813687 -81690866 + (CA)n Simple_repeat Simple_repeat 1 129 0 334 237 0 48 chr17 7813700 7813833 -81690720 + (CTCA)n Simple_repeat Simple_repeat 4 127 -53 219 103 0 0 chr17 7813833 7813872 -81690681 + (CA)n Simple_repeat Simple_repeat 1 39 0 334 237 0 48 chr17 7813872 7813924 -81690629 + (CTCA)n Simple_repeat Simple_repeat 127 180 0 * 393 273 12 0 chr17 7813915 7814295 -81690258 + (CA)n Simple_repeat Simple_repeat 1 384 0 339 208 0 0 chr17 7814316 7814441 -81690112 + (CA)n Simple_repeat Simple_repeat 1 125 0 284 0 28 0 chr17 7814560 7814596 -81689957 + (CCCCAG)n Simple_repeat Simple_repeat 1 37 0 265 233 17 0 chr17 7816189 7816249 -81688304 + (CTGGGG)n Simple_repeat Simple_repeat 5 65 0 2173 112 7 3 chr17 7816348 7816653 -81687900 - AluSx SINE Alu -2 310 5 444 289 16 0 chr17 7817594 7817715 -81686838 - MIR SINE MIR -118 144 22 2358 89 3 0 chr17 7817894 7818214 -81686339 + AluSx SINE Alu 1 321 0 2502 94 0 0 chr17 7818219 7818528 -81686025 + AluSq SINE Alu 1 309 -4 2309 94 3 0 chr17 7818852 7819149 -81685404 + AluSq SINE Alu 1 298 -15 478 313 16 16 chr17 7819149 7819341 -81685212 + L1ME3A LINE L1 5974 6165 -5 677 198 0 9 chr17 7819443 7819589 -81684964 - FLAM_A SINE Alu 0 145 1 1498 130 153 11 chr17 7819802 7820063 -81684490 + AluJo SINE Alu 1 298 -4 2291 97 0 13 chr17 7820094 7820394 -81684159 + AluSg1 SINE Alu 1 296 -13 2420 71 0 34 chr17 7820484 7820806 -81683747 + AluY SINE Alu 1 311 0 1867 159 0 3 chr17 7820812 7821095 -81683458 + AluSx SINE Alu 1 282 -30 1080 54 0 0 chr17 7821098 7821264 -81683289 + AluSc SINE Alu 152 317 0 2145 107 3 7 chr17 7821936 7822234 -81682319 + AluSx SINE Alu 1 297 -15 405 0 0 0 chr17 7822237 7822282 -81682271 + (TA)n Simple_repeat Simple_repeat 2 46 0 340 308 75 15 chr17 7822503 7822636 -81681917 + MIR SINE MIR 116 256 -6 2223 84 0 24 chr17 7823477 7823773 -81680780 - AluSg SINE Alu -21 289 1 565 256 98 6 chr17 7823881 7824045 -81680508 - MIR SINE MIR 0 262 84 416 295 230 37 chr17 7824220 7824624 -81679929 + L2 LINE L2 2827 3308 -5 2175 79 3 28 chr17 7824893 7825218 -81679335 + AluSq SINE Alu 1 318 0 2289 113 0 3 chr17 7825426 7825726 -81678827 + AluSq SINE Alu 1 299 -14 292 276 31 10 chr17 7825736 7825834 -81678719 - MER5B DNA MER1_type 0 178 79 2238 111 3 0 chr17 7826466 7826764 -81677789 + AluSq SINE Alu 1 299 -14 2345 98 3 0 chr17 7826846 7827153 -81677400 + AluSg SINE Alu 1 308 -2 241 209 0 0 chr17 7828510 7828553 -81676000 + MER91A DNA MER1_type 119 161 -35 1244 81 6 0 chr17 7828599 7828760 -81675793 - AluSq SINE Alu -4 309 148 250 62 0 0 chr17 7828760 7828792 -81675761 - Alu SINE Alu -266 37 6 388 241 11 59 chr17 7830007 7830194 -81674359 + GA-rich Low_complexity Low_complexity 2 179 0 290 256 0 80 chr17 7830384 7830560 -81673993 + GA-rich Low_complexity Low_complexity 5 166 0 2242 83 40 7 chr17 7832385 7832686 -81671867 + AluY SINE Alu 1 311 0 320 280 16 74 chr17 7833063 7833252 -81671301 - L2 LINE L2 -881 2433 2256 438 211 22 160 chr17 7834992 7835126 -81669427 - L1MC5 LINE L1 -428 7533 7467 2079 105 40 17 chr17 7835126 7835422 -81669131 - AluSx SINE Alu -9 303 1 438 211 22 160 chr17 7835422 7835605 -81668948 - L1MC5 LINE L1 -494 7467 7260 242 248 168 30 chr17 7835738 7835839 -81668714 - L1MC5 LINE L1 -741 7220 7106 2244 120 3 0 chr17 7835839 7836139 -81668414 + AluSx SINE Alu 1 301 -11 1288 126 12 89 chr17 7836144 7836206 -81668347 + AluSg/x SINE Alu 83 148 -162 2376 87 0 3 chr17 7836206 7836504 -81668049 + AluSg1 SINE Alu 1 297 -12 1288 126 12 89 chr17 7836504 7836688 -81667865 + AluSg/x SINE Alu 148 310 0 632 186 113 105 chr17 7836708 7836829 -81667724 - L1MC5 LINE L1 -869 7092 6973 2346 107 0 3 chr17 7836829 7837139 -81667414 - AluSq SINE Alu -4 309 1 632 186 113 105 chr17 7837139 7837335 -81667218 - L1MC5 LINE L1 -988 6973 6769 2607 58 0 6 chr17 7837335 7837648 -81666905 + AluY SINE Alu 1 311 0 632 186 113 105 chr17 7837648 7837711 -81666842 - L1MC5 LINE L1 -1192 6769 6708 693 334 62 39 chr17 7837776 7838181 -81666372 - L1M4 LINE L1 -1437 4709 4315 2459 81 3 10 chr17 7838181 7838488 -81666065 - AluSp SINE Alu -8 305 1 2298 99 0 13 chr17 7838490 7838804 -81665749 - AluSx SINE Alu -2 310 1 693 334 62 39 chr17 7838804 7838968 -81665585 - L1M4 LINE L1 -1831 4315 4156 786 234 88 19 chr17 7838968 7839173 -81665380 + MER20 DNA MER1_type 1 219 0 693 334 62 39 chr17 7839173 7839239 -81665314 - L1M4 LINE L1 -1990 4156 4093 2382 103 0 0 chr17 7839239 7839551 -81665002 + AluSq SINE Alu 1 312 -1 693 334 62 39 chr17 7839551 7839743 -81664810 - L1M4 LINE L1 -2053 4093 3907 1469 149 65 19 chr17 7839743 7840004 -81664549 - AluJo SINE Alu -39 273 1 693 334 62 39 chr17 7840004 7840328 -81664225 - L1M4 LINE L1 -2239 3907 3522 210 258 0 0 chr17 7842050 7842112 -81662441 + (CA)n Simple_repeat Simple_repeat 1 62 0 289 256 0 58 chr17 7843337 7843493 -81661060 + C-rich Low_complexity Low_complexity 4 150 0 1020 141 39 0 chr17 7843677 7843833 -81660720 - FRAM SINE Alu -16 160 1 253 352 6 22 chr17 7844654 7844833 -81659720 + GA-rich Low_complexity Low_complexity 2 177 0 207 0 0 0 chr17 7844932 7844955 -81659598 + (CAGC)n Simple_repeat Simple_repeat 2 24 0 482 186 0 28 chr17 7845267 7845412 -81659141 + (CA)n Simple_repeat Simple_repeat 2 142 0 1753 134 7 22 chr17 7847091 7847366 -81657187 + AluJb SINE Alu 25 295 -17 1729 113 32 0 chr17 7847395 7847642 -81656911 + AluSx SINE Alu 46 300 -12 262 214 0 57 chr17 7849283 7849419 -81655134 + G-rich Low_complexity Low_complexity 1 128 0 492 165 0 0 chr17 7850245 7850324 -81654229 + FLAM SINE Alu 50 128 -15 2092 105 0 0 chr17 7850328 7850613 -81653940 + AluSg SINE Alu 1 285 -25 21 0 0 0 chr17 7850613 7850634 -81653919 + AT_rich Low_complexity Low_complexity 1 21 0 2228 99 0 6 chr17 7850656 7850969 -81653584 - AluSx SINE Alu 0 312 2 249 288 0 0 chr17 7852427 7852486 -81652067 + L2 LINE L2 3252 3310 -3 189 187 40 13 chr17 7854842 7854917 -81649636 + G-rich Low_complexity Low_complexity 2 78 0 209 192 0 19 chr17 7855177 7855229 -81649324 + GA-rich Low_complexity Low_complexity 3 53 0 224 398 16 8 chr17 7855946 7856069 -81648484 + L3 LINE CR1 1448 1571 -6 21 36 0 0 chr17 7857734 7857762 -81646791 + GC_rich Low_complexity Low_complexity 1 28 0 198 0 0 0 chr17 7862175 7862197 -81642356 + (CCCCCA)n Simple_repeat Simple_repeat 3 24 0 569 222 74 37 chr17 7864381 7864570 -81639983 - MER91A DNA MER1_type 0 196 1 371 261 96 0 chr17 7865776 7865891 -81638662 + L1ME3 LINE L1 5837 5962 -208 303 235 0 121 chr17 7865925 7866091 -81638462 + L1ME3 LINE L1 5940 6085 -77 2054 118 0 3 chr17 7866153 7866450 -81638103 - AluSx SINE Alu -16 296 1 2071 92 64 0 chr17 7868750 7869032 -81635521 + AluSq SINE Alu 1 300 -13 2196 116 10 0 chr17 7869146 7869448 -81635105 + AluSx SINE Alu 1 305 -7 252 346 48 0 chr17 7870139 7870243 -81634310 - MIR SINE MIR -107 155 47 2446 55 7 3 chr17 7870373 7870683 -81633870 + AluY SINE Alu 1 311 0 2158 60 0 18 chr17 7871028 7871313 -81633240 - AluY SINE Alu -13 298 19 24 0 0 0 chr17 7872002 7872026 -81632527 + GC_rich Low_complexity Low_complexity 1 24 0 243 146 0 0 chr17 7873728 7873769 -81630784 + (TTC)n Simple_repeat Simple_repeat 1 41 0 21 0 0 0 chr17 7875479 7875500 -81629053 + GC_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr17 7875565 7875602 -81628951 + GC_rich Low_complexity Low_complexity 1 37 0 236 326 11 33 chr17 7875859 7876040 -81628513 + C-rich Low_complexity Low_complexity 2 178 0 25 31 0 0 chr17 7877045 7877077 -81627476 + GC_rich Low_complexity Low_complexity 1 32 0 294 98 33 16 chr17 7877082 7877143 -81627410 + CT-rich Low_complexity Low_complexity 1 62 0 2003 125 7 10 chr17 7882455 7882590 -81621963 + AluJo SINE Alu 1 135 -177 2217 108 0 3 chr17 7882590 7882895 -81621658 + AluSg SINE Alu 1 304 -6 2003 125 7 10 chr17 7882895 7883062 -81621491 + AluJo SINE Alu 135 302 -10 2311 87 0 3 chr17 7883067 7883377 -81621176 - AluSg SINE Alu -1 309 1 21 36 0 0 chr17 7883377 7883405 -81621148 + AT_rich Low_complexity Low_complexity 1 28 0 256 297 103 32 chr17 7884980 7885037 -81619516 - MIR SINE MIR 0 262 210 2195 112 0 0 chr17 7885037 7885340 -81619213 - AluSg SINE Alu -1 309 7 256 297 103 32 chr17 7885340 7885437 -81619116 - MIR SINE MIR -52 210 97 328 267 100 0 chr17 7885439 7885559 -81618994 + L2 LINE L2 3174 3305 -8 2395 81 0 0 chr17 7885560 7885867 -81618686 + AluSc SINE Alu 1 307 -2 2274 98 3 3 chr17 7885930 7886236 -81618317 - AluSg SINE Alu -4 306 1 2009 104 35 3 chr17 7887215 7887504 -81617049 + AluSx SINE Alu 1 298 -14 40 67 0 0 chr17 7888884 7888959 -81615594 + GC_rich Low_complexity Low_complexity 1 75 0 296 277 0 50 chr17 7889183 7889284 -81615269 + G-rich Low_complexity Low_complexity 3 98 0 196 321 0 0 chr17 7890647 7890703 -81613850 + L2 LINE L2 3258 3313 0 182 167 0 24 chr17 7890796 7890838 -81613715 - L2 LINE L2 -665 2649 2609 294 331 60 23 chr17 7890849 7890982 -81613571 - L2 LINE L2 -1 3312 3175 2381 64 7 3 chr17 7891293 7891591 -81612962 + AluSp SINE Alu 1 299 -14 352 296 301 10 chr17 7891826 7892022 -81612531 - MIR SINE MIR -2 260 8 224 241 0 0 chr17 7892490 7892544 -81612009 + T-rich Low_complexity Low_complexity 1 54 0 307 330 106 28 chr17 7892605 7892784 -81611769 - L2 LINE L2 0 3313 3121 2355 54 3 10 chr17 7892823 7893119 -81611434 + AluY SINE Alu 1 294 -17 2116 91 24 3 chr17 7893361 7893648 -81610905 + AluSx SINE Alu 3 295 -17 1975 117 24 0 chr17 7893652 7893943 -81610610 + AluSg1 SINE Alu 3 300 -9 867 138 0 0 chr17 7894727 7894850 -81609703 - AluJb SINE Alu -189 123 1 229 336 64 0 chr17 7894884 7894994 -81609559 - MIR SINE MIR -38 224 108 1568 193 10 20 chr17 7895011 7895316 -81609237 - AluJb SINE Alu -10 302 1 2070 123 0 0 chr17 7895369 7895653 -81608900 + AluSg SINE Alu 3 286 -24 437 87 0 0 chr17 7895662 7895731 -81608822 + MER41A LTR ERV1 399 467 -87 2245 114 0 0 chr17 7895746 7896044 -81608509 + AluSx SINE Alu 1 298 -14 24 32 0 0 chr17 7897486 7897517 -81607036 + AT_rich Low_complexity Low_complexity 1 31 0 25 31 0 0 chr17 7899030 7899062 -81605491 + GC_rich Low_complexity Low_complexity 1 32 0 28 79 0 0 chr17 7900094 7900157 -81604396 + GC_rich Low_complexity Low_complexity 1 63 0 1667 164 13 10 chr17 7901182 7901486 -81603067 - AluJb SINE Alu -7 305 1 2234 102 0 10 chr17 7901867 7902170 -81602383 - AluSq SINE Alu -13 300 1 738 204 21 14 chr17 7902239 7902381 -81602172 - FRAM SINE Alu -25 151 9 2199 93 0 3 chr17 7902391 7902680 -81601873 - AluSx SINE Alu -16 296 9 2484 55 0 10 chr17 7902698 7903010 -81601543 - AluY SINE Alu 0 311 3 1836 114 8 4 chr17 7903010 7903264 -81601289 - AluSx SINE Alu -57 255 1 189 0 0 0 chr17 7903270 7903291 -81601262 + (T)n Simple_repeat Simple_repeat 1 21 0 2313 96 0 6 chr17 7903305 7903617 -81600936 - AluSg SINE Alu 0 310 1 715 136 9 0 chr17 7903635 7903745 -81600808 - HY1 scRNA scRNA 0 112 2 265 267 222 11 chr17 7903802 7903982 -81600571 + L2 LINE L2 2531 2748 -566 2082 43 43 43 chr17 7903983 7904298 -81600255 + AluY SINE Alu 1 315 0 532 250 89 72 chr17 7904352 7904712 -81599841 + L2 LINE L2 2869 3234 -79 2198 130 0 9 chr17 7904786 7905101 -81599452 - AluSx SINE Alu 0 312 1 347 273 176 91 chr17 7905102 7905143 -81599410 - L2 LINE L2 -10 3303 3267 1061 164 6 0 chr17 7905143 7905302 -81599251 + FRAM SINE Alu 1 160 -6 2135 109 0 3 chr17 7905308 7905601 -81598952 + AluSg SINE Alu 1 292 -18 2038 88 26 39 chr17 7905609 7905917 -81598636 + AluSg SINE Alu 1 304 -6 2335 94 0 0 chr17 7905917 7906216 -81598337 + AluSq SINE Alu 1 299 -14 347 273 176 91 chr17 7906216 7906443 -81598110 - L2 LINE L2 -56 3257 2982 2165 114 0 13 chr17 7906443 7906750 -81597803 + AluSq SINE Alu 1 303 -10 347 273 176 91 chr17 7906750 7906804 -81597749 - L2 LINE L2 -331 2982 2934 688 180 78 106 chr17 7906857 7907074 -81597479 - MER20 DNA MER1_type 0 219 9 2131 115 10 0 chr17 7907154 7907450 -81597103 + AluSp SINE Alu 1 299 -14 362 286 97 39 chr17 7907459 7907674 -81596879 - L2 LINE L2 -2167 1147 946 1805 148 0 43 chr17 7907674 7907979 -81596574 + AluJb SINE Alu 3 294 -18 2060 75 45 24 chr17 7907979 7908292 -81596261 + AluY SINE Alu 1 311 0 362 286 97 39 chr17 7908292 7908334 -81596219 - L2 LINE L2 -2367 947 874 799 168 29 92 chr17 7908374 7908547 -81596006 + AluSq SINE Alu 1 162 -151 511 66 0 0 chr17 7908549 7908625 -81595928 + Alu SINE Alu 225 300 0 855 164 0 0 chr17 7908636 7908770 -81595783 + AluSg/x SINE Alu 161 294 -18 1979 132 24 0 chr17 7908775 7909064 -81595489 + AluSx SINE Alu 2 297 -15 954 321 106 27 chr17 7909066 7909393 -81595160 - L2 LINE L2 -2474 840 540 2293 91 0 0 chr17 7909393 7909691 -81594862 + AluSg SINE Alu 1 298 -12 2177 76 10 16 chr17 7909691 7909995 -81594558 + AluY SINE Alu 1 302 -9 954 321 106 27 chr17 7909995 7910268 -81594285 - L2 LINE L2 -2773 541 191 284 316 20 7 chr17 7910602 7910754 -81593799 + L1M4 LINE L1 3605 3758 -2388 2107 123 0 16 chr17 7910754 7910891 -81593662 + AluSx SINE Alu 1 139 -173 2176 67 0 0 chr17 7910891 7911161 -81593392 + AluY SINE Alu 37 306 -5 2107 123 0 16 chr17 7911161 7911333 -81593220 + AluSx SINE Alu 139 305 -7 262 316 0 60 chr17 7911333 7911379 -81593174 + L1M4 LINE L1 3844 3891 -2255 2178 116 0 0 chr17 7911379 7911681 -81592872 + AluY SINE Alu 1 302 -9 2438 75 3 0 chr17 7911685 7911991 -81592562 + AluSp SINE Alu 1 307 -6 262 316 0 60 chr17 7911991 7912107 -81592446 + L1M4 LINE L1 3894 4001 -2145 309 264 27 78 chr17 7912137 7912269 -81592284 + L1M4 LINE L1 4075 4212 -1934 2143 118 3 0 chr17 7912269 7912575 -81591978 + AluSg SINE Alu 2 308 -2 309 264 27 78 chr17 7912575 7912628 -81591925 + L1M4 LINE L1 4212 4246 -1900 2114 112 10 0 chr17 7912628 7912933 -81591620 + AluSp SINE Alu 2 309 -4 309 264 27 78 chr17 7912933 7913004 -81591549 + L1M4 LINE L1 4246 4319 -1827 315 122 0 0 chr17 7913067 7913116 -81591437 + (A)n Simple_repeat Simple_repeat 1 49 0 1833 170 23 3 chr17 7913116 7913422 -81591131 + AluJb SINE Alu 1 312 0 1082 331 66 64 chr17 7913429 7913455 -81591098 + L1M4 LINE L1 4345 4369 -1777 1942 127 0 3 chr17 7913455 7913760 -81590793 + AluSg SINE Alu 1 304 0 1082 331 66 64 chr17 7913760 7913989 -81590564 + L1M4 LINE L1 4369 4596 -1550 2082 121 0 3 chr17 7913989 7914287 -81590266 + AluSq SINE Alu 1 297 -16 1082 331 66 64 chr17 7914287 7914438 -81590115 + L1M4 LINE L1 4596 4745 -1401 2221 108 3 6 chr17 7914438 7914752 -81589801 + AluSq SINE Alu 1 313 0 1082 331 66 64 chr17 7914752 7915160 -81589393 + L1M4 LINE L1 4745 5167 -979 2022 138 0 0 chr17 7915160 7915457 -81589096 + AluSx SINE Alu 1 297 -15 1082 331 66 64 chr17 7915457 7915543 -81589010 + L1M4 LINE L1 5167 5251 -895 2287 104 3 0 chr17 7915550 7915858 -81588695 - AluSp SINE Alu -4 309 1 2163 89 0 0 chr17 7915869 7916175 -81588378 - AluY SINE Alu 0 306 1 2148 113 7 0 chr17 7916267 7916569 -81587984 + AluSx SINE Alu 1 304 -8 730 225 33 0 chr17 7916665 7916816 -81587737 + AluJb SINE Alu 140 295 -17 2163 110 3 7 chr17 7916818 7917127 -81587426 + AluSp SINE Alu 2 309 -4 2072 118 10 0 chr17 7917301 7917597 -81586956 - AluSx SINE Alu -13 299 1 205 362 92 28 chr17 7917916 7918134 -81586419 - L2 LINE L2 -708 2606 2375 304 268 27 80 chr17 7920412 7920524 -81584029 - MIR SINE MIR -75 187 82 220 261 0 0 chr17 7924451 7924497 -81580056 + C-rich Low_complexity Low_complexity 2 47 0 2292 68 13 7 chr17 7924695 7925002 -81579551 - AluY SINE Alu -1 310 2 1911 118 28 14 chr17 7926446 7926735 -81577818 - AluSx SINE Alu -13 299 7 959 154 91 11 chr17 7929142 7929317 -81575236 - MER5A DNA MER1_type 0 189 1 376 306 11 17 chr17 7931937 7932117 -81572436 + (CCG)n Simple_repeat Simple_repeat 2 180 0 21 36 0 0 chr17 7932324 7932352 -81572201 + GC_rich Low_complexity Low_complexity 1 28 0 943 86 0 0 chr17 7932831 7932959 -81571594 - AluSg/x SINE Alu 0 312 185 1976 99 7 3 chr17 7933055 7933357 -81571196 - AluSx SINE Alu 0 303 1 243 215 32 75 chr17 7933482 7933575 -81570978 + L2 LINE L2 2910 2998 -315 319 298 144 21 chr17 7933605 7933793 -81570760 + L2 LINE L2 3102 3312 -1 258 56 0 0 chr17 7933865 7933914 -81570639 + Alu SINE Alu 1 34 -266 2316 112 0 3 chr17 7934590 7934904 -81569649 + AluSq SINE Alu 1 313 0 1935 106 6 45 chr17 7934918 7935055 -81569498 + AluSx SINE Alu 1 142 -170 2085 78 13 42 chr17 7935055 7935362 -81569191 + AluY SINE Alu 1 298 -13 1935 106 6 45 chr17 7935362 7935536 -81569017 + AluSx SINE Alu 142 300 -12 1509 74 79 0 chr17 7935538 7935741 -81568812 + AluY SINE Alu 1 219 -92 1891 141 0 0 chr17 7935841 7936117 -81568436 - AluSx SINE Alu -36 276 1 1809 149 17 7 chr17 7936194 7936496 -81568057 - AluJb SINE Alu -7 305 1 668 267 172 9 chr17 7936602 7936934 -81567619 + MLT1G3 LTR MaLR 8 357 -173 2426 57 0 0 chr17 7937072 7937368 -81567185 + AluY SINE Alu 1 296 -15 395 328 111 16 chr17 7937570 7937759 -81566794 - L2 LINE L2 0 3313 3107 1207 131 0 0 chr17 7937804 7937979 -81566574 - AluSg/x SINE Alu -4 306 132 1953 59 4 0 chr17 7937979 7938217 -81566336 - AluSx SINE Alu -15 297 59 1824 146 0 55 chr17 7938394 7938544 -81566009 + AluJo SINE Alu 1 125 -187 2268 90 7 0 chr17 7938544 7938844 -81565709 + AluSg SINE Alu 1 302 -8 1824 146 0 55 chr17 7938844 7939021 -81565532 + AluJo SINE Alu 125 310 -2 2017 108 4 0 chr17 7939180 7939481 -81565072 + AluSx SINE Alu 6 307 0 235 340 65 39 chr17 7939574 7939806 -81564747 - L2 LINE L2 -224 3048 2811 196 322 163 56 chr17 7939798 7940031 -81564522 - L2 LINE L2 -763 2551 2294 * 1843 87 4 12 chr17 7940122 7940375 -81564178 + AluSc SINE Alu 1 251 -58 545 302 42 0 chr17 7940490 7940679 -81563874 + MIR SINE MIR 6 202 -60 380 295 0 0 chr17 7940679 7940791 -81563762 + MLT1F LTR MaLR 1 112 -430 752 220 19 3 chr17 7940796 7940965 -81563588 + MLT1F LTR MaLR 65 281 -314 2143 97 7 0 chr17 7940965 7941254 -81563299 + AluSx SINE Alu 1 291 -21 268 379 0 24 chr17 7941295 7941419 -81563134 - MIR SINE MIR -108 154 34 2071 136 0 0 chr17 7941504 7941799 -81562754 + AluSx SINE Alu 1 295 -17 229 322 89 0 chr17 7941837 7941927 -81562626 - L2 LINE L2 -46 3226 3129 233 307 74 61 chr17 7941943 7942106 -81562447 + L2 LINE L2 3037 3201 -112 1951 141 10 13 chr17 7942975 7943109 -81561444 + AluJb SINE Alu 1 134 -178 2191 105 0 25 chr17 7943109 7943423 -81561130 + AluSx SINE Alu 1 306 -6 1951 141 10 13 chr17 7943423 7943600 -81560953 + AluJb SINE Alu 134 311 -1 2014 157 0 0 chr17 7944209 7944508 -81560045 + AluSx SINE Alu 1 299 -13 2578 174 32 100 chr17 7944508 7944627 -81559926 + L1ME1 LINE L1 5429 5555 -611 1602 211 0 13 chr17 7944627 7944931 -81559622 + AluJo SINE Alu 1 300 -12 2232 78 0 7 chr17 7944933 7945257 -81559296 + AluY SINE Alu 1 322 0 2168 111 0 0 chr17 7945257 7945545 -81559008 + AluSx SINE Alu 2 289 -23 2107 85 32 3 chr17 7945554 7945837 -81558716 + AluSq SINE Alu 1 291 -22 2578 174 32 100 chr17 7945837 7945928 -81558625 + L1ME1 LINE L1 5563 5659 -507 2346 70 0 13 chr17 7945928 7946230 -81558323 + AluY SINE Alu