4105 83 7 0 chr17_random 0 631 -650958 - L1P2 LINE L1 -345 5809 5175 1489 148 17 34 chr17_random 631 2280 -649309 - GSATII Satellite centromeric 0 1621 1 739 130 2 0 chr17_random 2380 5940 -645649 - CER Satellite Satellite 0 3566 1 780 110 3 1 chr17_random 6049 10856 -640733 + CER Satellite Satellite 1 4813 0 758 138 2 1 chr17_random 10959 22311 -629278 + CER Satellite Satellite 1 11363 -31 433 67 8 176 chr17_random 22316 22339 -629250 - SVA Other Other -431 955 930 7894 57 0 0 chr17_random 22339 23299 -628290 - LTR5 LTR ERVK -9 960 1 433 67 8 176 chr17_random 23299 23394 -628195 - SVA Other Other -456 930 857 43010 40 0 2 chr17_random 23395 28458 -623131 - HERVK LTR ERVK -96 7147 2093 733 151 3 1 chr17_random 28458 30840 -620749 + CER Satellite Satellite 1 2387 -36 699 153 4 1 chr17_random 30942 32831 -618758 + CER Satellite Satellite 1 1894 -31 719 131 3 0 chr17_random 32843 35008 -616581 + CER Satellite Satellite 1 2169 -27 728 140 5 3 chr17_random 35109 39568 -612021 - CER Satellite Satellite 0 4469 1 734 136 4 0 chr17_random 39669 45187 -606402 - CER Satellite Satellite 0 5535 1 36183 42 2 0 chr17_random 45287 50470 -601119 + L1PA2 LINE L1 912 6105 -50 752 129 3 1 chr17_random 50571 59997 -591592 - CER Satellite Satellite 0 9437 1 740 131 1 0 chr17_random 60036 62685 -588904 - CER Satellite Satellite 0 2650 1 752 130 3 2 chr17_random 63263 78489 -573100 - CER Satellite Satellite 0 15240 1 734 131 1 0 chr17_random 78528 83522 -568067 - CER Satellite Satellite 0 4999 1 192 40 0 0 chr17_random 85069 85094 -566495 + (CA)n Simple_repeat Simple_repeat 2 26 0 975 252 42 4 chr17_random 85096 85358 -566231 - AluJo SINE Alu -39 273 2 323 247 0 0 chr17_random 85394 85467 -566122 + AluJ/FRAM SINE Alu 226 298 -4 217 338 0 0 chr17_random 86134 86202 -565387 + MIR SINE MIR 54 121 -87 5915 105 15 28 chr17_random 86216 86896 -564693 + L1PA8 LINE L1 4679 5366 -806 1606 177 0 3 chr17_random 86896 87299 -564290 + AluSg SINE Alu 1 402 0 5915 105 15 28 chr17_random 87299 88121 -563468 + L1PA8 LINE L1 5366 6172 0 1225 276 30 39 chr17_random 88775 89181 -562408 - MER93a LTR ERV1 0 402 1 840 299 39 3 chr17_random 89393 89748 -561841 - L1 LINE L1 -3596 2438 2071 1208 242 110 28 chr17_random 89749 90113 -561476 - MSTD LTR MaLR 0 396 3 754 224 7 13 chr17_random 90257 90409 -561180 - AluJb SINE Alu -22 290 140 1239 306 29 10 chr17_random 90727 91145 -560444 - L1 LINE L1 -5528 427 2 1227 158 9 9 chr17_random 91734 91956 -559633 + AluYb8 SINE Alu 1 222 -96 245 350 0 0 chr17_random 91958 92038 -559551 + C-rich Low_complexity Low_complexity 1 80 0 791 137 2 0 chr17_random 92139 116794 -534795 - CER Satellite Satellite 0 24695 1 21 0 0 0 chr17_random 117303 117324 -534265 + AT_rich Low_complexity Low_complexity 1 21 0 23 78 0 0 chr17_random 118056 118107 -533482 + AT_rich Low_complexity Low_complexity 1 51 0 549 237 0 9 chr17_random 118472 118585 -533004 + MER49 LTR ERV1 4 115 -808 1741 126 68 0 chr17_random 118585 118863 -532726 - LTR66 LTR ERVL 0 610 314 1550 88 0 0 chr17_random 118858 119062 -532527 - LTR66 LTR ERVL -401 209 6 * 3889 114 16 2 chr17_random 119067 119627 -531962 - HERVL66 LTR ERVL 0 4329 3762 3721 170 10 14 chr17_random 119617 120508 -531081 - HERVL66 LTR ERVL -734 3595 2656 * 8410 125 15 0 chr17_random 120490 122187 -529402 - HERVL66 LTR ERVL -2532 1797 44 1007 180 137 25 chr17_random 122188 122466 -529123 + LTR66 LTR ERVL 302 610 0 761 196 25 69 chr17_random 122466 122656 -528933 + MER49 LTR ERV1 106 286 -637 43128 38 22 2 chr17_random 122770 128798 -522791 + L1PA2 LINE L1 1 6155 0 21 0 0 0 chr17_random 128798 128819 -522770 + AT_rich Low_complexity Low_complexity 1 21 0 1542 242 59 10 chr17_random 128819 129327 -522262 - L1MB2 LINE L1 -157 6250 5610 489 196 65 14 chr17_random 129880 130048 -521541 - L1MB2 LINE L1 -750 5632 5457 513 274 0 0 chr17_random 130099 130212 -521377 - FLAM_C SINE Alu -28 115 3 1000 289 62 38 chr17_random 130309 130866 -520723 - L1MB2 LINE L1 -1016 5366 4793 1683 195 7 0 chr17_random 130866 131163 -520426 - AluSx SINE Alu -13 299 1 1000 289 62 38 chr17_random 131163 131187 -520402 - L1MB2 LINE L1 -1589 4793 4771 633 270 180 9 chr17_random 131217 131561 -520028 - L1MB2 LINE L1 -3273 3109 2707 577 148 35 52 chr17_random 131563 131678 -519911 + AluSg/x SINE Alu 189 301 -9 24 53 0 0 chr17_random 131686 131724 -519865 + AT_rich Low_complexity Low_complexity 1 38 0 695 281 70 34 chr17_random 131762 132381 -519208 - L1MB2 LINE L1 -3689 2693 2055 330 314 38 38 chr17_random 132478 132742 -518847 - L1MB2 LINE L1 -4528 1856 1593 587 329 71 43 chr17_random 132758 133153 -518436 - L1MB2 LINE L1 -5042 1342 937 1763 140 7 11 chr17_random 137205 137483 -514106 + AluSg SINE Alu 1 277 -33 198 0 0 0 chr17_random 138099 138121 -513468 + (T)n Simple_repeat Simple_repeat 1 22 0 1172 296 37 33 chr17_random 138577 139122 -512467 - L1MB2 LINE L1 -28 6155 5662 828 289 17 10 chr17_random 139112 139406 -512183 - L1MB2 LINE L1 -1332 4814 4519 * 319 283 0 0 chr17_random 139412 139525 -512064 - L1MB2 LINE L1 -3262 2884 2772 6603 84 13 0 chr17_random 139528 140497 -511092 - L1PA6 LINE L1 -6 6148 5173 1421 119 19 33 chr17_random 140497 141570 -510019 - GSATII Satellite centromeric -1 1058 1 1484 106 19 33 chr17_random 141586 143120 -508469 - GSATII Satellite centromeric -16 1511 1 13914 115 28 7 chr17_random 143126 145416 -506173 - L1PA6 LINE L1 -979 5167 2443 586 222 0 0 chr17_random 145677 145805 -505784 + FLAM_C SINE Alu 11 138 0 3794 97 95 2 chr17_random 145949 146471 -505118 + LTR66 LTR ERVL 1 580 -30 366 23 0 0 chr17_random 146471 146514 -505075 + (TG)n Simple_repeat Simple_repeat 2 44 0 3794 97 95 2 chr17_random 146514 146549 -505040 + LTR66 LTR ERVL 580 610 0 12664 106 14 0 chr17_random 146549 148273 -503316 + HERVL66 LTR ERVL 1 1749 -2580 1583 230 15 37 chr17_random 148273 150639 -500950 + BSR/Beta Satellite Satellite 1 2314 -21 247 339 34 25 chr17_random 150657 150775 -500814 + BSR/Beta Satellite Satellite 252 370 -9 4008 67 2 0 chr17_random 150877 151357 -500232 - L1PA5 LINE L1 -6 6148 5668 4707 63 3 14 chr17_random 151357 151996 -499593 + L1P LINE L1 4766 5397 -749 1461 248 27 29 chr17_random 152025 153197 -498392 + BSR/Beta Satellite Satellite 1 1169 -1 672 245 13 45 chr17_random 153210 154680 -496909 + BSR/Beta Satellite Satellite 1 1422 -38 368 313 37 5 chr17_random 154765 154915 -496674 + BSR/Beta Satellite Satellite 1 154 -53 2131 92 0 78 chr17_random 154916 155308 -496281 - AluSc SINE Alu 0 309 130 1752 186 7 3 chr17_random 155308 155609 -495980 + AluSx SINE Alu 2 303 -9 2131 92 0 78 chr17_random 155609 155730 -495859 - AluSc SINE Alu -179 130 1 1260 263 28 26 chr17_random 155730 157972 -493617 + BSR/Beta Satellite Satellite 1 2245 -309 674 237 21 34 chr17_random 158001 159385 -492204 + BSR/Beta Satellite Satellite 1 1366 -2 1276 260 9 37 chr17_random 159473 160494 -491095 - BSR/Beta Satellite Satellite -47 992 1 3391 174 25 25 chr17_random 160494 160868 -490721 - LTR43 LTR ERV1 0 602 225 1759 171 0 0 chr17_random 160868 161175 -490414 - AluSx SINE Alu 0 307 1 3391 174 25 25 chr17_random 161175 161401 -490188 - LTR43 LTR ERV1 -376 226 1 3049 201 50 26 chr17_random 161401 162059 -489530 - LTR43-int LTR ERV1 0 4798 4125 307 233 0 0 chr17_random 162055 162115 -489474 - LTR43-int LTR ERV1 -906 3892 3833 * 440 309 31 15 chr17_random 162671 162871 -488718 - LTR43-int LTR ERV1 -5240 1965 1693 1798 274 82 62 chr17_random 162876 163835 -487754 - LTR43-int LTR ERV1 -3819 979 1 2785 167 8 16 chr17_random 163835 164320 -487269 - LTR43 LTR ERV1 0 602 122 459 0 0 0 chr17_random 166409 166460 -485129 + (CA)n Simple_repeat Simple_repeat 2 52 0 608 256 14 28 chr17_random 168279 168494 -483095 - LTR4 LTR ERV1 0 596 385 304 243 116 85 chr17_random 168713 168902 -482687 - LTR4 LTR ERV1 -401 195 1 466 300 81 36 chr17_random 168947 169280 -482309 - L1ME LINE L1 -5261 809 462 367 311 8 0 chr17_random 169410 169529 -482060 - L1ME3A LINE L1 -232 5938 5819 3793 212 33 23 chr17_random 169536 170452 -481137 - L1MB3 LINE L1 -1 6182 5258 1316 260 106 12 chr17_random 170464 170953 -480636 - L1MB3 LINE L1 -1016 5130 4596 3895 265 94 27 chr17_random 170962 171512 -480077 - L1MB3 LINE L1 -1726 4420 3908 681 140 10 0 chr17_random 171512 171612 -479977 - HY3 scRNA scRNA 0 101 1 3895 265 94 27 chr17_random 171612 173070 -478519 - L1MB3 LINE L1 -2238 3908 2278 663 256 73 33 chr17_random 173202 173503 -478086 + L1M4 LINE L1 509 821 -5721 419 341 35 0 chr17_random 173621 173794 -477795 + HERVL68 LTR ERVL 2592 2770 -2760 697 274 42 23 chr17_random 173799 174014 -477575 + HERVL68 LTR ERVL 2942 3160 -2370 311 243 110 36 chr17_random 174084 174265 -477324 + HERVL68 LTR ERVL 1449 3427 -1404 362 319 102 0 chr17_random 174796 174962 -476627 + HERVL68 LTR ERVL 2036 2218 -819 1189 213 134 21 chr17_random 176288 176616 -474973 + MLT1A1 LTR MaLR 1 365 0 474 313 62 17 chr17_random 176715 177006 -474583 - L1M4 LINE L1 -1439 4707 4404 396 333 61 34 chr17_random 177007 177334 -474255 - MER93a LTR ERV1 0 402 67 22 0 0 0 chr17_random 177714 177736 -473853 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr17_random 177879 177907 -473682 + AT_rich Low_complexity Low_complexity 1 28 0 801 93 0 19 chr17_random 179641 179748 -471841 + AluSq/x SINE Alu 17 121 -191 277 200 144 11 chr17_random 179835 179925 -471664 + L1MC5 LINE L1 7799 7900 -61 304 238 10 30 chr17_random 180053 180154 -471435 + L1ME3A LINE L1 6072 6170 0 446 286 40 40 chr17_random 180626 180801 -470788 - MER5B DNA MER1_type -3 175 1 1460 190 3 81 chr17_random 180989 181299 -470290 - AluJb SINE Alu -14 288 3 276 259 0 0 chr17_random 181797 181855 -469734 - MER93a LTR ERV1 -344 58 1 1899 141 16 13 chr17_random 183530 183836 -467753 - AluSp SINE Alu -6 307 1 1260 234 82 51 chr17_random 184239 184753 -466836 - MER92B LTR ERV1 -74 562 33 774 271 56 30 chr17_random 184756 185058 -466531 + MER21B LTR ERV1 404 713 -150 663 213 24 106 chr17_random 185837 185953 -465636 + MER67C LTR ERV1 1 86 -624 1334 270 0 27 chr17_random 185953 186109 -465480 - AluJb SINE Alu -14 288 142 1919 155 0 25 chr17_random 186109 186426 -465163 - AluSg SINE Alu -1 309 1 1334 270 0 27 chr17_random 186426 186565 -465024 - AluJb SINE Alu -160 142 1 663 213 24 106 chr17_random 186565 186702 -464887 + MER67C LTR ERV1 86 233 -477 1318 196 77 35 chr17_random 186769 187054 -464535 + AluJo SINE Alu 10 306 -6 257 100 50 0 chr17_random 188031 188248 -463341 + Alu SINE Alu 244 462 0 219 353 33 33 chr17_random 189041 189194 -462395 + MIR SINE MIR 73 225 -37 184 224 41 0 chr17_random 189277 189326 -462263 + MIR SINE MIR 78 128 -80 1254 208 151 27 chr17_random 189380 189712 -461877 + THE1C LTR MaLR 3 375 0 240 276 138 17 chr17_random 189835 189951 -461638 - LTR45 LTR ERV1 -2 523 394 858 303 42 10 chr17_random 190364 190671 -460918 - MLT1A1 LTR MaLR -11 354 38 1878 148 10 3 chr17_random 190704 191008 -460581 - AluSq SINE Alu -3 310 5 664 296 136 27 chr17_random 191140 191471 -460118 + MLT1E LTR MaLR 223 589 -4 15702 114 6 3 chr17_random 193763 196809 -454780 + L1PA7 LINE L1 2974 6032 -122 24 0 0 0 chr17_random 197188 197212 -454377 + AT_rich Low_complexity Low_complexity 1 24 0 249 244 61 12 chr17_random 197898 197980 -453609 + L1M3e LINE L1 1944 2029 -5001 1093 269 37 27 chr17_random 198004 198301 -453288 - AluJo SINE Alu 0 302 3 2032 302 12 5 chr17_random 198320 199095 -452494 + L1M3e LINE L1 3310 4089 -3017 * 3779 210 52 20 chr17_random 199079 199609 -451980 + L1PA16 LINE L1 5210 5771 -395 2058 123 0 7 chr17_random 199609 199902 -451687 - AluSc SINE Alu -18 291 1 3779 210 52 20 chr17_random 199902 200302 -451287 + L1PA16 LINE L1 5771 6157 -9 883 268 11 51 chr17_random 200313 200533 -451056 - AluJo SINE Alu -37 275 90 1875 138 144 6 chr17_random 200533 200853 -450736 + THE1B LTR MaLR 1 364 0 883 268 11 51 chr17_random 200853 200916 -450673 - AluJo SINE Alu -222 90 26 1331 266 48 36 chr17_random 200916 201673 -449916 + L1MB1 LINE L1 922 1687 -4697 1271 181 8 25 chr17_random 202045 202282 -449307 + AluJb SINE Alu 73 305 -7 2062 89 0 77 chr17_random 202420 202757 -448832 + AluY SINE Alu 1 311 0 22 0 0 0 chr17_random 202798 202820 -448769 + AT_rich Low_complexity Low_complexity 1 22 0 542 288 55 20 chr17_random 203034 203534 -448055 + L1MB1 LINE L1 2602 3119 -3263 1197 260 21 32 chr17_random 203556 203614 -447975 + L1MB1 LINE L1 4770 4827 -1555 2055 129 30 0 chr17_random 203614 203916 -447673 - AluSp SINE Alu -2 311 1 1197 260 21 32 chr17_random 203916 204322 -447267 + L1MB1 LINE L1 4827 5229 -1153 1743 181 0 13 chr17_random 204322 204620 -446969 + AluSc SINE Alu 1 294 -15 1796 202 55 13 chr17_random 204634 205110 -446479 - L1 LINE L1 -1743 4403 3908 2183 109 22 20 chr17_random 205141 205499 -446090 + MLT2A1 LTR ERVL 1 359 -85 3218 236 42 13 chr17_random 205514 206554 -445035 + L1MA6 LINE L1 4403 5518 -782 180 0 0 0 chr17_random 206554 206574 -445015 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 3218 236 42 13 chr17_random 206574 207218 -444371 + L1MA6 LINE L1 5518 6141 -159 1160 251 53 0 chr17_random 207226 207489 -444100 + AluJo SINE Alu 11 287 -25 408 217 112 25 chr17_random 207512 207673 -443916 + L1MA6 LINE L1 6125 6299 -1 241 293 10 10 chr17_random 207665 207764 -443825 + L1MB1 LINE L1 5228 5326 -1056 * 566 260 117 20 chr17_random 207852 208144 -443445 + L1MB1 LINE L1 5898 6261 -146 4012 139 23 110 chr17_random 208144 208733 -442856 - LTR25 LTR ERV1 0 794 304 2023 130 19 0 chr17_random 208733 209040 -442549 - AluSp SINE Alu 0 313 1 4012 139 23 110 chr17_random 209040 209320 -442269 - LTR25 LTR ERV1 -490 304 1 566 260 117 20 chr17_random 209320 209424 -442165 + L1MB1 LINE L1 6261 6354 -53 10549 187 19 12 chr17_random 209640 209686 -441903 + L1PA11 LINE L1 2995 3039 -3135 1655 213 0 10 chr17_random 209686 209991 -441598 + AluSx SINE Alu 1 302 -10 10549 187 19 12 chr17_random 209991 210598 -440991 + L1PA11 LINE L1 3039 3641 -2533 216 0 0 0 chr17_random 210598 210622 -440967 + (CAA)n Simple_repeat Simple_repeat 3 26 0 10549 187 19 12 chr17_random 210622 213092 -438497 + L1PA11 LINE L1 3641 6171 -3 251 73 0 0 chr17_random 213100 213141 -438448 + L1PA11 LINE L1 6131 6171 -3 213 94 0 0 chr17_random 214988 215020 -436569 + (A)n Simple_repeat Simple_repeat 1 32 0 2324 75 7 0 chr17_random 215354 215648 -435941 - AluY SINE Alu -15 296 1 1109 311 26 7 chr17_random 216235 216653 -434936 + L1M3a LINE L1 2 427 -5528 774 254 5 3 chr17_random 216898 217116 -434473 + AluJb SINE Alu 5 290 -22 1038 261 97 25 chr17_random 217268 217628 -433961 + MSTD LTR MaLR 11 396 0 780 282 46 0 chr17_random 217655 217978 -433611 + L1M3a LINE L1 2101 2438 -3596 913 267 35 62 chr17_random 218190 218564 -433025 + MER93a LTR ERV1 1 364 -38 5484 114 5 36 chr17_random 219256 220075 -431514 - L1PA8 LINE L1 0 6172 5329 690 47 0 0 chr17_random 220075 220161 -431428 + (TTC)n Simple_repeat Simple_repeat 3 88 0 5484 114 5 36 chr17_random 220161 220196 -431393 - L1PA8 LINE L1 -843 5329 5294 1609 168 0 7 chr17_random 220196 220476 -431113 - AluSg SINE Alu -31 279 2 5484 114 5 36 chr17_random 220476 221162 -430427 - L1PA8 LINE L1 -878 5294 4679 370 175 0 0 chr17_random 221924 221987 -429602 - AluJ/FRAM SINE Alu -14 288 226 1092 248 46 8 chr17_random 222023 222285 -429304 + AluJo SINE Alu 2 273 -39 192 40 0 0 chr17_random 222287 222312 -429277 + (TG)n Simple_repeat Simple_repeat 2 26 0 506 184 112 0 chr17_random 224070 224168 -427421 - FRAM SINE Alu -37 139 31 315 0 0 0 chr17_random 228508 228543 -423046 + (CA)n Simple_repeat Simple_repeat 2 36 0 236 284 136 12 chr17_random 228555 228636 -422953 + L2 LINE L2 2726 2816 -498 23 0 0 0 chr17_random 228922 228945 -422644 + AT_rich Low_complexity Low_complexity 1 23 0 28 0 0 0 chr17_random 229269 229297 -422292 + AT_rich Low_complexity Low_complexity 1 28 0 1705 177 28 0 chr17_random 230339 230627 -420962 - AluSx SINE Alu -16 296 1 1687 242 23 0 chr17_random 230645 231129 -420460 - L1MB2 LINE L1 -3 6168 5674 688 270 48 16 chr17_random 231134 231449 -420140 - L1MB2 LINE L1 -1305 4841 4517 331 212 30 20 chr17_random 231454 231553 -420036 - L1MB2 LINE L1 -3263 2883 2784 210 71 0 0 chr17_random 232256 232284 -419305 + (A)n Simple_repeat Simple_repeat 1 28 0 1546 219 0 3 chr17_random 233277 233564 -418025 + AluSx SINE Alu 5 290 -22 262 158 45 15 chr17_random 233564 233697 -417892 + (TA)n Simple_repeat Simple_repeat 2 138 0 657 303 66 19 chr17_random 234421 234738 -416851 - MLT1A1 LTR MaLR -11 354 23 243 280 0 0 chr17_random 234821 234896 -416693 + CT-rich Low_complexity Low_complexity 2 76 0 506 281 99 57 chr17_random 234912 235223 -416366 + MLT1E LTR MaLR 221 542 -25 233 29 0 29 chr17_random 236725 236760 -414829 + (TG)n Simple_repeat Simple_repeat 1 34 0 191 273 91 33 chr17_random 236882 237003 -414586 + MIR SINE MIR 26 153 -55 267 103 0 0 chr17_random 237352 237391 -414198 + (T)n Simple_repeat Simple_repeat 1 39 0 1786 169 10 7 chr17_random 237465 237760 -413829 + AluSx SINE Alu 1 296 -16 231 36 0 0 chr17_random 237760 237788 -413801 + (GA)n Simple_repeat Simple_repeat 2 29 0 777 295 63 30 chr17_random 237912 239131 -412458 + L1ME LINE L1 4561 5817 -345 494 184 64 120 chr17_random 239191 239425 -412164 + L1 LINE L1 4127 4347 -1799 1249 215 17 37 chr17_random 240920 241218 -410371 + AluJo SINE Alu 1 292 -20 39 0 0 0 chr17_random 242737 242776 -408813 + AT_rich Low_complexity Low_complexity 1 39 0 310 317 75 19 chr17_random 242845 243006 -408583 - L1MEd LINE L1 -5025 1094 925 1036 313 21 27 chr17_random 243868 244428 -407161 + MER76 LTR ERV 130 686 -2 418 319 55 45 chr17_random 246271 246675 -404914 + L1ME4a LINE L1 5713 6120 -1 25 53 0 18 chr17_random 247054 247091 -404498 + AT_rich Low_complexity Low_complexity 1 38 -18 1700 201 7 0 chr17_random 247091 247379 -404210 + AluSx SINE Alu 1 290 -22 25 53 0 18 chr17_random 247379 247398 -404191 + AT_rich Low_complexity Low_complexity 38 56 0 1237 216 20 37 chr17_random 248059 248356 -403233 - AluJo SINE Alu -10 292 1 376 218 60 115 chr17_random 249850 250084 -401505 - L1 LINE L1 -1799 4347 4127 782 279 63 29 chr17_random 250144 250586 -401003 - L1ME LINE L1 -345 5817 5365 762 312 65 26 chr17_random 250615 251356 -400233 - L1ME LINE L1 -816 5330 4561 203 183 0 56 chr17_random 251367 251438 -400151 + A-rich Low_complexity Low_complexity 3 69 0 213 39 0 0 chr17_random 251506 251532 -400057 + (TC)n Simple_repeat Simple_repeat 2 27 0 1707 176 3 3 chr17_random 251532 251822 -399767 - AluSx SINE Alu -22 290 1 234 174 0 0 chr17_random 251896 251942 -399647 + A-rich Low_complexity Low_complexity 1 46 0 233 29 29 0 chr17_random 252535 252569 -399020 + (CA)n Simple_repeat Simple_repeat 2 36 0 501 290 104 65 chr17_random 254052 254385 -397204 - MLT1E LTR MaLR -3 564 221 263 276 0 0 chr17_random 254403 254479 -397110 + GA-rich Low_complexity Low_complexity 2 77 0 725 313 69 19 chr17_random 254555 254875 -396714 + MLT1A1 LTR MaLR 19 354 -11 362 150 33 0 chr17_random 255656 255776 -395813 + (TA)n Simple_repeat Simple_repeat 1 124 0 1582 205 3 3 chr17_random 255776 256064 -395525 - AluSx SINE Alu -24 288 1 347 222 30 20 chr17_random 257760 257859 -393730 + L1MB2 LINE L1 2784 2883 -3263 801 272 44 16 chr17_random 257864 258180 -393409 + L1MB2 LINE L1 4517 4841 -1305 1937 237 21 0 chr17_random 258185 258670 -392919 + L1MB2 LINE L1 5674 6168 -3 1639 189 27 0 chr17_random 258688 258984 -392605 + AluSx SINE Alu 1 304 -8 40 21 0 0 chr17_random 260023 260070 -391519 + AT_rich Low_complexity Low_complexity 1 47 0 238 288 150 0 chr17_random 260686 260766 -390823 - L2 LINE L2 -498 2816 2725 516 194 112 0 chr17_random 265120 265218 -386371 + FRAM SINE Alu 31 139 -37 1184 232 0 4 chr17_random 266998 267248 -384341 - AluJo SINE Alu -62 250 2 382 191 0 0 chr17_random 267284 267347 -384242 + AluJ/FRAM SINE Alu 226 288 -14 204 263 40 26 chr17_random 268026 268102 -383487 + MIR SINE MIR 54 130 -78 6203 112 11 25 chr17_random 268108 268788 -382801 + L1PA8 LINE L1 4679 5367 -805 1708 180 0 3 chr17_random 268788 269222 -382367 + AluSg SINE Alu 1 433 0 6203 112 11 25 chr17_random 269222 270045 -381544 + L1PA8 LINE L1 5367 6172 0 1266 279 32 27 chr17_random 270725 271098 -380491 - MER93a LTR ERV1 -27 375 1 876 299 39 3 chr17_random 271310 271665 -379924 - L1 LINE L1 -3596 2438 2071 1164 249 126 25 chr17_random 271666 272024 -379565 - MSTD LTR MaLR 0 396 3 865 220 7 0 chr17_random 272168 272318 -379271 - AluJb SINE Alu -22 290 140 1174 306 34 14 chr17_random 272636 273054 -378535 - L1 LINE L1 -5528 427 2 2309 106 0 0 chr17_random 273642 273945 -377644 + AluY SINE Alu 1 303 -8 2900 145 99 94 chr17_random 275366 276682 -374907 - pTR5 LTR ERV1 0 2438 742 228 105 0 0 chr17_random 277482 277520 -374069 - L1PA11 LINE L1 -6 6168 6131 10737 173 32 17 chr17_random 277528 280004 -371585 - L1PA11 LINE L1 -4 6170 3731 189 0 0 0 chr17_random 280004 280025 -371564 + (TTG)n Simple_repeat Simple_repeat 3 23 0 10737 173 32 17 chr17_random 280025 280637 -370952 - L1PA11 LINE L1 -2443 3731 3039 1654 186 17 7 chr17_random 280637 280933 -370656 - AluSx SINE Alu -13 299 1 10737 173 32 17 chr17_random 280933 280979 -370610 - L1PA11 LINE L1 -3135 3039 2995 1707 164 14 14 chr17_random 281299 281585 -370004 + LTR25 LTR ERV1 1 286 -508 1881 102 64 0 chr17_random 281589 281876 -369713 + AluSp SINE Alu 3 306 0 2991 142 28 70 chr17_random 281920 282490 -369099 + LTR25 LTR ERV1 249 794 0 770 267 60 4 chr17_random 282511 282792 -368797 - L1MB3 LINE L1 -225 6194 5898 311 341 18 12 chr17_random 282818 282985 -368604 - L1MB3 LINE L1 -994 5388 5221 * 3670 237 35 32 chr17_random 282971 283151 -368438 - L1MA6 LINE L1 -3 6297 6119 1212 246 51 0 chr17_random 283151 283427 -368162 - AluJo SINE Alu -22 290 1 3670 237 35 32 chr17_random 283427 285127 -366462 - L1MA6 LINE L1 -181 6119 4406 2284 119 23 9 chr17_random 285144 285487 -366102 - MLT2A1 LTR ERVL -85 359 12 1920 196 54 13 chr17_random 285493 285956 -365633 + L1 LINE L1 3921 4402 -1744 1819 158 3 14 chr17_random 285970 286267 -365322 - AluSc SINE Alu -15 294 1 1364 257 21 43 chr17_random 286267 286678 -364911 - L1MB3 LINE L1 -1153 5229 4828 2063 121 30 0 chr17_random 286678 286975 -364614 + AluSp SINE Alu 6 311 -2 1364 257 21 43 chr17_random 286975 287033 -364556 - L1MB3 LINE L1 -1554 4828 4770 529 323 55 14 chr17_random 287054 287469 -364120 - L1MB3 LINE L1 -3262 3120 2689 308 173 19 19 chr17_random 287471 287575 -364014 + (TTG)n Simple_repeat Simple_repeat 3 106 0 361 276 52 48 chr17_random 287715 287867 -363722 - L1MB3 LINE L1 -3913 2471 2316 1959 116 0 39 chr17_random 287867 288177 -363412 - AluY SINE Alu -13 298 1 361 276 52 48 chr17_random 288177 288314 -363275 - L1MB3 LINE L1 -4068 2316 2181 1089 196 13 26 chr17_random 288316 288545 -363044 - AluJb SINE Alu -14 298 73 303 301 84 7 chr17_random 288593 288736 -362853 - L1MB3 LINE L1 -4258 2126 1973 1743 276 46 34 chr17_random 288762 289678 -361911 - L1MB3 LINE L1 -4449 1933 925 299 283 0 0 chr17_random 289678 289738 -361851 + AluSg/x SINE Alu 132 191 -109 1229 162 79 19 chr17_random 289744 290064 -361525 - THE1B LTR MaLR 0 355 1 754 286 14 32 chr17_random 290064 290284 -361305 + AluJo SINE Alu 60 275 -37 4039 205 46 12 chr17_random 290295 290687 -360902 - L1PA16 LINE L1 -9 6157 5780 1915 160 0 3 chr17_random 290687 290981 -360608 + AluSc SINE Alu 1 293 -16 4039 205 46 12 chr17_random 290981 291522 -360067 - L1PA16 LINE L1 -386 5780 5204 1530 271 138 10 chr17_random 291499 292193 -359396 - L1PA16 LINE L1 -3017 3129 2347 * 869 286 50 40 chr17_random 292210 292507 -359082 + AluJo SINE Alu 3 302 0 249 308 41 9 chr17_random 292532 292751 -358838 - L1M3c LINE L1 -5001 1133 917 25 0 0 0 chr17_random 293326 293351 -358238 + AT_rich Low_complexity Low_complexity 1 25 0 15782 117 10 2 chr17_random 293731 296767 -354822 - L1PA7 LINE L1 -122 6032 2974 362 252 112 48 chr17_random 299056 299228 -352361 - MLT1E LTR MaLR -4 589 369 2054 136 3 3 chr17_random 299513 299821 -351768 + AluSq SINE Alu 5 312 -1 756 307 59 13 chr17_random 299874 300177 -351412 + MLT1A1 LTR MaLR 38 354 -11 259 204 163 41 chr17_random 300593 300691 -350898 + LTR45B LTR ERV1 354 463 -26 1283 202 151 27 chr17_random 300832 301164 -350425 - THE1C LTR MaLR 0 375 3 183 253 147 21 chr17_random 301164 301259 -350330 - MIR3 SINE MIR -16 192 86 2881 13 0 0 chr17_random 301386 301698 -349891 - AluYb8 SINE Alu -6 312 1 210 320 23 23 chr17_random 301700 301828 -349761 - MIR SINE MIR -62 200 73 285 189 0 0 chr17_random 302634 302818 -348771 - Alu SINE Alu 0 425 242 180 111 0 0 chr17_random 303759 303786 -347803 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1336 199 77 35 chr17_random 303804 304090 -347499 - AluJo SINE Alu -5 307 10 701 209 29 67 chr17_random 304157 304293 -347296 - MER67C LTR ERV1 -477 233 108 1274 239 0 60 chr17_random 304293 304435 -347154 + AluJb SINE Alu 1 118 -194 1743 157 3 28 chr17_random 304435 304769 -346820 + AluSg SINE Alu 1 327 0 1274 239 0 60 chr17_random 304769 304937 -346652 + AluJb SINE Alu 118 295 -17 701 209 29 67 chr17_random 304937 305039 -346550 - MER67C LTR ERV1 -602 108 4 582 279 56 39 chr17_random 305830 306135 -345454 - MER21B LTR ERV1 -150 713 404 837 267 81 47 chr17_random 306138 306647 -344942 + MER92B LTR ERV1 33 558 -78 2054 151 3 0 chr17_random 307052 307363 -344226 + AluSp SINE Alu 1 312 -1 188 339 27 36 chr17_random 307951 308063 -343526 - MIR SINE MIR -123 139 29 240 35 0 0 chr17_random 308698 308727 -342862 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 256 135 19 0 chr17_random 309541 309593 -341996 - Charlie5 DNA MER1_type -2 2610 2558 1230 223 14 47 chr17_random 309605 309901 -341688 + AluJb SINE Alu 3 288 -24 340 274 46 46 chr17_random 310089 310264 -341325 + MER5B DNA MER1_type 1 175 -3 429 268 49 49 chr17_random 311028 311192 -340397 - MER5B DNA MER1_type -14 164 1 1276 216 3 40 chr17_random 311380 311677 -339912 - AluJb SINE Alu -24 288 3 251 259 0 0 chr17_random 312175 312233 -339356 - MER93a LTR ERV1 -344 58 1 189 321 27 36 chr17_random 313215 313327 -338262 + MIR SINE MIR 29 139 -123 1959 145 3 13 chr17_random 313909 314219 -337370 - AluSp SINE Alu -6 307 1 1036 229 84 60 chr17_random 314628 315140 -336449 - MER92B LTR ERV1 -80 556 33 697 271 56 30 chr17_random 315143 315445 -336144 + MER21B LTR ERV1 404 713 -150 573 218 12 103 chr17_random 316241 316355 -335234 + MER67C LTR ERV1 5 85 -625 1175 278 0 24 chr17_random 316355 316511 -335078 - AluJb SINE Alu -14 288 141 1908 158 0 25 chr17_random 316511 316828 -334761 - AluSg SINE Alu -1 309 1 1175 278 0 24 chr17_random 316828 316966 -334623 - AluJb SINE Alu -161 141 1 573 218 12 103 chr17_random 316966 317103 -334486 + MER67C LTR ERV1 85 233 -477 1365 196 77 35 chr17_random 317170 317455 -334134 + AluJo SINE Alu 10 306 -6 317 125 36 0 chr17_random 318433 318489 -333100 + Alu SINE Alu 243 300 -1 1315 38 25 12 chr17_random 318492 318731 -332858 + (GAAA)n Simple_repeat Simple_repeat 2 243 0 186 43 0 0 chr17_random 318735 318758 -332831 + (GAAAA)n Simple_repeat Simple_repeat 2 24 0 192 353 22 37 chr17_random 319551 319687 -331902 + MIR SINE MIR 73 206 -56 1107 205 151 27 chr17_random 319890 320222 -331367 + THE1C LTR MaLR 3 375 0 743 303 42 10 chr17_random 320875 321182 -330407 - MLT1A1 LTR MaLR -11 354 38 1957 142 10 3 chr17_random 321215 321518 -330071 - AluSq SINE Alu -4 309 5 499 289 129 18 chr17_random 321652 321975 -329614 + MLT1E LTR MaLR 225 546 -9 14487 115 6 2 chr17_random 324269 327315 -324274 + L1PA7 LINE L1 2974 6032 -122 24 0 0 0 chr17_random 327692 327716 -323873 + AT_rich Low_complexity Low_complexity 1 24 0 228 262 48 0 chr17_random 328396 328480 -323109 + L1M3e LINE L1 1942 2029 -5001 962 273 37 27 chr17_random 328504 328801 -322788 - AluJo SINE Alu 0 302 3 1725 302 12 5 chr17_random 328820 329595 -321994 + L1M3e LINE L1 3310 4089 -3017 * 3406 208 53 19 chr17_random 329579 330108 -321481 + L1PA16 LINE L1 5210 5773 -393 2054 122 0 10 chr17_random 330108 330403 -321186 - AluSc SINE Alu -17 292 1 3406 208 53 19 chr17_random 330403 330802 -320787 + L1PA16 LINE L1 5773 6157 -9 763 292 14 46 chr17_random 330813 331032 -320557 - AluJo SINE Alu -37 275 65 1749 131 144 6 chr17_random 331032 331352 -320237 + THE1B LTR MaLR 1 364 0 763 292 14 46 chr17_random 331352 331416 -320173 - AluJo SINE Alu -247 65 1 1321 266 48 36 chr17_random 331416 332172 -319417 + L1M4c LINE L1 923 1687 -4697 1271 181 8 25 chr17_random 332544 332781 -318808 + AluJb SINE Alu 73 305 -7 2062 89 0 77 chr17_random 332919 333256 -318333 + AluY SINE Alu 1 311 0 22 0 0 0 chr17_random 333297 333319 -318270 + AT_rich Low_complexity Low_complexity 1 22 0 268 152 33 22 chr17_random 333523 333615 -317974 + (CAA)n Simple_repeat Simple_repeat 3 95 0 482 291 52 14 chr17_random 333617 333985 -317604 + L1M4c LINE L1 2682 3063 -3319 391 135 0 125 chr17_random 334054 334112 -317477 + L1 LINE L1 4534 4575 -1571 2055 129 30 0 chr17_random 334112 334414 -317175 - AluSp SINE Alu -2 311 1 391 135 0 125 chr17_random 334414 334459 -317130 + L1 LINE L1 4575 4624 -1522 2643 245 50 8 chr17_random 334651 335595 -315994 - L1 LINE L1 -758 5388 4406 2210 119 23 8 chr17_random 335612 335966 -315623 - MLT2A1 LTR ERVL -85 359 1 623 193 14 0 chr17_random 335997 336137 -315452 + L1M4c LINE L1 4144 4285 -2097 745 133 0 0 chr17_random 336412 336517 -315072 - AluSq/x SINE Alu -195 117 13 479 303 68 25 chr17_random 339152 339433 -312156 + L1M4c LINE L1 4651 4943 -1439 1076 237 132 9 chr17_random 339529 339854 -311735 - MLT1A1 LTR MaLR 0 365 1 273 265 0 0 chr17_random 341884 341952 -309637 - HERVL40 LTR ERVL -1935 3595 3528 339 262 74 8 chr17_random 341957 342079 -309510 - HERVL40 LTR ERVL -2103 3427 3298 648 278 37 23 chr17_random 342149 342365 -309224 - HERVL40 LTR ERVL -2370 3160 2942 347 307 85 0 chr17_random 342370 342546 -309043 - HERVL40 LTR ERVL -2760 2770 2580 546 277 76 22 chr17_random 342684 342998 -308591 - L1M4 LINE L1 -5752 790 460 3009 271 102 25 chr17_random 343085 344523 -307066 + L1MB3 LINE L1 2277 3913 -2233 613 140 10 0 chr17_random 344523 344623 -306966 + HY3 scRNA scRNA 1 101 0 3009 271 102 25 chr17_random 344623 345174 -306415 + L1MB3 LINE L1 3913 4420 -1726 2921 241 65 26 chr17_random 345187 346605 -304984 + L1MB3 LINE L1 4600 6182 -1 352 344 16 0 chr17_random 346613 346735 -304854 + L1MB7 LINE L1 5816 5939 -245 396 299 43 13 chr17_random 346904 347194 -304395 + L1ME LINE L1 495 804 -5266 3407 64 0 7 chr17_random 347214 347665 -303924 - LTR7 LTR ERV1 -2 448 1 328 221 149 77 chr17_random 347716 347897 -303692 + LTR4 LTR ERV1 7 200 -396 425 246 23 74 chr17_random 348113 348258 -303331 + LTR4 LTR ERV1 392 524 -72 2601 89 119 7 chr17_random 348258 348661 -302928 - LTR7 LTR ERV1 -2 448 1 425 246 23 74 chr17_random 348661 348730 -302859 + LTR4 LTR ERV1 524 595 -1 1762 141 15 0 chr17_random 352410 352679 -298910 + LTR43 LTR ERV1 121 393 -209 1608 260 28 30 chr17_random 352794 353411 -298178 + LTR43-int LTR ERV1 553 2205 -3822 295 250 0 0 chr17_random 353964 354024 -297565 + LTR43-int LTR ERV1 3833 3892 -906 * 2840 231 43 18 chr17_random 354020 354678 -296911 + LTR43-int LTR ERV1 4125 4798 0 3205 161 25 33 chr17_random 354678 354904 -296685 + LTR43 LTR ERV1 1 227 -375 1637 202 0 0 chr17_random 354904 355201 -296388 + AluSx SINE Alu 1 297 -15 3205 161 25 33 chr17_random 355201 355581 -296008 + LTR43 LTR ERV1 227 602 0 554 274 4 40 chr17_random 355581 356248 -295341 + BSR/Beta Satellite Satellite 1 643 -63 1242 274 11 25 chr17_random 356271 356638 -294951 - BSR/Beta Satellite Satellite -1 361 1 742 188 4 38 chr17_random 356764 357206 -294383 - BSR/Beta Satellite Satellite 0 426 1 655 259 26 29 chr17_random 357219 358073 -293516 - BSR/Beta Satellite Satellite -15 851 1 280 329 20 10 chr17_random 358102 358279 -293310 - BSR/Beta Satellite Satellite 0 178 1 412 299 43 12 chr17_random 358328 358697 -292892 - BSR/Beta Satellite Satellite 0 380 1 * 725 251 18 31 chr17_random 358572 359746 -291843 - BSR/Beta Satellite Satellite -45 1157 1 547 259 57 42 chr17_random 359863 360125 -291464 + L1MEd LINE L1 987 1252 -4867 1161 162 63 32 chr17_random 360831 361084 -290505 - THE1C LTR MaLR 0 375 115 30 45 0 0 chr17_random 361714 361758 -289831 + AT_rich Low_complexity Low_complexity 1 44 0 232 185 56 0 chr17_random 362048 362102 -289487 + (CATATA)n Simple_repeat Simple_repeat 4 60 0 394 140 58 6 chr17_random 362112 362283 -289306 + (TA)n Simple_repeat Simple_repeat 1 180 0 502 230 29 46 chr17_random 362525 362699 -288890 - LTR4 LTR ERV1 -41 555 385 315 195 53 88 chr17_random 362979 363092 -288497 - LTR4 LTR ERV1 -481 115 7 435 283 80 45 chr17_random 363152 363488 -288101 - L1ME LINE L1 -5261 809 462 343 322 37 5 chr17_random 363989 364139 -287450 - BSR/Beta Satellite Satellite 0 154 1 1364 237 28 35 chr17_random 364224 366885 -284704 - BSR/Beta Satellite Satellite 0 2642 1 895 248 13 23 chr17_random 367048 368559 -283030 + BSR/Beta Satellite Satellite 1 1496 0 1530 265 21 21 chr17_random 368571 369677 -281912 - BSR/Beta Satellite Satellite -7 1106 1 230 323 92 0 chr17_random 369741 369871 -281718 - BSR/Beta Satellite Satellite -10 142 1 * 588 258 33 35 chr17_random 369757 370212 -281377 - BSR/Beta Satellite Satellite -27 453 1 662 255 13 23 chr17_random 370225 370697 -280892 - BSR/Beta Satellite Satellite 0 467 1 * 2288 107 83 0 chr17_random 370695 371032 -280557 - LTR66 LTR ERVL -245 365 1 5239 116 11 9 chr17_random 371032 372435 -279154 - HERVL66 LTR ERVL 0 4329 2654 * 11375 113 9 2 chr17_random 372415 374015 -277574 - HERVL66 LTR ERVL -2532 1797 187 3570 84 88 0 chr17_random 374015 374517 -277072 - LTR66 LTR ERVL -62 548 3 216 0 0 0 chr17_random 374658 374682 -276907 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 599 213 0 0 chr17_random 374682 374790 -276799 - FLAM_C SINE Alu -25 118 11 202 246 16 0 chr17_random 375006 375067 -276522 + (TA)n Simple_repeat Simple_repeat 1 62 0 643 274 106 25 chr17_random 375074 375362 -276227 + L1 LINE L1 2447 2710 -3436 15318 104 3 0 chr17_random 375362 378355 -273234 + L1PA6 LINE L1 3141 6146 -8 643 274 106 25 chr17_random 378355 378740 -272849 + L1 LINE L1 2710 4808 -1338 26 30 0 0 chr17_random 379998 380031 -271558 + AT_rich Low_complexity Low_complexity 1 33 0 2275 92 0 10 chr17_random 380309 380615 -270974 - AluY SINE Alu -8 303 1 832 169 8 0 chr17_random 380623 380753 -270836 - AluSg SINE Alu -179 131 1 21 0 0 0 chr17_random 380753 380774 -270815 + AT_rich Low_complexity Low_complexity 1 21 0 1297 117 10 5 chr17_random 382000 382196 -269393 + MER107 DNA MER1_type 1 197 0 265 289 0 0 chr17_random 382702 382792 -268797 + L1M4c LINE L1 800 889 -5495 5233 192 14 11 chr17_random 384516 385774 -265815 - L1P4 LINE L1 -634 5527 4271 1253 182 12 35 chr17_random 387076 387334 -264255 - AluSg SINE Alu -58 252 1 449 321 0 0 chr17_random 387341 387472 -264117 - FLAM_C SINE Alu -2 131 1 490 244 0 9 chr17_random 387494 387609 -263980 + MER67C LTR ERV1 120 233 -477 1287 197 81 35 chr17_random 387676 387960 -263629 + AluJo SINE Alu 10 306 -6 426 331 10 7 chr17_random 388616 388819 -262770 - MER66-int LTR ERV1 -5064 1612 1435 1389 293 16 14 chr17_random 388825 389255 -262334 - MER66-int LTR ERV1 -3819 979 549 610 268 102 60 chr17_random 390338 390651 -260938 - MLT1E LTR MaLR -23 544 221 251 27 0 27 chr17_random 391227 391264 -260325 + (TG)n Simple_repeat Simple_repeat 1 36 0 196 219 122 37 chr17_random 391425 391507 -260082 + MIR SINE MIR 65 153 -55 218 162 0 0 chr17_random 391849 391886 -259703 + T-rich Low_complexity Low_complexity 1 37 0 1700 179 14 7 chr17_random 391960 392257 -259332 + AluSx SINE Alu 1 299 -13 231 36 0 0 chr17_random 392257 392285 -259304 + (GA)n Simple_repeat Simple_repeat 2 29 0 22 35 0 0 chr17_random 392487 392516 -259073 + AT_rich Low_complexity Low_complexity 1 29 0 1512 220 0 3 chr17_random 394293 394579 -257010 + AluSx SINE Alu 5 289 -23 280 156 44 15 chr17_random 394579 394714 -256875 + (TA)n Simple_repeat Simple_repeat 1 139 0 1038 216 9 26 chr17_random 398092 398324 -253265 - AluJb SINE Alu -7 305 78 1701 270 51 39 chr17_random 398548 399466 -252123 - L1M1 LINE L1 -4449 1933 923 839 274 14 49 chr17_random 399466 399530 -252059 + AluJo SINE Alu 1 66 -246 1609 166 144 6 chr17_random 399530 399850 -251739 - THE1B LTR MaLR 0 364 1 839 274 14 49 chr17_random 399850 400070 -251519 + AluJo SINE Alu 66 275 -37 1680 225 43 3 chr17_random 400081 400472 -251117 - L1PA16 LINE L1 -9 6157 5751 2012 143 0 3 chr17_random 400473 400767 -250822 + AluSc SINE Alu 1 293 -16 466 119 0 0 chr17_random 400885 400952 -250637 + L1PA7 LINE L1 5965 6031 -123 25 0 0 0 chr17_random 401333 401358 -250231 + AT_rich Low_complexity Low_complexity 1 25 0 235 256 49 0 chr17_random 402070 402152 -249437 + L1M3e LINE L1 1944 2029 -5001 691 295 28 42 chr17_random 402172 402457 -249132 - AluJo SINE Alu -1 311 31 974 290 19 11 chr17_random 402492 402854 -248735 + L1M3e LINE L1 3306 3670 -3436 823 273 34 12 chr17_random 402861 403187 -248402 + L1M3e LINE L1 3757 4089 -3017 * 2389 200 54 2 chr17_random 403164 403702 -247887 + L1P4 LINE L1 6164 6719 -407 1506 187 0 7 chr17_random 403703 403976 -247613 - AluSc SINE Alu -17 292 22 390 241 59 114 chr17_random 405108 405345 -246244 - L1 LINE L1 -1799 4347 4124 900 302 68 37 chr17_random 405402 406638 -244951 - L1M3 LINE L1 -364 5816 4544 195 42 0 0 chr17_random 406771 406795 -244794 + (TC)n Simple_repeat Simple_repeat 2 25 0 1783 164 14 3 chr17_random 406795 407088 -244501 - AluSx SINE Alu -16 296 1 234 174 0 0 chr17_random 407162 407208 -244381 + A-rich Low_complexity Low_complexity 1 46 0 29 60 0 0 chr17_random 408001 408051 -243538 + GC_rich Low_complexity Low_complexity 1 50 0 213 121 0 0 chr17_random 408154 408187 -243402 + (AGGGGG)n Simple_repeat Simple_repeat 3 35 0 13859 125 9 9 chr17_random 408923 411175 -240414 + L1P LINE L1 2974 5224 -922 476 194 112 0 chr17_random 415608 415706 -235883 + FRAM SINE Alu 31 139 -37 192 40 0 0 chr17_random 417461 417486 -234103 + (CA)n Simple_repeat Simple_repeat 2 26 0 1029 252 46 8 chr17_random 417488 417750 -233839 - AluJo SINE Alu -39 273 2 399 175 0 0 chr17_random 417786 417849 -233740 + AluJ/FRAM SINE Alu 226 288 -14 25 0 0 0 chr17_random 417982 418007 -233582 + AT_rich Low_complexity Low_complexity 1 25 0 4178 136 4 1 chr17_random 418612 419297 -232292 + L1P LINE L1 4679 5365 -781 1057 214 8 15 chr17_random 419298 419564 -232025 + AluSq SINE Alu 2 265 -48 8554 222 28 13 chr17_random 469571 471719 -179870 - L1M3 LINE L1 -1764 4382 2202 273 197 0 0 chr17_random 471850 471926 -179663 + GA-rich Low_complexity Low_complexity 2 77 0 663 188 0 0 chr17_random 471945 472121 -179468 + GA-rich Low_complexity Low_complexity 2 177 0 668 182 6 0 chr17_random 472140 472316 -179273 + GA-rich Low_complexity Low_complexity 2 178 0 648 196 0 0 chr17_random 472356 472535 -179054 + GA-rich Low_complexity Low_complexity 2 180 0 435 202 0 0 chr17_random 472567 472696 -178893 + GA-rich Low_complexity Low_complexity 2 130 0 1508 132 0 27 chr17_random 472736 472766 -178823 - AluSg SINE Alu 0 310 281 462 18 0 0 chr17_random 472766 472821 -178768 + (TATG)n Simple_repeat Simple_repeat 2 56 0 1508 132 0 27 chr17_random 472821 473048 -178541 - AluSg SINE Alu -29 281 60 315 91 0 0 chr17_random 473181 473225 -178364 - AluSp/q SINE Alu -20 283 240 1568 146 44 14 chr17_random 473330 473624 -177965 + AluSx SINE Alu 10 312 0 683 71 10 0 chr17_random 473721 473819 -177770 + (TC)n Simple_repeat Simple_repeat 2 100 0 767 244 4 67 chr17_random 473829 474099 -177490 - L1PA13 LINE L1 -11 6152 5900 510 168 15 79 chr17_random 474296 474441 -177148 - MER39B LTR ERV1 -242 411 298 669 181 0 0 chr17_random 474489 474666 -176923 + GA-rich Low_complexity Low_complexity 2 178 0 240 200 0 0 chr17_random 474655 474705 -176884 + (CAGG)n Simple_repeat Simple_repeat 2 51 0 * 627 180 0 0 chr17_random 474737 474887 -176702 + GA-rich Low_complexity Low_complexity 1 150 0 756 173 0 0 chr17_random 474931 475110 -176479 + GA-rich Low_complexity Low_complexity 2 180 0 774 153 4 0 chr17_random 475165 475414 -176175 + GA-rich Low_complexity Low_complexity 1 250 0 495 207 0 0 chr17_random 475462 475607 -175982 + GA-rich Low_complexity Low_complexity 2 146 0 860 140 0 6 chr17_random 475639 475817 -175772 + (GA)n Simple_repeat Simple_repeat 2 178 0 807 161 0 0 chr17_random 475860 476040 -175549 + GA-rich Low_complexity Low_complexity 1 180 0 240 86 0 0 chr17_random 476065 476100 -175489 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 693 170 0 0 chr17_random 476128 476293 -175296 + GA-rich Low_complexity Low_complexity 2 166 0 767 174 2 2 chr17_random 476334 476756 -174833 + GA-rich Low_complexity Low_complexity 1 422 0 514 148 0 50 chr17_random 476745 476927 -174662 + (CAGAGA)n Simple_repeat Simple_repeat 2 174 0 * 1517 138 0 16 chr17_random 476975 477002 -174587 - AluSg SINE Alu -1 309 283 660 119 0 0 chr17_random 477002 477111 -174478 + (TATG)n Simple_repeat Simple_repeat 2 110 0 1517 138 0 16 chr17_random 477111 477337 -174252 - AluSg SINE Alu -27 283 60 320 58 0 19 chr17_random 477430 477482 -174107 + (TTAG)n Simple_repeat Simple_repeat 2 52 0 295 114 0 0 chr17_random 477503 477547 -174042 - AluSp/q SINE Alu -20 283 240 1551 146 44 17 chr17_random 477652 477947 -173642 + AluSx SINE Alu 10 312 0 499 40 27 0 chr17_random 478046 478120 -173469 + (TC)n Simple_repeat Simple_repeat 1 76 0 832 230 4 63 chr17_random 478125 478395 -173194 - L1PA13 LINE L1 -10 6153 5900 213 224 17 17 chr17_random 478470 478528 -173061 + C-rich Low_complexity Low_complexity 3 60 0 210 71 0 0 chr17_random 478859 478887 -172702 + (CCTCG)n Simple_repeat Simple_repeat 4 31 0 585 0 0 0 chr17_random 478950 479015 -172574 + (GAAA)n Simple_repeat Simple_repeat 1 65 0 766 201 141 61 chr17_random 479056 479163 -172426 + AluJo SINE Alu 3 100 -202 1888 147 3 0 chr17_random 479163 479469 -172120 + AluSp SINE Alu 1 307 -6 766 201 141 61 chr17_random 479469 479624 -171965 + AluJo SINE Alu 100 286 -16 376 123 0 0 chr17_random 479692 479749 -171840 + AluJ/FLAM SINE Alu 4 60 -242 628 201 19 0 chr17_random 479749 479908 -171681 + GA-rich Low_complexity Low_complexity 3 164 0 483 189 71 31 chr17_random 479952 480079 -171510 - AluJb SINE Alu -51 261 130 1346 214 0 0 chr17_random 480094 480383 -171206 - AluSx SINE Alu -23 289 1 252 0 0 0 chr17_random 480544 480572 -171017 + (GA)n Simple_repeat Simple_repeat 1 28 0 250 227 15 0 chr17_random 481423 481489 -170100 + FLAM_A SINE Alu 41 107 -26 542 99 11 0 chr17_random 481520 481611 -169978 + (GGA)n Simple_repeat Simple_repeat 2 93 0 234 150 0 0 chr17_random 481603 481643 -169946 + (GAAAA)n Simple_repeat Simple_repeat 1 40 0 * 1429 145 4 4 chr17_random 481677 481918 -169671 + AluSp SINE Alu 69 309 -4 428 185 12 0 chr17_random 482019 482100 -169489 + AluJ/FLAM SINE Alu 15 96 -216 441 0 0 0 chr17_random 482215 482264 -169325 + (CAGG)n Simple_repeat Simple_repeat 2 50 0 589 164 0 35 chr17_random 482275 482391 -169198 + AluSq/x SINE Alu 1 112 -201 543 132 0 0 chr17_random 482401 482492 -169097 + (CA)n Simple_repeat Simple_repeat 1 91 0 359 229 8 90 chr17_random 482512 482634 -168955 + AluJb SINE Alu 120 231 -71 570 29 0 0 chr17_random 482670 482738 -168851 + (GGAA)n Simple_repeat Simple_repeat 1 68 0 366 42 0 0 chr17_random 482871 482919 -168670 + (CACCC)n Simple_repeat Simple_repeat 1 48 0 323 336 0 9 chr17_random 482921 483028 -168561 - AluJb SINE Alu -45 257 152 235 215 138 0 chr17_random 482985 483050 -168539 + FLAM_A SINE Alu 21 94 -39 * 414 0 0 0 chr17_random 483243 483289 -168300 + (TG)n Simple_repeat Simple_repeat 2 47 0 869 126 0 15 chr17_random 483347 483482 -168107 + AluSg1 SINE Alu 1 133 -176 543 118 0 0 chr17_random 483557 483642 -167947 + (GAAA)n Simple_repeat Simple_repeat 4 88 0 450 53 0 0 chr17_random 484096 484153 -167436 + (GGGA)n Simple_repeat Simple_repeat 1 57 0 1131 94 0 0 chr17_random 484168 484348 -167241 + (GA)n Simple_repeat Simple_repeat 1 180 0 366 80 0 0 chr17_random 484379 484429 -167160 + (GAAA)n Simple_repeat Simple_repeat 4 53 0 22 88 0 0 chr17_random 484920 484977 -166612 + GC_rich Low_complexity Low_complexity 1 57 0 34 96 0 0 chr17_random 485023 485127 -166462 + GC_rich Low_complexity Low_complexity 1 104 0 210 71 0 0 chr17_random 485355 485383 -166206 + (CG)n Simple_repeat Simple_repeat 1 28 0 47 53 0 0 chr17_random 485597 485672 -165917 + GC_rich Low_complexity Low_complexity 1 75 0 28 0 0 0 chr17_random 486297 486325 -165264 + GC_rich Low_complexity Low_complexity 1 28 0 36 70 0 0 chr17_random 486410 486481 -165108 + GC_rich Low_complexity Low_complexity 1 71 0 37 76 0 0 chr17_random 486859 486938 -164651 + GC_rich Low_complexity Low_complexity 1 79 0 217 0 0 57 chr17_random 486939 486974 -164615 + (CCG)n Simple_repeat Simple_repeat 1 33 0 388 226 0 38 chr17_random 487057 487163 -164426 + AluSq/x SINE Alu 15 116 -186 378 91 0 0 chr17_random 487195 487250 -164339 + (CA)n Simple_repeat Simple_repeat 1 55 0 230 79 0 26 chr17_random 488217 488255 -163334 + (TTTTG)n Simple_repeat Simple_repeat 2 38 0 534 143 0 0 chr17_random 488459 488550 -163039 + (TTG)n Simple_repeat Simple_repeat 2 92 0 701 140 7 0 chr17_random 488630 488780 -162809 + CT-rich Low_complexity Low_complexity 1 151 0 261 155 0 0 chr17_random 488802 488860 -162729 + CT-rich Low_complexity Low_complexity 2 59 0 350 363 67 41 chr17_random 488865 489253 -162336 - HAL1 LINE L1 -1230 1277 880 300 127 0 0 chr17_random 489255 489310 -162279 + (TCTCTG)n Simple_repeat Simple_repeat 6 60 0 631 164 6 6 chr17_random 489346 489523 -162066 + CT-rich Low_complexity Low_complexity 2 178 0 411 21 0 0 chr17_random 489529 489577 -162012 + (TG)n Simple_repeat Simple_repeat 2 49 0 257 164 30 0 chr17_random 489601 489668 -161921 + (TCTG)n Simple_repeat Simple_repeat 4 72 0 630 184 0 0 chr17_random 489683 489862 -161727 + CT-rich Low_complexity Low_complexity 2 180 0 261 319 0 26 chr17_random 490278 490391 -161198 - L1MC/D LINE L1 -585 5774 5665 811 126 147 96 chr17_random 491206 491404 -160185 - AluSg/x SINE Alu -9 303 96 2193 88 0 7 chr17_random 492211 492518 -159071 - AluSc SINE Alu -4 305 1 559 181 0 133 chr17_random 495797 495963 -155626 + AluJb SINE Alu 137 280 -32 243 0 0 0 chr17_random 495964 495991 -155598 + (CAGG)n Simple_repeat Simple_repeat 1 27 0 1925 128 3 0 chr17_random 496061 496359 -155230 - AluSp SINE Alu -14 299 1 2296 87 0 0 chr17_random 496366 496759 -154830 - AluY SINE Alu 0 393 1 577 125 117 25 chr17_random 496828 496948 -154641 - FLAM_C SINE Alu 0 133 3 233 236 0 0 chr17_random 497690 497745 -153844 + (TAAA)n Simple_repeat Simple_repeat 2 56 0 834 131 0 0 chr17_random 497751 497896 -153693 + (CAATA)n Simple_repeat Simple_repeat 1 145 0 2031 122 3 0 chr17_random 497896 498199 -153390 + AluSp SINE Alu 1 304 -9 234 0 0 0 chr17_random 498199 498225 -153364 + (CATA)n Simple_repeat Simple_repeat 3 28 0 184 30 61 0 chr17_random 498222 498255 -153334 + A-rich Low_complexity Low_complexity 5 39 0 * 1711 116 19 39 chr17_random 498261 498571 -153018 + AluSg SINE Alu 1 304 -6 216 204 0 0 chr17_random 498605 498649 -152940 + A-rich Low_complexity Low_complexity 1 44 0 189 94 0 0 chr17_random 498997 499029 -152560 + (CCTTG)n Simple_repeat Simple_repeat 2 33 0 2145 107 0 7 chr17_random 499029 499411 -152178 - AluSp SINE Alu 0 313 1 413 317 93 51 chr17_random 499421 500098 -151491 - L1M4c LINE L1 -1206 1537 794 243 0 0 0 chr17_random 500098 500125 -151464 + (TTCC)n Simple_repeat Simple_repeat 1 27 0 1745 147 0 22 chr17_random 500125 500445 -151144 - AluSp SINE Alu 0 313 1 557 202 17 6 chr17_random 500782 500960 -150629 + CT-rich Low_complexity Low_complexity 1 180 0 348 111 0 0 chr17_random 501081 501135 -150454 + (TCCC)n Simple_repeat Simple_repeat 4 57 0 414 0 0 0 chr17_random 501263 501309 -150280 + (TCCC)n Simple_repeat Simple_repeat 4 49 0 3455 108 0 15 chr17_random 502027 502501 -149088 - HERVL66 LTR ERVL -1202 3127 2661 190 292 97 0 chr17_random 502501 502573 -149016 - L3 LINE CR1 -738 839 761 11043 107 6 2 chr17_random 502573 504092 -147497 - HERVL66 LTR ERVL -2618 1711 187 3597 83 87 0 chr17_random 504092 504596 -146993 - LTR66 LTR ERVL -62 548 1 634 222 0 0 chr17_random 504735 504867 -146722 - FLAM_C SINE Alu 0 142 11 626 278 104 23 chr17_random 505152 505440 -146149 + L1 LINE L1 2447 2710 -3436 16100 103 3 0 chr17_random 505440 508433 -143156 + L1PA6 LINE L1 3141 6146 -8 626 278 104 23 chr17_random 508433 508818 -142771 + L1 LINE L1 2710 4808 -1338 25 31 0 0 chr17_random 510076 510108 -141481 + AT_rich Low_complexity Low_complexity 1 32 0 2271 88 0 10 chr17_random 510386 510692 -140897 - AluY SINE Alu -8 303 1 830 169 8 0 chr17_random 510700 510830 -140759 - AluSg SINE Alu -179 131 1 21 0 0 0 chr17_random 510830 510851 -140738 + AT_rich Low_complexity Low_complexity 1 21 0 1361 117 10 5 chr17_random 512077 512273 -139316 + MER107 DNA MER1_type 1 197 0 287 278 0 0 chr17_random 512779 512869 -138720 + L1MB2 LINE L1 1266 1355 -5495 24 32 0 0 chr17_random 512930 512961 -138628 + AT_rich Low_complexity Low_complexity 1 31 0 545 319 91 39 chr17_random 515900 516286 -135303 + L1MB2 LINE L1 1403 1808 -5042 328 313 41 25 chr17_random 516298 516541 -135048 + L1MB2 LINE L1 2457 2703 -4146 673 243 48 67 chr17_random 516729 517212 -134377 + L1MB2 LINE L1 2617 3080 -3768 2158 103 0 13 chr17_random 517212 517513 -134076 - AluSc SINE Alu -12 297 1 673 243 48 67 chr17_random 517513 517598 -133991 + L1MB2 LINE L1 3080 3165 -3683 592 138 43 52 chr17_random 517682 517798 -133791 - AluSp/q SINE Alu -8 305 191 551 279 177 6 chr17_random 517800 518144 -133445 + L1MB2 LINE L1 3173 3575 -3273 1711 193 0 0 chr17_random 518209 518499 -133090 + AluSx SINE Alu 14 303 -9 1191 304 50 28 chr17_random 518502 519120 -132469 + L1MB2 LINE L1 5255 5886 -962 615 252 0 0 chr17_random 519158 519273 -132316 + FLAM_C SINE Alu 1 115 -28 612 226 61 5 chr17_random 519313 519552 -132037 + L1MB2 LINE L1 5912 6162 -723 2270 236 46 3 chr17_random 519555 520123 -131466 + L1MB2 LINE L1 6274 6865 -8 927 172 38 0 chr17_random 521459 521616 -129973 - AluSg/x SINE Alu -15 295 133 1507 228 13 16 chr17_random 521881 522184 -129405 + AluJo SINE Alu 1 302 0 876 243 0 0 chr17_random 522186 522338 -129251 + AluJb SINE Alu 129 280 -32 322 21 43 0 chr17_random 522338 522385 -129204 + (TAGA)n Simple_repeat Simple_repeat 4 52 0 2106 103 0 17 chr17_random 522476 522776 -128813 + AluY SINE Alu 1 295 -16 1552 199 32 0 chr17_random 522884 523165 -128424 - AluJb SINE Alu -17 295 6 2001 149 0 3 chr17_random 523172 523474 -128115 - AluSg SINE Alu -8 302 2 383 255 47 0 chr17_random 524006 524112 -127477 + MIR SINE MIR 79 189 -73 180 0 0 0 chr17_random 527301 527321 -124268 + (A)n Simple_repeat Simple_repeat 1 20 0 251 300 0 0 chr17_random 527616 527706 -123883 - L1MDb LINE L1 -5042 1041 952 551 278 79 42 chr17_random 527735 528088 -123501 - L1MDb LINE L1 -5193 877 512 872 213 76 9 chr17_random 528333 528615 -122974 - AluJb SINE Alu 0 380 85 968 202 35 50 chr17_random 528703 528985 -122604 - L1MB3 LINE L1 -2 6181 5904 222 267 74 44 chr17_random 531100 531235 -120354 + MIR3 SINE MIR 46 184 -24 207 288 30 0 chr17_random 531365 531431 -120158 - MIR SINE MIR -58 150 83 3852 106 40 43 chr17_random 531597 532203 -119386 + LTR66 LTR ERVL 1 604 -6 2277 71 6 62 chr17_random 533612 533934 -117655 - AluY SINE Alu -7 304 1 1425 268 13 8 chr17_random 533977 534357 -117232 - MLT1B LTR MaLR -8 382 1 272 297 55 21 chr17_random 535569 535661 -115928 + MIR SINE MIR 63 163 -99 3547 140 111 0 chr17_random 535661 536210 -115379 - LTR66 LTR ERVL 0 610 1 272 297 55 21 chr17_random 536210 536262 -115327 + MIR SINE MIR 163 212 -50 409 289 9 4 chr17_random 536736 536905 -114684 + L1 LINE L1 3859 4026 -2120 596 306 139 27 chr17_random 538231 538561 -113028 - MLT1E LTR MaLR -5 588 222 980 275 38 31 chr17_random 538706 539034 -112555 + MLT1A1 LTR MaLR 32 626 0 324 238 123 25 chr17_random 539439 539561 -112028 + LTR45 LTR ERV1 392 525 0 1474 185 132 32 chr17_random 539682 540023 -111566 - THE1C LTR MaLR 0 375 1 268 256 226 23 chr17_random 540043 540176 -111413 - MIR3 SINE MIR -47 161 2 2371 101 28 3 chr17_random 541116 541442 -110147 - L1PA8 LINE L1 -2 6485 6152 334 113 0 0 chr17_random 541442 541495 -110094 - L1PA8 LINE L1 -1320 5141 5089 * 16708 147 13 11 chr17_random 541490 545302 -106287 - L1PA8 LINE L1 -1946 4515 556 2317 92 0 0 chr17_random 545693 545988 -105601 - AluY SINE Alu -11 300 6 436 287 37 0 chr17_random 546302 546438 -105151 + MLT1H LTR MaLR 9 149 -400 28 0 0 0 chr17_random 547331 547359 -104230 + AT_rich Low_complexity Low_complexity 1 28 0 1588 301 64 6 chr17_random 548259 549134 -102455 + L1M4 LINE L1 3460 4385 -1761 324 319 9 0 chr17_random 549135 549248 -102341 - MLT1F1 LTR MaLR -29 538 425 1458 119 0 0 chr17_random 549248 549458 -102131 - pTR5 LTR ERV1 -2048 390 181 357 212 10 15 chr17_random 549458 549569 -102020 - LTR30 LTR ERV1 -91 624 375 4040 128 66 41 chr17_random 549569 550508 -101081 - pTR5 LTR ERV1 -413 2025 740 266 177 48 16 chr17_random 550519 550581 -101008 - MLT1F1 LTR MaLR -165 428 365 322 272 29 19 chr17_random 550764 550867 -100722 - MLT1F1 LTR MaLR -370 197 94 569 273 44 88 chr17_random 551756 552005 -99584 - MLT1A1 LTR MaLR -127 238 1 1967 120 10 3 chr17_random 552108 552399 -99190 + AluY SINE Alu 1 293 -18 306 60 30 60 chr17_random 553353 553420 -98169 + (TTTTTG)n Simple_repeat Simple_repeat 2 66 0 1700 162 32 3 chr17_random 553528 553812 -97777 - AluSc SINE Alu -17 292 1 576 264 43 12 chr17_random 554183 554346 -97243 - HERVL40 LTR ERVL -1240 4290 4123 277 202 48 36 chr17_random 554655 554739 -96850 + LTR45 LTR ERV1 441 525 0 256 276 0 0 chr17_random 555130 555188 -96401 - HERVL40 LTR ERVL -1941 3589 3532 601 347 49 15 chr17_random 555387 555940 -95649 - HERVL40 LTR ERVL -2367 3163 2580 425 294 77 33 chr17_random 556106 556378 -95211 - L1M4 LINE L1 -5799 743 460 1196 269 66 25 chr17_random 556384 557064 -94525 - L1M4 LINE L1 -3085 3061 2354 11091 231 73 22 chr17_random 557078 562167 -89422 - L1MA3 LINE L1 0 6956 1541 4400 254 57 2 chr17_random 562165 562438 -89151 - L1PA13 LINE L1 -5712 1075 818 * 243 0 0 0 chr17_random 562438 562465 -89124 + (CA)n Simple_repeat Simple_repeat 1 27 0 4400 254 57 2 chr17_random 562465 563210 -88379 - L1PA13 LINE L1 -5969 818 1 1806 282 77 13 chr17_random 563214 564069 -87520 + L1MB7 LINE L1 5265 6174 -10 310 278 120 43 chr17_random 564589 564798 -86791 - L1MC5 LINE L1 -34 7927 7703 3136 125 20 9 chr17_random 565655 566142 -85447 - LTR15 LTR ERV1 0 595 1 11086 193 13 13 chr17_random 566142 570176 -81413 - HERV15 LTR ERV1 -1 8734 4520 2962 211 10 19 chr17_random 570219 570815 -80774 - HERV15 LTR ERV1 -4344 4082 3492 202 216 0 0 chr17_random 570835 570886 -80703 + T-rich Low_complexity Low_complexity 1 51 0 2627 252 16 16 chr17_random 570892 571506 -80083 - HERV15 LTR ERV1 -6112 2314 1701 * 2965 219 69 26 chr17_random 571495 572425 -79164 - HERV15 LTR ERV1 -7039 1387 430 1605 208 136 27 chr17_random 572425 572867 -78722 - LTR2B LTR ERV1 0 490 1 2425 146 3 13 chr17_random 572867 573252 -78337 - Harlequin LTR ERV1 0 6896 6516 262 216 78 0 chr17_random 573421 573472 -78117 - Tigger6 DNA MER2_type 0 1597 1543 1248 144 7 92 chr17_random 573571 573842 -77747 - L1MA4 LINE L1 -1 6299 6052 1484 185 0 54 chr17_random 575568 575866 -75723 - AluSx SINE Alu -18 294 13 21 0 0 0 chr17_random 576739 576760 -74829 + AT_rich Low_complexity Low_complexity 1 21 0 976 283 32 0 chr17_random 576761 577012 -74577 + AluJo SINE Alu 1 259 -53 372 59 0 0 chr17_random 577035 577086 -74503 + (TAAAA)n Simple_repeat Simple_repeat 1 51 0 2659 248 20 0 chr17_random 578215 578755 -72834 + L1M2 LINE L1 958 1508 -5341 1608 204 3 0 chr17_random 578756 579041 -72548 + AluSx SINE Alu 1 286 -26 1355 111 45 0 chr17_random 579974 580172 -71417 + HERVL66 LTR ERVL 1591 1797 -2532 * 4303 108 5 12 chr17_random 580142 580742 -70847 + HERVL66 LTR ERVL 2647 3242 -1087 1134 78 5 4 chr17_random 580740 580951 -70638 + HERVL66 LTR ERVL 4035 4329 0 * 2678 136 5 0 chr17_random 580953 581351 -70238 + LTR66 LTR ERVL 3 402 -208 657 122 0 61 chr17_random 581351 581466 -70123 + LTR66 LTR ERVL 332 439 -171 267 169 56 0 chr17_random 581486 581557 -70032 + (TAAA)n Simple_repeat Simple_repeat 1 75 0 861 126 147 32 chr17_random 581558 581748 -69841 + LTR66 LTR ERVL 399 610 0 923 167 0 0 chr17_random 581748 581892 -69697 - AluSq/x SINE Alu -167 146 3 4745 165 67 10 chr17_random 581895 582805 -68784 + L1MA1 LINE L1 5341 6302 0 26 30 0 0 chr17_random 582816 582849 -68740 + AT_rich Low_complexity Low_complexity 1 33 0 180 0 0 0 chr17_random 583014 583034 -68555 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 17497 47 4 7 chr17_random 583035 585884 -65705 - L1PA4 LINE L1 -11 6144 3300 21 0 0 0 chr17_random 585995 586016 -65573 + AT_rich Low_complexity Low_complexity 1 21 0 6725 67 8 52 chr17_random 586284 587459 -64130 - SVA Other Other -551 1384 433 5711 81 33 16 chr17_random 587477 588328 -63261 - SVA Other Other -521 865 1 646 280 97 63 chr17_random 588648 589073 -62516 - MER31B LTR ERV1 -9 457 19 953 142 0 26 chr17_random 589285 589509 -62080 + AluSc SINE Alu 1 309 0 16459 226 31 26 chr17_random 589795 594070 -57519 + L1PA12 LINE L1 3 5122 -2462 7623 39 7 1 chr17_random 594070 594948 -56641 + L1PA3 LINE L1 5270 6152 -3 16459 226 31 26 chr17_random 594948 596239 -55350 + L1PA12 LINE L1 5122 6405 -1179 1968 154 7 0 chr17_random 596239 596544 -55045 + L1PA8 LINE L1 5864 6170 -2 5639 156 20 1 chr17_random 596550 597729 -53860 + L1PA12 LINE L1 6401 7606 0 230 278 26 70 chr17_random 597791 597864 -53725 + MLT1J LTR MaLR 398 466 -45 2095 129 3 7 chr17_random 597864 598166 -53423 - AluSp SINE Alu -12 301 1 230 278 26 70 chr17_random 598166 598207 -53382 + MLT1J LTR MaLR 466 507 -4 1059 58 35 6 chr17_random 599595 599768 -51821 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 590 160 8 72 chr17_random 599795 600096 -51493 - AluSc SINE Alu 0 485 193 1534 136 0 5 chr17_random 600096 600317 -51272 - AluSc SINE Alu -83 226 7 1155 225 39 85 chr17_random 600343 600596 -50993 - L1MB7 LINE L1 0 6184 5958 2213 98 16 7 chr17_random 600596 600903 -50686 - AluY SINE Alu -1 310 1 1155 225 39 85 chr17_random 600903 601084 -50505 - L1MB7 LINE L1 -226 5958 5770 1912 138 31 0 chr17_random 601084 601375 -50214 + AluSx SINE Alu 1 300 -12 255 290 76 0 chr17_random 601375 601506 -50083 + L1 LINE L1 5215 5355 -791 22295 80 2 0 chr17_random 601615 604906 -46683 + L1P LINE L1 1 3297 -2849 217 407 37 7 chr17_random 605483 605618 -45971 - L2 LINE L2 0 3313 3175 3620 67 6 4 chr17_random 605630 606105 -45484 + L1PA5 LINE L1 5668 6143 -11 1348 134 5 0 chr17_random 606139 606341 -45248 - AluSc SINE Alu -106 203 1 3576 199 55 139 chr17_random 606342 607237 -44352 - L1P LINE L1 -1492 4654 3713 1139 115 10 26 chr17_random 607237 607429 -44160 - AluY SINE Alu -4 307 119 3576 199 55 139 chr17_random 607429 607763 -43826 - L1P LINE L1 -2433 3713 3353 888 314 35 18 chr17_random 607813 608519 -43070 - L1M4 LINE L1 -1121 5419 4702 1315 151 0 0 chr17_random 608738 608943 -42646 + AluSq SINE Alu 1 205 -108 714 347 28 24 chr17_random 609056 609566 -42023 + LTR40a LTR ERVL 4 515 -4 2840 266 11 5 chr17_random 610178 610926 -40663 - ERVL LTR ERVL -1127 4637 3886 889 238 23 9 chr17_random 610954 611168 -40421 - AluJo SINE Alu -94 218 2 920 223 27 5 chr17_random 612024 612244 -39345 - AluJo SINE Alu -83 229 5 1709 163 0 13 chr17_random 612777 613078 -38511 - AluSq SINE Alu -11 302 6 252 122 0 0 chr17_random 613088 613129 -38460 + (T)n Simple_repeat Simple_repeat 1 41 0 1592 211 123 68 chr17_random 613171 613740 -37849 + MER4A LTR ERV1 1 600 0 1836 164 3 0 chr17_random 614126 614436 -37153 - AluSx SINE Alu 0 312 2 319 248 92 18 chr17_random 616048 616157 -35432 - L1MEc LINE L1 -4043 2497 2381 537 224 0 47 chr17_random 616158 616265 -35324 - AluJb SINE Alu -54 258 157 268 254 15 0 chr17_random 616266 616333 -35256 + AluJb SINE Alu 195 262 -40 485 252 0 0 chr17_random 616494 616605 -34984 - FRAM SINE Alu -2 174 64 229 222 16 0 chr17_random 616680 616743 -34846 + AluJ/FLAM SINE Alu 34 97 -205 1077 208 11 52 chr17_random 616743 617012 -34577 - AluJb SINE Alu -54 258 1 409 320 80 42 chr17_random 617013 617407 -34182 - L1MEc LINE L1 -1205 1696 1294 1402 175 36 0 chr17_random 617811 618063 -33526 - AluSx SINE Alu -23 289 29 1556 209 0 0 chr17_random 618163 618469 -33120 + AluSg SINE Alu 1 306 -4 435 233 29 10 chr17_random 618623 618726 -32863 - AluSx SINE Alu -157 155 51 1586 194 7 3 chr17_random 619124 619433 -32156 - AluSp SINE Alu -3 310 1 631 262 0 72 chr17_random 619811 620109 -31480 + L1PA13 LINE L1 5889 6162 -1 213 39 0 0 chr17_random 620109 620135 -31454 + (GA)n Simple_repeat Simple_repeat 1 26 0 1098 208 13 0 chr17_random 620227 620458 -31131 - AluSg/x SINE Alu -1 311 78 216 204 0 0 chr17_random 620516 620560 -31029 + A-rich Low_complexity Low_complexity 1 44 0 222 62 0 0 chr17_random 620907 620939 -30650 + (CCTTG)n Simple_repeat Simple_repeat 2 33 0 198 0 0 0 chr17_random 620939 620961 -30628 + (TTTC)n Simple_repeat Simple_repeat 2 23 0 2256 109 0 0 chr17_random 620972 621284 -30305 - AluSp SINE Alu -1 312 1 452 362 100 27 chr17_random 621290 621984 -29605 - L1M4c LINE L1 -1206 1537 1029 1770 150 0 22 chr17_random 621984 622304 -29285 - AluSp SINE Alu 0 313 1 452 362 100 27 chr17_random 622304 622393 -29196 - L1M4c LINE L1 -1714 1029 948 381 342 116 33 chr17_random 622610 622946 -28643 - L1M4c LINE L1 -5169 1215 852 279 114 0 0 chr17_random 622946 622990 -28599 + (TCCC)n Simple_repeat Simple_repeat 4 47 0 306 0 0 0 chr17_random 623118 623152 -28437 + (TCCC)n Simple_repeat Simple_repeat 4 37 0 23 78 0 0 chr17_random 623809 623860 -27729 + GC_rich Low_complexity Low_complexity 1 51 0 207 0 0 0 chr17_random 624670 624693 -26896 + (CCG)n Simple_repeat Simple_repeat 2 24 0 29 0 0 0 chr17_random 624710 624739 -26850 + GC_rich Low_complexity Low_complexity 1 29 0 21 57 0 0 chr17_random 625623 625658 -25931 + GC_rich Low_complexity Low_complexity 1 35 0 39 50 0 0 chr17_random 625670 625730 -25859 + GC_rich Low_complexity Low_complexity 1 60 0 22 0 0 0 chr17_random 625790 625812 -25777 + GC_rich Low_complexity Low_complexity 1 22 0 348 24 0 0 chr17_random 625953 625994 -25595 + (CCG)n Simple_repeat Simple_repeat 2 42 0 198 0 0 0 chr17_random 626056 626078 -25511 + (CGGA)n Simple_repeat Simple_repeat 2 23 0 243 123 0 92 chr17_random 626193 626258 -25331 + (CCCCCG)n Simple_repeat Simple_repeat 5 63 0 267 275 0 0 chr17_random 626258 626327 -25262 + G-rich Low_complexity Low_complexity 1 69 0 26 0 0 0 chr17_random 626572 626598 -24991 + GC_rich Low_complexity Low_complexity 1 26 0 24 0 0 0 chr17_random 626695 626719 -24870 + GC_rich Low_complexity Low_complexity 1 24 0 25 105 0 0 chr17_random 626960 627055 -24534 + GC_rich Low_complexity Low_complexity 1 95 0 23 54 0 0 chr17_random 627237 627274 -24315 + GC_rich Low_complexity Low_complexity 1 37 0 232 197 30 0 chr17_random 628291 628357 -23232 + (CGG)n Simple_repeat Simple_repeat 1 68 0 289 165 0 73 chr17_random 628390 628499 -23090 - MER45C DNA AcHobo -363 590 490 23 54 0 0 chr17_random 628577 628614 -22975 + GC_rich Low_complexity Low_complexity 1 37 0 24 53 0 0 chr17_random 628650 628688 -22901 + GC_rich Low_complexity Low_complexity 1 38 0 29 47 0 0 chr17_random 628765 628808 -22781 + GC_rich Low_complexity Low_complexity 1 43 0 236 98 0 24 chr17_random 628837 628878 -22711 + (TC)n Simple_repeat Simple_repeat 1 40 0 33 88 0 9 chr17_random 628895 628917 -22672 + GC_rich Low_complexity Low_complexity 1 22 -91 192 77 0 0 chr17_random 628917 628943 -22646 + (CGAA)n Simple_repeat Simple_repeat 1 26 0 33 88 0 9 chr17_random 628943 629034 -22555 + GC_rich Low_complexity Low_complexity 22 113 0 32 0 0 0 chr17_random 630638 630670 -20919 + GC_rich Low_complexity Low_complexity 1 32 0 28 86 0 0 chr17_random 630932 631002 -20587 + GC_rich Low_complexity Low_complexity 1 70 0 209 83 28 0 chr17_random 631015 631051 -20538 + (CGGA)n Simple_repeat Simple_repeat 3 39 0 38 39 0 0 chr17_random 631061 631113 -20476 + GC_rich Low_complexity Low_complexity 1 52 0 71 71 0 0 chr17_random 631194 631335 -20254 + GC_rich Low_complexity Low_complexity 1 141 0 23 0 0 0 chr17_random 631465 631488 -20101 + GC_rich Low_complexity Low_complexity 1 23 0 46 68 0 0 chr17_random 631532 631620 -19969 + GC_rich Low_complexity Low_complexity 1 88 0 232 272 15 22 chr17_random 631998 632134 -19455 + (CCG)n Simple_repeat Simple_repeat 3 137 0 23 33 0 0 chr17_random 632575 632605 -18984 + GC_rich Low_complexity Low_complexity 1 30 0 21 0 0 0 chr17_random 632896 632917 -18672 + GC_rich Low_complexity Low_complexity 1 21 0 210 191 48 0 chr17_random 634174 634216 -17373 + (CCGG)n Simple_repeat Simple_repeat 2 45 0 22 0 0 0 chr17_random 634303 634325 -17264 + GC_rich Low_complexity Low_complexity 1 22 0 23 78 0 0 chr17_random 635000 635051 -16538 + GC_rich Low_complexity Low_complexity 1 51 0 342 0 0 0 chr17_random 635708 635746 -15843 + (GGGA)n Simple_repeat Simple_repeat 4 41 0 315 104 0 0 chr17_random 635874 635922 -15667 + (GGGA)n Simple_repeat Simple_repeat 4 51 0 346 338 109 39 chr17_random 635922 636253 -15336 + L1M4c LINE L1 852 1205 -5179 1765 150 0 22 chr17_random 636564 636884 -14705 + AluSp SINE Alu 1 313 0 454 347 123 24 chr17_random 636900 637439 -14150 + L1M2 LINE L1 863 1301 -1206 246 32 0 0 chr17_random 637449 637480 -14109 + (GA)n Simple_repeat Simple_repeat 1 31 0 2171 108 0 7 chr17_random 637480 637864 -13725 + AluSp SINE Alu 2 313 0 189 94 0 0 chr17_random 637864 637896 -13693 + (CAAGG)n Simple_repeat Simple_repeat 2 33 0 216 204 0 0 chr17_random 638244 638288 -13301 + T-rich Low_complexity Low_complexity 1 44 0 1745 116 19 39 chr17_random 638322 638632 -12957 - AluSg SINE Alu -6 304 1 2086 117 3 16 chr17_random 638638 638668 -12921 - AluSp SINE Alu 0 313 284 432 51 0 0 chr17_random 638668 638727 -12862 + (TATG)n Simple_repeat Simple_repeat 2 60 0 2086 117 3 16 chr17_random 638727 639012 -12577 - AluSp SINE Alu -29 284 2 831 130 0 0 chr17_random 639012 639158 -12431 + (TATTG)n Simple_repeat Simple_repeat 1 146 0 233 236 0 0 chr17_random 639164 639219 -12370 + (TTTA)n Simple_repeat Simple_repeat 2 56 0 590 125 117 25 chr17_random 639961 640081 -11508 + FLAM_C SINE Alu 3 133 0 309 100 30 50 chr17_random 640128 640144 -11445 + (TAAA)n Simple_repeat Simple_repeat 3 18 -82 2331 87 0 0 chr17_random 640144 640454 -11135 + AluY SINE Alu 1 310 -1 309 100 30 50 chr17_random 640454 640537 -11052 + (TAAA)n Simple_repeat Simple_repeat 18 100 0 1963 128 3 0 chr17_random 640544 640842 -10747 + AluSp SINE Alu 1 299 -14 252 0 0 0 chr17_random 640912 640940 -10649 + (CCTG)n Simple_repeat Simple_repeat 1 28 0 579 181 0 133 chr17_random 640941 641107 -10482 - AluJb SINE Alu -32 280 137 2227 88 0 7 chr17_random 644379 644686 -6903 + AluSc SINE Alu 1 305 -4 21 0 0 0 chr17_random 645409 645430 -6159 + AT_rich Low_complexity Low_complexity 1 21 0 854 127 160 39 chr17_random 645500 645681 -5908 + AluSg/x SINE Alu 99 301 -9 244 319 0 26 chr17_random 646496 646609 -4980 + L1MC/D LINE L1 5665 5774 -585 231 103 0 0 chr17_random 647005 647044 -4545 + (CAGA)n Simple_repeat Simple_repeat 2 40 0 343 364 64 44 chr17_random 647047 647225 -4364 + L1M4c LINE L1 947 1120 -5264 219 114 0 0 chr17_random 647225 647260 -4329 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 343 364 64 44 chr17_random 647260 647907 -3682 + L1M4c LINE L1 1120 1307 -5077 542 210 0 6 chr17_random 647907 648088 -3501 + GA-rich Low_complexity Low_complexity 1 180 0 229 191 0 0 chr17_random 648091 648138 -3451 + (CAGAGA)n Simple_repeat Simple_repeat 2 48 0 1487 141 0 20 chr17_random 648186 648213 -3376 - AluSg SINE Alu -1 309 283 531 78 0 0 chr17_random 648213 648290 -3299 + (TATG)n Simple_repeat Simple_repeat 2 78 0 1487 141 0 20 chr17_random 648290 648517 -3072 - AluSg SINE Alu -27 283 60 243 0 0 0 chr17_random 648610 648637 -2952 + (TTAG)n Simple_repeat Simple_repeat 2 28 0 275 114 0 0 chr17_random 648658 648702 -2887 - AluSp/q SINE Alu -20 283 240 1545 159 40 17 chr17_random 648807 649103 -2486 + AluSx SINE Alu 10 312 0 589 101 20 0 chr17_random 649200 649299 -2290 + (TC)n Simple_repeat Simple_repeat 2 102 0 736 248 0 63 chr17_random 649310 649580 -2009 - L1PA13 LINE L1 -11 6152 5900 458 193 1 65 chr17_random 649777 649922 -1667 - MER39B LTR ERV1 -242 411 298 201 197 0 0 chr17_random 649932 649993 -1596 + GA-rich Low_complexity Low_complexity 2 62 0 348 358 83 46 chr17_random 649993 650148 -1441 + L1M4c LINE L1 961 1109 -1634 207 114 0 0 chr17_random 650148 650183 -1406 + (CAGA)n Simple_repeat Simple_repeat 2 36 0 348 358 83 46 chr17_random 650183 650228 -1361 + L1M4c LINE L1 1109 1151 -1592 939 139 0 0 chr17_random 650228 650408 -1181 + (GA)n Simple_repeat Simple_repeat 1 180 0 348 358 83 46 chr17_random 650408 650792 -797 + L1M4c LINE L1 1151 1513 -1230 386 333 104 52 chr17_random 650815 651338 -251 + L1M4c LINE L1 937 1532 -1211 697 182 0 30 chr17_random 651381 651410 -179 - AluSg/x SINE Alu -1 309 281 510 91 0 0 chr17_random 651410 651487 -102 + (TATG)n Simple_repeat Simple_repeat 2 78 0 697 182 0 30 chr17_random 651487 651589 0 - AluSg/x SINE Alu -29 281 182