393 100 71 14 chr15 17000001 17000071 -84380450 + MSTA LTR MaLR 124 197 -231 2204 110 10 3 chr15 17000073 17000452 -84380069 + AluY SINE Alu 1 381 0 764 191 167 9 chr15 17000452 17000662 -84379859 + MSTA LTR MaLR 186 428 0 685 228 0 59 chr15 17000664 17000883 -84379638 + L1 LINE L1 3344 3549 -2597 1178 254 59 104 chr15 17000985 17001266 -84379255 - L1MEd LINE L1 -3105 3024 2732 250 171 0 0 chr15 17001266 17001307 -84379214 + U2 snRNA snRNA 1 41 -147 1178 254 59 104 chr15 17001307 17001810 -84378711 - L1MEd LINE L1 -3397 2732 2237 1276 219 7 7 chr15 17001840 17002110 -84378411 + L1M3e LINE L1 7 276 -6754 505 261 116 39 chr15 17002095 17002158 -84378363 - L1MEd LINE L1 -4011 2118 2061 * 964 113 6 6 chr15 17002158 17002317 -84378204 + (TTCC)n Simple_repeat Simple_repeat 3 161 0 505 261 116 39 chr15 17002317 17002537 -84377984 - L1MEd LINE L1 -4068 2061 1813 2032 241 9 9 chr15 17002538 17003116 -84377405 - L1MEd LINE L1 -4475 1654 1077 1296 217 38 62 chr15 17005195 17005568 -84374953 + MSTD LTR MaLR 33 396 0 1502 273 28 2 chr15 17005571 17006003 -84374518 + MSTD-int LTR MaLR 2 444 -1291 * 1823 252 143 66 chr15 17005999 17006831 -84373690 + MSTD-int LTR MaLR 730 1625 -26 1506 208 46 14 chr15 17006854 17007200 -84373321 + MSTD LTR MaLR 1 357 -39 1053 122 0 0 chr15 17007204 17007352 -84373169 + AluY SINE Alu 146 293 -18 308 102 0 20 chr15 17007352 17007401 -84373120 + MSTD LTR MaLR 348 395 -1 478 106 0 47 chr15 17007403 17007488 -84373033 - L1M2 LINE L1 -822 5469 5389 1629 183 29 39 chr15 17007496 17007907 -84372614 + L1MA7 LINE L1 5867 6273 -18 1365 319 51 41 chr15 17007985 17008774 -84371747 - MER89-int LTR ERV1 -2507 4294 3498 260 176 0 66 chr15 17011914 17012096 -84368425 + (CAGGT)n Simple_repeat Simple_repeat 1 170 0 346 325 41 33 chr15 17012893 17013164 -84367357 - L1ME3A LINE L1 -214 5956 5684 303 205 0 98 chr15 17013307 17013419 -84367102 - L1MEd LINE L1 -5051 1068 968 1758 238 82 14 chr15 17017906 17018490 -84362031 - MER67B LTR ERV1 -6 655 32 887 234 71 69 chr15 17019386 17019750 -84360771 + MLT1A1 LTR MaLR 1 365 0 369 347 112 16 chr15 17020050 17020301 -84360220 - L1ME4a LINE L1 -183 5938 5664 359 251 82 45 chr15 17020286 17020460 -84360061 - L1ME4a LINE L1 -755 5391 5213 * 267 298 38 15 chr15 17020995 17021126 -84359395 - L1ME4a LINE L1 -2595 3551 3418 368 317 13 88 chr15 17021700 17021927 -84358594 - MIR SINE MIR 0 262 53 327 164 0 0 chr15 17024439 17024500 -84356021 + GA-rich Low_complexity Low_complexity 1 61 0 912 238 107 47 chr15 17024652 17025081 -84355440 - MLT1D LTR MaLR -12 493 39 180 0 0 0 chr15 17028151 17028171 -84352350 + (CA)n Simple_repeat Simple_repeat 2 21 0 601 203 11 0 chr15 17028925 17029102 -84351419 + (TCCA)n Simple_repeat Simple_repeat 1 179 0 3823 138 14 22 chr15 17029105 17029690 -84350831 - MER50 LTR ERV1 -17 717 135 2153 129 0 0 chr15 17029690 17030001 -84350520 - AluSc SINE Alu 0 311 1 3823 138 14 22 chr15 17030001 17030054 -84350467 - MER50 LTR ERV1 -599 135 83 699 201 0 0 chr15 17030082 17030332 -84350189 + (TCCA)n Simple_repeat Simple_repeat 1 250 0 182 125 0 25 chr15 17030900 17030940 -84349581 + (TC)n Simple_repeat Simple_repeat 2 40 0 2109 147 3 0 chr15 17031254 17031553 -84348968 - AluSx SINE Alu -12 300 1 507 226 8 0 chr15 17032192 17032316 -84348205 - L1MA8 LINE L1 0 6291 6167 1528 208 60 21 chr15 17033108 17033493 -84347028 + MLT1D LTR MaLR 1 400 -105 507 271 0 0 chr15 17034219 17034348 -84346173 - FRAM SINE Alu -46 130 2 597 125 21 0 chr15 17034365 17034461 -84346060 + AluJ/FLAM SINE Alu 2 99 -213 506 276 70 30 chr15 17034476 17034675 -84345846 - MLT2F LTR ERVL -72 591 385 463 197 42 42 chr15 17034692 17034834 -84345687 - LTR49-int LTR ERV1 -2154 4177 4036 3615 232 46 25 chr15 17034844 17035693 -84344828 + L1PA13 LINE L1 1 867 -5920 4880 204 18 38 chr15 17035699 17037498 -84343023 + L1PA13 LINE L1 1204 2981 -3816 40330 60 3 1 chr15 17037504 17043651 -84336870 - L1PA4 LINE L1 0 6155 1 1366 179 17 109 chr15 17043686 17043741 -84336780 + THE1C LTR MaLR 1 59 -316 2769 17 0 0 chr15 17043741 17044038 -84336483 + AluYa5 SINE Alu 1 297 -14 1366 179 17 109 chr15 17044038 17044395 -84336126 + THE1C LTR MaLR 59 375 0 1331 145 9 13 chr15 17044395 17044623 -84335898 + THE1C-int LTR MaLR 1 227 -1353 1623 104 0 0 chr15 17044623 17044853 -84335668 + MER4E LTR ERV1 1 230 -549 2227 121 3 0 chr15 17044853 17045151 -84335370 + AluSp SINE Alu 1 299 -14 728 119 8 0 chr15 17045169 17045287 -84335234 + (GGAA)n Simple_repeat Simple_repeat 2 120 0 2191 147 98 6 chr15 17045288 17045711 -84334810 + MER4E LTR ERV1 217 650 -129 6657 160 7 29 chr15 17045730 17046939 -84333582 + THE1-int LTR MaLR 416 1578 -2 10155 89 12 1 chr15 17046972 17048355 -84332166 + HERVL-A2 LTR ERVL 4258 5654 0 2993 81 17 2 chr15 17048355 17048762 -84331759 + MLT2A2 LTR ERVL 1 413 -40 21 0 0 0 chr15 17048767 17048788 -84331733 + AT_rich Low_complexity Low_complexity 1 21 0 247 73 98 0 chr15 17048794 17048835 -84331686 - MLT2A2 LTR ERVL -10 443 399 1285 232 23 31 chr15 17054350 17054738 -84325783 - MLT1B LTR MaLR 0 390 6 435 305 21 21 chr15 17055133 17055323 -84325198 + L1MEc LINE L1 390 579 -5817 812 164 10 77 chr15 17055395 17055590 -84324931 - MER4A LTR ERV1 -110 554 373 240 99 380 14 chr15 17055645 17055716 -84324805 - MER4A LTR ERV1 -567 97 1 204 88 59 0 chr15 17057078 17057112 -84323409 + (CCTTG)n Simple_repeat Simple_repeat 4 39 0 1578 151 27 83 chr15 17057134 17057579 -84322942 + HSREP522 Satellite telomeric 3 422 -82 981 197 5 0 chr15 17057598 17057801 -84322720 - L1 LINE L1 -1998 4148 3945 619 175 8 42 chr15 17057832 17057952 -84322569 - FLAM_A SINE Alu -17 116 1 21 0 0 0 chr15 17058005 17058026 -84322495 + AT_rich Low_complexity Low_complexity 1 21 0 5697 137 15 18 chr15 17058026 17059116 -84321405 + L1MA5A LINE L1 5174 6264 -33 21 0 0 0 chr15 17059130 17059151 -84321370 + AT_rich Low_complexity Low_complexity 1 21 0 2432 146 51 91 chr15 17059860 17060484 -84320037 - L1MB2 LINE L1 -1 6170 5572 22 0 0 0 chr15 17060552 17060574 -84319947 + AT_rich Low_complexity Low_complexity 1 22 0 2396 76 0 22 chr15 17060709 17061023 -84319498 - AluY SINE Alu -4 307 1 276 30 0 0 chr15 17061298 17061331 -84319190 + (CA)n Simple_repeat Simple_repeat 2 34 0 241 240 0 0 chr15 17062732 17062782 -84317739 + MER3 DNA MER1_type 41 90 -119 * 740 173 123 17 chr15 17062750 17062929 -84317592 - MER3 DNA MER1_type -11 198 1 705 152 3 43 chr15 17063374 17063575 -84316946 - L1MB8 LINE L1 -2 6182 5989 807 188 0 6 chr15 17063595 17063760 -84316761 - L1MB8 LINE L1 -170 6008 5845 278 310 9 0 chr15 17064595 17064708 -84315813 + (TG)n Simple_repeat Simple_repeat 2 115 0 1639 151 14 92 chr15 17066419 17066790 -84313731 + MER2 DNA MER2_type 3 344 0 387 0 0 0 chr15 17067215 17067258 -84313263 + (CA)n Simple_repeat Simple_repeat 1 43 0 194 114 0 23 chr15 17067261 17067305 -84313216 + (CAAAA)n Simple_repeat Simple_repeat 2 44 0 247 204 0 19 chr15 17068278 17068332 -84312189 + L2 LINE L2 3217 3269 -3 600 314 64 13 chr15 17068917 17069153 -84311368 + L2 LINE L2 2729 2976 -338 842 149 32 0 chr15 17069158 17069312 -84311209 - L1MB1 LINE L1 -1 6167 6009 1959 120 11 0 chr15 17071069 17071335 -84309186 - AluSx SINE Alu -43 269 1 26 0 0 0 chr15 17074130 17074156 -84306365 + AT_rich Low_complexity Low_complexity 1 26 0 213 226 113 47 chr15 17074486 17074592 -84305929 + MIR SINE MIR 100 212 -50 340 310 129 19 chr15 17074807 17074962 -84305559 + MIR3 SINE MIR 13 184 -24 2283 123 0 0 chr15 17075799 17076109 -84304412 + AluSq SINE Alu 1 310 -3 278 26 26 0 chr15 17076864 17076903 -84303618 + (TA)n Simple_repeat Simple_repeat 1 40 0 22 56 0 0 chr15 17077748 17077784 -84302737 + AT_rich Low_complexity Low_complexity 1 36 0 809 176 8 0 chr15 17077784 17077915 -84302606 + AluJo/FLAM SINE Alu 1 132 -180 1611 178 59 0 chr15 17077917 17078204 -84302317 + AluJo SINE Alu 1 304 -8 254 318 0 0 chr15 17078395 17078483 -84302038 + MIR SINE MIR 175 262 0 2370 83 0 7 chr15 17078564 17078865 -84301656 - AluY SINE Alu -12 299 1 253 260 57 24 chr15 17078902 17079025 -84301496 - L1ME4a LINE L1 -51 6070 5944 1982 115 3 31 chr15 17079192 17079478 -84301043 + AluSq SINE Alu 5 282 -31 180 0 0 0 chr15 17079479 17079499 -84301022 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 616 251 16 43 chr15 17079509 17079764 -84300757 + L1MEd LINE L1 1010 1257 -4862 881 108 0 47 chr15 17080766 17080914 -84299607 - AluSp/q SINE Alu 0 313 173 2561 159 38 4 chr15 17080914 17081410 -84299111 - L1MA4 LINE L1 -290 6010 5498 2170 129 0 3 chr15 17082679 17082989 -84297532 + AluSx SINE Alu 1 309 -3 1364 236 47 4 chr15 17083663 17083939 -84296582 - L1ME4a LINE L1 -465 5701 5391 2170 91 0 3 chr15 17083939 17084224 -84296297 - AluSx SINE Alu -24 288 5 1364 236 47 4 chr15 17084224 17084410 -84296111 - L1ME4a LINE L1 -775 5391 5214 2113 112 3 0 chr15 17084718 17085004 -84295517 + AluSg SINE Alu 1 287 -23 24 0 0 0 chr15 17085007 17085031 -84295490 + AT_rich Low_complexity Low_complexity 1 24 0 2187 95 3 0 chr15 17085243 17085549 -84294972 + AluSx SINE Alu 1 307 0 1970 142 0 28 chr15 17086082 17086400 -84294121 + AluSx SINE Alu 1 309 -3 2186 108 7 0 chr15 17087086 17087373 -84293148 + AluSx SINE Alu 1 289 -23 635 121 0 10 chr15 17087763 17087862 -84292659 - MER4A LTR ERV1 -566 98 1 944 121 79 11 chr15 17087862 17088052 -84292469 + L1MA3 LINE L1 5705 5907 -398 * 2513 195 83 10 chr15 17088050 17088727 -84291794 - L1 LINE L1 -1446 4700 3975 * 6545 122 28 23 chr15 17088719 17090207 -84290314 - L1PA3 LINE L1 -2 6153 4674 1960 113 0 21 chr15 17090207 17090516 -84290005 - AluSx SINE Alu 0 311 9 6545 122 28 23 chr15 17090516 17090736 -84289785 - L1PA3 LINE L1 -1481 4674 3052 2111 118 6 9 chr15 17090737 17091069 -84289452 - L1PB2 LINE L1 0 7570 7240 2798 200 25 27 chr15 17091069 17092032 -84288489 - L1PB2 LINE L1 -622 6948 5996 2953 214 32 10 chr15 17092053 17092966 -84287555 - L1PB2 LINE L1 -3114 4451 3509 601 220 10 171 chr15 17092970 17093300 -84287221 - LTR28 LTR ERV1 -136 894 1 7081 226 42 8 chr15 17093301 17094925 -84285596 - L1M1 LINE L1 -5870 1695 17 376 191 0 0 chr15 17096539 17096623 -84283898 - L1MA4 LINE L1 -179 6121 6041 601 219 46 13 chr15 17096642 17096793 -84283728 + FRAM SINE Alu 1 156 -20 1640 212 3 0 chr15 17096795 17097097 -84283424 + AluJo SINE Alu 1 303 -9 235 226 21 0 chr15 17097218 17097304 -84283217 + L1MB5 LINE L1 5838 5932 -238 1803 141 25 14 chr15 17097341 17097625 -84282896 + AluSx SINE Alu 1 287 -25 2311 258 89 48 chr15 17097994 17100383 -84280138 - L1M4 LINE L1 -3644 3000 509 237 189 116 11 chr15 17100432 17100527 -84279994 - L1M4 LINE L1 -3081 3065 2961 1275 243 14 7 chr15 17100527 17100815 -84279706 - AluJb SINE Alu -22 290 1 290 203 40 124 chr15 17100906 17101108 -84279413 + MER53 DNA DNA 5 189 0 1015 258 0 14 chr15 17101833 17102054 -84278467 - AluJo SINE Alu -82 230 13 314 304 5 77 chr15 17102489 17102683 -84277838 + MLT1E2 LTR MaLR 1 180 -446 23 54 0 0 chr15 17104595 17104632 -84275889 + AT_rich Low_complexity Low_complexity 1 37 0 25 31 0 0 chr15 17105432 17105464 -84275057 + AT_rich Low_complexity Low_complexity 1 32 0 3423 210 57 27 chr15 17106992 17108895 -84271626 - L1MA8 LINE L1 -3 6288 4326 4837 135 66 7 chr15 17108917 17109868 -84270653 - L1MA2 LINE L1 0 6304 5298 516 256 175 6 chr15 17110460 17110820 -84269701 + L1MB2 LINE L1 1071 1491 -4822 568 292 74 19 chr15 17110857 17111295 -84269226 + L1MB2 LINE L1 1363 2223 -4160 427 225 100 50 chr15 17111459 17111896 -84268625 + L1MB2 LINE L1 2137 2611 -3771 281 280 146 0 chr15 17112143 17112391 -84268130 + L1MB2 LINE L1 2837 3119 -3263 804 281 30 9 chr15 17112400 17112731 -84267790 + L1MB2 LINE L1 4757 5094 -1288 447 251 170 0 chr15 17112726 17112949 -84267572 + L1MB2 LINE L1 5914 6174 -233 * 2223 93 10 7 chr15 17112975 17113275 -84267246 + AluSx SINE Alu 1 301 -11 802 282 64 88 chr15 17114159 17114783 -84265738 + L1M3 LINE L1 2 610 -5345 2756 236 68 55 chr15 17114826 17115450 -84265071 + L1M3 LINE L1 3978 4592 -1464 2194 106 0 7 chr15 17115450 17115733 -84264788 - AluSg SINE Alu -29 281 1 2756 236 68 55 chr15 17115733 17116473 -84264048 + L1M3 LINE L1 4592 5367 -689 376 183 0 0 chr15 17116482 17116553 -84263968 + L1PB4 LINE L1 6045 6115 -41 2129 84 18 0 chr15 17117160 17117478 -84263043 - AluSc SINE Alu 0 323 1 398 298 109 75 chr15 17118296 17118735 -84261786 + L1M2 LINE L1 613 1066 -5783 2206 117 3 3 chr15 17119016 17119315 -84261206 + AluSg SINE Alu 1 299 -11 2533 114 13 8 chr15 17120511 17120904 -84259617 + L1PA12 LINE L1 5774 6168 0 502 259 0 32 chr15 17121226 17121411 -84259110 - MER104 DNA MER2_type -1 179 1 562 292 93 40 chr15 17121513 17121761 -84258760 - MIR SINE MIR -1 261 4 264 30 0 0 chr15 17122974 17123007 -84257514 + (TG)n Simple_repeat Simple_repeat 2 34 0 262 367 36 36 chr15 17123507 17123646 -84256875 - MER5B DNA MER1_type 0 178 40 733 178 0 0 chr15 17123651 17123769 -84256752 + FLAM_A SINE Alu 1 118 -15 1066 198 156 11 chr15 17123943 17124206 -84256315 - AluJb SINE Alu -1 301 1 183 305 85 0 chr15 17124831 17124890 -84255631 - L2 LINE L2 -50 3263 3200 325 299 101 22 chr15 17125954 17126164 -84254357 + MIR SINE MIR 7 231 -31 572 189 9 9 chr15 17128139 17128245 -84252276 + U6 snRNA snRNA 1 106 -1 295 371 53 0 chr15 17128938 17129089 -84251432 - MIR SINE MIR -47 215 57 3128 163 8 9 chr15 17129471 17129999 -84250522 - MER1A DNA MER1_type 0 527 1 300 192 0 0 chr15 17130227 17130279 -84250242 - MER91B DNA MER1_type -60 130 79 535 283 184 13 chr15 17131269 17131654 -84248867 - MLT1L LTR MaLR -164 451 1 181 296 56 28 chr15 17131660 17131731 -84248790 - L2 LINE L2 -565 2749 2677 852 224 47 47 chr15 17131736 17131950 -84248571 - MER58A DNA MER1_type -3 221 8 2058 154 7 0 chr15 17133729 17134035 -84246486 + AluSc SINE Alu 1 308 -1 1381 182 140 53 chr15 17134138 17134627 -84245894 - LTR61 LTR ERV1 -2 593 1 28 61 0 0 chr15 17135121 17135170 -84245351 + AT_rich Low_complexity Low_complexity 1 49 0 47 61 0 0 chr15 17136214 17136296 -84244225 + AT_rich Low_complexity Low_complexity 1 82 0 396 271 88 123 chr15 17137123 17138032 -84242489 + L1M4 LINE L1 528 1373 -5476 1326 184 42 16 chr15 17140045 17140174 -84240347 - L1MA9 LINE L1 -387 5925 5801 261 0 0 0 chr15 17140174 17140203 -84240318 + (TG)n Simple_repeat Simple_repeat 2 30 0 1326 184 42 16 chr15 17140203 17140382 -84240139 - L1MA9 LINE L1 -511 5801 5609 1294 181 39 4 chr15 17140376 17140657 -84239864 + L1MA9 LINE L1 5972 6262 -50 * 286 187 22 112 chr15 17140909 17141043 -84239478 - L1MEc LINE L1 -4258 2138 2017 1595 118 29 105 chr15 17141044 17141385 -84239136 - AluYb8 SINE Alu 0 317 1 306 0 0 0 chr15 17142563 17142597 -84237924 + (CA)n Simple_repeat Simple_repeat 1 34 0 2128 119 7 10 chr15 17142777 17143079 -84237442 + AluSx SINE Alu 1 301 -11 342 123 231 0 chr15 17145208 17145273 -84235248 + MADE1 DNA Mariner 1 80 0 1080 275 23 26 chr15 17146583 17146815 -84233706 + L1M4 LINE L1 3355 3586 -3262 3033 100 13 11 chr15 17146815 17147277 -84233244 - L1PA10 LINE L1 0 6168 5706 1080 275 23 26 chr15 17147277 17147692 -84232829 + L1M4 LINE L1 3586 4000 -2848 348 125 0 0 chr15 17147890 17147954 -84232567 + (TCTCTG)n Simple_repeat Simple_repeat 3 66 0 2006 86 50 4 chr15 17147954 17148233 -84232288 - AluY SINE Alu -19 292 1 1839 164 3 3 chr15 17151103 17151396 -84229125 - AluSg1 SINE Alu -15 294 2 1322 139 22 0 chr15 17152069 17152292 -84228229 + L1MA4 LINE L1 6070 6297 -3 2095 126 14 3 chr15 17152351 17152645 -84227876 + AluSx SINE Alu 1 297 -15 387 0 0 0 chr15 17153072 17153115 -84227406 + (TG)n Simple_repeat Simple_repeat 1 43 0 522 329 83 28 chr15 17154243 17154678 -84225843 + L1MCb LINE L1 114 572 -5473 2214 128 0 0 chr15 17156811 17157123 -84223398 - AluSx SINE Alu 0 312 1 476 291 41 67 chr15 17157193 17157268 -84223253 - L1MC/D LINE L1 -2069 5716 5641 2168 91 0 4 chr15 17157268 17157572 -84222949 + AluSg1 SINE Alu 6 308 0 476 291 41 67 chr15 17157572 17157839 -84222682 - L1MC/D LINE L1 -2144 5641 5382 1889 244 65 2 chr15 17157870 17158300 -84222221 + LTR32 LTR ERVL 15 471 0 919 299 19 23 chr15 17158318 17158852 -84221669 + HERVL32 LTR ERVL 19 590 -2828 1747 253 20 44 chr15 17158861 17159418 -84221103 + HERVL32 LTR ERVL 2309 2856 -562 1150 253 37 53 chr15 17159538 17160220 -84220301 + HERVL32 LTR ERVL 612 1326 -2092 * 3173 239 65 63 chr15 17160213 17161265 -84219256 + HERVL32 LTR ERVL 1627 2680 -738 1501 216 24 32 chr15 17161291 17161671 -84218850 + MLT1B LTR MaLR 14 390 0 1238 313 55 43 chr15 17163312 17164072 -84216449 + MER89-int LTR ERV1 3526 4294 -2507 1813 178 41 25 chr15 17164883 17165277 -84215244 - L1MA7 LINE L1 -25 6266 5867 648 49 0 0 chr15 17165283 17165364 -84215157 + L1M3 LINE L1 5389 5469 -865 1719 218 39 13 chr15 17165366 17165751 -84214770 - MSTD LTR MaLR -1 395 1 2207 244 150 55 chr15 17165766 17166117 -84214404 - MSTD-int LTR MaLR -17 1718 1402 5103 38 10 3 chr15 17166117 17166731 -84213790 + L1PA3 LINE L1 5538 6155 0 2207 244 150 55 chr15 17166731 17167181 -84213340 - MSTD-int LTR MaLR -333 1402 841 1600 260 30 2 chr15 17167242 17167673 -84212848 - MSTD-int LTR MaLR -1291 444 2 1434 209 38 62 chr15 17167675 17168048 -84212473 - MSTD LTR MaLR 0 396 33 2064 121 4 0 chr15 17171564 17171867 -84208654 - AluSx SINE Alu 0 304 1 625 255 1 10 chr15 17172592 17172774 -84207747 - L1MB1 LINE L1 0 6168 6008 2490 220 39 15 chr15 17172804 17173443 -84207078 - L1 LINE L1 -1888 4258 3601 1969 89 4 0 chr15 17173443 17173717 -84206804 + AluY SINE Alu 38 312 0 512 208 78 13 chr15 17173739 17173893 -84206628 - L1 LINE L1 -2645 3501 3338 263 234 31 8 chr15 17174244 17174372 -84206149 + (TTA)n Simple_repeat Simple_repeat 3 133 0 24 53 0 0 chr15 17174384 17174422 -84206099 + AT_rich Low_complexity Low_complexity 1 38 0 675 274 145 13 chr15 17174565 17174945 -84205576 + MLT1D LTR MaLR 1 430 -75 3971 258 68 25 chr15 17174955 17177275 -84203246 + HERVL74 LTR ERVL 1196 3652 -2033 522 236 51 67 chr15 17177279 17177457 -84203064 + HERVL74 LTR ERVL 3890 4064 -1621 1063 291 43 39 chr15 17177482 17178106 -84202415 + HERVL74 LTR ERVL 4611 5268 -417 603 268 24 24 chr15 17178124 17178329 -84202192 + HERVL74 LTR ERVL 5393 5597 -88 805 285 43 32 chr15 17178387 17178734 -84201787 + MER74B LTR ERVL 60 410 -212 1662 308 102 34 chr15 17180224 17181197 -84199324 - L1M4b LINE L1 -5814 1045 7 243 299 79 46 chr15 17181202 17181530 -84198991 - L1MCa LINE L1 -4761 1665 1327 11974 201 39 30 chr15 17181719 17185078 -84195443 - L1PA13 LINE L1 -3424 3373 1 2353 211 72 15 chr15 17185084 17185629 -84194892 + L1MC3 LINE L1 5580 6155 -1630 * 8067 202 41 8 chr15 17185624 17188257 -84192264 + L1MA9 LINE L1 3356 6081 -231 466 221 31 0 chr15 17188259 17188386 -84192135 + L1MA9 LINE L1 6180 6310 -2 1448 201 36 0 chr15 17188388 17188747 -84191774 + L1 LINE L1 4300 4671 -1475 775 284 90 8 chr15 17188747 17189113 -84191408 - L2 LINE L2 -1564 1750 1355 21 36 0 0 chr15 17189197 17189225 -84191296 + AT_rich Low_complexity Low_complexity 1 28 0 402 406 31 16 chr15 17189981 17190543 -84189978 + L2 LINE L2 2722 3292 -21 2270 74 3 14 chr15 17193137 17193464 -84187057 + AluY SINE Alu 1 324 0 254 73 24 0 chr15 17193595 17193636 -84186885 + (CAAA)n Simple_repeat Simple_repeat 1 42 0 223 302 16 0 chr15 17193812 17193875 -84186646 + (CA)n Simple_repeat Simple_repeat 1 64 0 2199 184 26 16 chr15 17194026 17194456 -84186065 - Tigger2a DNA MER2_type 0 434 1 279 299 0 59 chr15 17195285 17195472 -84185049 + CT-rich Low_complexity Low_complexity 3 178 0 226 290 32 25 chr15 17196227 17196367 -84184154 + MIR SINE MIR 60 197 -65 279 54 0 0 chr15 17197675 17197712 -84182809 + (TA)n Simple_repeat Simple_repeat 2 38 0 1534 109 23 9 chr15 17197820 17198040 -84182481 + PABL_B LTR ERV1 445 667 0 2197 103 3 7 chr15 17198256 17198557 -84181964 + AluSx SINE Alu 1 300 -12 673 161 0 8 chr15 17198557 17198681 -84181840 - AluJo/FLAM SINE Alu -188 124 2 198 71 0 0 chr15 17199104 17199132 -84181389 + (CA)n Simple_repeat Simple_repeat 2 29 0 291 28 0 0 chr15 17199311 17199347 -84181174 + (CA)n Simple_repeat Simple_repeat 1 36 0 213 94 0 0 chr15 17199434 17199466 -84181055 + (CA)n Simple_repeat Simple_repeat 2 33 0 288 0 0 0 chr15 17199549 17199581 -84180940 + (CA)n Simple_repeat Simple_repeat 2 33 0 2064 117 0 0 chr15 17200000 17200274 -84180247 - AluSx SINE Alu -38 274 1 8767 119 16 2 chr15 17200375 17202172 -84178349 - L1P4 LINE L1 -350 5818 4002 281 291 73 24 chr15 17202556 17202707 -84177814 + MIR3 SINE MIR 4 159 -69 272 254 0 0 chr15 17202764 17202819 -84177702 - L2 LINE L2 -8 3264 3210 296 301 44 18 chr15 17202889 17203002 -84177519 + L1MC5 LINE L1 7798 7913 -48 1696 173 16 36 chr15 17203013 17203320 -84177201 - AluJo SINE Alu -11 301 1 322 291 82 6 chr15 17203323 17203481 -84177040 - MIR SINE MIR -59 203 34 447 19 0 0 chr15 17203994 17204046 -84176475 + (TG)n Simple_repeat Simple_repeat 2 53 0 267 203 0 0 chr15 17205084 17205143 -84175378 + (TG)n Simple_repeat Simple_repeat 1 59 0 267 323 54 8 chr15 17205238 17205368 -84175153 + L3 LINE CR1 243 378 -1199 392 259 105 49 chr15 17205423 17205670 -84174851 - L1MC4a LINE L1 -1642 6166 5906 219 140 0 123 chr15 17206062 17206119 -84174402 + L2 LINE L2 3262 3311 -2 457 298 160 0 chr15 17207195 17207383 -84173138 + MIR SINE MIR 42 259 -3 232 243 186 0 chr15 17207498 17207568 -84172953 + L2 LINE L2 3190 3272 -41 222 118 0 0 chr15 17207585 17207619 -84172902 + (TGAA)n Simple_repeat Simple_repeat 1 34 0 1296 218 19 16 chr15 17210185 17210502 -84170019 + MER65A LTR ERV1 1 318 -127 1094 297 54 50 chr15 17210503 17211147 -84169374 - MER89-int LTR ERV1 -1669 5132 4486 701 229 127 0 chr15 17211770 17211927 -84168594 - MER89-int LTR ERV1 -1594 5207 5031 269 313 88 33 chr15 17213045 17213285 -84167236 + L1MCb LINE L1 571 823 -5222 2424 71 0 3 chr15 17213388 17213685 -84166836 + AluY SINE Alu 1 296 -15 7366 37 6 0 chr15 17213743 17214575 -84165946 + L1PA5 LINE L1 5317 6153 -1 567 286 95 42 chr15 17216961 17217391 -84163130 - L1MC4a LINE L1 -601 5732 5280 279 247 43 0 chr15 17217401 17217494 -84163027 - L1MC4a LINE L1 -853 5293 5197 1221 299 39 29 chr15 17217647 17218268 -84162253 - L1MC3 LINE L1 -621 7164 6538 281 231 11 22 chr15 17218340 17218368 -84162153 + (TAGA)n Simple_repeat Simple_repeat 4 31 -62 186 43 0 0 chr15 17218368 17218391 -84162130 + (CATA)n Simple_repeat Simple_repeat 3 25 0 281 231 11 22 chr15 17218391 17218453 -84162068 + (TAGA)n Simple_repeat Simple_repeat 31 93 0 657 283 52 13 chr15 17218681 17218911 -84161610 - MER89-int LTR ERV1 -3076 3725 3487 1981 203 5 3 chr15 17219240 17219614 -84160907 - L1PA16 LINE L1 -290 5876 5502 397 214 0 0 chr15 17219613 17219697 -84160824 - L1P4 LINE L1 -581 5585 5502 * 501 146 0 0 chr15 17219696 17219778 -84160743 - L1P4 LINE L1 -581 5585 5504 2519 219 23 23 chr15 17219778 17220806 -84159715 - L1P4 LINE L1 -580 5586 4562 4756 254 40 19 chr15 17220812 17222325 -84158196 + L1P4 LINE L1 3001 4544 -1602 793 279 50 47 chr15 17222371 17222751 -84157770 - MER89-int LTR ERV1 -2111 4690 4310 696 320 28 41 chr15 17222749 17223112 -84157409 - MER89-int LTR ERV1 -2647 4154 3797 * 483 299 46 10 chr15 17223158 17223352 -84157169 - MER89-int LTR ERV1 -3095 3706 3506 366 136 0 0 chr15 17223938 17223997 -84156524 + Alu SINE Alu 242 300 -2 1850 155 0 0 chr15 17225522 17225799 -84154722 + AluSx SINE Alu 11 287 -25 1126 228 36 69 chr15 17227072 17227463 -84153058 + MLT1B LTR MaLR 2 379 -11 200 303 108 59 chr15 17228426 17228750 -84151771 - L2 LINE L2 -1648 1666 1327 407 260 69 98 chr15 17228834 17229007 -84151514 - L1M4c LINE L1 -4258 2475 1928 1493 230 22 0 chr15 17229008 17229325 -84151196 + MER7A DNA MER2_type 2 323 -23 2025 126 3 20 chr15 17229330 17229632 -84150889 - AluSx SINE Alu -15 297 1 568 318 30 35 chr15 17229682 17230050 -84150471 - L1M4c LINE L1 -4874 1779 1414 262 340 0 0 chr15 17230341 17230447 -84150074 + L1MCb LINE L1 726 831 -5214 404 152 0 29 chr15 17231892 17231997 -84148524 + (TG)n Simple_repeat Simple_repeat 2 103 0 674 262 83 53 chr15 17233743 17234283 -84146238 - L1MC/D LINE L1 -771 5375 5170 23 33 0 0 chr15 17234308 17234338 -84146183 + AT_rich Low_complexity Low_complexity 1 30 0 2175 277 92 14 chr15 17234449 17235320 -84145201 - L1MC3 LINE L1 -657 7128 6190 391 288 75 27 chr15 17235286 17235581 -84144940 + L1MC3 LINE L1 5904 6212 -1573 * 26 0 0 0 chr15 17235684 17235710 -84144811 + AT_rich Low_complexity Low_complexity 1 26 0 1855 102 102 0 chr15 17239691 17239957 -84140564 + AluSp SINE Alu 1 293 -20 22 35 0 0 chr15 17240049 17240078 -84140443 + AT_rich Low_complexity Low_complexity 1 29 0 264 30 0 0 chr15 17240150 17240183 -84140338 + (TG)n Simple_repeat Simple_repeat 2 34 0 22 0 0 0 chr15 17240195 17240217 -84140304 + AT_rich Low_complexity Low_complexity 1 22 0 424 284 70 0 chr15 17240749 17240950 -84139571 - L1MD3 LINE L1 -11 7984 7770 317 289 86 0 chr15 17241269 17241421 -84139100 - L1MEc LINE L1 -3711 2715 2551 317 291 101 4 chr15 17241509 17241736 -84138785 - L1MEc LINE L1 -4093 2333 2085 236 306 55 25 chr15 17241752 17242091 -84138430 - L1MEc LINE L1 -4395 2031 1680 320 228 30 30 chr15 17243165 17243266 -84137255 + L1ME LINE L1 5698 5798 -368 1174 286 101 14 chr15 17243335 17243970 -84136551 + L1PA13 LINE L1 529 1258 -5529 2358 168 21 9 chr15 17243973 17244397 -84136124 + L1PA13 LINE L1 1396 1824 -4963 * 2959 210 34 16 chr15 17244389 17245127 -84135394 + L1MA7 LINE L1 5541 6291 0 378 279 80 15 chr15 17245150 17245351 -84135170 + L1M4 LINE L1 5184 5397 -749 462 81 23 23 chr15 17245477 17245563 -84134958 + (GAAA)n Simple_repeat Simple_repeat 4 89 0 221 32 0 32 chr15 17245563 17245594 -84134927 + (GGGA)n Simple_repeat Simple_repeat 2 31 0 498 311 0 0 chr15 17246018 17246153 -84134368 + MER70B LTR ERVL 90 224 -354 367 271 211 12 chr15 17246191 17246438 -84134083 - L1MCa LINE L1 -4206 2220 1925 * 1528 160 18 0 chr15 17246430 17246711 -84133810 - L1 LINE L1 -1404 4742 4457 395 174 0 54 chr15 17246730 17246822 -84133699 + L1MA2 LINE L1 6218 6304 0 625 292 65 26 chr15 17246885 17247366 -84133155 + L1MC3 LINE L1 5254 6040 -160 672 305 38 0 chr15 17247504 17247717 -84132804 - HERVL74 LTR ERVL -3785 1900 1680 2035 130 0 17 chr15 17248303 17248596 -84131925 + AluSx SINE Alu 5 292 -20 399 220 0 0 chr15 17248598 17248689 -84131832 + (TA)n Simple_repeat Simple_repeat 1 91 0 3692 35 12 5 chr15 17248862 17249291 -84131230 + L1PA3 LINE L1 5723 6154 -1 1474 277 63 39 chr15 17249292 17250244 -84130277 + L1MA3 LINE L1 2265 3403 -4163 2762 247 38 23 chr15 17250385 17251256 -84129265 + L1P LINE L1 2790 3673 -2473 3642 203 60 5 chr15 17251259 17252130 -84128391 + L1MA3 LINE L1 4418 5336 -2229 * 6489 131 31 1 chr15 17252124 17253204 -84127317 + L1MA3 LINE L1 6614 7724 0 3791 190 51 29 chr15 17253198 17253852 -84126669 + L1 LINE L1 3026 3711 -2435 * 216 0 0 0 chr15 17253852 17253876 -84126645 + (GAAAA)n Simple_repeat Simple_repeat 2 25 0 3791 190 51 29 chr15 17253876 17254216 -84126305 + L1 LINE L1 3711 4042 -2104 1874 204 25 32 chr15 17254218 17254625 -84125896 + MSTB LTR MaLR 23 426 0 713 296 16 11 chr15 17254729 17254915 -84125606 + L2 LINE L2 2889 3075 -238 674 191 0 4 chr15 17254918 17255050 -84125471 + L1MA7 LINE L1 5997 6133 -167 1044 191 123 52 chr15 17255051 17255360 -84125161 + MER2 DNA MER2_type 12 342 -3 608 150 78 7 chr15 17255362 17255515 -84125006 + L1MA8 LINE L1 6107 6270 -21 399 275 69 61 chr15 17255801 17256048 -84124473 + L2 LINE L2 3065 3313 0 36 0 0 0 chr15 17256051 17256087 -84124434 + AT_rich Low_complexity Low_complexity 1 36 0 198 287 0 0 chr15 17256428 17256515 -84124006 + C-rich Low_complexity Low_complexity 1 87 0 1956 137 0 0 chr15 17257020 17257319 -84123202 - AluSq SINE Alu -14 299 1 786 180 0 0 chr15 17257942 17258120 -84122401 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 486 300 33 42 chr15 17258120 17258360 -84122161 - MIR SINE MIR -12 250 13 236 184 224 31 chr15 17258492 17258590 -84121931 - MER103 DNA DNA -43 123 7 1795 239 86 23 chr15 17259446 17259922 -84120599 + MER77 LTR ERV1 64 569 -36 5472 84 5 5 chr15 17260227 17260962 -84119559 - L1PA10 LINE L1 -9 6159 5425 231 319 17 17 chr15 17261063 17261179 -84119342 + G-rich Low_complexity Low_complexity 4 119 0 1815 137 0 0 chr15 17261646 17261930 -84118591 + AluSx SINE Alu 18 301 -11 2171 103 0 10 chr15 17262087 17262397 -84118124 + AluSx SINE Alu 1 307 -5 2017 132 0 0 chr15 17262609 17262913 -84117608 + AluSx SINE Alu 1 304 -8 1335 172 47 0 chr15 17263189 17263445 -84117076 - AluJo SINE Alu -15 297 30 231 175 62 0 chr15 17263482 17263537 -84116984 + Alu SINE Alu 1 50 -253 2682 86 25 171 chr15 17263667 17264227 -84116294 - THE1C-int LTR MaLR -1102 478 1 1753 116 99 63 chr15 17264227 17264275 -84116246 - THE1C LTR MaLR 0 375 330 2144 95 3 0 chr15 17264275 17264609 -84115912 - AluY SINE Alu 0 335 1 2241 87 3 3 chr15 17264610 17264910 -84115611 - AluY SINE Alu -11 300 1 1753 116 99 63 chr15 17264910 17265220 -84115301 - THE1C LTR MaLR -44 331 1 834 181 0 62 chr15 17265220 17265238 -84115283 - AluJo SINE Alu -161 151 133 2222 90 0 3 chr15 17265238 17265538 -84114983 - AluY SINE Alu -12 299 1 1936 143 0 3 chr15 17265538 17265838 -84114683 - AluSx SINE Alu -12 300 1 834 181 0 62 chr15 17265838 17265978 -84114543 - AluJo SINE Alu -177 135 2 676 138 35 9 chr15 17265978 17266094 -84114427 - MLT1D LTR MaLR -386 119 1 250 276 198 0 chr15 17266180 17266295 -84114226 + Charlie7 DNA MER1_type 29 166 -2446 302 275 24 0 chr15 17266295 17266415 -84114106 - LTR50 LTR ERVL 0 795 402 959 273 85 48 chr15 17266491 17266546 -84113975 + Charlie7 DNA MER1_type 220 271 -2341 1704 178 0 3 chr15 17266546 17266850 -84113671 - AluJo SINE Alu -6 306 4 959 273 85 48 chr15 17266850 17267278 -84113243 + Charlie7 DNA MER1_type 271 721 -1891 407 261 5 72 chr15 17267277 17267327 -84113194 + Charlie7 DNA MER1_type 2420 2472 -140 * 2069 114 7 0 chr15 17267327 17267617 -84112904 + AluSx SINE Alu 1 292 -20 407 261 5 72 chr15 17267617 17267773 -84112748 + Charlie7 DNA MER1_type 2472 2612 0 2078 121 3 0 chr15 17267817 17268115 -84112406 + AluSq SINE Alu 1 299 -14 202 321 0 18 chr15 17268325 17268381 -84112140 - L2 LINE L2 -209 3063 3009 323 190 0 0 chr15 17268394 17268452 -84112069 - THE1A LTR MaLR -76 279 222 244 250 0 0 chr15 17268483 17268527 -84111994 + AluJ/monomer SINE Alu 1 44 -89 293 151 31 0 chr15 17268646 17268710 -84111811 + MIR SINE MIR 75 146 -62 320 294 0 12 chr15 17269460 17269545 -84110976 + MIR SINE MIR 5 88 -174 251 288 129 23 chr15 17269720 17269852 -84110669 - L1ME4a LINE L1 -38 6083 5938 411 252 64 9 chr15 17272115 17272242 -84108279 + MIR SINE MIR 34 173 -62 275 190 17 17 chr15 17272687 17272745 -84107776 - MLT1K LTR MaLR -8 580 523 28 29 0 0 chr15 17272750 17272785 -84107736 + AT_rich Low_complexity Low_complexity 1 35 0 2218 83 0 3 chr15 17272791 17273080 -84107441 - AluSq SINE Alu -25 288 1 485 200 147 74 chr15 17273081 17273271 -84107250 - MLT1K LTR MaLR -58 530 327 435 234 8 62 chr15 17273330 17273458 -84107063 + MLT1G LTR MaLR 93 213 -377 396 193 125 0 chr15 17273462 17273550 -84106971 + MLT1G LTR MaLR 471 569 -21 980 170 0 6 chr15 17273976 17274147 -84106374 + AluJb SINE Alu 121 290 -22 1905 155 0 13 chr15 17274150 17274466 -84106055 + AluSx SINE Alu 1 312 0 851 232 171 20 chr15 17274703 17275026 -84105495 - MLT1J LTR MaLR 0 493 139 2376 190 17 85 chr15 17275032 17275547 -84104974 - MER41D LTR ERV1 -22 535 61 2127 109 0 28 chr15 17275547 17275868 -84104653 - AluSq SINE Alu -1 312 1 2376 190 17 85 chr15 17275868 17275926 -84104595 - MER41D LTR ERV1 -496 61 1 500 259 30 15 chr15 17275926 17276061 -84104460 - MLT1J LTR MaLR -371 140 4 2011 90 54 0 chr15 17276141 17276420 -84104101 + AluY SINE Alu 1 294 -17 353 266 146 70 chr15 17276420 17276547 -84103974 + MIR SINE MIR 22 138 -124 1486 189 34 0 chr15 17276547 17276844 -84103677 - AluJo SINE Alu -5 307 1 373 221 110 31 chr15 17276845 17277008 -84103513 + MER104 DNA MER2_type 2 177 -3 353 266 146 70 chr15 17277008 17277077 -84103444 + MIR SINE MIR 137 235 -27 772 84 6 39 chr15 17277387 17277565 -84102956 + (TTAGGG)n Simple_repeat Simple_repeat 5 176 0 518 152 5 33 chr15 17277626 17277810 -84102711 + (TTAGGG)n Simple_repeat Simple_repeat 2 180 0 402 147 0 37 chr15 17277854 17277963 -84102558 + (TTAGGG)n Simple_repeat Simple_repeat 4 108 0 914 258 119 12 chr15 17277994 17278413 -84102108 - MLT1C LTR MaLR -3 464 1 1758 154 0 14 chr15 17279180 17279465 -84101056 - AluJo SINE Alu -21 291 11 1720 252 89 19 chr15 17279484 17280047 -84100474 - MER20B DNA MER1_type -34 749 148 688 268 10 20 chr15 17280413 17280611 -84099910 + MIR SINE MIR 17 212 -50 2126 113 7 0 chr15 17280618 17280919 -84099602 - AluSp SINE Alu -10 303 1 1607 233 37 17 chr15 17281063 17281509 -84099012 - L1MB5 LINE L1 -58 6116 5665 203 276 181 9 chr15 17281572 17281677 -84098844 + MIR SINE MIR 31 153 -109 818 242 14 28 chr15 17281842 17282053 -84098468 - MER63A DNA MER1_type 0 210 3 285 286 164 21 chr15 17282287 17282427 -84098094 + MLT1L LTR MaLR 226 385 -230 1964 107 0 0 chr15 17282931 17283194 -84097327 + AluSc SINE Alu 16 278 -31 183 80 0 0 chr15 17283197 17283222 -84097299 + (CAAT)n Simple_repeat Simple_repeat 2 26 0 1038 126 16 33 chr15 17284660 17284842 -84095679 + AluJo SINE Alu 39 217 -95 266 152 0 0 chr15 17284843 17284894 -84095627 + AluJb SINE Alu 84 125 -177 1308 167 0 67 chr15 17284921 17285220 -84095301 + AluJo SINE Alu 7 285 -27 1946 117 0 0 chr15 17285244 17285518 -84095003 + AluSx SINE Alu 1 274 -38 306 0 0 0 chr15 17285937 17285971 -84094550 + (TG)n Simple_repeat Simple_repeat 2 35 0 213 94 0 0 chr15 17286054 17286086 -84094435 + (TG)n Simple_repeat Simple_repeat 2 33 0 315 0 0 0 chr15 17286171 17286206 -84094315 + (TG)n Simple_repeat Simple_repeat 1 35 0 198 71 0 0 chr15 17286385 17286413 -84094108 + (TG)n Simple_repeat Simple_repeat 2 29 0 369 0 0 0 chr15 17286502 17286543 -84093978 + (TG)n Simple_repeat Simple_repeat 1 41 0 198 71 0 0 chr15 17286722 17286750 -84093771 + (TG)n Simple_repeat Simple_repeat 2 29 0 707 153 0 8 chr15 17287173 17287297 -84093224 + AluJo/FLAM SINE Alu 2 124 -188 2122 107 3 0 chr15 17287297 17287596 -84092925 - AluSx SINE Alu -12 300 1 1055 127 0 13 chr15 17287812 17287969 -84092552 - PABL_B LTR ERV1 0 667 513 421 239 75 93 chr15 17288525 17288996 -84091525 + L1ME2 LINE L1 1790 6101 -132 2091 114 13 0 chr15 17289057 17289363 -84091158 + AluSg SINE Alu 1 310 0 225 171 0 0 chr15 17289390 17289431 -84091090 + L1ME2 LINE L1 6179 6219 -14 662 235 47 35 chr15 17289785 17289955 -84090566 + MIR SINE MIR 69 240 -22 31439 105 8 20 chr15 17290955 17296423 -84084098 + L1PA7 LINE L1 1 5487 -982 258 56 0 0 chr15 17296423 17296459 -84084062 + (CAAA)n Simple_repeat Simple_repeat 1 36 0 31439 105 8 20 chr15 17296459 17297403 -84083118 + L1PA7 LINE L1 5487 6440 -29 887 208 62 21 chr15 17297403 17297644 -84082877 + MER96B DNA MER1_type? 144 394 -23 33 80 0 0 chr15 17297884 17297959 -84082562 + AT_rich Low_complexity Low_complexity 1 75 0 222 370 0 0 chr15 17298102 17298202 -84082319 + GA-rich Low_complexity Low_complexity 3 102 0 3159 121 11 6 chr15 17298289 17298759 -84081762 + MER84 LTR ERVI 36 507 0 1011 105 0 25 chr15 17299268 17299430 -84081091 + L1P4 LINE L1 5333 5490 -671 2467 47 0 19 chr15 17299430 17299747 -84080774 + AluY SINE Alu 1 311 0 2070 264 99 42 chr15 17299937 17300505 -84080016 - L1M4 LINE L1 -1822 4324 3790 2188 84 7 0 chr15 17300505 17300802 -84079719 + AluY SINE Alu 1 299 -12 2070 264 99 42 chr15 17300802 17301376 -84079145 - L1M4 LINE L1 -2356 3790 3117 * 3324 157 51 16 chr15 17301375 17302194 -84078327 - L1PA15 LINE L1 -324 5841 4984 775 41 0 10 chr15 17302194 17302291 -84078230 + L1PA4 LINE L1 6057 6152 -3 3324 157 51 16 chr15 17302291 17302606 -84077915 - L1PA15 LINE L1 -1181 4984 4681 9612 237 22 37 chr15 17302607 17306939 -84073582 - L1PA12 LINE L1 -816 6768 2554 6392 231 31 15 chr15 17306964 17308690 -84071831 + L1PA15 LINE L1 2143 3896 -2250 1704 196 43 0 chr15 17308679 17309051 -84071470 + L1PA15 LINE L1 4846 5233 -913 * 1088 99 13 0 chr15 17309053 17309204 -84071317 + AluSc SINE Alu 150 302 -7 2260 101 0 3 chr15 17309214 17309510 -84071011 + AluSq SINE Alu 1 295 -18 5110 127 6 10 chr15 17309511 17310322 -84070199 + L1PA15 LINE L1 5357 6164 -1 1077 290 110 54 chr15 17310368 17312528 -84067993 - L1PA12 LINE L1 -5025 2556 22 204 140 40 20 chr15 17312749 17312799 -84067722 + T-rich Low_complexity Low_complexity 5 55 0 1857 220 80 78 chr15 17313475 17314112 -84066409 + LTR9B LTR ERV1 7 644 0 401 158 29 0 chr15 17314297 17314436 -84066085 + (TA)n Simple_repeat Simple_repeat 2 144 0 43 0 0 0 chr15 17314441 17314484 -84066037 + AT_rich Low_complexity Low_complexity 1 43 0 201 379 107 12 chr15 17314612 17314781 -84065740 + L2 LINE L2 2725 2909 -405 250 258 11 75 chr15 17314793 17314886 -84065635 + L2 LINE L2 3184 3270 -2 351 280 57 45 chr15 17316234 17316391 -84064130 + L1ME1 LINE L1 5998 6156 -10 1829 154 32 0 chr15 17317127 17317412 -84063109 + AluSx SINE Alu 1 294 -18 23 0 0 0 chr15 17318380 17318403 -84062118 + AT_rich Low_complexity Low_complexity 1 23 0 249 328 0 35 chr15 17318470 17318644 -84061877 + T-rich Low_complexity Low_complexity 2 169 0 39 22 0 0 chr15 17320813 17320859 -84059662 + AT_rich Low_complexity Low_complexity 1 46 0 716 307 137 30 chr15 17321418 17322142 -84058379 - L2 LINE L2 -34 3279 2474 28 79 0 0 chr15 17322212 17322275 -84058246 + AT_rich Low_complexity Low_complexity 1 63 0 1663 268 39 40 chr15 17322434 17323113 -84057408 - L1ME2 LINE L1 -16 6148 5465 1754 191 148 41 chr15 17323116 17323604 -84056917 + MER74A LTR ERVL 19 558 0 437 194 31 0 chr15 17324118 17324216 -84056305 - L1ME2 LINE L1 -744 5418 5318 527 244 39 17 chr15 17324258 17324488 -84056033 - L1ME2 LINE L1 -916 5230 4996 1847 164 13 0 chr15 17324600 17324905 -84055616 + AluSx SINE Alu 1 309 -3 3137 167 22 4 chr15 17325031 17325571 -84054950 + MER44D DNA MER2_type 1 605 0 385 226 11 11 chr15 17325571 17325656 -84054865 + L1MC4 LINE L1 6616 6703 -1339 180 0 0 0 chr15 17325656 17325676 -84054845 + (TG)n Simple_repeat Simple_repeat 2 21 0 26 82 0 0 chr15 17326033 17326094 -84054427 + AT_rich Low_complexity Low_complexity 1 61 0 711 203 120 52 chr15 17326586 17326778 -84053743 - MER20 DNA MER1_type -2 217 13 23 0 0 0 chr15 17330535 17330558 -84049963 + AT_rich Low_complexity Low_complexity 1 23 0 462 18 0 0 chr15 17332121 17332176 -84048345 + (CA)n Simple_repeat Simple_repeat 1 55 0 370 289 141 34 chr15 17332384 17332527 -84047994 - L2 LINE L2 0 3313 3187 223 27 27 27 chr15 17332527 17332564 -84047957 + (TAAAA)n Simple_repeat Simple_repeat 2 38 0 370 289 141 34 chr15 17332564 17332683 -84047838 - L2 LINE L2 -126 3187 3023 404 316 188 31 chr15 17332834 17332977 -84047544 - L2 LINE L2 0 3313 3194 223 27 27 27 chr15 17332977 17333014 -84047507 + (TAAAA)n Simple_repeat Simple_repeat 2 38 0 404 316 188 31 chr15 17333014 17333284 -84047237 - L2 LINE L2 -119 3194 2835 212 390 39 0 chr15 17333348 17333425 -84047096 - L2 LINE L2 -582 2732 2653 432 0 0 0 chr15 17333435 17333483 -84047038 + (TA)n Simple_repeat Simple_repeat 2 49 0 270 259 89 27 chr15 17334161 17334273 -84046248 + MIR3 SINE MIR 82 200 -8 270 242 17 39 chr15 17334682 17334860 -84045661 + (TTATA)n Simple_repeat Simple_repeat 2 175 0 298 90 51 13 chr15 17334862 17334940 -84045581 + (TA)n Simple_repeat Simple_repeat 2 82 0 1768 145 28 3 chr15 17334988 17335270 -84045251 - MER72 LTR ERV1 0 722 434 1691 191 3 7 chr15 17335272 17335571 -84044950 - MER72 LTR ERV1 -420 302 5 574 206 59 7 chr15 17335581 17335717 -84044804 + MIR SINE MIR 45 187 -75 305 309 100 0 chr15 17335976 17336086 -84044435 + L2 LINE L2 3152 3272 0 22498 28 0 0 chr15 17336434 17339913 -84040608 + L1PA2 LINE L1 2702 6180 0 2341 194 27 27 chr15 17341114 17341636 -84038885 + L1MA9 LINE L1 5267 5783 -385 674 336 47 26 chr15 17341631 17342059 -84038462 + L1MA9 LINE L1 1360 1796 -5700 * 1021 274 102 85 chr15 17342158 17343148 -84037373 - MER52A LTR ERV1 0 1755 630 11615 218 67 27 chr15 17343210 17347879 -84032642 + L1MA9 LINE L1 2061 7021 -710 2428 128 8 31 chr15 17347879 17348263 -84032258 + THE1C LTR MaLR 1 375 0 11615 218 67 27 chr15 17348263 17349005 -84031516 + L1MA9 LINE L1 7021 7731 0 301 98 0 20 chr15 17349000 17349051 -84031470 + L1MA9 LINE L1 5771 5820 -492 * 2026 157 31 19 chr15 17349057 17349472 -84031049 + L1MA9 LINE L1 5892 6311 -1 426 217 33 0 chr15 17349985 17350077 -84030444 + U13 snRNA snRNA 1 95 -9 719 317 117 14 chr15 17350136 17350717 -84029804 - HAL1 LINE L1 -726 1781 1141 424 280 45 91 chr15 17351243 17351486 -84029035 - HAL1 LINE L1 -2185 322 91 204 216 39 0 chr15 17352742 17352793 -84027728 + A-rich Low_complexity Low_complexity 4 56 0 24 0 0 0 chr15 17354484 17354508 -84026013 + AT_rich Low_complexity Low_complexity 1 24 0 456 325 74 12 chr15 17355237 17355400 -84025121 + MIR SINE MIR 20 192 -70 432 263 109 6 chr15 17355616 17355772 -84024749 - MIR SINE MIR 0 262 91 980 144 0 0 chr15 17355938 17356084 -84024437 - AluSg/x SINE Alu -23 289 144 1071 269 13 8 chr15 17356273 17356511 -84024010 - MIR SINE MIR -22 240 2 711 265 59 14 chr15 17357258 17357477 -84023044 + MIR SINE MIR 33 261 -1 180 363 99 0 chr15 17358696 17358787 -84021734 - L2 LINE L2 0 3272 3173 229 318 47 54 chr15 17358886 17359015 -84021506 - MIR3 SINE MIR -31 177 50 215 61 30 0 chr15 17359407 17359440 -84021081 + (TC)n Simple_repeat Simple_repeat 1 34 0 395 200 27 36 chr15 17360067 17360177 -84020344 + L1MA8 LINE L1 6180 6288 -3 457 189 147 32 chr15 17360440 17360630 -84019891 + L1MC3 LINE L1 7574 7785 0 2397 144 100 4 chr15 17360718 17361168 -84019353 - L1PA16 LINE L1 -2 6164 5672 420 49 98 0 chr15 17361186 17361308 -84019213 + (TA)n Simple_repeat Simple_repeat 1 134 0 2034 187 21 15 chr15 17361346 17362035 -84018486 - L1PA16 LINE L1 -534 5632 4939 * 2978 215 12 19 chr15 17362034 17362805 -84017716 + L1PB4 LINE L1 3061 3825 -2321 2107 113 21 0 chr15 17363727 17364018 -84016503 + AluSq SINE Alu 1 297 -16 1341 222 50 7 chr15 17364441 17364743 -84015778 + MSTB LTR MaLR 100 414 -12 748 155 0 0 chr15 17365016 17365132 -84015389 - AluSg/x SINE Alu -21 291 176 271 259 52 26 chr15 17365142 17365258 -84015263 - HAL1b LINE L1 -539 809 691 340 238 156 19 chr15 17365317 17365477 -84015044 - L1ME3A LINE L1 -182 5988 5807 825 61 4 7 chr15 17365597 17365722 -84014799 + MER30B DNA MER1_type 4 106 -84 261 57 0 0 chr15 17365847 17365882 -84014639 + (TC)n Simple_repeat Simple_repeat 1 35 0 362 275 62 42 chr15 17365892 17366097 -84014424 + MLT1B LTR MaLR 181 367 -7 825 291 55 30 chr15 17366212 17366610 -84013911 + MLT1B-int LTR MaLR 264 671 -700 411 358 19 35 chr15 17366909 17367166 -84013355 + MLT1B-int LTR MaLR 1238 1490 -245 3856 218 37 9 chr15 17367866 17369163 -84011358 + L1PB4 LINE L1 4814 6152 -4 21 0 0 0 chr15 17369179 17369200 -84011321 + AT_rich Low_complexity Low_complexity 1 21 0 2078 118 7 11 chr15 17369234 17369512 -84011009 + AluSg SINE Alu 3 281 -29 234 81 0 0 chr15 17369512 17369549 -84010972 + (TATAA)n Simple_repeat Simple_repeat 2 38 0 1476 264 56 38 chr15 17369561 17370322 -84010199 + L1MD2 LINE L1 5117 5896 -463 1762 312 117 26 chr15 17370324 17371414 -84009107 - L1M4b LINE L1 -5650 1209 21 234 262 48 64 chr15 17371479 17371666 -84008855 - L1M1 LINE L1 -4708 1718 1422 622 240 89 27 chr15 17372041 17372266 -84008255 - LTR52-int LTR ERVL -3297 259 21 1019 250 47 47 chr15 17372317 17372697 -84007824 - LTR52 LTR ERVL -38 383 4 4029 201 52 5 chr15 17373058 17373931 -84006590 - MER49 LTR ERV1 -9 914 1 355 248 128 18 chr15 17373937 17374046 -84006475 - MER89-int LTR ERV1 -1653 5148 5028 24 0 0 0 chr15 17374046 17374070 -84006451 + AT_rich Low_complexity Low_complexity 1 24 0 486 266 146 31 chr15 17375858 17376084 -84004437 - MIR SINE MIR 0 262 11 366 311 16 8 chr15 17376135 17376257 -84004264 + MIR SINE MIR 74 196 -66 310 265 183 27 chr15 17376340 17376515 -84004006 - MIR SINE MIR -40 222 30 3130 21 5 3 chr15 17377451 17377825 -84002696 - L1PA4 LINE L1 -5 6150 5776 4364 34 0 0 chr15 17377825 17378349 -84002172 + L1PA4 LINE L1 5275 5798 -357 421 287 28 101 chr15 17378674 17378921 -84001600 - MLT1J LTR MaLR -9 502 274 24 0 0 0 chr15 17379348 17379372 -84001149 + AT_rich Low_complexity Low_complexity 1 24 0 7545 24 7 0 chr15 17379430 17380684 -83999837 + L1PA3 LINE L1 4910 6169 0 22 0 0 0 chr15 17380688 17380710 -83999811 + AT_rich Low_complexity Low_complexity 1 22 0 250 260 111 52 chr15 17383195 17383381 -83997140 - MIR SINE MIR -67 195 4 382 250 167 21 chr15 17383543 17383831 -83996690 + L1ME4a LINE L1 5781 6110 -11 492 204 0 0 chr15 17384006 17384099 -83996422 + LTR55 LTR ERV 1 93 -455 717 266 31 0 chr15 17384126 17384348 -83996173 + LTR55 LTR ERV 235 463 -85 444 352 142 4 chr15 17384803 17385084 -83995437 - L3 LINE CR1 -159 1418 1099 2309 168 44 36 chr15 17386166 17386697 -83993824 - Ricksha DNA DNA -18 3228 2745 1128 167 33 12 chr15 17386697 17386937 -83993584 + L1MA5 LINE L1 6056 6300 0 2309 168 44 36 chr15 17386937 17386953 -83993568 - Ricksha DNA DNA -501 2745 2731 2509 120 69 5 chr15 17388357 17388765 -83991756 - MER57B LTR ERV1 0 434 1 5419 56 0 9 chr15 17389072 17389765 -83990756 - L1PA7 LINE L1 -1 6153 5467 3208 86 8 1 chr15 17389765 17390299 -83990222 + L1PA7 LINE L1 4936 5471 -701 308 207 17 0 chr15 17390299 17390357 -83990164 - MER5A DNA MER1_type -118 71 13 225 361 45 69 chr15 17390625 17391002 -83989519 - L2 LINE L2 0 3313 2946 * 237 343 56 9 chr15 17390996 17391104 -83989417 - L2 LINE L2 -579 2735 2623 940 151 11 11 chr15 17391136 17391315 -83989206 - Looper DNA T2_type -1376 182 4 341 156 52 0 chr15 17391457 17391534 -83988987 + L1MB5 LINE L1 6028 6108 -66 1053 295 91 15 chr15 17391691 17392098 -83988423 + LTR16C LTR ERVL 37 474 -17 497 331 81 73 chr15 17392156 17392714 -83987807 - L2 LINE L2 -934 2380 1819 734 305 5 0 chr15 17392734 17392924 -83987597 + L2 LINE L2 2885 3075 -238 619 159 26 0 chr15 17392927 17393040 -83987481 + L1MA9 LINE L1 5993 6108 -204 1070 210 0 0 chr15 17393041 17393246 -83987275 + MER2 DNA MER2_type 1 205 -140 398 222 14 0 chr15 17393280 17393352 -83987169 + MER2 DNA MER2_type 270 342 -3 982 123 67 20 chr15 17393356 17393551 -83986970 + L1MA9 LINE L1 6109 6312 0 321 313 78 39 chr15 17393562 17393792 -83986729 + L2 LINE L2 3075 3313 0 30 0 0 0 chr15 17393793 17393823 -83986698 + AT_rich Low_complexity Low_complexity 1 30 0 202 73 49 0 chr15 17395155 17395196 -83985325 + (TA)n Simple_repeat Simple_repeat 2 44 0 1600 158 3 74 chr15 17396153 17396464 -83984057 - AluJb SINE Alu -20 292 4 254 342 13 0 chr15 17396685 17396764 -83983757 + MER5A DNA MER1_type 110 189 0 1137 268 37 12 chr15 17396991 17397526 -83982995 + L1M3c LINE L1 2155 2977 -4519 747 244 114 55 chr15 17397527 17398203 -83982318 + L1M3c LINE L1 2843 3558 -4007 1099 219 0 0 chr15 17398217 17398427 -83982094 + MER2 DNA MER2_type 1 210 -135 4924 244 48 26 chr15 17398534 17400276 -83980245 + L1M3c LINE L1 3566 5344 -2221 2174 130 0 0 chr15 17400277 17400584 -83979937 + AluSc SINE Alu 1 307 -2 8462 185 24 7 chr15 17400588 17402115 -83978406 + L1M1 LINE L1 10 1561 -6004 403 337 96 11 chr15 17402791 17402969 -83977552 + MIR3 SINE MIR 2 194 -14 3214 34 0 3 chr15 17405585 17405971 -83974550 + L1PA5 LINE L1 5763 6147 -7 33 0 0 0 chr15 17405974 17406007 -83974514 + AT_rich Low_complexity Low_complexity 1 33 0 1607 165 28 31 chr15 17406242 17406594 -83973927 - L1MA7 LINE L1 0 6291 5941 2533 184 13 4 chr15 17406595 17407058 -83973463 + L1MA7 LINE L1 5436 5902 -389 496 293 88 61 chr15 17407257 17407542 -83972979 - LTR67 LTR ERVL -4 553 250 2233 81 10 10 chr15 17407542 17407849 -83972672 - AluY SINE Alu -4 307 1 496 293 88 61 chr15 17407849 17408004 -83972517 - LTR67 LTR ERVL -307 250 101 405 0 0 0 chr15 17408097 17408142 -83972379 + (CA)n Simple_repeat Simple_repeat 2 46 0 1085 167 44 4 chr15 17409396 17409623 -83970898 + MER33 DNA MER1_type 1 236 -88 835 256 90 50 chr15 17409919 17410220 -83970301 + L2 LINE L2 2995 3307 -6 189 228 51 51 chr15 17410269 17410348 -83970173 - L2 LINE L2 -71 3242 3164 3604 43 11 0 chr15 17411978 17412417 -83968104 - L1PA4 LINE L1 -136 6019 5576 219 298 181 11 chr15 17413543 17413637 -83966884 - L2 LINE L2 -5 3308 3199 497 274 67 0 chr15 17416470 17416605 -83963916 + MLT1J1 LTR MaLR 28 171 -275 2163 122 7 3 chr15 17416769 17417073 -83963448 + AluSx SINE Alu 1 305 -7 520 295 32 26 chr15 17417994 17418184 -83962337 - MLT1I LTR MaLR -218 191 1 22 0 0 0 chr15 17418363 17418385 -83962136 + AT_rich Low_complexity Low_complexity 1 22 0 187 361 0 12 chr15 17418870 17418953 -83961568 - L2 LINE L2 -2 3311 3230 736 301 82 75 chr15 17418996 17419691 -83960830 - L2 LINE L2 -926 2388 1689 679 180 0 0 chr15 17420185 17420313 -83960208 - L1MA4 LINE L1 -10 6290 6163 561 287 54 49 chr15 17420320 17420632 -83959889 - L1MC4a LINE L1 -1879 5929 5613 2242 117 0 0 chr15 17420632 17420932 -83959589 - AluSx SINE Alu -12 300 1 561 287 54 49 chr15 17420932 17420988 -83959533 - L1MC4a LINE L1 -2195 5613 5559 897 97 28 0 chr15 17421699 17421844 -83958677 - L1MA6 LINE L1 0 6300 6152 2276 101 10 0 chr15 17421909 17422207 -83958314 - AluSg SINE Alu -9 301 1 288 53 0 0 chr15 17422926 17422964 -83957557 + (CA)n Simple_repeat Simple_repeat 1 38 0 206 215 0 114 chr15 17423374 17423453 -83957068 - MIR SINE MIR -97 165 96 255 339 170 27 chr15 17424395 17424725 -83955796 + L2 LINE L2 2463 2839 -475 565 321 27 0 chr15 17425416 17425600 -83954921 - MIR SINE MIR -6 256 68 204 211 0 0 chr15 17425737 17425775 -83954746 + (CA)n Simple_repeat Simple_repeat 1 38 0 11353 165 19 0 chr15 17425840 17427968 -83952553 + L1PA13 LINE L1 2006 4188 -2609 1439 126 82 0 chr15 17427943 17428198 -83952323 + L1PA13 LINE L1 4426 4701 -2096 * 723 150 136 7 chr15 17428208 17428348 -83952173 + Tigger1 DNA MER2_type 2259 2416 -2 368 310 32 39 chr15 17428763 17428918 -83951603 + MIR SINE MIR 1 154 -108 23 54 0 0 chr15 17429109 17429146 -83951375 + AT_rich Low_complexity Low_complexity 1 37 0 32 57 0 0 chr15 17429363 17429416 -83951105 + AT_rich Low_complexity Low_complexity 1 53 0 3069 166 11 23 chr15 17430034 17430391 -83950130 - Tigger3b DNA MER2_type -2463 565 216 2326 81 0 0 chr15 17430391 17430686 -83949835 - AluY SINE Alu -16 295 1 3069 166 11 23 chr15 17430686 17430900 -83949621 - Tigger3b DNA MER2_type -2812 216 1 919 242 83 91 chr15 17431998 17433301 -83947220 - HSREP522 Satellite telomeric 0 1291 1 213 65 0 0 chr15 17435116 17435147 -83945374 + (TCTA)n Simple_repeat Simple_repeat 4 34 0 297 351 54 30 chr15 17435410 17435578 -83944943 + MIR SINE MIR 19 190 -72 377 257 68 24 chr15 17438997 17439203 -83941318 - LTR37B LTR ERV1 0 468 254 426 92 77 0 chr15 17439203 17439268 -83941253 + L1PA13 LINE L1 6088 6157 -6 235 211 0 18 chr15 17439316 17439373 -83941148 - LTR37B LTR ERV1 -221 247 192 4689 140 19 8 chr15 17439525 17440323 -83940198 - L1MA2 LINE L1 0 6304 5498 7540 164 24 3 chr15 17440449 17441885 -83938636 - L1MA2 LINE L1 -883 5263 3798 2154 132 3 23 chr15 17441885 17442271 -83938250 + L1MA2 LINE L1 5926 6304 0 2170 113 0 28 chr15 17442292 17442799 -83937722 + AluSq SINE Alu 1 313 0 419 167 11 0 chr15 17442817 17442907 -83937614 + GA-rich Low_complexity Low_complexity 2 92 0 7478 179 43 18 chr15 17442915 17444809 -83935712 + L1M2 LINE L1 3663 5620 -680 191 216 0 0 chr15 17444820 17444857 -83935664 + L2 LINE L2 3277 3313 0 822 322 77 53 chr15 17449351 17450083 -83930438 + ERVL LTR ERVL 3603 4351 -1413 2128 110 0 31 chr15 17451454 17451773 -83928748 - AluSg SINE Alu -1 309 1 1505 186 144 42 chr15 17452720 17453124 -83927397 + L1P LINE L1 3282 3726 -2420 2281 103 0 0 chr15 17453191 17453483 -83927038 + AluSc SINE Alu 1 292 -17 482 266 146 31 chr15 17459152 17459378 -83921143 - MIR SINE MIR 0 262 11 360 311 16 8 chr15 17459429 17459551 -83920970 + MIR SINE MIR 74 196 -66 309 265 183 27 chr15 17459634 17459809 -83920712 - MIR SINE MIR -40 222 30 189 0 0 0 chr15 17460558 17460579 -83919942 + (CAGAGA)n Simple_repeat Simple_repeat 4 24 0 3206 19 5 0 chr15 17460753 17461128 -83919393 - L1PA4 LINE L1 -3 6152 5776 4195 32 0 0 chr15 17461128 17461652 -83918869 + L1PA4 LINE L1 5275 5798 -357 363 257 41 76 chr15 17461977 17462148 -83918373 - MLT1J LTR MaLR -9 502 338 24 0 0 0 chr15 17462650 17462674 -83917847 + AT_rich Low_complexity Low_complexity 1 24 0 7083 25 6 0 chr15 17462732 17463951 -83916570 + L1PA3 LINE L1 4910 6135 -20 220 67 0 44 chr15 17463962 17464007 -83916514 + (TAAA)n Simple_repeat Simple_repeat 3 45 0 238 271 99 55 chr15 17466489 17466666 -83913855 - MIR SINE MIR -67 195 16 317 225 79 22 chr15 17466835 17467013 -83913508 + L1ME4a LINE L1 5781 5968 -153 461 204 0 0 chr15 17467298 17467391 -83913130 + LTR55 LTR ERV 1 93 -455 671 252 33 0 chr15 17467418 17467632 -83912889 + LTR55 LTR ERV 235 455 -93 433 365 126 3 chr15 17468101 17468386 -83912135 - L3 LINE CR1 -159 1418 1099 2172 165 44 36 chr15 17469467 17469998 -83910523 - Ricksha DNA DNA -18 3228 2745 1104 167 33 12 chr15 17469998 17470238 -83910283 + L1MA5 LINE L1 6056 6300 0 2172 165 44 36 chr15 17470238 17470254 -83910267 - Ricksha DNA DNA -501 2745 2731 2481 123 69 5 chr15 17471665 17472073 -83908448 - MER57B LTR ERV1 0 434 1 5389 59 0 9 chr15 17472380 17473073 -83907448 - L1PA7 LINE L1 -1 6153 5467 3076 82 10 0 chr15 17473073 17473606 -83906915 + L1PA7 LINE L1 4936 5471 -701 326 190 17 0 chr15 17473606 17473664 -83906857 - MER5A DNA MER1_type -118 71 13 245 355 45 71 chr15 17473932 17474310 -83906211 - L2 LINE L2 0 3313 2946 237 343 56 9 chr15 17474304 17474412 -83906109 - L2 LINE L2 -579 2735 2623 * 886 151 11 11 chr15 17474444 17474623 -83905898 - Looper DNA T2_type -1376 182 4 320 156 52 0 chr15 17474765 17474842 -83905679 + L1MB5 LINE L1 6028 6108 -66 906 298 91 15 chr15 17475000 17475406 -83905115 + LTR16C LTR ERVL 38 474 -17 521 332 66 73 chr15 17475464 17476036 -83904485 - L2 LINE L2 -934 2380 1813 744 305 5 0 chr15 17476041 17476231 -83904290 + L2 LINE L2 2885 3075 -238 570 168 26 0 chr15 17476234 17476347 -83904174 + L1MA9 LINE L1 5993 6108 -204 971 219 0 0 chr15 17476348 17476553 -83903968 + MER2 DNA MER2_type 1 205 -140 374 222 14 0 chr15 17476587 17476659 -83903862 + MER2 DNA MER2_type 270 342 -3 949 118 67 20 chr15 17476663 17476858 -83903663 + L1MA7 LINE L1 6109 6312 0 288 317 78 39 chr15 17476869 17477099 -83903422 + L2 LINE L2 3075 3313 0 30 0 0 0 chr15 17477100 17477130 -83903391 + AT_rich Low_complexity Low_complexity 1 30 0 202 73 49 0 chr15 17478462 17478503 -83902018 + (TA)n Simple_repeat Simple_repeat 1 43 0 1628 159 3 73 chr15 17479460 17479774 -83900747 - AluJb SINE Alu -20 292 1 245 354 13 0 chr15 17479991 17480070 -83900451 + MER5A DNA MER1_type 110 189 0 1067 263 39 12 chr15 17480297 17480831 -83899690 + L1M3c LINE L1 2155 2977 -4519 586 246 114 55 chr15 17480832 17481508 -83899013 + L1M3c LINE L1 2843 3558 -4007 1057 214 0 0 chr15 17481522 17481732 -83898789 + MER2 DNA MER2_type 1 210 -135 4454 242 51 28 chr15 17481837 17483576 -83896945 + L1M3c LINE L1 3566 5344 -2221 2204 130 0 0 chr15 17483577 17483884 -83896637 + AluSc SINE Alu 1 307 -2 7916 185 24 7 chr15 17483888 17485415 -83895106 + L1M1 LINE L1 10 1561 -6004 403 337 96 11 chr15 17486091 17486269 -83894252 + MIR3 SINE MIR 2 194 -14 3206 36 0 3 chr15 17488884 17489270 -83891251 + L1PA5 LINE L1 5763 6147 -7 38 0 0 0 chr15 17489273 17489311 -83891210 + AT_rich Low_complexity Low_complexity 1 38 0 1610 164 25 31 chr15 17489546 17489899 -83890622 - L1MA7 LINE L1 0 6291 5941 2390 184 13 4 chr15 17489900 17490363 -83890158 + L1MA7 LINE L1 5436 5902 -389 357 293 88 61 chr15 17490562 17490847 -83889674 - LTR67 LTR ERVL -4 553 250 2257 82 10 10 chr15 17490847 17491153 -83889368 - AluY SINE Alu -5 306 1 357 293 88 61 chr15 17491153 17491308 -83889213 - LTR67 LTR ERVL -307 250 101 297 0 0 0 chr15 17491401 17491434 -83889087 + (CA)n Simple_repeat Simple_repeat 2 34 0 1020 167 44 4 chr15 17492690 17492917 -83887604 + MER33 DNA MER1_type 1 236 -88 831 256 90 50 chr15 17493213 17493514 -83887007 + L2 LINE L2 2995 3307 -6 184 228 51 51 chr15 17493563 17493642 -83886879 - L2 LINE L2 -71 3242 3164 3418 37 18 0 chr15 17495269 17495706 -83884815 - L1PA4 LINE L1 -135 6020 5576 218 304 196 0 chr15 17496832 17496924 -83883597 - L2 LINE L2 -5 3308 3199 194 290 87 0 chr15 17497900 17497969 -83882552 + MER5A DNA MER1_type 2 76 -113 2663 277 21 39 chr15 17497970 17499519 -83881002 + L1M3b LINE L1 3 1287 -4994 17996 33 9 0 chr15 17499520 17502484 -83878037 + L1PA3 LINE L1 3178 6155 0 470 293 54 0 chr15 17502485 17502652 -83877869 - MST-int LTR MaLR -314 1337 1162 272 291 12 23 chr15 17503789 17503875 -83876646 + GA-rich Low_complexity Low_complexity 6 90 0 1410 173 111 43 chr15 17504048 17504419 -83876102 - MSTD LTR MaLR 0 396 1 570 173 7 13 chr15 17504885 17505035 -83875486 + (TCCA)n Simple_repeat Simple_repeat 4 152 0 2319 102 0 0 chr15 17505206 17505510 -83875011 - AluSx SINE Alu -8 304 1 2270 102 16 0 chr15 17505987 17506290 -83874231 - AluY SINE Alu -3 308 1 247 319 132 0 chr15 17506475 17506566 -83873955 + L2 LINE L2 3168 3270 -2 23 0 0 0 chr15 17506606 17506629 -83873892 + AT_rich Low_complexity Low_complexity 1 23 0 2058 113 28 3 chr15 17506908 17507199 -83873322 - AluSx SINE Alu -14 298 1 2398 85 0 19 chr15 17507421 17507738 -83872783 - AluY SINE Alu 0 311 1 723 189 0 8 chr15 17507796 17507928 -83872593 - FLAM_C SINE Alu -2 131 1 264 214 36 12 chr15 17508463 17508547 -83871974 + (CAGAGA)n Simple_repeat Simple_repeat 5 90 0 2336 110 0 0 chr15 17509241 17509541 -83870980 + AluSx SINE Alu 1 300 -12 2094 109 7 14 chr15 17509838 17510122 -83870399 + AluJb SINE Alu 24 305 -7 1406 180 32 18 chr15 17510412 17510690 -83869831 + AluJo SINE Alu 1 282 -30 1055 39 0 0 chr15 17511026 17511154 -83869367 - L1PA4 LINE L1 -1 6154 6027 622 132 0 0 chr15 17511154 17511245 -83869276 + FLAM_C SINE Alu 33 123 -20 566 157 0 0 chr15 17511470 17511559 -83868962 + AluJ/FLAM SINE Alu 2 90 -222 1696 143 0 104 chr15 17513208 17513543 -83866978 - AluSx SINE Alu -11 301 2 21 36 0 0 chr15 17514448 17514476 -83866045 + AT_rich Low_complexity Low_complexity 1 28 0 404 253 10 10 chr15 17515562 17515661 -83864860 - MER94 DNA DNA -34 100 2 348 281 74 35 chr15 17518369 17518600 -83861921 + MIR SINE MIR 16 255 -7 23 33 0 0 chr15 17518876 17518906 -83861615 + AT_rich Low_complexity Low_complexity 1 30 0 1974 124 11 3 chr15 17519429 17519712 -83860809 - AluSq SINE Alu -20 293 9 2069 149 0 0 chr15 17522997 17523305 -83857216 - AluSx SINE Alu -4 308 1 2151 123 0 7 chr15 17523312 17523613 -83856908 - AluY SINE Alu -10 301 3 464 291 11 22 chr15 17523688 17523867 -83856654 + MIR SINE MIR 85 261 -1 1570 96 5 0 chr15 17523903 17524157 -83856364 - AluSg/x SINE Alu 0 335 81 2090 315 116 16 chr15 17524158 17525234 -83855287 - L1M4 LINE L1 -1281 4865 3682 * 5032 150 62 6 chr15 17525233 17526139 -83854382 - L1MA7 LINE L1 -1 6290 5334 3888 196 68 17 chr15 17526133 17527087 -83853434 + L1 LINE L1 4121 5123 -1023 * 461 273 80 45 chr15 17527087 17527647 -83852874 - L1M4 LINE L1 -2442 3704 3125 33 0 0 0 chr15 17527664 17527697 -83852824 + AT_rich Low_complexity Low_complexity 1 33 0 2653 11 0 0 chr15 17529065 17529347 -83851174 + AluY SINE Alu 1 282 -29 2208 102 0 49 chr15 17529781 17530105 -83850416 + AluSx SINE Alu 1 308 -4 332 257 203 51 chr15 17530106 17530421 -83850100 + L1MB7 LINE L1 5301 5663 -2145 240 35 0 0 chr15 17532146 17532175 -83848346 + (A)n Simple_repeat Simple_repeat 1 29 0 1474 226 58 0 chr15 17532815 17533143 -83847378 + MER7A DNA MER2_type 1 345 -1 195 42 0 0 chr15 17533213 17533237 -83847284 + (TAAAAA)n Simple_repeat Simple_repeat 2 25 0 1562 236 63 5 chr15 17534241 17534668 -83845853 + L1MB7 LINE L1 5733 6184 0 21 0 0 0 chr15 17535074 17535095 -83845426 + AT_rich Low_complexity Low_complexity 1 21 0 1872 159 0 3 chr15 17535095 17535384 -83845137 - AluJo SINE Alu -24 288 1 275 236 114 24 chr15 17536021 17536144 -83844377 - MIR SINE MIR -57 205 72 243 297 11 22 chr15 17537252 17537343 -83843178 + (CA)n Simple_repeat Simple_repeat 1 90 0 24 0 0 0 chr15 17538665 17538689 -83841832 + GC_rich Low_complexity Low_complexity 1 24 0 299 224 7 48 chr15 17538689 17538879 -83841642 + G-rich Low_complexity Low_complexity 1 182 0 181 79 0 53 chr15 17539249 17539287 -83841234 + (CGG)n Simple_repeat Simple_repeat 2 37 0 406 236 57 0 chr15 17539743 17539866 -83840655 + MIR SINE MIR 25 154 -108 608 158 0 0 chr15 17540499 17540594 -83839927 + FLAM_A SINE Alu 16 110 -32 1866 163 10 0 chr15 17541014 17541303 -83839218 + AluJb SINE Alu 1 292 -20 303 187 99 22 chr15 17541427 17541518 -83839003 + MIR SINE MIR 50 147 -61 1079 205 157 40 chr15 17541693 17542068 -83838453 + MLT1C LTR MaLR 6 424 -43 305 303 20 79 chr15 17543858 17543945 -83836576 + MER5A DNA MER1_type 47 123 -66 1921 124 32 3 chr15 17543945 17544227 -83836294 - AluSx SINE Alu -22 290 1 305 303 20 79 chr15 17544227 17544291 -83836230 + MER5A DNA MER1_type 123 189 0 234 266 31 0 chr15 17544411 17544475 -83836046 - MIR SINE MIR -118 144 79 251 281 24 72 chr15 17544636 17544803 -83835718 - L1MC4 LINE L1 -1 8041 7883 356 93 59 42 chr15 17544950 17545068 -83835453 + (CA)n Simple_repeat Simple_repeat 1 120 0 462 142 40 28 chr15 17545131 17545307 -83835214 + (TG)n Simple_repeat Simple_repeat 1 178 0 385 133 66 18 chr15 17545362 17545528 -83834993 + (TG)n Simple_repeat Simple_repeat 2 175 0 180 259 19 0 chr15 17545968 17546022 -83834499 - MIR SINE MIR -124 84 30 302 220 128 0 chr15 17546201 17546310 -83834211 - MIR SINE MIR -80 182 60 2165 108 21 0 chr15 17546933 17547221 -83833300 - AluSx SINE Alu -18 294 1 1708 154 31 35 chr15 17547470 17547607 -83832914 - MLT1D LTR MaLR -9 496 360 2316 96 0 0 chr15 17547607 17547909 -83832612 - AluY SINE Alu -9 302 1 1708 154 31 35 chr15 17547909 17548089 -83832432 - MLT1D LTR MaLR -145 360 180 1649 122 4 4 chr15 17548093 17548330 -83832191 - AluJo SINE Alu 0 312 76 1019 98 7 14 chr15 17548331 17548474 -83832047 - THE1C LTR MaLR -233 142 1 4957 92 63 11 chr15 17548474 17549168 -83831353 - THE1C-int LTR MaLR 0 1580 851 821 122 0 0 chr15 17549168 17549283 -83831238 - AluSg/x SINE Alu -10 302 188 308 286 62 43 chr15 17549485 17549646 -83830875 - L1ME LINE L1 -4882 1660 1497 294 302 46 49 chr15 17549664 17549876 -83830645 - L1ME LINE L1 -5063 1571 1360 2291 99 10 0 chr15 17549876 17550178 -83830343 - AluSg SINE Alu -5 305 1 294 302 46 49 chr15 17550178 17550396 -83830125 - L1ME LINE L1 -5274 1360 1142 952 375 19 19 chr15 17551167 17551753 -83828768 + L1PA16 LINE L1 788 1373 -6201 332 296 10 10 chr15 17551894 17551992 -83828529 + L1PA16 LINE L1 2085 2182 -5399 11450 234 84 21 chr15 17552312 17556459 -83824062 + L1PA16 LINE L1 2271 6794 -810 1540 167 50 56 chr15 17556459 17556836 -83823685 - THE1C LTR MaLR 0 375 1 11450 234 84 21 chr15 17556836 17557697 -83822824 + L1PA16 LINE L1 6794 7599 -5 585 272 131 22 chr15 17558154 17558617 -83821904 - MLT1E1 LTR MaLR -1 653 5 277 267 58 97 chr15 17559207 17559589 -83820932 + HAL1 LINE L1 750 1116 -1391 421 264 138 54 chr15 17559650 17560040 -83820481 + HAL1b LINE L1 417 839 -509 308 306 37 96 chr15 17560209 17560480 -83820041 + HAL1b LINE L1 1051 1305 -43 1916 108 41 10 chr15 17560520 17560815 -83819706 - AluSx SINE Alu -8 304 1 745 144 17 0 chr15 17561938 17562056 -83818465 + FRAM SINE Alu 43 162 -14 219 296 120 28 chr15 17562058 17562166 -83818355 - MIR SINE MIR -55 207 90 38636 39 4 0 chr15 17562330 17567832 -83812689 + L1PA4 LINE L1 632 6152 -3 204 122 0 0 chr15 17568017 17568058 -83812463 + (T)n Simple_repeat Simple_repeat 1 41 0 4260 167 50 11 chr15 17568725 17569574 -83810947 + L1MC1 LINE L1 5452 6333 0 335 281 24 85 chr15 17570726 17570890 -83809631 + MIR3 SINE MIR 25 178 -30 336 340 21 14 chr15 17571081 17571225 -83809296 - MLT-int LTR MaLR -1209 526 382 344 187 42 69 chr15 17571426 17571561 -83808960 - MLT1H1 LTR MaLR -24 531 423 258 278 44 44 chr15 17571781 17571871 -83808650 - MLT1H LTR MaLR -346 203 114 1305 97 0 0 chr15 17572224 17572389 -83808132 - AluSc SINE Alu -13 296 132 2283 98 0 3 chr15 17572389 17572694 -83807827 - AluY SINE Alu -7 304 1 2680 13 16 0 chr15 17573796 17574111 -83806410 + L1PA2 LINE L1 5834 6153 -2 941 310 89 19 chr15 17574142 17574583 -83805938 + L1ME3A LINE L1 3281 3690 -2456 2571 135 14 36 chr15 17574583 17575027 -83805494 - Tigger2a DNA MER2_type 0 434 1 941 310 89 19 chr15 17575027 17575711 -83804810 + L1ME3A LINE L1 3690 4484 -1662 283 302 94 44 chr15 17575892 17576190 -83804331 + L1ME3A LINE L1 4901 5213 -933 * 287 295 53 54 chr15 17576185 17576459 -83804062 + L1P5 LINE L1 5270 5541 -615 3658 198 62 22 chr15 17576460 17577688 -83802833 + L1MB4 LINE L1 4903 6180 0 321 248 124 0 chr15 17577720 17577841 -83802680 + L1ME3A LINE L1 5561 5696 -474 451 290 83 5 chr15 17577861 17578078 -83802443 + L1ME3A LINE L1 5756 5989 -181 1677 184 31 0 chr15 17578766 17579054 -83801467 + AluJb SINE Alu 3 299 -13 3589 256 23 13 chr15 17579054 17580096 -83800425 - L1P LINE L1 -4028 2118 1067 3858 165 90 4 chr15 17580096 17580817 -83799704 + L1PA8 LINE L1 5390 6172 0 21 82 0 0 chr15 17580904 17580953 -83799568 + AT_rich Low_complexity Low_complexity 1 49 0 2025 138 0 10 chr15 17581117 17581408 -83799113 - AluSx SINE Alu -24 288 1 180 210 210 0 chr15 17581492 17581554 -83798967 + L3 LINE CR1 1355 1429 -148 244 331 61 14 chr15 17582695 17582843 -83797678 + MIR SINE MIR 51 205 -57 29 84 0 0 chr15 17583587 17583658 -83796863 + AT_rich Low_complexity Low_complexity 1 71 0 331 294 119 23 chr15 17585291 17585509 -83795012 + L1 LINE L1 2679 2917 -3229 2036 179 40 0 chr15 17585597 17585728 -83794793 + L1P LINE L1 4264 4388 -1758 333 0 0 0 chr15 17585728 17585765 -83794756 + (CA)n Simple_repeat Simple_repeat 1 37 0 2036 179 40 0 chr15 17585765 17586035 -83794486 + L1P LINE L1 4388 4681 -1465 * 5116 159 44 12 chr15 17586032 17586730 -83793791 + L1MA7 LINE L1 5064 5816 -475 225 0 0 0 chr15 17586730 17586755 -83793766 + (CA)n Simple_repeat Simple_repeat 2 26 0 5116 159 44 12 chr15 17586755 17587247 -83793274 + L1MA7 LINE L1 5816 6291 0 342 280 74 50 chr15 17587456 17588045 -83792476 + L1 LINE L1 4059 4665 -1481 1161 264 86 23 chr15 17588188 17589018 -83791503 + L1MDa LINE L1 2394 3283 -3257 1538 198 74 14 chr15 17589155 17589599 -83790922 + L1M4 LINE L1 4181 4651 -1495 193 195 0 0 chr15 17590219 17590260 -83790261 + MIR SINE MIR 172 212 -50 2794 163 0 25 chr15 17592103 17592613 -83787908 + LOR1a LTR ERV1 1 497 0 251 284 4 13 chr15 17592771 17592847 -83787674 - MIR SINE MIR -64 144 65 335 240 74 50 chr15 17593004 17593125 -83787396 - L2 LINE L2 -3 3310 3187 289 292 142 31 chr15 17593269 17593495 -83787026 - MIR SINE MIR 0 262 12 292 313 134 8 chr15 17593775 17593909 -83786612 - MIR SINE MIR -71 191 41 1574 214 70 62 chr15 17594071 17594135 -83786386 - MLT1D LTR MaLR 0 505 443 1846 101 79 8 chr15 17594135 17594402 -83786119 + AluSc SINE Alu 1 286 -23 1574 214 70 62 chr15 17594402 17594838 -83785683 - MLT1D LTR MaLR -62 443 1 238 279 63 13 chr15 17594852 17594931 -83785590 - L2 LINE L2 0 3313 3231 185 372 13 13 chr15 17594947 17595025 -83785496 - L2 LINE L2 -214 3058 2981 7175 44 5 0 chr15 17595277 17596428 -83784093 - L1PA3 LINE L1 -18 6137 4984 524 281 0 16 chr15 17598041 17598169 -83782352 + L2 LINE L2 3188 3313 0 229 85 0 43 chr15 17598752 17598799 -83781722 + (TC)n Simple_repeat Simple_repeat 2 46 0 207 0 0 0 chr15 17598799 17598822 -83781699 + (CA)n Simple_repeat Simple_repeat 1 23 0 270 193 59 30 chr15 17598836 17598971 -83781550 + (CA)n Simple_repeat Simple_repeat 1 139 0 378 0 0 0 chr15 17599007 17599049 -83781472 + (CA)n Simple_repeat Simple_repeat 1 42 0 2032 128 3 10 chr15 17599356 17599654 -83780867 + AluSx SINE Alu 5 300 -12 182 392 35 40 chr15 17599928 17600155 -83780366 - L2 LINE L2 -343 2971 2746 329 314 71 59 chr15 17600898 17601153 -83779368 + MIR SINE MIR 2 259 -3 1247 229 167 24 chr15 17601422 17601877 -83778644 + MLT2B1 LTR ERVL 1 520 0 2388 227 68 12 chr15 17602004 17602590 -83777931 - MER82 DNA MER2_type -1 652 34 6912 72 0 2 chr15 17603246 17604871 -83775650 - L1PA8 LINE L1 0 6172 4551 5959 58 1 4 chr15 17604871 17605644 -83774877 + L1P LINE L1 3651 4421 -1725 1027 288 45 49 chr15 17605723 17606192 -83774329 - HERV16 LTR ERVL -4336 660 194 339 254 61 26 chr15 17606231 17606345 -83774176 - HERV16 LTR ERVL -4794 202 85 1706 67 43 67 chr15 17606347 17606602 -83773919 - AluY SINE Alu -9 302 54 191 114 29 0 chr15 17606705 17606740 -83773781 + GA-rich Low_complexity Low_complexity 2 37 0 876 188 109 0 chr15 17608479 17608514 -83772007 + AluJb SINE Alu 88 118 -194 477 0 0 0 chr15 17608514 17608567 -83771954 + (CA)n Simple_repeat Simple_repeat 2 54 0 876 188 109 0 chr15 17608567 17608723 -83771798 + AluJb SINE Alu 118 300 -12 2286 93 0 3 chr15 17608723 17609034 -83771487 + AluSp SINE Alu 1 310 -3 262 238 131 0 chr15 17609620 17609704 -83770817 + L1MC5 LINE L1 7001 7095 -866 2138 105 0 3 chr15 17609749 17610045 -83770476 - AluSx SINE Alu -17 295 1 1386 185 57 4 chr15 17610047 17610328 -83770193 - AluJo SINE Alu -16 296 1 1871 126 3 30 chr15 17611347 17611649 -83768872 + AluSq SINE Alu 1 294 -19 1513 178 13 7 chr15 17611671 17611974 -83768547 + AluJb SINE Alu 6 310 -2 780 207 36 16 chr15 17612310 17612717 -83767804 + MLT1D LTR MaLR 5 458 -47 228 302 83 0 chr15 17612713 17612809 -83767712 + U13 snRNA snRNA 1 104 0 * 345 186 0 14 chr15 17612827 17612897 -83767624 + MLT1D LTR MaLR 430 498 -7 486 0 0 0 chr15 17614175 17614229 -83766292 + (CA)n Simple_repeat Simple_repeat 2 55 0 539 256 56 17 chr15 17616133 17616313 -83764208 + MER47A DNA MER2_type 1 187 -179 929 122 0 67 chr15 17616313 17616477 -83764044 + AluJo SINE Alu 1 153 -159 4411 224 57 46 chr15 17616580 17618006 -83762515 - L1MDa LINE L1 -2364 4176 2767 1995 110 28 7 chr15 17618006 17618297 -83762224 - AluSq SINE Alu -16 297 1 4411 224 57 46 chr15 17618297 17618730 -83761791 - L1MDa LINE L1 -3773 2767 2340 1617 161 83 9 chr15 17618730 17619066 -83761455 + MER46B DNA MER2_type 1 236 0 4411 224 57 46 chr15 17619066 17619875 -83760646 - L1MDa LINE L1 -4200 2340 1483 192 40 0 0 chr15 17619875 17619900 -83760621 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 390 134 0 0 chr15 17619922 17619989 -83760532 + (TCCCG)n Simple_repeat Simple_repeat 4 70 0 1729 149 4 0 chr15 17619991 17620266 -83760255 - AluSg SINE Alu -34 276 1 315 217 86 57 chr15 17621758 17621933 -83758588 - L1MC4a LINE L1 -1926 5882 5703 2245 94 0 3 chr15 17621935 17622244 -83758277 + AluSq SINE Alu 1 308 -5 936 61 0 0 chr15 17622613 17622727 -83757794 - AluY SINE Alu -197 114 1 530 295 70 44 chr15 17622730 17623184 -83757337 - L1MC5 LINE L1 -179 7782 7317 362 214 32 97 chr15 17623352 17623506 -83757015 - L1MC5 LINE L1 -861 7100 6957 514 231 35 35 chr15 17623560 17623763 -83756758 - L1M4 LINE L1 -3097 3049 2847 350 267 22 0 chr15 17623831 17623921 -83756600 - L1M4 LINE L1 -3327 2819 2728 1836 164 0 0 chr15 17626026 17626313 -83754208 + AluJb SINE Alu 1 287 -25 2167 96 7 0 chr15 17626322 17626614 -83753907 + AluSq SINE Alu 1 294 -19 244 367 61 0 chr15 17627050 17627148 -83753373 - L2 LINE L2 -1 3271 3168 2257 85 3 0 chr15 17630415 17630709 -83749812 - AluSc SINE Alu -14 295 1 2055 227 70 39 chr15 17631172 17631759 -83748762 - MER77 LTR ERV1 0 605 1 1032 254 53 22 chr15 17631913 17632236 -83748285 + MER58B DNA MER1_type 4 336 -5 22 0 0 0 chr15 17632406 17632428 -83748093 + AT_rich Low_complexity Low_complexity 1 22 0 3787 193 62 59 chr15 17634858 17635674 -83744847 - L1MB5 LINE L1 0 6174 5361 2262 103 0 0 chr15 17635674 17635985 -83744536 - AluSx SINE Alu -1 311 1 3787 193 62 59 chr15 17635985 17636878 -83743643 - L1MB5 LINE L1 -813 5361 4457 1519 206 69 43 chr15 17636883 17637024 -83743497 - L1MB5 LINE L1 -2486 3660 3524 2327 70 0 0 chr15 17637024 17637324 -83743197 - AluY SINE Alu -11 300 1 1519 206 69 43 chr15 17637324 17637567 -83742954 - L1MB5 LINE L1 -2622 3524 3256 2147 99 0 13 chr15 17637567 17637870 -83742651 - AluSc SINE Alu 0 309 11 1519 206 69 43 chr15 17637870 17638019 -83742502 - L1MB5 LINE L1 -2890 3256 3112 926 199 0 5 chr15 17638024 17638220 -83742301 - AluJb SINE Alu 0 312 118 1398 223 58 17 chr15 17638220 17638683 -83741838 - L1MB5 LINE L1 -3052 3094 2613 1514 151 0 44 chr15 17638816 17639087 -83741434 + AluJb SINE Alu 23 281 -31 213 139 0 0 chr15 17639102 17639145 -83741376 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 219 181 56 0 chr15 17639145 17639217 -83741304 + (TA)n Simple_repeat Simple_repeat 2 77 0 1907 266 47 46 chr15 17639223 17640192 -83740329 - HERVL68 LTR ERVL -1920 1117 60 2332 176 109 0 chr15 17640200 17640705 -83739816 - MER68 LTR ERV1 -2 560 1 314 257 121 36 chr15 17640707 17640847 -83739674 - L1ME LINE L1 -339 5782 5631 1508 172 80 43 chr15 17643886 17644298 -83736223 - MLT1C LTR MaLR 0 467 1 871 239 128 51 chr15 17644299 17644688 -83735833 - MLT1C LTR MaLR -46 421 3 343 315 6 0 chr15 17645515 17645680 -83734841 + (TG)n Simple_repeat Simple_repeat 1 166 0 790 142 0 0 chr15 17646157 17646277 -83734244 + FLAM_A SINE Alu 20 139 -3 2116 108 0 13 chr15 17647102 17647409 -83733112 + AluSg SINE Alu 1 303 -7 2140 86 7 13 chr15 17649047 17649351 -83731170 - AluSx SINE Alu -10 302 1 316 217 217 19 chr15 17649374 17649480 -83731041 - L1ME4a LINE L1 0 6121 5995 338 248 10 0 chr15 17651517 17651616 -83728905 + MER5A DNA MER1_type 10 98 -80 2282 87 0 0 chr15 17651850 17652150 -83728371 + AluY SINE Alu 3 302 -9 856 135 0 81 chr15 17652150 17652335 -83728186 + AluSg/x SINE Alu 132 301 -9 979 197 170 3 chr15 17652479 17652631 -83727890 + MER2 DNA MER2_type 2 127 -217 2433 77 0 0 chr15 17652631 17652942 -83727579 + AluY SINE Alu 1 311 0 979 197 170 3 chr15 17652942 17653083 -83727438 + MER2 DNA MER2_type 127 344 0 268 119 174 55 chr15 17653185 17653294 -83727227 + L1ME4a LINE L1 5999 6120 -1 935 178 40 0 chr15 17654338 17654512 -83726009 + MER58A DNA MER1_type 44 224 0 279 255 149 56 chr15 17655029 17655190 -83725331 - LTR16A LTR ERVL -93 357 182 528 157 88 0 chr15 17655271 17655373 -83725148 - MER20 DNA MER1_type -32 187 77 194 281 103 62 chr15 17655836 17655982 -83724539 + MIR SINE MIR 52 203 -59 204 163 23 0 chr15 17656006 17656049 -83724472 + (TA)n Simple_repeat Simple_repeat 1 44 0 198 358 70 30 chr15 17657046 17657187 -83723334 + MIR3 SINE MIR 14 158 -78 23 0 0 0 chr15 17657571 17657594 -83722927 + AT_rich Low_complexity Low_complexity 1 23 0 21 0 0 0 chr15 17657807 17657828 -83722693 + AT_rich Low_complexity Low_complexity 1 21 0 245 300 43 0 chr15 17658198 17658268 -83722253 + L2 LINE L2 3198 3270 -2 53 30 0 0 chr15 17658805 17658872 -83721649 + AT_rich Low_complexity Low_complexity 1 67 0 1715 216 71 16 chr15 17659567 17659992 -83720529 - L1MB4 LINE L1 -2 6178 5731 1309 121 0 0 chr15 17659997 17660179 -83720342 - L1PA10 LINE L1 0 6168 5987 418 351 18 0 chr15 17660204 17660369 -83720152 + L2 LINE L2 1847 2014 -1300 6170 247 64 40 chr15 17661716 17663955 -83716566 - L1MD2 LINE L1 -18 6601 4234 2089 173 64 50 chr15 17663955 17664377 -83716144 - MSTA LTR MaLR 0 428 1 6170 247 64 40 chr15 17664377 17665989 -83714532 - L1MD2 LINE L1 -2385 4234 2661 440 123 27 0 chr15 17666335 17666408 -83714113 + MSTD LTR MaLR 322 396 0 550 251 18 54 chr15 17666408 17666575 -83713946 - L1MD2 LINE L1 -5861 548 388 1112 292 16 7 chr15 17666584 17666892 -83713629 - L1MD2 LINE L1 -6079 330 20 602 223 117 51 chr15 17669493 17669767 -83710754 + MLT1C LTR MaLR 3 294 -173 242 182 0 0 chr15 17669775 17669819 -83710702 + MLT1C LTR MaLR 445 488 -17 192 182 0 0 chr15 17670063 17670107 -83710414 + (TTCA)n Simple_repeat Simple_repeat 4 47 0 308 276 153 79 chr15 17671346 17671574 -83708947 + L1M2 LINE L1 816 1060 -5789 230 230 230 0 chr15 17671927 17672001 -83708520 - L2 LINE L2 -619 2695 2605 308 308 0 0 chr15 17672029 17672107 -83708414 - L2 LINE L2 0 3272 3195 837 52 0 63 chr15 17672399 17672590 -83707931 + (GCTG)n Simple_repeat Simple_repeat 2 180 0 839 56 0 66 chr15 17672621 17673000 -83707521 + (GCTG)n Simple_repeat Simple_repeat 2 533 0 576 71 0 82 chr15 17673035 17673219 -83707302 + (GCTG)n Simple_repeat Simple_repeat 2 170 0 303 292 96 90 chr15 17673220 17673363 -83707158 - L1M2 LINE L1 -5491 1358 1217 817 41 0 77 chr15 17673363 17673558 -83706963 + (GCTG)n Simple_repeat Simple_repeat 1 180 0 303 292 96 90 chr15 17673558 17673780 -83706741 - L1M2 LINE L1 -5632 1217 987 809 52 0 68 chr15 17673780 17673972 -83706549 + (GCTG)n Simple_repeat Simple_repeat 2 180 0 303 292 96 90 chr15 17673972 17674115 -83706406 - L1M2 LINE L1 -5862 987 846 * 312 246 88 107 chr15 17674088 17674442 -83706079 - L1M2 LINE L1 -5484 1365 1019 435 61 0 61 chr15 17674453 17674552 -83705969 + (GCTG)n Simple_repeat Simple_repeat 2 94 0 960 31 0 65 chr15 17674565 17674949 -83705572 + (GCTG)n Simple_repeat Simple_repeat 1 358 0 322 278 60 114 chr15 17674973 17675698 -83704823 - L1M2 LINE L1 -5497 1352 846 * 899 64 0 70 chr15 17675500 17675868 -83704653 + (GCTG)n Simple_repeat Simple_repeat 1 342 0 702 92 0 65 chr15 17675884 17676253 -83704268 + (GCTG)n Simple_repeat Simple_repeat 1 344 0 1225 121 23 0 chr15 17676253 17676426 -83704095 - AluSg/x SINE Alu -40 272 96 346 148 0 0 chr15 17676428 17676482 -83704039 + Alu SINE Alu 246 299 -3 367 276 4 15 chr15 17676494 17676760 -83703761 + (CA)n Simple_repeat Simple_repeat 1 262 0 327 25 0 0 chr15 17677963 17678003 -83702518 + (TTA)n Simple_repeat Simple_repeat 3 42 0 557 186 0 0 chr15 17678003 17678105 -83702416 - L1PA16 LINE L1 -25 6141 6040 2430 92 0 0 chr15 17678240 17678543 -83701978 + AluSx SINE Alu 1 303 -9 1365 183 2 10 chr15 17678648 17679086 -83701435 - L1PA16 LINE L1 -133 6033 5718 899 144 12 12 chr15 17679079 17679239 -83701282 - L1PA16 LINE L1 -245 5921 5762 * 1002 145 0 6 chr15 17679239 17679398 -83701123 - L1PA16 LINE L1 -247 5919 5762 925 152 6 6 chr15 17679399 17679557 -83700964 - L1PA16 LINE L1 -248 5918 5761 1531 161 15 68 chr15 17679558 17679790 -83700731 - L1PA16 LINE L1 -249 5917 5705 2069 113 7 0 chr15 17679790 17680072 -83700449 + AluSx SINE Alu 23 306 -6 1531 161 15 68 chr15 17680072 17680163 -83700358 - L1PA16 LINE L1 -461 5705 5611 1745 152 7 112 chr15 17680168 17680440 -83700081 - L1PA16 LINE L1 -22 6144 5930 3374 103 0 2 chr15 17680440 17680888 -83699633 + L1PA7 LINE L1 5708 6154 0 1745 152 7 112 chr15 17680888 17681035 -83699486 - L1PA16 LINE L1 -236 5930 5769 288 87 0 0 chr15 17681032 17681078 -83699443 + L1PA13 LINE L1 5989 6034 -129 * 2052 135 0 0 chr15 17681082 17681370 -83699151 + AluSx SINE Alu 1 288 -24 2000 95 23 56 chr15 17681865 17682005 -83698516 + AluSg SINE Alu 1 144 -166 2295 98 0 13 chr15 17682005 17682312 -83698209 + AluY SINE Alu 1 303 -8 2000 95 23 56 chr15 17682312 17682476 -83698045 + AluSg SINE Alu 144 295 -15 641 211 0 0 chr15 17682564 17682668 -83697853 + FLAM_C SINE Alu 2 105 -38 3141 264 33 6 chr15 17682669 17683488 -83697033 - ERVL LTR ERVL -3750 2014 1174 313 146 10 21 chr15 17683491 17683587 -83696934 + (CCAA)n Simple_repeat Simple_repeat 1 95 0 852 238 21 0 chr15 17683589 17683772 -83696749 - ERVL LTR ERVL -4575 1189 1002 222 37 0 0 chr15 17683772 17683799 -83696722 + (TG)n Simple_repeat Simple_repeat 2 28 0 4753 169 23 40 chr15 17683811 17684718 -83695803 - MER49 LTR ERV1 -2 921 30 337 182 0 0 chr15 17684818 17684884 -83695637 - MER72 LTR ERV1 -656 66 1 238 323 30 0 chr15 17684896 17684995 -83695526 - MLT2C1 LTR ERVL -59 338 237 334 244 25 59 chr15 17685012 17685131 -83695390 - MLT2C1 LTR ERVL -281 116 2 277 281 156 15 chr15 17685445 17685580 -83694941 - MIR SINE MIR -72 190 37 242 364 23 8 chr15 17686358 17686490 -83694031 + MIR SINE MIR 3 136 -126 440 227 100 0 chr15 17686847 17686957 -83693564 + MLT1D LTR MaLR 385 505 0 373 242 68 43 chr15 17688698 17688859 -83691662 + MIR3 SINE MIR 3 167 -41 2147 130 0 3 chr15 17689637 17689945 -83690576 + AluSq SINE Alu 1 307 -6 230 221 117 52 chr15 17690813 17690890 -83689631 - MER67D LTR ERV1 -303 211 130 * 904 257 15 20 chr15 17690870 17691196 -83689325 - MER34C LTR ERV1 -155 430 63 6674 34 4 0 chr15 17691934 17692672 -83687849 + L1PA5 LINE L1 5408 6148 -6 270 297 22 0 chr15 17693446 17693537 -83686984 - L2 LINE L2 -5 3308 3216 1849 161 10 26 chr15 17695564 17695875 -83684646 - AluSp SINE Alu -7 306 1 2072 140 0 0 chr15 17696247 17696540 -83683981 + AluSx SINE Alu 1 293 -19 208 314 0 0 chr15 17696710 17696780 -83683741 - MIR SINE MIR -8 254 185 3671 175 5 14 chr15 17697091 17697755 -83682766 - L1MA5 LINE L1 -1 6299 5642 1837 201 214 28 chr15 17697757 17698359 -83682162 + L1 LINE L1 3884 4597 -1549 28 29 0 0 chr15 17698997 17699032 -83681489 + AT_rich Low_complexity Low_complexity 1 35 0 200 158 105 0 chr15 17699085 17699161 -83681360 + (CATTT)n Simple_repeat Simple_repeat 5 88 0 561 123 81 6 chr15 17699182 17699497 -83681024 + (CATTT)n Simple_repeat Simple_repeat 1 338 0 43182 37 24 1 chr15 17699509 17705527 -83674994 - L1PA2 LINE L1 0 6155 3 561 106 66 31 chr15 17705539 17705770 -83674751 + (CATTT)n Simple_repeat Simple_repeat 1 239 0 878 110 36 17 chr15 17705774 17706060 -83674461 + (CATCT)n Simple_repeat Simple_repeat 1 291 0 768 101 65 8 chr15 17706084 17706477 -83674044 + (CATTT)n Simple_repeat Simple_repeat 1 415 0 198 121 103 0 chr15 17706489 17706547 -83673974 + (CATTT)n Simple_repeat Simple_repeat 5 68 0 560 135 47 29 chr15 17706585 17706755 -83673766 + (CATCT)n Simple_repeat Simple_repeat 5 177 0 * 649 78 56 56 chr15 17706728 17706908 -83673613 + (CATTT)n Simple_repeat Simple_repeat 1 180 0 638 112 87 0 chr15 17706915 17707076 -83673445 + (CATCT)n Simple_repeat Simple_repeat 5 179 0 578 97 91 12 chr15 17707075 17707240 -83673281 + (CATTT)n Simple_repeat Simple_repeat 1 178 0 * 283 136 68 0 chr15 17707244 17707303 -83673218 + (CATCT)n Simple_repeat Simple_repeat 5 67 0 531 97 103 7 chr15 17707303 17707458 -83673063 + (CATTT)n Simple_repeat Simple_repeat 5 174 0 844 98 61 0 chr15 17707474 17707637 -83672884 + (CATCT)n Simple_repeat Simple_repeat 5 177 0 553 113 94 12 chr15 17707658 17707818 -83672703 + (CATTT)n Simple_repeat Simple_repeat 2 174 0 600 97 73 24 chr15 17707829 17707994 -83672527 + (CATTT)n Simple_repeat Simple_repeat 5 177 0 218 87 43 72 chr15 17708040 17708109 -83672412 + (CATCT)n Simple_repeat Simple_repeat 1 67 0 36 33 0 16 chr15 17708233 17708257 -83672264 + AT_rich Low_complexity Low_complexity 1 24 -36 754 189 23 30 chr15 17708257 17708271 -83672250 - FLAM_C SINE Alu -171 131 118 1513 189 50 13 chr15 17708271 17708572 -83671949 - AluJo SINE Alu 0 312 1 198 0 0 0 chr15 17708572 17708594 -83671927 + (TTTA)n Simple_repeat Simple_repeat 1 22 0 754 189 23 30 chr15 17708594 17708710 -83671811 - FLAM_C SINE Alu -182 120 1 36 33 0 16 chr15 17708710 17708746 -83671775 + AT_rich Low_complexity Low_complexity 24 60 0 330 280 46 29 chr15 17709136 17709367 -83671154 + (CTAGGG)n Simple_repeat Simple_repeat 1 234 0 261 141 0 78 chr15 17709284 17709475 -83671046 + (CAGGG)n Simple_repeat Simple_repeat 1 176 0 * 219 177 0 99 chr15 17709593 17709880 -83670641 + (CAGGG)n Simple_repeat Simple_repeat 1 258 0 340 171 0 55 chr15 17709907 17710071 -83670450 + (CAGGG)n Simple_repeat Simple_repeat 2 156 0 361 178 2 76 chr15 17710204 17710783 -83669738 + (CAGGG)n Simple_repeat Simple_repeat 1 535 0 205 141 0 90 chr15 17710790 17710868 -83669653 + (CCCTG)n Simple_repeat Simple_repeat 1 71 0 814 126 0 17 chr15 17710922 17711041 -83669480 - AluJb SINE Alu -179 133 17 365 223 32 11 chr15 17711043 17711137 -83669384 + MIR SINE MIR 92 187 -75 335 293 48 0 chr15 17711346 17711493 -83669028 + (CCCTAG)n Simple_repeat Simple_repeat 6 159 0 284 265 61 7 chr15 17711705 17711852 -83668669 + (CTAGGG)n Simple_repeat Simple_repeat 6 160 0 203 174 0 47 chr15 17711856 17711942 -83668579 + (CAGGG)n Simple_repeat Simple_repeat 5 86 0 444 275 47 0 chr15 17711953 17712124 -83668397 + (CTAGGG)n Simple_repeat Simple_repeat 2 180 0 296 293 51 9 chr15 17712137 17712439 -83668082 + (CTAGGG)n Simple_repeat Simple_repeat 1 314 0 431 250 34 23 chr15 17712501 17712677 -83667844 + (CTAGGG)n Simple_repeat Simple_repeat 1 178 0 244 152 0 79 chr15 17712678 17712842 -83667679 + (CAGGG)n Simple_repeat Simple_repeat 1 151 0 307 302 28 28 chr15 17712858 17713037 -83667484 + (CTAGGG)n Simple_repeat Simple_repeat 2 180 0 189 143 7 79 chr15 17713086 17713226 -83667295 + (CAGGG)n Simple_repeat Simple_repeat 2 131 0 473 259 46 9 chr15 17713329 17713667 -83666854 + (CTAGGG)n Simple_repeat Simple_repeat 1 350 0 203 130 0 22 chr15 17713685 17713731 -83666790 + (CAGGG)n Simple_repeat Simple_repeat 3 47 0 213 156 0 74 chr15 17713814 17713949 -83666572 + (CAGGG)n Simple_repeat Simple_repeat 1 125 0 415 260 48 0 chr15 17714005 17714151 -83666370 + (CTAGGG)n Simple_repeat Simple_repeat 2 154 0 359 286 48 0 chr15 17714270 17714438 -83666083 + (CTAGGG)n Simple_repeat Simple_repeat 2 177 0 209 238 16 76 chr15 17714389 17714574 -83665947 + (CAAGG)n Simple_repeat Simple_repeat 2 175 0 * 336 198 6 72 chr15 17714522 17714689 -83665832 + (CAGGG)n Simple_repeat Simple_repeat 1 156 0 236 183 0 59 chr15 17714768 17714937 -83665584 + (CAGGG)n Simple_repeat Simple_repeat 2 160 0 780 284 104 30 chr15 17715761 17716113 -83664408 - HSREP522 Satellite telomeric -171 377 1 3935 217 60 36 chr15 17716244 17717466 -83663055 + L1MB7 LINE L1 2785 4035 -2111 597 96 0 0 chr15 17717470 17717553 -83662968 + AluJb SINE Alu 208 290 -22 1026 152 0 24 chr15 17717584 17717748 -83662773 + AluJo SINE Alu 6 165 -147 2489 187 36 13 chr15 17717748 17718300 -83662221 + L1MB7 LINE L1 5599 6163 -21 22 35 0 0 chr15 17718486 17718515 -83662006 + AT_rich Low_complexity Low_complexity 1 29 0 618 197 0 47 chr15 17718515 17718642 -83661879 + FLAM_A SINE Alu 1 121 -12 2241 131 0 3 chr15 17718651 17718957 -83661564 + AluSx SINE Alu 1 305 -7 348 186 17 0 chr15 17718957 17719016 -83661505 - L1MC4 LINE L1 -1340 6702 6643 1643 162 45 17 chr15 17719163 17719453 -83661068 + AluSx SINE Alu 1 298 -14 2213 136 0 3 chr15 17719453 17719762 -83660759 + AluSx SINE Alu 1 308 -4 1424 181 33 49 chr15 17720014 17720318 -83660203 - AluJo SINE Alu -13 299 1 324 342 8 17 chr15 17720510 17720627 -83659894 - L2 LINE L2 0 3272 3157 186 118 0 0 chr15 17721184 17721218 -83659303 + (CA)n Simple_repeat Simple_repeat 2 35 0 2395 61 14 0 chr15 17722105 17722398 -83658123 - AluY SINE Alu -14 297 1 216 374 20 31 chr15 17722506 17722701 -83657820 + MIR SINE MIR 12 204 -58 2460 127 90 19 chr15 17722704 17723191 -83657330 - Tigger3(Golem) DNA MER2_type -3 3026 2505 2259 121 0 9 chr15 17723191 17723506 -83657015 + AluSq SINE Alu 2 313 0 505 321 24 6 chr15 17723865 17724033 -83656488 + MIR SINE MIR 13 183 -79 622 272 75 55 chr15 17724155 17724409 -83656112 + MER46C DNA MER2_type 80 338 0 2119 139 0 3 chr15 17724697 17724998 -83655523 + AluSx SINE Alu 1 300 -12 2001 163 0 0 chr15 17725682 17725977 -83654544 + AluSx SINE Alu 1 295 -17 189 0 0 0 chr15 17726023 17726044 -83654477 + (CAA)n Simple_repeat Simple_repeat 1 21 0 1562 165 32 36 chr15 17727483 17727620 -83652901 + AluJo SINE Alu 1 137 -175 2227 130 3 0 chr15 17727620 17727921 -83652600 + AluSx SINE Alu 1 302 -10 1562 165 32 36 chr15 17727921 17728062 -83652459 + AluJo SINE Alu 137 278 -34 367 180 33 16 chr15 17728062 17728184 -83652337 + GA-rich Low_complexity Low_complexity 4 127 0 456 125 0 14 chr15 17728184 17728256 -83652265 + AluS SINE Alu 3 73 -239 2186 134 3 0 chr15 17728467 17728772 -83651749 + AluSq SINE Alu 1 306 -7 811 243 0 0 chr15 17728814 17728987 -83651534 + FRAM SINE Alu 1 167 -9 186 333 42 25 chr15 17729022 17729142 -83651379 - MIR SINE MIR -57 151 30 1793 169 55 19 chr15 17729986 17730348 -83650173 + THE1C LTR MaLR 1 375 0 1541 134 0 0 chr15 17730921 17731138 -83649383 + AluSg/x SINE Alu 87 303 -9 479 255 88 8 chr15 17732073 17732238 -83648283 - MIR SINE MIR -56 206 32 1858 142 4 4 chr15 17732630 17732904 -83647617 + AluJb SINE Alu 1 274 -38 399 255 172 14 chr15 17733456 17733601 -83646920 - MER5B DNA MER1_type -7 171 4 213 39 0 0 chr15 17733624 17733650 -83646871 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 1605 142 3 20 chr15 17733659 17733954 -83646567 - TAR1 Satellite telomeric -297 1814 1525 377 321 129 47 chr15 17734337 17735003 -83645518 - L1MEd LINE L1 -5353 766 46 318 181 86 9 chr15 17735516 17735621 -83644900 + MIR3 SINE MIR 81 193 -15 1118 209 108 0 chr15 17736407 17736656 -83643865 + MER68 LTR ERV1 287 562 0 2805 251 74 48 chr15 17736658 17736789 -83643732 - L1 LINE L1 -1208 4938 4812 2238 92 0 74 chr15 17736789 17737115 -83643406 - AluY SINE Alu -9 302 1 2805 251 74 48 chr15 17737115 17737197 -83643324 - L1 LINE L1 -1334 4812 4734 2127 147 0 3 chr15 17737197 17737509 -83643012 - AluSq SINE Alu -2 311 1 2805 251 74 48 chr15 17737509 17737916 -83642605 - L1 LINE L1 -1412 4734 4339 1926 166 3 3 chr15 17737916 17738218 -83642303 + AluJb SINE Alu 1 302 -10 2805 251 74 48 chr15 17738218 17738760 -83641761 - L1 LINE L1 -1807 4339 3744 827 182 107 0 chr15 17738813 17738836 -83641685 - FRAM SINE Alu -139 173 154 255 31 0 0 chr15 17738836 17738868 -83641653 + (TA)n Simple_repeat Simple_repeat 2 33 0 186 103 0 0 chr15 17738867 17738896 -83641625 + (TTTTA)n Simple_repeat Simple_repeat 2 30 0 * 827 182 107 0 chr15 17738868 17739031 -83641490 - FRAM SINE Alu -158 154 1 27 49 0 0 chr15 17739046 17739087 -83641434 + AT_rich Low_complexity Low_complexity 1 41 0 2148 119 36 10 chr15 17739116 17739418 -83641103 - AluSx SINE Alu -2 310 1 2081 133 23 0 chr15 17740178 17740479 -83640042 + AluSx SINE Alu 1 308 -4 2050 130 0 14 chr15 17740966 17741258 -83639263 - AluSx SINE Alu -12 300 13 983 161 0 25 chr15 17741358 17741519 -83639002 + FRAM SINE Alu 3 159 -17 2596 74 0 0 chr15 17741522 17741833 -83638688 + AluY SINE Alu 1 311 0 2572 53 0 3 chr15 17742232 17742532 -83637989 + AluY SINE Alu 1 299 -12 2088 93 21 11 chr15 17742756 17743073 -83637448 - AluSq SINE Alu 0 320 1 1798 137 0 0 chr15 17743206 17743461 -83637060 - AluSq SINE Alu -1 312 58 1031 162 7 0 chr15 17743865 17744019 -83636502 + AluJo SINE Alu 84 238 -74 1805 159 50 0 chr15 17744052 17744329 -83636192 + AluJb SINE Alu 1 291 -21 234 0 0 0 chr15 17744606 17744632 -83635889 + (T)n Simple_repeat Simple_repeat 1 26 0 1726 121 9 0 chr15 17744801 17745032 -83635489 - AluSg/x SINE Alu -12 300 68 1949 123 0 0 chr15 17745302 17745563 -83634958 + AluSq SINE Alu 1 261 -52 28 71 0 0 chr15 17745564 17745620 -83634901 + AT_rich Low_complexity Low_complexity 1 56 0 27 49 0 0 chr15 17745676 17745717 -83634804 + AT_rich Low_complexity Low_complexity 1 41 0 520 112 0 82 chr15 17745733 17745831 -83634690 - L1MB3 LINE L1 -41 6142 6053 1849 178 0 7 chr15 17745847 17746145 -83634376 + AluJo SINE Alu 1 296 -16 624 176 8 16 chr15 17746170 17746295 -83634226 - FLAM_A SINE Alu -9 124 1 2055 194 18 41 chr15 17746296 17746785 -83633736 - L1MB3 LINE L1 -118 6065 5588 1898 148 65 0 chr15 17746812 17747102 -83633419 - AluSx SINE Alu -3 309 1 364 214 8 87 chr15 17748178 17748275 -83632246 - MER96B DNA MER1_type? -34 383 297 2221 124 10 0 chr15 17748275 17748582 -83631939 + AluSx SINE Alu 1 310 -2 364 214 8 87 chr15 17748582 17748610 -83631911 - MER96B DNA MER1_type? -120 297 268 282 29 0 0 chr15 17748611 17748646 -83631875 + (TTTAA)n Simple_repeat Simple_repeat 3 37 0 1502 157 19 38 chr15 17748655 17748916 -83631605 - AluJo SINE Alu -56 256 1 804 296 39 0 chr15 17748959 17749189 -83631332 + MIR SINE MIR 13 251 -11 203 322 34 62 chr15 17749211 17749357 -83631164 - L2 LINE L2 -114 3158 3017 2333 96 0 0 chr15 17749672 17749963 -83630558 + AluSg SINE Alu 3 293 -17 1850 152 4 11 chr15 17750013 17750290 -83630231 + AluJo SINE Alu 1 275 -37 286 106 43 0 chr15 17750291 17750338 -83630183 + Alu SINE Alu 247 295 -7 384 205 68 8 chr15 17751059 17751176 -83629345 + L2 LINE L2 2360 2483 -831 671 155 0 14 chr15 17751184 17751326 -83629195 + C-rich Low_complexity Low_complexity 1 140 0 710 120 4 58 chr15 17751444 17751711 -83628810 + (TCCCC)n Simple_repeat Simple_repeat 1 252 0 186 250 0 0 chr15 17751735 17751791 -83628730 + CT-rich Low_complexity Low_complexity 1 56 0 1681 178 16 16 chr15 17751823 17752132 -83628389 - AluJo SINE Alu -3 309 1 721 151 0 0 chr15 17752147 17752266 -83628255 - FLAM_C SINE Alu -19 124 6 305 236 146 0 chr15 17752270 17752380 -83628141 + L2 LINE L2 2468 2593 -721 480 214 43 0 chr15 17752406 17752523 -83627998 - MIR SINE MIR -65 197 76 617 253 205 44 chr15 17752555 17752836 -83627685 + L2 LINE L2 2709 2944 -369 2284 108 10 0 chr15 17752836 17753133 -83627388 + AluSx SINE Alu 1 300 -12 617 253 205 44 chr15 17753133 17753373 -83627148 + L2 LINE L2 2944 3308 -5 1499 224 0 10 chr15 17753424 17753737 -83626784 + AluJo SINE Alu 1 310 -2 2355 166 110 25 chr15 17753757 17754276 -83626245 - LTR6A LTR ERV1 0 564 2 1310 113 62 5 chr15 17754748 17754943 -83625578 - AluSg/x SINE Alu -15 295 90 2260 96 0 10 chr15 17755377 17755689 -83624832 - AluSg SINE Alu 0 310 1 2577 68 7 0 chr15 17756029 17756338 -83624183 - AluY SINE Alu 0 311 1 2267 119 3 3 chr15 17756386 17756698 -83623823 - AluSx SINE Alu 0 312 1 1818 146 26 42 chr15 17757658 17757966 -83622555 + AluSx SINE Alu 1 303 -9 1166 128 0 0 chr15 17758390 17758546 -83621975 + FRAM SINE Alu 11 166 -10 337 113 0 0 chr15 17759048 17759101 -83621420 - MADE1 DNA Mariner 0 80 28 2027 133 0 23 chr15 17759101 17759402 -83621119 + AluSx SINE Alu 1 294 -18 1096 136 28 11 chr15 17759402 17759578 -83620943 + AluSq SINE Alu 134 312 -1 1674 167 3 37 chr15 17760103 17760290 -83620231 - AluJb SINE Alu 0 312 139 2272 90 3 0 chr15 17760290 17760591 -83619930 - AluSp SINE Alu -11 302 1 1674 167 3 37 chr15 17760591 17760726 -83619795 - AluJb SINE Alu -173 139 1 2049 97 47 3 chr15 17760827 17761127 -83619394 - AluSq SINE Alu 0 313 1 687 171 0 17 chr15 17761423 17761540 -83618981 + FLAM_C SINE Alu 3 117 -16 1864 122 0 78 chr15 17761549 17761740 -83618781 - AluSx SINE Alu -10 302 144 2018 109 3 0 chr15 17761740 17762024 -83618497 - AluSg1 SINE Alu -24 285 1 1864 122 0 78 chr15 17762024 17762153 -83618368 - AluSx SINE Alu -168 144 7 756 158 0 43 chr15 17762178 17762317 -83618204 - FLAM_C SINE Alu 0 133 1 2069 117 17 0 chr15 17762499 17762789 -83617732 - AluSq SINE Alu -18 295 1 2091 128 0 0 chr15 17763177 17763489 -83617032 - AluSx SINE Alu 0 312 1 836 191 25 0 chr15 17763516 17763678 -83616843 + AluJb SINE Alu 137 302 -10 530 243 91 100 chr15 17763711 17763812 -83616709 - L1M4 LINE L1 -1665 5502 5402 1869 154 0 13 chr15 17763812 17764124 -83616397 - AluSx SINE Alu -4 308 1 530 243 91 100 chr15 17764124 17764351 -83616170 - L1M4 LINE L1 -1765 5402 5177 1152 165 5 9 chr15 17764516 17764728 -83615793 + AluJb SINE Alu 92 302 -10 513 177 0 0 chr15 17764913 17764992 -83615529 - AluJ/FLAM SINE Alu -221 91 13 1945 155 0 0 chr15 17765084 17765381 -83615140 + AluSq SINE Alu 5 301 -12 1155 145 199 12 chr15 17765387 17765628 -83614893 + AluSg1 SINE Alu 1 286 -23 993 80 0 15 chr15 17766034 17766171 -83614350 + AluSq/x SINE Alu 1 135 -178 2013 140 0 0 chr15 17766171 17766471 -83614050 + AluSx SINE Alu 1 300 -12 196 293 17 0 chr15 17766497 17766555 -83613966 - MIR3 SINE MIR -135 73 15 713 205 8 0 chr15 17767301 17767423 -83613098 - FLAM_A SINE Alu -10 123 1 307 73 24 0 chr15 17767482 17767523 -83612998 - 5S rRNA rRNA -79 42 1 1680 177 0 10 chr15 17767569 17767868 -83612653 + AluJb SINE Alu 3 298 -14 2093 118 0 3 chr15 17767868 17768164 -83612357 + AluSg SINE Alu 1 295 -15 2053 102 40 7 chr15 17768468 17768771 -83611750 + AluSq SINE Alu 1 313 0 1670 169 3 13 chr15 17768785 17769093 -83611428 + AluJo SINE Alu 1 305 -7 492 262 16 27 chr15 17769205 17769293 -83611228 - L1M4 LINE L1 -2383 4784 4697 396 0 0 0 chr15 17769293 17769337 -83611184 + (TG)n Simple_repeat Simple_repeat 2 45 0 492 262 16 27 chr15 17769337 17769431 -83611090 - L1M4 LINE L1 -2470 4697 4604 2231 218 15 17 chr15 17769473 17769941 -83610580 - L1M4 LINE L1 -5941 1227 761 1169 206 86 86 chr15 17770003 17770435 -83610086 + MSTB1 LTR MaLR 1 432 0 1347 221 246 10 chr15 17770444 17770927 -83609594 - L1M4 LINE L1 -6571 597 1 649 269 187 26 chr15 17771050 17771440 -83609081 - L1ME3A LINE L1 -1 6169 5717 314 198 0 74 chr15 17771610 17771691 -83608830 - L1ME3A LINE L1 -2241 5544 5470 379 303 61 6 chr15 17771712 17771877 -83608644 - L1MEd LINE L1 -5943 176 3 1351 95 37 0 chr15 17772194 17772384 -83608137 + AluY SINE Alu 106 302 -9 2175 103 3 0 chr15 17772592 17772882 -83607639 + AluSx SINE Alu 1 291 -21 1155 193 82 4 chr15 17773098 17773368 -83607153 - L1ME3A LINE L1 -769 5377 5087 309 266 16 57 chr15 17773819 17773943 -83606578 + Charlie1 DNA MER1_type 1 119 -2642 432 195 57 24 chr15 17774053 17774176 -83606345 + Charlie1 DNA MER1_type 2523 2649 -112 275 294 84 0 chr15 17774206 17774325 -83606196 - L1MA9 LINE L1 -5 6307 6179 979 161 134 28 chr15 17774886 17775140 -83605381 + AluJo SINE Alu 1 281 -31 857 199 61 30 chr15 17775151 17775259 -83605262 - Charlie5 DNA MER1_type -119 2505 2402 2179 105 0 7 chr15 17775259 17775565 -83604956 - AluSq SINE Alu -9 304 1 857 199 61 30 chr15 17775565 17775687 -83604834 - Charlie5 DNA MER1_type -222 2402 2268 477 164 103 0 chr15 17775706 17775822 -83604699 - MER3 DNA MER1_type -41 168 41 232 278 142 57 chr15 17775825 17776294 -83604227 - L2 LINE L2 -208 3064 2554 193 312 18 46 chr15 17776365 17776474 -83604047 - L2 LINE L2 -987 2327 2222 735 107 116 16 chr15 17776554 17776675 -83603846 - FLAM_C SINE Alu 0 133 1 499 280 63 7 chr15 17776935 17777078 -83603443 + MIR SINE MIR 42 192 -70 4958 128 85 15 chr15 17777082 17777141 -83603380 - Tigger2 DNA MER2_type 0 2718 2665 2120 106 14 0 chr15 17777141 17777433 -83603088 + AluSg SINE Alu 1 296 -14 4958 128 85 15 chr15 17777433 17778219 -83602302 - Tigger2 DNA MER2_type -53 2665 1814 1587 185 58 48 chr15 17778196 17778552 -83601969 + MER49 LTR ERV1 515 866 -57 * 1879 148 0 16 chr15 17778552 17778857 -83601664 + AluSx SINE Alu 6 305 -7 1478 162 8 15 chr15 17778867 17779126 -83601395 + AluJo SINE Alu 1 257 -55 1587 185 58 48 chr15 17779126 17779153 -83601368 + MER49 LTR ERV1 874 913 -10 672 125 0 0 chr15 17779179 17779283 -83601238 - Tigger2 DNA MER2_type -1742 976 873 786 204 40 28 chr15 17779298 17779474 -83601047 - AluJb SINE Alu -1 311 134 4316 126 64 29 chr15 17779474 17780239 -83600282 - Tigger2 DNA MER2_type -1833 885 94 505 175 0 0 chr15 17780252 17780332 -83600189 - AluJ/FLAM SINE Alu -229 83 4 445 158 13 0 chr15 17780335 17780411 -83600110 - Tigger2 DNA MER2_type -1831 887 811 721 161 0 9 chr15 17780465 17780577 -83599944 + FLAM_C SINE Alu 3 113 -30 1972 125 0 29 chr15 17780582 17780893 -83599628 - AluSc SINE Alu -7 302 1 363 181 0 42 chr15 17780935 17781007 -83599514 - Tigger2 DNA MER2_type -2649 69 1 957 236 71 13 chr15 17781148 17781968 -83598553 - L1ME1 LINE L1 -142 6024 5032 2983 167 70 2 chr15 17781997 17782541 -83597980 - ERVL LTR ERVL -357 5407 4827 803 142 0 0 chr15 17782541 17782654 -83597867 - AluSq/x SINE Alu -199 114 2 8338 247 61 32 chr15 17782677 17785102 -83595419 - L1MC/D LINE L1 -743 5797 3445 1658 153 28 17 chr15 17785102 17785390 -83595131 - AluJb SINE Alu -21 291 1 8338 247 61 32 chr15 17785390 17786052 -83594469 - L1MC/D LINE L1 -3095 3445 2687 2778 13 0 0 chr15 17786052 17786363 -83594158 - AluY SINE Alu 0 311 1 8338 247 61 32 chr15 17786363 17786485 -83594036 - L1MC/D LINE L1 -3853 2687 2570 1026 256 120 50 chr15 17786560 17787075 -83593446 - MER77 LTR ERV1 -1 604 54 3114 245 94 17 chr15 17787106 17788342 -83592179 - L1MDb LINE L1 -4012 2528 1106 1491 180 3 49 chr15 17788342 17788669 -83591852 - AluJo SINE Alu 0 312 1 3114 245 94 17 chr15 17788669 17788946 -83591575 - L1MDb LINE L1 -5434 1106 852 731 276 62 23 chr15 17789117 17789374 -83591147 - L1MDb LINE L1 -6212 328 62 476 317 100 42 chr15 17790521 17790830 -83589691 + HAL1 LINE L1 1246 1572 -935 873 127 8 0 chr15 17791165 17791299 -83589222 + AluSq/x SINE Alu 1 135 -177 2035 118 0 0 chr15 17791299 17791595 -83588926 + AluSx SINE Alu 1 296 -16 700 184 45 11 chr15 17791739 17791924 -83588597 - L1M3 LINE L1 -661 5510 5288 182 216 0 0 chr15 17792003 17792040 -83588481 + L2 LINE L2 3261 3297 -16 749 260 27 14 chr15 17794152 17794379 -83586142 + LTR33 LTR ERVL 35 252 -271 348 288 15 15 chr15 17794431 17794563 -83585958 + LTR33 LTR ERVL 382 513 -8 259 247 55 0 chr15 17795106 17795179 -83585342 - MIR3 SINE MIR -5 203 127 1986 150 3 35 chr15 17796235 17796423 -83584098 + L1M3 LINE L1 5442 5616 -555 2380 108 93 18 chr15 17796423 17796821 -83583700 + MSTA LTR MaLR 1 428 0 1986 150 3 35 chr15 17796821 17796978 -83583543 + L1M3 LINE L1 5616 5776 -395 371 286 86 36 chr15 17798364 17798504 -83582017 + L2 LINE L2 3166 3312 -1 243 359 60 0 chr15 17798511 17798628 -83581893 + MIR SINE MIR 34 157 -105 258 32 0 0 chr15 17798665 17798696 -83581825 + (TG)n Simple_repeat Simple_repeat 2 32 0 * 261 98 0 0 chr15 17798695 17798736 -83581785 + (TA)n Simple_repeat Simple_repeat 2 42 0 183 352 93 19 chr15 17798751 17798859 -83581662 + L2 LINE L2 3095 3210 -62 15093 80 10 1 chr15 17800960 17803745 -83576776 - L1PA7 LINE L1 -4 6150 3338 15726 116 13 22 chr15 17803853 17806323 -83574198 - L1PA7 LINE L1 -3076 3070 625 841 271 127 16 chr15 17806868 17807288 -83573233 + L2 LINE L2 2530 3052 -261 224 167 0 0 chr15 17807391 17807433 -83573088 + L2 LINE L2 3231 3272 0 25 0 0 0 chr15 17807707 17807732 -83572789 + AT_rich Low_complexity Low_complexity 1 25 0 1687 243 92 27 chr15 17807827 17808308 -83572213 + LTR33 LTR ERVL 4 515 -6 2152 105 7 0 chr15 17808314 17808610 -83571911 - AluSg SINE Alu -12 298 1 8048 60 6 91 chr15 17809224 17810485 -83570036 - SVA Other Other -7 1379 226 290 302 78 8 chr15 17810790 17810919 -83569602 + MIR SINE MIR 51 188 -74 1916 178 79 5 chr15 17810929 17811323 -83569198 + L1MC2 LINE L1 5917 6339 -5 30 45 0 0 chr15 17811345 17811389 -83569132 + AT_rich Low_complexity Low_complexity 1 44 0 475 294 20 7 chr15 17812342 17812495 -83568026 - MER103 DNA DNA 0 166 12 2317 112 3 0 chr15 17812579 17812882 -83567639 + AluSx SINE Alu 1 304 -8 28 0 0 0 chr15 17813013 17813041 -83567480 + AT_rich Low_complexity Low_complexity 1 28 0 375 0 0 0 chr15 17813319 17813362 -83567159 - MADE1 DNA Mariner 0 80 38 333 23 23 0 chr15 17814166 17814209 -83566312 + MADE1 DNA Mariner 37 80 0 380 313 37 82 chr15 17814302 17814494 -83566027 + MIR SINE MIR 6 184 -78 1590 167 36 4 chr15 17814494 17814617 -83565904 + AluJb SINE Alu 1 119 -193 360 0 0 0 chr15 17814617 17814657 -83565864 + (CA)n Simple_repeat Simple_repeat 2 41 0 1590 167 36 4 chr15 17814657 17814809 -83565712 + AluJb SINE Alu 119 285 -27 380 313 37 82 chr15 17814809 17814884 -83565637 + MIR SINE MIR 184 261 -1 200 307 157 30 chr15 17817380 17817839 -83562682 + L2 LINE L2 2118 2634 -680 863 186 56 0 chr15 17818088 17818249 -83562272 - FAM SINE Alu -5 170 1 347 319 50 0 chr15 17818251 17818370 -83562151 + L2 LINE L2 3125 3249 -23 219 36 0 0 chr15 17818903 17818931 -83561590 + (A)n Simple_repeat Simple_repeat 1 28 0 1848 176 38 61 chr15 17818992 17819469 -83561052 - MLT1C LTR MaLR -1 466 1 811 189 34 34 chr15 17820132 17820307 -83560214 + FAM SINE Alu 1 175 0 22 35 0 0 chr15 17820307 17820336 -83560185 + AT_rich Low_complexity Low_complexity 1 29 0 1744 172 40 3 chr15 17820378 17820675 -83559846 + AluJo SINE Alu 1 308 -4 541 194 191 53 chr15 17820798 17820998 -83559523 - L1ME4a LINE L1 -4 6117 5946 1834 141 27 13 chr15 17820998 17821296 -83559225 - AluJb SINE Alu -10 302 1 541 194 191 53 chr15 17821296 17821450 -83559071 - L1ME4a LINE L1 -175 5946 5714 361 203 0 0 chr15 17821700 17821769 -83558752 + AluJ/FLAM SINE Alu 1 69 -233 231 186 0 0 chr15 17821807 17821850 -83558671 + G-rich Low_complexity Low_complexity 5 47 0 834 175 111 11 chr15 17821853 17822042 -83558479 + MER50 LTR ERV1 33 240 -494 * 1855 126 11 7 chr15 17822025 17822303 -83558218 + MER50 LTR ERV1 433 711 -23 292 254 0 0 chr15 17822307 17822362 -83558159 + FLAM SINE Alu 71 125 -8 186 328 107 8 chr15 17822619 17822750 -83557771 + MIR SINE MIR 3 146 -116 188 287 210 19 chr15 17822782 17822939 -83557582 - MIR SINE MIR -54 208 22 928 193 49 34 chr15 17823087 17823352 -83557169 - MER96B DNA MER1_type? 0 417 149 2296 72 31 7 chr15 17823383 17823676 -83556845 + AluY SINE Alu 1 300 -11 21 0 0 0 chr15 17823795 17823816 -83556705 + AT_rich Low_complexity Low_complexity 1 21 0 2119 88 56 7 chr15 17823871 17824155 -83556366 - AluSq SINE Alu -15 298 1 2188 120 7 0 chr15 17825353 17825661 -83554860 + AluSg SINE Alu 1 310 0 2294 104 0 0 chr15 17825721 17826019 -83554502 + AluSc SINE Alu 1 298 -11 662 137 24 0 chr15 17826068 17826192 -83554329 + L1MB3 LINE L1 6041 6167 -16 21 36 0 0 chr15 17826236 17826264 -83554257 + AT_rich Low_complexity Low_complexity 1 28 0 2144 118 10 7 chr15 17826429 17826726 -83553795 - AluSx SINE Alu -14 298 1 1407 202 65 110 chr15 17826739 17827250 -83553271 + MER20B DNA MER1_type 64 551 -232 21 0 0 0 chr15 17827250 17827271 -83553250 + AT_rich Low_complexity Low_complexity 1 21 0 2396 88 0 0 chr15 17828116 17828410 -83552111 + AluSg1 SINE Alu 2 295 -14 466 248 61 43 chr15 17828524 17828688 -83551833 + L1ME4a LINE L1 5696 5876 -245 1963 159 10 0 chr15 17828688 17828990 -83551531 + AluJb SINE Alu 2 306 -6 466 248 61 43 chr15 17828990 17829117 -83551404 + L1ME4a LINE L1 5876 5999 -122 268 338 81 5 chr15 17829560 17829917 -83550604 + L2 LINE L2 2593 2981 -291 2866 69 11 16 chr15 17829919 17830296 -83550225 + THE1C LTR MaLR 1 375 0 359 326 62 17 chr15 17830443 17830621 -83549900 + MIR SINE MIR 25 210 -52 238 274 20 78 chr15 17830749 17830851 -83549670 + L2 LINE L2 2992 3087 -185 312 299 47 19 chr15 17831082 17831189 -83549332 + L2 LINE L2 3163 3272 0 487 287 91 35 chr15 17831800 17832237 -83548284 + LTR33 LTR ERVL 23 521 0 655 221 23 0 chr15 17832265 17832396 -83548125 + MER94 DNA DNA 1 134 0 2047 134 7 0 chr15 17834831 17835122 -83545399 + AluSx SINE Alu 1 293 -19 731 161 0 0 chr15 17835197 17835315 -83545206 - FLAM_A SINE Alu -15 127 10 468 86 0 0 chr15 17835342 17835412 -83545109 - Alu SINE Alu 0 312 243 1386 82 66 6 chr15 17835524 17835706 -83544815 - AluY SINE Alu -118 193 1 928 156 0 19 chr15 17835841 17835995 -83544526 + AluJb SINE Alu 140 290 -22 225 154 77 0 chr15 17836003 17836068 -83544453 + GA-rich Low_complexity Low_complexity 1 70 0 466 60 0 0 chr15 17836248 17836315 -83544206 - Alu SINE Alu 0 310 244 754 147 16 0 chr15 17836315 17836444 -83544077 - L1MB3 LINE L1 -41 6142 6012 2035 141 3 0 chr15 17836679 17836993 -83543528 + AluSx SINE Alu 1 315 0 316 296 44 0 chr15 17837533 17837649 -83542872 - MIR SINE MIR -53 155 34 38 39 0 0 chr15 17837820 17837872 -83542649 + AT_rich Low_complexity Low_complexity 1 52 0 2092 141 0 3 chr15 17837878 17838177 -83542344 + AluSq SINE Alu 1 298 -15 612 246 0 0 chr15 17838179 17838301 -83542220 + FLAM_A SINE Alu 1 122 -11 979 188 11 11 chr15 17838335 17838516 -83542005 + AluJo SINE Alu 1 181 -131 1403 117 117 0 chr15 17838517 17838730 -83541791 - AluSx SINE Alu -15 297 60 710 182 0 0 chr15 17838736 17838857 -83541664 + AluJo SINE Alu 190 310 -2 1453 191 57 7 chr15 17838875 17839158 -83541363 + AluJb SINE Alu 1 297 -15 2009 157 0 0 chr15 17839159 17839453 -83541068 - AluSx SINE Alu -18 294 1 2506 68 0 0 chr15 17839461 17839754 -83540767 - AluY SINE Alu -18 293 1 21 0 0 0 chr15 17839761 17839782 -83540739 + AT_rich Low_complexity Low_complexity 1 21 0 284 321 28 0 chr15 17839909 17840018 -83540503 - MIR SINE MIR -139 123 12 2074 126 11 0 chr15 17840338 17840624 -83539897 + AluSg SINE Alu 4 292 -18 1026 116 60 101 chr15 17840626 17840687 -83539834 - L1MB7 LINE L1 -16 6168 6106 1985 127 0 17 chr15 17840687 17840986 -83539535 - AluJo SINE Alu -13 299 6 1026 116 60 101 chr15 17840986 17841192 -83539329 - L1MB7 LINE L1 -78 6106 5912 409 304 192 14 chr15 17841196 17841680 -83538841 + L2 LINE L2 1823 2392 -922 306 166 59 27 chr15 17841686 17841793 -83538728 + AluJ/FLAM SINE Alu 2 86 -216 887 192 11 6 chr15 17841976 17842153 -83538368 + FRAM SINE Alu 1 173 -3 272 297 60 22 chr15 17842202 17842387 -83538134 + L2 LINE L2 2434 2625 -689 379 338 163 12 chr15 17842492 17842915 -83537606 + L2 LINE L2 2827 3313 0 1844 145 28 3 chr15 17843026 17843308 -83537213 - AluSx SINE Alu -23 289 1 1612 168 0 67 chr15 17843588 17843722 -83536799 + AluJo SINE Alu 1 142 -170 2470 83 0 0 chr15 17843722 17844024 -83536497 + AluY SINE Alu 1 302 -9 1612 168 0 67 chr15 17844024 17844204 -83536317 + AluJo SINE Alu 142 294 -18 1559 142 4 0 chr15 17844657 17844882 -83535639 + AluSq SINE Alu 35 260 -53 1714 131 0 46 chr15 17844910 17845046 -83535475 + AluSx SINE Alu 1 121 -191 2176 110 0 10 chr15 17845046 17845347 -83535174 + AluSg SINE Alu 1 298 -12 1714 131 0 46 chr15 17845347 17845470 -83535051 + AluSx SINE Alu 121 248 -64 2103 118 45 0 chr15 17846065 17846353 -83534168 - AluSx SINE Alu -11 301 1 1747 155 7 20 chr15 17846404 17846701 -83533820 + AluJo SINE Alu 17 309 -3 1837 170 7 0 chr15 17846706 17846995 -83533526 + AluJo SINE Alu 1 291 -21 23 0 0 0 chr15 17846995 17847018 -83533503 + AT_rich Low_complexity Low_complexity 1 23 0 2161 131 3 0 chr15 17847061 17847366 -83533155 + AluSx SINE Alu 1 306 -6 1663 160 25 110 chr15 17847382 17847781 -83532740 + MLT1A1 LTR MaLR 1 365 0 1985 124 4 4 chr15 17847981 17848256 -83532265 + AluSg SINE Alu 1 275 -35 1917 116 40 4 chr15 17848549 17848847 -83531674 + AluSq SINE Alu 1 308 0 1193 144 5 21 chr15 17848957 17849145 -83531376 - AluJb SINE Alu -26 286 102 331 276 74 37 chr15 17899252 17899415 -83481106 - L1M4 LINE L1 -938 5208 5040 27 49 0 0 chr15 17899415 17899456 -83481065 + AT_rich Low_complexity Low_complexity 1 41 0 450 264 60 53 chr15 17899657 17899941 -83480580 - L1M4 LINE L1 -1091 5055 4770 21 95 0 0 chr15 17900087 17900150 -83480371 + AT_rich Low_complexity Low_complexity 1 63 0 967 114 29 105 chr15 17900297 17900404 -83480117 + L1PA16 LINE L1 5932 6017 -149 1702 173 0 3 chr15 17900404 17900693 -83479828 + AluJb SINE Alu 1 288 -24 967 114 29 105 chr15 17900693 17900795 -83479726 + L1PA16 LINE L1 6017 6125 -41 917 213 0 0 chr15 17900951 17901151 -83479370 + AluSg/x SINE Alu 116 315 0 1182 134 18 0 chr15 17901386 17901557 -83478964 + AluSq SINE Alu 1 174 -139 1822 178 0 7 chr15 17901940 17902238 -83478283 - AluJo SINE Alu -16 296 1 2294 155 62 56 chr15 17902299 17902801 -83477720 + LTR9 LTR ERV1 1 505 -107 236 71 71 0 chr15 17902808 17902864 -83477657 + CT-rich Low_complexity Low_complexity 2 61 0 200 156 44 0 chr15 17904747 17904792 -83475729 + (CA)n Simple_repeat Simple_repeat 2 48 0 1974 148 10 7 chr15 17905144 17905442 -83475079 + AluSx SINE Alu 1 299 -13 388 175 92 25 chr15 17905448 17905568 -83474953 - L1ME4a LINE L1 -2 6119 5992 186 103 0 0 chr15 17905904 17905933 -83474588 + (CATA)n Simple_repeat Simple_repeat 2 30 0 4460 26 4 4 chr15 17905991 17906521 -83474000 - L1PA4 LINE L1 -10 6145 5616 2987 30 0 0 chr15 17906521 17906994 -83473527 + L1PA4 LINE L1 5137 5609 -546 290 345 73 9 chr15 17907197 17907307 -83473214 - L2 LINE L2 -3 3269 3153 2258 95 0 3 chr15 17907516 17907820 -83472701 - AluY SINE Alu -8 303 1 26 0 0 0 chr15 17910193 17910219 -83470302 + AT_rich Low_complexity Low_complexity 1 26 0 217 226 113 47 chr15 17910549 17910655 -83469866 + MIR SINE MIR 100 212 -50 338 310 129 19 chr15 17910870 17911025 -83469496 + MIR3 SINE MIR 13 184 -24 243 0 0 0 chr15 17911545 17911572 -83468949 + (T)n Simple_repeat Simple_repeat 1 27 0 2274 117 0 0 chr15 17911874 17912182 -83468339 + AluSq SINE Alu 1 308 -5 548 14 14 0 chr15 17912937 17913006 -83467515 + (TA)n Simple_repeat Simple_repeat 1 70 0 22 56 0 0 chr15 17913851 17913887 -83466634 + AT_rich Low_complexity Low_complexity 1 36 0 492 171 12 0 chr15 17913887 17913969 -83466552 + AluJ/FLAM SINE Alu 1 83 -229 1339 176 68 0 chr15 17914069 17914319 -83466202 + AluJo SINE Alu 38 304 -8 288 307 0 0 chr15 17914510 17914598 -83465923 + MIR SINE MIR 175 262 0 2161 112 0 10 chr15 17914679 17914983 -83465538 - AluY SINE Alu -10 301 1 286 260 57 24 chr15 17915020 17915143 -83465378 - L1ME4a LINE L1 -51 6070 5944 1969 119 3 31 chr15 17915310 17915596 -83464925 + AluSq SINE Alu 5 282 -31 180 0 0 0 chr15 17915597 17915617 -83464904 + (TTAA)n Simple_repeat Simple_repeat 1 20 0 691 251 15 41 chr15 17915627 17915896 -83464625 + L1MEd LINE L1 1010 1309 -4862 884 122 0 7 chr15 17916893 17917032 -83463489 - AluSg/x SINE Alu -2 310 173 2656 148 20 2 chr15 17917032 17917526 -83462995 - L1MA4 LINE L1 -287 6018 5498 2110 135 0 3 chr15 17918794 17919105 -83461416 + AluSx SINE Alu 1 310 -2 293 255 117 11 chr15 17919649 17919743 -83460778 + MIR SINE MIR 159 262 0 1494 235 49 4 chr15 17919779 17920055 -83460466 - L1ME4a LINE L1 -465 5701 5389 2188 88 0 3 chr15 17920055 17920340 -83460181 - AluSx SINE Alu -24 288 5 1494 235 49 4 chr15 17920340 17920525 -83459996 - L1ME4a LINE L1 -777 5389 5214 2098 114 0 0 chr15 17921017 17921298 -83459223 + AluSg SINE Alu 7 287 -23 24 0 0 0 chr15 17921301 17921325 -83459196 + AT_rich Low_complexity Low_complexity 1 24 0 2146 102 3 0 chr15 17921537 17921843 -83458678 + AluSx SINE Alu 1 307 0 1907 146 0 29 chr15 17922378 17922694 -83457827 + AluSx SINE Alu 3 309 -3 2180 108 7 0 chr15 17923380 17923667 -83456854 + AluSx SINE Alu 1 289 -23 672 121 0 10 chr15 17924057 17924156 -83456365 - MER4A LTR ERV1 -566 98 1 1006 121 79 11 chr15 17924156 17924346 -83456175 + L1MA3 LINE L1 5705 5907 -398 * 2727 188 86 13 chr15 17924344 17925021 -83455500 - L1 LINE L1 -1446 4700 3975 * 6838 121 28 19 chr15 17925013 17926501 -83454020 - L1PA3 LINE L1 -2 6153 4679 2009 103 0 21 chr15 17926501 17926810 -83453711 - AluSx SINE Alu 0 311 9 6838 121 28 19 chr15 17926810 17927024 -83453497 - L1PA3 LINE L1 -1476 4679 3052 2084 123 6 12 chr15 17927025 17927358 -83453163 - L1PB2 LINE L1 0 7570 7240 2997 199 25 27 chr15 17927358 17928321 -83452200 - L1PB2 LINE L1 -622 6948 5996 3207 213 32 10 chr15 17928342 17929255 -83451266 - L1PB2 LINE L1 -3114 4451 3509 642 365 148 25 chr15 17929258 17929640 -83450881 - LTR28 LTR ERV1 -676 344 1 7622 228 42 8 chr15 17929641 17931265 -83449256 - L1M1 LINE L1 -5870 1695 17 395 191 0 0 chr15 17933123 17933207 -83447314 - L1MA4 LINE L1 -179 6121 6041 620 238 33 0 chr15 17933226 17933377 -83447144 + FRAM SINE Alu 1 156 -20 1581 214 3 0 chr15 17933379 17933682 -83446839 + AluJo SINE Alu 1 304 -8 273 194 16 23 chr15 17933803 17933889 -83446632 + L1MB5 LINE L1 5838 5932 -238 1793 138 25 14 chr15 17933928 17934210 -83446311 + AluSx SINE Alu 3 287 -25 2534 258 58 48 chr15 17934531 17937019 -83443502 - L1M4 LINE L1 -3591 3053 455 268 188 115 10 chr15 17937016 17937112 -83443409 - L1M4 LINE L1 -3081 3065 2960 * 1269 240 14 7 chr15 17937113 17937400 -83443121 - AluJb SINE Alu -23 289 1 295 200 38 135 chr15 17937508 17937693 -83442828 + MER53 DNA DNA 23 189 0 2016 118 14 3 chr15 17938616 17938904 -83441617 + AluSg SINE Alu 1 291 -19 8048 103 32 15 chr15 17938940 17939717 -83440804 - HSMAR1 DNA Mariner 0 1287 483 2195 124 0 0 chr15 17939717 17940024 -83440497 + AluSx SINE Alu 1 307 -5 8048 103 32 15 chr15 17940024 17940417 -83440104 - HSMAR1 DNA Mariner -804 483 98 701 171 0 0 chr15 17940716 17940827 -83439694 - AluJb SINE Alu -201 111 1 786 210 80 34 chr15 17941026 17941057 -83439464 + L1ME3A LINE L1 5889 5917 -253 774 103 0 0 chr15 17941057 17941164 -83439357 - U6 snRNA snRNA 0 107 1 786 210 80 34 chr15 17941164 17941394 -83439127 + L1ME3A LINE L1 5917 6162 -8 262 186 57 14 chr15 17941555 17941625 -83438896 - L1ME3A LINE L1 -3 6167 6095 236 352 47 23 chr15 17941715 17941843 -83438678 + MIR SINE MIR 21 151 -111 405 221 43 80 chr15 17942036 17942199 -83438322 - MIR SINE MIR -16 246 90 1501 186 62 0 chr15 17942234 17942509 -83438012 - AluJb SINE Alu -20 292 1 643 232 47 62 chr15 17943045 17943256 -83437265 - L1ME1 LINE L1 -74 6092 5885 386 236 0 22 chr15 17943256 17943345 -83437176 - AluJo SINE Alu -166 136 50 933 175 55 23 chr15 17943349 17943566 -83436955 - L1ME1 LINE L1 -260 5906 5683 1736 156 43 0 chr15 17943952 17944234 -83436287 - AluJb SINE Alu -14 298 5 7110 258 72 29 chr15 17944247 17948270 -83432251 + L1MD2 LINE L1 1046 5208 -1007 1332 126 0 42 chr15 17948277 17948492 -83432029 + AluSc SINE Alu 1 206 -103 615 190 20 99 chr15 17948592 17948679 -83431842 + L1MD2 LINE L1 5298 5390 -846 1765 121 16 72 chr15 17948679 17948986 -83431535 - AluSx SINE Alu -18 294 5 615 190 20 99 chr15 17948986 17949109 -83431412 + L1MD2 LINE L1 5390 5493 -743 203 331 107 38 chr15 17949120 17949383 -83431138 - L2 LINE L2 -665 2649 2369 372 271 33 46 chr15 17949434 17949674 -83430847 - L1MC5 LINE L1 -179 7782 7546 1078 237 67 3 chr15 17950840 17951140 -83429381 + L1MD2 LINE L1 5973 6291 -137 22 0 0 0 chr15 17951357 17951379 -83429142 + AT_rich Low_complexity Low_complexity 1 22 0 497 125 20 0 chr15 17951747 17951839 -83428682 - L1MD1 LINE L1 0 7995 6146 7582 29 8 0 chr15 17952148 17953522 -83426999 - L1PA4 LINE L1 -1 6154 4776 534 275 0 0 chr15 17954005 17954125 -83426396 - FLAM_C SINE Alu -11 132 13 365 304 5 77 chr15 17954560 17954754 -83425767 + MLT1E2 LTR MaLR 1 180 -446 23 54 0 0 chr15 17956666 17956703 -83423818 + AT_rich Low_complexity Low_complexity 1 37 0 32 26 0 0 chr15 17957492 17957531 -83422990 + AT_rich Low_complexity Low_complexity 1 39 0 3699 211 57 27 chr15 17959059 17960962 -83419559 - L1MA8 LINE L1 -3 6288 4326 5133 136 66 7 chr15 17960984 17961935 -83418586 - L1MA2 LINE L1 0 6304 5298 512 256 175 6 chr15 17962527 17962887 -83417634 + L1MB2 LINE L1 1071 1491 -4822 461 290 96 21 chr15 17962924 17963294 -83417227 + L1MB2 LINE L1 1363 2158 -4225 440 223 100 50 chr15 17963520 17963957 -83416564 + L1MB2 LINE L1 2137 2611 -3771 268 252 158 12 chr15 17964204 17964452 -83416069 + L1MB2 LINE L1 2837 3119 -3263 804 281 30 9 chr15 17964461 17964792 -83415729 + L1MB2 LINE L1 4757 5094 -1288 424 256 170 0 chr15 17964787 17965010 -83415511 + L1MB2 LINE L1 5914 6174 -233 * 2191 94 10 7 chr15 17965036 17965333 -83415188 + AluSx SINE Alu 1 298 -14 802 282 64 88 chr15 17966217 17966841 -83413680 + L1M3 LINE L1 2 610 -5345 2867 238 74 44 chr15 17966884 17967491 -83413030 + L1M3 LINE L1 3978 4565 -1491 2334 98 0 7 chr15 17967491 17967787 -83412734 - AluSg SINE Alu -16 294 1 2867 238 74 44 chr15 17967787 17968520 -83412001 + L1M3 LINE L1 4565 5367 -689 376 183 0 0 chr15 17968529 17968600 -83411921 + L1PB4 LINE L1 6045 6115 -41 2118 87 18 0 chr15 17969207 17969545 -83410976 - AluSc SINE Alu 0 343 1 402 294 114 92 chr15 17970439 17971273 -83409248 + L1M4 LINE L1 445 1296 -5553 1327 181 42 19 chr15 17973286 17973416 -83407105 - L1MA9 LINE L1 -387 5925 5799 261 0 0 0 chr15 17973416 17973445 -83407076 + (TG)n Simple_repeat Simple_repeat 2 30 0 1327 181 42 19 chr15 17973445 17973624 -83406897 - L1MA9 LINE L1 -513 5799 5609 1285 185 39 4 chr15 17973618 17973899 -83406622 + L1MA9 LINE L1 5972 6262 -50 * 286 187 22 112 chr15 17974151 17974285 -83406236 - L1MEc LINE L1 -4258 2138 2017 1656 112 29 105 chr15 17974286 17974627 -83405894 - AluYb8 SINE Alu 0 317 1 432 0 0 0 chr15 17975807 17975855 -83404666 + (CA)n Simple_repeat Simple_repeat 1 48 0 2128 119 7 10 chr15 17976034 17976336 -83404185 + AluSx SINE Alu 1 301 -11 327 138 231 0 chr15 17978465 17978530 -83401991 - MADE1 DNA Mariner 0 80 1 1075 274 18 26 chr15 17979841 17980073 -83400448 + L1M4 LINE L1 3355 3587 -3261 3008 102 13 11 chr15 17980073 17980535 -83399986 - L1PA10 LINE L1 0 6168 5706 1075 274 18 26 chr15 17980535 17980916 -83399605 + L1M4 LINE L1 3587 3963 -2885 348 125 0 0 chr15 17981148 17981212 -83399309 + (TCTCTG)n Simple_repeat Simple_repeat 3 66 0 2019 82 50 4 chr15 17981212 17981491 -83399030 - AluY SINE Alu -19 292 1 1834 164 3 3 chr15 17984361 17984654 -83395867 - AluSg1 SINE Alu -15 294 2 2056 125 4 4 chr15 17984830 17985145 -83395376 + AluSg SINE Alu 1 315 0 2509 117 13 8 chr15 17986339 17986732 -83393789 + L1PA12 LINE L1 5774 6168 0 502 259 0 32 chr15 17987054 17987239 -83393282 - MER104 DNA MER2_type -1 179 1 562 292 93 40 chr15 17987341 17987589 -83392932 - MIR SINE MIR -1 261 4 318 26 0 0 chr15 17988783 17988804 -83391717 + (TG)n Simple_repeat Simple_repeat 1 60 0 318 26 0 0 chr15 17988804 17988843 -83391678 + (TG)n Simple_repeat Simple_repeat 2 40 0 264 367 36 36 chr15 17989343 17989482 -83391039 - MER5B DNA MER1_type 0 178 40 710 186 0 0 chr15 17989487 17989605 -83390916 + FLAM_A SINE Alu 1 118 -15 1073 207 161 8 chr15 17989779 17990040 -83390481 - AluJb SINE Alu -1 301 1 340 293 101 22 chr15 17991789 17991999 -83388522 + MIR SINE MIR 7 231 -31 572 189 9 9 chr15 17993888 17993994 -83386527 + U6 snRNA snRNA 1 106 -1 295 371 53 0 chr15 17994690 17994841 -83385680 - MIR SINE MIR -47 215 57 534 277 188 15 chr15 17995858 17996252 -83384269 - MLT1L LTR MaLR -153 462 1 181 296 56 28 chr15 17996258 17996329 -83384192 - L2 LINE L2 -565 2749 2677 852 224 47 47 chr15 17996334 17996548 -83383973 - MER58A DNA MER1_type -3 221 8 2066 153 7 0 chr15 17998329 17998636 -83381885 + AluSc SINE Alu 1 309 0 1364 195 136 49 chr15 17998739 17999228 -83381293 - LTR61 LTR ERV1 -2 593 1 28 61 0 0 chr15 17999722 17999771 -83380750 + AT_rich Low_complexity Low_complexity 1 49 0 52 50 0 0 chr15 18000815 18000895 -83379626 + AT_rich Low_complexity Low_complexity 1 80 0 1597 166 7 7 chr15 18002472 18002761 -83377760 - L1PA15 LINE L1 -1 6164 5876 336 313 173 50 chr15 18003421 18003983 -83376538 - L1M2 LINE L1 -5973 876 246 2106 129 0 3 chr15 18004734 18005036 -83375485 - AluSx SINE Alu -11 301 1 195 292 118 73 chr15 18005093 18005271 -83375250 - MIR3 SINE MIR 0 208 23 263 300 36 36 chr15 18006025 18006135 -83374386 + L2 LINE L2 3204 3313 0 399 261 120 20 chr15 18006445 18006631 -83373890 + MIR3 SINE MIR 3 206 -2 295 392 0 0 chr15 18007248 18007350 -83373171 + MIR SINE MIR 48 149 -59 310 258 17 17 chr15 18007874 18007994 -83372527 - MER112 DNA MER1_type -103 157 38 841 154 24 0 chr15 18008016 18008139 -83372382 - FLAM_C SINE Alu -17 126 1 907 89 0 16 chr15 18008574 18008697 -83371824 - AluSg/x SINE Alu -24 288 168 2151 121 0 0 chr15 18009074 18009363 -83371158 - AluSx SINE Alu -23 289 1 205 264 22 22 chr15 18009575 18009666 -83370855 + (TA)n Simple_repeat Simple_repeat 1 91 0 370 185 0 0 chr15 18010152 18010217 -83370304 - MER58A DNA MER1_type 0 224 160 941 167 25 19 chr15 18010221 18010383 -83370138 - AluJb SINE Alu -18 294 132 444 224 10 10 chr15 18010396 18010494 -83370027 - MER58A DNA MER1_type -9 98 1 25 65 0 0 chr15 18010943 18010989 -83369532 + AT_rich Low_complexity Low_complexity 1 46 0 2501 289 133 17 chr15 18011094 18011472 -83369049 + L2 LINE L2 1777 2110 -1203 1996 156 0 0 chr15 18011472 18011773 -83368748 - AluSx SINE Alu -11 301 1 2501 289 133 17 chr15 18011773 18012529 -83367992 + L2 LINE L2 2110 3040 -273 452 261 142 54 chr15 18012810 18013070 -83367451 + L2 LINE L2 3031 3313 0 21 0 0 0 chr15 18013203 18013224 -83367297 + AT_rich Low_complexity Low_complexity 1 21 0 1940 149 3 0 chr15 18013330 18013625 -83366896 - AluSx SINE Alu -16 296 1 22 0 0 0 chr15 18013630 18013652 -83366869 + AT_rich Low_complexity Low_complexity 1 22 0 1485 147 72 33 chr15 18014536 18014856 -83365665 + THE1C LTR MaLR 5 340 -35 507 73 0 0 chr15 18014856 18014924 -83365597 + (TA)n Simple_repeat Simple_repeat 1 68 0 1485 147 72 33 chr15 18014924 18014936 -83365585 + THE1C LTR MaLR 340 350 -25 3294 216 45 10 chr15 18014936 18015549 -83364972 - L1P5 LINE L1 -388 5766 5176 315 0 0 0 chr15 18015549 18015584 -83364937 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 3294 216 45 10 chr15 18015584 18016525 -83363996 - L1P5 LINE L1 -978 5176 4125 3098 147 29 10 chr15 18016765 18017276 -83363245 + MER1A DNA MER1_type 1 521 -8 201 216 39 0 chr15 18018491 18018542 -83361979 + (TGAA)n Simple_repeat Simple_repeat 1 53 0 21 0 0 0 chr15 18018579 18018600 -83361921 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr15 18019403 18019427 -83361094 + AT_rich Low_complexity Low_complexity 1 24 0 1685 205 10 0 chr15 18019947 18020240 -83360281 - AluJo SINE Alu -16 296 1 2357 89 3 3 chr15 18020553 18020856 -83359665 - AluSq SINE Alu -10 303 1 824 176 151 114 chr15 18021402 18021754 -83358767 - MLT1A1 LTR MaLR 0 365 1 21 0 0 0 chr15 18023290 18023311 -83357210 + AT_rich Low_complexity Low_complexity 1 21 0 367 186 15 7 chr15 18025045 18025140 -83355381 + L1M3 LINE L1 5683 5780 -382 27 29 0 0 chr15 18025409 18025443 -83355078 + AT_rich Low_complexity Low_complexity 1 34 0 278 259 0 12 chr15 18025578 18025659 -83354862 + (TATATG)n Simple_repeat Simple_repeat 5 84 0 402 301 75 63 chr15 18025804 18026203 -83354318 + L1M4 LINE L1 2110 2513 -3633 1773 182 106 40 chr15 18026559 18027032 -83353489 + MLT1D LTR MaLR 1 504 -1 279 167 0 0 chr15 18027487 18027535 -83352986 - L1PA12 LINE L1 -6273 1308 1261 4165 236 56 34 chr15 18027555 18030008 -83350513 + L1PA13 LINE L1 482 3042 -3755 2490 87 0 0 chr15 18030017 18030328 -83350193 + AluY SINE Alu 1 311 0 1450 223 127 19 chr15 18030420 18030901 -83349620 + MER4-int LTR ERV1 109 641 -5957 243 0 0 0 chr15 18031734 18031761 -83348760 + (TG)n Simple_repeat Simple_repeat 2 28 0 857 192 0 0 chr15 18031766 18031912 -83348609 - AluSg/x SINE Alu -31 281 136 1668 179 0 0 chr15 18033093 18033373 -83347148 + L1PA12 LINE L1 637 916 -6665 893 101 0 7 chr15 18033378 18033517 -83347004 + L1PA12 LINE L1 1616 1753 -5828 297 270 71 73 chr15 18033912 18034602 -83345919 + HSREP522 Satellite telomeric 1 688 -14 981 276 0 0 chr15 18035049 18035303 -83345218 + AluY SINE Alu 58 311 0 2092 155 77 14 chr15 18035341 18035887 -83344634 + MER4-int LTR ERV1 29 652 -5946 669 159 82 159 chr15 18035914 18036278 -83344243 + MER4-int LTR ERV1 762 1097 -5501 6092 86 6 0 chr15 18036286 18037358 -83343163 - L1PA7 LINE L1 -1 6153 5051 3066 119 8 4 chr15 18037384 18037897 -83342624 + L1P LINE L1 4555 5069 -1077 279 0 0 0 chr15 18038697 18038728 -83341793 + (T)n Simple_repeat Simple_repeat 1 31 0 2073 146 0 3 chr15 18038728 18039091 -83341430 - L1P LINE L1 -3825 2321 1960 1352 234 3 17 chr15 18039261 18039560 -83340961 - AluJo SINE Alu -16 296 2 1225 196 30 9 chr15 18040520 18040985 -83339536 + L1P4 LINE L1 5027 5496 -670 26 0 0 0 chr15 18040985 18041011 -83339510 + AT_rich Low_complexity Low_complexity 1 26 0 2157 113 0 10 chr15 18041131 18041431 -83339090 + AluSg SINE Alu 1 297 -13 1008 285 87 63 chr15 18041512 18043329 -83337192 - L1MCc LINE L1 -4326 2796 727 272 282 201 11 chr15 18044550 18044724 -83335797 - MIR SINE MIR 0 262 56 371 62 0 75 chr15 18044918 18044998 -83335523 + (TTTC)n Simple_repeat Simple_repeat 3 76 0 1586 189 3 25 chr15 18045001 18045318 -83335203 - AluJb SINE Alu -2 310 1 2220 196 37 4 chr15 18046744 18047263 -83333258 - L1MB3 LINE L1 -2 6181 5646 686 231 171 52 chr15 18047852 18048332 -83332189 + L1M4 LINE L1 4399 4935 -1211 396 0 0 0 chr15 18048343 18048387 -83332134 + (TG)n Simple_repeat Simple_repeat 1 44 0 267 309 47 0 chr15 18048431 18048580 -83331941 + L1MA10 LINE L1 6169 6324 -10 478 278 87 20 chr15 18048818 18049070 -83331451 + LTR37B LTR ERV1 198 466 -2 309 298 24 0 chr15 18050368 18050536 -83329985 + (CA)n Simple_repeat Simple_repeat 2 173 0 243 270 19 13 chr15 18050578 18050737 -83329784 + (CA)n Simple_repeat Simple_repeat 2 161 0 282 238 49 12 chr15 18050755 18050919 -83329602 + (CA)n Simple_repeat Simple_repeat 2 171 0 2140 88 0 3 chr15 18051047 18051343 -83329178 - AluY SINE Alu -16 295 1 25 0 0 0 chr15 18052500 18052525 -83327996 + AT_rich Low_complexity Low_complexity 1 25 0 3000 53 0 0 chr15 18052528 18052978 -83327543 + L1P2 LINE L1 4989 5438 -716 6277 149 18 13 chr15 18054464 18056058 -83324463 - L1MA1 LINE L1 -9 6293 4687 2221 125 3 0 chr15 18056205 18056517 -83324004 + AluSq SINE Alu 1 313 0 1030 234 64 72 chr15 18056839 18057355 -83323166 - L1ME1 LINE L1 -19 6147 5636 298 0 0 0 chr15 18058597 18058636 -83321885 + HY3 scRNA scRNA 62 100 -1 27 0 0 0 chr15 18058636 18058663 -83321858 + AT_rich Low_complexity Low_complexity 1 27 0 1834 198 58 28 chr15 18059195 18059696 -83320825 - L1MA7 LINE L1 -7 6284 5769 2262 211 60 28 chr15 18059700 18060348 -83320173 - L1MB8 LINE L1 -2 6176 5508 * 3975 193 40 18 chr15 18060342 18061860 -83318661 - L1MA7 LINE L1 -510 5781 4230 21 0 0 0 chr15 18063172 18063193 -83317328 + AT_rich Low_complexity Low_complexity 1 21 0 333 140 0 0 chr15 18064320 18064377 -83316144 + (A)n Simple_repeat Simple_repeat 1 57 0 33 73 0 0 chr15 18065084 18065152 -83315369 + AT_rich Low_complexity Low_complexity 1 68 0 454 230 0 9 chr15 18065152 18065265 -83315256 - L1MA7 LINE L1 -1904 4242 4131 425 257 167 46 chr15 18068886 18069095 -83311426 - MIR SINE MIR 0 262 34 199 158 26 0 chr15 18069120 18069158 -83311363 + MIR SINE MIR 102 140 -122 273 167 0 0 chr15 18070038 18070092 -83310429 + (CA)n Simple_repeat Simple_repeat 2 55 0 404 249 35 47 chr15 18070808 18070977 -83309544 + MLT1L LTR MaLR 422 588 -27 327 235 287 0 chr15 18071088 18071203 -83309318 + MIR SINE MIR 18 165 -97 1284 231 4 4 chr15 18071604 18071881 -83308640 - AluJb SINE Alu -35 277 1 25 31 0 0 chr15 18071961 18071993 -83308528 + AT_rich Low_complexity Low_complexity 1 32 0 1770 159 120 26 chr15 18072580 18072971 -83307550 + MSTA LTR MaLR 1 428 0 737 195 0 8 chr15 18073299 18073427 -83307094 + AluJb SINE Alu 6 132 -180 578 231 88 6 chr15 18073459 18073639 -83306882 + FAM SINE Alu 1 59 0 216 0 0 0 chr15 18074254 18074278 -83306243 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1012 199 5 0 chr15 18074396 18074582 -83305939 - MER3 DNA MER1_type 0 209 23 22 0 0 0 chr15 18075355 18075377 -83305144 + AT_rich Low_complexity Low_complexity 1 22 0 503 281 88 38 chr15 18075496 18075719 -83304802 + L1ME4a LINE L1 5535 5780 -341 1597 174 7 3 chr15 18075719 18076006 -83304515 - AluSx SINE Alu -23 289 2 503 281 88 38 chr15 18076006 18076102 -83304419 + L1ME4a LINE L1 5780 5870 -251 262 309 31 62 chr15 18076182 18076344 -83304177 + MIR SINE MIR 105 261 -1 183 114 0 0 chr15 18076373 18076408 -83304113 + (CA)n Simple_repeat Simple_repeat 1 35 0 326 252 18 72 chr15 18076454 18076565 -83303956 + L1ME4a LINE L1 6014 6118 -3 1512 201 10 16 chr15 18076607 18076920 -83303601 + AluJo SINE Alu 1 311 -1 2310 130 103 140 chr15 18076962 18077555 -83302966 - LTR4 LTR ERV1 0 596 26 207 167 0 0 chr15 18078681 18078723 -83301798 + (TGAA)n Simple_repeat Simple_repeat 1 42 0 720 236 62 0 chr15 18078816 18078977 -83301544 + MIR SINE MIR 20 190 -72 462 210 70 51 chr15 18079478 18079656 -83300865 + MLT1D LTR MaLR 6 193 -289 1104 181 4 69 chr15 18079658 18079934 -83300587 + AluJb SINE Alu 5 262 -50 1336 239 52 49 chr15 18083885 18084417 -83296104 + MER67C LTR ERV1 22 514 0 23 33 0 0 chr15 18084693 18084723 -83295798 + AT_rich Low_complexity Low_complexity 1 30 0 257 327 47 0 chr15 18084862 18084969 -83295552 - MIR SINE MIR -71 191 80 538 299 35 51 chr15 18085117 18085544 -83294977 + L1M3e LINE L1 466 1675 -4890 7931 234 43 33 chr15 18085782 18088632 -83291889 + L1M3e LINE L1 2007 4903 -2662 1474 184 6 32 chr15 18088632 18088947 -83291574 + AluJo SINE Alu 6 312 0 7931 234 43 33 chr15 18088947 18090097 -83290424 + L1M3e LINE L1 4903 6041 -1524 24 32 0 0 chr15 18090619 18090650 -83289871 + GC_rich Low_complexity Low_complexity 1 31 0 405 294 17 6 chr15 18092396 18092573 -83287948 + (CA)n Simple_repeat Simple_repeat 1 179 0 257 315 9 0 chr15 18092607 18092718 -83287803 + (CA)n Simple_repeat Simple_repeat 1 112 0 1069 169 15 0 chr15 18093728 18093923 -83286598 + MER49 LTR ERV1 715 912 -11 22 56 0 0 chr15 18095509 18095545 -83284976 + AT_rich Low_complexity Low_complexity 1 36 0 23 33 0 0 chr15 18097054 18097084 -83283437 + AT_rich Low_complexity Low_complexity 1 30 0 38 39 0 0 chr15 18097107 18097159 -83283362 + AT_rich Low_complexity Low_complexity 1 52 0 318 296 7 44 chr15 18097185 18097320 -83283201 - L1MDa LINE L1 -3961 2465 2336 2034 125 10 0 chr15 18097323 18097628 -83282893 - AluSp SINE Alu -3 310 3 590 318 52 16 chr15 18097851 18098235 -83282286 - L1MDa LINE L1 -3568 2858 2461 234 238 161 52 chr15 18098332 18098525 -83281996 - L1MDa LINE L1 -4282 2325 2112 378 312 50 72 chr15 18098552 18098707 -83281814 - L1MDa LINE L1 -4503 1923 1773 4563 17 6 0 chr15 18098707 18099224 -83281297 + L1PA3 LINE L1 5636 6155 0 378 312 50 72 chr15 18099224 18099289 -83281232 - L1MDa LINE L1 -4653 1773 1708 243 355 73 32 chr15 18099622 18099746 -83280775 - MIR SINE MIR -57 151 23 302 313 57 17 chr15 18100800 18100976 -83279545 + HERV16 LTR ERVL 2781 2963 -2033 970 65 0 0 chr15 18105010 18105133 -83275388 + AluY SINE Alu 1 123 -188 22 35 0 0 chr15 18105133 18105162 -83275359 + AT_rich Low_complexity Low_complexity 1 29 0 21 95 0 0 chr15 18105327 18105390 -83275131 + AT_rich Low_complexity Low_complexity 1 63 0 309 129 86 43 chr15 18107517 18107587 -83272934 + AluJ/FRAM SINE Alu 229 301 -1 1987 124 0 3 chr15 18107595 18107894 -83272627 + AluSp SINE Alu 1 298 -15 1496 168 37 17 chr15 18108204 18108501 -83272020 - AluJb SINE Alu -9 303 1 256 286 174 39 chr15 18108555 18108589 -83271932 + MIR SINE MIR 2 30 -232 204 67 0 0 chr15 18108589 18108619 -83271902 + (TTTG)n Simple_repeat Simple_repeat 3 32 0 256 286 174 39 chr15 18108619 18108762 -83271759 + MIR SINE MIR 30 203 -59 1675 101 0 0 chr15 18108769 18109007 -83271514 - AluSg/x SINE Alu -7 303 66 239 186 0 17 chr15 18109809 18109868 -83270653 + CT-rich Low_complexity Low_complexity 5 62 0 22 0 0 0 chr15 18110736 18110758 -83269763 + AT_rich Low_complexity Low_complexity 1 22 0 1968 150 0 3 chr15 18110809 18111122 -83269399 - AluSx SINE Alu 0 312 1 2319 79 0 0 chr15 18112715 18113018 -83267503 - AluY SINE Alu -8 303 1 301 294 32 54 chr15 18113432 18113653 -83266868 + L1ME LINE L1 5547 5762 -359 301 335 152 6 chr15 18113878 18114042 -83266479 - MIR3 SINE MIR -7 201 14 1438 81 5 0 chr15 18114431 18114616 -83265905 + AluSp SINE Alu 1 186 -127 21 0 0 0 chr15 18114786 18114807 -83265714 + AT_rich Low_complexity Low_complexity 1 21 0 378 0 0 0 chr15 18114969 18115011 -83265510 + (TAA)n Simple_repeat Simple_repeat 1 42 0 4647 70 22 31 chr15 18115049 18115486 -83265035 + PABL_B LTR ERV1 1 432 -235 2395 80 3 0 chr15 18115486 18115786 -83264735 + AluSp SINE Alu 1 301 -12 4647 70 22 31 chr15 18115786 18115993 -83264528 + PABL_B LTR ERV1 432 639 -28 326 336 76 72 chr15 18116185 18116700 -83263821 - LTR33A LTR ERVL -4 519 3 355 272 26 0 chr15 18116757 18116845 -83263676 - MIR3 SINE MIR -45 163 73 231 323 0 16 chr15 18116949 18117011 -83263510 + L2 LINE L2 3204 3264 -8 330 182 0 0 chr15 18117595 18117661 -83262860 + GA-rich Low_complexity Low_complexity 1 66 0 248 221 0 15 chr15 18118109 18118177 -83262344 + GA-rich Low_complexity Low_complexity 3 69 0 380 215 33 66 chr15 18118763 18118884 -83261637 + L1MC4 LINE L1 7434 7550 -492 453 292 38 14 chr15 18119314 18119523 -83260998 + L1MC4 LINE L1 7689 7902 -140 208 313 16 0 chr15 18119533 18119597 -83260924 + (TATG)n Simple_repeat Simple_repeat 4 68 0 338 230 36 43 chr15 18119598 18119737 -83260784 + L1MC4 LINE L1 7903 8040 -2 1557 157 28 0 chr15 18119806 18120054 -83260467 + AluJb SINE Alu 3 257 -55 271 207 0 0 chr15 18120138 18120196 -83260325 - MLT1I LTR MaLR -12 397 340 1522 186 11 0 chr15 18120341 18120656 -83259865 - AluJb SINE Alu 0 318 1 785 254 54 94 chr15 18121169 18121575 -83258946 + MLT1I LTR MaLR 18 407 -2 824 254 36 10 chr15 18122577 18122770 -83257751 - AluJb SINE Alu -28 284 87 2490 216 75 28 chr15 18123728 18124433 -83256088 - L1ME2 LINE L1 -37 6127 5390 229 200 0 0 chr15 18124470 18124510 -83256011 + L2 LINE L2 3265 3304 -9 1135 267 160 13 chr15 18126598 18127169 -83253352 - L2 LINE L2 -126 3187 2536 533 212 35 104 chr15 18127485 18127716 -83252805 + MER58C DNA MER1_type 1 215 0 21 0 0 0 chr15 18128721 18128742 -83251779 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr15 18128763 18128791 -83251730 + AT_rich Low_complexity Low_complexity 1 28 0 21 36 0 0 chr15 18129418 18129446 -83251075 + AT_rich Low_complexity Low_complexity 1 28 0 234 0 0 0 chr15 18129873 18129891 -83250630 + (CA)n Simple_repeat Simple_repeat 1 44 0 234 0 0 0 chr15 18129891 18129917 -83250604 + (CA)n Simple_repeat Simple_repeat 2 27 0 25 51 0 0 chr15 18130851 18130890 -83249631 + AT_rich Low_complexity Low_complexity 1 39 0 22 0 0 0 chr15 18131385 18131407 -83249114 + AT_rich Low_complexity Low_complexity 1 22 0 465 297 62 16 chr15 18131615 18131807 -83248714 + L1ME LINE L1 3 203 -5867 320 280 33 47 chr15 18131848 18131998 -83248523 + L1ME LINE L1 595 742 -5328 231 225 0 0 chr15 18136277 18136317 -83244204 + Tigger7 DNA MER2_type 228 267 -2220 270 176 20 0 chr15 18136330 18136381 -83244140 + Tigger7 DNA MER2_type 2536 2587 0 2036 128 0 19 chr15 18136413 18136726 -83243795 - AluSx SINE Alu -5 307 1 2240 61 7 17 chr15 18137117 18137442 -83243079 - AluY SINE Alu 0 311 1 466 190 20 0 chr15 18137672 18137772 -83242749 + L1MB5 LINE L1 5743 5844 -330 285 289 40 27 chr15 18138265 18138414 -83242107 - L1MC/D LINE L1 -2342 5466 5316 * 857 215 47 6 chr15 18138393 18138623 -83241898 - L1MB4 LINE L1 -119 6047 5792 1357 248 126 63 chr15 18138623 18138960 -83241561 - L1MB4 LINE L1 -1375 4771 4457 246 114 0 0 chr15 18138960 18138995 -83241526 - U2 snRNA snRNA -153 35 1 1357 248 126 63 chr15 18138995 18139528 -83240993 - L1MB4 LINE L1 -1689 4457 3810 849 318 146 52 chr15 18139530 18140256 -83240265 + L2 LINE L2 1822 2615 -699 855 322 107 29 chr15 18140352 18140725 -83239796 + L2 LINE L2 2824 3239 -74 960 139 0 0 chr15 18140725 18140883 -83239638 + (TA)n Simple_repeat Simple_repeat 2 159 0 855 322 107 29 chr15 18140883 18140956 -83239565 + L2 LINE L2 3239 3305 -8 663 317 45 5 chr15 18141416 18141759 -83238762 - LTR33 LTR ERVL -2 519 102 334 291 60 15 chr15 18141833 18141967 -83238554 - MLT1L LTR MaLR -112 503 364 225 309 85 0 chr15 18142376 18142470 -83238051 - L3 LINE CR1 -157 1420 1319 26 82 0 0 chr15 18143606 18143667 -83236854 + AT_rich Low_complexity Low_complexity 1 61 0 225 182 45 30 chr15 18193891 18193957 -83186564 - MLT1J LTR MaLR -51 460 394 2101 114 3 23 chr15 18194155 18194461 -83186060 - AluSg SINE Alu -10 300 1 434 266 87 52 chr15 18194537 18194829 -83185692 - L1M4 LINE L1 -2163 3983 3674 2439 82 0 7 chr15 18194829 18195134 -83185387 - AluY SINE Alu -4 307 5 434 266 87 52 chr15 18195134 18195210 -83185311 - L1M4 LINE L1 -2472 3674 3602 22 35 0 0 chr15 18195398 18195427 -83185094 + AT_rich Low_complexity Low_complexity 1 29 0 2011 129 11 52 chr15 18196346 18196694 -83183827 + MER1B DNA MER1_type 3 336 -1 431 281 97 72 chr15 18196881 18197312 -83183209 + HAL1b LINE L1 70 511 -837 6697 67 7 70 chr15 18197675 18199100 -83181421 + SVA Other Other 339 1402 0 28 48 0 0 chr15 18199119 18199161 -83181360 + AT_rich Low_complexity Low_complexity 1 42 0 2558 55 0 16 chr15 18201237 18201547 -83178974 - AluY SINE Alu -6 305 1 872 221 37 28 chr15 18201677 18201894 -83178627 - MER20 DNA MER1_type 0 219 1 353 286 93 65 chr15 18202282 18202572 -83177949 + HAL1 LINE L1 43 340 -2167 1999 142 3 28 chr15 18202853 18203171 -83177350 - AluJo SINE Alu -2 310 1 2137 138 3 0 chr15 18203235 18203540 -83176981 + AluSp SINE Alu 1 306 -7 311 261 119 40 chr15 18203579 18203755 -83176766 + HAL1 LINE L1 881 1070 -1437 570 248 122 91 chr15 18203822 18204297 -83176224 + MLT1H1 LTR MaLR 66 555 0 908 256 125 27 chr15 18204298 18204810 -83175711 + HAL1 LINE L1 1069 1630 -877 251 204 0 0 chr15 18204840 18204889 -83175632 - MIR SINE MIR -30 232 184 243 0 0 0 chr15 18204901 18204928 -83175593 + (CA)n Simple_repeat Simple_repeat 2 28 0 2043 116 32 0 chr15 18205057 18205341 -83175180 + AluSx SINE Alu 1 293 -19 2369 81 0 0 chr15 18206021 18206318 -83174203 + AluY SINE Alu 1 297 -14 235 319 8 34 chr15 18206429 18206548 -83173973 + CT-rich Low_complexity Low_complexity 6 121 0 21 0 0 0 chr15 18207398 18207419 -83173102 + AT_rich Low_complexity Low_complexity 1 21 0 2099 124 13 0 chr15 18207612 18207910 -83172611 - AluSg SINE Alu -6 304 3 1809 142 68 0 chr15 18208070 18208224 -83172297 - AluSx SINE Alu -12 300 158 1647 90 14 0 chr15 18208224 18208435 -83172086 - AluSg SINE Alu -85 225 12 1809 142 68 0 chr15 18208435 18208561 -83171960 - AluSx SINE Alu -154 158 1 913 144 0 0 chr15 18208564 18208696 -83171825 - FLAM_C SINE Alu -11 132 1 826 221 47 35 chr15 18209101 18209359 -83171162 - MER58B DNA MER1_type -1 340 80 2314 101 0 3 chr15 18209917 18210213 -83170308 - AluSg SINE Alu -15 295 1 22 0 0 0 chr15 18210472 18210494 -83170027 + AT_rich Low_complexity Low_complexity 1 22 0 289 319 111 25 chr15 18211947 18212496 -83168025 + HAL1b LINE L1 293 888 -460 41 48 0 0 chr15 18212754 18212816 -83167705 + AT_rich Low_complexity Low_complexity 1 62 0 30 77 0 0 chr15 18212947 18213012 -83167509 + AT_rich Low_complexity Low_complexity 1 65 0 21 0 0 0 chr15 18214283 18214304 -83166217 + AT_rich Low_complexity Low_complexity 1 21 0 2309 85 0 3 chr15 18214367 18214661 -83165860 + AluY SINE Alu 1 293 -18 318 26 0 0 chr15 18214661 18214700 -83165821 + (CATA)n Simple_repeat Simple_repeat 2 40 0 2095 107 0 53 chr15 18215073 18215391 -83165130 - AluSg SINE Alu -9 301 1 243 0 0 0 chr15 18216450 18216477 -83164044 + (CA)n Simple_repeat Simple_repeat 2 28 0 2001 125 0 34 chr15 18217301 18217598 -83162923 + AluSx SINE Alu 1 287 -25 25 0 0 0 chr15 18217598 18217623 -83162898 + AT_rich Low_complexity Low_complexity 1 25 0 650 218 69 55 chr15 18218296 18218498 -83162023 - MIR SINE MIR 0 262 58 26 0 0 0 chr15 18220960 18220986 -83159535 + AT_rich Low_complexity Low_complexity 1 26 0 195 42 0 0 chr15 18221260 18221284 -83159237 + (T)n Simple_repeat Simple_repeat 1 24 0 7750 39 2 3 chr15 18223565 18224510 -83156011 + L1PA4 LINE L1 5209 6152 -3 2057 141 0 0 chr15 18224780 18225079 -83155442 - AluSx SINE Alu -13 299 1 2401 92 0 0 chr15 18225448 18225752 -83154769 - AluSg SINE Alu -2 308 5 2213 262 96 10 chr15 18225766 18226541 -83153980 - L1ME1 LINE L1 -3 6163 5323 630 171 49 0 chr15 18226617 18226740 -83153781 - LTR53 LTR ERVL -40 479 351 26 30 0 0 chr15 18227066 18227099 -83153422 + AT_rich Low_complexity Low_complexity 1 33 0 2704 160 86 0 chr15 18227099 18227623 -83152898 - L1MB3 LINE L1 -8 6175 5607 2167 92 7 3 chr15 18227629 18227921 -83152600 - AluY SINE Alu -18 293 1 909 157 0 0 chr15 18227963 18228097 -83152424 - FRAM SINE Alu -25 151 18 657 218 46 6 chr15 18228972 18229146 -83151375 + L1ME2 LINE L1 5982 6162 -2 2220 110 3 0 chr15 18229166 18229466 -83151055 + AluSx SINE Alu 1 301 -11 874 160 17 66 chr15 18230106 18230287 -83150234 - AluSg/x SINE Alu -13 299 128 351 280 0 24 chr15 18230631 18230756 -83149765 + CT-rich Low_complexity Low_complexity 3 124 0 507 291 0 7 chr15 18230790 18231461 -83149060 + CT-rich Low_complexity Low_complexity 1 666 0 277 325 195 0 chr15 18232115 18232238 -83148283 - MIR3 SINE MIR -9 199 53 1344 97 0 0 chr15 18232578 18232754 -83147767 - AluSp SINE Alu -2 311 136 536 254 179 20 chr15 18232889 18233090 -83147431 - MIR SINE MIR -10 252 20 363 44 0 0 chr15 18233284 18233329 -83147192 + (CA)n Simple_repeat Simple_repeat 2 46 0 252 154 39 0 chr15 18233333 18233385 -83147136 - L1MC4a LINE L1 -1870 5938 5885 269 265 68 26 chr15 18234718 18234835 -83145686 - L2 LINE L2 -5 3308 3187 196 282 176 0 chr15 18234832 18234917 -83145604 - MIR3 SINE MIR 0 208 109 * 2034 109 13 33 chr15 18235276 18235579 -83144942 + AluSx SINE Alu 3 299 -13 576 204 138 13 chr15 18235732 18235884 -83144637 + MIR SINE MIR 28 198 -64 26 30 0 0 chr15 18235927 18235960 -83144561 + AT_rich Low_complexity Low_complexity 1 33 0 1735 153 19 16 chr15 18238986 18239294 -83141227 + L1MB7 LINE L1 5876 6184 0 887 168 14 0 chr15 18239777 18239955 -83140566 + AluJb SINE Alu 138 317 0 1870 195 23 21 chr15 18239955 18240340 -83140181 + L1MB2 LINE L1 5778 6163 -8 1642 216 90 38 chr15 18240939 18241383 -83139138 - MLT1D LTR MaLR 0 505 39 1182 117 6 0 chr15 18241386 18241557 -83138964 - L1PA11 LINE L1 -232 5942 5771 1633 218 128 2 chr15 18241557 18241970 -83138551 - MLT2B1 LTR ERVL -55 465 1 372 97 194 0 chr15 18241971 18242043 -83138478 + AluJb SINE Alu 24 109 -193 1739 145 30 13 chr15 18242045 18242349 -83138172 - AluSp SINE Alu -3 310 2 685 131 9 9 chr15 18242379 18242486 -83138035 + AluJb SINE Alu 2 108 -204 1761 147 13 19 chr15 18242492 18242805 -83137716 - AluSp SINE Alu -2 311 1 815 133 23 0 chr15 18242810 18242938 -83137583 - AluSp SINE Alu -180 133 3 616 179 18 9 chr15 18242969 18243081 -83137440 + AluJb SINE Alu 2 114 -198 1749 144 13 16 chr15 18243081 18243387 -83137134 - AluSp SINE Alu -4 309 5 1406 155 12 81 chr15 18243421 18243538 -83136983 + AluJo SINE Alu 1 124 -188 1688 116 23 76 chr15 18243538 18243840 -83136681 - AluSp SINE Alu -26 287 2 1406 155 12 81 chr15 18243840 18244057 -83136464 + AluJo SINE Alu 124 312 0 185 232 143 0 chr15 18244316 18244372 -83136149 - MIR SINE MIR -93 169 106 24 67 0 0 chr15 18245499 18245544 -83134977 + AT_rich Low_complexity Low_complexity 1 45 0 28 0 0 0 chr15 18245800 18245828 -83134693 + AT_rich Low_complexity Low_complexity 1 28 0 205 180 49 0 chr15 18246105 18246166 -83134355 + (TTA)n Simple_repeat Simple_repeat 3 66 0 306 125 0 0 chr15 18246687 18246735 -83133786 + (A)n Simple_repeat Simple_repeat 1 48 0 2182 102 0 30 chr15 18246739 18247042 -83133479 + AluY SINE Alu 5 298 -13 420 20 0 0 chr15 18247305 18247354 -83133167 + (TA)n Simple_repeat Simple_repeat 1 49 0 993 220 114 32 chr15 18248048 18248425 -83132096 - LTR37A LTR ERV1 0 426 19 218 122 0 41 chr15 18248704 18248753 -83131768 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 2376 71 0 19 chr15 18250003 18250313 -83130208 + AluY SINE Alu 1 304 -7 2079 137 0 0 chr15 18250666 18250973 -83129548 - AluSx SINE Alu -5 307 1 234 225 122 27 chr15 18251028 18251161 -83129360 - MIR SINE MIR -59 203 52 21 36 0 0 chr15 18252185 18252213 -83128308 + AT_rich Low_complexity Low_complexity 1 28 0 664 256 84 9 chr15 18252314 18252529 -83127992 - L1ME3 LINE L1 -199 5963 5733 244 263 62 0 chr15 18252532 18252612 -83127909 - L1ME3 LINE L1 -536 5634 5550 2599 56 0 0 chr15 18252761 18253063 -83127458 + AluY SINE Alu 1 302 -9 484 272 35 99 chr15 18254168 18254254 -83126267 - MIR SINE MIR -49 213 123 1703 113 4 0 chr15 18254254 18254484 -83126037 - AluSx SINE Alu -24 288 58 484 272 35 99 chr15 18254484 18254599 -83125922 - MIR SINE MIR -139 123 25 196 313 164 36 chr15 18254975 18255170 -83125351 - L2 LINE L2 -8 3264 3045 1807 102 82 0 chr15 18255357 18255613 -83124908 + AluSq SINE Alu 35 311 -2 181 348 58 29 chr15 18255619 18255757 -83124764 - L2 LINE L2 -401 2913 2772 298 215 31 0 chr15 18255767 18255832 -83124689 - MLT1K LTR MaLR -39 549 483 251 364 0 68 chr15 18256067 18256199 -83124322 + MIR SINE MIR 24 146 -62 2420 78 0 0 chr15 18256229 18256523 -83123998 - AluY SINE Alu -17 294 1 452 194 21 0 chr15 18257121 18257214 -83123307 - MER103 DNA DNA -21 145 51 300 275 18 37 chr15 18257260 18257369 -83123152 + MER5C DNA MER1_type 18 124 -200 1416 140 189 53 chr15 18257831 18258075 -83122446 + MER47A DNA MER2_type 1 210 -2113 207 0 0 0 chr15 18258075 18258098 -83122423 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 2140 108 3 7 chr15 18258102 18258390 -83122131 - AluSq SINE Alu -26 287 1 1416 140 189 53 chr15 18258390 18258462 -83122059 + MER47A DNA MER2_type 212 366 0 2300 67 37 3 chr15 18259262 18259559 -83120962 - AluY SINE Alu 0 311 5 318 148 0 0 chr15 18259563 18259617 -83120904 + (T)n Simple_repeat Simple_repeat 1 54 0 351 0 0 0 chr15 18260864 18260903 -83119618 + (TG)n Simple_repeat Simple_repeat 2 40 0 243 224 0 0 chr15 18260915 18260964 -83119557 + MIR SINE MIR 184 232 -30 1009 249 127 31 chr15 18260994 18261507 -83119014 - HAL1 LINE L1 -877 1630 1069 562 240 122 91 chr15 18261508 18261983 -83118538 - MLT1H1 LTR MaLR 0 555 66 291 242 121 25 chr15 18262050 18262248 -83118273 - HAL1 LINE L1 -1437 1070 854 2305 117 0 0 chr15 18262266 18262574 -83117947 - AluSp SINE Alu -5 308 1 1937 141 19 29 chr15 18262638 18262951 -83117570 + AluJo SINE Alu 1 310 -2 419 297 90 62 chr15 18263232 18263522 -83116999 - HAL1 LINE L1 -2167 340 43 1037 203 37 28 chr15 18263906 18264123 -83116398 + MER20 DNA MER1_type 1 219 0 2466 59 7 13 chr15 18264254 18264559 -83115962 + AluY SINE Alu 1 303 -8 400 276 168 41 chr15 18264660 18264975 -83115546 - L1M4 LINE L1 -2884 3262 2908 33 0 0 0 chr15 18264990 18265023 -83115498 + AT_rich Low_complexity Low_complexity 1 33 0 2030 125 7 0 chr15 18265038 18265318 -83115203 - AluY SINE Alu -29 282 1 211 259 0 19 chr15 18265637 18265691 -83114830 + (CA)n Simple_repeat Simple_repeat 2 54 0 345 269 62 46 chr15 18267983 18268002 -83112519 + MIR SINE MIR 16 33 -229 2272 97 7 3 chr15 18268002 18268300 -83112221 + AluY SINE Alu 1 299 -12 345 269 62 46 chr15 18268300 18268410 -83112111 + MIR SINE MIR 33 147 -115 281 336 131 0 chr15 18269388 18269525 -83110996 + MIR3 SINE MIR 31 185 -23 304 278 70 17 chr15 18269545 18269660 -83110861 + L2 LINE L2 3188 3308 -5 239 173 27 80 chr15 18270936 18270989 -83109532 + L1MC4a LINE L1 5885 5934 -1874 282 56 0 0 chr15 18270989 18271025 -83109496 + (TG)n Simple_repeat Simple_repeat 2 37 0 239 173 27 80 chr15 18271025 18271046 -83109475 + L1MC4a LINE L1 5934 5955 -1853 220 216 39 0 chr15 18272240 18272291 -83108230 + MIR SINE MIR 95 147 -61 1871 141 0 54 chr15 18273325 18273638 -83106883 + AluSx SINE Alu 2 297 -15 252 238 197 8 chr15 18273655 18273777 -83106744 + MIR SINE MIR 48 192 -70 934 163 0 18 chr15 18274483 18274649 -83105872 + 7SLRNA srpRNA srpRNA 95 257 -63 261 57 0 0 chr15 18275774 18275809 -83104712 + (TGGGGG)n Simple_repeat Simple_repeat 6 40 0 189 0 0 0 chr15 18278293 18278314 -83102207 + (A)n Simple_repeat Simple_repeat 1 21 0 237 213 0 0 chr15 18278314 18278361 -83102160 + L2 LINE L2 3263 3309 -4 23 0 0 0 chr15 18278879 18278902 -83101619 + AT_rich Low_complexity Low_complexity 1 23 0 712 273 42 118 chr15 18279348 18279748 -83100773 + LTR16A LTR ERVL 68 437 -13 852 134 0 24 chr15 18279963 18280090 -83100431 + FLAM_C SINE Alu 1 124 -9 1948 112 0 0 chr15 18281102 18281360 -83099161 + AluSx SINE Alu 45 302 -10 237 366 30 22 chr15 18281555 18281689 -83098832 - L2 LINE L2 -2516 798 664 528 262 94 20 chr15 18282114 18282316 -83098205 - MIR SINE MIR -30 232 16 3499 97 15 0 chr15 18282557 18283022 -83097499 - L1PA10 LINE L1 -1 6167 5696 1310 77 0 0 chr15 18283027 18283197 -83097324 + L1PA10 LINE L1 5517 5686 -482 2517 60 0 0 chr15 18284646 18284945 -83095576 - AluY SINE Alu -12 299 1 244 300 225 0 chr15 18285475 18285595 -83094926 - MIR SINE MIR 0 262 116 245 208 21 0 chr15 18285949 18286045 -83094476 + (TCTA)n Simple_repeat Simple_repeat 4 101 0 5168 126 22 19 chr15 18286655 18287432 -83093089 - MER4E LTR ERV1 0 779 1 24 0 0 0 chr15 18287673 18287697 -83092824 + AT_rich Low_complexity Low_complexity 1 24 0 2516 75 0 0 chr15 18287723 18288031 -83092490 + AluY SINE Alu 1 308 -3 1643 97 20 16 chr15 18289984 18290231 -83090290 - THE1C LTR MaLR -127 248 1 1581 154 68 7 chr15 18291104 18291383 -83089138 + AluSx SINE Alu 1 296 -16 2097 137 3 0 chr15 18291388 18291695 -83088826 + AluSg SINE Alu 1 308 -2 41 98 0 0 chr15 18291712 18291844 -83088677 + AT_rich Low_complexity Low_complexity 1 132 0 24 77 0 0 chr15 18291892 18291944 -83088577 + AT_rich Low_complexity Low_complexity 1 52 0 2026 93 31 10 chr15 18292101 18292392 -83088129 - AluY SINE Alu -14 297 1 2054 97 24 7 chr15 18292395 18292683 -83087838 - AluSc SINE Alu -16 293 1 2475 40 0 13 chr15 18293333 18293635 -83086886 - AluY SINE Alu -13 298 1 1161 239 122 29 chr15 18293648 18294066 -83086455 - MLT1E2 LTR MaLR -169 457 1 223 283 25 82 chr15 18294128 18294287 -83086234 - L2 LINE L2 -991 2323 2174 237 132 0 0 chr15 18294491 18294529 -83085992 + (CACG)n Simple_repeat Simple_repeat 1 38 0 309 211 13 0 chr15 18294530 18294606 -83085915 + MLT1D LTR MaLR 429 505 0 3770 200 61 11 chr15 18294644 18295449 -83085072 + L1MB7 LINE L1 4735 5636 -548 2027 118 0 0 chr15 18295449 18295728 -83084793 + AluSx SINE Alu 34 312 0 3770 200 61 11 chr15 18295728 18296286 -83084235 + L1MB7 LINE L1 5636 6165 -19 337 283 261 11 chr15 18296318 18296771 -83083750 + L1M4 LINE L1 3826 4391 -1755 209 200 0 0 chr15 18297369 18297409 -83083112 + (CAGAGA)n Simple_repeat Simple_repeat 3 42 0 424 171 68 0 chr15 18298610 18298698 -83081823 + MSTC LTR MaLR 1 94 -334 227 300 50 40 chr15 18298844 18298944 -83081577 - L2 LINE L2 -3 3269 3169 2286 74 7 7 chr15 18300007 18300303 -83080218 + AluY SINE Alu 1 296 -15 2284 72 10 7 chr15 18300316 18300609 -83079912 + AluY SINE Alu 2 295 -16 540 218 142 58 chr15 18300610 18300835 -83079686 - L1MC4a LINE L1 -1520 6288 6045 1845 208 42 17 chr15 18300980 18301336 -83079185 - MLT1A1 LTR MaLR 0 365 1 2868 105 0 5 chr15 18301630 18302021 -83078500 - MER1A DNA MER1_type 0 529 141 21 36 0 0 chr15 18304503 18304531 -83075990 + AT_rich Low_complexity Low_complexity 1 28 0 36 62 0 0 chr15 18304987 18305051 -83075470 + AT_rich Low_complexity Low_complexity 1 64 0 1513 115 5 0 chr15 18305219 18305427 -83075094 + AluSc SINE Alu 84 292 -17 22 0 0 0 chr15 18305700 18305722 -83074799 + AT_rich Low_complexity Low_complexity 1 22 0 2381 109 0 0 chr15 18305755 18306066 -83074455 - AluSx SINE Alu -1 311 1 482 270 138 6 chr15 18306099 18306258 -83074263 - L1MD3 LINE L1 -1153 6842 6663 2115 134 3 6 chr15 18306350 18306663 -83073858 - AluSx SINE Alu 0 312 1 436 314 147 17 chr15 18306852 18307116 -83073405 - L1MC4a LINE L1 -1561 6247 5926 1961 133 3 7 chr15 18307116 18307424 -83073097 - AluSq SINE Alu -6 307 1 436 314 147 17 chr15 18307424 18307506 -83073015 - L1MC4a LINE L1 -1882 5926 5856 28 0 0 0 chr15 18308442 18308470 -83072051 + AT_rich Low_complexity Low_complexity 1 28 0 342 0 0 0 chr15 18308483 18308521 -83072000 + (CA)n Simple_repeat Simple_repeat 1 38 0 854 223 118 28 chr15 18308674 18308961 -83071560 - L1ME2 LINE L1 -1 6163 5851 1932 140 13 13 chr15 18310025 18310325 -83070196 - AluSg1 SINE Alu -9 300 1 972 209 42 35 chr15 18310556 18310815 -83069706 - MER58B DNA MER1_type -1 340 80 1627 87 8 75 chr15 18310821 18311073 -83069448 + AluSx SINE Alu 1 235 -77 233 269 0 0 chr15 18311118 18311170 -83069351 - MER58B DNA MER1_type -277 64 13 297 0 0 0 chr15 18311176 18311209 -83069312 + (CA)n Simple_repeat Simple_repeat 1 33 0 812 209 65 13 chr15 18311319 18311549 -83068972 - L1ME2 LINE L1 -2221 5564 5323 2027 169 120 2 chr15 18311622 18312047 -83068474 - LTR53 LTR ERVL -40 479 5 588 246 17 17 chr15 18312092 18312271 -83068250 - L1MDa LINE L1 -4821 1719 1541 458 226 73 7 chr15 18312278 18312415 -83068106 + MER21B LTR ERV1 661 806 -57 2430 86 0 0 chr15 18312988 18313289 -83067232 - AluY SINE Alu -10 301 1 25 31 0 0 chr15 18313701 18313733 -83066788 + AT_rich Low_complexity Low_complexity 1 32 0 660 137 0 0 chr15 18313733 18313835 -83066686 - L1MB3 LINE L1 -8 6175 6074 648 237 0 0 chr15 18313845 18313963 -83066558 - FLAM_C SINE Alu -24 119 2 1532 155 43 18 chr15 18313964 18314242 -83066279 - L1MB3 LINE L1 -572 5608 5324 2193 110 3 13 chr15 18314243 18314551 -83065970 - AluSq SINE Alu -8 305 1 1333 108 0 0 chr15 18314560 18314736 -83065785 - AluY SINE Alu -5 306 131 867 184 0 13 chr15 18315112 18315264 -83065257 + FRAM SINE Alu 6 155 -21 262 350 34 0 chr15 18315272 18315389 -83065132 + MIR SINE MIR 141 261 -1 2137 203 69 19 chr15 18315412 18315978 -83064543 - L1MEc LINE L1 -2870 3345 2752 1263 126 0 0 chr15 18315978 18316145 -83064376 + AluSq SINE Alu 1 167 -146 416 172 0 0 chr15 18316145 18316209 -83064312 + AluS SINE Alu 233 296 -15 755 258 144 25 chr15 18316902 18317270 -83063251 - L1MEc LINE L1 -3589 2626 2215 355 302 42 28 chr15 18317279 18317491 -83063030 - L1MEc LINE L1 -4332 2064 1850 2025 118 0 36 chr15 18317524 18317829 -83062692 - AluSq SINE Alu -19 294 1 1882 96 15 33 chr15 18317831 18318103 -83062418 - AluSp SINE Alu -13 300 34 2299 101 7 3 chr15 18318358 18318664 -83061857 + AluY SINE Alu 1 307 -4 325 285 89 0 chr15 18318697 18318820 -83061701 + MIR SINE MIR 129 262 0 4383 221 54 54 chr15 18319733 18321435 -83059086 - L1MDa LINE L1 -2118 4422 2722 2129 110 27 7 chr15 18321435 18321727 -83058794 - AluSq SINE Alu -15 298 1 4383 221 54 54 chr15 18321727 18322160 -83058361 - L1MDa LINE L1 -3818 2722 2291 1638 161 83 9 chr15 18322160 18322496 -83058025 + MER46B DNA MER2_type 1 236 0 4383 221 54 54 chr15 18322496 18323305 -83057216 - L1MDa LINE L1 -4249 2291 1483 192 40 0 0 chr15 18323305 18323330 -83057191 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 369 149 0 0 chr15 18323352 18323419 -83057102 + (TCCCG)n Simple_repeat Simple_repeat 4 70 0 1856 146 4 0 chr15 18323421 18323696 -83056825 - AluSg SINE Alu -34 276 1 315 217 80 51 chr15 18325190 18325365 -83055156 - L1MC4a LINE L1 -1926 5882 5703 2371 89 0 3 chr15 18325367 18325670 -83054851 + AluSq SINE Alu 1 302 -11 990 61 0 0 chr15 18326045 18326159 -83054362 - AluY SINE Alu -197 114 1 540 295 70 44 chr15 18326162 18326616 -83053905 - L1MC5 LINE L1 -179 7782 7317 365 214 32 97 chr15 18326784 18326938 -83053583 - L1MC5 LINE L1 -861 7100 6957 526 231 35 35 chr15 18326992 18327195 -83053326 - L1M4 LINE L1 -3097 3049 2847 352 267 22 0 chr15 18327263 18327353 -83053168 - L1M4 LINE L1 -3327 2819 2728 1978 163 0 0 chr15 18329458 18329747 -83050774 + AluJb SINE Alu 1 289 -23 2345 92 7 0 chr15 18329756 18330051 -83050470 + AluSq SINE Alu 1 297 -16 207 367 61 0 chr15 18330487 18330585 -83049936 - L2 LINE L2 -1 3271 3168 2385 85 3 0 chr15 18333852 18334146 -83046375 - AluSc SINE Alu -14 295 1 2029 219 75 39 chr15 18334609 18335193 -83045328 - MER77 LTR ERV1 0 605 1 1029 254 53 22 chr15 18335347 18335670 -83044851 + MER58B DNA MER1_type 4 336 -5 22 0 0 0 chr15 18335840 18335862 -83044659 + AT_rich Low_complexity Low_complexity 1 22 0 3830 192 62 59 chr15 18338292 18339108 -83041413 - L1MB5 LINE L1 0 6174 5361 2365 106 0 0 chr15 18339108 18339419 -83041102 - AluSx SINE Alu -1 311 1 3830 192 62 59 chr15 18339419 18340312 -83040209 - L1MB5 LINE L1 -813 5361 4457 1604 216 71 21 chr15 18340317 18340458 -83040063 - L1MB5 LINE L1 -2486 3660 3527 2445 73 0 0 chr15 18340458 18340758 -83039763 - AluY SINE Alu -11 300 1 1604 216 71 21 chr15 18340758 18340999 -83039522 - L1MB5 LINE L1 -2619 3527 3243 2243 115 0 13 chr15 18340999 18341312 -83039209 - AluSc SINE Alu 0 309 1 1604 216 71 21 chr15 18341312 18341451 -83039070 - L1MB5 LINE L1 -2903 3243 3112 984 199 0 5 chr15 18341456 18341652 -83038869 - AluJb SINE Alu 0 312 118 1446 227 56 13 chr15 18341652 18342114 -83038407 - L1MB5 LINE L1 -3052 3094 2613 1633 148 0 44 chr15 18342247 18342518 -83038003 + AluJb SINE Alu 23 281 -31 198 128 0 0 chr15 18342533 18342572 -83037949 + (TCTG)n Simple_repeat Simple_repeat 2 40 0 210 183 56 0 chr15 18342573 18342644 -83037877 + (TA)n Simple_repeat Simple_repeat 1 75 0 1890 265 50 47 chr15 18342650 18343617 -83036904 - HERVL68 LTR ERVL -1920 1117 60 2293 176 109 0 chr15 18343625 18344130 -83036391 - MER68 LTR ERV1 -2 560 1 1485 170 80 43 chr15 18347321 18347733 -83032788 - MLT1C LTR MaLR 0 467 1 855 239 128 51 chr15 18347734 18348123 -83032398 - MLT1C LTR MaLR -46 421 3 347 316 6 0 chr15 18348952 18349123 -83031398 + (TG)n Simple_repeat Simple_repeat 1 172 0 779 141 0 0 chr15 18349600 18349721 -83030800 + FLAM_A SINE Alu 20 140 -2 2235 108 0 13 chr15 18350550 18350856 -83029665 + AluSg SINE Alu 1 302 -8 2256 86 7 13 chr15 18352432 18352736 -83027785 - AluSx SINE Alu -10 302 1 312 258 10 0 chr15 18354901 18355000 -83025521 + MER5A DNA MER1_type 10 98 -80 2385 88 0 0 chr15 18355234 18355531 -83024990 + AluY SINE Alu 3 299 -12 918 135 0 81 chr15 18355531 18355716 -83024805 + AluSg/x SINE Alu 134 303 -9 1003 197 170 3 chr15 18355860 18356012 -83024509 + MER2 DNA MER2_type 2 127 -217 2584 74 0 0 chr15 18356012 18356323 -83024198 + AluY SINE Alu 1 311 0 1003 197 170 3 chr15 18356323 18356464 -83024057 + MER2 DNA MER2_type 127 344 0 281 119 174 55 chr15 18356566 18356675 -83023846 + L1ME4a LINE L1 5999 6120 -1 929 178 40 0 chr15 18357723 18357897 -83022624 + MER58A DNA MER1_type 44 224 0 1771 128 33 56 chr15 18358222 18358526 -83021995 + AluSg SINE Alu 1 297 -13 1954 147 0 20 chr15 18358755 18359055 -83021466 - AluSx SINE Alu -18 294 1 192 97 0 0 chr15 18361073 18361104 -83019417 + (TG)n Simple_repeat Simple_repeat 2 32 0 2547 70 0 0 chr15 18361361 18361662 -83018859 + AluY SINE Alu 1 301 -10 814 219 39 2 chr15 18362333 18362539 -83017982 - MIR SINE MIR -21 241 31 2093 125 3 0 chr15 18362541 18362838 -83017683 - AluSx SINE Alu -14 298 1 191 105 53 0 chr15 18363720 18363758 -83016763 + (TATATG)n Simple_repeat Simple_repeat 3 42 0 1678 142 9 89 chr15 18363758 18364095 -83016426 - AluJo SINE Alu -2 310 1 2802 193 78 70 chr15 18364103 18364985 -83015536 - L1ME1 LINE L1 -65 6101 5223 2588 122 32 32 chr15 18364985 18365418 -83015103 - Tigger2a DNA MER2_type -1 433 1 2802 193 78 70 chr15 18365418 18365455 -83015066 - L1ME1 LINE L1 -943 5223 5188 2158 119 3 0 chr15 18365986 18366281 -83014240 - AluSx SINE Alu -11 301 6 381 255 7 0 chr15 18367123 18367264 -83013257 - L1MEd LINE L1 -5279 840 699 934 218 84 4 chr15 18367287 18367512 -83013009 - L1MD3 LINE L1 -24 7971 7729 385 248 35 0 chr15 18367510 18367623 -83012898 - L1MEd LINE L1 -5405 714 598 * 302 274 38 17 chr15 18368029 18368206 -83012315 + MER58C DNA MER1_type 9 206 -9 1957 170 0 0 chr15 18369114 18369420 -83011101 - AluJb SINE Alu -6 306 1 280 399 51 22 chr15 18370985 18371123 -83009398 - L2 LINE L2 -22 3250 3109 182 214 125 18 chr15 18371424 18371480 -83009041 - L2 LINE L2 0 3272 3211 342 288 36 36 chr15 18372448 18372559 -83007962 + MER91A DNA MER1_type 66 176 -20 210 288 51 0 chr15 18372803 18372862 -83007659 - L2 LINE L2 0 3272 3211 2272 93 0 32 chr15 18373030 18373342 -83007179 - AluSc SINE Alu -7 302 1 969 197 81 102 chr15 18373418 18373753 -83006768 + MER58B DNA MER1_type 4 331 -10 442 290 92 22 chr15 18373766 18374007 -83006514 + L2 LINE L2 2770 3037 -276 450 319 81 0 chr15 18374726 18374886 -83005635 - MIR SINE MIR -17 245 73 405 248 335 9 chr15 18374959 18375177 -83005344 - L1MC4a LINE L1 -1547 6261 5973 409 202 29 0 chr15 18375260 18375364 -83005157 - L1MC4a LINE L1 -1853 5955 5849 210 191 29 15 chr15 18375558 18375626 -83004895 + CT-rich Low_complexity Low_complexity 4 72 0 1660 166 59 10 chr15 18376143 18376433 -83004088 - AluJb SINE Alu -8 304 1 248 295 27 27 chr15 18376516 18376628 -83003893 + (TCTCTG)n Simple_repeat Simple_repeat 2 113 0 671 298 55 35 chr15 18376706 18376961 -83003560 + MIR SINE MIR 3 262 0 2559 52 0 0 chr15 18377602 18377907 -83002614 - AluY SINE Alu -5 306 2 190 367 18 28 chr15 18378849 18378958 -83001563 - L2 LINE L2 -222 3050 2943 6939 31 1 3 chr15 18379502 18380376 -83000145 - L1PA4 LINE L1 0 6155 5284 22 0 0 0 chr15 18380615 18380637 -82999884 + AT_rich Low_complexity Low_complexity 1 22 0 378 323 109 19 chr15 18380638 18380895 -82999626 + L1MC/D LINE L1 4567 4846 -1300 427 255 83 23 chr15 18381220 18381436 -82999085 + L1MC/D LINE L1 5254 5482 -2326 259 244 126 0 chr15 18381759 18381894 -82998627 + MER103 DNA DNA 13 164 -2 223 191 24 0 chr15 18382673 18382715 -82997806 + (TATG)n Simple_repeat Simple_repeat 4 46 0 410 303 98 101 chr15 18382916 18383628 -82996893 - L1M2 LINE L1 -5760 1089 493 26 30 0 0 chr15 18384873 18384906 -82995615 + AT_rich Low_complexity Low_complexity 1 33 0 2104 92 10 0 chr15 18385474 18385768 -82994753 - AluY SINE Alu -14 297 1 2278 92 3 0 chr15 18385941 18386234 -82994287 - AluSp SINE Alu -19 294 1 300 246 27 45 chr15 18386242 18386352 -82994169 - L1MC4a LINE L1 -271 5850 5743 24 0 0 0 chr15 18386679 18386703 -82993818 + AT_rich Low_complexity Low_complexity 1 24 0 654 216 8 8 chr15 18386805 18386930 -82993591 - FLAM_C SINE Alu -16 127 3 21 36 0 0 chr15 18386942 18386970 -82993551 + AT_rich Low_complexity Low_complexity 1 28 0 2105 121 17 10 chr15 18387060 18387358 -82993163 - AluSx SINE Alu -12 300 1 2304 92 0 19 chr15 18387847 18388162 -82992359 - AluSp SINE Alu -4 309 1 353 253 0 53 chr15 18388215 18388310 -82992211 + L1MC4 LINE L1 6614 6703 -1339 316 245 0 43 chr15 18388312 18388406 -82992115 - L1MC4 LINE L1 -1339 6703 6614 * 353 211 16 29 chr15 18388402 18388505 -82992016 + L1MC4 LINE L1 1995 6983 -1339 341 229 21 31 chr15 18388471 18388567 -82991954 - L1MC4 LINE L1 -1339 6703 6609 * 3202 163 94 0 chr15 18388585 18389246 -82991275 - L1MB7 LINE L1 -58 6126 5404 1818 149 28 33 chr15 18389308 18389670 -82990851 - MLT1A1 LTR MaLR 0 365 6 180 243 108 40 chr15 18389750 18389824 -82990697 - MIR SINE MIR 0 262 184 420 322 47 58 chr15 18390344 18390858 -82989663 - L2 LINE L2 -5 3267 2766 561 322 104 13 chr15 18390864 18391240 -82989281 + L1ME4a LINE L1 5709 6118 -3 23 0 0 0 chr15 18391344 18391367 -82989154 + AT_rich Low_complexity Low_complexity 1 23 0 2471 71 0 0 chr15 18391589 18391898 -82988623 - AluY SINE Alu -2 309 1 1325 135 70 4 chr15 18391917 18392147 -82988374 - L1PB4 LINE L1 -7 6149 5905 1563 183 8 80 chr15 18392475 18392875 -82987646 - MLT1A2 LTR MaLR 0 374 4 2080 98 0 86 chr15 18393494 18393821 -82986700 + AluSx SINE Alu 1 299 -13 535 138 0 0 chr15 18393944 18394031 -82986490 - L1MA3 LINE L1 0 6305 6219 421 275 219 0 chr15 18394092 18394270 -82986251 - L1ME LINE L1 -303 5818 5602 2363 98 0 3 chr15 18394404 18394710 -82985811 + AluSx SINE Alu 1 305 -7 775 269 142 19 chr15 18394715 18395651 -82984870 - L1ME LINE L1 -746 5400 4487 296 186 100 0 chr15 18395991 18396061 -82984460 + L1ME4a LINE L1 5527 5603 -518 276 221 235 0 chr15 18396071 18396207 -82984314 + L1ME4a LINE L1 5651 5818 -303 2209 109 3 6 chr15 18396207 18396518 -82984003 - AluSx SINE Alu -2 310 1 237 275 7 14 chr15 18396606 18396748 -82983773 + (TA)n Simple_repeat Simple_repeat 1 141 0 256 154 77 0 chr15 18396758 18396810 -82983711 + L1ME4a LINE L1 5994 6049 -72 21 82 0 0 chr15 18396812 18396861 -82983660 + AT_rich Low_complexity Low_complexity 1 49 0 29 47 0 0 chr15 18397212 18397255 -82983266 + AT_rich Low_complexity Low_complexity 1 43 0 236 216 0 20 chr15 18397294 18397345 -82983176 - L2 LINE L2 0 3313 3264 2156 124 0 0 chr15 18397345 18397643 -82982878 - AluSx SINE Alu -12 300 3 2151 132 0 0 chr15 18397921 18398225 -82982296 - AluSx SINE Alu -8 304 1 1469 173 118 7 chr15 18398334 18398606 -82981915 + AluJb SINE Alu 1 302 0 399 262 85 50 chr15 18398969 18399110 -82981411 + MIR SINE MIR 6 151 -111 1122 69 0 21 chr15 18399120 18399264 -82981257 + AluSq SINE Alu 153 293 -20 794 74 57 0 chr15 18400942 18401064 -82979457 - L1MA5 LINE L1 0 6300 6172 1253 144 0 0 chr15 18401102 18401283 -82979238 + AluJb SINE Alu 1 181 -131 1243 251 80 43 chr15 18401288 18402000 -82978521 - L1ME LINE L1 -1695 4451 3714 3518 104 28 4 chr15 18402209 18402708 -82977813 - MER9 LTR ERVK 0 511 1 23 0 0 0 chr15 18402993 18403016 -82977505 + AT_rich Low_complexity Low_complexity 1 23 0 2478 115 3 16 chr15 18403148 18403514 -82977007 - THE1B LTR MaLR -2 362 2 1265 181 96 22 chr15 18404121 18404392 -82976129 - AluJo SINE Alu -17 295 5 183 42 0 0 chr15 18406130 18406154 -82974367 + (TTTA)n Simple_repeat Simple_repeat 1 24 0 2202 77 18 3 chr15 18406682 18406968 -82973553 + AluY SINE Alu 1 290 -21 1091 133 0 76 chr15 18407261 18407471 -82973050 + AluSq SINE Alu 1 194 -119 2448 44 7 3 chr15 18408539 18408835 -82971686 - AluY SINE Alu -14 297 1 760 248 136 76 chr15 18410479 18410950 -82969571 + MLT1F1 LTR MaLR 67 565 -2 212 222 0 16 chr15 18411118 18411181 -82969340 + GA-rich Low_complexity Low_complexity 1 62 0 180 325 38 25 chr15 18411243 18411323 -82969198 - L2 LINE L2 0 3272 3192 637 246 182 0 chr15 18411746 18411933 -82968588 + MER58A DNA MER1_type 4 224 0 2273 109 3 0 chr15 18413838 18414142 -82966379 + AluSc SINE Alu 3 307 -2 374 278 94 11 chr15 18415161 18415352 -82965169 + L1ME3 LINE L1 774 980 -5090 349 312 136 4 chr15 18415445 18415916 -82964605 + L1ME3 LINE L1 1113 1645 -4616 276 266 43 60 chr15 18415961 18416243 -82964278 + L1ME3 LINE L1 3383 3659 -2421 26 50 0 0 chr15 18416530 18416570 -82963951 + AT_rich Low_complexity Low_complexity 1 40 0 2104 102 30 13 chr15 18416578 18416882 -82963639 + AluSg SINE Alu 1 309 -1 1548 262 50 56 chr15 18416980 18417523 -82962998 + L1ME3 LINE L1 5438 5978 -118 2265 111 0 0 chr15 18417523 18417820 -82962701 - AluSq SINE Alu -16 297 1 1548 262 50 56 chr15 18417820 18417939 -82962582 + L1ME3 LINE L1 5978 6096 0 522 266 92 14 chr15 18417974 18418192 -82962329 + L1ME3 LINE L1 5603 5837 -325 312 293 146 15 chr15 18418208 18418417 -82962104 + L1ME3 LINE L1 5910 6145 -19 1959 213 30 34 chr15 18418417 18418886 -82961635 - MLT1C LTR MaLR 0 467 1 312 293 146 15 chr15 18418886 18418908 -82961613 + L1ME3 LINE L1 6145 6163 -1 21 0 0 0 chr15 18419491 18419512 -82961009 + AT_rich Low_complexity Low_complexity 1 21 0 2580 68 0 0 chr15 18419525 18419835 -82960686 - AluY SINE Alu -1 310 1 2173 94 0 13 chr15 18420569 18420876 -82959645 + AluY SINE Alu 1 303 -8 2389 52 0 23 chr15 18421510 18421818 -82958703 - AluY SINE Alu -10 301 1 1906 63 20 4 chr15 18422743 18422995 -82957526 - AluY SINE Alu -10 301 46 1036 183 0 0 chr15 18424928 18425103 -82955418 - FRAM SINE Alu -2 174 1 1372 156 5 0 chr15 18425209 18425414 -82955107 + L1MC1 LINE L1 6122 6327 -6 1984 36 0 59 chr15 18426054 18426307 -82954214 - AluY SINE Alu -14 297 60 331 179 0 0 chr15 18426916 18426972 -82953549 + FLAM_A SINE Alu 58 113 -20 833 172 32 0 chr15 18426975 18427132 -82953389 - AluSq SINE Alu -20 293 132 1602 176 37 7 chr15 18427132 18427427 -82953094 + LTR15 LTR ERV1 184 487 -6 770 181 126 85 chr15 18427493 18427608 -82952913 + AluJb SINE Alu 2 111 -201 1517 157 13 47 chr15 18427608 18427908 -82952613 - AluSp SINE Alu -17 296 7 770 181 126 85 chr15 18427908 18428062 -82952459 + AluJb SINE Alu 111 282 -30 818 109 0 23 chr15 18428074 18428202 -82952319 - AluSp SINE Alu -188 125 1 541 184 74 84 chr15 18428231 18428350 -82952171 + AluJb SINE Alu 2 120 -192 1423 142 13 58 chr15 18428350 18428661 -82951860 - AluSp SINE Alu -16 297 1 541 184 74 84 chr15 18428661 18428731 -82951790 + AluJb SINE Alu 120 189 -123 1559 152 17 20 chr15 18428749 18429046 -82951475 - AluSp SINE Alu -17 296 1 885 84 15 0 chr15 18429054 18429185 -82951336 - AluSp SINE Alu -180 133 1 576 181 9 9 chr15 18429214 18429330 -82951191 + AluJb SINE Alu 2 117 -195 1677 132 9 60 chr15 18429331 18429649 -82950872 - AluSp SINE Alu -11 302 1 1206 171 6 99 chr15 18429676 18429787 -82950734 + AluJb SINE Alu 1 121 -191 1641 141 6 32 chr15 18429787 18430100 -82950421 - AluSp SINE Alu -8 305 1 1206 171 6 99 chr15 18430100 18430332 -82950189 + AluJb SINE Alu 121 312 0 184 226 113 0 chr15 18430586 18430639 -82949882 - MIR SINE MIR -93 169 111 497 171 83 138 chr15 18430955 18431178 -82949343 + L1MC5 LINE L1 7609 7810 -151 2133 141 0 0 chr15 18431178 18431491 -82949030 + AluSq SINE Alu 1 313 0 497 171 83 138 chr15 18431491 18431594 -82948927 + L1MC5 LINE L1 7810 7917 -44 1041 99 0 0 chr15 18431812 18431943 -82948578 - AluY SINE Alu -180 131 1 431 319 73 42 chr15 18433286 18433668 -82946853 - L1MCa LINE L1 -4673 1753 1224 257 314 57 51 chr15 18433686 18433900 -82946621 - L1MCa LINE L1 -5063 1353 1142 2418 84 7 0 chr15 18433900 18434208 -82946313 - AluSg SINE Alu 0 310 1 257 314 57 51 chr15 18434208 18434467 -82946054 - L1MCa LINE L1 -5274 1142 877 389 221 62 44 chr15 18434971 18435084 -82945437 - L1MCa LINE L1 -5954 462 348 193 274 333 10 chr15 18437128 18437230 -82943291 - L2 LINE L2 -5 3267 3133 418 243 52 66 chr15 18437679 18437967 -82942554 - L1MC5 LINE L1 -184 7777 7494 1052 178 57 105 chr15 18437972 18438130 -82942391 - MLT1B LTR MaLR 0 396 232 2501 82 0 3 chr15 18438130 18438436 -82942085 - AluY SINE Alu -6 305 1 1052 178 57 105 chr15 18438436 18438521 -82942000 - MLT1B LTR MaLR -164 232 144 2306 103 7 0 chr15 18438521 18438823 -82941698 - AluSp SINE Alu -5 308 5 1052 178 57 105 chr15 18438823 18438993 -82941528 - MLT1B LTR MaLR -252 144 4 309 286 109 11 chr15 18439000 18439175 -82941346 - L1MC5 LINE L1 -465 7496 7305 400 235 61 17 chr15 18439309 18439424 -82941097 - L1MC5 LINE L1 -735 7226 7107 303 314 36 6 chr15 18439605 18439764 -82940757 - L1MC3 LINE L1 -912 6873 6692 1930 169 3 3 chr15 18439796 18440097 -82940424 - AluJb SINE Alu -9 303 3 1603 200 225 25 chr15 18440723 18441234 -82939287 - MER90 LTR ERV1 0 614 2 1855 109 4 0 chr15 18441245 18441502 -82939019 - AluSg SINE Alu -52 258 1 634 212 90 59 chr15 18442098 18442320 -82938201 - L1MC5 LINE L1 -53 7908 7680 1749 191 48 18 chr15 18443112 18443504 -82937017 - L1MB4 LINE L1 0 6180 5777 1186 143 0 0 chr15 18443504 18443679 -82936842 - AluSg/x SINE Alu -17 293 119 22 0 0 0 chr15 18443679 18443701 -82936820 + AT_rich Low_complexity Low_complexity 1 22 0 2122 123 0 7 chr15 18443914 18444216 -82936305 - AluSx SINE Alu -12 300 1 948 86 0 14 chr15 18444386 18444525 -82935996 - AluY SINE Alu 0 311 175 740 81 0 0 chr15 18444626 18444725 -82935796 + AluY SINE Alu 209 307 -4 364 283 179 36 chr15 18444783 18445648 -82934873 - L1MEc LINE L1 -4579 1817 829 2914 223 76 14 chr15 18445670 18447027 -82933494 + L1ME1 LINE L1 4493 5922 -244 990 179 0 6 chr15 18447045 18447224 -82933297 + AluJb SINE Alu 131 308 -4 628 184 14 14 chr15 18447359 18447500 -82933021 + L1MA10 LINE L1 6192 6332 -2 2532 31 41 0 chr15 18448665 18448955 -82931566 + AluY SINE Alu 1 302 -9 2331 71 0 3 chr15 18449698 18450009 -82930512 + AluY SINE Alu 1 310 0 270 0 0 0 chr15 18450645 18450675 -82929846 + (GGGAA)n Simple_repeat Simple_repeat 5 34 0 2502 238 46 26 chr15 18450877 18451617 -82928904 - L1ME3A LINE L1 -9 6161 5407 184 342 179 5 chr15 18453233 18453423 -82927098 + L2 LINE L2 1824 2046 -1268 2698 42 0 0 chr15 18454107 18454418 -82926103 + AluY SINE Alu 1 311 0 242 308 0 47 chr15 18454739 18454846 -82925675 + MER5A DNA MER1_type 32 133 -56 386 231 146 15 chr15 18455096 18455226 -82925295 - MER103 DNA DNA -12 154 8 829 196 25 27 chr15 18456448 18456635 -82923886 + L1MC3 LINE L1 6196 6357 -2 265 236 307 21 chr15 18457275 18457415 -82923106 - L2 LINE L2 -20 3293 3114 1542 122 96 0 chr15 18457758 18457988 -82922533 - AluSx SINE Alu -12 300 49 7587 87 14 21 chr15 18457988 18459052 -82921469 + MER11C LTR ERVK 1 1057 -14 345 139 0 97 chr15 18459051 18459123 -82921398 - Alu SINE Alu -245 54 1 * 369 296 78 31 chr15 18459156 18459429 -82921092 - L1ME3 LINE L1 -206 5915 5650 295 271 125 20 chr15 18459486 18459729 -82920792 - L1ME3 LINE L1 -767 5395 5257 422 233 124 30 chr15 18459837 18459991 -82920530 + L1MC4a LINE L1 5722 5901 -1907 1360 175 26 63 chr15 18459991 18460294 -82920227 + AluJb SINE Alu 1 292 -20 422 233 124 30 chr15 18460294 18460341 -82920180 + L1MC4a LINE L1 5901 5942 -1866 902 131 24 42 chr15 18460342 18460510 -82920011 - AluSp SINE Alu -121 192 28 2454 157 47 19 chr15 18460511 18460983 -82919538 + LTR15 LTR ERV1 2 486 -7 258 108 0 0 chr15 18461014 18461051 -82919470 - AluSp SINE Alu -265 37 1 606 188 8 8 chr15 18461079 18461196 -82919325 + AluJo/FLAM SINE Alu 1 117 -185 1595 149 3 50 chr15 18461199 18461521 -82919000 - AluSp SINE Alu 0 313 7 835 227 133 43 chr15 18461556 18461669 -82918852 + AluJb SINE Alu 2 103 -209 1619 163 7 10 chr15 18461669 18461976 -82918545 - AluSp SINE Alu -7 306 1 835 227 133 43 chr15 18461976 18462118 -82918403 + AluJb SINE Alu 103 280 -32 1612 166 6 43 chr15 18462124 18462449 -82918072 - AluSp SINE Alu 0 313 1 1257 154 6 101 chr15 18462477 18462594 -82917927 + AluJb SINE Alu 1 128 -184 1690 162 0 29 chr15 18462594 18462902 -82917619 - AluSp SINE Alu -14 299 1 1257 154 6 101 chr15 18462902 18463129 -82917392 + AluJb SINE Alu 128 312 0 409 220 63 107 chr15 18463755 18463980 -82916541 + L1MC5 LINE L1 7609 7817 -144 2215 124 0 0 chr15 18463980 18464286 -82916235 + AluSq SINE Alu 1 306 -7 409 220 63 107 chr15 18464286 18464378 -82916143 + L1MC5 LINE L1 7817 7912 -49 1735 150 7 7 chr15 18465575 18465855 -82914666 + AluSx SINE Alu 1 280 -32 243 0 0 0 chr15 18465857 18465884 -82914637 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 1398 208 0 4 chr15 18465924 18466169 -82914352 + AluJo SINE Alu 1 244 -68 38 61 0 0 chr15 18466911 18466977 -82913544 + AT_rich Low_complexity Low_complexity 1 66 0 21 36 0 0 chr15 18467433 18467461 -82913060 + AT_rich Low_complexity Low_complexity 1 28 0 843 85 25 8 chr15 18467673 18467791 -82912730 - AluY SINE Alu -191 120 1 1564 65 0 10 chr15 18468032 18468231 -82912290 + AluY SINE Alu 111 307 -4 1690 197 37 8 chr15 18468253 18468608 -82911913 + MLT1A1 LTR MaLR 1 365 0 935 195 32 52 chr15 18468868 18469119 -82911402 + MLT1A1 LTR MaLR 120 365 0 266 211 0 0 chr15 18469142 18469194 -82911327 + FLAM SINE Alu 80 131 -2 2364 57 3 17 chr15 18469294 18469594 -82910927 + AluY SINE Alu 1 296 -15 31 26 0 0 chr15 18469741 18469779 -82910742 + AT_rich Low_complexity Low_complexity 1 38 0 2335 82 0 3 chr15 18469797 18470103 -82910418 - AluY SINE Alu -6 305 1 329 219 36 51 chr15 18470111 18470248 -82910273 + HAL1b LINE L1 1192 1326 -22 2132 96 0 60 chr15 18470924 18471238 -82909283 + AluY SINE Alu 3 297 -14 24 0 0 0 chr15 18471500 18471524 -82908997 + AT_rich Low_complexity Low_complexity 1 24 0 970 207 110 42 chr15 18472223 18472605 -82907916 - LTR37A LTR ERV1 0 426 19 218 122 0 41 chr15 18472883 18472932 -82907589 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 341 294 12 19 chr15 18474188 18474348 -82906173 + AluY SINE Alu 1 159 -142 3378 209 31 53 chr15 18474449 18474754 -82905767 + MER41-int LTR ERV1 1655 1965 -3981 387 0 0 0 chr15 18474754 18474797 -82905724 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 3378 209 31 53 chr15 18474797 18475363 -82905158 + MER41-int LTR ERV1 1965 2507 -3439 251 175 0 111 chr15 18475534 18475597 -82904924 - MER61E LTR ERV1 -415 154 99 334 263 13 0 chr15 18475600 18475676 -82904845 - LTR25 LTR ERV1 -438 356 280 8765 156 27 20 chr15 18475840 18477567 -82902954 - MER61E-int LTR ERV1 -3 6993 5281 2198 136 0 0 chr15 18477567 18477869 -82902652 - AluSg SINE Alu -8 302 1 8765 156 27 20 chr15 18477869 18477925 -82902596 - MER61E-int LTR ERV1 -1715 5281 2479 539 70 0 0 chr15 18478025 18478096 -82902425 + L1PA5 LINE L1 5875 5945 -209 1107 243 67 13 chr15 18478364 18478664 -82901857 - HERVL74 LTR ERVL -1834 3851 3536 979 270 61 0 chr15 18478675 18478953 -82901568 - HERVL74 LTR ERVL -2261 3424 3130 1595 239 28 3 chr15 18478954 18479309 -82901212 + MLT1A1 LTR MaLR 2 365 0 2639 212 16 12 chr15 18479313 18479875 -82900646 + MLT1A1-int LTR MaLR 4 567 -1168 228 67 0 0 chr15 18480044 18480074 -82900447 + (TTTC)n Simple_repeat Simple_repeat 3 32 0 1409 325 47 16 chr15 18480211 18480719 -82899802 - HERVL74 LTR ERVL -4748 937 414 971 176 16 21 chr15 18480765 18480952 -82899569 - MER61E LTR ERV1 -43 526 341 527 154 0 0 chr15 18481096 18481174 -82899347 + FRAM SINE Alu 68 145 -31 267 31 0 0 chr15 18481174 18481206 -82899315 + (GGAGAA)n Simple_repeat Simple_repeat 3 34 0 1437 249 57 73 chr15 18481221 18481726 -82898795 + MLT-int LTR MaLR 606 1102 -633 1700 208 46 3 chr15 18481729 18482056 -82898465 + MLT1A1 LTR MaLR 25 365 0 1141 219 8 4 chr15 18482058 18482295 -82898226 - HERVL74 LTR ERVL -3661 2024 1787 12769 167 60 63 chr15 18482413 18483860 -82896661 - LTR25-int LTR ERV1 -2207 4789 3793 2241 115 0 22 chr15 18483860 18484174 -82896347 + AluSc SINE Alu 1 307 -2 12769 167 60 63 chr15 18484174 18485848 -82894673 - LTR25-int LTR ERV1 -3203 3793 2116 3984 245 38 40 chr15 18485857 18487131 -82893390 - LTR25-int LTR ERV1 -5247 1749 479 992 237 95 53 chr15 18487284 18487437 -82893084 + LTR23-int LTR ERV1 998 1143 -4803 2179 62 7 56 chr15 18487437 18487773 -82892748 + AluY SINE Alu 1 311 0 992 237 95 53 chr15 18487773 18488311 -82892210 + LTR23-int LTR ERV1 1143 2375 -3571 2417 219 51 65 chr15 18488312 18488397 -82892124 + LTR23-int LTR ERV1 2259 2344 -2536 2017 104 0 0 chr15 18488397 18488657 -82891864 - AluSx SINE Alu -9 303 44 2417 219 51 65 chr15 18488657 18489493 -82891028 + LTR23-int LTR ERV1 2344 2888 -1992 1572 249 37 31 chr15 18489544 18489864 -82890657 + LTR23-int LTR ERV1 2239 2564 -2559 2683 33 0 0 chr15 18489864 18490165 -82890356 + AluY SINE Alu 1 301 -10 1572 249 37 31 chr15 18490165 18490325 -82890196 + LTR23-int LTR ERV1 2564 2722 -2401 678 332 56 23 chr15 18490521 18490952 -82889569 - L1M3c LINE L1 -5696 445 1 1405 279 166 14 chr15 18490983 18491717 -82888804 - L1ME1 LINE L1 -7 6159 5314 804 161 7 22 chr15 18491724 18491861 -82888660 - FRAM SINE Alu -19 157 23 774 223 58 22 chr15 18491899 18492173 -82888348 - L1ME1 LINE L1 -868 5278 4995 1291 231 77 12 chr15 18492186 18492615 -82887906 - L1ME1 LINE L1 -1328 4818 4362 3713 161 19 9 chr15 18492620 18493003 -82887518 - L1PB4 LINE L1 -2 6154 5761 396 0 0 0 chr15 18493003 18493047 -82887474 + (TA)n Simple_repeat Simple_repeat 2 45 0 3713 161 19 9 chr15 18493047 18493310 -82887211 - L1PB4 LINE L1 -395 5761 5502 2170 125 3 6 chr15 18493437 18493750 -82886771 + AluSx SINE Alu 1 312 0 471 270 138 6 chr15 18493837 18493996 -82886525 + L1MD3 LINE L1 6663 6842 -1153 2187 128 0 0 chr15 18494029 18494326 -82886195 + AluSx SINE Alu 1 297 -15 22 0 0 0 chr15 18494360 18494382 -82886139 + AT_rich Low_complexity Low_complexity 1 22 0 432 55 0 0 chr15 18494622 18494677 -82885844 + (TA)n Simple_repeat Simple_repeat 1 55 0 2178 118 3 0 chr15 18494698 18494994 -82885527 - AluSc SINE Alu -12 297 1 6093 144 16 40 chr15 18494994 18496779 -82883742 - L1MA3 LINE L1 -246 6059 4233 2317 110 0 0 chr15 18496779 18497088 -82883433 + AluSx SINE Alu 1 309 -3 6093 144 16 40 chr15 18497088 18497251 -82883270 - L1MA3 LINE L1 -2072 4233 4162 2189 133 13 0 chr15 18497251 18497559 -82882962 - AluSx SINE Alu 0 312 1 6093 144 16 40 chr15 18497559 18497598 -82882923 - L1MA3 LINE L1 -2143 4162 4124 5320 20 0 8 chr15 18497605 18498213 -82882308 - L1PA2 LINE L1 0 6155 5553 2702 29 0 0 chr15 18498213 18498527 -82881994 + L1P LINE L1 4781 5094 -1052 1149 91 0 0 chr15 18498627 18498770 -82881751 - AluY SINE Alu -168 143 1 771 261 147 12 chr15 18498770 18499104 -82881417 - L1M4 LINE L1 -938 5208 4830 331 130 0 0 chr15 18499130 18499184 -82881337 - L1MA5A LINE L1 -2 6295 6242 2029 142 3 3 chr15 18499184 18499493 -82881028 - AluSx SINE Alu -3 309 1 1982 129 3 29 chr15 18499507 18499818 -82880703 - AluJb SINE Alu -9 303 1 572 116 30 2 chr15 18499818 18499914 -82880607 - L1MC/D LINE L1 -672 5625 5520 423 138 0 0 chr15 18499969 18500034 -82880487 + L1MA5A LINE L1 6183 6247 -50 771 192 8 0 chr15 18500043 18500173 -82880348 - AluSg/x SINE Alu -49 263 133 2175 109 0 3 chr15 18500173 18500487 -82880034 - AluSx SINE Alu 0 313 1 2299 82 7 0 chr15 18500509 18500827 -82879694 - AluSg SINE Alu 0 320 1 2064 98 47 0 chr15 18501363 18501638 -82878883 + AluSx SINE Alu 13 300 -12 404 234 76 21 chr15 18503136 18503281 -82877240 - MIR SINE MIR -109 153 1 389 287 17 17 chr15 18503534 18503649 -82876872 - L1ME LINE L1 -441 5680 5566 2176 117 27 3 chr15 18503725 18504024 -82876497 - AluSx SINE Alu -6 306 1 1879 136 3 81 chr15 18504031 18504232 -82876289 - AluJo SINE Alu 0 312 146 2227 101 3 7 chr15 18504232 18504540 -82875981 - AluSg SINE Alu -3 307 1 1879 136 3 81 chr15 18504540 18504670 -82875851 - AluJo SINE Alu -166 146 7 236 88 0 0 chr15 18504881 18504915 -82875606 - Alu SINE Alu -265 34 1 780 229 28 0 chr15 18505022 18505201 -82875320 + MER5A DNA MER1_type 6 189 0 2223 118 0 7 chr15 18505518 18505822 -82874699 - AluSg SINE Alu -8 302 1 338 213 53 0 chr15 18505824 18505918 -82874603 - MIR SINE MIR -147 115 17 1954 143 0 17 chr15 18506924 18507225 -82873296 + AluJb SINE Alu 1 296 -16 1338 147 117 57 chr15 18507588 18507734 -82872787 + AluJo SINE Alu 1 137 -175 2227 109 24 0 chr15 18507734 18508028 -82872493 + AluSg SINE Alu 1 301 -9 1338 147 117 57 chr15 18508028 18508146 -82872375 + AluJo SINE Alu 137 281 -31 200 83 0 28 chr15 18508147 18508183 -82872338 + (GGAA)n Simple_repeat Simple_repeat 1 35 0 1942 140 11 49 chr15 18508293 18508642 -82871879 - MER1B DNA MER1_type 0 337 2 986 188 28 0 chr15 18509366 18509542 -82870979 + FRAM SINE Alu 1 176 0 539 181 0 38 chr15 18509551 18509711 -82870810 + GA-rich Low_complexity Low_complexity 3 156 0 232 190 210 30 chr15 18509994 18510094 -82870427 + MLT1K LTR MaLR 125 242 -346 242 286 8 48 chr15 18510253 18510379 -82870142 + MLT1K LTR MaLR 457 577 -11 2321 129 0 0 chr15 18511459 18511770 -82868751 - AluSx SINE Alu -1 311 1 1509 169 12 0 chr15 18511878 18512132 -82868389 + AluJb SINE Alu 51 307 -5 1824 155 54 0 chr15 18512208 18512486 -82868035 + AluJo SINE Alu 3 295 -17 334 230 0 46 chr15 18512577 18512664 -82867857 + MLT1F1 LTR MaLR 62 144 -449 2784 84 0 0 chr15 18512691 18513046 -82867475 - THE1A LTR MaLR 0 355 1 445 276 125 0 chr15 18513051 18513203 -82867318 + MLT1F1 LTR MaLR 121 291 -276 1174 93 0 13 chr15 18513204 18513354 -82867167 + AluSq/x SINE Alu 2 149 -164 213 39 0 0 chr15 18513376 18513402 -82867119 + (A)n Simple_repeat Simple_repeat 1 26 0 864 209 141 30 chr15 18513402 18513665 -82866856 + MLT1F1 LTR MaLR 276 567 0 251 289 0 48 chr15 18513673 18513756 -82866765 - MLT1J LTR MaLR -431 80 2 542 159 23 15 chr15 18513839 18513971 -82866550 + CT-rich Low_complexity Low_complexity 3 135 0 809 146 23 15 chr15 18513985 18514115 -82866406 - FLAM_C SINE Alu -2 131 1 3395 155 11 14 chr15 18514151 18514713 -82865808 + LTR31 LTR ERV1 60 619 0 208 259 24 35 chr15 18514720 18514805 -82865716 + MIR SINE MIR 156 239 -23 221 0 35 0 chr15 18514827 18514856 -82865665 + (TTA)n Simple_repeat Simple_repeat 2 31 0 958 104 0 15 chr15 18514856 18514984 -82865537 - AluSp SINE Alu -185 128 1 2260 97 33 0 chr15 18515166 18515465 -82865056 - AluSx SINE Alu -1 311 3 1879 112 15 8 chr15 18515748 18516015 -82864506 + AluSx SINE Alu 33 301 -11 2298 121 0 3 chr15 18516616 18516929 -82863592 + AluSx SINE Alu 1 312 0 2051 122 28 0 chr15 18516997 18517283 -82863238 + AluSx SINE Alu 1 294 -18 1042 169 0 17 chr15 18517567 18517739 -82862782 + FAM SINE Alu 1 169 -6 1776 190 0 3 chr15 18517801 18518112 -82862409 + AluJo SINE Alu 1 310 -2 209 195 0 0 chr15 18518187 18518228 -82862293 + (TG)n Simple_repeat Simple_repeat 1 41 0 2382 103 0 25 chr15 18518294 18518614 -82861907 + AluSx SINE Alu 1 312 0 201 216 39 0 chr15 18518918 18518969 -82861552 + MIR SINE MIR 95 147 -61 390 42 0 0 chr15 18519105 18519153 -82861368 + (TTTTC)n Simple_repeat Simple_repeat 3 50 0 1837 133 0 86 chr15 18520050 18520374 -82860147 + AluSx SINE Alu 2 297 -15 321 235 144 15 chr15 18520387 18520547 -82859974 + MIR SINE MIR 45 231 -31 1025 155 0 0 chr15 18521319 18521474 -82859047 + 7SLRNA srpRNA srpRNA 95 249 -71 261 57 0 0 chr15 18522615 18522650 -82857871 + (TGGGGG)n Simple_repeat Simple_repeat 6 40 0 1007 162 133 54 chr15 18525203 18525444 -82855077 - MER61E-int LTR ERV1 -6707 289 30 618 212 109 2 chr15 18525484 18525654 -82854867 - MER61E LTR ERV1 -20 774 342 786 191 114 36 chr15 18525859 18526184 -82854337 - MSTD LTR MaLR -8 420 1 2234 241 47 2 chr15 18526184 18526674 -82853847 - MSTD-int LTR MaLR 0 1735 1224 2047 167 36 44 chr15 18526676 18527237 -82853284 - LTR35 LTR ERV1 0 618 1 392 166 69 97 chr15 18527663 18527808 -82852713 - LTR35-int LTR ERV1 -277 6054 5914 2727 227 42 8 chr15 18527828 18528490 -82852031 - LTR35-int LTR ERV1 -541 5790 5106 1027 128 7 0 chr15 18528504 18528652 -82851869 + MER41B LTR ERV1 305 453 -182 1437 136 0 5 chr15 18528652 18528866 -82851655 + AluSq SINE Alu 82 294 -19 608 81 50 20 chr15 18528866 18528965 -82851556 + MER41B LTR ERV1 448 549 -86 741 156 151 63 chr15 18528974 18529212 -82851309 - LTR35-int LTR ERV1 -3553 4567 4309 * 2510 214 104 46 chr15 18529199 18529489 -82851032 - LTR35-int LTR ERV1 -2242 3704 3432 2044 119 31 0 chr15 18529489 18529775 -82850746 - AluSx SINE Alu -17 295 1 2510 214 104 46 chr15 18529775 18529803 -82850718 - LTR35-int LTR ERV1 -2514 3432 3407 1527 134 25 0 chr15 18529803 18530041 -82850480 - L1PA15 LINE L1 -8 6157 5914 2510 214 104 46 chr15 18530041 18530830 -82849691 - LTR35-int LTR ERV1 -2539 3407 979 1029 133 0 0 chr15 18531000 18531143 -82849378 + AluSg/x SINE Alu 155 297 -13 2307 105 3 6 chr15 18531147 18531461 -82849060 + AluSp SINE Alu 1 313 0 2053 125 3 3 chr15 18531619 18531915 -82848606 - AluSx SINE Alu -16 296 1 1374 152 18 5 chr15 18532142 18532366 -82848155 + AluJb SINE Alu 1 227 -85 2089 93 0 0 chr15 18532373 18532641 -82847880 - AluSx SINE Alu -44 268 1 330 322 17 8 chr15 18533167 18533285 -82847236 + CT-rich Low_complexity Low_complexity 3 121 0 1874 133 0 73 chr15 18534347 18534677 -82845844 - AluSg SINE Alu -4 306 1 2071 127 3 0 chr15 18534900 18535192 -82845329 - AluSx SINE Alu -19 293 1 2153 132 0 0 chr15 18535566 18535876 -82844645 - AluSg SINE Alu 0 310 1 2198 258 96 10 chr15 18535881 18536661 -82843860 - L1ME1 LINE L1 0 6166 5320 2018 172 120 2 chr15 18536734 18537159 -82843362 - LTR53 LTR ERVL -40 479 5 608 209 16 44 chr15 18537204 18537386 -82843135 - L1MDa LINE L1 -4821 1719 1543 412 212 117 51 chr15 18537390 18537527 -82842994 + MER21B LTR ERV1 661 806 -57 2176 127 3 3 chr15 18538100 18538408 -82842113 - AluY SINE Alu -3 308 1 445 306 122 3 chr15 18540949 18541243 -82839278 - L1ME3 LINE L1 -110 6052 5724 1811 163 13 3 chr15 18541243 18541550 -82838971 - AluJo SINE Alu 0 312 3 500 265 66 24 chr15 18541656 18541822 -82838699 + MLT1G LTR MaLR 73 245 -345 2654 45 0 0 chr15 18541826 18542137 -82838384 + AluY SINE Alu 1 311 0 595 264 97 33 chr15 18542457 18542726 -82837795 - MLT1E2 LTR MaLR -341 285 1 295 275 88 0 chr15 18542757 18542848 -82837673 - L2 LINE L2 -20 3252 3154 698 102 0 10 chr15 18543186 18543328 -82837193 + AluSp/q SINE Alu 192 313 0 21 0 0 0 chr15 18543541 18543562 -82836959 + AT_rich Low_complexity Low_complexity 1 21 0 24 0 0 0 chr15 18543967 18543991 -82836530 + AT_rich Low_complexity Low_complexity 1 24 0 310 305 114 38 chr15 18544088 18544324 -82836197 + L1M4 LINE L1 3620 3873 -2273 1676 226 9 6 chr15 18544351 18544700 -82835821 + MLT1A1 LTR MaLR 1 350 -15 464 111 0 67 chr15 18544861 18544951 -82835570 + L1PA8 LINE L1 6083 6166 -6 2211 160 52 5 chr15 18545608 18546015 -82834506 - MSTB LTR MaLR 0 426 1 186 284 0 0 chr15 18546264 18546345 -82834176 + A-rich Low_complexity Low_complexity 5 85 0 2380 75 0 31 chr15 18546508 18546828 -82833693 + AluY SINE Alu 1 310 -1 22 0 0 0 chr15 18546971 18546993 -82833528 + AT_rich Low_complexity Low_complexity 1 22 0 2486 59 0 7 chr15 18547066 18547369 -82833152 - AluY SINE Alu -10 301 1 292 85 6 0 chr15 18547922 18547971 -82832550 - MLT2C1 LTR ERVL -4 410 349 797 246 20 0 chr15 18548539 18548738 -82831783 + L1MC4 LINE L1 7337 7539 -503 310 227 38 8 chr15 18548738 18548870 -82831651 + GA-rich Low_complexity Low_complexity 4 139 0 613 184 101 77 chr15 18548926 18549038 -82831483 + L1MC4 LINE L1 7593 7714 -328 2394 57 0 41 chr15 18549038 18549352 -82831169 - AluY SINE Alu -10 301 1 613 184 101 77 chr15 18549352 18549446 -82831075 + L1MC4 LINE L1 7714 7804 -238 186 143 0 0 chr15 18549488 18549523 -82830998 + (TA)n Simple_repeat Simple_repeat 2 36 0 947 190 22 66 chr15 18549558 18549784 -82830737 - MER20 DNA MER1_type 0 219 4 770 306 39 11 chr15 18549825 18550184 -82830337 + L1MEc LINE L1 1601 1969 -4427 1433 195 66 10 chr15 18550219 18550521 -82830000 - L1MC1 LINE L1 0 6333 6015 801 287 10 10 chr15 18550862 18551162 -82829359 + L1MEc LINE L1 2209 2508 -3707 1279 262 51 8 chr15 18551253 18551760 -82828761 + L1MEc LINE L1 2506 3034 -3181 * 3011 116 57 116 chr15 18551740 18551869 -82828652 + L1MA5A LINE L1 5658 5793 -504 1819 128 79 0 chr15 18551869 18552135 -82828386 + AluSx SINE Alu 1 287 -25 3011 116 57 116 chr15 18552135 18552685 -82827836 + L1MA5A LINE L1 5793 6297 0 239 278 221 0 chr15 18552800 18553099 -82827422 + L1MEc LINE L1 3164 3528 -2687 299 214 14 0 chr15 18553113 18553183 -82827338 - L1 LINE L1 -2743 3403 3333 705 215 11 6 chr15 18553189 18553366 -82827155 + L1 LINE L1 2894 3071 -3075 22 0 0 0 chr15 18556774 18556796 -82823725 + GC_rich Low_complexity Low_complexity 1 22 0 1698 221 30 24 chr15 18557152 18557583 -82822938 + L1 LINE L1 3062 3498 -2648 2233 71 0 39 chr15 18557583 18557891 -82822630 + AluY SINE Alu 1 296 -15 1698 221 30 24 chr15 18557891 18557966 -82822555 + L1 LINE L1 3498 3571 -2575 1146 170 21 21 chr15 18557981 18558175 -82822346 - AluJo SINE Alu -115 197 4 662 44 11 0 chr15 18558187 18558277 -82822244 + (TA)n Simple_repeat Simple_repeat 1 91 0 2161 128 3 0 chr15 18558278 18558575 -82821946 - AluSx SINE Alu -14 298 1 2259 110 3 0 chr15 18559110 18559410 -82821111 - AluY SINE Alu -10 301 1 1730 74 4 81 chr15 18559661 18559932 -82820589 - AluY SINE Alu -2 309 60 368 143 0 0 chr15 18560557 18560613 -82819908 + AluJb SINE Alu 59 114 -188 760 205 13 0 chr15 18560628 18560784 -82819737 - AluSp SINE Alu -24 289 132 1691 172 17 7 chr15 18560788 18561085 -82819436 + LTR15 LTR ERV1 188 487 -6 733 189 18 79 chr15 18561151 18561270 -82819251 + AluJb SINE Alu 2 102 -210 1744 173 0 0 chr15 18561270 18561570 -82818951 - AluSp SINE Alu -13 300 1 733 189 18 79 chr15 18561570 18561678 -82818843 + AluJb SINE Alu 102 215 -97 257 88 0 0 chr15 18561681 18561715 -82818806 + AluJb SINE Alu 84 117 -185 691 142 0 25 chr15 18561742 18561862 -82818659 - AluSp SINE Alu -194 119 3 584 170 18 9 chr15 18561893 18562005 -82818516 + AluJb SINE Alu 2 114 -198 934 161 11 0 chr15 18562007 18562181 -82818340 - AluSp SINE Alu -16 297 122 391 141 0 0 chr15 18562316 18562380 -82818141 - AluJ/FLAM SINE Alu -238 64 1 558 239 114 10 chr15 18562380 18562581 -82817940 - L1 LINE L1 -3250 2896 2675 302 202 53 26 chr15 18562581 18562673 -82817848 + (TATATG)n Simple_repeat Simple_repeat 4 101 -19 2074 84 0 18 chr15 18562673 18562948 -82817573 + AluY SINE Alu 31 300 -11 302 202 53 26 chr15 18562948 18562969 -82817552 + (TATATG)n Simple_repeat Simple_repeat 101 120 0 2345 71 0 49 chr15 18562969 18563277 -82817244 + AluY SINE Alu 1 293 -18 320 238 133 0 chr15 18563279 18563384 -82817137 - L1 LINE L1 -3460 2686 2568 1322 106 106 0 chr15 18564354 18564562 -82815959 + MER30 DNA MER1_type 1 230 0 1653 142 92 0 chr15 18565545 18565806 -82814715 - AluJb SINE Alu -19 293 9 985 266 136 26 chr15 18566818 18567107 -82813414 - L1ME2 LINE L1 -112 6052 5796 1856 162 10 3 chr15 18567107 18567415 -82813106 - AluJb SINE Alu 0 312 3 985 266 136 26 chr15 18567415 18567624 -82812897 - L1ME2 LINE L1 -368 5796 5499 2228 125 3 0 chr15 18568163 18568475 -82812046 - AluSp SINE Alu 0 313 1 2146 136 0 0 chr15 18568495 18568797 -82811724 - AluSx SINE Alu -10 302 1 208 100 0 143 chr15 18569556 18569626 -82810895 + (GGGTG)n Simple_repeat Simple_repeat 4 63 0 257 203 51 38 chr15 18570334 18570413 -82810108 + Charlie5 DNA MER1_type 45 124 -2488 * 1079 253 3 7 chr15 18570411 18570704 -82809817 + Charlie5 DNA MER1_type 2238 2529 -83 500 152 0 13 chr15 18570704 18570783 -82809738 - AluSg/x SINE Alu -18 291 214 470 233 33 0 chr15 18570884 18571004 -82809517 + MIR3 SINE MIR 51 174 -34 533 62 0 25 chr15 18571378 18571459 -82809062 + Alu SINE Alu 232 310 -2 1606 121 159 8 chr15 18572076 18572333 -82808188 - AluSx SINE Alu -5 297 2 201 74 0 0 chr15 18572360 18572387 -82808134 + (T)n Simple_repeat Simple_repeat 1 27 0 453 306 2 4 chr15 18572761 18573285 -82807236 + CT-rich Low_complexity Low_complexity 1 523 0 421 299 0 0 chr15 18573313 18573635 -82806886 + CT-rich Low_complexity Low_complexity 1 322 0 427 294 0 22 chr15 18573704 18573888 -82806633 + CT-rich Low_complexity Low_complexity 1 180 0 486 314 1 17 chr15 18573960 18574572 -82805949 + CT-rich Low_complexity Low_complexity 1 602 0 234 279 15 0 chr15 18575180 18575248 -82805273 - MIR SINE MIR -87 121 53 1181 117 17 22 chr15 18575587 18575766 -82804755 - AluSp SINE Alu 0 313 136 529 260 157 20 chr15 18575901 18576105 -82804416 - MIR SINE MIR -10 252 21 261 83 0 0 chr15 18576299 18576335 -82804186 + (CA)n Simple_repeat Simple_repeat 2 37 0 287 261 67 25 chr15 18577726 18577845 -82802676 - L2 LINE L2 -3 3310 3187 196 282 176 0 chr15 18577842 18577927 -82802594 - MIR3 SINE MIR 0 208 109 * 351 293 64 29 chr15 18577985 18578125 -82802396 - MIR SINE MIR -70 192 48 711 92 0 0 chr15 18580620 18580707 -82799814 + AluS SINE Alu 1 87 -226 2478 77 0 0 chr15 18580822 18581120 -82799401 + AluSg SINE Alu 1 298 -12 2165 107 0 13 chr15 18581370 18581678 -82798843 - AluSc SINE Alu -5 304 1 474 253 60 53 chr15 18581768 18582053 -82798468 - L1M4 LINE L1 -2186 3960 3674 2501 63 0 3 chr15 18582059 18582360 -82798161 - AluY SINE Alu -11 300 1 201 241 35 0 chr15 18582565 18582623 -82797898 + (TA)n Simple_repeat Simple_repeat 2 61 0 926 10 0 0 chr15 18583291 18583395 -82797126 - AluYa5/8 SINE Alu -3 307 204 2493 58 0 0 chr15 18583397 18583691 -82796830 - AluY SINE Alu -17 294 1 1541 39 6 0 chr15 18583794 18583972 -82796549 - AluY SINE Alu -132 179 1 1185 15 0 0 chr15 18584010 18584143 -82796378 + AluY SINE Alu 176 308 -3 2501 39 0 0 chr15 18585517 18585823 -82794698 - AluY SINE Alu 0 306 1 659 281 35 5 chr15 18586173 18586372 -82794149 + MIR SINE MIR 10 214 -48 1518 92 5 0 chr15 18586736 18586943 -82793578 - L1MA3 LINE L1 0 6305 6098 2374 69 0 13 chr15 18587180 18587486 -82793035 - AluY SINE Alu -9 302 1 27 49 0 0 chr15 18587953 18587994 -82792527 + AT_rich Low_complexity Low_complexity 1 41 0 2427 66 0 0 chr15 18588266 18588569 -82791952 - AluY SINE Alu -8 303 1 237 339 16 8 chr15 18589034 18589161 -82791360 - L2 LINE L2 -2375 939 812 211 262 262 21 chr15 18589385 18589530 -82790991 + MIR SINE MIR 53 232 -30 1752 115 11 11 chr15 18592177 18592437 -82788084 - THE1C LTR MaLR 0 375 116 26 0 0 0 chr15 18592446 18592472 -82788049 + AT_rich Low_complexity Low_complexity 1 26 0 1052 186 67 0 chr15 18592497 18592690 -82787831 - MER2 DNA MER2_type -139 206 1 2614 49 0 7 chr15 18594281 18594586 -82785935 - AluY SINE Alu -6 305 3 2218 66 3 24 chr15 18594795 18595112 -82785409 - AluY SINE Alu 0 311 1 446 314 115 57 chr15 18595393 18595951 -82784570 + L2 LINE L2 1602 2191 -1123 647 200 123 0 chr15 18596049 18596204 -82784317 + MER58B DNA MER1_type 167 340 -1 302 254 109 52 chr15 18596769 18596962 -82783559 - L1MC4a LINE L1 -1932 5876 5673 28 0 0 0 chr15 18597246 18597274 -82783247 + AT_rich Low_complexity Low_complexity 1 28 0 1914 257 89 6 chr15 18597959 18598590 -82781931 + L1 LINE L1 2046 2726 -3420 662 212 155 21 chr15 18598630 18598745 -82781776 + AluJb SINE Alu 2 100 -212 1521 139 56 21 chr15 18598745 18598913 -82781608 - AluSp SINE Alu -5 298 114 270 0 0 0 chr15 18598913 18598943 -82781578 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1521 139 56 21 chr15 18598943 18599061 -82781460 - AluSp SINE Alu -189 114 2 662 212 155 21 chr15 18599061 18599138 -82781383 + AluJb SINE Alu 100 220 -92 1292 142 88 61 chr15 18599169 18599465 -82781056 - AluSp SINE Alu -9 304 1 904 260 94 76 chr15 18600185 18600408 -82780113 - L1ME3A LINE L1 -6 6164 5946 2160 96 3 7 chr15 18600408 18600701 -82779820 - AluSc SINE Alu -17 292 1 904 260 94 76 chr15 18600701 18601050 -82779471 - L1ME3A LINE L1 -224 5946 5576 2482 48 3 35 chr15 18601050 18601360 -82779161 + AluY SINE Alu 1 300 -11 904 260 94 76 chr15 18601360 18601470 -82779051 - L1ME3A LINE L1 -594 5576 5469 1845 234 68 12 chr15 18601475 18601958 -82778563 - MLT2B1 LTR ERVL -10 510 1 2813 233 46 25 chr15 18601961 18602856 -82777665 - ERVL LTR ERVL -3 5651 4773 1562 226 122 88 chr15 18602891 18603611 -82776910 - LTR1B LTR ERV1 -81 745 1 18794 201 34 18 chr15 18603611 18605711 -82774810 - ERVL LTR ERVL -949 4815 2623 1225 167 14 14 chr15 18605711 18605921 -82774600 + MER6B DNA MER2_type 1 210 0 18794 201 34 18 chr15 18605921 18607578 -82772943 - ERVL LTR ERVL -3141 2623 995 367 214 51 31 chr15 18607579 18607645 -82772876 + MER4-int LTR ERV1 351 421 -7699 314 61 20 0 chr15 18607645 18607694 -82772827 + (TG)n Simple_repeat Simple_repeat 1 50 0 367 214 51 31 chr15 18607694 18607725 -82772796 + MER4-int LTR ERV1 421 450 -7670 6925 153 58 35 chr15 18607798 18609179 -82771342 + MER4-int LTR ERV1 451 1863 -6257 815 182 25 106 chr15 18609194 18609384 -82771137 + MER4-int LTR ERV1 2346 2550 -4048 2433 64 0 0 chr15 18609384 18609681 -82770840 - AluY SINE Alu -14 297 1 815 182 25 106 chr15 18609681 18609859 -82770662 + MER4-int LTR ERV1 2550 3710 -2888 1893 150 40 52 chr15 18609869 18610216 -82770305 + MER61A LTR ERV1 1 343 0 263 245 41 31 chr15 18610218 18610316 -82770205 + MER61A-int LTR ERV1 3 101 -5116 1409 118 78 108 chr15 18610536 18610694 -82769827 + MER61A-int LTR ERV1 246 390 -4827 2391 76 0 19 chr15 18610694 18611011 -82769510 - AluY SINE Alu 0 311 1 1409 118 78 108 chr15 18611011 18611184 -82769337 + MER61A-int LTR ERV1 390 567 -4650 * 4325 88 13 8 chr15 18611164 18611788 -82768733 + MER61A-int LTR ERV1 1396 2022 -3195 * 7842 72 18 4 chr15 18611777 18612804 -82767717 + MER61A-int LTR ERV1 2948 3988 -1229 1710 227 25 19 chr15 18612804 18613289 -82767232 - L1 LINE L1 -2441 3705 3218 2762 188 69 21 chr15 18613289 18613368 -82767153 + MER4-int LTR ERV1 4962 5036 -3084 2344 87 0 7 chr15 18613368 18613667 -82766854 - AluSg SINE Alu -13 297 1 2762 188 69 21 chr15 18613667 18614214 -82766307 + MER4-int LTR ERV1 5036 5618 -2502 2559 71 0 0 chr15 18614223 18614534 -82765987 - AluY SINE Alu 0 311 1 3404 175 38 12 chr15 18614541 18615140 -82765381 + MER4-int LTR ERV1 3116 3730 -3028 256 184 0 0 chr15 18615134 18615183 -82765338 + MER4-int LTR ERV1 1114 1162 -5436 * 279 233 27 0 chr15 18615184 18615257 -82765264 + (TA)n Simple_repeat Simple_repeat 1 75 0 4535 157 104 68 chr15 18615262 18616242 -82764279 + MER4-int LTR ERV1 6631 7645 -475 235 143 0 71 chr15 18616242 18616284 -82764237 + LOR1b LTR ERV1 395 433 -28 1135 277 58 27 chr15 18616285 18616461 -82764060 - HERVL-B1 LTR ERVL -5185 469 300 1859 149 5 115 chr15 18616461 18616851 -82763670 - MER7A DNA MER2_type -1 345 1 1135 277 58 27 chr15 18616851 18617125 -82763396 - HERVL-B1 LTR ERVL -5354 300 5 231 118 0 0 chr15 18617125 18617159 -82763362 - MLT2B1 LTR ERVL -6 509 476 571 66 0 22 chr15 18617159 18617250 -82763271 + (TAGA)n Simple_repeat Simple_repeat 2 90 0 967 252 110 3 chr15 18617252 18617569 -82762952 - MLT2B1 LTR ERVL -169 351 1 383 276 119 4 chr15 18617572 18617949 -82762572 - L1ME LINE L1 -688 5474 5043 1578 239 76 62 chr15 18618202 18618541 -82761980 + L1MEc LINE L1 2172 2505 -3710 2938 32 3 12 chr15 18618541 18618880 -82761641 - L1PA4 LINE L1 0 6155 5820 1578 239 76 62 chr15 18618880 18619299 -82761222 + L1MEc LINE L1 2505 2894 -3321 21 36 0 0 chr15 18620142 18620170 -82760351 + AT_rich Low_complexity Low_complexity 1 28 0 43 56 0 0 chr15 18620627 18620698 -82759823 + AT_rich Low_complexity Low_complexity 1 71 0 1306 208 0 4 chr15 18621439 18621684 -82758837 - AluJo SINE Alu -68 244 1 222 37 0 0 chr15 18621724 18621751 -82758770 + (TTTTG)n Simple_repeat Simple_repeat 2 28 0 1657 150 7 7 chr15 18621754 18622034 -82758487 - AluSx SINE Alu -32 280 1 433 318 112 52 chr15 18622258 18622544 -82757977 - L1ME4a LINE L1 -198 5923 5621 413 191 75 125 chr15 18623201 18623301 -82757220 - L1MC5 LINE L1 -49 7912 7809 2039 135 0 6 chr15 18623301 18623613 -82756908 - AluSq SINE Alu -3 310 1 413 191 75 125 chr15 18623613 18623832 -82756689 - L1MC5 LINE L1 -152 7809 7609 1298 173 12 80 chr15 18624453 18624665 -82755856 - AluJb SINE Alu 0 302 118 1568 149 7 23 chr15 18624665 18624973 -82755548 + AluSp SINE Alu 1 303 -10 1298 173 12 80 chr15 18624973 18625084 -82755437 - AluJb SINE Alu -184 118 1 1608 131 13 33 chr15 18625111 18625417 -82755104 + AluSp SINE Alu 1 300 -13 577 179 8 8 chr15 18625424 18625541 -82754980 - FLAM_C SINE Alu -16 117 1 836 105 8 8 chr15 18625569 18625702 -82754819 + AluSp SINE Alu 1 133 -180 1534 157 9 46 chr15 18625708 18626032 -82754489 + AluSp SINE Alu 1 312 -1 392 125 16 0 chr15 18626034 18626098 -82754423 - AluJb SINE Alu -186 116 52 1514 157 3 35 chr15 18626124 18626437 -82754084 + AluSp SINE Alu 1 303 -10 545 207 9 9 chr15 18626438 18626554 -82753967 - AluJb SINE Alu -195 117 2 1428 183 29 7 chr15 18626620 18626893 -82753628 - LTR15 LTR ERV1 -6 487 209 27 0 0 0 chr15 18627628 18627655 -82752866 + AT_rich Low_complexity Low_complexity 1 27 0 208 233 11 111 chr15 18628229 18628319 -82752202 - L2 LINE L2 -2 3270 3190 1399 180 36 46 chr15 18630038 18630344 -82750177 + AluJo SINE Alu 1 303 -9 24 32 0 0 chr15 18630610 18630641 -82749880 + AT_rich Low_complexity Low_complexity 1 31 0 200 206 0 0 chr15 18630841 18630875 -82749646 + polypurine Low_complexity Low_complexity 3 36 0 2062 116 0 0 chr15 18631539 18631833 -82748688 + AluSq SINE Alu 2 295 -18 228 313 102 16 chr15 18631992 18632120 -82748401 - MIR SINE MIR -13 249 111 1581 100 129 30 chr15 18632294 18632565 -82747956 + AluSg SINE Alu 1 298 -12 3795 212 36 42 chr15 18634155 18635133 -82745388 - L1ME1 LINE L1 -5 6161 5198 2233 85 0 7 chr15 18635133 18635439 -82745082 - AluSg SINE Alu -6 304 1 3795 212 36 42 chr15 18635439 18635690 -82744831 - L1ME1 LINE L1 -968 5198 4947 365 100 0 17 chr15 18635718 18635778 -82744743 + (TCCC)n Simple_repeat Simple_repeat 3 61 0 1708 147 20 14 chr15 18635778 18636070 -82744451 - AluJo SINE Alu -18 294 1 459 255 57 14 chr15 18637890 18638031 -82742490 + MIR SINE MIR 50 196 -66 315 49 0 0 chr15 18639167 18639208 -82741313 + (TG)n Simple_repeat Simple_repeat 1 41 0 600 137 0 20 chr15 18639728 18639830 -82740691 + FLAM_A SINE Alu 43 142 0 1738 163 17 0 chr15 18640160 18640460 -82740061 + AluJb SINE Alu 1 305 -7 264 217 87 0 chr15 18640460 18640529 -82739992 + MIR SINE MIR 162 236 -26 1714 149 11 3 chr15 18640706 18640988 -82739533 + AluJb SINE Alu 9 292 -20 225 228 0 35 chr15 18641387 18641444 -82739077 + Tigger3(Golem) DNA MER2_type 49 103 -2926 * 2092 138 233 2 chr15 18641439 18641873 -82738648 + Tigger3(Golem) DNA MER2_type 2443 2976 -53 796 176 85 0 chr15 18641875 18642028 -82738493 + FRAM SINE Alu 1 166 -10 370 186 0 0 chr15 18642064 18642123 -82738398 + Tigger3(Golem) DNA MER2_type 2970 3028 -1 1839 155 3 3 chr15 18642337 18642640 -82737881 - AluJo SINE Alu -7 305 3 1563 208 0 0 chr15 18643437 18643721 -82736800 + AluJb SINE Alu 1 284 -28 206 289 0 0 chr15 18643916 18643961 -82736560 - MIR SINE MIR -25 237 193 1537 175 29 4 chr15 18644114 18644388 -82736133 + AluJo SINE Alu 1 281 -31 2040 131 13 0 chr15 18644455 18644761 -82735760 - AluSx SINE Alu 0 312 3 1843 131 0 54 chr15 18645007 18645321 -82735200 - AluJo SINE Alu -15 297 1 1142 298 90 23 chr15 18645743 18646025 -82734496 - MLT1K LTR MaLR -31 557 295 1771 122 0 57 chr15 18646025 18646321 -82734200 + AluSx SINE Alu 1 279 -33 1142 298 90 23 chr15 18646321 18646559 -82733962 - MLT1K LTR MaLR -293 295 2 1706 218 99 7 chr15 18646747 18647170 -82733351 + MLT1C LTR MaLR 6 467 0 330 287 11 0 chr15 18647304 18647398 -82733123 + MER58 DNA MER1_type 1 95 -291 518 202 0 48 chr15 18648359 18648483 -82732038 - L2 LINE L2 -5 3308 3191 362 311 0 0 chr15 18648485 18648575 -82731946 + MER58 DNA MER1_type 1 90 -251 2254 83 3 10 chr15 18648604 18648918 -82731603 + AluSq SINE Alu 1 312 -1 485 157 372 8 chr15 18648920 18649041 -82731480 + MER5A DNA MER1_type 17 181 -8 956 160 6 12 chr15 18649041 18649210 -82731311 + L1PB4 LINE L1 5830 5997 -159 1894 153 0 3 chr15 18649268 18649562 -82730959 + AluJb SINE Alu 2 294 -18 2139 77 11 0 chr15 18649564 18649850 -82730671 + AluSx SINE Alu 1 289 -23 598 239 0 0 chr15 18649876 18650006 -82730515 + L1PB4 LINE L1 6024 6153 -3 237 283 0 0 chr15 18650048 18650101 -82730420 + L2 LINE L2 3210 3262 -10 1722 202 97 36 chr15 18650101 18650279 -82730242 + MLT1D LTR MaLR 1 167 -338 1992 101 35 3 chr15 18650279 18650567 -82729954 - AluSx SINE Alu -15 297 1 1722 202 97 36 chr15 18650567 18650864 -82729657 + MLT1D LTR MaLR 167 505 0 413 306 112 0 chr15 18650899 18651033 -82729488 + MIR SINE MIR 61 209 -53 488 286 0 0 chr15 18651094 18651206 -82729315 + MIR SINE MIR 81 192 -70 1955 107 32 0 chr15 18651432 18651713 -82728808 - AluSx SINE Alu -22 290 1 2342 90 0 3 chr15 18652640 18652952 -82727569 - AluSx SINE Alu -1 311 1 192 318 153 0 chr15 18653042 18653127 -82727394 + L2 LINE L2 3175 3272 0 380 269 19 31 chr15 18653246 18653423 -82727098 - MIR3 SINE MIR -68 140 10 430 311 33 7 chr15 18653871 18654022 -82726499 - MIR SINE MIR -74 188 34 304 337 20 0 chr15 18654482 18654583 -82725938 - L2 LINE L2 -20 3293 3191 1024 192 56 14 chr15 18654585 18654750 -82725771 - MER58A DNA MER1_type -2196 224 47 2309 77 7 0 chr15 18654750 18655047 -82725474 + AluY SINE Alu 1 299 -12 1024 192 56 14 chr15 18655047 18655095 -82725426 - MER58A DNA MER1_type -2373 47 2 200 233 0 83 chr15 18655350 18655410 -82725111 + L2 LINE L2 3217 3271 -1 187 222 0 0 chr15 18655629 18655665 -82724856 + MIR SINE MIR 114 149 -59 2303 71 0 3 chr15 18655795 18656089 -82724432 + AluSc SINE Alu 1 293 -16 230 295 57 9 chr15 18656098 18656203 -82724318 - MIR SINE MIR -113 149 40 211 339 83 0 chr15 18656529 18656638 -82723883 + MIR3 SINE MIR 45 162 -46 2245 217 64 56 chr15 18656671 18656856 -82723665 + MER82 DNA MER2_type 37 219 -434 1991 121 10 0 chr15 18656856 18657146 -82723375 + AluSx SINE Alu 1 293 -19 2420 77 0 3 chr15 18657148 18657460 -82723061 + AluY SINE Alu 1 311 0 2245 217 64 56 chr15 18657460 18657880 -82722641 + MER82 DNA MER2_type 219 650 -3 1946 148 0 0 chr15 18657971 18658262 -82722259 - AluSq SINE Alu -17 296 6 661 149 174 8 chr15 18658266 18658387 -82722134 - AluJo SINE Alu -170 142 2 943 349 3 103 chr15 18658515 18658845 -82721676 - AluSp SINE Alu -6 297 1 332 167 15 0 chr15 18658870 18658936 -82721585 + AluJb SINE Alu 51 117 -185 1470 169 19 19 chr15 18658942 18659255 -82721266 - AluSp SINE Alu 0 313 1 844 85 15 0 chr15 18659261 18659391 -82721130 - AluSp SINE Alu -180 133 2 517 205 8 8 chr15 18659420 18659537 -82720984 + FLAM_C SINE Alu 1 117 -16 1567 141 10 61 chr15 18659548 18659861 -82720660 - AluSp SINE Alu -16 297 1 1308 172 12 86 chr15 18659888 18659999 -82720522 + AluJb SINE Alu 1 119 -183 1371 163 42 0 chr15 18659999 18660161 -82720360 - AluSp SINE Alu -18 295 114 396 0 0 0 chr15 18660161 18660205 -82720316 + (TTTA)n Simple_repeat Simple_repeat 1 44 0 1371 163 42 0 chr15 18660205 18660325 -82720196 - AluSp SINE Alu -199 114 1 1308 172 12 86 chr15 18660325 18660539 -82719982 + AluJb SINE Alu 119 302 0 185 250 143 0 chr15 18660794 18660850 -82719671 - MIR SINE MIR -93 169 106 314 216 77 115 chr15 18661115 18661385 -82719136 + L1MC5 LINE L1 7563 7842 -119 2061 110 0 0 chr15 18661385 18661667 -82718854 + AluSq SINE Alu 1 282 -31 212 77 26 0 chr15 18661671 18661710 -82718811 + (CAAA)n Simple_repeat Simple_repeat 2 41 0 314 216 77 115 chr15 18661710 18661800 -82718721 + L1MC5 LINE L1 7845 7914 -47 1842 149 10 0 chr15 18662989 18663290 -82717231 + AluSx SINE Alu 1 304 -8 1434 191 0 0 chr15 18663333 18663579 -82716942 + AluJo SINE Alu 1 246 -66 25 0 0 0 chr15 18664149 18664174 -82716347 + AT_rich Low_complexity Low_complexity 1 25 0 943 161 0 0 chr15 18669104 18669259 -82711262 - 7SLRNA srpRNA srpRNA -71 249 95 371 257 175 6 chr15 18670014 18670190 -82710331 - MIR SINE MIR -6 256 45 1886 130 0 86 chr15 18670203 18670527 -82709994 - AluSx SINE Alu -15 297 2 194 241 22 0 chr15 18671069 18671115 -82709406 - MIR SINE MIR -58 150 103 261 83 0 0 chr15 18671444 18671480 -82709041 + (A)n Simple_repeat Simple_repeat 1 36 0 228 216 39 0 chr15 18671614 18671665 -82708856 - MIR SINE MIR -61 147 95 514 229 141 40 chr15 18672640 18672850 -82707671 - MIR SINE MIR -10 252 16 183 253 120 13 chr15 18673132 18673207 -82707314 - MIR SINE MIR -106 102 20 350 288 76 8 chr15 18674450 18674568 -82705953 - L2 LINE L2 -3 3310 3185 300 314 139 7 chr15 18674587 18674724 -82705797 - MIR3 SINE MIR -23 185 31 388 271 57 62 chr15 18675666 18675858 -82704663 - MIR SINE MIR -70 192 2 211 259 0 19 chr15 18678033 18678087 -82702434 + (TG)n Simple_repeat Simple_repeat 2 54 0 2150 113 0 0 chr15 18678396 18678705 -82701816 + AluY SINE Alu 1 309 0 383 284 121 75 chr15 18678710 18678949 -82701572 - L1MEd LINE L1 -4939 1180 931 870 201 53 0 chr15 18678949 18679118 -82701403 - AluJb SINE Alu -2 310 133 277 214 0 0 chr15 18679129 18679185 -82701336 - MER3 DNA MER1_type -153 56 1 2217 128 3 3 chr15 18679275 18679587 -82700934 + AluJb SINE Alu 1 312 0 471 148 0 0 chr15 18680060 18680148 -82700373 + (TAGA)n Simple_repeat Simple_repeat 1 88 0 211 194 0 0 chr15 18680148 18680184 -82700337 + (CAGAGA)n Simple_repeat Simple_repeat 5 40 0 821 224 30 56 chr15 18680357 18680661 -82699860 + L1MA9 LINE L1 5987 6282 -30 323 275 25 0 chr15 18680825 18680905 -82699616 + L1MC4 LINE L1 6609 6690 -1352 1644 174 20 40 chr15 18680916 18681214 -82699307 + AluJo SINE Alu 1 292 -20 285 238 16 0 chr15 18681443 18681506 -82699015 + MIR SINE MIR 87 150 -112 1599 157 68 14 chr15 18681733 18682013 -82698508 + AluJb SINE Alu 1 295 -17 207 0 0 0 chr15 18682062 18682085 -82698436 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 746 176 8 0 chr15 18682091 18682210 -82698311 - FLAM_C SINE Alu -13 120 1 546 297 44 27 chr15 18682222 18682443 -82698078 - L1M4 LINE L1 -1468 4678 4449 1417 200 28 92 chr15 18682443 18682833 -82697688 - MLT1A1 LTR MaLR 0 365 1 546 297 44 27 chr15 18682833 18682907 -82697614 - L1M4 LINE L1 -1697 4449 4378 910 186 55 90 chr15 18682910 18683222 -82697299 - AluY SINE Alu 0 301 1 1994 146 7 13 chr15 18683759 18684068 -82696453 + AluJb SINE Alu 1 307 -5 201 345 0 0 chr15 18684287 18684342 -82696179 + MIR SINE MIR 21 75 -133 414 342 43 39 chr15 18684857 18685091 -82695430 - L1MC4 LINE L1 -1340 6702 6468 307 300 100 0 chr15 18685085 18685195 -82695326 - L1MC4 LINE L1 -1339 6703 6583 * 367 186 21 0 chr15 18685195 18685292 -82695229 + (CATATA)n Simple_repeat Simple_repeat 5 103 0 1389 122 77 12 chr15 18685318 18685565 -82694956 + L1PA10 LINE L1 5904 6166 -2 337 254 152 57 chr15 18686579 18687148 -82693373 - L1M4 LINE L1 -3311 2835 2196 2126 98 20 23 chr15 18687148 18687453 -82693068 - AluSg SINE Alu 0 310 7 337 254 152 57 chr15 18687453 18687530 -82692991 - L1M4 LINE L1 -3950 2196 2128 1288 74 11 32 chr15 18687819 18688031 -82692490 + AluSg/x SINE Alu 115 312 0 741 241 87 14 chr15 18688058 18688148 -82692373 - AluJo SINE Alu -90 222 140 1967 120 0 20 chr15 18688148 18688447 -82692074 + AluSq SINE Alu 17 309 -4 741 241 87 14 chr15 18688447 18688563 -82691958 - AluJo SINE Alu -172 140 1 1619 133 13 33 chr15 18688591 18688893 -82691628 + AluSp SINE Alu 1 296 -17 584 162 8 17 chr15 18688904 18689021 -82691500 - FLAM_C SINE Alu -26 117 2 1922 96 10 83 chr15 18689029 18689342 -82691179 + AluSx SINE Alu 22 311 -1 1580 167 3 24 chr15 18689354 18689647 -82690874 + AluSp SINE Alu 7 293 -20 243 0 0 0 chr15 18689647 18689674 -82690847 + (GA)n Simple_repeat Simple_repeat 2 28 0 776 220 13 48 chr15 18689701 18689814 -82690707 - AluJo SINE Alu -92 220 117 1790 138 0 47 chr15 18689814 18690132 -82690389 + AluSp SINE Alu 1 303 -10 776 220 13 48 chr15 18690132 18690245 -82690276 - AluJo SINE Alu -195 117 2 1752 183 49 16 chr15 18690249 18690637 -82689884 - LTR15 LTR ERV1 -92 401 1 229 269 60 0 chr15 18691255 18691322 -82689199 + L2 LINE L2 2204 2274 -1040 898 317 166 9 chr15 18691498 18692112 -82688409 + L2 LINE L2 2353 3062 -251 2331 74 3 7 chr15 18692849 18693148 -82687373 + AluY SINE Alu 1 298 -13 243 221 130 0 chr15 18693165 18693242 -82687279 + L1M4 LINE L1 4750 4836 -1310 624 293 25 37 chr15 18693739 18694060 -82686461 - L1MC4 LINE L1 -1 8041 7725 714 192 103 0 chr15 18694290 18694446 -82686075 - MER5A DNA MER1_type -2 187 16 2145 117 3 0 chr15 18694637 18694976 -82685545 + AluSx SINE Alu 1 340 0 330 269 52 28 chr15 18695632 18695893 -82684628 - L1P5 LINE L1 -711 5443 5174 1463 186 37 15 chr15 18696002 18696271 -82684250 - AluJo SINE Alu -37 275 1 793 151 68 14 chr15 18697016 18697162 -82683359 - MER5A DNA MER1_type -33 156 3 603 51 0 0 chr15 18697548 18697627 -82682894 + (TG)n Simple_repeat Simple_repeat 2 80 0 2062 125 3 10 chr15 18697628 18697916 -82682605 - AluSx SINE Alu -26 286 1 222 250 0 0 chr15 18698441 18698529 -82681992 + C-rich Low_complexity Low_complexity 2 89 0 410 301 66 0 chr15 18700468 18700604 -82679917 + MIR SINE MIR 48 192 -70 279 254 105 26 chr15 18700741 18700855 -82679666 + L2 LINE L2 3188 3310 -3 528 234 188 20 chr15 18702456 18702653 -82677868 + MIR SINE MIR 23 252 -10 2153 133 10 0 chr15 18702788 18703097 -82677424 + AluSp SINE Alu 1 312 -1 226 317 195 0 chr15 18703456 18703579 -82676942 + MIR3 SINE MIR 53 199 -9 186 340 113 0 chr15 18703921 18704027 -82676494 + MER5A DNA MER1_type 24 141 -48 2327 67 0 3 chr15 18704063 18704385 -82676136 - AluY SINE Alu 0 321 1 533 298 1 23 chr15 18704588 18705692 -82674829 + GA-rich Low_complexity Low_complexity 1 1079 0 27 0 0 0 chr15 18706498 18706525 -82673996 + AT_rich Low_complexity Low_complexity 1 27 0 1980 95 106 0 chr15 18706538 18706802 -82673719 + AluSx SINE Alu 1 292 -20 1770 149 49 14 chr15 18707430 18707718 -82672803 - AluSx SINE Alu -14 298 1 466 244 47 17 chr15 18707738 18707910 -82672611 - L1ME2 LINE L1 -2 6162 5986 289 309 59 59 chr15 18709061 18709265 -82671256 + MLT1L LTR MaLR 5 208 -407 416 256 64 0 chr15 18711479 18711604 -82668917 - MIR3 SINE MIR -34 174 42 379 298 159 7 chr15 18712449 18712600 -82667921 - MER5A DNA MER1_type -15 174 1 288 239 119 15 chr15 18712631 18712765 -82667756 - MIR SINE MIR -94 168 21 2232 129 3 0 chr15 18714286 18714595 -82665926 + AluSx SINE Alu 1 310 -2 358 78 0 0 chr15 18714810 18714861 -82665660 + Alu SINE Alu 2 52 -248 23 33 0 0 chr15 18715353 18715383 -82665138 + AT_rich Low_complexity Low_complexity 1 30 0 2047 141 0 3 chr15 18716068 18716351 -82664170 + AluSx SINE Alu 1 282 -30 189 0 0 0 chr15 18716394 18716415 -82664106 + (A)n Simple_repeat Simple_repeat 1 21 0 1015 227 3 43 chr15 18716419 18716459 -82664062 - Charlie5 DNA MER1_type -69 2555 2515 1983 123 3 69 chr15 18716459 18716777 -82663744 + AluSx SINE Alu 1 297 -15 1015 227 3 43 chr15 18716777 18717084 -82663437 - Charlie5 DNA MER1_type -109 2515 2222 254 115 0 138 chr15 18717854 18717941 -82662580 + (CACCC)n Simple_repeat Simple_repeat 4 78 0 2284 124 0 0 chr15 18718703 18719010 -82661511 + AluSx SINE Alu 1 307 -5 2181 139 3 0 chr15 18719033 18719342 -82661179 + AluSp SINE Alu 1 310 -3 766 288 105 24 chr15 18719877 18720087 -82660434 + L1ME2 LINE L1 5502 5694 -470 1842 161 13 3 chr15 18720087 18720392 -82660129 + AluJo SINE Alu 3 310 -2 766 288 105 24 chr15 18720392 18720601 -82659920 + L1ME2 LINE L1 5694 5955 -209 1662 141 92 0 chr15 18721692 18721954 -82658567 + AluJb SINE Alu 9 294 -18 1322 106 106 0 chr15 18722937 18723145 -82657376 - MER30 DNA MER1_type 0 230 1 320 238 133 0 chr15 18724115 18724220 -82656301 + L1M4 LINE L1 2568 2686 -3460 2345 71 0 49 chr15 18724222 18724530 -82655991 - AluY SINE Alu -18 293 1 318 193 53 26 chr15 18724530 18724551 -82655970 + (CATATA)n Simple_repeat Simple_repeat 4 23 -97 2058 87 0 18 chr15 18724551 18724826 -82655695 - AluY SINE Alu -11 300 31 318 193 53 26 chr15 18724826 18724918 -82655603 + (CATATA)n Simple_repeat Simple_repeat 23 120 0 2127 225 56 56 chr15 18724918 18725119 -82655402 + L1M4 LINE L1 2675 2875 -3271 2014 122 0 10 chr15 18725119 18725414 -82655107 + AluSq SINE Alu 1 292 -21 2127 225 56 56 chr15 18725414 18726033 -82654488 + L1M4 LINE L1 2870 3496 -2646 1671 183 31 0 chr15 18726033 18726322 -82654199 - AluJb SINE Alu -14 298 1 740 252 141 27 chr15 18726322 18726655 -82653866 - L1ME3 LINE L1 -107 6055 5685 288 196 0 0 chr15 18727191 18727237 -82653284 - AluY SINE Alu -253 46 1 2090 112 10 0 chr15 18727266 18727562 -82652959 + AluSq SINE Alu 6 304 -9 1703 159 4 0 chr15 18727590 18727860 -82652661 - AluJb SINE Alu -9 303 33 344 294 12 28 chr15 18728070 18728286 -82652235 + CT-rich Low_complexity Low_complexity 1 212 0 265 366 7 18 chr15 18728479 18728739 -82651782 + C-rich Low_complexity Low_complexity 1 257 0 2472 47 7 0 chr15 18729419 18729716 -82650805 + AluY SINE Alu 1 299 -12 976 253 25 8 chr15 18729751 18729988 -82650533 + MLT1H1 LTR MaLR 291 531 -24 225 94 0 0 chr15 18729988 18730020 -82650501 + (T)n Simple_repeat Simple_repeat 1 32 0 931 108 7 0 chr15 18730120 18730259 -82650262 - L1P4 LINE L1 -676 5485 5346 1071 138 0 6 chr15 18730259 18730432 -82650089 + L1PA13 LINE L1 5991 6163 0 693 276 22 41 chr15 18730438 18730740 -82649781 + L2 LINE L2 2736 3036 -277 1379 304 55 21 chr15 18730761 18731002 -82649519 + MLT1H1 LTR MaLR 1 233 -322 2462 51 7 0 chr15 18731002 18731297 -82649224 + AluY SINE Alu 1 297 -14 1379 304 55 21 chr15 18731297 18731569 -82648952 + MLT1H1 LTR MaLR 233 531 -24 22 0 0 0 chr15 18731580 18731602 -82648919 + AT_rich Low_complexity Low_complexity 1 22 0 2247 72 0 17 chr15 18731714 18732004 -82648517 + AluY SINE Alu 18 302 -9 276 105 0 0 chr15 18732009 18732047 -82648474 - tRNA-Phe-TTC tRNA tRNA -38 38 1 364 309 134 28 chr15 18732871 18732953 -82647568 + L1MC4a LINE L1 5856 5928 -1880 2155 118 3 3 chr15 18732953 18733266 -82647255 + AluSq SINE Alu 1 313 0 364 309 134 28 chr15 18733266 18733474 -82647047 + L1MC4a LINE L1 5928 6177 -1631 6465 175 45 23 chr15 18733769 18734540 -82645981 - L1 LINE L1 -1984 4162 3345 2031 148 0 7 chr15 18734540 18734845 -82645676 - AluSx SINE Alu -9 303 1 6465 175 45 23 chr15 18734845 18735441 -82645080 - L1 LINE L1 -2801 3345 2764 * 7666 153 20 8 chr15 18735433 18736754 -82643767 - L1 LINE L1 -1158 4988 3652 1838 213 38 27 chr15 18736754 18737233 -82643288 - L1 LINE L1 -3384 2762 2279 1147 205 139 13 chr15 18737247 18737550 -82642971 + MLT1E1 LTR MaLR 305 645 -9 737 191 8 15 chr15 18737742 18737873 -82642648 + AluJo SINE Alu 12 141 -171 1784 150 18 3 chr15 18737875 18738161 -82642360 + AluJb SINE Alu 1 290 -22 52 0 0 0 chr15 18738161 18738213 -82642308 + AT_rich Low_complexity Low_complexity 1 52 0 2230 113 3 3 chr15 18738506 18738808 -82641713 + AluY SINE Alu 1 302 -9 806 160 0 0 chr15 18738916 18739041 -82641480 + FLAM_C SINE Alu 1 125 -18 2051 98 61 0 chr15 18739340 18739617 -82640904 - AluSc SINE Alu -15 294 1 2229 106 7 0 chr15 18739648 18739940 -82640581 - AluSx SINE Alu -18 294 1 810 260 56 86 chr15 18740048 18740479 -82640042 + L1MD1 LINE L1 5825 6242 0 2293 78 17 3 chr15 18740898 18741193 -82639328 + AluSx SINE Alu 1 299 -13 2032 100 21 21 chr15 18741862 18742152 -82638369 + AluSx SINE Alu 1 290 -22 2161 105 17 3 chr15 18742667 18742962 -82637559 - AluSq SINE Alu -14 299 1 191 188 21 0 chr15 18744145 18744193 -82636328 + GA-rich Low_complexity Low_complexity 1 49 0 35 88 0 0 chr15 18744518 18744609 -82635912 + GC_rich Low_complexity Low_complexity 1 91 0 25 31 0 0 chr15 18744638 18744670 -82635851 + GC_rich Low_complexity Low_complexity 1 32 0 1633 133 48 44 chr15 18745266 18745560 -82634961 + AluJo SINE Alu 1 295 -17 2112 93 0 0 chr15 18745564 18745832 -82634689 + AluSx SINE Alu 1 268 -44 1451 152 13 0 chr15 18745839 18746063 -82634458 - AluJb SINE Alu -85 227 1 2189 117 3 3 chr15 18746286 18746593 -82633928 + AluSp SINE Alu 1 307 -6 267 158 0 0 chr15 18746667 18746705 -82633816 + Alu SINE Alu 6 43 -260 1379 167 40 0 chr15 18746705 18746927 -82633594 - AluJo SINE Alu -81 231 1 1622 240 112 14 chr15 18746927 18747443 -82633078 - L1ME3 LINE L1 -107 6055 5489 1827 108 35 0 chr15 18748572 18748830 -82631691 - AluSq SINE Alu -11 302 36 1484 61 0 0 chr15 18748835 18749015 -82631506 - AluY SINE Alu -13 298 119 1110 92 7 7 chr15 18749119 18749271 -82631250 - AluY SINE Alu -159 152 1 2310 78 0 0 chr15 18749398 18749702 -82630819 + AluY SINE Alu 1 304 0 6915 124 25 43 chr15 18750162 18750195 -82630326 + THE1B-int LTR MaLR 458 490 -1090 2292 68 23 16 chr15 18750195 18750503 -82630018 + AluY SINE Alu 1 310 -1 6915 124 25 43 chr15 18750503 18751612 -82628909 + THE1B-int LTR MaLR 490 1580 0 2579 109 8 16 chr15 18751612 18751979 -82628542 + THE1B LTR MaLR 1 364 0 49 71 0 0 chr15 18752970 18753068 -82627453 + AT_rich Low_complexity Low_complexity 1 98 0 564 258 40 36 chr15 18753218 18753443 -82627078 + L2 LINE L2 2511 2736 -578 2338 110 33 0 chr15 18753453 18753789 -82626732 - L1PA13 LINE L1 -189 5974 5628 2649 16 3 0 chr15 18753889 18754306 -82626215 + L1P1 LINE L1 5144 5561 -594 * 6373 169 47 23 chr15 18754302 18755038 -82625483 - L1 LINE L1 -2019 4127 3343 2164 135 0 3 chr15 18755038 18755342 -82625179 - AluSx SINE Alu -9 303 1 6373 169 47 23 chr15 18755342 18755937 -82624584 - L1 LINE L1 -2803 3343 2764 * 7841 151 17 7 chr15 18755929 18757252 -82623269 - L1 LINE L1 -1158 4988 3652 1855 217 35 27 chr15 18757252 18757731 -82622790 - L1 LINE L1 -3384 2762 2280 1137 202 129 14 chr15 18757762 18758049 -82622472 + MLT1E1 LTR MaLR 326 645 -9 729 200 21 14 chr15 18758230 18758370 -82622151 + AluJo SINE Alu 1 141 -171 1760 160 17 3 chr15 18758372 18758659 -82621862 + AluJb SINE Alu 1 291 -21 51 0 0 0 chr15 18758659 18758710 -82621811 + AT_rich Low_complexity Low_complexity 1 51 0 1225 167 84 4 chr15 18759003 18759278 -82621243 + AluY SINE Alu 1 297 -14 1457 202 26 0 chr15 18760074 18760346 -82620175 + AluJo SINE Alu 1 279 -33 188 86 29 0 chr15 18760348 18760383 -82620138 + (TAAAA)n Simple_repeat Simple_repeat 5 40 0 183 186 43 43 chr15 18760685 18760755 -82619766 - MIR SINE MIR -81 127 58 2129 47 98 7 chr15 18760915 18761190 -82619331 - AluY SINE Alu -11 300 1 248 157 20 0 chr15 18762175 18762226 -82618295 + MER41B LTR ERV1 483 534 -101 435 202 43 40 chr15 18762241 18762298 -82618223 + MER58B DNA MER1_type 70 125 -2295 2252 95 3 20 chr15 18762298 18762602 -82617919 + AluSg SINE Alu 1 299 -11 435 202 43 40 chr15 18762602 18762776 -82617745 + MER58B DNA MER1_type 125 340 -1 975 94 23 0 chr15 18763238 18763366 -82617155 + AluSg SINE Alu 1 131 -179 1229 150 0 0 chr15 18763783 18763970 -82616551 + AluSg SINE Alu 119 305 -5 747 180 0 0 chr15 18764080 18764208 -82616313 + FLAM_C SINE Alu 1 128 -5 2130 80 62 0 chr15 18764504 18764780 -82615741 - AluSc SINE Alu -16 293 1 2207 107 7 0 chr15 18764820 18765111 -82615410 - AluSx SINE Alu -19 293 1 865 254 58 86 chr15 18765219 18765649 -82614872 + L1MD1 LINE L1 5825 6242 0 2092 107 17 3 chr15 18766067 18766358 -82614163 + AluSx SINE Alu 1 295 -17 2179 99 20 16 chr15 18767026 18767330 -82613191 + AluSx SINE Alu 1 305 -7 2258 92 10 0 chr15 18767844 18768136 -82612385 - AluSq SINE Alu -18 295 1 21 36 0 0 chr15 18768461 18768489 -82612032 + AT_rich Low_complexity Low_complexity 1 28 0 303 270 30 10 chr15 18769255 18769355 -82611166 + GA-rich Low_complexity Low_complexity 2 103 0 197 176 0 70 chr15 18769355 18769497 -82611024 + (CCCCG)n Simple_repeat Simple_repeat 2 133 0 60 15 0 0 chr15 18769497 18769564 -82610957 + GC_rich Low_complexity Low_complexity 1 67 0 223 135 40 63 chr15 18769597 18769723 -82610798 + CT-rich Low_complexity Low_complexity 2 124 0 2313 67 0 0 chr15 18770517 18770821 -82609700 - AluY SINE Alu 0 304 1 2409 93 0 0 chr15 18771581 18771883 -82608638 - AluY SINE Alu -9 302 1 303 98 0 0 chr15 18771917 18771958 -82608563 + MIR3 SINE MIR 147 187 -21 285 222 0 0 chr15 18771918 18771972 -82608549 + L3 LINE CR1 1521 1574 -3 * 1492 248 81 27 chr15 18772808 18773251 -82607270 + MLT1C LTR MaLR 1 467 0 2395 68 0 0 chr15 18775861 18776157 -82604364 + AluY SINE Alu 1 296 -15 594 278 130 40 chr15 18776565 18776918 -82603603 - L1ME3A LINE L1 -4 6166 5782 640 262 179 19 chr15 18776920 18777183 -82603338 - L1ME3A LINE L1 -428 5734 5430 265 178 0 0 chr15 18777713 18777758 -82602763 - AluJb SINE Alu -9 293 249 679 187 0 0 chr15 18777794 18777901 -82602620 - AluJb SINE Alu -70 242 136 302 252 16 106 chr15 18778080 18778203 -82602318 + MIR SINE MIR 47 158 -104 776 274 55 30 chr15 18778216 18778544 -82601977 - LTR16B LTR ERVL 0 464 129 239 0 32 0 chr15 18778624 18778655 -82601866 + (TTTA)n Simple_repeat Simple_repeat 1 32 0 5825 70 5 4 chr15 18778656 18779414 -82601107 - L1PA7 LINE L1 -13 6141 5383 207 0 0 0 chr15 18779632 18779655 -82600866 + (TC)n Simple_repeat Simple_repeat 2 24 0 * 270 81 0 0 chr15 18779654 18779691 -82600830 + (TA)n Simple_repeat Simple_repeat 2 38 0 2620 49 0 0 chr15 18779940 18780244 -82600277 - AluY SINE Alu -7 304 1 2393 39 4 0 chr15 18780674 18780992 -82599529 + AluY SINE Alu 1 319 0 1130 158 11 5 chr15 18780995 18781185 -82599336 - L1PB3 LINE L1 -5 6149 5959 231 318 73 27 chr15 18781710 18781820 -82598701 + L2 LINE L2 3158 3272 0 184 70 70 18 chr15 18782074 18782131 -82598390 + (TA)n Simple_repeat Simple_repeat 1 60 0 443 137 32 55 chr15 18782404 18782877 -82597644 + (TA)n Simple_repeat Simple_repeat 1 462 0 405 141 33 56 chr15 18782879 18783156 -82597365 + (TATATG)n Simple_repeat Simple_repeat 1 270 0 210 133 40 46 chr15 18783167 18783340 -82597181 + (TA)n Simple_repeat Simple_repeat 1 172 0 24 67 0 0 chr15 18784597 18784642 -82595879 + AT_rich Low_complexity Low_complexity 1 45 0 299 232 52 45 chr15 18785308 18785463 -82595058 + Charlie7 DNA MER1_type 2421 2576 -36 2475 58 6 13 chr15 18786014 18786325 -82594196 - AluSp SINE Alu -4 309 1 22 35 0 0 chr15 18786568 18786597 -82593924 + AT_rich Low_complexity Low_complexity 1 29 0 997 320 120 35 chr15 18786855 18787387 -82593134 - L2 LINE L2 0 3313 2828 2205 118 0 0 chr15 18787387 18787691 -82592830 + AluSx SINE Alu 1 304 -8 997 320 120 35 chr15 18787691 18788199 -82592322 - L2 LINE L2 -485 2828 2180 707 89 0 20 chr15 18788404 18788505 -82592016 + AluSc SINE Alu 202 300 -9 348 313 32 47 chr15 18788620 18788898 -82591623 - L1ME4a LINE L1 -140 5981 5708 261 0 0 0 chr15 18789337 18789366 -82591155 + (A)n Simple_repeat Simple_repeat 1 29 0 297 0 0 0 chr15 18790575 18790608 -82589913 + (CA)n Simple_repeat Simple_repeat 2 34 0 2280 57 0 0 chr15 18791577 18791889 -82588632 - AluY SINE Alu 0 312 1 26 30 0 0 chr15 18792031 18792064 -82588457 + AT_rich Low_complexity Low_complexity 1 33 0 1693 167 0 44 chr15 18792583 18792901 -82587620 + AluJb SINE Alu 9 312 0 255 345 0 0 chr15 18793274 18793358 -82587163 - L2 LINE L2 0 3313 3230 273 262 24 12 chr15 18793462 18793546 -82586975 - L2 LINE L2 -1 3312 3228 2435 76 0 0 chr15 18793898 18794201 -82586320 + AluY SINE Alu 1 303 -8 25 31 0 0 chr15 18794233 18794265 -82586256 + AT_rich Low_complexity Low_complexity 1 32 0 235 143 18 0 chr15 18794734 18794790 -82585731 + C-rich Low_complexity Low_complexity 3 59 0 324 261 101 138 chr15 18795418 18796068 -82584453 + L1M2 LINE L1 451 1450 -5399 871 130 0 0 chr15 18799616 18799739 -82580782 + AluSg/x SINE Alu 172 294 -18 227 200 29 29 chr15 18799963 18800033 -82580488 + L1MC5 LINE L1 7856 7925 -36 5371 211 69 83 chr15 18800900 18801469 -82579052 + L1MDa LINE L1 831 1406 -5134 1937 120 4 0 chr15 18801469 18801744 -82578777 + AluSg SINE Alu 1 276 -34 5371 211 69 83 chr15 18801744 18802684 -82577837 + L1MDa LINE L1 1406 2358 -4182 1763 158 83 9 chr15 18802684 18803020 -82577501 - MER46B DNA MER2_type 0 236 1 5371 211 69 83 chr15 18803020 18803458 -82577063 + L1MDa LINE L1 2358 2801 -3739 2214 108 26 7 chr15 18803458 18803765 -82576756 + AluSq SINE Alu 1 313 0 5371 211 69 83 chr15 18803765 18805465 -82575056 + L1MDa LINE L1 2801 4422 -2118 273 311 126 0 chr15 18806383 18806502 -82574019 - MIR SINE MIR 0 262 129 2247 93 13 3 chr15 18806537 18806839 -82573682 - AluY SINE Alu -6 305 1 193 366 183 0 chr15 18806841 18806934 -82573587 - MIR SINE MIR -113 149 40 1822 91 14 47 chr15 18807094 18807370 -82573151 + AluSp SINE Alu 34 300 -13 1922 132 0 35 chr15 18807372 18807682 -82572839 + AluSq SINE Alu 1 299 -14 335 321 38 24 chr15 18807715 18807927 -82572594 + L1MEc LINE L1 1850 2064 -4332 849 245 144 25 chr15 18807936 18808304 -82572217 + L1MEc LINE L1 2215 2626 -3589 411 167 0 0 chr15 18809120 18809180 -82571341 - AluS SINE Alu -19 290 231 1239 121 0 0 chr15 18809182 18809347 -82571174 - AluSq SINE Alu -148 165 1 2124 194 84 20 chr15 18809347 18809905 -82570616 + L1MEc LINE L1 2752 3345 -2870 271 309 31 0 chr15 18809948 18810045 -82570476 - MIR SINE MIR -22 240 141 805 209 26 13 chr15 18810053 18810206 -82570315 - FRAM SINE Alu -21 155 1 1318 90 0 0 chr15 18810571 18810738 -82569783 + AluY SINE Alu 131 297 -14 2393 101 0 3 chr15 18810762 18811070 -82569451 + AluSq SINE Alu 1 307 -6 1425 173 43 18 chr15 18811073 18811350 -82569171 + L1M3 LINE L1 5325 5608 -572 663 229 0 0 chr15 18811351 18811469 -82569052 + FLAM_C SINE Alu 2 119 -24 722 108 0 0 chr15 18811479 18811581 -82568940 + L1MB3 LINE L1 6074 6175 -8 25 31 0 0 chr15 18811581 18811613 -82568908 + AT_rich Low_complexity Low_complexity 1 32 0 2603 59 0 0 chr15 18812028 18812332 -82568189 + AluY SINE Alu 1 304 -7 443 241 73 7 chr15 18812905 18813042 -82567479 - MER21B LTR ERV1 -57 806 661 581 220 16 44 chr15 18813046 18813228 -82567293 + L1MDa LINE L1 1543 1719 -4821 2057 162 117 5 chr15 18813273 18813700 -82566821 + LTR53 LTR ERVL 5 479 -40 825 222 57 4 chr15 18813773 18814003 -82566518 + L1ME2 LINE L1 5323 5564 -2431 902 248 17 111 chr15 18814156 18814262 -82566259 + MER58B DNA MER1_type 3 117 -2303 1687 79 8 75 chr15 18814262 18814514 -82566007 - AluSx SINE Alu -77 235 1 902 248 17 111 chr15 18814514 18814779 -82565742 + MER58B DNA MER1_type 117 339 -2 2021 149 0 0 chr15 18815010 18815312 -82565209 + AluSg1 SINE Alu 1 302 -7 21 0 0 0 chr15 18815504 18815525 -82564996 + AT_rich Low_complexity Low_complexity 1 21 0 792 237 118 28 chr15 18816382 18816669 -82563852 + L1ME2 LINE L1 5851 6163 -1 306 0 0 0 chr15 18816822 18816856 -82563665 + (TG)n Simple_repeat Simple_repeat 1 34 0 28 0 0 0 chr15 18816870 18816898 -82563623 + AT_rich Low_complexity Low_complexity 1 28 0 2250 114 0 3 chr15 18816961 18817269 -82563252 - AluSx SINE Alu -2 310 4 878 106 8 0 chr15 18817447 18817579 -82562942 - AluSp SINE Alu -180 133 1 843 219 60 33 chr15 18817608 18817732 -82562789 + AluJo SINE Alu 2 136 -176 1873 118 0 21 chr15 18817732 18818020 -82562501 - AluSq SINE Alu -15 298 17 843 219 60 33 chr15 18818020 18818110 -82562411 + AluJo SINE Alu 136 222 -90 1381 60 11 11 chr15 18818167 18818349 -82562172 - AluSg/x SINE Alu -16 294 113 506 240 150 61 chr15 18818551 18818715 -82561806 + L1MDa LINE L1 2469 2617 -3923 2067 102 20 23 chr15 18818715 18819020 -82561501 + AluSg SINE Alu 7 310 0 506 240 150 61 chr15 18819020 18819589 -82560932 + L1MDa LINE L1 2617 3229 -3311 523 302 0 23 chr15 18819774 18820268 -82560253 + CT-rich Low_complexity Low_complexity 1 482 0 2345 68 0 0 chr15 18820457 18820774 -82559747 + AluY SINE Alu 1 317 0 183 340 113 0 chr15 18820810 18820916 -82559605 - MER5A DNA MER1_type -48 141 24 195 317 195 0 chr15 18821258 18821381 -82559140 - MIR3 SINE MIR -9 199 53 2114 130 10 0 chr15 18821728 18822040 -82558481 - AluSp SINE Alu -2 311 1 512 238 192 21 chr15 18822179 18822372 -82558149 - MIR SINE MIR -14 248 23 270 254 105 26 chr15 18823973 18824087 -82556434 - L2 LINE L2 -3 3310 3188 410 301 66 0 chr15 18824224 18824360 -82556161 - MIR SINE MIR -70 192 48 222 250 0 0 chr15 18826299 18826387 -82554134 + G-rich Low_complexity Low_complexity 2 89 0 1892 132 3 10 chr15 18826911 18827199 -82553322 + AluSx SINE Alu 1 286 -26 438 53 0 0 chr15 18827200 18827257 -82553264 + (CA)n Simple_repeat Simple_repeat 2 58 0 790 151 68 14 chr15 18827643 18827789 -82552732 + MER5A DNA MER1_type 3 156 -33 1326 186 37 15 chr15 18828534 18828803 -82551718 + AluJo SINE Alu 1 275 -37 352 248 106 33 chr15 18828912 18829259 -82551262 + L1P2 LINE L1 5174 5565 -589 2006 117 3 0 chr15 18829830 18830176 -82550345 - AluSx SINE Alu 0 347 1 717 186 103 0 chr15 18830367 18830523 -82549998 + MER5A DNA MER1_type 16 187 -2 669 293 25 37 chr15 18830753 18831074 -82549447 + L1MC4 LINE L1 7725 8041 -1 262 221 130 0 chr15 18831571 18831648 -82548873 - L1M4 LINE L1 -1310 4836 4750 2206 74 3 7 chr15 18831665 18831964 -82548557 - AluY SINE Alu -13 298 1 851 318 165 14 chr15 18832694 18833316 -82547205 - L2 LINE L2 -245 3068 2353 233 269 60 0 chr15 18833492 18833559 -82546962 - L2 LINE L2 -1040 2274 2204 1843 186 49 13 chr15 18834177 18834564 -82545957 + LTR15 LTR ERV1 1 401 -92 738 220 13 48 chr15 18834568 18834681 -82545840 + AluJo SINE Alu 2 105 -207 1634 141 0 50 chr15 18834681 18835000 -82545521 - AluSp SINE Alu -10 303 1 738 220 13 48 chr15 18835000 18835113 -82545408 + AluJo SINE Alu 105 220 -92 252 33 0 0 chr15 18835115 18835145 -82545376 + AluJb SINE Alu 88 117 -185 1449 175 3 20 chr15 18835156 18835453 -82545068 - AluSp SINE Alu -15 298 7 1121 113 0 59 chr15 18835465 18835668 -82544853 - AluSg/x SINE Alu -1 311 121 2353 74 0 10 chr15 18886109 18886406 -82494115 - AluY SINE Alu -13 298 5 24 0 0 0 chr15 18886413 18886437 -82494084 + AT_rich Low_complexity Low_complexity 1 24 0 2130 133 0 0 chr15 18886508 18886802 -82493719 + AluJb SINE Alu 1 294 -18 2322 100 0 3 chr15 18886921 18887221 -82493300 + AluSx SINE Alu 1 299 -13 2322 109 3 0 chr15 18887225 18887537 -82492984 + AluSp SINE Alu 1 313 0 2087 138 0 0 chr15 18887697 18887993 -82492528 - AluSx SINE Alu -16 296 1 2131 105 10 0 chr15 18888022 18888318 -82492203 + AluSq SINE Alu 6 304 -9 448 257 37 39 chr15 18888320 18888346 -82492175 - L1M4 LINE L1 -3749 2633 2608 1908 162 3 0 chr15 18888346 18888648 -82491873 - AluJb SINE Alu -9 303 1 448 257 37 39 chr15 18888648 18888832 -82491689 - L1M4 LINE L1 -3774 2608 2421 2137 120 3 3 chr15 18888834 18889135 -82491386 - AluSp SINE Alu -12 301 1 1451 152 13 0 chr15 18889358 18889582 -82490939 + AluJb SINE Alu 1 227 -85 2112 93 0 0 chr15 18889589 18889857 -82490664 - AluSx SINE Alu -44 268 1 1720 135 0 75 chr15 18889861 18890180 -82490341 - AluJo SINE Alu -17 295 1 35 88 0 0 chr15 18890837 18890928 -82489593 + GC_rich Low_complexity Low_complexity 1 91 0 191 188 21 0 chr15 18891256 18891304 -82489217 + CT-rich Low_complexity Low_complexity 1 49 0 21 36 0 0 chr15 18892126 18892154 -82488367 + AT_rich Low_complexity Low_complexity 1 28 0 2258 92 10 0 chr15 18892479 18892771 -82487750 + AluSq SINE Alu 1 295 -18 2209 95 20 16 chr15 18893285 18893589 -82486932 - AluSx SINE Alu -7 305 1 2083 107 17 3 chr15 18894257 18894547 -82485974 - AluSx SINE Alu -18 294 1 882 251 58 86 chr15 18894965 18895395 -82485126 - L1MD1 LINE L1 0 6242 5825 2207 107 7 0 chr15 18895503 18895794 -82484727 + AluSx SINE Alu 1 293 -19 2130 80 62 0 chr15 18895834 18896110 -82484411 + AluSc SINE Alu 1 293 -16 747 180 0 0 chr15 18896406 18896534 -82483987 - FLAM_C SINE Alu -5 128 1 1229 150 0 0 chr15 18896644 18896831 -82483690 - AluSg SINE Alu -5 305 119 975 94 23 0 chr15 18897249 18897377 -82483144 - AluSg SINE Alu -179 131 1 435 202 43 40 chr15 18897839 18898013 -82482508 - MER58B DNA MER1_type -2080 340 125 2244 96 3 20 chr15 18898013 18898316 -82482205 - AluSg SINE Alu -12 298 1 435 202 43 40 chr15 18898316 18898373 -82482148 - MER58B DNA MER1_type -2295 125 70 248 157 20 0 chr15 18898388 18898439 -82482082 - MER41A LTR ERV1 -101 453 402 2166 43 98 7 chr15 18899424 18899700 -82480821 + AluY SINE Alu 1 301 -10 183 186 43 43 chr15 18899860 18899930 -82480591 + MIR SINE MIR 58 127 -81 188 86 29 0 chr15 18900232 18900267 -82480254 + (TTTTA)n Simple_repeat Simple_repeat 5 40 0 1457 202 26 0 chr15 18900269 18900541 -82479980 - AluJo SINE Alu -33 279 1 190 350 17 8 chr15 18901134 18901254 -82479267 + L2 LINE L2 2164 2284 -1030 2008 140 3 3 chr15 18901410 18901710 -82478811 - AluJb SINE Alu -12 300 1 2231 120 0 0 chr15 18901789 18902098 -82478423 - AluY SINE Alu -2 309 1 51 0 0 0 chr15 18902391 18902442 -82478079 + AT_rich Low_complexity Low_complexity 1 51 0 1760 160 17 3 chr15 18902442 18902729 -82477792 - AluJb SINE Alu -21 291 1 729 200 21 14 chr15 18902731 18902871 -82477650 - AluJo SINE Alu -171 141 1 1137 202 129 14 chr15 18903052 18903339 -82477182 - MLT1E1 LTR MaLR -9 645 326 1855 217 35 27 chr15 18903370 18903849 -82476672 + L1MA3 LINE L1 2280 2762 -3384 7841 151 17 7 chr15 18903849 18905172 -82475349 + L1 LINE L1 3652 4988 -1158 6397 169 47 23 chr15 18905164 18905759 -82474762 + L1MA3 LINE L1 2764 3344 -2802 * 2164 135 0 3 chr15 18905759 18906063 -82474458 + AluSx SINE Alu 1 303 -9 6397 169 47 23 chr15 18906063 18906800 -82473721 + L1MA3 LINE L1 3344 4127 -2019 5266 22 2 3 chr15 18906796 18907590 -82472931 - L1PA2 LINE L1 -594 5561 4770 * 5382 15 0 8 chr15 18907590 18908184 -82472337 + L1PA2 LINE L1 5553 6155 0 6106 146 16 40 chr15 18908191 18908230 -82472291 + L1MA3 LINE L1 4124 4162 -2143 2189 133 13 0 chr15 18908230 18908538 -82471983 + AluSx SINE Alu 1 312 0 6106 146 16 40 chr15 18908538 18908701 -82471820 + L1MA3 LINE L1 4162 4327 -1978 2387 101 0 0 chr15 18908701 18909009 -82471512 - AluSx SINE Alu -4 308 1 6106 146 16 40 chr15 18909009 18910795 -82469726 + L1MA3 LINE L1 4327 6059 -246 2170 119 3 0 chr15 18910795 18911090 -82469431 + AluSc SINE Alu 1 296 -13 429 70 0 0 chr15 18911111 18911168 -82469353 + (TA)n Simple_repeat Simple_repeat 1 57 0 22 0 0 0 chr15 18911408 18911430 -82469091 + AT_rich Low_complexity Low_complexity 1 22 0 2187 128 0 0 chr15 18911464 18911761 -82468760 - AluSx SINE Alu -15 297 1 471 270 138 6 chr15 18911794 18911953 -82468568 - L1MD3 LINE L1 -1153 6842 6663 2170 125 3 6 chr15 18912040 18912353 -82468168 - AluSx SINE Alu 0 312 1 25 51 0 0 chr15 18912472 18912511 -82468010 + AT_rich Low_complexity Low_complexity 1 39 0 390 300 144 34 chr15 18912542 18912812 -82467709 - L1MC4a LINE L1 -1561 6247 5928 2171 115 3 3 chr15 18912812 18913125 -82467396 - AluSq SINE Alu 0 313 1 390 300 144 34 chr15 18913125 18913207 -82467314 - L1MC4a LINE L1 -1880 5928 5856 276 105 0 0 chr15 18914031 18914069 -82466452 + tRNA-Phe-TTC tRNA tRNA 1 38 -38 2367 75 0 16 chr15 18914074 18914380 -82466141 - AluY SINE Alu -9 302 2 2266 114 0 3 chr15 18914443 18914751 -82465770 + AluSx SINE Alu 4 310 -2 28 0 0 0 chr15 18914814 18914842 -82465679 + AT_rich Low_complexity Low_complexity 1 28 0 273 29 0 0 chr15 18914855 18914889 -82465632 + (CA)n Simple_repeat Simple_repeat 1 34 0 798 233 118 28 chr15 18915042 18915329 -82465192 - L1ME2 LINE L1 -1 6163 5851 2039 149 0 0 chr15 18916398 18916700 -82463821 - AluSg1 SINE Alu -7 302 1 895 248 17 111 chr15 18916932 18917197 -82463324 - MER58B DNA MER1_type -2081 339 117 1710 79 8 75 chr15 18917197 18917449 -82463072 + AluSx SINE Alu 1 235 -77 895 248 17 111 chr15 18917449 18917555 -82462966 - MER58B DNA MER1_type -2303 117 3 813 222 57 4 chr15 18917707 18917937 -82462584 - L1ME2 LINE L1 -2431 5564 5323 2073 164 117 5 chr15 18918010 18918437 -82462084 - LTR53 LTR ERVL -40 479 5 577 220 16 44 chr15 18918482 18918664 -82461857 - L1MDa LINE L1 -4821 1719 1543 443 241 73 7 chr15 18918668 18918805 -82461716 + MER21B LTR ERV1 661 806 -57 2617 59 0 0 chr15 18919378 18919681 -82460840 - AluY SINE Alu -8 303 1 25 31 0 0 chr15 18920096 18920128 -82460393 + AT_rich Low_complexity Low_complexity 1 32 0 694 108 0 0 chr15 18920128 18920230 -82460291 - L1MB3 LINE L1 -8 6175 6074 606 237 0 0 chr15 18920240 18920358 -82460163 - FLAM_C SINE Alu -24 119 2 1415 173 43 18 chr15 18920359 18920636 -82459885 - L1M3 LINE L1 -572 5608 5325 2396 101 0 3 chr15 18920639 18920946 -82459575 - AluSq SINE Alu -7 306 1 1441 83 0 0 chr15 18920956 18921137 -82459384 - AluY SINE Alu 0 311 131 742 209 26 13 chr15 18921502 18921655 -82458866 + FRAM SINE Alu 1 155 -21 246 309 31 0 chr15 18921663 18921760 -82458761 + MIR SINE MIR 141 240 -22 2080 194 84 20 chr15 18921803 18922361 -82458160 - L1M3 LINE L1 -2870 3276 2683 1251 121 0 0 chr15 18922361 18922526 -82457995 + AluSq SINE Alu 1 165 -148 397 167 0 0 chr15 18922528 18922588 -82457933 + AluS SINE Alu 233 292 -9 833 242 148 25 chr15 18923382 18923775 -82456746 - L1M3 LINE L1 -3560 2586 2146 314 325 38 24 chr15 18923784 18923996 -82456525 - L1MEc LINE L1 -4332 2064 1850 1935 132 0 35 chr15 18924029 18924339 -82456182 - AluSq SINE Alu -14 299 1 1842 99 15 33 chr15 18924341 18924613 -82455908 - AluSp SINE Alu -13 300 34 2264 93 13 3 chr15 18924868 18925170 -82455351 + AluY SINE Alu 1 305 -6 245 311 126 0 chr15 18925205 18925324 -82455197 + MIR SINE MIR 129 262 0 5260 211 69 83 chr15 18926242 18927943 -82452578 - L1MDa LINE L1 -2118 4422 2699 2232 108 26 7 chr15 18927943 18928250 -82452271 - AluSq SINE Alu 0 313 1 5260 211 69 83 chr15 18928250 18928688 -82451833 - L1MDa LINE L1 -3841 2699 2256 1667 158 83 9 chr15 18928688 18929024 -82451497 + MER46B DNA MER2_type 1 236 0 5260 211 69 83 chr15 18929024 18929962 -82450559 - L1MDa LINE L1 -4284 2256 1406 1948 124 4 0 chr15 18929962 18930237 -82450284 - AluSg SINE Alu -34 276 1 5260 211 69 83 chr15 18930237 18930806 -82449715 - L1MDa LINE L1 -5134 1406 831 2226 104 0 17 chr15 18931967 18932266 -82448255 - AluSx SINE Alu -18 294 1 492 264 34 7 chr15 18932347 18932495 -82448026 + MIR SINE MIR 81 232 -30 1401 153 142 47 chr15 18933054 18933237 -82447284 - AluJo SINE Alu -11 301 82 324 0 0 0 chr15 18933237 18933273 -82447248 + (TG)n Simple_repeat Simple_repeat 1 36 0 1401 153 142 47 chr15 18933273 18933364 -82447157 - AluJo SINE Alu -230 82 1 2048 97 48 7 chr15 18933599 18933888 -82446633 + AluSp SINE Alu 1 301 -12 206 246 15 0 chr15 18934219 18934284 -82446237 + T-rich Low_complexity Low_complexity 4 69 0 1409 178 63 72 chr15 18934306 18934492 -82446029 - MER2 DNA MER2_type 0 345 159 1607 160 82 3 chr15 18934492 18934774 -82445747 - AluJb SINE Alu -8 304 1 792 164 0 15 chr15 18934780 18934914 -82445607 - FLAM_C SINE Alu 0 133 2 1409 178 63 72 chr15 18934914 18935068 -82445453 - MER2 DNA MER2_type -191 154 1 1029 210 174 3 chr15 18935415 18935743 -82444778 - L1MD2 LINE L1 -16 6343 5960 25 31 0 0 chr15 18935775 18935807 -82444714 + AT_rich Low_complexity Low_complexity 1 32 0 1292 175 18 13 chr15 18935807 18936035 -82444486 - AluJo SINE Alu -24 288 60 344 172 81 46 chr15 18936035 18936122 -82444399 - L1MD2 LINE L1 -469 5890 5801 1827 120 11 19 chr15 18936123 18936389 -82444132 - AluSx SINE Alu 0 312 49 1708 114 4 0 chr15 18936673 18936910 -82443611 - AluSg/x SINE Alu 0 310 73 818 93 0 0 chr15 18937078 18937213 -82443308 - AluY SINE Alu 0 309 175 239 300 90 0 chr15 18938027 18938127 -82442394 + MIR SINE MIR 40 148 -60 21 36 0 0 chr15 18939101 18939129 -82441392 + AT_rich Low_complexity Low_complexity 1 28 0 2188 93 0 23 chr15 18941207 18941508 -82439013 - AluY SINE Alu -17 294 1 28 48 0 0 chr15 18942561 18942603 -82437918 + AT_rich Low_complexity Low_complexity 1 42 0 270 81 0 0 chr15 18942607 18942644 -82437877 + (TCTA)n Simple_repeat Simple_repeat 4 40 0 189 0 0 0 chr15 18942665 18942686 -82437835 + (TCTA)n Simple_repeat Simple_repeat 4 24 0 1590 111 0 4 chr15 18942710 18942935 -82437586 + AluSp SINE Alu 85 308 -5 1053 252 45 13 chr15 18945999 18946309 -82434212 - L1ME1 LINE L1 -44 6122 5803 2245 103 3 0 chr15 18946364 18946655 -82433866 - AluSq SINE Alu -21 292 1 708 234 53 6 chr15 18948558 18948729 -82431792 + MER58A DNA MER1_type 45 223 -1 1921 151 43 0 chr15 18948840 18949139 -82431382 - AluSx SINE Alu 0 312 1 225 128 26 0 chr15 18950822 18950861 -82429660 - MER58B DNA MER1_type 0 341 302 1591 252 29 25 chr15 18952148 18952675 -82427846 - L1M4 LINE L1 -1779 4367 3839 922 130 0 0 chr15 18952695 18952826 -82427695 - FLAM_C SINE Alu -7 136 6 2803 237 55 51 chr15 18952830 18952898 -82427623 - L1M4 LINE L1 -2300 3846 3780 2080 116 0 47 chr15 18952898 18953216 -82427305 - AluSx SINE Alu -9 303 1 2803 237 55 51 chr15 18953216 18953495 -82427026 - L1M4 LINE L1 -2366 3780 3504 2298 107 3 3 chr15 18953495 18953803 -82426718 + AluSq SINE Alu 2 309 -4 2803 237 55 51 chr15 18953803 18954412 -82426109 - L1M4 LINE L1 -2642 3504 2881 1974 128 3 10 chr15 18954412 18954701 -82425820 - AluSp SINE Alu -26 287 1 2803 237 55 51 chr15 18954701 18954905 -82425616 - L1M4 LINE L1 -3265 2881 2679 369 92 0 19 chr15 18954905 18955143 -82425378 + AluY SINE Alu 1 295 -6 280 188 94 0 chr15 18955145 18955209 -82425312 - L1M4 LINE L1 -3460 2686 2617 1963 74 0 4 chr15 18955994 18956236 -82424285 + AluY SINE Alu 1 241 -70 1026 248 158 38 chr15 18957252 18957535 -82422986 - L1ME2 LINE L1 -112 6052 5805 1683 174 10 3 chr15 18957535 18957833 -82422688 - AluJb SINE Alu -10 302 3 1026 248 158 38 chr15 18957833 18958054 -82422467 - L1ME2 LINE L1 -359 5805 5487 1984 138 7 0 chr15 18958583 18958887 -82421634 - AluSp SINE Alu -7 306 1 2165 121 0 13 chr15 18958904 18959209 -82421312 - AluSx SINE Alu -11 301 1 280 246 32 56 chr15 18960659 18960785 -82419736 + Charlie5 DNA MER1_type 1 123 -2489 * 1099 218 5 63 chr15 18960768 18961077 -82419444 + Charlie5 DNA MER1_type 2222 2508 -116 2251 106 3 0 chr15 18961077 18961370 -82419151 - AluSx SINE Alu -18 294 1 1099 218 5 63 chr15 18961370 18961427 -82419094 + Charlie5 DNA MER1_type 2508 2567 -57 2044 153 0 0 chr15 18961434 18961728 -82418793 - AluSx SINE Alu -18 294 1 23 33 0 0 chr15 18962408 18962438 -82418083 + AT_rich Low_complexity Low_complexity 1 30 0 2082 101 0 34 chr15 18962934 18963231 -82417290 + AluSc SINE Alu 1 287 -22 2454 81 7 3 chr15 18965161 18965469 -82415052 + AluSq SINE Alu 1 309 -4 21 0 0 0 chr15 18965570 18965591 -82414930 + AT_rich Low_complexity Low_complexity 1 21 0 790 171 0 8 chr15 18965593 18965722 -82414799 + FLAM_A SINE Alu 1 128 -5 609 179 0 0 chr15 18967200 18967323 -82413198 + (TG)n Simple_repeat Simple_repeat 2 124 0 2127 128 0 0 chr15 18967326 18967623 -82412898 - AluSx SINE Alu -15 297 1 189 271 0 0 chr15 18967625 18967684 -82412837 + L3b LINE CR1 1355 1413 -170 1106 272 101 34 chr15 18968500 18968714 -82411807 - L1ME2 LINE L1 -299 5865 5667 1445 155 102 11 chr15 18968714 18968978 -82411543 - AluJb SINE Alu -21 291 4 1106 272 101 34 chr15 18968978 18969795 -82410726 - L1ME2 LINE L1 -497 5667 4830 1064 264 53 24 chr15 18969822 18970239 -82410282 - L1ME2 LINE L1 -1995 4151 3723 242 302 17 17 chr15 18970496 18970612 -82409909 - L1ME2 LINE L1 -2475 3671 3556 * 4608 179 60 8 chr15 18970591 18971040 -82409481 - L1MB3 LINE L1 -31 6152 5728 2261 101 3 7 chr15 18971040 18971348 -82409173 - AluSc SINE Alu -2 307 1 4608 179 60 8 chr15 18971348 18972224 -82408297 - L1MB3 LINE L1 -455 5728 4754 224 30 30 0 chr15 18972431 18972464 -82408057 + (TTTTA)n Simple_repeat Simple_repeat 2 35 0 2378 68 0 0 chr15 18972466 18972747 -82407774 - AluY SINE Alu -26 285 5 489 281 93 56 chr15 18972753 18973202 -82407319 - L1MC5 LINE L1 -179 7782 7317 390 208 32 97 chr15 18973370 18973524 -82406997 - L1MC5 LINE L1 -861 7100 6957 772 244 45 42 chr15 18973574 18973910 -82406611 - L1MB3 LINE L1 -3097 3049 2713 1873 159 0 0 chr15 18976000 18976290 -82404231 + AluJb SINE Alu 1 290 -22 2211 79 0 0 chr15 18976305 18976584 -82403937 + AluSq SINE Alu 9 287 -26 2232 78 3 29 chr15 18980317 18980625 -82399896 - AluSc SINE Alu -9 300 1 2048 227 72 39 chr15 18981094 18981680 -82398841 - MER77 LTR ERV1 0 605 1 1060 256 53 12 chr15 18981834 18982154 -82398367 + MER58B DNA MER1_type 4 336 -5 22 0 0 0 chr15 18982324 18982346 -82398175 + AT_rich Low_complexity Low_complexity 1 22 0 255 61 0 0 chr15 18984722 18984755 -82395766 + (TTTTC)n Simple_repeat Simple_repeat 2 34 0 3588 191 67 67 chr15 18984762 18985581 -82394940 - L1MB5 LINE L1 0 6174 5357 2227 109 0 0 chr15 18985581 18985893 -82394628 - AluSx SINE Alu 0 312 1 3588 191 67 67 chr15 18985893 18986783 -82393738 - L1MB5 LINE L1 -817 5357 4457 1513 221 95 12 chr15 18986788 18987159 -82393362 - L1MB5 LINE L1 -2486 3660 3234 2311 87 0 6 chr15 18987159 18987470 -82393051 - AluSc SINE Alu 0 309 1 1513 221 95 12 chr15 18987470 18987605 -82392916 - L1MB5 LINE L1 -2912 3234 3112 912 196 5 5 chr15 18987610 18987799 -82392722 - AluJb SINE Alu -6 306 118 1390 213 67 13 chr15 18987803 18988253 -82392268 - L1MB5 LINE L1 -3060 3086 2613 1544 148 0 44 chr15 18988386 18988657 -82391864 + AluJb SINE Alu 23 281 -31 225 139 0 0 chr15 18988672 18988715 -82391806 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 369 0 0 0 chr15 18988718 18988759 -82391762 + (TG)n Simple_repeat Simple_repeat 2 42 0 30 59 0 0 chr15 18988759 18988810 -82391711 + AT_rich Low_complexity Low_complexity 1 51 0 1797 272 52 47 chr15 18988810 18989775 -82390746 - HERVL68 LTR ERVL -1920 1117 60 2224 186 107 0 chr15 18989783 18990289 -82390232 - MER68 LTR ERV1 -2 560 1 328 264 107 21 chr15 18990291 18990431 -82390090 - L1ME LINE L1 -339 5782 5631 626 211 55 0 chr15 18993938 18994066 -82386455 + AluJb SINE Alu 174 308 -4 276 75 132 0 chr15 18994066 18994119 -82386402 + L1MC1 LINE L1 6265 6324 -9 1504 166 80 43 chr15 18994496 18994908 -82385613 - MLT1C LTR MaLR 0 467 1 864 236 145 51 chr15 18994908 18995294 -82385227 - MLT1C LTR MaLR -42 425 3 250 307 17 22 chr15 18995628 18995807 -82384714 + (TGAG)n Simple_repeat Simple_repeat 1 178 0 311 323 6 0 chr15 18996122 18996289 -82384232 + (TG)n Simple_repeat Simple_repeat 1 168 0 21 36 0 0 chr15 18996559 18996587 -82383934 + AT_rich Low_complexity Low_complexity 1 28 0 695 167 0 0 chr15 18996773 18996887 -82383634 + FLAM_A SINE Alu 20 133 -9 1997 117 0 19 chr15 18997717 18998025 -82382496 + AluSg SINE Alu 1 302 -8 2113 89 7 13 chr15 18999660 18999964 -82380557 - AluSx SINE Alu -10 302 1 301 264 179 9 chr15 18999987 19000093 -82380428 - L1ME4a LINE L1 -3 6118 5995 353 242 10 0 chr15 19002127 19002226 -82378295 + MER5A DNA MER1_type 10 98 -80 2209 94 0 10 chr15 19002458 19002766 -82377755 + AluY SINE Alu 1 305 -6 1086 96 5 75 chr15 19002766 19002954 -82377567 + AluSg/x SINE Alu 133 307 -3 912 190 194 7 chr15 19003100 19003252 -82377269 + MER2 DNA MER2_type 2 124 -220 2427 75 0 0 chr15 19003252 19003560 -82376961 + AluY SINE Alu 1 308 -3 912 190 194 7 chr15 19003560 19003696 -82376825 + MER2 DNA MER2_type 124 344 0 935 178 40 0 chr15 19004960 19005134 -82375387 + MER58A DNA MER1_type 44 224 0 2069 111 3 3 chr15 19005459 19005757 -82374764 + AluSx SINE Alu 1 298 -14 1131 133 0 0 chr15 19005867 19006033 -82374488 - AluSc SINE Alu -12 297 132 2333 87 0 0 chr15 19006033 19006342 -82374179 - AluY SINE Alu -2 309 1 481 296 65 88 chr15 19007683 19008034 -82372487 - L1MEc LINE L1 -4673 1421 1065 345 273 55 55 chr15 19008037 19008286 -82372235 - L1MEc LINE L1 -5026 1044 793 2221 78 10 0 chr15 19008286 19008581 -82371940 - AluSg SINE Alu -12 298 1 345 273 55 55 chr15 19008581 19008661 -82371860 - L1MEc LINE L1 -5276 794 715 343 239 62 44 chr15 19009346 19009459 -82371062 - L1MEc LINE L1 -5954 116 2 249 311 259 11 chr15 19011502 19011788 -82368733 - L2 LINE L2 -5 3308 2952 408 253 45 62 chr15 19012053 19012342 -82368179 - L1MC5 LINE L1 -184 7777 7494 1161 178 201 22 chr15 19012347 19012505 -82368016 - MLT1B LTR MaLR 0 374 246 2057 108 7 0 chr15 19012505 19012802 -82367719 - AluSx SINE Alu -9 303 5 1161 178 201 22 chr15 19012802 19012959 -82367562 - MLT1B LTR MaLR -128 246 15 339 291 109 11 chr15 19012975 19013150 -82367371 - L1MC5 LINE L1 -465 7496 7305 514 308 169 17 chr15 19013284 19013752 -82366769 - L1MC5 LINE L1 -735 7226 6688 1854 162 3 0 chr15 19013759 19014055 -82366466 - AluJb SINE Alu -15 297 1 1412 207 223 24 chr15 19014673 19015184 -82365337 - MER90 LTR ERV1 0 614 2 1838 100 12 0 chr15 19015190 19015449 -82365072 - AluSq SINE Alu -51 262 1 589 217 95 59 chr15 19016042 19016263 -82364258 - L1MC5 LINE L1 -53 7908 7680 1733 191 48 18 chr15 19017055 19017447 -82363074 - L1MB4 LINE L1 0 6180 5777 1182 121 0 0 chr15 19017447 19017620 -82362901 - AluSg/x SINE Alu -17 293 121 21 0 0 0 chr15 19017621 19017642 -82362879 + AT_rich Low_complexity Low_complexity 1 21 0 388 285 66 79 chr15 19017669 19017851 -82362670 - L1MDa LINE L1 -4157 2383 2203 2125 115 0 0 chr15 19017851 19018147 -82362374 - AluSx SINE Alu -16 296 1 388 285 66 79 chr15 19018147 19018192 -82362329 - L1MDa LINE L1 -4337 2203 2159 1856 36 0 9 chr15 19018321 19018574 -82361947 - AluY SINE Alu 0 309 59 395 22 0 0 chr15 19118807 19118852 -82261669 + (TC)n Simple_repeat Simple_repeat 2 46 0 1170 121 0 12 chr15 19120896 19121069 -82259452 + AluSg/x SINE Alu 86 256 -56 5123 221 51 21 chr15 19121069 19121163 -82259358 + L1M2c LINE L1 11 101 -6688 1983 104 24 3 chr15 19121163 19121450 -82259071 + AluY SINE Alu 1 293 -18 5123 221 51 21 chr15 19121450 19122519 -82258002 + L1M2c LINE L1 101 1209 -5580 21 0 0 0 chr15 19122665 19122686 -82257835 + GC_rich Low_complexity Low_complexity 1 21 0 782 234 88 68 chr15 19123623 19123700 -82256821 + L1MEc LINE L1 1978 2052 -4344 2188 92 0 3 chr15 19123700 19123995 -82256526 + AluSx SINE Alu 1 294 -18 782 234 88 68 chr15 19123995 19124296 -82256225 + L1MEc LINE L1 2052 2373 -4023 2070 122 3 3 chr15 19124296 19124600 -82255921 + AluSp SINE Alu 1 304 -9 782 234 88 68 chr15 19124600 19124753 -82255768 + L1MEc LINE L1 2373 2521 -3875 1602 109 26 4 chr15 19124778 19125007 -82255514 + AluSx SINE Alu 1 234 -78 984 117 0 0 chr15 19125007 19125144 -82255377 + AluSp/q SINE Alu 170 306 -7 301 285 62 17 chr15 19125129 19125308 -82255213 + L1MEc LINE L1 2495 2681 -3534 * 309 261 11 0 chr15 19125440 19125528 -82254993 + L1MEc LINE L1 2758 2846 -3369 695 188 0 45 chr15 19125531 19125685 -82254836 - MER44D DNA MER2_type 0 609 463 731 190 0 0 chr15 19125685 19125806 -82254715 + AluSg/x SINE Alu 156 276 -36 180 0 0 0 chr15 19125827 19125847 -82254674 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 543 127 100 0 chr15 19125847 19125957 -82254564 - MER44D DNA MER2_type -138 467 347 348 185 0 0 chr15 19125976 19126030 -82254491 + MER44D DNA MER2_type 38 361 -248 449 68 17 0 chr15 19126053 19126367 -82254154 + AluYb8 SINE Alu 2 316 0 346 231 0 39 chr15 19126368 19126472 -82254049 + L1M3 LINE L1 97 196 -6663 * 1202 229 64 44 chr15 19126442 19126549 -82253972 + L1M3 LINE L1 5605 5708 -1249 2238 120 3 0 chr15 19126549 19126849 -82253672 + AluSx SINE Alu 1 301 -11 1202 229 64 44 chr15 19126849 19127286 -82253235 + L1M3 LINE L1 5708 6160 -797 844 196 33 76 chr15 19127280 19127420 -82253101 + L1ME3 LINE L1 5564 5688 -476 * 2495 87 3 0 chr15 19127420 19127729 -82252792 - AluSp SINE Alu -3 310 1 844 196 33 76 chr15 19127729 19127864 -82252657 + L1ME3 LINE L1 5688 5827 -337 1112 74 0 27 chr15 19127930 19128063 -82252458 + AluSg/x SINE Alu 167 297 -15 2511 87 0 3 chr15 19128063 19128373 -82252148 + AluY SINE Alu 1 309 -2 1112 74 0 27 chr15 19128373 19128388 -82252133 + AluSg/x SINE Alu 297 311 -1 540 157 41 6 chr15 19128389 19128501 -82252020 + L1M3 LINE L1 6297 6396 -598 422 230 43 123 chr15 19128496 19128666 -82251855 + L1ME3 LINE L1 5813 5931 -231 * 2388 105 0 3 chr15 19128666 19128971 -82251550 + AluSx SINE Alu 1 304 -8 422 230 43 123 chr15 19128971 19129113 -82251408 + L1ME3 LINE L1 5931 6083 -79 505 218 8 45 chr15 19129113 19129246 -82251275 - MLT2C1 LTR ERVL 0 397 270 2396 90 0 10 chr15 19129262 19129572 -82250949 + AluSp SINE Alu 1 307 -6 1574 174 15 47 chr15 19129703 19129826 -82250695 + MLT1A1 LTR MaLR 38 163 -202 2703 58 0 0 chr15 19129826 19130135 -82250386 + AluY SINE Alu 1 309 -2 1574 174 15 47 chr15 19130135 19130350 -82250171 + MLT1A1 LTR MaLR 163 365 0 438 301 139 26 chr15 19130352 19130661 -82249860 + MLT1C LTR MaLR 72 415 -52 2507 50 0 10 chr15 19130663 19130961 -82249560 + AluY SINE Alu 1 295 -16 1389 191 14 11 chr15 19137792 19138075 -82242446 + MSTB1 LTR MaLR 149 432 0 2099 143 3 0 chr15 19138235 19138535 -82241986 - AluSx SINE Alu -11 301 1 1956 163 16 7 chr15 19138912 19139219 -82241302 - AluJb SINE Alu -2 310 1 1446 196 43 47 chr15 19139499 19139800 -82240721 + AluSx SINE Alu 1 300 -12 2246 104 24 0 chr15 19140169 19140456 -82240065 + AluSx SINE Alu 1 294 -18 2664 49 0 3 chr15 19141571 19141878 -82238643 - AluY SINE Alu -5 306 1 869 228 22 22 chr15 19142100 19142332 -82238189 + L1M1 LINE L1 13 244 -7321 2239 90 17 7 chr15 19142433 19142722 -82237799 + AluSx SINE Alu 2 293 -19 1207 155 0 0 chr15 19142722 19142896 -82237625 + AluJb SINE Alu 134 307 -5 2238 114 0 7 chr15 19143017 19143314 -82237207 - AluSx SINE Alu -16 296 2 2319 123 0 3 chr15 19143432 19143740 -82236781 + AluSg SINE Alu 1 307 -3 403 243 195 5 chr15 19143766 19143868 -82236653 + L1ME2 LINE L1 5010 5091 -1055 2431 94 0 0 chr15 19143868 19144167 -82236354 + AluSx SINE Alu 1 299 -13 403 243 195 5 chr15 19144167 19144249 -82236272 + L1ME2 LINE L1 5091 5229 -917 1469 178 16 52 chr15 19144365 19144560 -82235961 - AluJb SINE Alu -14 298 116 1942 170 0 6 chr15 19144560 19144872 -82235649 + AluSx SINE Alu 1 310 -2 1469 178 16 52 chr15 19144872 19144985 -82235536 - AluJb SINE Alu -196 116 1 1861 248 112 6 chr15 19145030 19145658 -82234863 + L1ME2 LINE L1 5417 6110 -54 385 198 12 0 chr15 19145656 19145737 -82234784 + L1ME1 LINE L1 5487 5568 -598 * 445 117 0 0 chr15 19145747 19145824 -82234697 - AluS SINE Alu -4 306 230 1975 149 0 0 chr15 19146061 19146386 -82234135 - AluSx SINE Alu 0 325 1 722 126 24 31 chr15 19146387 19146514 -82234007 - AluJo/FLAM SINE Alu -185 127 2 1105 180 60 85 chr15 19146516 19146832 -82233689 + L1ME1 LINE L1 5552 5859 -307 2195 123 3 7 chr15 19146958 19147260 -82233261 + AluSq SINE Alu 1 301 -12 1333 172 121 8 chr15 19147373 19147505 -82233016 + AluSg SINE Alu 7 123 -187 2585 73 0 13 chr15 19147505 19147819 -82232702 + AluSx SINE Alu 3 312 0 1333 172 121 8 chr15 19147819 19147942 -82232579 + AluSg SINE Alu 123 291 -19 2352 90 0 0 chr15 19147950 19148239 -82232282 + AluSg SINE Alu 1 289 -21 810 293 56 23 chr15 19148328 19148788 -82231733 - MLT1C-int LTR MaLR -757 614 5 201 147 0 0 chr15 19148844 19148878 -82231643 + (TA)n Simple_repeat Simple_repeat 2 35 0 387 279 25 41 chr15 19148901 19149148 -82231373 - MLT2F LTR ERVL -49 614 292 3113 154 42 2 chr15 19149156 19149702 -82230819 + LTR24B LTR ERV1 2 569 -7 238 291 97 8 chr15 19149780 19149914 -82230607 - MLT2F LTR ERVL -517 146 1 2319 79 14 3 chr15 19149952 19150244 -82230277 + AluSx SINE Alu 1 295 -17 791 269 109 22 chr15 19150273 19150633 -82229888 - MLT1C LTR MaLR -7 460 69 708 145 53 0 chr15 19150633 19150764 -82229757 - MLT1A1 LTR MaLR 0 365 228 283 138 15 15 chr15 19151062 19151127 -82229394 + GA-rich Low_complexity Low_complexity 3 67 0 712 169 15 0 chr15 19151672 19151802 -82228719 + FLAM_C SINE Alu 1 132 -1 309 122 0 0 chr15 19151830 19151879 -82228642 + Ricksha DNA DNA 295 343 -1703 580 256 47 21 chr15 19151881 19152115 -82228406 + MLT2C2 LTR ERVL 1 240 -224 558 191 56 93 chr15 19152090 19152305 -82228216 + MLT1D LTR MaLR 7 213 -292 * 265 152 315 0 chr15 19155135 19155227 -82225294 + FLAM_C SINE Alu 1 121 -12 22 0 0 0 chr15 19155227 19155249 -82225272 + AT_rich Low_complexity Low_complexity 1 22 0 1982 57 0 0 chr15 19156210 19156439 -82224082 + AluY SINE Alu 1 229 -82 1392 194 123 5 chr15 19156443 19156824 -82223697 + Charlie4a DNA MER1_type 83 508 0 1828 208 2 45 chr15 19157734 19158133 -82222388 - MER77 LTR ERV1 -4 601 220 237 315 31 47 chr15 19158294 19158421 -82222100 + L2 LINE L2 3146 3270 -43 2023 145 9 9 chr15 19158563 19158900 -82221621 + MER1B DNA MER1_type 1 337 0 2246 117 0 7 chr15 19158924 19159223 -82221298 - AluSx SINE Alu -10 302 6 1141 200 90 10 chr15 19159227 19159429 -82221092 - L1MCa LINE L1 -2798 3628 3444 1644 110 141 0 chr15 19159429 19159692 -82220829 - AluSx SINE Alu -2 300 1 1141 200 90 10 chr15 19159692 19159965 -82220556 - L1MCa LINE L1 -2982 3444 855 590 286 102 79 chr15 19159985 19160328 -82220193 - MER77 LTR ERV1 -254 351 1 697 280 170 13 chr15 19160329 19160697 -82219824 + L1MC/D LINE L1 5254 5710 -2098 2156 125 0 3 chr15 19160697 19160992 -82219529 + AluSg SINE Alu 1 294 -16 697 280 170 13 chr15 19160992 19161083 -82219438 + L1MC/D LINE L1 5710 5785 -2023 1001 190 49 19 chr15 19161709 19162008 -82218513 - MER2 DNA MER2_type -2 343 1 24 53 0 0 chr15 19162104 19162142 -82218379 + AT_rich Low_complexity Low_complexity 1 38 0 677 125 39 55 chr15 19162513 19162641 -82217880 + FLAM_C SINE Alu 2 127 -16 1975 134 7 17 chr15 19162658 19162957 -82217564 + AluSx SINE Alu 3 298 -14 22 0 0 0 chr15 19163654 19163676 -82216845 + AT_rich Low_complexity Low_complexity 1 22 0 455 132 0 0 chr15 19163693 19163769 -82216752 + AluJ/FRAM SINE Alu 229 304 -8 585 139 0 0 chr15 19163769 19163855 -82216666 - MER2 DNA MER2_type -213 132 47 1585 273 50 7 chr15 19163955 19164417 -82216104 + L1M1 LINE L1 269 750 -6815 1319 141 69 40 chr15 19164417 19164693 -82215828 + LTR19A LTR ERV1 1 284 -202 8631 189 46 50 chr15 19164695 19164826 -82215695 + L1M1 LINE L1 2184 2314 -5251 402 174 0 14 chr15 19164826 19164922 -82215599 - AluS SINE Alu 0 302 230 8631 189 46 50 chr15 19164922 19165729 -82214792 + L1M1 LINE L1 2314 3122 -4443 1734 161 8 0 chr15 19165729 19165990 -82214531 + AluSx SINE Alu 35 297 -15 2481 81 0 0 chr15 19165996 19166293 -82214228 + AluY SINE Alu 1 297 -14 8631 189 46 50 chr15 19166293 19166790 -82213731 + L1M1 LINE L1 3127 3624 -3941 2129 127 10 10 chr15 19166790 19167098 -82213423 + AluSq SINE Alu 1 308 -5 8631 189 46 50 chr15 19167098 19167903 -82212618 + L1M1 LINE L1 3624 4430 -3135 1838 155 0 57 chr15 19167903 19168219 -82212302 + AluJb SINE Alu 1 298 -14 8631 189 46 50 chr15 19168219 19169450 -82211071 + L1M1 LINE L1 4430 5721 -1844 1069 134 6 0 chr15 19169450 19169607 -82210914 + AluSx SINE Alu 1 158 -154 2044 131 3 0 chr15 19177001 19177306 -82203215 + AluSq SINE Alu 1 306 -7 273 185 0 62 chr15 19177306 19177381 -82203140 - L1M4 LINE L1 -1532 4614 4545 432 273 118 68 chr15 19177412 19178093 -82202428 - L1M4 LINE L1 -1665 4481 3767 1219 153 0 40 chr15 19178121 19178349 -82202172 - AluJo SINE Alu -9 303 85 260 285 105 40 chr15 19178440 19178668 -82201853 - L1M4 LINE L1 -2467 3679 3437 1336 195 36 20 chr15 19178749 19179051 -82201470 - AluJb SINE Alu -4 308 2 462 159 0 65 chr15 19179432 19179539 -82200982 - AluJb SINE Alu -3 309 210 1948 134 0 28 chr15 19179550 19179871 -82200650 - AluSx SINE Alu 0 312 1 25 75 0 0 chr15 19179896 19179949 -82200572 + AT_rich Low_complexity Low_complexity 1 53 0 2262 75 3 0 chr15 19180673 19180966 -82199555 - AluY SINE Alu -12 299 6 1850 139 7 14 chr15 19181324 19181619 -82198902 + AluJb SINE Alu 5 297 -15 24 32 0 0 chr15 19182171 19182202 -82198319 + AT_rich Low_complexity Low_complexity 1 31 0 31 0 0 0 chr15 19182698 19182729 -82197792 + AT_rich Low_complexity Low_complexity 1 31 0 540 234 98 33 chr15 19182983 19183167 -82197354 - L1MC4a LINE L1 -1969 5839 5644 1481 119 155 0 chr15 19183169 19183420 -82197101 - AluY SINE Alu -7 304 15 289 338 89 19 chr15 19183443 19183656 -82196865 - L1MC4a LINE L1 -2156 5652 5425 696 239 41 82 chr15 19183687 19184005 -82196516 - L1MD2 LINE L1 -55 6304 6000 400 253 75 29 chr15 19184043 19184217 -82196304 - L1MC4a LINE L1 -2373 5435 5254 889 177 51 95 chr15 19184830 19185040 -82195481 + L1MB2 LINE L1 5900 6091 -80 874 146 0 0 chr15 19185040 19185163 -82195358 + FLAM_C SINE Alu 1 123 -10 889 177 51 95 chr15 19185163 19185241 -82195280 + L1MB2 LINE L1 6091 6171 0 1446 177 0 71 chr15 19185251 19185404 -82195117 + AluJb SINE Alu 1 122 -190 1574 81 28 0 chr15 19185404 19185615 -82194906 + AluSg/x SINE Alu 70 286 -24 1446 177 0 71 chr15 19185615 19185771 -82194750 + AluJb SINE Alu 122 288 -24 2135 100 16 13 chr15 19185907 19186085 -82194436 - AluSg SINE Alu 0 310 129 2176 100 0 13 chr15 19186085 19186395 -82194126 - AluSg SINE Alu -4 306 1 2135 100 16 13 chr15 19186395 19186525 -82193996 - AluSg SINE Alu -181 129 1 235 196 39 0 chr15 19186631 19186682 -82193839 - MER94 DNA DNA -81 53 1 2140 98 10 7 chr15 19186700 19187005 -82193516 - AluSc SINE Alu -2 307 2 5753 112 61 6 chr15 19189061 19189526 -82190995 - L1MA5A LINE L1 -2 6295 5857 213 39 0 0 chr15 19189526 19189552 -82190969 + (TA)n Simple_repeat Simple_repeat 2 27 0 5753 112 61 6 chr15 19189552 19190008 -82190513 - L1MA5A LINE L1 -440 5857 5320 2148 112 0 3 chr15 19190008 19190311 -82190210 - AluSq SINE Alu -11 302 1 2621 155 57 38 chr15 19190311 19190835 -82189686 - L1M2c LINE L1 -4886 1903 1370 481 118 0 129 chr15 19190836 19190872 -82189649 + AluS SINE Alu 2 41 -272 1919 145 7 0 chr15 19190872 19191162 -82189359 - AluSx SINE Alu -20 292 1 481 118 0 129 chr15 19191162 19191218 -82189303 + AluS SINE Alu 41 82 -231 1634 144 27 27 chr15 19191323 19191622 -82188899 - AluJb SINE Alu -11 301 3 2137 82 3 20 chr15 19191647 19191941 -82188580 + AluSq SINE Alu 1 289 -24 365 262 107 77 chr15 19191947 19192115 -82188406 - L1MCa LINE L1 -4352 2074 1902 1902 136 3 10 chr15 19192446 19192755 -82187766 - AluSx SINE Alu 0 312 6 2336 65 0 0 chr15 19193889 19194183 -82186338 + AluY SINE Alu 1 294 -17 322 214 111 79 chr15 19194238 19194364 -82186157 + L1ME4a LINE L1 5960 6089 -32 232 232 136 40 chr15 19194801 19194899 -82185622 - MIR SINE MIR -28 234 120 2099 93 31 0 chr15 19194899 19195188 -82185333 + AluSq SINE Alu 1 298 -15 232 232 136 40 chr15 19195188 19195214 -82185307 - MIR SINE MIR -142 120 98 899 158 0 0 chr15 19195254 19195387 -82185134 + FLAM_C SINE Alu 1 133 0 220 365 51 15 chr15 19195896 19196033 -82184488 + L2 LINE L2 3172 3313 0 1946 66 73 4 chr15 19196056 19196328 -82184193 - AluY SINE Alu -19 292 2 214 193 193 18 chr15 19196511 19196568 -82183953 + MIR SINE MIR 163 229 -33 470 314 88 18 chr15 19198274 19198548 -82181973 - MARNA DNA Mariner -168 418 126 1693 166 3 25 chr15 19199504 19199823 -82180698 + AluJo SINE Alu 1 312 0 704 136 0 0 chr15 19200468 19200571 -82179950 + FLAM_A SINE Alu 28 130 -12 470 314 136 34 chr15 19201394 19201805 -82178716 + L1MC5 LINE L1 7479 7931 -30 2130 88 7 17 chr15 19201813 19202110 -82178411 + AluSp SINE Alu 1 294 -19 2052 115 0 0 chr15 19202113 19202409 -82178112 + AluSx SINE Alu 1 296 -16 1766 140 25 3 chr15 19203249 19203534 -82176987 + AluSx SINE Alu 1 291 -21 1679 176 0 0 chr15 19203755 19204045 -82176476 + AluJb SINE Alu 1 290 -22 700 209 7 14 chr15 19204397 19204536 -82175985 + AluJo SINE Alu 2 139 -173 2240 89 0 13 chr15 19204539 19204852 -82175669 + AluSx SINE Alu 1 309 -3 290 239 23 23 chr15 19204878 19204966 -82175555 + L1M4 LINE L1 5010 5097 -1049 36 82 0 0 chr15 19205191 19205276 -82175245 + GC_rich Low_complexity Low_complexity 1 85 0 256 197 16 0 chr15 19206591 19206652 -82173869 - L1ME LINE L1 -264 5902 5841 334 238 30 109 chr15 19206978 19207028 -82173493 - L1MC4a LINE L1 -1965 5843 5791 2068 128 0 3 chr15 19207028 19207341 -82173180 - AluSx SINE Alu 0 312 1 334 238 30 109 chr15 19207341 19207492 -82173029 - L1MC4a LINE L1 -2017 5791 5658 2217 85 0 0 chr15 19207532 19207858 -82172663 - AluSq SINE Alu 0 330 5 871 208 38 0 chr15 19208000 19208183 -82172338 + L1M4 LINE L1 4130 4319 -1827 2349 73 3 0 chr15 19208193 19208493 -82172028 - AluSp SINE Alu -12 301 1 1486 169 59 53 chr15 19208586 19208923 -82171598 - MER44D DNA MER2_type 0 609 1 696 244 85 36 chr15 19208923 19208955 -82171566 + L1M4 LINE L1 4338 4367 -1779 2382 67 0 0 chr15 19208955 19209253 -82171268 + AluSg SINE Alu 1 298 -12 696 244 85 36 chr15 19209253 19209502 -82171019 + L1M4 LINE L1 4367 4633 -1513 225 156 16 47 chr15 19209515 19209579 -82170942 - L1ME1 LINE L1 0 6166 6105 337 213 0 0 chr15 19209590 19209644 -82170877 - Tigger2 DNA MER2_type -16 2702 2646 1934 105 7 20 chr15 19209644 19209938 -82170583 - AluSq SINE Alu -23 290 1 1339 62 150 0 chr15 19209945 19210138 -82170383 - AluSg/x SINE Alu -6 306 85 2112 151 16 13 chr15 19210177 19210549 -82169972 - Tigger2 DNA MER2_type -73 2645 2273 402 191 0 0 chr15 19210538 19210606 -82169915 - Tigger2 DNA MER2_type -2649 69 2 * 1891 127 10 10 chr15 19210663 19210963 -82169558 - AluSx SINE Alu -12 300 1 713 157 37 30 chr15 19210977 19211111 -82169410 - AluJo SINE Alu -176 136 2 2929 140 55 2 chr15 19211116 19211739 -82168782 - L1M2 LINE L1 -529 5762 5102 1012 166 5 7 chr15 19211752 19211960 -82168561 + L1MA6 LINE L1 5879 6076 -236 380 129 7 201 chr15 19211933 19212072 -82168449 + L1MB8 LINE L1 5927 6038 -140 * 1593 150 32 54 chr15 19212075 19212257 -82168264 - AluJb SINE Alu -6 306 132 2154 103 0 0 chr15 19212257 19212549 -82167972 - AluSx SINE Alu -12 300 9 1593 150 32 54 chr15 19212549 19212679 -82167842 - AluJb SINE Alu -180 132 1 2492 166 7 18 chr15 19212679 19212950 -82167571 - L1M2 LINE L1 -1131 5015 4750 2326 78 0 3 chr15 19212950 19213257 -82167264 - AluSx SINE Alu -6 306 1 2492 166 7 18 chr15 19213257 19213443 -82167078 - L1M2 LINE L1 -1396 4750 4563 277 54 0 0 chr15 19213483 19213520 -82167001 - L1M2 LINE L1 -1552 4594 4558 1456 167 6 63 chr15 19213523 19213705 -82166816 - AluJo SINE Alu -13 299 141 2057 114 9 19 chr15 19213705 19214020 -82166501 - AluSp SINE Alu -1 312 1 1456 167 6 63 chr15 19214020 19214154 -82166367 - AluJo SINE Alu -171 141 1 3061 195 27 104 chr15 19214154 19214326 -82166195 - L1M4 LINE L1 -1009 5137 4953 2195 83 0 0 chr15 19214326 19214616 -82165905 - AluY SINE Alu -21 290 1 3061 195 27 104 chr15 19214616 19215445 -82165076 - L1M4 LINE L1 -1193 4953 4213 830 226 62 34 chr15 19215479 19215805 -82164716 - L1MEc LINE L1 -3730 2416 2110 2315 154 42 27 chr15 19216802 19217210 -82163311 - MLT2D LTR ERVL 0 414 1 1996 104 0 0 chr15 19217246 19217526 -82162995 - AluSx SINE Alu -1 311 32 856 120 32 0 chr15 19217528 19217653 -82162868 - AluJo/FLAM SINE Alu -173 129 1 2055 148 44 31 chr15 19218800 19219021 -82161500 - MLT1B LTR MaLR 0 390 160 2123 65 3 77 chr15 19219021 19219344 -82161177 - AluSp SINE Alu -14 299 1 2055 148 44 31 chr15 19219344 19219507 -82161014 - MLT1B LTR MaLR -230 160 1 1226 214 65 0 chr15 19219745 19219985 -82160536 - Tigger3(Golem) DNA MER2_type 0 3028 2770 1817 117 0 0 chr15 19219985 19220232 -82160289 - AluSx SINE Alu -63 249 3 315 0 0 0 chr15 19220339 19220374 -82160147 + (CA)n Simple_repeat Simple_repeat 2 36 0 1249 106 17 0 chr15 19220374 19220554 -82159967 + L1MA7 LINE L1 5794 5976 -315 317 260 57 32 chr15 19220571 19220694 -82159827 + MIR3 SINE MIR 33 158 -50 564 127 15 8 chr15 19221002 19221136 -82159385 + (TG)n Simple_repeat Simple_repeat 1 135 0 572 176 8 8 chr15 19221240 19221365 -82159156 + L1MA8 LINE L1 6155 6279 -12 531 0 0 0 chr15 19221852 19221911 -82158610 + (TTATG)n Simple_repeat Simple_repeat 2 60 0 1834 107 59 0 chr15 19221911 19222182 -82158339 - AluSp SINE Alu -26 287 1 353 237 13 0 chr15 19222282 19222358 -82158163 - L1MC4 LINE L1 -184 7858 7782 2223 98 0 16 chr15 19222702 19223019 -82157502 + AluSp SINE Alu 1 312 -1 339 289 81 57 chr15 19223644 19223725 -82156796 + L1MC/D LINE L1 5290 5368 -2440 1727 166 7 7 chr15 19223725 19224026 -82156495 + AluJb SINE Alu 1 301 -11 339 289 81 57 chr15 19224026 19224084 -82156437 + L1MC/D LINE L1 5368 5423 -2385 1989 102 7 3 chr15 19224084 19224409 -82156112 + AluSx SINE Alu 1 326 0 339 289 81 57 chr15 19224409 19224478 -82156043 + L1MC/D LINE L1 5423 5505 -2303 2140 104 36 0 chr15 19227035 19227313 -82153208 + AluSq SINE Alu 16 303 -10 2532 61 0 0 chr15 19227757 19228051 -82152470 - AluY SINE Alu -17 294 1 1178 52 0 0 chr15 19228051 19228185 -82152336 - AluY SINE Alu -177 134 1 225 108 0 0 chr15 19228888 19228925 -82151596 + (CA)n Simple_repeat Simple_repeat 2 38 0 2096 122 38 0 chr15 19229183 19229470 -82151051 - AluSx SINE Alu -14 298 1 716 163 205 6 chr15 19231057 19231223 -82149298 - MLT1B LTR MaLR 0 390 192 2564 55 7 7 chr15 19231323 19231632 -82148889 - AluY SINE Alu -2 309 1 1730 151 46 57 chr15 19232674 19232730 -82147791 - L1MB3 LINE L1 -2 6181 6126 2181 104 0 20 chr15 19232730 19233028 -82147493 - AluSg SINE Alu -14 296 5 1730 151 46 57 chr15 19233028 19233395 -82147126 - L1MB3 LINE L1 -57 6126 5764 968 228 199 3 chr15 19234286 19234593 -82145928 - Tigger7 DNA MER2_type 0 2487 2121 1267 239 3 7 chr15 19234594 19234883 -82145638 - Tigger7 DNA MER2_type -2196 291 4 747 255 74 30 chr15 19234887 19235413 -82145108 - L1MDb LINE L1 -3630 2776 2222 650 153 0 27 chr15 19235426 19235537 -82144984 - FLAM_A SINE Alu -13 129 22 246 251 36 84 chr15 19235545 19235712 -82144809 - L1MDb LINE L1 -4170 2236 2078 1263 239 131 40 chr15 19236222 19237069 -82143452 - L1MDb LINE L1 -4779 1627 748 316 303 87 84 chr15 19238697 19238756 -82141765 - L1ME4a LINE L1 -168 5953 5896 2257 117 0 0 chr15 19238756 19239047 -82141474 - AluSx SINE Alu -21 291 1 316 303 87 84 chr15 19239047 19239078 -82141443 - L1ME4a LINE L1 -225 5896 5867 1958 145 13 7 chr15 19239078 19239381 -82141140 - AluJb SINE Alu -5 307 3 316 303 87 84 chr15 19239381 19239523 -82140998 - L1ME4a LINE L1 -254 5867 5716 2344 79 3 30 chr15 19239523 19239828 -82140693 + AluSx SINE Alu 1 297 -15 316 303 87 84 chr15 19239828 19239916 -82140605 - L1ME4a LINE L1 -405 5716 5630 2472 102 0 0 chr15 19241145 19241450 -82139071 - AluSx SINE Alu -7 305 1 1952 147 3 33 chr15 19244045 19244352 -82136169 + AluJo SINE Alu 1 298 -14 2040 124 17 7 chr15 19244357 19244648 -82135873 - AluSx SINE Alu -18 294 1 873 266 82 43 chr15 19244682 19245171 -82135350 - MLT1J LTR MaLR 0 511 4 216 0 0 0 chr15 19245825 19245849 -82134672 + (T)n Simple_repeat Simple_repeat 1 24 0 1831 159 6 41 chr15 19246463 19246778 -82133743 - AluJo SINE Alu 0 312 9 1707 177 10 13 chr15 19246780 19247085 -82133436 - AluJo SINE Alu -8 304 1 267 326 88 42 chr15 19247367 19247503 -82133018 + MER3 DNA MER1_type 2 151 -58 2329 93 3 19 chr15 19247503 19247813 -82132708 + AluSx SINE Alu 1 305 -7 267 326 88 42 chr15 19247813 19247869 -82132652 + MER3 DNA MER1_type 151 203 -6 * 294 62 0 42 chr15 19247867 19247915 -82132606 + MADE1 DNA Mariner 34 79 -1 533 330 28 1 chr15 19248440 19248730 -82131791 - L1ME3A LINE L1 -167 5995 5700 306 286 91 74 chr15 19248741 19249150 -82131371 - L1ME3A LINE L1 -513 5657 5257 1296 184 131 4 chr15 19249150 19249417 -82131104 - AluJo SINE Alu -1 301 1 306 286 91 74 chr15 19249417 19249467 -82131054 - L1ME3A LINE L1 -913 5257 5209 1401 183 39 10 chr15 19249467 19249779 -82130742 - L1MA9 LINE L1 0 6312 5992 306 286 91 74 chr15 19249779 19250609 -82129912 - L1ME3A LINE L1 -961 5209 4323 2306 90 6 22 chr15 19250609 19250921 -82129600 + AluSc SINE Alu 1 307 -2 2653 68 3 0 chr15 19250922 19251232 -82129289 + AluY SINE Alu 1 311 0 725 184 77 41 chr15 19251726 19251793 -82128728 - MER3 DNA MER1_type -6 203 140 2725 40 0 0 chr15 19251793 19252097 -82128424 + AluY SINE Alu 1 304 -7 725 184 77 41 chr15 19252097 19252225 -82128296 - MER3 DNA MER1_type -69 140 1 2018 135 0 14 chr15 19252277 19252573 -82127948 + AluJo SINE Alu 5 296 -16 309 317 10 0 chr15 19252695 19252799 -82127722 + MER63 DNA MER1_type 142 246 -815 610 246 108 10 chr15 19252837 19253032 -82127489 - MER58C DNA MER1_type 0 215 2 1712 185 45 0 chr15 19253293 19253623 -82126898 - MER7A DNA MER2_type -3 343 1 216 0 0 0 chr15 19253696 19253720 -82126801 + (T)n Simple_repeat Simple_repeat 1 24 0 2223 151 17 14 chr15 19254426 19254842 -82125679 - Tigger3(Golem) DNA MER2_type -336 2693 2277 495 280 16 0 chr15 19254814 19254939 -82125582 - Tigger3(Golem) DNA MER2_type -2902 127 1 * 1944 62 48 140 chr15 19254994 19255330 -82125191 - AluY SINE Alu -6 305 1 2595 50 0 3 chr15 19255453 19255753 -82124768 - AluY SINE Alu -12 299 1 2363 106 0 3 chr15 19255753 19256055 -82124466 - AluSc SINE Alu -8 301 1 2177 112 3 16 chr15 19256166 19256469 -82124052 - AluSq SINE Alu -14 299 1 313 213 53 75 chr15 19256604 19256698 -82123823 - L1MC4a LINE L1 -1632 6176 6085 1944 69 15 15 chr15 19256957 19257262 -82123259 - AluY SINE Alu 0 311 42 1555 167 17 43 chr15 19257743 19257899 -82122622 - AluJo SINE Alu -20 292 146 2459 81 0 10 chr15 19257899 19258209 -82122312 - AluSq SINE Alu -6 307 1 1555 167 17 43 chr15 19258209 19258352 -82122169 - AluJo SINE Alu -166 146 1 903 224 42 8 chr15 19258393 19258656 -82121865 - L1MA4 LINE L1 -2 6298 6027 887 169 7 0 chr15 19258880 19259016 -82121505 - AluJo SINE Alu -175 137 1 233 292 11 0 chr15 19259812 19259901 -82120620 - L1M4 LINE L1 -1014 5132 5043 265 251 190 39 chr15 19259983 19260262 -82120259 - L1M4 LINE L1 -1273 4873 4553 352 219 68 0 chr15 19260273 19260346 -82120175 - MER2 DNA MER2_type 0 345 268 1475 164 0 0 chr15 19260397 19260617 -82119904 - AluJb SINE Alu -92 220 1 3556 185 58 47 chr15 19260688 19260964 -82119557 - L1MB8 LINE L1 -27 6151 5879 2209 133 0 0 chr15 19260964 19261265 -82119256 - AluSx SINE Alu -11 301 1 3556 185 58 47 chr15 19261265 19261435 -82119086 - L1MB8 LINE L1 -299 5879 5712 1988 171 10 0 chr15 19261435 19261744 -82118777 - AluJo SINE Alu 0 312 1 3556 185 58 47 chr15 19261744 19262396 -82118125 - L1MB8 LINE L1 -466 5712 5068 2385 110 0 0 chr15 19262396 19262697 -82117824 - AluSx SINE Alu -11 301 1 3556 185 58 47 chr15 19262697 19262792 -82117729 - L1MB8 LINE L1 -1110 5068 4975 1636 234 88 47 chr15 19262792 19263373 -82117148 - MER77 LTR ERV1 0 605 1 3556 185 58 47 chr15 19263373 19263534 -82116987 - L1MB8 LINE L1 -1203 4975 4784 677 293 129 38 chr15 19263537 19263618 -82116903 - L1MB8 LINE L1 -2792 3354 3282 1597 106 204 4 chr15 19263618 19263873 -82116648 - AluSx SINE Alu -6 306 1 677 293 129 38 chr15 19263873 19263979 -82116542 - L1MB8 LINE L1 -2864 3282 3187 2269 112 0 10 chr15 19263979 19264317 -82116204 - AluSg SINE Alu 0 310 3 677 293 129 38 chr15 19264317 19264545 -82115976 - L1MB8 LINE L1 -2959 3187 2900 1197 154 0 16 chr15 19265059 19265247 -82115274 + AluJo SINE Alu 121 305 -7 386 293 0 15 chr15 19265630 19265763 -82114758 - AluSq/x SINE Alu -171 131 1 1928 143 4 4 chr15 19265933 19266212 -82114309 - AluJo SINE Alu -33 279 1 2388 103 0 0 chr15 19270182 19270484 -82110037 - AluSg SINE Alu -8 302 1 1935 117 28 24 chr15 19270532 19270822 -82109699 + AluJo SINE Alu 6 296 -16 879 158 168 11 chr15 19271343 19271533 -82108988 + AluJo SINE Alu 88 307 -5 207 69 0 0 chr15 19272318 19272347 -82108174 + (T)n Simple_repeat Simple_repeat 1 29 0 2475 97 3 0 chr15 19272397 19272706 -82107815 - AluSx SINE Alu -2 310 1 1670 164 0 36 chr15 19272733 19273013 -82107508 - AluJb SINE Alu -16 296 27 1778 151 14 17 chr15 19273025 19273316 -82107205 - AluJb SINE Alu -22 290 1 263 309 73 0 chr15 19274069 19274192 -82106329 - L1ME LINE L1 -393 5728 5597 662 147 217 7 chr15 19274752 19274895 -82105626 - AluSc SINE Alu -5 304 132 1054 106 56 0 chr15 19274895 19275037 -82105484 + AluSg/x SINE Alu 143 292 -18 2207 109 7 16 chr15 19275493 19275797 -82104724 + AluSx SINE Alu 1 301 -11 566 75 0 0 chr15 19276136 19276216 -82104305 + L1MA1 LINE L1 6223 6302 0 21 0 0 0 chr15 19276220 19276241 -82104280 + AT_rich Low_complexity Low_complexity 1 21 0 2387 92 3 0 chr15 19277129 19277434 -82103087 + AluSx SINE Alu 6 311 -1 1940 189 26 3 chr15 19277447 19277829 -82102692 - L1PBa LINE L1 -6472 391 1 435 310 59 34 chr15 19277846 19278085 -82102436 + L1M4c LINE L1 1111 1355 -5029 2657 43 0 0 chr15 19279188 19279490 -82101031 + AluY SINE Alu 1 302 -9 2353 109 0 3 chr15 19279545 19279847 -82100674 + AluSx SINE Alu 1 301 -11 2438 81 3 3 chr15 19279894 19280203 -82100318 + AluY SINE Alu 1 309 -2 1529 99 5 19 chr15 19280213 19280426 -82100095 + AluSc SINE Alu 1 210 -99 322 351 55 73 chr15 19280481 19281013 -82099508 + HAL1b LINE L1 59 580 -768 580 243 76 19 chr15 19281275 19281485 -82099036 - Charlie5 DNA MER1_type -32 2580 2359 739 267 67 16 chr15 19284392 19284707 -82095814 - L1MC4 LINE L1 -535 7507 7177 1489 130 0 0 chr15 19284722 19284929 -82095592 - AluSg/x SINE Alu -2 308 102 229 105 26 0 chr15 19285047 19285085 -82095436 - MLT1B LTR MaLR -318 72 34 1977 139 14 0 chr15 19285086 19285366 -82095155 - AluSx SINE Alu -26 286 3 2302 141 31 6 chr15 19285417 19285772 -82094749 - THE1B LTR MaLR 0 364 1 850 223 44 50 chr15 19285789 19285996 -82094525 - L1MC4a LINE L1 -1193 6615 6409 1800 173 0 33 chr15 19285996 19286118 -82094403 + AluJb SINE Alu 1 125 -187 2264 102 3 0 chr15 19286118 19286412 -82094109 - AluY SINE Alu -16 295 1 1800 173 0 33 chr15 19286412 19286595 -82093926 + AluJb SINE Alu 125 296 -16 850 223 44 50 chr15 19286595 19286705 -82093816 - L1MC4a LINE L1 -1399 6409 6300 1151 148 12 0 chr15 19286708 19286877 -82093644 + AluSg/x SINE Alu 133 303 -9 630 339 97 8 chr15 19286898 19287270 -82093251 + L1MEc LINE L1 55 459 -5937 2123 125 20 0 chr15 19287350 19287655 -82092866 + AluSx SINE Alu 1 311 -1 2208 114 0 19 chr15 19287901 19288209 -82092312 - AluSq SINE Alu -11 302 1 975 313 111 25 chr15 19288209 19288822 -82091699 + L1MEc LINE L1 691 1394 -4981 371 228 66 78 chr15 19289279 19289486 -82091035 - MER21B LTR ERV1 -252 353 149 304 229 57 14 chr15 19289613 19289683 -82090838 + HAL1 LINE L1 2272 2344 -163 1674 150 23 19 chr15 19289683 19289820 -82090701 + AluJo SINE Alu 1 141 -171 2486 77 0 0 chr15 19289820 19290117 -82090404 + AluY SINE Alu 1 297 -14 1674 150 23 19 chr15 19290117 19290245 -82090276 + AluJo SINE Alu 141 267 -45 300 190 17 147 chr15 19290262 19290378 -82090143 - L1MCa LINE L1 -4362 2064 1964 2434 93 3 3 chr15 19290544 19290855 -82089666 + AluSp SINE Alu 1 311 -2 2428 92 0 0 chr15 19293686 19293991 -82086530 - AluSx SINE Alu -7 305 1 2093 110 7 33 chr15 19294802 19295102 -82085419 - AluSx SINE Alu -8 304 13 1998 133 23 13 chr15 19296065 19296374 -82084147 - AluSx SINE Alu 0 312 1 1953 135 7 10 chr15 19296386 19296683 -82083838 - AluJb SINE Alu -16 296 1 215 226 119 48 chr15 19297122 19297206 -82083315 - MIR SINE MIR -112 150 61 484 298 63 0 chr15 19297889 19298047 -82082474 - MER68 LTR ERV1 0 562 395 2178 244 47 8 chr15 19298047 19298690 -82081831 + L1MEc LINE L1 2397 3064 -3151 242 200 55 0 chr15 19298727 19298782 -82081739 + L1MEc LINE L1 3040 3097 -3118 2167 118 55 22 chr15 19298850 19299213 -82081308 + THE1C LTR MaLR 1 375 0 8585 109 122 43 chr15 19299213 19299376 -82081145 + THE1C-int LTR MaLR 1 150 -1430 2296 114 0 7 chr15 19299376 19299683 -82080838 - AluSg SINE Alu -5 305 1 8585 109 122 43 chr15 19299683 19300984 -82079537 + THE1C-int LTR MaLR 150 1580 0 2044 134 21 54 chr15 19300984 19301295 -82079226 + THE1C LTR MaLR 1 298 -77 2544 70 0 0 chr15 19301295 19301597 -82078924 - AluY SINE Alu -9 302 1 2044 134 21 54 chr15 19301597 19301673 -82078848 + THE1C LTR MaLR 298 375 0 777 173 0 0 chr15 19302477 19302610 -82077911 - FLAM_C SINE Alu 0 133 1 304 275 200 38 chr15 19304651 19304811 -82075710 - L1 LINE L1 -2102 4044 3859 252 100 0 0 chr15 19305238 19305278 -82075243 + (CACCC)n Simple_repeat Simple_repeat 5 44 0 434 244 76 8 chr15 19305555 19305674 -82074847 + MER3 DNA MER1_type 81 207 -2 320 291 103 29 chr15 19305844 19305971 -82074550 - L1ME LINE L1 -715 5455 5310 2496 75 0 0 chr15 19305971 19306278 -82074243 - AluY SINE Alu -4 307 1 320 291 103 29 chr15 19306278 19306325 -82074196 - L1ME LINE L1 -860 5310 5268 280 350 25 2 chr15 19306480 19306701 -82073820 - L1ME LINE L1 -1036 5110 4882 1245 211 64 49 chr15 19307695 19308084 -82072437 - MSTD LTR MaLR 0 396 2 2155 94 42 3 chr15 19308286 19308572 -82071949 - AluSp SINE Alu -16 297 1 444 293 135 36 chr15 19308766 19308988 -82071533 + HAL1 LINE L1 1317 1560 -947 456 296 57 40 chr15 19308988 19309289 -82071232 + MER46C DNA MER2_type 3 308 -30 24 0 0 0 chr15 19309477 19309501 -82071020 + AT_rich Low_complexity Low_complexity 1 24 0 225 221 58 96 chr15 19309974 19310078 -82070443 - MIR SINE MIR -87 175 76 283 333 41 65 chr15 19311083 19311206 -82069315 + MIR3 SINE MIR 67 186 -22 216 135 0 0 chr15 19311237 19311274 -82069247 + (CATATA)n Simple_repeat Simple_repeat 6 42 0 233 29 29 0 chr15 19311274 19311308 -82069213 + (TG)n Simple_repeat Simple_repeat 2 36 0 2231 134 27 3 chr15 19311506 19311841 -82068680 + MER61A LTR ERV1 1 343 0 1113 204 7 57 chr15 19311841 19312140 -82068381 + MER61A-int LTR ERV1 1 284 -4933 1373 100 0 17 chr15 19312247 19312427 -82068094 - AluSq SINE Alu -136 177 1 26 30 0 0 chr15 19312555 19312588 -82067933 + AT_rich Low_complexity Low_complexity 1 33 0 3511 163 73 9 chr15 19313845 19314506 -82066015 + L1PBa LINE L1 144 846 -6017 395 182 39 0 chr15 19314609 19314686 -82065835 + LTR22B LTR ERVK 413 492 0 2361 111 8 17 chr15 19314688 19315039 -82065482 + HERVK22 LTR ERVK 3 350 -6487 3777 32 0 0 chr15 19315067 19315509 -82065012 - L1PA2 LINE L1 0 6155 5714 4236 96 2 3 chr15 19315509 19316090 -82064431 - HERVK22 LTR ERVK -1327 5510 4929 1504 223 74 43 chr15 19316190 19316647 -82063874 + L1ME4a LINE L1 4801 5276 -890 2235 92 0 39 chr15 19316647 19316953 -82063568 + AluSx SINE Alu 1 294 -18 1504 223 74 43 chr15 19316953 19317303 -82063218 + L1ME4a LINE L1 5276 5614 -552 462 108 0 0 chr15 19317405 19317470 -82063051 - Alu SINE Alu -245 65 1 3276 39 34 17 chr15 19318310 19318775 -82061746 - L1P LINE L1 -2026 4120 3648 1328 30 0 6 chr15 19318771 19318939 -82061582 + L1PA4 LINE L1 5850 6016 -139 * 575 330 29 0 chr15 19319327 19319536 -82060985 + MER58A DNA MER1_type 6 220 -4 2198 161 39 3 chr15 19319635 19320021 -82060500 + MER57A LTR ERV1 1 400 -3 244 274 13 51 chr15 19320305 19320462 -82060059 - L1M4 LINE L1 -2296 3850 3700 9240 67 99 5 chr15 19320719 19322057 -82058464 - L1P LINE L1 -4683 1463 1 898 136 7 0 chr15 19322058 19322198 -82058323 + HERVK22 LTR ERVK 339 479 -6358 401 79 0 0 chr15 19323382 19323445 -82057076 - SVA Other Other -820 566 504 1229 137 6 0 chr15 19323946 19324121 -82056400 + AluSq SINE Alu 1 176 -137 1038 189 62 8 chr15 19324221 19324464 -82056057 - L1P LINE L1 -1762 4384 4129 1938 127 16 13 chr15 19324464 19324779 -82055742 - MER49 LTR ERV1 -599 324 9 2190 61 3 54 chr15 19325196 19325511 -82055010 - AluY SINE Alu 0 300 1 1205 143 25 94 chr15 19325760 19326046 -82054475 - L1M2 LINE L1 -520 5780 5515 378 301 108 75 chr15 19326278 19326704 -82053817 + L1ME4a LINE L1 5650 6089 -32 2424 67 0 7 chr15 19328408 19328706 -82051815 - AluY SINE Alu -15 296 1 230 242 105 42 chr15 19328707 19328802 -82051719 - MIR SINE MIR -87 121 21 2298 82 0 26 chr15 19328912 19329075 -82051446 - AluY SINE Alu -16 295 142 2206 98 0 20 chr15 19329075 19329381 -82051140 - AluSg SINE Alu -10 300 1 2298 82 0 26 chr15 19329381 19329520 -82051001 - AluY SINE Alu -169 142 1 395 277 77 51 chr15 19330207 19330630 -82049891 - MER41E LTR ERV1 -59 453 148 193 360 120 0 chr15 19330920 19331045 -82049476 - L2 LINE L2 0 3272 3133 734 268 122 20 chr15 19331188 19331483 -82049038 + L2 LINE L2 2989 3313 0 924 268 92 68 chr15 19331762 19332588 -82047933 + HAL1 LINE L1 446 1291 -1216 3001 123 69 2 chr15 19332658 19333163 -82047358 - L1MC1 LINE L1 -1 6332 5794 216 0 0 0 chr15 19333263 19333287 -82047234 + (A)n Simple_repeat Simple_repeat 1 24 0 1703 113 117 25 chr15 19333704 19333838 -82046683 - AluSq SINE Alu -14 299 179 2568 62 0 10 chr15 19333838 19334146 -82046375 - AluY SINE Alu -4 307 3 1703 113 117 25 chr15 19334146 19334285 -82046236 - AluSq SINE Alu -134 179 1 383 247 47 40 chr15 19334329 19334479 -82046042 + L1MC5 LINE L1 7539 7689 -272 1605 173 43 56 chr15 19334635 19334823 -82045698 - L1PA16 LINE L1 -27 6139 5957 1864 120 25 11 chr15 19334823 19334998 -82045523 - AluJb SINE Alu -2 310 128 2519 57 0 10 chr15 19334998 19335297 -82045224 - AluY SINE Alu -15 296 1 1864 120 25 11 chr15 19335297 19335404 -82045117 - AluJb SINE Alu -184 128 24 1605 173 43 56 chr15 19335404 19335590 -82044931 - L1PA16 LINE L1 -209 5957 5770 469 98 0 0 chr15 19335692 19335753 -82044768 - Alu SINE Alu -256 62 2 2227 78 0 0 chr15 19335797 19336066 -82044455 + AluY SINE Alu 30 298 -13 2143 97 55 0 chr15 19336660 19336950 -82043571 + AluSg SINE Alu 1 306 -4 388 77 0 0 chr15 19337079 19337136 -82043385 - L1PB4 LINE L1 -210 5951 5895 270 128 0 0 chr15 19337137 19337176 -82043345 + L1PB4 LINE L1 5954 5992 -164 482 101 0 0 chr15 19337177 19337246 -82043275 - MER50 LTR ERV1 -167 567 499 584 95 19 38 chr15 19337343 19337448 -82043073 + L1PB4 LINE L1 6053 6155 -1 217 265 20 0 chr15 19337656 19337705 -82042816 + L2 LINE L2 3196 3245 -27 2239 93 28 0 chr15 19337712 19338003 -82042518 + AluSp SINE Alu 1 299 -14 458 162 81 0 chr15 19338003 19338102 -82042419 + FLAM_C SINE Alu 34 140 -3 1268 130 27 45 chr15 19338246 19338336 -82042185 + MER50 LTR ERV1 504 594 -140 2128 122 3 0 chr15 19338336 19338623 -82041898 + AluSx SINE Alu 5 292 -20 1268 130 27 45 chr15 19338623 19338755 -82041766 + MER50 LTR ERV1 594 722 -12 1870 156 25 15 chr15 19338755 19339081 -82041440 + MER50-int LTR ERV1 7 335 -6870 2109 97 17 3 chr15 19339136 19339424 -82041097 + AluSq SINE Alu 1 292 -21 2368 77 0 10 chr15 19339628 19339927 -82040594 + AluY SINE Alu 1 296 -15 2068 115 14 10 chr15 19339969 19340264 -82040257 + AluSx SINE Alu 1 296 -16 2417 61 3 10 chr15 19340264 19340558 -82039963 + AluY SINE Alu 1 293 -18 1314 101 0 0 chr15 19340567 19340735 -82039786 + AluSg/x SINE Alu 133 300 -12 282 155 69 0 chr15 19340799 19340857 -82039664 + L1ME4a LINE L1 6059 6120 -1 789 189 0 0 chr15 19341172 19341304 -82039217 + FLAM_C SINE Alu 2 133 0 27 49 0 0 chr15 19341318 19341359 -82039162 + AT_rich Low_complexity Low_complexity 1 41 0 1671 145 53 18 chr15 19341553 19341835 -82038686 + AluJo SINE Alu 1 292 -20 1706 150 63 3 chr15 19343243 19343577 -82036944 - L1MB3 LINE L1 -4 6179 5826 2105 193 23 2 chr15 19343636 19344071 -82036450 + L1 LINE L1 4575 5018 -1128 1813 128 0 4 chr15 19344071 19344336 -82036185 + AluSx SINE Alu 39 302 -10 261 0 0 0 chr15 19344880 19344909 -82035612 + (TA)n Simple_repeat Simple_repeat 2 30 0 2236 108 0 7 chr15 19344927 19345223 -82035298 - AluSg SINE Alu -16 294 1 22 0 0 0 chr15 19345482 19345504 -82035017 + AT_rich Low_complexity Low_complexity 1 22 0 21 36 0 0 chr15 19345787 19345815 -82034706 + AT_rich Low_complexity Low_complexity 1 28 0 341 306 121 42 chr15 19346955 19347507 -82033014 + HAL1b LINE L1 293 888 -460 31 58 0 0 chr15 19347765 19347817 -82032704 + AT_rich Low_complexity Low_complexity 1 52 0 23 92 0 0 chr15 19347948 19348013 -82032508 + AT_rich Low_complexity Low_complexity 1 65 0 259 286 62 51 chr15 19348170 19348348 -82032173 - L1ME LINE L1 -5879 191 12 2349 86 0 3 chr15 19349364 19349658 -82030863 + AluY SINE Alu 1 295 -16 282 29 0 0 chr15 19349658 19349693 -82030828 + (CATA)n Simple_repeat Simple_repeat 2 36 0 308 244 126 0 chr15 19350677 19350812 -82029709 - MER103 DNA DNA -2 164 13 514 249 83 28 chr15 19351134 19351351 -82029170 - L1MC/D LINE L1 -2326 5482 5254 343 274 139 30 chr15 19351676 19351877 -82028644 - L1MC/D LINE L1 -1300 4846 4624 2548 61 0 0 chr15 19351937 19352232 -82028289 - AluY SINE Alu -16 295 1 764 206 23 29 chr15 19352247 19352422 -82028099 - FAM SINE Alu 0 175 2 656 201 61 0 chr15 19353313 19353477 -82027044 - MER3 DNA MER1_type -30 179 6 447 225 81 38 chr15 19353854 19354014 -82026507 + L1MC5 LINE L1 7745 7911 -50 229 219 0 16 chr15 19354486 19354550 -82025971 + MIR SINE MIR 170 232 -30 564 144 136 16 chr15 19354694 19354819 -82025702 - MER20 DNA MER1_type 0 219 80 1372 136 219 0 chr15 19354833 19355075 -82025446 + AluJb SINE Alu 1 295 -7 435 219 8 62 chr15 19356406 19356534 -82023987 - L1MEd LINE L1 -4916 1203 1083 2034 88 58 49 chr15 19356550 19356858 -82023663 - AluSq SINE Alu -2 311 1 770 227 194 33 chr15 19356862 19357362 -82023159 - MLT1E2 LTR MaLR 0 626 2 1681 159 48 27 chr15 19358258 19358553 -82021968 + AluJo SINE Alu 1 301 -11 677 172 35 48 chr15 19360566 19360711 -82019810 + MER106B DNA MER1_type 904 1046 -13 250 268 204 14 chr15 19363190 19363332 -82017189 - MIR SINE MIR -1 261 93 2530 58 0 0 chr15 19363374 19363666 -82016855 - AluY SINE Alu -18 293 2 1119 129 13 0 chr15 19363771 19363926 -82016595 + AluSg/x SINE Alu 135 291 -21 311 311 105 16 chr15 19363926 19364116 -82016405 + HAL1 LINE L1 127 333 -2174 248 213 200 12 chr15 19364242 19364322 -82016199 + HAL1 LINE L1 590 684 -1823 2536 57 3 0 chr15 19364345 19364642 -82015879 + AluY SINE Alu 1 298 -13 233 258 0 34 chr15 19365096 19365185 -82015336 + L1ME LINE L1 298 383 -5687 1846 162 6 16 chr15 19365415 19365730 -82014791 + AluSx SINE Alu 1 312 0 1222 136 0 0 chr15 19365730 19365907 -82014614 + AluJb SINE Alu 134 310 -2 1206 238 98 27 chr15 19366169 19366451 -82014070 + HAL1 LINE L1 1030 1290 -1217 2448 84 0 0 chr15 19366451 19366749 -82013772 + AluSq SINE Alu 1 298 -15 1206 238 98 27 chr15 19366749 19366762 -82013759 + HAL1 LINE L1 1290 1301 -1206 1735 167 21 10 chr15 19366762 19367050 -82013471 + AluSx SINE Alu 1 291 -21 1206 238 98 27 chr15 19367050 19367722 -82012799 + HAL1 LINE L1 1301 2150 -357 316 253 0 0 chr15 19367762 19367849 -82012672 + HAL1 LINE L1 2278 2364 -143 1998 122 40 3 chr15 19368479 19368775 -82011746 + AluSx SINE Alu 1 307 -5 2541 74 0 0 chr15 19369207 19369518 -82011003 + AluY SINE Alu 1 311 0 2160 123 13 0 chr15 19369595 19369903 -82010618 - AluSx SINE Alu 0 312 1 2455 76 0 3 chr15 19370385 19370687 -82009834 - AluY SINE Alu -10 301 1 22 0 0 0 chr15 19370823 19370845 -82009676 + AT_rich Low_complexity Low_complexity 1 22 0 2537 82 0 0 chr15 19370940 19371244 -82009277 - AluSx SINE Alu -8 304 1 306 305 89 39 chr15 19371268 19371343 -82009178 - L2 LINE L2 -33 3280 3210 2312 81 0 33 chr15 19371343 19371650 -82008871 - AluSx SINE Alu -15 297 1 306 305 89 39 chr15 19371650 19371777 -82008744 - L2 LINE L2 -103 3210 3068 295 197 135 16 chr15 19371927 19372059 -82008462 - L1M2 LINE L1 -587 5575 5414 302 315 16 31 chr15 19372123 19372250 -82008271 - L1M4 LINE L1 -846 5300 5176 1094 199 93 31 chr15 19372627 19372918 -82007603 - MLT1F LTR MaLR -213 329 21 883 282 35 47 chr15 19372935 19373339 -82007182 + L2 LINE L2 2910 3308 -5 2212 87 13 20 chr15 19373370 19373668 -82006853 - AluSp SINE Alu -17 296 1 2241 87 13 10 chr15 19374055 19374353 -82006168 - AluSq SINE Alu -14 299 1 1804 269 92 2 chr15 19374451 19375083 -82005438 + MER20B DNA MER1_type 34 722 -61 2235 77 50 10 chr15 19375635 19375933 -82004588 + AluY SINE Alu 1 310 -1 1923 162 0 16 chr15 19376674 19376988 -82003533 - AluJo SINE Alu -3 309 1 255 197 26 40 chr15 19377608 19377684 -82002837 - MIR SINE MIR -115 147 73 213 39 0 0 chr15 19378077 19378103 -82002418 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 2167 96 3 3 chr15 19378103 19378385 -82002136 - AluSx SINE Alu -30 282 1 774 177 67 34 chr15 19378392 19378440 -82002081 - L1M4 LINE L1 -821 5325 5280 2179 106 13 3 chr15 19378440 19378742 -82001779 - AluSq SINE Alu -7 306 2 774 177 67 34 chr15 19378742 19378902 -82001619 - L1M4 LINE L1 -866 5280 5110 409 206 0 0 chr15 19378903 19378971 -82001550 - AluS SINE Alu -233 68 1 763 177 35 91 chr15 19378972 19379077 -82001444 - L1M4 LINE L1 -1716 4430 4321 2359 70 0 10 chr15 19379077 19379379 -82001142 - AluY SINE Alu -12 299 1 2242 84 3 0 chr15 19379383 19379681 -82000840 - AluSq SINE Alu -13 300 2 2190 100 3 13 chr15 19379689 19379998 -82000523 - AluSx SINE Alu -6 306 1 763 177 35 91 chr15 19379998 19380110 -82000411 - L1M4 LINE L1 -1835 4311 4212 2167 109 3 0 chr15 19380110 19380413 -82000108 + AluSx SINE Alu 2 305 -7 2179 98 3 0 chr15 19380413 19380709 -81999812 + AluSg SINE Alu 1 297 -13 2137 91 3 10 chr15 19381602 19381899 -81998622 - AluSx SINE Alu -17 295 1 24 32 0 0 chr15 19382559 19382590 -81997931 + AT_rich Low_complexity Low_complexity 1 31 0 218 287 92 46 chr15 19383399 19383486 -81997035 - L2 LINE L2 0 3272 3182 454 250 31 31 chr15 19383649 19383809 -81996712 + MLT1H LTR MaLR 98 257 -292 276 191 90 34 chr15 19384024 19384113 -81996408 + L1MC5 LINE L1 7845 7994 -1 2242 70 3 13 chr15 19384222 19384520 -81996001 + AluY SINE Alu 1 295 -16 2047 132 7 3 chr15 19385230 19385540 -81994981 - AluSx SINE Alu -1 311 1 463 217 0 0 chr15 19385595 19385687 -81994834 + FLAM_A SINE Alu 39 130 -12 2334 93 0 0 chr15 19385986 19386299 -81994222 + AluSp SINE Alu 1 313 0 2011 117 3 3 chr15 19386322 19386620 -81993901 + AluSg SINE Alu 1 298 -12 2108 111 0 0 chr15 19386879 19387176 -81993345 + AluSc SINE Alu 1 297 -12 2167 78 7 14 chr15 19387180 19387476 -81993045 + AluY SINE Alu 1 294 -17 1445 222 90 41 chr15 19387477 19387898 -81992623 + L1ME2 LINE L1 4740 5139 -1007 2131 92 0 44 chr15 19387898 19388041 -81992480 + AluSg SINE Alu 1 149 -161 2028 127 0 3 chr15 19388041 19388340 -81992181 + AluSx SINE Alu 1 298 -14 2379 76 0 0 chr15 19388340 19388643 -81991878 + AluY SINE Alu 1 303 -8 2131 92 0 44 chr15 19388643 19388815 -81991706 + AluSg SINE Alu 147 303 -7 1445 222 90 41 chr15 19388815 19388902 -81991619 + L1ME2 LINE L1 5139 5273 -873 182 222 19 0 chr15 19388920 19388974 -81991547 + (TA)n Simple_repeat Simple_repeat 1 55 0 344 160 0 27 chr15 19389014 19389062 -81991459 + Alu SINE Alu 2 29 -274 1962 115 0 36 chr15 19389062 19389367 -81991154 + AluSx SINE Alu 1 294 -18 344 160 0 27 chr15 19389367 19389387 -81991134 + Alu SINE Alu 29 48 -255 1436 223 67 16 chr15 19389393 19389766 -81990755 + L1ME2 LINE L1 5773 6164 0 471 209 18 27 chr15 19389799 19389909 -81990612 + L1MA10 LINE L1 6222 6330 -4 2269 97 0 0 chr15 19389909 19390207 -81990314 - AluSg SINE Alu -12 298 1 403 208 24 7 chr15 19390464 19390561 -81989960 - AluJ/FLAM SINE Alu -219 83 1 1038 202 179 22 chr15 19390655 19391052 -81989469 + LTR53 LTR ERVL 1 519 0 216 132 105 0 chr15 19392108 19392146 -81988375 - L2 LINE L2 -10 3262 3221 204 67 0 0 chr15 19392296 19392326 -81988195 + (TTG)n Simple_repeat Simple_repeat 1 30 0 734 239 6 12 chr15 19392326 19392489 -81988032 - AluJo SINE Alu -33 279 118 1983 108 18 0 chr15 19392512 19392798 -81987723 - AluSg SINE Alu -19 291 1 949 97 8 0 chr15 19393080 19393214 -81987307 + AluSq/x SINE Alu 1 135 -178 1731 231 55 4 chr15 19393316 19393767 -81986754 - L1M4 LINE L1 -2001 4145 3672 1441 155 109 53 chr15 19393767 19394051 -81986470 - AluSx SINE Alu -2 300 1 515 189 47 142 chr15 19394115 19394343 -81986178 + L1MC4 LINE L1 7708 7891 -151 968 205 85 0 chr15 19394343 19394543 -81985978 + MER20 DNA MER1_type 1 217 -2 515 189 47 142 chr15 19394543 19394673 -81985848 + L1MC4 LINE L1 7891 8032 -10 798 69 8 10 chr15 19394913 19395160 -81985361 + AluY SINE Alu 1 303 -8 297 255 71 20 chr15 19395956 19396054 -81984467 + LTR52 LTR ERVL 4 106 -315 209 200 14 29 chr15 19396071 19396141 -81984380 + A-rich Low_complexity Low_complexity 4 72 0 1951 138 0 3 chr15 19396746 19397044 -81983477 - AluSx SINE Alu -15 297 1 1793 149 14 0 chr15 19397793 19398088 -81982433 - AluJb SINE Alu -13 299 1 2202 70 3 23 chr15 19399357 19399656 -81980865 - AluSp SINE Alu -20 293 1 1935 127 14 0 chr15 19399656 19399947 -81980574 - AluSx SINE Alu -17 295 1 2008 147 0 0 chr15 19400003 19400309 -81980212 - AluSx SINE Alu -6 306 1 564 266 157 4 chr15 19400397 19400444 -81980077 + L1MC4 LINE L1 7037 7075 -813 1817 163 0 3 chr15 19400444 19400738 -81979783 + AluJo SINE Alu 1 293 -19 564 266 157 4 chr15 19400738 19400933 -81979588 + L1MC4 LINE L1 7075 7389 -499 376 265 23 45 chr15 19401243 19401326 -81979195 + L1M4b LINE L1 14 97 -6762 2021 95 0 21 chr15 19401326 19401610 -81978911 + AluY SINE Alu 1 278 -33 198 0 0 0 chr15 19401610 19401632 -81978889 + (CA)n Simple_repeat Simple_repeat 1 22 0 376 265 23 45 chr15 19401632 19401679 -81978842 + L1M4b LINE L1 95 142 -6717 * 586 149 39 0 chr15 19401676 19401809 -81978712 - L1M4 LINE L1 -2837 3309 3167 1088 133 0 12 chr15 19401812 19401977 -81978544 - AluSg/x SINE Alu -14 296 134 1079 157 0 0 chr15 19403022 19403194 -81977327 - AluSp SINE Alu -6 307 136 465 206 277 37 chr15 19403305 19403450 -81977071 - L1MC3 LINE L1 -169 7739 7630 2057 98 7 0 chr15 19403450 19403746 -81976775 - AluY SINE Alu -13 298 1 465 206 277 37 chr15 19403746 19403844 -81976677 - L1MC3 LINE L1 -278 7630 7344 291 200 0 71 chr15 19404984 19405124 -81975397 + C-rich Low_complexity Low_complexity 4 133 0 267 31 0 0 chr15 19405262 19405294 -81975227 + (CCG)n Simple_repeat Simple_repeat 3 34 0 328 251 16 64 chr15 19405357 19405544 -81974977 + G-rich Low_complexity Low_complexity 3 180 0 2373 68 0 0 chr15 19405869 19406180 -81974341 + AluY SINE Alu 1 311 0 22 56 0 0 chr15 19406208 19406244 -81974277 + AT_rich Low_complexity Low_complexity 1 36 0 793 76 9 0 chr15 19406537 19406642 -81973879 - AluSq/x SINE Alu -205 107 2 1404 158 41 21 chr15 19406682 19406973 -81973548 + AluJo SINE Alu 1 297 -15 2124 64 3 71 chr15 19407034 19407360 -81973161 + AluY SINE Alu 1 304 -7 437 263 89 0 chr15 19407398 19407577 -81972944 - HAL1b LINE L1 -183 1165 971 1644 141 16 4 chr15 19407585 19407841 -81972680 + AluJb SINE Alu 1 259 -53 2239 75 7 0 chr15 19407964 19408259 -81972262 + AluSq SINE Alu 1 297 -16 609 234 208 19 chr15 19408504 19408773 -81971748 - L1MA9 LINE L1 -36 6276 5957 223 273 208 26 chr15 19408958 19409112 -81971409 - MIR SINE MIR 0 262 81 2291 71 0 7 chr15 19409171 19409480 -81971041 + AluSx SINE Alu 1 307 -5 1475 167 29 0 chr15 19409551 19409832 -81970689 + AluJb SINE Alu 1 289 -23 2273 67 0 0 chr15 19411413 19411712 -81968809 + AluY SINE Alu 1 299 -12 2183 85 7 0 chr15 19411722 19412027 -81968494 + AluSg SINE Alu 1 307 -3 1959 63 0 12 chr15 19412298 19412450 -81968071 - AluSc SINE Alu -26 283 134 2269 70 3 13 chr15 19412450 19412748 -81967773 - AluSg SINE Alu -15 295 1 1959 63 0 12 chr15 19412748 19412848 -81967673 - AluSc SINE Alu -175 134 34 428 119 415 0 chr15 19413483 19413601 -81966920 + MLT1H LTR MaLR 1 167 -382 355 227 76 42 chr15 19413709 19413828 -81966693 + MLT1H LTR MaLR 427 549 0 1315 103 0 73 chr15 19413862 19414066 -81966455 + MER1B DNA MER1_type 151 339 0 820 199 51 0 chr15 19414421 19414577 -81965944 + L1ME1 LINE L1 5526 5689 -475 2019 91 16 26 chr15 19414577 19414885 -81965636 + AluY SINE Alu 1 305 -6 966 279 20 26 chr15 19414891 19415239 -81965282 + L1ME1 LINE L1 5816 6161 -5 8589 60 7 10 chr15 19415533 19416607 -81963914 + MER11C LTR ERVK 1 1071 0 2089 220 45 6 chr15 19416861 19417347 -81963174 + MLT1D LTR MaLR 1 505 0 2201 82 3 3 chr15 19417624 19417917 -81962604 - AluSp SINE Alu -20 293 1 1052 116 107 28 chr15 19418418 19418633 -81961888 + AluJo SINE Alu 81 312 0 2274 97 0 3 chr15 19418900 19419208 -81961313 - AluSg SINE Alu -3 307 1 216 0 0 0 chr15 19419210 19419234 -81961287 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2121 99 3 0 chr15 19419234 19419517 -81961004 - AluSp SINE Alu -29 284 1 1912 142 3 7 chr15 19419565 19419868 -81960653 - AluSx SINE Alu -10 302 1 279 324 27 26 chr15 19420885 19421048 -81959473 - MIR SINE MIR -26 182 23 1868 177 42 0 chr15 19424402 19424736 -81955785 + MER7A DNA MER2_type 1 346 0 1390 74 69 0 chr15 19426271 19426460 -81954061 + AluSg SINE Alu 1 202 -108 907 114 15 0 chr15 19426866 19426998 -81953523 - AluSg/x SINE Alu -20 290 157 607 217 56 35 chr15 19427092 19427235 -81953286 - LTR8 LTR ERV1 -545 146 1 1454 123 0 0 chr15 19427254 19427465 -81953056 - AluSx SINE Alu -8 302 92 731 153 9 0 chr15 19427556 19427667 -81952854 - AluSx SINE Alu -199 113 2 1618 180 30 0 chr15 19427693 19427988 -81952533 + AluJb SINE Alu 1 304 -8 4307 215 23 25 chr15 19427988 19429013 -81951508 + L1MA9 LINE L1 5260 6282 -30 1852 231 46 104 chr15 19429104 19429837 -81950684 - LTR34 LTR ERV1 -8 691 1 689 316 69 9 chr15 19429871 19430304 -81950217 + L1M4 LINE L1 2380 2838 -3308 274 209 55 22 chr15 19430320 19430411 -81950110 + L1M4 LINE L1 3184 3277 -2869 745 269 95 37 chr15 19430515 19430731 -81949790 + L1M4 LINE L1 3449 3651 -2495 2209 99 0 20 chr15 19430731 19431068 -81949453 + AluY SINE Alu 3 311 0 745 269 95 37 chr15 19431068 19431335 -81949186 + L1M4 LINE L1 3651 3960 -2186 2176 95 3 23 chr15 19431424 19431728 -81948793 + AluSg SINE Alu 1 298 -12 252 188 43 29 chr15 19431925 19431994 -81948527 + MLT1J LTR MaLR 391 460 -51 539 134 12 0 chr15 19432089 19432171 -81948350 - AluS SINE Alu -226 87 5 279 314 64 29 chr15 19434317 19434457 -81946064 + MIR SINE MIR 48 192 -70 235 274 60 17 chr15 19434598 19434715 -81945806 + L2 LINE L2 3187 3308 -5 250 154 39 0 chr15 19436048 19436100 -81944421 + L1MC4a LINE L1 5885 5938 -1870 222 91 0 0 chr15 19436104 19436137 -81944384 + (TG)n Simple_repeat Simple_repeat 2 34 0 473 254 179 20 chr15 19436331 19436532 -81943989 + MIR SINE MIR 20 252 -10 1348 101 0 0 chr15 19436665 19436843 -81943678 + AluSp SINE Alu 136 313 0 191 323 0 0 chr15 19437182 19437247 -81943274 + MIR SINE MIR 53 117 -91 255 324 0 0 chr15 19437858 19437994 -81942527 + (CAG)n Simple_repeat Simple_repeat 3 138 0 530 280 0 1 chr15 19437999 19439770 -81940751 + GA-rich Low_complexity Low_complexity 1 1768 0 270 261 0 0 chr15 19439804 19439980 -81940541 + GA-rich Low_complexity Low_complexity 3 178 0 367 222 0 17 chr15 19440014 19440190 -81940331 + GA-rich Low_complexity Low_complexity 3 175 0 223 212 0 26 chr15 19440245 19440358 -81940163 + GA-rich Low_complexity Low_complexity 3 112 0 394 305 0 0 chr15 19440392 19440520 -81940001 + GA-rich Low_complexity Low_complexity 3 130 0 806 156 17 67 chr15 19440867 19441046 -81939475 + AluSg/x SINE Alu 126 295 -15 2202 112 3 0 chr15 19441690 19441986 -81938535 - AluSx SINE Alu -15 297 1 638 220 52 6 chr15 19442006 19442179 -81938342 - L1ME2 LINE L1 -2 6162 5982 881 172 0 0 chr15 19443062 19443196 -81937325 + FRAM SINE Alu 18 151 -25 2323 78 0 3 chr15 19443238 19443532 -81936989 + AluY SINE Alu 1 293 -18 2531 165 92 0 chr15 19443538 19444059 -81936462 + L1MB3 LINE L1 5607 6175 -8 26 30 0 0 chr15 19444059 19444092 -81936429 + AT_rich Low_complexity Low_complexity 1 33 0 630 179 49 0 chr15 19444421 19444544 -81935977 + LTR53 LTR ERVL 351 479 -40 2190 254 99 14 chr15 19444617 19445395 -81935126 + L1ME1 LINE L1 5320 6163 -3 2381 96 0 0 chr15 19445409 19445711 -81934810 + AluSg SINE Alu 5 306 -4 2138 130 0 0 chr15 19446077 19446376 -81934145 + AluSx SINE Alu 1 299 -13 961 240 35 47 chr15 19446623 19446699 -81933822 + MER58B DNA MER1_type 3 78 -2342 1663 103 117 43 chr15 19446699 19446981 -81933540 - AluSx SINE Alu -9 303 1 961 240 35 47 chr15 19446981 19447246 -81933275 + MER58B DNA MER1_type 78 340 -1 888 152 0 0 chr15 19447651 19447783 -81932738 + AluJo/FLAM SINE Alu 1 132 -180 1913 125 68 0 chr15 19447786 19447912 -81932609 + AluSx SINE Alu 1 117 -195 1561 109 14 0 chr15 19447912 19448123 -81932398 + AluSg SINE Alu 12 225 -85 1913 125 68 0 chr15 19448123 19448277 -81932244 + AluSx SINE Alu 117 300 -12 2182 120 3 0 chr15 19448437 19448738 -81931783 + AluSg SINE Alu 3 304 -6 210 324 0 45 chr15 19449812 19449923 -81930598 + GA-rich Low_complexity Low_complexity 4 109 0 2403 74 0 0 chr15 19450036 19450333 -81930188 - AluY SINE Alu -14 297 1 2028 122 31 0 chr15 19451014 19451302 -81929219 - AluSx SINE Alu -15 297 1 531 284 122 53 chr15 19451446 19452162 -81928359 - L1M4 LINE L1 -1719 4427 3663 1933 95 103 0 chr15 19452205 19452467 -81928054 + AluSx SINE Alu 1 289 -23 456 278 97 72 chr15 19452785 19453216 -81927305 - HAL1b LINE L1 -837 511 70 2039 126 11 52 chr15 19453403 19453751 -81926770 - MER1B DNA MER1_type -1 336 3 7271 33 7 3 chr15 19454672 19455541 -81924980 + L1PA4 LINE L1 5284 6155 0 2633 46 0 0 chr15 19457135 19457437 -81923084 + AluY SINE Alu 2 303 -8 640 282 55 35 chr15 19458071 19458326 -81922195 - MIR SINE MIR 0 262 3 260 296 9 28 chr15 19458404 19458512 -81922009 + (CAGAGA)n Simple_repeat Simple_repeat 2 107 0 1616 169 59 10 chr15 19458596 19458886 -81921635 + AluJb SINE Alu 1 304 -8 215 250 15 0 chr15 19459401 19459469 -81921052 + GA-rich Low_complexity Low_complexity 4 72 0 372 181 188 169 chr15 19459663 19460072 -81920449 + L1MC4a LINE L1 5849 6265 -1543 390 288 106 25 chr15 19460141 19460301 -81920220 + MIR SINE MIR 73 245 -17 376 291 85 16 chr15 19461020 19461240 -81919281 - L2 LINE L2 -276 3037 2804 1096 198 81 102 chr15 19461274 19461608 -81918913 - MER58B DNA MER1_type -10 331 5 2340 75 0 4 chr15 19461685 19461989 -81918532 + AluSc SINE Alu 1 303 0 190 276 52 0 chr15 19462157 19462215 -81918306 + L2 LINE L2 3252 3312 -1 326 279 36 36 chr15 19462456 19462567 -81917954 - MER91A DNA MER1_type -20 176 66 214 341 37 24 chr15 19463942 19464024 -81916497 + L2 LINE L2 3168 3250 -22 1893 166 0 0 chr15 19465587 19465897 -81914624 + AluJb SINE Alu 1 310 0 333 242 54 33 chr15 19466806 19466983 -81913538 - MER58C DNA MER1_type -9 206 9 415 248 35 0 chr15 19467390 19467503 -81913018 + L1MEd LINE L1 598 714 -5405 * 1101 194 107 4 chr15 19467501 19467743 -81912778 + L1MD3 LINE L1 7729 7995 0 428 224 36 12 chr15 19467750 19467915 -81912606 + L1MEd LINE L1 699 867 -5252 24 0 0 0 chr15 19468525 19468549 -81911972 + AT_rich Low_complexity Low_complexity 1 24 0 2253 102 3 0 chr15 19468728 19469022 -81911499 + AluSx SINE Alu 6 300 -12 2810 194 79 70 chr15 19469559 19469590 -81910931 + L1ME1 LINE L1 5194 5223 -943 2635 115 32 32 chr15 19469590 19470024 -81910497 + Tigger2a DNA MER2_type 1 434 0 2810 194 79 70 chr15 19470024 19470905 -81909616 + L1ME1 LINE L1 5223 6101 -65 228 351 0 18 chr15 19470812 19470913 -81909608 + L1MA10 LINE L1 6169 6269 -65 * 1689 139 9 89 chr15 19470913 19471250 -81909271 + AluJo SINE Alu 1 310 -2 2182 107 3 0 chr15 19472170 19472468 -81908053 + AluSx SINE Alu 1 299 -13 837 209 39 2 chr15 19472470 19472676 -81907845 + MIR SINE MIR 31 241 -21 2414 64 0 0 chr15 19473347 19473656 -81906865 - AluY SINE Alu 0 309 1 189 121 0 0 chr15 19473913 19473946 -81906575 + (CA)n Simple_repeat Simple_repeat 2 34 0 2039 141 0 7 chr15 19475963 19476262 -81904259 + AluSx SINE Alu 1 297 -15 29 0 0 0 chr15 19476284 19476313 -81904208 + AT_rich Low_complexity Low_complexity 1 29 0 2143 98 0 54 chr15 19476698 19477014 -81903507 - AluSg SINE Alu -11 299 1 207 0 0 0 chr15 19478074 19478097 -81902424 + (CA)n Simple_repeat Simple_repeat 2 24 0 2028 125 0 34 chr15 19478920 19479217 -81901304 + AluSx SINE Alu 1 287 -25 1184 179 0 5 chr15 19679290 19679485 -81701036 + MLT1A1 LTR MaLR 172 365 0 2973 277 58 64 chr15 19679647 19679798 -81700723 + L2 LINE L2 1531 1681 -1632 3486 47 21 36 chr15 19679798 19680138 -81700383 - L1PA8 LINE L1 -2 6170 5837 2348 110 0 0 chr15 19680138 19680439 -81700082 - AluSg SINE Alu -7 303 3 3486 47 21 36 chr15 19680439 19680570 -81699951 - L1PA8 LINE L1 -335 5837 5706 2973 277 58 64 chr15 19680570 19680723 -81699798 + L2 LINE L2 1681 1833 -1480 2367 79 0 23 chr15 19680723 19681026 -81699495 - AluY SINE Alu -13 298 3 2973 277 58 64 chr15 19681026 19681880 -81698641 + L2 LINE L2 1833 2676 -637 2529 70 0 6 chr15 19681880 19682193 -81698328 + AluY SINE Alu 1 311 0 2973 277 58 64 chr15 19682193 19682828 -81697693 + L2 LINE L2 2676 3313 0 2191 109 3 0 chr15 19683050 19683353 -81697168 - AluY SINE Alu -7 304 1 2274 141 0 57 chr15 19683442 19683715 -81696806 + L1PA13 LINE L1 5767 6010 -153 2350 78 0 0 chr15 19683715 19684035 -81696486 + AluY SINE Alu 1 320 0 2274 141 0 57 chr15 19684035 19684180 -81696341 + L1PA13 LINE L1 6010 6162 -1 358 241 8 0 chr15 19684265 19684521 -81696000 + (CA)n Simple_repeat Simple_repeat 1 258 0 471 291 0 22 chr15 19684572 19684754 -81695767 + (CA)n Simple_repeat Simple_repeat 1 178 0 408 264 9 5 chr15 19684765 19684984 -81695537 + (CA)n Simple_repeat Simple_repeat 1 220 0 514 294 0 17 chr15 19685091 19685271 -81695250 + (CA)n Simple_repeat Simple_repeat 2 178 0 195 114 0 0 chr15 19685332 19685367 -81695154 + (CA)n Simple_repeat Simple_repeat 2 36 0 278 342 80 35 chr15 19685945 19686343 -81694178 + L2 LINE L2 2288 2703 -611 194 350 117 15 chr15 19687688 19687825 -81692696 + L2 LINE L2 2916 3066 -206 493 269 15 8 chr15 19688436 19688570 -81691951 - L2 LINE L2 0 3313 3179 5687 129 25 18 chr15 19688658 19689605 -81690916 - L1PA15 LINE L1 0 6165 5213 * 10225 228 32 7 chr15 19689593 19692128 -81688393 - L1PA15 LINE L1 -1270 4876 2280 811 285 90 42 chr15 19693250 19693629 -81686892 + MLT1J2 LTR MaLR 39 435 -15 552 335 41 61 chr15 19693648 19694161 -81686360 - L2 LINE L2 -261 3052 2549 2951 191 20 42 chr15 19694238 19694831 -81685690 + LTR22 LTR ERVK 1 580 0 2291 231 23 0 chr15 19695538 19696101 -81684420 - L1M4 LINE L1 -813 5333 4758 1602 224 107 95 chr15 19696093 19696651 -81683870 - L1M4 LINE L1 -2069 4077 3507 * 2461 44 0 17 chr15 19696651 19696944 -81683577 + AluY SINE Alu 1 288 -23 1602 224 107 95 chr15 19696944 19697083 -81683438 - L1M4 LINE L1 -2639 3507 3371 398 253 11 0 chr15 19697227 19697318 -81683203 - L1MCb LINE L1 -5880 165 74 2061 113 3 33 chr15 19697963 19698264 -81682257 - AluSx SINE Alu -20 292 1 2155 120 0 23 chr15 19698533 19698841 -81681680 - AluSx SINE Alu -11 301 1 2483 47 7 3 chr15 19699235 19699533 -81680988 - AluY SINE Alu -12 299 1 2091 281 103 20 chr15 19699655 19700472 -81680049 + L1MD2 LINE L1 272 1156 -5384 2513 214 27 102 chr15 19700510 19701235 -81679286 + L1MD2 LINE L1 3906 4555 -1985 2322 88 0 10 chr15 19701235 19701532 -81678989 + AluY SINE Alu 1 294 -17 2513 214 27 102 chr15 19701532 19701685 -81678836 + L1MD2 LINE L1 4555 4718 -1822 206 61 0 30 chr15 19701725 19701740 -81678781 + (TATAA)n Simple_repeat Simple_repeat 1 15 -17 2248 103 0 7 chr15 19701740 19702031 -81678490 + AluSq SINE Alu 1 289 -24 206 61 0 30 chr15 19702031 19702048 -81678473 + (TATAA)n Simple_repeat Simple_repeat 15 32 0 1242 246 34 34 chr15 19702062 19702480 -81678041 + L1MD2 LINE L1 4766 5183 -1357 2488 242 107 62 chr15 19702538 19702703 -81677818 + L1MD2 LINE L1 5196 5352 -1401 194 0 0 37 chr15 19702703 19702730 -81677791 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 2488 242 107 62 chr15 19702730 19703126 -81677395 + L1MD2 LINE L1 5352 5729 -1024 2112 121 7 3 chr15 19703126 19703423 -81677098 + AluSx SINE Alu 3 300 -12 2488 242 107 62 chr15 19703423 19703633 -81676888 + L1MD2 LINE L1 5729 5928 -825 2722 45 0 0 chr15 19703633 19703944 -81676577 + AluY SINE Alu 1 311 0 2488 242 107 62 chr15 19703944 19704665 -81675856 + L1MD2 LINE L1 5928 6741 -12 463 279 73 62 chr15 19706398 19706739 -81673782 - L1ME LINE L1 -420 5701 5357 2270 95 3 19 chr15 19706889 19707205 -81673316 - AluY SINE Alu 0 311 1 420 300 56 4 chr15 19709261 19709494 -81671027 + L1 LINE L1 3535 3779 -2367 208 302 0 44 chr15 19711883 19712065 -81668456 + (CGGGG)n Simple_repeat Simple_repeat 3 176 0 246 269 13 13 chr15 19713705 19713783 -81666738 - L2 LINE L2 -564 2750 2673 429 183 43 43 chr15 19715017 19715110 -81665411 - Tigger7 DNA MER2_type 0 2487 2395 1817 162 20 0 chr15 19715115 19715409 -81665112 - Tigger7 DNA MER2_type -219 514 215 1440 192 48 0 chr15 19715409 19715659 -81664862 + Tigger7 DNA MER2_type 1 262 -2225 557 160 0 40 chr15 19715662 19715762 -81664759 + Tigger7 DNA MER2_type 2492 2587 0 197 259 0 52 chr15 19717256 19717314 -81663207 - L2 LINE L2 -2 3311 3257 1577 182 0 57 chr15 19717930 19718248 -81662273 - AluJo SINE Alu -12 300 1 1668 256 63 47 chr15 19718284 19718531 -81661990 - L1ME2 LINE L1 -2 6162 5921 195 42 0 0 chr15 19718531 19718555 -81661966 + (GGGA)n Simple_repeat Simple_repeat 2 25 0 1668 256 63 47 chr15 19718555 19719031 -81661490 - L1ME2 LINE L1 -243 5921 5427 340 213 56 46 chr15 19719016 19719124 -81661397 - L1ME LINE L1 -598 5566 5458 * 1846 168 80 105 chr15 19719195 19719730 -81660791 - L1MC2 LINE L1 -9 6335 5814 3337 185 6 12 chr15 19719735 19720388 -81660133 - L1MC1 LINE L1 -3 6330 5682 2262 91 3 10 chr15 19720390 19720688 -81659833 - AluY SINE Alu -14 297 2 1622 273 75 24 chr15 19720690 19720861 -81659660 - L1MCc LINE L1 -3014 3927 3766 2323 79 4 0 chr15 19720861 19721182 -81659339 - AluSc SINE Alu 0 322 1 1622 273 75 24 chr15 19721182 19721834 -81658687 - L1MCc LINE L1 -3175 3766 3061 669 206 46 88 chr15 19721855 19722115 -81658406 - MLT2B1 LTR ERVL -41 491 282 363 188 62 21 chr15 19722145 19722241 -81658280 - MLT2D LTR ERVL -314 100 1 635 264 108 16 chr15 19722294 19722673 -81657848 - L1MCc LINE L1 -4134 2988 2575 341 86 17 0 chr15 19722703 19722761 -81657760 + (TCTA)n Simple_repeat Simple_repeat 4 62 0 25 0 0 0 chr15 19722946 19722971 -81657550 + AT_rich Low_complexity Low_complexity 1 25 0 513 249 35 46 chr15 19723053 19723250 -81657271 - L2 LINE L2 -6 3307 3113 225 108 0 0 chr15 19723941 19723978 -81656543 + (CA)n Simple_repeat Simple_repeat 2 38 0 672 278 28 0 chr15 19723986 19724198 -81656323 - L1MCc LINE L1 -4604 2518 2301 5006 169 10 54 chr15 19724200 19724704 -81655817 + L1MA8 LINE L1 4784 5309 -982 2358 105 0 3 chr15 19724704 19725010 -81655511 + AluSx SINE Alu 6 310 -2 5006 169 10 54 chr15 19725010 19726067 -81654454 + L1MA8 LINE L1 5309 6287 -4 713 315 47 25 chr15 19726136 19726953 -81653568 - L1MCc LINE L1 -4888 1535 1180 186 43 0 0 chr15 19727208 19727231 -81653290 + (TTG)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr15 19728816 19728838 -81651683 + AT_rich Low_complexity Low_complexity 1 22 0 537 311 128 19 chr15 19729508 19729923 -81650598 + L2 LINE L2 2839 3298 -15 396 305 24 12 chr15 19730065 19730229 -81650292 + MIR SINE MIR 24 189 -73 23 0 0 0 chr15 19730449 19730472 -81650049 + AT_rich Low_complexity Low_complexity 1 23 0 2163 90 11 0 chr15 19730480 19730757 -81649764 + AluSg SINE Alu 1 280 -30 2547 59 3 0 chr15 19730757 19731062 -81649459 + AluY SINE Alu 1 306 -5 2600 222 64 67 chr15 19731099 19731943 -81648578 - L1MD2 LINE L1 -4 6355 5510 2540 52 3 3 chr15 19731943 19732253 -81648268 - AluY SINE Alu -1 310 1 2600 222 64 67 chr15 19732253 19732573 -81647948 - L1MD2 LINE L1 -849 5510 5191 2432 73 0 6 chr15 19732573 19732886 -81647635 + AluY SINE Alu 1 311 0 2600 222 64 67 chr15 19732886 19733471 -81647050 - L1MD2 LINE L1 -1168 5191 4622 219 36 0 0 chr15 19733631 19733659 -81646862 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 1374 196 4 0 chr15 19733661 19733901 -81646620 - AluJb SINE Alu -30 282 42 2114 128 0 0 chr15 19734793 19735082 -81645439 + AluSx SINE Alu 1 289 -23 206 57 57 0 chr15 19736449 19736484 -81644037 + A-rich Low_complexity Low_complexity 3 39 0 1019 128 4 149 chr15 19736543 19736778 -81643743 + MLT1B LTR MaLR 190 390 0 271 290 0 0 chr15 19737374 19737436 -81643085 + MER81 DNA DNA 32 93 -21 2275 244 66 46 chr15 19737439 19738288 -81642233 - L1MD2 LINE L1 -1538 4608 3743 294 70 0 23 chr15 19739018 19739061 -81641460 + U2 snRNA snRNA 1 42 -146 376 341 60 27 chr15 19739215 19739514 -81641007 + L2 LINE L2 2301 2609 -705 254 321 43 36 chr15 19739625 19739765 -81640756 + L2 LINE L2 1959 2099 -1215 2064 131 24 3 chr15 19740013 19740303 -81640218 + AluJo SINE Alu 1 296 -16 231 178 78 67 chr15 19741044 19741134 -81639387 - MLT1L LTR MaLR -5 610 520 243 274 39 10 chr15 19741494 19741596 -81638925 + L1MC4 LINE L1 6600 6704 -1338 * 252 255 38 9 chr15 19741509 19741615 -81638906 - L1MC4 LINE L1 -1339 6703 6595 460 236 27 0 chr15 19741615 19741835 -81638686 + (TA)n Simple_repeat Simple_repeat 1 225 0 232 245 0 82 chr15 19741870 19741968 -81638553 - L1MC4 LINE L1 -1339 6703 6614 183 235 12 24 chr15 19741969 19742054 -81638467 + (TA)n Simple_repeat Simple_repeat 1 84 0 226 277 9 71 chr15 19742055 19742167 -81638354 + L1MC4 LINE L1 6614 6718 -1324 811 186 0 0 chr15 19742328 19742452 -81638069 - FLAM_C SINE Alu -18 125 2 2427 80 0 0 chr15 19742549 19742848 -81637673 + AluY SINE Alu 1 299 -12 279 318 45 18 chr15 19742859 19742969 -81637552 + L2 LINE L2 3160 3272 0 420 324 82 72 chr15 19743491 19743797 -81636724 + L2 LINE L2 2964 3272 0 2423 64 3 3 chr15 19744040 19744336 -81636185 - L1PA6 LINE L1 -1 6153 5858 2487 54 3 0 chr15 19744336 19744631 -81635890 + AluY SINE Alu 1 296 -15 3085 38 6 0 chr15 19744631 19744996 -81635525 - L1PA5 LINE L1 -1898 4248 3882 9924 36 0 0 chr15 19744996 19746894 -81633627 + L1PA5 LINE L1 4249 6149 -5 240 35 0 0 chr15 19746894 19746923 -81633598 + (TA)n Simple_repeat Simple_repeat 1 29 0 231 71 0 0 chr15 19746924 19746952 -81633569 - L1PA6 LINE L1 -258 5873 5846 * 756 16 0 157 chr15 19746949 19747015 -81633506 + L1P2 LINE L1 5391 5431 -723 2538 51 3 6 chr15 19747015 19747327 -81633194 + AluY SINE Alu 1 311 0 756 16 0 157 chr15 19747327 19747381 -81633140 + L1P2 LINE L1 5431 5492 -662 2115 125 0 0 chr15 19747554 19747851 -81632670 - AluSx SINE Alu -15 297 1 180 0 0 0 chr15 19747866 19747886 -81632635 + (TTA)n Simple_repeat Simple_repeat 2 21 0 2329 53 3 7 chr15 19747888 19748172 -81632349 - AluY SINE Alu -24 287 5 189 419 31 16 chr15 19748256 19748385 -81632136 - L2 LINE L2 -1 3271 3141 26 0 0 0 chr15 19748650 19748676 -81631845 + AT_rich Low_complexity Low_complexity 1 26 0 253 354 97 0 chr15 19750221 19750365 -81630156 + MIR SINE MIR 31 188 -74 26 30 0 0 chr15 19750429 19750462 -81630059 + AT_rich Low_complexity Low_complexity 1 33 0 424 318 53 11 chr15 19750512 19750701 -81629820 + MIR SINE MIR 28 224 -38 21 57 0 0 chr15 19750706 19750741 -81629780 + AT_rich Low_complexity Low_complexity 1 35 0 239 311 36 44 chr15 19751262 19751510 -81629011 + L1 LINE L1 3532 3777 -2369 22 35 0 0 chr15 19752801 19752830 -81627691 + GC_rich Low_complexity Low_complexity 1 29 0 182 320 103 49 chr15 19752866 19753069 -81627452 - L2 LINE L2 -850 2464 2251 269 186 14 0 chr15 19754131 19754201 -81626320 + CT-rich Low_complexity Low_complexity 3 73 0 2120 114 7 7 chr15 19754409 19754716 -81625805 + AluSx SINE Alu 1 307 -5 195 298 41 50 chr15 19756453 19756574 -81623947 - L2 LINE L2 -609 2705 2586 225 238 202 24 chr15 19756577 19756661 -81623860 - L2 LINE L2 -1 3271 3173 955 273 73 23 chr15 19757502 19757869 -81622652 - L1M4c LINE L1 -2358 4024 3630 2037 147 144 5 chr15 19757869 19758244 -81622277 - MSTA LTR MaLR 0 428 2 955 273 73 23 chr15 19758244 19758315 -81622206 - L1M4c LINE L1 -2752 3630 3564 466 341 61 29 chr15 19758485 19758732 -81621789 + L2 LINE L2 2068 2336 -978 1514 199 14 7 chr15 19758732 19759052 -81621469 - AluJb SINE Alu 0 322 1 466 341 61 29 chr15 19759052 19759211 -81621310 + L2 LINE L2 2336 2488 -826 897 244 67 8 chr15 19759396 19759634 -81620887 - MLT1C LTR MaLR -2 465 214 27 62 0 0 chr15 19760036 19760084 -81620437 + AT_rich Low_complexity Low_complexity 1 48 0 1289 288 118 45 chr15 19760196 19760881 -81619640 - MER21B LTR ERV1 -128 735 1 3516 120 14 10 chr15 19761004 19761512 -81619009 - MER9 LTR ERVK -1 510 1 31286 83 6 5 chr15 19761515 19765847 -81614674 - HERVK9 LTR ERVK -2 8033 1669 2285 85 0 0 chr15 19765847 19766150 -81614371 + AluY SINE Alu 1 303 0 31286 83 6 5 chr15 19766150 19766196 -81614325 - HERVK9 LTR ERVK -6366 1669 1625 4469 101 18 21 chr15 19766196 19766860 -81613661 - HERVK9 LTR ERVK -5254 662 1 3467 99 47 12 chr15 19766860 19767354 -81613167 - MER9 LTR ERVK 0 511 1 2846 253 36 17 chr15 19767568 19768601 -81611920 - L1ME1 LINE L1 -5 6161 5006 518 273 72 36 chr15 19769052 19769411 -81611110 - L1M4c LINE L1 -2815 3567 3196 1188 244 107 46 chr15 19769412 19770041 -81610480 - L1M4c LINE L1 -3229 3153 2477 2112 139 0 0 chr15 19770041 19770336 -81610185 + AluSx SINE Alu 1 295 -17 1188 244 107 46 chr15 19770336 19770395 -81610126 - L1M4c LINE L1 -3905 2477 2423 2323 234 28 14 chr15 19770406 19770975 -81609546 - L1MD3 LINE L1 -8 7987 7411 414 294 8 0 chr15 19770979 19771098 -81609423 - MLT1F1 LTR MaLR -447 120 1 1322 240 11 35 chr15 19771099 19771470 -81609051 - L1MD3 LINE L1 -718 7277 6916 249 57 0 0 chr15 19771470 19771505 -81609016 + (TG)n Simple_repeat Simple_repeat 1 35 0 275 167 0 0 chr15 19771621 19771669 -81608852 - L1M4c LINE L1 -4740 1823 1776 247 137 39 0 chr15 19771670 19771721 -81608800 - L1M4c LINE L1 -4701 1681 1629 380 286 25 26 chr15 19771746 19771757 -81608764 - L1M4c LINE L1 -4816 1566 1556 2236 114 0 19 chr15 19771757 19772074 -81608447 - AluY SINE Alu 0 311 1 2323 119 0 0 chr15 19772074 19772384 -81608137 - AluSq SINE Alu -3 310 1 380 286 25 26 chr15 19772384 19772571 -81607950 - L1M4c LINE L1 -4824 1558 1266 324 143 0 0 chr15 19772596 19772645 -81607876 - Alu SINE Alu -252 50 2 1910 247 84 13 chr15 19772645 19773276 -81607245 - L1MCc LINE L1 -4823 2118 1443 288 302 68 27 chr15 19773590 19773812 -81606709 - MER41B LTR ERV1 -230 405 175 300 303 10 0 chr15 19773912 19774011 -81606510 - PRIMA41-int LTR ERV1 -4 7752 7653 1966 149 0 10 chr15 19774945 19775246 -81605275 - AluSx SINE Alu -13 299 2 653 360 38 7 chr15 19775547 19775997 -81604524 - PRIMA41-int LTR ERV1 -1934 5822 5359 267 266 0 0 chr15 19776398 19776462 -81604059 - PRIMA41-int LTR ERV1 -1838 5253 5190 2009 138 0 3 chr15 19776756 19777052 -81603469 + AluSx SINE Alu 1 295 -17 2526 71 3 0 chr15 19777423 19777733 -81602788 - AluY SINE Alu 0 311 1 364 269 105 46 chr15 19777974 19778193 -81602328 - MER41B LTR ERV1 -220 415 184 822 190 0 0 chr15 19778228 19778370 -81602151 - L1PA15 LINE L1 0 6165 6024 1122 220 36 11 chr15 19778449 19778749 -81601772 - L1MCc LINE L1 -5711 711 58 500 216 36 91 chr15 19778803 19779028 -81601493 - L1MEc LINE L1 -4203 2281 2006 260 220 43 21 chr15 19779040 19779181 -81601340 + (TA)n Simple_repeat Simple_repeat 1 144 0 370 244 45 61 chr15 19779236 19779482 -81601039 - L1MEc LINE L1 -4361 2065 1824 31719 32 15 1 chr15 19779482 19785509 -81595012 + L1PA3 LINE L1 2 6155 0 21 0 0 0 chr15 19785509 19785530 -81594991 + AT_rich Low_complexity Low_complexity 1 21 0 540 246 44 60 chr15 19785538 19785786 -81594735 - L1MEc LINE L1 -4668 1939 1696 247 182 197 0 chr15 19786058 19786124 -81594397 + LOR1b LTR ERV1 1 79 -382 802 122 0 0 chr15 19786125 19786248 -81594273 - AluSg/x SINE Alu -1 308 186 3475 173 58 6 chr15 19786248 19786927 -81593594 - L1MA8 LINE L1 -342 5949 5194 1436 190 117 56 chr15 19786927 19787019 -81593502 + MER47B DNA MER2_type 1 86 -2237 2546 57 0 0 chr15 19787019 19787316 -81593205 - AluY SINE Alu -14 297 1 1436 190 117 56 chr15 19787316 19787617 -81592904 + MER47B DNA MER2_type 86 418 0 3475 173 58 6 chr15 19787617 19788027 -81592494 - L1MA8 LINE L1 -1097 5194 4807 1022 98 0 0 chr15 19788027 19788159 -81592362 - AluY SINE Alu -179 132 1 1354 177 24 0 chr15 19788166 19788414 -81592107 - L1MA8 LINE L1 -1330 4816 4563 1695 195 25 6 chr15 19789681 19790040 -81590481 - L1MA8 LINE L1 -1613 4533 4168 613 167 0 9 chr15 19790041 19790149 -81590372 + AluSq/x SINE Alu 2 108 -205 1686 126 0 4 chr15 19790149 19790388 -81590133 + AluSx SINE Alu 62 299 -13 2341 75 16 0 chr15 19790717 19791023 -81589498 - AluY SINE Alu 0 311 1 449 248 9 12 chr15 19791177 19791322 -81589199 - L1MEc LINE L1 -3969 2611 2430 257 189 0 19 chr15 19791499 19791552 -81588969 + MLT1A1 LTR MaLR 82 133 -232 252 207 92 23 chr15 19791554 19791641 -81588880 + L1MC4 LINE L1 7948 8040 -2 2414 154 9 16 chr15 19792994 19793430 -81587091 + L1MB8 LINE L1 4548 4980 -1166 274 226 7 55 chr15 19793541 19793687 -81586834 + (CACCC)n Simple_repeat Simple_repeat 4 142 0 1088 215 45 78 chr15 19793822 19793881 -81586640 + L1MB8 LINE L1 5767 5826 -352 1424 200 6 72 chr15 19793881 19794201 -81586320 + AluJb SINE Alu 1 299 -13 1088 215 45 78 chr15 19794201 19794243 -81586278 + L1MB8 LINE L1 5826 5868 -310 2272 93 3 0 chr15 19794243 19794533 -81585988 - AluSg SINE Alu -19 291 1 1088 215 45 78 chr15 19794533 19794830 -81585691 + L1MB8 LINE L1 5868 6153 -25 316 89 18 0 chr15 19794944 19795000 -81585521 + L1MB8 LINE L1 6122 6178 0 858 217 84 113 chr15 19796340 19796755 -81583766 + L1MD3 LINE L1 6486 6888 -1107 229 218 0 0 chr15 19796759 19796814 -81583707 + L1MD3 LINE L1 7009 7063 -932 * 1899 188 32 34 chr15 19796805 19798006 -81582515 + L1MB1 LINE L1 4785 6129 -39 1278 130 10 0 chr15 19798008 19798200 -81582321 + AluSq SINE Alu 1 194 -119 652 217 0 0 chr15 19798457 19798586 -81581935 + AluJb SINE Alu 184 312 0 1161 242 16 3 chr15 19798690 19799000 -81581521 + L1M4 LINE L1 4086 4399 -1747 24 67 0 0 chr15 19799038 19799083 -81581438 + AT_rich Low_complexity Low_complexity 1 45 0 573 28 0 0 chr15 19799083 19799154 -81581367 + (GAAA)n Simple_repeat Simple_repeat 2 72 0 1480 315 15 28 chr15 19799154 19799700 -81580821 + L1MA2 LINE L1 53 591 -6439 363 183 0 61 chr15 19799826 19799908 -81580613 + L1MA2 LINE L1 1811 1887 -5143 644 175 73 58 chr15 19799914 19799942 -81580579 + L1MA2 LINE L1 3181 3207 -3899 2572 47 3 0 chr15 19799942 19800241 -81580280 + AluY SINE Alu 1 300 -11 644 175 73 58 chr15 19800241 19800418 -81580103 + L1MA2 LINE L1 3207 3389 -3717 3623 182 32 18 chr15 19800422 19800696 -81579825 + L1MA2 LINE L1 5479 5747 -1513 2274 112 3 3 chr15 19800696 19801001 -81579520 + AluSp SINE Alu 1 305 -8 3623 182 32 18 chr15 19801001 19801836 -81578685 + L1MA2 LINE L1 5747 6606 -654 2402 165 55 32 chr15 19801836 19802112 -81578409 + Tigger1 DNA MER2_type 1 294 -2124 1776 178 0 13 chr15 19802112 19802421 -81578100 + AluSx SINE Alu 1 305 -7 2402 165 55 32 chr15 19802421 19802616 -81577905 + Tigger1 DNA MER2_type 294 483 -1935 1970 183 52 54 chr15 19802623 19803126 -81577395 - L1 LINE L1 -774 5372 4871 1687 129 0 0 chr15 19803126 19803374 -81577147 + L1MA2 LINE L1 6609 6856 -409 5282 77 29 1 chr15 19803378 19804198 -81576323 + MER11D LTR ERVK 6 897 0 1668 115 33 4 chr15 19804198 19804468 -81576053 + L1MA2 LINE L1 6851 7128 -136 1776 127 71 4 chr15 19804468 19804736 -81575785 - AluSc SINE Alu -2 307 22 1822 226 59 22 chr15 19804736 19805281 -81575240 + L1MC3 LINE L1 4419 4983 -1163 1888 242 78 30 chr15 19805292 19805920 -81574601 + L1MC3 LINE L1 5905 6562 -1223 1073 161 14 14 chr15 19805915 19806126 -81574395 - L1 LINE L1 -1206 4940 4730 * 644 182 91 28 chr15 19806159 19806302 -81574219 + L1MD3 LINE L1 7386 7687 -271 546 278 149 25 chr15 19806321 19806774 -81573747 + MLT1E LTR MaLR 30 593 0 1095 194 43 8 chr15 19806780 19807038 -81573483 + L1MD3 LINE L1 7728 7994 -1 225 358 0 0 chr15 19809706 19809773 -81570748 + HsTC2 DNA Tc2 88 154 -1744 * 981 270 74 25 chr15 19809770 19810215 -81570306 + HsTC2 DNA Tc2 1233 1875 -23 281 322 17 9 chr15 19810256 19810371 -81570150 - MIR SINE MIR -7 255 140 234 309 61 40 chr15 19810516 19810843 -81569678 - L1M4 LINE L1 -1050 5096 4763 212 329 0 14 chr15 19811108 19811248 -81569273 + (CA)n Simple_repeat Simple_repeat 1 138 0 423 106 0 0 chr15 19811442 19811508 -81569013 + (TCC)n Simple_repeat Simple_repeat 1 66 0 624 194 0 0 chr15 19811508 19811611 -81568910 - AluJb SINE Alu -18 294 192 1633 183 3 14 chr15 19811834 19812124 -81568397 - AluJb SINE Alu -25 287 1 414 244 70 13 chr15 19813621 19813777 -81566744 - MER104 DNA Tc2 -1 179 15 192 27 81 0 chr15 19814426 19814463 -81566058 + A-rich Low_complexity Low_complexity 2 41 0 1193 203 78 16 chr15 19816140 19816200 -81564321 - L1MA8 LINE L1 0 6291 6236 2196 192 46 2 chr15 19816200 19816659 -81563862 - L1PA16 LINE L1 -3 6163 5685 1193 203 78 16 chr15 19816659 19816918 -81563603 - L1MA8 LINE L1 -55 6236 5952 2096 133 6 14 chr15 19817400 19817745 -81562776 + L1PB1 LINE L1 5804 6145 -6 2330 94 3 0 chr15 19817757 19818045 -81562476 - AluSp SINE Alu -24 289 1 2953 29 0 0 chr15 19818045 19818387 -81562134 + L1PA3 LINE L1 5814 6155 0 288 205 167 0 chr15 19818760 19818838 -81561683 + MLT1J2 LTR MaLR 72 162 -288 325 276 48 9 chr15 19819452 19819557 -81560964 - MER5A DNA MER1_type -22 167 59 4188 117 93 127 chr15 19819657 19821082 -81559439 - pTR5 LTR ERV1 0 2438 743 2334 156 36 7 chr15 19821165 19821581 -81558940 + MSTA LTR MaLR 1 428 0 4016 170 28 66 chr15 19822505 19823729 -81556792 - L1MA7 LINE L1 0 6291 5022 2289 96 7 0 chr15 19823729 19824031 -81556490 - AluSg SINE Alu -6 304 1 4016 170 28 66 chr15 19824031 19824171 -81556350 - L1MA7 LINE L1 -1269 5022 4878 1865 137 32 3 chr15 19824171 19824455 -81556066 - AluSx SINE Alu -20 292 1 4016 170 28 66 chr15 19824455 19824914 -81555607 - L1MA7 LINE L1 -1413 4878 4548 308 221 77 19 chr15 19826264 19826368 -81554153 - L1MC4 LINE L1 -2 8040 7931 728 274 109 77 chr15 19826468 19827092 -81553429 - L1MC4 LINE L1 -275 7767 7124 284 143 18 0 chr15 19827129 19827185 -81553336 + (TCTA)n Simple_repeat Simple_repeat 4 60 0 1001 227 78 34 chr15 19827186 19827543 -81552978 - L1ME1 LINE L1 -4 6162 5790 2679 176 54 12 chr15 19827548 19828123 -81552398 - L1MD3 LINE L1 0 7995 7397 610 242 110 11 chr15 19828138 19828320 -81552201 + MLT1G LTR MaLR 319 518 -72 1229 189 22 76 chr15 19828329 19828684 -81551837 - L1MD3 LINE L1 -877 7118 6783 294 50 0 0 chr15 19828684 19828724 -81551797 + (TTTG)n Simple_repeat Simple_repeat 3 42 0 815 120 0 0 chr15 19828724 19828832 -81551689 - AluSp/q SINE Alu -32 281 174 503 275 8 0 chr15 19828882 19829002 -81551519 - L1MC4a LINE L1 -1081 6727 6607 524 283 68 25 chr15 19830593 19830830 -81549691 + MIR SINE MIR 8 254 -8 496 221 130 10 chr15 19831561 19831769 -81548752 + MER114 LTR ERV 142 374 -274 21 0 0 0 chr15 19831780 19831801 -81548720 + AT_rich Low_complexity Low_complexity 1 21 0 1260 202 98 12 chr15 19832136 19832463 -81548058 - L1ME2 LINE L1 -21 6423 6069 875 253 114 24 chr15 19832804 19833436 -81547085 - L1ME2 LINE L1 -1077 5349 4661 460 338 39 42 chr15 19833759 19834093 -81546428 - L1ME2 LINE L1 -4213 2394 2062 996 247 117 6 chr15 19834175 19834499 -81546022 - MLT1A1 LTR MaLR 0 365 6 1620 199 50 8 chr15 19834504 19834865 -81545656 - MLT1A1-int LTR MaLR 0 1735 1360 286 243 20 25 chr15 19834861 19834994 -81545527 - L1ME2 LINE L1 -4891 1525 1235 * 21 0 0 0 chr15 19835232 19835253 -81545268 + AT_rich Low_complexity Low_complexity 1 21 0 325 296 93 57 chr15 19836617 19836897 -81543624 + MLT1I LTR MaLR 102 391 -18 301 228 22 22 chr15 19838723 19838815 -81541706 + L1MEd LINE L1 1137 1228 -4891 * 982 162 50 10 chr15 19838811 19839009 -81541512 + MLT1I-int LTR MaLR 1360 1565 -170 247 293 151 42 chr15 19839114 19839353 -81541168 + MLT1I LTR MaLR 126 390 -19 2164 117 0 0 chr15 19839895 19840186 -81540335 - AluSx SINE Alu -21 291 1 2797 175 44 39 chr15 19840569 19840888 -81539633 + L1MC3 LINE L1 7076 7392 -393 1824 141 7 14 chr15 19840888 19841192 -81539329 + AluSx SINE Alu 3 304 0 2797 175 44 39 chr15 19841192 19841546 -81538975 + L1MC3 LINE L1 7392 7754 -31 1474 273 115 16 chr15 19844111 19844913 -81535608 - L1ME2 LINE L1 -3 6161 5281 320 286 35 35 chr15 19844941 19845140 -81535381 - L1ME2 LINE L1 -981 5165 4967 253 336 19 0 chr15 19845286 19845393 -81535128 + L1MCb LINE L1 325 433 -5612 1617 233 72 39 chr15 19845533 19846268 -81534253 + L1MCb LINE L1 539 1302 -4873 645 159 0 0 chr15 19846268 19846375 -81534146 + U6 snRNA snRNA 1 107 0 1617 233 72 39 chr15 19846375 19846401 -81534120 + L1MCb LINE L1 1302 1326 -4849 601 263 97 0 chr15 19846401 19846629 -81533892 + L1MCb LINE L1 2639 2888 -3676 10127 203 19 19 chr15 19846770 19848665 -81531856 + L1PA16 LINE L1 2900 4793 -1791 2487 66 0 0 chr15 19848665 19848967 -81531554 + AluY SINE Alu 1 302 -9 10127 203 19 19 chr15 19848967 19849231 -81531290 + L1PA16 LINE L1 4793 5055 -1529 1903 161 30 25 chr15 19849231 19849592 -81530929 - THE1B LTR MaLR -1 363 1 10127 203 19 19 chr15 19849592 19851118 -81529403 + L1PA16 LINE L1 5055 6581 -3 270 203 14 72 chr15 19851119 19851257 -81529264 + L1MC3 LINE L1 1152 1281 -5145 309 135 0 0 chr15 19851415 19851467 -81529054 + (CA)n Simple_repeat Simple_repeat 2 53 0 288 210 10 40 chr15 19851470 19851570 -81528951 + L1MC3 LINE L1 1438 1534 -4892 2729 255 76 50 chr15 19851636 19852446 -81528075 + L1MC3 LINE L1 3559 4426 -2000 4600 15 0 2 chr15 19852446 19852970 -81527551 - L1PA3 LINE L1 -4 6151 5629 2729 255 76 50 chr15 19852970 19853653 -81526868 + L1MC3 LINE L1 4426 5090 -1336 317 175 4 256 chr15 19854029 19854167 -81526354 + L1MC3 LINE L1 5126 5163 -1263 2097 131 3 0 chr15 19854167 19854458 -81526063 + AluSq SINE Alu 1 292 -21 317 175 4 256 chr15 19854458 19854593 -81525928 + L1MC3 LINE L1 5163 5330 -1096 1774 186 68 28 chr15 19854593 19855096 -81525425 + MLT2A2 LTR ERVL 2 554 0 401 257 62 24 chr15 19855102 19855312 -81525209 + L1MC3 LINE L1 5331 5548 -878 686 239 19 6 chr15 19855315 19855474 -81525047 + AluJb SINE Alu 1 161 -151 422 221 0 0 chr15 19855527 19855613 -81524908 - Tigger7 DNA MER2_type -1 2486 2401 1010 131 47 0 chr15 19855635 19855826 -81524695 - Tigger7 DNA MER2_type -219 514 315 2066 187 30 117 chr15 19855827 19855935 -81524586 + LTR8 LTR ERV1 4 120 -571 2607 93 6 0 chr15 19855935 19856288 -81524233 - THE1A LTR MaLR 0 355 1 11277 96 7 13 chr15 19856288 19857877 -81522644 - THE1A-int LTR MaLR 0 1580 1 2579 88 6 30 chr15 19857877 19858005 -81522516 - THE1A LTR MaLR 0 355 225 2497 67 0 0 chr15 19858005 19858302 -81522219 - AluY SINE Alu -14 297 1 2579 88 6 30 chr15 19858302 19858537 -81521984 - THE1A LTR MaLR -130 225 1 2066 187 30 117 chr15 19858537 19859179 -81521342 + LTR8 LTR ERV1 117 691 0 1385 192 15 4 chr15 19859179 19859438 -81521083 - Tigger7 DNA MER2_type -2167 320 59 3184 189 52 14 chr15 19859475 19860243 -81520278 + L1MC3 LINE L1 5592 6388 -1677 22 0 0 0 chr15 19861460 19861482 -81519039 + AT_rich Low_complexity Low_complexity 1 22 0 189 387 91 5 chr15 19864192 19864378 -81516143 + L2 LINE L2 815 1016 -2298 3375 191 20 26 chr15 19864509 19865300 -81515221 - L1MB3 LINE L1 -1 6182 5397 367 287 17 6 chr15 19865451 19865625 -81514896 + L1M4 LINE L1 2742 2917 -3229 2955 280 40 68 chr15 19865645 19866761 -81513760 - MER21-int LTR ERV1 -781 3410 2341 3661 110 178 0 chr15 19866761 19867345 -81513176 - LTR12 LTR ERV1 0 688 1 2955 280 40 68 chr15 19867345 19867665 -81512856 - MER21-int LTR ERV1 -1850 2341 2014 2263 172 17 2 chr15 19868028 19868436 -81512085 + MSTB1 LTR MaLR 4 417 -15 2038 158 3 0 chr15 19868856 19869167 -81511354 + AluSx SINE Alu 1 312 0 222 191 0 0 chr15 19869189 19869236 -81511285 + (TG)n Simple_repeat Simple_repeat 2 48 0 2312 76 0 45 chr15 19869436 19869750 -81510771 + AluY SINE Alu 2 301 -10 594 311 10 19 chr15 19869821 19870027 -81510494 - MER21-int LTR ERV1 -2319 1872 1669 815 307 86 79 chr15 19870206 19871322 -81509199 + L1MA4 LINE L1 280 1403 -5446 229 300 0 0 chr15 19871386 19871446 -81509075 - L1M2b LINE L1 -6471 738 679 2214 194 10 12 chr15 19871532 19872048 -81508473 + L1MA4 LINE L1 1419 1933 -4916 260 98 0 39 chr15 19872062 19872113 -81508408 + Alu SINE Alu 253 301 0 1479 227 47 31 chr15 19872118 19872943 -81507578 + L1MA4 LINE L1 2598 3433 -3415 1233 326 14 15 chr15 19872943 19873535 -81506986 - MER21-int LTR ERV1 -3089 3669 3079 205 138 0 0 chr15 19873535 19873564 -81506957 + (GAA)n Simple_repeat Simple_repeat 2 30 0 1781 244 42 72 chr15 19873634 19874102 -81506419 - MER77 LTR ERV1 -8 597 150 2435 83 0 3 chr15 19874102 19874414 -81506107 + AluY SINE Alu 1 311 0 1781 244 42 72 chr15 19874414 19874560 -81505961 - MER77 LTR ERV1 -455 150 1 1761 280 50 30 chr15 19874571 19875511 -81505010 + L1MA4 LINE L1 4336 5294 -1554 395 285 5 24 chr15 19875519 19875726 -81504795 + L1M4c LINE L1 2000 2202 -4182 1720 116 0 0 chr15 19875731 19875956 -81504565 + AluSc SINE Alu 58 282 -27 22 35 0 0 chr15 19875956 19875985 -81504536 + AT_rich Low_complexity Low_complexity 1 29 0 3430 157 26 26 chr15 19875999 19876062 -81504459 + L1MA4 LINE L1 5694 5756 -1246 1954 129 0 0 chr15 19876062 19876325 -81504196 + AluSx SINE Alu 34 296 -16 3430 157 26 26 chr15 19876325 19876809 -81503712 + L1MA4 LINE L1 5756 6243 -759 2648 20 0 0 chr15 19876809 19877107 -81503414 + AluYa5 SINE Alu 1 298 -13 3430 157 26 26 chr15 19877107 19877508 -81503013 + L1MA4 LINE L1 6243 6643 -359 2018 107 13 0 chr15 19877523 19877822 -81502699 - L1P3 LINE L1 -426 5728 5426 385 41 0 0 chr15 19877822 19877870 -81502651 + L1PA7 LINE L1 6098 6146 -8 2385 86 0 10 chr15 19877894 19878207 -81502314 + AluY SINE Alu 1 310 -1 21 71 0 0 chr15 19878283 19878325 -81502196 + AT_rich Low_complexity Low_complexity 1 42 0 1034 181 48 4 chr15 19878325 19878552 -81501969 + L1MA4 LINE L1 6648 6884 -118 * 2623 80 0 0 chr15 19878545 19878909 -81501612 - L1M1 LINE L1 -525 5779 5416 572 81 23 0 chr15 19878909 19878982 -81501539 + L1MA1 LINE L1 6211 6298 -4 517 192 8 0 chr15 19878988 19879118 -81501403 + L1MA4A LINE L1 6870 7000 -5 4804 256 75 17 chr15 19879122 19880194 -81500327 + L1M4c LINE L1 2221 3229 -3153 2231 113 0 3 chr15 19880194 19880495 -81500026 + AluSq SINE Alu 1 300 -13 4804 256 75 17 chr15 19880495 19881798 -81498723 + L1M4c LINE L1 3229 4729 -1653 897 196 18 5 chr15 19881801 19882020 -81498501 - L1 LINE L1 -1557 4589 4368 2629 176 41 9 chr15 19882022 19882561 -81497960 + L1PA16 LINE L1 5609 6164 -2 997 226 75 81 chr15 19882567 19882633 -81497888 + L1M4c LINE L1 4726 4791 -1591 1578 239 23 8 chr15 19882633 19883023 -81497498 + MSTD LTR MaLR 1 396 0 997 226 75 81 chr15 19883023 19883511 -81497010 + L1M4c LINE L1 4791 5278 -1104 188 35 35 0 chr15 19883511 19883540 -81496981 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 997 226 75 81 chr15 19883540 19883687 -81496834 + L1M4c LINE L1 5278 5424 -958 342 177 0 0 chr15 19883687 19883749 -81496772 + AluJ/FLAM SINE Alu 1 62 -240 856 168 0 66 chr15 19883749 19883794 -81496727 + L1MB7 LINE L1 5986 6032 -152 2099 133 0 0 chr15 19883794 19884096 -81496425 - AluSx SINE Alu -10 302 1 856 168 0 66 chr15 19884096 19884246 -81496275 + L1MB7 LINE L1 6032 6168 -16 1208 227 52 44 chr15 19884254 19884741 -81495780 + L1MD1 LINE L1 4769 5260 -923 5884 21 0 0 chr15 19884741 19885417 -81495104 + L1PA3 LINE L1 5478 6153 -2 1208 227 52 44 chr15 19885417 19885600 -81494921 + L1MD1 LINE L1 5260 5440 -743 950 149 37 80 chr15 19885600 19885709 -81494812 + AluJo SINE Alu 1 100 -212 1740 48 5 0 chr15 19885709 19885918 -81494603 - AluY SINE Alu 0 311 102 950 149 37 80 chr15 19885918 19885996 -81494525 + AluJo SINE Alu 100 180 -132 311 154 0 0 chr15 19885997 19886049 -81494472 + AluJo SINE Alu 83 134 -168 573 203 152 0 chr15 19886085 19886223 -81494298 + AluJo SINE Alu 138 296 -6 2285 231 89 16 chr15 19886234 19886976 -81493545 + L1MD1 LINE L1 5428 6223 -19 390 195 8 24 chr15 19886984 19887107 -81493414 + L1MC/D LINE L1 4317 4437 -1709 22 0 0 0 chr15 19888075 19888097 -81492424 + AT_rich Low_complexity Low_complexity 1 22 0 302 311 79 66 chr15 19888633 19888951 -81491570 + L1ME4a LINE L1 5601 5922 -199 22 35 0 0 chr15 19889272 19889301 -81491220 + AT_rich Low_complexity Low_complexity 1 29 0 214 135 19 19 chr15 19889398 19889450 -81491071 + A-rich Low_complexity Low_complexity 3 54 0 293 274 43 26 chr15 19889587 19889704 -81490817 - MIR SINE MIR -94 168 50 384 168 38 23 chr15 19889807 19889938 -81490583 + CT-rich Low_complexity Low_complexity 2 134 0 189 74 0 0 chr15 19890406 19890433 -81490088 + (A)n Simple_repeat Simple_repeat 1 27 0 2119 113 3 7 chr15 19890933 19891243 -81489278 + AluSx SINE Alu 1 309 -3 347 252 148 82 chr15 19891388 19891658 -81488863 + L1ME LINE L1 5487 5774 -347 2528 60 0 0 chr15 19891748 19892047 -81488474 + AluY SINE Alu 1 299 -12 324 236 126 50 chr15 19892222 19892421 -81488100 + L1MC/D LINE L1 5257 5470 -2338 198 0 0 0 chr15 19892527 19892549 -81487972 + (TTTTTG)n Simple_repeat Simple_repeat 2 23 0 2201 129 0 3 chr15 19892611 19892921 -81487600 + AluSx SINE Alu 1 309 -3 2127 106 30 0 chr15 19893998 19894300 -81486221 + AluY SINE Alu 1 311 0 608 260 27 18 chr15 19894420 19894643 -81485878 + L1MEc LINE L1 444 668 -5728 409 298 95 34 chr15 19894654 19895097 -81485424 + L1MEc LINE L1 703 1172 -5224 347 301 36 30 chr15 19895155 19895517 -81485004 + L1MEc LINE L1 1309 1672 -4724 299 301 59 30 chr15 19895552 19895630 -81484891 + L1MB5 LINE L1 36 110 -6432 215 31 31 0 chr15 19895630 19895662 -81484859 + (TAA)n Simple_repeat Simple_repeat 1 33 0 299 301 59 30 chr15 19895662 19895786 -81484735 + L1MB5 LINE L1 110 244 -6298 2301 76 0 3 chr15 19895847 19896150 -81484371 + AluY SINE Alu 1 302 -9 964 223 137 42 chr15 19896294 19896348 -81484173 + L1M4 LINE L1 5220 5267 -907 1787 215 3 8 chr15 19896348 19896715 -81483806 - MLT1A1 LTR MaLR 0 365 1 964 223 137 42 chr15 19896715 19897078 -81483443 + L1M4 LINE L1 5267 5678 -496 1661 185 10 3 chr15 19897131 19897428 -81483093 + AluJb SINE Alu 12 310 -2 991 197 43 36 chr15 19897430 19897734 -81482787 + L1MB5 LINE L1 1931 2236 -4408 450 160 13 173 chr15 19897712 19897937 -81482584 - L1M4 LINE L1 -2240 3906 3718 * 2101 244 45 6 chr15 19897941 19898634 -81481887 + L1MB5 LINE L1 5728 6451 -221 723 181 30 0 chr15 19898643 19898809 -81481712 + L1MB5 LINE L1 6496 6666 -6 295 283 0 19 chr15 19898812 19898918 -81481603 + L1MEc LINE L1 1666 1769 -4627 744 260 0 40 chr15 19898918 19899141 -81481380 + MER20 DNA MER1_type 1 214 -5 391 218 23 74 chr15 19899202 19899418 -81481103 + L1MEc LINE L1 1837 2041 -4355 1337 227 42 62 chr15 19899612 19900211 -81480310 - L1M4 LINE L1 -2242 3904 3318 656 265 29 23 chr15 19900481 19900832 -81479689 - L1MCa LINE L1 -5711 334 2 715 230 22 0 chr15 19900834 19901012 -81479509 - L1MD3 LINE L1 -419 7576 7395 289 262 75 37 chr15 19901017 19901124 -81479397 - MLT1F1 LTR MaLR -456 111 1 562 298 21 0 chr15 19901130 19901321 -81479200 - L1MD3 LINE L1 -727 7268 7074 1992 112 10 10 chr15 19901381 19901676 -81478845 - AluY SINE Alu -16 295 1 1160 152 28 5 chr15 19901677 19901894 -81478627 - L1M4 LINE L1 -479 5705 5484 3257 182 95 33 chr15 19902091 19902286 -81478235 - L1MB3 LINE L1 -1 6182 6000 1835 155 7 17 chr15 19902286 19902583 -81477938 - AluJo SINE Alu -18 294 1 3257 182 95 33 chr15 19902583 19903201 -81477320 - L1MB3 LINE L1 -183 6000 5319 248 160 13 27 chr15 19903319 19903394 -81477127 + L1ME1 LINE L1 5293 5366 -2629 2142 71 0 0 chr15 19904134 19904401 -81476120 - AluY SINE Alu -43 268 2 2398 125 17 3 chr15 19904631 19904990 -81475531 - THE1B LTR MaLR 0 364 1 1294 243 133 41 chr15 19905106 19905646 -81474875 - MLT1G LTR MaLR 0 590 1 4571 158 23 33 chr15 19905740 19907187 -81473334 - L1MA8 LINE L1 -5 6286 4855 322 294 33 39 chr15 19907825 19907978 -81472543 + MLT1I LTR MaLR 250 401 -8 318 50 0 0 chr15 19908100 19908140 -81472381 + (TCCC)n Simple_repeat Simple_repeat 1 40 0 * 972 49 0 0 chr15 19908139 19908261 -81472260 + (TTTC)n Simple_repeat Simple_repeat 4 125 0 1879 137 6 29 chr15 19908296 19908610 -81471911 - AluSg SINE Alu -3 307 1 2019 119 11 0 chr15 19908858 19909136 -81471385 + AluSx SINE Alu 1 281 -31 227 241 21 21 chr15 19909309 19909450 -81471071 + (TTGTG)n Simple_repeat Simple_repeat 1 141 0 2532 56 10 3 chr15 19909955 19910259 -81470262 + AluY SINE Alu 1 306 -5 919 278 39 30 chr15 19910284 19910690 -81469831 + L1ME1 LINE L1 5550 5959 -207 432 0 0 0 chr15 19911036 19911084 -81469437 + (CA)n Simple_repeat Simple_repeat 2 49 0 1715 133 98 11 chr15 19911245 19911530 -81468991 - AluSx SINE Alu -2 310 1 270 0 0 0 chr15 19911539 19911569 -81468952 + (CAAAAA)n Simple_repeat Simple_repeat 3 32 0 2477 183 17 17 chr15 19911680 19912206 -81468315 + L1PA16 LINE L1 5625 6150 -16 1103 222 19 12 chr15 19912224 19912548 -81467973 - L1MB3 LINE L1 -798 5348 5023 * 3486 129 5 7 chr15 19912521 19913117 -81467404 - L1P LINE L1 -849 5297 4703 1308 209 13 7 chr15 19913115 19913416 -81467105 - L1MB3 LINE L1 -1898 4248 3946 * 3867 172 7 12 chr15 19913469 19914218 -81466303 + L1PB4 LINE L1 5411 6155 -1 1102 265 21 9 chr15 19914220 19914358 -81466163 - L1MB8 LINE L1 -55 6123 5988 1688 169 14 3 chr15 19914358 19914520 -81466001 - AluSx SINE Alu -19 293 125 378 57 0 0 chr15 19914520 19914573 -81465948 + (TG)n Simple_repeat Simple_repeat 2 54 0 1688 169 14 3 chr15 19914573 19914700 -81465821 - AluSx SINE Alu -187 125 1 1102 265 21 9 chr15 19914700 19914938 -81465583 - L1MB8 LINE L1 -190 5988 5746 593 300 113 32 chr15 19915365 19915860 -81464661 + L1ME1 LINE L1 37 419 -5278 2429 90 0 6 chr15 19915860 19916172 -81464349 + AluSp SINE Alu 1 310 -3 593 300 113 32 chr15 19916172 19916499 -81464022 + L1ME1 LINE L1 419 718 -4979 2450 266 59 13 chr15 19916529 19917368 -81463153 + L1ME1 LINE L1 4270 5187 -1048 642 121 0 17 chr15 19917368 19917484 -81463037 - L1PA13 LINE L1 0 6163 6050 2450 266 59 13 chr15 19917484 19918010 -81462511 + L1ME1 LINE L1 5187 5687 -548 1131 256 66 5 chr15 19918017 19918428 -81462093 + L1ME1 LINE L1 5785 6220 -15 21 0 0 0 chr15 19918491 19918512 -81462009 + AT_rich Low_complexity Low_complexity 1 21 0 4920 167 119 7 chr15 19918513 19920033 -81460488 - L1MA6 LINE L1 -4 6296 4539 210 23 70 23 chr15 19920033 19920076 -81460445 + (TTTG)n Simple_repeat Simple_repeat 2 46 0 4920 167 119 7 chr15 19920076 19920308 -81460213 - L1MA6 LINE L1 -1761 4539 4334 698 117 55 6 chr15 19922389 19922552 -81457969 + GA-rich Low_complexity Low_complexity 2 172 0 970 270 62 75 chr15 19923370 19923996 -81456525 + L1ME LINE L1 78 695 -5375 22 0 0 0 chr15 19924298 19924320 -81456201 + AT_rich Low_complexity Low_complexity 1 22 0 226 98 39 0 chr15 19924541 19924592 -81455929 + (TG)n Simple_repeat Simple_repeat 2 54 0 453 224 28 7 chr15 19924707 19924850 -81455671 - L1ME3A LINE L1 -31 6139 5994 263 298 53 57 chr15 19925617 19925845 -81454676 - L2 LINE L2 -1285 2029 1803 374 313 144 23 chr15 19928155 19928411 -81452110 - L1MC4a LINE L1 -1962 5846 5560 522 303 117 36 chr15 19929001 19929643 -81450878 - L2 LINE L2 0 3313 2579 1461 183 14 21 chr15 19930253 19930538 -81449983 + AluJo SINE Alu 20 302 -10 383 229 92 0 chr15 19931509 19931618 -81448903 + MER5A DNA MER1_type 52 170 -19 460 346 79 31 chr15 19932189 19932608 -81447913 - L2 LINE L2 -678 2636 2198 807 34 61 0 chr15 19933051 19933199 -81447322 + (TA)n Simple_repeat Simple_repeat 2 158 0 251 187 243 37 chr15 19933243 19933350 -81447171 - MLT1H LTR MaLR -9 540 412 270 347 100 20 chr15 19933722 19933973 -81446548 - L2 LINE L2 -1185 2129 1859 317 244 49 0 chr15 19934880 19934962 -81445559 - L1MC4 LINE L1 -16 8026 7941 1778 251 153 6 chr15 19935083 19935868 -81444653 - L1MC4 LINE L1 -144 7898 6999 442 211 28 20 chr15 19935865 19936493 -81444028 - L1MC3 LINE L1 0 7785 6139 * 239 273 34 0 chr15 19936493 19936581 -81443940 - MLT1F1 LTR MaLR -442 125 35 260 169 15 15 chr15 19936605 19936670 -81443851 - L1MC4a LINE L1 -930 6878 6814 2368 50 3 0 chr15 19937818 19938101 -81442420 - AluY SINE Alu -24 287 4 264 232 12 0 chr15 19938275 19938357 -81442164 + (TA)n Simple_repeat Simple_repeat 1 83 0 2044 115 3 7 chr15 19938653 19938948 -81441573 + AluSq SINE Alu 1 294 -19 216 324 81 37 chr15 19941500 19941636 -81438885 - MIR SINE MIR -110 152 11 263 281 52 72 chr15 19941691 19941997 -81438524 - L1ME LINE L1 -279 5842 5543 198 351 0 0 chr15 19942774 19942848 -81437673 + MIR SINE MIR 188 261 -1 313 188 12 12 chr15 19943526 19943606 -81436915 - L1MD3 LINE L1 -86 7909 7830 587 72 0 0 chr15 19943606 19943689 -81436832 - Alu SINE Alu -6 303 221 5255 101 95 1 chr15 19943816 19944571 -81435950 + LTR12 LTR ERV1 1 826 0 2267 85 0 13 chr15 19944607 19944912 -81435609 - AluY SINE Alu -10 301 1 1840 283 107 26 chr15 19945082 19946142 -81434379 - L1MEc LINE L1 -5138 1258 114 2199 194 33 5 chr15 19946659 19947108 -81433413 + L1PA15 LINE L1 5704 6165 0 337 196 41 0 chr15 19949205 19949302 -81431219 - L1MCa LINE L1 -3024 3402 3302 881 196 41 21 chr15 19949304 19949621 -81430900 - L1MCa LINE L1 -3963 2463 2247 779 198 211 0 chr15 19949639 19949886 -81430635 + L1MCa LINE L1 1921 2219 -4207 624 260 51 23 chr15 19949886 19950199 -81430322 - MLT1E LTR MaLR -248 345 1 398 230 25 93 chr15 19950203 19950288 -81430233 - L1MD3 LINE L1 -282 7713 7643 2171 93 0 10 chr15 19950288 19950578 -81429943 - AluY SINE Alu -11 300 14 398 230 25 93 chr15 19950578 19950653 -81429868 - L1MD3 LINE L1 -352 7643 7564 3955 220 101 75 chr15 19950846 19951067 -81429454 - L1MC2 LINE L1 -3 7770 7556 1772 141 0 4 chr15 19951067 19951336 -81429185 - AluY SINE Alu -13 298 31 3955 220 101 75 chr15 19951336 19951566 -81428955 - L1MC2 LINE L1 -217 7556 7334 3719 113 143 2 chr15 19951566 19952169 -81428352 - LTR12 LTR ERV1 0 688 1 3955 220 101 75 chr15 19952169 19952346 -81428175 - L1MC2 LINE L1 -439 7334 7163 2171 110 3 3 chr15 19952346 19952647 -81427874 + AluY SINE Alu 1 301 -10 3955 220 101 75 chr15 19952647 19953671 -81426850 - L1MC2 LINE L1 -610 7163 6097 2358 85 10 0 chr15 19953671 19953966 -81426555 + AluSx SINE Alu 1 298 -14 3955 220 101 75 chr15 19953966 19954217 -81426304 - L1MC2 LINE L1 -1676 6097 5854 3621 215 52 32 chr15 19954217 19955592 -81424929 - L1MC2 LINE L1 -720 5454 4044 782 232 29 79 chr15 19955661 19955918 -81424603 - L1MC2 LINE L1 -2302 3844 3607 185 0 40 0 chr15 19955918 19955943 -81424578 + (TTG)n Simple_repeat Simple_repeat 2 27 0 782 232 29 79 chr15 19955943 19956025 -81424496 - L1MC2 LINE L1 -2539 3607 3522 352 241 46 8 chr15 19956027 19956214 -81424307 + MLT1E LTR MaLR 346 585 -8 830 202 51 20 chr15 19956217 19956470 -81424051 + L1MD3 LINE L1 7721 7981 -14 1490 190 64 39 chr15 19958433 19958823 -81421698 - MSTB1 LTR MaLR 0 432 33 2327 87 3 22 chr15 19958824 19959135 -81421386 - AluSp SINE Alu -8 305 1 2588 214 33 48 chr15 19959136 19959225 -81421296 + MER54A LTR ERVL 188 277 -624 2147 137 0 6 chr15 19959225 19959538 -81420983 - AluSx SINE Alu -1 311 1 2588 214 33 48 chr15 19959538 19960173 -81420348 + MER54A LTR ERVL 277 901 0 2198 96 3 3 chr15 19960284 19960577 -81419944 + AluSc SINE Alu 1 293 -16 627 290 69 35 chr15 19960788 19961240 -81419281 + HsTC2 DNA Tc2 1233 1875 -23 2086 105 54 0 chr15 19961554 19961848 -81418673 + AluSx SINE Alu 1 310 -2 482 262 142 21 chr15 19961900 19962067 -81418454 - L1M4 LINE L1 -1125 5021 4817 333 0 0 0 chr15 19962067 19962104 -81418417 + (TG)n Simple_repeat Simple_repeat 2 38 0 482 262 142 21 chr15 19962104 19962169 -81418352 - L1M4 LINE L1 -1329 4817 4761 884 191 7 0 chr15 19963966 19964113 -81416408 - FRAM SINE Alu -30 146 1 2145 100 0 33 chr15 19965004 19965305 -81415216 - AluSc SINE Alu -18 291 1 464 316 82 9 chr15 19965506 19965737 -81414784 - L1MEc LINE L1 -6083 313 66 2232 91 10 0 chr15 19965908 19966205 -81414316 + AluSx SINE Alu 1 300 -12 1385 104 79 5 chr15 19966553 19966755 -81413766 - AluSc SINE Alu -12 297 81 266 252 117 27 chr15 19966778 19966889 -81413632 - HsTC2 DNA Tc2 -546 1352 1232 221 197 26 40 chr15 19967988 19968064 -81412457 + L2 LINE L2 2427 2501 -813 2073 81 34 10 chr15 19968516 19968862 -81411659 - AluSq SINE Alu 0 353 1 528 89 125 54 chr15 19968961 19969073 -81411448 - AluSc SINE Alu 0 309 190 930 101 0 0 chr15 19969073 19969192 -81411329 - AluSq SINE Alu -159 154 36 962 291 42 13 chr15 19969523 19970066 -81410455 - L1M4 LINE L1 -3204 2942 2384 487 192 96 25 chr15 19970114 19970312 -81410209 + L1MCa LINE L1 2008 2219 -4207 353 295 180 25 chr15 19970314 19970514 -81410007 - MLT1E LTR MaLR -250 343 113 6666 19 0 0 chr15 19970536 19971335 -81409186 - L1PA3 LINE L1 0 6155 5357 319 255 9 38 chr15 19971336 19971442 -81409079 - MLT1E LTR MaLR -487 106 4 668 189 26 46 chr15 19971448 19971601 -81408920 - L1MD3 LINE L1 -281 7714 7565 1785 74 0 41 chr15 19971793 19972037 -81408484 - AluY SINE Alu -6 305 72 5028 232 91 34 chr15 19972085 19973953 -81406568 - L1MC2 LINE L1 0 7772 5835 269 188 12 75 chr15 19973934 19973977 -81406544 - L1MC2 LINE L1 -788 5454 5417 * 2037 202 34 7 chr15 19973977 19974392 -81406129 - MSTB LTR MaLR 0 426 1 269 188 12 75 chr15 19974392 19974428 -81406093 - L1MC2 LINE L1 -825 5417 5380 * 1084 241 69 11 chr15 19974423 19974800 -81405721 - L1MC2 LINE L1 -1008 5138 4740 467 118 0 0 chr15 19974800 19974868 -81405653 - AluJ/FLAM SINE Alu -217 95 28 542 179 9 127 chr15 19974872 19975101 -81405420 - L1MC2 LINE L1 -1446 4700 4499 888 177 0 0 chr15 19975130 19975271 -81405250 - FRAM SINE Alu -35 141 1 22 0 0 0 chr15 19975279 19975301 -81405220 + AT_rich Low_complexity Low_complexity 1 22 0 3980 137 46 29 chr15 19975358 19976119 -81404402 - LTR1 LTR ERV1 -11 774 1 736 235 20 44 chr15 19976122 19976373 -81404148 - L1MC2 LINE L1 -2383 3763 3519 392 220 53 53 chr15 19976423 19976573 -81403948 + MLT1E LTR MaLR 475 593 0 969 221 27 8 chr15 19976575 19976837 -81403684 + L1MD3 LINE L1 7724 7990 -5 2224 103 20 0 chr15 19977476 19977776 -81402745 + AluSg SINE Alu 1 306 -4 1635 129 20 106 chr15 19979545 19979680 -81400841 + AluYb8 SINE Alu 1 146 -172 2017 105 51 10 chr15 19979680 19979974 -81400547 + AluSc SINE Alu 1 306 -3 1635 129 20 106 chr15 19979974 19980179 -81400342 + AluYb8 SINE Alu 146 312 -6 4329 198 38 8 chr15 19980194 19981069 -81399452 + MER54A LTR ERVL 1 901 0 273 321 36 0 chr15 19981285 19981397 -81399124 + HsTC2 DNA Tc2 35 150 -1748 * 611 293 75 35 chr15 19981396 19981847 -81398674 + HsTC2 DNA Tc2 1231 1875 -23 317 358 137 4 chr15 19981884 19982110 -81398411 - MIR SINE MIR 0 262 7 277 262 158 32 chr15 19982221 19982442 -81398079 - L1M4 LINE L1 -1125 5021 4773 29 0 0 0 chr15 19984449 19984478 -81396043 + AT_rich Low_complexity Low_complexity 1 29 0 393 315 108 22 chr15 19985249 19985481 -81395040 - L1MEc LINE L1 -6083 313 62 282 305 99 21 chr15 19986429 19986570 -81393951 - MIR SINE MIR -1 261 110 2067 158 3 0 chr15 19986598 19986901 -81393620 - AluSx SINE Alu -8 304 1 223 200 143 76 chr15 19986908 19987013 -81393508 + MER5B DNA MER1_type 5 116 -62 1641 79 0 10 chr15 19987186 19987388 -81393133 - AluSq SINE Alu -113 200 1 200 287 196 28 chr15 19987944 19988087 -81392434 - MIR3 SINE MIR -35 173 7 348 133 33 0 chr15 19988278 19988338 -81392183 + MLT1C LTR MaLR 1 62 -405 2290 163 59 2 chr15 19988765 19989170 -81391351 + MSTA LTR MaLR 1 428 0 433 248 32 6 chr15 19989289 19989446 -81391075 + L2 LINE L2 2429 2589 -725 2094 93 4 0 chr15 19989549 19989827 -81390694 - AluSx SINE Alu -33 279 1 1137 239 64 18 chr15 19990588 19991098 -81389423 + L1MD3 LINE L1 4915 5454 -720 2197 104 10 0 chr15 19991100 19991389 -81389132 - AluSp SINE Alu -21 292 1 442 173 0 39 chr15 19991393 19991497 -81389024 + L1MD3 LINE L1 5854 5953 -2042 1991 213 82 16 chr15 19991619 19992086 -81388435 - L1MC3 LINE L1 -74 7711 7199 2800 7 0 0 chr15 19992086 19992388 -81388133 + AluYa5 SINE Alu 1 302 -9 1991 213 82 16 chr15 19992388 19992483 -81388038 - L1MC3 LINE L1 -586 7199 7112 530 182 0 9 chr15 19992496 19992606 -81387915 - L1PB3 LINE L1 -14 6140 6032 1565 156 154 96 chr15 19992606 19993150 -81387371 + LTR12 LTR ERV1 1 576 -138 348 215 25 0 chr15 19993150 19993229 -81387292 - L1PB3 LINE L1 -114 6040 5960 754 127 32 0 chr15 19993381 19993507 -81387014 - L1PB3 LINE L1 -207 5947 5818 1272 300 24 20 chr15 19993740 19994487 -81386034 - L1M4 LINE L1 -3022 3124 2375 305 200 56 11 chr15 19994500 19994590 -81385931 + L1MCa LINE L1 2101 2194 -4232 26 82 0 0 chr15 19994590 19994651 -81385870 + AT_rich Low_complexity Low_complexity 1 61 0 4148 127 40 19 chr15 19994652 19994709 -81385812 - L1PA14 LINE L1 -24 6137 6083 2064 153 80 30 chr15 19994709 19995148 -81385373 - LOR1b LTR ERV1 0 461 1 4148 127 40 19 chr15 19995148 19995841 -81384680 - L1PA14 LINE L1 -78 6083 5371 664 71 36 0 chr15 19995832 19995944 -81384577 - L1P4 LINE L1 -676 5489 5374 * 3742 144 16 21 chr15 19995939 19996797 -81383724 - L1P4 LINE L1 -673 5488 4638 2191 92 7 10 chr15 19996797 19997090 -81383431 + AluY SINE Alu 1 292 -19 3742 144 16 21 chr15 19997090 19997172 -81383349 - L1P4 LINE L1 -1523 4638 4557 379 287 0 29 chr15 19997378 19997514 -81383007 - MLT1E LTR MaLR -461 132 1 398 193 35 35 chr15 19997521 19997635 -81382886 - L1MD3 LINE L1 -285 7710 7597 1864 89 8 4 chr15 19997903 19998184 -81382337 + AluY SINE Alu 35 316 0 2064 133 3 0 chr15 19998284 19998569 -81381952 + AluSx SINE Alu 5 290 -22 580 229 3 129 chr15 19998569 19998787 -81381734 - L1MCa LINE L1 -3390 3036 2867 2280 104 0 3 chr15 19998787 19999085 -81381436 - AluSg SINE Alu -13 297 1 580 229 3 129 chr15 19999085 19999176 -81381345 - L1MCa LINE L1 -3559 2867 2766 2365 95 0 0 chr15 19999187 19999483 -81381038 - AluSx SINE Alu -16 296 1 261 261 95 46 chr15 19999676 19999917 -81380604 - L1 LINE L1 -1127 5019 4767 218 281 0 0 chr15 19999932 19999989 -81380532 - MIR SINE MIR -205 57 1 1690 200 0 7 chr15 20000054 20000354 -81380167 - AluJb SINE Alu -14 298 1 2183 118 3 3 chr15 20000604 20000908 -81379613 + AluSc SINE Alu 1 304 -5 957 228 38 29 chr15 20001008 20001129 -81379392 - L1MCa LINE L1 -3907 2700 2582 531 140 75 9 chr15 20001129 20001236 -81379285 - L1MA3 LINE L1 0 6305 6192 957 228 38 29 chr15 20001236 20001554 -81378967 - L1MCa LINE L1 -4025 2582 2223 1181 183 3 45 chr15 20001560 20001871 -81378650 + L1MCa LINE L1 1921 2218 -4208 2415 86 0 0 chr15 20002232 20002535 -81377986 + AluY SINE Alu 1 303 -8 259 206 55 14 chr15 20002536 20002609 -81377912 - L1MD3 LINE L1 -355 7640 7565 3967 239 61 72 chr15 20002854 20004752 -81375769 - L1MC3 LINE L1 -14 8051 6173 2365 112 3 0 chr15 20004752 20005064 -81375457 - AluSp SINE Alu 0 313 1 3967 239 61 72 chr15 20005064 20005104 -81375417 - L1MC3 LINE L1 -1892 6173 6134 1527 194 3 48 chr15 20005114 20005428 -81375093 + AluJo SINE Alu 1 300 -12 1792 237 65 20 chr15 20005440 20005561 -81374960 - L1MC3 LINE L1 -732 5722 5608 2292 90 3 0 chr15 20005561 20005849 -81374672 - AluSg SINE Alu -17 293 5 1792 237 65 20 chr15 20005849 20006508 -81374013 - L1MC3 LINE L1 -846 5608 4896 1979 260 35 41 chr15 20006521 20007382 -81373139 - L1MC3 LINE L1 -1772 4654 3799 348 246 18 2 chr15 20007383 20007563 -81372958 + MLT1F1 LTR MaLR 349 567 0 838 213 31 39 chr15 20007571 20007778 -81372743 + L1MD3 LINE L1 7731 7937 -58 2140 127 0 25 chr15 20007778 20008094 -81372427 - AluSx SINE Alu -4 308 1 838 213 31 39 chr15 20008094 20008140 -81372381 + L1MD3 LINE L1 7937 7982 -13 230 21 62 21 chr15 20008169 20008217 -81372304 + (CAAAA)n Simple_repeat Simple_repeat 2 51 0 2382 97 0 7 chr15 20008626 20008936 -81371585 - AluSq SINE Alu -5 308 1 1890 164 3 6 chr15 20009259 20009570 -81370951 + AluJo SINE Alu 1 310 -2 2269 154 28 42 chr15 20010844 20011225 -81369296 + MSTA LTR MaLR 1 377 -51 2376 86 7 0 chr15 20011225 20011527 -81368994 - AluSg SINE Alu -6 304 1 2269 154 28 42 chr15 20011527 20011579 -81368942 + MSTA LTR MaLR 377 428 0 2150 122 3 0 chr15 20011837 20012141 -81368380 - AluSx SINE Alu -7 305 1 3805 221 18 18 chr15 20012143 20013029 -81367492 + MER54A LTR ERVL 16 901 0 576 186 16 32 chr15 20015962 20016150 -81364371 - L1MA7 LINE L1 -6 6285 6101 1773 243 46 35 chr15 20016365 20017533 -81362988 - L1MC3 LINE L1 -2994 3432 2255 2135 166 32 12 chr15 20017573 20017984 -81362537 + MSTB1 LTR MaLR 1 419 -13 2459 76 0 0 chr15 20018033 20018336 -81362185 + AluY SINE Alu 1 303 -8 794 215 89 7 chr15 20018336 20018601 -81361920 + L1MCa LINE L1 1935 2221 -4205 433 323 165 25 chr15 20018618 20018903 -81361618 - MLT1E LTR MaLR -268 325 1 601 210 14 0 chr15 20018906 20019049 -81361472 - L1MD3 LINE L1 -281 7714 7570 964 196 11 6 chr15 20019329 20019508 -81361013 + AluJb SINE Alu 130 309 -3 4818 229 86 41 chr15 20019521 20020231 -81360290 - L1MC3 LINE L1 -25 8040 7364 1991 119 14 11 chr15 20020231 20020540 -81359981 - AluSc SINE Alu 0 312 3 4818 229 86 41 chr15 20020540 20021474 -81359047 - L1MC3 LINE L1 -701 7364 6301 2575 58 0 10 chr15 20021474 20021787 -81358734 + AluY SINE Alu 1 310 -1 4818 229 86 41 chr15 20021787 20021964 -81358557 - L1MC3 LINE L1 -1764 6301 6134 1835 254 59 33 chr15 20021965 20022635 -81357886 - L1MC3 LINE L1 -721 5733 5028 1558 194 3 40 chr15 20022635 20022828 -81357693 - AluJo SINE Alu 0 312 134 2219 113 3 0 chr15 20022828 20023128 -81357393 - AluSx SINE Alu -11 301 1 1558 194 3 40 chr15 20023128 20023258 -81357263 - AluJo SINE Alu -178 134 1 1835 254 59 33 chr15 20023258 20023573 -81356948 - L1MC3 LINE L1 -1426 5028 4723 852 299 131 18 chr15 20023577 20024243 -81356278 - L1MC3 LINE L1 -1799 4627 3887 443 187 47 19 chr15 20024327 20024515 -81356006 + MLT1E LTR MaLR 355 593 0 758 220 47 8 chr15 20024523 20024759 -81355762 + L1MD3 LINE L1 7731 7975 -20 2408 85 0 0 chr15 20025133 20025427 -81355094 + AluY SINE Alu 1 294 -17 941 163 69 82 chr15 20025800 20026263 -81354258 + THE1C LTR MaLR 1 375 0 1788 131 64 0 chr15 20026946 20027236 -81353285 + AluSx SINE Alu 1 307 0 1194 175 9 22 chr15 20028129 20028358 -81352163 - L1PA15 LINE L1 0 6165 5940 2429 62 10 10 chr15 20028447 20028755 -81351766 - AluY SINE Alu -3 308 1 505 236 124 42 chr15 20028989 20029248 -81351273 + HsTC2 DNA Tc2 1233 1688 -210 1379 214 45 3 chr15 20029814 20030104 -81350417 - AluJb SINE Alu -10 302 1 2261 78 23 13 chr15 20030181 20030489 -81350032 + AluY SINE Alu 1 311 0 403 329 92 12 chr15 20030815 20031055 -81349466 - L1MEc LINE L1 -6046 350 92 2354 90 10 0 chr15 20031273 20031574 -81348947 + AluSp SINE Alu 1 304 -9 656 217 73 62 chr15 20032622 20032929 -81347592 - L1MC3 LINE L1 -3942 2665 2294 2256 88 0 3 chr15 20032929 20033248 -81347273 - AluSg SINE Alu 0 318 1 656 217 73 62 chr15 20033248 20033343 -81347178 - L1MC3 LINE L1 -4313 2294 2201 * 1418 162 0 29 chr15 20033339 20033647 -81346874 + L1MCa LINE L1 1921 2219 -4207 677 253 115 48 chr15 20033647 20033959 -81346562 - MLT1E LTR MaLR -248 345 13 325 311 121 0 chr15 20033973 20034105 -81346416 - L1MD3 LINE L1 -282 7713 7566 3915 250 77 44 chr15 20034359 20036082 -81344439 - L1MC3 LINE L1 -11 7774 5995 2273 84 3 53 chr15 20036096 20036419 -81344102 - AluSq SINE Alu -6 307 1 2364 172 42 4 chr15 20036522 20037022 -81343499 - L1PA15 LINE L1 -360 5794 5276 198 0 0 0 chr15 20037301 20037323 -81343198 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 555 157 0 0 chr15 20037328 20037411 -81343110 - AluSc SINE Alu -21 288 206 303 75 0 0 chr15 20037411 20037451 -81343070 - Alu SINE Alu -263 40 1 411 113 0 0 chr15 20037460 20037522 -81342999 + (TG)n Simple_repeat Simple_repeat 1 62 0 2136 75 0 4 chr15 20037522 20037803 -81342718 - AluY SINE Alu -31 280 1 2363 74 0 0 chr15 20038073 20038371 -81342150 - AluY SINE Alu -13 298 1 390 234 73 92 chr15 20038558 20038776 -81341745 - L1MCa LINE L1 -3759 2667 2454 302 78 0 59 chr15 20038780 20038831 -81341690 - MER75 DNA T2_type -4 500 453 651 202 52 19 chr15 20038853 20039066 -81341455 - L1MCa LINE L1 -3969 2457 2238 781 211 40 46 chr15 20039072 20039376 -81341145 + L1MCa LINE L1 1918 2219 -4207 337 136 11 80 chr15 20039376 20039464 -81341057 - MLT1F1 LTR MaLR -233 334 253 309 284 55 37 chr15 20039552 20039661 -81340860 - MLT1F1 LTR MaLR -482 111 1 497 230 6 67 chr15 20039665 20039830 -81340691 - L1MD3 LINE L1 -282 7713 7559 3094 260 96 47 chr15 20040042 20041687 -81338834 - L1MC3 LINE L1 -6 7779 6033 1600 209 3 0 chr15 20041687 20041983 -81338538 - AluSx SINE Alu -15 297 1 3094 260 96 47 chr15 20041983 20042173 -81338348 - L1MC3 LINE L1 -1752 6033 5854 994 257 62 30 chr15 20042173 20042363 -81338158 - L1MC3 LINE L1 -720 5454 5272 2208 110 0 10 chr15 20042363 20042671 -81337850 + AluSc SINE Alu 4 308 -1 994 257 62 30 chr15 20042671 20043126 -81337395 - L1MC3 LINE L1 -902 5272 4781 * 1379 237 36 14 chr15 20043123 20043629 -81336892 - L1MC3 LINE L1 -2111 4035 3519 260 281 24 0 chr15 20043631 20043713 -81336808 + MLT1E LTR MaLR 350 433 -160 900 190 79 8 chr15 20043817 20044070 -81336451 + L1MD3 LINE L1 7724 7994 -1 2318 81 3 10 chr15 20044409 20044707 -81335814 + AluSc SINE Alu 1 296 -13 1013 270 61 10 chr15 20044921 20045317 -81335204 - L1MC3 LINE L1 -1504 6281 5866 808 228 58 83 chr15 20045387 20045826 -81334695 - MER66A LTR ERV1 -3 475 97 2008 262 66 32 chr15 20045926 20046557 -81333964 - L1MC3 LINE L1 -748 5398 4707 2004 119 13 50 chr15 20046557 20046875 -81333646 - AluSx SINE Alu -6 306 1 2008 262 66 32 chr15 20046875 20047419 -81333102 - L1MC3 LINE L1 -1439 4707 4183 2439 79 0 13 chr15 20047444 20047759 -81332762 - AluY SINE Alu 0 311 1 656 251 55 34 chr15 20047767 20048150 -81332371 - L1MC3 LINE L1 -2190 3956 3566 371 241 131 8 chr15 20048192 20048378 -81332143 + MLT1E LTR MaLR 418 593 0 467 258 38 22 chr15 20048380 20048647 -81331874 + L1MD3 LINE L1 7724 7994 -1 2196 108 0 10 chr15 20049554 20049849 -81330672 - AluY SINE Alu -15 296 5 1398 207 0 39 chr15 20049865 20050170 -81330351 - AluJo SINE Alu -19 293 1 606 265 35 5 chr15 20050172 20050372 -81330149 - L1MC3 LINE L1 -506 7279 7074 1449 291 39 39 chr15 20050386 20050659 -81329862 - L1M4 LINE L1 -1458 4688 4416 1750 118 0 8 chr15 20050659 20050904 -81329617 - AluSg SINE Alu -19 291 49 1449 291 39 39 chr15 20050904 20050999 -81329522 - L1M4 LINE L1 -1730 4416 4322 1684 157 78 28 chr15 20050999 20051356 -81329165 - THE1C LTR MaLR 0 375 1 1449 291 39 39 chr15 20051356 20052155 -81328366 - L1M4 LINE L1 -1823 4323 3520 373 249 296 6 chr15 20052163 20052332 -81328189 + MLT1E LTR MaLR 376 593 0 755 212 45 12 chr15 20052340 20052585 -81327936 + L1MD3 LINE L1 7731 7983 -12 1779 84 88 29 chr15 20052726 20052999 -81327522 - AluSg SINE Alu -21 289 1 687 239 7 0 chr15 20053232 20053421 -81327100 + FAM SINE Alu 1 56 0 1503 255 39 37 chr15 20053628 20054138 -81326383 + MER54A LTR ERVL 19 529 -372 185 160 0 20 chr15 20054184 20054234 -81326287 + (TAGA)n Simple_repeat Simple_repeat 3 51 0 1100 266 34 87 chr15 20054264 20054332 -81326189 - MLT2B3 LTR ERVL -54 500 430 2206 92 4 0 chr15 20054332 20054635 -81325886 - AluY SINE Alu 0 304 1 1100 266 34 87 chr15 20054635 20055092 -81325429 - MLT2B3 LTR ERVL -124 430 2 2475 201 54 2 chr15 20055095 20055673 -81324848 - ERVL-B3 LTR ERVL -20 5744 5137 1508 230 34 37 chr15 20055675 20056084 -81324437 - MSTC LTR MaLR 0 428 21 403 231 66 8 chr15 20056088 20056209 -81324312 - MSTC-int LTR MaLR -1 1734 1607 2419 230 8 69 chr15 20056271 20056998 -81323523 - LTR8 LTR ERV1 -8 683 1 962 258 39 13 chr15 20057001 20057307 -81323214 - HUERS-P1 LTR ERV1 -4 6259 5946 861 252 71 17 chr15 20057412 20057706 -81322815 - PRIMA41-int LTR ERV1 -105 6226 5917 5642 159 51 117 chr15 20057743 20058751 -81321770 - PRIMA41-int LTR ERV1 -299 5422 4350 1950 115 7 17 chr15 20058751 20059038 -81321483 - AluSc SINE Alu -25 284 1 5642 159 51 117 chr15 20059038 20059317 -81321204 - PRIMA41-int LTR ERV1 -1371 4350 4054 1488 180 29 67 chr15 20059317 20059492 -81321029 - AluJb SINE Alu -5 307 148 2213 112 0 3 chr15 20059492 20059786 -81320735 - AluSp SINE Alu -14 299 7 1488 180 29 67 chr15 20059786 20059926 -81320595 - AluJb SINE Alu -164 148 4 5642 159 51 117 chr15 20059926 20060561 -81319960 - PRIMA41-int LTR ERV1 -1667 4054 3729 765 195 124 28 chr15 20060575 20060857 -81319664 - LTR15 LTR ERV1 -18 475 167 3289 197 64 33 chr15 20061045 20061296 -81319225 - PRIMA41-int LTR ERV1 -1588 3292 3050 2389 86 23 0 chr15 20061296 20061598 -81318923 + AluY SINE Alu 1 309 -2 3289 197 64 33 chr15 20061598 20062358 -81318163 - PRIMA41-int LTR ERV1 -1830 3050 1210 1499 237 91 45 chr15 20062383 20062901 -81317620 - PRIMA41-int LTR ERV1 -5442 2095 366 1434 215 75 70 chr15 20062902 20063459 -81317062 - PRIMA41-int LTR ERV1 -5242 1021 462 575 288 0 12 chr15 20063613 20063776 -81316745 - PRIMA41-int LTR ERV1 -6062 201 41 1892 234 11 104 chr15 20063801 20064563 -81315958 - LTR8 LTR ERV1 0 691 1 2102 275 78 64 chr15 20064565 20065537 -81314984 - MSTC-int LTR MaLR -210 1441 449 372 22 0 0 chr15 20065537 20065582 -81314939 + (TG)n Simple_repeat Simple_repeat 2 46 0 2102 275 78 64 chr15 20065582 20065759 -81314762 - MSTC-int LTR MaLR -1202 449 276 7567 21 15 0 chr15 20065763 20066775 -81313746 - L1PA3 LINE L1 0 6155 5136 2620 19 0 0 chr15 20066775 20067097 -81313424 + L1PA3 LINE L1 4817 5138 -1008 709 250 123 35 chr15 20067090 20067146 -81313375 - MSTC-int LTR MaLR -1390 345 295 * 3748 122 80 5 chr15 20067146 20067745 -81312776 - LTR9B LTR ERV1 0 644 1 709 250 123 35 chr15 20067745 20068004 -81312517 - MSTC-int LTR MaLR -1440 295 2 763 193 9 71 chr15 20068006 20068216 -81312305 - MSTC LTR MaLR 0 428 232 1457 182 60 54 chr15 20068216 20068567 -81311954 - LTR10B LTR ERV1 0 547 195 892 179 49 27 chr15 20068691 20068914 -81311607 - MSTC LTR MaLR -193 235 8 775 164 42 12 chr15 20068919 20069084 -81311437 - ERVL-B3 LTR ERVL -624 5140 4971 * 6373 231 22 20 chr15 20069080 20070644 -81309877 - ERVL-B3 LTR ERVL -946 4818 3252 275 353 0 0 chr15 20071540 20071676 -81308845 - PRIMA41-int LTR ERV1 -499 4455 4320 467 339 14 42 chr15 20073438 20073660 -81306861 - PRIMA41-int LTR ERV1 -1990 5766 5539 1963 131 14 0 chr15 20073660 20073950 -81306571 - AluSg SINE Alu -16 294 1 2356 98 0 19 chr15 20073955 20074262 -81306259 - AluSg SINE Alu -9 301 1 467 339 14 42 chr15 20074262 20074464 -81306057 - PRIMA41-int LTR ERV1 -2221 5535 5348 10283 236 55 8 chr15 20075000 20077712 -81302809 - ERVL-B3 LTR ERVL -2905 2859 20 1924 239 35 44 chr15 20077744 20078153 -81302368 - MLT2B3 LTR ERVL -12 542 138 4086 163 23 40 chr15 20078153 20078423 -81302098 - LTR39 LTR ERV1 0 783 510 2233 121 0 0 chr15 20078423 20078729 -81301792 - AluSg SINE Alu -4 306 1 4086 163 23 40 chr15 20078729 20079255 -81301266 - LTR39 LTR ERV1 -273 510 1 1924 239 35 44 chr15 20079255 20079392 -81301129 - MLT2B3 LTR ERVL -416 138 1 1256 264 39 6 chr15 20079392 20079756 -81300765 + MER54A LTR ERVL 522 897 -4 278 343 86 0 chr15 20079946 20080086 -81300435 + HsTC2 DNA Tc2 2 153 -1745 296 264 187 25 chr15 20080175 20080304 -81300217 + HsTC2 DNA Tc2 1508 1615 -283 2051 123 33 41 chr15 20080304 20080669 -81299852 - THE1B LTR MaLR -2 362 1 296 264 187 25 chr15 20080669 20080854 -81299667 + HsTC2 DNA Tc2 1615 1873 -25 801 204 96 119 chr15 20080925 20081396 -81299125 - MER4C LTR ERV1 0 465 6 6241 169 50 43 chr15 20081397 20083238 -81297283 - MER4C-int LTR ERV1 -8 6590 4290 6999 30 1 1 chr15 20083242 20084115 -81296406 - L1PA4 LINE L1 -5 6150 5278 5660 40 0 0 chr15 20084115 20084835 -81295686 + L1P LINE L1 4309 5028 -1118 1091 145 52 76 chr15 20084835 20085124 -81295397 - LOR1-int LTR ERV1 -3404 4716 4435 647 168 0 0 chr15 20085127 20085228 -81295293 + AluJ/FLAM SINE Alu 1 101 -211 2273 141 71 2 chr15 20085229 20085625 -81294896 - LOR1-int LTR ERV1 -1415 5676 5254 2206 59 33 52 chr15 20087132 20087439 -81293082 - AluY SINE Alu -10 301 1 182 226 81 16 chr15 20088180 20088242 -81292279 + MER5B DNA MER1_type 113 178 0 2070 138 6 13 chr15 20089640 20089952 -81290569 + AluSx SINE Alu 1 310 -2 2524 28 0 0 chr15 20091356 20091640 -81288881 - L1PA3 LINE L1 -413 5742 5459 3703 31 12 0 chr15 20091640 20092052 -81288469 + L1PA3 LINE L1 5738 6155 0 1185 234 12 8 chr15 20092060 20092308 -81288213 - AluJo SINE Alu -30 282 34 621 207 5 113 chr15 20092571 20092784 -81287737 - LOR1-int LTR ERV1 -4145 3975 3786 329 273 45 45 chr15 20092916 20093048 -81287473 - LOR1-int LTR ERV1 -3492 4628 4497 * 541 196 129 57 chr15 20093042 20093322 -81287199 - LOR1-int LTR ERV1 -2568 4030 3731 1546 154 24 14 chr15 20093411 20094571 -81285950 + L1P LINE L1 2843 4164 -1982 744 239 22 39 chr15 20094644 20094689 -81285832 - MLT2B3 LTR ERVL 0 554 510 258 116 0 0 chr15 20094689 20094732 -81285789 + (TAGG)n Simple_repeat Simple_repeat 1 43 0 744 239 22 39 chr15 20094732 20094916 -81285605 - MLT2B3 LTR ERVL -44 510 329 556 317 53 41 chr15 20094985 20095379 -81285142 - L1MC3 LINE L1 -925 6860 6462 604 173 9 0 chr15 20095417 20095527 -81284994 - Tigger4(Zombi) DNA MER2_type 0 2731 2621 1228 177 80 121 chr15 20095528 20095940 -81284581 - MER83 LTR ERV1 -7 441 47 385 90 45 30 chr15 20095937 20096004 -81284517 - MER83 LTR ERV1 -344 104 37 * 2214 170 19 0 chr15 20096009 20096368 -81284153 - MER83-int LTR ERV1 -44 4241 3876 2131 133 57 17 chr15 20096345 20096699 -81283822 - MER83-int LTR ERV1 -1244 3041 2674 * 434 167 0 13 chr15 20096711 20096789 -81283732 - MER83-int LTR ERV1 -258 6073 5997 5640 177 84 26 chr15 20096889 20098309 -81282212 - MER83-int LTR ERV1 -523 5423 4059 4123 151 78 30 chr15 20098284 20098965 -81281556 - MER83-int LTR ERV1 -1802 3078 2350 * 2225 100 0 7 chr15 20098965 20099266 -81281255 - AluY SINE Alu -12 299 1 4123 151 78 30 chr15 20099266 20099397 -81281124 - MER83-int LTR ERV1 -2530 2350 2227 2621 168 58 33 chr15 20099395 20100302 -81280219 - MER83-int LTR ERV1 -193 1932 1075 * 3725 179 63 35 chr15 20100320 20101364 -81279157 - MER83-int LTR ERV1 -3725 1155 9 1293 164 82 108 chr15 20101375 20101753 -81278768 - MER83 LTR ERV1 -27 421 54 498 183 10 10 chr15 20101759 20101863 -81278658 - MER83 LTR ERV1 -344 104 1 34 0 0 0 chr15 20101887 20101921 -81278600 + AT_rich Low_complexity Low_complexity 1 34 0 237 83 0 0 chr15 20101923 20101959 -81278562 - HY3 scRNA scRNA -1 100 65 795 146 44 0 chr15 20101959 20102096 -81278425 - Tigger4(Zombi) DNA MER2_type -134 2597 2455 2238 99 7 0 chr15 20102111 20102415 -81278106 - AluSq SINE Alu -7 306 1 3188 187 134 8 chr15 20102415 20103168 -81277353 + Tigger3(Golem) DNA MER2_type 2182 3029 0 2014 131 67 25 chr15 20103178 20103538 -81276983 - MER51B LTR ERV1 -2 375 1 659 207 25 0 chr15 20103539 20103660 -81276861 - MER51B-int LTR ERV1 0 7816 7693 417 229 11 78 chr15 20103883 20104062 -81276459 - MER51B-int LTR ERV1 -6987 829 663 325 176 141 12 chr15 20104139 20104224 -81276297 - MER51B-int LTR ERV1 -3047 2539 2444 * 1680 195 56 125 chr15 20104223 20104817 -81275704 - MER51B-int LTR ERV1 -7263 553 1 1551 155 88 36 chr15 20104817 20105217 -81275304 - MER51B LTR ERV1 0 377 1 880 174 64 0 chr15 20105222 20105394 -81275127 - Tigger4(Zombi) DNA MER2_type -485 2246 2064 1226 270 55 42 chr15 20105427 20105676 -81274845 - L1MC3 LINE L1 -1375 6410 6166 2299 85 0 0 chr15 20105676 20106004 -81274517 - AluY SINE Alu 0 328 1 1226 270 55 42 chr15 20106004 20106297 -81274224 - L1MC3 LINE L1 -1619 6166 5860 708 210 51 56 chr15 20106311 20106748 -81273773 - L1M4 LINE L1 -734 5444 5003 4305 137 56 19 chr15 20106783 20107955 -81272566 + L1PA11 LINE L1 4824 6045 -129 6346 181 20 4 chr15 20107957 20109093 -81271428 + PRIMA41-int LTR ERV1 2740 3893 -3863 2172 108 7 3 chr15 20109184 20109480 -81271041 + AluY SINE Alu 1 297 -14 1252 268 93 80 chr15 20110368 20111130 -81269391 - LTR38B-int LTR ERV1 -971 815 44 938 242 52 121 chr15 20111136 20111632 -81268889 - LTR38B LTR ERV1 -55 555 94 725 136 20 8 chr15 20111641 20111778 -81268743 + L1PA11 LINE L1 6008 6150 -22 349 213 33 17 chr15 20111828 20111999 -81268522 - MLT1E LTR MaLR -15 578 346 1645 270 57 21 chr15 20112048 20112810 -81267711 + L1MC3 LINE L1 4625 5413 -749 1233 224 139 33 chr15 20112879 20113311 -81267210 + MER66A LTR ERV1 96 475 -3 807 223 64 16 chr15 20113358 20113609 -81266912 + L1MC3 LINE L1 5854 6116 -1669 588 15 0 0 chr15 20113613 20113680 -81266841 + L1PA3 LINE L1 6086 6152 -3 1455 246 87 56 chr15 20113728 20114426 -81266095 + L1MC3 LINE L1 6637 7356 -429 2143 130 0 0 chr15 20114445 20114744 -81265777 + AluSx SINE Alu 1 299 -13 429 191 34 177 chr15 20114777 20114905 -81265616 + L1MC3 LINE L1 5200 5269 -915 1232 212 42 46 chr15 20114905 20115188 -81265333 + AluJo SINE Alu 1 282 -30 429 191 34 177 chr15 20115188 20115360 -81265161 + L1MC3 LINE L1 5269 5464 -720 2204 100 0 3 chr15 20115380 20115669 -81264852 - AluY SINE Alu -23 288 1 1347 230 74 14 chr15 20115669 20116086 -81264435 + L1MC3 LINE L1 5858 6299 -1486 8929 98 7 3 chr15 20116237 20117476 -81263045 + L1P LINE L1 2 1245 -4901 609 277 124 0 chr15 20119242 20119516 -81261005 - L2 LINE L2 -2412 902 595 2237 168 31 120 chr15 20119565 20120180 -81260341 - MER7C DNA MER2_type -42 560 1 332 276 156 33 chr15 20120183 20120458 -81260063 - L2 LINE L2 -2793 521 213 3461 141 55 35 chr15 20120827 20121485 -81259036 - LTR1 LTR ERV1 -81 704 34 610 105 29 48 chr15 20121578 20121683 -81258838 - MER41-int LTR ERV1 -1229 4717 4615 2575 53 3 22 chr15 20121683 20122002 -81258519 - L1PA5 LINE L1 0 6154 5842 2107 254 103 35 chr15 20122102 20123261 -81257260 + L1M4 LINE L1 2585 3823 -2323 503 264 70 82 chr15 20125851 20126507 -81254014 + HSREP522 Satellite telomeric 1 648 -179 1455 186 53 82 chr15 20126656 20126944 -81253577 - MLT1A1 LTR MaLR 0 365 87 2174 117 3 0 chr15 20126944 20127273 -81253248 - AluSg SINE Alu 0 330 1 1455 186 53 82 chr15 20127273 20127358 -81253163 - MLT1A1 LTR MaLR -278 87 1 195 114 0 0 chr15 20128736 20128771 -81251750 + (CATA)n Simple_repeat Simple_repeat 2 36 0 1895 122 0 25 chr15 20128798 20129084 -81251437 - AluSq SINE Alu -24 289 11 2073 111 17 10 chr15 20129199 20129497 -81251024 - AluSq SINE Alu -13 300 1 930 148 7 0 chr15 20129498 20129640 -81250881 - AluY SINE Alu -168 143 1 1135 172 128 35 chr15 20130648 20130938 -81249583 - SST1 Satellite centromeric 0 1563 1247 772 154 16 0 chr15 20130975 20131098 -81249423 + AluSg/x SINE Alu 157 281 -31 233 118 0 0 chr15 20131209 20131243 -81249278 + (A)n Simple_repeat Simple_repeat 1 34 0 7240 158 24 17 chr15 20131329 20132715 -81247806 - SST1 Satellite centromeric -167 1396 1 1327 294 60 48 chr15 20133393 20134211 -81246310 - SST1 Satellite centromeric -471 1092 261 357 102 0 0 chr15 20134211 20134270 -81246251 + (CCCCAG)n Simple_repeat Simple_repeat 5 63 0 1327 294 60 48 chr15 20134270 20134314 -81246207 - SST1 Satellite centromeric -1302 261 219 215 315 198 0 chr15 20134600 20134711 -81245810 + MER5A DNA MER1_type 55 187 -2 379 273 23 23 chr15 20134787 20134919 -81245602 + L2 LINE L2 2927 3058 -214 291 298 22 10 chr15 20135259 20135378 -81245143 + MIR SINE MIR 33 152 -65 25 31 0 0 chr15 20136472 20136504 -81244017 + AT_rich Low_complexity Low_complexity 1 32 0 306 267 165 81 chr15 20136833 20137069 -81243452 - MLT1L LTR MaLR -225 390 135 499 273 31 0 chr15 20137221 20137349 -81243172 - L2 LINE L2 -2 3311 3180 495 256 81 24 chr15 20137496 20137663 -81242858 - L1ME LINE L1 -324 5797 5614 661 238 0 0 chr15 20137663 20137789 -81242732 + FLAM_A SINE Alu 1 126 -7 495 256 81 24 chr15 20137789 20137832 -81242689 - L1ME LINE L1 -507 5614 5575 294 281 0 0 chr15 20137841 20138005 -81242516 + (CAT)n Simple_repeat Simple_repeat 1 164 0 * 582 123 8 75 chr15 20137891 20138221 -81242300 + (CACCAT)n Simple_repeat Simple_repeat 1 307 0 218 294 0 0 chr15 20139641 20139709 -81240812 + (CA)n Simple_repeat Simple_repeat 2 69 0 2130 104 10 10 chr15 20141193 20141501 -81239020 - AluY SINE Alu -3 308 1 217 281 94 62 chr15 20141767 20141895 -81238626 - MIR SINE MIR -19 243 112 589 253 103 19 chr15 20142027 20142339 -81238182 + L1MEd LINE L1 902 1239 -4880 398 297 86 51 chr15 20142359 20142756 -81237765 + L1MEd LINE L1 1254 1734 -4440 413 260 54 84 chr15 20143095 20143464 -81237057 - L1M4 LINE L1 -2260 3886 3529 267 161 58 46 chr15 20143575 20143662 -81236859 + MLT1E LTR MaLR 495 582 -11 718 220 42 15 chr15 20143669 20143928 -81236593 + L1MD3 LINE L1 7721 7986 -9 1890 14 5 0 chr15 20145275 20145494 -81235027 - L1PA3 LINE L1 -4 6151 5932 337 300 25 25 chr15 20146773 20146893 -81233628 + HsTC2 DNA Tc2 35 154 -1744 330 242 173 81 chr15 20146890 20147009 -81233512 + HsTC2 DNA Tc2 1233 1340 -558 * 2040 144 0 25 chr15 20147009 20147329 -81233192 + AluSx SINE Alu 1 312 0 330 242 173 81 chr15 20147329 20147544 -81232977 + HsTC2 DNA Tc2 1340 1774 -124 257 257 27 14 chr15 20147719 20147793 -81232728 - MIR SINE MIR -48 214 140 21 0 0 0 chr15 20148001 20148022 -81232499 + AT_rich Low_complexity Low_complexity 1 21 0 303 28 0 0 chr15 20148168 20148204 -81232317 + (TA)n Simple_repeat Simple_repeat 2 37 0 1051 128 14 0 chr15 20148239 20148387 -81232134 - AluSx SINE Alu -149 163 14 519 267 74 27 chr15 20148496 20148792 -81231729 + HsTC2 DNA Tc2 1233 1718 -180 457 129 0 0 chr15 20148817 20148887 -81231634 + Alu SINE Alu 234 303 -9 896 208 113 14 chr15 20148900 20149193 -81231328 - L1MC3 LINE L1 -25 7760 7439 2082 196 39 4 chr15 20149231 20149989 -81230532 - L1P5 LINE L1 -606 5548 4767 271 269 47 35 chr15 20150726 20150897 -81229624 - L1PA15-16 LINE L1 -6436 413 241 31282 44 4 3 chr15 20151120 20156019 -81224502 + L1PA4 LINE L1 1259 6155 0 1803 235 120 79 chr15 20156143 20157397 -81223124 + L1MC3 LINE L1 6474 7779 -6 259 313 20 20 chr15 20157874 20158021 -81222500 + L1MC3 LINE L1 92 238 -6158 290 206 110 14 chr15 20158283 20158356 -81222165 - MLT1E LTR MaLR -159 434 355 1015 284 38 42 chr15 20158373 20158975 -81221546 + L1MC3 LINE L1 3597 4196 -2019 1268 272 68 21 chr15 20159013 20159901 -81220620 + L1MC3 LINE L1 4602 5523 -730 956 258 126 17 chr15 20159901 20160424 -81220097 + L1MC3 LINE L1 5923 6502 -1352 435 261 74 102 chr15 20160458 20161055 -81219466 + L1MC3 LINE L1 6668 7195 -659 347 325 64 29 chr15 20161066 20161411 -81219110 + L1PA15-16 LINE L1 2 358 -6491 3348 214 14 27 chr15 20161679 20162604 -81217917 - LTR57-int LTR ERVL -3822 1521 609 1402 194 33 23 chr15 20162528 20163061 -81217460 - LTR38B-int LTR ERV1 -2351 1934 1341 * 411 319 59 28 chr15 20163395 20163649 -81216872 - LTR38B-int LTR ERV1 -1412 374 113 479 262 87 42 chr15 20163713 20164231 -81216290 - LTR38B LTR ERV1 0 611 64 394 299 109 0 chr15 20164916 20165100 -81215421 - L1MEc LINE L1 -6078 318 115 601 180 44 16 chr15 20165593 20165776 -81214745 - L1MCa LINE L1 -3996 2430 2243 295 132 0 0 chr15 20165792 20165860 -81214661 + L1MCa LINE L1 1921 1988 -4438 447 224 39 75 chr15 20165881 20165901 -81214620 + L1MCa LINE L1 1974 1993 -4433 1975 130 3 23 chr15 20165901 20166201 -81214320 + AluSx SINE Alu 2 295 -17 447 224 39 75 chr15 20166201 20166435 -81214086 + L1MCa LINE L1 1993 2219 -4207 282 291 97 24 chr15 20166497 20166662 -81213859 - MLT1E LTR MaLR -333 260 84 239 229 220 18 chr15 20166746 20166855 -81213666 - L1MC4 LINE L1 -421 7621 7491 21 0 0 0 chr15 20166986 20167007 -81213514 + AT_rich Low_complexity Low_complexity 1 21 0 39 0 0 0 chr15 20167100 20167139 -81213382 + AT_rich Low_complexity Low_complexity 1 39 0 968 205 111 3 chr15 20167140 20167428 -81213093 - L1MC3 LINE L1 -19 7766 7448 962 258 18 40 chr15 20167434 20167564 -81212957 - L1MC3 LINE L1 -384 7401 7270 1885 151 6 26 chr15 20167564 20167876 -81212645 - AluJo SINE Alu -6 306 1 962 258 18 40 chr15 20167876 20168071 -81212450 - L1MC3 LINE L1 -515 7270 7083 1285 285 66 46 chr15 20168089 20168965 -81211556 - L1M4 LINE L1 -1453 4693 3787 180 0 0 0 chr15 20168965 20168985 -81211536 + (TAAA)n Simple_repeat Simple_repeat 4 23 0 1285 285 66 46 chr15 20168985 20169259 -81211262 - L1M4 LINE L1 -2359 3787 3520 395 208 52 7 chr15 20169300 20169435 -81211086 + MLT1E LTR MaLR 422 593 0 667 256 24 12 chr15 20169442 20169692 -81210829 + L1MD3 LINE L1 7731 7983 -12 22 0 0 0 chr15 20169782 20169804 -81210717 + AT_rich Low_complexity Low_complexity 1 22 0 349 269 15 15 chr15 20170052 20170182 -81210339 + L1ME1 LINE L1 6011 6140 -26 610 242 6 38 chr15 20170249 20170406 -81210115 + FAM SINE Alu 3 154 -31 471 35 0 0 chr15 20170408 20170465 -81210056 + (TAAA)n Simple_repeat Simple_repeat 3 59 0 2356 77 0 3 chr15 20170522 20170820 -81209701 - AluY SINE Alu -14 297 1 1840 244 32 25 chr15 20170946 20171471 -81209050 + MER54A LTR ERVL 1 529 -372 249 139 0 0 chr15 20171509 20171552 -81208969 + (TAGA)n Simple_repeat Simple_repeat 2 44 0 1626 230 28 83 chr15 20171560 20172125 -81208396 - MLT2B3 LTR ERVL -20 534 1 2603 209 16 5 chr15 20172125 20172736 -81207785 - ERVL-B3 LTR ERVL -7 5757 5140 1770 214 33 33 chr15 20172739 20173165 -81207356 - MSTC LTR MaLR 0 428 3 2343 231 20 52 chr15 20173352 20174041 -81206480 - LTR8 LTR ERV1 -9 682 16 1148 261 19 13 chr15 20174077 20174388 -81206133 - HUERS-P1 LTR ERV1 -5 6258 5946 6845 189 65 74 chr15 20174493 20175744 -81204777 - MER41-int LTR ERV1 -105 6226 4965 2361 77 7 3 chr15 20175744 20176054 -81204467 + AluY SINE Alu 1 311 0 6845 189 65 74 chr15 20176054 20176407 -81204114 - MER41-int LTR ERV1 -1366 4965 4610 1548 193 18 11 chr15 20176407 20176692 -81203829 - AluJo SINE Alu -23 289 3 6845 189 65 74 chr15 20176692 20178598 -81201923 - MER41-int LTR ERV1 -1721 4610 1816 1064 235 89 89 chr15 20178658 20179151 -81201370 - MER41-int LTR ERV1 -4114 3423 2931 2554 223 33 27 chr15 20179166 20180020 -81200501 - MER41-int LTR ERV1 -2594 2286 1280 894 218 66 9 chr15 20180020 20180361 -81200160 - LTR8 LTR ERV1 -364 363 1 899 284 61 78 chr15 20180361 20180892 -81199629 - MSTC-int LTR MaLR -221 1430 923 413 155 0 0 chr15 20180906 20180990 -81199531 + MSTC LTR MaLR 345 428 0 460 222 5 123 chr15 20180990 20181193 -81199328 + MSTC-int LTR MaLR 1 179 -1472 3012 217 11 10 chr15 20181195 20181896 -81198625 - ERVL-B3 LTR ERVL -1001 4763 4062 3216 265 82 12 chr15 20182102 20183321 -81197200 - ERVL-B3 LTR ERVL -4369 1285 10 1738 226 49 55 chr15 20183340 20183752 -81196769 - MLT2B3 LTR ERVL -8 546 136 4177 179 21 8 chr15 20183752 20184525 -81195996 - LTR39 LTR ERV1 0 783 1 1738 226 49 55 chr15 20184525 20184661 -81195860 - MLT2B3 LTR ERVL -418 136 1 1159 249 49 12 chr15 20184676 20185022 -81195499 + MER54A LTR ERVL 538 896 -5 395 273 106 48 chr15 20185350 20185677 -81194844 + HsTC2 DNA Tc2 1236 1543 -355 4766 51 10 0 chr15 20185677 20186262 -81194259 + LTR10C LTR ERV1 1 591 0 395 273 106 48 chr15 20186262 20186372 -81194149 + HsTC2 DNA Tc2 1543 1874 -24 545 215 81 6 chr15 20186452 20186624 -81193897 - MER4C LTR ERV1 -1 464 280 388 223 58 6 chr15 20186683 20186906 -81193615 - MER4C LTR ERV1 -196 269 6 6950 180 49 58 chr15 20186907 20189059 -81191462 - LTR38-int LTR ERV1 -8 6590 4088 1593 196 7 17 chr15 20189059 20189360 -81191161 + AluJb SINE Alu 1 298 -14 6950 180 49 58 chr15 20189360 20189866 -81190655 - LTR38-int LTR ERV1 -2510 4088 3579 1586 206 61 80 chr15 20189871 20189902 -81190619 - LTR38-int LTR ERV1 -1863 3017 2987 1548 211 0 20 chr15 20189902 20190196 -81190325 - AluJo SINE Alu -18 294 7 1586 206 61 80 chr15 20190196 20190752 -81189769 - LTR38-int LTR ERV1 -1893 2987 2441 401 122 27 0 chr15 20190754 20190828 -81189693 - L1PA15 LINE L1 -16 6149 6074 341 204 122 10 chr15 20190959 20191057 -81189464 - LTR38-int LTR ERV1 -5232 1099 991 329 55 14 0 chr15 20191062 20191108 -81189413 - LTR38-int LTR ERV1 -4793 1153 150 481 212 36 15 chr15 20191286 20191423 -81189098 - LTR38-int LTR ERV1 -6346 252 113 1163 202 72 118 chr15 20191518 20192003 -81188518 - MER4C LTR ERV1 0 465 3 236 257 87 22 chr15 20192257 20192440 -81188081 - L1M4 LINE L1 -1079 5067 4873 2016 135 10 19 chr15 20192500 20192686 -81187835 - AluSg SINE Alu -2 308 125 207 0 0 0 chr15 20192686 20192709 -81187812 + (TTTTG)n Simple_repeat Simple_repeat 3 25 0 2016 135 10 19 chr15 20192709 20192833 -81187688 - AluSg SINE Alu -185 125 1 1134 235 78 35 chr15 20193031 20193456 -81187065 + LTR47B LTR ERVL 1 443 0 1958 311 54 60 chr15 20194500 20196236 -81184285 - LTR38-int LTR ERV1 -3414 3708 1983 784 314 17 25 chr15 20196709 20197066 -81183455 - LTR38-int LTR ERV1 -5860 1262 909 355 303 72 60 chr15 20197360 20197611 -81182910 - LTR38-int LTR ERV1 -6387 735 482 276 355 58 0 chr15 20198171 20198292 -81182229 - LTR38-int LTR ERV1 -971 815 688 930 319 28 35 chr15 20198542 20198937 -81181584 - LTR38-int LTR ERV1 -1342 444 53 3710 102 7 48 chr15 20198958 20199567 -81180954 - L1PA13 LINE L1 -186 5977 5394 1167 192 8 0 chr15 20199564 20199798 -81180723 + L1P LINE L1 3265 3500 -2646 * 22 0 0 0 chr15 20199896 20199918 -81180603 + AT_rich Low_complexity Low_complexity 1 22 0 2871 198 64 3 chr15 20200243 20200854 -81179667 + LTR39 LTR ERV1 1 648 -135 1862 148 0 0 chr15 20200854 20201169 -81179352 - AluSq SINE Alu 0 315 1 915 148 113 4 chr15 20201298 20201527 -81178994 - L1MCa LINE L1 -3961 2465 2212 802 200 39 71 chr15 20201534 20201814 -81178707 + L1MCa LINE L1 1939 2209 -4217 863 299 83 25 chr15 20201814 20202138 -81178383 - MLT1E LTR MaLR -250 343 1 421 313 7 7 chr15 20202142 20202292 -81178229 - L1MD3 LINE L1 -282 7713 7564 3573 254 79 45 chr15 20202527 20204003 -81176518 - L1MC3 LINE L1 -6 7779 6254 2109 286 31 18 chr15 20203993 20204871 -81175650 - L1M4 LINE L1 -1722 4424 3536 * 291 304 10 29 chr15 20204871 20204973 -81175548 + MLT1E LTR MaLR 334 433 -160 634 187 44 128 chr15 20205087 20205338 -81175183 + L1MD3 LINE L1 7753 7982 -13 2271 88 3 0 chr15 20206680 20206974 -81173547 + AluY SINE Alu 3 297 -14 1639 231 5 44 chr15 20208086 20208288 -81172233 + MER54A LTR ERVL 1 181 -720 2658 113 10 12 chr15 20208288 20208705 -81171816 - L1PB1 LINE L1 0 6151 5736 1639 231 5 44 chr15 20208705 20208908 -81171613 + MER54A LTR ERVL 181 390 -511 603 197 29 7 chr15 20208952 20209089 -81171432 - L1MD3 LINE L1 -281 7714 7575 1734 182 116 31 chr15 20209327 20209734 -81170787 - L1MC3 LINE L1 -7 7778 7326 1188 177 3 125 chr15 20209734 20210078 -81170443 - AluJb SINE Alu 0 302 1 1734 182 116 31 chr15 20210078 20210127 -81170394 - L1MC3 LINE L1 -459 7326 7283 405 246 34 17 chr15 20210224 20210303 -81170218 - L1MC3 LINE L1 -740 7045 6969 2078 137 0 0 chr15 20210303 20210596 -81169925 - AluSx SINE Alu -19 293 1 405 246 34 17 chr15 20210596 20210691 -81169830 - L1MC3 LINE L1 -816 6969 6868 913 256 40 7 chr15 20210949 20211246 -81169275 + L1MC3 LINE L1 5861 6167 -1618 1223 210 62 74 chr15 20211364 20211764 -81168757 - MER66A LTR ERV1 -3 475 97 3714 269 63 26 chr15 20211894 20213665 -81166856 - L1M4 LINE L1 -744 5402 3567 412 167 43 88 chr15 20213704 20213890 -81166631 + MLT1F1 LTR MaLR 346 567 0 806 231 30 11 chr15 20213892 20214156 -81166365 + L1MD3 LINE L1 7724 7992 -3 349 297 54 0 chr15 20216259 20216396 -81164125 + HsTC2 DNA Tc2 3 154 -1744 * 704 271 31 57 chr15 20216393 20216874 -81163647 + HsTC2 DNA Tc2 1233 1873 -25 355 333 49 27 chr15 20217144 20217369 -81163152 - L1M4 LINE L1 -1034 5112 4883 1273 232 0 20 chr15 20217502 20217808 -81162713 - AluJo SINE Alu -2 300 1 564 222 11 103 chr15 20218887 20219072 -81161449 - LTR36-int LTR ERV1 -4167 3953 3786 1020 209 33 38 chr15 20219160 20219593 -81160928 - LTR36-int LTR ERV1 -2148 4183 3731 5201 180 76 76 chr15 20219631 20221522 -81158999 - LTR36-int LTR ERV1 -2869 3729 682 1514 200 36 17 chr15 20221511 20222040 -81158481 - LTR36-int LTR ERV1 -2351 1934 1341 * 487 321 56 24 chr15 20222372 20222624 -81157897 - LTR36-int LTR ERV1 -1412 374 115 592 268 118 60 chr15 20222690 20223208 -81157313 - LTR36 LTR ERV1 0 611 64 279 0 0 0 chr15 20223345 20223376 -81157145 + (T)n Simple_repeat Simple_repeat 1 31 0 7878 5 0 0 chr15 20223876 20224761 -81155760 + L1HS LINE L1 5271 6155 0 994 136 0 23 chr15 20224767 20224943 -81155578 + L1MC/D LINE L1 5283 5454 -879 328 141 0 31 chr15 20224917 20224981 -81155540 - L1MC1 LINE L1 -127 6206 6145 * 516 288 110 5 chr15 20225520 20225739 -81154782 - L1MEc LINE L1 -6054 342 101 724 177 111 0 chr15 20226222 20226420 -81154101 - L1MCa LINE L1 -3996 2430 2211 559 191 23 159 chr15 20226416 20226527 -81153994 + L1MCa LINE L1 1919 2043 -4383 * 1854 144 0 33 chr15 20226527 20226833 -81153688 + AluSx SINE Alu 1 296 -16 559 191 23 159 chr15 20226833 20227067 -81153454 + L1MCa LINE L1 2043 2217 -4209 487 306 150 20 chr15 20227079 20227373 -81153148 - MLT1E LTR MaLR -259 334 3 240 248 220 18 chr15 20227380 20227489 -81153032 - L1MC4 LINE L1 -421 7621 7491 37 0 0 0 chr15 20227734 20227771 -81152750 + AT_rich Low_complexity Low_complexity 1 37 0 1774 218 132 25 chr15 20227778 20228202 -81152319 - L1MC3 LINE L1 -23 7762 7262 1824 157 10 26 chr15 20228202 20228515 -81152006 - AluJo SINE Alu -4 308 1 1774 218 132 25 chr15 20228515 20228649 -81151872 - L1MC3 LINE L1 -523 7262 7144 1504 281 61 52 chr15 20228689 20229853 -81150668 - L1M4 LINE L1 -1453 4693 3520 453 222 82 0 chr15 20229894 20230029 -81150492 + MLT1F1 LTR MaLR 422 567 0 771 253 24 8 chr15 20230037 20230286 -81150235 + L1MD3 LINE L1 7731 7983 -12 22 0 0 0 chr15 20230376 20230398 -81150123 + AT_rich Low_complexity Low_complexity 1 22 0 619 229 6 38 chr15 20230649 20230806 -81149715 + FAM SINE Alu 3 154 -31 2081 110 7 3 chr15 20230883 20231184 -81149337 - AluY SINE Alu -9 302 1 1926 249 32 25 chr15 20231329 20231854 -81148667 + MER54A LTR ERVL 1 529 -372 248 143 18 0 chr15 20231890 20231946 -81148575 + (TAGA)n Simple_repeat Simple_repeat 2 58 0 1787 245 32 36 chr15 20231965 20232467 -81148054 - MLT2B3 LTR ERVL -54 500 1 2799 208 25 3 chr15 20232467 20233072 -81147449 - ERVL-B3 LTR ERVL -7 5757 5140 1761 199 40 42 chr15 20233075 20233502 -81147019 - MSTC LTR MaLR 0 428 3 2414 236 23 54 chr15 20233690 20234377 -81146144 - LTR8 LTR ERV1 -10 681 16 1211 258 23 13 chr15 20234413 20234723 -81145798 - HUERS-P1 LTR ERV1 -5 6258 5946 961 208 177 14 chr15 20234804 20235098 -81145423 - LTR49-int LTR ERV1 -57 6274 5933 5036 192 50 59 chr15 20235148 20236437 -81144084 - LTR49-int LTR ERV1 -541 5790 4514 1537 207 11 3 chr15 20236437 20236722 -81143799 - AluJo SINE Alu -23 289 3 5036 192 50 59 chr15 20236722 20236874 -81143647 - LTR49-int LTR ERV1 -1817 4514 4362 4097 169 49 43 chr15 20236870 20238030 -81142491 + MER4C-int LTR ERV1 4958 6590 -8 * 1094 182 126 90 chr15 20238031 20238475 -81142046 + MER4C LTR ERV1 6 465 0 470 262 111 40 chr15 20238554 20238664 -81141857 - HsTC2 DNA Tc2 -24 1874 1773 4795 46 10 0 chr15 20238664 20239249 -81141272 - LTR10C LTR ERV1 0 591 1 470 262 111 40 chr15 20239249 20239570 -81140951 - HsTC2 DNA Tc2 -125 1773 1236 1187 228 37 50 chr15 20239897 20240277 -81140244 - MER54A LTR ERVL -4 897 523 446 216 67 15 chr15 20240277 20240411 -81140110 + MLT2B3 LTR ERVL 1 141 -413 2283 148 46 16 chr15 20240412 20240845 -81139676 + LTR39 LTR ERV1 1 446 -337 18581 45 1 2 chr15 20240845 20243306 -81137215 - L1P LINE L1 -2556 3590 1134 616 284 75 17 chr15 20243312 20243777 -81136744 - L1M4 LINE L1 -2001 4145 3654 1449 204 10 60 chr15 20245195 20245509 -81135012 - AluJo SINE Alu -4 298 1 450 263 258 5 chr15 20245513 20245711 -81134810 + MLT1E LTR MaLR 346 593 0 870 197 30 17 chr15 20245738 20245972 -81134549 + L1MD3 LINE L1 7745 7981 -14 815 201 0 0 chr15 20246005 20246149 -81134372 + FRAM SINE Alu 13 156 -20 1551 196 0 18 chr15 20246879 20247160 -81133361 + AluJb SINE Alu 1 276 -36 481 182 0 25 chr15 20247160 20247281 -81133240 + GA-rich Low_complexity Low_complexity 3 120 0 864 203 121 118 chr15 20248533 20248981 -81131540 - LTR47A LTR ERVL -2 450 2 717 239 52 124 chr15 20249142 20249756 -81130765 - LTR38B LTR ERV1 0 610 41 358 260 42 0 chr15 20250219 20250315 -81130206 - PABL_B-int LTR ERV1 -446 6676 6577 268 274 0 0 chr15 20250258 20250331 -81130190 - HERVL18 LTR ERVL -300 5747 5675 * 861 296 55 26 chr15 20250334 20250828 -81129693 - PABL_B-int LTR ERV1 -589 7167 6660 256 312 9 9 chr15 20251043 20251152 -81129369 - PABL_B-int LTR ERV1 -1309 6447 6339 479 350 13 16 chr15 20251830 20252133 -81128388 - PABL_B-int LTR ERV1 -2913 4209 3908 2298 177 60 11 chr15 20253087 20253945 -81126576 - L1P5 LINE L1 -479 5675 4767 615 303 73 72 chr15 20253956 20255143 -81125378 - L1PA15-16 LINE L1 -5685 1165 1 2129 248 98 55 chr15 20255161 20255672 -81124849 - L1MC3 LINE L1 -659 7195 6708 240 59 0 0 chr15 20255672 20255706 -81124815 + (CA)n Simple_repeat Simple_repeat 1 34 0 2129 248 98 55 chr15 20255706 20256414 -81124107 - L1MC3 LINE L1 -1146 6708 5923 1183 253 40 22 chr15 20256414 20257084 -81123437 - L1MC3 LINE L1 -720 5523 4846 1090 264 35 31 chr15 20257099 20257611 -81122910 - L1MC3 LINE L1 -2105 4110 3597 249 295 13 0 chr15 20257618 20257696 -81122825 + MLT1E LTR MaLR 345 423 -170 358 259 164 9 chr15 20257808 20258028 -81122493 + L1MD3 LINE L1 7733 7986 -9 400 277 130 30 chr15 20259349 20259580 -81120941 - L1MC3 LINE L1 -6051 345 92 386 284 22 0 chr15 20259699 20259833 -81120688 - L1MD3 LINE L1 -288 7707 7571 1079 163 0 0 chr15 20259935 20260095 -81120426 + AluSx SINE Alu 1 160 -152 1080 275 65 2 chr15 20260100 20260565 -81119956 - L1M4 LINE L1 -872 5554 5061 * 1093 254 86 11 chr15 20260563 20261040 -81119481 - L1MCa LINE L1 -2115 4311 3799 343 238 12 0 chr15 20261041 20261121 -81119400 + MLT1E LTR MaLR 349 429 -164 1051 183 53 0 chr15 20261222 20261468 -81119053 + L1MD3 LINE L1 7724 7982 -13 2206 146 25 3 chr15 20262085 20262441 -81118080 - THE1B LTR MaLR 0 364 1 1646 209 6 3 chr15 20264274 20264609 -81115912 + MER54A LTR ERVL 24 359 -542 674 203 14 0 chr15 20264668 20264811 -81115710 - L1MD3 LINE L1 -282 7713 7569 813 221 42 8 chr15 20265041 20265303 -81115218 - L1MC3 LINE L1 -4 7781 7511 292 260 20 20 chr15 20265431 20265531 -81114990 + HERVL18 LTR ERVL 1225 1324 -4723 357 356 24 0 chr15 20266191 20266399 -81114122 + HERVL18 LTR ERVL 1852 2064 -3279 620 360 29 23 chr15 20266494 20266743 -81113778 + HERVL18 LTR ERVL 2312 2558 -2785 1952 169 0 13 chr15 20266743 20267057 -81113464 + AluSx SINE Alu 1 310 -2 620 360 29 23 chr15 20267057 20267496 -81113025 + HERVL18 LTR ERVL 2558 3004 -2339 999 251 34 17 chr15 20267690 20268309 -81112212 - L1MCa LINE L1 -3584 2842 2213 962 207 20 47 chr15 20268315 20268615 -81111906 + L1MCa LINE L1 1925 2216 -4210 386 297 157 13 chr15 20268623 20268852 -81111669 - MLT1E LTR MaLR -253 340 79 639 212 0 20 chr15 20268951 20269102 -81111419 - L1MD3 LINE L1 -283 7712 7565 1522 218 105 4 chr15 20269351 20269810 -81110711 - L1MC3 LINE L1 -6 7779 7275 5936 72 12 1 chr15 20269810 20270624 -81109897 - MER11B LTR ERVK -413 823 1 5978 199 32 56 chr15 20270636 20273343 -81107178 - L1MA1 LINE L1 -17 6285 3654 1403 205 6 75 chr15 20274305 20274627 -81105894 - AluJo SINE Alu -2 300 1 476 253 258 5 chr15 20274631 20274829 -81105692 + MLT1E LTR MaLR 346 593 0 793 225 29 16 chr15 20274856 20275100 -81105421 + L1MD3 LINE L1 7745 7991 -4 794 207 0 0 chr15 20275123 20275268 -81105253 + FRAM SINE Alu 13 157 -19 31 26 0 0 chr15 20275621 20275659 -81104862 + AT_rich Low_complexity Low_complexity 1 38 0 327 283 0 22 chr15 20275858 20275950 -81104571 + L1MC4 LINE L1 6614 6703 -1339 339 300 0 0 chr15 20275952 20276042 -81104479 + L1MC4 LINE L1 6614 6703 -1339 1566 204 19 16 chr15 20276182 20276491 -81104030 + AluJb SINE Alu 3 312 0 254 140 0 20 chr15 20276510 20276560 -81103961 + (GGAA)n Simple_repeat Simple_repeat 4 52 0 966 138 170 167 chr15 20277833 20278281 -81102240 - LTR47A LTR ERVL -2 450 2 895 253 38 112 chr15 20278442 20279101 -81101420 - LTR38B LTR ERV1 0 610 1 1525 306 53 38 chr15 20279298 20280450 -81100071 - LTR38B-int LTR ERV1 -251 7505 6337 1517 328 54 39 chr15 20281111 20282785 -81097736 - PABL_B-int LTR ERV1 -2913 4209 2511 277 273 45 0 chr15 20283000 20283088 -81097433 - PABL_B-int LTR ERV1 -4824 2298 2207 365 209 33 22 chr15 20283218 20283309 -81097212 - PABL_B-int LTR ERV1 -5045 2077 1986 627 325 18 24 chr15 20283802 20284134 -81096387 - PABL_B-int LTR ERV1 -5861 1261 932 287 339 58 0 chr15 20285321 20285442 -81095079 - PABL_B-int LTR ERV1 -971 815 688 782 304 38 46 chr15 20285693 20286088 -81094433 - PABL_B-int LTR ERV1 -1342 444 53 3516 104 10 45 chr15 20286109 20286714 -81093807 - L1PA13 LINE L1 -186 5977 5394 1105 188 8 0 chr15 20286711 20286945 -81093576 + L1P LINE L1 3265 3500 -2646 * 22 80 0 0 chr15 20287043 20287093 -81093428 + AT_rich Low_complexity Low_complexity 1 50 0 2753 182 66 5 chr15 20287387 20287990 -81092531 + LTR39 LTR ERV1 1 640 -143 1881 148 0 0 chr15 20287998 20288313 -81092208 - AluSq SINE Alu 0 315 1 618 212 7 22 chr15 20288313 20288450 -81092071 - AluJo SINE Alu -177 135 1 1374 90 0 0 chr15 20290172 20290350 -81090171 + AluSx SINE Alu 1 178 -134 299 271 69 62 chr15 20290380 20290868 -81089653 - LTR38B LTR ERV1 -65 545 1 243 88 0 0 chr15 20291278 20291312 -81089209 + (TG)n Simple_repeat Simple_repeat 2 35 0 309 346 0 0 chr15 20291388 20291492 -81089029 - PABL_B-int LTR ERV1 -378 6744 6641 1353 261 127 44 chr15 20291559 20292491 -81088030 - L1MC3 LINE L1 -913 7152 6144 583 261 51 5 chr15 20292502 20292864 -81087657 - L1MC3 LINE L1 -725 5733 5355 1669 176 168 8 chr15 20292916 20293285 -81087236 - MSTA LTR MaLR 0 428 1 5480 180 10 14 chr15 20293287 20294317 -81086204 - MSTA-int LTR MaLR -2 1578 553 541 316 128 6 chr15 20294656 20294976 -81085545 - L1MC3 LINE L1 -1033 5393 5035 22 88 0 0 chr15 20296060 20296117 -81084404 + AT_rich Low_complexity Low_complexity 1 57 0 600 201 69 0 chr15 20298028 20298202 -81082319 - L1MA7 LINE L1 0 6291 6106 1949 267 37 11 chr15 20298445 20299602 -81080919 - L1MC3 LINE L1 -3016 3410 2222 313 222 94 8 chr15 20299607 20299724 -81080797 + L1MCa LINE L1 1938 2064 -4362 550 227 70 0 chr15 20299738 20299910 -81080611 + L1MCa LINE L1 2008 2191 -4235 5653 116 3 15 chr15 20299943 20300788 -81079733 - L1PA14 LINE L1 -2 6159 5339 2104 128 0 0 chr15 20300788 20301085 -81079436 - AluY SINE Alu -12 299 3 5653 116 3 15 chr15 20301085 20301868 -81078653 - L1PA14 LINE L1 -822 5339 4549 495 246 116 30 chr15 20301966 20302198 -81078323 - MLT1E LTR MaLR -341 252 1 599 250 0 0 chr15 20302202 20302346 -81078175 - L1MD3 LINE L1 -282 7713 7570 282 29 0 0 chr15 20302569 20302604 -81077917 + (CAA)n Simple_repeat Simple_repeat 2 36 0 2001 118 34 3 chr15 20302626 20302922 -81077599 + AluSx SINE Alu 1 305 -7 1665 232 101 15 chr15 20302942 20303537 -81076984 - L1MC3 LINE L1 -28 7757 7112 2413 172 45 4 chr15 20303560 20303907 -81076614 - L1PB3 LINE L1 -7 6147 5775 321 26 0 0 chr15 20303907 20303945 -81076576 + (CA)n Simple_repeat Simple_repeat 2 39 0 2413 172 45 4 chr15 20303945 20304062 -81076459 - L1PB3 LINE L1 -379 5775 5664 360 0 0 0 chr15 20304062 20304102 -81076419 + (TG)n Simple_repeat Simple_repeat 1 40 0 342 0 0 0 chr15 20304101 20304139 -81076382 + (GA)n Simple_repeat Simple_repeat 1 38 0 * 1592 179 18 0 chr15 20304139 20304412 -81076109 - AluSx SINE Alu -34 278 1 4021 125 1 19 chr15 20304419 20305067 -81075454 + LTR8 LTR ERV1 55 691 0 1068 233 51 86 chr15 20305569 20305755 -81074766 - L1MC3 LINE L1 -472 7313 7122 2053 125 3 23 chr15 20305755 20306058 -81074463 + AluSx SINE Alu 1 297 -15 1068 233 51 86 chr15 20306058 20306404 -81074117 - L1MC3 LINE L1 -663 7122 6800 1754 258 32 5 chr15 20306533 20307098 -81073423 - L1MC3 LINE L1 -1352 6433 5854 1098 214 64 94 chr15 20307141 20307668 -81072853 - MER66A LTR ERV1 0 478 97 308 291 29 0 chr15 20307682 20307854 -81072667 - L1MC3 LINE L1 -748 5398 5222 3830 121 11 10 chr15 20307856 20308475 -81072046 - L1PA13 LINE L1 -6 6157 5538 2008 279 92 70 chr15 20308484 20310373 -81070148 - L1PA13 LINE L1 -707 5461 3528 320 191 36 12 chr15 20310468 20310552 -81069969 + MLT1E LTR MaLR 493 578 -15 786 212 48 8 chr15 20310566 20310816 -81069705 + L1MD3 LINE L1 7721 7980 -15 23 0 0 0 chr15 20310825 20310848 -81069673 + AT_rich Low_complexity Low_complexity 1 23 0 225 376 26 0 chr15 20312634 20312751 -81067770 + HsTC2 DNA Tc2 35 154 -1744 * 613 248 71 44 chr15 20312748 20313042 -81067479 + HsTC2 DNA Tc2 1233 1710 -188 2802 182 28 39 chr15 20313582 20313618 -81066903 - MSTA-int LTR MaLR -1010 641 606 2365 74 0 7 chr15 20313618 20313914 -81066607 - AluY SINE Alu -17 294 1 2802 182 28 39 chr15 20313914 20313989 -81066532 - MSTA-int LTR MaLR -1045 606 532 2253 136 0 0 chr15 20313989 20314299 -81066222 - AluSg SINE Alu 0 310 1 2802 182 28 39 chr15 20314299 20314834 -81065687 - MSTA-int LTR MaLR -1119 532 1 1938 163 129 5 chr15 20314834 20315215 -81065306 - MSTA LTR MaLR 0 428 1 2325 277 60 27 chr15 20315223 20316652 -81063869 - L1MC3 LINE L1 -1152 4994 3519 356 253 24 0 chr15 20316655 20316738 -81063783 + MLT1E LTR MaLR 350 434 -159 831 92 8 0 chr15 20317128 20317248 -81063273 - AluSg/x SINE Alu -15 295 175 294 328 35 0 chr15 20317309 20317425 -81063096 + HsTC2 DNA Tc2 35 154 -1744 693 225 65 33 chr15 20317462 20317769 -81062752 + HsTC2 DNA Tc2 1281 1773 -125 481 265 89 51 chr15 20317974 20318231 -81062290 - L1M4 LINE L1 -1127 5019 4753 1859 157 14 7 chr15 20318235 20318528 -81061993 - AluSx SINE Alu -17 295 1 1205 215 16 60 chr15 20318583 20318899 -81061622 - AluJo SINE Alu 0 302 1 22 0 0 0 chr15 20319025 20319047 -81061474 + AT_rich Low_complexity Low_complexity 1 22 0 1702 174 3 24 chr15 20319048 20319342 -81061179 - AluJb SINE Alu -24 288 1 29 28 0 0 chr15 20320511 20320547 -81059974 + AT_rich Low_complexity Low_complexity 1 36 0 780 188 71 67 chr15 20320550 20320805 -81059716 - MER4-int LTR ERV1 -127 6631 6376 595 216 57 18 chr15 20320774 20320951 -81059570 - MER4-int LTR ERV1 -593 6165 3950 * 1733 123 0 16 chr15 20321035 20321286 -81059235 + AluSc SINE Alu 45 291 -18 898 217 46 39 chr15 20321699 20322123 -81058398 - MER4-int LTR ERV1 -2138 4021 2474 739 168 41 38 chr15 20322206 20322483 -81058038 - MER4-int LTR ERV1 -2900 3698 2403 351 255 9 47 chr15 20322602 20322708 -81057813 + L1MC4 LINE L1 6614 6715 -1327 424 226 35 0 chr15 20323276 20323391 -81057130 + L1MCa LINE L1 2101 2219 -4207 423 282 153 16 chr15 20323391 20323639 -81056882 - MLT1E LTR MaLR -248 345 64 21 0 0 0 chr15 20323942 20323963 -81056558 + AT_rich Low_complexity Low_complexity 1 21 0 42 0 0 0 chr15 20324055 20324097 -81056424 + AT_rich Low_complexity Low_complexity 1 42 0 974 205 111 3 chr15 20324098 20324386 -81056135 - L1MC3 LINE L1 -19 7766 7448 580 221 15 60 chr15 20324392 20324522 -81055999 - L1MC3 LINE L1 -384 7401 7282 1704 182 3 23 chr15 20324522 20324829 -81055692 - AluJo SINE Alu -11 301 1 580 221 15 60 chr15 20324829 20324897 -81055624 - L1MC3 LINE L1 -503 7282 7212 6352 119 24 44 chr15 20324897 20326105 -81054416 - MER11C LTR ERVK 0 1071 1 329 315 23 8 chr15 20326106 20326236 -81054285 - L1MC3 LINE L1 -571 7214 7083 1089 281 64 53 chr15 20326254 20327416 -81053105 - L1M4 LINE L1 -1453 4693 3520 455 214 304 6 chr15 20327424 20327592 -81052929 + MLT1E LTR MaLR 376 593 0 730 240 24 12 chr15 20327600 20327850 -81052671 + L1MD3 LINE L1 7731 7983 -12 667 237 29 35 chr15 20328211 20328384 -81052137 + FAM SINE Alu 3 174 -1 2066 128 0 3 chr15 20328445 20328743 -81051778 - AluY SINE Alu -14 297 1 1734 247 36 25 chr15 20328869 20329392 -81051129 + MER54A LTR ERVL 1 529 -372 1622 259 38 30 chr15 20329476 20330006 -81050515 - MLT2B3 LTR ERVL -20 534 1 2512 206 14 26 chr15 20330006 20330423 -81050098 - ERVL-B3 LTR ERVL -7 5757 5337 186 118 0 0 chr15 20330423 20330457 -81050064 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 2279 81 3 0 chr15 20330460 20330745 -81049776 - AluY SINE Alu -25 286 1 2512 206 14 26 chr15 20330745 20330948 -81049573 - ERVL-B3 LTR ERVL -429 5335 5140 1778 216 31 33 chr15 20330952 20331377 -81049144 - MSTC LTR MaLR -2 426 3 238 308 67 0 chr15 20331380 20331500 -81049021 - MSTC-int LTR MaLR -1 1734 1607 2360 232 19 52 chr15 20331563 20332253 -81048268 - LTR8 LTR ERV1 -9 682 16 1094 291 19 6 chr15 20332286 20332602 -81047919 - HUERS-P1 LTR ERV1 0 6263 5944 865 210 179 14 chr15 20332681 20332971 -81047550 - PRIMA41-int LTR ERV1 -57 6274 5937 9334 179 40 89 chr15 20333142 20334120 -81046401 - PRIMA41-int LTR ERV1 -524 5422 4398 207 0 0 0 chr15 20334120 20334143 -81046378 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 9334 179 40 89 chr15 20334143 20334299 -81046222 - PRIMA41-int LTR ERV1 -1548 4398 4236 1595 202 11 11 chr15 20334299 20334586 -81045935 - AluJo SINE Alu -23 289 3 9334 179 40 89 chr15 20334586 20336470 -81044051 - PRIMA41-int LTR ERV1 -1710 4236 1816 1000 261 77 54 chr15 20336530 20337012 -81043509 - PRIMA41-int LTR ERV1 -4114 3423 2931 2543 223 33 27 chr15 20337027 20337881 -81042640 - PRIMA41-int LTR ERV1 -2594 2286 1280 946 211 150 85 chr15 20337881 20338222 -81042299 - LTR8 LTR ERV1 -364 363 1 838 297 55 72 chr15 20338222 20338752 -81041769 - MSTC-int LTR MaLR -221 1430 923 376 179 0 0 chr15 20338766 20338850 -81041671 + MSTC LTR MaLR 345 428 0 428 231 10 128 chr15 20338850 20339053 -81041468 + MSTC-int LTR MaLR 1 179 -1472 3110 215 13 7 chr15 20339055 20339753 -81040768 - ERVL-B3 LTR ERVL -1001 4763 4062 484 292 26 17 chr15 20339764 20339945 -81040576 - PRIMA41-int LTR ERV1 -1990 5766 5581 1933 116 0 77 chr15 20339945 20340272 -81040249 + AluSg SINE Alu 1 302 -8 484 292 26 17 chr15 20340272 20340323 -81040198 - PRIMA41-int LTR ERV1 -2175 5581 5532 9670 232 62 8 chr15 20340845 20343395 -81037126 - ERVL-B3 LTR ERVL -2904 2860 172 1892 219 46 48 chr15 20343558 20343968 -81036553 - MLT2B3 LTR ERVL -8 546 136 4185 176 22 7 chr15 20343968 20344739 -81035782 - LTR39 LTR ERV1 0 783 1 1892 219 46 48 chr15 20344739 20344875 -81035646 - MLT2B3 LTR ERVL -418 136 1 1259 236 50 11 chr15 20344875 20345235 -81035286 + MER54A LTR ERVL 523 896 -5 450 254 102 44 chr15 20345717 20345952 -81034569 + HsTC2 DNA Tc2 1507 1770 -128 4775 56 0 0 chr15 20345952 20346543 -81033978 + LTR10C LTR ERV1 1 591 0 450 254 102 44 chr15 20346543 20346649 -81033872 + HsTC2 DNA Tc2 1770 1868 -30 501 222 102 6 chr15 20346732 20346908 -81033613 - MER4C LTR ERV1 0 465 273 409 225 48 11 chr15 20346968 20347185 -81033336 - MER4A LTR ERV1 -203 262 6 7356 189 52 59 chr15 20347186 20349319 -81031202 - MER4A-int LTR ERV1 -8 6590 2831 1625 201 3 16 chr15 20349319 20349622 -81030899 + AluJb SINE Alu 1 299 -13 7356 189 52 59 chr15 20349622 20350129 -81030392 - MER4A-int LTR ERV1 -3767 2831 2322 1513 230 0 3 chr15 20350169 20350460 -81030061 - AluJo SINE Alu -22 290 1 1605 186 48 81 chr15 20350510 20351015 -81029506 - MER4C-int LTR ERV1 -1952 2928 2441 415 137 14 0 chr15 20351019 20351092 -81029429 - L1PA15 LINE L1 -18 6147 6074 363 184 122 10 chr15 20351223 20351321 -81029200 - MER4C-int LTR ERV1 -5232 1099 991 304 51 0 0 chr15 20351333 20351372 -81029149 - MER4C-int LTR ERV1 -4795 1151 1113 441 209 23 16 chr15 20351558 20351687 -81028834 - MER4C-int LTR ERV1 -6356 242 113 714 213 25 35 chr15 20351782 20352264 -81028257 - MER4C LTR ERV1 0 695 3 343 324 75 42 chr15 20352489 20352688 -81027833 - L1M4 LINE L1 -1050 5096 4882 2435 84 3 0 chr15 20352688 20352997 -81027524 + AluY SINE Alu 1 310 -1 343 324 75 42 chr15 20352997 20353103 -81027418 - L1M4 LINE L1 -1264 4882 4781 1743 118 95 0 chr15 20353106 20353258 -81027263 - AluSx SINE Alu -24 288 152 189 0 0 0 chr15 20353258 20353279 -81027242 + (TTTTA)n Simple_repeat Simple_repeat 2 22 0 1743 118 95 0 chr15 20353279 20353389 -81027132 - AluSx SINE Alu -160 152 1 463 193 42 8 chr15 20353590 20353709 -81026812 + LTR47A LTR ERVL 1 123 -329 341 250 12 0 chr15 20353759 20353843 -81026678 + LTR47B LTR ERVL 359 443 0 310 234 0 0 chr15 20354773 20354850 -81025671 + LTR57-int LTR ERVL 1248 1324 -4723 390 326 34 8 chr15 20355473 20355730 -81024791 + LTR57-int LTR ERVL 1852 2086 -1332 521 361 22 26 chr15 20355828 20356077 -81024444 + LTR57-int LTR ERVL 2312 2561 -2782 1839 162 3 10 chr15 20356077 20356374 -81024147 + AluSq SINE Alu 1 295 -18 521 361 22 26 chr15 20356374 20356817 -81023704 + LTR57-int LTR ERVL 2561 3001 -2342 892 266 47 6 chr15 20357026 20357620 -81022901 - L1MCa LINE L1 -3595 2831 2213 1029 146 22 95 chr15 20357626 20357941 -81022580 + L1MCa LINE L1 1925 2216 -4210 410 282 124 71 chr15 20357949 20358272 -81022249 - MLT1E LTR MaLR -253 340 1 659 223 0 0 chr15 20358277 20358425 -81022096 - L1MD3 LINE L1 -283 7712 7565 28 29 0 0 chr15 20358431 20358466 -81022055 + AT_rich Low_complexity Low_complexity 1 35 0 4200 253 68 45 chr15 20358672 20359485 -81021036 - L1MC3 LINE L1 -6 7779 6986 2227 125 0 0 chr15 20359485 20359796 -81020725 - AluY SINE Alu 0 311 1 4200 253 68 45 chr15 20359796 20360577 -81019944 - L1MC3 LINE L1 -799 6986 6134 1814 157 3 26 chr15 20360577 20360889 -81019632 - AluSx SINE Alu -7 305 1 4200 253 68 45 chr15 20360889 20361167 -81019354 - L1MC3 LINE L1 -1651 6134 5864 559 251 36 5 chr15 20361177 20361510 -81019011 - L1MC3 LINE L1 -720 5454 5113 231 213 32 32 chr15 20361507 20361601 -81018920 - L1MC3 LINE L1 -987 5159 5066 * 2299 126 55 2 chr15 20361601 20361999 -81018522 - MSTA LTR MaLR 0 428 10 413 286 82 5 chr15 20362048 20362268 -81018253 - L1MC3 LINE L1 -1121 5025 4789 7069 96 4 19 chr15 20362310 20363383 -81017138 - MER11C LTR ERVK -14 1057 1 6217 201 31 54 chr15 20363395 20366098 -81014423 - L1MA1 LINE L1 -17 6285 3654 1437 198 3 75 chr15 20367056 20367375 -81013146 - AluJo SINE Alu -6 296 1 467 258 258 5 chr15 20367379 20367577 -81012944 + MLT1E LTR MaLR 346 593 0 800 214 30 17 chr15 20367604 20367838 -81012683 + L1MD3 LINE L1 7745 7981 -14 23 0 0 0 chr15 20367844 20367867 -81012654 + AT_rich Low_complexity Low_complexity 1 23 0 766 208 0 0 chr15 20367871 20368015 -81012506 + FRAM SINE Alu 13 156 -20 28 48 0 0 chr15 20368362 20368404 -81012117 + AT_rich Low_complexity Low_complexity 1 42 0 285 29 0 0 chr15 20368602 20368636 -81011885 + (TA)n Simple_repeat Simple_repeat 2 35 0 1543 202 0 4 chr15 20368770 20369047 -81011474 + AluJb SINE Alu 1 276 -36 316 198 12 12 chr15 20369047 20369133 -81011388 + GA-rich Low_complexity Low_complexity 3 88 0 272 301 0 0 chr15 20369929 20370012 -81010509 - MER66A-int LTR ERV1 -6387 735 653 273 333 0 0 chr15 20370733 20370823 -81009698 - MER66A-int LTR ERV1 -971 815 726 774 329 25 33 chr15 20371104 20371499 -81009022 - MER66A-int LTR ERV1 -1342 444 53 1544 81 8 8 chr15 20371520 20371756 -81008765 - L1PA12 LINE L1 -191 5977 5742 850 225 89 52 chr15 20371760 20372084 -81008437 - MER66A LTR ERV1 -46 432 97 3069 275 61 28 chr15 20372244 20374025 -81006496 - L1M4 LINE L1 -744 5402 3564 330 190 52 16 chr15 20374066 20374248 -81006273 + MLT1E LTR MaLR 350 593 0 681 230 34 19 chr15 20374250 20374515 -81006006 + L1MD3 LINE L1 7724 7992 -3 306 325 26 0 chr15 20376631 20376748 -81003773 + HsTC2 DNA Tc2 35 154 -1744 * 688 286 29 58 chr15 20376743 20377226 -81003295 + HsTC2 DNA Tc2 1231 1875 -23 348 353 31 9 chr15 20377496 20377720 -81002801 - L1M4 LINE L1 -1034 5112 4884 1318 240 0 13 chr15 20377854 20378158 -81002363 - AluJo SINE Alu -12 300 1 2848 7 0 0 chr15 20378610 20378918 -81001603 + AluY SINE Alu 1 308 -3 259 78 0 4 chr15 20380199 20380418 -81000103 + AluSx SINE Alu 1 300 0 * 284 301 65 63 chr15 20380415 20380904 -80999617 - LTR38 LTR ERV1 -66 490 1 22 35 0 0 chr15 20381172 20381201 -80999320 + AT_rich Low_complexity Low_complexity 1 29 0 312 27 0 0 chr15 20381312 20381349 -80999172 + (TG)n Simple_repeat Simple_repeat 2 38 0 2679 211 88 21 chr15 20381585 20382292 -80998229 - MER49 LTR ERV1 -169 754 1 1134 208 22 45 chr15 20382293 20382667 -80997854 - MER49-int LTR ERV1 -3 7093 6376 624 212 57 18 chr15 20382636 20382813 -80997708 - MER49-int LTR ERV1 -593 6165 3950 * 1682 106 16 8 chr15 20382897 20383142 -80997379 + AluSc SINE Alu 45 291 -18 261 174 0 151 chr15 20383374 20383460 -80997061 - MER49-int LTR ERV1 -4262 3858 3786 977 207 34 37 chr15 20383547 20383979 -80996542 - LTR49-int LTR ERV1 -2147 4184 3731 756 205 43 75 chr15 20384059 20384474 -80996047 - LTR49-int LTR ERV1 -2900 3698 3297 1662 280 4 6 chr15 20384478 20384957 -80995564 - ERVL LTR ERVL -3961 1803 1326 1001 187 6 11 chr15 20384961 20385143 -80995378 - AluSp SINE Alu -18 295 115 1844 15 0 0 chr15 20385243 20385444 -80995077 - AluYa5 SINE Alu -3 308 108 2611 29 0 0 chr15 20385444 20385787 -80994734 - L1P LINE L1 -781 5365 5023 5258 124 2 17 chr15 20385935 20386773 -80993748 - L1PA14 LINE L1 -2 6159 5333 2116 112 7 0 chr15 20386773 20387067 -80993454 - AluY SINE Alu -13 298 3 5258 124 2 17 chr15 20387067 20387123 -80993398 - L1PA14 LINE L1 -828 5333 5278 2439 181 18 13 chr15 20387229 20388135 -80992386 - L1P5 LINE L1 -479 5675 4767 478 313 79 58 chr15 20388146 20389325 -80991196 - L1PA15-16 LINE L1 -5685 1178 3 532 243 100 21 chr15 20389343 20389582 -80990939 - L1MC3 LINE L1 -659 7126 6869 1675 261 89 57 chr15 20389597 20389958 -80990563 - L1MC3 LINE L1 -831 7023 6675 342 80 0 0 chr15 20389958 20390008 -80990513 + (CA)n Simple_repeat Simple_repeat 1 50 0 1675 261 89 57 chr15 20390008 20390713 -80989808 - L1MC3 LINE L1 -1179 6675 5923 1053 269 53 19 chr15 20390713 20391376 -80989145 - L1MC3 LINE L1 -720 5523 4846 1171 256 35 31 chr15 20391391 20391903 -80988618 - L1MC3 LINE L1 -2105 4110 3597 299 309 10 0 chr15 20391910 20392007 -80988514 + MLT1E LTR MaLR 345 442 -151 416 255 148 16 chr15 20392089 20392332 -80988189 + L1MD3 LINE L1 7721 7995 0 387 316 85 9 chr15 20393661 20393873 -80986648 - L1MC3 LINE L1 -6077 319 92 412 284 21 0 chr15 20393983 20394124 -80986397 - L1MD3 LINE L1 -281 7714 7571 1129 150 0 0 chr15 20394224 20394384 -80986137 + AluSx SINE Alu 1 160 -152 1057 278 62 4 chr15 20394389 20394856 -80985665 - L1M4 LINE L1 -872 5274 4781 * 1161 245 86 11 chr15 20394854 20395331 -80985190 - L1M4 LINE L1 -2115 4031 3519 343 238 12 0 chr15 20395332 20395412 -80985109 + MLT1E LTR MaLR 349 429 -164 993 195 53 0 chr15 20395502 20395748 -80984773 + L1MD3 LINE L1 7724 7982 -13 2253 140 28 6 chr15 20396366 20396722 -80983799 - THE1B LTR MaLR 0 364 1 1598 221 6 3 chr15 20398539 20398878 -80981643 + MER54A LTR ERVL 24 363 -538 673 196 14 0 chr15 20398933 20399076 -80981445 - L1MD3 LINE L1 -282 7713 7569 2530 218 83 31 chr15 20399302 20399912 -80980609 - L1MC3 LINE L1 -4 7781 7111 2041 127 3 23 chr15 20399912 20400212 -80980309 + AluSx SINE Alu 1 294 -18 2530 218 83 31 chr15 20400212 20400470 -80980051 - L1MC3 LINE L1 -674 7111 6868 1700 264 32 5 chr15 20400755 20401320 -80979201 - L1MC3 LINE L1 -1352 6433 5854 1040 213 66 99 chr15 20401363 20401890 -80978631 - MER66A LTR ERV1 0 478 97 286 254 28 28 chr15 20401904 20402081 -80978440 - L1MC3 LINE L1 -748 5398 5222 1025 120 23 11 chr15 20402083 20402258 -80978263 - L1PA13 LINE L1 -6 6157 5981 2976 268 70 19 chr15 20402258 20403798 -80976723 - L1MC3 LINE L1 -994 5152 3535 351 202 30 10 chr15 20403900 20403999 -80976522 + MLT1E LTR MaLR 493 593 0 700 186 54 58 chr15 20404001 20404074 -80976447 + L1MD3 LINE L1 7724 7796 -199 2128 102 0 3 chr15 20404074 20404381 -80976140 + AluY SINE Alu 1 306 0 700 186 54 58 chr15 20404381 20404564 -80975957 + L1MD3 LINE L1 7796 7980 -15 23 0 0 0 chr15 20404573 20404596 -80975925 + AT_rich Low_complexity Low_complexity 1 23 0 299 350 26 0 chr15 20406387 20406504 -80974017 + HsTC2 DNA Tc2 35 154 -1744 * 595 241 85 58 chr15 20406501 20406795 -80973726 + HsTC2 DNA Tc2 1233 1710 -188 467 241 100 69 chr15 20407284 20407574 -80972947 - L1M4 LINE L1 -1095 5051 4753 1911 137 14 7 chr15 20407587 20407872 -80972649 - AluSx SINE Alu -20 292 6 1129 244 3 48 chr15 20407933 20408249 -80972272 - AluJo SINE Alu 0 302 1 24 0 0 0 chr15 20408372 20408396 -80972125 + AT_rich Low_complexity Low_complexity 1 24 0 1757 162 3 30 chr15 20408397 20408693 -80971828 - AluJb SINE Alu -24 288 1 1349 72 11 0 chr15 20409474 20409654 -80970867 + AluY SINE Alu 117 298 -13 1387 94 0 0 chr15 20410496 20410676 -80969845 + AluSx SINE Alu 1 180 -132 307 292 63 63 chr15 20410703 20411193 -80969328 - LTR38 LTR ERV1 -66 490 1 252 59 0 0 chr15 20411603 20411637 -80968884 + (TG)n Simple_repeat Simple_repeat 2 35 0 332 345 0 0 chr15 20411713 20411829 -80968692 - LOR1-int LTR ERV1 -378 6744 6629 1702 203 32 23 chr15 20411874 20412583 -80967938 - MER49 LTR ERV1 -169 754 1 1378 203 19 11 chr15 20412584 20412949 -80967572 - MER49-int LTR ERV1 -3 7096 6376 611 202 101 18 chr15 20412918 20413086 -80967435 - MER49-int LTR ERV1 -593 6165 5984 * 1786 105 4 8 chr15 20413178 20413426 -80967095 + AluSc SINE Alu 45 291 -18 21 0 0 0 chr15 20413462 20413483 -80967038 + AT_rich Low_complexity Low_complexity 1 21 0 858 222 26 27 chr15 20413689 20414107 -80966414 - LOR1-int LTR ERV1 -2148 4183 3731 1104 182 59 97 chr15 20414145 20414690 -80965831 - LOR1-int LTR ERV1 -2869 3729 3206 745 145 0 16 chr15 20414735 20414919 -80965602 - LOR1-int LTR ERV1 -3378 3220 1814 3296 264 45 20 chr15 20415026 20415227 -80965294 - ERVL-B3 LTR ERVL -4441 1252 1058 826 219 0 18 chr15 20415227 20415396 -80965125 - FRAM SINE Alu 0 166 1 3296 264 45 20 chr15 20415396 20416397 -80964124 - ERVL-B3 LTR ERVL -4635 1058 1 698 236 13 52 chr15 20416397 20416459 -80964062 - MLT2B3 LTR ERVL 0 554 491 315 0 0 0 chr15 20416459 20416494 -80964027 + (TAGA)n Simple_repeat Simple_repeat 1 35 0 698 236 13 52 chr15 20416494 20416660 -80963861 - MLT2B3 LTR ERVL -63 491 335 1539 249 123 40 chr15 20416740 20417681 -80962840 - L1MC3 LINE L1 -913 7152 6134 2575 271 70 24 chr15 20417682 20418088 -80962433 - L1MC3 LINE L1 -725 5733 5347 1569 188 169 5 chr15 20418088 20418456 -80962065 - MSTA LTR MaLR 0 428 1 8038 191 18 22 chr15 20418458 20419496 -80961025 - MSTA-int LTR MaLR -2 1649 608 183 42 0 0 chr15 20419496 20419520 -80961001 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2081 98 0 7 chr15 20419530 20419806 -80960715 - AluY SINE Alu -37 274 1 8038 191 18 22 chr15 20419806 20419873 -80960648 - MSTA-int LTR MaLR -1052 599 533 2283 118 3 0 chr15 20419873 20420177 -80960344 - AluSg SINE Alu 0 310 6 8038 191 18 22 chr15 20420177 20420716 -80959805 - MSTA-int LTR MaLR -1118 533 1 1864 144 155 11 chr15 20420716 20421090 -80959431 - MSTA LTR MaLR 0 428 1 2575 271 70 24 chr15 20421090 20422532 -80957989 - L1MC3 LINE L1 -1110 5348 3799 519 212 264 5 chr15 20422536 20422729 -80957792 + MLT1E LTR MaLR 351 593 0 722 233 29 10 chr15 20422735 20422941 -80957580 + L1MD3 LINE L1 7729 7938 -57 26 0 0 0 chr15 20422941 20422967 -80957554 + AT_rich Low_complexity Low_complexity 1 26 0 24 0 0 0 chr15 20422995 20423019 -80957502 + AT_rich Low_complexity Low_complexity 1 24 0 1923 248 38 25 chr15 20425190 20426358 -80954163 - L1MC3 LINE L1 -3015 3411 2227 242 215 37 52 chr15 20426353 20426488 -80954033 + L1MCa LINE L1 1936 2068 -4358 * 542 220 45 11 chr15 20426480 20426657 -80953864 + L1MCa LINE L1 2008 2190 -4236 26 30 0 0 chr15 20426657 20426690 -80953831 + AT_rich Low_complexity Low_complexity 1 33 0 5400 116 5 16 chr15 20426694 20427531 -80952990 - L1PA14 LINE L1 -3 6158 5339 2083 100 3 7 chr15 20427531 20427821 -80952700 - AluSc SINE Alu -19 290 2 5400 116 5 16 chr15 20427821 20428605 -80951916 - L1PA14 LINE L1 -822 5339 4547 549 236 88 32 chr15 20428713 20428929 -80951592 - MLT1E LTR MaLR -365 228 1 618 210 3 0 chr15 20428934 20429077 -80951444 - L1MD3 LINE L1 -299 7696 7488 1893 146 36 3 chr15 20429349 20429651 -80950870 + AluSx SINE Alu 1 312 0 1753 240 102 7 chr15 20429668 20430255 -80950266 - L1MC3 LINE L1 -31 7754 7112 2084 153 57 5 chr15 20430278 20430624 -80949897 - L1PB3 LINE L1 -7 6147 5778 393 22 0 0 chr15 20430624 20430670 -80949851 + (CA)n Simple_repeat Simple_repeat 2 47 0 2084 153 57 5 chr15 20430670 20430709 -80949812 - L1PB3 LINE L1 -376 5778 5742 560 208 71 0 chr15 20431804 20431972 -80948549 - L1MA7 LINE L1 -6 6285 6106 1925 269 39 11 chr15 20432215 20433370 -80947151 - L1MCa LINE L1 -3016 3410 2222 312 221 47 55 chr15 20433375 20433502 -80947019 + L1MCa LINE L1 1936 2061 -4365 496 207 120 0 chr15 20433504 20433654 -80946867 + L1MCa LINE L1 2007 2174 -4252 24 32 0 0 chr15 20433669 20433700 -80946821 + AT_rich Low_complexity Low_complexity 1 31 0 7272 38 11 0 chr15 20433700 20434909 -80945612 - L1PA3 LINE L1 -5 6150 4936 276 29 0 0 chr15 20434909 20434944 -80945577 + L1P LINE L1 4368 4402 -1744 7449 163 48 9 chr15 20434944 20437157 -80943364 - MER50-int LTR ERV1 -804 4076 3039 555 223 8 8 chr15 20437157 20437278 -80943243 - MER50-int LTR ERV1 -4296 2909 2789 * 7658 162 93 22 chr15 20437272 20438967 -80941554 - MER50-int LTR ERV1 -436 4781 4 1481 193 21 59 chr15 20438976 20439364 -80941157 - MER50 LTR ERV1 -10 724 352 649 207 37 24 chr15 20439446 20439610 -80940911 - MER50 LTR ERV1 -568 166 1 6681 261 36 26 chr15 20439610 20441679 -80938842 - ERVL-B2 LTR ERVL -3502 2262 172 2379 92 3 0 chr15 20441717 20442020 -80938501 + AluSx SINE Alu 1 304 -8 500 251 33 47 chr15 20442142 20442353 -80938168 - MLT2B2 LTR ERVL 0 515 308 710 292 32 83 chr15 20442452 20442595 -80937926 - L1MC3 LINE L1 -922 6863 6714 2047 155 0 0 chr15 20442595 20442892 -80937629 + AluSx SINE Alu 1 297 -15 710 292 32 83 chr15 20442892 20443183 -80937338 - L1MC3 LINE L1 -1071 6714 6451 4160 163 20 4 chr15 20443201 20443901 -80936620 - MER50 LTR ERV1 -23 711 1 2138 134 15 149 chr15 20443917 20444453 -80936068 - Tigger4(Zombi) DNA MER2_type 0 2731 2268 4761 167 138 15 chr15 20444454 20444604 -80935917 + Tigger3b DNA MER2_type 2 132 -2896 2093 210 59 11 chr15 20444604 20445042 -80935479 + LOR1b LTR ERV1 1 459 -2 4761 167 138 15 chr15 20445042 20445986 -80934535 + Tigger3b DNA MER2_type 132 1231 0 955 181 17 6 chr15 20445999 20446176 -80934345 - Tigger4(Zombi) DNA MER2_type -489 2242 2064 1278 231 79 36 chr15 20446213 20446681 -80933840 - L1MC3 LINE L1 -1375 6410 5923 1048 132 0 0 chr15 20446800 20446944 -80933577 - AluSg/x SINE Alu -16 296 153 1025 260 70 28 chr15 20446944 20447556 -80932965 - L1MC3 LINE L1 -748 5398 4783 3756 146 172 110 chr15 20447634 20449029 -80931492 - pTR5 LTR ERV1 -133 2021 36 279 303 92 7 chr15 20449372 20449514 -80931007 + HsTC2 DNA Tc2 1 154 -1744 * 296 287 157 28 chr15 20449511 20449727 -80930794 + HsTC2 DNA Tc2 1233 1652 -246 1962 141 10 16 chr15 20449793 20450105 -80930416 - AluSg SINE Alu 0 310 1 183 315 41 14 chr15 20450266 20450339 -80930182 - MIR SINE MIR -48 214 140 265 253 84 45 chr15 20450489 20450691 -80929830 - L1M4 LINE L1 -1054 5092 4883 576 179 0 0 chr15 20450857 20450969 -80929552 + CT-rich Low_complexity Low_complexity 3 114 0 1583 221 0 3 chr15 20450971 20451265 -80929256 - AluJb SINE Alu -19 293 1 2521 265 78 81 chr15 20451451 20452670 -80927851 - MSTC-int LTR MaLR -434 1217 3 1636 236 30 10 chr15 20452685 20453091 -80927430 - MSTC LTR MaLR -14 414 1 3411 254 21 8 chr15 20453101 20453945 -80926576 - ERVL-B3 LTR ERVL -637 5127 4273 * 5895 210 34 3 chr15 20453941 20455099 -80925422 - ERVL-B3 LTR ERVL -1720 4044 2852 3963 230 40 1 chr15 20455246 20456124 -80924397 - ERVL-B3 LTR ERVL -2915 2849 1938 2083 211 27 52 chr15 20456297 20457103 -80923418 - LTR27 LTR ERV1 -140 496 3 2436 278 5 5 chr15 20457103 20457719 -80922802 - ERVL-B3 LTR ERVL -3823 1941 1326 1271 184 0 5 chr15 20457723 20457946 -80922575 - AluSq SINE Alu -10 303 82 976 55 0 24 chr15 20457993 20458120 -80922401 - L1PA4 LINE L1 0 6155 6032 619 176 0 0 chr15 20458124 20458215 -80922306 - AluSq SINE Alu -221 91 1 4137 265 79 18 chr15 20458215 20458492 -80922029 - ERVL-B3 LTR ERVL -4433 1331 1072 900 200 0 51 chr15 20458492 20458667 -80921854 - FRAM SINE Alu 0 166 1 4137 265 79 18 chr15 20458667 20459643 -80920878 - ERVL-B3 LTR ERVL -4692 1072 2 666 258 13 64 chr15 20459644 20459714 -80920807 - MLT2B3 LTR ERVL 0 554 482 456 19 0 0 chr15 20459714 20459767 -80920754 + (TAGA)n Simple_repeat Simple_repeat 1 53 0 666 258 13 64 chr15 20459767 20459929 -80920592 - MLT2B3 LTR ERVL -72 482 334 1826 253 126 42 chr15 20460008 20460942 -80919579 - L1MC3 LINE L1 -913 6872 5860 682 252 55 10 chr15 20460942 20461304 -80919217 - L1MC3 LINE L1 -720 5458 5079 1882 169 169 5 chr15 20461355 20461723 -80918798 - MSTA LTR MaLR 0 428 1 9017 193 18 10 chr15 20461725 20462766 -80917755 - MSTA-int LTR MaLR -2 1649 618 2405 70 0 7 chr15 20462766 20463067 -80917454 - AluY SINE Alu -12 299 1 9017 193 18 10 chr15 20463067 20463127 -80917394 - MSTA-int LTR MaLR -1033 618 560 2361 112 0 0 chr15 20463127 20463430 -80917091 - AluSg SINE Alu -7 303 1 9017 193 18 10 chr15 20463430 20463962 -80916559 - MSTA-int LTR MaLR -1091 560 1 2154 170 123 5 chr15 20463962 20464345 -80916176 - MSTA LTR MaLR 0 428 1 808 267 27 52 chr15 20464451 20464781 -80915740 - L1MC3 LINE L1 -2306 3840 3519 618 238 264 5 chr15 20464785 20464978 -80915543 + MLT1E LTR MaLR 351 593 0 977 219 29 8 chr15 20464984 20465230 -80915291 + L1MD3 LINE L1 7729 7979 -16 884 65 16 0 chr15 20467739 20467862 -80912659 - AluSp/q SINE Alu -12 301 177 262 342 44 0 chr15 20467924 20468038 -80912483 + HsTC2 DNA Tc2 36 154 -1744 807 238 65 23 chr15 20468075 20468447 -80912074 + HsTC2 DNA Tc2 1281 1848 -50 435 345 98 9 chr15 20468702 20469050 -80911471 - L1M4 LINE L1 -1013 5133 4755 28 71 0 0 chr15 20470112 20470168 -80910353 + AT_rich Low_complexity Low_complexity 1 56 0 606 138 0 0 chr15 20471294 20471388 -80909133 - L1P5 LINE L1 -397 5757 5664 378 0 0 0 chr15 20471388 20471430 -80909091 + (TG)n Simple_repeat Simple_repeat 1 42 0 285 129 6 0 chr15 20471446 20471494 -80909027 - Alu SINE Alu -20 282 242 1161 277 73 38 chr15 20471531 20472343 -80908178 - L1M4 LINE L1 -1659 4487 3648 1365 195 6 114 chr15 20473293 20473626 -80906895 - AluJo SINE Alu -5 297 1 584 219 265 15 chr15 20473632 20473828 -80906693 + MLT1E LTR MaLR 349 593 0 930 205 29 20 chr15 20473855 20474099 -80906422 + L1MD3 LINE L1 7745 7990 -5 791 217 0 0 chr15 20474121 20474264 -80906257 + FRAM SINE Alu 13 155 -21 31 26 0 0 chr15 20474611 20474649 -80905872 + AT_rich Low_complexity Low_complexity 1 38 0 308 194 28 14 chr15 20474890 20474962 -80905559 + L1MCa LINE L1 1996 2068 -4358 195 184 0 0 chr15 20474964 20475002 -80905519 + (TATG)n Simple_repeat Simple_repeat 1 38 0 1466 192 0 38 chr15 20475135 20475422 -80905099 + AluJb SINE Alu 1 276 -36 277 205 13 13 chr15 20475422 20475500 -80905021 + GA-rich Low_complexity Low_complexity 3 80 0 617 213 8 0 chr15 20476770 20476892 -80903629 - LTR47A LTR ERVL -3 449 327 1770 305 58 45 chr15 20477048 20478202 -80902319 - PABL_B-int LTR ERV1 -251 7505 6337 2262 316 47 44 chr15 20478811 20480546 -80899975 - PABL_B-int LTR ERV1 -2913 4209 2511 29 0 0 0 chr15 20532656 20532685 -80847836 + AT_rich Low_complexity Low_complexity 1 29 0 1017 136 81 10 chr15 20532981 20533179 -80847342 - MER101 LTR ERV1 -1 473 262 1710 148 93 0 chr15 20533186 20533308 -80847213 + AluSx SINE Alu 9 118 -194 216 0 0 0 chr15 20533308 20533332 -80847189 + (TAAA)n Simple_repeat Simple_repeat 2 25 0 1710 148 93 0 chr15 20533332 20533487 -80847034 + AluSx SINE Alu 118 312 0 719 158 0 0 chr15 20533525 20533645 -80846876 - MER101 LTR ERV1 -354 120 1 300 365 33 39 chr15 20533748 20533929 -80846592 - HAL1 LINE L1 -2326 181 2 653 208 48 24 chr15 20534701 20534908 -80845613 - AluSg/x SINE Alu -11 298 87 4180 203 22 18 chr15 20535023 20535059 -80845462 - L1MB2 LINE L1 -14 6393 6359 771 227 7 7 chr15 20535059 20535209 -80845312 - FRAM SINE Alu -16 150 1 4180 203 22 18 chr15 20535209 20535552 -80844969 - L1MB2 LINE L1 -48 6359 6019 1114 186 53 9 chr15 20535552 20535778 -80844743 + MER46A DNA MER2_type 1 236 0 4180 203 22 18 chr15 20535778 20536917 -80843604 - L1MB2 LINE L1 -388 6019 4874 2047 185 67 85 chr15 20536935 20537478 -80843043 + MER67B LTR ERV1 1 486 -175 2810 176 75 52 chr15 20537478 20538189 -80842332 - LTR8A LTR ERV1 0 727 1 2047 185 67 85 chr15 20538189 20538221 -80842300 + MER67B LTR ERV1 486 517 -144 5568 132 31 13 chr15 20539299 20540763 -80839758 - L1P LINE L1 -1277 4869 3183 1698 213 35 25 chr15 20540863 20541374 -80839147 - L1MB2 LINE L1 -4696 1688 1173 554 269 88 35 chr15 20541370 20541473 -80839048 - L1MB2 LINE L1 -5499 885 789 * 2240 102 6 13 chr15 20541473 20541787 -80838734 + AluSx SINE Alu 1 312 0 554 269 88 35 chr15 20541787 20542025 -80838496 - L1MB2 LINE L1 -5595 789 526 309 316 35 18 chr15 20543399 20543513 -80837008 - MIR SINE MIR -73 135 20 247 286 0 13 chr15 20544491 20544568 -80835953 + MIR SINE MIR 128 203 -59 709 294 59 88 chr15 20544840 20545532 -80834989 - L2 LINE L2 -1 3312 2633 808 103 9 9 chr15 20545532 20545648 -80834873 + AluSg1 SINE Alu 1 116 -193 1962 123 10 10 chr15 20545856 20546175 -80834346 - AluSx SINE Alu 0 312 1 1969 150 7 3 chr15 20546179 20546473 -80834048 - AluSx SINE Alu -16 296 2 2294 119 44 0 chr15 20546542 20546885 -80833636 + Tigger3(Golem) DNA MER2_type 2604 2961 -68 2494 172 78 38 chr15 20546886 20547086 -80833435 + MER4B LTR ERV1 1 192 -418 1965 138 17 0 chr15 20547086 20547383 -80833138 + AluSx SINE Alu 4 305 -7 2494 172 78 38 chr15 20547383 20547734 -80832787 + MER4B LTR ERV1 192 574 -36 238 246 82 0 chr15 20547769 20547830 -80832691 + Tigger3(Golem) DNA MER2_type 2963 3028 -1 407 274 40 0 chr15 20548188 20548312 -80832209 + L1MEc LINE L1 111 239 -6157 1214 171 5 0 chr15 20548777 20548982 -80831539 + MER47A DNA MER2_type 3 208 -158 495 217 9 17 chr15 20549397 20549545 -80830976 + ALR/Alpha Satellite centromeric 1 146 -62 416 225 25 17 chr15 20549837 20549957 -80830564 - Tigger5 DNA MER2_type -22 2301 2181 3032 198 34 16 chr15 20550177 20550820 -80829701 + L1PA16 LINE L1 5493 6147 -19 313 113 38 0 chr15 20550822 20550875 -80829646 + L1PA16 LINE L1 6105 6159 -7 844 238 196 55 chr15 20550937 20551472 -80829049 + L1MC3 LINE L1 4614 5321 -853 2268 91 20 3 chr15 20551472 20551768 -80828753 - AluSq SINE Alu -11 302 2 844 238 196 55 chr15 20551768 20551925 -80828596 + L1MC3 LINE L1 5321 5454 -720 428 230 9 9 chr15 20551925 20552038 -80828483 + L1MC3 LINE L1 5854 5966 -2076 836 255 18 99 chr15 20552042 20552426 -80828095 + L1MC3 LINE L1 6646 6998 -787 261 57 0 0 chr15 20552482 20552517 -80828004 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 418 163 12 12 chr15 20552571 20552657 -80827864 + L1MC3 LINE L1 7497 7582 -203 7677 105 4 1 chr15 20552758 20553856 -80826665 - L1P LINE L1 -3261 2885 1785 4607 150 7 39 chr15 20553850 20555142 -80825379 + L1P3 LINE L1 853 2092 -4369 * 874 142 39 0 chr15 20555152 20555307 -80825214 - L1M2 LINE L1 -821 5479 5319 2005 122 32 131 chr15 20555407 20555962 -80824559 + L1MA2 LINE L1 5265 6304 0 3788 212 102 56 chr15 20555977 20557226 -80823295 + L1MC3 LINE L1 5858 7164 -621 1629 123 3 78 chr15 20557229 20557513 -80823008 - L1PA15 LINE L1 -2 6163 5901 1771 199 14 11 chr15 20557513 20557884 -80822637 + L1P LINE L1 4092 4463 -1683 8498 94 39 20 chr15 20557884 20559035 -80821486 + HSMAR1 DNA Mariner 1 1178 -109 2090 114 0 0 chr15 20559035 20559344 -80821177 + AluSx SINE Alu 1 309 0 8498 94 39 20 chr15 20559344 20559409 -80821112 + HSMAR1 DNA Mariner 1178 1240 -47 9293 207 29 37 chr15 20559510 20562664 -80817857 - L1P3 LINE L1 -3325 3136 5 1252 258 11 28 chr15 20562661 20563014 -80817507 - L1MC3 LINE L1 -931 6854 6508 * 1319 244 113 15 chr15 20563020 20563211 -80817310 - L1MC3 LINE L1 -1418 6367 6196 438 20 0 0 chr15 20563211 20563262 -80817259 + (TAGA)n Simple_repeat Simple_repeat 4 54 0 1319 244 113 15 chr15 20563262 20563538 -80816983 - L1MC3 LINE L1 -1589 6196 5854 2812 251 49 91 chr15 20563538 20564503 -80816018 - L1MC3 LINE L1 -730 5454 4450 1600 89 31 0 chr15 20564503 20564728 -80815793 - L1MA4A LINE L1 -6 6297 6066 2812 251 49 91 chr15 20564728 20565037 -80815484 - L1MC3 LINE L1 -1734 4450 4130 7372 60 14 0 chr15 20565037 20566404 -80814117 + L1PA7 LINE L1 4774 6152 -2 2812 251 49 91 chr15 20566404 20567076 -80813445 - L1MC3 LINE L1 -2054 4130 3638 666 179 50 7 chr15 20567176 20567316 -80813205 + LTR10C LTR ERV1 446 591 0 2247 114 0 0 chr15 20568739 20569038 -80811483 + AluSx SINE Alu 7 305 -7 2445 102 151 5 chr15 20569228 20569619 -80810902 - LTR7 LTR ERV1 -2 448 1 2410 96 48 13 chr15 20569619 20569996 -80810525 - HERVH LTR ERV1 0 7713 7324 1215 163 9 26 chr15 20569996 20570223 -80810298 - HERVH LTR ERV1 -1894 5819 5597 8075 126 1 1 chr15 20570224 20571389 -80809132 - HERVH LTR ERV1 -2567 5146 3994 1552 150 0 4 chr15 20571399 20571645 -80808876 - HERVH LTR ERV1 -3977 3736 3492 1005 120 7 0 chr15 20571635 20571785 -80808736 - HERVH LTR ERV1 -4423 3290 3140 * 14914 110 21 11 chr15 20571779 20574493 -80806028 - HERVH LTR ERV1 -4726 2987 1 2626 90 125 8 chr15 20574495 20574896 -80805625 - LTR7 LTR ERV1 -2 448 1 331 264 39 16 chr15 20575445 20575574 -80804947 - L1MEc LINE L1 -6153 243 112 4315 88 22 0 chr15 20575734 20576361 -80804160 - L1P LINE L1 -1063 5083 4443 5839 34 4 1 chr15 20576461 20577161 -80803360 - L1P LINE L1 -1566 4580 3879 2275 33 3 0 chr15 20577152 20578082 -80802439 + L1PA2 LINE L1 5089 6155 0 * 3356 34 5 0 chr15 20578093 20578477 -80802044 + L1PA4 LINE L1 5770 6155 0 336 292 70 70 chr15 20578722 20579006 -80801515 - HsTC2 DNA Tc2 -198 1700 1241 5138 103 5 1 chr15 20580162 20580824 -80799697 - MER4A LTR ERV1 0 664 1 2811 133 164 30 chr15 20580929 20581470 -80799051 - LTR18B LTR ERVL 0 614 1 2661 246 53 31 chr15 20581619 20582446 -80798075 - L1MDa LINE L1 -3138 3402 2547 2286 73 30 3 chr15 20582446 20582748 -80797773 - AluY SINE Alu -1 310 1 2661 246 53 31 chr15 20582748 20582975 -80797546 - L1MDa LINE L1 -3993 2547 2326 944 201 22 48 chr15 20582985 20583258 -80797263 + L1MCa LINE L1 1955 2220 -4206 983 268 104 19 chr15 20583258 20583575 -80796946 - MLT1E LTR MaLR -249 344 1 571 261 49 0 chr15 20583579 20583721 -80796800 - L1MD3 LINE L1 -282 7713 7565 532 163 0 10 chr15 20583965 20584063 -80796458 - L1MC3 LINE L1 -11 7774 7678 262 277 25 57 chr15 20584168 20584327 -80796194 - L1M4 LINE L1 -2391 3755 3602 3794 234 126 17 chr15 20584354 20585647 -80794874 - L1M4 LINE L1 -1112 5034 3601 382 190 83 33 chr15 20585732 20585833 -80794688 + MLT1E LTR MaLR 281 427 -166 904 199 99 5 chr15 20585891 20586102 -80794419 - MER34 LTR ERV1 -283 259 29 264 270 22 108 chr15 20586138 20586360 -80794161 - MER34-int LTR ERV1 -20 6311 6109 25 51 0 0 chr15 20586679 20586718 -80793803 + AT_rich Low_complexity Low_complexity 1 39 0 33 25 0 0 chr15 20586776 20586816 -80793705 + AT_rich Low_complexity Low_complexity 1 40 0 15285 88 11 2 chr15 20586816 20588953 -80791568 - L1P LINE L1 -818 5336 3177 465 348 103 11 chr15 20590408 20590759 -80789762 + L1M4 LINE L1 4755 5137 -1009 183 296 19 0 chr15 20590860 20590914 -80789607 + MIR SINE MIR 137 191 -71 863 269 83 28 chr15 20591011 20591446 -80789075 - HsTC2 DNA Tc2 -22 1876 1242 2414 73 0 25 chr15 20591446 20591761 -80788760 - AluY SINE Alu -4 307 1 251 354 35 0 chr15 20591777 20591890 -80788631 - HsTC2 DNA Tc2 -1744 154 38 247 241 0 0 chr15 20592135 20592189 -80788332 - MER54A LTR ERVL -834 67 14 252 218 36 0 chr15 20592387 20592442 -80788079 - MER52A LTR ERV1 0 1755 1699 5005 226 78 47 chr15 20592454 20592994 -80787527 - MER52A LTR ERV1 -270 1485 964 180 0 0 0 chr15 20592994 20593014 -80787507 + (CTCTG)n Simple_repeat Simple_repeat 1 20 0 5005 226 78 47 chr15 20593014 20593912 -80786609 - MER52A LTR ERV1 -791 964 1 868 246 104 106 chr15 20594095 20595070 -80785451 + LTR28 LTR ERV1 1 1755 0 656 224 64 4 chr15 20595071 20595336 -80785185 + L1M4 LINE L1 5215 5485 -699 552 223 0 9 chr15 20596836 20596948 -80783573 + FLAM_A SINE Alu 20 130 -12 200 278 0 0 chr15 20597398 20597452 -80783069 + MIR SINE MIR 1 54 -208 213 255 0 0 chr15 20598348 20598399 -80782122 + MIR SINE MIR 24 74 -188 2308 92 0 7 chr15 20598465 20598771 -80781750 - AluSx SINE Alu -8 304 1 1991 132 24 7 chr15 20603541 20603865 -80776656 - AluSx SINE Alu 0 312 1 237 33 0 0 chr15 20604167 20604197 -80776324 + (TG)n Simple_repeat Simple_repeat 2 31 0 785 317 65 18 chr15 20604332 20604729 -80775792 - L2 LINE L2 -71 3242 2827 286 78 20 20 chr15 20604921 20604972 -80775549 + (TAGA)n Simple_repeat Simple_repeat 3 53 0 1663 224 42 8 chr15 20604978 20605335 -80775186 + MLT1A2 LTR MaLR 2 370 -4 476 13 66 0 chr15 20605338 20605414 -80775107 + (TAGA)n Simple_repeat Simple_repeat 2 82 0 657 103 0 0 chr15 20605513 20605600 -80774921 - AluY SINE Alu -20 291 205 3033 44 14 0 chr15 20606437 20606804 -80773717 + LTR10C LTR ERV1 1 372 -219 373 269 86 82 chr15 20606904 20607172 -80773349 + L1M4 LINE L1 4828 5096 -1050 2744 39 39 3 chr15 20607329 20607696 -80772825 + L1PA4 LINE L1 5785 6163 0 327 239 72 43 chr15 20607864 20608002 -80772519 - HsTC2 DNA Tc2 -25 1873 1732 923 155 19 0 chr15 20608002 20608163 -80772358 + L1M2 LINE L1 5509 5672 -619 565 311 75 23 chr15 20608165 20608470 -80772051 - HsTC2 DNA Tc2 -169 1729 1233 245 284 113 32 chr15 20608467 20608609 -80771912 - HsTC2 DNA Tc2 -1744 154 3 * 2431 84 3 0 chr15 20609133 20609441 -80771080 + AluSx SINE Alu 1 309 -3 253 269 0 15 chr15 20609913 20609980 -80770541 - LTR38 LTR ERV1 -362 194 129 1127 235 209 26 chr15 20610637 20611218 -80769303 + L1M4 LINE L1 4591 5301 -845 1606 141 15 19 chr15 20611218 20611488 -80769033 + AluJb SINE Alu 26 294 -18 1127 235 209 26 chr15 20611488 20611548 -80768973 + L1M4 LINE L1 5301 5349 -797 2685 204 79 25 chr15 20611589 20612128 -80768393 + L1MC3 LINE L1 7072 7656 -129 2211 61 0 48 chr15 20612128 20612461 -80768060 + AluY SINE Alu 1 319 0 2685 204 79 25 chr15 20612461 20612590 -80767931 + L1MC3 LINE L1 7656 7777 -8 200 173 0 39 chr15 20612698 20612750 -80767771 + T-rich Low_complexity Low_complexity 2 51 0 535 247 34 14 chr15 20612826 20612972 -80767549 + L1MD3 LINE L1 7565 7713 -282 772 296 71 40 chr15 20612987 20613311 -80767210 + MLT1E LTR MaLR 12 345 -248 1108 157 43 62 chr15 20613311 20613350 -80767171 - L1MCa LINE L1 -4207 2219 2181 2175 119 0 0 chr15 20613350 20613645 -80766876 + AluSx SINE Alu 1 295 -17 1108 157 43 62 chr15 20613645 20613910 -80766611 - L1MCa LINE L1 -4245 2181 1921 * 2864 228 46 27 chr15 20613908 20614043 -80766478 + L1MCa LINE L1 2212 2343 -4083 1513 176 3 44 chr15 20614043 20614361 -80766160 + AluJo SINE Alu 1 305 -7 2864 228 46 27 chr15 20614361 20615412 -80765109 + L1MCa LINE L1 2343 3412 -3014 2994 182 8 45 chr15 20616813 20617459 -80763062 + MER54B LTR ERVL 1 678 -115 337 155 0 52 chr15 20619965 20620023 -80760498 - HERVL74 LTR ERVL -1048 4637 4583 * 1032 148 7 0 chr15 20620005 20620160 -80760361 - HERVL74 LTR ERVL -1612 4073 3918 895 183 7 13 chr15 20620163 20620316 -80760205 - HERVL74 LTR ERVL -2043 3642 3491 2186 225 33 39 chr15 20620317 20620887 -80759634 - HERVL74 LTR ERVL -2353 3332 2766 2496 194 25 15 chr15 20620920 20621440 -80759081 - HERVL74 LTR ERVL -2873 2812 2288 1562 107 60 0 chr15 20621440 20621655 -80758866 - MER30 DNA MER1_type 0 230 3 186 103 0 0 chr15 20621876 20621905 -80758616 + (TC)n Simple_repeat Simple_repeat 2 30 0 1974 181 19 2 chr15 20623250 20623880 -80756641 + MER54B LTR ERVL 1 682 -111 365 267 120 35 chr15 20624092 20624350 -80756171 + L1MEc LINE L1 62 341 -6055 21 57 0 0 chr15 20625198 20625233 -80755288 + AT_rich Low_complexity Low_complexity 1 35 0 8091 29 1 1 chr15 20625240 20626324 -80754197 + L1PA4 LINE L1 5072 6155 0 376 303 88 19 chr15 20626976 20627293 -80753228 + L1M4 LINE L1 4754 5092 -1054 321 327 157 9 chr15 20627339 20627562 -80752959 + MIR SINE MIR 7 262 0 332 240 70 23 chr15 20627601 20627730 -80752791 - HsTC2 DNA Tc2 -23 1875 1741 811 174 15 0 chr15 20627770 20627946 -80752575 + L1M2 LINE L1 5517 5707 -595 2025 135 10 0 chr15 20629210 20629506 -80751015 + AluSg SINE Alu 1 299 -11 1661 193 146 57 chr15 20629634 20630307 -80750214 - LTR48 LTR ERV1 0 644 1 2152 96 7 0 chr15 20630430 20630722 -80749799 + AluY SINE Alu 14 307 -4 23 33 0 0 chr15 20630746 20630776 -80749745 + AT_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr15 20631201 20631223 -80749298 + AT_rich Low_complexity Low_complexity 1 22 0 639 200 8 0 chr15 20631369 20631489 -80749032 - MER70B LTR ERVL -419 159 39 911 198 70 40 chr15 20631528 20631826 -80748695 - L1ME1 LINE L1 -118 6048 5742 2173 238 62 32 chr15 20632048 20632222 -80748299 - L1ME1 LINE L1 -918 5228 5061 405 0 0 0 chr15 20632222 20632267 -80748254 + (TG)n Simple_repeat Simple_repeat 1 45 0 1519 189 18 4 chr15 20632268 20632548 -80747973 - AluJb SINE Alu -28 284 1 2173 238 62 32 chr15 20632548 20633192 -80747329 - L1ME1 LINE L1 -1084 5062 4383 2529 61 3 6 chr15 20634996 20635308 -80745213 - AluY SINE Alu 0 311 1 1862 221 8 3 chr15 20635818 20636180 -80744341 - MER54B LTR ERVL -428 365 2 444 215 136 58 chr15 20636342 20636584 -80743937 - HsTC2 DNA Tc2 -231 1667 1231 283 261 14 0 chr15 20636581 20636650 -80743871 - HsTC2 DNA Tc2 -1747 151 82 * 368 318 13 26 chr15 20637633 20637787 -80742734 - MLT1E LTR MaLR -441 152 1 758 187 43 0 chr15 20637791 20637930 -80742591 - L1MD3 LINE L1 -282 7713 7569 1590 201 0 7 chr15 20637996 20638280 -80742241 + AluJb SINE Alu 1 282 -30 1357 128 0 5 chr15 20638300 20638496 -80742025 - AluSg/x SINE Alu -32 278 84 2671 229 120 91 chr15 20638680 20639264 -80741257 - L1MC3 LINE L1 0 7785 7219 229 292 0 14 chr15 20639264 20639336 -80741185 - MLT1H LTR MaLR -401 148 78 2671 229 120 91 chr15 20639336 20639572 -80740949 - L1MC3 LINE L1 -566 7219 6991 239 0 32 0 chr15 20639572 20639603 -80740918 + (TTTG)n Simple_repeat Simple_repeat 1 32 0 2671 229 120 91 chr15 20639603 20640114 -80740407 - L1MC3 LINE L1 -794 6991 6342 589 287 80 3 chr15 20640163 20640449 -80740072 - L1MC3 LINE L1 -1624 6161 5854 3385 212 45 150 chr15 20640458 20641528 -80738993 - L1MC3 LINE L1 -725 5453 4272 2030 150 0 0 chr15 20641528 20641822 -80738699 - AluSq SINE Alu -19 294 1 3385 212 45 150 chr15 20641822 20641874 -80738647 - L1MC3 LINE L1 -1906 4272 4216 1266 203 0 8 chr15 20641874 20642111 -80738410 - AluJo SINE Alu -77 235 1 3385 212 45 150 chr15 20642111 20642125 -80738396 - L1MC3 LINE L1 -1962 4216 4202 2172 99 0 3 chr15 20642125 20642408 -80738113 - AluSx SINE Alu -20 292 11 3385 212 45 150 chr15 20642408 20643208 -80737313 - L1MC3 LINE L1 -1976 4202 3520 386 228 213 25 chr15 20643208 20643405 -80737116 + MLT1E LTR MaLR 346 622 -2 747 227 50 12 chr15 20643406 20643648 -80736873 + L1MD3 LINE L1 7721 7971 -24 5001 181 20 24 chr15 20643649 20644654 -80735867 - L1MA7 LINE L1 -2 6289 5287 3844 98 8 6 chr15 20644654 20645164 -80735357 - MER9 LTR ERVK 0 511 1 5001 181 20 24 chr15 20645164 20645189 -80735332 - L1MA7 LINE L1 -1004 5287 5263 4200 94 25 4 chr15 20645825 20646377 -80734144 - LTR6A LTR ERV1 0 564 1 3706 226 79 21 chr15 20647414 20648264 -80732257 + MER54A LTR ERVL 3 901 0 1027 247 87 31 chr15 20648562 20649020 -80731501 + HsTC2 DNA Tc2 1216 1875 -23 234 319 21 11 chr15 20649104 20649198 -80731323 - MIR SINE MIR -36 226 132 22 80 0 0 chr15 20649476 20649526 -80730995 + AT_rich Low_complexity Low_complexity 1 50 0 1533 201 3 13 chr15 20651017 20651315 -80729206 + AluJo SINE Alu 1 295 -17 1704 211 28 11 chr15 20651330 20651686 -80728835 - MER47A DNA MER2_type -1 365 4 322 256 12 0 chr15 20652093 20652179 -80728342 - L1MEc LINE L1 -6210 186 100 2330 95 0 3 chr15 20652236 20652531 -80727990 + AluSc SINE Alu 1 294 -15 2495 171 38 71 chr15 20652795 20653093 -80727428 - MER7C DNA MER2_type -2426 602 296 2345 84 3 0 chr15 20653093 20653389 -80727132 + AluSp SINE Alu 1 297 -16 2495 171 38 71 chr15 20653389 20653578 -80726943 - MER7C DNA MER2_type -2732 296 133 1783 156 3 59 chr15 20653578 20653898 -80726623 + AluSx SINE Alu 1 302 -10 2495 171 38 71 chr15 20653898 20654016 -80726505 - MER7C DNA MER2_type -2895 133 13 2054 93 14 4 chr15 20654254 20654533 -80725988 + AluSg SINE Alu 1 282 -28 349 206 113 64 chr15 20654546 20654687 -80725834 - HsTC2 DNA Tc2 -344 1554 1231 2356 78 0 10 chr15 20655680 20655987 -80724534 + AluY SINE Alu 2 305 -6 1941 285 32 22 chr15 20656820 20656902 -80723619 - L1MCa LINE L1 -3014 3412 3332 198 0 0 0 chr15 20656902 20656924 -80723597 + (TA)n Simple_repeat Simple_repeat 2 23 0 2390 54 40 0 chr15 20656925 20657221 -80723300 - AluSg SINE Alu 0 310 3 1941 285 32 22 chr15 20657221 20657589 -80722932 - L1MCa LINE L1 -3094 3332 2969 2892 88 3 0 chr15 20657589 20657943 -80722578 + THE1A LTR MaLR 1 355 0 1941 285 32 22 chr15 20657943 20658310 -80722211 - L1MCa LINE L1 -3457 2969 2584 1111 108 0 7 chr15 20658311 20658459 -80722062 - AluSg/x SINE Alu -94 218 72 441 193 59 8 chr15 20658515 20658634 -80721887 - L1MA8 LINE L1 -4 6287 6163 249 216 0 0 chr15 20658632 20658683 -80721838 - L1ME LINE L1 -706 5740 5690 * 1399 141 49 20 chr15 20658670 20658763 -80721758 - L1MCa LINE L1 -3954 2472 2383 1565 187 18 0 chr15 20658763 20659072 -80721449 - AluSx SINE Alu 0 314 1 1399 141 49 20 chr15 20659072 20659322 -80721199 - L1MCa LINE L1 -4043 2383 2210 362 193 118 8 chr15 20659322 20659421 -80721100 + L1MCa LINE L1 1921 2036 -4390 183 42 0 0 chr15 20659421 20659445 -80721076 + (TG)n Simple_repeat Simple_repeat 2 25 0 362 193 118 8 chr15 20659445 20659464 -80721057 + L1MCa LINE L1 2036 2052 -4374 509 248 165 0 chr15 20659469 20659602 -80720919 - MER41E LTR ERV1 -335 177 23 5565 228 77 43 chr15 20660039 20660196 -80720325 - L1MC3 LINE L1 -6 7779 7629 2086 117 0 3 chr15 20660196 20660513 -80720008 - AluSx SINE Alu 0 316 1 5565 228 77 43 chr15 20660513 20662213 -80718308 - L1MC3 LINE L1 -156 7629 5858 2011 132 13 7 chr15 20662226 20662530 -80717991 - AluSq SINE Alu -7 306 1 1428 251 71 18 chr15 20662531 20663168 -80717353 - L1MC3 LINE L1 -722 5452 4782 1682 230 6 11 chr15 20663168 20663516 -80717005 - MER52A LTR ERV1 0 1755 1410 1073 282 8 56 chr15 20663539 20664151 -80716370 - MER52A LTR ERV1 -570 1185 464 1138 184 41 33 chr15 20664151 20664396 -80716125 - LTR12 LTR ERV1 -251 463 217 48 95 0 0 chr15 20665080 20665164 -80715357 + AT_rich Low_complexity Low_complexity 1 84 0 719 94 0 28 chr15 20666171 20666277 -80714244 - FLAM_C SINE Alu -4 139 37 1312 184 58 41 chr15 20666322 20666664 -80713857 - MLT1B LTR MaLR 0 390 43 1390 205 85 53 chr15 20666665 20666767 -80713754 - MER39 LTR ERV1 0 707 610 2139 112 0 3 chr15 20666767 20667061 -80713460 - AluSq SINE Alu -20 293 1 1390 205 85 53 chr15 20667061 20667439 -80713082 - MER39 LTR ERV1 -97 610 4 2459 54 0 7 chr15 20667719 20668017 -80712504 - AluY SINE Alu -15 296 1 2175 113 7 0 chr15 20668079 20668371 -80712150 - AluSx SINE Alu -18 294 1 2379 85 0 3 chr15 20668376 20668683 -80711838 - AluY SINE Alu -4 307 2 287 313 0 0 chr15 20668719 20668799 -80711722 - L1ME1 LINE L1 -30 6136 6057 10312 198 36 10 chr15 20668800 20670425 -80710096 - MER70B-int LTR ERVL -1326 3697 2008 2342 109 0 0 chr15 20670425 20670729 -80709792 + AluSq SINE Alu 1 304 -9 10312 198 36 10 chr15 20670729 20671128 -80709393 - MER70B-int LTR ERVL -3015 2008 1621 5643 189 51 14 chr15 20671138 20671199 -80709322 - MER70B-int LTR ERVL -3867 1156 1099 1984 125 21 0 chr15 20671199 20671488 -80709033 - AluSg SINE Alu -15 295 1 5643 189 51 14 chr15 20671488 20672541 -80707980 - MER70B-int LTR ERVL -3924 1099 1 2020 225 19 16 chr15 20672545 20673030 -80707491 - MER70B LTR ERVL -2 576 91 797 239 0 6 chr15 20673031 20673190 -80707331 - MER70A LTR ERVL -314 158 1 512 256 211 0 chr15 20673193 20673416 -80707105 - L1ME1 LINE L1 -127 6039 5770 818 132 8 0 chr15 20673431 20673552 -80706969 - AluSp/q SINE Alu -21 292 171 23 33 0 0 chr15 20673558 20673588 -80706933 + AT_rich Low_complexity Low_complexity 1 30 0 773 182 0 198 chr15 20673637 20673715 -80706806 - L1ME1 LINE L1 -493 5671 5572 1903 144 3 33 chr15 20673715 20673850 -80706671 + AluSx SINE Alu 1 138 -174 2145 106 0 14 chr15 20673850 20674133 -80706388 + AluSx SINE Alu 1 279 -33 309 26 0 0 chr15 20674133 20674171 -80706350 + (CA)n Simple_repeat Simple_repeat 1 38 0 1903 144 3 33 chr15 20674171 20674340 -80706181 + AluSx SINE Alu 136 297 -15 773 182 0 198 chr15 20674340 20674463 -80706058 - L1ME1 LINE L1 -592 5572 5559 311 59 0 20 chr15 20674463 20674514 -80706007 + (TG)n Simple_repeat Simple_repeat 1 50 0 773 182 0 198 chr15 20674514 20674728 -80705793 - L1ME1 LINE L1 -605 5559 5285 832 259 55 64 chr15 20674779 20674877 -80705644 - L1ME1 LINE L1 -917 5229 5132 2250 110 3 0 chr15 20674877 20675177 -80705344 - AluSx SINE Alu -11 301 1 832 259 55 64 chr15 20675177 20675533 -80704988 - L1ME1 LINE L1 -1014 5132 4779 203 224 0 20 chr15 20675533 20675582 -80704939 + (TA)n Simple_repeat Simple_repeat 2 49 0 1197 248 48 48 chr15 20675585 20675670 -80704851 - L1ME1 LINE L1 -1330 4816 4732 2198 96 3 0 chr15 20675670 20675976 -80704545 + AluSp SINE Alu 1 307 0 1197 248 48 48 chr15 20675976 20676156 -80704365 - L1ME1 LINE L1 -1414 4732 4553 2262 101 0 7 chr15 20676156 20676452 -80704069 + AluSg SINE Alu 1 294 -16 1197 248 48 48 chr15 20676452 20676684 -80703837 - L1ME1 LINE L1 -1592 4554 4317 2144 110 7 0 chr15 20677712 20678004 -80702517 + AluSx SINE Alu 1 294 -18 453 50 0 0 chr15 20678567 20678627 -80701894 + (CGGGGG)n Simple_repeat Simple_repeat 2 61 0 2057 82 0 94 chr15 20679242 20679584 -80700937 - AluSc SINE Alu 0 309 1 1695 233 22 0 chr15 20679708 20680064 -80700457 - MER54B LTR ERVL -429 364 1 738 230 146 42 chr15 20680198 20680533 -80699988 - HsTC2 DNA Tc2 -122 1776 1231 278 259 0 0 chr15 20680529 20680587 -80699934 - HsTC2 DNA Tc2 -1756 142 85 * 22 0 0 0 chr15 20680598 20680620 -80699901 + AT_rich Low_complexity Low_complexity 1 22 0 2186 83 10 20 chr15 20680667 20680968 -80699553 - AluSq SINE Alu -15 298 1 1164 178 18 4 chr15 20681263 20681488 -80699033 - AluJb SINE Alu -1 311 84 404 211 16 24 chr15 20682612 20682735 -80697786 - L1ME1 LINE L1 -2973 3173 3052 681 219 7 0 chr15 20682768 20682905 -80697616 - L1MD3 LINE L1 -282 7713 7576 1430 213 3 56 chr15 20682989 20683313 -80697208 + AluJb SINE Alu 1 307 -5 2651 221 126 12 chr15 20683409 20683753 -80696768 - L1MC3 LINE L1 -11 7774 7471 2405 71 3 0 chr15 20683753 20684047 -80696474 - AluY SINE Alu -16 295 1 2651 221 126 12 chr15 20684047 20684501 -80696020 - L1MC3 LINE L1 -314 7471 6885 646 193 39 8 chr15 20684506 20684653 -80695868 - MSTC LTR MaLR -244 152 1 439 253 0 108 chr15 20685003 20685078 -80695443 + MER54A LTR ERVL 1 83 -818 1932 129 20 14 chr15 20685078 20685373 -80695148 + AluSx SINE Alu 1 297 -15 439 253 0 108 chr15 20685373 20685491 -80695030 + MER54A LTR ERVL 83 173 -728 233 277 24 24 chr15 20685615 20685698 -80694823 - MIR SINE MIR -39 223 141 2240 118 0 7 chr15 20685861 20686167 -80694354 + AluSx SINE Alu 1 304 -8 243 274 154 30 chr15 20686223 20686457 -80694064 - L1 LINE L1 -1125 5021 4759 3821 135 47 72 chr15 20688053 20688762 -80691759 - LTR8 LTR ERV1 0 691 1 1869 124 11 28 chr15 20688869 20689151 -80691370 + AluSg SINE Alu 1 277 -33 3529 122 16 2 chr15 20689151 20689653 -80690868 + LTR10D LTR ERV1 4 512 -1 3954 96 49 2 chr15 20689948 20690477 -80690044 - MER41A LTR ERV1 0 554 1 28 48 0 0 chr15 20690560 20690602 -80689919 + AT_rich Low_complexity Low_complexity 1 42 0 1751 181 47 0 chr15 20690846 20691189 -80689332 - MER47A DNA MER2_type 0 366 8 771 153 0 0 chr15 20691371 20691482 -80689039 + AluSg/x SINE Alu 192 302 -10 3300 173 22 10 chr15 20691504 20692098 -80688423 - MER7C DNA MER2_type 0 602 2 266 238 38 76 chr15 20692304 20692409 -80688112 - HsTC2 DNA Tc2 -345 1553 1277 257 246 98 0 chr15 20692440 20692501 -80688020 - HsTC2 DNA Tc2 -1747 151 85 331 245 19 9 chr15 20694246 20694352 -80686169 - L1 LINE L1 -3014 3132 3026 35 0 0 0 chr15 20694352 20694387 -80686134 + AT_rich Low_complexity Low_complexity 1 35 0 2104 98 0 7 chr15 20694387 20694682 -80685839 - AluY SINE Alu -18 293 1 2300 110 7 0 chr15 20694686 20694994 -80685527 - AluSq SINE Alu -3 310 1 614 232 40 27 chr15 20695031 20695255 -80685266 - L1 LINE L1 -3138 3008 2782 246 139 0 0 chr15 20695255 20695298 -80685223 - MER49 LTR ERV1 0 923 881 * 4156 159 27 22 chr15 20695294 20695397 -80685124 - MER49 LTR ERV1 -206 717 616 2276 113 0 0 chr15 20695397 20695697 -80684824 - AluSx SINE Alu -12 300 1 4156 159 27 22 chr15 20695697 20696303 -80684218 - MER49 LTR ERV1 -307 616 5 858 246 86 4 chr15 20696308 20696588 -80683933 - L1 LINE L1 -3588 2558 2256 729 203 22 11 chr15 20696591 20696773 -80683748 - L1MA8 LINE L1 -2 6569 6386 1034 141 7 0 chr15 20696773 20696922 -80683599 - AluJb SINE Alu -34 278 129 1797 200 44 69 chr15 20696944 20697729 -80682792 - L1MA8 LINE L1 -192 6379 5576 2553 47 0 10 chr15 20697729 20698026 -80682495 - AluY SINE Alu -17 294 1 1797 200 44 69 chr15 20698026 20698335 -80682186 - L1MA8 LINE L1 -995 5576 2213 402 189 79 0 chr15 20698335 20698462 -80682059 + L1MCa LINE L1 1918 2054 -4372 239 191 0 0 chr15 20698462 20698509 -80682012 + LTR66 LTR ERVL 393 439 -171 548 264 7 0 chr15 20698515 20698663 -80681858 + L1MCa LINE L1 2052 2200 -4226 834 265 118 29 chr15 20698669 20698982 -80681539 - MLT1E LTR MaLR -248 345 5 527 273 7 0 chr15 20698991 20699134 -80681387 - L1MD3 LINE L1 -283 7712 7569 1628 153 3 40 chr15 20699207 20699507 -80681014 + AluJb SINE Alu 1 289 -23 5236 243 57 58 chr15 20699577 20701216 -80679305 - L1MC3 LINE L1 0 7785 6146 1946 136 0 34 chr15 20701216 20701546 -80678975 - AluSx SINE Alu 0 320 1 5236 243 57 58 chr15 20701546 20701835 -80678686 - L1MC3 LINE L1 -1639 6146 5858 660 234 47 0 chr15 20701838 20702059 -80678462 - L1MC3 LINE L1 -720 5454 5225 2417 84 3 0 chr15 20702059 20702358 -80678163 - AluY SINE Alu -11 300 1 2516 67 13 0 chr15 20702645 20702945 -80677576 + AluY SINE Alu 2 305 -6 328 325 26 0 chr15 20703149 20703266 -80677255 + HsTC2 DNA Tc2 35 154 -1744 * 1008 233 89 28 chr15 20703264 20703701 -80676820 + HsTC2 DNA Tc2 1234 1873 -25 257 287 56 9 chr15 20703772 20703880 -80676641 - MIR SINE MIR -31 231 119 723 200 23 0 chr15 20704254 20704384 -80676137 + AluJo SINE Alu 3 135 -177 2429 106 0 0 chr15 20704387 20704698 -80675823 + AluSx SINE Alu 1 311 -1 2260 110 3 0 chr15 20704954 20705253 -80675268 + AluSx SINE Alu 3 302 -10 1933 81 84 0 chr15 20706161 20706280 -80674241 + AluSx SINE Alu 1 109 -203 273 29 0 0 chr15 20706280 20706314 -80674207 + (CA)n Simple_repeat Simple_repeat 2 35 0 1933 81 84 0 chr15 20706314 20706467 -80674054 + AluSx SINE Alu 109 296 -16 39 22 0 0 chr15 20707624 20707670 -80672851 + AT_rich Low_complexity Low_complexity 1 46 0 2173 112 3 10 chr15 20707763 20708075 -80672446 + AluSx SINE Alu 1 310 -2 653 235 56 34 chr15 20708289 20708468 -80672053 + MER58A DNA MER1_type 16 198 -26 231 274 32 32 chr15 20709104 20709199 -80671322 - L1ME LINE L1 -5928 142 48 695 165 0 0 chr15 20709366 20709475 -80671046 - AluSg/x SINE Alu -21 291 183 682 140 0 0 chr15 20709477 20709577 -80670944 - AluJo/FLAM SINE Alu -199 113 14 2121 107 0 31 chr15 20709854 20710144 -80670377 + AluSq SINE Alu 1 281 -32 288 0 0 0 chr15 20710144 20710176 -80670345 + (GA)n Simple_repeat Simple_repeat 1 32 0 22 0 0 0 chr15 20710823 20710845 -80669676 + AT_rich Low_complexity Low_complexity 1 22 0 2064 124 18 72 chr15 20711029 20711100 -80669421 - MER47A DNA MER2_type -1957 366 293 2284 98 3 0 chr15 20711100 20711385 -80669136 + AluSg SINE Alu 1 286 -24 2064 124 18 72 chr15 20711385 20711700 -80668821 - MER47A DNA MER2_type -2030 293 1 1975 153 20 0 chr15 20712282 20712576 -80667945 + AluSx SINE Alu 1 300 -12 1622 148 0 104 chr15 20712581 20712918 -80667603 + AluJb SINE Alu 1 302 -10 231 250 172 39 chr15 20713216 20713370 -80667151 - L1MC/D LINE L1 -2004 5804 5615 3161 146 31 29 chr15 20713370 20713926 -80666595 - MER41D LTR ERV1 0 557 1 231 250 172 39 chr15 20713926 20713975 -80666546 - L1MC/D LINE L1 -2193 5615 5574 381 58 0 0 chr15 20714281 20714333 -80666188 + (TG)n Simple_repeat Simple_repeat 1 52 0 2676 155 19 25 chr15 20714595 20715079 -80665442 + MER31A LTR ERV1 5 485 0 2399 93 0 0 chr15 20715710 20716011 -80664510 - AluSx SINE Alu -11 301 1 431 78 62 0 chr15 20716089 20716153 -80664368 + Alu SINE Alu 5 72 -237 460 111 12 12 chr15 20716573 20716654 -80663867 + L1MB3 LINE L1 6100 6180 -3 2189 119 3 0 chr15 20716676 20716970 -80663551 - AluSg SINE Alu -15 295 1 2363 107 0 0 chr15 20717474 20717782 -80662739 - AluSx SINE Alu -4 308 1 2466 75 0 10 chr15 20717864 20718169 -80662352 - AluY SINE Alu -9 302 1 2343 104 7 0 chr15 20718332 20718631 -80661890 + AluSx SINE Alu 1 301 -11 1163 228 134 37 chr15 20718632 20718959 -80661562 + MER39 LTR ERV1 19 313 -394 2352 99 0 13 chr15 20718959 20719273 -80661248 + AluSg SINE Alu 1 310 0 1163 228 134 37 chr15 20719273 20719407 -80661114 + MER39 LTR ERV1 313 662 -45 1642 177 7 0 chr15 20719481 20719758 -80660763 - AluSx SINE Alu -16 296 18 3577 194 62 90 chr15 20719821 20720001 -80660520 - LTR49-int LTR ERV1 -3587 1349 1165 2247 113 0 0 chr15 20720001 20720301 -80660220 - AluSx SINE Alu -11 301 2 3577 194 62 90 chr15 20720301 20721062 -80659459 - LTR49-int LTR ERV1 -3771 1165 440 1816 113 4 4 chr15 20721062 20721329 -80659192 + AluSx SINE Alu 44 310 0 3577 194 62 90 chr15 20721329 20721474 -80659047 - LTR49-int LTR ERV1 -4496 440 292 2329 109 3 0 chr15 20721491 20721821 -80658700 + AluSx SINE Alu 1 312 0 355 228 51 112 chr15 20721828 20721899 -80658622 - LTR49-int LTR ERV1 -4661 1670 1596 1934 143 0 3 chr15 20721899 20722185 -80658336 + AluJo SINE Alu 1 285 -27 355 228 51 112 chr15 20722185 20722310 -80658211 - LTR49-int LTR ERV1 -4735 1596 1486 317 226 59 39 chr15 20722311 20722413 -80658108 + U13 snRNA snRNA 1 104 0 208 217 14 58 chr15 20722417 20722486 -80658035 + A-rich Low_complexity Low_complexity 5 70 0 392 182 74 74 chr15 20722487 20722608 -80657913 - LTR49-int LTR ERV1 -4836 1495 1375 2541 59 0 3 chr15 20722779 20723083 -80657438 - AluY SINE Alu -8 303 1 848 231 68 57 chr15 20723426 20723839 -80656682 - MER39 LTR ERV1 -27 650 269 385 283 0 0 chr15 20723823 20723929 -80656592 - MER34 LTR ERV1 -428 114 9 * 276 53 0 0 chr15 20723957 20723995 -80656526 + (CA)n Simple_repeat Simple_repeat 2 39 0 927 230 67 60 chr15 20724821 20725037 -80655484 + MLT1E1 LTR MaLR 54 267 -326 1866 79 0 17 chr15 20725037 20725277 -80655244 + AluY SINE Alu 55 290 -21 927 230 67 60 chr15 20725277 20725430 -80655091 + MLT1E1 LTR MaLR 267 417 -176 1727 190 7 3 chr15 20725430 20725730 -80654791 + AluJb SINE Alu 7 307 -5 927 230 67 60 chr15 20725730 20725859 -80654662 + MLT1E1 LTR MaLR 417 544 -49 1622 191 11 4 chr15 20725859 20726136 -80654385 + AluJo SINE Alu 1 279 -33 2210 137 34 0 chr15 20726136 20726487 -80654034 + THE1B LTR MaLR 2 364 0 927 230 67 60 chr15 20726487 20726521 -80654000 + MLT1E1 LTR MaLR 543 585 -8 215 59 0 29 chr15 20726718 20726752 -80653769 + (CAAAAA)n Simple_repeat Simple_repeat 2 34 0 2282 86 3 0 chr15 20726862 20727152 -80653369 + AluSc SINE Alu 1 291 -18 2039 93 117 11 chr15 20727300 20727746 -80652775 - LTR14B LTR ERVK 0 608 1 865 264 117 39 chr15 20727866 20728302 -80652219 + LTR41 LTR ERVL 1 470 -303 233 227 0 53 chr15 20728359 20728434 -80652087 + LTR41 LTR ERVL 693 763 -10 282 261 67 52 chr15 20728753 20728887 -80651634 + ERVL LTR ERVL 351 486 -5278 1481 176 14 21 chr15 20729379 20729668 -80650853 + AluJb SINE Alu 12 298 -14 318 177 0 0 chr15 20729672 20729734 -80650787 - L1 LINE L1 -1676 4470 4409 334 232 21 21 chr15 20729867 20729962 -80650559 + ERVL LTR ERVL 1548 1642 -3843 895 260 92 0 chr15 20730033 20730260 -80650261 + MER82 DNA MER2_type 405 652 -1 4983 73 52 9 chr15 20731038 20731698 -80648823 - LTR12 LTR ERV1 0 688 1 198 0 0 0 chr15 20731975 20731997 -80648524 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 1748 159 3 20 chr15 20732306 20732607 -80647914 + AluJb SINE Alu 1 296 -16 21 0 0 0 chr15 20732673 20732694 -80647827 + AT_rich Low_complexity Low_complexity 1 21 0 2325 112 0 0 chr15 20732927 20733239 -80647282 + AluSx SINE Alu 1 312 0 1881 100 126 0 chr15 20733249 20733520 -80647001 + AluSx SINE Alu 1 305 -7 1228 127 0 0 chr15 20733520 20733686 -80646835 + AluSg/x SINE Alu 134 299 -13 2120 98 0 4 chr15 20733818 20734093 -80646428 + AluSx SINE Alu 30 303 -9 1172 282 59 16 chr15 20734198 20734914 -80645607 - L1MEc LINE L1 -4837 1276 673 5638 117 6 12 chr15 20734915 20735773 -80644748 + L1PA13 LINE L1 5307 6159 -4 544 228 0 8 chr15 20736021 20736148 -80644373 + AluY SINE Alu 180 305 -6 328 325 26 0 chr15 20736353 20736470 -80644051 + HsTC2 DNA Tc2 35 154 -1744 * 962 238 97 25 chr15 20736468 20736901 -80643620 + HsTC2 DNA Tc2 1234 1873 -25 257 287 56 9 chr15 20736972 20737080 -80643441 - MIR SINE MIR -31 231 119 756 166 30 4 chr15 20737658 20737822 -80642699 - MSTA LTR MaLR -208 167 1 2076 130 7 0 chr15 20737922 20738222 -80642299 + AluSc SINE Alu 1 302 -7 209 33 33 0 chr15 20738300 20738330 -80642191 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 837 181 87 0 chr15 20738337 20738486 -80642035 + AluJo SINE Alu 127 288 -24 23 0 0 0 chr15 20738486 20738509 -80642012 + AT_rich Low_complexity Low_complexity 1 23 0 2585 172 59 12 chr15 20738571 20739077 -80641444 - L1MB3 LINE L1 -2 6181 5652 453 206 18 100 chr15 20739077 20739247 -80641274 - AluSg/x SINE Alu -19 290 135 495 175 0 0 chr15 20739658 20739778 -80640743 + G-rich Low_complexity Low_complexity 1 120 0 1209 228 54 33 chr15 20739933 20740032 -80640489 + MER58B DNA MER1_type 1 96 -2324 2375 97 3 0 chr15 20740032 20740332 -80640189 + AluSx SINE Alu 1 301 -11 1209 228 54 33 chr15 20740332 20740566 -80639955 + MER58B DNA MER1_type 96 341 0 1706 174 14 3 chr15 20740589 20740871 -80639650 - AluSx SINE Alu -27 285 1 1898 146 3 3 chr15 20741005 20741299 -80639222 + AluSx SINE Alu 2 295 -17 2235 102 10 3 chr15 20741851 20742144 -80638377 + AluSg SINE Alu 1 295 -15 1200 143 104 17 chr15 20742499 20742729 -80637792 - MSTA LTR MaLR 0 428 179 2183 127 3 0 chr15 20742861 20743161 -80637360 + AluSq SINE Alu 1 301 -12 1665 197 14 57 chr15 20743207 20743277 -80637244 + MER67A LTR ERV1 1 72 -471 2209 110 3 0 chr15 20743277 20743576 -80636945 + AluSq SINE Alu 2 301 -12 1665 197 14 57 chr15 20743576 20743927 -80636594 + MER67A LTR ERV1 72 404 -139 1803 149 6 19 chr15 20743945 20744261 -80636260 - AluSx SINE Alu 0 312 1 453 158 13 0 chr15 20744263 20744339 -80636182 - FLAM_A SINE Alu -34 108 32 868 182 7 7 chr15 20744366 20744520 -80636001 + MER67A LTR ERV1 390 543 0 1584 119 61 61 chr15 20744751 20744897 -80635624 - AluJb SINE Alu -17 295 147 2158 102 3 33 chr15 20744897 20745202 -80635319 - AluSg SINE Alu -12 298 3 1584 119 61 61 chr15 20745202 20745332 -80635189 - AluJb SINE Alu -164 148 19 24 41 0 20 chr15 20745614 20745651 -80634870 + AT_rich Low_complexity Low_complexity 1 38 -10 1476 117 167 8 chr15 20745651 20745908 -80634613 - AluSc SINE Alu -1 298 1 24 41 0 20 chr15 20745908 20745919 -80634602 + AT_rich Low_complexity Low_complexity 38 48 0 831 244 151 26 chr15 20746510 20746855 -80633666 + L1MC4 LINE L1 6493 6880 -1162 1360 196 109 7 chr15 20746903 20747179 -80633342 + AluJo SINE Alu 1 304 -8 358 175 0 0 chr15 20747179 20747236 -80633285 + L1MA5A LINE L1 6043 6099 -198 3323 137 61 4 chr15 20747271 20747826 -80632695 - L1MA5 LINE L1 -319 5981 5395 439 312 12 0 chr15 20747876 20748046 -80632475 + L1MC4 LINE L1 7454 7625 -417 231 36 0 0 chr15 20748355 20748383 -80632138 + (TA)n Simple_repeat Simple_repeat 1 28 0 * 312 27 0 0 chr15 20748382 20748419 -80632102 + (GA)n Simple_repeat Simple_repeat 2 38 0 858 197 98 38 chr15 20748419 20748602 -80631919 - AluJo SINE Alu -34 278 85 1093 181 236 57 chr15 20748724 20748911 -80631610 + LTR48 LTR ERV1 1 153 -634 2240 106 3 3 chr15 20748911 20749213 -80631308 + AluSg SINE Alu 1 302 -8 1093 181 236 57 chr15 20749213 20749428 -80631093 + LTR48 LTR ERV1 153 475 -312 935 239 63 28 chr15 20749428 20749683 -80630838 + LTR48B LTR ERV1 381 644 0 207 309 147 0 chr15 20749735 20749803 -80630718 - L2 LINE L2 -44 3269 3192 2463 85 0 0 chr15 20750002 20750309 -80630212 - AluSg SINE Alu -3 307 1 1630 242 57 11 chr15 20750309 20750763 -80629758 - L1MC3 LINE L1 -426 7359 6885 646 193 39 8 chr15 20750768 20750915 -80629606 - MSTC LTR MaLR -244 152 1 439 253 0 108 chr15 20751265 20751340 -80629181 + MER54A LTR ERVL 1 83 -818 1942 128 20 14 chr15 20751340 20751636 -80628885 + AluSx SINE Alu 1 298 -14 439 253 0 108 chr15 20751636 20751754 -80628767 + MER54A LTR ERVL 83 173 -728 233 277 24 24 chr15 20751878 20751961 -80628560 - MIR SINE MIR -39 223 141 2218 121 0 7 chr15 20752124 20752431 -80628090 + AluSx SINE Alu 1 305 -7 243 274 154 30 chr15 20752487 20752721 -80627800 - L1 LINE L1 -1125 5021 4759 23 33 0 0 chr15 20753288 20753318 -80627203 + AT_rich Low_complexity Low_complexity 1 30 0 483 163 39 28 chr15 20753395 20753573 -80626948 + (TA)n Simple_repeat Simple_repeat 1 180 0 2501 34 7 10 chr15 20753654 20753951 -80626570 + AluY SINE Alu 2 297 -14 2287 116 160 2 chr15 20753951 20754357 -80626164 - MER31A LTR ERV1 -15 470 1 628 195 122 12 chr15 20754885 20755049 -80625472 - MER5A DNA MER1_type 0 189 8 2167 102 0 41 chr15 20756420 20756735 -80623786 + AluSq SINE Alu 1 302 -11 243 271 59 12 chr15 20756740 20756825 -80623696 - MIR SINE MIR -146 116 28 308 294 92 8 chr15 20757152 20757271 -80623250 - L1ME3A LINE L1 -260 5910 5782 2195 124 0 13 chr15 20757394 20757709 -80622812 - AluSx SINE Alu -1 311 1 334 369 0 0 chr15 20757713 20757862 -80622659 - L1ME3A LINE L1 -402 5768 5620 1053 268 119 28 chr15 20757868 20758338 -80622183 + L1ME3A LINE L1 5528 6040 -130 321 26 0 0 chr15 20758380 20758418 -80622103 + (TG)n Simple_repeat Simple_repeat 2 39 0 437 49 16 0 chr15 20758427 20758488 -80622033 - AluY SINE Alu -5 306 245 400 192 51 0 chr15 20758484 20758562 -80621959 - AluSq/x SINE Alu -167 145 64 * 506 278 87 80 chr15 20758574 20759088 -80621433 - LTR48B LTR ERV1 0 633 20 1066 175 10 35 chr15 20759089 20759289 -80621232 - AluJb SINE Alu -115 197 3 861 143 32 0 chr15 20759834 20759960 -80620561 + FLAM_C SINE Alu 1 130 -3 1117 185 138 31 chr15 20760126 20760248 -80620273 - AluJo SINE Alu -31 281 173 2259 69 24 0 chr15 20760248 20760536 -80619985 - AluY SINE Alu -16 295 1 1117 185 138 31 chr15 20760536 20760667 -80619854 - AluJo SINE Alu -139 173 1 33 43 0 0 chr15 20760754 20760801 -80619720 + AT_rich Low_complexity Low_complexity 1 47 0 404 248 64 40 chr15 20760869 20760994 -80619527 - MER94 DNA DNA -5 129 2 287 183 139 52 chr15 20761176 20761228 -80619293 - L1MC4 LINE L1 0 8042 7996 1684 166 0 45 chr15 20761228 20761536 -80618985 + AluJo SINE Alu 4 297 -15 287 183 139 52 chr15 20761536 20761598 -80618923 - L1MC4 LINE L1 -46 7996 7918 1712 201 0 3 chr15 20761626 20761924 -80618597 - AluJo SINE Alu -15 297 1 345 24 0 0 chr15 20761979 20762021 -80618500 + (T)n Simple_repeat Simple_repeat 1 42 0 992 183 17 74 chr15 20763416 20763497 -80617024 - AluSx SINE Alu -95 217 133 2214 84 3 7 chr15 20763497 20763809 -80616712 - AluSx SINE Alu 0 311 1 992 183 17 74 chr15 20763809 20763956 -80616565 - AluSx SINE Alu -179 133 1 1935 228 52 21 chr15 20763962 20764485 -80616036 - MER74B LTR ERVL -82 540 2 2434 170 38 57 chr15 20764488 20764800 -80615721 - L1M3 LINE L1 -560 5623 5307 192 97 0 0 chr15 20764800 20764831 -80615690 + (TATG)n Simple_repeat Simple_repeat 2 32 0 1942 147 7 0 chr15 20764831 20765112 -80615409 - AluSx SINE Alu -29 283 1 2434 170 38 57 chr15 20765112 20765163 -80615358 - L1M3 LINE L1 -875 5308 5258 2018 166 0 0 chr15 20765163 20765470 -80615051 - AluSx SINE Alu -5 307 1 2434 170 38 57 chr15 20765470 20765943 -80614578 - L1M3 LINE L1 -925 5258 4793 240 59 0 0 chr15 20766129 20766163 -80614358 + (TG)n Simple_repeat Simple_repeat 1 34 0 872 196 6 30 chr15 20766185 20766353 -80614168 - MLT2D LTR ERVL -54 360 197 2145 123 20 0 chr15 20766354 20766656 -80613865 - AluSx SINE Alu -4 308 1 12637 184 39 20 chr15 20766657 20767138 -80613383 - ERVL LTR ERVL -303 5461 4991 2147 113 0 3 chr15 20767138 20767457 -80613064 - AluSg SINE Alu 0 310 1 12637 184 39 20 chr15 20767457 20769190 -80611331 - ERVL LTR ERVL -773 4991 3198 2176 135 0 6 chr15 20769190 20769501 -80611020 - AluSx SINE Alu -3 309 1 12637 184 39 20 chr15 20769501 20769626 -80610895 - ERVL LTR ERVL -2566 3198 3077 555 258 67 16 chr15 20769610 20769804 -80610717 - ERVL LTR ERVL -5345 419 216 * 841 107 90 0 chr15 20769806 20769928 -80610593 + AluSq/x SINE Alu 1 133 -179 282 264 86 71 chr15 20769939 20770079 -80610442 - ERVL LTR ERVL -5621 143 2 1918 179 42 32 chr15 20770087 20770490 -80610031 - MLT2D LTR ERVL -7 407 1 955 203 81 0 chr15 20770490 20770687 -80609834 - MER58B DNA MER1_type -29 312 100 216 0 0 0 chr15 20770723 20770747 -80609774 + (A)n Simple_repeat Simple_repeat 1 24 0 874 171 7 13 chr15 20770792 20770944 -80609577 + FAM SINE Alu 20 170 -15 480 270 20 7 chr15 20771489 20771641 -80608880 + MIR SINE MIR 2 155 -107 1042 175 0 0 chr15 20771642 20771808 -80608713 + AluJb SINE Alu 137 302 -10 1607 199 3 27 chr15 20771836 20772137 -80608384 - AluJo SINE Alu -5 307 14 32 26 0 0 chr15 20772156 20772195 -80608326 + AT_rich Low_complexity Low_complexity 1 39 0 214 235 59 0 chr15 20772225 20772276 -80608245 + MIR SINE MIR 184 237 -25 2263 114 3 0 chr15 20772730 20773036 -80607485 + AluSg SINE Alu 1 307 -3 725 35 0 0 chr15 20773328 20773414 -80607107 - L1PA3 LINE L1 0 6155 6070 207 0 0 0 chr15 20773481 20773504 -80607017 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 2167 101 0 11 chr15 20773507 20773793 -80606728 - AluSc SINE Alu -26 283 1 1470 183 101 6 chr15 20773793 20774131 -80606390 - L1MC3 LINE L1 -23 7762 7393 * 3349 166 50 100 chr15 20774128 20774393 -80606128 - L1MB7 LINE L1 0 6184 5907 2452 100 0 0 chr15 20774393 20774704 -80605817 - AluSx SINE Alu -1 311 1 3349 166 50 100 chr15 20774704 20774751 -80605770 - L1MB7 LINE L1 -277 5907 5859 1719 189 0 3 chr15 20774751 20775052 -80605469 + AluJo SINE Alu 2 301 -11 3349 166 50 100 chr15 20775052 20775198 -80605323 - L1MB7 LINE L1 -325 5859 5707 1512 199 46 26 chr15 20775198 20775504 -80605017 - AluJo SINE Alu 0 312 1 3349 166 50 100 chr15 20775504 20775564 -80604957 - L1MB7 LINE L1 -477 5707 5646 2255 95 0 0 chr15 20775564 20775849 -80604672 - AluSg SINE Alu -17 293 9 3349 166 50 100 chr15 20775849 20775923 -80604598 - L1MB7 LINE L1 -538 5646 5570 1742 163 16 10 chr15 20775923 20776230 -80604291 - AluJo SINE Alu -3 309 1 1868 130 13 23 chr15 20776236 20776544 -80603977 - AluSx SINE Alu -7 305 1 3349 166 50 100 chr15 20776544 20776895 -80603626 - L1MB7 LINE L1 -619 5565 5297 2041 146 7 0 chr15 20776895 20777189 -80603332 - AluSx SINE Alu -16 296 1 3349 166 50 100 chr15 20777189 20777418 -80603103 - L1MB7 LINE L1 -887 5297 5058 304 231 27 7 chr15 20777418 20777565 -80602956 + (TA)n Simple_repeat Simple_repeat 2 151 0 273 133 0 0 chr15 20777593 20777638 -80602883 - L1MB7 LINE L1 -1144 5002 4958 29 28 0 0 chr15 20778103 20778139 -80602382 + AT_rich Low_complexity Low_complexity 1 36 0 322 254 97 6 chr15 20778177 20778342 -80602179 + L1MC3 LINE L1 7444 7623 -162 477 276 91 25 chr15 20778409 20778652 -80601869 - MIR SINE MIR -2 260 2 2232 110 3 0 chr15 20778703 20779002 -80601519 - AluSc SINE Alu -9 300 1 329 187 13 27 chr15 20779075 20779150 -80601371 - MER116 DNA Mariner -6 74 1 2429 91 0 0 chr15 20783253 20783550 -80596971 - AluSq SINE Alu -16 297 1 346 356 169 12 chr15 20784241 20784727 -80595794 + L2 LINE L2 2007 2568 -746 1403 278 109 42 chr15 20787106 20787989 -80592532 + L1MC4 LINE L1 7103 8036 -6 314 238 112 93 chr15 20788200 20788242 -80592279 + L1MC/D LINE L1 5437 5477 -2331 2267 95 10 3 chr15 20788242 20788536 -80591985 - AluSx SINE Alu -16 296 1 314 238 112 93 chr15 20788536 20788707 -80591814 + L1MC/D LINE L1 5477 5654 -2154 765 247 12 18 chr15 20789356 20789526 -80590995 + MER58A DNA MER1_type 1 169 -55 1964 144 7 0 chr15 20794108 20794393 -80586128 - AluSg SINE Alu -23 287 1 2083 147 0 3 chr15 20795554 20795861 -80584660 - AluSx SINE Alu -6 306 1 518 300 29 40 chr15 20796407 20796680 -80583841 - L1MC/D LINE L1 -2204 5604 5335 802 112 19 0 chr15 20797857 20797964 -80582557 - BC200 scRNA scRNA -80 120 12 1815 161 0 7 chr15 20798423 20798708 -80581813 + AluSx SINE Alu 11 293 -19 22 0 0 54 chr15 20798748 20798766 -80581755 + AT_rich Low_complexity Low_complexity 1 18 -17 2111 132 6 0 chr15 20798766 20799077 -80581444 + AluSp SINE Alu 1 313 0 22 0 0 54 chr15 20799077 20799095 -80581426 + AT_rich Low_complexity Low_complexity 18 35 0 1707 163 10 24 chr15 20799102 20799397 -80581124 + AluSx SINE Alu 3 293 -19 280 196 103 10 chr15 20799636 20799733 -80580788 + L1MC5 LINE L1 6970 7075 -886 21 57 0 0 chr15 20800052 20800087 -80580434 + AT_rich Low_complexity Low_complexity 1 35 0 1080 234 108 7 chr15 20801188 20801457 -80579064 - AluJo SINE Alu -6 296 1 362 234 54 18 chr15 20801737 20801848 -80578673 + L1MB4 LINE L1 5587 5701 -479 997 248 129 3 chr15 20802017 20802388 -80578133 + L1MB4 LINE L1 5762 6179 -1 1291 216 40 7 chr15 20802467 20802768 -80577753 + AluJo SINE Alu 1 311 -1 1077 238 65 63 chr15 20802768 20803142 -80577379 + L1M4c LINE L1 7 384 -6000 3852 199 74 43 chr15 20803161 20804060 -80576461 + L1M4c LINE L1 920 1790 -4594 1463 205 0 33 chr15 20804060 20804363 -80576158 - AluJo SINE Alu -19 293 1 3852 199 74 43 chr15 20804363 20804520 -80576001 + L1M4c LINE L1 1790 1941 -4443 2322 74 0 3 chr15 20804520 20804805 -80575716 + AluY SINE Alu 1 284 -27 3852 199 74 43 chr15 20804805 20804904 -80575617 + L1M4c LINE L1 1941 2112 -4272 517 265 76 0 chr15 20804915 20805138 -80575383 + L1M4c LINE L1 2580 2819 -3563 362 118 0 5 chr15 20805140 20805205 -80575316 + Alu SINE Alu 1 46 -256 1306 107 0 0 chr15 20805206 20805374 -80575147 + AluSg/x SINE Alu 132 299 -11 871 245 21 93 chr15 20805374 20805741 -80574780 - MLT1A1 LTR MaLR -33 424 1 4768 213 21 77 chr15 20805764 20806038 -80574483 - MLT1A1-int LTR MaLR -20 1715 1427 683 186 59 0 chr15 20806038 20806156 -80574365 + FLAM_A SINE Alu 1 125 -8 4768 213 21 77 chr15 20806156 20807135 -80573386 - MLT1A1-int LTR MaLR -308 1427 532 217 152 22 0 chr15 20807494 20807520 -80573001 + (TAA)n Simple_repeat Simple_repeat 3 32 -17 2195 88 0 11 chr15 20807520 20807805 -80572716 + AluSg SINE Alu 1 282 -28 217 152 22 0 chr15 20807805 20807824 -80572697 + (TAA)n Simple_repeat Simple_repeat 32 49 0 962 146 53 0 chr15 20807829 20807980 -80572541 - FRAM SINE Alu -21 155 1 986 198 53 5 chr15 20807980 20808167 -80572354 - MLT1A1-int LTR MaLR -1192 543 348 321 319 64 29 chr15 20808167 20808371 -80572150 + PABL_B LTR ERV1 1 211 -456 758 207 38 55 chr15 20809462 20809699 -80570822 + PABL_B LTR ERV1 369 601 -66 1992 153 38 3 chr15 20809718 20810059 -80570462 - MLT1A1-int LTR MaLR -1382 353 1 549 197 21 42 chr15 20810059 20810201 -80570320 - MLT1A1 LTR MaLR 0 365 227 2371 110 0 0 chr15 20810226 20810536 -80569985 - AluSg SINE Alu 0 310 1 775 111 0 0 chr15 20810564 20810663 -80569858 + AluJ/FLAM SINE Alu 2 100 -212 2527 60 0 3 chr15 20810695 20810993 -80569528 - AluY SINE Alu -14 297 1 679 228 98 23 chr15 20811058 20811273 -80569248 + PABL_B-int LTR ERV1 201 431 -4505 531 187 123 68 chr15 20811266 20811485 -80569036 + PABL_B-int LTR ERV1 546 776 -4160 * 1267 225 129 42 chr15 20811667 20811876 -80568645 + MER39 LTR ERV1 288 477 -230 1733 160 3 31 chr15 20811876 20812194 -80568327 + AluJb SINE Alu 1 309 -3 1267 225 129 42 chr15 20812194 20812370 -80568151 + MER39 LTR ERV1 477 707 0 327 253 0 0 chr15 20812398 20812477 -80568044 + LTR12-int LTR ERV1 3852 3930 -941 * 1217 184 43 71 chr15 20812451 20812777 -80567744 + LTR12-int LTR ERV1 4565 4881 -55 2203 108 0 0 chr15 20812783 20813078 -80567443 - AluSg SINE Alu -15 295 1 1240 116 0 12 chr15 20813169 20813342 -80567179 - AluSg/x SINE Alu -8 304 134 1872 100 126 0 chr15 20813342 20813613 -80566908 - AluSx SINE Alu -7 305 1 1085 173 42 35 chr15 20813623 20813883 -80566638 - AluSx SINE Alu 0 312 51 1566 118 122 4 chr15 20814688 20814943 -80565578 + LTR12 LTR ERV1 1 285 -429 247 280 13 0 chr15 20814946 20815021 -80565500 + LTR30 LTR ERV1 548 623 -99 656 125 22 125 chr15 20815022 20815158 -80565363 + LTR12 LTR ERV1 359 480 -234 884 206 18 6 chr15 20815318 20815483 -80565038 - AluJb SINE Alu -4 308 142 255 161 0 0 chr15 20815499 20815555 -80564966 + (TCTCTG)n Simple_repeat Simple_repeat 3 58 0 2194 93 38 3 chr15 20815637 20815928 -80564593 + AluSg SINE Alu 1 301 -9 2463 141 43 56 chr15 20816354 20816471 -80564050 + MER31A LTR ERV1 1 118 -367 2261 96 0 7 chr15 20816471 20816784 -80563737 + AluSg SINE Alu 1 310 0 2463 141 43 56 chr15 20816784 20817150 -80563371 + MER31A LTR ERV1 118 478 -7 515 274 20 26 chr15 20817172 20817325 -80563196 + MER31A-int LTR ERV1 15 166 -4770 791 124 20 92 chr15 20817329 20817482 -80563039 - FLAM_C SINE Alu 0 143 2 366 241 71 27 chr15 20817529 20817641 -80562880 + MER31A-int LTR ERV1 172 288 -4648 3135 159 32 32 chr15 20817641 20818206 -80562315 + MER34B LTR ERV1 1 565 0 2074 122 0 17 chr15 20818209 20818535 -80561986 - AluSx SINE Alu 0 312 1 939 232 22 130 chr15 20818615 20818656 -80561865 - MLT1A1 LTR MaLR 0 365 321 2146 123 3 0 chr15 20818656 20818956 -80561565 + AluSx SINE Alu 1 301 -11 939 232 22 130 chr15 20818956 20819323 -80561198 - MLT1A1 LTR MaLR -44 321 1 4781 214 24 76 chr15 20819346 20819620 -80560901 - MLT1A1-int LTR MaLR -20 1715 1428 683 186 59 0 chr15 20819620 20819738 -80560783 + FLAM_A SINE Alu 1 125 -8 4781 214 24 76 chr15 20819738 20820733 -80559788 - MLT1A1-int LTR MaLR -307 1428 512 217 152 22 0 chr15 20821076 20821102 -80559419 + (TAA)n Simple_repeat Simple_repeat 3 32 -17 2182 91 0 11 chr15 20821102 20821387 -80559134 + AluSg SINE Alu 1 282 -28 217 152 22 0 chr15 20821387 20821406 -80559115 + (TAA)n Simple_repeat Simple_repeat 32 49 0 962 146 53 0 chr15 20821411 20821562 -80558959 - FRAM SINE Alu -21 155 1 986 198 53 5 chr15 20821562 20821749 -80558772 - MLT1A1-int LTR MaLR -1192 543 348 321 319 64 29 chr15 20821749 20821953 -80558568 + PABL_B LTR ERV1 1 211 -456 773 203 38 55 chr15 20823041 20823278 -80557243 + PABL_B LTR ERV1 369 601 -66 1992 153 38 3 chr15 20823302 20823643 -80556878 - MLT1A1-int LTR MaLR -1382 353 1 549 197 21 42 chr15 20823643 20823785 -80556736 - MLT1A1 LTR MaLR 0 365 227 2193 112 0 0 chr15 20823833 20824119 -80556402 - AluSg SINE Alu -24 286 1 775 111 0 0 chr15 20824147 20824246 -80556275 + AluJ/FLAM SINE Alu 2 100 -212 2437 67 3 3 chr15 20824278 20824575 -80555946 - AluY SINE Alu -14 297 1 679 228 98 23 chr15 20824640 20824855 -80555666 + MER31A-int LTR ERV1 201 431 -4505 500 192 123 68 chr15 20824848 20825067 -80555454 + MER31A-int LTR ERV1 546 776 -4160 * 1283 223 129 42 chr15 20825249 20825458 -80555063 + MER39 LTR ERV1 288 477 -230 1733 160 3 31 chr15 20825458 20825776 -80554745 + AluJb SINE Alu 1 309 -3 1283 223 129 42 chr15 20825776 20825952 -80554569 + MER39 LTR ERV1 477 707 0 327 253 0 0 chr15 20825980 20826059 -80554462 + LTR48-int LTR ERV1 3852 3930 -941 * 1217 184 43 71 chr15 20826033 20826359 -80554162 + LTR48-int LTR ERV1 4565 4881 -55 2222 108 0 0 chr15 20826365 20826662 -80553859 - AluSg SINE Alu -13 297 1 897 106 0 15 chr15 20826753 20826885 -80553636 - AluSg/x SINE Alu -7 303 174 186 0 28 56 chr15 20828062 20828098 -80552423 + (TA)n Simple_repeat Simple_repeat 2 36 0 1137 112 12 0 chr15 20828101 20828262 -80552259 - AluSg/x SINE Alu -13 297 135 252 0 0 0 chr15 20828262 20828290 -80552231 + (TA)n Simple_repeat Simple_repeat 1 28 0 * 420 20 0 0 chr15 20828289 20828338 -80552183 + (GA)n Simple_repeat Simple_repeat 2 50 0 831 202 98 38 chr15 20828338 20828521 -80552000 - AluJo SINE Alu -34 278 85 1189 178 230 57 chr15 20828643 20828832 -80551689 + LTR48 LTR ERV1 1 156 -631 2269 109 0 0 chr15 20828832 20829134 -80551387 + AluSg SINE Alu 1 302 -8 1189 178 230 57 chr15 20829134 20829349 -80551172 + LTR48 LTR ERV1 156 475 -312 904 247 63 28 chr15 20829349 20829604 -80550917 + LTR48B LTR ERV1 381 644 0 216 309 147 0 chr15 20829656 20829724 -80550797 - L2 LINE L2 -44 3269 3192 2576 39 3 7 chr15 20829923 20830232 -80550289 - AluY SINE Alu -3 308 1 269 210 16 0 chr15 20830384 20830446 -80550075 - LTR30 LTR ERV1 -104 618 556 410 172 49 93 chr15 20830446 20830640 -80549881 - LTR12 LTR ERV1 -425 289 44 241 163 0 0 chr15 20830640 20830683 -80549838 - LTR30 LTR ERV1 -679 43 1 3311 205 35 42 chr15 20830683 20831662 -80548859 + L1MA8 LINE L1 2235 6313 -47 2056 270 45 26 chr15 20831731 20832600 -80547921 + L1MEc LINE L1 2317 3201 -3014 629 206 0 0 chr15 20834325 20834432 -80546089 - FAM SINE Alu -21 164 58 889 77 0 0 chr15 20834480 20834597 -80545924 - AluY SINE Alu 0 311 195 528 159 86 73 chr15 20834691 20834842 -80545679 + HsTC2 DNA Tc2 1238 1566 -332 2409 197 36 60 chr15 20835036 20835174 -80545347 + MER7C DNA MER2_type 3 143 -2885 2353 95 0 0 chr15 20835174 20835469 -80545052 - AluSg SINE Alu -15 295 1 2409 197 36 60 chr15 20835469 20835516 -80545005 + MER7C DNA MER2_type 143 190 -2838 2435 65 0 7 chr15 20835516 20835822 -80544699 - AluY SINE Alu -7 304 1 2409 197 36 60 chr15 20835822 20836249 -80544272 + MER7C DNA MER2_type 190 601 -1 302 333 30 0 chr15 20836560 20836725 -80543796 + L1MEc LINE L1 90 259 -6137 1762 166 14 0 chr15 20837172 20837468 -80543053 + MER47A DNA MER2_type 23 322 -44 311 144 0 178 chr15 20837469 20837559 -80542962 + Tigger5 DNA MER2_type 2248 2323 0 241 289 70 30 chr15 20839968 20840169 -80540352 + L1M4 LINE L1 4889 5097 -1049 191 370 10 10 chr15 20840290 20840390 -80540131 + MIR SINE MIR 141 240 -22 266 315 80 24 chr15 20840443 20840656 -80539865 - HsTC2 DNA Tc2 -20 1878 1654 2435 67 0 10 chr15 20840660 20840958 -80539563 + AluY SINE Alu 6 300 -11 1375 133 0 0 chr15 20840959 20841147 -80539374 + AluSg/x SINE Alu 113 300 -12 504 258 102 27 chr15 20841156 20841381 -80539140 - HsTC2 DNA Tc2 -246 1652 1235 2256 211 33 7 chr15 20841473 20841894 -80538627 - MSTB1 LTR MaLR 0 432 1 1376 200 28 39 chr15 20842034 20842319 -80538202 - AluJo SINE Alu -30 282 1 2054 94 63 23 chr15 20842346 20842645 -80537876 - AluSp SINE Alu -2 311 1 3208 239 97 3 chr15 20842769 20843533 -80536988 - MER54A LTR ERVL -7 894 59 2301 101 3 0 chr15 20844011 20844309 -80536212 - AluSp SINE Alu -14 299 1 2304 95 0 25 chr15 20845087 20845404 -80535117 - AluSc SINE Alu 0 309 1 2104 176 72 17 chr15 20846271 20846675 -80533846 - MSTB LTR MaLR 0 426 1 685 48 0 0 chr15 20846698 20846782 -80533739 - MSTB LTR MaLR -342 84 1 2817 221 12 12 chr15 20847284 20847325 -80533196 + L1MA7 LINE L1 5270 5310 -981 2239 93 27 0 chr15 20847325 20847625 -80532896 + AluSx SINE Alu 1 308 -4 1633 194 11 0 chr15 20847635 20847919 -80532602 + AluJo SINE Alu 1 287 -25 2817 221 12 12 chr15 20847919 20848535 -80531986 + L1MA7 LINE L1 5318 5938 -353 366 342 76 11 chr15 20848539 20848723 -80531798 + MLT1E LTR MaLR 68 263 -330 701 185 15 0 chr15 20848786 20848921 -80531600 - L1MCa LINE L1 -4210 2216 2080 246 226 0 0 chr15 20848966 20849019 -80531502 - L1MCa LINE L1 -4300 2126 2074 233 310 69 45 chr15 20849234 20849524 -80530997 + L2 LINE L2 2914 3210 -62 551 231 111 53 chr15 20850044 20850269 -80530252 + HsTC2 DNA Tc2 1239 1652 -246 488 329 78 13 chr15 20850648 20850879 -80529642 + L1MEc LINE L1 62 307 -6089 216 0 0 0 chr15 20851118 20851142 -80529379 + (CAAA)n Simple_repeat Simple_repeat 2 25 0 1970 141 3 0 chr15 20851215 20851498 -80529023 - AluSg SINE Alu -25 285 2 888 148 8 0 chr15 20851502 20851630 -80528891 - AluSq/x SINE Alu -179 133 5 4315 135 0 5 chr15 20852263 20852892 -80527629 - L1PA15 LINE L1 -7 6158 5533 4202 245 41 38 chr15 20852895 20854242 -80526279 - L1PA13 LINE L1 -5378 1409 1 198 0 0 0 chr15 20855975 20855997 -80524524 + (CAAAA)n Simple_repeat Simple_repeat 3 24 0 383 280 84 84 chr15 20856128 20856374 -80524147 + L1M4 LINE L1 4754 5002 -1144 2000 125 18 0 chr15 20856374 20856653 -80523868 - AluSg SINE Alu -26 284 1 383 280 84 84 chr15 20856653 20856749 -80523772 + L1M4 LINE L1 5001 5096 -1050 358 290 172 11 chr15 20856784 20856970 -80523551 + MIR SINE MIR 7 222 -40 346 168 106 9 chr15 20857032 20857145 -80523376 - HsTC2 DNA Tc2 -16 1882 1759 902 123 71 0 chr15 20857170 20857325 -80523196 + L1M2 LINE L1 5508 5673 -618 744 278 68 23 chr15 20857327 20857636 -80522885 - HsTC2 DNA Tc2 -173 1725 1227 835 224 0 0 chr15 20857998 20858173 -80522348 + AluJb SINE Alu 132 306 0 601 199 72 48 chr15 20859479 20859645 -80520876 + L1MC3 LINE L1 4616 4785 -1361 553 303 116 26 chr15 20859659 20860060 -80520461 + MER52A LTR ERV1 29 643 -635 2225 139 88 25 chr15 20860060 20860456 -80520065 + LTR12 LTR ERV1 43 463 -251 1050 296 6 66 chr15 20860456 20860973 -80519548 + MER52A LTR ERV1 464 949 -806 345 244 22 0 chr15 20860978 20861068 -80519453 + MER52A LTR ERV1 1094 1185 -570 1682 230 6 11 chr15 20861091 20861439 -80519082 + MER52A LTR ERV1 1410 1755 0 1438 252 68 18 chr15 20861439 20862078 -80518443 + L1MC3 LINE L1 4782 5452 -722 2138 133 7 0 chr15 20862079 20862381 -80518140 + AluSx SINE Alu 1 304 -8 5631 230 77 40 chr15 20862394 20864093 -80516428 + L1MC3 LINE L1 5858 7632 -153 2087 117 0 3 chr15 20864093 20864425 -80516096 + AluSx SINE Alu 1 331 0 5631 230 77 40 chr15 20864425 20864579 -80515942 + L1MC3 LINE L1 7632 7779 -6 509 248 165 0 chr15 20865016 20865149 -80515372 + MER41E LTR ERV1 23 177 -335 362 193 118 8 chr15 20865154 20865173 -80515348 - L1MCa LINE L1 -4374 2052 2036 183 42 0 0 chr15 20865173 20865197 -80515324 + (CA)n Simple_repeat Simple_repeat 2 25 0 362 193 118 8 chr15 20865197 20865296 -80515225 - L1MCa LINE L1 -4390 2036 1921 1401 138 45 20 chr15 20865296 20865547 -80514974 + L1MEc LINE L1 2210 2383 -4043 1566 187 18 0 chr15 20865547 20865856 -80514665 + AluSx SINE Alu 1 314 0 1401 138 45 20 chr15 20865856 20865949 -80514572 + L1MEc LINE L1 2383 2472 -3954 249 216 0 0 chr15 20865936 20865987 -80514534 + L1ME LINE L1 5410 5460 -706 * 441 193 59 8 chr15 20865985 20866104 -80514417 + L1MA8 LINE L1 6163 6287 -4 1111 108 0 7 chr15 20866160 20866308 -80514213 + AluSg/x SINE Alu 70 216 -94 1818 279 27 43 chr15 20866309 20866676 -80513845 + L1M4 LINE L1 2304 2675 -3471 2931 82 3 0 chr15 20866676 20867030 -80513491 - THE1A LTR MaLR 0 355 1 1818 279 27 43 chr15 20867030 20867398 -80513123 + L1M4 LINE L1 2675 3027 -3119 2306 62 41 0 chr15 20867398 20867690 -80512831 + AluSg SINE Alu 3 306 -4 1818 279 27 43 chr15 20867690 20867795 -80512726 + L1M4 LINE L1 3027 3132 -3014 2352 84 0 10 chr15 20868629 20868940 -80511581 - AluY SINE Alu -2 309 2 349 206 113 64 chr15 20869933 20870074 -80510447 + HsTC2 DNA Tc2 1231 1554 -344 2292 75 7 0 chr15 20870086 20870366 -80510155 - AluSg SINE Alu -28 282 1 2511 170 38 71 chr15 20870604 20870722 -80509799 + MER7C DNA MER2_type 13 133 -2895 1845 153 0 59 chr15 20870722 20871042 -80509479 - AluSx SINE Alu -11 301 1 2511 170 38 71 chr15 20871042 20871231 -80509290 + MER7C DNA MER2_type 133 327 -2701 2345 84 3 0 chr15 20871231 20871527 -80508994 - AluSp SINE Alu -16 297 1 2511 170 38 71 chr15 20871527 20871825 -80508696 + MER7C DNA MER2_type 327 602 0 2365 95 0 0 chr15 20872089 20872383 -80508138 - AluSc SINE Alu -15 294 1 513 268 14 0 chr15 20872440 20872578 -80507943 + L1MEc LINE L1 100 239 -6157 1704 211 28 11 chr15 20872933 20873289 -80507232 + MER47A DNA MER2_type 4 365 -1 1533 201 3 13 chr15 20873304 20873602 -80506919 - AluJo SINE Alu -17 295 1 22 80 0 0 chr15 20875092 20875142 -80505379 + AT_rich Low_complexity Low_complexity 1 50 0 251 267 61 61 chr15 20875383 20875514 -80505007 + MIR SINE MIR 96 226 -36 1040 244 87 31 chr15 20875589 20876047 -80504474 - HsTC2 DNA Tc2 -23 1875 1216 548 263 10 57 chr15 20877148 20877342 -80503179 + MIR3 SINE MIR 15 199 -9 695 239 184 76 chr15 20878478 20878939 -80501582 + MLT2B1 LTR ERVL 2 512 -8 417 123 99 12 chr15 20879151 20879232 -80501289 - MER20B DNA MER1_type -71 712 625 2847 168 238 18 chr15 20879340 20880053 -80500468 + MER52C LTR ERV1 409 1278 0 1356 204 41 44 chr15 20880231 20880618 -80499903 + L1MC4a LINE L1 5288 5680 -688 208 256 26 64 chr15 20881051 20881129 -80499392 - MER5A DNA MER1_type -6 183 109 1948 129 48 3 chr15 20881653 20881963 -80498558 - L1MA6 LINE L1 0 6300 5977 225 94 0 0 chr15 20881967 20881999 -80498522 + (T)n Simple_repeat Simple_repeat 1 32 0 5626 48 5 1 chr15 20883513 20884166 -80496355 + L1PA5 LINE L1 5500 6154 0 338 285 64 121 chr15 20884865 20885114 -80495407 - L2 LINE L2 -6 3266 3032 283 281 0 0 chr15 20885131 20885195 -80495326 + L2 LINE L2 3201 3264 -8 25 0 0 0 chr15 20885310 20885335 -80495186 + AT_rich Low_complexity Low_complexity 1 25 0 1182 165 89 8 chr15 20885784 20886020 -80494501 - AluJb SINE Alu -18 294 40 756 190 69 6 chr15 20886038 20886212 -80494309 - L1M4 LINE L1 -733 5441 5257 383 257 16 82 chr15 20886223 20886406 -80494115 - L1MA10 LINE L1 -7 6327 6157 398 254 127 5 chr15 20886412 20886609 -80493912 - L1M4 LINE L1 -870 5276 5056 1698 176 28 3 chr15 20887505 20887795 -80492726 - AluJo SINE Alu -15 297 1 21 36 0 0 chr15 20887872 20887900 -80492621 + AT_rich Low_complexity Low_complexity 1 28 0 2307 113 0 0 chr15 20887916 20888217 -80492304 - AluSg SINE Alu -9 301 1 327 268 113 12 chr15 20888248 20888416 -80492105 + L1MC4a LINE L1 5706 5890 -1918 21 36 0 0 chr15 20888617 20888645 -80491876 + AT_rich Low_complexity Low_complexity 1 28 0 484 141 0 81 chr15 20891268 20891367 -80489154 - FLAM_A SINE Alu -12 130 40 1514 193 10 3 chr15 20891485 20891780 -80488741 - AluJo SINE Alu -15 297 1 677 153 85 25 chr15 20892107 20892225 -80488296 + FLAM_C SINE Alu 1 125 -18 839 143 54 0 chr15 20892451 20892598 -80487923 - L1MB7 LINE L1 -334 5850 5696 1231 113 0 0 chr15 20892747 20892907 -80487614 + AluSx SINE Alu 3 162 -150 2070 116 0 7 chr15 20893054 20893339 -80487182 - AluSx SINE Alu -29 283 1 770 202 104 22 chr15 20893349 20893532 -80486989 + Tigger3(Golem) DNA MER2_type 2821 3018 -11 2198 91 0 39 chr15 20893543 20893850 -80486671 - AluSq SINE Alu -18 295 1 786 102 68 0 chr15 20894768 20894886 -80485635 - AluSx SINE Alu -9 303 178 848 117 0 39 chr15 20894886 20895014 -80485507 - AluSx SINE Alu -189 123 1 450 248 44 9 chr15 20895248 20895361 -80485160 + MER106A DNA MER1_type 1 117 -119 1993 115 17 3 chr15 20897508 20897796 -80482725 + AluSq SINE Alu 1 292 -21 1848 122 83 17 chr15 20898884 20899172 -80481349 - AluSp SINE Alu -6 307 1 2054 130 10 0 chr15 20899832 20900132 -80480389 + AluSx SINE Alu 1 303 -9 21 0 0 0 chr15 20900140 20900161 -80480360 + AT_rich Low_complexity Low_complexity 1 21 0 785 285 112 82 chr15 20900631 20901302 -80479219 - MER21B LTR ERV1 -149 714 24 2199 100 0 7 chr15 20901936 20902235 -80478286 + AluSx SINE Alu 3 299 -13 1089 165 0 0 chr15 20902235 20902405 -80478116 + AluSg/x SINE Alu 134 303 -9 26 0 0 0 chr15 20902896 20902922 -80477599 + AT_rich Low_complexity Low_complexity 1 26 0 2117 116 3 0 chr15 20903711 20904005 -80476516 - AluSq SINE Alu -18 295 1 649 259 27 22 chr15 20904389 20904574 -80475947 + MER58A DNA MER1_type 33 218 -6 1943 131 3 3 chr15 20904874 20905165 -80475356 + AluSx SINE Alu 1 291 -21 36 23 0 0 chr15 20906099 20906142 -80474379 + AT_rich Low_complexity Low_complexity 1 43 0 686 96 113 17 chr15 20906198 20906313 -80474208 - MER85 DNA T2_type -13 126 1 501 275 10 28 chr15 20906313 20906500 -80474021 - L1MB7 LINE L1 -3 6181 5994 2159 117 0 0 chr15 20906551 20906849 -80473672 + AluSx SINE Alu 1 298 -14 1533 221 45 40 chr15 20906980 20907406 -80473115 + MLT1C LTR MaLR 40 467 0 1456 228 115 54 chr15 20907410 20907752 -80472769 + L1MEc LINE L1 2146 2466 -3749 2139 103 0 7 chr15 20907752 20908044 -80472477 + AluSg1 SINE Alu 3 292 -17 1456 228 115 54 chr15 20908044 20908197 -80472324 + L1MEc LINE L1 2466 2608 -3607 14331 44 7 2 chr15 20908197 20910750 -80469771 + L1PA5 LINE L1 3598 6154 0 1456 228 115 54 chr15 20910750 20910943 -80469578 + L1MEc LINE L1 2608 2840 -3375 249 314 78 11 chr15 20910958 20911149 -80469372 + L1MB5 LINE L1 8 211 -6331 1328 117 254 0 chr15 20911490 20911730 -80468791 + AluSx SINE Alu 1 301 -1 3920 223 77 26 chr15 20911731 20913166 -80467355 + L1M4 LINE L1 818 2415 -4231 22 35 0 0 chr15 20913403 20913432 -80467089 + AT_rich Low_complexity Low_complexity 1 29 0 4351 231 77 18 chr15 20913765 20915474 -80465047 + L1M4 LINE L1 2404 4217 -2427 887 239 133 0 chr15 20915499 20915808 -80464713 + L1M4 LINE L1 5440 5789 -855 900 188 30 61 chr15 20915814 20915905 -80464616 + L1MC1 LINE L1 6015 6107 -226 1771 159 17 17 chr15 20915905 20916200 -80464321 + AluSx SINE Alu 1 295 -17 900 188 30 61 chr15 20916200 20916305 -80464216 + L1MC1 LINE L1 6107 6205 -128 1227 166 97 62 chr15 20916307 20916596 -80463925 + MLT1B LTR MaLR 92 390 0 2683 252 41 78 chr15 20916693 20917148 -80463373 + L1MB5 LINE L1 353 823 -5719 1945 116 39 11 chr15 20917148 20917432 -80463089 - AluSq SINE Alu -21 292 1 2683 252 41 78 chr15 20917432 20918163 -80462358 + L1MB5 LINE L1 823 1496 -5046 1578 215 69 23 chr15 20918168 20920309 -80460212 + L1MB5 LINE L1 4296 6672 0 2380 229 47 64 chr15 20920309 20921285 -80459236 + L1M4 LINE L1 2684 3642 -3002 333 329 77 41 chr15 20921341 20921587 -80458934 - L1M4 LINE L1 -6275 267 13 * 3259 228 66 48 chr15 20921581 20922708 -80457813 - L1MCb LINE L1 -4759 1805 700 7390 32 16 0 chr15 20922708 20923214 -80457307 - L1PA3 LINE L1 0 6155 5659 180 0 0 0 chr15 20923214 20923234 -80457287 + (TA)n Simple_repeat Simple_repeat 1 20 0 7390 32 16 0 chr15 20923234 20924081 -80456440 - L1PA3 LINE L1 -496 5659 4782 3259 228 66 48 chr15 20924081 20924125 -80456396 - L1MCb LINE L1 -5864 700 658 2284 44 44 0 chr15 20924125 20924430 -80456091 + AluY SINE Alu 1 317 0 3259 228 66 48 chr15 20924430 20925026 -80455495 - L1MCb LINE L1 -5906 658 14 3917 241 69 45 chr15 20925036 20926676 -80453845 - L1M4c LINE L1 -2433 3949 2243 198 26 77 0 chr15 20926676 20926715 -80453806 + (TA)n Simple_repeat Simple_repeat 1 42 0 3917 241 69 45 chr15 20926715 20926891 -80453630 - L1M4c LINE L1 -4139 2243 2073 1877 156 33 3 chr15 20926926 20927291 -80453230 - L1MA9 LINE L1 0 6376 6001 4818 209 55 15 chr15 20927308 20929162 -80451359 - L1MA9 LINE L1 -482 5894 3952 3649 32 60 2 chr15 20929162 20929625 -80450896 - L1PA5 LINE L1 -3 6151 5662 2845 38 4 0 chr15 20929625 20930073 -80450448 - L1PA4 LINE L1 -2 6153 5571 2480 42 3 0 chr15 20930069 20930549 -80449972 + L1PA4 LINE L1 5088 5568 -586 * 6265 222 80 43 chr15 20930540 20932156 -80448365 - L1MA9 LINE L1 -2236 3974 2419 396 0 0 0 chr15 20932156 20932200 -80448321 + (TG)n Simple_repeat Simple_repeat 1 44 0 6265 222 80 43 chr15 20932200 20934028 -80446493 - L1MA9 LINE L1 -3791 2419 729 1948 146 133 21 chr15 20934028 20934413 -80446108 - MSTA LTR MaLR 0 428 1 6265 222 80 43 chr15 20934413 20935170 -80445351 - L1MA9 LINE L1 -5481 729 1 5114 239 102 13 chr15 20935223 20936520 -80444001 - L1M4c LINE L1 -4491 2155 975 279 0 0 0 chr15 20936520 20936551 -80443970 + (TG)n Simple_repeat Simple_repeat 2 32 0 5114 239 102 13 chr15 20936551 20936649 -80443872 - L1M4c LINE L1 -5671 975 887 2284 76 35 0 chr15 20936649 20936938 -80443583 - AluSg SINE Alu -11 299 1 5114 239 102 13 chr15 20936938 20937517 -80443004 - L1M4c LINE L1 -5759 887 13 2344 263 68 26 chr15 20937532 20937980 -80442541 - L1M4 LINE L1 -2291 4666 4238 1920 160 0 0 chr15 20937980 20938273 -80442248 - AluJb SINE Alu -19 293 1 2344 263 68 26 chr15 20938273 20938902 -80441619 - L1M4 LINE L1 -2719 4238 3544 552 15 0 0 chr15 20940357 20940422 -80440099 + (CA)n Simple_repeat Simple_repeat 2 66 0 31 48 0 16 chr15 20940958 20940999 -80439522 + AT_rich Low_complexity Low_complexity 1 42 -20 2506 38 0 0 chr15 20940999 20941291 -80439230 - AluY SINE Alu -19 292 1 31 48 0 16 chr15 20941291 20941312 -80439209 + AT_rich Low_complexity Low_complexity 42 62 0 280 206 76 0 chr15 20941576 20941707 -80438814 + (TA)n Simple_repeat Simple_repeat 2 142 0 497 266 14 0 chr15 20943084 20943227 -80437294 - L1ME3A LINE L1 0 6170 6026 2189 103 0 0 chr15 20944481 20944773 -80435748 + AluSg SINE Alu 1 292 -18 288 0 0 0 chr15 20946465 20946497 -80434024 + (CA)n Simple_repeat Simple_repeat 2 33 0 522 315 101 73 chr15 20946497 20947279 -80433242 + L1M4 LINE L1 2152 2955 -3191 435 249 67 31 chr15 20947332 20947659 -80432862 + L1M4 LINE L1 2946 3282 -2864 613 247 44 6 chr15 20947664 20947846 -80432675 - L1M4 LINE L1 -3435 3522 3334 1129 228 134 39 chr15 20947862 20947942 -80432579 + MSTD LTR MaLR 21 92 -304 2354 57 0 0 chr15 20947942 20948239 -80432282 + AluY SINE Alu 1 297 -14 1129 228 134 39 chr15 20948239 20948502 -80432019 + MSTD LTR MaLR 92 396 0 374 148 0 0 chr15 20948527 20948588 -80431933 - L1M4 LINE L1 -1199 4947 4887 2186 260 56 47 chr15 20949022 20950477 -80430044 - L1M4 LINE L1 -3943 3016 1556 1493 141 5 0 chr15 20950479 20950699 -80429822 - AluSg/x SINE Alu -18 294 74 900 173 0 0 chr15 20950704 20950854 -80429667 - L1M4 LINE L1 -457 5717 5568 198 0 0 0 chr15 20953619 20953641 -80426880 + (A)n Simple_repeat Simple_repeat 1 22 0 3024 96 49 11 chr15 20954761 20955209 -80425312 + MER4C LTR ERV1 1 465 0 22 0 0 0 chr15 20955400 20955422 -80425099 + AT_rich Low_complexity Low_complexity 1 22 0 2185 97 0 7 chr15 20956685 20956985 -80423536 + AluSg SINE Alu 1 298 -12 2616 249 25 18 chr15 20958687 20959565 -80420956 - L1MCb LINE L1 -3012 3552 2669 833 225 55 22 chr15 20959572 20959754 -80420767 - AluJo SINE Alu -10 302 115 594 198 94 19 chr15 20959754 20959968 -80420553 - L1MCb LINE L1 -3952 2612 2415 1347 105 0 5 chr15 20959968 20960158 -80420363 + AluSp SINE Alu 125 313 0 2244 81 0 31 chr15 20960197 20960517 -80420004 - AluY SINE Alu -1 310 1 727 155 13 97 chr15 20960517 20960672 -80419849 - FLAM_C SINE Alu 0 143 2 517 247 37 6 chr15 20960673 20960835 -80419686 - L1MCb LINE L1 -4135 2429 2263 207 0 0 0 chr15 20960853 20960876 -80419645 + (TA)n Simple_repeat Simple_repeat 1 23 0 39541 67 5 5 chr15 20960877 20967010 -80413511 - L1PA5 LINE L1 -14 6140 11 1961 248 49 45 chr15 20967053 20968407 -80412114 - L1MCb LINE L1 -4407 2157 704 6089 116 48 62 chr15 20968867 20970028 -80410493 + pTR5 LTR ERV1 743 2019 -419 369 248 44 44 chr15 20970028 20970141 -80410380 + LTR30 LTR ERV1 544 721 -73 1546 78 5 5 chr15 20970141 20970359 -80410162 + pTR5 LTR ERV1 177 394 -2044 5085 118 25 19 chr15 21047778 21048753 -80331768 + MER11C LTR ERVK 1 1071 0 310 305 121 55 chr15 21052641 21052913 -80327608 - L1M4 LINE L1 -2725 3421 3132 33 109 0 0 chr15 21053551 21053689 -80326832 + AT_rich Low_complexity Low_complexity 1 138 0 223 368 158 18 chr15 21053827 21053998 -80326523 - MIR SINE MIR -13 249 55 276 333 67 8 chr15 21054659 21054779 -80325742 - L3 LINE CR1 -95 1482 1356 2123 166 68 7 chr15 21054844 21055253 -80325268 - Tigger2a DNA MER2_type 0 434 1 2065 95 0 27 chr15 21055775 21056070 -80324451 - AluSc SINE Alu -4 305 19 1282 217 50 7 chr15 21057159 21057440 -80323081 + AluJo SINE Alu 1 293 -19 2163 106 10 0 chr15 21057773 21058065 -80322456 + AluSp SINE Alu 1 295 -18 301 224 0 0 chr15 21063480 21063538 -80316983 + L1MC4 LINE L1 6648 6705 -1337 269 324 52 7 chr15 21064590 21064726 -80315795 - L1ME LINE L1 -395 5775 5634 2186 203 20 0 chr15 21064795 21065204 -80315317 - MER47B DNA MER2_type 0 418 2 516 231 31 7 chr15 21065210 21065372 -80315149 - L1P4 LINE L1 -709 5459 5294 1397 284 122 38 chr15 21065387 21066637 -80313884 - L1ME LINE L1 -958 5188 3835 11135 235 68 33 chr15 21066671 21072261 -80308260 - L1MC1 LINE L1 -45 8135 2393 1228 193 0 0 chr15 21072261 21072479 -80308042 - AluSg/x SINE Alu -8 302 85 541 245 35 8 chr15 21072479 21072648 -80307873 - L1MC1 LINE L1 -4221 2343 2192 2784 221 78 64 chr15 21072681 21074376 -80306145 - L1MC1 LINE L1 -4851 1194 1 235 236 14 101 chr15 21074359 21074453 -80306068 - L1M4 LINE L1 -2295 3851 3773 * 2048 119 0 26 chr15 21074453 21074756 -80305765 + AluSx SINE Alu 1 295 -17 235 236 14 101 chr15 21074756 21074809 -80305712 - L1M4 LINE L1 -2373 3773 3717 414 327 49 27 chr15 21074903 21075126 -80305395 - L1M4 LINE L1 -2576 3570 3343 264 285 83 21 chr15 21075735 21075879 -80304642 - L2 LINE L2 -57 3256 3104 1644 226 48 20 chr15 21076184 21076639 -80303882 + MER110A LTR ERV1 1 468 0 540 327 38 8 chr15 21078754 21079020 -80301501 + MER110A-int LTR ERV1 2090 2363 -4438 5499 273 81 78 chr15 21079230 21082382 -80298139 + MER110A-int LTR ERV1 171 3330 -1317 2926 246 88 39 chr15 21082427 21083420 -80297101 + MER110A-int LTR ERV1 3455 4495 -152 1363 213 106 24 chr15 21083480 21083903 -80296618 + MER110A LTR ERV1 5 462 -6 306 323 60 0 chr15 21084422 21084555 -80295966 + MIR SINE MIR 101 241 -21 200 331 66 33 chr15 21084886 21085067 -80295454 + MIR SINE MIR 62 248 -14 1696 155 37 10 chr15 21085575 21085872 -80294649 + MER2 DNA MER2_type 39 343 -2 255 152 0 0 chr15 21085875 21085921 -80294600 + (CATATA)n Simple_repeat Simple_repeat 2 47 0 430 253 21 0 chr15 21088205 21088300 -80292221 + LTR25 LTR ERV1 260 356 -438 229 270 0 90 chr15 21088303 21088403 -80292118 + MER61E LTR ERV1 99 189 -380 * 244 213 0 49 chr15 21088380 21088441 -80292080 + MER61E LTR ERV1 117 174 -395 1018 128 27 37 chr15 21088482 21088670 -80291851 + MER61E LTR ERV1 341 526 -43 21 0 0 0 chr15 21089372 21089393 -80291128 + AT_rich Low_complexity Low_complexity 1 21 0 195 352 14 14 chr15 21089473 21089544 -80290977 + MIR SINE MIR 9 79 -183 214 258 32 32 chr15 21089594 21089687 -80290834 - MIR SINE MIR -30 232 140 2129 120 0 19 chr15 21089772 21090080 -80290441 - AluSx SINE Alu -10 302 1 524 259 68 5 chr15 21090481 21090701 -80289820 - L1MEc LINE L1 -4138 2258 2025 403 156 0 0 chr15 21090729 21090793 -80289728 + AluSg/x SINE Alu 217 280 -20 441 0 0 0 chr15 21090793 21090842 -80289679 + (TA)n Simple_repeat Simple_repeat 1 49 0 2748 269 138 25 chr15 21090918 21092362 -80288159 + L1ME2 LINE L1 2079 3744 -2471 14170 134 85 11 chr15 21092362 21094889 -80285632 + Tigger2 DNA MER2_type 4 2718 0 2748 269 138 25 chr15 21094889 21095354 -80285167 + L1ME2 LINE L1 3744 4155 -2060 234 172 140 11 chr15 21095390 21095483 -80285038 + L1ME2 LINE L1 4397 4501 -1714 1228 262 149 26 chr15 21095547 21096204 -80284317 + L1ME2 LINE L1 4515 5252 -963 1161 172 13 40 chr15 21096208 21096435 -80284086 + AluJo SINE Alu 87 307 -5 592 164 35 0 chr15 21096438 21096554 -80283967 + L1MB5 LINE L1 5989 6108 -66 233 116 0 23 chr15 21096688 21096731 -80283790 + (GGAAA)n Simple_repeat Simple_repeat 3 44 0 6149 213 46 80 chr15 21096903 21099025 -80281496 + L1MC4a LINE L1 5755 7803 -5 2018 244 148 16 chr15 21099027 21099769 -80280752 + L1ME2 LINE L1 5381 6220 -13 24 0 0 0 chr15 21099835 21099859 -80280662 + AT_rich Low_complexity Low_complexity 1 24 0 261 307 74 48 chr15 21100591 21100900 -80279621 + L1MC/D LINE L1 3508 3824 -2322 701 228 73 6 chr15 21101264 21101528 -80278993 + MER110 LTR ERV1 166 491 0 180 0 0 0 chr15 21101767 21101787 -80278734 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 244 243 27 54 chr15 21101875 21101986 -80278535 + L1MC/D LINE L1 4496 4603 -1543 523 271 92 48 chr15 21102511 21102847 -80277674 + L1MC/D LINE L1 5354 5704 -2104 26 0 0 0 chr15 21103167 21103193 -80277328 + AT_rich Low_complexity Low_complexity 1 26 0 291 114 0 0 chr15 21104405 21104449 -80276072 + (A)n Simple_repeat Simple_repeat 1 44 0 202 371 21 7 chr15 21104764 21104904 -80275617 - L2 LINE L2 -5 3308 3167 261 0 0 0 chr15 21105536 21105565 -80274956 + (CA)n Simple_repeat Simple_repeat 2 30 0 2293 192 52 18 chr15 21106960 21107496 -80273025 + MER54A LTR ERVL 147 901 0 2014 108 3 0 chr15 21107813 21108099 -80272422 + AluSx SINE Alu 2 288 -24 373 115 0 0 chr15 21108115 21108167 -80272354 - MER66B LTR ERV1 -140 346 295 2458 260 99 19 chr15 21108363 21108730 -80271791 - L1MEc LINE L1 -2820 3395 3059 1704 163 0 7 chr15 21108730 21109024 -80271497 - AluJb SINE Alu -20 292 1 2458 260 99 19 chr15 21109024 21109274 -80271247 - L1MEc LINE L1 -3156 3059 2831 270 116 0 0 chr15 21109274 21109317 -80271204 + (TCTG)n Simple_repeat Simple_repeat 2 44 0 2458 260 99 19 chr15 21109317 21110014 -80270507 - L1MEc LINE L1 -3384 2831 2005 1142 188 4 83 chr15 21119094 21119248 -80261273 + MER2 DNA MER2_type 91 215 -130 2217 125 0 0 chr15 21119248 21119560 -80260961 + AluSx SINE Alu 1 312 0 1142 188 4 83 chr15 21119560 21119681 -80260840 + MER2 DNA MER2_type 215 344 -1 6499 55 4 2 chr15 21119832 21120635 -80259886 + L1PA7 LINE L1 5351 6154 0 204 97 0 0 chr15 21121461 21121492 -80259029 + (TA)n Simple_repeat Simple_repeat 2 32 0 24 32 0 0 chr15 21121731 21121762 -80258759 + AT_rich Low_complexity Low_complexity 1 31 0 2063 128 0 0 chr15 21122428 21122726 -80257795 + AluSx SINE Alu 1 298 -14 22 106 0 0 chr15 21124418 21124503 -80256018 + AT_rich Low_complexity Low_complexity 1 85 0 1879 234 80 54 chr15 21125667 21126351 -80254170 + L1MDb LINE L1 663 1364 -5045 1959 141 14 0 chr15 21126389 21126686 -80253835 - AluSg SINE Alu -9 301 1 203 200 0 0 chr15 21127798 21127833 -80252688 + A-rich Low_complexity Low_complexity 1 35 0 283 247 74 0 chr15 21128027 21128108 -80252413 + LTR57-int LTR ERVL 2090 2176 -3167 297 0 0 0 chr15 21150178 21150211 -80230310 + (TG)n Simple_repeat Simple_repeat 1 33 0 297 131 0 0 chr15 21152787 21152848 -80227673 + (TG)n Simple_repeat Simple_repeat 2 62 0 230 284 0 0 chr15 21155479 21155546 -80224975 + (TG)n Simple_repeat Simple_repeat 2 68 0 318 204 0 0 chr15 21160940 21161048 -80219473 + (TG)n Simple_repeat Simple_repeat 1 108 0 243 0 0 0 chr15 21163731 21163758 -80216763 + (TG)n Simple_repeat Simple_repeat 2 28 0 348 64 0 0 chr15 21169066 21169113 -80211408 + (TG)n Simple_repeat Simple_repeat 2 48 0 566 121 9 0 chr15 21171812 21171928 -80208593 + (TG)n Simple_repeat Simple_repeat 2 118 0 2175 237 62 13 chr15 21172597 21173280 -80207241 + L1M3 LINE L1 4536 5251 -895 1024 231 30 41 chr15 21173296 21173564 -80206957 + AluJb SINE Alu 5 269 -43 703 196 0 5 chr15 21173594 21173809 -80206712 + GA-rich Low_complexity Low_complexity 1 213 0 2251 187 22 11 chr15 21173909 21174037 -80206484 + L1M3 LINE L1 5357 5482 -852 2210 91 0 4 chr15 21174037 21174312 -80206209 + AluSq SINE Alu 1 274 -39 2251 187 22 11 chr15 21174312 21174642 -80205879 + L1M3 LINE L1 5482 5820 -514 2507 134 86 32 chr15 21174678 21174877 -80205644 + L1PA15 LINE L1 5219 5406 -760 1753 151 43 0 chr15 21174877 21175176 -80205345 + AluSx SINE Alu 1 312 0 2507 134 86 32 chr15 21175176 21175502 -80205019 + L1PA15 LINE L1 5406 5766 -400 1953 180 46 55 chr15 21175503 21176044 -80204477 - MLT2A2 LTR ERVL 0 554 1 1198 146 3 3 chr15 21176045 21176383 -80204138 + L1PA15 LINE L1 5756 6145 -20 1052 245 104 41 chr15 21176432 21177561 -80202960 + L1M4 LINE L1 1337 2762 -3884 1075 191 0 38 chr15 21177575 21177785 -80202736 + AluJo SINE Alu 84 285 -27 1687 221 98 119 chr15 21177804 21177936 -80202585 + L1M4 LINE L1 2760 2893 -3751 2522 65 0 0 chr15 21177936 21178230 -80202291 + AluY SINE Alu 1 294 -17 1687 221 98 119 chr15 21178230 21179027 -80201494 + L1M4 LINE L1 2893 3774 -2870 456 328 8 0 chr15 21179027 21179152 -80201369 + FLAM_C SINE Alu 1 126 -7 1687 221 98 119 chr15 21179152 21179586 -80200935 + L1M4 LINE L1 3774 4216 -2428 1454 197 0 67 chr15 21179587 21179887 -80200634 + AluJo SINE Alu 2 281 -31 191 35 0 35 chr15 21179891 21179920 -80200601 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 2112 87 72 0 chr15 21180886 21181162 -80199359 - AluSp SINE Alu -17 296 1 22 0 0 0 chr15 21181300 21181322 -80199199 + AT_rich Low_complexity Low_complexity 1 22 0 730 181 0 30 chr15 21181322 21181455 -80199066 + FLAM_A SINE Alu 1 129 -4 63 26 0 0 chr15 21181630 21181707 -80198814 + AT_rich Low_complexity Low_complexity 1 77 0 2070 114 4 0 chr15 21182027 21182307 -80198214 - AluSx SINE Alu -21 291 11 450 0 0 0 chr15 21182576 21182626 -80197895 + (TA)n Simple_repeat Simple_repeat 1 50 0 2461 83 0 16 chr15 21183026 21183339 -80197182 - AluY SINE Alu -3 308 1 915 210 188 15 chr15 21183489 21183761 -80196760 + L1MB7 LINE L1 5582 5900 -284 1768 257 157 15 chr15 21183917 21184769 -80195752 - L1MC4 LINE L1 -3 8039 7067 21 57 0 0 chr15 21185841 21185876 -80194645 + AT_rich Low_complexity Low_complexity 1 35 0 36 62 0 0 chr15 21185998 21186062 -80194459 + AT_rich Low_complexity Low_complexity 1 64 0 232 309 98 4 chr15 21186389 21186625 -80193896 - L1ME LINE L1 -312 5809 5552 24 32 0 0 chr15 21186696 21186727 -80193794 + AT_rich Low_complexity Low_complexity 1 31 0 277 228 18 53 chr15 21186754 21186868 -80193653 - L1ME LINE L1 -883 5420 5311 724 249 41 30 chr15 21187602 21187799 -80192722 + MER58A DNA MER1_type 26 224 0 202 231 88 0 chr15 21188153 21188244 -80192277 + (TAGA)n Simple_repeat Simple_repeat 4 102 0 517 323 25 0 chr15 21189485 21189686 -80190835 + L1ME LINE L1 10 215 -5855 652 250 4 74 chr15 21189699 21189955 -80190566 + L1ME LINE L1 320 557 -5513 415 217 15 152 chr15 21190048 21190246 -80190275 + MER20 DNA MER1_type 44 214 -5 412 254 123 9 chr15 21190253 21190481 -80190040 + L1ME LINE L1 564 817 -5253 1359 173 39 27 chr15 21190527 21190787 -80189734 + AluJo SINE Alu 43 305 -7 586 265 122 67 chr15 21190789 21191503 -80189018 + L1ME LINE L1 857 1609 -4471 1744 117 0 0 chr15 21193458 21193688 -80186833 + AluSg SINE Alu 52 281 -29 2303 257 163 29 chr15 21193712 21194504 -80186017 + L1ME LINE L1 2534 3218 -2862 2462 70 0 3 chr15 21194504 21194806 -80185715 + AluY SINE Alu 1 301 -10 2303 257 163 29 chr15 21194806 21195233 -80185288 + L1ME LINE L1 3218 3586 -2494 1671 143 94 0 chr15 21195233 21195499 -80185022 + AluSq SINE Alu 1 291 -22 2303 257 163 29 chr15 21195499 21196113 -80184408 + L1ME LINE L1 3586 4802 -1278 2070 106 46 13 chr15 21198593 21198896 -80181625 - AluSq SINE Alu 0 313 1 299 231 115 0 chr15 21199183 21199261 -80181260 + MLT1G LTR MaLR 497 583 -7 3868 98 122 5 chr15 21199935 21200525 -80179996 + PABL_A LTR ERV1 1 659 -1 2323 88 0 16 chr15 21202462 21202767 -80177754 - AluSq SINE Alu -13 300 1 229 151 38 0 chr15 21203772 21203825 -80176696 + MER109 Unknown Unknown 936 990 -1442 2324 86 0 0 chr15 21204435 21204726 -80175795 - AluSg SINE Alu -19 291 1 25 31 0 0 chr15 21204777 21204809 -80175712 + AT_rich Low_complexity Low_complexity 1 32 0 479 283 40 35 chr15 21205192 21205390 -80175131 + MER8 DNA MER2_type 1 199 -40 21 36 0 0 chr15 21206248 21206276 -80174245 + AT_rich Low_complexity Low_complexity 1 28 0 201 240 0 0 chr15 21206733 21206808 -80173713 + (TA)n Simple_repeat Simple_repeat 1 75 0 214 402 0 0 chr15 21210661 21210743 -80169778 - L2 LINE L2 -18 3295 3214 22 56 0 0 chr15 21211828 21211864 -80168657 + AT_rich Low_complexity Low_complexity 1 36 0 552 263 111 12 chr15 21212115 21212286 -80168235 + MER5A DNA MER1_type 2 189 0 315 161 0 0 chr15 21212865 21212921 -80167600 + (CA)n Simple_repeat Simple_repeat 2 57 0 1306 153 61 4 chr15 21214150 21214378 -80166143 + AluSg SINE Alu 1 241 -69 332 26 0 0 chr15 21214916 21214954 -80165567 + (CA)n Simple_repeat Simple_repeat 1 38 0 207 0 0 0 chr15 21214953 21214976 -80165545 + (GA)n Simple_repeat Simple_repeat 2 24 0 * 2038 139 14 0 chr15 21215948 21216242 -80164279 - AluSx SINE Alu -12 300 3 1841 108 0 34 chr15 21216332 21216629 -80163892 - AluSx SINE Alu -7 305 19 1338 186 67 22 chr15 21216876 21217145 -80163376 + AluJo SINE Alu 3 283 -29 253 283 22 33 chr15 21217170 21217262 -80163259 - L2 LINE L2 -2 3311 3221 2110 117 0 0 chr15 21218190 21218492 -80162029 + AluSx SINE Alu 1 302 0 2478 68 13 0 chr15 21219045 21219352 -80161169 - AluY SINE Alu 0 311 1 343 159 0 72 chr15 21271088 21271157 -80109364 + MER58A DNA MER1_type 161 224 0 1742 170 11 3 chr15 21271180 21271463 -80109058 - AluSx SINE Alu -27 285 1 1879 146 3 3 chr15 21271597 21271891 -80108630 + AluSx SINE Alu 2 295 -17 2216 102 10 3 chr15 21272443 21272736 -80107785 + AluSg SINE Alu 1 295 -15 2127 148 143 11 chr15 21273091 21273469 -80107052 - MSTA LTR MaLR 0 428 1 2060 130 7 0 chr15 21273569 21273869 -80106652 + AluSc SINE Alu 1 302 -7 209 33 33 0 chr15 21273947 21273977 -80106544 + (CAAAA)n Simple_repeat Simple_repeat 5 35 0 827 181 87 0 chr15 21273984 21274133 -80106388 + AluJo SINE Alu 127 288 -24 23 0 0 0 chr15 21274133 21274156 -80106365 + AT_rich Low_complexity Low_complexity 1 23 0 2674 166 58 42 chr15 21274218 21274721 -80105800 - L1MB3 LINE L1 -1 6182 5668 1885 125 0 54 chr15 21274721 21275034 -80105487 - AluSx SINE Alu -16 296 1 2674 166 58 42 chr15 21275034 21275084 -80105437 - L1MB3 LINE L1 -515 5668 5620 663 126 0 0 chr15 21275093 21275180 -80105341 - AluS SINE Alu -225 88 2 1947 226 52 21 chr15 21275187 21275710 -80104811 - MER74B LTR ERVL -82 540 2 2421 166 43 61 chr15 21275713 21276025 -80104496 - L1MB3 LINE L1 -560 5623 5307 192 97 0 0 chr15 21276025 21276056 -80104465 + (TATG)n Simple_repeat Simple_repeat 2 32 0 2021 142 0 0 chr15 21276056 21276339 -80104182 - AluSx SINE Alu -29 283 1 2421 166 43 61 chr15 21276339 21276390 -80104131 - L1MB3 LINE L1 -875 5308 5258 2018 166 0 0 chr15 21276390 21276697 -80103824 - AluSx SINE Alu -5 307 1 2421 166 43 61 chr15 21276697 21277170 -80103351 - L1MB3 LINE L1 -925 5258 4793 240 59 0 0 chr15 21277356 21277390 -80103131 + (TG)n Simple_repeat Simple_repeat 1 34 0 872 196 6 30 chr15 21277412 21277580 -80102941 - MLT2D LTR ERVL -54 360 197 2189 122 16 0 chr15 21277581 21277884 -80102637 - AluSx SINE Alu -4 308 1 12706 182 39 20 chr15 21277885 21278366 -80102155 - ERVL LTR ERVL -303 5461 4991 2147 113 0 3 chr15 21278366 21278685 -80101836 - AluSg SINE Alu 0 310 1 12706 182 39 20 chr15 21278685 21280418 -80100103 - ERVL LTR ERVL -773 4991 3198 2160 138 0 6 chr15 21280418 21280729 -80099792 - AluSx SINE Alu -3 309 1 12706 182 39 20 chr15 21280729 21280854 -80099667 - ERVL LTR ERVL -2566 3198 3077 555 258 67 16 chr15 21280838 21281032 -80099489 - ERVL LTR ERVL -5345 419 216 * 841 107 90 0 chr15 21281034 21281156 -80099365 + AluSq/x SINE Alu 1 133 -179 282 264 86 71 chr15 21281167 21281307 -80099214 - ERVL LTR ERVL -5621 143 2 1918 179 42 32 chr15 21281315 21281718 -80098803 - MLT2D LTR ERVL -7 407 1 955 203 81 0 chr15 21281718 21281915 -80098606 - MER58B DNA MER1_type -29 312 100 216 0 0 0 chr15 21281951 21281975 -80098546 + (A)n Simple_repeat Simple_repeat 1 24 0 874 171 7 13 chr15 21282020 21282172 -80098349 + FAM SINE Alu 20 170 -15 480 270 20 7 chr15 21282716 21282868 -80097653 + MIR SINE MIR 2 155 -107 1042 175 0 0 chr15 21282869 21283035 -80097486 + AluJb SINE Alu 137 302 -10 1607 199 3 27 chr15 21283063 21283364 -80097157 - AluJo SINE Alu -5 307 14 32 26 0 0 chr15 21283383 21283422 -80097099 + AT_rich Low_complexity Low_complexity 1 39 0 214 235 59 0 chr15 21283452 21283503 -80097018 + MIR SINE MIR 184 237 -25 2263 114 3 0 chr15 21283957 21284263 -80096258 + AluSg SINE Alu 1 307 -3 725 35 0 0 chr15 21284555 21284641 -80095880 - L1PA3 LINE L1 0 6155 6070 207 0 0 0 chr15 21284708 21284731 -80095790 + (TTTTA)n Simple_repeat Simple_repeat 3 25 0 2180 98 0 11 chr15 21284734 21285020 -80095501 - AluSc SINE Alu -26 283 1 1470 183 101 6 chr15 21285020 21285358 -80095163 - L1MC3 LINE L1 -23 7762 7393 * 3379 166 50 99 chr15 21285355 21285619 -80094902 - L1MB7 LINE L1 0 6184 5909 2444 100 0 0 chr15 21285619 21285929 -80094592 - AluSx SINE Alu -2 310 1 3379 166 50 99 chr15 21285929 21285976 -80094545 - L1MB7 LINE L1 -275 5909 5861 1719 189 0 3 chr15 21285976 21286277 -80094244 + AluJo SINE Alu 2 301 -11 3379 166 50 99 chr15 21286277 21286423 -80094098 - L1MB7 LINE L1 -323 5861 5709 1512 199 46 26 chr15 21286423 21286729 -80093792 - AluJo SINE Alu 0 312 1 3379 166 50 99 chr15 21286729 21286789 -80093732 - L1MB7 LINE L1 -475 5709 5648 2255 95 0 0 chr15 21286789 21287074 -80093447 - AluSg SINE Alu -17 293 9 3379 166 50 99 chr15 21287074 21287148 -80093373 - L1MB7 LINE L1 -536 5648 5572 1790 156 16 10 chr15 21287148 21287455 -80093066 - AluJo SINE Alu -3 309 1 1912 129 10 23 chr15 21287461 21287770 -80092751 - AluSx SINE Alu -7 305 1 3379 166 50 99 chr15 21287770 21288121 -80092400 - L1MB7 LINE L1 -617 5567 5297 2041 146 7 0 chr15 21288121 21288415 -80092106 - AluSx SINE Alu -16 296 1 3379 166 50 99 chr15 21288415 21288644 -80091877 - L1MB7 LINE L1 -887 5297 5058 304 231 27 7 chr15 21288644 21288791 -80091730 + (TA)n Simple_repeat Simple_repeat 2 151 0 273 133 0 0 chr15 21288819 21288864 -80091657 - L1MB7 LINE L1 -1144 5002 4958 29 28 0 0 chr15 21289329 21289365 -80091156 + AT_rich Low_complexity Low_complexity 1 36 0 322 254 97 6 chr15 21289403 21289568 -80090953 + L1MC3 LINE L1 7444 7623 -162 477 276 91 25 chr15 21289635 21289878 -80090643 - MIR SINE MIR -2 260 2 2232 110 3 0 chr15 21289929 21290228 -80090293 - AluSc SINE Alu -9 300 1 329 187 13 27 chr15 21290301 21290376 -80090145 - MER116 DNA Mariner -6 74 1 562 127 0 64 chr15 21295102 21295212 -80085309 - FLAM_A SINE Alu 0 142 40 1514 193 10 3 chr15 21295330 21295625 -80084896 - AluJo SINE Alu -15 297 1 677 153 85 25 chr15 21295952 21296070 -80084451 + FLAM_C SINE Alu 1 125 -18 839 143 54 0 chr15 21296296 21296443 -80084078 - L1MB7 LINE L1 -334 5850 5696 1423 109 0 0 chr15 21296592 21296776 -80083745 + AluSx SINE Alu 3 186 -126 249 250 250 9 chr15 21296799 21296911 -80083610 - L1MB7 LINE L1 -526 5640 5502 1219 157 89 8 chr15 21296953 21297189 -80083332 - AluJb SINE Alu -18 294 40 756 190 69 6 chr15 21297207 21297381 -80083140 - L1MB7 LINE L1 -733 5441 5257 383 257 16 82 chr15 21297392 21297575 -80082946 - L1MA10 LINE L1 -7 6327 6157 398 254 127 5 chr15 21297581 21297778 -80082743 - L1MB7 LINE L1 -870 5276 5056 21 36 0 0 chr15 21299513 21299541 -80080980 + AT_rich Low_complexity Low_complexity 1 28 0 327 268 113 12 chr15 21299743 21299911 -80080610 - L1MC4a LINE L1 -1918 5890 5706 2285 116 0 0 chr15 21299942 21300243 -80080278 + AluSg SINE Alu 1 301 -9 21 36 0 0 chr15 21300259 21300287 -80080234 + AT_rich Low_complexity Low_complexity 1 28 0 1728 169 28 3 chr15 21300364 21300654 -80079867 + AluJo SINE Alu 1 297 -15 1861 118 83 17 chr15 21300917 21301205 -80079316 - AluSp SINE Alu -6 307 1 2068 127 10 0 chr15 21301863 21302163 -80078358 + AluSx SINE Alu 1 303 -9 21 0 0 0 chr15 21302171 21302192 -80078329 + AT_rich Low_complexity Low_complexity 1 21 0 902 275 112 83 chr15 21302661 21303333 -80077188 - MER21B LTR ERV1 -149 714 24 2245 100 0 7 chr15 21303967 21304266 -80076255 + AluSx SINE Alu 3 299 -13 1104 165 0 0 chr15 21304266 21304436 -80076085 + AluSg/x SINE Alu 132 301 -9 26 0 0 0 chr15 21304927 21304953 -80075568 + AT_rich Low_complexity Low_complexity 1 26 0 2162 116 3 0 chr15 21305742 21306036 -80074485 - AluSq SINE Alu -18 295 1 656 259 27 22 chr15 21306420 21306605 -80073916 + MER58A DNA MER1_type 33 218 -6 427 115 0 0 chr15 21306906 21306967 -80073554 + AluS SINE Alu 2 62 -256 1040 227 34 0 chr15 21507933 21508171 -79872350 + L1MA7 LINE L1 6043 6288 -3 2122 113 0 0 chr15 21508201 21508534 -79871987 + AluY SINE Alu 1 333 0 1156 273 50 34 chr15 21510538 21510978 -79869543 + L1MD2 LINE L1 17 463 -6077 3102 261 47 30 chr15 21511013 21511516 -79869005 + L1MD2 LINE L1 2998 3491 -3049 1839 166 3 0 chr15 21511516 21511833 -79868688 - AluSx SINE Alu 0 312 1 3102 261 47 30 chr15 21511833 21512511 -79868010 + L1MD2 LINE L1 3491 4200 -2340 1407 157 18 18 chr15 21512616 21512845 -79867676 - Tigger4(Zombi) DNA MER2_type -2502 229 1 4562 233 58 61 chr15 21512855 21513438 -79867083 - L1MC4a LINE L1 -58 7750 7167 2195 119 0 0 chr15 21513438 21513731 -79866790 + AluSg SINE Alu 3 295 -15 4562 233 58 61 chr15 21513731 21514636 -79865885 - L1MC4a LINE L1 -641 7167 6267 393 313 105 35 chr15 21514791 21515133 -79865388 - MLT1J1 LTR MaLR -61 385 20 538 293 175 17 chr15 21516264 21516561 -79863960 + L2 LINE L2 2967 3310 -3 1574 6 0 0 chr15 21516827 21516997 -79863524 + AluY SINE Alu 134 303 -8 518 382 13 9 chr15 21517262 21517490 -79863031 + MIR SINE MIR 3 231 -31 225 83 0 0 chr15 21517609 21517645 -79862876 + (TC)n Simple_repeat Simple_repeat 2 37 0 1239 134 3 0 chr15 21518538 21518897 -79861624 + (TGGA)n Simple_repeat Simple_repeat 1 360 0 585 179 0 11 chr15 21519035 21519130 -79861391 + AluJo/FLAM SINE Alu 32 125 -187 346 62 0 0 chr15 21519130 21519178 -79861343 - AluSc SINE Alu -5 294 247 4178 202 78 33 chr15 21519313 21519367 -79861154 + L1MD2 LINE L1 5196 5246 -1507 2339 57 3 3 chr15 21519367 21519683 -79860838 - AluY SINE Alu 0 316 1 4178 202 78 33 chr15 21519683 21521100 -79859421 + L1MD2 LINE L1 5246 6743 -10 2120 163 98 28 chr15 21521117 21521517 -79859004 + MSTA LTR MaLR 1 428 0 2312 102 0 0 chr15 21521663 21521956 -79858565 + AluSx SINE Alu 1 293 -19 188 246 98 16 chr15 21522972 21523033 -79857488 - MIR SINE MIR -147 115 50 2408 88 0 0 chr15 21523161 21523467 -79857054 + AluSg SINE Alu 1 306 -4 1530 152 4 8 chr15 21524519 21524783 -79855738 + AluJo SINE Alu 41 303 -9 342 0 0 0 chr15 21525305 21525343 -79855178 + (CA)n Simple_repeat Simple_repeat 2 39 0 189 118 0 59 chr15 21525360 21525394 -79855127 - MIR SINE MIR -115 147 116 615 153 0 108 chr15 21526550 21526707 -79853814 + L1MA4 LINE L1 6155 6294 -6 220 162 0 0 chr15 21526880 21526917 -79853604 - L2 LINE L2 0 3272 3236 2002 115 28 0 chr15 21528006 21528292 -79852229 + AluSq SINE Alu 1 294 -19 222 37 0 0 chr15 21528744 21528771 -79851750 + (CA)n Simple_repeat Simple_repeat 2 28 0 23 0 0 0 chr15 21530110 21530133 -79850388 + AT_rich Low_complexity Low_complexity 1 23 0 2328 184 28 23 chr15 21530133 21530417 -79850104 - L1MB3 LINE L1 -3 6180 5892 1929 141 3 26 chr15 21530417 21530721 -79849800 - AluJo SINE Alu -14 298 2 2328 184 28 23 chr15 21530721 21530909 -79849612 - L1MB3 LINE L1 -291 5892 5706 555 239 18 18 chr15 21531009 21531122 -79849399 - FRAM SINE Alu -63 113 1 3628 224 38 32 chr15 21531124 21531292 -79849229 - L1MB3 LINE L1 -959 5187 5021 2312 108 0 3 chr15 21531292 21531597 -79848924 + AluSp SINE Alu 3 306 -7 3628 224 38 32 chr15 21531597 21532475 -79848046 - L1MB3 LINE L1 -1125 5021 4135 308 269 13 13 chr15 21534947 21535025 -79845496 - MIR SINE MIR -122 140 63 1288 263 78 21 chr15 21535259 21535685 -79844836 + L1ME2 LINE L1 19 468 -5958 679 160 0 0 chr15 21535688 21535788 -79844733 + FLAM_A SINE Alu 2 101 -41 24 0 0 0 chr15 21535813 21535837 -79844684 + AT_rich Low_complexity Low_complexity 1 24 0 4488 207 71 19 chr15 21535837 21537484 -79843037 + L1MCb LINE L1 404 2140 -4424 249 341 24 16 chr15 21537970 21538096 -79842425 - MIR SINE MIR 0 262 136 26 0 0 0 chr15 21540681 21540707 -79839814 + AT_rich Low_complexity Low_complexity 1 26 0 1784 257 66 10 chr15 21540909 21541515 -79839006 + L1ME2 LINE L1 781 1420 -5187 * 6697 243 67 29 chr15 21541487 21542493 -79838028 + L1ME2 LINE L1 3176 4142 -2304 2508 60 3 0 chr15 21542493 21542795 -79837726 + AluY SINE Alu 1 303 -8 6697 243 67 29 chr15 21542795 21544526 -79835995 + L1ME2 LINE L1 4142 6018 -428 1269 218 7 41 chr15 21544560 21544854 -79835667 - MLT1A1 LTR MaLR -20 345 62 1036 214 62 14 chr15 21544854 21545175 -79835346 - MSTD LTR MaLR -2 394 1 6169 233 98 18 chr15 21545183 21546770 -79833751 - MSTD-int LTR MaLR -8 1727 13 980 202 177 61 chr15 21546790 21547117 -79833404 - MLT1A1 LTR MaLR 0 365 1 351 153 51 0 chr15 21547118 21547177 -79833344 - MLT1A1 LTR MaLR -307 67 6 785 242 71 76 chr15 21547178 21547571 -79832950 + L1ME2 LINE L1 6020 6410 -34 1175 203 0 0 chr15 21547571 21547788 -79832733 + L1PA16 LINE L1 5950 6166 0 189 175 0 0 chr15 21548463 21548503 -79832018 + (TTCA)n Simple_repeat Simple_repeat 1 40 0 214 391 29 10 chr15 21549036 21549243 -79831278 - L2 LINE L2 -653 2661 2451 1449 162 26 0 chr15 21549588 21549816 -79830705 - MER46A DNA MER2_type -1 235 2 244 323 75 25 chr15 21550257 21550418 -79830103 - L2 LINE L2 -190 3082 2914 511 288 50 40 chr15 21550447 21550645 -79829876 + MIR SINE MIR 14 213 -49 288 296 10 10 chr15 21550781 21550879 -79829642 - L1ME1 LINE L1 -6 6160 6063 425 211 98 16 chr15 21550879 21551002 -79829519 + MSTB LTR MaLR 1 133 -293 1466 172 51 65 chr15 21551113 21551398 -79829123 + MSTB LTR MaLR 74 355 -71 2372 88 13 0 chr15 21551398 21551705 -79828816 - AluY SINE Alu 0 311 1 1466 172 51 65 chr15 21551705 21551773 -79828748 + MSTB LTR MaLR 355 422 -4 2488 206 80 7 chr15 21551777 21552138 -79828383 - L1ME1 LINE L1 -99 6067 5734 2047 94 0 0 chr15 21552138 21552424 -79828097 - AluSq SINE Alu 0 313 28 2488 206 80 7 chr15 21552424 21552773 -79827748 - L1ME1 LINE L1 -432 5734 5184 871 181 0 0 chr15 21554070 21554203 -79826318 - FLAM_C SINE Alu 0 133 1 191 296 131 34 chr15 21554244 21554450 -79826071 - L2 LINE L2 -618 2696 2471 440 327 12 6 chr15 21556012 21556177 -79824344 + MIR SINE MIR 78 243 -19 1857 126 159 73 chr15 21556184 21556556 -79823965 - MER4A LTR ERV1 0 664 261 632 130 0 20 chr15 21556556 21556656 -79823865 - MER4A LTR ERV1 -566 98 1 216 313 0 30 chr15 21558674 21558840 -79821681 + (CAGCC)n Simple_repeat Simple_repeat 1 161 0 2315 71 3 3 chr15 21560082 21560398 -79820123 - AluSp SINE Alu 0 316 1 213 319 14 0 chr15 21561062 21561131 -79819390 + L2 LINE L2 3200 3269 -3 3412 66 2 18 chr15 21561772 21562227 -79818294 + LTR7 LTR ERV1 1 448 -2 2985 135 74 0 chr15 21563064 21563576 -79816945 + MER34C LTR ERV1 36 585 0 209 326 67 44 chr15 21564530 21564665 -79815856 - MIR3 SINE MIR -56 152 15 4125 163 27 14 chr15 21566156 21566869 -79813652 + MER72 LTR ERV1 1 722 0 3815 183 20 11 chr15 21567276 21567991 -79812530 + MER72 LTR ERV1 2 722 0 246 231 0 0 chr15 21569687 21569752 -79810769 + GA-rich Low_complexity Low_complexity 2 66 0 931 124 0 15 chr15 21571031 21571168 -79809353 + AluJo SINE Alu 1 135 -177 1576 195 13 23 chr15 21571168 21571476 -79809045 + AluJo SINE Alu 1 305 -7 255 306 108 14 chr15 21571995 21572217 -79808304 - LTR16C LTR ERVL -12 479 237 3384 178 30 10 chr15 21572225 21572831 -79807690 + Tigger1 DNA MER2_type 1 618 -1800 258 294 24 0 chr15 21573759 21573844 -79806677 - L2 LINE L2 0 3313 3227 28 95 0 0 chr15 21574002 21574086 -79806435 + AT_rich Low_complexity Low_complexity 1 84 0 277 263 53 35 chr15 21574580 21574694 -79805827 - MIR3 SINE MIR -51 157 42 1551 158 50 36 chr15 21575309 21575587 -79804934 - AluJo SINE Alu -21 291 10 2171 170 48 18 chr15 21576933 21577328 -79803193 - MLT2D LTR ERVL -7 407 1 435 241 0 0 chr15 21578618 21578780 -79801741 + CT-rich Low_complexity Low_complexity 1 162 0 1704 175 21 126 chr15 21581248 21581780 -79798741 + MER31A LTR ERV1 1 476 -9 258 143 0 0 chr15 21581803 21581852 -79798669 + (CA)n Simple_repeat Simple_repeat 2 50 0 210 303 219 0 chr15 21582554 21582732 -79797789 + L2 LINE L2 3006 3222 -91 2281 106 3 0 chr15 21582757 21583156 -79797365 - AluSx SINE Alu 0 400 1 386 121 15 0 chr15 21584003 21584069 -79796452 + GA-rich Low_complexity Low_complexity 3 69 0 458 236 51 76 chr15 21584603 21584931 -79795590 - MER34 LTR ERV1 0 750 365 375 253 70 13 chr15 21584918 21585076 -79795445 - LTR48B LTR ERV1 -354 290 124 * 227 247 13 26 chr15 21585058 21585135 -79795386 - MER34C LTR ERV1 -449 136 61 * 815 157 144 0 chr15 21586229 21586382 -79794139 + AluJb SINE Alu 133 307 -5 195 69 0 0 chr15 21587651 21587680 -79792841 + (GA)n Simple_repeat Simple_repeat 1 29 0 242 338 35 14 chr15 21587792 21587934 -79792587 - MIR SINE MIR -1 261 117 295 303 110 39 chr15 21589085 21589240 -79791281 - MIR SINE MIR -86 176 11 869 212 0 0 chr15 21589421 21589600 -79790921 - MER5A DNA MER1_type -4 185 7 229 235 0 0 chr15 21591537 21591596 -79788925 - MIR SINE MIR -65 143 94 1006 133 24 229 chr15 21591975 21592290 -79788231 + L1MA3 LINE L1 5948 6145 -160 2001 92 51 34 chr15 21592290 21592584 -79787937 + AluSp SINE Alu 15 313 0 1006 133 24 229 chr15 21592584 21592718 -79787803 + L1MA3 LINE L1 6145 6305 0 410 167 114 53 chr15 21592883 21593015 -79787506 + L1MDa LINE L1 2065 2204 -4336 1204 140 19 43 chr15 21593016 21593223 -79787298 + AluJo SINE Alu 88 289 -23 1327 241 54 35 chr15 21593223 21594000 -79786521 + L1MDa LINE L1 2196 2993 -3547 1307 243 45 43 chr15 21593990 21594409 -79786112 + L1MD2 LINE L1 5921 6340 -19 * 272 240 0 10 chr15 21595923 21596019 -79784502 + (TG)n Simple_repeat Simple_repeat 2 96 0 21 36 0 0 chr15 21596160 21596188 -79784333 + AT_rich Low_complexity Low_complexity 1 28 0 471 172 0 28 chr15 21596191 21596424 -79784097 + AluJo SINE Alu 1 286 -26 185 139 0 70 chr15 21596545 21596588 -79783933 - MIR SINE MIR -63 145 106 2260 121 0 0 chr15 21597022 21597327 -79783194 - AluSg SINE Alu -5 305 1 2140 107 4 0 chr15 21597721 21598036 -79782485 - AluSx SINE Alu 0 316 1 2581 192 28 102 chr15 21598832 21599578 -79780943 - LTR8 LTR ERV1 0 691 1 287 336 66 0 chr15 21599580 21599717 -79780804 + MIR SINE MIR 97 242 -20 2163 132 0 24 chr15 21600448 21600789 -79779732 - MER1B DNA MER1_type -4 333 1 189 255 102 20 chr15 21601010 21601108 -79779413 - MIR3 SINE MIR -22 186 81 2503 71 0 0 chr15 21601519 21601816 -79778705 - AluY SINE Alu -14 297 1 352 230 210 26 chr15 21601951 21602260 -79778261 + L1ME4a LINE L1 5753 6118 -3 226 160 200 0 chr15 21602290 21602340 -79778181 + FLAM_A SINE Alu 1 60 -72 2466 79 0 3 chr15 21602460 21602764 -79777757 + AluY SINE Alu 1 303 -8 512 76 0 0 chr15 21603136 21603202 -79777319 + LTR8A LTR ERV1 1 66 -661 3153 165 16 76 chr15 21603202 21603937 -79776584 - LTR8 LTR ERV1 0 691 1 34 0 0 0 chr15 21604308 21604342 -79776179 + AT_rich Low_complexity Low_complexity 1 34 0 2708 158 54 87 chr15 21604474 21605284 -79775237 - MER4D LTR ERV1 -8 895 1 3642 173 96 14 chr15 21605530 21606405 -79774116 - LTR28 LTR ERV1 0 1020 1 181 402 10 0 chr15 21606823 21606925 -79773596 + L2 LINE L2 1160 1262 -2052 200 267 0 0 chr15 21607134 21607179 -79773342 + (TCCA)n Simple_repeat Simple_repeat 3 47 0 342 0 0 0 chr15 21607209 21607247 -79773274 + (CA)n Simple_repeat Simple_repeat 1 38 0 1222 188 42 127 chr15 21607374 21607783 -79772738 - MLT1A2 LTR MaLR 0 374 1 2027 165 32 0 chr15 21608554 21608929 -79771592 + L1MB3 LINE L1 5790 6176 -7 3925 195 39 31 chr15 21609375 21609764 -79770757 + L1MB7 LINE L1 4978 5362 -822 2485 72 0 0 chr15 21609764 21610068 -79770453 + AluY SINE Alu 1 304 -7 3925 195 39 31 chr15 21610068 21610862 -79769659 + L1MB7 LINE L1 5362 6175 -9 521 168 126 0 chr15 21611020 21611115 -79769406 + FRAM SINE Alu 38 144 -32 1140 201 28 42 chr15 21611646 21611934 -79768587 - AluJo SINE Alu -17 295 12 2116 191 30 7 chr15 21612218 21612648 -79767873 - MLT1C LTR MaLR 0 467 28 193 289 0 0 chr15 21612989 21613041 -79767480 + L2 LINE L2 3261 3312 -1 234 0 0 0 chr15 21613258 21613284 -79767237 + (CA)n Simple_repeat Simple_repeat 1 26 0 220 212 30 15 chr15 21614064 21614130 -79766391 + (TAAA)n Simple_repeat Simple_repeat 3 69 0 901 180 0 173 chr15 21614495 21614719 -79765802 + MER8 DNA MER2_type 1 166 -73 1708 188 3 13 chr15 21614719 21615028 -79765493 + AluJo SINE Alu 6 311 -1 901 180 0 173 chr15 21615028 21615092 -79765429 + MER8 DNA MER2_type 166 239 0 2417 68 0 0 chr15 21616378 21616670 -79763851 - AluY SINE Alu -19 292 1 1995 160 20 18 chr15 21617289 21617632 -79762889 + MER2 DNA MER2_type 1 344 0 251 224 59 47 chr15 21618193 21618278 -79762243 - MER5B DNA MER1_type -40 138 53 321 324 122 15 chr15 21618304 21618705 -79761816 - L2 LINE L2 -982 2332 1889 895 296 106 17 chr15 21618758 21619231 -79761290 + L1MEd LINE L1 2 516 -5603 1635 275 138 41 chr15 21619356 21620516 -79760005 - L2 LINE L2 -3 3310 2030 438 136 152 32 chr15 21620516 21620637 -79759884 - LTR40b LTR ERVL 0 462 355 539 186 0 0 chr15 21620637 21620723 -79759798 - MER45 DNA AcHobo 0 1581 1496 317 75 19 0 chr15 21621884 21621937 -79758584 + (TA)n Simple_repeat Simple_repeat 2 55 0 180 111 0 0 chr15 21622032 21622059 -79758462 + (TATG)n Simple_repeat Simple_repeat 2 28 0 293 329 20 13 chr15 21622572 21622721 -79757800 - L2 LINE L2 -922 2392 2243 4860 37 4 9 chr15 21622919 21623480 -79757041 - LTR6B LTR ERV1 0 558 1 22 56 0 0 chr15 21623625 21623661 -79756860 + AT_rich Low_complexity Low_complexity 1 36 0 283 342 99 25 chr15 21624015 21624217 -79756304 - MIR SINE MIR -13 249 33 314 361 46 0 chr15 21624916 21625024 -79755497 + L2 LINE L2 3137 3249 -23 255 0 111 0 chr15 21628189 21628234 -79752287 + T-rich Low_complexity Low_complexity 1 50 0 250 245 0 0 chr15 21628569 21628618 -79751903 + L2 LINE L2 3265 3313 0 14513 126 44 16 chr15 21628623 21630953 -79749568 - Tigger1 DNA MER2_type 0 2418 23 203 267 67 40 chr15 21631846 21631921 -79748600 + MIR SINE MIR 93 169 -93 1568 203 60 8 chr15 21632904 21633274 -79747247 - MER74A LTR ERVL 0 558 170 989 185 28 4 chr15 21633339 21633546 -79746975 - MER74A LTR ERVL -360 262 2 211 203 102 0 chr15 21634908 21634967 -79745554 + L3b LINE CR1 1304 1368 -215 315 128 70 23 chr15 21636929 21637101 -79743420 + (TG)n Simple_repeat Simple_repeat 1 180 0 15954 28 23 1 chr15 21637227 21639914 -79740607 - L1PA3 LINE L1 -2 6153 3402 236 69 0 0 chr15 21639908 21639937 -79740584 + L1PA3 LINE L1 3394 3422 -2724 * 278 193 0 18 chr15 21642353 21642410 -79738111 - L1ME LINE L1 -535 5586 5531 462 294 73 104 chr15 21642840 21643292 -79737229 + L2 LINE L2 2832 3269 -44 186 43 0 0 chr15 21643442 21643465 -79737056 + (TTCC)n Simple_repeat Simple_repeat 2 24 0 2333 119 0 0 chr15 21643465 21643775 -79736746 - AluSg SINE Alu 0 310 1 1440 218 0 14 chr15 21643777 21644070 -79736451 - AluJo SINE Alu -18 294 6 310 309 78 79 chr15 21644130 21644799 -79735722 - L1M4 LINE L1 -1488 4658 3991 3169 119 32 19 chr15 21644811 21645342 -79735179 - LOR1-int LTR ERV1 -5643 2477 1940 * 4545 106 25 21 chr15 21645341 21646093 -79734428 - LOR1-int LTR ERV1 -6323 1797 1043 912 137 63 30 chr15 21646086 21646266 -79734255 - LOR1-int LTR ERV1 -6603 1213 701 * 1296 148 27 5 chr15 21646251 21646474 -79734047 - LOR1-int LTR ERV1 -7528 592 365 2564 138 22 118 chr15 21646499 21647049 -79733472 - LOR1a LTR ERV1 0 497 1 690 200 0 58 chr15 21647049 21647239 -79733282 - L1MA7 LINE L1 -79 6416 6238 4636 172 46 15 chr15 21647545 21647772 -79732749 - L1MA7 LINE L1 -265 6230 6012 456 19 0 0 chr15 21647772 21647825 -79732696 + (TG)n Simple_repeat Simple_repeat 2 54 0 4636 172 46 15 chr15 21647825 21649155 -79731366 - L1MA7 LINE L1 -483 6012 4604 180 0 0 0 chr15 21649155 21649175 -79731346 + (TTTTA)n Simple_repeat Simple_repeat 3 22 0 4636 172 46 15 chr15 21649175 21649294 -79731227 - L1MA7 LINE L1 -1891 4604 4490 225 0 0 0 chr15 21649294 21649319 -79731202 + (TTTTG)n Simple_repeat Simple_repeat 3 27 0 1103 232 4 8 chr15 21649329 21649570 -79730951 - AluJo SINE Alu -22 290 51 3019 123 7 7 chr15 21649634 21650064 -79730457 - MER57B LTR ERV1 -3 431 2 477 80 0 0 chr15 21650066 21650141 -79730380 + (TCTA)n Simple_repeat Simple_repeat 4 78 0 1225 192 8 27 chr15 21650190 21650451 -79730070 - L1MA7 LINE L1 -1944 4406 4151 14887 180 22 13 chr15 21650462 21650730 -79729791 - L1MA2 LINE L1 0 7723 7459 2242 134 132 5 chr15 21650730 21651110 -79729411 + MSTA LTR MaLR 1 428 0 14887 180 22 13 chr15 21651110 21655312 -79725209 - L1MA2 LINE L1 -264 7459 3217 2912 254 39 63 chr15 21655307 21655486 -79725035 - L1MA7 LINE L1 -3965 2385 2203 * 2000 102 49 0 chr15 21655486 21655770 -79724751 - AluSx SINE Alu -14 298 1 2912 254 39 63 chr15 21655770 21657542 -79722979 - L1MA7 LINE L1 -4147 2203 804 2261 304 36 24 chr15 21657690 21658543 -79721978 - L1MA7 LINE L1 -5520 761 2 2479 134 32 55 chr15 21659691 21660125 -79720396 + MSTC LTR MaLR 1 424 -4 21 0 0 0 chr15 21660658 21660679 -79719842 + AT_rich Low_complexity Low_complexity 1 21 0 2082 156 89 60 chr15 21660827 21661264 -79719257 - LTR47A LTR ERVL -1 451 2 391 248 70 78 chr15 21661270 21661500 -79719021 + L1M4 LINE L1 1 228 -6314 296 308 41 31 chr15 21661796 21661968 -79718553 + L1M4 LINE L1 543 938 -5708 1341 186 3 69 chr15 21662098 21662388 -79718133 + AluJo SINE Alu 3 273 -39 872 245 99 25 chr15 21662428 21662791 -79717730 + L1M4 LINE L1 852 1241 -5301 428 195 15 41 chr15 21662801 21662866 -79717655 - L1M2 LINE L1 -708 5475 5410 3537 171 54 17 chr15 21662866 21662907 -79717614 + L1MB4 LINE L1 5429 5467 -713 207 0 0 0 chr15 21662907 21662930 -79717591 + (TA)n Simple_repeat Simple_repeat 2 24 0 3537 171 54 17 chr15 21662930 21663610 -79716911 + L1MB4 LINE L1 5467 6179 -1 428 195 15 41 chr15 21663610 21663699 -79716822 - L1M2 LINE L1 -773 5410 5328 262 102 102 20 chr15 21663782 21663831 -79716690 + MER5A DNA MER1_type 9 61 -128 2095 94 4 7 chr15 21663876 21664151 -79716370 - AluSg SINE Alu -8 302 29 687 219 22 114 chr15 21664917 21665145 -79715376 + MER3 DNA MER1_type 3 209 0 257 240 0 0 chr15 21665102 21665152 -79715369 - MER3 DNA MER1_type -119 90 41 * 519 319 52 42 chr15 21665860 21666167 -79714354 - MLT1H LTR MaLR -239 310 1 259 322 88 59 chr15 21667074 21667347 -79713174 - L2 LINE L2 -2 3311 3031 439 235 111 12 chr15 21667675 21667837 -79712684 + Tigger8 DNA MER2_type 211 388 -278 230 263 13 0 chr15 21668190 21668266 -79712255 + (TA)n Simple_repeat Simple_repeat 2 78 0 589 321 20 13 chr15 21668374 21668599 -79711922 + MIR SINE MIR 23 252 -10 2149 166 37 21 chr15 21669757 21670190 -79710331 - L1MA7 LINE L1 -34 6257 5818 592 81 0 47 chr15 21670207 21670293 -79710228 - AluSg/x SINE Alu -11 299 218 306 73 0 0 chr15 21670474 21670515 -79710006 + (TG)n Simple_repeat Simple_repeat 2 42 0 2223 84 7 10 chr15 21670616 21670936 -79709585 + AluY SINE Alu 1 311 0 1012 169 13 56 chr15 21672728 21672837 -79707684 + L1MA8 LINE L1 6071 6166 -125 2318 74 3 7 chr15 21672837 21673134 -79707387 + AluY SINE Alu 1 296 -15 1012 169 13 56 chr15 21673134 21673255 -79707266 + L1MA8 LINE L1 6166 6291 0 24 0 0 0 chr15 21673257 21673281 -79707240 + AT_rich Low_complexity Low_complexity 1 24 0 224 213 0 0 chr15 21673684 21673731 -79706790 + GA-rich Low_complexity Low_complexity 2 48 0 420 264 101 71 chr15 21674429 21674766 -79705755 + L3 LINE CR1 1165 1511 -66 617 294 161 26 chr15 21674934 21675441 -79705080 - L2 LINE L2 -5 3308 2728 206 297 54 0 chr15 21677466 21677540 -79702981 + L2 LINE L2 2973 3050 -222 1547 199 39 14 chr15 21678826 21679108 -79701413 + AluJo SINE Alu 1 289 -13 495 153 163 0 chr15 21679162 21679260 -79701261 - Tigger3(Golem) DNA MER2_type -2915 114 1 273 280 58 79 chr15 21679267 21679373 -79701148 - L1MEd LINE L1 -4785 1344 1237 2130 139 0 0 chr15 21679373 21679682 -79700839 - AluSx SINE Alu -3 309 1 273 280 58 79 chr15 21679682 21679929 -79700592 - L1MEd LINE L1 -4892 1237 1007 241 326 34 11 chr15 21679915 21680004 -79700517 - L1MEd LINE L1 -5482 637 547 * 21 0 0 0 chr15 21681229 21681250 -79699271 + AT_rich Low_complexity Low_complexity 1 21 0 4166 174 67 35 chr15 21681997 21682851 -79697670 - L1MB8 LINE L1 -2 6176 5278 1938 144 0 3 chr15 21682851 21683135 -79697386 - AluJo SINE Alu -19 293 11 4166 174 67 35 chr15 21683135 21683314 -79697207 - L1MB8 LINE L1 -900 5278 5106 201 119 24 24 chr15 21683518 21683560 -79696961 + T-rich Low_complexity Low_complexity 4 45 0 565 158 87 8 chr15 21685528 21685655 -79694866 - MER3 DNA MER1_type -8 201 65 1986 128 0 0 chr15 21686182 21686456 -79694065 - AluSx SINE Alu -38 274 1 1174 141 0 10 chr15 21686492 21686684 -79693837 + Tigger7 DNA MER2_type 2298 2487 0 2021 99 53 30 chr15 21686693 21686995 -79693526 - AluSg SINE Alu -1 309 1 25 0 0 0 chr15 21687004 21687029 -79693492 + AT_rich Low_complexity Low_complexity 1 25 0 422 152 40 40 chr15 21687044 21687143 -79693378 + L1MB7 LINE L1 6077 6175 -9 1242 233 113 33 chr15 21687652 21688192 -79692329 - L1M4 LINE L1 -3401 2745 2163 843 148 0 40 chr15 21688208 21688384 -79692137 - Charlie5 DNA MER1_type 0 2612 2444 2146 103 14 7 chr15 21688386 21688676 -79691845 - AluSx SINE Alu -14 298 7 231 61 0 0 chr15 21688694 21688727 -79691794 + (GA)n Simple_repeat Simple_repeat 2 34 0 276 284 27 0 chr15 21690028 21690102 -79690419 - MIR SINE MIR -71 191 116 2096 89 7 0 chr15 21690344 21690615 -79689906 - AluSc SINE Alu 0 309 37 448 176 0 0 chr15 21691116 21691190 -79689331 + MLT1I LTR MaLR 336 409 0 25 0 0 0 chr15 21691573 21691598 -79688923 + AT_rich Low_complexity Low_complexity 1 25 0 514 307 50 39 chr15 21692653 21693011 -79687510 + L1ME4a LINE L1 5518 5879 -242 2151 106 0 58 chr15 21693604 21693933 -79686588 + AluSg SINE Alu 1 310 0 1766 184 0 19 chr15 21695665 21695975 -79684546 - AluJb SINE Alu -8 304 1 379 237 13 92 chr15 21696434 21696586 -79683935 - MER69A DNA AcHobo -1 176 37 234 0 0 0 chr15 21697225 21697251 -79683270 + (CAT)n Simple_repeat Simple_repeat 1 26 0 420 323 46 32 chr15 21697295 21697512 -79683009 - MIR SINE MIR -30 232 13 1548 153 8 4 chr15 21698145 21698380 -79682141 - MER46A DNA MER2_type 0 236 1 23 54 0 0 chr15 21698489 21698526 -79681995 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr15 21702725 21702746 -79677775 + AT_rich Low_complexity Low_complexity 1 21 0 1761 180 22 19 chr15 21702852 21703175 -79677346 - MSTA LTR MaLR -2 426 103 943 88 7 61 chr15 21703170 21703318 -79677203 + MSTA LTR MaLR 12 151 -277 * 297 56 0 0 chr15 21703428 21703464 -79677057 - MSTA LTR MaLR -392 36 1 3096 135 9 0 chr15 21704510 21704970 -79675551 - L1PA15 LINE L1 -2 6163 5700 2280 88 0 23 chr15 21706750 21707058 -79673463 - AluSc SINE Alu -8 301 1 819 153 0 0 chr15 21707627 21707745 -79672776 + FLAM_C SINE Alu 1 118 -15 673 122 0 43 chr15 21707746 21707934 -79672587 + (TA)n Simple_repeat Simple_repeat 1 180 0 829 139 0 0 chr15 21707947 21708069 -79672452 + FRAM SINE Alu 31 152 -24 2349 84 0 0 chr15 21708513 21708811 -79671710 + AluY SINE Alu 8 305 -6 2391 81 3 3 chr15 21709649 21709947 -79670574 + AluSp SINE Alu 1 298 -15 830 248 25 46 chr15 21711052 21711334 -79669187 - MLT1E2 LTR MaLR 0 626 351 1839 118 16 3 chr15 21711334 21711655 -79668866 - L1M1 LINE L1 -681 5622 5298 703 288 58 18 chr15 21711656 21711964 -79668557 - MLT1E2 LTR MaLR -274 352 29 2731 119 72 15 chr15 21711964 21712425 -79668096 - LTR45B LTR ERV1 0 489 3 703 288 58 18 chr15 21712425 21712443 -79668078 - MLT1E2 LTR MaLR -597 29 13 180 200 0 0 chr15 21714241 21714286 -79666235 + (CA)n Simple_repeat Simple_repeat 2 46 0 258 81 0 0 chr15 21716733 21716770 -79663751 + (CA)n Simple_repeat Simple_repeat 2 38 0 336 302 35 53 chr15 21719858 21720027 -79660494 - HAL1b LINE L1 -457 891 726 1167 270 33 2 chr15 21720690 21721083 -79659438 - L1M4 LINE L1 -1909 4237 3833 6892 56 3 122 chr15 21721110 21722162 -79658359 - L1PA7 LINE L1 -4 6150 5136 362 330 56 39 chr15 21722401 21722634 -79657887 - HAL1 LINE L1 -698 1809 1573 232 293 20 0 chr15 21722640 21722739 -79657782 - HAL1b LINE L1 -866 482 382 472 332 164 15 chr15 21722800 21723074 -79657447 - HAL1 LINE L1 -1091 1416 1102 335 257 100 0 chr15 21723077 21723094 -79657427 - L1MA10 LINE L1 -1 6333 6317 2524 227 66 59 chr15 21723094 21723598 -79656923 - L1ME1 LINE L1 -9 6157 5658 241 94 0 0 chr15 21723598 21723630 -79656891 - U2 snRNA snRNA -155 33 2 2524 227 66 59 chr15 21723630 21724745 -79655776 - L1ME1 LINE L1 -508 5658 4504 868 142 120 49 chr15 21724759 21724942 -79655579 - MER20 DNA MER1_type 0 219 24 330 222 15 89 chr15 21724971 21725018 -79655503 - L1ME1 LINE L1 -1640 4506 4457 2266 97 7 3 chr15 21725018 21725318 -79655203 - AluSp SINE Alu -12 301 1 330 222 15 89 chr15 21725318 21725405 -79655116 - L1ME1 LINE L1 -1689 4457 4382 2434 94 0 0 chr15 21725917 21726226 -79654295 + AluSg SINE Alu 1 309 -1 2403 80 0 3 chr15 21728180 21728482 -79652039 + AluY SINE Alu 1 301 -10 338 205 40 40 chr15 21728765 21728916 -79651605 + L1MB7 LINE L1 4477 4627 -1519 267 146 51 0 chr15 21728934 21729000 -79651521 - MLT2C2 LTR ERVL -2 462 417 2322 188 33 7 chr15 21729253 21729706 -79650815 + MLT1C LTR MaLR 3 467 0 3141 160 29 21 chr15 21730524 21731155 -79649366 + LTR51 LTR ERV1 1 636 -35 1074 132 3 5 chr15 21731159 21731439 -79649082 + MER4B LTR ERV1 1 317 -293 * 1149 139 81 14 chr15 21731430 21731653 -79648868 + MER4E LTR ERV1 531 768 -11 305 322 86 78 chr15 21731999 21732359 -79648162 + L1M4b LINE L1 340 702 -6157 417 221 0 0 chr15 21732369 21732455 -79648066 + L1M4b LINE L1 969 1054 -5805 949 172 0 0 chr15 21732455 21732600 -79647921 + AluSq/x SINE Alu 1 145 -168 291 245 5 20 chr15 21732628 21732733 -79647788 + FLAM_A SINE Alu 7 56 -76 635 103 0 0 chr15 21732770 21732857 -79647664 + MER4B LTR ERV1 30 116 -494 1023 221 4 4 chr15 21732857 21733101 -79647420 + L1MB7 LINE L1 4706 4949 -1197 300 220 0 0 chr15 21733103 21733162 -79647359 - L1 LINE L1 -843 5303 5245 2927 188 21 3 chr15 21733165 21733770 -79646751 - L1 LINE L1 -876 5270 4655 * 3085 228 30 40 chr15 21733765 21734401 -79646120 + L1MB7 LINE L1 4958 5568 -616 2421 68 0 7 chr15 21734401 21734697 -79645824 - AluY SINE Alu -15 296 3 3085 228 30 40 chr15 21734697 21735308 -79645213 + L1MB7 LINE L1 5568 6184 0 416 302 24 0 chr15 21735299 21735468 -79645053 + L1M4b LINE L1 2364 2536 -4602 * 998 171 37 5 chr15 21735467 21735683 -79644838 + L1MA6 LINE L1 5895 6117 -183 596 193 20 13 chr15 21735791 21735941 -79644580 + L1MA8 LINE L1 6139 6289 -2 25 0 0 0 chr15 21735975 21736000 -79644521 + AT_rich Low_complexity Low_complexity 1 25 0 211 217 0 0 chr15 21736585 21736631 -79643890 + (CTA)n Simple_repeat Simple_repeat 1 46 0 314 314 93 0 chr15 21736644 21736762 -79643759 - MIR SINE MIR -17 245 117 1036 168 16 0 chr15 21737217 21737408 -79643113 + MLT1A1 LTR MaLR 1 194 -171 367 258 110 19 chr15 21737452 21737607 -79642914 - MLT1H LTR MaLR -318 231 63 296 156 0 0 chr15 21738127 21738172 -79642349 - MLT1A1 LTR MaLR 0 365 321 24 0 0 0 chr15 21739369 21739393 -79641128 + AT_rich Low_complexity Low_complexity 1 24 0 251 156 0 22 chr15 21739979 21740024 -79640497 + L2 LINE L2 3220 3263 -9 2071 107 0 0 chr15 21740489 21740759 -79639762 + AluSc SINE Alu 1 270 -39 3853 163 44 13 chr15 21740802 21741551 -79638970 + LTR39 LTR ERV1 12 783 0 2330 88 7 0 chr15 21743054 21743349 -79637172 - AluSg SINE Alu -12 298 2 780 174 71 10 chr15 21743360 21743556 -79636965 - L1MD2 LINE L1 -1 6358 6151 228 111 0 0 chr15 21743558 21743594 -79636927 + (TG)n Simple_repeat Simple_repeat 2 37 0 26875 126 9 79 chr15 21743734 21749225 -79631296 - L1P LINE L1 -1026 5120 12 3310 240 71 32 chr15 21749261 21750375 -79630146 - L1M4 LINE L1 -2681 3701 2537 2167 125 0 0 chr15 21750375 21750663 -79629858 - AluSx SINE Alu -13 299 12 3310 240 71 32 chr15 21750663 21750873 -79629648 - L1M4 LINE L1 -3845 2537 2337 1479 185 0 38 chr15 21750905 21751192 -79629329 - AluJo SINE Alu -5 307 32 329 322 68 49 chr15 21751193 21751398 -79629123 - HAL1 LINE L1 -1480 1027 819 993 228 14 9 chr15 21752330 21752549 -79627972 + MER58A DNA MER1_type 2 221 -3 3724 233 31 8 chr15 21753317 21754487 -79626034 + L1MB8 LINE L1 3180 4375 -1771 3475 174 42 19 chr15 21754489 21755239 -79625282 + L1MB8 LINE L1 4892 5763 -415 2456 66 0 0 chr15 21755239 21755541 -79624980 + AluY SINE Alu 1 302 -9 3475 174 42 19 chr15 21755541 21755966 -79624555 + L1MB8 LINE L1 5763 6177 -1 642 286 127 9 chr15 21755991 21756313 -79624208 - MLT1J LTR MaLR -49 462 103 1907 118 66 3 chr15 21756313 21756602 -79623919 - AluSg SINE Alu -3 307 1 27 62 0 0 chr15 21756793 21756841 -79623680 + AT_rich Low_complexity Low_complexity 1 48 0 28 48 0 0 chr15 21757492 21757534 -79622987 + AT_rich Low_complexity Low_complexity 1 42 0 338 263 103 0 chr15 21757725 21757822 -79622699 + MIR SINE MIR 42 147 -77 206 362 78 52 chr15 21758626 21758897 -79621624 - L2 LINE L2 -2 3270 2993 26 0 0 0 chr15 21759344 21759370 -79621151 + AT_rich Low_complexity Low_complexity 1 26 0 1960 118 36 4 chr15 21759754 21760034 -79620487 - AluSx SINE Alu -23 289 1 326 200 38 0 chr15 21760950 21761043 -79619478 - LTR16A1 LTR ERVL 0 457 377 2294 114 16 147 chr15 21761344 21761894 -79618627 + LTR12 LTR ERV1 1 478 -236 605 235 39 11 chr15 21761895 21762074 -79618447 - MLT1A1 LTR MaLR -176 189 6 1975 165 63 24 chr15 21762761 21762802 -79617719 - MSTA LTR MaLR 0 428 390 2072 59 4 15 chr15 21762802 21763072 -79617449 + AluY SINE Alu 39 305 -6 1975 165 63 24 chr15 21763072 21763442 -79617079 - MSTA LTR MaLR -38 390 1 208 293 26 78 chr15 21764153 21764166 -79616355 - MIR SINE MIR -32 230 218 2750 26 0 0 chr15 21764166 21764475 -79616046 - AluY SINE Alu -2 309 1 208 293 26 78 chr15 21764475 21764577 -79615944 - MIR SINE MIR -44 218 121 204 289 0 40 chr15 21764702 21764778 -79615743 - L2 LINE L2 -164 3108 3036 711 273 133 7 chr15 21764984 21765255 -79615266 - LTR40a LTR ERVL -148 371 67 1044 286 87 21 chr15 21766888 21767405 -79613116 + L1MCb LINE L1 5 555 -5490 926 190 37 9 chr15 21767515 21767731 -79612790 + L1MCb LINE L1 570 791 -5254 2277 241 115 38 chr15 21767967 21769521 -79611000 + L1MCb LINE L1 786 2637 -4108 315 213 0 0 chr15 21769524 21769604 -79610917 + (TA)n Simple_repeat Simple_repeat 1 80 0 324 300 0 0 chr15 21769605 21769695 -79610826 - L1MC4 LINE L1 -1339 6703 6614 1207 261 46 14 chr15 21769707 21770189 -79610332 + L1MCb LINE L1 2618 3114 -3450 814 244 116 7 chr15 21770190 21770465 -79610056 - L1M4 LINE L1 -1195 5449 5145 2193 256 57 19 chr15 21770478 21770541 -79609980 - L1M4 LINE L1 -1892 4752 4693 1960 131 14 7 chr15 21770541 21770832 -79609689 + AluSx SINE Alu 1 293 -19 2193 256 57 19 chr15 21770832 21771680 -79608841 - L1M4 LINE L1 -1951 4693 3806 838 261 36 63 chr15 21771681 21772175 -79608346 - L1M4 LINE L1 -5146 1396 916 906 189 71 0 chr15 21772235 21772404 -79608117 - AluSg/x SINE Alu -13 299 119 2234 131 123 5 chr15 21773392 21773775 -79606746 - MSTA LTR MaLR 0 428 1 1152 77 21 0 chr15 21774437 21774580 -79605941 + AluYb8 SINE Alu 5 150 -168 855 167 0 0 chr15 21775033 21775165 -79605356 + FLAM_C SINE Alu 2 133 0 320 212 59 12 chr15 21776339 21776424 -79604097 + MIR SINE MIR 84 172 -90 1475 185 28 11 chr15 21776718 21777081 -79603440 + Looper DNA T2_type 2 370 -1188 1021 193 106 0 chr15 21777084 21777302 -79603219 + MLT1E2 LTR MaLR 1 241 -385 19618 165 28 6 chr15 21777890 21785054 -79595467 + L1MA2 LINE L1 12 7332 -391 211 281 12 61 chr15 21785068 21785150 -79595371 + MIR SINE MIR 88 165 -97 22 56 0 0 chr15 21785175 21785211 -79595310 + AT_rich Low_complexity Low_complexity 1 36 0 3344 204 119 15 chr15 21786508 21787532 -79592989 - L1MC4a LINE L1 -1 7807 6677 414 267 37 47 chr15 21787533 21787724 -79592797 - L2 LINE L2 -26 3287 3099 236 346 13 0 chr15 21787808 21787886 -79592635 - L2 LINE L2 -239 3074 2996 917 194 26 38 chr15 21787888 21788201 -79592320 - MLT1A2 LTR MaLR 0 374 1 1030 291 143 27 chr15 21788222 21788775 -79591746 - L2 LINE L2 -337 2977 2361 204 250 29 44 chr15 21788833 21788901 -79591620 + MIR SINE MIR 195 261 -1 2150 120 3 7 chr15 21789503 21789802 -79590719 + AluSx SINE Alu 1 298 -14 1499 269 120 43 chr15 21789987 21790222 -79590299 - HAL1 LINE L1 -16 2491 2276 450 0 0 0 chr15 21790222 21790272 -79590249 + (CA)n Simple_repeat Simple_repeat 1 50 0 1499 269 120 43 chr15 21790272 21790857 -79589664 - HAL1 LINE L1 -231 2276 1738 2220 25 79 7 chr15 21790857 21791134 -79589387 + AluY SINE Alu 1 297 -14 1499 269 120 43 chr15 21791134 21791648 -79588873 - HAL1 LINE L1 -769 1738 1053 2129 110 28 0 chr15 21791651 21791941 -79588580 - AluSx SINE Alu -14 298 1 3502 152 57 42 chr15 21791944 21792721 -79587800 - L1MC1 LINE L1 -12 6321 5534 1207 282 71 63 chr15 21792751 21793387 -79587134 - HAL1 LINE L1 -1478 1029 399 504 0 0 0 chr15 21793387 21793443 -79587078 + (TC)n Simple_repeat Simple_repeat 2 57 0 180 0 0 0 chr15 21793448 21793468 -79587053 + (TG)n Simple_repeat Simple_repeat 1 20 0 1207 282 71 63 chr15 21793468 21793740 -79586781 - HAL1 LINE L1 -2111 396 108 7215 188 113 51 chr15 21794074 21794408 -79586113 - L1MC3 LINE L1 -222 7563 7251 262 212 35 12 chr15 21794408 21794493 -79586028 - MLT1F1 LTR MaLR -436 131 45 7215 188 113 51 chr15 21794493 21794950 -79585571 - L1MC3 LINE L1 -534 7251 6824 210 37 0 0 chr15 21794950 21794977 -79585544 + (CA)n Simple_repeat Simple_repeat 2 28 0 7215 188 113 51 chr15 21794977 21796214 -79584307 - L1MC3 LINE L1 -961 6824 5317 320 203 7 105 chr15 21796224 21796367 -79584154 - L1MC4 LINE L1 0 8042 7914 246 239 45 23 chr15 21796452 21796540 -79583981 - L1MC4 LINE L1 -152 7890 7801 843 254 84 4 chr15 21796643 21796918 -79583603 - L1MC4 LINE L1 -411 7631 7335 * 1678 210 75 10 chr15 21796907 21797402 -79583119 - L1MDa LINE L1 -4441 2099 1573 * 4019 221 42 36 chr15 21797397 21798677 -79581844 - L1MC3 LINE L1 -1168 4978 3691 804 249 47 16 chr15 21798683 21798940 -79581581 + MLT1C LTR MaLR 61 325 -142 336 288 80 16 chr15 21799269 21799394 -79581127 + L2 LINE L2 3178 3310 -3 842 169 14 0 chr15 21801355 21801487 -79579034 + BC200 scRNA scRNA 1 137 -63 2396 106 3 0 chr15 21801487 21801799 -79578722 + AluSp SINE Alu 1 313 0 2807 168 82 5 chr15 21804936 21805533 -79574988 - MER73 LTR ERVL -1 643 1 506 200 23 31 chr15 21806071 21806201 -79574320 + MER4D LTR ERV1 775 903 0 195 276 200 55 chr15 21806312 21806457 -79574064 + MIR3 SINE MIR 15 180 -28 890 112 7 13 chr15 21806573 21806725 -79573796 + L1MA10 LINE L1 6180 6330 -4 2389 132 38 2 chr15 21806872 21807289 -79573232 + LTR23 LTR ERV1 1 432 -5 1440 122 90 8 chr15 21807837 21808082 -79572439 - LTR23 LTR ERV1 -12 425 161 761 151 86 0 chr15 21808153 21808292 -79572229 - LTR23 LTR ERV1 -286 151 1 343 109 315 33 chr15 21808304 21808396 -79572125 + LTR48B LTR ERV1 1 118 -669 * 1129 113 20 56 chr15 21808393 21808446 -79572075 + LTR23 LTR ERV1 250 303 -134 2198 117 0 0 chr15 21808446 21808746 -79571775 + AluSc SINE Alu 1 300 -9 1129 113 20 56 chr15 21808746 21808887 -79571634 + LTR23 LTR ERV1 303 437 0 1337 255 97 28 chr15 21808935 21809445 -79571076 + LTR48B LTR ERV1 117 644 0 3586 182 22 34 chr15 21809721 21810435 -79570086 - MER50 LTR ERV1 -28 706 1 2651 174 86 24 chr15 21810472 21811040 -79569481 - LTR51 LTR ERV1 0 671 65 925 103 35 6 chr15 21811040 21811214 -79569307 + CT-rich Low_complexity Low_complexity 2 180 0 2651 174 86 24 chr15 21811214 21811227 -79569294 - LTR51 LTR ERV1 -606 65 54 4263 115 14 36 chr15 21811255 21811923 -79568598 - L1PA13 LINE L1 -23 6140 5488 927 126 0 0 chr15 21811910 21812053 -79568468 - L1PA13 LINE L1 -1792 4354 4212 * 4162 152 43 14 chr15 21812048 21812957 -79567564 - L1P4 LINE L1 -663 5498 4572 4487 224 30 49 chr15 21813059 21813890 -79566631 - L1MC/D LINE L1 -603 5639 4860 1523 164 0 85 chr15 21813890 21814207 -79566314 + AluJo SINE Alu 1 290 -22 4487 224 30 49 chr15 21814207 21815093 -79565428 - L1MC/D LINE L1 -1382 4860 3959 293 224 33 86 chr15 21815099 21815251 -79565270 + L1ME3A LINE L1 6015 6158 -12 363 304 101 22 chr15 21815305 21815621 -79564900 + HAL1 LINE L1 1431 1771 -736 1379 64 23 0 chr15 21816685 21816856 -79563665 + AluY SINE Alu 124 298 -13 1753 206 47 113 chr15 21817627 21818184 -79562337 + MER77 LTR ERV1 1 520 -85 10582 178 24 6 chr15 21818184 21819329 -79561192 + L1MA7 LINE L1 3232 4355 -1936 225 0 0 0 chr15 21819329 21819354 -79561167 + (TAAAA)n Simple_repeat Simple_repeat 3 27 0 10582 178 24 6 chr15 21819354 21821204 -79559317 + L1MA7 LINE L1 4355 6281 -10 621 321 46 29 chr15 21821213 21821736 -79558785 + HAL1b LINE L1 70 601 -747 299 259 60 0 chr15 21822143 21822259 -79558262 + Charlie8 DNA MER1_type 142 264 -2153 217 106 21 21 chr15 21822739 21822786 -79557735 + (TATATG)n Simple_repeat Simple_repeat 2 48 0 3300 239 80 26 chr15 21823208 21824465 -79556056 + L1MDb LINE L1 358 1567 -4839 2574 229 15 28 chr15 21824462 21824633 -79555888 - L1M4 LINE L1 -814 5750 5578 * 4011 176 16 53 chr15 21824633 21825316 -79555205 - L1PA13 LINE L1 -1 6162 5505 2574 229 15 28 chr15 21825316 21825813 -79554708 - L1M4 LINE L1 -986 5578 5091 * 3753 252 67 17 chr15 21825809 21827210 -79553311 - L1MCa LINE L1 -2659 3905 2474 399 145 0 79 chr15 21827230 21827615 -79552906 + (TA)n Simple_repeat Simple_repeat 1 354 0 2329 224 167 17 chr15 21827618 21828749 -79551772 - L1MCa LINE L1 -4263 2482 1076 2110 177 47 42 chr15 21828751 21828977 -79551544 - MSTB1 LTR MaLR 0 432 209 4480 109 23 68 chr15 21828977 21829226 -79551295 - L1MA3 LINE L1 0 6305 6046 2117 104 24 3 chr15 21829226 21829515 -79551006 - AluSc SINE Alu -14 295 1 4480 109 23 68 chr15 21829515 21829862 -79550659 - L1MA3 LINE L1 -259 6046 5747 2344 99 0 3 chr15 21829862 21830164 -79550357 - AluSx SINE Alu -11 301 1 4480 109 23 68 chr15 21830164 21830317 -79550204 - L1MA3 LINE L1 -558 5747 5589 2110 177 47 42 chr15 21830317 21830520 -79550001 - MSTB1 LTR MaLR -223 209 1 1512 257 88 94 chr15 21830521 21830664 -79549857 - L1MCa LINE L1 -4969 1076 934 2042 118 13 10 chr15 21830664 21830968 -79549553 - AluSc SINE Alu -4 305 1 1512 257 88 94 chr15 21830968 21831832 -79548689 - L1MCa LINE L1 -5111 934 75 208 296 56 64 chr15 21831857 21831982 -79548539 + L2 LINE L2 2031 2154 -1160 386 22 0 0 chr15 21832201 21832246 -79548275 - tRNA-Arg-CGC tRNA tRNA -31 45 1 614 82 0 0 chr15 21832547 21832620 -79547901 - AluSg/x SINE Alu -23 287 215 2456 78 0 3 chr15 21832920 21833229 -79547292 - AluY SINE Alu -3 308 1 249 204 0 0 chr15 21833291 21833340 -79547181 + L2 LINE L2 3265 3313 0 2442 78 0 19 chr15 21834144 21834453 -79546068 - AluY SINE Alu -8 303 1 2170 100 0 13 chr15 21834917 21835216 -79545305 - AluSx SINE Alu -17 295 1 192 77 0 0 chr15 21835231 21835257 -79545264 + (A)n Simple_repeat Simple_repeat 1 26 0 583 243 46 7 chr15 21835258 21835410 -79545111 + MIR SINE MIR 104 261 -1 2297 103 3 6 chr15 21836131 21836442 -79544079 + AluSg SINE Alu 1 310 0 198 0 0 0 chr15 21837087 21837109 -79543412 + (T)n Simple_repeat Simple_repeat 1 22 0 435 262 97 7 chr15 21837420 21837565 -79542956 - MER5B DNA MER1_type -14 164 7 281 109 18 0 chr15 21838744 21838799 -79541722 + (TTCC)n Simple_repeat Simple_repeat 1 56 0 2233 108 3 3 chr15 21838811 21839116 -79541405 - AluSg SINE Alu -5 305 1 780 218 97 24 chr15 21839570 21839735 -79540786 - AluJo SINE Alu -32 280 104 15435 195 25 13 chr15 21839860 21839887 -79540634 - L1PA13 LINE L1 -1769 5028 5003 2028 154 0 0 chr15 21839887 21840198 -79540323 - AluSx SINE Alu -1 311 1 15435 195 25 13 chr15 21840198 21840779 -79539742 - L1PA13 LINE L1 -1794 5003 4430 2360 82 0 0 chr15 21840779 21841073 -79539448 - AluY SINE Alu -17 294 1 15435 195 25 13 chr15 21841073 21843498 -79537023 - L1PA13 LINE L1 -2367 4430 1913 2224 106 0 0 chr15 21843498 21843781 -79536740 - AluSx SINE Alu -29 283 1 15435 195 25 13 chr15 21843781 21845527 -79534994 - L1PA13 LINE L1 -4884 1913 189 1559 144 158 7 chr15 21845527 21845825 -79534696 - MSTA LTR MaLR -85 343 1 1850 182 9 6 chr15 21846121 21846456 -79534065 + L1MC1 LINE L1 5991 6326 -7 211 259 19 0 chr15 21846755 21846809 -79533712 - MIR3 SINE MIR -21 187 133 276 71 0 0 chr15 21846915 21846957 -79533564 - LTR23 LTR ERV1 -5 432 391 1325 188 4 9 chr15 21846957 21847186 -79533335 + AluJo SINE Alu 1 228 -84 1085 143 36 15 chr15 21847187 21847383 -79533138 - LTR56 LTR ERV1 -245 200 1 1587 208 0 16 chr15 21847724 21848032 -79532489 - AluJo SINE Alu -9 303 1 2520 163 71 2 chr15 21848234 21848669 -79531852 - LTR24 LTR ERV1 -2 465 1 1873 213 85 30 chr15 21849162 21849599 -79530922 - LOR1b LTR ERV1 0 461 1 684 303 40 23 chr15 21850631 21850978 -79529543 - MLT1J LTR MaLR -145 366 14 2681 148 7 2 chr15 21851109 21851548 -79528973 + MER41B LTR ERV1 157 597 -38 4116 133 98 3 chr15 21852093 21852749 -79527772 - LTR62 LTR ERVK -1 718 1 394 291 102 5 chr15 21852967 21853163 -79527358 + L2 LINE L2 1769 1983 -1331 232 303 141 28 chr15 21853166 21853417 -79527104 + L2 LINE L2 2964 3247 -25 249 370 7 14 chr15 21853814 21853960 -79526561 - MARNA DNA Mariner -355 231 87 653 152 0 0 chr15 21855917 21856009 -79524512 - AluJ/FLAM SINE Alu -219 93 2 240 283 168 9 chr15 21856552 21856665 -79523856 - LTR33 LTR ERVL 0 521 391 260 257 79 10 chr15 21856753 21856854 -79523667 - LTR33 LTR ERVL -253 268 161 27 73 0 0 chr15 21857637 21857692 -79522829 + AT_rich Low_complexity Low_complexity 1 55 0 1162 306 78 35 chr15 21857707 21858286 -79522235 - HERVL LTR ERVL -2784 2870 2267 328 339 69 16 chr15 21858559 21858748 -79521773 - HERVL LTR ERVL -3068 1928 1730 265 188 16 16 chr15 21859079 21859143 -79521378 + L1MC2 LINE L1 1127 1190 -5233 259 163 0 0 chr15 21859195 21859238 -79521283 + L1M4 LINE L1 3906 3948 -2198 1046 17 0 0 chr15 21859277 21859394 -79521127 - AluY SINE Alu -17 294 178 524 252 63 43 chr15 21859398 21859958 -79520563 + L1MC2 LINE L1 1283 2190 -4751 * 927 226 84 70 chr15 21859954 21860440 -79520081 + L1MC2 LINE L1 3252 3744 -3197 424 277 0 0 chr15 21860443 21860537 -79519984 + L1MC2 LINE L1 4524 4617 -2324 5507 185 53 50 chr15 21860541 21862888 -79517633 + L1MC2 LINE L1 4678 7017 -122 2129 97 7 0 chr15 21862888 21863166 -79517355 + AluSp SINE Alu 1 280 -33 252 0 0 0 chr15 21863168 21863196 -79517325 + (CAAA)n Simple_repeat Simple_repeat 1 28 0 5507 185 53 50 chr15 21863196 21863323 -79517198 + L1MC2 LINE L1 7017 7139 0 1255 249 50 38 chr15 21863321 21863904 -79516617 + L1M4 LINE L1 2933 3522 -2624 * 344 250 56 62 chr15 21863897 21864041 -79516480 + L1ME1 LINE L1 5851 5993 -173 * 216 250 0 0 chr15 21864169 21864217 -79516304 + MIR SINE MIR 86 133 -129 1362 133 73 4 chr15 21865228 21865476 -79515045 - L1MA5 LINE L1 0 6300 6036 339 25 0 0 chr15 21865495 21865535 -79514986 + (TA)n Simple_repeat Simple_repeat 2 41 0 289 348 37 15 chr15 21865810 21865945 -79514576 - MIR SINE MIR -90 172 35 735 256 26 30 chr15 21866222 21866407 -79514114 + MIR SINE MIR 11 196 -66 2020 96 52 4 chr15 21866407 21866677 -79513844 - AluSc SINE Alu -26 283 1 735 256 26 30 chr15 21866677 21866725 -79513796 + MIR SINE MIR 196 243 -19 398 320 31 8 chr15 21869911 21870039 -79510482 + MIR3 SINE MIR 51 181 -27 241 278 160 11 chr15 21870560 21870693 -79509828 + MIR SINE MIR 36 188 -68 216 300 92 8 chr15 21870776 21870896 -79509625 + MIR SINE MIR 53 182 -80 275 236 164 55 chr15 21872849 21872959 -79507562 + L2 LINE L2 3192 3313 0 3133 248 49 42 chr15 21873270 21874469 -79506052 + L1MC4 LINE L1 2724 3931 -2215 2390 227 73 61 chr15 21874575 21875383 -79505138 + L1MC4 LINE L1 4362 4696 -1450 2341 100 3 3 chr15 21875383 21875693 -79504828 + AluY SINE Alu 1 310 -1 2390 227 73 61 chr15 21875693 21876400 -79504121 + L1MC4 LINE L1 4696 5393 -753 359 262 37 47 chr15 21876420 21876527 -79503994 - MER5A DNA MER1_type -68 121 16 487 273 51 23 chr15 21876874 21877050 -79503471 + MIR SINE MIR 82 262 0 729 178 0 0 chr15 21877590 21877697 -79502824 - AluJb SINE Alu -69 243 137 1167 186 0 0 chr15 21877777 21877970 -79502551 - MER3 DNA MER1_type -6 203 11 2098 165 143 16 chr15 21880617 21881065 -79499456 + MLT1D LTR MaLR 1 505 0 218 240 0 60 chr15 21881284 21881334 -79499187 + MIR SINE MIR 27 73 -135 491 174 24 30 chr15 21881756 21881923 -79498598 + GA-rich Low_complexity Low_complexity 4 169 0 728 98 0 72 chr15 21881925 21882118 -79498403 + (GGAA)n Simple_repeat Simple_repeat 2 180 0 521 179 14 14 chr15 21882119 21882259 -79498262 + GA-rich Low_complexity Low_complexity 2 141 0 1811 168 153 32 chr15 21883687 21884098 -79496423 + LOR1b LTR ERV1 1 461 0 2665 104 0 57 chr15 21886264 21886647 -79493874 + THE1B LTR MaLR 4 364 0 1505 136 13 88 chr15 21886679 21886996 -79493525 + L1MA10 LINE L1 6040 6332 -2 276 100 0 0 chr15 21887331 21887371 -79493150 + (TG)n Simple_repeat Simple_repeat 1 40 0 21 36 0 0 chr15 21887448 21887476 -79493045 + AT_rich Low_complexity Low_complexity 1 28 0 3038 261 52 37 chr15 21888458 21889257 -79491264 - L2 LINE L2 0 3313 2496 1531 168 53 43 chr15 21889257 21889560 -79490961 - AluJo SINE Alu -6 306 1 3038 261 52 37 chr15 21889560 21890055 -79490466 - L2 LINE L2 -817 2496 2010 232 248 37 55 chr15 21890180 21890289 -79490232 - MIR SINE MIR -54 208 102 2612 50 0 0 chr15 21890289 21890592 -79489929 + AluY SINE Alu 1 303 -8 534 222 85 85 chr15 21890993 21891241 -79489280 + MIR SINE MIR 2 249 -13 615 239 56 0 chr15 21892462 21892642 -79487879 + HAL1 LINE L1 44 233 -2274 3259 239 109 68 chr15 21892706 21893577 -79486944 + HAL1 LINE L1 644 1478 -1029 2201 119 0 6 chr15 21893577 21893888 -79486633 + AluSc SINE Alu 1 309 0 3259 239 109 68 chr15 21893888 21894602 -79485919 + HAL1 LINE L1 1478 2313 -194 1990 150 0 0 chr15 21894602 21894902 -79485619 + AluSp SINE Alu 1 300 -13 3259 239 109 68 chr15 21894902 21895106 -79485415 + HAL1 LINE L1 2313 2507 0 812 274 4 35 chr15 21895465 21895724 -79484797 + L1MB8 LINE L1 5925 6175 -3 2701 42 0 0 chr15 21896356 21896667 -79483854 - AluY SINE Alu 0 311 1 298 333 0 0 chr15 21897074 21897233 -79483288 + (CATCC)n Simple_repeat Simple_repeat 3 161 0 197 320 156 29 chr15 21897379 21897623 -79482898 + L2 LINE L2 1638 1912 -1402 270 364 128 17 chr15 21897849 21898209 -79482312 + L2 LINE L2 2290 2689 -625 219 319 52 44 chr15 21898537 21898672 -79481849 + L2 LINE L2 2948 3083 -189 2592 65 0 0 chr15 21898781 21899091 -79481430 - AluY SINE Alu -1 310 1 3839 168 18 3 chr15 21950305 21951408 -79429113 + L1PBa LINE L1 2172 3349 -3513 1677 201 65 56 chr15 21952681 21953129 -79427392 + MLT1D LTR MaLR 54 505 0 286 211 0 13 chr15 21953869 21953945 -79426576 - L1ME4a LINE L1 0 6121 6047 1585 243 81 26 chr15 21954191 21954648 -79425873 - MLT1J LTR MaLR -25 486 5 1146 190 164 0 chr15 21955299 21955811 -79424710 + L1MC4 LINE L1 7414 8037 -5 5417 48 1 0 chr15 21956717 21957400 -79423121 - L1P LINE L1 -893 5253 4570 4422 41 5 2 chr15 21957399 21957954 -79422567 + L1P LINE L1 3242 3798 -2348 * 266 322 33 0 chr15 21958059 21958149 -79422372 + MLT1L LTR MaLR 299 391 -224 2988 135 9 2 chr15 21959099 21959530 -79420991 - MER57B LTR ERV1 0 434 1 1541 108 129 0 chr15 21959531 21959763 -79420758 - MER57B-int LTR ERV1 -2 7535 7274 748 144 24 8 chr15 21959763 21959888 -79420633 - LTR54B LTR ERV1 -369 129 3 2946 94 3 0 chr15 21960335 21960698 -79419823 + THE1B LTR MaLR 1 364 0 670 257 19 27 chr15 21960894 21961151 -79419370 - L1M4 LINE L1 -3016 3130 2876 553 217 63 57 chr15 21961332 21961507 -79419014 - MER5B DNA MER1_type 0 178 3 566 263 27 21 chr15 21963207 21963393 -79417128 + MLT1A1 LTR MaLR 179 365 0 324 260 48 10 chr15 21963393 21963497 -79417024 + MIR SINE MIR 155 262 0 4605 236 35 22 chr15 21964666 21965162 -79415359 + L1MB3 LINE L1 3056 3544 -2602 2229 91 10 0 chr15 21965162 21965458 -79415063 - AluY SINE Alu -12 299 1 4605 236 35 22 chr15 21965458 21966353 -79414168 + L1MB3 LINE L1 3544 4464 -1682 508 143 0 0 chr15 21966512 21966582 -79413939 - AluSq/x SINE Alu -197 116 47 587 128 0 11 chr15 21966915 21967009 -79413512 - LTR12 LTR ERV1 -4 710 618 368 159 0 0 chr15 21967019 21967088 -79413433 - LTR30 LTR ERV1 -102 620 552 758 152 15 28 chr15 21967204 21967360 -79413161 - LTR12 LTR ERV1 -480 1683 94 247 250 0 0 chr15 21967364 21967416 -79413105 - LTR30 LTR ERV1 -670 52 1 388 295 83 26 chr15 21967632 21967825 -79412696 + L2 LINE L2 1849 2052 -1262 433 330 77 0 chr15 21968478 21968660 -79411861 + MIR SINE MIR 2 197 -65 392 124 21 103 chr15 21968665 21968762 -79411759 - LOR1a LTR ERV1 0 497 409 234 0 0 0 chr15 21968762 21968788 -79411733 + (T)n Simple_repeat Simple_repeat 1 26 0 1366 216 77 61 chr15 21970196 21970640 -79409881 - MLT1C LTR MaLR -5 462 12 1247 237 158 54 chr15 21971248 21971806 -79408715 + MLT1E3 LTR MaLR 9 624 0 2071 178 31 3 chr15 21972343 21972698 -79407823 - MLT1A1 LTR MaLR 0 365 1 4820 180 24 30 chr15 21973171 21974059 -79406462 + L1MB3 LINE L1 4442 5333 -850 2528 66 0 3 chr15 21974059 21974361 -79406160 + AluY SINE Alu 1 301 -10 4820 180 24 30 chr15 21974361 21975207 -79405314 + L1MB3 LINE L1 5333 6183 0 1050 241 63 62 chr15 21978072 21978313 -79402208 + L1MEc LINE L1 2087 2326 -3889 2745 197 12 59 chr15 21978313 21978978 -79401543 - LTR27 LTR ERV1 0 636 3 1050 241 63 62 chr15 21978978 21979485 -79401036 + L1MEc LINE L1 2326 2885 -3330 5842 130 15 29 chr15 21979587 21979985 -79400536 - L1PB1 LINE L1 -1 6150 5748 369 109 0 0 chr15 21979985 21980040 -79400481 + (TCTA)n Simple_repeat Simple_repeat 3 57 0 5842 130 15 29 chr15 21980040 21980874 -79399647 - L1PB1 LINE L1 -403 5748 4934 3852 217 24 18 chr15 21980889 21981879 -79398642 - L1M4 LINE L1 -743 5403 4435 1821 153 7 17 chr15 21981879 21982180 -79398341 - AluJo SINE Alu -14 298 1 3852 217 24 18 chr15 21982180 21982250 -79398271 - L1M4 LINE L1 -1711 4435 4367 400 233 107 0 chr15 21982587 21982690 -79397831 + MER53 DNA DNA 1 114 -75 489 126 0 135 chr15 21983502 21983613 -79396908 - L1MA6 LINE L1 -317 5983 5888 1484 178 16 42 chr15 21983613 21983798 -79396723 + L1MA6 LINE L1 5993 6168 -132 2390 95 0 0 chr15 21983798 21984102 -79396419 + AluSc SINE Alu 1 304 -5 1484 178 16 42 chr15 21984102 21984225 -79396296 + L1MA6 LINE L1 6168 6293 -7 288 272 107 19 chr15 21984382 21984485 -79396036 + L2 LINE L2 3198 3309 -4 2479 74 0 0 chr15 21984511 21984807 -79395714 + AluY SINE Alu 1 296 -15 202 182 0 0 chr15 21984817 21984850 -79395671 + (CA)n Simple_repeat Simple_repeat 2 34 0 1678 188 3 25 chr15 21985717 21986036 -79394485 + AluJo SINE Alu 1 312 0 2334 162 17 2 chr15 21986308 21986715 -79393806 + L1MC3 LINE L1 6686 7098 -687 234 231 19 0 chr15 21986716 21986768 -79393753 + MLT1F1 LTR MaLR 37 89 -478 194 329 25 13 chr15 21987259 21987338 -79393183 - L2 LINE L2 -3 3269 3190 3091 155 53 87 chr15 21987338 21988049 -79392472 + L1M4c LINE L1 12 698 -5686 283 65 43 22 chr15 21988072 21988118 -79392403 + AluSq/x SINE Alu 89 135 -168 2388 80 3 3 chr15 21988118 21988419 -79392102 + AluY SINE Alu 1 301 -10 1910 121 26 42 chr15 21988428 21988734 -79391787 + AluSx SINE Alu 2 302 -10 7208 153 21 17 chr15 21988734 21990057 -79390464 + L1M4c LINE L1 892 2219 -4165 2943 153 45 60 chr15 21990162 21990361 -79390160 - L1MA9 LINE L1 -314 5998 5797 1430 176 0 8 chr15 21990361 21990599 -79389922 + MER46A DNA MER2_type 1 236 0 2943 153 45 60 chr15 21990599 21990612 -79389909 - L1MA9 LINE L1 -515 5797 5785 2251 108 0 10 chr15 21990612 21990926 -79389595 - AluY SINE Alu 0 311 1 2943 153 45 60 chr15 21990926 21991231 -79389290 - L1MA9 LINE L1 -527 5785 5489 2287 85 7 3 chr15 21991231 21991526 -79388995 - AluSq SINE Alu -17 296 1 2943 153 45 60 chr15 21991526 21991634 -79388887 - L1MA9 LINE L1 -823 5489 5381 394 272 76 25 chr15 21992195 21992353 -79388168 - MLT1K LTR MaLR -26 562 397 1228 226 6 21 chr15 21992490 21992828 -79387693 - L1MA9 LINE L1 -745 5401 5095 * 6118 251 70 31 chr15 21992816 21995504 -79385017 - L1M4b LINE L1 -1754 5203 2480 1726 241 85 56 chr15 21995664 21996878 -79383643 - L1M4b LINE L1 -4536 2423 1205 261 188 42 0 chr15 21997078 21997126 -79383395 - L1M4b LINE L1 -5632 1227 1178 2880 264 50 39 chr15 21997298 21998277 -79382244 - L1M4b LINE L1 -5635 1224 11 1685 155 83 44 chr15 21998287 21998649 -79381872 + LOR1b LTR ERV1 1 376 -85 2268 98 3 3 chr15 21998651 21998958 -79381563 + AluY SINE Alu 1 307 -4 21 57 0 0 chr15 21999156 21999191 -79381330 + AT_rich Low_complexity Low_complexity 1 35 0 1624 151 0 0 chr15 21999193 21999432 -79381089 + AluY SINE Alu 1 239 -72 1806 87 56 12 chr15 22000500 22000752 -79379769 + AluSg SINE Alu 32 294 -16 2840 105 11 3 chr15 22000790 22001162 -79379359 - THE1C LTR MaLR 0 375 1 183 361 148 0 chr15 22003109 22003231 -79377290 + L3 LINE CR1 1150 1289 -288 244 257 142 26 chr15 22003290 22003403 -79377118 - MIR SINE MIR -62 200 75 6653 67 1 2 chr15 22003458 22004307 -79376214 - L1PA8 LINE L1 -4 6168 5321 2950 115 2 2 chr15 22004305 22004747 -79375774 + L1P LINE L1 4917 5358 -788 * 1855 208 79 24 chr15 22004964 22005420 -79375101 - MLT1D LTR MaLR 0 505 25 1112 264 35 9 chr15 22006865 22007180 -79373341 + MER46C DNA MER2_type 15 337 -1 409 185 76 0 chr15 22009314 22009406 -79371115 - MER53 DNA DNA -74 115 17 * 426 131 107 0 chr15 22009328 22009412 -79371109 + MER53 DNA DNA 96 188 -1 1860 117 15 0 chr15 22009897 22010170 -79370351 - AluSc SINE Alu -16 293 17 315 204 114 0 chr15 22010669 22010757 -79369764 - MIR SINE MIR -48 214 117 410 154 13 0 chr15 22010804 22010882 -79369639 + (CA)n Simple_repeat Simple_repeat 2 80 0 180 114 171 0 chr15 22011440 22011475 -79369046 + L3 LINE CR1 1360 1400 -177 216 288 0 17 chr15 22011603 22011662 -79368859 + L2 LINE L2 2232 2289 -1025 2077 123 18 24 chr15 22012235 22012337 -79368184 - L1MA5A LINE L1 -6 6291 6190 5438 63 17 5 chr15 22012337 22012989 -79367532 - PABL_A LTR ERV1 0 660 1 2077 123 18 24 chr15 22012989 22013220 -79367301 - L1MA5A LINE L1 -107 6190 5960 652 194 0 0 chr15 22013229 22013337 -79367184 - AluSc SINE Alu -53 256 149 1205 123 4 111 chr15 22013337 22013502 -79367019 - L1MA5A LINE L1 -325 5972 5842 1729 191 0 10 chr15 22013502 22013801 -79366720 - AluJb SINE Alu -16 296 1 1205 123 4 111 chr15 22013801 22013887 -79366634 - L1MA5A LINE L1 -455 5842 5748 1314 241 70 47 chr15 22013954 22014381 -79366140 + L2 LINE L2 2310 2746 -568 227 230 40 14 chr15 22014388 22014462 -79366059 - MLT1I LTR MaLR -5 404 329 265 254 32 0 chr15 22014725 22014788 -79365733 + L2 LINE L2 2729 2793 -521 2037 184 62 14 chr15 22014882 22015317 -79365204 - L1MD2 LINE L1 -2 6357 5902 405 145 48 48 chr15 22016235 22016309 -79364212 + MLT1A1 LTR MaLR 1 74 -291 667 165 0 0 chr15 22016309 22016412 -79364109 + MER46A DNA MER2_type 2 104 -132 1226 169 0 60 chr15 22016412 22016678 -79363843 + L1MA4 LINE L1 5614 5863 -437 834 117 73 29 chr15 22016678 22016815 -79363706 + MER46A DNA MER2_type 94 236 0 * 1687 178 3 20 chr15 22016815 22017118 -79363403 + MLT1A1 LTR MaLR 68 365 0 308 283 0 38 chr15 22017118 22017224 -79363297 + MER5B DNA MER1_type 77 178 0 317 331 80 0 chr15 22018863 22019014 -79361507 - MIR SINE MIR -10 252 90 2275 76 13 10 chr15 22019162 22019466 -79361055 + AluSq SINE Alu 1 305 -8 5068 124 11 0 chr15 22019659 22020386 -79360135 - L1MA5A LINE L1 -11 6286 5552 199 221 257 18 chr15 22020521 22020634 -79359887 + MER5A DNA MER1_type 48 187 -2 * 459 204 10 10 chr15 22020542 22020645 -79359876 - MER5A DNA MER1_type -80 109 7 1124 163 5 0 chr15 22020763 22020947 -79359574 + MLT1C LTR MaLR 1 185 -282 2156 99 3 13 chr15 22020947 22021250 -79359271 + AluSg SINE Alu 1 300 -10 270 256 12 12 chr15 22022376 22022458 -79358063 + (TATATG)n Simple_repeat Simple_repeat 5 86 0 191 309 0 0 chr15 22022702 22022757 -79357764 - MIR3 SINE MIR -40 168 114 420 210 86 74 chr15 22023137 22023299 -79357222 - MER5B DNA MER1_type -14 164 1 211 239 80 0 chr15 22024502 22024615 -79355906 + (TCTA)n Simple_repeat Simple_repeat 2 123 0 24 0 0 0 chr15 22024904 22024928 -79355593 + AT_rich Low_complexity Low_complexity 1 24 0 2307 113 0 3 chr15 22025240 22025551 -79354970 + AluSx SINE Alu 1 310 -2 6794 26 1 0 chr15 22026107 22026847 -79353674 + L1PA5 LINE L1 5414 6154 0 1008 247 145 41 chr15 22027007 22027192 -79353329 - L1MC4a LINE L1 -1873 5935 5771 2150 111 7 0 chr15 22027192 22027480 -79353041 - AluSc SINE Alu -19 290 1 1008 247 145 41 chr15 22027480 22027906 -79352615 - L1MC4a LINE L1 -2037 5771 5260 384 327 151 16 chr15 22027926 22028244 -79352277 - L1MC4a LINE L1 -906 5240 4880 1574 224 63 104 chr15 22028273 22028859 -79351662 + MLT1E LTR MaLR 32 593 0 333 274 107 57 chr15 22028881 22029162 -79351359 - L1MC4a LINE L1 -1299 4847 4553 230 286 51 78 chr15 22029447 22029664 -79350857 - L1MC4a LINE L1 -2254 3892 3682 234 39 0 78 chr15 22029809 22029860 -79350661 + (TTTTC)n Simple_repeat Simple_repeat 3 49 0 2326 109 3 0 chr15 22029941 22030253 -79350268 + AluSq SINE Alu 1 313 0 21 82 0 0 chr15 22030516 22030565 -79349956 + AT_rich Low_complexity Low_complexity 1 49 0 282 94 47 0 chr15 22031274 22031338 -79349183 + (TA)n Simple_repeat Simple_repeat 2 68 0 2333 66 0 7 chr15 22031341 22031629 -79348892 - AluSc SINE Alu -23 286 1 21 36 0 0 chr15 22031734 22031762 -79348759 + AT_rich Low_complexity Low_complexity 1 28 0 1792 97 0 8 chr15 22032085 22032322 -79348199 - AluSg/x SINE Alu 0 312 78 303 325 46 31 chr15 22032645 22032839 -79347682 - HAL1b LINE L1 -1100 248 52 554 260 39 15 chr15 22033541 22033759 -79346762 + MLT1E-int LTR MaLR 125 465 -906 2133 96 0 0 chr15 22033925 22034197 -79346324 + AluSc SINE Alu 1 272 -37 180 0 0 0 chr15 22034202 22034222 -79346299 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 29 47 0 0 chr15 22034620 22034663 -79345858 + AT_rich Low_complexity Low_complexity 1 43 0 210 143 0 0 chr15 22034688 22034723 -79345798 + (GGAA)n Simple_repeat Simple_repeat 3 37 0 184 333 171 0 chr15 22034877 22035000 -79345521 + MIR SINE MIR 50 193 -69 209 228 51 51 chr15 22035518 22035597 -79344924 + MER5B DNA MER1_type 95 173 -5 1770 228 73 5 chr15 22036311 22036679 -79343842 + MSTD LTR MaLR 4 396 0 2172 99 39 0 chr15 22037049 22037332 -79343189 - AluSx SINE Alu -18 294 1 25 75 0 0 chr15 22037722 22037775 -79342746 + AT_rich Low_complexity Low_complexity 1 53 0 321 351 12 23 chr15 22038457 22038628 -79341893 + MIR SINE MIR 37 205 -57 739 213 0 0 chr15 22039243 22039388 -79341133 + MER89-int LTR ERV1 7000 7124 -413 1127 142 139 59 chr15 22039388 22039817 -79340704 + LTR54B LTR ERV1 1 496 -2 289 0 49 0 chr15 22040103 22040144 -79340377 + (TTTG)n Simple_repeat Simple_repeat 2 44 0 2044 129 0 0 chr15 22040145 22040425 -79340096 - AluSx SINE Alu -32 280 1 477 220 47 27 chr15 22040461 22040611 -79339910 + LTR54B-int LTR ERV1 329 481 -7056 386 272 0 0 chr15 22040819 22040900 -79339621 + MER89-int LTR ERV1 2441 2521 -3810 1236 173 36 9 chr15 22040908 22041133 -79339388 - MER46A DNA MER2_type 0 236 6 257 271 0 0 chr15 22041138 22041197 -79339324 + MER89-int LTR ERV1 552 610 -6927 * 360 179 80 27 chr15 22041195 22041307 -79339214 + MER89-int LTR ERV1 712 829 -6708 525 184 117 17 chr15 22041309 22041488 -79339033 + LTR54B LTR ERV1 296 492 -6 445 250 40 32 chr15 22041994 22042118 -79338403 - MLT1I LTR MaLR -204 205 81 481 229 29 0 chr15 22043943 22044048 -79336473 - MLT1I LTR MaLR -8 401 294 2223 107 10 0 chr15 22044379 22044677 -79335844 - AluSx SINE Alu -11 301 1 2198 80 0 11 chr15 22045460 22045776 -79334745 + AluY SINE Alu 1 313 0 195 315 154 15 chr15 22046207 22046337 -79334184 - L2 LINE L2 -7 3306 3159 333 216 84 60 chr15 22046448 22046615 -79333906 + MLT1J1 LTR MaLR 42 212 -234 585 213 24 53 chr15 22046672 22046841 -79333680 + MLT1A2 LTR MaLR 4 167 -207 2405 107 0 0 chr15 22046841 22047151 -79333370 + AluSx SINE Alu 1 310 -2 2111 163 69 15 chr15 22047187 22047591 -79332930 + MSTB LTR MaLR 1 426 0 275 313 131 32 chr15 22047632 22048155 -79332366 + L2 LINE L2 2695 3271 -42 1475 236 35 75 chr15 22048473 22048994 -79331527 - MLT1D LTR MaLR -1 504 5 2155 107 3 7 chr15 22049089 22049380 -79331141 - AluSx SINE Alu -22 290 1 262 337 49 10 chr15 22050744 22050847 -79329674 + MER89-int LTR ERV1 6244 6455 -345 301 248 79 10 chr15 22050847 22050948 -79329573 + HERVL40 LTR ERVL 2758 2865 -172 540 256 8 0 chr15 22050959 22051076 -79329445 + HERVL40 LTR ERVL 5411 5528 -2 318 221 32 11 chr15 22051078 22051173 -79329348 + LTR40a LTR ERVL 1 97 -422 836 244 0 6 chr15 22051173 22051345 -79329176 - FRAM SINE Alu -5 171 1 1147 253 19 41 chr15 22051368 22051736 -79328785 + LTR40b LTR ERVL 102 461 -1 1265 151 0 15 chr15 22052508 22052707 -79327814 - AluSg/x SINE Alu -4 308 113 2563 241 73 11 chr15 22052756 22053371 -79327150 + MER82 DNA MER2_type 1 653 0 233 320 57 33 chr15 22054401 22054523 -79325998 - L2 LINE L2 -10 3262 3138 2019 140 0 32 chr15 22054551 22054865 -79325656 + AluSx SINE Alu 1 304 -8 28 48 0 0 chr15 22055871 22055913 -79324608 + AT_rich Low_complexity Low_complexity 1 42 0 4951 98 62 28 chr15 22056795 22057590 -79322931 - L1PA7 LINE L1 0 6154 5333 192 347 48 60 chr15 22057614 22057633 -79322888 + MIR SINE MIR 81 99 -163 2343 191 65 63 chr15 22057633 22058236 -79322285 - MER77 LTR ERV1 0 605 2 192 347 48 60 chr15 22058236 22058383 -79322138 + MIR SINE MIR 99 245 -17 1676 224 36 50 chr15 22058427 22058868 -79321653 + L1MDa LINE L1 185 619 -5921 270 231 0 0 chr15 22058879 22058931 -79321590 + LTR30 LTR ERV1 1 52 -670 2162 170 13 66 chr15 22058931 22059384 -79321137 + LTR12 LTR ERV1 53 481 -233 492 189 168 35 chr15 22059413 22059556 -79320965 + L1MDa LINE L1 661 822 -5718 762 285 95 3 chr15 22059649 22059954 -79320567 + L1MDa LINE L1 1570 1902 -4638 667 213 158 0 chr15 22060429 22060593 -79319928 - MER3 DNA MER1_type -18 191 2 471 297 22 11 chr15 22061625 22061807 -79318714 - MER5A DNA MER1_type -2 187 4 197 318 47 24 chr15 22061872 22061957 -79318564 + MIR SINE MIR 20 106 -156 202 214 14 14 chr15 22062177 22062247 -79318274 + CT-rich Low_complexity Low_complexity 4 73 0 1208 162 112 35 chr15 22063095 22063354 -79317167 - AluJo SINE Alu -33 279 1 858 136 52 7 chr15 22063540 22063694 -79316827 - L1MA10 LINE L1 0 6334 6174 546 215 0 0 chr15 22063695 22063825 -79316696 + (TG)n Simple_repeat Simple_repeat 2 131 0 770 121 121 0 chr15 22063826 22063958 -79316563 - L1MB1 LINE L1 -23 6166 6019 1571 164 37 3 chr15 22064409 22064708 -79315813 - L1MA9 LINE L1 -10 6302 5994 1805 188 6 11 chr15 22066837 22067188 -79313333 - L1MA7 LINE L1 -152 6139 5791 298 155 216 41 chr15 22067185 22067282 -79313239 + L1MA7 LINE L1 6171 6284 -7 * 360 233 23 108 chr15 22069147 22069323 -79311198 - MER103 DNA DNA -1 165 5 751 205 0 0 chr15 22069394 22069521 -79311000 + FLAM_A SINE Alu 2 128 -5 2192 142 70 28 chr15 22069750 22070180 -79310341 + LTR29 LTR ERV1 1 448 -174 2397 81 3 3 chr15 22070220 22070529 -79309992 + AluY SINE Alu 1 309 -2 1343 165 78 109 chr15 22070568 22071175 -79309346 + MER4C LTR ERV1 1 464 -1 1991 150 35 30 chr15 22072079 22072452 -79308069 + THE1C LTR MaLR 1 375 0 2157 209 25 66 chr15 22072793 22073357 -79307164 + MER87 LTR ERV1 1 541 0 1432 200 118 46 chr15 22073810 22074330 -79306191 + LTR48 LTR ERV1 1 739 -48 21 0 0 0 chr15 22075246 22075267 -79305254 + AT_rich Low_complexity Low_complexity 1 21 0 285 333 34 14 chr15 22075810 22075957 -79304564 - MIR SINE MIR 0 262 113 1683 190 7 0 chr15 22077263 22077542 -79302979 - AluJb SINE Alu -31 281 1 1144 158 0 0 chr15 22077891 22078068 -79302453 + FRAM SINE Alu 1 169 -7 189 0 0 0 chr15 22081271 22081292 -79299229 + (T)n Simple_repeat Simple_repeat 1 21 0 298 155 216 41 chr15 22083310 22083407 -79297114 - L1MA7 LINE L1 -7 6284 6171 * 1805 188 6 11 chr15 22083404 22083755 -79296766 + L1MA7 LINE L1 5791 6139 -152 1641 154 37 0 chr15 22085884 22086182 -79294339 + L1MA9 LINE L1 5994 6302 -10 432 289 20 13 chr15 22087106 22087255 -79293266 + MIR SINE MIR 48 197 -65 2154 64 34 30 chr15 22087765 22088061 -79292460 - AluY SINE Alu -14 297 1 240 344 79 20 chr15 22088631 22088884 -79291637 - L2 LINE L2 -198 3074 2807 1983 123 7 30 chr15 22088933 22089233 -79291288 - AluSg SINE Alu -17 293 1 189 147 0 0 chr15 22091327 22091361 -79289160 + (TTCTCC)n Simple_repeat Simple_repeat 3 36 0 220 137 39 0 chr15 22091401 22091452 -79289069 + CT-rich Low_complexity Low_complexity 2 54 0 351 290 36 22 chr15 22091494 22091632 -79288889 - L2 LINE L2 -7 3265 3126 407 305 31 0 chr15 22091771 22091899 -79288622 - MIR SINE MIR -43 219 88 46 0 0 0 chr15 22092230 22092276 -79288245 + GC_rich Low_complexity Low_complexity 1 46 0 4187 87 1 96 chr15 22092391 22093140 -79287381 + MER57-int LTR ERV1 4009 4686 -2851 3224 180 9 24 chr15 22093140 22093806 -79286715 + LTR8 LTR ERV1 1 656 -35 23 33 0 0 chr15 22093929 22093959 -79286562 + AT_rich Low_complexity Low_complexity 1 30 0 1128 134 6 0 chr15 22093998 22094169 -79286352 - AluSq SINE Alu -19 294 123 761 67 0 0 chr15 22094191 22094296 -79286225 - AluY SINE Alu 0 311 207 891 97 0 0 chr15 22094296 22094409 -79286112 - AluSp SINE Alu -200 113 1 192 330 21 32 chr15 22095413 22095507 -79285014 + MER5A DNA MER1_type 61 153 -36 305 257 77 74 chr15 22096032 22096885 -79283636 - L1MC4 LINE L1 0 8042 7239 1635 174 10 43 chr15 22096885 22097190 -79283331 - AluJo SINE Alu -17 295 1 305 257 77 74 chr15 22097190 22097422 -79283099 - L1MC4 LINE L1 -803 7239 7009 2214 152 26 26 chr15 22097442 22097863 -79282658 + L1MB3 LINE L1 5762 6182 -1 653 246 100 55 chr15 22097880 22098351 -79282170 - MLT1G1 LTR MaLR -28 562 46 953 268 116 11 chr15 22098449 22098804 -79281717 - L1MC4a LINE L1 -870 6938 6547 847 177 0 0 chr15 22098804 22098934 -79281587 + AluJb SINE Alu 1 130 -182 24 0 0 0 chr15 22098934 22098958 -79281563 + AT_rich Low_complexity Low_complexity 1 24 0 434 296 72 58 chr15 22098964 22099342 -79281179 - L1MC4a LINE L1 -1283 6525 6139 413 75 0 15 chr15 22099342 22099409 -79281112 + (CA)n Simple_repeat Simple_repeat 2 67 0 434 296 72 58 chr15 22099409 22099476 -79281045 - L1MC4a LINE L1 -1669 6139 6074 2462 172 19 2 chr15 22100235 22100654 -79279867 + MSTB LTR MaLR 1 426 0 1650 151 155 3 chr15 22101317 22101634 -79278887 + MLT1A1 LTR MaLR 1 365 0 2370 109 0 0 chr15 22101834 22102145 -79278376 - AluSq SINE Alu -2 311 1 199 243 57 0 chr15 22102197 22102267 -79278254 + L2 LINE L2 1949 2022 -1292 1994 119 7 52 chr15 22103333 22103643 -79276878 + AluSq SINE Alu 1 296 -17 268 340 79 20 chr15 22103692 22103945 -79276576 + L2 LINE L2 2807 3074 -198 2327 58 34 20 chr15 22104515 22104810 -79275711 + AluY SINE Alu 1 299 -12 432 289 20 13 chr15 22105320 22105469 -79275052 - MIR SINE MIR -65 197 48 1787 181 17 31 chr15 22106259 22106619 -79273902 + MLT1A1 LTR MaLR 11 365 0 207 176 39 20 chr15 22106628 22106679 -79273842 + GA-rich Low_complexity Low_complexity 4 55 0 288 284 74 29 chr15 22107602 22107743 -79272778 + MIR SINE MIR 13 154 -65 193 160 20 20 chr15 22107753 22107803 -79272718 + (TA)n Simple_repeat Simple_repeat 2 51 0 27077 146 11 19 chr15 22108433 22113439 -79267082 + L1PA10 LINE L1 554 5587 -874 2138 144 49 20 chr15 22113439 22113787 -79266734 - THE1B LTR MaLR -6 358 1 6196 106 9 5 chr15 22113787 22114677 -79265844 + L1PA10 LINE L1 5590 6483 0 1450 141 0 33 chr15 22115130 22115372 -79265149 - AluJb SINE Alu -19 293 60 401 321 42 17 chr15 22115399 22115636 -79264885 - LTR16A1 LTR ERVL -2 455 213 283 287 21 0 chr15 22115857 22115951 -79264570 + MER53 DNA DNA 94 189 0 300 253 107 15 chr15 22116906 22117033 -79263488 - L1MD3 LINE L1 0 7808 7685 304 231 0 0 chr15 22117035 22117087 -79263434 - L1MDa LINE L1 -5887 653 602 1354 229 42 55 chr15 22117168 22117570 -79262951 - L1MDa LINE L1 -6128 412 16 644 246 141 113 chr15 22118217 22118997 -79261524 + L1MC4 LINE L1 7155 7956 -86 1049 235 75 14 chr15 22119014 22119295 -79261226 + MER58B DNA MER1_type 1 298 -43 826 264 164 37 chr15 22119300 22119909 -79260612 + L1ME3A LINE L1 5480 6169 -1 1680 189 0 19 chr15 22119912 22120229 -79260292 + AluJo SINE Alu 1 311 -1 195 245 0 19 chr15 22120317 22120370 -79260151 - MIR SINE MIR -109 153 102 397 325 61 20 chr15 22121288 22121485 -79259036 - MIR SINE MIR -23 239 35 288 57 0 0 chr15 22121554 22121589 -79258932 + U2 snRNA snRNA 2 36 -152 542 86 12 0 chr15 22121704 22121785 -79258736 + (GAAA)n Simple_repeat Simple_repeat 4 85 0 298 147 29 15 chr15 22121780 22121848 -79258673 + G-rich Low_complexity Low_complexity 4 72 0 * 834 149 23 6 chr15 22121839 22122014 -79258507 + GA-rich Low_complexity Low_complexity 1 178 0 2423 164 20 41 chr15 22123523 22123961 -79256560 - MSTB1 LTR MaLR -3 429 1 1515 272 108 20 chr15 22124693 22125405 -79255116 - HERVL40 LTR ERVL -271 5259 4461 913 271 98 46 chr15 22125403 22125791 -79254730 - HERVL40 LTR ERVL -1367 4163 3756 * 896 224 29 0 chr15 22125810 22126015 -79254506 - MER20 DNA MER1_type 0 219 9 319 324 35 35 chr15 22126295 22126440 -79254081 + MIR SINE MIR 20 164 -98 200 260 27 27 chr15 22126871 22126944 -79253577 + GA-rich Low_complexity Low_complexity 6 78 0 21 0 0 0 chr15 22127346 22127367 -79253154 + AT_rich Low_complexity Low_complexity 1 21 0 28 71 0 0 chr15 22127639 22127695 -79252826 + AT_rich Low_complexity Low_complexity 1 56 0 2127 102 0 20 chr15 22127990 22128294 -79252227 + AluSx SINE Alu 1 298 -14 25 0 0 0 chr15 22128782 22128807 -79251714 + AT_rich Low_complexity Low_complexity 1 25 0 1952 112 0 11 chr15 22128807 22129084 -79251437 - AluSx SINE Alu -2 310 37 575 162 0 10 chr15 22129119 22129218 -79251303 + MER4A LTR ERV1 1 98 -566 1722 149 3 72 chr15 22129220 22129589 -79250932 + MER4A LTR ERV1 263 664 0 1365 275 113 45 chr15 22129618 22131194 -79249327 - L1ME3A LINE L1 -223 6016 4335 219 69 0 0 chr15 22131999 22132028 -79248493 + (TC)n Simple_repeat Simple_repeat 2 30 0 275 276 13 40 chr15 22132350 22132426 -79248095 + MIR3 SINE MIR 129 202 -6 485 81 27 0 chr15 22132462 22132536 -79247985 + (GGAA)n Simple_repeat Simple_repeat 1 76 0 1596 105 5 5 chr15 22133264 22133483 -79247038 + AluSg/x SINE Alu 90 308 -4 1410 180 10 39 chr15 22134257 22134568 -79245953 - AluJb SINE Alu -10 302 1 1004 118 0 0 chr15 22134568 22134703 -79245818 - AluSq/x SINE Alu -178 135 1 1457 274 99 16 chr15 22135418 22135925 -79244596 - MLT1H1 LTR MaLR -6 549 1 228 229 33 0 chr15 22136007 22136068 -79244453 + MLT1J LTR MaLR 105 167 -344 189 0 0 0 chr15 22137039 22137060 -79243461 + (A)n Simple_repeat Simple_repeat 1 21 0 286 277 22 51 chr15 22137081 22137218 -79243303 - L1ME3A LINE L1 -4729 1667 1535 591 278 81 19 chr15 22137221 22137430 -79243091 - MER58A DNA MER1_type 0 224 3 226 353 23 15 chr15 22137575 22137708 -79242813 - L1ME3A LINE L1 -4882 1323 1190 1026 88 0 7 chr15 22137740 22137877 -79242644 - AluY SINE Alu -175 136 1 207 240 20 0 chr15 22137906 22137956 -79242565 + MIR SINE MIR 103 153 -109 227 321 55 0 chr15 22137965 22138074 -79242447 - LTR67 LTR ERVL -2 555 441 1919 141 0 0 chr15 22139700 22139977 -79240544 + AluSx SINE Alu 28 304 -8 2430 43 4 0 chr15 22140022 22140303 -79240218 + AluY SINE Alu 1 282 -29 25 0 0 0 chr15 22140310 22140335 -79240186 + AT_rich Low_complexity Low_complexity 1 25 0 1266 111 6 0 chr15 22140374 22140545 -79239976 - AluSq SINE Alu -19 294 123 853 38 0 0 chr15 22140567 22140672 -79239849 - AluY SINE Alu 0 311 207 878 97 0 0 chr15 22140672 22140785 -79239736 - AluSp SINE Alu -200 113 1 3989 188 28 35 chr15 22141383 22142234 -79238287 + L1MB3 LINE L1 5332 6176 -7 466 219 0 48 chr15 22142235 22142340 -79238181 + AluSq SINE Alu 120 219 -94 565 108 49 49 chr15 22142742 22142844 -79237677 + AluSg/x SINE Alu 206 307 -2 1909 152 0 29 chr15 22143278 22143593 -79236928 + AluJb SINE Alu 1 306 -6 2501 63 0 16 chr15 22143593 22143909 -79236612 + AluY SINE Alu 1 311 0 2040 228 23 21 chr15 22145583 22146113 -79234408 + MER74A LTR ERVL 15 545 -13 1630 122 13 4 chr15 22146116 22146395 -79234126 + AluSx SINE Alu 44 324 0 2137 136 0 0 chr15 22147255 22147556 -79232965 - AluSg SINE Alu -9 301 1 324 294 124 90 chr15 22147927 22148079 -79232442 - L1ME3A LINE L1 -5744 461 316 776 255 39 10 chr15 22148079 22148283 -79232238 - MER63A DNA MER1_type 0 210 1 324 294 124 90 chr15 22148283 22148484 -79232037 - L1ME3A LINE L1 -5889 316 96 25 51 0 0 chr15 22148812 22148851 -79231670 + AT_rich Low_complexity Low_complexity 1 39 0 32 43 0 0 chr15 22148879 22148925 -79231596 + AT_rich Low_complexity Low_complexity 1 46 0 1945 154 0 3 chr15 22149119 22149424 -79231097 + AluSx SINE Alu 1 304 -8 2893 136 9 59 chr15 22149852 22150370 -79230151 + LTR12 LTR ERV1 4 478 -236 569 253 89 72 chr15 22151375 22151878 -79228643 + L1M4 LINE L1 2769 3280 -2866 352 217 0 0 chr15 22151904 22151973 -79228548 + AluJ/FLAM SINE Alu 1 69 -233 1449 150 63 8 chr15 22151973 22152227 -79228294 + AluJb SINE Alu 30 297 -15 1188 248 80 30 chr15 22154383 22154823 -79225698 + MLT1C LTR MaLR 6 467 0 490 301 17 23 chr15 22155049 22155222 -79225299 - L1MC/D LINE L1 -2063 5745 5574 1182 133 9 67 chr15 22155620 22155845 -79224676 - L1MB3 LINE L1 -10 6173 5962 22 0 0 0 chr15 22155906 22155928 -79224593 + AT_rich Low_complexity Low_complexity 1 22 0 1207 129 40 0 chr15 22156059 22156261 -79224260 - L1MA8 LINE L1 -7 6284 6075 891 327 87 43 chr15 22156297 22157048 -79223473 - L1MC/D LINE L1 -1339 4807 4002 306 0 0 0 chr15 22157048 22157082 -79223439 + (CA)n Simple_repeat Simple_repeat 2 35 0 891 327 87 43 chr15 22157082 22157293 -79223228 - L1MC/D LINE L1 -2144 4002 3802 799 199 20 165 chr15 22157475 22157826 -79222695 + MER51C LTR ERV1 341 640 0 21 0 0 0 chr15 22158145 22158166 -79222355 + AT_rich Low_complexity Low_complexity 1 21 0 1819 108 100 4 chr15 22158431 22158710 -79221811 - AluSc SINE Alu -3 306 1 416 310 91 44 chr15 22158894 22159300 -79221221 - HAL1b LINE L1 -691 657 233 376 306 46 27 chr15 22159821 22160040 -79220481 - HAL1 LINE L1 -1159 1348 1126 2040 135 10 0 chr15 22160158 22160454 -79220067 - AluSx SINE Alu -13 299 1 243 248 79 30 chr15 22160853 22160954 -79219567 - MIR SINE MIR -50 212 107 342 282 106 37 chr15 22161279 22161524 -79218997 + L1ME LINE L1 5493 5754 -367 6622 176 42 4 chr15 22161798 22163047 -79217474 + L1MC3 LINE L1 5326 6621 -1164 212 147 0 0 chr15 22163047 22163081 -79217440 + (GAAAA)n Simple_repeat Simple_repeat 5 38 0 1265 244 19 4 chr15 22163652 22163923 -79216598 + L1MC3 LINE L1 6594 6868 -917 3027 174 100 60 chr15 22163930 22164303 -79216218 + L1MC3 LINE L1 7019 7376 -409 1846 138 0 31 chr15 22164303 22164594 -79215927 + AluJo SINE Alu 5 286 -26 3027 174 100 60 chr15 22164594 22164950 -79215571 + L1MC3 LINE L1 7376 7777 -8 1972 115 79 55 chr15 22166805 22167171 -79213350 + THE1C LTR MaLR 1 375 0 1925 251 31 36 chr15 22167237 22167815 -79212706 - MER90 LTR ERV1 0 575 1 2594 141 33 0 chr15 22167923 22168313 -79212208 + MER57A LTR ERV1 1 403 0 8291 129 17 10 chr15 22168313 22169568 -79210953 + MER57A-int LTR ERV1 1 1264 -6273 * 8502 156 58 31 chr15 22169553 22171372 -79209149 + MER41-int LTR ERV1 506 3265 -2681 2273 103 3 10 chr15 22171375 22171687 -79208834 + AluSx SINE Alu 1 310 -2 25 0 0 0 chr15 22171687 22171712 -79208809 + AT_rich Low_complexity Low_complexity 1 25 0 2127 102 0 20 chr15 22172199 22172503 -79208018 - AluSx SINE Alu -14 298 1 28 71 0 0 chr15 22172798 22172854 -79207667 + AT_rich Low_complexity Low_complexity 1 56 0 21 0 0 0 chr15 22173126 22173147 -79207374 + AT_rich Low_complexity Low_complexity 1 21 0 183 330 48 10 chr15 22173455 22173558 -79206963 + L2 LINE L2 1846 1952 -1362 319 324 35 35 chr15 22174053 22174198 -79206323 - MIR SINE MIR -98 164 20 896 224 29 0 chr15 22174478 22174683 -79205838 + MER20 DNA MER1_type 9 219 0 821 263 62 53 chr15 22174702 22175040 -79205481 + HERVL40 LTR ERVL 3756 4096 -1434 1526 269 113 22 chr15 22175127 22175799 -79204722 + HERVL40 LTR ERVL 4502 5259 -271 2423 164 20 41 chr15 22176531 22176969 -79203552 + MSTB1 LTR MaLR 1 429 -3 762 156 24 6 chr15 22178475 22178642 -79201879 + CT-rich Low_complexity Low_complexity 1 170 0 298 147 29 15 chr15 22178633 22178701 -79201820 + C-rich Low_complexity Low_complexity 4 72 0 * 509 99 12 0 chr15 22178696 22178777 -79201744 + (TTTC)n Simple_repeat Simple_repeat 4 85 0 307 250 147 49 chr15 22179242 22179426 -79201095 + LTR33A LTR ERVL 310 511 -12 262 226 151 38 chr15 22179494 22179600 -79200921 - L2 LINE L2 -179 3093 2976 960 301 75 31 chr15 22179622 22180325 -79200196 - ERVL LTR ERVL -2662 2334 1713 816 204 0 13 chr15 22180343 22180495 -79200026 + FRAM SINE Alu 3 152 -24 422 288 79 70 chr15 22180610 22181055 -79199466 - ERVL LTR ERVL -4193 1571 1123 528 288 141 0 chr15 22181322 22181485 -79199036 + MER5A DNA MER1_type 4 189 0 585 295 27 13 chr15 22181522 22181769 -79198752 - ERVL LTR ERVL -4969 698 435 24 0 0 0 chr15 22181986 22182010 -79198511 + AT_rich Low_complexity Low_complexity 1 24 0 2166 112 0 0 chr15 22182010 22182295 -79198226 + AluSx SINE Alu 1 285 -27 207 0 0 0 chr15 22182295 22182318 -79198203 + (TTAA)n Simple_repeat Simple_repeat 4 26 0 2155 122 0 10 chr15 22182505 22182809 -79197712 - AluSx SINE Alu -11 301 1 198 0 0 0 chr15 22183405 22183427 -79197094 + (CAAAA)n Simple_repeat Simple_repeat 4 25 0 454 246 64 60 chr15 22183445 22183808 -79196713 - MLT1H LTR MaLR -98 457 32 218 344 22 0 chr15 22183873 22183963 -79196558 + L2 LINE L2 3181 3272 0 2246 91 0 7 chr15 22184527 22184854 -79195667 - AluY SINE Alu 0 311 1 285 252 84 17 chr15 22186271 22186390 -79194131 + L1ME4a LINE L1 5991 6117 -4 1080 160 13 179 chr15 22186628 22187009 -79193512 + L1MC4 LINE L1 6458 6775 -1267 554 237 66 33 chr15 22187026 22187178 -79193343 + MER77 LTR ERV1 41 197 -408 500 226 133 61 chr15 22187230 22187411 -79193110 + MER77 LTR ERV1 177 370 -235 263 283 119 87 chr15 22188196 22188415 -79192106 - L2 LINE L2 0 3272 3047 221 0 35 0 chr15 22188763 22188792 -79191729 + (TA)n Simple_repeat Simple_repeat 2 31 0 425 350 102 39 chr15 22190260 22190797 -79189724 - L2 LINE L2 -1 3271 2703 4078 252 54 16 chr15 22191098 22191971 -79188550 + L1M4 LINE L1 2960 3905 -2241 985 63 87 0 chr15 22191971 22192098 -79188423 + MER85 DNA T2_type 1 138 -1 4078 252 54 16 chr15 22192098 22192583 -79187938 + L1M4 LINE L1 3905 4370 -1776 732 221 21 32 chr15 22193084 22193274 -79187247 + L1 LINE L1 4120 4307 -1839 6127 86 20 1 chr15 22193287 22194159 -79186362 + L1M3e LINE L1 2117 2986 -4579 1853 187 3 0 chr15 22194965 22195270 -79185251 - AluJb SINE Alu -6 306 1 1133 158 0 0 chr15 22195617 22195794 -79184727 + FRAM SINE Alu 1 169 -7 198 0 0 0 chr15 22198996 22199018 -79181503 + (T)n Simple_repeat Simple_repeat 1 22 0 8384 138 26 35 chr15 22199421 22199569 -79180952 - Tigger1 DNA MER2_type 0 2418 2270 2261 129 49 22 chr15 22199569 22199934 -79180587 - THE1C LTR MaLR 0 375 1 8384 138 26 35 chr15 22199934 22200154 -79180367 - Tigger1 DNA MER2_type -148 2270 2049 2043 89 4 4 chr15 22200154 22200425 -79180096 + AluSc SINE Alu 1 271 -38 222 37 0 0 chr15 22200429 22200456 -79180065 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 8384 138 26 35 chr15 22200456 22201499 -79179022 - Tigger1 DNA MER2_type -372 2046 1014 655 226 0 23 chr15 22201502 22201635 -79178886 + FLAM_C SINE Alu 3 132 -1 1595 131 31 8 chr15 22201648 22201907 -79178614 - Tigger1 DNA MER2_type -1918 500 236 7851 127 146 31 chr15 22201910 22203430 -79177091 - pTR5 LTR ERV1 0 2438 744 1358 129 4 98 chr15 22203430 22203694 -79176827 - Tigger1 DNA MER2_type -2178 240 2 21 0 0 0 chr15 22204385 22204406 -79176115 + AT_rich Low_complexity Low_complexity 1 21 0 222 37 0 0 chr15 22205639 22205666 -79174855 + (TC)n Simple_repeat Simple_repeat 2 28 0 203 200 22 0 chr15 22205865 22205910 -79174611 + L2 LINE L2 3227 3272 0 2229 119 0 3 chr15 22206230 22206541 -79173980 + AluSx SINE Alu 3 312 0 375 199 28 21 chr15 22206735 22206876 -79173645 + CT-rich Low_complexity Low_complexity 3 144 0 2057 227 84 23 chr15 22207014 22207612 -79172909 - MER92B LTR ERV1 -1 635 2 476 297 31 0 chr15 22208088 22208216 -79172305 + MIR SINE MIR 88 219 -43 343 290 36 22 chr15 22208355 22208493 -79172028 + L2 LINE L2 3126 3265 -7 199 157 39 0 chr15 22208535 22208586 -79171935 + GA-rich Low_complexity Low_complexity 2 54 0 189 147 0 0 chr15 22208626 22208660 -79171861 + (GGAGAA)n Simple_repeat Simple_repeat 3 36 0 2103 119 0 55 chr15 22210754 22211082 -79169439 + AluSg SINE Alu 1 310 0 210 37 0 0 chr15 22212252 22212279 -79168242 + (CAAAAA)n Simple_repeat Simple_repeat 4 30 0 1961 127 48 3 chr15 22212504 22212795 -79167726 - AluSx SINE Alu -8 304 1 2388 75 20 3 chr15 22213816 22214122 -79166399 - AluY SINE Alu 0 311 1 1493 160 30 15 chr15 22214122 22214385 -79166136 - AluJo SINE Alu -17 295 29 3814 137 79 12 chr15 22214583 22215225 -79165296 + LTR12 LTR ERV1 1 685 -3 1575 148 33 30 chr15 22215554 22215825 -79164696 + AluJb SINE Alu 16 287 -25 2376 156 47 5 chr15 22215984 22216407 -79164114 + L1PA14 LINE L1 5721 6161 0 34 0 0 0 chr15 22216421 22216455 -79164066 + AT_rich Low_complexity Low_complexity 1 34 0 1105 158 98 24 chr15 22216488 22216785 -79163736 + MER33 DNA MER1_type 6 324 0 629 275 48 37 chr15 22217018 22217274 -79163247 - MLT2F LTR ERVL -9 654 396 929 236 11 0 chr15 22217274 22217456 -79163065 - MER63A DNA MER1_type 0 210 27 1534 261 20 23 chr15 22217482 22217881 -79162640 - MLT2F LTR ERVL -265 398 1 348 296 83 0 chr15 22217896 22218028 -79162493 - MIR SINE MIR -109 153 11 7455 132 14 6 chr15 22218043 22220278 -79160243 + L1MA2 LINE L1 4048 6303 -1 33 0 0 0 chr15 22220279 22220312 -79160209 + AT_rich Low_complexity Low_complexity 1 33 0 1842 140 60 3 chr15 22220531 22220816 -79159705 + AluSx SINE Alu 1 301 -11 1467 182 64 10 chr15 22221690 22221986 -79158535 + AluJo SINE Alu 1 312 0 1106 239 95 21 chr15 22222839 22223103 -79157418 - L1M4 LINE L1 -920 5226 4918 186 43 0 0 chr15 22223103 22223126 -79157395 + (CA)n Simple_repeat Simple_repeat 2 24 0 1106 239 95 21 chr15 22223126 22223284 -79157237 - L1M4 LINE L1 -1228 4918 4773 260 357 18 52 chr15 22223292 22223620 -79156901 - L1MCc LINE L1 -6088 335 19 2407 149 45 12 chr15 22223850 22224306 -79156215 + Tigger2 DNA MER2_type 1 2717 -1 1798 173 36 15 chr15 22224599 22224935 -79155586 - MER2 DNA MER2_type -1 343 1 1689 127 0 4 chr15 22225359 22225596 -79154925 + AluSq SINE Alu 1 236 -77 23 0 0 0 chr15 22225607 22225630 -79154891 + AT_rich Low_complexity Low_complexity 1 23 0 1843 156 0 21 chr15 22225822 22226110 -79154411 + AluJo SINE Alu 1 282 -30 1434 205 79 3 chr15 22226229 22226532 -79153989 + MLT1E2 LTR MaLR 135 460 -166 516 167 21 10 chr15 22226532 22226628 -79153893 + MER4A LTR ERV1 2 98 -566 * 1718 168 11 19 chr15 22226624 22226976 -79153545 + MER4A LTR ERV1 257 664 0 641 239 38 0 chr15 22226977 22227136 -79153385 + MLT1E2 LTR MaLR 459 623 -1 780 254 152 72 chr15 22228032 22228482 -79152039 + MER34C LTR ERV1 4 505 -80 2040 128 3 13 chr15 22228482 22228780 -79151741 - AluSx SINE Alu -15 297 3 780 254 152 72 chr15 22228780 22228868 -79151653 + MER34C LTR ERV1 505 585 0 1168 88 6 50 chr15 22228893 22229074 -79151447 + MER4A LTR ERV1 1 173 -491 1691 94 5 0 chr15 22229083 22229306 -79151215 + MER4E LTR ERV1 3 226 -553 1168 88 6 50 chr15 22229337 22229518 -79151003 + MER4A LTR ERV1 1 173 -491 5087 122 14 38 chr15 22229527 22229988 -79150533 + MER4E LTR ERV1 3 473 -306 1094 23 8 0 chr15 22229988 22230121 -79150400 + (TTTC)n Simple_repeat Simple_repeat 3 136 0 1927 101 26 4 chr15 22230130 22230398 -79150123 - AluSx SINE Alu -38 274 1 5087 122 14 38 chr15 22230398 22230722 -79149799 + MER4E LTR ERV1 481 779 0 2005 138 72 52 chr15 22230726 22231131 -79149390 + MER4A LTR ERV1 252 664 0 2369 92 3 19 chr15 22232052 22232369 -79148152 + AluSq SINE Alu 2 313 0 572 230 7 7 chr15 22232386 22232521 -79148000 + FAM SINE Alu 1 135 -50 338 256 54 14 chr15 22232623 22232807 -79147714 - MER34 LTR ERV1 -3 746 447 242 196 37 93 chr15 22232835 22232871 -79147650 - LTR48 LTR ERV1 -301 486 450 3207 188 21 65 chr15 22232871 22233594 -79146927 + LTR8 LTR ERV1 1 691 0 242 196 37 93 chr15 22233594 22233664 -79146857 - LTR48 LTR ERV1 -337 450 386 1247 103 11 0 chr15 22233664 22233838 -79146683 + MER41B LTR ERV1 1 176 -459 2180 94 0 10 chr15 22233839 22234167 -79146354 + AluY SINE Alu 1 311 0 192 344 22 0 chr15 22234729 22234819 -79145702 - L2 LINE L2 0 3272 3181 451 238 72 68 chr15 22234884 22235247 -79145274 + MLT1H LTR MaLR 32 457 -98 198 0 0 0 chr15 22235265 22235287 -79145234 + (TTTTG)n Simple_repeat Simple_repeat 4 25 0 2174 122 0 10 chr15 22235883 22236187 -79144334 + AluSx SINE Alu 1 301 -11 207 0 0 0 chr15 22236374 22236397 -79144124 + (TTAA)n Simple_repeat Simple_repeat 3 25 0 2186 112 0 0 chr15 22236397 22236682 -79143839 - AluSx SINE Alu -27 285 1 24 0 0 0 chr15 22236682 22236706 -79143815 + AT_rich Low_complexity Low_complexity 1 24 0 580 295 27 13 chr15 22236923 22237170 -79143351 + ERVL LTR ERVL 435 698 -4969 478 294 141 0 chr15 22237207 22237370 -79143151 - MER5A DNA MER1_type 0 189 4 437 287 79 68 chr15 22237638 22238081 -79142440 + ERVL LTR ERVL 1124 1571 -4193 821 204 0 13 chr15 22238196 22238348 -79142173 - FRAM SINE Alu -24 152 3 952 306 81 34 chr15 22238366 22239069 -79141452 + ERVL LTR ERVL 1713 2452 -2662 255 214 129 0 chr15 22239091 22239161 -79141360 + L2 LINE L2 2976 3054 -218 301 261 147 49 chr15 22239265 22239449 -79141072 - LTR33A LTR ERVL -12 511 310 645 0 0 0 chr15 22241488 22241560 -79138961 - tRNA-Glu-GAA tRNA tRNA -3 72 1 2294 94 24 3 chr15 22242177 22242507 -79138014 + L1PA12 LINE L1 5824 6160 -8 569 260 123 10 chr15 22243970 22244174 -79136347 + MLT1J2 LTR MaLR 195 421 -29 920 94 8 0 chr15 22244937 22245065 -79135456 + AluSc SINE Alu 179 307 -2 239 204 37 0 chr15 22245449 22245503 -79135018 - MIR SINE MIR -90 118 63 951 120 15 29 chr15 22245612 22245778 -79134743 - MER41-int LTR ERV1 -3095 2851 1214 318 175 0 0 chr15 22245895 22245952 -79134569 - FAM SINE Alu -3 176 120 327 215 13 0 chr15 22246206 22246285 -79134236 + MER116 DNA Mariner 1 80 0 697 209 44 6 chr15 22246472 22246630 -79133891 - MER69 DNA AcHobo -2343 183 20 2545 127 26 0 chr15 22247225 22247612 -79132909 - MER57A LTR ERV1 -6 397 1 1384 88 156 0 chr15 22247619 22247824 -79132697 - MER57A-int LTR ERV1 -22 7515 7279 815 76 23 38 chr15 22247824 22247955 -79132566 - LTR54B LTR ERV1 -367 131 3 17174 98 30 5 chr15 22247955 22250359 -79130162 - MER57A-int LTR ERV1 -391 7146 4683 4354 116 3 18 chr15 22250359 22250986 -79129535 - LTR8 LTR ERV1 0 691 74 1613 203 65 46 chr15 22300986 22301241 -79079280 - L1 LINE L1 -1296 4850 4580 1894 140 3 56 chr15 22301241 22301562 -79078959 + AluSx SINE Alu 9 312 0 1613 203 65 46 chr15 22301562 22301785 -79078736 - L1 LINE L1 -1566 4580 4363 2125 113 44 19 chr15 22301787 22302151 -79078370 + THE1C LTR MaLR 3 375 0 2491 168 15 50 chr15 22302153 22302222 -79078299 - L1 LINE L1 -1780 4366 4296 1902 189 0 0 chr15 22302222 22302518 -79078003 - AluJb SINE Alu -16 296 1 2491 168 15 50 chr15 22302518 22302587 -79077934 - L1 LINE L1 -1850 4296 4226 276 30 0 0 chr15 22302587 22302620 -79077901 + (TG)n Simple_repeat Simple_repeat 2 34 0 2491 168 15 50 chr15 22302620 22303077 -79077444 - L1 LINE L1 -1920 4226 3791 255 114 0 0 chr15 22303256 22303300 -79077221 + (GA)n Simple_repeat Simple_repeat 1 44 0 252 0 0 0 chr15 22303328 22303356 -79077165 + (GA)n Simple_repeat Simple_repeat 1 28 0 206 32 32 0 chr15 22303464 22303495 -79077026 + (GA)n Simple_repeat Simple_repeat 1 32 0 446 261 125 23 chr15 22303635 22303811 -79076710 - MIR SINE MIR -48 214 21 1538 215 233 30 chr15 22304630 22304694 -79075827 + L1ME1 LINE L1 4471 4521 -1625 2173 112 27 0 chr15 22304694 22304988 -79075533 - AluSp SINE Alu -11 302 1 1538 215 233 30 chr15 22304988 22305336 -79075185 + L1ME1 LINE L1 4521 4797 -1349 2727 75 11 0 chr15 22305336 22305696 -79074825 + THE1B LTR MaLR 1 364 0 1538 215 233 30 chr15 22305696 22305976 -79074545 + L1ME1 LINE L1 4797 5305 -841 718 75 11 0 chr15 22305978 22306072 -79074449 - AluY SINE Alu -12 299 205 2275 257 97 10 chr15 22306073 22306856 -79073665 + L1ME1 LINE L1 5301 6151 -15 409 245 39 0 chr15 22307143 22307245 -79073276 + MER5A DNA MER1_type 4 109 -80 1581 212 87 60 chr15 22309618 22310066 -79070455 + LTR40b LTR ERVL 3 462 0 273 281 21 0 chr15 22310246 22310342 -79070179 - MER5A DNA MER1_type -83 106 9 2095 101 30 0 chr15 22310422 22310718 -79069803 + AluSp SINE Alu 1 305 -8 1815 180 10 57 chr15 22311264 22311669 -79068852 + MLT1B LTR MaLR 1 386 -4 472 300 110 21 chr15 22311684 22311921 -79068600 - L3b LINE CR1 -123 1460 1203 207 0 0 0 chr15 22312411 22312434 -79068087 + (TAAAAA)n Simple_repeat Simple_repeat 2 24 0 215 295 103 0 chr15 22312635 22312713 -79067808 + MER5B DNA MER1_type 9 94 -84 652 149 9 9 chr15 22313203 22313310 -79067211 + MLT1B LTR MaLR 222 328 -62 1712 190 116 52 chr15 22313333 22313585 -79066936 - MER82 DNA MER2_type -221 432 198 2000 122 0 0 chr15 22313585 22313871 -79066650 + AluSx SINE Alu 1 286 -26 372 22 0 0 chr15 22313871 22313916 -79066605 + (CA)n Simple_repeat Simple_repeat 2 46 0 1712 190 116 52 chr15 22313916 22314068 -79066453 - MER82 DNA MER2_type -454 199 1 215 359 13 0 chr15 22314305 22314383 -79066138 + MIR3 SINE MIR 129 207 -1 2899 147 36 32 chr15 22314990 22315380 -79065141 + LTR26B LTR ERV1 1 395 -136 1278 164 285 14 chr15 22315380 22315734 -79064787 - LTR7 LTR ERV1 0 450 1 2899 147 36 32 chr15 22315734 22315872 -79064649 + LTR26B LTR ERV1 395 531 0 255 237 0 34 chr15 22316362 22316421 -79064100 + MIR SINE MIR 170 226 -36 769 161 8 8 chr15 22316513 22316637 -79063884 + FLAM_C SINE Alu 2 125 -18 222 136 0 0 chr15 22317745 22317789 -79062732 + (TTCA)n Simple_repeat Simple_repeat 1 44 0 4562 167 47 8 chr15 22318479 22319323 -79061198 + MER4D LTR ERV1 1 877 -26 302 237 65 79 chr15 22319880 22320019 -79060502 + L1MC4a LINE L1 5868 6004 -1804 2163 163 70 34 chr15 22320088 22320531 -79059990 + LTR2B LTR ERV1 32 490 0 258 308 71 69 chr15 22320962 22321135 -79059386 - MIR SINE MIR -64 198 21 21 0 0 0 chr15 22322424 22322445 -79058076 + AT_rich Low_complexity Low_complexity 1 21 0 527 247 62 75 chr15 22322450 22322888 -79057633 - L1MC5 LINE L1 -53 7908 7477 383 322 70 26 chr15 22323925 22324155 -79056366 - L3 LINE CR1 -869 708 469 1241 211 31 20 chr15 22324157 22324540 -79055981 - L1M3b LINE L1 -4603 1678 1284 1938 119 0 7 chr15 22324547 22324842 -79055679 + AluSg1 SINE Alu 14 306 -3 387 0 0 0 chr15 22324848 22324891 -79055630 + (CA)n Simple_repeat Simple_repeat 2 44 0 926 249 133 72 chr15 22324971 22325336 -79055185 + LTR1B LTR ERV1 56 464 -362 2123 106 3 3 chr15 22325336 22325638 -79054883 - AluSx SINE Alu -10 302 1 926 249 133 72 chr15 22325638 22325799 -79054722 + LTR1B LTR ERV1 464 614 -212 277 242 172 20 chr15 22325879 22325978 -79054543 + LTR28 LTR ERV1 900 1013 -7 1598 170 7 0 chr15 22325985 22326261 -79054260 + AluJb SINE Alu 31 308 -4 198 103 0 0 chr15 22327318 22327347 -79053174 + (CAGG)n Simple_repeat Simple_repeat 3 31 0 283 108 60 5 chr15 22327390 22327448 -79053073 - MLT2B1 LTR ERVL 0 554 462 358 147 35 35 chr15 22327450 22327566 -79052955 + (TAGA)n Simple_repeat Simple_repeat 3 118 0 1369 253 108 7 chr15 22327610 22328065 -79052456 - MLT2B1 LTR ERVL -19 501 1 526 208 23 62 chr15 22328423 22328553 -79051968 - FLAM_C SINE Alu -16 127 3 3395 169 120 2 chr15 22328798 22329430 -79051091 - LTR12 LTR ERV1 -7 707 1 1465 158 12 15 chr15 22330717 22330976 -79049545 + MER2 DNA MER2_type 86 343 -2 21 0 0 0 chr15 22331839 22331860 -79048661 + AT_rich Low_complexity Low_complexity 1 21 0 1221 166 104 68 chr15 22332526 22332804 -79047717 + AluJo SINE Alu 1 288 -24 1679 162 0 17 chr15 22332815 22333141 -79047380 + AluJb SINE Alu 1 321 0 351 0 0 0 chr15 22333174 22333213 -79047308 + (CA)n Simple_repeat Simple_repeat 2 40 0 350 344 56 28 chr15 22333355 22333535 -79046986 - MIR3 SINE MIR -12 196 12 425 309 67 26 chr15 22333676 22333870 -79046651 + MIR3 SINE MIR 6 207 -1 513 316 124 9 chr15 22334186 22334509 -79046012 + L1MEc LINE L1 70 429 -5967 1962 89 33 0 chr15 22334572 22334692 -79045829 + AluSc SINE Alu 1 116 -203 392 0 21 0 chr15 22334692 22334740 -79045781 + (CA)n Simple_repeat Simple_repeat 2 50 0 1962 89 33 0 chr15 22334740 22334929 -79045592 + AluSc SINE Alu 116 319 0 815 259 45 0 chr15 22335066 22335267 -79045254 + MER20 DNA MER1_type 1 210 -9 961 158 7 0 chr15 22335330 22335482 -79045039 + FRAM SINE Alu 1 153 -23 376 172 62 14 chr15 22335482 22335627 -79044894 + (TA)n Simple_repeat Simple_repeat 1 152 0 1994 68 0 0 chr15 22335685 22335936 -79044585 + AluY SINE Alu 45 295 -16 521 186 20 0 chr15 22337280 22337382 -79043139 - MER53 DNA DNA -85 104 1 180 311 40 14 chr15 22337830 22337904 -79042617 - MIR SINE MIR -70 192 117 1728 146 3 20 chr15 22338349 22338644 -79041877 + AluJb SINE Alu 1 290 -22 3119 185 42 5 chr15 22338970 22339614 -79040907 - L1MB7 LINE L1 0 6184 5517 1998 148 0 10 chr15 22339644 22339955 -79040566 + AluSq SINE Alu 1 308 -5 2198 142 60 53 chr15 22340075 22340120 -79040401 - MSTA LTR MaLR 0 428 385 2126 103 0 13 chr15 22340120 22340421 -79040100 + AluSc SINE Alu 1 297 -12 2198 142 60 53 chr15 22340421 22340791 -79039730 - MSTA LTR MaLR -43 385 10 479 281 96 0 chr15 22340851 22341029 -79039492 + MLT1I LTR MaLR 3 197 -212 1170 127 6 0 chr15 22341029 22341202 -79039319 - AluSg/x SINE Alu -15 295 122 522 309 59 0 chr15 22341202 22341406 -79039115 + MLT1I LTR MaLR 194 409 0 417 309 112 27 chr15 22341786 22342009 -79038512 - L2 LINE L2 -155 3117 2876 375 347 60 69 chr15 22342159 22342608 -79037913 - L2 LINE L2 -592 2722 2278 3598 164 20 41 chr15 22343257 22343962 -79036559 + LTR8 LTR ERV1 2 691 0 317 155 35 0 chr15 22344133 22344191 -79036330 - HERV16 LTR ERVL -3086 1910 1851 222 118 0 0 chr15 22344293 22344327 -79036194 + (TAGG)n Simple_repeat Simple_repeat 2 35 0 181 185 56 0 chr15 22344528 22344582 -79035939 + (TATG)n Simple_repeat Simple_repeat 4 60 0 363 115 49 41 chr15 22344923 22345173 -79035348 + (TG)n Simple_repeat Simple_repeat 1 252 0 399 140 47 23 chr15 22345204 22345375 -79035146 + (TG)n Simple_repeat Simple_repeat 1 175 0 270 178 70 4 chr15 22345401 22345653 -79034868 + (TG)n Simple_repeat Simple_repeat 1 268 0 753 206 22 11 chr15 22345963 22346147 -79034374 - MER53 DNA DNA 0 189 4 21 0 0 0 chr15 22346392 22346413 -79034108 + AT_rich Low_complexity Low_complexity 1 21 0 330 216 134 8 chr15 22346958 22347092 -79033429 + L1ME4a LINE L1 5968 6118 -3 544 344 35 53 chr15 22347570 22347945 -79032576 + L1M3d LINE L1 241 608 -5523 1499 234 25 50 chr15 22348108 22348325 -79032196 + L1M3d LINE L1 918 1139 -5002 1894 98 69 0 chr15 22348325 22348599 -79031922 + AluY SINE Alu 1 293 -18 1499 234 25 50 chr15 22348599 22348785 -79031736 + L1M3d LINE L1 1139 1310 -4831 1884 93 23 0 chr15 22348785 22349043 -79031478 + AluSc SINE Alu 32 295 -14 1499 234 25 50 chr15 22349043 22349122 -79031399 + L1M3d LINE L1 1310 1389 -4752 * 4918 142 22 2 chr15 22349097 22350248 -79030273 + L1MA3 LINE L1 4871 6045 -324 824 163 7 20 chr15 22350248 22350401 -79030120 + AluJo SINE Alu 1 151 -161 3073 174 14 0 chr15 22350437 22351154 -79029367 + L1MB2 LINE L1 5051 5780 -391 1371 174 11 43 chr15 22351154 22351436 -79029085 + AluJo SINE Alu 1 273 -39 225 0 0 0 chr15 22351441 22351466 -79029055 + (CAAT)n Simple_repeat Simple_repeat 4 28 0 1825 170 17 47 chr15 22351466 22351872 -79028649 + L1MB2 LINE L1 5778 6171 0 1501 231 85 38 chr15 22352401 22352847 -79027674 - MLT1D LTR MaLR 0 505 39 1201 108 0 0 chr15 22352854 22353021 -79027500 - L1PA16 LINE L1 -229 5937 5771 1771 176 143 38 chr15 22353021 22353442 -79027079 - MLT2B1 LTR ERVL -55 465 1 1064 191 3 95 chr15 22353443 22353536 -79026985 + AluJb SINE Alu 24 124 -188 1482 139 51 70 chr15 22353536 22353852 -79026669 - AluSp SINE Alu -3 310 1 1064 191 3 95 chr15 22353852 22354073 -79026448 + AluJb SINE Alu 124 309 -3 230 200 109 0 chr15 22354326 22354381 -79026140 - MIR SINE MIR -93 169 109 23 0 0 0 chr15 22355662 22355685 -79024836 + AT_rich Low_complexity Low_complexity 1 23 0 537 264 29 23 chr15 22356522 22356696 -79023825 - MER45A DNA AcHobo 0 178 4 713 34 0 0 chr15 22357212 22357300 -79023221 + AluY SINE Alu 216 303 -8 767 49 0 10 chr15 22357314 22357416 -79023105 + AluY SINE Alu 200 300 -11 432 244 76 67 chr15 22357775 22358013 -79022508 + pTR5 LTR ERV1 761 1000 -1438 3206 166 46 58 chr15 22358223 22358918 -79021603 + LTR12 LTR ERV1 1 687 -1 489 226 36 68 chr15 22360014 22360235 -79020286 - LTR37B LTR ERV1 -13 455 242 810 183 131 102 chr15 22360451 22360795 -79019726 + MLT1E2 LTR MaLR 63 416 -210 418 237 67 87 chr15 22360972 22361114 -79019407 + MER112 DNA MER1_type 3 139 -121 1792 183 20 30 chr15 22361114 22361508 -79019013 + MLT1B LTR MaLR 1 390 0 418 237 67 87 chr15 22361508 22361618 -79018903 + MER112 DNA MER1_type 139 250 -10 1335 168 76 42 chr15 22362071 22362333 -79018188 + AluJb SINE Alu 1 271 -41 312 232 40 20 chr15 22362950 22363049 -79017472 - MER5A DNA MER1_type -80 109 9 27 0 0 0 chr15 22363712 22363739 -79016782 + AT_rich Low_complexity Low_complexity 1 27 0 2606 58 0 0 chr15 22363752 22364063 -79016458 - AluY SINE Alu 0 311 1 1507 223 103 5 chr15 22364163 22364562 -79015959 + L1MB2 LINE L1 5692 6129 -42 401 186 52 52 chr15 22364562 22364659 -79015862 + AluJb SINE Alu 32 128 -174 917 197 17 6 chr15 22364768 22364946 -79015575 + AluJb SINE Alu 111 290 -22 306 105 0 0 chr15 22364948 22365005 -79015516 + L1MB3 LINE L1 6127 6183 0 1462 175 18 103 chr15 22365330 22365729 -79014792 - MLT1A1 LTR MaLR 0 365 1 611 67 11 0 chr15 22365938 22366027 -79014494 + (TCTA)n Simple_repeat Simple_repeat 1 90 0 1901 144 0 7 chr15 22366782 22367189 -79013332 - AluSx SINE Alu 0 405 1 1347 65 0 38 chr15 22367569 22367753 -79012768 - AluY SINE Alu -6 305 129 2046 124 47 0 chr15 22367966 22368264 -79012257 + AluSx SINE Alu 1 312 0 216 208 21 0 chr15 22368709 22368757 -79011764 + CT-rich Low_complexity Low_complexity 1 49 0 318 189 27 14 chr15 22370477 22370551 -79009970 - MIR SINE MIR -3 259 185 759 159 164 80 chr15 22370570 22370771 -79009750 - MER20 DNA MER1_type -1 218 1 2721 263 25 22 chr15 22370951 22372207 -79008314 + L1M3c LINE L1 2 1625 -4516 3535 245 36 28 chr15 22372216 22373413 -79007108 + L1MA4 LINE L1 2420 3629 -3936 2251 113 3 0 chr15 22373413 22373715 -79006806 + AluSg SINE Alu 1 303 -7 3535 245 36 28 chr15 22373715 22373759 -79006762 + L1MA4 LINE L1 3629 3671 -3894 372 145 53 0 chr15 22373754 22373830 -79006691 + L1MA4 LINE L1 4379 4458 -3107 * 527 173 39 13 chr15 22374326 22374482 -79006039 + L1MA4 LINE L1 4447 4606 -2959 847 221 94 53 chr15 22374507 22374900 -79005621 - LTR56 LTR ERV1 -10 435 27 3611 185 51 31 chr15 22374960 22376256 -79004265 - LTR56-int LTR ERV1 -101 6005 4505 1679 163 7 24 chr15 22376256 22376581 -79003940 - AluJb SINE Alu 0 312 1 3611 185 51 31 chr15 22376581 22376678 -79003843 - LTR56-int LTR ERV1 -1601 4505 4411 529 170 88 0 chr15 22376688 22376796 -79003725 - LTR49-int LTR ERV1 -5058 1205 1 808 201 91 0 chr15 22376964 22377118 -79003403 - MER21B LTR ERV1 -367 496 329 8638 150 20 31 chr15 22377130 22378146 -79002375 + L1MA4 LINE L1 4620 5646 -2073 9168 167 26 30 chr15 22378146 22378382 -79002139 + L1PA13 LINE L1 3703 3938 -2225 2304 93 0 3 chr15 22378382 22378673 -79001848 + AluY SINE Alu 3 292 -19 9168 167 26 30 chr15 22378673 22380785 -78999736 + L1PA13 LINE L1 3938 6051 -112 3330 114 8 29 chr15 22380785 22381303 -78999218 + MER9 LTR ERVK 1 507 -4 9168 167 26 30 chr15 22381303 22381416 -78999105 + L1PA13 LINE L1 6051 6163 0 8638 150 20 31 chr15 22381416 22381880 -78998641 + L1MA4 LINE L1 5646 6114 -1605 1675 171 7 10 chr15 22381880 22382172 -78998349 - AluJb SINE Alu -21 291 1 8638 150 20 31 chr15 22382172 22382697 -78997824 + L1MA4 LINE L1 6114 6643 -1076 1846 175 3 20 chr15 22382697 22383000 -78997521 + AluJb SINE Alu 5 302 -10 8638 150 20 31 chr15 22383000 22383889 -78996632 + L1MA4 LINE L1 6643 7540 -179 1716 157 3 55 chr15 22383889 22384201 -78996320 + AluJo SINE Alu 3 298 -14 8638 150 20 31 chr15 22384201 22384308 -78996213 + L1MA4 LINE L1 7540 7522 -197 2234 100 0 3 chr15 22384308 22384599 -78995922 - AluSc SINE Alu -19 290 1 8638 150 20 31 chr15 22384599 22384796 -78995725 + L1MA4 LINE L1 7521 7719 0 922 211 14 21 chr15 22384775 22385059 -78995462 + L1 LINE L1 4308 4589 -2976 * 2161 111 3 3 chr15 22386138 22386427 -78994094 + AluSq SINE Alu 5 293 -20 2092 76 0 0 chr15 22387297 22387546 -78992975 + AluY SINE Alu 1 249 -62 2786 192 92 37 chr15 22387756 22388455 -78992066 - Tigger6a DNA MER2_type -2 1081 345 258 349 0 0 chr15 22388455 22388561 -78991960 - L1MEd LINE L1 -1257 4872 4767 223 280 70 30 chr15 22388594 22388694 -78991827 + MIR SINE MIR 36 139 -69 2065 100 10 17 chr15 22388777 22389164 -78991357 + AluSp SINE Alu 3 387 0 1676 172 7 10 chr15 22390273 22390563 -78989958 + AluJo SINE Alu 5 293 -19 2200 95 3 10 chr15 22390621 22390925 -78989596 + AluSq SINE Alu 1 302 -11 677 320 104 19 chr15 22391116 22391654 -78988867 - L1ME3A LINE L1 -213 5957 5374 2357 108 0 0 chr15 22391686 22391992 -78988529 - AluSx SINE Alu -6 306 1 314 44 0 22 chr15 22392241 22392286 -78988235 + (TG)n Simple_repeat Simple_repeat 2 45 0 1552 199 7 3 chr15 22392670 22392957 -78987564 + AluJo SINE Alu 12 299 -13 618 271 88 35 chr15 22392959 22393299 -78987222 - L1MEd LINE L1 -1508 4621 4264 281 298 92 33 chr15 22393306 22393578 -78986943 - L1MEd LINE L1 -1938 4191 3904 396 341 79 40 chr15 22393639 22393818 -78986703 - L1MEd LINE L1 -2439 3690 3520 2236 100 38 0 chr15 22393818 22394107 -78986414 - AluSx SINE Alu -8 304 5 396 341 79 40 chr15 22394107 22394332 -78986189 - L1MEd LINE L1 -2609 3520 3270 1273 201 10 55 chr15 22394592 22394901 -78985620 - AluJb SINE Alu -9 303 9 1362 266 68 30 chr15 22394955 22394972 -78985549 - L1MEd LINE L1 -2953 3176 3161 1924 175 0 9 chr15 22394972 22395287 -78985234 - AluSx SINE Alu 0 312 1 1362 266 68 30 chr15 22395287 22396076 -78984445 - L1MEd LINE L1 -2968 3161 2334 1964 121 50 0 chr15 22396076 22396356 -78984165 - AluSx SINE Alu -8 304 11 1362 266 68 30 chr15 22396356 22396388 -78984133 - L1MEd LINE L1 -3795 2334 2305 290 214 0 57 chr15 22396407 22396477 -78984044 + MIR SINE MIR 111 176 -86 354 330 70 0 chr15 22396491 22396606 -78983915 - L2 LINE L2 -1 3312 3190 282 247 54 43 chr15 22396608 22396701 -78983820 + MIR SINE MIR 169 262 0 1736 169 6 47 chr15 22396862 22397182 -78983339 - AluSx SINE Alu -5 307 1 1041 237 114 17 chr15 22397349 22397825 -78982696 - MLT1G LTR MaLR -3 587 10 288 262 0 0 chr15 22397819 22397880 -78982641 - MLT1G1 LTR MaLR -534 61 1 * 23 33 0 0 chr15 22398055 22398085 -78982436 + AT_rich Low_complexity Low_complexity 1 30 0 737 274 139 51 chr15 22398263 22398756 -78981765 - L1MEd LINE L1 -4862 1257 694 2138 128 3 0 chr15 22398756 22399053 -78981468 - AluSg SINE Alu -12 298 1 737 274 139 51 chr15 22399053 22399343 -78981178 - L1MEd LINE L1 -5425 694 431 1203 244 98 9 chr15 22399795 22400110 -78980411 - MER2 DNA MER2_type 0 345 3 1847 136 14 4 chr15 22402015 22402294 -78978227 - AluSx SINE Alu -30 282 1 3496 152 113 21 chr15 22402776 22403406 -78977115 - LTR12 LTR ERV1 0 688 1 195 269 0 0 chr15 22403511 22403563 -78976958 - L2 LINE L2 -26 3246 3195 1842 188 60 130 chr15 22403792 22404032 -78976489 + MER70B LTR ERVL 5 260 -318 3125 86 19 9 chr15 22404032 22404462 -78976059 - MER57B LTR ERV1 0 434 1 1842 188 60 130 chr15 22404462 22404838 -78975683 + MER70B LTR ERVL 260 578 0 1777 226 20 18 chr15 22405327 22405721 -78974800 - MSTD LTR MaLR -1 395 1 206 333 44 0 chr15 22406293 22406428 -78974093 - L2 LINE L2 -222 3050 2910 2026 125 0 0 chr15 22406494 22406774 -78973747 + AluSx SINE Alu 1 280 -32 217 0 61 0 chr15 22406775 22406808 -78973713 + (CAAAA)n Simple_repeat Simple_repeat 1 35 0 1134 197 4 37 chr15 22407359 22407603 -78972918 - LTR51 LTR ERV1 0 671 436 292 159 0 57 chr15 22407618 22407706 -78972815 + (CATATA)n Simple_repeat Simple_repeat 2 84 0 2217 111 69 62 chr15 22407706 22407889 -78972632 - LTR51 LTR ERV1 -232 439 259 2491 76 3 0 chr15 22407889 22408193 -78972328 + AluY SINE Alu 1 305 -6 2217 111 69 62 chr15 22408193 22408365 -78972156 - LTR51 LTR ERV1 -412 259 78 2086 83 22 70 chr15 22408365 22408678 -78971843 - AluY SINE Alu -13 298 1 2217 111 69 62 chr15 22408678 22408727 -78971794 - LTR51 LTR ERV1 -593 78 31 1656 221 113 82 chr15 22408724 22409231 -78971290 - LTR8 LTR ERV1 -232 461 1 * 2344 183 38 20 chr15 22409253 22409702 -78970819 - LTR32 LTR ERVL 0 471 15 2391 104 10 0 chr15 22410100 22410408 -78970113 - AluSx SINE Alu -1 311 1 421 229 52 100 chr15 22410804 22411020 -78969501 + MER34C LTR ERV1 47 253 -332 4006 96 5 25 chr15 22411020 22411408 -78969113 - MER41A LTR ERV1 0 554 178 2136 95 0 11 chr15 22411408 22411722 -78968799 - AluY SINE Alu 0 311 1 4006 96 5 25 chr15 22411722 22411897 -78968624 - MER41A LTR ERV1 -376 178 1 242 196 37 93 chr15 22411897 22411967 -78968554 + LTR48 LTR ERV1 386 450 -337 421 229 52 100 chr15 22411897 22411911 -78968610 + MER34C LTR ERV1 253 266 -319 3207 188 21 65 chr15 22411967 22412690 -78967831 - LTR8 LTR ERV1 0 691 1 242 196 37 93 chr15 22412690 22412726 -78967795 + LTR48 LTR ERV1 450 486 -301 338 256 54 14 chr15 22412754 22412938 -78967583 + MER34 LTR ERV1 447 539 -3 572 230 7 7 chr15 22413040 22413175 -78967346 - FAM SINE Alu -50 135 1 2399 91 0 19 chr15 22413192 22413510 -78967011 - AluSq SINE Alu 0 313 2 2269 195 5 88 chr15 22414447 22414459 -78966062 + L1MA10 LINE L1 5782 5793 -541 291 54 0 0 chr15 22414459 22414496 -78966025 + (TG)n Simple_repeat Simple_repeat 1 37 0 2269 195 5 88 chr15 22414496 22414851 -78965670 + L1MA10 LINE L1 5793 6082 -252 1743 181 3 3 chr15 22414851 22415150 -78965371 + AluJb SINE Alu 1 299 -13 2269 195 5 88 chr15 22415150 22415381 -78965140 + L1MA10 LINE L1 6082 6331 -3 271 307 187 24 chr15 22415612 22415778 -78964743 + L3 LINE CR1 1034 1226 -351 308 282 24 0 chr15 22416028 22416113 -78964408 + L3 LINE CR1 1054 1140 -437 1499 103 0 0 chr15 22416264 22416459 -78964062 + AluSc SINE Alu 1 195 -114 317 89 0 0 chr15 22416459 22416504 -78964017 + AluSc SINE Alu 254 298 -1 21 0 0 0 chr15 22416537 22416558 -78963963 + AT_rich Low_complexity Low_complexity 1 21 0 324 275 25 8 chr15 22416622 22416742 -78963779 - Tigger8 DNA MER2_type -117 549 428 492 247 95 6 chr15 22416822 22416980 -78963541 - Tigger8 DNA MER2_type -368 298 127 465 272 83 38 chr15 22417138 22417451 -78963070 - L1ME4a LINE L1 -263 5858 5532 1302 101 37 5 chr15 22417485 22417673 -78962848 - AluSg/x SINE Alu -7 305 112 822 104 0 52 chr15 22418175 22418310 -78962211 - FLAM_C SINE Alu -11 132 5 443 245 29 0 chr15 22418320 22418459 -78962062 - MER5A DNA MER1_type 0 189 47 1474 286 169 10 chr15 22418954 22419839 -78960682 + Charlie2a DNA MER1_type 529 1554 -1308 701 211 116 12 chr15 22419839 22420260 -78960261 + Charlie2a DNA MER1_type 2110 2675 -187 186 103 0 0 chr15 22420321 22420350 -78960171 + (CA)n Simple_repeat Simple_repeat 2 30 0 394 237 191 0 chr15 22420358 22420489 -78960032 + Charlie2a DNA MER1_type 1912 2067 -795 281 240 41 16 chr15 22420496 22420617 -78959904 + (TA)n Simple_repeat Simple_repeat 1 124 0 194 128 26 0 chr15 22420633 22420672 -78959849 + (TA)n Simple_repeat Simple_repeat 1 40 0 550 258 26 0 chr15 22420675 22420830 -78959691 + Charlie2a DNA MER1_type 2703 2861 -1 2470 216 93 48 chr15 22421110 22421340 -78959181 - Charlie2 DNA MER1_type -7 2855 2637 1661 192 0 7 chr15 22421340 22421637 -78958884 + AluJo SINE Alu 1 295 -17 2470 216 93 48 chr15 22421637 22422223 -78958298 - Charlie2 DNA MER1_type -225 2637 1987 1860 158 18 0 chr15 22422223 22422507 -78958014 - AluJo SINE Alu -23 289 1 2470 216 93 48 chr15 22422507 22422645 -78957876 - Charlie2 DNA MER1_type -875 1987 1857 21 36 0 0 chr15 22423016 22423044 -78957477 + AT_rich Low_complexity Low_complexity 1 28 0 763 173 0 23 chr15 22423423 22423556 -78956965 + FLAM_A SINE Alu 1 130 -3 1883 200 68 8 chr15 22424227 22424738 -78955783 + MER67A LTR ERV1 2 543 0 994 243 47 7 chr15 22425740 22426035 -78954486 - MLT1E1 LTR MaLR 0 654 312 613 212 23 0 chr15 22426067 22426199 -78954322 + FLAM_C SINE Alu 9 143 0 1170 190 190 0 chr15 22426200 22426495 -78954026 - MLT1E1 LTR MaLR -303 351 1 287 49 24 0 chr15 22427580 22427621 -78952900 + (TG)n Simple_repeat Simple_repeat 2 43 0 3888 141 59 1 chr15 22427626 22428288 -78952233 - Tigger3b DNA MER2_type 0 1231 532 1395 176 0 0 chr15 22428288 22428498 -78952023 + AluJb SINE Alu 1 210 -102 1588 143 0 4 chr15 22428603 22428840 -78951681 + AluJb SINE Alu 65 300 -12 800 136 8 0 chr15 22428842 22428960 -78951561 - Tigger3b DNA MER2_type -693 539 421 361 123 18 0 chr15 22428965 22429022 -78951499 + AluJ/FRAM SINE Alu 229 286 -16 22 0 0 0 chr15 22429023 22429045 -78951476 + AT_rich Low_complexity Low_complexity 1 22 0 1989 154 59 31 chr15 22429045 22429434 -78951087 - Tigger3b DNA MER2_type -830 401 2 392 141 0 35 chr15 22429445 22429530 -78950991 + (TA)n Simple_repeat Simple_repeat 1 82 0 194 302 32 0 chr15 22430338 22430401 -78950120 - MER5A DNA MER1_type -52 137 73 276 316 137 5 chr15 22430476 22430666 -78949855 + MIR SINE MIR 46 260 -2 658 208 8 8 chr15 22430914 22431044 -78949477 - AluJo SINE Alu -178 134 5 276 130 0 0 chr15 22431361 22431407 -78949114 + (T)n Simple_repeat Simple_repeat 1 46 0 270 218 0 18 chr15 22431407 22431462 -78949059 - MER31A LTR ERV1 -84 401 348 1949 230 6 10 chr15 22432833 22433318 -78947203 + L1MC4a LINE L1 3763 4317 -1829 665 172 0 0 chr15 22436275 22436391 -78944130 + FLAM_C SINE Alu 1 116 -17 22 0 0 0 chr15 22436391 22436413 -78944108 + AT_rich Low_complexity Low_complexity 1 22 0 933 255 150 39 chr15 22436611 22437098 -78943423 + L1MC4a LINE L1 5287 5827 -1981 3521 177 18 9 chr15 22437731 22438398 -78942123 + L1MC1 LINE L1 5660 6332 -1 2419 72 0 0 chr15 22438782 22439074 -78941447 + AluY SINE Alu 1 292 -19 1333 188 16 38 chr15 22439303 22439622 -78940899 + AluJo SINE Alu 1 312 0 299 328 58 43 chr15 22439885 22440211 -78940310 + L1MC/D LINE L1 5435 5765 -2043 1646 176 7 17 chr15 22440661 22440951 -78939570 + AluJo SINE Alu 1 287 -25 317 110 49 24 chr15 22440951 22441033 -78939488 + GA-rich Low_complexity Low_complexity 1 84 0 1587 219 28 14 chr15 22442114 22442205 -78938316 + MER47A DNA MER2_type 3 91 -2232 1357 161 142 11 chr15 22442205 22442472 -78938049 + AluJb SINE Alu 1 302 0 1587 219 28 14 chr15 22442472 22442783 -78937738 + MER47A DNA MER2_type 91 366 0 282 56 0 0 chr15 22442783 22442819 -78937702 + (TTA)n Simple_repeat Simple_repeat 3 38 0 507 283 26 71 chr15 22442874 22443100 -78937421 - L2 LINE L2 0 3313 3098 1681 162 10 24 chr15 22443145 22443435 -78937086 + AluJo SINE Alu 26 311 -1 324 263 107 39 chr15 22444236 22444417 -78936104 - L1ME3A LINE L1 0 6170 5976 2225 217 53 31 chr15 22444429 22444941 -78935580 - L1ME2 LINE L1 -75 6325 5795 3082 145 10 2 chr15 22444941 22445423 -78935098 - MER66B LTR ERV1 0 486 1 2225 217 53 31 chr15 22445423 22445545 -78934976 - L1ME2 LINE L1 -605 5795 5677 374 261 57 78 chr15 22445543 22445588 -78934933 - L1ME2 LINE L1 -2613 3769 3725 * 1706 183 0 37 chr15 22445588 22445911 -78934610 - AluJb SINE Alu -1 311 1 374 261 57 78 chr15 22445911 22446095 -78934426 - L1ME2 LINE L1 -2657 3725 3545 862 293 103 28 chr15 22446128 22446977 -78933544 - L1ME2 LINE L1 -4451 2112 1005 2368 109 0 0 chr15 22447169 22447472 -78933049 - AluSx SINE Alu -9 303 1 541 314 29 77 chr15 22447688 22448012 -78932509 - L1ME2 LINE L1 -5963 600 299 1589 183 24 10 chr15 22448012 22448302 -78932219 + AluJo SINE Alu 1 294 -18 541 314 29 77 chr15 22448302 22448394 -78932127 - L1ME2 LINE L1 -6264 299 204 1049 115 26 19 chr15 22448896 22449052 -78931469 + AluSg/x SINE Alu 154 310 0 198 0 0 0 chr15 22449090 22449112 -78931409 + (TTTTTG)n Simple_repeat Simple_repeat 3 24 0 4029 77 0 0 chr15 22449113 22449635 -78930886 - L1PA8 LINE L1 0 6172 5651 1796 132 13 56 chr15 22449786 22450089 -78930432 - AluJo SINE Alu -18 294 5 2516 69 0 0 chr15 22450557 22450860 -78929661 - AluY SINE Alu -8 303 1 2180 196 50 14 chr15 22452305 22452492 -78928029 + MLT1C LTR MaLR 4 183 -284 222 37 0 0 chr15 22452492 22452519 -78928002 + (CA)n Simple_repeat Simple_repeat 2 28 0 2180 196 50 14 chr15 22452519 22452771 -78927750 + MLT1C LTR MaLR 183 459 -8 623 196 0 0 chr15 22452851 22452963 -78927558 + AluJb SINE Alu 200 311 -1 61 37 0 0 chr15 22453127 22453209 -78927312 + AT_rich Low_complexity Low_complexity 1 82 0 2075 211 79 68 chr15 22453209 22453464 -78927057 - L1MD2 LINE L1 -148 6211 5960 2032 158 0 0 chr15 22453464 22453775 -78926746 + AluJb SINE Alu 1 311 -1 2075 211 79 68 chr15 22453775 22454141 -78926380 - L1MD2 LINE L1 -399 5960 5583 245 276 32 0 chr15 22454210 22454295 -78926226 - L1M4 LINE L1 -256 5922 5831 635 154 0 0 chr15 22454320 22454424 -78926097 + AluJb SINE Alu 201 304 -8 843 152 25 93 chr15 22454424 22454519 -78926002 + ERVL-B3 LTR ERVL 5378 5478 -176 746 167 0 23 chr15 22454519 22454651 -78925870 + AluJ SINE Alu 2 130 -172 843 152 25 93 chr15 22454651 22454718 -78925803 + ERVL-B3 LTR ERVL 5478 5548 -106 735 189 0 0 chr15 22454718 22454840 -78925681 + FLAM_C SINE Alu 1 122 -11 843 152 25 93 chr15 22454840 22454973 -78925548 + ERVL-B3 LTR ERVL 5548 5654 0 2552 157 7 176 chr15 22454973 22455080 -78925441 + MLT2B3 LTR ERVL 1 124 -430 1854 167 3 0 chr15 22455080 22455362 -78925159 - AluJo SINE Alu -25 287 5 2552 157 7 176 chr15 22455362 22455828 -78924693 + MLT2B3 LTR ERVL 124 516 -38 812 88 19 32 chr15 22455829 22456050 -78924471 + (TCTA)n Simple_repeat Simple_repeat 1 217 0 903 100 17 17 chr15 22456098 22456278 -78924243 + (TCTA)n Simple_repeat Simple_repeat 1 180 0 302 98 66 33 chr15 22456292 22456353 -78924168 + MLT2B1 LTR ERVL 458 520 0 1021 167 13 0 chr15 22456886 22457042 -78923479 + AluJ SINE Alu 133 290 -22 26 30 0 0 chr15 22457364 22457397 -78923124 + AT_rich Low_complexity Low_complexity 1 33 0 282 281 20 92 chr15 22457597 22457750 -78922771 - L2 LINE L2 -3 3310 3169 307 370 53 53 chr15 22458094 22458359 -78922162 - HAL1 LINE L1 -1405 1102 838 464 305 54 18 chr15 22458394 22458561 -78921960 - MER5B DNA MER1_type 0 178 6 2482 63 0 3 chr15 22458755 22459057 -78921464 - AluSg SINE Alu -3 307 7 25 0 0 0 chr15 22459337 22459362 -78921159 + AT_rich Low_complexity Low_complexity 1 25 0 2231 103 14 0 chr15 22459382 22459674 -78920847 - AluSp SINE Alu -17 296 1 498 135 0 58 chr15 22459862 22459960 -78920561 + FLAM_C SINE Alu 45 137 -1 2014 141 17 3 chr15 22459960 22460251 -78920270 - AluSx SINE Alu -17 295 1 32 0 0 0 chr15 22460256 22460288 -78920233 + AT_rich Low_complexity Low_complexity 1 32 0 210 345 84 8 chr15 22460717 22460836 -78919685 + L2 LINE L2 2467 2594 -720 686 273 167 9 chr15 22461192 22461628 -78918893 + L2 LINE L2 2452 2956 -358 303 320 144 7 chr15 22461910 22462063 -78918458 + L2 LINE L2 2895 3068 -245 285 311 48 10 chr15 22462103 22462206 -78918315 + L2 LINE L2 3201 3307 -6 22 0 0 0 chr15 22464355 22464377 -78916144 + GC_rich Low_complexity Low_complexity 1 22 0 242 169 42 28 chr15 22464422 22464493 -78916028 + (GGCTG)n Simple_repeat Simple_repeat 5 76 0 1903 177 10 3 chr15 22465800 22466110 -78914411 + AluJb SINE Alu 1 312 0 1617 193 18 12 chr15 22466901 22467228 -78913293 - L1MB3 LINE L1 -193 5990 5662 336 24 0 0 chr15 22467697 22467738 -78912783 + (CA)n Simple_repeat Simple_repeat 2 42 0 372 133 0 0 chr15 22470010 22470070 -78910451 + (TG)n Simple_repeat Simple_repeat 2 61 0 425 233 63 126 chr15 22470371 22470574 -78909947 + LTR41 LTR ERVL 461 644 -129 1383 197 21 45 chr15 22470574 22470863 -78909658 - AluJo SINE Alu -30 282 1 425 233 63 126 chr15 22470863 22470930 -78909591 + LTR41 LTR ERVL 644 714 -59 317 219 59 3 chr15 22470945 22471051 -78909470 + LTR50 LTR ERVL 665 794 -1 2370 131 54 28 chr15 22472962 22473153 -78907368 + Tigger2 DNA MER2_type 2280 2465 -253 2566 63 0 0 chr15 22473153 22473452 -78907069 - AluY SINE Alu -12 299 1 2370 131 54 28 chr15 22473452 22473688 -78906833 + Tigger2 DNA MER2_type 2465 2718 0 391 103 17 0 chr15 22474361 22474419 -78906102 + Alu SINE Alu 1 59 -241 350 231 90 30 chr15 22475162 22475296 -78905225 - MIR SINE MIR -74 188 47 309 252 206 13 chr15 22475335 22475490 -78905031 - MER5A DNA MER1_type -2 187 3 240 250 250 0 chr15 22475797 22475873 -78904648 - MIR SINE MIR -50 212 118 193 262 0 0 chr15 22476894 22476936 -78903585 + MER5A DNA MER1_type 40 81 -108 1496 173 0 12 chr15 22477763 22478011 -78902510 - AluJo SINE Alu -67 245 1 1533 219 54 74 chr15 22478011 22478388 -78902133 - L1MC5 LINE L1 -308 7653 7291 240 35 0 0 chr15 22478388 22478417 -78902104 + (TTG)n Simple_repeat Simple_repeat 2 30 0 1533 219 54 74 chr15 22478417 22478664 -78901857 - L1MC5 LINE L1 -670 7291 7041 1925 107 73 25 chr15 22478693 22479049 -78901472 - THE1C LTR MaLR -2 373 1 698 203 57 28 chr15 22479062 22479274 -78901247 - L1MD3 LINE L1 0 7995 7778 3066 231 22 66 chr15 22479295 22479594 -78900927 - L1M4 LINE L1 -1825 4321 4010 312 27 0 0 chr15 22479594 22479631 -78900890 + (TG)n Simple_repeat Simple_repeat 2 38 0 3066 231 22 66 chr15 22479631 22480085 -78900436 - L1M4 LINE L1 -2136 4010 3626 2383 96 3 6 chr15 22480085 22480397 -78900124 - AluSq SINE Alu -2 311 1 3066 231 22 66 chr15 22480397 22480704 -78899817 - L1M4 LINE L1 -2520 3626 3307 570 243 110 57 chr15 22480954 22481255 -78899266 + L1MD2 LINE L1 1 317 -6223 2829 235 52 17 chr15 22481442 22483302 -78897219 + L1MD2 LINE L1 4391 6553 -2 1470 254 62 16 chr15 22483298 22483746 -78896775 + L1MD2 LINE L1 5881 6349 -10 * 1299 199 88 6 chr15 22485912 22486243 -78894278 - L1MA9 LINE L1 -258 6054 5697 769 169 26 56 chr15 22486258 22486453 -78894068 + L1MA9 LINE L1 6042 6230 -82 442 252 37 7 chr15 22486574 22486709 -78893812 - L1MD3 LINE L1 -1066 6929 6791 318 147 73 147 chr15 22486740 22486849 -78893672 - L1MC5 LINE L1 -1000 6961 6861 550 152 0 0 chr15 22486849 22486941 -78893580 - AluJ/FRAM SINE Alu -3 309 218 198 0 0 0 chr15 22486961 22486983 -78893538 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1215 246 66 33 chr15 22487810 22488395 -78892126 - LTR48B LTR ERV1 0 644 1 570 163 10 0 chr15 22488909 22489007 -78891514 - FLAM_C SINE Alu -16 127 29 21 0 0 0 chr15 22489433 22489454 -78891067 + AT_rich Low_complexity Low_complexity 1 21 0 1984 224 52 20 chr15 22491412 22491953 -78888568 + MER74A LTR ERVL 1 558 0 2069 86 0 36 chr15 22492104 22492384 -78888137 + AluY SINE Alu 38 307 -4 998 233 97 3 chr15 22493497 22493785 -78886736 - MLT1B LTR MaLR 0 390 76 2474 82 3 0 chr15 22494055 22494359 -78886162 - AluSg SINE Alu -5 305 1 1849 148 13 20 chr15 22495810 22496113 -78884408 - AluJo SINE Alu -10 302 2 23 0 0 0 chr15 22496528 22496551 -78883970 + AT_rich Low_complexity Low_complexity 1 23 0 1313 270 53 18 chr15 22496551 22497056 -78883465 - L1MB4 LINE L1 -26 6154 5632 783 201 154 21 chr15 22497061 22497295 -78883226 - L1MB5 LINE L1 -36 6138 5874 2400 117 0 0 chr15 22497320 22497627 -78882894 - AluSg SINE Alu -3 307 1 266 267 19 29 chr15 22497653 22497758 -78882763 - L1MC5 LINE L1 -44 7917 7814 351 0 0 0 chr15 22499117 22499156 -78881365 + (TG)n Simple_repeat Simple_repeat 2 40 0 803 94 0 9 chr15 22499827 22499933 -78880588 + AluSq/x SINE Alu 3 107 -206 277 306 74 33 chr15 22500068 22500189 -78880332 - L2 LINE L2 -1 3312 3187 2334 92 3 7 chr15 22501568 22501871 -78878650 - AluSp SINE Alu -8 305 4 381 129 0 0 chr15 22502314 22502384 -78878137 + (TG)n Simple_repeat Simple_repeat 1 70 0 2243 174 47 5 chr15 22503997 22504115 -78876406 - LTR34 LTR ERV1 0 699 588 2335 91 3 10 chr15 22504115 22504413 -78876108 + AluSx SINE Alu 1 296 -16 2243 174 47 5 chr15 22504413 22504737 -78875784 - LTR34 LTR ERV1 -111 588 238 742 179 0 21 chr15 22504739 22504879 -78875642 - FLAM_C SINE Alu -6 137 1 405 157 0 0 chr15 22504885 22504955 -78875566 - LTR34 LTR ERV1 -463 236 167 2459 189 20 2 chr15 22504955 22505404 -78875117 - LTR32 LTR ERVL 0 471 15 577 228 82 0 chr15 22505404 22505562 -78874959 - LTR34 LTR ERV1 -528 171 1 262 323 82 25 chr15 22505656 22505814 -78874707 - MIR SINE MIR -69 193 27 1781 185 97 0 chr15 22506042 22506393 -78874128 - MLT1B LTR MaLR -5 385 1 2439 78 3 10 chr15 22506653 22506962 -78873559 - AluSg SINE Alu -3 307 1 1417 182 94 42 chr15 22507340 22507626 -78872895 + AluJb SINE Alu 3 303 -9 224 274 97 0 chr15 22508444 22508557 -78871964 - MER5B DNA MER1_type -1 177 54 363 323 41 19 chr15 22508575 22508762 -78871759 - MIR SINE MIR -59 149 3 24 0 0 0 chr15 22509244 22509268 -78871253 + AT_rich Low_complexity Low_complexity 1 24 0 291 234 170 50 chr15 22509768 22509871 -78870650 + MIR SINE MIR 25 151 -57 2542 99 29 0 chr15 22509871 22510216 -78870305 + THE1A LTR MaLR 1 355 0 291 234 170 50 chr15 22510216 22510253 -78870268 + MIR SINE MIR 151 182 -26 1681 183 22 36 chr15 22511447 22511803 -78868718 - MLT1A1 LTR MaLR 0 365 15 360 294 171 0 chr15 22511965 22512111 -78868410 + MER5A DNA MER1_type 19 189 0 331 169 99 0 chr15 22512590 22512661 -78867860 - MLT2B1 LTR ERVL -435 85 8 1088 119 0 40 chr15 22513016 22513192 -78867329 + AluSq SINE Alu 140 308 -5 2010 110 3 3 chr15 22513742 22514041 -78866480 - AluSp SINE Alu -14 299 1 3572 272 105 30 chr15 22518160 22519825 -78860696 + L1MEc LINE L1 15 1804 -4592 188 67 33 0 chr15 22521576 22521606 -78858915 + (TTTTG)n Simple_repeat Simple_repeat 1 31 0 744 153 0 0 chr15 22521610 22521721 -78858800 - FLAM_C SINE Alu -32 111 1 2248 110 0 0 chr15 22522432 22522740 -78857781 - AluSx SINE Alu -4 308 1 281 297 110 0 chr15 22523109 22523200 -78857321 + MIR SINE MIR 96 196 -66 533 94 106 12 chr15 22523340 22523425 -78857096 + HY4 scRNA scRNA 1 93 0 23 0 0 0 chr15 22523425 22523448 -78857073 + AT_rich Low_complexity Low_complexity 1 23 0 2016 175 54 26 chr15 22523773 22524236 -78856285 + L1 LINE L1 4456 4931 -1215 256 346 10 29 chr15 22524834 22524938 -78855583 + L2 LINE L2 3171 3272 0 1525 236 61 21 chr15 22525300 22525774 -78854747 + MLT1D LTR MaLR 6 498 -7 218 233 53 41 chr15 22526736 22526847 -78853674 - MIR SINE MIR -48 214 106 785 250 9 14 chr15 22527947 22528163 -78852358 - MER96B DNA MER1_type? -195 222 8 1040 142 21 16 chr15 22528468 22528658 -78851863 - AluJb SINE Alu -7 305 115 2353 144 64 0 chr15 22530936 22531360 -78849161 + L1MA7 LINE L1 5835 6285 -6 1439 143 135 12 chr15 22531810 22532069 -78848452 - AluJb SINE Alu -21 291 1 2372 117 90 12 chr15 22532093 22532494 -78848027 - MSTB1 LTR MaLR 0 432 1 22 0 0 0 chr15 22533861 22533883 -78846638 + AT_rich Low_complexity Low_complexity 1 22 0 240 352 29 9 chr15 22534056 22534161 -78846360 + MIR3 SINE MIR 93 199 -9 2352 81 0 0 chr15 22535055 22535352 -78845169 + AluSp SINE Alu 1 297 -16 1390 155 9 94 chr15 22536539 22536880 -78843641 + AluJo SINE Alu 1 312 0 1051 112 31 0 chr15 22536980 22537141 -78843380 + AluSg/x SINE Alu 133 298 -12 858 231 23 14 chr15 22538277 22538493 -78842028 + MER20 DNA MER1_type 1 218 -1 243 0 0 0 chr15 22538633 22538660 -78841861 + (CA)n Simple_repeat Simple_repeat 1 27 0 1711 146 3 14 chr15 22538965 22539259 -78841262 + AluJb SINE Alu 1 291 -21 346 315 74 31 chr15 22539881 22540043 -78840478 + MIR SINE MIR 73 241 -21 1527 177 7 17 chr15 22540475 22540609 -78839912 + AluJo SINE Alu 3 137 -175 2182 82 0 0 chr15 22540609 22540923 -78839598 + AluY SINE Alu 1 311 0 1527 177 7 17 chr15 22540923 22541088 -78839433 + AluJo SINE Alu 137 299 -13 3124 192 112 36 chr15 22541298 22541444 -78839077 - L1MB8 LINE L1 -10 6168 6034 1569 179 0 27 chr15 22541444 22541741 -78838780 - AluJo SINE Alu -23 289 1 3124 192 112 36 chr15 22541741 22542543 -78837978 - L1MB8 LINE L1 -144 6034 5154 446 116 74 0 chr15 22542547 22542642 -78837879 - L1MA8 LINE L1 -5 6286 6185 375 145 48 46 chr15 22542667 22542720 -78837801 + L1MA8 LINE L1 6073 6124 -167 2129 89 26 0 chr15 22542720 22543023 -78837498 - AluY SINE Alu 0 311 1 375 145 48 46 chr15 22543023 22543078 -78837443 + L1MA8 LINE L1 6124 6184 -107 279 59 0 0 chr15 22543124 22543158 -78837363 + L1MA8 LINE L1 6182 6215 -76 234 125 25 0 chr15 22543128 22543168 -78837353 + L1MA7 LINE L1 6186 6226 -65 * 2029 139 0 0 chr15 22543439 22543748 -78836773 + AluSx SINE Alu 1 309 -3 1469 169 23 0 chr15 22543763 22544024 -78836497 - L1MA5 LINE L1 -9 6291 6025 1654 240 52 9 chr15 22544382 22544820 -78835701 - MLT1C LTR MaLR 0 467 11 243 310 98 44 chr15 22546635 22547022 -78833499 + L2 LINE L2 2566 2973 -341 326 224 139 73 chr15 22547764 22548023 -78832498 + L1ME4a LINE L1 5589 5864 -257 5084 218 83 37 chr15 22548062 22549887 -78830634 - L1M4 LINE L1 -3139 3505 1766 1572 148 0 0 chr15 22549887 22550152 -78830369 - AluSx SINE Alu 0 322 58 1646 170 7 14 chr15 22550155 22550444 -78830077 - AluJb SINE Alu -25 287 1 5084 218 83 37 chr15 22550444 22551673 -78828848 - L1M4 LINE L1 -4879 1765 282 198 0 0 0 chr15 22551678 22551700 -78828821 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 678 220 68 0 chr15 22551710 22551842 -78828679 - FRAM SINE Alu -35 141 1 1072 209 8 32 chr15 22551853 22552106 -78828415 - L1M4 LINE L1 -6289 253 7 1597 179 16 7 chr15 22552218 22552526 -78827995 - AluJb SINE Alu -1 311 1 615 313 0 6 chr15 22552678 22552857 -78827664 + MER58A DNA MER1_type 46 223 -1 224 365 56 0 chr15 22553277 22553384 -78827137 + MIR SINE MIR 80 192 -70 192 306 120 19 chr15 22554076 22554184 -78826337 + MIR SINE MIR 33 151 -57 281 256 105 0 chr15 22554511 22554597 -78825924 - L1ME4a LINE L1 -222 5899 5805 1499 172 38 7 chr15 22554889 22555180 -78825341 - AluJo SINE Alu 0 312 13 392 276 163 63 chr15 22555198 22555517 -78825004 - L1ME4a LINE L1 -787 5359 5009 447 320 115 40 chr15 22555746 22556243 -78824278 - L1ME4a LINE L1 -1456 4690 4157 4983 157 39 4 chr15 22556255 22557352 -78823169 - L1PB4 LINE L1 -7 6149 5016 893 208 120 0 chr15 22759548 22759916 -78620605 + LTR54 LTR ERV1 1 450 -60 785 245 63 100 chr15 22759947 22760506 -78620015 - MLT1E LTR MaLR -4 589 1 1200 230 109 35 chr15 22760832 22761236 -78619285 - MER57B LTR ERV1 0 434 1 182 330 11 23 chr15 22761458 22761546 -78618975 - L2 LINE L2 -255 3017 2931 1040 162 47 11 chr15 22762900 22763091 -78617430 + MLT1A1 LTR MaLR 9 206 -159 2022 192 8 6 chr15 22763135 22763495 -78617026 - MLT1A1 LTR MaLR 0 365 5 1644 219 24 4 chr15 22763499 22763869 -78616652 - MLT1A1-int LTR MaLR 0 1651 1306 3027 179 22 72 chr15 22764241 22764444 -78616077 - MLT1A1-int LTR MaLR -1031 704 492 2354 90 40 0 chr15 22764444 22764745 -78615776 - AluSq SINE Alu 0 313 1 3027 179 22 72 chr15 22764745 22765282 -78615239 - MLT1A1-int LTR MaLR -1243 492 1 186 189 0 0 chr15 22765282 22765319 -78615202 + T-rich Low_complexity Low_complexity 1 37 0 2404 105 0 9 chr15 22765321 22765636 -78614885 - AluSx SINE Alu 0 312 1 1736 188 79 9 chr15 22765645 22765986 -78614535 - MLT1A1 LTR MaLR 0 365 1 199 353 12 12 chr15 22767156 22767241 -78613280 + L2 LINE L2 3188 3272 0 225 264 127 9 chr15 22767545 22767655 -78612866 - L2 LINE L2 -223 3049 2927 642 275 85 35 chr15 22767984 22768094 -78612427 + MLT1C LTR MaLR 3 106 -361 2372 92 0 10 chr15 22768094 22768397 -78612124 - AluSc SINE Alu -7 302 3 642 275 85 35 chr15 22768397 22768725 -78611796 + MLT1C LTR MaLR 106 464 -3 748 210 82 20 chr15 22769827 22770022 -78610499 + MLT2B2 LTR ERVL 1 207 -308 390 233 11 0 chr15 22770058 22770148 -78610373 + MLT2D LTR ERVL 316 406 -8 290 302 56 16 chr15 22770423 22770549 -78609972 + MIR SINE MIR 126 256 -6 1139 219 77 28 chr15 22770570 22770922 -78609599 + MLT1C LTR MaLR 6 374 -93 1326 211 111 4 chr15 22771944 22772060 -78608461 + AluJo SINE Alu 1 103 -209 213 39 0 0 chr15 22772060 22772086 -78608435 + (TAAA)n Simple_repeat Simple_repeat 3 28 0 1326 211 111 4 chr15 22772086 22772248 -78608273 + AluJo SINE Alu 103 309 -3 749 214 0 0 chr15 22772273 22772404 -78608117 + FLAM_A SINE Alu 1 131 -2 492 271 171 65 chr15 22772476 22772967 -78607554 + MLT1H LTR MaLR 7 549 0 43 47 0 0 chr15 22773180 22773244 -78607277 + AT_rich Low_complexity Low_complexity 1 64 0 2317 97 3 31 chr15 22773911 22774232 -78606289 - AluSp SINE Alu -1 312 1 495 219 0 0 chr15 22776970 22777075 -78603446 + MER45A DNA AcHobo 72 176 -2 35 24 0 0 chr15 22778531 22778573 -78601948 + AT_rich Low_complexity Low_complexity 1 42 0 1063 178 14 14 chr15 22779237 22779451 -78601070 + MLT1A1 LTR MaLR 1 214 -151 3718 103 19 17 chr15 22779451 22779977 -78600544 - MER1A DNA MER1_type 0 527 1 5074 153 37 9 chr15 22780581 22781808 -78598713 + L1PA16 LINE L1 4730 5999 -167 1989 106 81 0 chr15 22781808 22782091 -78598430 + AluSx SINE Alu 1 306 -6 5074 153 37 9 chr15 22782091 22782262 -78598259 + L1PA16 LINE L1 5999 6164 -2 238 353 0 17 chr15 22782806 22782925 -78597596 + MER58 DNA MER1_type 10 126 -2294 1692 185 34 25 chr15 22783248 22783604 -78596917 + MER46B DNA MER2_type 1 234 -2 526 154 0 39 chr15 22783724 22783828 -78596693 - L1MA6 LINE L1 0 6300 6201 1445 141 4 21 chr15 22783892 22784126 -78596395 + AluJb SINE Alu 1 230 -82 181 358 52 22 chr15 22784433 22784567 -78595954 + L3b LINE CR1 1102 1239 -344 2090 99 57 3 chr15 22785183 22785465 -78595056 - AluSc SINE Alu -12 297 1 247 340 81 36 chr15 22787131 22787440 -78593081 - L1MC/D LINE L1 -1976 5832 5510 367 335 51 10 chr15 22789210 22789407 -78591114 - L2 LINE L2 -10 3303 3099 473 175 28 34 chr15 22789422 22789967 -78590554 + (TG)n Simple_repeat Simple_repeat 1 542 0 243 79 0 0 chr15 22790085 22790123 -78590398 + (CGGGGG)n Simple_repeat Simple_repeat 3 40 0 1242 145 291 27 chr15 22790327 22790664 -78589857 - MSTA LTR MaLR 0 428 3 191 281 61 37 chr15 22791256 22791338 -78589183 - MER5B DNA MER1_type -82 96 13 1890 166 0 12 chr15 22791558 22791901 -78588620 - L1MB5 LINE L1 -194 6478 6140 1752 156 43 3 chr15 22791912 22792238 -78588283 + MER47A DNA MER2_type 28 366 0 1220 167 31 0 chr15 22792242 22792470 -78588051 - L1MB5 LINE L1 -540 6138 5904 * 3256 226 64 29 chr15 22792464 22793522 -78586999 - L1MB5 LINE L1 -1621 5023 3929 436 320 101 4 chr15 22793647 22793875 -78586646 - L1MB5 LINE L1 -6291 251 2 191 259 12 86 chr15 22794554 22794635 -78585886 - MIR3 SINE MIR -8 200 126 1765 73 20 4 chr15 22794743 22794988 -78585533 + L1PA10 LINE L1 5918 6166 -2 1740 149 11 0 chr15 22795883 22796152 -78584369 + AluSx SINE Alu 41 312 0 390 362 54 0 chr15 22796427 22796612 -78583909 - MIR SINE MIR -1 261 67 2089 98 79 25 chr15 22797797 22798153 -78582368 + THE1C LTR MaLR 1 375 0 759 233 132 35 chr15 22798226 22798517 -78582004 - MLT1E2 LTR MaLR -258 396 51 469 278 115 53 chr15 22798589 22798798 -78581723 - MIR SINE MIR -35 227 6 1304 167 40 4 chr15 22802250 22802478 -78578043 - MER46A DNA MER2_type 0 236 1 1896 216 98 5 chr15 22803449 22803876 -78576645 - MLT1C LTR MaLR 0 467 1 371 252 86 29 chr15 22804482 22804621 -78575900 - L2 LINE L2 -2 3311 3165 1972 129 0 4 chr15 22804699 22804978 -78575543 + AluSx SINE Alu 27 304 -8 227 318 45 23 chr15 22807245 22807377 -78573144 - LTR16B LTR ERVL -6 458 324 3248 233 38 55 chr15 22807666 22809676 -78570845 + L1MD2 LINE L1 4147 6133 -226 254 231 201 22 chr15 22809682 22809816 -78570705 + L1MD2 LINE L1 6191 6348 -11 21 0 0 0 chr15 22811345 22811366 -78569155 + AT_rich Low_complexity Low_complexity 1 21 0 2003 115 0 11 chr15 22811839 22812175 -78568346 + AluSx SINE Alu 1 333 0 228 226 0 19 chr15 22812472 22812525 -78567996 + C-rich Low_complexity Low_complexity 1 52 0 22 35 7 0 chr15 22815632 22815708 -78564813 + GC_rich Low_complexity Low_complexity 1 36 0 22 103 0 0 chr15 22815746 22815824 -78564697 + GC_rich Low_complexity Low_complexity 1 78 0 943 155 0 12 chr15 22816685 22816853 -78563668 + AluJb SINE Alu 1 166 -146 1920 121 0 0 chr15 22817291 22817564 -78562957 - AluSx SINE Alu -36 276 4 719 252 133 13 chr15 22817641 22817875 -78562646 - MIR SINE MIR 0 262 1 2785 10 0 0 chr15 22818406 22818717 -78561804 + AluYb8 SINE Alu 1 311 -7 289 276 0 23 chr15 22819382 22819469 -78561052 - L1ME3 LINE L1 -7 6155 6071 1877 177 88 20 chr15 22820954 22821048 -78559473 - L1MC2 LINE L1 0 6344 6258 361 36 36 0 chr15 22821048 22821103 -78559418 + (CA)n Simple_repeat Simple_repeat 2 58 0 1877 177 88 20 chr15 22821103 22821449 -78559072 - L1MC2 LINE L1 -86 6258 5874 315 291 103 14 chr15 22821900 22822266 -78558255 - L1ME LINE L1 -4869 1671 1262 2635 124 41 5 chr15 22822372 22822783 -78557738 - MSTB LTR MaLR 0 426 1 22 0 0 0 chr15 22823713 22823735 -78556786 + AT_rich Low_complexity Low_complexity 1 22 0 408 289 162 7 chr15 22823936 22824078 -78556443 + MER5A DNA MER1_type 18 181 -8 507 335 31 11 chr15 22825998 22826189 -78554332 - L2 LINE L2 0 3313 3119 2013 113 3 0 chr15 22826410 22826694 -78553827 + AluSg SINE Alu 1 285 -25 2232 175 31 26 chr15 22826820 22827277 -78553244 + MLT1C LTR MaLR 9 467 0 3969 112 28 0 chr15 22827322 22827886 -78552635 - LTR19B LTR ERV1 0 580 1 629 207 39 96 chr15 22828110 22828318 -78552203 - MLT1A1 LTR MaLR -2 363 168 797 199 145 11 chr15 22828944 22829310 -78551211 - MER31B LTR ERV1 0 543 1 1764 157 7 0 chr15 22831194 22831481 -78549040 - AluJb SINE Alu -23 289 1 282 289 11 22 chr15 22833102 22833192 -78547329 - MLT1J1 LTR MaLR -141 305 217 330 286 62 34 chr15 22833206 22833384 -78547137 - MLT1J LTR MaLR -327 184 2 458 327 44 10 chr15 22835883 22836088 -78544433 - L3 LINE CR1 -151 1426 1215 1652 134 0 96 chr15 22836289 22836632 -78543889 + AluY SINE Alu 1 310 -1 197 357 31 10 chr15 22836860 22836958 -78543563 + MIR3 SINE MIR 102 201 -7 1997 136 110 18 chr15 22837310 22837700 -78542821 + MSTB LTR MaLR 1 426 0 218 176 20 0 chr15 22839182 22839233 -78541288 + (TGAA)n Simple_repeat Simple_repeat 3 54 0 309 266 187 12 chr15 22841395 22841636 -78538885 + LTR16A1 LTR ERVL 75 357 -100 439 248 16 16 chr15 22841730 22841855 -78538666 + LTR67 LTR ERVL 426 550 -7 1204 203 127 152 chr15 22841877 22842655 -78537866 - LTR41 LTR ERVL -10 763 5 389 279 36 89 chr15 22843491 22843738 -78536783 + L1ME4a LINE L1 5885 6118 -3 252 212 30 15 chr15 22846329 22846395 -78534126 + CT-rich Low_complexity Low_complexity 4 70 0 386 312 95 18 chr15 22846512 22846797 -78533724 - MLT1J1 LTR MaLR -8 438 132 198 0 0 0 chr15 22846988 22847010 -78533511 + (CAAA)n Simple_repeat Simple_repeat 3 24 0 782 286 84 35 chr15 22847642 22847897 -78532624 - MLT1E LTR MaLR 0 593 321 1949 110 52 55 chr15 22847897 22848262 -78532259 - THE1B LTR MaLR 0 364 1 782 286 84 35 chr15 22848262 22848293 -78532228 - MLT1E LTR MaLR -272 321 293 250 304 13 0 chr15 22848371 22848450 -78532071 - MLT1E LTR MaLR -436 157 78 2041 122 0 3 chr15 22848568 22848871 -78531650 - AluSg SINE Alu -8 302 1 2223 89 7 0 chr15 22852349 22852651 -78527870 - AluSx SINE Alu -8 304 1 4796 172 35 22 chr15 22852787 22854098 -78526423 + L1MB3 LINE L1 4849 6175 -8 1629 201 0 7 chr15 22855533 22855837 -78524684 - AluJo SINE Alu -10 302 1 940 218 13 0 chr15 22856201 22856426 -78524095 - L1MA4 LINE L1 -3 6297 6070 2287 63 0 16 chr15 22856679 22856994 -78523527 + AluY SINE Alu 1 310 -1 327 305 35 0 chr15 22857188 22857318 -78523203 + MIR SINE MIR 25 166 -96 253 264 239 39 chr15 22857821 22857976 -78522545 - MIR SINE MIR -26 236 51 2570 51 0 6 chr15 22858025 22858337 -78522184 + AluY SINE Alu 1 310 -1 286 290 0 0 chr15 22859186 22859255 -78521266 + MIR SINE MIR 76 144 -64 644 300 59 39 chr15 22859520 22859857 -78520664 + L1MB1 LINE L1 242 585 -5546 239 125 429 0 chr15 22860072 22860128 -78520393 + MADE1 DNA Mariner 1 80 0 376 257 30 10 chr15 22860150 22860252 -78520269 + L1M3d LINE L1 898 999 -5132 * 3923 230 66 64 chr15 22860242 22861087 -78519434 + L1MB1 LINE L1 662 1504 -4706 449 161 0 0 chr15 22861087 22861168 -78519353 + AluJ/FRAM SINE Alu 232 312 0 3923 230 66 64 chr15 22861168 22861707 -78518814 + L1MB1 LINE L1 1504 2040 -4170 2619 36 0 10 chr15 22861707 22862010 -78518511 + AluY SINE Alu 1 300 -11 3923 230 66 64 chr15 22862010 22863307 -78517214 + L1MB1 LINE L1 2040 3435 -2775 2697 236 30 10 chr15 22863311 22864043 -78516478 + L1MB1 LINE L1 4493 5239 -971 1151 184 22 4 chr15 22864040 22864268 -78516253 + L1MB1 LINE L1 5778 6009 -223 * 505 287 35 54 chr15 22864506 22864767 -78515754 - L2 LINE L2 -4 3309 3054 689 346 26 8 chr15 22864896 22865402 -78515119 + L1MEc LINE L1 1284 1798 -4598 2481 61 0 3 chr15 22865530 22865827 -78514694 - AluY SINE Alu -15 296 1 452 291 30 39 chr15 22866346 22866580 -78513941 - L1ME2 LINE L1 -10 6154 5923 * 871 234 68 0 chr15 22866577 22866825 -78513696 + L1ME2 LINE L1 5647 5911 -253 3391 98 34 23 chr15 22867006 22867535 -78512986 - L1PA14 LINE L1 -1 6160 5626 1381 176 0 5 chr15 22869381 22869602 -78510919 - AluJb SINE Alu -21 291 72 1656 107 5 32 chr15 22870892 22871419 -78509102 + MER4B LTR ERV1 1 610 0 279 324 6 59 chr15 22871427 22871581 -78508940 - MIR SINE MIR -62 146 24 276 30 0 0 chr15 22871852 22871885 -78508636 + (GA)n Simple_repeat Simple_repeat 1 33 0 22 0 0 0 chr15 22872116 22872138 -78508383 + AT_rich Low_complexity Low_complexity 1 22 0 199 377 0 0 chr15 22872666 22872743 -78507778 + L2 LINE L2 3196 3272 0 256 300 12 12 chr15 22872891 22872971 -78507550 + Charlie8 DNA MER1_type 154 233 -2184 1889 284 86 57 chr15 22873012 22874151 -78506370 + L1MC4a LINE L1 -244 927 -5353 1802 254 36 39 chr15 22874189 22875024 -78505497 + L1MC4a LINE L1 1314 2307 -4256 2490 207 33 37 chr15 22875031 22875686 -78504835 + L1MC4a LINE L1 2329 2981 -3401 1522 164 114 18 chr15 22875686 22875966 -78504555 - AluJb SINE Alu -5 307 1 2490 207 33 37 chr15 22875966 22876037 -78504484 + L1MC4a LINE L1 2981 3051 -3331 376 304 62 0 chr15 22876038 22876150 -78504371 + MER94 DNA DNA 15 133 -1 704 110 0 42 chr15 22876377 22876495 -78504026 - L1MA3 LINE L1 -19 6286 6174 793 165 15 0 chr15 22876622 22876755 -78503766 - AluJo SINE Alu -171 141 7 5265 182 37 7 chr15 22876965 22877651 -78502870 - L1 LINE L1 -1049 5097 4365 207 0 0 0 chr15 22877651 22877674 -78502847 + (TTTTA)n Simple_repeat Simple_repeat 5 27 0 5265 182 37 7 chr15 22877674 22878060 -78502461 - L1 LINE L1 -1781 4365 3992 5383 160 14 23 chr15 22878067 22878276 -78502245 + L1MA7 LINE L1 5042 5251 -1040 2072 122 26 13 chr15 22878276 22878580 -78501941 - AluSx SINE Alu 0 312 5 5383 160 14 23 chr15 22878580 22879617 -78500904 + L1MA7 LINE L1 5251 6281 -10 229 239 150 17 chr15 22879664 22879898 -78500623 + L1MC4a LINE L1 3199 3463 -2919 450 53 0 0 chr15 22880145 22880202 -78500319 + (CA)n Simple_repeat Simple_repeat 2 58 0 240 35 0 0 chr15 22880201 22880230 -78500291 + (GA)n Simple_repeat Simple_repeat 2 30 0 * 241 264 41 50 chr15 22880235 22880356 -78500165 + L1MC4a LINE L1 3759 3878 -2504 413 329 82 30 chr15 22880569 22881675 -78498846 + L1MC4a LINE L1 4306 5469 -913 3443 243 83 110 chr15 22881705 22881804 -78498717 + L1MC4a LINE L1 5518 5618 -2426 2340 113 0 0 chr15 22881804 22882114 -78498407 - AluSg SINE Alu 0 310 1 3443 243 83 110 chr15 22882114 22884460 -78496061 + L1MC4a LINE L1 5618 7897 -147 1549 294 86 11 chr15 22886264 22886420 -78494101 + L1ME3 LINE L1 5272 5415 -747 2287 79 3 13 chr15 22886420 22886724 -78493797 + AluSc SINE Alu 1 301 -8 1549 294 86 11 chr15 22886724 22887230 -78493291 + L1ME3 LINE L1 5415 5984 -178 1860 97 0 73 chr15 22887351 22887665 -78492856 + AluSx SINE Alu 20 312 0 1158 183 10 0 chr15 22888356 22888558 -78491963 + AluJb SINE Alu 103 306 -6 368 183 11 0 chr15 22888565 22888658 -78491863 + GA-rich Low_complexity Low_complexity 3 96 0 22 56 0 0 chr15 22890342 22890378 -78490143 + AT_rich Low_complexity Low_complexity 1 36 0 3324 110 24 24 chr15 22890509 22891121 -78489400 + L1PA15 LINE L1 5069 5681 -484 1799 174 10 3 chr15 22891121 22891420 -78489101 + AluJb SINE Alu 1 301 -11 3324 110 24 24 chr15 22891420 22891497 -78489024 + L1PA15 LINE L1 5681 5756 -409 940 166 7 0 chr15 22891504 22891655 -78488866 + FRAM SINE Alu 9 160 -16 2134 122 18 9 chr15 22891655 22891991 -78488530 + L1PA15 LINE L1 5814 6152 -13 2107 123 3 0 chr15 22891998 22892300 -78488221 + AluSx SINE Alu 1 303 -9 352 298 191 6 chr15 22892675 22892843 -78487678 + MLT1H LTR MaLR 83 281 -268 283 170 0 0 chr15 22892869 22892916 -78487605 + L1M1 LINE L1 5816 5862 -438 1313 92 0 0 chr15 22893132 22893305 -78487216 + AluSc SINE Alu 134 306 -3 249 33 0 0 chr15 22893427 22893457 -78487064 + (TAAAA)n Simple_repeat Simple_repeat 2 31 0 235 300 190 0 chr15 22893600 22893700 -78486821 + MLT1H LTR MaLR 431 549 0 6116 76 47 37 chr15 22893830 22895339 -78485182 + SVA Other Other 327 1449 0 1000 182 0 18 chr15 22895480 22895677 -78484844 - AluJo SINE Alu 0 312 135 338 141 0 16 chr15 22895677 22895741 -78484780 + (TTTC)n Simple_repeat Simple_repeat 2 64 0 770 176 8 0 chr15 22895741 22895872 -78484649 - AluJo SINE Alu -169 133 2 261 0 0 0 chr15 22896597 22896626 -78483895 + (A)n Simple_repeat Simple_repeat 1 29 0 810 281 9 5 chr15 22897229 22897446 -78483075 + L1MEc LINE L1 32 249 -6147 2258 264 36 70 chr15 22897469 22897631 -78482890 + L1MEc LINE L1 415 581 -5815 2541 127 7 56 chr15 22897631 22898081 -78482440 - MSTA LTR MaLR 0 428 1 2258 264 36 70 chr15 22898081 22899117 -78481404 + L1MEc LINE L1 581 1572 -4824 1142 215 66 51 chr15 22899117 22899452 -78481069 + MER2 DNA MER2_type 5 344 0 2258 264 36 70 chr15 22899452 22899489 -78481032 + L1MEc LINE L1 1572 1609 -4787 2008 324 82 30 chr15 22899513 22900391 -78480130 + L1M4b LINE L1 -562 361 -5923 577 256 65 38 chr15 22900963 22901563 -78478958 + L1M4b LINE L1 655 1238 -5325 2282 68 0 10 chr15 22901563 22901855 -78478666 + AluY SINE Alu 1 289 -22 270 0 0 0 chr15 22901863 22901893 -78478628 + (TAAA)n Simple_repeat Simple_repeat 2 31 0 577 256 65 38 chr15 22901893 22902351 -78478170 + L1M4b LINE L1 1244 1989 -4574 25 31 0 0 chr15 22902439 22902471 -78478050 + AT_rich Low_complexity Low_complexity 1 32 0 2362 254 29 16 chr15 22902943 22903791 -78476730 + L1M4b LINE L1 2299 3112 -3270 13488 162 24 19 chr15 22903796 22906497 -78474024 + L1MA2 LINE L1 3022 5706 -2017 2387 87 3 0 chr15 22906497 22906806 -78473715 + AluY SINE Alu 1 310 -1 13488 162 24 19 chr15 22906806 22907437 -78473084 + L1MA2 LINE L1 5706 6332 -1391 2059 124 0 0 chr15 22907437 22907711 -78472810 + AluSg SINE Alu 25 298 -12 13488 162 24 19 chr15 22907711 22909024 -78471497 + L1MA2 LINE L1 6332 7721 -2 1571 218 66 61 chr15 22909055 22909614 -78470907 + L1MB7 LINE L1 5613 6174 -10 2696 234 76 26 chr15 22909650 22910855 -78469666 + L1MEc LINE L1 1997 3242 -2973 249 276 0 0 chr15 22910938 22910996 -78469525 + MIR3 SINE MIR 149 206 -2 1696 71 0 5 chr15 22911296 22911506 -78469015 - AluY SINE Alu -69 242 34 1631 152 4 12 chr15 22914731 22914987 -78465534 - AluJo SINE Alu -19 293 40 317 324 9 19 chr15 22916457 22916565 -78463956 - MIR3 SINE MIR -18 190 84 564 262 38 0 chr15 22916974 22917157 -78463364 + L1M4 LINE L1 2687 2876 -3270 307 190 0 0 chr15 22917165 22917223 -78463298 + L1ME LINE L1 5685 5742 -422 1326 99 0 20 chr15 22917343 22917544 -78462977 - L1PA13 LINE L1 -4 6159 5963 2446 198 118 39 chr15 22917544 22917728 -78462793 + L1M4 LINE L1 2867 3035 -3111 2359 74 0 16 chr15 22917728 22918040 -78462481 - AluY SINE Alu -4 307 1 2446 198 118 39 chr15 22918040 22918831 -78461690 + L1M4 LINE L1 3035 3919 -2227 22 35 0 0 chr15 22969893 22969922 -78410599 + AT_rich Low_complexity Low_complexity 1 29 0 1504 223 76 3 chr15 22970079 22970446 -78410075 + MER89 LTR ERV1 166 559 0 890 173 162 5 chr15 22970772 22970957 -78409564 + AluJo SINE Alu 81 294 -18 33 25 0 0 chr15 22971644 22971684 -78408837 + AT_rich Low_complexity Low_complexity 1 40 0 1983 157 141 11 chr15 22971735 22972044 -78408477 + MSTB LTR MaLR 3 371 -55 2049 103 65 3 chr15 22972044 22972335 -78408186 - AluSg SINE Alu -1 309 1 1983 157 141 11 chr15 22972335 22972400 -78408121 + MSTB LTR MaLR 371 426 0 36 65 0 49 chr15 22973017 22973140 -78407381 + AT_rich Low_complexity Low_complexity 1 117 0 795 153 13 38 chr15 22973140 22973297 -78407224 - FRAM SINE Alu -26 150 1 2378 165 85 6 chr15 22973594 22974395 -78406126 - L1M2 LINE L1 -536 5755 4895 1340 172 93 26 chr15 22974447 22974715 -78405806 - AluJo SINE Alu -25 287 2 3603 153 38 11 chr15 22975370 22976003 -78404518 - L1MA5 LINE L1 0 6300 5651 2253 174 62 24 chr15 22976243 22976709 -78403812 + MER72 LTR ERV1 239 722 0 1066 151 25 10 chr15 22978628 22978827 -78401694 - MER65A LTR ERV1 0 445 244 22 0 0 0 chr15 22978934 22978956 -78401565 + GC_rich Low_complexity Low_complexity 1 22 0 23 0 0 0 chr15 22979146 22979169 -78401352 + AT_rich Low_complexity Low_complexity 1 23 0 406 285 65 27 chr15 22979362 22979548 -78400973 + L1ME2 LINE L1 5707 5899 -265 349 262 44 44 chr15 22979594 22979833 -78400688 - L1ME LINE L1 -5007 1076 834 1179 129 0 0 chr15 22979839 22980009 -78400512 - AluSp SINE Alu -7 306 137 557 285 52 22 chr15 22980019 22980133 -78400388 - L1ME LINE L1 -5194 876 767 2062 119 22 19 chr15 22980133 22980445 -78400076 - AluSq SINE Alu 0 313 1 557 285 52 22 chr15 22980445 22980700 -78399821 - L1ME LINE L1 -5303 767 508 2133 142 0 0 chr15 22981513 22981816 -78398705 - AluSq SINE Alu 0 313 11 1378 66 12 0 chr15 22981971 22982137 -78398384 + L1PA7 LINE L1 5985 6152 -2 21 0 0 0 chr15 22982148 22982169 -78398352 + AT_rich Low_complexity Low_complexity 1 21 0 2469 122 98 0 chr15 22982172 22982550 -78397971 + MER4C LTR ERV1 51 465 0 718 283 101 24 chr15 22982550 22983097 -78397424 - L1MCa LINE L1 -3985 2622 2034 6944 140 46 9 chr15 22983109 22984291 -78396230 - Tigger3b DNA MER2_type -1 1230 6 384 284 36 47 chr15 22984456 22984701 -78395820 - L1MCa LINE L1 -4452 2155 1800 * 937 263 25 25 chr15 22984700 22984981 -78395540 + L1M4b LINE L1 400 680 -6179 24 0 0 0 chr15 22985599 22985623 -78394898 + AT_rich Low_complexity Low_complexity 1 24 0 596 248 25 12 chr15 22986089 22986250 -78394271 - MER5A DNA MER1_type -26 163 1 720 143 9 0 chr15 22986311 22986416 -78394105 + AluJb SINE Alu 2 107 -205 2144 165 98 73 chr15 22986783 22987347 -78393174 + MER34C LTR ERV1 1 578 -7 440 277 69 27 chr15 22988394 22988586 -78391935 - MIR SINE MIR -24 238 40 1282 177 53 87 chr15 22989211 22989589 -78390932 + MLT1A1 LTR MaLR 1 365 0 324 0 0 0 chr15 22991868 22991904 -78388617 + (CA)n Simple_repeat Simple_repeat 1 36 0 4797 140 24 40 chr15 22992702 22993135 -78387386 + L1PA14 LINE L1 4343 4781 -1380 2190 104 0 3 chr15 22993135 22993432 -78387089 + AluSx SINE Alu 1 296 -16 4797 140 24 40 chr15 22993432 22994413 -78386108 + L1PA14 LINE L1 4781 5728 -433 3109 97 27 0 chr15 22994513 22994924 -78385597 + L1PA14 LINE L1 5735 6156 -5 1023 173 24 0 chr15 22995296 22995464 -78385057 - FRAM SINE Alu -10 166 1 1609 168 0 42 chr15 22995486 22995795 -78384726 - AluJb SINE Alu -16 296 1 240 111 0 0 chr15 22997155 22997191 -78383330 + (A)n Simple_repeat Simple_repeat 1 36 0 434 288 109 71 chr15 22997253 22997621 -78382900 + L2 LINE L2 2928 3309 -4 2005 112 54 20 chr15 22997696 22997992 -78382529 - AluSx SINE Alu -6 306 1 1721 70 19 0 chr15 22998960 22999173 -78381348 - L1PA7 LINE L1 -3 6151 5935 1953 39 0 4 chr15 22999173 22999402 -78381119 + L1PA7 LINE L1 5718 5945 -209 5692 170 110 78 chr15 23000416 23000992 -78379529 - L1MC3 LINE L1 -7 7778 7222 238 215 0 118 chr15 23000992 23001085 -78379436 - MLT1D LTR MaLR -443 124 43 5692 170 110 78 chr15 23001085 23001959 -78378562 - L1MC3 LINE L1 -563 7222 6187 781 274 109 38 chr15 23002019 23002602 -78377919 + L1MDa LINE L1 1423 2025 -4515 1029 114 60 0 chr15 23002670 23002819 -78377702 - AluSq SINE Alu -12 301 144 2952 117 3 0 chr15 23002819 23003211 -78377310 + MER1A DNA MER1_type 133 525 -4 396 200 0 0 chr15 23003226 23003296 -78377225 - MLT1D LTR MaLR -435 70 1 2465 77 3 0 chr15 23003365 23003664 -78376857 + AluY SINE Alu 1 300 -11 367 282 31 11 chr15 23003854 23004007 -78376514 - L1ME LINE L1 -567 5595 5434 533 289 58 0 chr15 23004208 23004416 -78376105 + L1MDa LINE L1 2858 3077 -3463 249 257 95 0 chr15 23005403 23005477 -78375044 - L2 LINE L2 -4 3268 3188 253 185 154 0 chr15 23007497 23007562 -78372959 - MIR3 SINE MIR -48 160 86 849 158 129 0 chr15 23008565 23008736 -78371785 + LOR1a LTR ERV1 1 193 -304 515 136 45 0 chr15 23008737 23008825 -78371696 + LOR1b LTR ERV1 370 461 0 190 328 156 26 chr15 23009366 23009558 -78370963 - L3 LINE CR1 -41 1536 1320 212 322 299 0 chr15 23009694 23009868 -78370653 - MIR SINE MIR 0 262 37 1758 180 59 73 chr15 23011220 23011703 -78368818 + LTR39 LTR ERV1 1 395 -388 230 158 0 0 chr15 23011673 23011711 -78368810 + MER4D LTR ERV1 244 281 -591 * 2105 175 29 11 chr15 23011749 23012126 -78368395 + LTR39 LTR ERV1 400 783 0 517 235 74 20 chr15 23013582 23013731 -78366790 + MER34 LTR ERV1 1 157 -385 941 189 112 58 chr15 23013797 23014056 -78366465 + AluJb SINE Alu 1 273 -39 671 62 0 14 chr15 23014790 23014890 -78365631 - L1P5 LINE L1 -387 5764 5672 3630 12 5 0 chr15 23014898 23015309 -78365212 + L1HS LINE L1 5741 6153 -2 268 43 21 21 chr15 23015314 23015361 -78365160 + (TAAA)n Simple_repeat Simple_repeat 2 48 0 266 358 98 17 chr15 23017914 23018087 -78362434 - MIR SINE MIR -74 188 2 1273 157 50 5 chr15 23018417 23018822 -78361699 + LTR54 LTR ERV1 8 510 0 2063 159 31 48 chr15 23019111 23019532 -78360989 + L1MB3 LINE L1 5761 6174 -9 222 296 0 0 chr15 23021577 23021631 -78358890 + (TG)n Simple_repeat Simple_repeat 1 54 0 1775 171 39 47 chr15 23021989 23022370 -78358151 + MLT1B LTR MaLR 2 379 -11 480 155 0 0 chr15 23022630 23022769 -78357752 + AluS SINE Alu 227 365 0 231 314 35 0 chr15 23023082 23023168 -78357353 + MIR SINE MIR 51 139 -123 331 260 40 20 chr15 23023312 23023412 -78357109 - L2 LINE L2 0 3313 3212 14220 193 17 15 chr15 23024945 23029057 -78351464 + L1PA15 LINE L1 2047 6164 -1 678 299 104 8 chr15 23029367 23029732 -78350789 + L1ME LINE L1 5329 5728 -393 318 209 32 0 chr15 23030564 23030722 -78349799 + CT-rich Low_complexity Low_complexity 1 163 0 204 40 0 0 chr15 23030722 23030747 -78349774 + (CA)n Simple_repeat Simple_repeat 1 25 0 452 286 65 16 chr15 23031299 23031484 -78349037 + MER58A DNA MER1_type 26 219 -5 440 261 0 6 chr15 23032022 23032202 -78348319 + GA-rich Low_complexity Low_complexity 1 179 0 2117 166 119 5 chr15 23032268 23032647 -78347874 - MSTB LTR MaLR -4 422 1 7456 63 11 0 chr15 23032928 23034027 -78346494 - L1PA7 LINE L1 -3 6151 5049 2703 109 12 0 chr15 23034027 23034430 -78346091 + L1P LINE L1 3199 3606 -2540 489 214 10 0 chr15 23034835 23034933 -78345588 - Tigger5 DNA MER2_type 0 2323 2225 228 202 112 56 chr15 23035070 23035159 -78345362 + MIR SINE MIR 61 154 -108 240 266 159 18 chr15 23035182 23035295 -78345226 - MIR SINE MIR -9 253 125 273 226 107 0 chr15 23036051 23036135 -78344386 + L1MDb LINE L1 1013 1105 -5438 2161 138 0 0 chr15 23036149 23036461 -78344060 + AluSx SINE Alu 1 312 0 1991 100 38 0 chr15 23036464 23036725 -78343796 + AluSc SINE Alu 1 271 -38 264 149 0 0 chr15 23036733 23036780 -78343741 + (GA)n Simple_repeat Simple_repeat 2 48 0 3597 229 106 40 chr15 23036784 23038186 -78342335 + L1MDb LINE L1 1067 2560 -3980 44951 36 3 2 chr15 23038198 23044344 -78336177 + L1PA3 LINE L1 1 6154 -1 4802 176 90 10 chr15 23044362 23046049 -78334472 + L1PA16 LINE L1 4352 6166 0 3612 268 36 26 chr15 23046055 23047480 -78333041 + L1MDb LINE L1 2555 3993 -2547 230 263 18 0 chr15 23047517 23047574 -78332947 + L2 LINE L2 3180 3237 -76 2395 175 25 47 chr15 23047582 23048095 -78332426 + MER34B LTR ERV1 1 502 -63 189 147 0 0 chr15 23048133 23048167 -78332354 + MIR SINE MIR 218 251 -11 285 311 59 8 chr15 23048583 23048702 -78331819 + MIR SINE MIR 4 128 -134 258 384 64 5 chr15 23049394 23049613 -78330908 - MIR SINE MIR -20 242 11 257 127 38 51 chr15 23050044 23050123 -78330398 + (TTATA)n Simple_repeat Simple_repeat 3 80 0 186 171 0 0 chr15 23051392 23051433 -78329088 + (CA)n Simple_repeat Simple_repeat 1 41 0 4066 133 33 9 chr15 23052952 23053590 -78326931 + MER39B LTR ERV1 1 653 0 1739 176 124 21 chr15 23053884 23054321 -78326200 + MER31A LTR ERV1 1 542 -1 2078 173 71 149 chr15 23054366 23055152 -78325369 + LTR8A LTR ERV1 1 725 -2 207 178 22 22 chr15 23055417 23055462 -78325059 + L2 LINE L2 3026 3070 -202 300 250 48 48 chr15 23055860 23055964 -78324557 - MER103 DNA DNA -21 145 42 207 100 0 0 chr15 23056007 23056037 -78324484 + (T)n Simple_repeat Simple_repeat 1 30 0 519 238 81 104 chr15 23057059 23057441 -78323080 + L1MC5 LINE L1 6695 6965 -996 386 19 0 19 chr15 23057441 23057493 -78323028 + (GA)n Simple_repeat Simple_repeat 1 51 0 519 238 81 104 chr15 23057493 23057678 -78322843 + L1MC5 LINE L1 6965 7153 -808 1312 216 16 44 chr15 23058162 23058477 -78322044 - AluJo SINE Alu -6 306 1 982 257 120 14 chr15 23059887 23060245 -78320276 + MSTD LTR MaLR 1 396 0 474 120 0 0 chr15 23060494 23060569 -78319952 + (TA)n Simple_repeat Simple_repeat 1 75 0 1035 268 68 78 chr15 23061430 23062315 -78318206 - L1MEc LINE L1 -4110 2286 1411 370 214 0 12 chr15 23062316 23062400 -78318121 + MLT1A2 LTR MaLR 281 363 -11 309 307 84 46 chr15 23062591 23063044 -78317477 + L2 LINE L2 2808 3277 -36 1514 207 13 0 chr15 23063194 23063499 -78317022 - MLT1A1 LTR MaLR -2 363 55 319 280 19 0 chr15 23066503 23066610 -78313911 + L3 LINE CR1 1179 1287 -290 275 276 21 80 chr15 23067319 23067558 -78312963 + L1MC4 LINE L1 7455 7679 -363 406 266 114 45 chr15 23067687 23067977 -78312544 + L1MC4 LINE L1 7732 8041 -1 481 177 146 10 chr15 23068435 23068531 -78311990 - FRAM SINE Alu -25 151 43 613 175 0 10 chr15 23068656 23068759 -78311762 + AluJo SINE Alu 87 188 -124 506 206 10 0 chr15 23068757 23068859 -78311662 - AluJo/FLAM SINE Alu -209 103 1 * 359 265 31 95 chr15 23070277 23070594 -78309927 + L1M4 LINE L1 4896 5192 -954 1145 199 75 39 chr15 23070604 23070885 -78309636 + LTR40a LTR ERVL 229 519 0 252 284 30 67 chr15 23071064 23071198 -78309323 + HAL1 LINE L1 581 709 -1798 259 261 19 45 chr15 23071341 23071498 -78309023 + HAL1 LINE L1 926 1078 -1429 366 271 66 22 chr15 23071881 23072062 -78308459 + HAL1 LINE L1 1661 1849 -658 360 323 105 28 chr15 23072303 23072583 -78307938 + HAL1 LINE L1 2121 2435 -72 2111 143 0 0 chr15 23072583 23072877 -78307644 - AluSx SINE Alu -18 294 1 360 323 105 28 chr15 23072877 23072949 -78307572 + HAL1 LINE L1 2435 2500 -7 324 286 161 0 chr15 23074379 23074491 -78306030 - MIR SINE MIR -96 166 37 21 0 0 0 chr15 23075390 23075411 -78305110 + AT_rich Low_complexity Low_complexity 1 21 0 2386 244 63 49 chr15 23075419 23075745 -78304776 + L1MD1 LINE L1 27 347 -6193 2455 91 0 0 chr15 23075745 23076054 -78304467 - AluY SINE Alu -2 309 1 2386 244 63 49 chr15 23076054 23077084 -78303437 + L1MD1 LINE L1 347 1558 -4982 1792 240 41 21 chr15 23077135 23077751 -78302770 + L1M4 LINE L1 3544 4171 -1975 280 48 71 0 chr15 23077752 23077794 -78302727 + MER31A LTR ERV1 1 45 -440 1759 209 63 23 chr15 23077798 23078319 -78302202 + L1MCb LINE L1 603 1144 -4901 1432 245 57 33 chr15 23078372 23078911 -78301610 + L1M4 LINE L1 4431 4986 -1160 2532 37 0 3 chr15 23078911 23079210 -78301311 + AluY SINE Alu 1 298 -13 1432 245 57 33 chr15 23079210 23079245 -78301276 + L1M4 LINE L1 4986 5019 -1127 249 136 0 34 chr15 23079360 23079419 -78301102 + L1M LINE L1 5304 5360 -999 * 1759 270 46 16 chr15 23079405 23080206 -78300315 + L1MD1 LINE L1 4861 5685 -855 1423 246 35 22 chr15 23080206 23080609 -78299912 - MLT1D LTR MaLR -90 415 8 2063 183 27 11 chr15 23080612 23081060 -78299461 + L1MD1 LINE L1 6182 6636 0 258 253 40 0 chr15 23082045 23082120 -78298401 - MIR SINE MIR -111 151 74 324 196 0 0 chr15 23082309 23082365 -78298156 - MLT1D LTR MaLR -119 386 331 7262 235 55 51 chr15 23082377 23085588 -78294933 - L1M4 LINE L1 -1298 5346 2149 1981 128 0 11 chr15 23085588 23085898 -78294623 - AluY SINE Alu 0 308 2 7262 235 55 51 chr15 23085898 23086406 -78294115 - L1M4 LINE L1 -4495 2149 1644 778 0 31 0 chr15 23086406 23086503 -78294018 + (TAGA)n Simple_repeat Simple_repeat 3 102 0 7262 235 55 51 chr15 23086503 23088047 -78292474 - L1M4 LINE L1 -5000 1644 16 1630 196 0 7 chr15 23088719 23088999 -78291522 + AluJo SINE Alu 1 278 -34 219 36 0 0 chr15 23089005 23089033 -78291488 + (TAAA)n Simple_repeat Simple_repeat 2 29 0 1549 168 80 18 chr15 23089052 23089338 -78291183 + AluJb SINE Alu 9 312 0 2068 101 5 69 chr15 23089484 23089859 -78290662 + THE1A LTR MaLR 5 355 0 1651 219 83 59 chr15 23090328 23090904 -78289617 + LTR68 LTR ERV1 21 610 -130 459 214 68 48 chr15 23091255 23091507 -78289014 + HAL1 LINE L1 899 1155 -1352 3999 184 73 12 chr15 23091633 23092444 -78288077 - MER21B LTR ERV1 -3 860 1 2517 162 30 48 chr15 23092506 23093030 -78287491 + MLT2B3 LTR ERVL 1 515 -39 258 105 0 0 chr15 23093055 23093093 -78287428 + (TCTG)n Simple_repeat Simple_repeat 3 40 0 607 247 77 13 chr15 23093163 23093398 -78287123 + HAL1 LINE L1 1338 1587 -920 329 245 47 0 chr15 23093882 23093988 -78286533 + HAL1 LINE L1 2287 2397 -110 2110 122 0 7 chr15 23096148 23096474 -78284047 - AluSg SINE Alu 0 310 1 1521 236 29 52 chr15 23098946 23099717 -78280804 + L1MB3 LINE L1 2798 3550 -2596 * 2521 158 31 8 chr15 23099714 23100414 -78280107 + L1M1 LINE L1 4899 5614 -686 6063 207 37 23 chr15 23100470 23103034 -78277487 + L1MB3 LINE L1 3554 6160 -23 908 136 0 0 chr15 23103889 23104021 -78276500 - FLAM_C SINE Alu -11 132 1 2085 183 38 2 chr15 23104590 23105017 -78275504 - L1MB3 LINE L1 -120 6063 5622 559 279 47 12 chr15 23105736 23105908 -78274613 + MIR SINE MIR 37 214 -48 1878 178 67 13 chr15 23106471 23106859 -78273662 - L1MA5 LINE L1 -1 6299 5891 1871 179 68 0 chr15 23108503 23108839 -78271682 - MLT1A1 LTR MaLR -6 359 1 517 280 45 40 chr15 23109592 23109792 -78270729 + MIR SINE MIR 32 232 -30 3606 80 35 8 chr15 23109846 23110334 -78270187 - L1MA2 LINE L1 -2 6302 5802 365 259 0 0 chr15 23110377 23110458 -78270063 + MIR SINE MIR 34 114 -148 227 233 0 33 chr15 23111684 23111744 -78268777 - Charlie8 DNA MER1_type 0 2417 2360 1541 290 36 63 chr15 23112021 23112625 -78267896 + MLT1E LTR MaLR 1 588 -5 1479 236 44 35 chr15 23112678 23113132 -78267389 - MER39 LTR ERV1 0 707 250 207 336 71 18 chr15 23113642 23113755 -78266766 + L3 LINE CR1 618 736 -841 512 297 102 25 chr15 23114097 23114333 -78266188 + MIR SINE MIR 9 262 0 21 0 0 0 chr15 23114339 23114360 -78266161 + AT_rich Low_complexity Low_complexity 1 21 0 270 303 311 8 chr15 23114379 23114511 -78266010 + L3 LINE CR1 1282 1453 -124 625 264 25 0 chr15 23114924 23115083 -78265438 + MIR SINE MIR 28 190 -72 1454 192 17 118 chr15 23115084 23115490 -78265031 - MLT1A1 LTR MaLR 0 365 1 222 219 0 0 chr15 23115504 23115545 -78264976 + CT-rich Low_complexity Low_complexity 2 42 0 1757 200 63 25 chr15 23115795 23116241 -78264280 + MER31B LTR ERV1 1 543 0 22 88 0 0 chr15 23117807 23117864 -78262657 + AT_rich Low_complexity Low_complexity 1 57 0 239 200 178 30 chr15 23117864 23117999 -78262522 + L1MC/D LINE L1 3030 3184 -2962 2666 230 82 26 chr15 23118112 23119231 -78261290 + L1MC/D LINE L1 4399 5587 -772 216 0 0 0 chr15 23119231 23119255 -78261266 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 2666 230 82 26 chr15 23119255 23119289 -78261232 + L1MC/D LINE L1 5587 5618 -741 4498 246 126 58 chr15 23120508 23120848 -78259673 + L1MDa LINE L1 4 319 -6221 2013 113 10 7 chr15 23120848 23121139 -78259382 - AluSx SINE Alu -20 292 1 4498 246 126 58 chr15 23121139 23124022 -78256499 + L1MDa LINE L1 319 3432 -3108 727 174 0 9 chr15 23124023 23124138 -78256383 + 5S rRNA rRNA 2 115 -6 2245 169 125 5 chr15 23125433 23125841 -78254680 + MSTB2 LTR MaLR 1 457 0 869 260 174 0 chr15 23126016 23126297 -78254224 + MLT1F LTR MaLR 213 542 0 289 276 46 0 chr15 23126348 23126435 -78254086 - L2 LINE L2 -1 3312 3222 764 224 167 5 chr15 23127012 23127204 -78253317 + MER58A DNA MER1_type 2 224 0 2608 195 43 4 chr15 23127627 23128186 -78252335 + LTR69 LTR ERVL 1 581 -7 1839 211 49 0 chr15 23129220 23129628 -78250893 - L1MA6 LINE L1 0 6300 5873 204 254 16 0 chr15 23130203 23130266 -78250255 + (TA)n Simple_repeat Simple_repeat 2 65 0 1172 260 14 33 chr15 23131004 23131370 -78249151 + L1MEc LINE L1 36 394 -6002 * 3085 226 53 40 chr15 23131356 23132434 -78248087 + L1M4 LINE L1 2922 4013 -2133 1128 185 28 5 chr15 23132439 23132655 -78247866 + AluJo SINE Alu 79 299 -13 3975 222 93 18 chr15 23132661 23132691 -78247830 + L1M4 LINE L1 4023 4049 -2097 2278 120 0 0 chr15 23132691 23132999 -78247522 + AluSq SINE Alu 1 308 -5 3975 222 93 18 chr15 23132999 23133917 -78246604 + L1M4 LINE L1 4049 5076 -1070 2268 116 3 0 chr15 23133917 23134227 -78246294 + AluSp SINE Alu 3 313 0 3975 222 93 18 chr15 23134227 23134435 -78246086 + L1M4 LINE L1 5076 5267 -879 456 324 17 12 chr15 23134623 23134796 -78245725 - LTR10B LTR ERV1 0 505 332 1659 283 39 27 chr15 23135122 23135906 -78244615 - HERVI LTR ERV1 -1788 5836 4091 1194 59 13 0 chr15 23136138 23136290 -78244231 - AluY SINE Alu -4 307 154 23 68 0 0 chr15 23138454 23138498 -78242023 + AT_rich Low_complexity Low_complexity 1 44 0 257 135 19 0 chr15 23138516 23138568 -78241953 + (TA)n Simple_repeat Simple_repeat 2 54 0 341 312 127 12 chr15 23139202 23139375 -78241146 - HAL1 LINE L1 -605 1902 1710 842 168 15 0 chr15 23139406 23139543 -78240978 + MER2 DNA MER2_type 1 139 -206 282 242 45 15 chr15 23139538 23139604 -78240917 + MER2 DNA MER2_type 278 345 0 * 1904 171 68 11 chr15 23139635 23140004 -78240517 + MLT1B LTR MaLR 1 390 0 624 232 45 68 chr15 23141003 23141223 -78239298 + MER87 LTR ERV1 174 388 -153 2372 66 13 0 chr15 23141226 23141527 -78238994 - AluY SINE Alu -6 305 1 1276 162 42 37 chr15 23141528 23141769 -78238752 - MLT1D LTR MaLR -263 242 1 230 51 51 0 chr15 23142778 23142817 -78237704 + (TCTG)n Simple_repeat Simple_repeat 2 42 0 1812 197 70 12 chr15 23142896 23143241 -78237280 + MLT1A1 LTR MaLR 1 365 0 284 309 62 0 chr15 23144890 23144971 -78235550 + MIR3 SINE MIR 108 193 -15 2182 98 18 0 chr15 23146959 23147244 -78233277 + AluSx SINE Alu 1 290 -22 423 250 9 9 chr15 23147281 23147389 -78233132 + MER3 DNA MER1_type 78 185 -24 387 41 0 0 chr15 23148839 23148888 -78231633 + (TC)n Simple_repeat Simple_repeat 2 50 0 297 0 0 0 chr15 23148887 23148920 -78231601 + (TG)n Simple_repeat Simple_repeat 2 34 0 * 2177 152 6 30 chr15 23149717 23150078 -78230443 + THE1A LTR MaLR 4 355 0 468 181 0 0 chr15 23150449 23150521 -78230000 + AluJ/FLAM SINE Alu 2 73 -239 1295 183 65 48 chr15 23151433 23151877 -78228644 + MER89 LTR ERV1 9 559 0 401 304 190 27 chr15 23152879 23153248 -78227273 + MLT1J LTR MaLR 83 511 0 22 56 0 0 chr15 23155555 23155591 -78224930 + AT_rich Low_complexity Low_complexity 1 36 0 1169 136 61 24 chr15 23155750 23155963 -78224558 + MER65A LTR ERV1 1 221 -224 201 267 33 33 chr15 23355963 23356023 -78024498 + MIR3 SINE MIR 97 156 -52 978 115 0 7 chr15 23356150 23356289 -78024232 + AluJo SINE Alu 3 140 -172 247 344 21 0 chr15 23356304 23356400 -78024121 - LTR67 LTR ERVL -29 528 431 1817 182 70 3 chr15 23356414 23356730 -78023791 + L1MB8 LINE L1 5657 6026 -152 180 77 0 0 chr15 23356730 23356756 -78023765 + (TGGGGG)n Simple_repeat Simple_repeat 3 28 0 1817 182 70 3 chr15 23356756 23356864 -78023657 + L1MB8 LINE L1 6026 6125 -53 308 85 0 41 chr15 23356864 23356924 -78023597 - MADE1 DNA Mariner -41 39 1 909 171 0 11 chr15 23357647 23357823 -78022698 - L1MB3 LINE L1 -1 6182 6009 1567 195 0 3 chr15 23357842 23358144 -78022377 - AluSx SINE Alu -9 303 3 2851 224 31 27 chr15 23358321 23359269 -78021252 + L1P LINE L1 2318 3268 -2878 468 248 29 0 chr15 23360603 23360740 -78019781 - L1M4 LINE L1 -2109 4037 3897 698 183 122 28 chr15 23360741 23360921 -78019600 - MSTA LTR MaLR 0 428 232 393 100 238 0 chr15 23360923 23361003 -78019518 - MSTA LTR MaLR -329 99 1 4048 152 10 23 chr15 23361007 23361697 -78018824 - MSTA-int LTR MaLR -4 1576 896 462 206 319 58 chr15 23361852 23361939 -78018582 - MLT1E1 LTR MaLR -301 353 290 2389 73 3 22 chr15 23361939 23362256 -78018265 - AluY SINE Alu 0 311 1 462 206 319 58 chr15 23362256 23362444 -78018077 - MLT1E1 LTR MaLR -364 290 6 348 158 0 0 chr15 23362447 23362504 -78018017 + MER69 DNA AcHobo 2467 2523 -3 2094 116 0 23 chr15 23362704 23363007 -78017514 - AluSq SINE Alu -17 296 1 1511 194 38 3 chr15 23363010 23363303 -78017218 - AluJo SINE Alu -8 304 2 631 201 26 53 chr15 23363306 23363495 -78017026 + MER39 LTR ERV1 433 616 -91 258 105 0 0 chr15 23363497 23363535 -78016986 + (TCTCC)n Simple_repeat Simple_repeat 5 42 0 2136 110 0 7 chr15 23363535 23363817 -78016704 - AluSx SINE Alu -32 280 1 1127 266 31 40 chr15 23364447 23364872 -78015649 - MER90 LTR ERV1 -4 610 190 1949 116 3 20 chr15 23364874 23365177 -78015344 - AluY SINE Alu -11 300 3 354 154 15 0 chr15 23365277 23365342 -78015179 - AluS SINE Alu -236 67 2 339 167 167 0 chr15 23365343 23365415 -78015106 + Tigger5 DNA MER2_type 2240 2323 0 1754 128 39 0 chr15 23366218 23366499 -78014022 - AluY SINE Alu -9 302 11 1332 181 17 0 chr15 23366631 23366863 -78013658 + HERVL18 LTR ERVL 5812 6047 0 2065 153 35 75 chr15 23366928 23367300 -78013221 + LTR18A LTR ERVL 1 357 0 2161 93 0 64 chr15 23367316 23367628 -78012893 + AluSc SINE Alu 1 292 -17 354 267 193 0 chr15 23367797 23367932 -78012589 + MIR SINE MIR 49 209 -53 844 320 31 9 chr15 23367961 23368283 -78012238 + LTR16A LTR ERVL 18 346 -104 805 289 32 66 chr15 23368290 23368441 -78012080 + HERV16 LTR ERVL 2 157 -4839 2181 121 0 10 chr15 23368441 23368746 -78011775 + AluSx SINE Alu 1 302 -10 805 289 32 66 chr15 23368746 23368974 -78011547 + HERV16 LTR ERVL 157 368 -4628 1124 262 23 35 chr15 23369087 23369519 -78011002 + MER90 LTR ERV1 181 607 -7 1129 225 172 9 chr15 23370331 23370656 -78009865 - MER21B LTR ERV1 -459 404 27 443 205 13 0 chr15 23370694 23370772 -78009749 - MER21B LTR ERV1 -773 90 12 392 177 38 0 chr15 23371727 23371806 -78008715 + MER119 DNA MER1_type 501 582 -1 483 230 111 15 chr15 23371911 23372046 -78008475 - MER58A DNA MER1_type 0 148 1 305 287 41 33 chr15 23372641 23372763 -78007758 - MIR SINE MIR -70 192 70 34 93 0 0 chr15 23373017 23373114 -78007407 + AT_rich Low_complexity Low_complexity 1 97 0 1831 159 3 7 chr15 23373131 23373440 -78007081 - AluSg SINE Alu -2 308 1 1542 165 60 7 chr15 23373445 23373730 -78006791 - AluSx SINE Alu -12 300 1 192 40 0 0 chr15 23374221 23374246 -78006275 + (TG)n Simple_repeat Simple_repeat 2 26 0 1205 207 28 21 chr15 23374252 23374537 -78005984 - AluJo SINE Alu -21 291 5 201 39 0 0 chr15 23374675 23374701 -78005820 + (CA)n Simple_repeat Simple_repeat 2 27 0 1010 278 7 7 chr15 23375365 23375660 -78004861 - AluSq SINE Alu -8 295 1 11648 91 2 3 chr15 23376751 23378404 -78002117 - L1P LINE L1 -1673 4473 2822 1337 139 30 30 chr15 23379850 23380080 -78000441 + MER30 DNA MER1_type 1 230 0 460 282 42 0 chr15 23380171 23380313 -78000208 - L1MD3 LINE L1 -10 7985 7838 579 217 23 8 chr15 23380323 23380452 -78000069 + U8 snRNA snRNA 4 134 -2 311 139 82 180 chr15 23380497 23380676 -77999845 - L1MC3 LINE L1 -175 7820 7444 1770 143 0 0 chr15 23380704 23380969 -77999552 - AluSg SINE Alu -45 265 1 421 234 9 9 chr15 23381008 23381115 -77999406 - L1MD3 LINE L1 -325 7670 7564 457 303 16 20 chr15 23381498 23381742 -77998779 + L1MB7 LINE L1 5891 6133 -51 660 249 24 6 chr15 23382255 23382420 -77998101 + AluJb SINE Alu 115 282 -30 288 111 0 0 chr15 23382420 23382465 -77998056 + (TA)n Simple_repeat Simple_repeat 2 46 0 1252 253 28 22 chr15 23382466 23382830 -77997691 + L1MB2 LINE L1 5777 6142 -29 609 320 18 4 chr15 23383402 23383630 -77996891 - MLT1D LTR MaLR 0 505 275 357 193 68 0 chr15 23384859 23384947 -77995574 + MSTC LTR MaLR 1 94 -334 228 281 12 49 chr15 23385097 23385179 -77995342 - L2 LINE L2 -3 3269 3191 5719 70 1 4 chr15 23385862 23386581 -77993940 + L1PA3 LINE L1 5439 6155 0 1491 232 41 13 chr15 23386657 23387122 -77993399 - L1MDb LINE L1 -5264 1145 668 385 279 88 59 chr15 23387154 23387358 -77993163 - L1MDb LINE L1 -5934 475 266 395 217 153 21 chr15 23387368 23387557 -77992964 - L1MDb LINE L1 -6187 222 9 211 312 18 37 chr15 23387835 23387944 -77992577 + MER5C DNA MER1_type 18 124 -200 1404 145 188 59 chr15 23388409 23388653 -77991868 + MER47A DNA MER2_type 1 212 -2111 207 0 0 0 chr15 23388653 23388676 -77991845 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 2086 112 3 7 chr15 23388682 23388968 -77991553 - AluSp SINE Alu -28 285 1 1404 145 188 59 chr15 23388968 23389040 -77991481 + MER47A DNA MER2_type 216 366 0 2245 73 38 0 chr15 23389840 23390129 -77990392 - AluY SINE Alu -7 304 5 369 109 0 0 chr15 23390133 23390188 -77990333 + (T)n Simple_repeat Simple_repeat 1 55 0 21 89 0 0 chr15 23390714 23390770 -77989751 + AT_rich Low_complexity Low_complexity 1 56 0 28 0 0 0 chr15 23391047 23391075 -77989446 + AT_rich Low_complexity Low_complexity 1 28 0 24 67 0 0 chr15 23391332 23391377 -77989144 + AT_rich Low_complexity Low_complexity 1 45 0 190 243 108 40 chr15 23392478 23392552 -77987969 + MIR SINE MIR 184 262 0 2091 136 31 31 chr15 23392632 23392992 -77987529 + MLT1A1 LTR MaLR 6 365 0 3541 171 89 0 chr15 23393032 23393716 -77986805 + L1MB7 LINE L1 5377 6121 -63 233 250 140 0 chr15 23394595 23394695 -77985826 - L1M4 LINE L1 -1901 4245 4132 282 260 90 0 chr15 23394828 23394928 -77985593 - L1M4 LINE L1 -2231 3915 3807 3869 197 61 11 chr15 23394960 23395518 -77985003 - L1MB7 LINE L1 -19 6165 5636 2085 108 0 0 chr15 23395518 23395797 -77984724 - AluSx SINE Alu 0 312 34 3869 197 61 11 chr15 23395797 23396602 -77983919 - L1MB7 LINE L1 -548 5636 4735 294 213 27 0 chr15 23396640 23396715 -77983806 - MLT1J1 LTR MaLR 0 505 429 213 309 32 24 chr15 23396982 23397105 -77983416 + L2 LINE L2 2200 2323 -991 1202 245 128 22 chr15 23397167 23397580 -77982941 + MLT1E2 LTR MaLR 1 457 -169 2352 60 0 13 chr15 23397593 23397895 -77982626 + AluY SINE Alu 1 298 -13 183 369 18 18 chr15 23397991 23398102 -77982419 + L2 LINE L2 2952 3062 -251 948 92 23 8 chr15 23398545 23398675 -77981846 + AluSc SINE Alu 1 132 -177 1852 116 25 63 chr15 23398929 23399248 -77981273 + AluY SINE Alu 1 307 -4 320 265 131 29 chr15 23400147 23400392 -77980129 + L1MEd LINE L1 970 1239 -4880 46 46 0 46 chr15 23400503 23400611 -77979910 + AT_rich Low_complexity Low_complexity 1 103 0 320 268 76 82 chr15 23400875 23401203 -77979318 + L1M4 LINE L1 3630 3955 -2191 340 252 69 23 chr15 23401769 23401900 -77978621 - MLT1J1 LTR MaLR -167 279 143 1050 262 78 31 chr15 23401949 23402373 -77978148 - MLT1J1 LTR MaLR -2 444 1 7608 36 0 3 chr15 23402535 23403742 -77976779 + L1PA4 LINE L1 4951 6154 -1 523 222 62 11 chr15 23403833 23404023 -77976498 - MSTD LTR MaLR 0 396 178 2071 138 76 15 chr15 23404058 23404399 -77976122 - THE1B LTR MaLR -2 362 1 351 193 68 0 chr15 23404977 23405065 -77975456 + MSTC LTR MaLR 1 94 -334 2439 76 0 7 chr15 23406377 23406681 -77973840 + AluY SINE Alu 1 302 -9 2414 74 0 3 chr15 23406692 23406990 -77973531 + AluY SINE Alu 1 297 -14 522 249 103 56 chr15 23406991 23407224 -77973297 - L1MC4a LINE L1 -1520 6288 6045 441 268 89 89 chr15 23407269 23407377 -77973144 - MIR SINE MIR -14 248 141 1759 113 0 0 chr15 23407377 23407608 -77972913 - AluSx SINE Alu -24 288 58 441 268 89 89 chr15 23407608 23407723 -77972798 - MIR SINE MIR -120 142 25 1978 121 7 0 chr15 23408481 23408753 -77971768 + AluSq SINE Alu 35 308 -5 251 250 31 0 chr15 23408907 23408971 -77971550 - MLT1K LTR MaLR -39 549 484 223 341 8 76 chr15 23409207 23409339 -77971182 + MIR SINE MIR 24 146 -62 459 0 0 0 chr15 23409343 23409394 -77971127 + (TA)n Simple_repeat Simple_repeat 2 52 0 2456 90 0 0 chr15 23409394 23409705 -77970816 - AluY SINE Alu 0 311 1 454 194 21 0 chr15 23410303 23410396 -77970125 - MER103 DNA DNA -21 145 51 280 261 23 23 chr15 23410463 23410551 -77969970 + MER5C DNA MER1_type 37 124 -200 668 160 10 0 chr15 23411013 23411113 -77969408 + Tigger5 DNA MER2_type 1 101 -2222 413 104 78 13 chr15 23411104 23411181 -77969340 + Tigger5 DNA MER2_type 2088 2169 -154 * 905 126 0 4 chr15 23411287 23411521 -77969000 + (GA)n Simple_repeat Simple_repeat 1 232 0 1121 220 22 0 chr15 23411521 23411748 -77968773 - MSTB LTR MaLR -194 232 1 1757 170 22 41 chr15 23411856 23412221 -77968300 + L1MB3 LINE L1 5798 6155 -28 21 57 0 0 chr15 23412229 23412264 -77968257 + AT_rich Low_complexity Low_complexity 1 35 0 718 326 110 12 chr15 23412731 23413302 -77967219 + L1MC4a LINE L1 5256 5882 -1926 313 264 8 72 chr15 23413480 23413605 -77966916 - MLT1H LTR MaLR -238 311 195 782 334 46 13 chr15 23415264 23415673 -77964848 + ERVL LTR ERVL 2644 3111 -2638 2157 114 0 0 chr15 23415702 23416030 -77964491 + AluSg SINE Alu 1 328 0 1206 280 118 30 chr15 23416045 23416914 -77963607 + ERVL LTR ERVL 3229 4216 -1548 479 351 101 4 chr15 23417086 23417334 -77963187 + ERVL LTR ERVL 4769 5040 -724 1682 225 46 38 chr15 23417465 23417638 -77962883 + MLT1C LTR MaLR 3 173 -294 2440 71 7 0 chr15 23417638 23417935 -77962586 + AluY SINE Alu 1 299 -12 1682 225 46 38 chr15 23417935 23418214 -77962307 + MLT1C LTR MaLR 173 459 -8 413 266 0 9 chr15 23418218 23418327 -77962194 + ERVL LTR ERVL 5172 5279 -485 895 228 22 22 chr15 23418449 23418471 -77962050 + MER49 LTR ERV1 1 22 -901 1858 136 0 74 chr15 23418471 23418794 -77961727 + AluSx SINE Alu 1 299 -13 895 228 22 22 chr15 23418794 23418995 -77961526 + MER49 LTR ERV1 21 224 -699 357 82 0 0 chr15 23422300 23422349 -77958172 + (TG)n Simple_repeat Simple_repeat 1 49 0 6429 13 1 0 chr15 23422681 23423394 -77957127 + L1PA3 LINE L1 5442 6155 0 244 233 29 24 chr15 23425079 23425163 -77955358 - MIR SINE MIR -55 153 69 1642 167 7 24 chr15 23425215 23425509 -77955012 - AluJo SINE Alu -23 289 1 2135 188 28 2 chr15 23426341 23426777 -77953744 - L1 LINE L1 -2369 3777 3331 2180 84 7 7 chr15 23426780 23427077 -77953444 - AluY SINE Alu -10 301 5 369 43 0 0 chr15 23427088 23427135 -77953386 + (CA)n Simple_repeat Simple_repeat 2 48 0 22 56 0 0 chr15 23427232 23427268 -77953253 + GC_rich Low_complexity Low_complexity 1 36 0 1951 100 14 4 chr15 23428144 23428424 -77952097 + AluSq SINE Alu 1 283 -30 312 322 0 0 chr15 23428542 23428632 -77951889 + L1MC4 LINE L1 6614 6703 -1339 * 320 253 72 0 chr15 23428570 23428653 -77951868 - L1MC4 LINE L1 -1339 6703 6615 2353 98 0 19 chr15 23428705 23429022 -77951499 + AluSp SINE Alu 1 311 -2 2233 111 16 10 chr15 23429513 23429820 -77950701 + AluSx SINE Alu 1 309 -3 21 36 0 0 chr15 23429912 23429940 -77950581 + AT_rich Low_complexity Low_complexity 1 28 0 679 189 8 8 chr15 23429955 23430077 -77950444 + FLAM_C SINE Alu 6 127 -16 24 0 0 0 chr15 23430169 23430193 -77950328 + AT_rich Low_complexity Low_complexity 1 24 0 355 224 126 75 chr15 23430519 23430637 -77949884 + L1ME4a LINE L1 5743 5874 -247 2356 84 3 0 chr15 23430637 23430933 -77949588 + AluSp SINE Alu 1 297 -16 355 224 126 75 chr15 23430933 23430988 -77949533 + L1ME4a LINE L1 5874 5925 -196 2263 103 0 0 chr15 23431106 23431407 -77949114 + AluY SINE Alu 1 301 -10 21 0 0 0 chr15 23431639 23431660 -77948861 + AT_rich Low_complexity Low_complexity 1 21 0 32 26 0 0 chr15 23431962 23432001 -77948520 + AT_rich Low_complexity Low_complexity 1 39 0 2584 68 0 0 chr15 23435091 23435401 -77945120 - AluY SINE Alu -1 310 1 272 238 62 0 chr15 23435550 23435630 -77944891 + L1ME3 LINE L1 5550 5634 -536 641 256 84 9 chr15 23435633 23435848 -77944673 + L1ME3 LINE L1 5733 5963 -199 215 175 194 48 chr15 23437039 23437142 -77943379 + MIR SINE MIR 86 203 -59 1807 148 4 0 chr15 23437197 23437475 -77943046 + AluSx SINE Alu 1 279 -33 186 43 0 0 chr15 23437480 23437503 -77943018 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 2530 51 0 22 chr15 23437856 23438167 -77942354 - AluY SINE Alu -6 305 2 185 81 0 54 chr15 23439438 23439475 -77941046 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 894 241 96 35 chr15 23439736 23440131 -77940390 + LTR37A LTR ERV1 8 426 0 2170 92 0 60 chr15 23441161 23441478 -77939043 - AluY SINE Alu -13 298 1 312 226 60 45 chr15 23442192 23442325 -77938196 - HAL1b LINE L1 -22 1326 1192 736 156 43 0 chr15 23442334 23442512 -77938009 + AluYa5 SINE Alu 136 319 0 29 28 0 0 chr15 23442524 23442560 -77937961 + AT_rich Low_complexity Low_complexity 1 36 0 2149 94 3 7 chr15 23442810 23443119 -77937402 - AluY SINE Alu -3 308 1 865 195 48 68 chr15 23443290 23443541 -77936980 - MLT1A1 LTR MaLR 0 365 120 1415 229 31 14 chr15 23443803 23444161 -77936360 - MLT1A1 LTR MaLR 0 365 2 1306 107 0 19 chr15 23444184 23444389 -77936132 - AluY SINE Alu 0 311 111 237 270 0 0 chr15 23444614 23444626 -77935895 + L2 LINE L2 3251 3262 -51 2307 76 3 7 chr15 23444626 23444927 -77935594 + AluY SINE Alu 1 300 -11 237 270 0 0 chr15 23444927 23444977 -77935544 + L2 LINE L2 3261 3313 0 721 274 45 116 chr15 23445957 23446355 -77934166 + LTR16A LTR ERVL 68 437 -13 773 147 0 23 chr15 23446569 23446698 -77933823 + FLAM_C SINE Alu 1 126 -7 2272 118 0 0 chr15 23447678 23447983 -77932538 + AluSx SINE Alu 1 305 -7 184 313 24 12 chr15 23448182 23448265 -77932256 - L2 LINE L2 -2520 794 711 3652 119 2 4 chr15 23448659 23449165 -77931356 + MER1A DNA MER1_type 25 529 0 1727 199 48 22 chr15 23449459 23449815 -77930706 + MLT1A1 LTR MaLR 1 365 0 405 279 93 11 chr15 23449912 23450095 -77930426 - MIR SINE MIR -30 232 35 2275 112 21 3 chr15 23450369 23450708 -77929813 - L1PA10 LINE L1 -15 6153 5809 872 98 8 0 chr15 23450808 23450931 -77929590 - L1PA10 LINE L1 -357 5811 5688 1192 101 0 0 chr15 23450931 23451100 -77929421 + L1PA10 LINE L1 5518 5686 -482 2420 80 0 0 chr15 23452550 23452849 -77927672 - AluY SINE Alu -12 299 1 242 314 128 0 chr15 23453379 23453481 -77927040 - MIR SINE MIR 0 262 148 257 208 21 0 chr15 23453855 23453951 -77926570 + (TCTA)n Simple_repeat Simple_repeat 4 101 0 4885 125 23 19 chr15 23454558 23455334 -77925187 - MER4E LTR ERV1 0 779 1 25 0 0 0 chr15 23455574 23455599 -77924922 + AT_rich Low_complexity Low_complexity 1 25 0 2457 84 0 3 chr15 23455625 23455936 -77924585 + AluY SINE Alu 1 310 -1 22 35 0 0 chr15 23456285 23456314 -77924207 + AT_rich Low_complexity Low_complexity 1 29 0 1673 93 20 16 chr15 23458001 23458248 -77922273 - THE1C LTR MaLR -127 248 1 1723 144 60 7 chr15 23459120 23459405 -77921116 + AluSx SINE Alu 1 300 -12 2148 130 3 0 chr15 23459410 23459717 -77920804 + AluSg SINE Alu 1 308 -2 48 72 0 0 chr15 23459734 23459831 -77920690 + AT_rich Low_complexity Low_complexity 1 97 0 1930 101 31 11 chr15 23460084 23460370 -77920151 - AluY SINE Alu -14 297 6 24 67 0 0 chr15 23460802 23460847 -77919674 + AT_rich Low_complexity Low_complexity 1 45 0 1399 160 12 78 chr15 23462286 23462500 -77918021 - AluJo SINE Alu -2 310 124 1864 114 28 41 chr15 23462500 23462790 -77917731 + AluSp SINE Alu 2 287 -26 1399 160 12 78 chr15 23462790 23462907 -77917614 - AluJo SINE Alu -188 124 1 1760 135 14 17 chr15 23462941 23463238 -77917283 + AluSp SINE Alu 5 300 -13 550 196 9 0 chr15 23463238 23463350 -77917171 - AluJb SINE Alu -198 114 2 1679 145 23 16 chr15 23463385 23463688 -77916833 + AluSp SINE Alu 5 309 -4 284 136 0 0 chr15 23463688 23463732 -77916789 - AluJb SINE Alu -188 114 71 * 1510 226 91 39 chr15 23463723 23464162 -77916359 + MLT1D LTR MaLR 44 505 0 1767 194 28 33 chr15 23464701 23465097 -77915424 - L1MB2 LINE L1 0 6171 5778 381 43 0 0 chr15 23465097 23465144 -77915377 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 899 168 14 0 chr15 23465144 23465287 -77915234 - AluJb SINE Alu -30 282 138 1636 156 19 16 chr15 23465770 23466078 -77914443 - L1MB7 LINE L1 0 6184 5876 26 30 0 0 chr15 23469108 23469141 -77911380 + AT_rich Low_complexity Low_complexity 1 33 0 518 204 138 13 chr15 23469184 23469336 -77911185 - MIR SINE MIR -64 198 28 2038 109 13 33 chr15 23469489 23469792 -77910729 - AluSx SINE Alu -13 299 3 327 49 0 0 chr15 23470956 23470997 -77909524 + (TG)n Simple_repeat Simple_repeat 2 42 0 251 204 0 0 chr15 23471009 23471058 -77909463 + MIR SINE MIR 184 232 -30 933 249 127 33 chr15 23471088 23471602 -77908919 - HAL1 LINE L1 -877 1630 1069 592 236 126 95 chr15 23471603 23472078 -77908443 - MLT1H1 LTR MaLR 0 555 66 254 234 127 25 chr15 23472145 23472342 -77908179 - HAL1 LINE L1 -1437 1070 854 2324 109 3 0 chr15 23472369 23472672 -77907849 - AluSp SINE Alu -9 304 1 1876 138 10 31 chr15 23472736 23473064 -77907457 + AluJo SINE Alu 1 322 0 346 286 93 65 chr15 23473337 23473627 -77906894 - HAL1 LINE L1 -2167 340 43 902 217 37 28 chr15 23474010 23474227 -77906294 + MER20 DNA MER1_type 1 219 0 2483 63 0 13 chr15 23474357 23474656 -77905865 + AluY SINE Alu 5 299 -12 270 0 0 0 chr15 23475094 23475124 -77905397 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 2129 118 7 0 chr15 23475124 23475403 -77905118 - AluY SINE Alu -27 284 1 334 251 99 41 chr15 23478059 23478082 -77902439 + MIR SINE MIR 12 32 -230 2236 99 7 3 chr15 23478082 23478375 -77902146 + AluY SINE Alu 1 294 -17 334 251 99 41 chr15 23478375 23478522 -77901999 + MIR SINE MIR 32 192 -70 225 364 0 0 chr15 23479453 23479552 -77900969 + MIR SINE MIR 31 129 -79 268 275 73 18 chr15 23479616 23479725 -77900796 + L2 LINE L2 3194 3308 -5 225 364 0 0 chr15 23480432 23480531 -77899990 + MIR SINE MIR 31 129 -79 284 241 78 26 chr15 23480588 23480704 -77899817 + L2 LINE L2 3146 3267 -5 233 173 58 0 chr15 23482040 23482092 -77898429 + L1MC4a LINE L1 5885 5939 -1869 282 56 0 0 chr15 23482095 23482131 -77898390 + (TG)n Simple_repeat Simple_repeat 2 37 0 424 217 104 47 chr15 23482317 23482487 -77898034 + MIR SINE MIR 16 192 -58 1926 145 0 26 chr15 23484609 23484912 -77895609 + AluSx SINE Alu 3 297 -15 225 250 102 0 chr15 23484963 23485051 -77895470 + MIR SINE MIR 96 192 -70 917 175 0 18 chr15 23485757 23485923 -77894598 + 7SLRNA srpRNA srpRNA 95 257 -63 228 86 0 0 chr15 23487048 23487083 -77893438 + (TGGGGG)n Simple_repeat Simple_repeat 6 40 0 1953 89 0 98 chr15 23489282 23489607 -77890914 - AluSg SINE Alu -17 293 1 2300 74 0 3 chr15 23489788 23490109 -77890412 - AluY SINE Alu 0 320 1 1350 122 5 0 chr15 23490109 23490298 -77890223 + Charlie3 DNA MER1_type 2517 2706 -4 1304 146 5 0 chr15 23490300 23490520 -77890001 - L1MB3 LINE L1 -259 5924 5704 2067 130 0 3 chr15 23490595 23490880 -77889641 - AluSx SINE Alu -28 284 1 3666 197 46 20 chr15 23490880 23491839 -77888682 - L1MB3 LINE L1 -724 5460 4475 2425 86 0 0 chr15 23492090 23492393 -77888128 + AluY SINE Alu 1 303 -8 1680 155 17 24 chr15 23492530 23492820 -77887701 - AluJb SINE Alu -17 295 8 405 113 141 0 chr15 23492967 23493038 -77887483 - AluJ/FRAM SINE Alu -16 296 216 2039 85 0 0 chr15 23493303 23493550 -77886971 - AluSg SINE Alu -63 247 1 928 103 0 0 chr15 23494063 23494179 -77886342 + AluSq/x SINE Alu 1 116 -197 908 119 0 0 chr15 23494179 23494305 -77886216 + AluSc SINE Alu 166 291 -18 1165 155 5 0 chr15 23494305 23494492 -77886029 + AluSx SINE Alu 119 306 -4 252 299 41 0 chr15 23494590 23494687 -77885834 + MIR SINE MIR 92 192 -70 2457 86 0 13 chr15 23495663 23495978 -77884543 - AluY SINE Alu 0 311 1 1626 71 40 22 chr15 23496263 23496489 -77884032 + MER30 DNA MER1_type 1 230 0 972 155 42 237 chr15 23496580 23496730 -77883791 - L1MD3 LINE L1 -10 7985 7808 622 204 15 8 chr15 23496730 23496862 -77883659 + U8 snRNA snRNA 4 136 0 972 155 42 237 chr15 23496862 23497086 -77883435 - L1MD3 LINE L1 -187 7808 7542 195 42 0 0 chr15 23497086 23497110 -77883411 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2003 110 0 0 chr15 23497111 23497374 -77883147 - AluSg SINE Alu -47 263 1 972 155 42 237 chr15 23497374 23497520 -77883001 - L1MD3 LINE L1 -258 7737 7564 328 279 38 51 chr15 23497992 23498150 -77882371 + L2 LINE L2 3158 3313 0 23 33 0 0 chr15 23498243 23498273 -77882248 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr15 23499037 23499065 -77881456 + AT_rich Low_complexity Low_complexity 1 28 0 2095 119 3 0 chr15 23500446 23500740 -77879781 + AluSq SINE Alu 19 313 0 24 67 0 0 chr15 23501371 23501416 -77879105 + AT_rich Low_complexity Low_complexity 1 45 0 827 150 0 15 chr15 23501721 23501854 -77878667 - FLAM_C SINE Alu -1 132 2 299 270 134 41 chr15 23502175 23502388 -77878133 + MIR SINE MIR 3 225 -37 1857 79 126 14 chr15 23502388 23502666 -77877855 - AluY SINE Alu -2 309 1 406 306 32 24 chr15 23503628 23503876 -77876645 - L1ME LINE L1 -400 5721 5472 241 173 0 0 chr15 23503959 23504011 -77876510 - L1MB3 LINE L1 -14 6169 6118 1770 95 0 9 chr15 23504011 23504242 -77876279 + AluY SINE Alu 68 296 -15 338 128 56 17 chr15 23505579 23505817 -77874704 + (CA)n Simple_repeat Simple_repeat 1 247 0 220 150 68 15 chr15 23505843 23506111 -77874410 + (CA)n Simple_repeat Simple_repeat 1 282 0 267 119 68 8 chr15 23506125 23506243 -77874278 + (CA)n Simple_repeat Simple_repeat 2 126 0 964 217 83 24 chr15 23507049 23507302 -77873219 - L1MB8 LINE L1 0 6178 5911 243 0 0 0 chr15 23507814 23507841 -77872680 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1497 182 28 21 chr15 23507845 23508136 -77872385 - AluJo SINE Alu -19 293 1 201 39 0 0 chr15 23508270 23508296 -77872225 + (CA)n Simple_repeat Simple_repeat 2 27 0 22 0 0 0 chr15 23509218 23509240 -77871281 + AT_rich Low_complexity Low_complexity 1 22 0 329 256 99 16 chr15 23510170 23510291 -77870230 - MIR3 SINE MIR -40 168 38 1848 162 12 84 chr15 23511735 23512149 -77868372 - MLT1B LTR MaLR -4 386 3 924 199 49 29 chr15 23512502 23512748 -77867773 - MLT1A1 LTR MaLR -16 349 99 3121 213 81 39 chr15 23512789 23513556 -77866965 - MER21B LTR ERV1 -53 810 12 413 179 11 42 chr15 23513564 23513659 -77866862 - MLT1A1 LTR MaLR -269 105 14 2254 109 0 13 chr15 23514517 23514819 -77865702 - AluSg SINE Alu -12 298 1 1096 151 0 12 chr15 23515839 23516011 -77864510 + FRAM SINE Alu 1 40 0 870 205 0 18 chr15 23516596 23516767 -77863754 + FRAM SINE Alu 1 40 0 289 309 0 0 chr15 23517983 23518067 -77862454 + MIR3 SINE MIR 73 156 -52 480 230 111 15 chr15 23518693 23518828 -77861693 + MER58A DNA MER1_type 1 148 0 868 263 55 15 chr15 23518932 23519395 -77861126 - MER119 DNA MER1_type -1 582 5 183 146 122 0 chr15 23519420 23519461 -77861060 - MIR SINE MIR -69 139 94 204 40 0 0 chr15 23520790 23520815 -77859706 + (TTTTTA)n Simple_repeat Simple_repeat 6 30 0 1532 88 0 16 chr15 23521609 23521803 -77858718 - AluY SINE Alu -47 264 74 209 114 29 0 chr15 23522073 23522108 -77858413 + (TG)n Simple_repeat Simple_repeat 1 36 0 925 301 68 35 chr15 23522659 23523250 -77857271 - L1MC4a LINE L1 -1915 5893 5284 332 332 93 18 chr15 23523843 23524069 -77856452 - L1MC4a LINE L1 -1604 4542 4300 280 317 106 22 chr15 23524112 23524472 -77856049 - L1MC4a LINE L1 -1949 4197 3808 22 0 0 0 chr15 23524769 23524791 -77855730 + AT_rich Low_complexity Low_complexity 1 22 0 1383 171 95 29 chr15 23525854 23526046 -77854475 - L1MB3 LINE L1 -1 6182 5959 2163 131 0 3 chr15 23526046 23526352 -77854169 - AluSx SINE Alu -7 305 1 1383 171 95 29 chr15 23526352 23526475 -77854046 - L1MB3 LINE L1 -224 5959 5846 2126 99 16 59 chr15 23526479 23526802 -77853719 - AluSx SINE Alu -3 309 1 346 333 45 31 chr15 23526816 23527036 -77853485 - L1MC4a LINE L1 -3044 3102 2874 632 125 0 29 chr15 23527036 23527140 -77853381 - HY3 scRNA scRNA 0 101 1 346 333 45 31 chr15 23527140 23527276 -77853245 - L1MC4a LINE L1 -3272 2874 2741 2339 223 149 19 chr15 23527546 23528257 -77852264 - MER21B LTR ERV1 -31 832 40 437 205 13 0 chr15 23528296 23528374 -77852147 - MER21B LTR ERV1 -773 90 12 2283 99 0 0 chr15 23530765 23531058 -77849463 - AluSx SINE Alu -13 299 7 1770 168 36 0 chr15 23531063 23531372 -77849149 + MER44D DNA MER2_type 18 607 -2 2071 156 33 0 chr15 23532184 23532550 -77847971 + MLT1B LTR MaLR 2 379 -11 208 270 101 11 chr15 23532751 23532840 -77847681 - MIR SINE MIR -72 136 40 1140 121 0 0 chr15 23533056 23533213 -77847308 - AluSp SINE Alu -17 296 140 3699 135 7 35 chr15 23533437 23534045 -77846476 + MER49 LTR ERV1 333 923 0 576 191 18 12 chr15 23535005 23535173 -77845348 + (TATATG)n Simple_repeat Simple_repeat 2 170 0 2292 115 3 0 chr15 23536476 23536781 -77843740 - AluSq SINE Alu -5 308 3 2283 104 0 7 chr15 23536792 23537100 -77843421 - AluY SINE Alu -5 306 1 21946 196 46 5 chr15 23538397 23542565 -77837956 - ERVL LTR ERVL -788 4976 550 3187 252 53 26 chr15 23542703 23543946 -77836575 + L1M4 LINE L1 2626 3902 -2244 1866 137 181 8 chr15 23543946 23544311 -77836210 + MSTA LTR MaLR 1 428 0 10079 122 12 40 chr15 23544313 23545935 -77834586 + MSTA-int LTR MaLR 3 1580 0 409 113 238 0 chr15 23545935 23546015 -77834506 + MSTA LTR MaLR 1 99 -329 988 145 134 0 chr15 23546017 23546196 -77834325 + MSTA LTR MaLR 226 428 0 1284 253 6 10 chr15 23546196 23546508 -77834013 + L1M4 LINE L1 3898 4208 -1938 1317 253 118 36 chr15 23546511 23546629 -77833892 - MLT1D LTR MaLR 0 505 398 2214 151 28 13 chr15 23546629 23547019 -77833502 + MSTD LTR MaLR 1 396 0 1317 253 118 36 chr15 23547019 23547367 -77833154 - MLT1D LTR MaLR -107 398 1 429 320 30 13 chr15 23547371 23547671 -77832850 + L1M4 LINE L1 4211 4515 -1631 414 352 23 23 chr15 23547686 23547942 -77832579 + L1M4 LINE L1 106 361 -5594 1418 203 16 3 chr15 23548043 23548408 -77832113 + L1M4 LINE L1 3068 3437 -2597 636 266 18 9 chr15 23548528 23548757 -77831764 + L1M4 LINE L1 4173 4403 -1631 1047 322 93 23 chr15 23548772 23549464 -77831057 + L1M3a LINE L1 106 770 -5185 431 245 71 71 chr15 23549529 23549684 -77830837 + L1M3a LINE L1 635 789 -5166 2227 268 22 3 chr15 23549685 23550402 -77830119 + L1M3a LINE L1 2544 3274 -2760 1285 175 29 0 chr15 23550503 23550749 -77829772 + MLT1B LTR MaLR 127 379 -11 208 270 101 11 chr15 23550951 23551040 -77829481 - MIR SINE MIR -72 136 40 1140 121 0 0 chr15 23551256 23551413 -77829108 - AluSp SINE Alu -17 296 140 2234 117 0 0 chr15 23552145 23552445 -77828076 + AluSx SINE Alu 1 300 -12 45156 33 4 5 chr15 23553418 23559579 -77820942 + L1PA3 LINE L1 7 6155 0 1578 226 41 13 chr15 23559654 23560119 -77820402 - L1MDb LINE L1 -5264 1145 668 615 266 171 12 chr15 23560151 23560554 -77819967 - L1MDb LINE L1 -5934 475 9 2016 204 31 47 chr15 23561042 23561191 -77819330 + MER90 LTR ERV1 6 156 -458 2531 72 0 3 chr15 23561191 23561495 -77819026 + AluY SINE Alu 1 303 -8 2016 204 31 47 chr15 23561495 23561918 -77818603 + MER90 LTR ERV1 156 610 -4 2049 112 49 3 chr15 23562682 23562968 -77817553 - AluSx SINE Alu -13 299 1 235 145 72 58 chr15 23563310 23563379 -77817142 + MER53 DNA DNA 119 188 -1 1639 213 81 29 chr15 23564656 23565136 -77815385 - MLT1D LTR MaLR 0 505 1 333 229 35 83 chr15 23565800 23565914 -77814607 - MER5A DNA MER1_type -6 183 75 1790 139 40 7 chr15 23565914 23566230 -77814291 - AluY SINE Alu 0 326 2 333 229 35 83 chr15 23566230 23566258 -77814263 - MER5A DNA MER1_type -114 75 47 1751 118 129 26 chr15 23566301 23566641 -77813880 - THE1C LTR MaLR 0 375 1 1795 117 25 71 chr15 23568402 23568728 -77811793 + AluY SINE Alu 1 311 0 2109 104 3 32 chr15 23771421 23771729 -77608792 + AluSq SINE Alu 1 299 -14 257 331 40 24 chr15 23771739 23771863 -77608658 - L1M4 LINE L1 -970 5176 5051 1034 230 72 23 chr15 23772080 23772608 -77607913 + MLT1E LTR MaLR 1 593 0 258 231 68 26 chr15 23772636 23772753 -77607768 - L1M4 LINE L1 -1434 4712 4591 404 332 135 9 chr15 23773008 23773237 -77607284 - HAL1b LINE L1 -994 354 97 2431 66 0 10 chr15 23773344 23773648 -77606873 - AluY SINE Alu -10 301 1 906 300 142 51 chr15 23774078 23775217 -77605304 + L2 LINE L2 2071 3307 -6 917 242 106 124 chr15 23776511 23777354 -77603167 + L1MCb LINE L1 570 1400 -4851 2068 115 3 60 chr15 23777679 23777993 -77602528 + AluSp SINE Alu 1 296 -17 21 0 0 0 chr15 23778025 23778046 -77602475 + AT_rich Low_complexity Low_complexity 1 21 0 229 303 86 63 chr15 23778145 23778366 -77602155 - L2 LINE L2 -198 3074 2849 199 280 192 0 chr15 23778607 23778732 -77601789 - L2 LINE L2 -832 2482 2334 25 0 0 0 chr15 23779116 23779141 -77601380 + AT_rich Low_complexity Low_complexity 1 25 0 1147 286 89 42 chr15 23781082 23782082 -77598439 + L1MD2 LINE L1 806 1852 -4544 425 250 74 28 chr15 23782313 23782489 -77598032 + L1MD2 LINE L1 2448 2631 -3584 355 283 101 0 chr15 23782646 23782784 -77597737 + L1MD2 LINE L1 5014 5165 -1050 27 49 0 0 chr15 23782973 23783014 -77597507 + AT_rich Low_complexity Low_complexity 1 41 0 5305 196 95 33 chr15 23783068 23784597 -77595924 + L1MDa LINE L1 1025 2648 -3892 764 207 79 35 chr15 23784616 23784819 -77595702 + L1MD2 LINE L1 5758 5969 -459 236 271 86 14 chr15 23784957 23785027 -77595494 + L1M2a LINE L1 347 421 -6747 680 48 12 5 chr15 23785333 23785426 -77595095 - L1PA8A LINE L1 -257 5874 5792 1073 99 53 0 chr15 23785426 23785576 -77594945 + L1PA10 LINE L1 6009 6168 0 225 343 55 27 chr15 23786366 23786512 -77594009 - L2 LINE L2 0 3272 3123 35 24 0 0 chr15 23788434 23788476 -77592045 + AT_rich Low_complexity Low_complexity 1 42 0 279 220 258 68 chr15 23788702 23788834 -77591687 - MIR SINE MIR -18 244 88 22 0 0 0 chr15 23789495 23789517 -77591004 + AT_rich Low_complexity Low_complexity 1 22 0 216 233 33 17 chr15 23789778 23789838 -77590683 + MIR SINE MIR 82 142 -120 283 224 0 71 chr15 23791790 23791875 -77588646 + L1P5 LINE L1 5365 5443 -708 739 75 0 98 chr15 23791908 23792041 -77588480 + LTR9B LTR ERV1 441 560 -84 201 74 0 0 chr15 23792670 23792697 -77587824 + (CA)n Simple_repeat Simple_repeat 2 28 0 2156 93 0 84 chr15 23793441 23793774 -77586747 - AluSx SINE Alu -7 305 1 22 56 0 0 chr15 23793774 23793810 -77586711 + AT_rich Low_complexity Low_complexity 1 36 0 195 42 0 0 chr15 23796737 23796761 -77583760 + (A)n Simple_repeat Simple_repeat 1 24 0 2318 78 0 14 chr15 23797406 23797754 -77582767 - AluSq SINE Alu 0 313 1 209 105 0 26 chr15 23800608 23800646 -77579875 + (GGGAGA)n Simple_repeat Simple_repeat 6 42 0 2448 78 0 0 chr15 23802179 23802488 -77578033 - AluSg1 SINE Alu 0 309 1 304 374 107 0 chr15 23802866 23803053 -77577468 - MIR SINE MIR -24 238 32 2618 61 0 0 chr15 23803198 23803509 -77577012 - AluY SINE Alu 0 311 1 2416 47 4 0 chr15 23804434 23804713 -77575808 + L1PA5 LINE L1 5875 6154 0 872 281 35 24 chr15 23805847 23806135 -77574386 - MER93a LTR ERV1 0 402 112 1920 61 32 4 chr15 23806159 23806406 -77574115 + AluY SINE Alu 44 297 -14 275 168 8 107 chr15 23806409 23806540 -77573981 - FRAM SINE Alu -26 140 23 505 184 112 10 chr15 23806907 23807005 -77573516 - FLAM_C SINE Alu -34 109 2 2210 101 0 19 chr15 23807278 23807585 -77572936 + AluSg SINE Alu 9 309 -1 208 279 0 0 chr15 23807851 23807894 -77572627 - MER5A DNA MER1_type -84 105 63 281 182 159 23 chr15 23808109 23808197 -77572324 - MLT1J2 LTR MaLR 0 450 351 278 226 189 79 chr15 23808260 23808450 -77572071 - MLT1J2 LTR MaLR -218 232 22 205 200 147 40 chr15 23808554 23808629 -77571892 + MER5A DNA MER1_type 18 100 -89 1651 187 0 17 chr15 23810125 23810425 -77570096 + AluJo SINE Alu 3 297 -15 262 268 0 0 chr15 23811023 23811079 -77569442 + (CA)n Simple_repeat Simple_repeat 2 57 0 1176 222 58 81 chr15 23811153 23811746 -77568775 + MER67B LTR ERV1 1 350 -164 2852 126 24 9 chr15 23811836 23812257 -77568264 + MSTA LTR MaLR 2 428 0 2232 177 77 7 chr15 23812655 23813096 -77567425 + L1MB2 LINE L1 5693 6164 -7 220 320 13 0 chr15 23813335 23813410 -77567111 + L2 LINE L2 3195 3270 -2 2996 177 16 19 chr15 23815317 23815881 -77564640 - L1PA16 LINE L1 -19 6147 5586 345 288 58 14 chr15 23816009 23816148 -77564373 - MIR SINE MIR -41 221 77 295 322 40 40 chr15 23816274 23816476 -77564045 - MLT1J LTR MaLR -2 509 308 1787 181 0 0 chr15 23816567 23816905 -77563616 - AluJb SINE Alu 0 338 1 924 276 104 3 chr15 23817072 23817456 -77563065 - L1MDa LINE L1 -1450 5090 4668 440 323 32 14 chr15 23817573 23817793 -77562728 - L1M4 LINE L1 -2451 3695 3472 1699 256 64 26 chr15 23817867 23818509 -77562012 - L1MDa LINE L1 -1840 4700 4035 2358 271 63 14 chr15 23818521 23819520 -77561001 - L1MDa LINE L1 -3873 2848 1757 * 2878 233 49 19 chr15 23819519 23820263 -77560258 - L1ME1 LINE L1 -198 6037 5250 1455 193 68 17 chr15 23820263 23820558 -77559963 - AluJo SINE Alu -2 310 1 2878 233 49 19 chr15 23820558 23820845 -77559676 - L1ME1 LINE L1 -985 5250 4973 417 285 89 49 chr15 23820844 23821370 -77559151 - L1ME1 LINE L1 -4839 1557 1011 * 21 36 0 0 chr15 23821423 23821451 -77559070 + AT_rich Low_complexity Low_complexity 1 28 0 280 257 88 9 chr15 23822278 23822391 -77558130 - L1M4 LINE L1 -2366 3780 3659 611 220 113 0 chr15 23825346 23825514 -77555007 - MER20 DNA MER1_type 0 219 33 860 247 49 63 chr15 23826006 23826102 -77554419 + L1MEc LINE L1 20 116 -6280 2156 96 21 0 chr15 23826102 23826384 -77554137 + AluSp SINE Alu 4 291 -22 207 0 0 0 chr15 23826384 23826407 -77554114 + (GA)n Simple_repeat Simple_repeat 2 24 0 860 247 49 63 chr15 23826407 23826657 -77553864 + L1MEc LINE L1 114 362 -6034 659 270 44 0 chr15 23826668 23826872 -77553649 + L1MEc LINE L1 2231 2443 -3772 228 231 77 33 chr15 23826873 23826955 -77553566 - LTR38 LTR ERV1 0 556 468 2032 142 3 0 chr15 23826955 23827258 -77553263 - AluSx SINE Alu -8 304 1 447 322 0 0 chr15 23827293 23827439 -77553082 + L1MEc LINE L1 2441 2586 -3629 2337 68 65 0 chr15 23827462 23827755 -77552766 - L1PB1 LINE L1 -6 6145 5834 1443 260 37 12 chr15 23827758 23828246 -77552275 + L1M4 LINE L1 4674 5173 -973 261 289 59 40 chr15 23829041 23829091 -77551430 - L1MA10 LINE L1 0 6334 6285 2443 241 102 24 chr15 23829091 23830444 -77550077 - L1ME2 LINE L1 -38 6126 4407 1118 119 0 0 chr15 23830463 23830622 -77549899 - AluSg/x SINE Alu 0 312 154 2540 228 48 159 chr15 23830660 23831371 -77549150 - L1ME2 LINE L1 -1854 4292 3504 189 0 0 0 chr15 23831381 23831402 -77549119 + (TG)n Simple_repeat Simple_repeat 2 22 0 1619 201 7 0 chr15 23831402 23831699 -77548822 - AluJb SINE Alu -10 302 1 2540 228 48 159 chr15 23831699 23832051 -77548470 - L1ME2 LINE L1 -2642 3504 3115 326 175 0 0 chr15 23832051 23832114 -77548407 - Alu SINE Alu 0 302 240 2540 228 48 159 chr15 23832114 23833192 -77547329 - L1ME2 LINE L1 -3031 3115 2333 188 382 22 0 chr15 23834075 23834164 -77546357 - MIR SINE MIR -79 183 93 197 272 39 48 chr15 23834562 23834665 -77545856 + L2 LINE L2 2995 3096 -217 1589 189 150 14 chr15 23835234 23835668 -77544853 + LTR54B LTR ERV1 5 497 -1 1811 131 6 51 chr15 23837132 23837473 -77543048 - AluSq SINE Alu 0 313 1 5720 148 18 10 chr15 23837735 23838751 -77541770 + L1 LINE L1 3830 4853 -1293 2490 171 107 13 chr15 23840296 23840336 -77540185 - MLT2B2 LTR ERVL -4 511 476 917 173 11 148 chr15 23840336 23840613 -77539908 + MER8 DNA MER2_type 1 239 0 2490 171 107 13 chr15 23840613 23841039 -77539482 - MLT2B2 LTR ERVL -39 476 1 234 0 0 0 chr15 23842172 23842198 -77538323 + (CA)n Simple_repeat Simple_repeat 2 27 0 220 333 12 0 chr15 23843282 23843363 -77537158 - MIR3 SINE MIR -1 207 126 4405 200 50 22 chr15 23843376 23844821 -77535700 + L1MB4 LINE L1 4277 5761 -419 1914 157 47 18 chr15 23845006 23845388 -77535133 + L1MB4 LINE L1 5781 6173 -7 1911 275 72 31 chr15 23845388 23845670 -77534851 - L1M4 LINE L1 -1917 4229 3960 2173 112 0 17 chr15 23845670 23845965 -77534556 - AluSx SINE Alu -22 290 1 1911 275 72 31 chr15 23845965 23846709 -77533812 - L1M4 LINE L1 -2186 3960 3158 1238 276 165 12 chr15 23846725 23847363 -77533158 - L1M4 LINE L1 -3116 3030 2296 661 309 133 46 chr15 23847396 23847892 -77532629 - L2 LINE L2 -2617 697 159 404 325 24 8 chr15 23848134 23848257 -77532264 + L2 LINE L2 3137 3261 -11 409 207 6 11 chr15 23849666 23849845 -77530676 + (CA)n Simple_repeat Simple_repeat 2 179 0 346 203 11 22 chr15 23849893 23850075 -77530446 + (CA)n Simple_repeat Simple_repeat 1 180 0 882 291 96 34 chr15 23851353 23851800 -77528721 - LTR33 LTR ERVL 0 521 47 412 284 153 6 chr15 23851844 23852020 -77528501 - MLT1J2 LTR MaLR -246 204 3 1912 255 75 54 chr15 23853641 23854298 -77526223 - MER21B LTR ERV1 -92 771 96 2375 88 3 10 chr15 23854298 23854606 -77525915 + AluSp SINE Alu 1 306 -7 1912 255 75 54 chr15 23854606 23854686 -77525835 - MER21B LTR ERV1 -767 96 19 762 191 0 31 chr15 23856392 23856554 -77523967 + L1MC/D LINE L1 5456 5612 -630 394 252 25 23 chr15 23856554 23856731 -77523790 - HERVL74 LTR ERVL -2407 1230 982 1875 199 14 6 chr15 23857360 23857716 -77522805 - MLT1A1 LTR MaLR 0 365 7 2294 194 29 12 chr15 23858003 23858493 -77522028 - LTR53 LTR ERVL -2 517 20 2543 174 44 25 chr15 23859705 23860228 -77520293 + L1MA6 LINE L1 5767 6299 -1 637 233 8 0 chr15 23860247 23860376 -77520145 + MLT1C LTR MaLR 292 421 -46 22 0 0 0 chr15 23860376 23860398 -77520123 + AT_rich Low_complexity Low_complexity 1 22 0 316 273 47 35 chr15 23861997 23862169 -77518352 + L1M4 LINE L1 4536 4709 -1437 378 0 0 0 chr15 23862795 23862837 -77517684 + (TG)n Simple_repeat Simple_repeat 1 42 0 2773 160 36 5 chr15 23862925 23863368 -77517153 + MSTB2 LTR MaLR 1 457 0 1787 216 67 17 chr15 23863717 23864193 -77516328 + L1MDa LINE L1 1041 1540 -5000 1661 234 131 30 chr15 23864191 23864537 -77515984 - L1MDa LINE L1 -5899 641 331 * 288 0 0 0 chr15 23864537 23864569 -77515952 + (TG)n Simple_repeat Simple_repeat 2 33 0 1661 234 131 30 chr15 23864569 23864786 -77515735 - L1MDa LINE L1 -6209 331 21 776 257 48 0 chr15 23865611 23865817 -77514704 + MER20 DNA MER1_type 3 218 -1 3699 80 4 0 chr15 23865869 23866319 -77514202 - MLT2A2 LTR ERVL -1 452 1 2400 77 0 19 chr15 23866907 23867231 -77513290 - AluYb8 SINE Alu 0 318 1 30 0 0 0 chr15 23867358 23867388 -77513133 + AT_rich Low_complexity Low_complexity 1 30 0 1520 129 47 0 chr15 23867395 23867627 -77512894 + L1MA5A LINE L1 6044 6286 -11 788 234 0 25 chr15 23867944 23868138 -77512383 + FRAM SINE Alu 1 187 0 2531 147 9 104 chr15 23868603 23869133 -77511388 - LTR12 LTR ERV1 -234 480 1 560 261 30 0 chr15 23869199 23869333 -77511188 - MER21B LTR ERV1 -422 441 304 219 329 29 0 chr15 23869794 23869864 -77510657 - MIR3 SINE MIR -52 156 85 2576 57 0 13 chr15 23870122 23870437 -77510084 + AluY SINE Alu 1 311 0 23 33 0 0 chr15 23871111 23871141 -77509380 + AT_rich Low_complexity Low_complexity 1 30 0 228 238 0 0 chr15 23871396 23871459 -77509062 + L1MC4 LINE L1 7980 8042 0 478 305 97 55 chr15 23871459 23871572 -77508949 + L1M4 LINE L1 2260 2367 -3779 288 53 0 0 chr15 23871572 23871610 -77508911 + (CA)n Simple_repeat Simple_repeat 1 38 0 478 305 97 55 chr15 23871610 23871928 -77508593 + L1M4 LINE L1 2367 2741 -3405 934 245 84 25 chr15 23871928 23872250 -77508271 - MER58B DNA MER1_type 0 341 1 478 305 97 55 chr15 23872250 23872489 -77508032 + L1M4 LINE L1 2741 2969 -3177 34 0 0 0 chr15 23872507 23872541 -77507980 + AT_rich Low_complexity Low_complexity 1 34 0 3714 254 76 37 chr15 23872585 23873475 -77507046 + L1MC3 LINE L1 2335 3188 -3238 810 124 84 22 chr15 23873475 23873653 -77506868 + L1MA5A LINE L1 6100 6288 -9 2190 124 0 0 chr15 23873653 23873943 -77506578 - AluSp SINE Alu -23 290 1 3714 254 76 37 chr15 23873943 23874981 -77505540 + L1MC3 LINE L1 3187 4342 -2084 8300 229 56 27 chr15 23875006 23875934 -77504587 + L1MC3 LINE L1 4666 5565 -2500 2007 131 17 14 chr15 23875934 23876231 -77504290 + AluSx SINE Alu 1 298 -14 8300 229 56 27 chr15 23876231 23878232 -77502289 + L1MC3 LINE L1 5565 7722 -343 2425 62 3 0 chr15 23878232 23878522 -77501999 + AluY SINE Alu 5 295 -16 8300 229 56 27 chr15 23878522 23878870 -77501651 + L1MC3 LINE L1 7722 8058 -7 22 35 0 0 chr15 23879134 23879163 -77501358 + AT_rich Low_complexity Low_complexity 1 29 0 249 337 32 11 chr15 23880391 23880486 -77500035 - L2 LINE L2 -20 3293 3197 1260 152 13 0 chr15 23881029 23881260 -77499261 + L1MA4A LINE L1 6065 6298 -5 325 246 155 16 chr15 23884025 23884212 -77496309 + MER58C DNA MER1_type 1 213 -2 421 288 144 55 chr15 23884217 23884680 -77495841 + HAL1b LINE L1 65 1644 -824 343 221 54 69 chr15 23884986 23885190 -77495331 + HAL1b LINE L1 680 880 -468 343 340 44 6 chr15 23885321 23885480 -77495041 + MER20B DNA MER1_type 7 171 -612 349 347 52 38 chr15 23885872 23886350 -77494171 + L1M4 LINE L1 2488 2972 -3174 345 291 52 70 chr15 23887026 23887256 -77493265 + L1MEc LINE L1 661 886 -5510 351 265 61 39 chr15 23887263 23887493 -77493028 + L1MEc LINE L1 947 1181 -5037 368 128 21 32 chr15 23887568 23887662 -77492859 + GA-rich Low_complexity Low_complexity 3 95 0 1732 255 47 72 chr15 23887663 23889375 -77491146 + L1MEc LINE L1 1437 3051 -3164 1035 252 91 23 chr15 23889470 23889774 -77490747 + MLT2F LTR ERVL 185 467 -196 189 0 0 0 chr15 23889774 23889795 -77490726 + (CCTG)n Simple_repeat Simple_repeat 3 23 0 1035 252 91 23 chr15 23889795 23889871 -77490650 + MLT2F LTR ERVL 467 536 -127 414 0 0 0 chr15 23889871 23889917 -77490604 + (CA)n Simple_repeat Simple_repeat 1 46 0 300 27 0 0 chr15 23889916 23889953 -77490568 + (GA)n Simple_repeat Simple_repeat 2 38 0 * 1035 252 91 23 chr15 23889917 23890011 -77490510 + MLT2F LTR ERVL 536 654 -9 232 192 48 67 chr15 23890095 23890199 -77490322 - MLT1I LTR MaLR -59 350 249 983 106 0 0 chr15 23890229 23890361 -77490160 + AluY SINE Alu 1 132 -179 2315 74 0 0 chr15 23890366 23890680 -77489841 + AluY SINE Alu 1 314 0 182 264 57 0 chr15 23890813 23890866 -77489655 + L2 LINE L2 3256 3311 -2 294 333 72 31 chr15 23891499 23891817 -77488704 + L2 LINE L2 2398 2728 -586 722 319 83 27 chr15 23891853 23892260 -77488261 + L2 LINE L2 2864 3293 -20 713 251 79 20 chr15 23892392 23892735 -77487786 - Charlie2a DNA MER1_type -1589 1273 911 1978 146 7 7 chr15 23892900 23893202 -77487319 - AluSx SINE Alu -10 302 1 1217 146 59 14 chr15 23893723 23893943 -77486578 - MER30 DNA MER1_type 0 230 1 697 286 53 11 chr15 23894583 23894865 -77485656 - L1P3 LINE L1 -319 5853 5561 26 30 0 0 chr15 23895233 23895266 -77485255 + AT_rich Low_complexity Low_complexity 1 33 0 22 35 0 0 chr15 23895285 23895314 -77485207 + AT_rich Low_complexity Low_complexity 1 29 0 2097 138 0 0 chr15 23895510 23895806 -77484715 + AluSq SINE Alu 1 296 -17 231 236 14 28 chr15 23896527 23896599 -77483922 + GA-rich Low_complexity Low_complexity 4 74 0 24 32 0 0 chr15 23896694 23896725 -77483796 + AT_rich Low_complexity Low_complexity 1 31 0 236 294 0 0 chr15 23897651 23897743 -77482778 + Charlie2a DNA MER1_type 1401 1492 -1370 2266 107 7 0 chr15 23897843 23898143 -77482378 + AluSx SINE Alu 1 302 -10 348 225 117 0 chr15 23898211 23898322 -77482199 + L1MC4 LINE L1 7919 8042 0 1749 239 35 26 chr15 23898578 23899132 -77481389 + L1P3 LINE L1 2 545 -5330 22574 171 29 17 chr15 23899158 23904310 -77476211 + L1P3 LINE L1 430 5718 -743 25 31 0 0 chr15 23904792 23904824 -77475697 + AT_rich Low_complexity Low_complexity 1 32 0 2481 88 0 0 chr15 23907848 23908156 -77472365 + AluSc SINE Alu 1 308 -1 1928 138 31 7 chr15 23908795 23909084 -77471437 - AluSx SINE Alu -16 296 1 1155 201 17 8 chr15 23909660 23909899 -77470622 + MER4E LTR ERV1 539 779 0 1112 211 164 40 chr15 23910841 23911429 -77469092 + LTR48 LTR ERV1 1 644 0 598 221 7 107 chr15 23912691 23913131 -77467390 - L1M4 LINE L1 -2826 3320 2925 264 113 0 48 chr15 23914442 23914504 -77466017 + (TATTG)n Simple_repeat Simple_repeat 1 59 0 885 224 40 40 chr15 23914659 23914962 -77465559 - MLT1B LTR MaLR -87 303 1 335 196 145 58 chr15 23915012 23915150 -77465371 + L1ME2 LINE L1 5526 5675 -491 837 238 42 26 chr15 23915154 23915419 -77465102 - MSTC LTR MaLR -3 425 157 245 123 15 77 chr15 23915564 23915629 -77464892 - MSTC LTR MaLR -362 66 6 341 219 78 23 chr15 23915632 23915760 -77464761 + L1ME2 LINE L1 5668 5802 -364 200 89 67 0 chr15 23915851 23915896 -77464625 + (TA)n Simple_repeat Simple_repeat 2 49 0 201 147 0 0 chr15 23915941 23915975 -77464546 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 198 192 0 0 chr15 23915996 23916048 -77464473 + (TA)n Simple_repeat Simple_repeat 1 52 0 241 215 177 0 chr15 23916048 23916127 -77464394 + L1ME2 LINE L1 5844 5936 -228 366 307 15 0 chr15 23916162 23916299 -77464222 + L1MA10 LINE L1 6176 6314 -20 3816 143 29 47 chr15 23917551 23917834 -77462687 + L1MB3 LINE L1 5428 5715 -468 3515 132 23 30 chr15 23917834 23918441 -77462080 - LTR26 LTR ERV1 0 603 1 3816 143 29 47 chr15 23918441 23918925 -77461596 + L1MB3 LINE L1 5715 6181 -2 22 80 0 0 chr15 23918933 23918983 -77461538 + AT_rich Low_complexity Low_complexity 1 50 0 1288 159 40 36 chr15 23919178 23919401 -77461120 + L1MA5 LINE L1 6022 6248 -52 1949 107 3 58 chr15 23919401 23919710 -77460811 + AluSx SINE Alu 1 292 -20 1288 159 40 36 chr15 23919710 23919762 -77460759 + L1MA5 LINE L1 6248 6298 -2 596 285 16 36 chr15 23920609 23920802 -77459719 + MIR SINE MIR 44 232 -30 517 297 28 31 chr15 23921267 23921553 -77458968 + L1M4 LINE L1 4422 4706 -1440 5722 168 19 4 chr15 23921554 23922611 -77457910 - L1 LINE L1 -1428 4718 3646 3725 179 37 13 chr15 23922612 23923370 -77457151 + L1MA7 LINE L1 5516 6291 0 4134 152 197 20 chr15 23923453 23924743 -77455778 - pTR5 LTR ERV1 -1 2437 741 303 268 117 57 chr15 23924747 23925012 -77455509 + L1M4 LINE L1 4793 5073 -1073 192 152 0 0 chr15 23925885 23925918 -77454603 + A-rich Low_complexity Low_complexity 3 35 0 325 267 35 12 chr15 23926711 23926797 -77453724 + L1MC4 LINE L1 6614 6701 -1341 322 292 45 11 chr15 23926772 23926861 -77453660 - L1MC4 LINE L1 -1340 6702 6611 * 308 255 128 11 chr15 23927100 23927194 -77453327 + L1MC4 LINE L1 6601 6705 -1337 305 301 94 8 chr15 23927149 23927267 -77453254 - L1MC4 LINE L1 -1339 6703 6589 * 218 211 0 0 chr15 23927267 23927305 -77453216 + (CATATA)n Simple_repeat Simple_repeat 4 41 0 306 0 0 0 chr15 23928551 23928585 -77451936 + (CA)n Simple_repeat Simple_repeat 2 35 0 1735 142 14 0 chr15 23929232 23929520 -77451001 + L1MA8 LINE L1 4488 4779 -1367 894 192 12 6 chr15 23929520 23929692 -77450829 + AluJb SINE Alu 117 289 -23 333 0 0 0 chr15 23929694 23929731 -77450790 + (CA)n Simple_repeat Simple_repeat 2 38 0 3077 133 19 35 chr15 23929731 23930458 -77450063 + L1MA8 LINE L1 4790 5498 -793 3772 131 38 0 chr15 23930458 23931017 -77449504 - LTR19B LTR ERV1 0 580 1 3077 133 19 35 chr15 23931017 23931241 -77449280 + L1MA8 LINE L1 5498 5724 -567 3404 97 19 13 chr15 23931241 23931732 -77448789 - LTR15 LTR ERV1 0 595 1 1869 152 108 8 chr15 23931732 23932101 -77448420 + L1MA8 LINE L1 5721 6126 -165 379 127 89 0 chr15 23932104 23932183 -77448338 + L1 LINE L1 5200 5285 -861 1009 66 22 0 chr15 23932184 23932321 -77448200 + L1MA8 LINE L1 6127 6266 -25 1944 162 29 21 chr15 23933805 23934145 -77446376 + MLT2D LTR ERVL 31 373 -41 198 236 0 0 chr15 23934165 23934220 -77446301 + (TA)n Simple_repeat Simple_repeat 1 55 0 404 163 29 0 chr15 23934237 23934317 -77446204 - MLT2D LTR ERVL -40 480 301 213 261 0 0 chr15 23934317 23934363 -77446158 + (TA)n Simple_repeat Simple_repeat 1 46 0 27 29 0 0 chr15 23934599 23934633 -77445888 + AT_rich Low_complexity Low_complexity 1 34 0 480 275 8 23 chr15 23935790 23935921 -77444600 + L2 LINE L2 3144 3272 0 312 202 34 56 chr15 23935936 23936025 -77444496 + L1MCa LINE L1 2004 2090 -4336 3646 214 66 7 chr15 23937622 23938453 -77442068 + L1MC3 LINE L1 6395 7274 -511 375 287 65 57 chr15 23939105 23939335 -77441186 - MIR SINE MIR 0 262 31 1512 223 56 11 chr15 23939745 23940184 -77440337 - MER89 LTR ERV1 0 559 1 525 267 0 0 chr15 23940354 23940614 -77439907 + (CA)n Simple_repeat Simple_repeat 1 260 0 1743 174 0 7 chr15 23941408 23941706 -77438815 - AluJb SINE Alu -16 296 1 479 313 82 5 chr15 23941731 23941939 -77438582 + MER58A DNA MER1_type 1 224 0 1600 180 35 38 chr15 23942222 23942588 -77437933 + MLT1A1 LTR MaLR 1 365 0 1313 203 14 10 chr15 23943718 23944013 -77436508 + L1MA5 LINE L1 6005 6300 0 1009 275 66 22 chr15 23946476 23946883 -77433638 - LTR37A LTR ERV1 -1 425 1 524 234 85 21 chr15 23947274 23947415 -77433106 - MIR SINE MIR -6 256 107 327 234 0 0 chr15 23948576 23948640 -77431881 - L1MC4 LINE L1 -1339 6703 6640 1121 169 0 5 chr15 23948680 23948869 -77431652 - AluJo SINE Alu -39 273 86 212 300 80 10 chr15 23949319 23949419 -77431102 - MIR SINE MIR 0 262 156 955 196 174 42 chr15 23949420 23949685 -77430836 + MER92B LTR ERV1 1 300 -336 788 243 26 13 chr15 23949723 23949949 -77430572 + MER92B LTR ERV1 393 621 -15 302 212 40 22 chr15 23949960 23950053 -77430468 - MIR SINE MIR -58 150 63 1072 213 39 67 chr15 23950400 23950540 -77429981 + MLT1A1 LTR MaLR 1 143 -222 780 162 0 28 chr15 23950540 23950682 -77429839 - L1PA10 LINE L1 -6 6162 6025 1072 213 39 67 chr15 23950682 23950898 -77429623 + MLT1A1 LTR MaLR 143 347 -18 2701 235 31 10 chr15 23950952 23951556 -77428965 - MER82 DNA MER2_type -11 642 26 3173 128 41 41 chr15 23952449 23953057 -77427464 + MER4B LTR ERV1 1 779 0 1300 203 117 16 chr15 23953987 23954572 -77425949 + LTR48 LTR ERV1 1 644 0 549 200 0 10 chr15 23955552 23955652 -77424869 - MLT1A1 LTR MaLR 0 365 267 247 374 71 13 chr15 23955671 23955826 -77424695 + L2 LINE L2 3109 3272 0 450 284 14 27 chr15 23956359 23956507 -77424014 - MIR SINE MIR -54 208 63 303 293 72 83 chr15 23956705 23957067 -77423454 + MLT1I LTR MaLR 50 407 -2 355 296 71 33 chr15 23959863 23960103 -77420418 - MER34B LTR ERV1 0 565 317 1362 214 60 3 chr15 23961061 23961360 -77419161 + MER58B DNA MER1_type 26 341 0 2171 140 79 25 chr15 23961385 23961774 -77418747 + MSTC LTR MaLR 1 410 -18 1293 132 10 5 chr15 23961774 23961971 -77418550 + MSTA LTR MaLR 1 198 -230 1170 96 0 24 chr15 23961972 23962138 -77418383 + AluSp SINE Alu 138 299 -14 1576 130 13 4 chr15 23962140 23962378 -77418143 + MSTA LTR MaLR 189 428 0 3490 106 32 4 chr15 23962472 23962971 -77417550 + LTR10D LTR ERV1 1 513 0 308 152 70 13 chr15 23963847 23964005 -77416516 + (CA)n Simple_repeat Simple_repeat 1 167 0 424 213 40 29 chr15 23964046 23964220 -77416301 + (CA)n Simple_repeat Simple_repeat 1 176 0 217 145 32 0 chr15 23965120 23965182 -77415339 + (TA)n Simple_repeat Simple_repeat 2 65 0 464 304 34 14 chr15 23965228 23965376 -77415145 + L2 LINE L2 3162 3312 -1 2023 174 61 30 chr15 23966668 23967075 -77413446 + MSTB LTR MaLR 7 426 0 196 279 124 90 chr15 23967749 23967950 -77412571 + L3 LINE CR1 1312 1519 -58 5939 150 28 25 chr15 23968119 23969462 -77411059 - L1MA4A LINE L1 0 7005 5649 3837 193 60 9 chr15 23969462 23970334 -77410187 - L1MA4A LINE L1 -5933 916 1 450 265 74 37 chr15 23970477 23970692 -77409829 - L1ME LINE L1 -367 5754 5532 188 268 0 0 chr15 23971129 23971170 -77409351 - MIR SINE MIR -6 256 216 181 264 97 0 chr15 23971985 23972057 -77408464 + MIR SINE MIR 107 185 -77 215 0 0 62 chr15 23972111 23972143 -77408378 + (TTTTTG)n Simple_repeat Simple_repeat 1 30 0 2028 112 97 9 chr15 23972166 23972505 -77408016 + THE1C LTR MaLR 4 372 -3 21 0 0 0 chr15 23973323 23973344 -77407177 + AT_rich Low_complexity Low_complexity 1 21 0 659 191 64 0 chr15 23973780 23973921 -77406600 + L1MB3 LINE L1 6027 6176 -7 663 280 125 11 chr15 23974455 23974734 -77405787 - L1ME3A LINE L1 -199 5971 5661 243 0 0 0 chr15 23974887 23974914 -77405607 + (A)n Simple_repeat Simple_repeat 1 27 0 2215 199 64 42 chr15 23976145 23977322 -77403199 - L1M4c LINE L1 -4281 2365 920 450 68 122 40 chr15 23977322 23977396 -77403125 + THE1C LTR MaLR 1 80 -295 673 94 10 10 chr15 23977402 23977498 -77403023 + MSTA LTR MaLR 333 428 0 1628 290 55 70 chr15 23977498 23978435 -77402086 - L1M4c LINE L1 -5618 924 2 810 193 37 32 chr15 23978469 23978656 -77401865 + MLT1E2 LTR MaLR 1 188 -438 * 992 287 94 3 chr15 23978636 23978922 -77401599 + MLT1E2 LTR MaLR 315 626 0 2314 243 26 3 chr15 23978941 23979513 -77401008 + MLT1E2-int LTR MaLR 6 590 -781 1302 230 40 162 chr15 23979719 23980489 -77400032 + MLT1E2-int LTR MaLR 696 1371 0 1320 231 137 70 chr15 23980489 23981074 -77399447 + MLT1E2 LTR MaLR 1 624 -2 300 340 26 26 chr15 23981289 23981445 -77399076 - L2 LINE L2 -1 3271 3116 299 231 74 65 chr15 23981624 23981694 -77398827 - MER5A DNA MER1_type -1 188 115 3751 121 24 121 chr15 23981694 23982454 -77398067 + LTR12 LTR ERV1 3 688 0 299 231 74 65 chr15 23982454 23982491 -77398030 - MER5A DNA MER1_type -74 115 80 366 245 57 0 chr15 23982783 23982889 -77397632 + MLT1J LTR MaLR 58 169 -342 991 273 50 14 chr15 23983564 23983927 -77396594 - L1MD2 LINE L1 -10 6349 5974 * 2540 251 67 47 chr15 23983905 23985037 -77395484 - L1M4 LINE L1 -1610 4536 3382 3990 245 50 41 chr15 23985225 23986694 -77393827 - L1M4 LINE L1 -1744 4402 2920 264 113 0 48 chr15 23987993 23988055 -77392466 + (TATTG)n Simple_repeat Simple_repeat 1 59 0 1016 218 46 46 chr15 23988209 23988512 -77392009 - MLT1B LTR MaLR -87 303 1 390 158 162 77 chr15 23988539 23988698 -77391823 + L1ME2 LINE L1 5508 5675 -491 971 235 41 26 chr15 23988698 23988966 -77391555 - MSTC LTR MaLR 0 428 157 376 182 0 0 chr15 23989104 23989170 -77391351 - MSTC LTR MaLR -360 68 3 373 224 96 8 chr15 23989172 23989297 -77391224 + L1ME2 LINE L1 5671 5806 -360 31 44 0 0 chr15 23989381 23989426 -77391095 + AT_rich Low_complexity Low_complexity 1 45 0 201 147 0 0 chr15 23989471 23989505 -77391016 + (TATATG)n Simple_repeat Simple_repeat 3 36 0 198 192 0 0 chr15 23989526 23989578 -77390943 + (TA)n Simple_repeat Simple_repeat 1 52 0 273 215 177 0 chr15 23989578 23989657 -77390864 + L1ME2 LINE L1 5844 5936 -228 * 540 265 163 47 chr15 23989654 23989847 -77390674 + L1MA10 LINE L1 5956 6334 0 806 204 7 0 chr15 23990237 23990379 -77390142 + AluJb SINE Alu 136 278 -34 21 0 0 0 chr15 23990770 23990791 -77389730 + AT_rich Low_complexity Low_complexity 1 21 0 755 137 17 23 chr15 23991640 23991815 -77388706 + CT-rich Low_complexity Low_complexity 4 177 0 326 316 73 9 chr15 23991819 23991847 -77388674 + L2 LINE L2 3079 3104 -209 2103 132 6 3 chr15 23991847 23992158 -77388363 - AluSx SINE Alu 0 312 1 326 316 73 9 chr15 23992158 23992347 -77388174 + L2 LINE L2 3104 3310 -3 1437 177 20 96 chr15 23993177 23993584 -77386937 - MLT1B LTR MaLR -7 383 8 2194 118 30 0 chr15 23994310 23994614 -77385907 + AluSq SINE Alu 1 313 0 2132 112 0 3 chr15 23995030 23995359 -77385162 + AluSx SINE Alu 1 328 0 259 324 43 7 chr15 23995513 23995652 -77384869 + MLT1J LTR MaLR 54 197 -314 409 82 0 0 chr15 23995713 23995794 -77384727 + L1PA5 LINE L1 6068 6131 0 249 310 26 9 chr15 23995801 23995914 -77384607 + MLT1J LTR MaLR 389 503 -8 578 189 9 0 chr15 23996873 23996979 -77383542 - MLT1D LTR MaLR -376 129 23 1823 263 56 68 chr15 23997001 23997681 -77382840 - MLT1D-int LTR MaLR -8 1363 692 1686 227 107 71 chr15 23997844 23998464 -77382057 - MLT1D-int LTR MaLR -727 644 3 228 200 0 0 chr15 23998467 23998507 -77382014 - MLT1D LTR MaLR 0 626 587 279 243 27 10 chr15 23998518 23998614 -77381907 - MLT1D LTR MaLR -111 394 317 238 200 0 0 chr15 23998742 23998787 -77381734 - MLT1D LTR MaLR -459 46 2 1496 201 64 38 chr15 23998929 23999348 -77381173 - MER21B LTR ERV1 -58 805 376 1672 242 55 21 chr15 23999351 23999748 -77380773 - MER21B LTR ERV1 -427 436 23 414 0 0 0 chr15 23999748 23999794 -77380727 + (TA)n Simple_repeat Simple_repeat 2 47 0 1672 242 55 21 chr15 23999794 23999818 -77380703 - MER21B LTR ERV1 -840 23 1 301 315 16 8 chr15 23999937 24000064 -77380457 + MLT1L LTR MaLR 483 610 -5 272 314 58 0 chr15 24002644 24002730 -77377791 + L2 LINE L2 3213 3303 -10 26 0 0 0 chr15 24002730 24002756 -77377765 + AT_rich Low_complexity Low_complexity 1 26 0 34 55 0 0 chr15 24002836 24002891 -77377630 + AT_rich Low_complexity Low_complexity 1 55 0 2005 135 28 0 chr15 24002895 24003184 -77377337 + AluSg SINE Alu 1 297 -13 2309 238 26 42 chr15 24003210 24003824 -77376697 + L1M3e LINE L1 467 1070 -6419 3331 230 24 25 chr15 24003825 24004743 -77375778 + L1M3e LINE L1 2019 2864 -4701 205 0 114 0 chr15 24004743 24004778 -77375743 + A-rich Low_complexity Low_complexity 2 40 0 3331 230 24 25 chr15 24004778 24004981 -77375540 + L1M3e LINE L1 2864 3066 -4499 623 235 31 0 chr15 24004980 24005142 -77375379 + L1MA8 LINE L1 6125 6291 0 * 25 31 0 0 chr15 24005170 24005202 -77375319 + AT_rich Low_complexity Low_complexity 1 32 0 243 225 75 38 chr15 24005249 24005329 -77375192 + L1ME2 LINE L1 4 86 -5984 1484 276 161 29 chr15 24005773 24006823 -77373698 + L1ME2 LINE L1 3950 5138 -942 1348 285 81 37 chr15 24006830 24007469 -77373052 + L1ME2 LINE L1 5193 5865 -233 2289 47 54 0 chr15 24007469 24007747 -77372774 + AluY SINE Alu 1 293 -18 1348 285 81 37 chr15 24007747 24007788 -77372733 + L1ME2 LINE L1 5865 5903 -195 2487 90 0 0 chr15 24008448 24008760 -77371761 - AluSx SINE Alu 0 312 1 180 357 108 8 chr15 24009549 24009678 -77370843 - L2 LINE L2 -4 3268 3127 308 263 26 53 chr15 24011717 24011813 -77368708 + MER92C LTR ERV1 230 322 -232 4883 145 56 18 chr15 24011813 24012117 -77368404 + MER4D LTR ERV1 1 292 -611 3433 133 27 15 chr15 24012117 24012664 -77367857 - MER41C LTR ERV1 0 554 1 4883 145 56 18 chr15 24012664 24013229 -77367292 + MER4D LTR ERV1 292 903 0 2137 115 0 17 chr15 24013247 24013568 -77366953 + AluSg SINE Alu 1 316 0 622 269 42 23 chr15 24013577 24013793 -77366728 + MER92C LTR ERV1 308 527 -27 3553 225 130 27 chr15 24014710 24016372 -77364149 + L1MDb LINE L1 7 1865 -4541 1504 292 36 8 chr15 24016384 24016969 -77363552 + L1M4 LINE L1 4128 4728 -1418 320 217 0 0 chr15 24017698 24017767 -77362754 - LTR30 LTR ERV1 -102 620 552 1809 102 61 41 chr15 24017768 24018199 -77362322 - LTR12 LTR ERV1 -406 2032 1 2472 104 52 0 chr15 24018199 24018546 -77361975 - HERV9 LTR ERV1 0 8399 8035 849 198 119 18 chr15 24018574 24018801 -77361720 - LTR32 LTR ERVL -51 420 171 589 179 71 50 chr15 24019110 24019250 -77361271 - LTR32 LTR ERVL -286 185 43 569 186 39 0 chr15 24019287 24019443 -77361078 + Charlie5 DNA MER1_type 2389 2550 -62 3985 126 5 44 chr15 24019510 24019788 -77360733 + MER41B LTR ERV1 1 288 -347 4384 100 28 15 chr15 24019788 24020440 -77360081 - PABL_A LTR ERV1 0 660 1 3985 126 5 44 chr15 24020440 24020821 -77359700 + MER41B LTR ERV1 288 634 -1 563 265 45 54 chr15 24020852 24021075 -77359446 - MER58A DNA MER1_type -3 221 1 271 248 8 8 chr15 24021351 24021468 -77359053 + CT-rich Low_complexity Low_complexity 1 117 0 205 155 35 0 chr15 24021501 24021559 -77358962 + CT-rich Low_complexity Low_complexity 1 60 0 934 221 13 32 chr15 24022003 24022364 -77358157 - L1M LINE L1 -743 5403 5076 201 342 75 20 chr15 24022485 24022780 -77357741 - L2 LINE L2 -2051 1263 865 2365 70 0 13 chr15 24022979 24023293 -77357228 + AluY SINE Alu 1 310 -1 218 173 58 58 chr15 24023830 24023882 -77356639 - MIR SINE MIR -134 74 23 189 121 69 138 chr15 24025132 24025190 -77355331 - L2 LINE L2 -947 2367 2314 311 288 102 34 chr15 24026851 24027028 -77353493 - MIR SINE MIR -13 249 61 517 273 87 6 chr15 24027111 24027272 -77353249 + MIR SINE MIR 48 221 -41 1040 187 21 0 chr15 24027405 24027604 -77352917 + L1PB4 LINE L1 5743 5949 -207 490 222 88 107 chr15 24027606 24027947 -77352574 - LTR58 LTR ERV1 0 670 350 316 224 90 0 chr15 24028145 24028212 -77352309 - LTR35 LTR ERV1 -543 75 3 1188 141 50 0 chr15 24028212 24028411 -77352110 + L1PB4 LINE L1 5948 6156 0 1974 234 64 84 chr15 24028413 24028473 -77352048 - L1MDa LINE L1 -1241 5299 5239 606 245 99 0 chr15 24028473 24028624 -77351897 + FAM SINE Alu 2 167 -8 1974 234 64 84 chr15 24028624 24029475 -77351046 - L1MDa LINE L1 -1301 5239 4407 2775 233 50 92 chr15 24029480 24030391 -77350130 - L1MDa LINE L1 -2450 4090 3262 185 32 0 65 chr15 24030391 24030422 -77350099 + (CAAAT)n Simple_repeat Simple_repeat 1 29 0 2775 233 50 92 chr15 24030422 24030994 -77349527 - L1MDa LINE L1 -3278 3262 2668 4010 188 92 11 chr15 24031007 24032004 -77348517 - L1MDa LINE L1 -4384 2156 1079 1478 236 118 25 chr15 24032003 24032477 -77348044 - L1MDa LINE L1 -6016 524 7 * 280 289 12 35 chr15 24032830 24033003 -77347518 + (CACCC)n Simple_repeat Simple_repeat 2 170 0 1684 147 3 18 chr15 24033599 24033885 -77346636 + AluSx SINE Alu 1 282 -30 582 60 0 0 chr15 24033886 24033969 -77346552 + (TAGA)n Simple_repeat Simple_repeat 4 86 0 442 279 75 30 chr15 24034401 24034602 -77345919 + L1MC3 LINE L1 5431 5640 -481 349 258 66 101 chr15 24034613 24034811 -77345710 + L1MC3 LINE L1 5718 5908 -1900 2220 94 3 7 chr15 24034853 24035162 -77345359 + AluSp SINE Alu 1 308 -5 3752 133 38 0 chr15 24036213 24036792 -77343729 + LTR26 LTR ERV1 3 603 0 2098 110 3 0 chr15 24037115 24037405 -77343116 + AluSx SINE Alu 6 296 -16 903 237 34 17 chr15 24037695 24037931 -77342590 + LTR40b LTR ERVL 1 240 -222 475 205 188 0 chr15 24037957 24038069 -77342452 + LTR40b LTR ERVL 312 444 -18 314 229 43 0 chr15 24038111 24038181 -77342340 + MIR SINE MIR 120 192 -70 5250 211 58 27 chr15 24038435 24039701 -77340820 + L1MC3 LINE L1 6312 7616 -169 353 359 6 6 chr15 24040363 24040519 -77340002 + (CA)n Simple_repeat Simple_repeat 2 157 0 201 175 0 0 chr15 24040531 24040571 -77339950 + (CA)n Simple_repeat Simple_repeat 1 40 0 203 276 10 0 chr15 24040665 24040763 -77339758 + (CATA)n Simple_repeat Simple_repeat 4 102 0 300 262 12 12 chr15 24040776 24040860 -77339661 + (CA)n Simple_repeat Simple_repeat 2 85 0 463 255 9 9 chr15 24040942 24041048 -77339473 - MER58A DNA MER1_type 0 142 37 1065 273 105 19 chr15 24041071 24042307 -77338214 - L1ME3A LINE L1 -18 6152 4696 201 175 0 0 chr15 24042323 24042363 -77338158 + GA-rich Low_complexity Low_complexity 2 41 0 2170 123 0 0 chr15 24043089 24043397 -77337124 + AluSq SINE Alu 4 311 -2 200 281 99 47 chr15 24045847 24046039 -77334482 + L2 LINE L2 2682 2883 -431 285 309 12 0 chr15 24047135 24047216 -77333305 + L3 LINE CR1 1346 1427 -150 6535 164 19 11 chr15 24048021 24050237 -77330284 + L1PB2 LINE L1 3920 6151 0 285 265 0 14 chr15 24050454 24050553 -77329968 + MIR SINE MIR 77 170 -38 237 221 0 0 chr15 24052094 24052162 -77328359 + (CA)n Simple_repeat Simple_repeat 1 68 0 1237 187 14 28 chr15 24052620 24052909 -77327612 - L1MA4 LINE L1 -7 6293 6009 23 88 0 0 chr15 24053360 24053394 -77327127 + AT_rich Low_complexity Low_complexity 1 34 0 32 43 0 0 chr15 24053441 24053487 -77327034 + AT_rich Low_complexity Low_complexity 1 46 0 322 268 192 56 chr15 24055058 24055190 -77325331 - MIR SINE MIR -30 232 63 216 0 0 0 chr15 24055190 24055214 -77325307 + (CA)n Simple_repeat Simple_repeat 1 24 0 322 268 192 56 chr15 24055214 24055279 -77325242 - MIR SINE MIR -199 63 8 303 248 53 60 chr15 24058054 24058187 -77322334 + L1MEd LINE L1 957 1088 -5031 227 290 21 43 chr15 24058229 24058322 -77322199 + LTR67 LTR ERVL 78 168 -389 282 294 178 33 chr15 24058591 24058771 -77321750 + ERVL LTR ERVL 2385 2590 -3174 235 258 88 25 chr15 24058800 24058959 -77321562 + L1M4 LINE L1 4541 4709 -1437 312 304 64 41 chr15 24059249 24059469 -77321052 + L1MEd LINE L1 3021 3245 -2884 2133 94 0 0 chr15 24059855 24060142 -77320379 + AluSc SINE Alu 15 301 -8 1795 119 60 11 chr15 24061669 24061954 -77318567 - AluSx SINE Alu -13 299 1 2609 241 35 52 chr15 24062787 24063533 -77316988 + MER21B LTR ERV1 19 751 -112 292 212 0 15 chr15 24063972 24064038 -77316483 - MLT1K LTR MaLR 0 588 524 237 258 52 52 chr15 24064086 24064183 -77316338 + MLT1G1 LTR MaLR 1 97 -498 245 230 50 30 chr15 24064356 24064471 -77316050 + MLT1H LTR MaLR 437 590 0 279 133 13 40 chr15 24065251 24065326 -77315195 + T-rich Low_complexity Low_complexity 3 75 0 195 42 0 0 chr15 24066759 24066783 -77313738 + (A)n Simple_repeat Simple_repeat 1 24 0 723 314 97 75 chr15 24067132 24067959 -77312562 + HAL1b LINE L1 1 845 -503 570 286 114 87 chr15 24068000 24068727 -77311794 + L1M2 LINE L1 2614 3387 -3461 22 0 0 0 chr15 24068785 24068807 -77311714 + AT_rich Low_complexity Low_complexity 1 22 0 250 286 87 29 chr15 24068807 24069292 -77311229 + L1M2 LINE L1 3516 4054 -2794 1232 237 26 66 chr15 24069393 24069895 -77310626 + L1ME4a LINE L1 4746 5227 -919 2399 213 59 0 chr15 24069902 24070408 -77310113 + L1MD1 LINE L1 5707 6242 0 521 307 164 17 chr15 24070570 24071101 -77309420 + L1ME4a LINE L1 5287 5895 -226 284 293 30 10 chr15 24071145 24071244 -77309277 + L1ME4a LINE L1 5964 6064 -57 881 173 0 14 chr15 24073398 24073767 -77306754 + CT-rich Low_complexity Low_complexity 1 363 0 194 88 0 29 chr15 24073769 24073803 -77306718 + (TTCC)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr15 24074041 24074062 -77306459 + AT_rich Low_complexity Low_complexity 1 21 0 189 154 0 0 chr15 24074956 24074995 -77305526 + (CTA)n Simple_repeat Simple_repeat 2 40 0 2343 92 7 3 chr15 24075216 24075522 -77304999 + AluSc SINE Alu 1 307 -2 582 255 64 21 chr15 24076192 24076380 -77304141 - MIR SINE MIR -11 251 56 1631 181 28 39 chr15 24077248 24077635 -77302886 + MLT1B LTR MaLR 1 383 -7 402 39 0 0 chr15 24077717 24077769 -77302752 + (TG)n Simple_repeat Simple_repeat 2 53 0 1351 217 95 0 chr15 24078278 24078624 -77301897 - MLT1B LTR MaLR -11 379 1 239 265 12 12 chr15 24078941 24079024 -77301497 + CT-rich Low_complexity Low_complexity 1 83 0 229 305 78 39 chr15 24081537 24081665 -77298856 - MIR SINE MIR -18 244 112 2869 221 18 15 chr15 24081754 24082559 -77297962 - L1 LINE L1 -3324 3058 2244 729 127 25 0 chr15 24082559 24082677 -77297844 + L1MB1 LINE L1 6048 6168 0 386 215 68 61 chr15 24083215 24083378 -77297143 + MER103 DNA DNA 1 164 -2 233 333 143 0 chr15 24083828 24083975 -77296546 - L3 LINE CR1 -236 1341 1174 223 297 27 63 chr15 24084456 24084567 -77295954 - MIR3 SINE MIR -6 202 96 299 305 23 23 chr15 24084572 24084703 -77295818 - L2 LINE L2 -1 3312 3182 406 344 66 35 chr15 24086047 24086530 -77293991 + L1MCc LINE L1 40 537 -5886 1633 268 93 22 chr15 24086648 24087904 -77292617 + L1MCc LINE L1 830 2179 -4762 1058 180 0 0 chr15 24087902 24088096 -77292425 + L1M4 LINE L1 5620 5813 -361 * 2760 207 23 16 chr15 24088093 24088707 -77291814 + L1MB5 LINE L1 5344 5961 -213 6996 254 84 46 chr15 24088713 24092150 -77288371 - L1M4c LINE L1 -1188 5194 1515 1426 225 169 6 chr15 24092352 24093410 -77287111 + L1ME1 LINE L1 4853 6137 -29 1518 167 8 8 chr15 24093514 24093759 -77286762 - AluJo SINE Alu -67 245 1 23 0 0 0 chr15 24093762 24093785 -77286736 + AT_rich Low_complexity Low_complexity 1 23 0 1033 268 77 18 chr15 24093860 24094319 -77286202 + L1ME1 LINE L1 5663 6144 -22 225 154 0 0 chr15 24094864 24094903 -77285618 + T-rich Low_complexity Low_complexity 4 42 0 232 190 35 0 chr15 24094904 24094962 -77285559 + CT-rich Low_complexity Low_complexity 3 62 0 23 0 0 0 chr15 24096073 24096096 -77284425 + AT_rich Low_complexity Low_complexity 1 23 0 400 278 129 72 chr15 24101878 24102162 -77278359 - L2 LINE L2 0 3313 3047 2080 102 0 0 chr15 24102162 24102428 -77278093 + AluSx SINE Alu 33 298 -14 400 278 129 72 chr15 24102428 24102659 -77277862 - L2 LINE L2 -266 3047 2776 7342 223 64 47 chr15 24102662 24103350 -77277171 + L1MB3 LINE L1 2777 3452 -2714 1802 179 3 10 chr15 24103350 24103640 -77276881 + AluJb SINE Alu 1 288 -24 7342 223 64 47 chr15 24103640 24103951 -77276570 + L1MB3 LINE L1 3452 3756 -2410 2214 98 41 0 chr15 24103951 24104246 -77276275 + AluSc SINE Alu 2 308 -1 7342 223 64 47 chr15 24104246 24105871 -77274650 + L1MB3 LINE L1 3756 5441 -725 1134 138 37 0 chr15 24105873 24106061 -77274460 + L1MB3 LINE L1 5618 5812 -359 1038 214 97 35 chr15 24107185 24107475 -77273046 + MER92B LTR ERV1 1 308 -328 862 197 25 25 chr15 24107543 24107746 -77272775 + MER92B LTR ERV1 434 636 0 238 118 0 171 chr15 24108763 24108839 -77271682 - LTR39 LTR ERV1 -720 63 1 912 96 0 7 chr15 24109227 24109362 -77271159 - L1PB1 LINE L1 0 6151 6018 1439 158 22 19 chr15 24110168 24110481 -77270040 - LTR23 LTR ERV1 0 467 122 1650 133 59 11 chr15 24110600 24110871 -77269650 - AluSx SINE Alu -18 294 11 944 199 0 6 chr15 24114148 24114329 -77266192 + L1MB3 LINE L1 5997 6176 -7 210 319 103 36 chr15 24116321 24116489 -77264032 - MIR SINE MIR -58 150 8 2042 30 0 0 chr15 24116688 24116924 -77263597 - L1PA2 LINE L1 -1133 5013 4778 7892 19 2 0 chr15 24116924 24118073 -77262448 + L1PA2 LINE L1 5004 6155 0 308 176 30 5 chr15 24118555 24118636 -77261885 + MLT1H LTR MaLR 41 164 -385 374 311 23 15 chr15 24120152 24120284 -77260237 - L2 LINE L2 -5 3308 3176 1971 225 43 82 chr15 24120287 24120389 -77260132 + L1M4c LINE L1 6 110 -6170 1581 210 92 16 chr15 24120389 24120822 -77259699 - MLT1C LTR MaLR 0 467 2 1971 225 43 82 chr15 24120822 24121164 -77259357 + L1M4c LINE L1 110 464 -5816 362 69 17 0 chr15 24121164 24121222 -77259299 + (CA)n Simple_repeat Simple_repeat 2 60 0 1971 225 43 82 chr15 24121222 24121829 -77258692 + L1M4c LINE L1 464 1124 -5156 1398 151 12 8 chr15 24121829 24122081 -77258440 + L1MB3 LINE L1 5931 6183 0 1971 225 43 82 chr15 24122081 24122265 -77258256 + L1M4c LINE L1 1124 1314 -4966 3462 243 32 1 chr15 24122279 24122639 -77257882 + L1M4c LINE L1 2039 2386 -3996 1979 95 4 0 chr15 24122639 24122891 -77257630 + AluSq SINE Alu 61 313 0 3462 243 32 1 chr15 24122891 24124238 -77256283 + L1M4c LINE L1 2386 3955 -2427 189 0 0 0 chr15 24124379 24124400 -77256121 + (TAAAA)n Simple_repeat Simple_repeat 5 25 0 3073 181 8 2 chr15 24124769 24125305 -77255216 - L1PA16 LINE L1 -11 6155 5617 364 315 242 25 chr15 24125308 24126364 -77254157 - L2 LINE L2 -419 2895 1610 201 267 33 17 chr15 24126464 24126524 -77253997 - L2 LINE L2 -1877 1437 1377 2188 131 0 0 chr15 24126941 24127238 -77253283 - AluSx SINE Alu -15 297 1 193 243 114 0 chr15 24127961 24128031 -77252490 - MER5A DNA MER1_type -84 105 28 195 258 45 61 chr15 24128704 24128770 -77251751 - MIR SINE MIR -180 82 18 261 388 23 9 chr15 24130277 24130496 -77250025 + HERV16 LTR ERVL 1258 1479 -3517 615 332 60 17 chr15 24130630 24131049 -77249472 + HERV16 LTR ERVL 1785 2221 -3543 1262 335 28 19 chr15 24131177 24131791 -77248730 + HERV16 LTR ERVL 2984 3602 -2162 329 315 45 0 chr15 24134608 24134697 -77245824 + MIR3 SINE MIR 111 203 -5 628 190 22 0 chr15 24135195 24135332 -77245189 - L1MA10 LINE L1 0 6334 6195 736 242 41 0 chr15 24135342 24135536 -77244985 - L1M4 LINE L1 -538 5636 5435 2279 151 12 24 chr15 24135536 24135947 -77244574 - L1MB3 LINE L1 -1 6182 5777 269 214 66 88 chr15 24185981 24186163 -77194358 + LTR8A LTR ERV1 497 674 -53 816 251 39 39 chr15 24187201 24187500 -77193021 + MER46C DNA MER2_type 1 299 -39 346 48 0 0 chr15 24187500 24187542 -77192979 + MER39B LTR ERV1 4 45 -608 325 172 0 0 chr15 24187542 24187600 -77192921 + MER57B LTR ERV1 1 58 -376 1875 90 4 0 chr15 24187700 24187934 -77192587 + AluSp SINE Alu 63 297 -16 2178 211 14 53 chr15 24187934 24188415 -77192106 - L1ME1 LINE L1 -312 5854 5397 2392 117 0 0 chr15 24188415 24188723 -77191798 - AluSx SINE Alu -4 308 1 2178 211 14 53 chr15 24188723 24188804 -77191717 - L1ME1 LINE L1 -769 5397 5314 602 255 25 12 chr15 24188816 24189059 -77191462 + L1M4 LINE L1 3090 3335 -2811 1764 268 47 38 chr15 24189074 24189608 -77190913 - MLT1E2 LTR MaLR -68 558 20 447 281 0 0 chr15 24189617 24189738 -77190783 - L1ME1 LINE L1 -1564 4582 4462 2658 221 30 25 chr15 24189739 24191024 -77189497 + L1ME1 LINE L1 4601 5893 -273 279 114 0 0 chr15 24191136 24191180 -77189341 + (CA)n Simple_repeat Simple_repeat 1 44 0 821 85 78 8 chr15 24191180 24191309 -77189212 + L1MA9 LINE L1 5793 5930 -382 303 280 5 0 chr15 24194360 24194562 -77185959 + (CA)n Simple_repeat Simple_repeat 1 203 0 381 305 6 0 chr15 24194580 24194757 -77185764 + (CA)n Simple_repeat Simple_repeat 2 179 0 186 43 0 0 chr15 24195027 24195050 -77185471 + (CAGCT)n Simple_repeat Simple_repeat 2 24 0 802 222 116 81 chr15 24195352 24195722 -77184799 - MLT1D LTR MaLR -122 383 1 413 305 53 0 chr15 24195887 24196038 -77184483 + MIR SINE MIR 69 227 -35 2249 81 28 3 chr15 24197337 24197622 -77182899 + AluSg SINE Alu 1 292 -18 336 191 15 0 chr15 24197933 24198001 -77182520 - L2 LINE L2 -16 3297 3229 4806 59 2 7 chr15 24198051 24198645 -77181876 + LTR10C LTR ERV1 1 591 0 979 232 35 48 chr15 24199214 24199297 -77181224 + L1M4 LINE L1 2676 2759 -3387 1974 141 0 0 chr15 24199297 24199574 -77180947 + AluSx SINE Alu 3 279 -33 396 0 0 0 chr15 24199574 24199618 -77180903 + (CA)n Simple_repeat Simple_repeat 1 44 0 979 232 35 48 chr15 24199618 24199908 -77180613 + L1M4 LINE L1 2757 3045 -3101 * 2493 223 81 59 chr15 24199902 24200952 -77179569 + L1M4 LINE L1 3802 4874 -1272 2335 77 10 13 chr15 24201706 24202028 -77178493 - AluSq SINE Alu 0 321 1 1395 232 72 79 chr15 24202907 24203726 -77176795 + L1MB7 LINE L1 620 5652 -992 416 167 15 83 chr15 24203727 24203859 -77176662 + L1MB5 LINE L1 5955 6077 -107 1460 209 28 33 chr15 24203859 24204252 -77176269 - LTR7 LTR ERV1 0 450 60 360 160 0 27 chr15 24204282 24204357 -77176164 + L1MB4 LINE L1 6096 6168 -12 286 124 11 56 chr15 24204370 24204459 -77176062 + (CATATA)n Simple_repeat Simple_repeat 2 86 0 215 374 9 9 chr15 24205943 24206050 -77174471 - MIR SINE MIR -77 131 25 224 238 48 32 chr15 24206962 24207025 -77173496 - MIR SINE MIR -32 230 167 2230 259 47 29 chr15 24207506 24208369 -77172152 - L1ME3A LINE L1 -199 5971 5089 398 143 11 66 chr15 24209848 24209939 -77170582 - L1ME LINE L1 -705 5459 5374 2900 216 41 33 chr15 24212261 24213086 -77167435 + L1MB7 LINE L1 5851 6682 0 312 120 0 0 chr15 24213215 24213265 -77167256 + (TTATA)n Simple_repeat Simple_repeat 4 53 0 5017 138 65 32 chr15 24213508 24213996 -77166525 + MER4D LTR ERV1 1 532 -371 618 24 0 24 chr15 24213996 24214078 -77166443 + L1PA2 LINE L1 6076 6155 0 5017 138 65 32 chr15 24214078 24214463 -77166058 + MER4D LTR ERV1 532 903 0 3795 141 10 7 chr15 24214588 24215184 -77165337 + LTR8A LTR ERV1 1 598 -129 2216 171 30 2 chr15 24215287 24215713 -77164808 - L1P LINE L1 -2892 3254 2817 992 274 31 26 chr15 24215771 24216223 -77164298 - L1ME LINE L1 -5070 1000 547 532 268 100 52 chr15 24216475 24216934 -77163587 - L1ME LINE L1 -5587 483 3 21 0 0 0 chr15 24216988 24217009 -77163512 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr15 24217478 24217507 -77163014 + AT_rich Low_complexity Low_complexity 1 29 0 1754 169 23 10 chr15 24217620 24217922 -77162599 + AluJb SINE Alu 2 307 -5 570 260 104 89 chr15 24219261 24219764 -77160757 - L2 LINE L2 -22 3291 2758 902 217 82 25 chr15 24220253 24220397 -77160124 + L1MDb LINE L1 9 174 -6235 2524 87 25 33 chr15 24220397 24220764 -77159757 + THE1B LTR MaLR 1 364 0 902 217 82 25 chr15 24220764 24220863 -77159658 + L1MDb LINE L1 174 266 -6143 524 147 0 74 chr15 24221100 24221195 -77159326 + THE1B LTR MaLR 277 364 0 2770 210 74 7 chr15 24221552 24222157 -77158364 + L1MDb LINE L1 569 1214 -5195 185 179 0 54 chr15 24222248 24222304 -77158217 + (TATATG)n Simple_repeat Simple_repeat 4 56 0 212 323 20 40 chr15 24222460 24222559 -77157962 - L2 LINE L2 -157 3115 3019 189 258 32 65 chr15 24223333 24223426 -77157095 + MIR SINE MIR 42 131 -77 328 171 48 4 chr15 24223448 24223530 -77156991 - MLT1A1 LTR MaLR -73 301 227 2739 201 51 48 chr15 24223538 24224247 -77156274 + L1MDb LINE L1 1200 1914 -4492 2320 101 3 0 chr15 24224247 24224544 -77155977 + AluSc SINE Alu 1 298 -11 2739 201 51 48 chr15 24224544 24224672 -77155849 + L1MDb LINE L1 1914 2040 -4366 723 233 84 32 chr15 24224678 24224927 -77155594 + L1MDb LINE L1 2101 2362 -4044 1138 227 97 25 chr15 24224929 24225250 -77155271 + MER2 DNA MER2_type 1 344 -1 3396 271 28 9 chr15 24225252 24226596 -77153925 + L1MDb LINE L1 2363 3787 -2619 5739 93 94 29 chr15 24226603 24227689 -77152832 + MER11A LTR ERVK 1 1261 -5 598 193 29 71 chr15 24228085 24228302 -77152219 - BSR/Beta Satellite Satellite -8 207 1 595 239 8 38 chr15 24228321 24228729 -77151792 - BSR/Beta Satellite Satellite -4 395 1 401 80 0 0 chr15 24228730 24228780 -77151741 + THE1B LTR MaLR 315 364 0 2964 66 8 0 chr15 24228780 24229158 -77151363 + THE1B-int LTR MaLR 1 381 -1199 8161 86 15 85 chr15 24230154 24230405 -77150116 + THE1B-int LTR MaLR 367 634 -946 2314 97 0 0 chr15 24230405 24230704 -77149817 + AluY SINE Alu 1 299 -12 8161 86 15 85 chr15 24230704 24231750 -77148771 + THE1B-int LTR MaLR 634 1574 -6 2336 138 36 20 chr15 24231755 24232111 -77148410 + THE1B LTR MaLR 1 362 -2 1357 213 94 3 chr15 24232360 24232680 -77147841 + L1MDb LINE L1 3805 4153 -2253 542 222 194 0 chr15 24232681 24232825 -77147696 + MLT1D LTR MaLR 334 505 0 518 231 0 0 chr15 24232825 24232932 -77147589 + MLT1D LTR MaLR 75 181 -324 790 342 75 37 chr15 24233099 24233519 -77147002 + ERVL LTR ERVL 4516 4979 -785 4208 109 45 5 chr15 24233519 24234098 -77146423 + LTR43 LTR ERV1 1 602 0 790 342 75 37 chr15 24234098 24234435 -77146086 + ERVL LTR ERVL 4979 5302 -462 316 263 91 10 chr15 24234822 24234921 -77145600 + LTR33 LTR ERVL 102 208 -313 245 276 60 26 chr15 24235127 24235243 -77145278 + L1ME LINE L1 5690 5809 -312 241 128 0 0 chr15 24236979 24237026 -77143495 - Alu SINE Alu -1 299 253 2475 83 0 0 chr15 24238374 24238675 -77141846 + AluSx SINE Alu 1 301 -11 1662 123 8 11 chr15 24239541 24239809 -77140712 + L1MA4 LINE L1 6018 6284 -16 327 272 158 38 chr15 24240085 24240269 -77140252 + HAL1b LINE L1 311 516 -832 1995 148 51 21 chr15 24240269 24240642 -77139879 - MSTB1 LTR MaLR -48 384 1 1296 274 60 49 chr15 24240795 24241791 -77138730 + L1MDb LINE L1 3162 4168 -2238 283 258 0 86 chr15 24241900 24242028 -77138493 + L1MDb LINE L1 4212 4328 -2078 2286 204 58 49 chr15 24242034 24242588 -77137933 - MER68 LTR ERV1 0 562 4 2475 279 81 32 chr15 24242620 24244229 -77136292 + L1MDb LINE L1 4556 5492 -914 2254 110 7 3 chr15 24244229 24244538 -77135983 + AluSg SINE Alu 1 310 0 2475 279 81 32 chr15 24244538 24244707 -77135814 + L1MDb LINE L1 5492 5651 -755 354 88 53 0 chr15 24244712 24244769 -77135752 - MSTB1 LTR MaLR -2 430 371 1243 166 45 14 chr15 24244769 24244992 -77135529 + AluJb SINE Alu 82 311 -1 2030 142 49 30 chr15 24244993 24245359 -77135162 - MSTB1 LTR MaLR -59 373 1 4876 229 87 50 chr15 24245372 24246894 -77133627 + L1MC4a LINE L1 6489 8067 -1 432 232 20 10 chr15 24247018 24247117 -77133404 - L1MEd LINE L1 -5366 753 654 9002 183 34 13 chr15 24247324 24247354 -77133167 + L1PA15 LINE L1 3653 3681 -2484 561 68 0 0 chr15 24247354 24247428 -77133093 + (GAAA)n Simple_repeat Simple_repeat 3 76 0 9002 183 34 13 chr15 24247428 24249848 -77130673 + L1PA15 LINE L1 3681 6165 0 523 343 53 20 chr15 24250686 24250931 -77129590 - MIR SINE MIR 0 262 10 4491 137 3 13 chr15 24252493 24253181 -77127340 + L1MC1 LINE L1 5636 6316 -17 522 211 0 0 chr15 24253192 24253287 -77127234 + L1M4b LINE L1 1042 1136 -5723 * 877 236 31 49 chr15 24253273 24253631 -77126890 + L1M4b LINE L1 2869 3219 -3738 1674 255 63 74 chr15 24253694 24254751 -77125770 + L1M4c LINE L1 766 1811 -4573 210 37 0 0 chr15 24254751 24254778 -77125743 + (CA)n Simple_repeat Simple_repeat 2 28 0 930 176 7 0 chr15 24254781 24254934 -77125587 - Tigger2 DNA MER2_type -4 2714 2561 1331 168 4 9 chr15 24254936 24255162 -77125359 - AluJb SINE Alu -16 296 72 738 99 0 0 chr15 24255163 24255274 -77125247 - Tigger2 DNA MER2_type -147 2571 2461 3397 149 53 0 chr15 24255328 24255891 -77124630 - Tigger2 DNA MER2_type -1961 757 165 297 68 0 0 chr15 24255911 24255955 -77124566 + (TG)n Simple_repeat Simple_repeat 2 45 0 5666 123 21 13 chr15 24256035 24257437 -77123084 - L1PA13 LINE L1 -4 6159 4795 1113 133 12 6 chr15 24257438 24257611 -77122910 - Tigger2 DNA MER2_type -2544 174 1 381 304 60 36 chr15 24257615 24258103 -77122418 + L1M4c LINE L1 1990 2437 -3947 2403 232 29 9 chr15 24258115 24258780 -77121741 + L1M4c LINE L1 2524 3201 -3181 439 279 44 33 chr15 24259552 24259805 -77120716 - L1MA10 LINE L1 0 6321 5915 1651 138 57 40 chr15 24259831 24260129 -77120392 - AluSx SINE Alu -5 307 5 659 89 50 0 chr15 24260227 24260328 -77120193 + AluSp SINE Alu 2 107 -206 3794 142 30 2 chr15 24260502 24260542 -77119979 + MER39B LTR ERV1 6 43 -610 3152 111 9 2 chr15 24260542 24260973 -77119548 + MER57B LTR ERV1 1 434 0 3794 142 30 2 chr15 24260973 24261559 -77118962 + MER39B LTR ERV1 43 650 -3 528 295 18 26 chr15 24262514 24262741 -77117780 + L1MD2 LINE L1 5487 5711 -455 2022 133 13 3 chr15 24262752 24263060 -77117461 - AluJb SINE Alu -1 311 1 908 266 117 5 chr15 24263064 24263389 -77117132 + L1MD2 LINE L1 5819 6166 0 218 292 14 0 chr15 24263554 24263626 -77116895 + (CATAT)n Simple_repeat Simple_repeat 3 75 0 2120 127 0 10 chr15 24263675 24263974 -77116547 + AluSx SINE Alu 1 296 -16 1965 150 6 13 chr15 24266961 24267274 -77113247 - AluSx SINE Alu 0 312 2 2530 97 26 3 chr15 24268054 24268406 -77112115 - L1PB1 LINE L1 0 6151 5792 420 20 0 0 chr15 24268406 24268455 -77112066 + (CA)n Simple_repeat Simple_repeat 1 49 0 406 143 0 39 chr15 24269989 24270066 -77110455 + AluJ/FLAM SINE Alu 18 91 -211 2290 99 3 0 chr15 24270361 24270655 -77109866 + AluSp SINE Alu 1 295 -18 186 250 73 0 chr15 24270696 24270764 -77109757 + MIR SINE MIR 67 139 -69 2226 52 0 0 chr15 24272236 24272505 -77108016 + L1PA5 LINE L1 5883 6151 -3 357 43 0 0 chr15 24274887 24274934 -77105587 + (TCTA)n Simple_repeat Simple_repeat 2 48 0 2051 119 0 11 chr15 24274936 24275221 -77105300 + AluSx SINE Alu 20 301 -11 7346 44 6 0 chr15 24275221 24276244 -77104277 + L1PA7 LINE L1 5114 6141 -13 186 71 0 0 chr15 24276248 24276276 -77104245 + (TAAAA)n Simple_repeat Simple_repeat 3 30 0 38 39 0 0 chr15 24276276 24276328 -77104193 + AT_rich Low_complexity Low_complexity 1 52 0 225 98 59 20 chr15 24276397 24276448 -77104073 + (TAGA)n Simple_repeat Simple_repeat 1 53 0 393 241 0 0 chr15 24276835 24276918 -77103603 + L1MEc LINE L1 1943 2025 -4371 3955 248 83 22 chr15 24276921 24278629 -77101892 + L1MEc LINE L1 2060 3823 -2392 328 172 0 17 chr15 24278935 24278993 -77101528 + MLT1I LTR MaLR 346 402 -7 194 274 27 14 chr15 24279006 24279079 -77101442 + MER5A DNA MER1_type 82 155 -34 2201 109 0 3 chr15 24280249 24280575 -77099946 - AluSx SINE Alu 0 325 1 248 250 66 0 chr15 24280580 24280656 -77099865 - L1M LINE L1 -772 5394 5314 584 255 26 13 chr15 24280668 24280899 -77099622 + L1M4 LINE L1 3090 3323 -2823 2359 71 20 3 chr15 24281442 24281738 -77098783 + AluY SINE Alu 3 303 -8 708 204 70 50 chr15 24283510 24283711 -77096810 - ORSL DNA AcHobo -41 234 30 22 0 0 0 chr15 24284632 24284654 -77095867 + AT_rich Low_complexity Low_complexity 1 22 0 5889 150 17 21 chr15 24286560 24287554 -77092967 - L1PB3 LINE L1 -2 6152 5155 558 0 0 0 chr15 24287554 24287616 -77092905 + (TTTTA)n Simple_repeat Simple_repeat 2 63 0 2106 106 0 14 chr15 24287619 24287903 -77092618 - AluSx SINE Alu -32 280 1 5889 150 17 21 chr15 24287903 24288941 -77091580 - L1PB3 LINE L1 -1001 5153 4125 2061 132 0 4 chr15 24289218 24289498 -77091023 + AluSx SINE Alu 1 279 -33 6729 232 57 23 chr15 24290119 24292125 -77088396 - L1MEc LINE L1 -1092 5123 3050 624 248 33 26 chr15 24292149 24292302 -77088219 + MER58A DNA MER1_type 71 224 0 239 180 0 0 chr15 24292312 24292362 -77088159 - L1MEc LINE L1 -3170 3045 2996 1593 182 29 66 chr15 24292362 24292742 -77087779 + MLT1A2 LTR MaLR 1 366 -8 1958 232 80 5 chr15 24292750 24293388 -77087133 - L1MEc LINE L1 -3215 3000 2356 2160 108 10 3 chr15 24293424 24293719 -77086802 - AluSq SINE Alu -16 297 1 339 219 0 0 chr15 24293764 24293828 -77086693 + Tigger5 DNA MER2_type 1 64 -2259 1491 128 21 4 chr15 24293847 24294081 -77086440 + Tigger5 DNA MER2_type 2085 2322 -1 5596 250 58 73 chr15 24294090 24294434 -77086087 - L1MEc LINE L1 -4070 2326 1978 1896 132 0 51 chr15 24294434 24294745 -77085776 - AluY SINE Alu -15 296 2 5596 250 58 73 chr15 24294745 24295010 -77085511 - L1MEc LINE L1 -4418 1978 1710 2395 73 0 13 chr15 24295010 24295311 -77085210 - AluY SINE Alu -14 297 1 5596 250 58 73 chr15 24295311 24297025 -77083496 - L1MEc LINE L1 -4686 1710 38 669 237 63 5 chr15 24298875 24299065 -77081456 - L1MA4 LINE L1 -14 6286 6086 1601 59 0 0 chr15 24299437 24299646 -77080875 - AluSg/x SINE Alu 0 306 98 2189 125 0 0 chr15 24300580 24300875 -77079646 - AluSg SINE Alu -15 295 1 229 279 73 50 chr15 24301734 24301913 -77078608 - MIR SINE MIR -22 240 58 219 205 0 164 chr15 24302256 24302322 -77078199 + MIR SINE MIR 30 71 -137 2322 67 3 33 chr15 24302322 24302622 -77077899 + AluY SINE Alu 1 291 -20 219 205 0 164 chr15 24302622 24302678 -77077843 + MIR SINE MIR 71 135 -73 2051 161 29 5 chr15 24303190 24303569 -77076952 + MLT1B LTR MaLR 3 390 0 1493 197 100 3 chr15 24306130 24306605 -77073916 + L1MC4 LINE L1 5498 5782 -384 920 229 103 10 chr15 24306410 24306712 -77073809 + L1MB7 LINE L1 5846 6175 -9 * 2233 105 3 0 chr15 24307085 24307379 -77073142 - AluSx SINE Alu -17 295 1 1902 163 0 3 chr15 24307820 24308120 -77072401 + AluSx SINE Alu 1 299 -13 389 314 70 13 chr15 24308171 24308400 -77072121 - MIR SINE MIR 0 262 21 226 292 45 0 chr15 24308387 24308476 -77072045 + MIR3 SINE MIR 94 186 -22 * 2044 102 74 34 chr15 24309057 24309381 -77071140 + MER1B DNA MER1_type 1 337 0 3634 200 56 122 chr15 24309897 24310373 -77070148 + L1M2 LINE L1 2296 2802 -3344 1743 184 14 3 chr15 24310373 24310656 -77069865 - AluJo SINE Alu -20 292 7 3634 200 56 122 chr15 24310656 24310786 -77069735 + L1M2 LINE L1 2802 2939 -3207 2306 114 0 0 chr15 24310786 24311083 -77069438 - AluSg SINE Alu -13 297 1 3634 200 56 122 chr15 24311083 24311973 -77068548 + L1M2 LINE L1 2939 3695 -2451 861 156 4 24 chr15 24311973 24312218 -77068303 + GA-rich Low_complexity Low_complexity 1 240 0 292 141 13 103 chr15 24312218 24312296 -77068225 + L1P LINE L1 3673 3743 -2403 * 6443 20 0 0 chr15 24312294 24313031 -77067490 - L1PA3 LINE L1 -1137 5009 4273 7918 23 0 0 chr15 24313034 24314181 -77066340 + L1PA3 LINE L1 5005 6151 -4 8773 167 17 11 chr15 24314183 24316202 -77064319 + L1M2 LINE L1 3736 5764 -548 814 144 92 0 chr15 24316373 24316547 -77063974 - L1MEc LINE L1 -4204 2192 2003 415 226 168 15 chr15 24316645 24316851 -77063670 - L1MEc LINE L1 -4421 1975 1744 826 273 93 22 chr15 24317474 24317925 -77062596 - LTR33 LTR ERVL -2 519 37 414 285 111 12 chr15 24318456 24318628 -77061893 - MER5A DNA MER1_type 0 189 1 4176 209 66 13 chr15 24318860 24319998 -77060523 + L1MB4 LINE L1 3964 5040 -1140 1896 172 14 0 chr15 24319998 24320294 -77060227 + AluJb SINE Alu 1 300 -12 4176 209 66 13 chr15 24320294 24321257 -77059264 + L1MB4 LINE L1 5040 6179 -1 1977 151 3 20 chr15 24321272 24321576 -77058945 + AluJo SINE Alu 1 299 -13 2028 89 7 15 chr15 24321589 24321858 -77058663 + AluSx SINE Alu 39 305 -7 2108 117 11 0 chr15 24322558 24322865 -77057656 - AluSp SINE Alu 0 310 1 849 163 0 33 chr15 24322872 24323025 -77057496 - FAM SINE Alu 0 49 1 339 222 23 34 chr15 24325291 24325467 -77055054 + (TATATG)n Simple_repeat Simple_repeat 6 179 0 304 211 56 14 chr15 24325475 24325546 -77054975 + L1MCa LINE L1 1995 2068 -4358 187 221 13 26 chr15 24325565 24325642 -77054879 + (TATG)n Simple_repeat Simple_repeat 4 79 0 2356 109 27 29 chr15 24326014 24326390 -77054131 - THE1C LTR MaLR 0 375 1 180 217 150 0 chr15 24328946 24329006 -77051515 - L2 LINE L2 -36 3236 3168 900 181 19 0 chr15 24330699 24330854 -77049667 + FRAM SINE Alu 1 151 -25 1520 264 59 22 chr15 24331838 24332379 -77048142 + L1M4 LINE L1 1 561 -5981 948 238 88 11 chr15 24332381 24332642 -77047879 + L1M4 LINE L1 587 867 -5675 678 165 0 0 chr15 24332744 24332853 -77047668 + FRAM SINE Alu 63 171 -5 381 232 130 72 chr15 24332854 24332992 -77047529 + L1MC/D LINE L1 4986 5131 -1015 2130 130 3 7 chr15 24332995 24333294 -77047227 + AluSx SINE Alu 1 298 -14 243 100 25 0 chr15 24333294 24333334 -77047187 + Alu SINE Alu 1 41 -262 815 195 31 22 chr15 24333344 24333619 -77046902 + L1MC/D LINE L1 5188 5464 -743 246 47 0 70 chr15 24333920 24333963 -77046558 + LTR10C LTR ERV1 112 151 -440 433 240 79 104 chr15 24334715 24335069 -77045452 + MER68 LTR ERV1 68 412 -150 184 252 15 114 chr15 24335730 24335861 -77044660 - MIR SINE MIR -80 182 65 1518 198 106 25 chr15 24336748 24337107 -77043414 + MLT1B LTR MaLR 3 390 0 303 269 10 10 chr15 24337700 24337804 -77042717 - MER69 DNA AcHobo -1 2525 2422 1707 166 3 14 chr15 24337856 24338145 -77042376 + AluJo SINE Alu 3 288 -24 29 0 0 0 chr15 24338150 24338179 -77042342 + AT_rich Low_complexity Low_complexity 1 29 0 385 273 128 14 chr15 24340190 24340467 -77040054 + MER39 LTR ERV1 397 538 -4 228 188 24 35 chr15 24340564 24340649 -77039872 + GA-rich Low_complexity Low_complexity 3 86 0 270 301 29 19 chr15 24342867 24342970 -77037551 + L1ME3A LINE L1 320 423 -5702 428 270 51 15 chr15 24343255 24343451 -77037070 + L1M4 LINE L1 844 1046 -5080 269 258 11 65 chr15 24345158 24345344 -77035177 + (CA)n Simple_repeat Simple_repeat 1 176 0 182 269 167 0 chr15 24345366 24345444 -77035077 - L2 LINE L2 -3 3310 3220 269 286 92 0 chr15 24347079 24347177 -77033344 + L2 LINE L2 3202 3308 -5 2289 116 0 0 chr15 24350037 24350338 -77030183 - AluSx SINE Alu -2 310 10 852 140 129 0 chr15 24350834 24351005 -77029516 + MER3 DNA MER1_type 1 193 -16 2865 117 144 14 chr15 24352138 24352700 -77027821 + LTR24C LTR ERV1 1 635 0 1008 106 35 0 chr15 24352961 24353131 -77027390 - MER20 DNA MER1_type 0 219 44 2403 82 3 31 chr15 24353866 24354185 -77026336 + AluSg SINE Alu 1 310 0 1391 180 73 38 chr15 24355377 24355666 -77024855 + AluJo SINE Alu 1 299 -13 1761 175 3 7 chr15 24355856 24356148 -77024373 + AluJb SINE Alu 1 291 -21 705 284 25 80 chr15 24357200 24357689 -77022832 - L1ME4a LINE L1 -47 6074 5613 351 243 69 28 chr15 24358966 24359110 -77021411 - MIR SINE MIR 0 262 113 258 165 46 9 chr15 24359358 24359467 -77021054 + CT-rich Low_complexity Low_complexity 2 114 0 263 250 0 0 chr15 24360044 24360104 -77020417 + L1ME3A LINE L1 650 709 -5833 7595 215 36 37 chr15 24360158 24360936 -77019585 + L1ME3A LINE L1 2626 3403 -3241 1938 162 7 76 chr15 24360936 24361116 -77019405 + MLT1B LTR MaLR 1 192 -198 2332 112 3 0 chr15 24361116 24361421 -77019100 + AluSg SINE Alu 1 306 -4 1938 162 7 76 chr15 24361421 24361659 -77018862 + MLT1B LTR MaLR 192 390 0 7595 215 36 37 chr15 24361659 24363060 -77017461 + L1ME3A LINE L1 3403 4815 -1829 573 232 58 0 chr15 24363060 24363215 -77017306 + L1ME3A LINE L1 6277 6440 -228 1996 132 0 44 chr15 24363706 24364044 -77016477 + AluSx SINE Alu 1 325 0 1277 234 40 66 chr15 24365934 24366493 -77014028 - L1MEc LINE L1 -3547 2668 2154 1993 73 4 0 chr15 24566493 24566738 -76813783 - AluSc SINE Alu -63 246 1 32 26 0 0 chr15 24566748 24566787 -76813734 + AT_rich Low_complexity Low_complexity 1 39 0 21 0 0 0 chr15 24566947 24566968 -76813553 + AT_rich Low_complexity Low_complexity 1 21 0 633 214 30 40 chr15 24566969 24567170 -76813351 + L1MC5 LINE L1 6977 7175 -786 405 299 47 16 chr15 24567180 24567307 -76813214 + MER5B DNA MER1_type 48 178 0 279 304 54 20 chr15 24567398 24567546 -76812975 + L2 LINE L2 2942 3094 -178 500 271 47 10 chr15 24567637 24567829 -76812692 - L1ME1 LINE L1 -114 5986 5788 2416 86 7 0 chr15 24567969 24568270 -76812251 + AluSp SINE Alu 1 303 -10 2475 157 26 28 chr15 24569788 24570214 -76810307 + MSTB LTR MaLR 1 425 -1 2247 154 24 0 chr15 24570317 24570700 -76809821 - L1MB3 LINE L1 0 6183 5792 207 0 0 0 chr15 24572030 24572053 -76808468 + (CA)n Simple_repeat Simple_repeat 1 23 0 180 0 0 0 chr15 24573327 24573347 -76807174 + (CAT)n Simple_repeat Simple_repeat 3 22 0 185 284 172 9 chr15 24576892 24577008 -76803513 + MIR SINE MIR 94 228 -34 925 198 36 5 chr15 24577446 24577638 -76802883 + MER82 DNA MER2_type 7 204 -449 1569 211 111 13 chr15 24577879 24578008 -76802513 + MER82 DNA MER2_type 227 342 -311 189 0 0 0 chr15 24578008 24578029 -76802492 + (CA)n Simple_repeat Simple_repeat 2 22 0 1569 211 111 13 chr15 24578029 24578288 -76802233 + MER82 DNA MER2_type 342 653 0 2205 131 0 3 chr15 24578711 24579016 -76801505 - AluSx SINE Alu -8 304 1 387 315 106 63 chr15 24579390 24579835 -76800686 + L1ME4a LINE L1 5639 6102 -19 401 179 12 0 chr15 24580565 24580649 -76799872 + GA-rich Low_complexity Low_complexity 1 85 0 1314 267 103 20 chr15 24580751 24581299 -76799222 - L1ME1 LINE L1 -298 5806 5165 2382 74 3 3 chr15 24581299 24581597 -76798924 - AluY SINE Alu -13 298 1 1314 267 103 20 chr15 24581597 24581784 -76798737 - L1ME1 LINE L1 -939 5165 4995 783 263 54 81 chr15 24581811 24581882 -76798639 - L1ME1 LINE L1 -3107 2973 2902 2658 146 50 7 chr15 24581882 24582342 -76798179 - L1MB2 LINE L1 -2 6169 5690 783 263 54 81 chr15 24582342 24583015 -76797506 - L1ME1 LINE L1 -3178 2902 2249 2965 185 189 6 chr15 24583017 24583740 -76796781 - L1MC3 LINE L1 -12 7773 6918 260 310 49 28 chr15 24584026 24584168 -76796353 - L1ME1 LINE L1 -5924 146 2 2425 74 0 10 chr15 24584309 24584618 -76795903 - AluY SINE Alu -5 306 1 713 336 109 41 chr15 24585068 24585487 -76795034 - L3 LINE CR1 -861 716 258 663 201 141 5 chr15 24585487 24585671 -76794850 - MER3 DNA MER1_type 0 209 1 713 336 109 41 chr15 24585671 24585736 -76794785 - L3 LINE CR1 -1319 258 199 1118 126 12 18 chr15 24585741 24585908 -76794613 - FRAM SINE Alu -9 167 2 2233 92 0 0 chr15 24587015 24587326 -76793195 + AluSc SINE Alu 1 311 0 250 268 18 36 chr15 24587821 24587933 -76792588 + CT-rich Low_complexity Low_complexity 3 112 0 484 282 49 69 chr15 24588268 24588425 -76792096 - HAL1 LINE L1 -1192 1315 1156 1846 110 110 11 chr15 24588425 24588706 -76791815 - AluSg SINE Alu 0 310 2 484 282 49 69 chr15 24588706 24589097 -76791424 - HAL1 LINE L1 -1351 1156 778 208 319 43 11 chr15 24589097 24589191 -76791330 + MER5B DNA MER1_type 23 119 -59 187 200 29 0 chr15 24589252 24589287 -76791234 - MER5B DNA MER1_type -134 44 9 408 225 7 63 chr15 24590704 24590846 -76789675 - L1MC4a LINE L1 -1973 5835 5702 243 326 7 0 chr15 24591038 24591176 -76789345 - L1P LINE L1 -726 5425 5287 24 0 0 0 chr15 24591528 24591552 -76788969 + AT_rich Low_complexity Low_complexity 1 24 0 2346 99 0 10 chr15 24591559 24591863 -76788658 + AluSq SINE Alu 1 301 -12 2095 71 4 0 chr15 24592281 24592533 -76787988 + AluSx SINE Alu 1 253 -59 3982 199 32 14 chr15 24592533 24593403 -76787118 - L1MA10 LINE L1 -39 6295 5410 21 71 0 0 chr15 24593824 24593866 -76786655 + AT_rich Low_complexity Low_complexity 1 42 0 582 316 28 43 chr15 24593874 24594438 -76786083 - L1M4 LINE L1 -1662 4484 3929 2339 116 3 0 chr15 24594453 24594764 -76785757 - AluSx SINE Alu 0 312 1 260 303 56 40 chr15 24594847 24594896 -76785625 - L1MC4 LINE L1 -99 7943 7896 2391 114 0 9 chr15 24594896 24595211 -76785310 - AluSx SINE Alu 0 312 1 260 303 56 40 chr15 24595211 24595412 -76785109 - L1MC4 LINE L1 -146 7896 7689 307 278 17 35 chr15 24596033 24596148 -76784373 - L1MC4a LINE L1 -391 7417 7305 2450 171 17 11 chr15 24596322 24596795 -76783726 - L1MB3 LINE L1 -233 5950 5475 536 304 84 4 chr15 24596854 24597081 -76783440 - MER119 DNA MER1_type -338 245 1 2277 62 0 117 chr15 24597487 24597839 -76782682 + AluY SINE Alu 1 311 0 635 299 21 0 chr15 24597897 24598091 -76782430 + L1MC5 LINE L1 6635 6832 -1129 678 216 40 109 chr15 24598137 24598466 -76782055 + L1MC5 LINE L1 6820 7125 -836 252 291 36 85 chr15 24598604 24598827 -76781694 + L1MC5 LINE L1 7316 7527 -434 2364 56 0 11 chr15 24598999 24599315 -76781206 - AluY SINE Alu 0 313 1 238 270 90 0 chr15 24600531 24600620 -76779901 - MLT1I LTR MaLR -243 166 70 2139 84 22 0 chr15 24602778 24603051 -76777470 - AluSx SINE Alu -14 298 20 2388 185 29 58 chr15 24603410 24603823 -76776698 + MLT1D LTR MaLR 1 397 -108 1941 170 3 3 chr15 24603823 24604135 -76776386 - AluJo SINE Alu 0 312 1 2388 185 29 58 chr15 24604135 24604241 -76776280 + MLT1D LTR MaLR 397 505 0 227 146 24 0 chr15 24606100 24606141 -76774380 + L2 LINE L2 3225 3266 -6 2060 141 0 0 chr15 24606728 24607025 -76773496 - AluJb SINE Alu -15 297 1 4951 201 36 16 chr15 24607038 24607603 -76772918 - L1MC3 LINE L1 -8 7777 7225 2497 85 3 0 chr15 24607603 24607909 -76772612 + AluY SINE Alu 1 307 -4 4951 201 36 16 chr15 24607909 24608258 -76772263 - L1MC3 LINE L1 -560 7225 6833 1942 174 21 6 chr15 24608258 24608597 -76771924 - MER2 DNA MER2_type 0 344 1 4951 201 36 16 chr15 24608597 24608829 -76771692 - L1MC3 LINE L1 -952 6833 6607 2311 113 7 0 chr15 24608836 24609137 -76771384 - AluSc SINE Alu -6 303 1 1277 133 6 0 chr15 24609137 24609318 -76771203 - AluSg/x SINE Alu -4 308 127 1419 202 0 8 chr15 24609538 24609795 -76770726 + AluJo SINE Alu 36 290 -22 255 335 112 22 chr15 24610039 24610218 -76770303 - MIR SINE MIR -48 214 20 1888 282 143 44 chr15 24610408 24611636 -76768885 + L2 LINE L2 1438 2786 -528 189 258 11 75 chr15 24611807 24611900 -76768621 + L2 LINE L2 3151 3237 -76 256 286 98 0 chr15 24611928 24612040 -76768481 + MER96 DNA MER1_type? 48 170 -5 302 299 9 9 chr15 24612394 24612501 -76768020 + MER112 DNA MER1_type 36 142 -118 314 328 24 16 chr15 24612592 24612717 -76767804 - MIR SINE MIR -62 146 21 290 233 33 22 chr15 24613171 24613261 -76767260 + MER5A DNA MER1_type 19 109 -80 24 32 0 0 chr15 24613779 24613810 -76766711 + AT_rich Low_complexity Low_complexity 1 31 0 3481 180 28 31 chr15 24613810 24614316 -76766205 - L1MB3 LINE L1 -7 6176 5673 2574 57 0 22 chr15 24614316 24614634 -76765887 - AluY SINE Alu 0 311 1 3481 180 28 31 chr15 24614634 24614927 -76765594 - L1MB3 LINE L1 -510 5673 5380 558 308 138 21 chr15 24615332 24615657 -76764864 + MLT1I LTR MaLR 47 409 0 2190 124 0 0 chr15 24616236 24616535 -76763986 - AluSc SINE Alu -2 307 9 2009 177 19 0 chr15 24616560 24616932 -76763589 + MLT1B LTR MaLR 12 390 0 187 239 90 30 chr15 24617001 24617068 -76763453 - L2 LINE L2 -51 3262 3192 1999 147 0 16 chr15 24617118 24617425 -76763096 + AluJb SINE Alu 1 302 -10 1903 164 3 10 chr15 24617435 24617733 -76762788 + AluJo SINE Alu 1 296 -16 255 271 27 59 chr15 24618554 24618682 -76761839 - MIR SINE MIR -37 171 48 635 254 11 16 chr15 24618849 24619034 -76761487 - L1MD2 LINE L1 -14 6739 6556 189 107 0 0 chr15 24619034 24619062 -76761459 + (TATG)n Simple_repeat Simple_repeat 4 31 0 513 243 95 7 chr15 24619064 24619212 -76761309 - L1MD2 LINE L1 -229 6524 6364 * 3445 210 28 38 chr15 24619204 24619638 -76760883 - L1MD2 LINE L1 -598 6155 5718 2335 80 0 0 chr15 24619638 24619937 -76760584 - AluSq SINE Alu -14 299 1 3445 210 28 38 chr15 24619937 24620991 -76759530 - L1MD2 LINE L1 -1035 5718 4674 2866 234 69 4 chr15 24620987 24622047 -76758474 - L1MD2 LINE L1 -3134 3406 2284 * 692 211 256 4 chr15 24622051 24622321 -76758200 - L1MD2 LINE L1 -4292 2248 1911 632 128 8 26 chr15 24622322 24622439 -76758082 - L1MB8 LINE L1 0 6178 6064 2391 78 0 0 chr15 24622580 24622887 -76757634 - AluY SINE Alu -4 307 1 22 35 0 0 chr15 24622893 24622922 -76757599 + AT_rich Low_complexity Low_complexity 1 29 0 3102 163 32 17 chr15 24622923 24623523 -76756998 - L1MB3 LINE L1 -2 6181 5573 229 303 46 0 chr15 24623566 24623675 -76756846 - L1MC5 LINE L1 -516 7445 7332 1048 217 14 0 chr15 24623782 24623994 -76756527 + MLT1B LTR MaLR 1 215 -175 653 213 0 0 chr15 24624138 24624260 -76756261 + FLAM_C SINE Alu 1 122 -11 942 9 0 0 chr15 24624278 24624385 -76756136 + (TTTC)n Simple_repeat Simple_repeat 2 108 0 1990 103 14 0 chr15 24624387 24624677 -76755844 - AluSx SINE Alu -18 294 1 221 271 17 17 chr15 24625468 24625586 -76754935 + (TATAA)n Simple_repeat Simple_repeat 3 120 0 846 140 0 22 chr15 24625592 24625728 -76754793 + FLAM_C SINE Alu 1 133 0 21 0 0 0 chr15 24625957 24625978 -76754543 + AT_rich Low_complexity Low_complexity 1 21 0 607 280 84 108 chr15 24627210 24627839 -76752682 + HAL1b LINE L1 56 532 -816 3560 238 36 4 chr15 24627896 24628721 -76751800 + MER97a DNA MER1_type? 2 853 -41 441 339 24 51 chr15 24629051 24629515 -76751006 + L1MC/D LINE L1 2119 2536 -3679 263 267 74 48 chr15 24629675 24629986 -76750535 + L1MC/D LINE L1 2746 3064 -3151 546 307 76 57 chr15 24630030 24630398 -76750123 + L1MC/D LINE L1 3146 3520 -2695 357 342 26 0 chr15 24630405 24630522 -76749999 + L1MC/D LINE L1 3564 3683 -2532 318 264 88 65 chr15 24630616 24630957 -76749564 + L1MC/D LINE L1 4972 5320 -895 295 183 99 160 chr15 24630969 24631100 -76749421 + L1MC/D LINE L1 5483 5605 -2272 1168 309 82 35 chr15 24631382 24632207 -76748314 - L1M4 LINE L1 -1828 4318 3455 1300 195 123 9 chr15 24632291 24632609 -76747912 - MLT1A1 LTR MaLR -11 354 1 290 240 0 13 chr15 24633112 24633187 -76747334 + MIR SINE MIR 14 87 -175 201 247 76 101 chr15 24634903 24635061 -76745460 + MIR3 SINE MIR 23 176 -32 5823 171 43 1 chr15 24635423 24637361 -76743160 + L1PA16 LINE L1 4130 6157 -9 226 311 59 22 chr15 24637619 24637754 -76742767 - MLT1K LTR MaLR -81 507 368 234 0 0 0 chr15 24639142 24639168 -76741353 + (CCCTG)n Simple_repeat Simple_repeat 3 28 0 289 225 0 101 chr15 24639523 24639612 -76740909 - MIR SINE MIR -70 192 113 228 35 0 0 chr15 24640046 24640075 -76740446 + (TC)n Simple_repeat Simple_repeat 1 29 0 306 73 0 0 chr15 24640110 24640151 -76740370 + (TC)n Simple_repeat Simple_repeat 1 41 0 27 0 0 0 chr15 24641685 24641712 -76738809 + AT_rich Low_complexity Low_complexity 1 27 0 1435 130 138 8 chr15 24641712 24641966 -76738555 - AluSg1 SINE Alu -22 287 1 1851 153 91 18 chr15 24642008 24642348 -76738173 - MLT1A1 LTR MaLR 0 365 1 2446 170 118 26 chr15 24642425 24642924 -76737597 - MLT1F1 LTR MaLR -2 565 21 216 0 0 0 chr15 24642929 24642953 -76737568 + (TA)n Simple_repeat Simple_repeat 2 25 0 2077 113 3 13 chr15 24642955 24643256 -76737265 - AluSx SINE Alu -14 298 1 1124 265 54 62 chr15 24643399 24643468 -76737053 - L1ME3A LINE L1 -219 5951 5883 2166 96 0 0 chr15 24643468 24643759 -76736762 - AluSx SINE Alu -17 295 5 1124 265 54 62 chr15 24643759 24644354 -76736167 - L1ME3A LINE L1 -287 5883 5292 594 281 133 0 chr15 24644415 24644625 -76735896 + MIR SINE MIR 3 240 -22 1678 96 137 4 chr15 24645346 24645616 -76734905 + AluSq SINE Alu 2 307 -6 245 284 128 27 chr15 24649349 24649497 -76731024 - MIR SINE MIR -31 231 69 216 135 0 0 chr15 24653380 24653417 -76727104 + (T)n Simple_repeat Simple_repeat 1 37 0 320 299 51 26 chr15 24653656 24653773 -76726748 + L1ME LINE L1 66 185 -5934 362 337 155 47 chr15 24653815 24654066 -76726455 + L1ME LINE L1 4730 5037 -1092 2228 96 3 3 chr15 24654066 24654368 -76726153 + AluSx SINE Alu 2 303 -9 362 337 155 47 chr15 24654368 24654496 -76726025 + L1ME LINE L1 5037 5150 -979 440 274 125 0 chr15 24654498 24654666 -76725855 + L1ME LINE L1 5182 5370 -759 388 304 43 0 chr15 24654714 24654875 -76725646 + L1ME LINE L1 5448 5615 -538 341 202 30 71 chr15 24654878 24654898 -76725623 - MER112 DNA MER1_type -45 215 196 2103 176 60 56 chr15 24654898 24655416 -76725105 - MLT2B1 LTR ERVL 0 520 1 341 202 30 71 chr15 24655416 24655494 -76725027 - MER112 DNA MER1_type -64 196 121 1375 184 90 15 chr15 24655801 24656067 -76724454 - AluJb SINE Alu -12 290 5 220 298 0 18 chr15 24656319 24656376 -76724145 + L2 LINE L2 3200 3255 -17 1856 151 10 0 chr15 24656404 24656703 -76723818 - AluJb SINE Alu -2 310 9 497 243 53 13 chr15 24657233 24657385 -76723136 - MER103 DNA DNA -3 163 6 186 316 53 0 chr15 24657590 24657647 -76722874 + MIR SINE MIR 91 150 -58 248 314 81 0 chr15 24658620 24658706 -76721815 - MIR3 SINE MIR -45 163 71 944 265 72 46 chr15 24658794 24659167 -76721354 - MLT2C1 LTR ERVL -2 395 13 345 255 235 13 chr15 24659667 24659820 -76720701 + MER5A DNA MER1_type 3 189 0 393 245 151 69 chr15 24659836 24659876 -76720645 - MER5A DNA MER1_type -8 181 146 2199 105 0 0 chr15 24659876 24660180 -76720341 - AluSp SINE Alu -9 304 1 393 245 151 69 chr15 24660180 24660298 -76720223 - MER5A DNA MER1_type -43 146 10 439 250 27 27 chr15 24660345 24660457 -76720064 + MIR SINE MIR 39 150 -112 1620 181 0 3 chr15 24660462 24660754 -76719767 - AluJo SINE Alu -13 299 9 1940 113 3 3 chr15 24660782 24661086 -76719435 + AluSx SINE Alu 1 304 0 5476 194 43 20 chr15 24661105 24661671 -76718850 + L1MB3 LINE L1 3975 4527 -1656 2202 147 31 3 chr15 24661671 24662025 -76718496 - THE1B LTR MaLR 0 364 1 5476 194 43 20 chr15 24662025 24663608 -76716913 + L1MB3 LINE L1 4527 6176 -7 1147 181 76 24 chr15 24663682 24663931 -76716590 + AluJo SINE Alu 50 311 -1 486 285 48 5 chr15 24664597 24664783 -76715738 - L1ME3A LINE L1 -5 6165 5972 578 119 0 0 chr15 24664935 24665019 -76715502 + Alu SINE Alu 218 301 -10 811 292 144 41 chr15 24665248 24665671 -76714850 - L1MEc LINE L1 -2505 3710 3229 2253 74 10 7 chr15 24665671 24665981 -76714540 - AluY SINE Alu 0 311 1 811 292 144 41 chr15 24665981 24666043 -76714478 - L1MEc LINE L1 -2986 3229 3175 6573 83 11 7 chr15 24666066 24667389 -76713132 - L1PA10 LINE L1 0 6168 4850 376 259 36 84 chr15 24668185 24668256 -76712265 - LTR41 LTR ERVL -615 158 85 2339 80 0 10 chr15 24668256 24668559 -76711962 + AluY SINE Alu 1 325 0 186 0 40 0 chr15 24668559 24668584 -76711937 + (TAA)n Simple_repeat Simple_repeat 2 180 0 376 259 36 84 chr15 24668584 24668675 -76711846 - LTR41 LTR ERVL -688 85 1 405 39 0 0 chr15 24668800 24668851 -76711670 + (TG)n Simple_repeat Simple_repeat 2 52 0 623 308 67 27 chr15 24668966 24669310 -76711211 - L1MEc LINE L1 -3617 2598 2283 715 186 122 5 chr15 24669341 24669529 -76710992 - MLT1B LTR MaLR 0 390 181 925 91 8 0 chr15 24669557 24669678 -76710843 - AluSp/q SINE Alu -14 299 178 822 134 474 21 chr15 24669729 24669923 -76710598 - LTR12 LTR ERV1 -507 207 55 244 250 0 0 chr15 24669923 24669975 -76710546 - LTR30 LTR ERV1 -670 52 1 248 149 85 0 chr15 24670171 24670218 -76710303 + L2 LINE L2 3203 3253 -60 1992 189 36 5 chr15 24670265 24670657 -76709864 + MLT2D LTR ERVL 3 406 -8 833 242 63 62 chr15 24671527 24671765 -76708756 - MER77 LTR ERV1 -3 602 454 2586 60 0 16 chr15 24671765 24672080 -76708441 + AluY SINE Alu 1 310 -1 833 242 63 62 chr15 24672080 24672259 -76708262 - MER77 LTR ERV1 -151 454 277 320 263 94 60 chr15 24672283 24672548 -76707973 - MER21B LTR ERV1 -400 205 57 771 196 67 11 chr15 24672801 24672980 -76707541 - MER5A DNA MER1_type 0 189 1 485 227 117 19 chr15 24673775 24673929 -76706592 + MER5A DNA MER1_type 1 169 -20 22 70 0 0 chr15 24674308 24674351 -76706170 + AT_rich Low_complexity Low_complexity 1 43 0 1896 190 0 0 chr15 24674827 24675127 -76705394 + AluJb SINE Alu 1 300 -12 208 247 0 14 chr15 24675136 24675209 -76705312 + A-rich Low_complexity Low_complexity 3 74 0 1547 192 95 24 chr15 24675739 24676109 -76704412 - MSTD LTR MaLR 0 396 1 2427 105 0 0 chr15 24676755 24677060 -76703461 - AluSg SINE Alu -4 306 2 414 0 0 0 chr15 24677188 24677234 -76703287 + (TG)n Simple_repeat Simple_repeat 2 47 0 414 267 109 48 chr15 24677548 24677713 -76702808 - MER5B DNA MER1_type -1 177 3 592 231 105 31 chr15 24678934 24679262 -76701259 + L1MCc LINE L1 1354 1874 -4961 * 765 221 76 42 chr15 24679235 24679268 -76701253 + L1M4 LINE L1 5143 5173 -1768 1770 162 43 16 chr15 24679268 24679385 -76701136 + AluJb SINE Alu 1 113 -199 195 42 0 0 chr15 24679385 24679409 -76701112 + (TAAA)n Simple_repeat Simple_repeat 1 24 0 1770 162 43 16 chr15 24679409 24679594 -76700927 + AluJb SINE Alu 113 311 -1 765 221 76 42 chr15 24679594 24679890 -76700631 + L1M4 LINE L1 5173 5483 -1458 1847 154 104 82 chr15 24680006 24680363 -76700158 - MLT1C LTR MaLR -4 463 92 1909 114 81 0 chr15 24680363 24680635 -76699886 - AluSc SINE Alu -15 294 1 1847 154 104 82 chr15 24680635 24680730 -76699791 - MLT1C LTR MaLR -375 92 1 1178 164 9 27 chr15 24682874 24683099 -76697422 - MLT1A1 LTR MaLR 0 365 145 279 173 0 0 chr15 24683113 24683165 -76697356 + CT-rich Low_complexity Low_complexity 3 54 0 1998 98 0 52 chr15 24683171 24683458 -76697063 - AluSg SINE Alu -38 272 1 896 131 20 13 chr15 24683458 24683611 -76696910 - MLT1A1 LTR MaLR -209 156 3 317 295 228 25 chr15 24683621 24683858 -76696663 + L1ME4a LINE L1 5783 6067 -54 1059 153 5 20 chr15 24685441 24685644 -76694877 - MER96B DNA MER1_type? -165 252 53 990 321 115 38 chr15 24685667 24686134 -76694387 + L1 LINE L1 4048 4593 -1553 1898 152 7 7 chr15 24686134 24686430 -76694091 + AluSx SINE Alu 1 296 -16 990 321 115 38 chr15 24686430 24686695 -76693826 + L1 LINE L1 4593 4836 -1310 2353 81 0 29 chr15 24686722 24687029 -76693492 + AluSc SINE Alu 1 298 -11 351 250 13 0 chr15 24687046 24687122 -76693399 + MER81 DNA DNA 2 78 -36 437 260 169 26 chr15 24687196 24687350 -76693171 + MER5B DNA MER1_type 3 178 0 484 271 72 62 chr15 24687976 24688408 -76692113 + HAL1 LINE L1 1239 1674 -833 2512 84 0 0 chr15 24690245 24690555 -76689966 + AluY SINE Alu 2 311 0 198 279 58 0 chr15 24690583 24690669 -76689852 + L2 LINE L2 2563 2653 -661 2455 164 13 0 chr15 24690749 24691139 -76689382 - MSTD LTR MaLR 0 396 2 360 0 0 0 chr15 24693752 24693792 -76686729 + (TG)n Simple_repeat Simple_repeat 2 41 0 415 163 0 22 chr15 24694605 24694697 -76685824 + CT-rich Low_complexity Low_complexity 3 92 0 195 42 0 0 chr15 24694697 24694721 -76685800 + (TTTC)n Simple_repeat Simple_repeat 1 24 0 22 0 0 0 chr15 24694831 24694853 -76685668 + GC_rich Low_complexity Low_complexity 1 22 0 3335 193 22 3 chr15 24695251 24695899 -76684622 - L1MB5 LINE L1 -1 6173 5514 232 222 0 0 chr15 24696469 24696514 -76684007 + MER53 DNA DNA 10 54 -135 610 152 32 70 chr15 24696516 24696674 -76683847 + L1MB2 LINE L1 6020 6171 0 286 231 0 0 chr15 24696675 24696740 -76683781 - MER53 DNA DNA -33 156 92 193 300 0 0 chr15 24699638 24699696 -76680825 + MIR SINE MIR 98 154 -60 2248 106 0 3 chr15 24699760 24700052 -76680469 - AluSx SINE Alu -21 291 1 3447 171 9 28 chr15 24700428 24701096 -76679425 + L1MB3 LINE L1 5528 6182 -1 1026 167 27 45 chr15 24701745 24701967 -76678554 - MER20 DNA MER1_type -1 218 1 2085 131 7 3 chr15 24704415 24704721 -76675800 + AluSc SINE Alu 1 307 -2 2491 100 0 0 chr15 24704731 24705041 -76675480 + AluSg SINE Alu 1 310 0 363 281 39 31 chr15 24706330 24706458 -76674063 - MIR SINE MIR -85 177 49 334 283 87 3 chr15 24706531 24706722 -76673799 - MIR SINE MIR -3 259 2 298 346 97 35 chr15 24708136 24708619 -76671902 - L1MC/D LINE L1 -1991 5817 5305 1659 136 99 0 chr15 24708624 24708926 -76671595 - L1MA9 LINE L1 -5 6307 5976 2061 139 0 3 chr15 24709179 24709473 -76671048 + AluSx SINE Alu 1 293 -19 273 311 89 60 chr15 24709504 24709926 -76670595 - L1MC/D LINE L1 -1101 5045 4637 2383 108 0 0 chr15 24709926 24710231 -76670290 - AluSx SINE Alu -7 305 1 273 311 89 60 chr15 24710231 24710699 -76669822 - L1MC/D LINE L1 -1509 4637 4129 2733 222 84 69 chr15 24710809 24711644 -76668877 - L1MC5 LINE L1 -112 7849 6991 2641 63 0 0 chr15 24711644 24711947 -76668574 + AluY SINE Alu 1 303 -8 2733 222 84 69 chr15 24711947 24712279 -76668242 - L1MC5 LINE L1 -970 6991 6665 1369 246 71 62 chr15 24712300 24712837 -76667684 + MLT1F LTR MaLR 1 542 0 28 29 0 0 chr15 24713216 24713251 -76667270 + AT_rich Low_complexity Low_complexity 1 35 0 364 271 89 44 chr15 24713393 24713675 -76666846 - L1MC5 LINE L1 -376 5745 5643 242 325 129 50 chr15 24714634 24715575 -76664946 + L2 LINE L2 2130 3168 -104 189 264 143 33 chr15 24715640 24715731 -76664790 + MIR SINE MIR 85 185 -77 821 206 75 33 chr15 24718446 24718660 -76661861 + MER58A DNA MER1_type 1 223 -1 652 174 35 47 chr15 24718752 24718924 -76661597 - MER3 DNA MER1_type -30 179 10 1704 181 0 28 chr15 24721178 24721499 -76659022 + AluJb SINE Alu 1 312 0 2364 70 0 7 chr15 24721546 24721847 -76658674 + AluSp SINE Alu 1 299 -14 4170 192 30 1 chr15 24723935 24724845 -76655676 - L1MA8 LINE L1 -4 6287 5352 1581 198 64 1 chr15 24725644 24726133 -76654388 - MER68 LTR ERV1 0 562 8 238 338 14 0 chr15 24726182 24726253 -76654268 + MIR SINE MIR 50 121 -141 1135 200 9 9 chr15 24727387 24727602 -76652919 + MER20 DNA MER1_type 3 217 -2 2305 96 0 6 chr15 24727618 24727932 -76652589 - AluSq SINE Alu -1 312 1 2135 109 0 13 chr15 24728873 24729175 -76651346 + AluSq SINE Alu 1 298 -15 845 209 0 23 chr15 24731202 24731374 -76649147 + AluJo SINE Alu 1 168 -144 240 152 0 0 chr15 24731376 24731422 -76649099 + Alu SINE Alu 84 129 -4 238 302 174 0 chr15 24733307 24733393 -76647128 - MIR SINE MIR -115 147 47 184 277 126 63 chr15 24733475 24733514 -76647007 + L3 LINE CR1 1298 1333 -244 500 198 27 9 chr15 24733514 24733625 -76646896 - MER81 DNA DNA 0 114 2 184 277 126 63 chr15 24733625 24733744 -76646777 + L3 LINE CR1 1333 1466 -111 212 204 23 0 chr15 24735146 24735190 -76645331 + (TTCA)n Simple_repeat Simple_repeat 2 46 0 321 320 0 0 chr15 24735190 24735268 -76645253 - L2 LINE L2 0 3272 3195 699 294 124 8 chr15 24735744 24736108 -76644413 - MLT1J2 LTR MaLR -7 443 38 319 167 0 0 chr15 24737034 24737088 -76643433 - MIR SINE MIR -131 131 78 1417 254 58 32 chr15 24739086 24739554 -76640967 - L1MB3 LINE L1 -6 6177 5686 322 135 0 0 chr15 24739655 24739707 -76640814 + Alu SINE Alu 239 290 -12 278 224 0 33 chr15 24740972 24741155 -76639366 + (TG)n Simple_repeat Simple_repeat 1 177 0 245 242 8 0 chr15 24741174 24741302 -76639219 + (TG)n Simple_repeat Simple_repeat 1 129 0 297 239 28 0 chr15 24741320 24741429 -76639092 + (TG)n Simple_repeat Simple_repeat 1 112 0 2354 66 0 7 chr15 24742745 24743047 -76637474 + AluY SINE Alu 1 300 -11 2746 9 0 0 chr15 24745672 24746010 -76634511 + L1HS LINE L1 5815 6152 -3 353 257 48 67 chr15 24746010 24746115 -76634406 + L1MDa LINE L1 2382 2517 -4056 181 125 0 50 chr15 24752966 24753006 -76627515 + MER5A DNA MER1_type 84 121 -68 660 255 11 21 chr15 24753362 24753550 -76626971 + MER5A DNA MER1_type 4 189 0 198 0 0 0 chr15 24755092 24755114 -76625407 + (GAGAA)n Simple_repeat Simple_repeat 4 25 0 2170 109 0 7 chr15 24755463 24755766 -76624755 - AluSx SINE Alu -11 301 1 1060 147 11 16 chr15 24755869 24756053 -76624468 - FRAM SINE Alu -1 175 1 343 202 12 36 chr15 24758175 24758259 -76622262 + L1MC/D LINE L1 5680 5761 -2047 232 294 24 8 chr15 24758389 24758515 -76622006 + (CACCC)n Simple_repeat Simple_repeat 3 130 0 279 283 81 30 chr15 24760201 24760300 -76620221 + MER5A DNA MER1_type 84 187 -2 212 214 18 36 chr15 24760364 24760420 -76620101 + L2 LINE L2 1861 1915 -1399 222 236 28 66 chr15 24760754 24760860 -76619661 + L2 LINE L2 2889 2990 -282 948 178 6 0 chr15 24762100 24762274 -76618247 - L1PA12 LINE L1 -4509 3072 2898 383 235 130 9 chr15 24762427 24762542 -76617979 - MIR SINE MIR -17 245 117 238 336 26 18 chr15 24762979 24763092 -76617429 + MIR SINE MIR 109 222 -40 2070 115 0 38 chr15 24764407 24764721 -76615800 + AluSx SINE Alu 1 302 -10 509 227 84 45 chr15 24764795 24764949 -76615572 - MER103 DNA DNA -2 164 5 825 194 0 0 chr15 24765400 24765580 -76614941 + (TG)n Simple_repeat Simple_repeat 1 180 0 180 279 162 0 chr15 24767089 24767157 -76613364 + L2 LINE L2 3184 3262 -10 817 176 80 75 chr15 24771150 24771301 -76609220 + L1MC5 LINE L1 3400 3549 -2597 1851 160 3 7 chr15 24771301 24771607 -76608914 + AluJo SINE Alu 1 305 -7 1922 122 7 53 chr15 24771612 24771916 -76608605 + AluSx SINE Alu 1 290 -22 817 176 80 75 chr15 24771916 24771997 -76608524 + L1MC5 LINE L1 3552 3639 -2507 2127 184 57 27 chr15 24771999 24772195 -76608326 + L1MC5 LINE L1 3770 3959 -2187 2611 62 0 3 chr15 24772195 24772500 -76608021 + AluY SINE Alu 1 304 -7 2127 184 57 27 chr15 24772500 24772781 -76607740 + L1MC5 LINE L1 3959 4261 -1885 3778 158 6 39 chr15 24773884 24774608 -76605913 - L1MD1 LINE L1 -3 6239 5540 1541 86 5 32 chr15 24774943 24775163 -76605358 - AluSg/x SINE Alu -12 300 87 4134 133 329 104 chr15 24775594 24776976 -76603545 - pTR5 LTR ERV1 -1 2437 745 2272 108 10 0 chr15 24776976 24777272 -76603249 + AluSx SINE Alu 10 308 -4 618 224 54 136 chr15 24777597 24777950 -76602571 - L1M4 LINE L1 -1768 4378 4055 2647 62 0 0 chr15 24778565 24778874 -76601647 + AluY SINE Alu 1 309 -2 1761 242 114 23 chr15 24778876 24779447 -76601074 - L1MEc LINE L1 -5731 665 43 701 129 20 0 chr15 24779743 24779868 -76600653 - AluSg/x SINE Alu 0 307 181 1397 183 40 5 chr15 24779968 24780379 -76600142 + L1MC5 LINE L1 5093 5526 -648 484 133 78 0 chr15 24780375 24780465 -76600056 + L1M4 LINE L1 5430 5526 -648 * 3713 173 36 7 chr15 24780465 24781184 -76599337 + L1MB8 LINE L1 5430 6173 -5 1146 175 0 28 chr15 24781238 24781449 -76599072 + MER2 DNA MER2_type 6 210 -135 2246 93 20 7 chr15 24781739 24782041 -76598480 - AluSx SINE Alu -6 306 1 333 266 21 50 chr15 24782981 24783122 -76597399 - MIR SINE MIR -39 169 32 223 119 30 30 chr15 24783764 24783831 -76596690 + (CAGAGA)n Simple_repeat Simple_repeat 2 68 0 2217 84 3 3 chr15 24784091 24784433 -76596088 + AluSp SINE Alu 1 342 0 342 235 67 67 chr15 24784433 24784612 -76595909 + L1MC5 LINE L1 5774 5952 -1856 4034 128 44 39 chr15 24785122 24785446 -76595075 - L1PA16 LINE L1 -5 6161 5840 2494 74 0 0 chr15 24785446 24785745 -76594776 - AluY SINE Alu -12 299 1 4034 128 44 39 chr15 24785745 24786145 -76594376 - L1PA16 LINE L1 -326 5840 5433 828 204 95 36 chr15 24786201 24786505 -76594016 + L1MC5 LINE L1 6640 6961 -1000 246 32 0 0 chr15 24786590 24786621 -76593900 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 2109 87 45 0 chr15 24786622 24786888 -76593633 - AluSg SINE Alu -32 278 1 1095 166 73 106 chr15 24786906 24787274 -76593247 - LTR37A LTR ERV1 -52 374 19 261 0 0 0 chr15 24787274 24787303 -76593218 + (T)n Simple_repeat Simple_repeat 1 29 0 262 333 21 0 chr15 24787375 24787471 -76593050 - MER31-int LTR ERV1 -735 4201 4104 2341 84 0 10 chr15 24787814 24788110 -76592411 - AluSg SINE Alu -15 295 3 1770 154 14 17 chr15 24790237 24790529 -76589992 + AluJb SINE Alu 21 311 -1 1036 220 130 43 chr15 24790667 24791013 -76589508 + MER92A LTR ERV1 37 412 0 2567 40 0 17 chr15 24791789 24792091 -76588430 - AluY SINE Alu -14 297 1 331 213 58 85 chr15 24792542 24792590 -76587931 + L1M4 LINE L1 2787 2835 -3311 2373 78 7 0 chr15 24792590 24792913 -76587608 + AluSx SINE Alu 1 325 0 331 213 58 85 chr15 24792913 24793050 -76587471 + L1M4 LINE L1 2835 2969 -3177 3760 226 70 8 chr15 24793280 24794257 -76586264 + L1PB1 LINE L1 6 1042 -5821 349 161 16 0 chr15 24794265 24794327 -76586194 + L1PB1 LINE L1 1094 1156 -5707 15296 188 15 8 chr15 24794332 24799811 -76580710 + L1PB1 LINE L1 1311 6866 -1 937 266 202 12 chr15 24800991 24801502 -76579019 + L1M4 LINE L1 3709 4316 -1830 2015 84 0 4 chr15 24801502 24801752 -76578769 + AluY SINE Alu 1 249 -62 255 31 0 0 chr15 24801905 24801937 -76578584 + (TG)n Simple_repeat Simple_repeat 1 32 0 825 171 39 54 chr15 24801990 24802173 -76578348 + MLT1A1 LTR MaLR 164 345 -20 1773 175 63 29 chr15 24802173 24802556 -76577965 - MSTD LTR MaLR 0 396 1 825 171 39 54 chr15 24802556 24802577 -76577944 + MLT1A1 LTR MaLR 345 365 0 2299 61 0 7 chr15 24805731 24806009 -76574512 + AluY SINE Alu 1 276 -35 215 91 0 23 chr15 24806009 24806053 -76574468 + (CAAAA)n Simple_repeat Simple_repeat 4 46 0 226 274 0 53 chr15 24806665 24806760 -76573761 - L1ME3A LINE L1 0 6170 6081 1488 259 61 13 chr15 24806891 24807369 -76573152 - L1ME3A LINE L1 -202 5968 5468 774 275 100 20 chr15 24807371 24807720 -76572801 + HAL1 LINE L1 1688 2064 -443 6000 239 67 32 chr15 24807738 24808278 -76572243 - L1ME3A LINE L1 -896 5250 4730 2132 119 3 0 chr15 24808278 24808564 -76571957 - AluSx SINE Alu -20 292 6 6000 239 67 32 chr15 24808564 24808652 -76571869 - L1ME3A LINE L1 -1416 4730 4647 2121 114 0 26 chr15 24808652 24808959 -76571562 - AluSq SINE Alu -14 299 1 6000 239 67 32 chr15 24808959 24810433 -76570088 - L1ME3A LINE L1 -1499 4647 3073 6374 84 10 18 chr15 24810440 24811214 -76569307 - L1PA8 LINE L1 0 6291 5528 2351 92 0 0 chr15 24811214 24811517 -76569004 + AluY SINE Alu 1 303 -8 6374 84 10 18 chr15 24811517 24811694 -76568827 - L1PA8 LINE L1 -763 5528 5351 819 133 63 0 chr15 24811672 24811830 -76568691 - L1MA7 LINE L1 -115 6176 6009 * 222 186 17 51 chr15 24812665 24812724 -76567797 + MIR SINE MIR 74 130 -78 5301 165 22 6 chr15 24812896 24813909 -76566612 - L1MB3 LINE L1 -1 6182 5150 243 176 44 59 chr15 24813998 24814066 -76566455 + MER96B DNA MER1_type? 109 175 0 1965 144 44 18 chr15 24814170 24814511 -76566010 - MLT1A1 LTR MaLR -15 350 1 1339 205 28 37 chr15 24814567 24814925 -76565596 + L1MB8 LINE L1 5825 6178 0 1487 176 89 110 chr15 24815350 24815787 -76564734 - LTR12 LTR ERV1 -234 480 53 233 235 0 0 chr15 24815787 24815838 -76564683 - LTR30 LTR ERV1 -670 52 2 359 303 118 11 chr15 24816188 24816366 -76564155 - MER117 DNA MER1_type 0 197 1 1213 245 109 75 chr15 24816657 24817269 -76563252 + L1ME3A LINE L1 5514 6146 -24 2098 137 0 0 chr15 24817315 24817622 -76562899 + AluSx SINE Alu 3 309 -3 1931 218 70 23 chr15 24818087 24818458 -76562063 + MER74B LTR ERVL 66 471 -151 2261 120 15 29 chr15 24818458 24818800 -76561721 + MER1B DNA MER1_type 1 337 0 1931 218 70 23 chr15 24818800 24818960 -76561561 + MER74B LTR ERVL 471 622 0 5931 213 5 9 chr15 24819561 24820864 -76559657 - L1 LINE L1 -1983 4163 2866 6945 42 1 2 chr15 24820864 24821716 -76558805 - L1P LINE L1 -973 5173 4323 372 255 140 32 chr15 24822235 24822259 -76558262 + L2 LINE L2 3099 3119 -153 2279 122 0 0 chr15 24822259 24822571 -76557950 - AluSx SINE Alu 0 312 1 372 255 140 32 chr15 24822571 24822703 -76557818 + L2 LINE L2 3119 3272 0 3081 54 8 3 chr15 24823241 24823611 -76556910 - L1PA8 LINE L1 -1 6171 5800 3096 206 93 18 chr15 24823629 24824390 -76556131 + MER21B LTR ERV1 20 837 -26 1896 127 22 0 chr15 24826637 24826912 -76553609 + AluJb SINE Alu 6 286 -26 683 260 142 31 chr15 24826928 24827216 -76553305 - MLT1I LTR MaLR -89 320 1 305 252 63 47 chr15 24827217 24827344 -76553177 + HAL1b LINE L1 386 514 -834 381 237 89 35 chr15 24827388 24827557 -76552964 + L1MCc LINE L1 25 202 -6221 564 247 17 23 chr15 24827590 24827764 -76552757 + L1MCc LINE L1 1469 1641 -5300 * 1294 236 73 45 chr15 24827762 24828144 -76552377 + L1M4 LINE L1 3791 4183 -1963 2900 155 37 41 chr15 24828146 24828688 -76551833 + MLT2B3 LTR ERVL 1 540 -14 1291 245 91 10 chr15 24828689 24829182 -76551339 + L1M4 LINE L1 4185 4717 -1429 2281 96 3 0 chr15 24830527 24830820 -76549701 - AluSx SINE Alu -18 294 1 21 36 0 0 chr15 24830944 24830972 -76549549 + AT_rich Low_complexity Low_complexity 1 28 0 231 356 0 29 chr15 24831000 24831104 -76549417 + L3b LINE CR1 1397 1497 -86 205 353 52 0 chr15 24831891 24832027 -76548494 + L2 LINE L2 2917 3059 -213 1755 148 3 25 chr15 24832355 24832638 -76547883 + AluJo SINE Alu 29 305 -7 1358 224 22 102 chr15 24832638 24833128 -76547393 + L1MB8 LINE L1 3482 3932 -2214 1151 215 87 8 chr15 24833137 24833504 -76547017 - L1M4 LINE L1 -816 5330 4935 * 3747 172 38 57 chr15 24833501 24833772 -76546749 + L1MB8 LINE L1 5368 5643 -535 330 109 0 0 chr15 24833772 24833818 -76546703 - MADE1 DNA Mariner 0 80 35 3747 172 38 57 chr15 24833818 24834302 -76546219 + L1MB8 LINE L1 5643 6152 -26 2133 111 3 14 chr15 24834314 24834611 -76545910 + AluY SINE Alu 1 294 -17 2160 104 60 11 chr15 24834611 24834958 -76545563 - MSTA LTR MaLR -64 364 1 236 250 31 0 chr15 24835007 24835071 -76545450 + MER63 DNA MER1_type 996 1061 0 1540 174 141 52 chr15 24835992 24836045 -76544476 + MSTD LTR MaLR 1 48 -348 2387 87 3 3 chr15 24836045 24836357 -76544164 + AluSx SINE Alu 1 312 0 1540 174 141 52 chr15 24836357 24836665 -76543856 + MSTD LTR MaLR 48 394 -2 267 306 20 10 chr15 24836757 24836855 -76543666 + MIR SINE MIR 156 254 -8 215 31 31 0 chr15 24836859 24836891 -76543630 + (CAT)n Simple_repeat Simple_repeat 1 33 0 208 226 38 0 chr15 24837361 24837414 -76543107 + (CATATA)n Simple_repeat Simple_repeat 3 57 0 1431 170 4 61 chr15 24837743 24838020 -76542501 + AluJo SINE Alu 29 289 -23 1575 162 26 26 chr15 24838023 24838332 -76542189 - AluSx SINE Alu -3 309 1 291 225 0 42 chr15 24839570 24839641 -76540880 - L1MB8 LINE L1 -168 6010 5943 635 312 119 29 chr15 24839663 24840353 -76540168 + L1MC4a LINE L1 3341 4092 -2054 21 0 0 0 chr15 24841300 24841321 -76539200 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr15 24841567 24841596 -76538925 + AT_rich Low_complexity Low_complexity 1 29 0 574 271 78 53 chr15 24841598 24841919 -76538602 + L1MC4a LINE L1 5291 5619 -2189 232 213 53 53 chr15 24841971 24842046 -76538475 + L2 LINE L2 3231 3305 -8 350 248 41 92 chr15 24842046 24842076 -76538445 + L1MC4a LINE L1 5675 5705 -2103 2023 127 13 13 chr15 24842076 24842376 -76538145 + AluJb SINE Alu 4 303 -9 2286 79 0 26 chr15 24842376 24842680 -76537841 + AluSq SINE Alu 1 296 -17 350 248 41 92 chr15 24842680 24842866 -76537655 + L1MC4a LINE L1 5703 5881 -1927 411 21 0 0 chr15 24842939 24842987 -76537534 + (CA)n Simple_repeat Simple_repeat 1 48 0 301 326 10 77 chr15 24843149 24843554 -76536967 + L1ME4a LINE L1 4456 4833 -1313 335 256 114 31 chr15 24844301 24844555 -76535966 + L1ME4a LINE L1 5119 5393 -753 613 261 84 28 chr15 24844611 24844860 -76535661 + L1ME4a LINE L1 5381 5643 -478 343 221 111 142 chr15 24844904 24845008 -76535513 + L1ME4a LINE L1 5741 5847 -274 2005 122 49 0 chr15 24845008 24845295 -76535226 + AluSx SINE Alu 1 301 -11 343 221 111 142 chr15 24845295 24845570 -76534951 + L1ME4a LINE L1 5847 6108 -13 2126 183 38 19 chr15 24845672 24846092 -76534429 - MSTA LTR MaLR 0 428 1 329 306 30 22 chr15 24846092 24846226 -76534295 - MIR3 SINE MIR -71 137 3 1524 102 69 5 chr15 24847399 24847615 -76532906 - MER30 DNA MER1_type 0 230 1 1330 72 17 17 chr15 24847649 24847830 -76532691 - MER30 DNA MER1_type -49 181 1 1424 223 113 46 chr15 24848807 24849390 -76531131 - L1MC5 LINE L1 -28 7933 7312 2289 83 17 0 chr15 24849419 24849708 -76530813 - AluSc SINE Alu -15 294 1 863 210 48 35 chr15 24849721 24849950 -76530571 - L1MC5 LINE L1 -722 7239 7008 1119 166 73 106 chr15 24850143 24850511 -76530010 + LTR37A LTR ERV1 19 374 -52 2089 87 45 0 chr15 24850529 24850795 -76529726 + AluSg SINE Alu 1 278 -32 213 65 0 0 chr15 24850796 24850827 -76529694 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 838 204 95 36 chr15 24850911 24851215 -76529306 - L1MC5 LINE L1 -1000 6961 6640 2908 127 23 21 chr15 24851271 24851742 -76528779 + L1PA14 LINE L1 5433 5904 -257 2356 76 3 0 chr15 24852689 24852979 -76527542 - AluY SINE Alu -17 294 4 2238 191 6 0 chr15 24853750 24854111 -76526410 + MLT1A1 LTR MaLR 3 365 0 2596 113 28 35 chr15 24855591 24855958 -76524563 - L1PA15 LINE L1 -14 6151 5786 2221 120 0 7 chr15 24855958 24856267 -76524254 - AluSx SINE Alu -5 307 1 2596 113 28 35 chr15 24856267 24856298 -76524223 - L1PA15 LINE L1 -379 5786 5756 1216 244 13 0 chr15 24856300 24856607 -76523914 + L1P LINE L1 2562 2872 -3274 5913 210 8 11 chr15 24856790 24858092 -76522429 - L1 LINE L1 -1983 4879 3582 7893 37 2 0 chr15 24858092 24859042 -76521479 - L1PA5 LINE L1 -973 5173 4222 7842 38 7 0 chr15 24859042 24860022 -76520499 + L1PA5 LINE L1 5169 6154 0 4831 139 51 38 chr15 24860036 24860506 -76520015 - L1PBa LINE L1 -3267 3595 3133 3362 75 49 5 chr15 24860506 24860890 -76519631 + MLT2A1 LTR ERVL 1 407 -37 221 0 35 0 chr15 24860890 24860919 -76519602 + (TA)n Simple_repeat Simple_repeat 2 31 0 3362 75 49 5 chr15 24860919 24860959 -76519562 + MLT2A1 LTR ERVL 407 444 0 4831 139 51 38 chr15 24860959 24861945 -76518576 - L1PBa LINE L1 -3729 3133 2132 300 172 65 32 chr15 24862051 24862144 -76518377 - L1ME4a LINE L1 -1 6120 6025 231 36 0 0 chr15 24862175 24862203 -76518318 + (GAAAA)n Simple_repeat Simple_repeat 3 30 0 3976 66 15 11 chr15 24862203 24862733 -76517788 - LTR6B LTR ERV1 -26 532 1 4150 167 79 4 chr15 24862733 24863662 -76516859 - L1PBa LINE L1 -4728 2135 990 * 6034 147 11 11 chr15 24863657 24864932 -76515589 + L1PB1 LINE L1 4511 5793 -358 489 17 0 0 chr15 24864932 24864990 -76515531 + (TA)n Simple_repeat Simple_repeat 2 59 0 6034 147 11 11 chr15 24864990 24865349 -76515172 + L1PB1 LINE L1 5793 6150 -1 2392 88 0 0 chr15 24866530 24866824 -76513697 - AluSg SINE Alu -15 295 2 240 241 0 0 chr15 24867167 24867225 -76513296 + L1MB4 LINE L1 5688 5745 -2063 3994 90 43 2 chr15 24867327 24867859 -76512662 + MER41A LTR ERV1 1 554 0 4387 127 97 35 chr15 24869316 24870637 -76509884 - pTR5 LTR ERV1 0 2438 743 1947 144 6 41 chr15 24873318 24873376 -76507145 + L1MB4 LINE L1 5852 5911 -269 2257 91 37 0 chr15 24873376 24873674 -76506847 + AluSg SINE Alu 2 310 0 1947 144 6 41 chr15 24873674 24873956 -76506565 + L1MB4 LINE L1 5911 6180 0 26 0 0 0 chr15 24874285 24874311 -76506210 + AT_rich Low_complexity Low_complexity 1 26 0 987 315 120 42 chr15 24874699 24875667 -76504854 + L2 LINE L2 1705 2747 -567 900 333 53 5 chr15 24875885 24876350 -76504171 - L2 LINE L2 -189 3083 2590 367 279 83 59 chr15 24876582 24876786 -76503735 + L2 LINE L2 2287 2495 -819 2251 107 3 3 chr15 24877205 24877515 -76503006 - AluSx SINE Alu -2 310 1 1707 122 52 38 chr15 24877822 24877989 -76502532 - AluJo SINE Alu -21 291 117 234 0 0 0 chr15 24877989 24878015 -76502506 + (TTTG)n Simple_repeat Simple_repeat 2 27 0 1707 122 52 38 chr15 24878015 24878134 -76502387 - AluJo SINE Alu -195 117 1 3220 233 40 55 chr15 24880765 24881008 -76499513 + L1MB8 LINE L1 2839 3084 -3062 2259 109 0 0 chr15 24881008 24881312 -76499209 + AluSg1 SINE Alu 1 304 -5 3220 233 40 55 chr15 24881312 24881688 -76498833 + L1MB8 LINE L1 3084 3464 -2682 1920 154 3 22 chr15 24881688 24881999 -76498522 + AluJo SINE Alu 1 305 -7 3220 233 40 55 chr15 24881999 24882489 -76498032 + L1MB8 LINE L1 3464 3932 -2214 1151 215 87 8 chr15 24882498 24882865 -76497656 - L1M4 LINE L1 -816 5330 4935 * 3747 172 38 57 chr15 24882862 24883133 -76497388 + L1MB8 LINE L1 5368 5643 -535 330 109 0 0 chr15 24883133 24883179 -76497342 - MADE1 DNA Mariner 0 80 35 3747 172 38 57 chr15 24883179 24883663 -76496858 + L1MB8 LINE L1 5643 6152 -26 2167 116 0 13 chr15 24883675 24883978 -76496543 + AluY SINE Alu 1 299 -12 232 115 77 0 chr15 24883978 24884030 -76496491 - MER44D DNA MER2_type -123 582 527 * 3971 123 15 2 chr15 24884026 24884682 -76495839 + MER72 LTR ERV1 9 722 0 547 134 229 0 chr15 24884682 24884811 -76495710 - MER44D DNA MER2_type -167 438 10 4184 45 16 10 chr15 24885309 24885796 -76494725 - LTR2B LTR ERV1 0 490 1 26 50 0 0 chr15 24887663 24887703 -76492818 + GC_rich Low_complexity Low_complexity 1 40 0 30 27 0 0 chr15 24888763 24888800 -76491721 + AT_rich Low_complexity Low_complexity 1 37 0 325 314 38 0 chr15 24889242 24889347 -76491174 + MIR SINE MIR 35 143 -119 362 274 89 45 chr15 24889607 24889786 -76490735 + MIR SINE MIR 9 195 -67 411 264 139 79 chr15 24890504 24891054 -76489467 - L1ME2 LINE L1 -235 5929 5306 327 262 131 45 chr15 24891200 24891421 -76489100 - L1ME2 LINE L1 -1039 5107 4868 2315 104 0 0 chr15 24891515 24891814 -76488707 - AluSq SINE Alu -14 299 1 304 239 68 118 chr15 24891840 24892179 -76488342 - L1ME2 LINE L1 -1956 4190 3869 260 207 0 17 chr15 24892383 24892441 -76488080 - L1MC4 LINE L1 -2 8040 7984 1477 211 61 8 chr15 24892454 24892814 -76487707 - L1MC4 LINE L1 -399 7643 7265 1460 227 87 48 chr15 24892811 24893003 -76487518 - L1MC4a LINE L1 -830 6978 6795 * 2397 66 13 3 chr15 24893003 24893305 -76487216 - AluY SINE Alu -2 309 5 1460 227 87 48 chr15 24893305 24893637 -76486884 - L1MC4a LINE L1 -1013 6795 6439 237 271 171 11 chr15 24893859 24894128 -76486393 - L1ME2 LINE L1 -2499 3647 3336 4583 152 66 15 chr15 24894152 24894954 -76485567 - MER21A LTR ERV1 -2 929 87 594 241 123 44 chr15 24895101 24895644 -76484877 - L1ME2 LINE L1 -2884 3262 2677 515 257 7 29 chr15 24895655 24895791 -76484730 - FLAM_A SINE Alu 0 133 1 1394 175 8 16 chr15 24895806 24896058 -76484463 - AluJo SINE Alu -24 288 39 378 265 123 24 chr15 24896403 24896614 -76483907 - L1MC5 LINE L1 -29 7932 7701 1253 214 47 126 chr15 24896618 24897188 -76483333 - L1M4 LINE L1 -2213 4431 3907 814 181 0 0 chr15 24897188 24897326 -76483195 - MER67A LTR ERV1 0 543 406 204 40 0 0 chr15 24897365 24897390 -76483131 + (TA)n Simple_repeat Simple_repeat 2 26 0 782 150 0 0 chr15 24897391 24897504 -76483017 - AluJb SINE Alu -199 113 1 1770 147 24 53 chr15 24897506 24897847 -76482674 - MER67A LTR ERV1 -127 416 86 772 256 13 34 chr15 24897874 24898108 -76482413 - L1M4 LINE L1 -5485 1057 829 238 254 34 0 chr15 24898140 24898199 -76482322 - L1M4 LINE L1 -6409 133 73 2344 152 2 25 chr15 24898240 24898642 -76481879 + L1MB3 LINE L1 5791 6183 0 229 82 20 61 chr15 24898650 24898699 -76481822 + L1MB3 LINE L1 6137 6183 0 2389 84 0 10 chr15 24898961 24899271 -76481250 - AluSg SINE Alu -2 308 2 1292 246 32 61 chr15 24899567 24899829 -76480692 + L1MC4a LINE L1 5523 5770 -2038 2215 88 3 0 chr15 24899829 24900159 -76480362 + AluSp SINE Alu 1 331 0 1292 246 32 61 chr15 24900159 24900337 -76480184 + L1MC4a LINE L1 5770 5952 -1856 1723 161 65 6 chr15 24900847 24901170 -76479351 - L1PA16 LINE L1 -5 6161 5820 1869 152 10 7 chr15 24901171 24901468 -76479053 - AluJb SINE Alu -14 298 1 222 171 0 0 chr15 24901541 24901582 -76478939 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 1378 164 72 34 chr15 24901583 24901846 -76478675 - Tigger3(Golem) DNA MER2_type -1 3028 2756 432 199 175 30 chr15 24901867 24902033 -76478488 - L2 LINE L2 -250 3063 2874 258 329 0 0 chr15 24902034 24902110 -76478411 - Tigger3(Golem) DNA MER2_type -2953 76 1 1153 305 74 6 chr15 24902190 24902840 -76477681 - L1 LINE L1 -1033 5113 4415 487 289 61 56 chr15 24902885 24903065 -76477456 - MLT1H1 LTR MaLR 0 555 377 1019 266 61 66 chr15 24903065 24903624 -76476897 - LTR38 LTR ERV1 0 556 1 487 289 61 56 chr15 24903624 24903989 -76476532 - MLT1H1 LTR MaLR -178 377 1 1929 284 77 24 chr15 24903996 24904978 -76475543 - L1 LINE L1 -1782 4364 3331 440 286 132 5 chr15 24905106 24905295 -76475226 - LTR50 LTR ERVL -582 213 1 1892 114 4 0 chr15 24905809 24906072 -76474449 - AluSx SINE Alu -2 310 47 628 280 88 18 chr15 24906282 24906611 -76473910 + L1ME3A LINE L1 5614 5965 -199 231 274 0 53 chr15 24906746 24906841 -76473680 + L1ME3A LINE L1 6081 6170 0 376 331 20 0 chr15 24906921 24907072 -76473449 + L1ME LINE L1 5479 5632 -538 287 283 18 26 chr15 24907157 24907270 -76473251 - MLT1H LTR MaLR -311 238 127 2337 102 0 0 chr15 24907632 24907926 -76472595 - AluSg SINE Alu -15 295 2 1991 170 50 31 chr15 24907951 24908493 -76472028 + MLT2A2 LTR ERVL 1 554 0 719 181 0 0 chr15 24908493 24908609 -76471912 + MER44D DNA MER2_type 489 604 -1 647 289 41 18 chr15 24908624 24908842 -76471679 - MIR SINE MIR -32 230 8 197 77 0 0 chr15 24909010 24909036 -76471485 + L2 LINE L2 3207 3232 -40 2020 210 109 16 chr15 24909117 24909613 -76470908 - MER34 LTR ERV1 0 542 1 533 281 141 19 chr15 24910964 24911234 -76469287 + MLT1K LTR MaLR 282 584 -4 2229 110 7 0 chr15 24911489 24911788 -76468733 + AluSx SINE Alu 1 301 -11 499 140 11 43 chr15 24911864 24911957 -76468564 - MER1B DNA MER1_type 0 339 250 * 1228 133 16 0 chr15 24911954 24912142 -76468379 - MER1B DNA MER1_type -106 191 1 303 306 83 0 chr15 24912377 24912485 -76468036 + HAL1b LINE L1 83 199 -1149 326 299 0 0 chr15 24913140 24913237 -76467284 - L1M4 LINE L1 -1258 4888 4792 1013 227 45 39 chr15 24913237 24913567 -76466954 - MLT1B LTR MaLR 0 390 59 1181 164 82 39 chr15 24913920 24914152 -76466369 + Tigger3(Golem) DNA MER2_type 2786 3027 -2 222 171 0 0 chr15 24914153 24914194 -76466327 + (TATATG)n Simple_repeat Simple_repeat 2 42 0 1935 151 10 6 chr15 24914267 24914578 -76465943 + AluJb SINE Alu 1 312 0 1524 234 75 26 chr15 24914606 24914910 -76465611 + L1ME3 LINE L1 5346 5685 -477 2244 102 0 0 chr15 24914910 24915193 -76465328 + AluSx SINE Alu 6 288 -24 1524 234 75 26 chr15 24915193 24915379 -76465142 + L1ME3 LINE L1 5685 5860 -302 999 271 106 31 chr15 24915446 24915997 -76464524 + L2 LINE L2 2718 3310 -3 241 225 69 106 chr15 24916101 24916261 -76464260 - HAL1 LINE L1 -1814 693 540 521 286 77 46 chr15 24916305 24916630 -76463891 + MLT1I LTR MaLR 68 402 -7 471 333 48 33 chr15 24916704 24917101 -76463420 - HAL1 LINE L1 -2057 450 48 294 179 0 0 chr15 24917598 24917654 -76462867 + CT-rich Low_complexity Low_complexity 3 58 0 264 59 0 0 chr15 24917679 24917713 -76462808 + (TTCC)n Simple_repeat Simple_repeat 2 35 0 2190 123 10 0 chr15 24917713 24918021 -76462500 - AluSq SINE Alu -1 312 2 360 235 0 0 chr15 24918532 24918600 -76461921 - MLT1K LTR MaLR -15 573 506 2389 44 14 30 chr15 24918600 24918897 -76461624 - AluY SINE Alu -19 292 1 2389 196 97 6 chr15 24920791 24921295 -76459226 - MER44D DNA MER2_type 0 605 1 1168 171 96 32 chr15 24921317 24921568 -76458953 + MLT2D LTR ERVL 146 412 -2 488 215 114 7 chr15 24921572 24921721 -76458800 - L2 LINE L2 -697 2617 2453 458 112 2 17 chr15 24922040 24922113 -76458408 - MLT1C LTR MaLR 0 467 406 442 241 0 11 chr15 24922207 24922294 -76458227 + MER58 DNA MER1_type 5 90 -125 385 285 10 57 chr15 24922358 24922551 -76457970 + L1MEc LINE L1 638 821 -5575 267 267 70 64 chr15 24922629 24922801 -76457720 + L1MC5 LINE L1 6876 7048 -913 989 232 89 36 chr15 24922820 24923212 -76457309 + L1MC5 LINE L1 7112 7524 -437 2105 265 85 21 chr15 24923292 24924314 -76456207 + L1M4 LINE L1 2670 3756 -2390 286 250 40 0 chr15 24924567 24924643 -76455878 - MLT1B LTR MaLR 0 530 452 548 212 147 41 chr15 24924891 24925136 -76455385 - MLT1B LTR MaLR -118 272 2 924 218 28 40 chr15 24925157 24925322 -76455199 - L1M4 LINE L1 -1373 4773 4611 2426 75 0 0 chr15 24925322 24925614 -76454907 - AluSc SINE Alu -17 292 1 924 218 28 40 chr15 24925614 24925700 -76454821 - L1M4 LINE L1 -1535 4611 4525 789 283 78 44 chr15 24927297 24927707 -76452814 + MLT1L LTR MaLR 184 607 -8 2229 127 51 25 chr15 24928051 24928406 -76452115 + THE1B LTR MaLR 1 364 0 452 169 0 0 chr15 24929296 24929367 -76451154 - AluJ/FRAM SINE Alu -10 302 232 1842 124 0 11 chr15 24929391 24929657 -76450864 - AluSq SINE Alu -50 263 1 1355 212 49 61 chr15 24930159 24930550 -76449971 + MLT1B LTR MaLR 1 386 -4 1536 116 19 0 chr15 24930784 24930999 -76449522 + AluSg/x SINE Alu 83 301 -11 923 192 72 5 chr15 24931315 24931523 -76448998 + MER34 LTR ERV1 1 222 -320 1096 171 35 0 chr15 24931585 24931784 -76448737 + MER34 LTR ERV1 337 542 0 2125 117 0 32 chr15 24932105 24932413 -76448108 + AluSx SINE Alu 1 298 -14 2027 132 0 17 chr15 24934017 24934313 -76446208 + AluSx SINE Alu 1 291 -21 702 246 116 78 chr15 24934473 24934996 -76445525 + L1M4 LINE L1 3796 4297 -1849 14937 125 46 4 chr15 24934996 24937317 -76443204 + Tigger1 DNA MER2_type 2 2418 0 702 246 116 78 chr15 24937317 24937378 -76443143 + L1M4 LINE L1 4297 4354 -1792 2205 115 3 0 chr15 24937378 24937674 -76442847 + AluSx SINE Alu 1 297 -15 702 246 116 78 chr15 24937674 24938391 -76442130 + L1M4 LINE L1 4354 5214 -932 23 68 0 0 chr15 24938714 24938758 -76441763 + AT_rich Low_complexity Low_complexity 1 44 0 564 226 56 78 chr15 24939020 24939326 -76441195 + L1MC5 LINE L1 7610 7908 -53 875 258 113 19 chr15 24939656 24940178 -76440343 + L2 LINE L2 2744 3313 0 1671 287 123 21 chr15 24940302 24941101 -76439420 - L2 LINE L2 -543 2771 1892 500 117 0 0 chr15 24941668 24941745 -76438776 - AluJ/FRAM SINE Alu -4 308 232 1916 105 8 4 chr15 24941769 24942027 -76438494 - AluSq SINE Alu -50 263 5 1718 158 54 3 chr15 24942031 24942366 -76438155 - L1MB3 LINE L1 -40 6143 5792 933 181 0 18 chr15 24943272 24943438 -76437083 + Tigger1 DNA MER2_type 1 163 -2255 * 1100 167 0 77 chr15 24943419 24943467 -76437054 + Tigger1 DNA MER2_type 2202 2252 -166 2577 62 0 0 chr15 24943467 24943772 -76436749 - AluY SINE Alu -6 305 1 1100 167 0 77 chr15 24943772 24943957 -76436564 + Tigger1 DNA MER2_type 2252 2417 -1 1163 265 77 20 chr15 24944723 24945188 -76435333 + L1MC3 LINE L1 1 839 -5583 9450 166 104 77 chr15 24945206 24946520 -76434001 + L1MC3 LINE L1 877 2155 -6425 2272 101 0 7 chr15 24946520 24946826 -76433695 + AluSg SINE Alu 1 304 -6 9450 166 104 77 chr15 24946826 24946922 -76433599 + L1MC3 LINE L1 2155 2247 -6333 1664 80 9 0 chr15 24946922 24947146 -76433375 + L1PA10 LINE L1 5939 6164 -4 9450 166 104 77 chr15 24947146 24947300 -76433221 + L1MC3 LINE L1 2247 2395 -6185 1480 166 50 0 chr15 24947300 24947583 -76432938 - L1MA8 LINE L1 -4 6287 5991 9450 166 104 77 chr15 24947583 24947636 -76432885 + L1MC3 LINE L1 2395 2445 -6135 2637 161 11 25 chr15 24947636 24948107 -76432414 + MER4C LTR ERV1 1 464 -1 9450 166 104 77 chr15 24948107 24948223 -76432298 + L1MC3 LINE L1 2445 2556 -6024 3570 181 106 16 chr15 24948223 24949014 -76431507 + MER21B LTR ERV1 1 862 -1 9450 166 104 77 chr15 24949014 24949259 -76431262 + L1MC3 LINE L1 2556 2793 -5787 1366 201 73 4 chr15 24949259 24949533 -76430988 - AluJo SINE Alu -19 293 1 9450 166 104 77 chr15 24949533 24952459 -76428062 + L1MC3 LINE L1 2793 5640 -2940 2305 82 0 20 chr15 24952459 24952764 -76427757 + AluY SINE Alu 1 299 -12 9450 166 104 77 chr15 24952764 24954048 -76426473 + L1MC3 LINE L1 5640 6888 -1692 1123 179 159 14 chr15 24954048 24954234 -76426287 - MER44D DNA MER2_type -1882 609 451 2455 70 0 3 chr15 24954234 24954532 -76425989 + AluY SINE Alu 1 297 -14 1123 179 159 14 chr15 24954532 24954641 -76425880 - MER44D DNA MER2_type -2040 451 1 9450 166 104 77 chr15 24954641 24955060 -76425461 + L1MC3 LINE L1 6888 7294 -1286 397 239 9 44 chr15 24955060 24955173 -76425348 + MLT1F1 LTR MaLR 25 133 -434 9450 166 104 77 chr15 24955173 24955310 -76425211 + L1MC3 LINE L1 7294 7426 -1154 2097 104 0 42 chr15 24955310 24955618 -76424903 + AluSc SINE Alu 1 295 -14 9450 166 104 77 chr15 24955618 24956055 -76424466 + L1MC3 LINE L1 7426 8580 0 2339 90 3 0 chr15 24957831 24958132 -76422389 + AluSp SINE Alu 1 302 -11 2338 177 20 22 chr15 24958849 24959307 -76421214 + MLT1C LTR MaLR 1 457 -10 489 241 111 128 chr15 24959807 24960368 -76420153 + MLT1G LTR MaLR 40 590 0 2541 62 0 3 chr15 24961013 24961317 -76419204 + AluY SINE Alu 1 303 -8 1903 168 3 0 chr15 24961467 24961765 -76418756 - AluJb SINE Alu -13 299 1 551 240 120 5 chr15 24962852 24963052 -76417469 - MIR SINE MIR -19 243 21 320 310 26 9 chr15 24963041 24963154 -76417367 + MIR SINE MIR 46 160 -102 * 1110 71 0 0 chr15 24963470 24963610 -76416911 + AluSg/x SINE Alu 173 312 0 201 325 44 26 chr15 24966293 24966407 -76414114 - MIR3 SINE MIR -87 121 6 288 239 11 34 chr15 24966411 24966499 -76414022 + (TTCA)n Simple_repeat Simple_repeat 3 88 0 679 312 98 21 chr15 24967565 24967995 -76412526 - L1MC/D LINE L1 -2069 5739 5277 21 0 0 0 chr15 24968074 24968095 -76412426 + AT_rich Low_complexity Low_complexity 1 21 0 309 258 178 48 chr15 24968154 24968333 -76412188 + L1MC4a LINE L1 5795 5949 -1859 2067 153 43 85 chr15 24968333 24968816 -76411705 + MLT2C2 LTR ERVL 1 463 -1 309 258 178 48 chr15 24968816 24968973 -76411548 + L1MC4a LINE L1 5949 6175 -1633 351 96 0 0 chr15 24970071 24970123 -76410398 + (CA)n Simple_repeat Simple_repeat 2 53 0 566 313 82 0 chr15 24971050 24971258 -76409263 - MIR SINE MIR -20 242 18 1354 205 85 3 chr15 24972318 24972478 -76408043 - AluJo SINE Alu -6 306 160 180 0 0 0 chr15 24972478 24972498 -76408023 + (TTTTA)n Simple_repeat Simple_repeat 2 21 0 1354 205 85 3 chr15 24972498 24972620 -76407901 - AluJo SINE Alu -152 160 1 289 278 22 0 chr15 24973300 24973390 -76407131 - L2 LINE L2 0 3313 3222 1843 104 4 19 chr15 24974803 24975072 -76405449 + AluSx SINE Alu 39 303 -9 204 40 0 0 chr15 24975075 24975100 -76405421 + (TTAA)n Simple_repeat Simple_repeat 2 26 0 464 310 154 16 chr15 24975251 24975622 -76404899 - L1M4 LINE L1 -2579 3567 3146 2169 107 10 0 chr15 24975897 24976187 -76404334 + AluSx SINE Alu 5 297 -15 1693 156 39 67 chr15 24976246 24976604 -76403917 - MER7A DNA MER2_type 0 346 1 260 224 0 141 chr15 24976800 24976871 -76403650 - MIR SINE MIR 0 262 183 1561 148 50 44 chr15 24976871 24977169 -76403352 - AluJo SINE Alu -8 304 5 1814 177 0 3 chr15 24977175 24977469 -76403052 - AluJo SINE Alu -19 293 1 260 224 0 141 chr15 24977469 24977546 -76402975 - MIR SINE MIR -84 178 129 32 26 0 0 chr15 24978373 24978412 -76402109 + AT_rich Low_complexity Low_complexity 1 39 0 240 235 10 49 chr15 24978652 24978668 -76401853 + (TATG)n Simple_repeat Simple_repeat 3 18 -82 198 0 0 0 chr15 24978668 24978690 -76401831 + (TAGG)n Simple_repeat Simple_repeat 1 22 0 240 235 10 49 chr15 24978690 24978775 -76401746 + (TATG)n Simple_repeat Simple_repeat 18 100 0 197 329 24 0 chr15 24978780 24978865 -76401656 - MIR SINE MIR -8 254 168 200 308 11 11 chr15 24978923 24979014 -76401507 - MIR SINE MIR -74 188 98 335 272 68 0 chr15 24979015 24979118 -76401403 - MIR SINE MIR -90 172 63 2580 172 42 22 chr15 24979168 24979673 -76400848 + MLT2B2 LTR ERVL 1 515 0 909 263 211 12 chr15 24980117 24980543 -76399978 + LTR33 LTR ERVL 3 513 -8 335 324 0 0 chr15 24981263 24981368 -76399153 + L1ME2 LINE L1 6038 6142 -22 309 215 15 0 chr15 24981471 24981536 -76398985 + L1MC4 LINE L1 6638 6703 -1339 2613 62 3 0 chr15 24981537 24981846 -76398675 - AluY SINE Alu -1 310 1 710 321 105 24 chr15 24981884 24982778 -76397743 + L1ME3A LINE L1 4401 5367 -779 2478 44 13 32 chr15 24982797 24983113 -76397408 + AluY SINE Alu 1 310 -1 646 310 39 18 chr15 24983241 24983622 -76396899 + L1ME3A LINE L1 5557 5951 -213 28 0 0 0 chr15 24983834 24983862 -76396659 + AT_rich Low_complexity Low_complexity 1 28 0 2113 114 0 23 chr15 24984653 24984952 -76395569 - AluSg SINE Alu -18 292 1 2235 124 3 3 chr15 24987609 24987916 -76392605 - AluSx SINE Alu -5 307 1 189 276 216 17 chr15 24989511 24989692 -76390829 + MIR SINE MIR 19 235 -27 27 0 0 0 chr15 24989962 24989989 -76390532 + AT_rich Low_complexity Low_complexity 1 27 0 3549 123 26 9 chr15 24989989 24990488 -76390033 - L1MC1 LINE L1 0 6333 5821 2073 129 3 0 chr15 24990488 24990775 -76389746 - AluSx SINE Alu -4 308 21 3549 123 26 9 chr15 24990775 24990853 -76389668 - L1MC1 LINE L1 -512 5821 5746 2175 118 0 3 chr15 24991330 24991618 -76388903 - AluSx SINE Alu -25 287 1 1108 221 79 25 chr15 24991664 24991981 -76388540 - L1ME1 LINE L1 -5 6161 5828 4337 238 43 44 chr15 24992226 24993285 -76387236 + L1M4 LINE L1 1 1060 -5586 1984 143 3 20 chr15 24993285 24993586 -76386935 + AluSx SINE Alu 1 296 -16 4337 238 43 44 chr15 24993586 24993841 -76386680 + L1M4 LINE L1 1060 1314 -5332 1827 161 0 30 chr15 24993841 24994145 -76386376 + AluJo SINE Alu 1 295 -17 4337 238 43 44 chr15 24994145 24994845 -76385676 + L1M4 LINE L1 1314 2018 -4628 1458 168 183 40 chr15 24994950 24995350 -76385171 + MSTB2 LTR MaLR 1 457 0 987 206 78 5 chr15 24995350 24995704 -76384817 + L1M4 LINE L1 2588 2970 -3674 390 310 110 0 chr15 24995847 24996002 -76384519 - MER5B DNA MER1_type -4 174 3 315 260 48 19 chr15 24996010 24996114 -76384407 + MIR SINE MIR 13 119 -143 272 26 0 26 chr15 24996274 24996312 -76384209 + (CAT)n Simple_repeat Simple_repeat 3 39 0 396 0 0 0 chr15 24996595 24996639 -76383882 + (CA)n Simple_repeat Simple_repeat 2 45 0 241 320 100 7 chr15 24996918 24997157 -76383364 + L1ME4a LINE L1 904 1172 -4947 255 103 0 0 chr15 24997157 24997196 -76383325 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 241 320 100 7 chr15 24997196 24997225 -76383296 + L1ME4a LINE L1 1172 1197 -4922 2659 148 11 25 chr15 24997352 24997791 -76382730 + Tigger2a DNA MER2_type 1 433 -1 237 340 10 0 chr15 24997959 24998059 -76382462 + L1ME4a LINE L1 4721 4821 -1308 311 303 99 36 chr15 24998118 24998339 -76382182 + L1ME4a LINE L1 4889 5123 -1006 215 30 0 30 chr15 24998401 24998434 -76382087 + (TAAAAA)n Simple_repeat Simple_repeat 2 33 0 275 269 0 25 chr15 24998802 24998921 -76381600 + T-rich Low_complexity Low_complexity 5 120 0 511 254 78 54 chr15 24999044 24999379 -76381142 + L1ME4a LINE L1 5762 6104 0 1174 182 43 38 chr15 24999461 24999808 -76380713 - L1MEc LINE L1 -4176 2220 1872 620 246 77 49 chr15 24999792 25000182 -76380339 - L1MEc LINE L1 -4993 1403 1003 * 2124 273 49 5 chr15 25000223 25000810 -76379711 - L1MEc LINE L1 -5578 818 206 942 282 59 17 chr15 25000818 25001105 -76379416 + ERVL LTR ERVL 1341 1639 -4125 261 0 0 0 chr15 25001789 25001818 -76378703 + (CA)n Simple_repeat Simple_repeat 2 30 0 184 306 81 62 chr15 25002540 25002773 -76377748 - L2 LINE L2 -557 2757 2512 2171 110 3 0 chr15 25002773 25003093 -76377428 + AluSg SINE Alu 1 321 0 184 306 81 62 chr15 25003093 25003243 -76377278 - L2 LINE L2 -802 2512 2366 183 263 53 18 chr15 25003303 25003360 -76377161 + MIR3 SINE MIR 10 68 -140 1802 189 39 8 chr15 25003610 25003970 -76376551 + MLT2D LTR ERVL 3 373 -41 225 246 29 0 chr15 25003970 25004039 -76376482 + (TA)n Simple_repeat Simple_repeat 2 72 0 257 224 0 0 chr15 25004041 25004099 -76376422 + MLT2D LTR ERVL 455 512 -8 2259 89 3 7 chr15 25005165 25005456 -76375065 + AluSg1 SINE Alu 14 303 -6 1156 101 0 0 chr15 25006103 25006252 -76374269 + AluSg/x SINE Alu 149 297 -15 303 177 302 10 chr15 25009474 25009570 -76370951 + MLT1E1 LTR MaLR 2 125 -529 3985 166 26 35 chr15 25009659 25010441 -76370080 + LTR1 LTR ERV1 11 785 0 574 225 0 0 chr15 25010441 25010552 -76369969 + MLT1E1 LTR MaLR 537 647 -7 828 201 65 15 chr15 25010555 25010754 -76369767 + MLT1A2 LTR MaLR 1 209 -165 4494 29 0 0 chr15 25010774 25011295 -76369226 - L1PA5 LINE L1 -1795 4351 3831 8650 38 7 2 chr15 25011295 25013100 -76367421 + L1PA5 LINE L1 4342 6151 -3 761 200 33 7 chr15 25013146 25013296 -76367225 + MLT1A2 LTR MaLR 237 390 0 317 185 169 23 chr15 25015648 25015778 -76364743 + Charlie4a DNA MER1_type 251 399 -109 2395 80 0 13 chr15 25015789 25016102 -76364419 - AluY SINE Alu -2 309 1 1098 60 0 8 chr15 25016103 25016236 -76364285 - AluY SINE Alu -179 132 1 447 125 0 0 chr15 25016244 25016308 -76364213 + Charlie4a DNA MER1_type 408 471 -37 583 274 81 62 chr15 25016345 25017032 -76363489 - L1MEd LINE L1 -4682 1628 871 475 290 38 27 chr15 25017952 25018276 -76362245 + L1M4 LINE L1 4318 4657 -1489 3456 162 89 60 chr15 25018527 25018857 -76361664 - L1MB3 LINE L1 -1 6182 5863 2392 72 10 7 chr15 25018857 25019161 -76361360 - AluY SINE Alu -6 305 1 3456 162 89 60 chr15 25019161 25019490 -76361031 - L1MB3 LINE L1 -320 5863 5545 1964 142 6 19 chr15 25019490 25019801 -76360720 - AluJb SINE Alu 0 312 6 3456 162 89 60 chr15 25019801 25019939 -76360582 - L1MB3 LINE L1 -638 5545 5413 2510 139 39 24 chr15 25019939 25020407 -76360114 - L1MA9 LINE L1 -3 6309 5835 3456 162 89 60 chr15 25020407 25020806 -76359715 - L1MB3 LINE L1 -770 5413 4931 21 57 0 0 chr15 25020807 25020842 -76359679 + AT_rich Low_complexity Low_complexity 1 35 0 2191 112 3 16 chr15 25021078 25021382 -76359139 + AluSx SINE Alu 1 300 -12 2170 113 0 0 chr15 25022415 25022723 -76357798 + AluSx SINE Alu 1 308 0 237 303 37 41 chr15 25022727 25022740 -76357781 + L1MC4a LINE L1 4123 4135 -2011 1947 221 94 29 chr15 25022740 25023354 -76357167 + MLT1E1 LTR MaLR 1 654 0 237 303 37 41 chr15 25023354 25023558 -76356963 + L1MC4a LINE L1 4135 4339 -1807 2512 131 52 24 chr15 25023559 25023884 -76356637 - Tigger2a DNA MER2_type -2275 433 92 195 42 0 0 chr15 25023884 25023908 -76356613 + (GGA)n Simple_repeat Simple_repeat 3 26 0 2512 131 52 24 chr15 25023908 25024001 -76356520 - Tigger2a DNA MER2_type -2616 92 3 403 299 125 5 chr15 25024004 25024188 -76356333 - MIR SINE MIR -7 255 50 253 294 52 0 chr15 25024468 25024621 -76355900 + L1MC4a LINE L1 4883 5043 -1103 330 316 73 38 chr15 25025264 25025692 -76354829 + L1MC4a LINE L1 5260 5706 -415 285 270 98 23 chr15 25025713 25025887 -76354634 + L1MC4a LINE L1 5751 5937 -1871 219 139 0 0 chr15 25026225 25026261 -76354260 + (TA)n Simple_repeat Simple_repeat 2 37 0 270 81 0 0 chr15 25026266 25026303 -76354218 + (TG)n Simple_repeat Simple_repeat 2 38 0 1783 159 22 0 chr15 25026309 25026585 -76353936 - AluJb SINE Alu -30 282 1 287 292 30 77 chr15 25028985 25029082 -76351439 + L2 LINE L2 2613 2700 -614 2468 90 0 0 chr15 25029082 25029383 -76351138 + AluSx SINE Alu 1 301 -11 287 292 30 77 chr15 25029383 25029453 -76351068 + L2 LINE L2 2700 2772 -542 1950 131 0 24 chr15 25030260 25030551 -76349970 + AluSx SINE Alu 21 304 -8 23 33 0 0 chr15 25030551 25030581 -76349940 + AT_rich Low_complexity Low_complexity 1 30 0 477 257 129 83 chr15 25030642 25031009 -76349512 - HAL1 LINE L1 -115 2392 1999 1978 194 6 0 chr15 25031009 25031355 -76349166 - MER7A DNA MER2_type 0 346 1 477 257 129 83 chr15 25031355 25031435 -76349086 - HAL1 LINE L1 -508 1999 1924 437 228 71 16 chr15 25031436 25031620 -76348901 + HAL1 LINE L1 1716 1909 -598 1805 106 14 48 chr15 25031663 25031955 -76348566 - AluSx SINE Alu -30 282 1 318 319 200 0 chr15 25031961 25032146 -76348375 - HAL1 LINE L1 -788 1719 1498 296 254 101 63 chr15 25032149 25032338 -76348183 - L2 LINE L2 -10 3303 3108 248 255 134 34 chr15 25032511 25032750 -76347771 - HAL1 LINE L1 -1171 1336 1074 343 280 99 55 chr15 25032753 25033070 -76347451 - L1MC4 LINE L1 -27 8015 7556 2125 89 64 0 chr15 25033319 25033601 -76346920 - AluSq SINE Alu -13 300 1 806 159 8 0 chr15 25033604 25033736 -76346785 - FLAM_A SINE Alu 0 133 1 1066 282 94 54 chr15 25034657 25034765 -76345756 - L1ME3A LINE L1 -297 5873 5771 2386 78 3 0 chr15 25034765 25035058 -76345463 - AluSg SINE Alu -16 294 1 1066 282 94 54 chr15 25035058 25035780 -76344741 - L1ME3A LINE L1 -399 5771 4996 855 251 119 52 chr15 25035790 25036495 -76344026 - L1ME3A LINE L1 -1197 4949 4031 704 284 163 34 chr15 25036552 25037536 -76342985 - L1ME3A LINE L1 -2734 3412 2302 26323 31 6 0 chr15 25037738 25041652 -76338869 + L1PA4 LINE L1 2252 6175 0 262 280 128 0 chr15 25042304 25042429 -76338092 - MER117 DNA MER1_type 0 197 57 315 268 85 20 chr15 25043168 25043436 -76337085 + L1M3d LINE L1 909 1187 -4704 396 251 144 46 chr15 25043628 25043967 -76336554 + L1MEc LINE L1 1704 1991 -4549 528 273 16 44 chr15 25043967 25044150 -76336371 + HAL1 LINE L1 138 315 -2192 1998 212 75 21 chr15 25044158 25044677 -76335844 - LTR55 LTR ERV -1 547 1 1042 248 234 18 chr15 25044887 25045553 -76334968 + HAL1 LINE L1 1671 2480 -27 2401 98 0 6 chr15 25045961 25046276 -76334245 + AluSq SINE Alu 1 313 0 2140 70 10 37 chr15 25047482 25047781 -76332740 + AluY SINE Alu 1 291 -20 2835 154 90 47 chr15 25047917 25048474 -76332047 - LTR12 LTR ERV1 -133 581 1 2165 103 3 31 chr15 25048992 25049312 -76331209 - AluY SINE Alu 0 311 1 223 224 21 35 chr15 25049942 25050085 -76330436 + (TTAA)n Simple_repeat Simple_repeat 4 144 0 2148 159 118 25 chr15 25051346 25051786 -76328735 - MLT1D LTR MaLR -2 503 23 2057 122 0 3 chr15 25052196 25052490 -76328031 - AluSx SINE Alu -19 293 1 221 360 0 10 chr15 25052936 25053036 -76327485 - L3 LINE CR1 -633 944 846 624 188 0 33 chr15 25053036 25053217 -76327304 + (TCCA)n Simple_repeat Simple_repeat 3 177 0 1554 205 3 0 chr15 25053217 25053500 -76327021 - AluJb SINE Alu -28 284 1 333 283 125 18 chr15 25054182 25054454 -76326067 + L2 LINE L2 2986 3286 -27 1093 111 0 26 chr15 25054478 25054654 -76325867 + AluSg/x SINE Alu 136 307 0 217 265 94 65 chr15 25055049 25055219 -76325302 - MIR SINE MIR -42 220 46 50 0 0 0 chr15 25055416 25055466 -76325055 + AT_rich Low_complexity Low_complexity 1 50 0 302 222 12 0 chr15 25059634 25059715 -76320806 - L1MC4 LINE L1 -1346 6696 6615 347 196 11 76 chr15 25059781 25059873 -76320648 - MER81 DNA DNA -2 112 27 1243 196 0 14 chr15 25062281 25062501 -76318020 + MER101B LTR ERV1 1 217 -353 765 214 22 45 chr15 25062836 25063014 -76317507 - MER82 DNA MER2_type -472 181 8 2362 163 216 161 chr15 25063020 25063264 -76317257 + L1MD3 LINE L1 6659 6888 -1107 444 19 0 0 chr15 25063264 25063317 -76317204 + (CA)n Simple_repeat Simple_repeat 2 54 0 2362 163 216 161 chr15 25063317 25063686 -76316835 + L1MD3 LINE L1 6888 7235 -760 604 230 36 7 chr15 25063686 25063825 -76316696 + MLT1A1 LTR MaLR 6 148 -419 2362 163 216 161 chr15 25063825 25064241 -76316280 + L1MD3 LINE L1 7235 7891 -104 2787 150 27 16 chr15 25064891 25065378 -76315143 + L1MB3 LINE L1 5584 6075 -108 228 299 141 4 chr15 25065780 25066014 -76314507 + L2 LINE L2 2138 2403 -911 589 250 42 32 chr15 25067544 25067791 -76312730 - MER4C LTR ERV1 0 597 325 948 95 7 7 chr15 25068121 25068258 -76312263 + MLT1A1 LTR MaLR 1 137 -228 3785 194 70 36 chr15 25068280 25069104 -76311417 + MER21B LTR ERV1 12 863 0 1229 164 26 17 chr15 25069114 25069345 -76311176 + MLT1A1 LTR MaLR 133 365 0 386 291 94 24 chr15 25069345 25069623 -76310898 + MLT1L LTR MaLR 57 461 -154 1365 206 120 59 chr15 25069693 25070169 -76310352 - MLT1D LTR MaLR 0 505 1 36 23 0 0 chr15 25070215 25070258 -76310263 + AT_rich Low_complexity Low_complexity 1 43 0 1503 114 4 92 chr15 25070533 25070806 -76309715 - AluJb SINE Alu -14 298 50 2097 92 3 46 chr15 25070846 25071151 -76309370 + AluSx SINE Alu 1 292 -20 2550 154 31 1 chr15 25072931 25073574 -76306947 - L1PA13 LINE L1 -626 5539 4874 3788 121 40 8 chr15 25073577 25074182 -76306339 + L1PA13 LINE L1 5540 6163 0 1138 272 175 18 chr15 25076690 25077303 -76303218 - L1ME4a LINE L1 -57 6064 5356 269 289 157 25 chr15 25077545 25077666 -76302855 + MIR SINE MIR 46 182 -80 794 238 121 0 chr15 25077738 25077978 -76302543 + MLT1F1 LTR MaLR 299 567 0 216 100 0 0 chr15 25077980 25078010 -76302511 + MIR SINE MIR 196 225 -37 714 256 102 63 chr15 25078037 25078498 -76302023 + MLT1H LTR MaLR 71 549 0 3782 128 2 6 chr15 25078710 25079239 -76301282 + MER1A DNA MER1_type 1 527 0 2581 171 89 0 chr15 25081041 25081514 -76299007 - MLT2B2 LTR ERVL 0 515 1 1527 171 14 31 chr15 25083030 25083317 -76297204 + AluJo SINE Alu 1 282 -30 2016 103 3 3 chr15 25083416 25083730 -76296791 + AluSx SINE Alu 3 316 0 3483 130 27 30 chr15 25084491 25084541 -76295980 - L1MB3 LINE L1 -3 6180 6131 1848 135 24 0 chr15 25084541 25084838 -76295683 - AluSg SINE Alu -6 304 1 3483 130 27 30 chr15 25084838 25085389 -76295132 - L1MB3 LINE L1 -52 6131 5581 1981 111 0 4 chr15 25085401 25085701 -76294820 + AluSq SINE Alu 10 308 0 322 280 70 14 chr15 25086450 25086593 -76293928 + L1MB8 LINE L1 6027 6177 -1 2942 190 26 3 chr15 25086721 25087301 -76293220 + L1MB3 LINE L1 5591 6183 0 370 306 214 20 chr15 25087525 25087777 -76292744 + L3 LINE CR1 192 492 -1085 253 245 50 86 chr15 25087950 25088089 -76292432 + L3 LINE CR1 743 876 -701 22 35 0 0 chr15 25088802 25088831 -76291690 + AT_rich Low_complexity Low_complexity 1 29 0 355 231 0 0 chr15 25089062 25089127 -76291394 - L2 LINE L2 0 3272 3208 291 288 38 38 chr15 25089324 25089456 -76291065 - L2 LINE L2 -583 2731 2600 2101 114 3 0 chr15 25091394 25091693 -76288828 + AluSq SINE Alu 1 300 -13 25 31 0 0 chr15 25091952 25091984 -76288537 + AT_rich Low_complexity Low_complexity 1 32 0 1784 143 30 50 chr15 25092147 25092248 -76288273 + L1MB3 LINE L1 5824 5925 -258 2201 94 0 7 chr15 25092248 25092565 -76287956 - AluSx SINE Alu 0 312 1 1784 143 30 50 chr15 25092565 25092826 -76287695 + L1MB3 LINE L1 5925 6179 -4 30 0 0 0 chr15 25092827 25092857 -76287664 + AT_rich Low_complexity Low_complexity 1 30 0 239 289 28 42 chr15 25093583 25093725 -76286796 - MER117 DNA MER1_type -38 159 20 27 32 0 32 chr15 25095457 25095476 -76285045 + AT_rich Low_complexity Low_complexity 1 19 -42 487 0 32 0 chr15 25095476 25095539 -76284982 + (CA)n Simple_repeat Simple_repeat 2 66 0 2215 81 0 0 chr15 25095545 25095830 -76284691 - AluSx SINE Alu -27 285 1 27 32 0 32 chr15 25095830 25095866 -76284655 + AT_rich Low_complexity Low_complexity 24 61 0 496 269 85 40 chr15 25096450 25096673 -76283848 - Charlie8 DNA MER1_type -2184 233 1 2031 135 0 6 chr15 25097611 25097922 -76282599 - AluSx SINE Alu -3 309 1 2158 240 64 18 chr15 25099834 25100487 -76280034 + L1ME3A LINE L1 5488 6170 0 910 237 25 29 chr15 25100966 25101059 -76279462 - MER33 DNA MER1_type -2264 321 229 243 0 0 0 chr15 25101059 25101086 -76279435 + (TA)n Simple_repeat Simple_repeat 1 27 0 2450 56 0 10 chr15 25101086 25101392 -76279129 - AluY SINE Alu -8 303 1 910 237 25 29 chr15 25101392 25101515 -76279006 - MER33 DNA MER1_type -2355 230 108 1671 164 40 95 chr15 25101515 25101688 -76278833 + MSTB LTR MaLR 1 182 -244 1818 84 0 0 chr15 25101688 25101925 -76278596 + AluSq SINE Alu 1 237 -76 1671 164 40 95 chr15 25101925 25101978 -76278543 + MSTB LTR MaLR 182 236 -190 2425 44 0 41 chr15 25101978 25102293 -76278228 + AluY SINE Alu 1 302 -9 1671 164 40 95 chr15 25102293 25102516 -76278005 + MSTB LTR MaLR 236 426 0 910 237 25 29 chr15 25102516 25102576 -76277945 - MER33 DNA MER1_type -2477 108 44 306 132 0 0 chr15 25102668 25102721 -76277800 + (TC)n Simple_repeat Simple_repeat 2 54 0 423 56 0 0 chr15 25102721 25102775 -76277746 + (CA)n Simple_repeat Simple_repeat 1 54 0 542 307 77 38 chr15 25102824 25103163 -76277358 + MLT1K LTR MaLR 237 588 0 243 0 0 0 chr15 25103404 25103431 -76277090 + (A)n Simple_repeat Simple_repeat 1 27 0 437 268 150 7 chr15 25104293 25104446 -76276075 - MER5A DNA MER1_type -6 183 9 21 0 0 0 chr15 25104683 25104704 -76275817 + AT_rich Low_complexity Low_complexity 1 21 0 6049 168 45 15 chr15 25104920 25105052 -76275469 - L1MC1 LINE L1 -2 6331 6204 2092 121 0 37 chr15 25105052 25105375 -76275146 - AluSq SINE Alu -2 311 1 6049 168 45 15 chr15 25105375 25106696 -76273825 - L1MC1 LINE L1 -129 6204 4829 581 246 82 10 chr15 25106713 25106908 -76273613 - L1MC1 LINE L1 -1353 4793 4585 32 26 0 0 chr15 25107164 25107203 -76273318 + AT_rich Low_complexity Low_complexity 1 39 0 205 261 0 0 chr15 25107610 25107656 -76272865 + (CA)n Simple_repeat Simple_repeat 2 47 0 909 270 92 57 chr15 25108133 25108674 -76271847 + L1MB5 LINE L1 8 567 -5975 3597 130 9 65 chr15 25108700 25109379 -76271142 + L1MA5 LINE L1 5268 5908 -392 2751 134 23 48 chr15 25109425 25109476 -76271045 + L1MA5 LINE L1 5793 5844 -456 2054 118 3 0 chr15 25109476 25109780 -76270741 + AluSx SINE Alu 3 307 -5 2751 134 23 48 chr15 25109780 25110249 -76270272 + L1MA5 LINE L1 5844 6300 0 2793 234 66 66 chr15 25110273 25110760 -76269761 + L1MB5 LINE L1 592 1077 -5595 1908 155 0 0 chr15 25110760 25111057 -76269464 - AluSx SINE Alu -14 298 2 2793 234 66 66 chr15 25111057 25112196 -76268325 + L1MB5 LINE L1 1077 6664 -8 3879 169 113 64 chr15 25113160 25114498 -76266023 - pTR5 LTR ERV1 0 2438 743 197 319 33 22 chr15 25115242 25115333 -76265188 + MIR SINE MIR 95 186 -76 2117 108 3 0 chr15 25115787 25116082 -76264439 + AluSx SINE Alu 1 296 -16 1969 114 3 7 chr15 25116151 25116440 -76264081 + AluSx SINE Alu 1 288 -24 254 282 157 14 chr15 25116446 25116662 -76263859 + L1P LINE L1 4053 4299 -1847 5201 179 38 41 chr15 25116824 25118832 -76261689 - L1MA9 LINE L1 -1 7730 5719 217 0 61 0 chr15 25118832 25118865 -76261656 + (TAAAA)n Simple_repeat Simple_repeat 4 38 0 5201 179 38 41 chr15 25118865 25119397 -76261124 - L1MA9 LINE L1 -2012 5719 5187 1769 184 111 8 chr15 25119397 25119756 -76260765 + MSTD LTR MaLR 1 396 0 5201 179 38 41 chr15 25119756 25120411 -76260110 - L1MA9 LINE L1 -2544 5187 4532 1688 158 79 22 chr15 25120411 25120766 -76259755 + THE1C LTR MaLR 1 375 0 5201 179 38 41 chr15 25120766 25121844 -76258677 - L1MA9 LINE L1 -3199 4532 3323 1512 190 31 3 chr15 25121844 25122133 -76258388 - AluJo SINE Alu -15 297 1 5201 179 38 41 chr15 25122133 25122163 -76258358 - L1MA9 LINE L1 -4408 3323 3294 10769 209 61 18 chr15 25122194 25126066 -76254455 + L1MB7 LINE L1 2120 6167 -17 852 209 95 41 chr15 25126081 25126397 -76254124 + MER69 DNA AcHobo 2138 2470 -56 431 298 121 15 chr15 25126429 25126715 -76253806 + L1ME LINE L1 5429 5638 -528 31566 103 7 12 chr15 25127606 25133000 -76247521 + L1PA7 LINE L1 700 6091 -378 2247 60 3 18 chr15 25133000 25133282 -76247239 + AluY SINE Alu 19 296 -15 31566 103 7 12 chr15 25133282 25133659 -76246862 + L1PA7 LINE L1 6091 6468 -1 2019 122 42 0 chr15 25133787 25134074 -76246447 - AluSx SINE Alu -1 311 13 1077 66 7 0 chr15 25134174 25134310 -76246211 + L1PA7 LINE L1 6017 6153 -1 1698 141 67 20 chr15 25134438 25134735 -76245786 - AluSx SINE Alu -1 311 1 372 246 131 8 chr15 25134920 25135050 -76245471 - MER104 DNA Tc2 -14 166 21 402 258 80 13 chr15 25135241 25135392 -76245129 + MER69A DNA AcHobo 13 173 -4 2006 164 49 27 chr15 25135559 25135925 -76244596 + MLT1A2 LTR MaLR 1 374 0 316 262 115 25 chr15 25136946 25137068 -76243453 - L2 LINE L2 0 3313 3181 3023 141 58 0 chr15 25137180 25137662 -76242859 - L1MB2 LINE L1 -2 6169 5660 988 210 223 3 chr15 25138407 25138654 -76241867 - MLT2B2 LTR ERVL -181 233 1 786 201 187 10 chr15 25138654 25138863 -76241658 + MLT1D LTR MaLR 322 505 0 898 242 41 0 chr15 25138951 25139145 -76241376 + MER3 DNA MER1_type 4 205 -4 818 216 11 28 chr15 25139156 25139337 -76241184 + MER5B DNA MER1_type 1 178 0 245 179 128 51 chr15 25140090 25140168 -76240353 + HAL1b LINE L1 604 687 -661 574 258 109 45 chr15 25140347 25140568 -76239953 - MIR SINE MIR -27 235 1 865 173 24 18 chr15 25140890 25141058 -76239463 - L1MA9 LINE L1 0 6312 6144 1154 184 148 0 chr15 25141064 25141338 -76239183 + AluJo SINE Alu 2 311 0 683 157 0 0 chr15 25141341 25141456 -76239065 - L1MA9 LINE L1 -178 6134 6020 204 40 0 0 chr15 25142244 25142269 -76238252 + (TC)n Simple_repeat Simple_repeat 1 25 0 * 231 36 0 0 chr15 25142268 25142296 -76238225 + (CA)n Simple_repeat Simple_repeat 1 28 0 471 157 0 0 chr15 25142368 25142438 -76238083 - MER8 DNA MER2_type 0 239 170 * 2736 131 18 31 chr15 25142421 25142840 -76237681 + Tigger2 DNA MER2_type 2267 2681 -37 1588 175 133 30 chr15 25142840 25143245 -76237276 + LTR7 LTR ERV1 3 449 -1 2736 131 18 31 chr15 25143245 25143283 -76237238 + Tigger2 DNA MER2_type 2681 2718 0 1683 241 27 31 chr15 25143787 25144113 -76236408 + L1M4 LINE L1 4256 4581 -1565 1143 188 14 36 chr15 25144113 25144336 -76236185 + MER20B DNA MER1_type 2 219 0 1683 241 27 31 chr15 25144336 25144494 -76236027 + L1M4 LINE L1 4581 4738 -1408 1750 222 102 14 chr15 25144992 25145501 -76235020 + L1M4 LINE L1 4747 5300 -846 3136 224 21 34 chr15 25145501 25146278 -76234243 + L1MB7 LINE L1 3 769 -5773 4538 182 70 52 chr15 25146282 25147528 -76232993 + L1MB7 LINE L1 4704 5928 -736 5365 105 68 7 chr15 25147528 25148263 -76232258 - LTR17 LTR ERV1 0 780 1 4538 182 70 52 chr15 25148263 25148962 -76231559 + L1MB7 LINE L1 5928 6614 -50 1743 149 20 40 chr15 25149577 25149879 -76230642 - AluJo SINE Alu -16 296 1 379 316 106 28 chr15 25149965 25150389 -76230132 + L2 LINE L2 1820 2276 -1038 288 292 188 0 chr15 25151122 25151266 -76229255 - L2 LINE L2 0 3272 3102 491 294 0 0 chr15 25152350 25152527 -76227994 + G-rich Low_complexity Low_complexity 1 177 0 1448 198 29 3 chr15 25152670 25152983 -76227538 - MER74A LTR ERVL -222 336 16 764 288 171 16 chr15 25153686 25154137 -76226384 + MER20B DNA MER1_type 213 733 -50 1239 110 48 118 chr15 25154870 25154978 -76225543 - L1MA8 LINE L1 -5 6286 6172 2036 129 0 0 chr15 25154978 25155265 -76225256 - AluSx SINE Alu -25 287 1 1239 110 48 118 chr15 25155265 25155468 -76225053 - L1MA8 LINE L1 -119 6172 6013 285 29 0 0 chr15 25157406 25157440 -76223081 + (A)n Simple_repeat Simple_repeat 1 34 0 794 165 0 0 chr15 25208699 25208820 -76171701 + FLAM_A SINE Alu 1 121 -12 499 314 116 59 chr15 25208912 25209260 -76171261 + L1MC4a LINE L1 4161 4547 -1599 2122 121 7 0 chr15 25209260 25209565 -76170956 + AluSx SINE Alu 1 307 -5 499 314 116 59 chr15 25209565 25209709 -76170812 + L1MC4a LINE L1 4547 4681 -1465 1377 246 81 38 chr15 25209761 25210256 -76170265 + MLT1H1 LTR MaLR 38 553 -2 521 155 16 16 chr15 25210266 25210279 -76170242 + GA-rich Low_complexity Low_complexity 3 15 -116 2230 81 0 7 chr15 25210279 25210575 -76169946 + AluSg SINE Alu 1 294 -16 521 155 16 16 chr15 25210575 25210690 -76169831 + GA-rich Low_complexity Low_complexity 14 131 0 386 281 294 0 chr15 25210751 25210979 -76169542 - L2 LINE L2 -4 3309 3015 347 295 127 27 chr15 25210994 25211363 -76169158 + L1MC4a LINE L1 5518 5923 -1885 23 0 0 0 chr15 25211682 25211705 -76168816 + AT_rich Low_complexity Low_complexity 1 23 0 1684 135 11 18 chr15 25212220 25212501 -76168020 + AluJo SINE Alu 1 279 -33 220 180 24 18 chr15 25212611 25212666 -76167855 - MIR SINE MIR -52 156 98 250 140 20 20 chr15 25214250 25214300 -76166221 - MIR SINE MIR -115 147 98 1687 135 12 55 chr15 25216213 25216539 -76163982 - AluJo SINE Alu 0 312 1 216 263 100 38 chr15 25216590 25216670 -76163851 - L2 LINE L2 -32 3281 3197 394 310 9 0 chr15 25217283 25217399 -76163122 + MLT1H LTR MaLR 108 224 -325 313 267 95 43 chr15 25217399 25217515 -76163006 - MIR SINE MIR -132 130 9 279 0 0 0 chr15 25218071 25218102 -76162419 + (TG)n Simple_repeat Simple_repeat 2 32 0 2017 120 0 3 chr15 25218191 25218483 -76162038 + AluSq SINE Alu 1 291 -22 2031 91 3 21 chr15 25218485 25218797 -76161724 + AluY SINE Alu 1 307 0 2392 63 7 0 chr15 25218964 25219267 -76161254 - AluY SINE Alu -6 305 1 269 298 67 0 chr15 25219415 25219519 -76161002 - L1ME LINE L1 -357 5813 5703 415 313 74 44 chr15 25219546 25219843 -76160678 - L1ME LINE L1 -459 5662 5357 370 260 0 32 chr15 25219871 25219994 -76160527 - L1ME LINE L1 -1567 4579 4461 22 35 0 0 chr15 25220998 25221027 -76159494 + AT_rich Low_complexity Low_complexity 1 29 0 222 37 0 0 chr15 25221077 25221104 -76159417 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 1786 132 3 21 chr15 25221107 25221395 -76159126 - AluSx SINE Alu -25 287 5 456 285 72 101 chr15 25221405 25221861 -76158660 + L1MDb LINE L1 1148 1697 -1070 1733 173 3 3 chr15 25221861 25222167 -76158354 + AluJb SINE Alu 5 310 -2 456 285 72 101 chr15 25222167 25222208 -76158313 + L1MDb LINE L1 1697 1738 -1029 1981 260 58 73 chr15 25222338 25223216 -76157305 - L1MC4 LINE L1 -6 8036 7146 180 0 0 0 chr15 25223216 25223236 -76157285 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 1981 260 58 73 chr15 25223236 25223256 -76157265 - L1MC4 LINE L1 -896 7146 7127 2221 73 0 3 chr15 25223256 25223542 -76156979 - AluY SINE Alu -26 285 1 1981 260 58 73 chr15 25223542 25223602 -76156919 - L1MC4 LINE L1 -915 7127 7090 201 94 0 0 chr15 25223602 25223634 -76156887 + (TATG)n Simple_repeat Simple_repeat 1 32 0 1792 149 17 3 chr15 25223645 25223941 -76156580 - L1M2 LINE L1 -612 5700 5401 772 243 27 0 chr15 25223941 25224089 -76156432 - MER58A DNA MER1_type 0 152 1 388 331 238 5 chr15 25224577 25224955 -76155566 + L2 LINE L2 2257 2722 -592 2314 193 52 4 chr15 25225044 25225525 -76154996 + MLT1D LTR MaLR 1 504 -1 347 271 33 49 chr15 25225751 25225873 -76154648 - MIR SINE MIR -9 253 134 2085 146 108 28 chr15 25225873 25226180 -76154341 - Tigger2 DNA MER2_type 0 2718 2372 186 43 0 0 chr15 25226180 25226203 -76154318 + (GGA)n Simple_repeat Simple_repeat 2 24 0 2085 146 108 28 chr15 25226203 25226285 -76154236 - Tigger2 DNA MER2_type -346 2372 2298 545 161 5 38 chr15 25226304 25226490 -76154031 + GA-rich Low_complexity Low_complexity 1 180 0 207 256 0 37 chr15 25226558 25226640 -76153881 + (GTTTG)n Simple_repeat Simple_repeat 5 83 0 291 54 0 0 chr15 25227963 25228000 -76152521 + (TTCA)n Simple_repeat Simple_repeat 2 38 0 263 308 48 10 chr15 25228049 25228153 -76152368 - L2 LINE L2 -52 3261 3154 187 274 226 0 chr15 25228173 25228275 -76152246 - L2 LINE L2 -8 3305 3181 307 351 58 0 chr15 25228366 25228537 -76151984 - L2 LINE L2 -610 2704 2524 731 189 44 9 chr15 25228823 25229049 -76151472 - MER57A LTR ERV1 0 403 201 359 183 49 12 chr15 25229034 25229116 -76151405 - LTR54 LTR ERV1 -271 239 155 * 424 81 16 0 chr15 25229116 25229178 -76151343 + (TC)n Simple_repeat Simple_repeat 2 64 0 761 163 95 0 chr15 25229205 25229352 -76151169 - LTR54 LTR ERV1 -345 165 5 313 241 25 13 chr15 25229495 25229574 -76150947 + GA-rich Low_complexity Low_complexity 3 82 0 2205 127 0 3 chr15 25229781 25230088 -76150433 - AluSc SINE Alu -3 306 1 5624 191 45 28 chr15 25230844 25232304 -76148217 + L1MB3 LINE L1 3982 5415 -768 2450 67 3 3 chr15 25232304 25232602 -76147919 - AluY SINE Alu -13 298 1 5624 191 45 28 chr15 25232602 25232809 -76147712 + L1MB3 LINE L1 5415 5617 -566 333 0 0 0 chr15 25232809 25232846 -76147675 + (TG)n Simple_repeat Simple_repeat 1 37 0 5624 191 45 28 chr15 25232846 25232869 -76147652 + L1MB3 LINE L1 5617 5638 -545 1720 178 0 0 chr15 25232869 25233133 -76147388 - AluJb SINE Alu -32 280 17 5624 191 45 28 chr15 25233133 25233612 -76146909 + L1MB3 LINE L1 5638 6183 0 1456 165 26 0 chr15 25233607 25233873 -76146648 + L1M3 LINE L1 5428 5700 -480 * 265 241 130 37 chr15 25234177 25234285 -76146236 + L2 LINE L2 3187 3304 -9 1934 136 0 52 chr15 25235008 25235194 -76145327 - AluSx SINE Alu -5 307 144 2585 71 0 0 chr15 25235194 25235505 -76145016 - AluY SINE Alu 0 311 1 1934 136 0 52 chr15 25235505 25235642 -76144879 - AluSx SINE Alu -168 144 1 495 242 33 0 chr15 25235831 25235951 -76144570 + MIR SINE MIR 139 262 0 916 182 17 22 chr15 25236879 25237060 -76143461 - MLT2D LTR ERVL -234 180 1 1890 215 20 51 chr15 25237072 25237438 -76143083 + L1M4 LINE L1 4484 4829 -1317 1573 107 5 9 chr15 25237438 25237654 -76142867 - AluSg/x SINE Alu -13 297 83 1890 215 20 51 chr15 25237654 25237840 -76142681 + L1M4 LINE L1 4829 5019 -1127 606 309 55 60 chr15 25237963 25238129 -76142392 + HAL1b LINE L1 73 238 -1110 2274 94 3 0 chr15 25238129 25238444 -76142077 - AluSg SINE Alu 0 316 1 606 309 55 60 chr15 25238444 25238744 -76141777 + HAL1b LINE L1 238 539 -809 2947 82 13 0 chr15 25238749 25239140 -76141381 + L1PA10 LINE L1 5757 6152 -16 24 0 0 0 chr15 25239142 25239166 -76141355 + AT_rich Low_complexity Low_complexity 1 24 0 1594 169 29 88 chr15 25239341 25239796 -76140725 + L1MB7 LINE L1 4946 5373 -773 3557 146 51 2 chr15 25239800 25239923 -76140598 + L1MA9 LINE L1 5653 5768 -544 258 105 0 0 chr15 25239923 25239961 -76140560 + (TG)n Simple_repeat Simple_repeat 1 38 0 3557 146 51 2 chr15 25239961 25240466 -76140055 + L1MA9 LINE L1 5768 6312 0 371 56 19 0 chr15 25240484 25240538 -76139983 + (TAGA)n Simple_repeat Simple_repeat 2 56 0 4266 160 23 27 chr15 25240867 25241070 -76139451 + L1MB7 LINE L1 5366 5568 -616 2613 56 0 0 chr15 25241070 25241375 -76139146 + AluY SINE Alu 1 305 -6 4266 160 23 27 chr15 25241375 25241988 -76138533 + L1MB7 LINE L1 5568 6179 -5 1113 141 32 2 chr15 25242025 25242273 -76138248 + AluSx SINE Alu 2 309 -1 1650 232 99 92 chr15 25242560 25242634 -76137887 + L1MC5 LINE L1 6541 6613 -1348 468 0 0 0 chr15 25242634 25242686 -76137835 + (TG)n Simple_repeat Simple_repeat 2 53 0 1650 232 99 92 chr15 25242686 25243159 -76137362 + L1MC5 LINE L1 6613 7108 -853 2090 129 7 3 chr15 25243159 25243454 -76137067 - AluSx SINE Alu -16 296 1 1650 232 99 92 chr15 25243454 25243771 -76136750 + L1MC5 LINE L1 7108 7421 -540 1057 133 0 0 chr15 25243826 25243977 -76136544 + AluSg/x SINE Alu 146 296 -16 515 248 7 0 chr15 25243986 25244139 -76136382 + GA-rich Low_complexity Low_complexity 4 157 0 1930 135 40 10 chr15 25244212 25244515 -76136006 + AluJb SINE Alu 1 312 0 308 314 25 38 chr15 25244645 25244804 -76135717 + L1ME3A LINE L1 6013 6169 -1 273 301 152 2 chr15 25245251 25245399 -76135122 + MIR SINE MIR 16 182 -62 2522 73 0 3 chr15 25245896 25246209 -76134312 + AluSx SINE Alu 1 312 0 883 220 17 0 chr15 25246937 25247107 -76133414 + MLT1C LTR MaLR 1 173 -217 1020 151 58 16 chr15 25247107 25247394 -76133127 + AluJo SINE Alu 1 353 0 998 222 32 5 chr15 25247426 25247642 -76132879 + MLT1C LTR MaLR 246 467 0 930 238 110 12 chr15 25247810 25248129 -76132392 - MSTD LTR MaLR 0 396 21 2605 116 16 49 chr15 25248129 25248576 -76131945 + MSTB1 LTR MaLR 1 432 0 930 238 110 12 chr15 25248576 25248600 -76131921 - MSTD LTR MaLR -375 21 1 300 182 61 0 chr15 25248769 25248835 -76131686 + LTR50 LTR ERVL 1 70 -725 251 299 106 23 chr15 25248873 25249090 -76131431 + L2 LINE L2 666 900 -2414 1289 224 131 8 chr15 25249242 25249608 -76130913 + L1MD2 LINE L1 5949 6359 0 231 333 138 8 chr15 25249985 25250108 -76130413 + L2 LINE L2 3134 3272 0 1356 157 39 74 chr15 25250152 25250176 -76130345 - L1MC3 LINE L1 0 7785 7762 1800 125 14 54 chr15 25250176 25250314 -76130207 + AluSx SINE Alu 1 143 -167 2339 43 0 7 chr15 25250314 25250593 -76129928 + AluY SINE Alu 35 311 0 1800 125 14 54 chr15 25250593 25250776 -76129745 + AluSx SINE Alu 143 310 0 1356 157 39 74 chr15 25250776 25251087 -76129434 - L1MC3 LINE L1 -23 7762 7461 4053 163 59 131 chr15 25251098 25251631 -76128890 - L1MC3 LINE L1 -658 7127 6557 299 65 22 0 chr15 25251631 25251677 -76128844 + MADE1 DNA Mariner 1 47 -33 4053 163 59 131 chr15 25251677 25252159 -76128362 - L1MC3 LINE L1 -1228 6557 6172 2039 147 0 7 chr15 25252159 25252465 -76128056 - AluSx SINE Alu -8 304 1 4053 163 59 131 chr15 25252465 25252689 -76127832 - L1MC3 LINE L1 -1613 6172 5934 1411 116 5 0 chr15 25252789 25252996 -76127525 + AluSp SINE Alu 90 297 -16 2361 160 21 36 chr15 25252996 25253253 -76127268 - L1MC3 LINE L1 -1928 5857 5609 1798 161 3 7 chr15 25253253 25253552 -76126969 + AluJb SINE Alu 1 298 -14 2361 160 21 36 chr15 25253552 25253762 -76126759 - L1MC3 LINE L1 -2176 5609 5397 2598 64 0 0 chr15 25254098 25254409 -76126112 - AluY SINE Alu 0 311 1 285 280 21 0 chr15 25254934 25255027 -76125494 + MIR SINE MIR 59 153 -109 383 289 128 50 chr15 25255100 25255342 -76125179 + Charlie8 DNA MER1_type 6 266 -2151 436 32 16 16 chr15 25255850 25255913 -76124608 + (CAT)n Simple_repeat Simple_repeat 1 63 0 760 192 0 0 chr15 25256059 25256184 -76124337 - FLAM_A SINE Alu -8 125 1 3841 150 147 107 chr15 25256206 25256306 -76124215 - Tigger6a DNA MER2_type -514 1083 988 2705 36 0 0 chr15 25256306 25256610 -76123911 - AluY SINE Alu -7 304 1 3841 150 147 107 chr15 25256610 25257550 -76122971 - Tigger6a DNA MER2_type -609 988 1 286 255 7 111 chr15 25257550 25257703 -76122818 + L2 LINE L2 3169 3305 -8 24 0 0 0 chr15 25257931 25257955 -76122566 + AT_rich Low_complexity Low_complexity 1 24 0 1356 120 0 0 chr15 25257955 25258139 -76122382 - AluSg/x SINE Alu -16 294 111 297 212 0 15 chr15 25258310 25258376 -76122145 - L2 LINE L2 -301 2971 2907 578 246 50 17 chr15 25258683 25258862 -76121659 + MER5A DNA MER1_type 3 187 -2 2178 125 0 0 chr15 25259055 25259352 -76121169 - AluSx SINE Alu -15 297 1 358 277 190 39 chr15 25259496 25259806 -76120715 + L1ME LINE L1 5258 5617 -504 320 267 10 10 chr15 25260831 25260932 -76119589 - L1MC4a LINE L1 -1893 5915 5815 2125 114 10 3 chr15 25260968 25261265 -76119256 + AluSx SINE Alu 1 299 -13 272 287 140 15 chr15 25261270 25261406 -76119115 - L1ME3A LINE L1 -30 6140 5988 303 174 96 43 chr15 25261521 25261636 -76118885 - L1MC5 LINE L1 -431 7530 7410 2039 101 0 7 chr15 25261638 25261914 -76118607 - AluSc SINE Alu -2 307 34 260 294 50 102 chr15 25261937 25262235 -76118286 - HAL1b LINE L1 -809 539 277 1897 137 4 14 chr15 25262235 25262538 -76117983 - AluSx SINE Alu 0 308 9 260 294 50 102 chr15 25262538 25262758 -76117763 - HAL1b LINE L1 -1071 277 47 3160 64 52 9 chr15 25263171 25263205 -76117316 - MLT2A1 LTR ERVL -6 438 407 497 89 25 0 chr15 25263205 25263284 -76117237 + (TAGA)n Simple_repeat Simple_repeat 4 84 0 3160 64 52 9 chr15 25263284 25263669 -76116852 - MLT2A1 LTR ERVL -37 407 1 2245 64 0 44 chr15 25263936 25264280 -76116241 - AluY SINE Alu 0 331 1 368 164 15 0 chr15 25264680 25264747 -76115774 - L1MC4a LINE L1 -2035 5773 5706 956 205 252 20 chr15 25264752 25265054 -76115467 + MSTD LTR MaLR 1 372 -24 375 164 44 3 chr15 25265086 25265166 -76115355 + MSTD LTR MaLR 324 396 0 184 256 205 0 chr15 25265467 25265545 -76114976 - L2 LINE L2 -38 3234 3141 471 187 79 50 chr15 25268564 25268703 -76111818 + LTR45B LTR ERV1 342 484 -5 338 183 0 0 chr15 25269867 25269927 -76110594 + L2 LINE L2 3251 3310 -3 813 153 0 0 chr15 25270188 25270306 -76110215 + FLAM_C SINE Alu 1 118 -25 2249 112 7 0 chr15 25270563 25270867 -76109654 - AluSx SINE Alu -6 306 1 2667 180 13 42 chr15 25272135 25272206 -76108315 - MLT2B2 LTR ERVL 0 515 443 1985 119 51 14 chr15 25272206 25272500 -76108021 + AluSx SINE Alu 1 305 -7 2667 180 13 42 chr15 25272500 25272951 -76107570 - MLT2B2 LTR ERVL -72 443 8 2351 97 0 3 chr15 25273555 25273854 -76106667 + AluSg SINE Alu 1 298 -12 521 279 113 22 chr15 25274465 25274524 -76105997 - MIR SINE MIR -6 256 204 2272 104 0 3 chr15 25274524 25274823 -76105698 + AluY SINE Alu 1 298 -13 521 279 113 22 chr15 25274823 25274985 -76105536 - MIR SINE MIR -58 204 15 797 246 123 29 chr15 25275424 25275898 -76104623 - MLT2F LTR ERVL -23 640 98 1077 169 0 0 chr15 25275905 25276077 -76104444 + FRAM SINE Alu 1 172 -4 1171 53 0 0 chr15 25276521 25276654 -76103867 + AluY SINE Alu 1 133 -178 2595 55 3 3 chr15 25276655 25276964 -76103557 + AluY SINE Alu 1 309 -2 2470 187 118 42 chr15 25276973 25277598 -76102923 + L1MB1 LINE L1 5446 6118 -50 1228 102 0 18 chr15 25277699 25277865 -76102656 - AluSq SINE Alu -150 163 1 514 294 37 27 chr15 25278723 25278910 -76101611 - MIR SINE MIR -65 197 9 1606 73 9 18 chr15 25279177 25279395 -76101126 - AluSq SINE Alu -97 216 1 233 233 0 0 chr15 25279670 25279713 -76100808 + (CA)n Simple_repeat Simple_repeat 2 44 0 2580 215 92 42 chr15 25280012 25280229 -76100292 - L1MD2 LINE L1 -3 6750 6545 333 0 0 0 chr15 25280229 25280266 -76100255 + (TG)n Simple_repeat Simple_repeat 2 38 0 2580 215 92 42 chr15 25280266 25280754 -76099767 - L1MD2 LINE L1 -208 6545 5993 2011 128 3 0 chr15 25280754 25281050 -76099471 - AluSx SINE Alu -13 299 3 2580 215 92 42 chr15 25281050 25281195 -76099326 - L1MD2 LINE L1 -760 5993 5857 1579 122 50 4 chr15 25281205 25281467 -76099054 - AluSx SINE Alu -1 311 38 1281 217 97 26 chr15 25281485 25281587 -76098934 - L1MD2 LINE L1 -1794 4746 4653 2347 128 34 0 chr15 25281587 25281939 -76098582 + THE1B LTR MaLR 1 364 0 1281 217 97 26 chr15 25281939 25282219 -76098302 - L1MD2 LINE L1 -1887 4653 4337 554 250 61 0 chr15 25282333 25282529 -76097992 - L1MD2 LINE L1 -3003 3537 3330 4097 169 39 34 chr15 25282560 25282620 -76097901 - L1MB4 LINE L1 -41 6139 6081 2320 84 0 0 chr15 25282620 25282918 -76097603 + AluSc SINE Alu 1 298 -11 4097 169 39 34 chr15 25282918 25283733 -76096788 - L1MB4 LINE L1 -99 6081 5260 * 5303 238 89 65 chr15 25283727 25284110 -76096411 - L1MD2 LINE L1 -3351 3189 2816 1894 152 0 0 chr15 25284110 25284407 -76096114 - AluSx SINE Alu -15 297 1 5303 238 89 65 chr15 25284407 25285192 -76095329 - L1MD2 LINE L1 -3724 2816 2051 1978 139 3 0 chr15 25285192 25285501 -76095020 + AluSx SINE Alu 1 310 -2 5303 238 89 65 chr15 25285501 25286032 -76094489 - L1MD2 LINE L1 -4489 2051 1534 1928 109 20 7 chr15 25286032 25286326 -76094195 - AluSx SINE Alu -1 311 14 5303 238 89 65 chr15 25286326 25287689 -76092832 - L1MD2 LINE L1 -5006 1534 41 1744 132 0 29 chr15 25287857 25288137 -76092384 + AluSq SINE Alu 1 272 -41 2072 95 31 0 chr15 25289036 25289330 -76091191 + AluSx SINE Alu 1 303 -9 2208 152 40 71 chr15 25289800 25290279 -76090242 - MER21A LTR ERV1 -9 922 459 1490 64 9 36 chr15 25290281 25290500 -76090021 - AluY SINE Alu -98 213 1 1195 173 240 0 chr15 25290501 25290755 -76089766 - MER21B LTR ERV1 -548 315 1 265 280 51 42 chr15 25291800 25291918 -76088603 + MLT1H LTR MaLR 433 536 -13 416 264 42 0 chr15 25293045 25293189 -76087332 - MLT2E LTR ERVL -9 619 470 615 227 87 35 chr15 25293269 25293441 -76087080 - MLT2E LTR ERVL -318 310 130 575 245 125 35 chr15 25293606 25293806 -76086715 - MER20 DNA MER1_type -1 218 1 426 213 37 37 chr15 25293815 25293951 -76086570 + Charlie7 DNA MER1_type 2277 2412 -200 920 151 7 0 chr15 25293952 25294098 -76086423 + AluJo SINE Alu 1 147 -165 285 115 0 0 chr15 25294777 25294829 -76085692 + L1MB4 LINE L1 6129 6180 0 7002 225 29 32 chr15 25294875 25295115 -76085406 + L1M4 LINE L1 2964 3203 -2943 2285 100 0 3 chr15 25295115 25295426 -76085095 - AluSx SINE Alu -2 310 1 7002 225 29 32 chr15 25295426 25295733 -76084788 + L1M4 LINE L1 3203 3509 -2637 1497 178 44 17 chr15 25295733 25296062 -76084459 + AluJb SINE Alu 1 312 0 7002 225 29 32 chr15 25296062 25296907 -76083614 + L1M4 LINE L1 3509 4352 -1794 2106 124 0 0 chr15 25296907 25297214 -76083307 + AluSx SINE Alu 1 307 -5 7002 225 29 32 chr15 25297214 25297804 -76082717 + L1M4 LINE L1 4352 4942 -1204 376 244 11 22 chr15 25297819 25297909 -76082612 - L1MC4 LINE L1 -1339 6703 6615 328 221 11 63 chr15 25297879 25297974 -76082547 + L1MC4 LINE L1 6614 6703 -1339 * 2071 104 0 3 chr15 25297982 25298269 -76082252 - AluSc SINE Alu -23 286 1 3592 194 74 25 chr15 25298269 25298858 -76081663 + L1MB8 LINE L1 4891 5450 -728 2274 93 3 0 chr15 25298858 25299168 -76081353 + AluY SINE Alu 1 311 0 3592 194 74 25 chr15 25299168 25299793 -76080728 + L1MB8 LINE L1 5450 6168 -10 2107 103 3 28 chr15 25299878 25300241 -76080280 + AluSx SINE Alu 1 355 0 663 197 0 58 chr15 25300285 25300422 -76080099 + FLAM_C SINE Alu 2 130 -3 2102 81 3 11 chr15 25300906 25301216 -76079305 - AluY SINE Alu 0 308 1 1997 214 49 62 chr15 25301513 25302147 -76078374 - MLT1E2 LTR MaLR 0 626 1 293 289 68 55 chr15 25303529 25303764 -76076757 + MER110-int LTR ERV1 3160 3397 -3404 2136 104 16 3 chr15 25304013 25304320 -76076201 + AluSq SINE Alu 1 311 -2 324 70 0 0 chr15 25304407 25304450 -76076071 + (CA)n Simple_repeat Simple_repeat 2 44 0 2112 123 7 0 chr15 25304796 25305142 -76075379 + AluSx SINE Alu 1 348 0 2193 119 0 0 chr15 25305668 25305978 -76074543 + AluSx SINE Alu 1 310 -2 267 135 0 0 chr15 25306048 25306085 -76074436 + AluSg/x SINE Alu 142 178 -122 1297 166 11 42 chr15 25306130 25306395 -76074126 + AluJo SINE Alu 47 303 -9 388 339 49 36 chr15 25306401 25306708 -76073813 + MER110-int LTR ERV1 2426 2736 -1911 7151 195 66 37 chr15 25306776 25308348 -76072173 + MER52A LTR ERV1 136 1753 -2 189 0 0 0 chr15 25308502 25308523 -76071998 + (CAAAA)n Simple_repeat Simple_repeat 5 25 0 2115 128 32 35 chr15 25308754 25309130 -76071391 + THE1C LTR MaLR 1 375 0 265 333 9 9 chr15 25310093 25310207 -76070314 + MER70-int LTR ERVL 4552 4665 -358 1606 242 69 10 chr15 25310560 25311083 -76069438 + L1MCc LINE L1 1002 1571 -4851 1864 149 7 0 chr15 25311103 25311404 -76069117 + AluSx SINE Alu 3 305 -7 676 244 21 50 chr15 25311418 25311587 -76068934 + L1MCc LINE L1 2279 2441 -4681 1747 175 0 3 chr15 25311587 25311884 -76068637 - AluSx SINE Alu -16 296 1 676 244 21 50 chr15 25311884 25311952 -76068569 + L1MCc LINE L1 2441 2509 -4613 * 1527 188 39 36 chr15 25311930 25312314 -76068207 + L1ME1 LINE L1 6165 6549 -2241 456 141 81 101 chr15 25312314 25312413 -76068108 - LTR12 LTR ERV1 -132 582 313 1237 155 0 48 chr15 25312413 25312684 -76067837 - AluY SINE Alu -20 291 34 1502 144 60 173 chr15 25312713 25313165 -76067356 - LTR12 LTR ERV1 -313 401 1 928 207 97 94 chr15 25313228 25313415 -76067106 + L1ME1 LINE L1 6574 6759 -202 2414 115 13 31 chr15 25313415 25313797 -76066724 + THE1C LTR MaLR 1 375 0 928 207 97 94 chr15 25313797 25313991 -76066530 + L1ME1 LINE L1 6759 6956 -5 2071 112 0 3 chr15 25314546 25314842 -76065679 + AluY SINE Alu 1 295 -16 564 249 104 37 chr15 25314878 25315119 -76065402 - L1ME3A LINE L1 -99 6071 5815 274 128 0 0 chr15 25315220 25315259 -76065262 - MLT1B LTR MaLR -17 373 335 762 261 125 46 chr15 25315321 25315624 -76064897 - MLT1B LTR MaLR -63 327 1 231 146 0 24 chr15 25315627 25315668 -76064853 - L1MC4 LINE L1 -144 7898 7859 3374 222 61 13 chr15 25315734 25316840 -76063681 - L1M4 LINE L1 -2937 3707 2544 2426 211 80 88 chr15 25316973 25317720 -76062801 - L1M4 LINE L1 -4608 2038 1286 1848 128 10 10 chr15 25317720 25318017 -76062504 + AluSx SINE Alu 1 297 -15 2426 211 80 88 chr15 25318017 25318385 -76062136 - L1M4 LINE L1 -5360 1286 907 195 100 0 0 chr15 25318385 25318415 -76062106 + (TTG)n Simple_repeat Simple_repeat 2 31 0 2426 211 80 88 chr15 25318415 25318598 -76061923 - L1M4 LINE L1 -5739 907 724 1106 190 125 54 chr15 25318662 25318887 -76061634 + MER2 DNA MER2_type 2 210 -135 1880 126 17 3 chr15 25318887 25319188 -76061333 - L1MA3 LINE L1 -1 6304 6000 1106 190 125 54 chr15 25319188 25319211 -76061310 + MER2 DNA MER2_type 210 230 -115 1804 150 0 0 chr15 25319211 25319498 -76061023 - AluSx SINE Alu -25 287 1 1106 190 125 54 chr15 25319498 25319543 -76060978 + MER2 DNA MER2_type 230 317 -28 426 254 49 60 chr15 25319576 25319761 -76060760 - L1M4 LINE L1 -5877 665 483 362 297 114 10 chr15 25319865 25320067 -76060454 - L1M4 LINE L1 -6304 238 16 229 239 73 73 chr15 25320640 25320654 -76059867 - MIR SINE MIR -68 140 127 1505 121 14 68 chr15 25320654 25320746 -76059775 + AluJb SINE Alu 36 131 -181 2077 112 0 10 chr15 25320746 25321040 -76059481 - AluSq SINE Alu -22 291 1 1505 121 14 68 chr15 25321040 25321227 -76059294 + AluJb SINE Alu 131 300 -12 229 239 73 73 chr15 25321227 25321321 -76059200 - MIR SINE MIR -80 128 32 217 306 58 50 chr15 25322168 25322289 -76058232 + MIR SINE MIR 98 219 -43 1786 146 16 177 chr15 25324182 25324696 -76055825 - LTR12 LTR ERV1 -231 483 53 263 231 0 0 chr15 25324696 25324748 -76055773 - LTR30 LTR ERV1 -670 52 1 1916 96 30 46 chr15 25326152 25326455 -76054066 - AluSx SINE Alu -14 298 1 1062 223 97 19 chr15 25326517 25326836 -76053685 + MER2 DNA MER2_type 1 344 0 303 194 32 54 chr15 25326860 25326953 -76053568 - L1MC4 LINE L1 -88 7954 7864 323 353 24 12 chr15 25326982 25327234 -76053287 + L1ME LINE L1 4886 5140 -1006 228 159 0 23 chr15 25327246 25327259 -76053262 + (CATA)n Simple_repeat Simple_repeat 2 14 -30 1514 185 14 11 chr15 25327259 25327546 -76052975 + AluJb SINE Alu 1 288 -24 228 159 0 23 chr15 25327546 25327576 -76052945 + (CATA)n Simple_repeat Simple_repeat 14 44 0 1930 174 36 0 chr15 25327630 25327964 -76052557 - MER7A DNA MER2_type -1 345 2 269 299 65 90 chr15 25328123 25328477 -76052044 + L1ME LINE L1 5367 5711 -410 1006 176 150 49 chr15 25328511 25328778 -76051743 - MER66A LTR ERV1 -1 477 184 369 147 46 67 chr15 25328776 25328885 -76051636 - MER41B LTR ERV1 -269 323 191 * 393 149 75 0 chr15 25329198 25329265 -76051256 + MLT1A2 LTR MaLR 1 72 -302 472 191 0 22 chr15 25329456 25329545 -76050976 + MER72 LTR ERV1 370 456 -266 356 182 94 54 chr15 25329668 25329806 -76050715 + LTR45B LTR ERV1 351 783 0 3073 102 93 9 chr15 25329808 25330268 -76050253 + Charlie3 DNA MER1_type 2 500 -2210 * 3424 92 18 2 chr15 25330262 25330720 -76049801 + Charlie3 DNA MER1_type 2242 2706 -4 441 258 48 0 chr15 25330721 25330845 -76049676 + MLT1A2 LTR MaLR 62 191 -183 1067 79 13 26 chr15 25331520 25331672 -76048849 + AluSq/x SINE Alu 1 150 -163 532 95 0 0 chr15 25331673 25331747 -76048774 + Alu SINE Alu 222 295 -17 330 221 75 80 chr15 25333838 25334051 -76046470 + L1ME1 LINE L1 4943 5154 -992 1840 198 101 13 chr15 25334058 25334532 -76045989 + L1ME1 LINE L1 5648 6163 -3 270 81 0 0 chr15 25335651 25335688 -76044833 + (GAAAA)n Simple_repeat Simple_repeat 2 38 0 266 248 99 30 chr15 25336971 25337072 -76043449 - MER94 DNA DNA -23 111 4 642 190 224 6 chr15 25337419 25337593 -76042928 + MER20 DNA MER1_type 2 213 -6 2041 93 43 7 chr15 25338097 25338398 -76042123 + AluSx SINE Alu 1 312 0 1977 116 0 17 chr15 25338659 25338953 -76041568 - AluSx SINE Alu -23 289 1 888 194 164 64 chr15 25339061 25339391 -76041130 + MLT1A1 LTR MaLR 3 365 0 1449 180 0 4 chr15 25339608 25339847 -76040674 - MER8 DNA MER2_type 0 239 2 1151 126 0 0 chr15 25340040 25340214 -76040307 - AluSg/x SINE Alu 0 310 137 3636 44 0 0 chr15 25340314 25340749 -76039772 + L1PA5 LINE L1 5716 6150 -4 1284 94 0 0 chr15 25340752 25340922 -76039599 + AluSp SINE Alu 130 299 -14 232 236 45 0 chr15 25341376 25341465 -76039056 + MLT1J1 LTR MaLR 222 314 -132 2140 99 3 10 chr15 25342730 25343033 -76037488 - AluSx SINE Alu -11 301 1 718 279 276 17 chr15 25343068 25343598 -76036923 + L2 LINE L2 2309 2975 -339 1798 218 57 14 chr15 25343636 25344054 -76036467 - MLT1C LTR MaLR -5 462 27 2337 84 0 3 chr15 25344055 25344365 -76036156 - AluY SINE Alu -2 309 1 2275 88 0 13 chr15 25344365 25344673 -76035848 - AluSq SINE Alu -9 304 1 1492 174 33 10 chr15 25345210 25345509 -76035012 + L1MB7 LINE L1 5562 5867 -317 886 235 177 18 chr15 25345509 25345895 -76034626 + LTR48B LTR ERV1 1 409 -213 1206 133 0 10 chr15 25345919 25346114 -76034407 + AluSg/x SINE Alu 117 309 -1 2219 115 21 24 chr15 25346115 25346455 -76034066 + MSTC LTR MaLR 88 426 -2 248 250 32 97 chr15 25347485 25347609 -76032912 - MER69A DNA AcHobo -19 158 43 2809 215 82 46 chr15 25347694 25348461 -76032060 + MER21B LTR ERV1 12 806 -57 2088 122 0 3 chr15 25348860 25349163 -76031358 - AluSx SINE Alu -8 304 3 1312 185 13 21 chr15 25349457 25349695 -76030826 - LTR8 LTR ERV1 0 691 456 3511 120 78 32 chr15 25349703 25350302 -76030219 - MER41B LTR ERV1 -8 627 1 2319 121 61 93 chr15 25350302 25350771 -76029750 - LTR8 LTR ERV1 -232 459 6 2281 84 0 0 chr15 25351136 25351444 -76029077 - AluSg SINE Alu -2 308 1 191 121 15 76 chr15 25351589 25351655 -76028866 + GA-rich Low_complexity Low_complexity 2 63 0 1310 113 4 84 chr15 25352343 25352617 -76027904 + AluJb SINE Alu 41 292 -20 2283 73 3 7 chr15 25353193 25353496 -76027025 + AluSp SINE Alu 1 302 -11 874 126 0 15 chr15 25353496 25353623 -76026898 - FLAM_C SINE Alu -175 127 1 292 200 179 83 chr15 25355562 25355707 -76024814 - MLT1K LTR MaLR -111 477 319 2080 105 0 3 chr15 25356057 25356351 -76024170 + AluSx SINE Alu 1 293 -19 2207 80 7 0 chr15 25356601 25356888 -76023633 - AluSx SINE Alu -23 289 1 945 216 158 18 chr15 25357374 25357647 -76022874 - MER33 DNA MER1_type -2 322 12 2108 119 0 10 chr15 25358867 25359177 -76021344 - AluSg SINE Alu -2 308 2 648 113 66 28 chr15 25359332 25359438 -76021083 + MER46A DNA MER2_type 1 110 -126 378 184 0 0 chr15 25359439 25359515 -76021006 + MER46A DNA MER2_type 158 233 -3 404 211 59 125 chr15 25359535 25359615 -76020906 + MER104 DNA Tc2 35 102 -1796 1804 140 21 0 chr15 25359615 25359900 -76020621 - AluSx SINE Alu -21 291 1 404 211 59 125 chr15 25359900 25359971 -76020550 + MER104 DNA Tc2 102 176 -4 2066 110 13 10 chr15 25360861 25361162 -76019359 + AluSx SINE Alu 1 302 -10 363 303 68 8 chr15 25361162 25361294 -76019227 + MIR SINE MIR 24 163 -99 527 257 33 56 chr15 25362259 25362473 -76018048 + L1ME LINE L1 5366 5574 -590 956 241 111 6 chr15 25362552 25362808 -76017713 + L1M4 LINE L1 3878 4178 -1968 2170 107 7 3 chr15 25362808 25363116 -76017405 + AluSx SINE Alu 1 309 -3 956 241 111 6 chr15 25363116 25363191 -76017330 + L1M4 LINE L1 4178 4244 -1902 2041 122 0 3 chr15 25364316 25364612 -76015909 - AluSx SINE Alu -17 295 1 601 247 80 7 chr15 25364684 25364834 -76015687 - MER58B DNA MER1_type -1 340 180 263 241 115 23 chr15 25367009 25367096 -76013425 - L2 LINE L2 -1 3312 3218 2308 69 3 0 chr15 25367191 25367482 -76013039 - AluY SINE Alu -19 292 1 2319 79 0 3 chr15 25367482 25367785 -76012736 - AluY SINE Alu -9 302 1 498 202 97 24 chr15 25368581 25368705 -76011816 + MLT1E3 LTR MaLR 90 222 -402 294 130 0 0 chr15 25368916 25368962 -76011559 - MLT2F LTR ERVL -2 661 616 278 227 15 15 chr15 25369027 25369093 -76011428 + MIR3 SINE MIR 7 72 -136 23 0 0 0 chr15 25369197 25369220 -76011301 + AT_rich Low_complexity Low_complexity 1 23 0 227 257 121 7 chr15 25370409 25370547 -76009974 + MIR SINE MIR 20 179 -65 180 0 0 0 chr15 25371069 25371089 -76009432 + (A)n Simple_repeat Simple_repeat 1 20 0 2277 109 120 5 chr15 25374133 25374517 -76006004 + MSTA LTR MaLR 1 428 0 9476 138 11 42 chr15 25374517 25376148 -76004373 + MSTA-int LTR MaLR 1 1580 0 2078 137 129 5 chr15 25376148 25376529 -76003992 + MSTA LTR MaLR 1 428 0 181 0 0 0 chr15 25379091 25379111 -76001410 + (TTTA)n Simple_repeat Simple_repeat 3 24 0 1998 113 0 0 chr15 25379111 25379377 -76001144 - AluSx SINE Alu -30 282 17 35 54 0 0 chr15 25379704 25379760 -76000761 + AT_rich Low_complexity Low_complexity 1 56 0 2321 66 7 7 chr15 25379996 25380299 -76000222 - AluY SINE Alu -8 303 1 1901 165 0 13 chr15 25380916 25381232 -75999289 + AluSq SINE Alu 2 313 0 23 0 0 0 chr15 25381410 25381433 -75999088 + AT_rich Low_complexity Low_complexity 1 23 0 2267 80 37 10 chr15 25381703 25382003 -75998518 - AluSp SINE Alu -5 308 1 1849 160 0 17 chr15 25382756 25383082 -75997439 + AluSx SINE Alu 1 321 0 234 218 13 51 chr15 25383770 25383848 -75996673 - MER20 DNA MER1_type 0 219 145 259 159 0 0 chr15 25383974 25384018 -75996503 + MER96B DNA MER1_type? 191 234 -183 985 147 0 7 chr15 25384849 25385028 -75995493 + AluSg/x SINE Alu 132 309 0 2417 63 0 13 chr15 25385237 25385538 -75994983 + AluY SINE Alu 1 297 -14 1565 188 43 0 chr15 25386001 25386120 -75994401 + AluJo SINE Alu 3 115 -197 234 0 0 0 chr15 25386120 25386146 -75994375 + (TAA)n Simple_repeat Simple_repeat 2 27 0 1565 188 43 0 chr15 25386146 25386308 -75994213 + AluJo SINE Alu 115 296 -16 234 250 42 0 chr15 25387815 25387887 -75992634 + MIR SINE MIR 117 191 -71 444 213 213 7 chr15 25389161 25389316 -75991205 - MIR SINE MIR 0 262 76 687 188 43 120 chr15 25389373 25389607 -75990914 + MER20 DNA MER1_type 1 216 -3 2360 91 0 7 chr15 25390242 25390539 -75989982 - AluSx SINE Alu -17 295 1 1903 172 13 0 chr15 25391060 25391368 -75989153 + AluJb SINE Alu 1 312 0 186 43 0 0 chr15 25394104 25394127 -75986394 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1510 186 0 66 chr15 25394498 25394831 -75985690 + AluJo SINE Alu 1 311 -1 2476 56 0 7 chr15 25395197 25395499 -75985022 - AluY SINE Alu -11 300 1 1297 60 72 0 chr15 25395744 25395910 -75984611 - AluY SINE Alu -14 297 120 1034 158 82 0 chr15 25396038 25396234 -75984287 + MER20 DNA MER1_type 8 219 0 1182 168 40 128 chr15 25397169 25397490 -75983031 + AluJo SINE Alu 1 293 -9 447 272 106 57 chr15 25398048 25398413 -75982108 + L1ME LINE L1 4637 5025 -1121 1612 190 7 23 chr15 25398675 25398975 -75981546 + AluJo SINE Alu 4 298 -14 269 308 111 31 chr15 25398995 25399127 -75981394 + L1ME LINE L1 5310 5430 -691 2266 103 0 0 chr15 25399127 25399418 -75981103 + AluSc SINE Alu 1 291 -18 269 308 111 31 chr15 25399418 25399700 -75980821 + L1ME LINE L1 5430 5757 -364 245 280 116 37 chr15 25400060 25400249 -75980272 + L1M4 LINE L1 3661 3864 -2282 35 41 0 0 chr15 25401148 25401197 -75979324 + AT_rich Low_complexity Low_complexity 1 49 0 1048 210 113 0 chr15 25401758 25402049 -75978472 - MER33 DNA MER1_type 0 324 1 1909 149 13 7 chr15 25402244 25402552 -75977969 - AluJb SINE Alu -2 310 1 336 48 0 0 chr15 25402602 25402644 -75977877 + (TG)n Simple_repeat Simple_repeat 1 42 0 725 198 23 109 chr15 25403351 25403520 -75977001 + LTR41 LTR ERVL 482 615 -158 2133 114 3 16 chr15 25403520 25403689 -75976832 - AluSx SINE Alu -10 302 137 2304 65 14 3 chr15 25403689 25403982 -75976539 - AluY SINE Alu -15 296 1 2133 114 3 16 chr15 25403982 25404118 -75976403 - AluSx SINE Alu -175 137 1 725 198 23 109 chr15 25404118 25404251 -75976270 + LTR41 LTR ERVL 615 758 -15 965 190 0 22 chr15 25405596 25405775 -75974746 - AluJb SINE Alu -4 308 134 2335 99 0 3 chr15 25405781 25406083 -75974438 - AluSx SINE Alu -11 301 1 362 312 163 47 chr15 25406502 25406864 -75973657 + L2 LINE L2 2824 3227 -86 2548 59 0 3 chr15 25406881 25407188 -75973333 + AluY SINE Alu 1 306 -5 3378 89 35 8 chr15 25407705 25408213 -75972308 + L1PA14 LINE L1 5640 6161 0 1152 143 107 14 chr15 25408321 25408537 -75971984 - MER46A DNA MER2_type 0 236 1 1622 140 104 3 chr15 25408696 25409003 -75971518 + MER7A DNA MER2_type 11 346 0 244 231 123 0 chr15 25410159 25410224 -75970297 - MER58A DNA MER1_type -32 75 3 292 271 146 0 chr15 25410745 25410841 -75969680 - MIR SINE MIR -125 137 28 2147 121 39 100 chr15 25411498 25411960 -75968561 + Tigger2a DNA MER2_type 1 434 0 4587 123 36 10 chr15 25413010 25413789 -75966732 - L1MA9 LINE L1 -2 6310 5512 2275 101 0 3 chr15 25414058 25414356 -75966165 - AluSx SINE Alu -15 297 1 693 183 111 7 chr15 25414506 25414659 -75965862 + MER58A DNA MER1_type 47 215 -9 472 249 30 20 chr15 25414898 25415099 -75965422 - L1MA9 LINE L1 -817 5329 5127 * 4718 223 73 54 chr15 25415094 25415232 -75965289 - L1M4 LINE L1 -869 5277 5143 2060 142 0 3 chr15 25415232 25415534 -75964987 + AluSx SINE Alu 1 301 -11 4718 223 73 54 chr15 25415534 25417218 -75963303 - L1M4 LINE L1 -1003 5143 3493 207 0 0 0 chr15 25417218 25417241 -75963280 + (TTTTG)n Simple_repeat Simple_repeat 2 24 0 1970 134 24 0 chr15 25417250 25417540 -75962981 - AluSx SINE Alu -15 297 1 4718 223 73 54 chr15 25417540 25417901 -75962620 - L1M4 LINE L1 -2660 3486 3041 7898 158 59 34 chr15 25418574 25418869 -75961652 + L1MA3 LINE L1 3505 3791 -2514 2295 130 80 8 chr15 25418869 25419268 -75961253 + MSTA LTR MaLR 1 428 0 7898 158 59 34 chr15 25419268 25419812 -75960709 + L1MA3 LINE L1 3791 4320 -1985 180 0 0 0 chr15 25419812 25419832 -75960689 + (TAAAA)n Simple_repeat Simple_repeat 3 22 0 7898 158 59 34 chr15 25419832 25420989 -75959532 + L1MA3 LINE L1 4320 5447 -858 2025 89 96 0 chr15 25420989 25421271 -75959250 + AluY SINE Alu 1 309 -2 7898 158 59 34 chr15 25421271 25421354 -75959167 + L1MA3 LINE L1 5447 5526 -779 2047 115 10 7 chr15 25421354 25421649 -75958872 + AluSx SINE Alu 1 296 -16 7898 158 59 34 chr15 25421649 25422282 -75958239 + L1MA3 LINE L1 5526 6305 0 716 179 33 26 chr15 25422458 25422609 -75957912 - MER58B DNA MER1_type -3 338 187 203 331 16 33 chr15 25422689 25422810 -75957711 - MER5A DNA MER1_type -68 121 3 290 244 25 101 chr15 25423143 25423262 -75957259 - L2 LINE L2 0 3313 3204 528 195 70 38 chr15 25423476 25423661 -75956860 - MER33 DNA MER1_type 0 363 173 258 264 28 0 chr15 25423682 25423754 -75956767 - MER33 DNA MER1_type -241 83 10 1278 204 23 3 chr15 25424092 25424396 -75956125 + L1MB8 LINE L1 4867 5176 -970 677 195 0 23 chr15 25426247 25426375 -75954146 - FLAM_A SINE Alu -8 125 1 2194 108 7 7 chr15 25426961 25427258 -75953263 + AluSg SINE Alu 1 297 -13 280 252 148 9 chr15 25427499 25427614 -75952907 - L2 LINE L2 -1 3312 3182 639 311 153 53 chr15 25427971 25428787 -75951734 - L2 LINE L2 -666 2648 1751 1503 203 0 7 chr15 25429081 25429362 -75951159 + AluJb SINE Alu 1 279 -33 246 32 0 0 chr15 25429362 25429393 -75951128 + (CAA)n Simple_repeat Simple_repeat 2 32 0 251 253 92 23 chr15 25432835 25432922 -75947599 + L1MB8 LINE L1 5562 5654 -467 4653 122 98 61 chr15 25433076 25433637 -75946884 + Tigger3b DNA MER2_type 1 540 -2488 1673 153 51 0 chr15 25433637 25433912 -75946609 + AluSx SINE Alu 1 289 -23 1690 68 135 41 chr15 25433916 25434182 -75946339 + AluY SINE Alu 21 311 0 4653 122 98 61 chr15 25434182 25434641 -75945880 + Tigger3b DNA MER2_type 542 1064 -167 1567 179 57 3 chr15 25434645 25434946 -75945575 - MER7A DNA MER2_type -31 315 1 2498 71 0 0 chr15 25434996 25435293 -75945228 + AluY SINE Alu 1 297 -14 508 264 110 72 chr15 25435869 25436241 -75944280 - MER113 DNA MER1_type? -1 520 123 1904 164 0 10 chr15 25436241 25436539 -75943982 - AluJo SINE Alu -17 295 1 508 264 110 72 chr15 25436539 25436667 -75943854 - MER113 DNA MER1_type? -398 123 1 1561 196 66 17 chr15 25437828 25438236 -75942285 + L1MB8 LINE L1 5741 6168 -10 3815 188 21 7 chr15 25438374 25439097 -75941424 + MER44D DNA MER2_type 1 605 0 390 316 70 41 chr15 25439244 25439801 -75940720 + L1M4 LINE L1 3370 3942 -2204 3195 244 58 24 chr15 25439854 25440918 -75939603 - Charlie1a DNA MER1_type -349 1106 7 22 0 0 0 chr15 25440953 25440975 -75939546 + AT_rich Low_complexity Low_complexity 1 22 0 722 208 19 42 chr15 25441112 25441328 -75939193 + L1MC/D LINE L1 5533 5743 -2065 303 293 46 69 chr15 25441687 25441861 -75938660 + MER5B DNA MER1_type 7 176 -2 231 377 9 9 chr15 25442201 25442315 -75938206 + L2 LINE L2 2948 3061 -211 1730 244 17 28 chr15 25442541 25443013 -75937508 + LTR31 LTR ERV1 115 581 -38 243 0 0 0 chr15 25443414 25443441 -75937080 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 3388 144 17 6 chr15 25443535 25444056 -75936465 - MER1A DNA MER1_type 0 527 1 6078 174 32 8 chr15 25444377 25445673 -75934848 + L1PA13 LINE L1 3049 4375 -1771 4763 110 80 25 chr15 25445674 25446463 -75934058 + L1PA13 LINE L1 4646 5390 -773 2273 113 0 0 chr15 25446463 25446763 -75933758 + AluSp SINE Alu 1 300 -13 4763 110 80 25 chr15 25446763 25447430 -75933091 + L1PA13 LINE L1 5390 6152 -11 2136 104 13 13 chr15 25447773 25448071 -75932450 - AluSq SINE Alu -15 298 1 372 284 183 41 chr15 25448071 25448339 -75932182 + HAL1b LINE L1 493 798 -550 514 204 120 7 chr15 25448799 25448941 -75931580 + MER58B DNA MER1_type 181 338 -3 236 319 29 0 chr15 25449269 25449338 -75931183 - MIR3 SINE MIR -10 198 128 * 255 298 220 21 chr15 25449334 25449475 -75931046 + MIR3 SINE MIR 36 204 -4 1708 168 14 20 chr15 25449976 25450268 -75930253 - AluJo SINE Alu -17 295 6 469 121 61 0 chr15 25450581 25450680 -75929841 - L1MB8 LINE L1 -3 6175 6071 1032 221 8 0 chr15 25450685 25450934 -75929587 + L1M4 LINE L1 4907 5157 -989 * 3323 180 78 4 chr15 25450931 25451781 -75928740 - L1MB8 LINE L1 -115 6063 5153 2333 211 104 42 chr15 25451943 25452107 -75928414 + L1ME1 LINE L1 5287 5439 -727 1956 115 11 0 chr15 25452107 25452377 -75928144 - AluSx SINE Alu -38 274 2 2333 211 104 42 chr15 25452377 25452417 -75928104 + L1ME1 LINE L1 5439 5475 -691 1248 171 54 0 chr15 25452417 25452639 -75927882 - MER46A DNA MER2_type 0 236 3 2333 211 104 42 chr15 25452639 25453262 -75927259 + L1ME1 LINE L1 5475 6166 0 21 57 0 0 chr15 25453270 25453305 -75927216 + AT_rich Low_complexity Low_complexity 1 35 0 2412 67 0 7 chr15 25453524 25453822 -75926699 - AluY SINE Alu -15 296 1 21 0 0 0 chr15 25453831 25453852 -75926669 + AT_rich Low_complexity Low_complexity 1 21 0 226 359 31 31 chr15 25454133 25454261 -75926260 - MIR SINE MIR -119 143 16 2712 7 0 0 chr15 25455571 25455868 -75924653 - AluYa5 SINE Alu -14 297 1 1353 67 130 24 chr15 25455890 25456098 -75924423 + MER30 DNA MER1_type 1 230 0 1673 139 139 9 chr15 25457368 25457692 -75922829 + MER47A DNA MER2_type 1 366 0 249 303 0 50 chr15 25459048 25459147 -75921374 + MIR3 SINE MIR 115 208 0 207 0 0 0 chr15 25459637 25459660 -75920861 + (TTCA)n Simple_repeat Simple_repeat 1 23 0 290 110 82 55 chr15 25459760 25459833 -75920688 - MADE1 DNA Mariner 0 80 6 184 306 122 20 chr15 25460701 25460799 -75919722 - L2 LINE L2 -1884 1430 1323 195 171 49 49 chr15 25460805 25460846 -75919675 - L2 LINE L2 -73 3240 3200 500 204 12 126 chr15 25461595 25461850 -75918671 + L1MC4a LINE L1 6044 6269 -1539 24 67 0 0 chr15 25461863 25461908 -75918613 + AT_rich Low_complexity Low_complexity 1 45 0 2149 129 7 0 chr15 25462093 25462396 -75918125 + AluSx SINE Alu 1 305 -7 435 266 38 22 chr15 25462396 25462580 -75917941 + L1ME3A LINE L1 5939 6125 -45 1074 196 28 40 chr15 25462728 25463055 -75917466 + L1MC5 LINE L1 7003 7325 -636 550 173 4 9 chr15 25463055 25463165 -75917356 + MER33 DNA MER1_type 1 100 -88 447 172 69 28 chr15 25463223 25463368 -75917153 + MER33 DNA MER1_type 88 238 -86 239 224 86 9 chr15 25463420 25463536 -75916985 + L1MC5 LINE L1 7344 7468 -493 2132 105 3 7 chr15 25463671 25463967 -75916554 + AluSq SINE Alu 1 295 -18 672 182 0 0 chr15 25464138 25464259 -75916262 - MER46A DNA MER2_type -94 142 22 474 246 41 35 chr15 25464281 25464452 -75916069 + L1MC5 LINE L1 7753 7924 -37 194 293 24 30 chr15 25464837 25464951 -75915570 - L2 LINE L2 -248 3024 2914 426 317 55 35 chr15 25464956 25465155 -75915366 - L2 LINE L2 -2 3311 3109 273 294 66 116 chr15 25465201 25465579 -75914942 - L2 LINE L2 -411 2903 2545 288 0 0 0 chr15 25465967 25465999 -75914522 + (TGAA)n Simple_repeat Simple_repeat 3 34 0 183 80 0 0 chr15 25466030 25466055 -75914466 + (TAAA)n Simple_repeat Simple_repeat 4 28 0 242 215 75 47 chr15 25466357 25466464 -75914057 + L1ME3A LINE L1 6061 6170 0 411 268 87 22 chr15 25466488 25466626 -75913895 + Charlie8 DNA MER1_type 108 254 -2163 489 236 108 32 chr15 25466780 25466937 -75913584 + MIR SINE MIR 78 246 -16 468 207 61 61 chr15 25467554 25467718 -75912803 + L1ME3A LINE L1 5787 5950 -220 448 266 169 0 chr15 25467847 25468001 -75912520 + L2 LINE L2 3127 3306 -7 1802 132 0 59 chr15 25470120 25470424 -75910097 - AluSx SINE Alu -13 299 14 6431 67 5 46 chr15 25470897 25472131 -75908390 + L1PA8 LINE L1 4970 6166 -6 1878 101 36 42 chr15 25472607 25472913 -75907608 - AluSg SINE Alu -6 304 1 1888 111 0 4 chr15 25472916 25473177 -75907344 - AluSx SINE Alu -3 309 50 504 257 138 13 chr15 25473433 25473585 -75906936 + MIR SINE MIR 66 236 -26 266 314 101 6 chr15 25473948 25474178 -75906343 + L1ME LINE L1 5561 5647 -474 184 214 48 0 chr15 25474321 25474363 -75906158 + MIR SINE MIR 198 241 -21 512 312 136 55 chr15 25475695 25476619 -75903902 + L1M2 LINE L1 388 1295 -5554 247 131 0 33 chr15 25476620 25476681 -75903840 + (CGGGG)n Simple_repeat Simple_repeat 1 59 0 1540 94 5 0 chr15 25477978 25478179 -75902342 + AluSq SINE Alu 84 285 -28 324 0 0 0 chr15 25478179 25478215 -75902306 + (CAT)n Simple_repeat Simple_repeat 2 37 0 564 128 53 0 chr15 25478215 25478309 -75902212 + FLAM_C SINE Alu 31 129 -14 22 35 0 0 chr15 25478672 25478701 -75901820 + AT_rich Low_complexity Low_complexity 1 29 0 304 200 0 0 chr15 25479771 25479841 -75900680 + L1MB3 LINE L1 6113 6182 -1 624 250 58 16 chr15 25480497 25480685 -75899836 + MER45C DNA AcHobo 17 212 -741 378 239 110 9 chr15 25480888 25480997 -75899524 + MER45C DNA AcHobo 470 589 -364 1359 168 72 0 chr15 25481282 25481544 -75898977 + MER45B DNA AcHobo 713 993 -47 331 294 155 46 chr15 25481983 25482381 -75898140 - L1MC4a LINE L1 -297 5824 5433 2114 118 3 0 chr15 25482469 25482638 -75897883 - AluSx SINE Alu -14 298 126 180 0 0 0 chr15 25482638 25482658 -75897863 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 2114 118 3 0 chr15 25482658 25482785 -75897736 - AluSx SINE Alu -186 126 1 775 171 105 7 chr15 25482838 25482990 -75897531 - L1MD3 LINE L1 -15 7980 7814 195 42 0 0 chr15 25483362 25483386 -75897135 + (A)n Simple_repeat Simple_repeat 1 24 0 21 57 0 0 chr15 25483737 25483772 -75896749 + AT_rich Low_complexity Low_complexity 1 35 0 30 45 0 0 chr15 25484042 25484086 -75896435 + AT_rich Low_complexity Low_complexity 1 44 0 21 82 0 0 chr15 25484202 25484251 -75896270 + AT_rich Low_complexity Low_complexity 1 49 0 22 0 0 0 chr15 25484412 25484434 -75896087 + AT_rich Low_complexity Low_complexity 1 22 0 1072 238 142 114 chr15 25484446 25485682 -75894839 + L1MC5 LINE L1 6637 7906 -55 665 286 172 29 chr15 25485760 25486236 -75894285 + MLT1H LTR MaLR 6 549 0 1981 146 10 3 chr15 25487132 25487427 -75893094 - AluSx SINE Alu -15 297 1 21 57 0 0 chr15 25487574 25487609 -75892912 + AT_rich Low_complexity Low_complexity 1 35 0 2493 50 7 0 chr15 25487609 25487906 -75892615 - AluY SINE Alu -12 299 1 2100 106 7 7 chr15 25487952 25488245 -75892276 - AluSg1 SINE Alu -16 293 1 992 104 0 7 chr15 25489248 25489392 -75891129 + FRAM SINE Alu 20 162 -14 318 67 0 0 chr15 25489612 25489657 -75890864 + (GA)n Simple_repeat Simple_repeat 1 45 0 2251 75 14 0 chr15 25490000 25490294 -75890227 - AluY SINE Alu -13 298 1 1250 176 42 139 chr15 25490364 25490768 -75889753 + MLT1A1 LTR MaLR 1 365 0 2045 94 4 7 chr15 25491028 25491303 -75889218 + AluSp SINE Alu 29 302 -11 4261 204 62 44 chr15 25491822 25491866 -75888655 - L1MD2 LINE L1 -9 6350 6308 2094 158 0 0 chr15 25491866 25492170 -75888351 + AluSx SINE Alu 1 304 -8 4261 204 62 44 chr15 25492170 25492328 -75888193 - L1MD2 LINE L1 -51 6308 6154 251 27 0 27 chr15 25492328 25492365 -75888156 + (TG)n Simple_repeat Simple_repeat 1 36 0 4261 204 62 44 chr15 25492365 25492716 -75887805 - L1MD2 LINE L1 -205 6154 5811 2552 62 0 0 chr15 25492716 25493021 -75887500 - AluY SINE Alu -6 305 1 4261 204 62 44 chr15 25493021 25493083 -75887438 - L1MD2 LINE L1 -548 5811 5752 1728 179 13 19 chr15 25493083 25493396 -75887125 + AluJo SINE Alu 1 311 -1 4261 204 62 44 chr15 25493396 25494085 -75886436 - L1MD2 LINE L1 -607 5752 5022 231 337 33 0 chr15 25494479 25494571 -75885950 - L2 LINE L2 -40 3273 3179 238 113 19 38 chr15 25495423 25495476 -75885045 + CT-rich Low_complexity Low_complexity 1 52 0 3636 147 21 20 chr15 25495809 25496413 -75884108 - MER6A DNA MER2_type 0 605 1 2522 70 3 3 chr15 25496898 25497211 -75883310 - AluSp SINE Alu 0 313 1 518 259 84 93 chr15 25497303 25497732 -75882789 - L2 LINE L2 -70 3243 2819 340 145 4 49 chr15 25497766 25497821 -75882700 - Alu SINE Alu -1 301 259 1834 107 52 0 chr15 25497821 25498091 -75882430 - AluSx SINE Alu -28 284 1 340 145 4 49 chr15 25498091 25498111 -75882410 - Alu SINE Alu -43 259 240 1838 275 104 14 chr15 25498118 25498817 -75881704 - L2 LINE L2 -628 2686 1925 1976 99 10 7 chr15 25499247 25499540 -75880981 + AluSc SINE Alu 1 294 -15 2298 70 0 3 chr15 25500365 25500675 -75879846 + AluY SINE Alu 1 309 0 216 205 0 0 chr15 25500746 25500785 -75879736 - L2 LINE L2 -10 3303 3265 1348 145 9 14 chr15 25500813 25501034 -75879487 - AluJb SINE Alu -3 309 90 2128 201 37 80 chr15 25501036 25501225 -75879296 - L1M4 LINE L1 -2937 3209 3014 2296 97 0 0 chr15 25501225 25501525 -75878996 + AluY SINE Alu 1 300 -11 2128 201 37 80 chr15 25501525 25502140 -75878381 - L1M4 LINE L1 -3132 3014 2439 2364 91 3 0 chr15 25502301 25502599 -75877922 + AluSc SINE Alu 1 299 -10 269 142 124 159 chr15 25503028 25503141 -75877380 + MLT1F1 LTR MaLR 1 109 -458 30 27 0 0 chr15 25503141 25503178 -75877343 + AT_rich Low_complexity Low_complexity 1 37 0 1944 134 10 33 chr15 25503178 25503483 -75877038 + AluSx SINE Alu 1 298 -14 752 179 27 0 chr15 25503483 25503595 -75876926 - AluJo/FLAM SINE Alu -196 116 2 1439 212 42 111 chr15 25503597 25504047 -75876474 + MLT1F1 LTR MaLR 94 507 -60 2313 85 7 19 chr15 25504047 25504354 -75876167 - AluSg SINE Alu -7 303 1 1439 212 42 111 chr15 25504354 25504408 -75876113 + MLT1F1 LTR MaLR 507 563 -4 799 172 0 22 chr15 25504420 25504554 -75875967 + FLAM_C SINE Alu 2 132 -11 915 249 75 31 chr15 25504564 25504575 -75875946 + L1MD2 LINE L1 3151 3160 -2986 2075 154 0 0 chr15 25504575 25504880 -75875641 + AluSx SINE Alu 1 305 -7 915 249 75 31 chr15 25504880 25505281 -75875240 + L1MD2 LINE L1 3160 3581 -2565 * 4627 206 53 31 chr15 25505270 25506347 -75874174 + L1MD2 LINE L1 4588 5711 -648 2301 81 20 0 chr15 25506347 25506644 -75873877 + AluSp SINE Alu 1 303 -10 4627 206 53 31 chr15 25506644 25507278 -75873243 + L1MD2 LINE L1 5711 6329 -30 1014 229 86 67 chr15 25507975 25508421 -75872100 + MLT1C LTR MaLR 1 458 -9 746 107 14 29 chr15 25509120 25509260 -75871261 + L1MA4 LINE L1 6160 6297 -3 2164 108 10 0 chr15 25509294 25509589 -75870932 + AluSx SINE Alu 1 298 -14 2145 139 25 79 chr15 25509698 25509863 -75870658 + L1MB7 LINE L1 5663 5835 -349 618 138 165 18 chr15 25509863 25509972 -75870549 + FLAM_A SINE Alu 1 125 -8 2145 139 25 79 chr15 25509972 25510238 -75870283 + L1MB7 LINE L1 5835 6071 -113 462 216 11 0 chr15 25510321 25510409 -75870112 - MER2 DNA MER2_type 0 345 257 994 69 0 0 chr15 25510409 25510525 -75869996 + AluY SINE Alu 1 116 -195 522 92 0 0 chr15 25510525 25510590 -75869931 + AluJ/FRAM SINE Alu 233 297 -15 1658 165 4 0 chr15 25510592 25510853 -75869668 - MER2 DNA MER2_type -82 263 2 361 78 20 0 chr15 25511049 25511100 -75869421 - MER75B DNA T2_type 0 243 192 2246 100 0 3 chr15 25511490 25511780 -75868741 - AluSq SINE Alu -24 289 1 1840 177 0 7 chr15 25511836 25512136 -75868385 + AluJb SINE Alu 1 298 -14 338 264 0 0 chr15 25512160 25512247 -75868274 - L2 LINE L2 -4 3268 3182 1772 139 7 17 chr15 25512266 25512554 -75867967 - AluJb SINE Alu -17 295 11 703 191 22 15 chr15 25512573 25512709 -75867812 - AluJb SINE Alu -174 138 2 1513 176 3 30 chr15 25514145 25514440 -75866081 - L1MB7 LINE L1 -185 5999 5713 726 212 15 0 chr15 25514443 25514580 -75865941 + Tigger1 DNA MER2_type 1 139 -2279 * 1122 154 32 41 chr15 25514576 25514797 -75865724 + Tigger1 DNA MER2_type 2200 2418 0 2299 158 21 76 chr15 25514797 25515115 -75865406 - L1MB7 LINE L1 -466 5712 5378 997 72 29 22 chr15 25515115 25515253 -75865268 + MER85 DNA T2_type 1 139 0 2299 158 21 76 chr15 25515253 25515811 -75864710 - L1MB7 LINE L1 -800 5378 4903 298 202 0 0 chr15 25515836 25515892 -75864629 - MIR3 SINE MIR -50 158 102 237 65 0 0 chr15 25516352 25516383 -75864138 + (T)n Simple_repeat Simple_repeat 1 31 0 2128 102 0 3 chr15 25516540 25516844 -75863677 + AluSx SINE Alu 3 305 0 282 220 0 0 chr15 25516971 25517030 -75863491 + Charlie8 DNA MER1_type 33 91 -2326 297 140 20 0 chr15 25517114 25517164 -75863357 + Charlie8 DNA MER1_type 1363 1413 -1004 1458 92 0 83 chr15 25517637 25517866 -75862655 + AluSg SINE Alu 1 210 -100 309 323 21 0 chr15 25517933 25518026 -75862495 + L2 LINE L2 3153 3247 -25 185 262 82 16 chr15 25519440 25519501 -75861020 - L2 LINE L2 -41 3231 3167 1427 180 20 56 chr15 25521151 25521299 -75859222 + AluJo SINE Alu 1 134 -178 1988 159 0 7 chr15 25521299 25521601 -75858920 + AluJo SINE Alu 1 300 -12 1427 180 20 56 chr15 25521601 25521757 -75858764 + AluJo SINE Alu 134 294 -18 214 317 61 0 chr15 25522037 25522119 -75858402 + L2 LINE L2 3185 3271 -1 309 277 31 23 chr15 25522582 25522712 -75857809 + L1M4 LINE L1 4904 5034 -1112 2200 76 0 96 chr15 25523321 25523665 -75856856 - AluSx SINE Alu -1 311 1 28 29 0 0 chr15 25528197 25528232 -75852289 + AT_rich Low_complexity Low_complexity 1 35 0 2348 96 3 0 chr15 25529087 25529389 -75851132 - AluSg SINE Alu -7 303 1 641 220 100 13 chr15 25529489 25529639 -75850882 - MER3 DNA MER1_type 0 209 47 1551 83 69 14 chr15 25529669 25529763 -75850758 - MER30 DNA MER1_type -1 229 142 2379 94 0 3 chr15 25529763 25530060 -75850461 + AluSx SINE Alu 1 296 -16 1551 83 69 14 chr15 25530060 25530182 -75850339 - MER30 DNA MER1_type -88 142 1 1782 159 20 17 chr15 25530744 25531046 -75849475 - AluJb SINE Alu -9 303 1 2238 76 7 33 chr15 25531053 25531492 -75849029 - AluSg SINE Alu 0 431 1 208 0 0 0 chr15 25531569 25531592 -75848929 + (TTTG)n Simple_repeat Simple_repeat 2 124 0 2247 67 7 3 chr15 25531592 25531875 -75848646 - AluY SINE Alu -1 306 1 2416 74 0 6 chr15 25532368 25532679 -75847842 + AluSc SINE Alu 1 309 0 1342 174 5 5 chr15 25533234 25533453 -75847068 - AluSg/x SINE Alu -9 301 83 6183 142 25 22 chr15 25533800 25534956 -75845565 - L1MA10 LINE L1 -4 6330 5171 259 306 97 15 chr15 25534983 25535117 -75845404 + MIR SINE MIR 10 154 -108 222 62 0 0 chr15 25535460 25535492 -75845029 + (TA)n Simple_repeat Simple_repeat 2 33 0 189 0 0 0 chr15 25537250 25537271 -75843250 + (GAAAA)n Simple_repeat Simple_repeat 5 25 0 22 0 0 0 chr15 25537344 25537366 -75843155 + AT_rich Low_complexity Low_complexity 1 22 0 205 236 164 73 chr15 25537759 25537789 -75842732 - MIR3 SINE MIR -25 183 157 464 321 38 11 chr15 25537789 25537973 -75842548 + MER5A DNA MER1_type 1 189 0 205 236 164 73 chr15 25537973 25538052 -75842469 - MIR3 SINE MIR -51 157 64 27 62 0 0 chr15 25539800 25539848 -75840673 + AT_rich Low_complexity Low_complexity 1 48 0 878 163 14 0 chr15 25539992 25540139 -75840382 + FAM SINE Alu 21 169 -16 399 296 208 26 chr15 25540154 25540606 -75839915 + L1ME LINE L1 4310 4843 -1303 365 79 40 13 chr15 25540768 25540838 -75839683 + (TA)n Simple_repeat Simple_repeat 2 74 0 2197 101 7 3 chr15 25540838 25541126 -75839395 - AluSq SINE Alu -24 289 1 643 209 71 75 chr15 25541351 25541618 -75838903 + L1ME LINE L1 5523 5784 -337 39 60 0 0 chr15 25541695 25541762 -75838759 + AT_rich Low_complexity Low_complexity 1 67 0 196 132 0 57 chr15 25541779 25541832 -75838689 + (TATATG)n Simple_repeat Simple_repeat 5 54 0 211 182 0 0 chr15 25541870 25541903 -75838618 + (CA)n Simple_repeat Simple_repeat 2 34 0 268 309 36 0 chr15 25543136 25543220 -75837301 + LTR67 LTR ERVL 107 193 -364 193 95 0 143 chr15 25544800 25544842 -75835679 + L3b LINE CR1 1540 1575 -8 16546 121 22 11 chr15 25544982 25547373 -75833148 + Tigger1 DNA MER2_type 1 2417 -1 2043 146 0 0 chr15 25547701 25547989 -75832532 + AluSx SINE Alu 1 288 -24 286 125 21 0 chr15 25548040 25548088 -75832433 - MLT1A2 LTR MaLR 0 374 326 5302 198 97 41 chr15 25548089 25549316 -75831205 - MLT1A1-int LTR MaLR -439 1296 1 1808 179 36 30 chr15 25549316 25549655 -75830866 - MLT1A1 LTR MaLR 0 365 29 2352 141 28 19 chr15 25549655 25550016 -75830505 + THE1B LTR MaLR 1 364 0 12594 84 9 9 chr15 25550016 25551597 -75828924 + THE1B-int LTR MaLR 1 1580 0 2437 137 28 14 chr15 25551597 25551956 -75828565 + THE1B LTR MaLR 1 364 0 1808 179 36 30 chr15 25551956 25551977 -75828544 - MLT1A1 LTR MaLR -335 30 1 477 227 100 47 chr15 25552118 25552268 -75828253 - MER46A DNA MER2_type -78 158 1 * 1107 181 60 9 chr15 25552134 25552350 -75828171 + MER46A DNA MER2_type 1 227 -9 205 306 88 31 chr15 25553034 25553194 -75827327 + MIR SINE MIR 20 188 -74 1032 254 155 32 chr15 25553368 25554149 -75826372 - L2 LINE L2 0 3313 2434 291 316 45 82 chr15 25554278 25554522 -75825999 - L2 LINE L2 -13 3259 3025 2346 94 3 0 chr15 25555063 25555361 -75825160 + AluSx SINE Alu 1 299 -13 1687 100 0 0 chr15 25556277 25556497 -75824024 + AluSc SINE Alu 1 220 -89 2535 48 0 0 chr15 25556975 25557267 -75823254 - AluY SINE Alu -19 292 1 671 315 133 0 chr15 25557677 25557979 -75822542 - L2 LINE L2 -509 2805 2464 266 244 13 32 chr15 25558054 25558174 -75822347 + L1ME4a LINE L1 5325 5429 -737 1713 180 103 28 chr15 25558220 25558648 -75821873 + MLT1C LTR MaLR 6 465 -2 785 306 68 16 chr15 25558651 25558958 -75821563 + L1ME4a LINE L1 5484 5806 -315 4414 140 32 29 chr15 25558961 25559712 -75820809 + L1MC1 LINE L1 5570 6322 -11 2165 100 21 0 chr15 25559714 25559993 -75820528 + AluSx SINE Alu 1 285 -27 34 42 0 0 chr15 25560017 25560065 -75820456 + AT_rich Low_complexity Low_complexity 1 48 0 829 100 0 0 chr15 25560098 25560208 -75820313 - AluSg/x SINE Alu -8 302 193 490 189 5 55 chr15 25560324 25560464 -75820057 + L1MC4 LINE L1 7845 8042 0 2376 87 0 0 chr15 25560479 25560777 -75819744 + AluY SINE Alu 1 298 -13 351 258 132 13 chr15 25560791 25560950 -75819571 + L1ME4a LINE L1 5939 6116 -5 471 248 48 28 chr15 25561301 25561446 -75819075 + HAL1 LINE L1 1047 1194 -1313 1122 196 97 33 chr15 25561499 25561830 -75818691 + HAL1 LINE L1 1296 1647 -860 491 261 200 74 chr15 25561851 25562088 -75818433 + MLT1L LTR MaLR 5 211 -404 2148 117 0 19 chr15 25562088 25562224 -75818297 + AluSx SINE Alu 1 138 -174 2491 67 0 10 chr15 25562224 25562538 -75817983 + AluY SINE Alu 1 311 0 2148 117 0 19 chr15 25562538 25562709 -75817812 + AluSx SINE Alu 138 302 -10 491 261 200 74 chr15 25562709 25562930 -75817591 + MLT1L LTR MaLR 211 521 -94 2370 125 149 8 chr15 25564738 25565113 -75815408 - MSTA LTR MaLR 0 428 1 1768 181 54 25 chr15 25565316 25565670 -75814851 - MLT1A1 LTR MaLR 0 365 2 2056 113 41 0 chr15 25565779 25566072 -75814449 + AluSg SINE Alu 1 305 -5 481 181 55 48 chr15 25566083 25566229 -75814292 + L1ME1 LINE L1 6017 6162 -2 210 360 33 7 chr15 25566530 25566680 -75813841 - L2 LINE L2 -474 2840 2687 243 360 11 0 chr15 25566806 25566895 -75813626 + Charlie4 DNA MER1_type 1867 1956 -5 360 152 0 0 chr15 25568200 25568266 -75812255 + (CA)n Simple_repeat Simple_repeat 2 67 0 1960 87 20 0 chr15 25569354 25569608 -75810913 + AluSq SINE Alu 44 302 -11 355 292 179 40 chr15 25570783 25571112 -75809409 + HAL1 LINE L1 91 465 -2042 3348 137 16 2 chr15 25571168 25571673 -75808848 - L1MB3 LINE L1 -11 6172 5661 398 255 0 11 chr15 25571673 25571767 -75808754 + HAL1 LINE L1 811 903 -1604 1794 170 0 13 chr15 25571801 25572112 -75808409 + AluJb SINE Alu 1 307 -5 1199 244 132 9 chr15 25572115 25572570 -75807951 + HAL1 LINE L1 1104 1614 -893 603 221 202 54 chr15 25572728 25573045 -75807476 - L2 LINE L2 0 3313 2950 298 248 112 8 chr15 25573418 25573543 -75806978 - MIR SINE MIR -102 160 23 262 254 30 0 chr15 25574382 25574449 -75806072 + L1MC4a LINE L1 7739 7807 -1 200 278 262 0 chr15 25574476 25574667 -75805854 + L2 LINE L2 664 904 -2410 231 277 61 34 chr15 25574899 25575047 -75805474 - HAL1 LINE L1 -665 1842 1691 311 213 101 77 chr15 25575053 25575171 -75805350 - L1MC5 LINE L1 -36 7925 7800 2164 123 0 19 chr15 25575171 25575488 -75805033 - AluSq SINE Alu 0 313 3 311 213 101 77 chr15 25575488 25575538 -75804983 - L1MC5 LINE L1 -161 7800 7753 779 156 0 0 chr15 25575561 25575670 -75804851 + FLAM_C SINE Alu 18 126 -17 431 291 194 18 chr15 25576271 25576671 -75803850 + L1ME LINE L1 5351 5820 -301 233 329 13 0 chr15 25576679 25576755 -75803766 + L2 LINE L2 1177 1253 -2061 1616 125 101 87 chr15 25576814 25577181 -75803340 + L1MB8 LINE L1 5806 6177 -1 1523 159 34 23 chr15 25577450 25577714 -75802807 - AluJb SINE Alu -45 267 1 514 248 117 5 chr15 25577721 25577927 -75802594 + L1ME4a LINE L1 5713 5941 -180 203 345 0 0 chr15 25578824 25578882 -75801639 + MIR SINE MIR 90 147 -115 284 238 12 0 chr15 25579081 25579161 -75801360 - L1MB8 LINE L1 -2 6176 6096 2058 130 7 7 chr15 25579672 25579973 -75800548 + AluSq SINE Alu 1 301 -12 1908 121 0 0 chr15 25580428 25580684 -75799837 + AluSx SINE Alu 49 304 -8 989 267 48 22 chr15 25581603 25581918 -75798603 + L1ME LINE L1 5372 5694 -476 2555 50 3 0 chr15 25582004 25582304 -75798217 + AluY SINE Alu 1 301 -10 2742 278 129 45 chr15 25582481 25582757 -75797764 + L1M4 LINE L1 2773 3024 -3122 1882 161 0 0 chr15 25582757 25583048 -75797473 + AluSx SINE Alu 1 291 -21 180 0 0 0 chr15 25583052 25583072 -75797449 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 2742 278 129 45 chr15 25583072 25584275 -75796246 + L1M4 LINE L1 3026 4126 -2020 2906 122 23 25 chr15 25584275 25584710 -75795811 - Tigger2a DNA MER2_type 0 434 1 2742 278 129 45 chr15 25584710 25585021 -75795500 + L1M4 LINE L1 4126 4409 -1737 4437 77 18 0 chr15 25585021 25585565 -75794956 - MER41A LTR ERV1 0 554 1 2742 278 129 45 chr15 25585565 25586093 -75794428 + L1M4 LINE L1 4409 5295 -851 24 32 0 0 chr15 25586347 25586378 -75794143 + AT_rich Low_complexity Low_complexity 1 31 0 183 329 170 20 chr15 25586534 25586887 -75793634 - L2 LINE L2 -997 2317 1912 23 0 0 0 chr15 25590719 25590742 -75789779 + AT_rich Low_complexity Low_complexity 1 23 0 2052 153 25 25 chr15 25592958 25593323 -75787198 + MLT1A1 LTR MaLR 1 365 0 222 329 114 25 chr15 25596269 25596427 -75784094 - L2 LINE L2 -10 3303 3132 2334 95 3 7 chr15 25596688 25596994 -75783527 + AluSg SINE Alu 1 305 -5 2230 114 0 0 chr15 25597007 25597297 -75783224 + AluSx SINE Alu 1 290 -22 2249 67 3 11 chr15 25597413 25597735 -75782786 - AluY SINE Alu 0 320 1 2535 230 184 22 chr15 25599000 25599117 -75781404 + L1MC4 LINE L1 6484 6581 -1461 294 29 0 0 chr15 25599117 25599152 -75781369 + (CA)n Simple_repeat Simple_repeat 2 36 0 2535 230 184 22 chr15 25599152 25599992 -75780529 + L1MC4 LINE L1 6581 7596 -446 184 270 81 40 chr15 25600066 25600140 -75780381 - L2 LINE L2 0 3313 3237 460 291 49 85 chr15 25600845 25601291 -75779230 + MLT1J LTR MaLR 5 434 -77 2131 104 10 0 chr15 25601329 25601618 -75778903 + AluSc SINE Alu 5 296 -13 252 290 65 19 chr15 25602051 25602158 -75778363 + MLT1K LTR MaLR 457 568 -20 449 203 0 6 chr15 25602255 25602418 -75778103 + (CCA)n Simple_repeat Simple_repeat 3 164 0 804 248 5 0 chr15 25602520 25602718 -75777803 + L1MC2 LINE L1 3544 3742 -2404 1141 157 0 0 chr15 25602720 25602886 -75777635 + AluJb SINE Alu 3 168 -144 2211 95 7 3 chr15 25602912 25603206 -75777315 - AluSg SINE Alu -15 295 1 2829 190 55 4 chr15 25603207 25604111 -75776410 + L1MC2 LINE L1 4899 5858 -486 914 122 0 6 chr15 25604298 25604479 -75776042 + (CCA)n Simple_repeat Simple_repeat 1 180 0 603 206 0 0 chr15 25604509 25604684 -75775837 + (CCA)n Simple_repeat Simple_repeat 3 177 0 312 208 0 0 chr15 25604701 25604797 -75775724 + (CCA)n Simple_repeat Simple_repeat 3 98 0 501 239 8 45 chr15 25605155 25605289 -75775232 + MIR SINE MIR 112 240 -22 2308 115 0 0 chr15 25605443 25605748 -75774773 - AluSx SINE Alu -7 305 1 218 79 0 26 chr15 25606913 25606951 -75773570 + (TAAAAA)n Simple_repeat Simple_repeat 2 38 0 2318 100 0 0 chr15 25607421 25607722 -75772799 - AluSx SINE Alu -11 301 1 29 90 0 0 chr15 25608994 25609072 -75771449 + AT_rich Low_complexity Low_complexity 1 78 0 2381 75 0 3 chr15 25609079 25609373 -75771148 + AluSg SINE Alu 1 293 -17 1554 135 0 12 chr15 25609819 25610064 -75770457 + AluJo SINE Alu 71 312 0 1507 158 29 40 chr15 25610885 25611163 -75769358 + AluJb SINE Alu 9 283 -29 958 248 83 73 chr15 25611579 25612168 -75768353 - L1ME4a LINE L1 -14 6176 5582 372 332 60 11 chr15 25612220 25612485 -75768036 - L1M4 LINE L1 -3532 2614 2337 260 261 72 29 chr15 25612608 25612746 -75767775 - L1ME4a LINE L1 -4055 2341 2198 264 289 0 12 chr15 25612885 25612968 -75767553 + (CATATA)n Simple_repeat Simple_repeat 3 84 0 2303 95 0 3 chr15 25613266 25613570 -75766951 - AluY SINE Alu -8 303 1 21 0 0 0 chr15 25614358 25614379 -75766142 + AT_rich Low_complexity Low_complexity 1 21 0 1609 179 0 11 chr15 25614653 25614932 -75765589 + AluJo SINE Alu 23 298 -14 1351 13 0 0 chr15 25615612 25615762 -75764759 - AluYb8 SINE Alu -2 316 167 2384 84 0 7 chr15 25617137 25617436 -75763085 + AluSq SINE Alu 1 297 -16 214 258 114 30 chr15 25617653 25617785 -75762736 + MIR SINE MIR 120 262 0 2373 89 0 0 chr15 25617941 25618232 -75762289 - AluSc SINE Alu -18 291 1 506 195 81 16 chr15 25618387 25618510 -75762011 + MLT1C LTR MaLR 64 194 -311 24 32 0 0 chr15 25618649 25618680 -75761841 + AT_rich Low_complexity Low_complexity 1 31 0 712 191 24 154 chr15 25618707 25618953 -75761568 + MLT1C LTR MaLR 170 460 -7 2071 133 0 7 chr15 25619467 25619792 -75760729 - AluSx SINE Alu 0 323 1 1986 111 14 4 chr15 25620503 25620815 -75759706 + AluSq SINE Alu 3 317 0 599 235 33 66 chr15 25620881 25621094 -75759427 - L2 LINE L2 0 3313 3108 2015 95 9 76 chr15 25621299 25621615 -75758906 - AluSx SINE Alu -16 296 2 25 0 0 0 chr15 25621636 25621661 -75758860 + AT_rich Low_complexity Low_complexity 1 25 0 434 292 113 11 chr15 25621685 25621870 -75758651 - MIR SINE MIR -7 255 52 22 0 0 0 chr15 25622791 25622813 -75757708 + GC_rich Low_complexity Low_complexity 1 22 0 4268 169 105 53 chr15 25623747 25623883 -75756638 - Tigger6a DNA MER2_type -514 1083 955 1754 152 3 13 chr15 25623883 25624192 -75756329 + AluJo SINE Alu 3 308 -4 4268 169 105 53 chr15 25624192 25624980 -75755541 - Tigger6a DNA MER2_type -642 955 97 1850 151 0 21 chr15 25624980 25625298 -75755223 - AluJb SINE Alu 0 316 5 4268 169 105 53 chr15 25625298 25625400 -75755121 - Tigger6a DNA MER2_type -1500 97 2 210 119 0 48 chr15 25625406 25625448 -75755073 + (TA)n Simple_repeat Simple_repeat 2 41 0 6912 210 89 35 chr15 25625972 25628148 -75752373 + L1M4 LINE L1 37 2093 -4553 2448 86 0 0 chr15 25628148 25628449 -75752072 + AluY SINE Alu 1 301 -10 6912 210 89 35 chr15 25628449 25628461 -75752060 + L1M4 LINE L1 2093 2103 -4543 1900 155 27 0 chr15 25628461 25628582 -75751939 + AluJo SINE Alu 1 117 -195 315 0 0 0 chr15 25628582 25628617 -75751904 + (TAAA)n Simple_repeat Simple_repeat 2 36 0 1900 155 27 0 chr15 25628617 25628792 -75751729 + AluJo SINE Alu 117 305 -7 6912 210 89 35 chr15 25628792 25629099 -75751422 + L1M4 LINE L1 2103 2699 -3947 829 230 45 45 chr15 25629096 25629409 -75751112 + L1M4 LINE L1 3539 3851 -2793 * 844 191 13 0 chr15 25629414 25629566 -75750955 + FRAM SINE Alu 1 40 0 415 209 17 9 chr15 25629566 25629681 -75750840 + GA-rich Low_complexity Low_complexity 4 119 0 349 269 15 8 chr15 25629684 25629818 -75750703 + L1M4 LINE L1 3881 4015 -2629 455 230 0 0 chr15 25629821 25629908 -75750613 + L2 LINE L2 3218 3304 -9 2170 114 0 0 chr15 25630103 25630392 -75750129 - AluSx SINE Alu -23 289 1 231 173 0 0 chr15 25630420 25630472 -75750049 + (CA)n Simple_repeat Simple_repeat 2 53 0 350 225 79 0 chr15 25630472 25630561 -75749960 + MER112 DNA MER1_type 67 162 -98 647 312 50 80 chr15 25630561 25630950 -75749571 + L2 LINE L2 293 663 -2651 2518 53 0 0 chr15 25630950 25631249 -75749272 - AluY SINE Alu -12 299 1 647 312 50 80 chr15 25631249 25631394 -75749127 + L2 LINE L2 663 811 -2503 493 235 69 104 chr15 25631394 25631654 -75748867 - MER102a DNA MER1_type -2 328 78 266 271 110 88 chr15 25631771 25631801 -75748720 + HAL1 LINE L1 149 177 -2330 2481 52 3 13 chr15 25631801 25632107 -75748414 + AluY SINE Alu 1 303 -8 266 271 110 88 chr15 25632107 25632505 -75748016 + HAL1 LINE L1 177 622 -1885 708 255 47 56 chr15 25632549 25632890 -75747631 - HAL1 LINE L1 -335 2172 1835 481 30 30 0 chr15 25632891 25632958 -75747563 + (GA)n Simple_repeat Simple_repeat 2 70 0 234 95 0 48 chr15 25632961 25633003 -75747518 - MLT2C1 LTR ERVL -48 349 310 390 96 41 0 chr15 25633045 25633118 -75747403 + GA-rich Low_complexity Low_complexity 2 77 0 1588 184 34 24 chr15 25633121 25633449 -75747072 - MLT2D LTR ERVL -20 534 55 3444 275 113 44 chr15 25633527 25633628 -75746893 + L1ME3A LINE L1 1868 1961 -4254 2108 124 3 7 chr15 25633628 25633934 -75746587 - AluSq SINE Alu -8 305 1 3444 275 113 44 chr15 25633934 25634169 -75746352 + L1ME3A LINE L1 1961 2178 -4037 2345 95 0 0 chr15 25634169 25634464 -75746057 + AluY SINE Alu 9 303 -8 3444 275 113 44 chr15 25634464 25635554 -75744967 + L1ME3A LINE L1 2178 3192 -3023 501 230 22 65 chr15 25635554 25635693 -75744828 - MER94 DNA DNA 0 134 2 3444 275 113 44 chr15 25635693 25636091 -75744430 + L1ME3A LINE L1 3192 3561 -2654 1579 174 34 31 chr15 25636091 25636384 -75744137 + AluJo SINE Alu 1 294 -18 3444 275 113 44 chr15 25636384 25637004 -75743517 + L1ME3A LINE L1 3561 4137 -2078 3144 176 26 11 chr15 25637004 25637545 -75742976 - MER44D DNA MER2_type -1 604 1 3444 275 113 44 chr15 25637545 25637702 -75742819 + L1ME3A LINE L1 4137 4282 -1933 2281 79 28 0 chr15 25637702 25637993 -75742528 - AluSx SINE Alu -13 299 1 2488 64 0 0 chr15 25638002 25638300 -75742221 - AluY SINE Alu -11 300 3 3444 275 113 44 chr15 25638300 25638865 -75741656 + L1ME3A LINE L1 4289 5341 -874 2132 84 30 7 chr15 25638940 25639237 -75741284 + AluSg SINE Alu 1 304 -6 560 247 124 6 chr15 25639239 25639496 -75741025 + L1ME3A LINE L1 5365 5644 -595 558 262 48 6 chr15 25639505 25639673 -75740848 + LTR41 LTR ERVL 7 181 -592 369 250 47 123 chr15 25639923 25640199 -75740322 + LTR41 LTR ERVL 510 764 -9 861 273 54 24 chr15 25640235 25640569 -75739952 + L1ME3A LINE L1 5693 6036 -203 203 217 196 0 chr15 25640788 25640834 -75739687 - L2 LINE L2 -81 3191 3137 2098 142 0 0 chr15 25640884 25641231 -75739290 - AluJb SINE Alu 0 347 1 1489 243 105 101 chr15 25641294 25641652 -75738869 + L1MEd LINE L1 78 433 -5686 1920 151 0 7 chr15 25641652 25641943 -75738578 + AluSx SINE Alu 24 312 0 1489 243 105 101 chr15 25641943 25642453 -75738068 + L1MEd LINE L1 433 949 -5170 331 360 100 20 chr15 25643388 25643588 -75736933 + L2 LINE L2 3056 3271 -1 1081 211 100 106 chr15 25643632 25644144 -75736377 - MLT1J LTR MaLR 0 511 3 270 310 0 0 chr15 25644799 25644870 -75735651 - L2 LINE L2 -1 3312 3242 2561 60 0 0 chr15 25645979 25646280 -75734241 + AluY SINE Alu 1 301 -10 2069 116 0 0 chr15 25646282 25646567 -75733954 + AluSq SINE Alu 17 301 -12 316 308 122 51 chr15 25646630 25646819 -75733702 - L1ME LINE L1 -508 5654 5443 2289 108 0 3 chr15 25646819 25647125 -75733396 + AluSx SINE Alu 1 305 -7 316 308 122 51 chr15 25647125 25647172 -75733349 - L1ME LINE L1 -719 5443 5401 393 231 23 69 chr15 25647223 25647396 -75733125 - L1ME LINE L1 -874 5272 5108 4849 146 26 43 chr15 25648926 25649021 -75731500 + L1PB4 LINE L1 5254 5349 -954 1881 144 16 19 chr15 25649021 25649334 -75731187 - AluSx SINE Alu 0 312 1 4849 146 26 43 chr15 25649334 25649479 -75731042 + L1PB4 LINE L1 5349 5495 -808 2140 109 0 0 chr15 25649479 25649763 -75730758 - AluSg SINE Alu -26 284 1 4849 146 26 43 chr15 25649763 25650454 -75730067 + L1PB4 LINE L1 5495 6300 -3 2209 111 7 0 chr15 25650666 25650964 -75729557 + AluSx SINE Alu 1 300 -12 209 258 0 41 chr15 25651337 25651434 -75729087 + CT-rich Low_complexity Low_complexity 4 96 0 306 286 85 54 chr15 25651435 25651659 -75728862 - MLT1H-int LTR MaLR -832 539 309 297 278 26 9 chr15 25651667 25651782 -75728739 - MLT1H-int LTR MaLR -1250 121 5 1028 264 117 34 chr15 25651786 25652290 -75728231 - MLT1H LTR MaLR 0 549 4 433 351 50 32 chr15 25652450 25652732 -75727789 - L3 LINE CR1 -78 1499 1213 1484 121 0 5 chr15 25653211 25653418 -75727103 - L1PB1 LINE L1 -2 6149 5944 1973 161 0 19 chr15 25654143 25654460 -75726061 + AluJb SINE Alu 1 311 -1 796 172 11 11 chr15 25654475 25654649 -75725872 + GA-rich Low_complexity Low_complexity 4 177 0 2399 121 121 3 chr15 25654654 25654859 -75725662 + MSTB LTR MaLR 2 181 -245 201 39 0 0 chr15 25654859 25654885 -75725636 + (TC)n Simple_repeat Simple_repeat 1 26 0 2399 121 121 3 chr15 25654885 25655059 -75725462 + MSTB LTR MaLR 181 426 0 702 130 32 24 chr15 25655144 25655267 -75725254 + L1MB4 LINE L1 6057 6180 0 2365 99 0 6 chr15 25655275 25655587 -75724934 - AluSg SINE Alu 0 310 1 1967 122 0 4 chr15 25656572 25656851 -75723670 - AluSx SINE Alu -18 294 17 411 264 145 50 chr15 25656873 25656962 -75723559 - MER5A DNA MER1_type -7 182 103 2532 74 0 0 chr15 25656962 25657272 -75723249 - AluY SINE Alu -1 310 1 411 264 145 50 chr15 25657272 25657341 -75723180 - MER5A DNA MER1_type -86 103 9 293 322 38 2 chr15 25657577 25657687 -75722834 + MER20B DNA MER1_type 86 202 -17 191 250 0 0 chr15 25657755 25657799 -75722722 + L2 LINE L2 774 817 -2497 1653 162 10 43 chr15 25658319 25658621 -75721900 + AluJo SINE Alu 1 292 -20 326 167 30 15 chr15 25660898 25660964 -75719557 - MER58 DNA MER1_type -4 2416 2350 487 242 12 55 chr15 25663242 25663494 -75717027 + L1MEc LINE L1 2063 2260 -3955 2261 81 3 10 chr15 25663494 25663792 -75716729 - AluSg1 SINE Alu -13 296 1 487 242 12 55 chr15 25663792 25663823 -75716698 + L1MEc LINE L1 2260 2291 -3924 804 133 23 0 chr15 25663823 25663951 -75716570 + AluJb SINE Alu 1 131 -181 442 226 11 0 chr15 25713952 25714045 -75666476 + MER81 DNA DNA 16 109 -5 267 194 16 16 chr15 25714055 25714117 -75666404 - MLT1K LTR MaLR -23 565 504 284 256 88 40 chr15 25714214 25714339 -75666182 - MER5B DNA MER1_type -31 147 17 581 257 11 29 chr15 25714371 25714546 -75665975 - MER5B DNA MER1_type -5 173 2 190 238 38 100 chr15 25714842 25714922 -75665599 + MIR SINE MIR 77 151 -111 2464 59 10 7 chr15 25716213 25716520 -75664001 + AluY SINE Alu 1 308 -3 974 227 68 31 chr15 25716820 25717630 -75662891 - L1M4c LINE L1 -4838 1808 919 1020 229 135 52 chr15 25717927 25718290 -75662231 - MSTD LTR MaLR -2 394 2 26 50 0 0 chr15 25718351 25718391 -75662130 + AT_rich Low_complexity Low_complexity 1 40 0 210 276 92 61 chr15 25719356 25719454 -75661067 - MIR SINE MIR -146 116 16 185 321 0 0 chr15 25719744 25719800 -75660721 + MIR3 SINE MIR 112 167 -41 3211 139 79 18 chr15 25720791 25721359 -75659162 + LTR26 LTR ERV1 1 603 0 39 0 0 0 chr15 25722197 25722236 -75658285 + GC_rich Low_complexity Low_complexity 1 39 0 1032 202 163 28 chr15 25722991 25723273 -75657248 + L1MDa LINE L1 27 346 -6194 334 312 102 9 chr15 25723647 25723980 -75656541 + HAL1 LINE L1 1235 1598 -909 782 248 124 62 chr15 25724288 25724804 -75655717 + MER45C DNA AcHobo 46 951 -2 2065 213 73 64 chr15 25724806 25725355 -75655166 + MLT2B3 LTR ERVL 1 554 0 1780 264 130 14 chr15 25725713 25726305 -75654216 - MLT2F LTR ERVL -2 661 1 2613 65 0 0 chr15 25726608 25726916 -75653605 + AluY SINE Alu 1 308 -3 312 273 82 26 chr15 25727325 25727702 -75652819 + HAL1b LINE L1 373 792 -556 650 219 14 139 chr15 25728027 25728315 -75652206 + L1MC5 LINE L1 6710 6961 -1000 522 280 127 34 chr15 25728320 25728588 -75651933 - LTR16B LTR ERVL 0 464 172 758 246 101 86 chr15 25728742 25728998 -75651523 + L1MC5 LINE L1 6966 7234 -727 2295 113 3 0 chr15 25728998 25729300 -75651221 + AluSq SINE Alu 1 303 -10 758 246 101 86 chr15 25729300 25729510 -75651011 + L1MC5 LINE L1 7234 7439 -522 234 239 58 71 chr15 25729655 25729810 -75650711 + L1ME3 LINE L1 5963 6115 -47 1901 138 10 3 chr15 25730078 25730375 -75650146 + AluSx SINE Alu 1 299 -13 259 306 97 8 chr15 25730391 25730515 -75650006 + L1MDa LINE L1 461 595 -5935 318 265 117 12 chr15 25731232 25731394 -75649127 + L1MDa LINE L1 917 1095 -5448 686 247 72 51 chr15 25731663 25732196 -75648325 + L1MDa LINE L1 2258 2748 -3792 * 1120 237 125 25 chr15 25732182 25732663 -75647858 + L1MDa LINE L1 3332 3860 -2680 2896 175 15 0 chr15 25732678 25733226 -75647295 + L1PA16 LINE L1 4848 5403 -743 4537 115 10 30 chr15 25733239 25733916 -75646605 + L1PA16 LINE L1 5494 6157 -9 2515 53 0 31 chr15 25733938 25734256 -75646265 + AluY SINE Alu 1 308 -3 241 191 32 32 chr15 25734259 25734322 -75646199 + L1MDa LINE L1 3868 3930 -2610 1398 175 30 17 chr15 25734621 25734855 -75645666 + MER8 DNA MER2_type 2 238 -1 319 264 0 0 chr15 25734911 25734983 -75645538 - L1MEd LINE L1 -6037 82 11 344 294 50 1 chr15 25734985 25735127 -75645394 - L1M4 LINE L1 -1123 5023 4873 375 175 16 0 chr15 25735150 25735213 -75645308 + MER92B LTR ERV1 3 66 -570 1715 185 49 0 chr15 25735219 25735586 -75644935 - L1M4 LINE L1 -1828 4318 3934 1258 185 14 0 chr15 25735588 25735799 -75644722 - AluJo SINE Alu -15 297 84 2297 202 2 0 chr15 25735803 25736299 -75644222 - L1M4 LINE L1 -2205 3941 3445 2302 189 13 13 chr15 25736299 25736768 -75643753 + L1PA16 LINE L1 5694 6165 -1 1434 177 76 12 chr15 25736768 25737096 -75643425 + MER92B LTR ERV1 60 408 -228 303 238 0 0 chr15 25737096 25737180 -75643341 + L1M4 LINE L1 3400 3483 -2663 4646 181 35 2 chr15 25737181 25738197 -75642324 - L1 LINE L1 -992 5154 4105 618 135 0 0 chr15 25738299 25738395 -75642126 + MSTB LTR MaLR 331 426 0 3120 178 19 17 chr15 25738718 25739360 -75641161 + L1MD2 LINE L1 5534 6176 -183 523 183 16 16 chr15 25739361 25739487 -75641034 + L1MD1 LINE L1 6117 6242 0 424 300 58 27 chr15 25739514 25739737 -75640784 - L1M4 LINE L1 -1686 4460 4231 308 267 39 36 chr15 25740006 25740348 -75640173 - L1M4 LINE L1 -2423 3723 3386 1345 146 26 15 chr15 25740349 25740617 -75639904 - L1MA4 LINE L1 -3 6297 6027 321 306 99 46 chr15 25740791 25741115 -75639406 - HAL1 LINE L1 -635 1872 1532 624 263 112 10 chr15 25741240 25741552 -75638969 - HAL1 LINE L1 -1157 1350 1007 311 339 90 44 chr15 25741989 25742444 -75638077 + L1MC/D LINE L1 4682 5157 -989 277 322 85 22 chr15 25742506 25742972 -75637549 + L1MC/D LINE L1 5257 5743 -429 361 214 0 36 chr15 25743257 25743397 -75637124 + GA-rich Low_complexity Low_complexity 4 138 0 2034 103 38 14 chr15 25743471 25743761 -75636760 - AluSx SINE Alu -15 297 1 233 328 161 10 chr15 25744251 25744443 -75636078 - MIR SINE MIR -6 256 36 2510 66 0 0 chr15 25745254 25745556 -75634965 + AluY SINE Alu 1 302 -9 1434 142 40 4 chr15 25745686 25745939 -75634582 + MSTB1 LTR MaLR 167 428 -4 1743 180 16 0 chr15 25745956 25746363 -75634158 - MLT2B1 LTR ERVL -56 459 1 665 190 67 6 chr15 25747694 25747873 -75632648 - L1MD3 LINE L1 -14 7981 7792 180 0 0 0 chr15 25748103 25748123 -75632398 + (TG)n Simple_repeat Simple_repeat 2 21 0 198 287 298 23 chr15 25748538 25749232 -75631289 + L2 LINE L2 1853 2737 -577 1173 252 35 19 chr15 25749232 25749656 -75630865 + L1MC4a LINE L1 5511 5941 -1867 220 282 158 34 chr15 25749871 25750137 -75630384 + L2 LINE L2 2804 3102 -211 1410 209 28 63 chr15 25750673 25751071 -75629450 - MLT1B LTR MaLR -6 384 1 1573 232 96 59 chr15 25751071 25751955 -75628566 - MLT1B-int LTR MaLR 0 1735 497 1937 121 121 26 chr15 25751955 25752247 -75628274 - Tigger1 DNA MER2_type 0 2418 2079 2220 110 7 3 chr15 25752247 25752555 -75627966 - AluSg SINE Alu 0 310 2 1937 121 121 26 chr15 25752555 25752649 -75627872 - Tigger1 DNA MER2_type -339 2079 1995 2153 141 0 6 chr15 25753171 25753483 -75627038 - AluSg SINE Alu 0 310 1 485 273 18 0 chr15 25753724 25753834 -75626687 - MER81 DNA DNA 0 114 3 207 0 0 0 chr15 25754012 25754035 -75626486 + (TTG)n Simple_repeat Simple_repeat 2 24 0 262 326 86 31 chr15 25754608 25754958 -75625563 - L1MC5 LINE L1 -455 7506 7138 * 2471 235 74 19 chr15 25754954 25756741 -75623780 - L1MCa LINE L1 -3374 3052 1053 2928 152 45 7 chr15 25756756 25757314 -75623207 - L1MA8 LINE L1 -5 6286 5708 687 237 46 92 chr15 25757323 25757625 -75622896 - L1MD3 LINE L1 -701 7084 6770 2626 63 8 11 chr15 25757625 25757991 -75622530 - L1PA8 LINE L1 -3 6169 5805 687 237 46 92 chr15 25757991 25758244 -75622277 - L1MD3 LINE L1 -1015 6770 6507 2773 3 0 0 chr15 25758244 25758542 -75621979 + AluYa5 SINE Alu 1 298 -13 687 237 46 92 chr15 25758542 25758877 -75621644 - L1MD3 LINE L1 -1278 6507 6158 1461 163 87 24 chr15 25758877 25759166 -75621355 - AluJo SINE Alu -5 307 1 687 237 46 92 chr15 25759166 25759803 -75620718 - L1MD3 LINE L1 -1627 6158 5745 356 245 20 0 chr15 25759818 25759916 -75620605 - L1MD3 LINE L1 -501 5663 5564 * 2606 234 30 74 chr15 25759902 25760326 -75620195 + L1MDb LINE L1 536 977 -5429 2174 94 4 0 chr15 25760326 25760625 -75619896 + AluSx SINE Alu 10 309 0 2606 234 30 74 chr15 25760625 25761210 -75619311 + L1MDb LINE L1 977 1488 -4918 408 287 0 0 chr15 25761264 25761414 -75619107 - L1MD3 LINE L1 -1778 4368 4219 4543 233 56 82 chr15 25761499 25763874 -75616647 + L1M4 LINE L1 2739 5051 -1095 304 259 112 9 chr15 25764000 25764116 -75616405 + L1ME LINE L1 1087 1214 -5326 422 265 42 52 chr15 25764183 25764470 -75616051 + L1ME LINE L1 3896 4179 -2361 775 260 129 73 chr15 25765074 25765317 -75615204 + L1ME LINE L1 4212 4440 -2100 1985 178 58 9 chr15 25765317 25765762 -75614759 + MLT1C LTR MaLR 1 467 0 775 260 129 73 chr15 25765762 25766260 -75614261 + L1ME LINE L1 4440 4995 -1545 23 0 0 0 chr15 25766261 25766284 -75614237 + AT_rich Low_complexity Low_complexity 1 23 0 1280 262 67 19 chr15 25766284 25767167 -75613354 + L1ME LINE L1 5043 5972 -586 1763 266 85 9 chr15 25767210 25768090 -75612431 + L1M4 LINE L1 2855 3801 -2345 306 244 49 0 chr15 25768254 25768336 -75612185 + MLT1J2 LTR MaLR 354 439 -11 2037 117 3 0 chr15 25768374 25768694 -75611827 - AluSx SINE Alu 0 321 1 278 309 65 30 chr15 25769015 25769183 -75611338 - L1MEd LINE L1 -5663 456 283 249 57 0 0 chr15 25769294 25769329 -75611192 + (T)n Simple_repeat Simple_repeat 1 35 0 263 378 27 0 chr15 25769402 25769513 -75611008 - MIR SINE MIR -62 146 33 403 276 125 117 chr15 25771029 25771361 -75609160 - L1M2 LINE L1 -5624 1225 897 231 36 0 0 chr15 25771361 25771389 -75609132 + (CGGGGG)n Simple_repeat Simple_repeat 2 29 0 403 276 125 117 chr15 25771389 25771794 -75608727 - L1M2 LINE L1 -5952 897 527 465 175 58 10 chr15 25774149 25774252 -75606269 + MIR SINE MIR 85 192 -70 291 323 13 77 chr15 25774314 25774469 -75606052 - MIR3 SINE MIR -63 145 1 7656 202 30 87 chr15 25776193 25778948 -75601573 - L1MC1 LINE L1 -2 6400 3934 855 154 0 0 chr15 25778948 25779078 -75601443 - AluSq/x SINE Alu -175 138 9 7656 202 30 87 chr15 25779078 25780828 -75599693 - L1MC1 LINE L1 -2468 3934 2086 4598 221 50 28 chr15 25780929 25782483 -75598038 - L1 LINE L1 -2302 3913 2326 636 222 5 97 chr15 25782488 25782695 -75597826 + L1MCa LINE L1 353 540 -6024 * 3356 188 41 15 chr15 25782693 25783780 -75596741 + L1MCa LINE L1 825 2048 -4516 327 264 35 62 chr15 25783783 25783927 -75596594 - L1M4 LINE L1 -1788 4358 4219 1512 33 0 0 chr15 25783966 25784146 -75596375 - L1PA4 LINE L1 0 6155 5976 8447 28 4 0 chr15 25784146 25785208 -75595313 + L1P LINE L1 4283 5348 -798 344 340 7 0 chr15 25785223 25785367 -75595154 - L1M4 LINE L1 -1987 4159 4015 728 301 73 36 chr15 25785619 25786689 -75593832 - L1M4 LINE L1 -2467 3679 2566 288 215 41 33 chr15 25786779 25786900 -75593621 - L1M LINE L1 -759 5405 5284 360 169 323 40 chr15 25786990 25787114 -75593407 - L1M4 LINE L1 -1491 4655 4497 885 159 7 0 chr15 25787471 25787609 -75592912 - ERVL LTR ERVL -1264 4500 4362 13867 194 43 45 chr15 25787610 25790522 -75589999 - ERVL LTR ERVL -1450 4204 1299 373 174 29 0 chr15 25790516 25790585 -75589936 - ERVL LTR ERVL -5157 607 537 * 1144 231 82 30 chr15 25790586 25790950 -75589571 + L1MC5 LINE L1 5390 5772 -2036 672 258 59 33 chr15 25791222 25791535 -75588986 + L1MC5 LINE L1 6545 6868 -944 319 269 37 15 chr15 25791564 25791698 -75588823 + L1M4 LINE L1 4970 5106 -1040 279 0 0 0 chr15 25791824 25791855 -75588666 + (CA)n Simple_repeat Simple_repeat 2 32 0 551 184 10 0 chr15 25792046 25792144 -75588377 + AluJ/FLAM SINE Alu 1 99 -213 289 314 84 25 chr15 25792360 25792634 -75587887 + L1MEd LINE L1 611 900 -5219 2217 118 0 0 chr15 25792714 25793018 -75587503 + AluSc SINE Alu 1 304 -5 3510 161 22 20 chr15 25793019 25793659 -75586862 + L1MA4 LINE L1 5660 6300 0 679 267 151 46 chr15 25793687 25794118 -75586403 - LTR33 LTR ERVL -14 507 32 478 220 85 14 chr15 25794164 25794305 -75586216 + L1MC5 LINE L1 7076 7226 -735 225 268 102 57 chr15 25794326 25794483 -75586038 + L1MC4a LINE L1 7244 7407 -401 261 231 19 0 chr15 25794613 25794665 -75585856 - MER31B LTR ERV1 -395 71 19 418 286 56 56 chr15 25794670 25794848 -75585673 + LTR16A1 LTR ERVL 280 457 0 252 270 70 20 chr15 25795089 25795189 -75585332 + ERVL LTR ERVL 2477 2581 -3183 646 195 70 0 chr15 25795190 25795318 -75585203 - L1MC1 LINE L1 0 6333 6197 * 1315 164 36 49 chr15 25795316 25795621 -75584900 - L1MDa LINE L1 -4249 2291 1991 2119 194 48 22 chr15 25795622 25795984 -75584537 + MSTB LTR MaLR 1 377 -49 2031 121 90 36 chr15 25795984 25796340 -75584181 - THE1C LTR MaLR 0 375 1 2119 194 48 22 chr15 25796340 25796390 -75584131 + MSTB LTR MaLR 377 424 -2 9977 163 22 18 chr15 25796390 25797368 -75583153 + MSTB-int LTR MaLR 1 992 -659 1988 136 10 13 chr15 25797368 25797670 -75582851 + AluSg SINE Alu 1 301 -9 9977 163 22 18 chr15 25797670 25798334 -75582187 + MSTB-int LTR MaLR 992 1651 0 2486 151 64 10 chr15 25798334 25798738 -75581783 + MSTB LTR MaLR 1 426 0 6457 226 84 44 chr15 25798739 25799103 -75581418 - L1MDa LINE L1 -4547 1993 1645 2397 169 46 7 chr15 25799103 25799518 -75581003 + MSTB1 LTR MaLR 2 432 0 6457 226 84 44 chr15 25799518 25799943 -75580578 - L1MDa LINE L1 -4895 1645 1238 2244 117 0 3 chr15 25799943 25800241 -75580280 - AluSx SINE Alu -15 297 1 6457 226 84 44 chr15 25800241 25801115 -75579406 - L1MDa LINE L1 -5302 1238 242 195 100 0 0 chr15 25801115 25801145 -75579376 + (TTTG)n Simple_repeat Simple_repeat 2 31 0 6457 226 84 44 chr15 25801145 25801382 -75579139 - L1MDa LINE L1 -6298 242 16 302 140 0 0 chr15 25801774 25801824 -75578697 - MLT2B1 LTR ERVL -2 518 469 898 255 5 20 chr15 25801891 25802091 -75578430 - MLT2B1 LTR ERVL -63 457 261 1499 287 81 20 chr15 25802228 25803350 -75577171 + L1ME3A LINE L1 4930 6166 -2 270 0 0 0 chr15 25803717 25803747 -75576774 + (TTG)n Simple_repeat Simple_repeat 2 31 0 24 77 0 0 chr15 25803820 25803872 -75576649 + AT_rich Low_complexity Low_complexity 1 52 0 1034 301 106 21 chr15 25804123 25804623 -75575898 + MLT1G1 LTR MaLR 1 595 0 2237 242 73 9 chr15 25805883 25806047 -75574474 + L1MDa LINE L1 2333 2485 -4055 491 17 0 0 chr15 25806047 25806105 -75574416 + L1PA4 LINE L1 6095 6152 -3 2237 242 73 9 chr15 25806105 25806911 -75573610 + L1MDa LINE L1 2485 3374 -3166 2181 230 67 73 chr15 25806904 25807151 -75573370 + L1MDa LINE L1 36 283 -6257 * 189 0 0 0 chr15 25807151 25807172 -75573349 + (CAAA)n Simple_repeat Simple_repeat 2 22 0 2181 230 67 73 chr15 25807172 25807849 -75572672 + L1MDa LINE L1 283 1204 -5336 1865 222 93 39 chr15 25807866 25808321 -75572200 + L1MDa LINE L1 3646 4154 -2386 2544 57 0 0 chr15 25808321 25808620 -75571901 + AluY SINE Alu 1 299 -12 1865 222 93 39 chr15 25808620 25808861 -75571660 + L1MDa LINE L1 4154 4380 -2160 247 363 19 25 chr15 25808906 25809063 -75571458 - MIR SINE MIR -73 189 34 212 132 0 53 chr15 25809909 25809947 -75570574 + L2 LINE L2 3262 3297 -16 1391 166 29 4 chr15 25809959 25810200 -75570321 - MLT1A1 LTR MaLR -1 364 118 303 326 101 23 chr15 25812329 25812547 -75567974 + L1MC1 LINE L1 5552 5786 -2022 265 151 57 25 chr15 25814344 25814503 -75566018 + (CTGTG)n Simple_repeat Simple_repeat 1 164 0 191 36 36 0 chr15 25817114 25817142 -75563379 + (TTTG)n Simple_repeat Simple_repeat 2 30 0 2188 88 7 29 chr15 25820030 25820336 -75560185 - AluSx SINE Alu -13 299 1 2362 74 0 10 chr15 25820728 25821025 -75559496 + AluY SINE Alu 1 294 -17 1721 52 0 19 chr15 25821137 25821349 -75559172 - AluY SINE Alu -103 208 1 451 232 71 54 chr15 25821355 25821579 -75558942 + L1MC5 LINE L1 7685 7912 -49 422 272 44 0 chr15 25822924 25823060 -75557461 - Charlie1 DNA MER1_type 0 2761 2620 * 574 207 112 95 chr15 25823042 25823274 -75557247 - Charlie1 DNA MER1_type -2521 240 5 313 237 85 25 chr15 25823558 25823676 -75556845 - MLT1I LTR MaLR -244 165 41 2379 75 7 0 chr15 25823683 25823975 -75556546 - AluY SINE Alu -9 302 9 1896 124 71 0 chr15 25824333 25824615 -75555906 - AluSx SINE Alu -10 302 1 262 295 9 62 chr15 25824699 25824811 -75555710 + MIR SINE MIR 136 241 -21 262 219 68 0 chr15 25825794 25825867 -75554654 + L1MEc LINE L1 1129 1206 -5217 * 366 242 10 20 chr15 25825866 25825965 -75554556 + L1MEc LINE L1 2677 2774 -4348 4138 257 60 15 chr15 25825986 25827412 -75553109 + L1MD2 LINE L1 3636 5126 -1815 3852 111 7 32 chr15 25827412 25828007 -75552514 - LTR12 LTR ERV1 -134 580 1 5147 209 45 32 chr15 25828008 25829999 -75550522 + L1MD2 LINE L1 5123 7145 -9 1537 215 9 25 chr15 25830018 25830343 -75550178 + L1MC1 LINE L1 6009 6328 -5 534 278 68 12 chr15 25830350 25830737 -75549784 + L1MEc LINE L1 2772 3145 -3796 323 201 36 65 chr15 25830800 25830908 -75549613 - L1M4b LINE L1 -5283 1263 1151 459 267 37 21 chr15 25830924 25831115 -75549406 - L1M4b LINE L1 -6335 207 14 1708 185 13 3 chr15 25831499 25831797 -75548724 + AluJo SINE Alu 1 301 -11 1674 124 31 99 chr15 25831856 25832178 -75548343 + AluSx SINE Alu 1 300 -12 21 57 0 0 chr15 25832654 25832689 -75547832 + AT_rich Low_complexity Low_complexity 1 35 0 328 208 50 97 chr15 25832834 25833043 -75547478 + L1MCc LINE L1 12 519 -5903 679 229 91 47 chr15 25833533 25833852 -75546669 + L1MCc LINE L1 1665 1997 -4944 1098 270 14 0 chr15 25834258 25834536 -75545985 - MLT1B-int LTR MaLR -770 601 320 635 64 0 0 chr15 25834536 25834614 -75545907 - AluY SINE Alu -16 295 218 860 261 32 16 chr15 25834616 25834865 -75545656 - MLT1B-int LTR MaLR -1118 253 1 1806 175 3 3 chr15 25834869 25835178 -75545343 - AluJb SINE Alu -1 311 3 195 184 0 0 chr15 25835858 25835896 -75544625 + (CA)n Simple_repeat Simple_repeat 1 38 0 215 240 30 20 chr15 25837337 25837437 -75543084 + (TA)n Simple_repeat Simple_repeat 1 101 0 2403 141 27 3 chr15 25837456 25837831 -75542690 - Tigger2 DNA MER2_type -1 2717 2334 8227 22 1 0 chr15 25837872 25839523 -75540998 + L1PA3 LINE L1 4507 6155 0 1759 141 3 21 chr15 25839664 25839948 -75540573 - L1PA16 LINE L1 0 6166 5888 199 267 0 78 chr15 25840305 25840421 -75540100 + L2 LINE L2 3203 3309 -4 21 0 0 0 chr15 25840748 25840769 -75539752 + AT_rich Low_complexity Low_complexity 1 21 0 489 200 78 9 chr15 25841440 25841555 -75538966 - MIR SINE MIR -103 159 37 1278 211 42 7 chr15 25841847 25842132 -75538389 + MLT1F LTR MaLR 243 537 -5 263 270 0 0 chr15 25842305 25842368 -75538153 - L2 LINE L2 -5 3308 3246 281 318 85 23 chr15 25842419 25842595 -75537926 - LTR16C LTR ERVL -218 273 87 2425 83 0 3 chr15 25842829 25843141 -75537380 + AluSq SINE Alu 1 311 -2 1434 224 55 22 chr15 25843607 25843969 -75536552 + MLT1A2 LTR MaLR 1 374 0 2436 91 0 0 chr15 25844333 25844641 -75535880 - AluY SINE Alu -3 308 1 216 229 0 29 chr15 25845053 25845123 -75535398 + T-rich Low_complexity Low_complexity 2 69 0 1510 173 41 77 chr15 25847888 25847940 -75532581 - MLT1B LTR MaLR -16 374 322 2169 107 4 0 chr15 25847940 25848259 -75532262 + AluSq SINE Alu 1 320 0 1510 173 41 77 chr15 25848259 25848593 -75531928 - MLT1B LTR MaLR -68 322 1 372 288 36 29 chr15 25848682 25848852 -75531669 + MIR SINE MIR 11 177 -60 186 43 0 0 chr15 25849262 25849285 -75531236 + (TAAA)n Simple_repeat Simple_repeat 2 24 0 1153 138 87 18 chr15 25849373 25849591 -75530930 - THE1C LTR MaLR 0 375 143 306 125 0 0 chr15 25849720 25849768 -75530753 + (TG)n Simple_repeat Simple_repeat 2 49 0 8714 169 94 20 chr15 25849773 25850403 -75530118 - L1MCa LINE L1 -4383 2043 1461 2246 138 9 20 chr15 25850403 25850744 -75529777 - MER1B DNA MER1_type 0 337 1 8714 169 94 20 chr15 25850744 25852013 -75528508 - L1MCa LINE L1 -4965 1461 3 632 259 101 50 chr15 25852463 25853425 -75527096 - L1MEc LINE L1 -4092 2304 1258 2238 110 0 0 chr15 25853427 25853718 -75526803 - AluSg SINE Alu -19 291 1 984 259 5 0 chr15 25853812 25854024 -75526497 + MER20 DNA MER1_type 1 213 -6 516 275 90 61 chr15 25854030 25854443 -75526078 - L1MEc LINE L1 -5018 1187 790 880 157 0 0 chr15 25854684 25854818 -75525703 - AluSx SINE Alu -17 295 162 44622 39 5 1 chr15 25854818 25860941 -75519580 - L1PA4 LINE L1 -3 6152 5 1282 129 0 0 chr15 25860941 25861119 -75519402 - AluSx SINE Alu -134 178 1 2032 155 12 75 chr15 25861446 25861591 -75518930 + L1MA4 LINE L1 5898 6051 -249 2354 92 0 0 chr15 25861591 25861886 -75518635 + AluSc SINE Alu 1 295 -14 2032 155 12 75 chr15 25861886 25862166 -75518355 + L1MA4 LINE L1 6051 6296 -4 214 321 55 28 chr15 25862862 25862971 -75517550 + L3 LINE CR1 770 881 -696 1900 246 53 45 chr15 25863714 25864447 -75516074 - L1ME3 LINE L1 -169 5993 5255 1470 196 103 56 chr15 25864459 25864837 -75515684 - MSTD LTR MaLR 0 396 1 2564 62 0 0 chr15 25864840 25865145 -75515376 + AluY SINE Alu 1 305 -6 476 295 19 0 chr15 25865263 25865419 -75515102 - L1ME3 LINE L1 -957 5189 5031 21 0 0 0 chr15 25865715 25865736 -75514785 + AT_rich Low_complexity Low_complexity 1 21 0 717 277 104 6 chr15 25866004 25866357 -75514164 - MER57A LTR ERV1 0 403 41 1913 141 0 0 chr15 25868138 25868415 -75512106 - AluSx SINE Alu -4 308 32 351 234 113 96 chr15 25868494 25868776 -75511745 - L1MC5 LINE L1 -980 6981 6695 270 0 0 0 chr15 25869087 25869117 -75511404 + (A)n Simple_repeat Simple_repeat 1 30 0 2103 136 0 13 chr15 25870668 25870984 -75509537 + AluSx SINE Alu 1 312 0 1381 257 117 45 chr15 25871154 25871780 -75508741 - HAL1 LINE L1 -24 2483 1813 2688 146 37 2 chr15 25871989 25872420 -75508101 - MER7C DNA MER2_type -156 446 1 1136 284 61 50 chr15 25872438 25872896 -75507625 - MER21B LTR ERV1 -396 467 5 360 241 288 4 chr15 25872904 25873140 -75507381 - HAL1 LINE L1 -695 1812 1510 390 213 16 39 chr15 25873241 25873368 -75507153 + CT-rich Low_complexity Low_complexity 3 126 0 703 254 130 52 chr15 25873377 25873507 -75507014 - HAL1 LINE L1 -1542 965 846 337 39 19 19 chr15 25873507 25873559 -75506962 + (TG)n Simple_repeat Simple_repeat 1 52 0 703 254 130 52 chr15 25873559 25873790 -75506731 - HAL1 LINE L1 -1661 846 576 2938 228 52 47 chr15 25874006 25874812 -75505709 + L1M4 LINE L1 5 814 -5728 333 220 11 33 chr15 25874812 25874903 -75505618 + L1M4 LINE L1 737 825 -5717 295 218 23 11 chr15 25874878 25874965 -75505556 + L1M4 LINE L1 727 814 -5728 * 296 164 16 0 chr15 25874963 25875024 -75505497 + L1M4 LINE L1 735 796 -5746 3116 249 64 45 chr15 25875030 25875321 -75505200 + L1M4 LINE L1 727 1011 -5814 2356 88 0 3 chr15 25875321 25875616 -75504905 - AluSc SINE Alu -15 294 1 3116 249 64 45 chr15 25875616 25877068 -75503453 + L1M4 LINE L1 1011 2647 -4178 1472 213 11 0 chr15 25877068 25877341 -75503180 + AluJo SINE Alu 3 278 -34 3116 249 64 45 chr15 25877341 25877603 -75502918 + L1M4 LINE L1 2647 2903 -3922 1226 105 0 0 chr15 25877619 25877781 -75502740 + AluSg/x SINE Alu 143 304 -8 848 227 35 11 chr15 25877782 25878045 -75502476 + L1M4 LINE L1 2871 3135 -3509 469 151 140 26 chr15 25878186 25878362 -75502159 + L1M4 LINE L1 5177 5370 -812 1705 193 0 3 chr15 25878401 25878712 -75501809 + AluJo SINE Alu 1 310 -2 235 218 18 0 chr15 25878714 25878769 -75501752 + L1MB7 LINE L1 6108 6163 -21 22 0 0 0 chr15 25878978 25879000 -75501521 + AT_rich Low_complexity Low_complexity 1 22 0 593 228 54 58 chr15 25879112 25879246 -75501275 - L1ME1 LINE L1 -5 6421 6287 180 0 0 0 chr15 25879246 25879266 -75501255 + (TTTTG)n Simple_repeat Simple_repeat 2 21 0 593 228 54 58 chr15 25879266 25879355 -75501166 - L1ME1 LINE L1 -139 6287 6199 * 2185 249 80 26 chr15 25879350 25879712 -75500809 - L1ME1 LINE L1 -816 5590 5249 2585 74 0 3 chr15 25879712 25880024 -75500497 - AluY SINE Alu 0 311 1 2185 249 80 26 chr15 25880024 25880532 -75499989 - L1ME1 LINE L1 -1157 5249 4673 2294 144 76 13 chr15 25880534 25880931 -75499590 + MSTB LTR MaLR 3 424 -2 9541 176 11 18 chr15 25880933 25882594 -75497927 + MSTB-int LTR MaLR 3 1651 0 2401 180 65 0 chr15 25882594 25882994 -75497527 + MSTB LTR MaLR 1 426 0 202 239 15 30 chr15 25882999 25883066 -75497455 + CT-rich Low_complexity Low_complexity 4 69 0 180 111 0 0 chr15 25883074 25883101 -75497420 + (TTCC)n Simple_repeat Simple_repeat 2 28 0 4834 245 44 75 chr15 25883113 25883720 -75496801 - L1ME1 LINE L1 -1755 4651 4027 2055 100 25 4 chr15 25883720 25884039 -75496482 - AluSq SINE Alu 0 325 1 4834 245 44 75 chr15 25884039 25885692 -75494829 - L1ME1 LINE L1 -2379 4027 2460 6347 159 20 24 chr15 25885697 25886704 -75493817 - L1MC1 LINE L1 -1 6332 5330 2476 153 40 26 chr15 25886704 25887130 -75493391 - MSTB1 LTR MaLR 0 432 1 6347 159 20 24 chr15 25887130 25887566 -75492955 - L1MC1 LINE L1 -1003 5330 4894 12759 123 29 10 chr15 25887616 25890391 -75490130 + L1PA10 LINE L1 3373 6163 -5 3523 196 94 43 chr15 25890412 25891541 -75488980 - L1ME1 LINE L1 -3971 2435 1251 21 82 0 0 chr15 25891734 25891783 -75488738 + AT_rich Low_complexity Low_complexity 1 49 0 1253 144 0 6 chr15 25891944 25892125 -75488396 + AluSx SINE Alu 1 180 -132 1896 196 41 21 chr15 25892185 25892573 -75487948 + MSTD LTR MaLR 1 396 0 2192 115 14 0 chr15 25893925 25894220 -75486301 - AluSq SINE Alu -14 299 1 392 120 22 76 chr15 25894510 25894602 -75485919 + HsTC2 DNA Tc2 1 87 -1811 265 287 66 55 chr15 25894821 25895093 -75485428 - L1MEc LINE L1 -4706 1604 1330 31 26 0 0 chr15 25895096 25895134 -75485387 + AT_rich Low_complexity Low_complexity 1 38 0 2479 73 3 0 chr15 25895179 25895481 -75485040 + AluY SINE Alu 1 303 -8 10153 204 70 18 chr15 25895523 25896235 -75484286 - L1MC3 LINE L1 -39 8164 7490 180 77 0 0 chr15 25896235 25896261 -75484260 + (TTTA)n Simple_repeat Simple_repeat 4 29 0 10153 204 70 18 chr15 25896261 25898185 -75482336 - L1MC3 LINE L1 -713 7490 5396 3307 226 54 82 chr15 25898209 25899804 -75480717 - L1MC3 LINE L1 -4850 1195 1 832 296 103 77 chr15 25899860 25901071 -75479450 - L1MEc LINE L1 -4872 1247 5 28 29 0 0 chr15 25901553 25901588 -75478933 + AT_rich Low_complexity Low_complexity 1 35 0 2323 84 40 0 chr15 25903741 25904039 -75476482 - AluY SINE Alu -1 310 1 281 256 0 67 chr15 25904112 25904202 -75476319 - MIR SINE MIR -60 148 65 1763 231 45 27 chr15 25904364 25904878 -75475643 - Charlie1b DNA MER1_type 0 523 1 378 221 31 24 chr15 25905363 25905490 -75475031 - L1M4 LINE L1 -777 5369 5242 1453 194 65 26 chr15 25906393 25906744 -75473777 + MLT1A1 LTR MaLR 1 365 0 342 0 0 0 chr15 25907964 25908002 -75472519 + (CA)n Simple_repeat Simple_repeat 2 39 0 2099 225 124 37 chr15 25910874 25911214 -75469307 - Charlie2 DNA MER1_type -33 2829 2520 1978 121 0 28 chr15 25911214 25911539 -75468982 - AluSx SINE Alu 0 317 1 2099 225 124 37 chr15 25911539 25912086 -75468435 - Charlie2 DNA MER1_type -342 2520 1864 732 69 0 0 chr15 25912305 25912392 -75468129 + AluSc SINE Alu 83 169 -140 1446 135 4 13 chr15 25912497 25912727 -75467794 + AluSg/x SINE Alu 83 310 0 888 309 56 47 chr15 25913046 25913964 -75466557 + L2 LINE L2 2373 3313 0 207 176 0 0 chr15 25914605 25914639 -75465882 + GA-rich Low_complexity Low_complexity 3 36 0 769 98 22 44 chr15 25914639 25914822 -75465699 + (GGA)n Simple_repeat Simple_repeat 2 180 0 284 215 21 21 chr15 25915647 25915740 -75464781 + L1M4c LINE L1 1132 1224 -5160 * 1720 226 51 23 chr15 25915739 25916856 -75463665 + L1M4c LINE L1 1540 2782 -3600 1013 265 109 39 chr15 25916856 25917275 -75463246 - MLT1C LTR MaLR 0 467 2 2192 133 3 46 chr15 25917539 25917907 -75462614 + MSTA LTR MaLR 1 352 -76 910 235 118 42 chr15 25918847 25919136 -75461385 - MER21B LTR ERV1 -62 801 491 68 42 0 0 chr15 25919136 25919232 -75461289 + AT_rich Low_complexity Low_complexity 1 96 0 382 146 126 215 chr15 25919488 25919735 -75460786 - MER21B LTR ERV1 -627 236 12 230 328 0 0 chr15 25919775 25919833 -75460688 + C-rich Low_complexity Low_complexity 4 61 0 181 264 56 56 chr15 25920577 25920649 -75459872 - MIR SINE MIR -70 138 67 3609 76 41 6 chr15 25920760 25921244 -75459277 - MER41A LTR ERV1 -53 501 1 530 267 40 65 chr15 25922339 25922586 -75457935 + MER46C DNA MER2_type 2 242 -96 459 320 32 20 chr15 25924107 25924354 -75456167 - L1M4 LINE L1 -6269 273 24 327 239 122 22 chr15 25924393 25924573 -75455948 + L1MEc LINE L1 1774 1971 -4425 22 35 0 0 chr15 25924621 25924650 -75455871 + AT_rich Low_complexity Low_complexity 1 29 0 372 130 0 0 chr15 25925010 25925079 -75455442 + (TC)n Simple_repeat Simple_repeat 2 70 0 261 0 0 0 chr15 25925080 25925109 -75455412 + (TA)n Simple_repeat Simple_repeat 1 29 0 238 185 62 0 chr15 25925111 25925192 -75455329 - L1M4c LINE L1 -5504 880 795 271 243 48 0 chr15 25925195 25925298 -75455223 + (TA)n Simple_repeat Simple_repeat 1 108 0 1017 252 82 18 chr15 25925299 25925628 -75454893 - MLT2D LTR ERVL -64 350 1 6077 168 45 37 chr15 25925630 25925856 -75454665 - ERVL-D LTR ERVL -11 5753 5530 2478 80 0 0 chr15 25925856 25926155 -75454366 + AluY SINE Alu 1 299 -12 6077 168 45 37 chr15 25926155 25926272 -75454249 - ERVL-D LTR ERVL -234 5530 5415 2299 125 0 0 chr15 25926272 25926584 -75453937 + AluSx SINE Alu 1 312 0 6077 168 45 37 chr15 25926584 25927408 -75453113 - ERVL-D LTR ERVL -349 5415 4576 1841 214 16 3 chr15 25928268 25928651 -75451870 - MLT1B LTR MaLR 0 390 3 806 183 154 6 chr15 25929022 25929054 -75451467 + AluJo SINE Alu 86 112 -200 192 77 0 0 chr15 25929054 25929080 -75451441 + (CAA)n Simple_repeat Simple_repeat 2 27 0 806 183 154 6 chr15 25929080 25929222 -75451299 + AluJo SINE Alu 112 286 -26 591 173 0 0 chr15 25929222 25929332 -75451189 + (TA)n Simple_repeat Simple_repeat 1 110 0 367 276 136 67 chr15 25929916 25930394 -75450127 - MLT1H1 LTR MaLR -8 547 37 1018 258 63 3 chr15 25932256 25932558 -75447963 - LTR16C LTR ERVL -22 469 150 2591 148 35 0 chr15 25933154 25933560 -75446961 + MSTC LTR MaLR 9 428 0 253 290 10 40 chr15 25933847 25933947 -75446574 - L2 LINE L2 -1 3271 3175 628 244 45 29 chr15 25934247 25934604 -75445917 + LTR37A LTR ERV1 26 424 -2 182 287 16 57 chr15 25934606 25934728 -75445793 - L2 LINE L2 -379 2934 2818 22 0 0 0 chr15 25934831 25934853 -75445668 + AT_rich Low_complexity Low_complexity 1 22 0 233 192 0 0 chr15 25935343 25935395 -75445126 - MIR SINE MIR -134 128 77 261 0 0 0 chr15 25935620 25935649 -75444872 + (TTTTC)n Simple_repeat Simple_repeat 2 30 0 413 263 0 0 chr15 25936852 25936947 -75443574 - MER94 DNA DNA -1 133 39 311 300 9 9 chr15 25937833 25937943 -75442578 - L1M4 LINE L1 -1160 4986 4877 25 0 0 0 chr15 25938163 25938188 -75442333 + AT_rich Low_complexity Low_complexity 1 25 0 349 326 54 44 chr15 25939324 25939711 -75440810 + L1M4 LINE L1 2133 2523 -3623 1346 201 13 42 chr15 25939973 25940282 -75440239 + MLT1A1 LTR MaLR 1 300 -65 184 338 25 12 chr15 25940994 25941074 -75439447 - MER5A DNA MER1_type -39 150 70 7113 242 78 35 chr15 25942036 25945815 -75434706 - L1MD2 LINE L1 -29 6724 2685 185 0 40 0 chr15 25945822 25945847 -75434674 + (TA)n Simple_repeat Simple_repeat 2 27 0 1616 213 76 52 chr15 25945847 25947759 -75432762 - L1MD2 LINE L1 -4073 2467 59 841 206 44 40 chr15 25947763 25948072 -75432449 - MLT1A2 LTR MaLR -4 405 97 399 286 101 68 chr15 25948805 25949172 -75431349 + L1MEd LINE L1 292 670 -5449 2191 121 3 0 chr15 25949439 25949746 -75430775 - AluSx SINE Alu -4 308 1 392 291 127 28 chr15 25950021 25950234 -75430287 + L1MEd LINE L1 849 1082 -5037 333 252 211 0 chr15 25950245 25950368 -75430153 - MIR SINE MIR 0 262 114 762 241 91 44 chr15 25950528 25950935 -75429586 - LTR37A LTR ERV1 0 426 1 452 294 53 50 chr15 25950949 25951377 -75429144 + L1MEd LINE L1 1213 1690 -800 2330 86 0 23 chr15 25951500 25951802 -75428719 + AluSx SINE Alu 5 299 -13 2687 26 3 3 chr15 25952038 25952349 -75428172 + AluYa5 SINE Alu 1 311 0 300 242 135 68 chr15 25952505 25952890 -75427631 + L1MEd LINE L1 2194 2604 -3525 200 114 29 0 chr15 25953013 25953048 -75427473 + (TG)n Simple_repeat Simple_repeat 1 36 0 629 167 19 0 chr15 25953128 25953236 -75427285 + L1MC/D LINE L1 5599 5708 -625 519 264 121 19 chr15 25953310 25953625 -75426896 + L1MEd LINE L1 3053 3399 -2730 6356 143 21 21 chr15 25953652 25954014 -75426507 - L1MC1 LINE L1 -5 6328 5968 2280 89 0 0 chr15 25954014 25954341 -75426180 - AluSx SINE Alu 0 327 1 6356 143 21 21 chr15 25954341 25955144 -75425377 - L1MC1 LINE L1 -365 5968 5161 10598 50 6 1 chr15 25955213 25957315 -75423206 - L1PA6 LINE L1 -4 6150 4047 267 119 68 8 chr15 25958260 25958378 -75422143 + (TG)n Simple_repeat Simple_repeat 2 126 0 245 143 68 15 chr15 25958392 25958660 -75421861 + (TG)n Simple_repeat Simple_repeat 1 282 0 321 114 60 20 chr15 25958696 25958845 -75421676 + (TG)n Simple_repeat Simple_repeat 1 155 0 239 318 56 0 chr15 25959471 25959578 -75420943 + L1ME LINE L1 5615 5727 -394 3832 27 0 0 chr15 25959906 25960344 -75420177 - L1PA3 LINE L1 -7 6148 5711 982 9 0 0 chr15 25960344 25960451 -75420070 - U6 snRNA snRNA 0 107 1 22 0 0 0 chr15 25962012 25962034 -75418487 + AT_rich Low_complexity Low_complexity 1 22 0 2400 230 20 52 chr15 25962037 25962120 -75418401 - L1MA9 LINE L1 -38 6274 6190 474 65 0 0 chr15 25962120 25962182 -75418339 + (TA)n Simple_repeat Simple_repeat 1 62 0 2400 230 20 52 chr15 25962182 25962854 -75417667 - L1MA9 LINE L1 -122 6190 5543 9747 205 34 13 chr15 25962865 25965209 -75415312 - L1MA9 LINE L1 -743 5403 3011 1056 187 60 60 chr15 25965225 25965508 -75415013 + L1MD2 LINE L1 6075 6357 -2 2046 114 4 0 chr15 25965916 25966188 -75414333 - AluSg SINE Alu -8 302 30 357 82 0 0 chr15 25973171 25973220 -75407301 + (TG)n Simple_repeat Simple_repeat 1 49 0 6385 17 1 0 chr15 25973552 25974265 -75406256 + L1PA3 LINE L1 5442 6155 0 244 233 29 24 chr15 25975950 25976034 -75404487 - MIR SINE MIR -55 153 69 1642 167 7 24 chr15 25976086 25976380 -75404141 - AluJo SINE Alu -23 289 1 2114 190 28 2 chr15 25977212 25977648 -75402873 - L1 LINE L1 -2369 3777 3331 2180 84 7 7 chr15 25977651 25977948 -75402573 - AluY SINE Alu -10 301 5 369 43 0 0 chr15 25977959 25978006 -75402515 + (CA)n Simple_repeat Simple_repeat 2 48 0 22 56 0 0 chr15 25978103 25978139 -75402382 + GC_rich Low_complexity Low_complexity 1 36 0 1962 97 10 34 chr15 25979015 25979313 -75401208 + AluSq SINE Alu 1 291 -22 2058 86 0 95 chr15 25979314 25979651 -75400870 - AluSg SINE Alu -5 305 1 2355 68 0 10 chr15 25979834 25980160 -75400361 - AluY SINE Alu 0 311 1 1350 122 5 0 chr15 25980160 25980349 -75400172 + Charlie3 DNA MER1_type 2517 2706 -4 1304 146 5 0 chr15 25980351 25980571 -75399950 - L1MB3 LINE L1 -259 5924 5704 2067 130 0 3 chr15 25980646 25980931 -75399590 - AluSx SINE Alu -28 284 1 3655 202 44 20 chr15 25980931 25981891 -75398630 - L1MB3 LINE L1 -724 5460 4475 2425 86 0 0 chr15 25982142 25982445 -75398076 + AluY SINE Alu 1 303 -8 1680 155 17 24 chr15 25982582 25982872 -75397649 - AluJb SINE Alu -17 295 8 405 113 141 0 chr15 25983019 25983090 -75397431 - AluJ/FRAM SINE Alu -16 296 216 2039 85 0 0 chr15 25983356 25983603 -75396918 - AluSg SINE Alu -63 247 1 940 95 0 0 chr15 25984116 25984232 -75396289 + AluSq/x SINE Alu 1 116 -197 801 144 8 0 chr15 25984232 25984357 -75396164 + AluSc SINE Alu 166 291 -18 1165 155 5 0 chr15 25984357 25984544 -75395977 + AluSx SINE Alu 121 308 -4 252 299 41 0 chr15 25984642 25984739 -75395782 + MIR SINE MIR 92 192 -70 2457 86 0 13 chr15 25985715 25986030 -75394491 - AluY SINE Alu 0 311 1 1626 71 40 22 chr15 25986315 25986541 -75393980 + MER30 DNA MER1_type 1 230 0 972 155 42 237 chr15 25986632 25986782 -75393739 - L1MD3 LINE L1 -10 7985 7808 622 204 15 8 chr15 25986782 25986914 -75393607 + U8 snRNA snRNA 4 136 0 972 155 42 237 chr15 25986914 25987138 -75393383 - L1MD3 LINE L1 -187 7808 7542 195 42 0 0 chr15 25987138 25987162 -75393359 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 2003 110 0 0 chr15 25987163 25987426 -75393095 - AluSg SINE Alu -47 263 1 972 155 42 237 chr15 25987426 25987572 -75392949 - L1MD3 LINE L1 -258 7737 7564 328 279 38 51 chr15 25988044 25988202 -75392319 + L2 LINE L2 3158 3313 0 23 33 0 0 chr15 25988295 25988325 -75392196 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr15 25989089 25989117 -75391404 + AT_rich Low_complexity Low_complexity 1 28 0 2095 119 3 0 chr15 25990498 25990792 -75389729 + AluSq SINE Alu 19 313 0 24 67 0 0 chr15 25991423 25991468 -75389053 + AT_rich Low_complexity Low_complexity 1 45 0 827 150 0 15 chr15 25991773 25991906 -75388615 - FLAM_C SINE Alu -1 132 2 309 263 130 47 chr15 25992227 25992440 -75388081 + MIR SINE MIR 3 225 -37 1857 79 126 14 chr15 25992440 25992718 -75387803 - AluY SINE Alu -2 309 1 406 306 32 24 chr15 25993680 25993928 -75386593 - L1ME LINE L1 -400 5721 5472 241 173 0 0 chr15 25994011 25994063 -75386458 - L1MB3 LINE L1 -14 6169 6118 1770 95 0 9 chr15 25994063 25994294 -75386227 + AluY SINE Alu 68 296 -15 27311 103 14 10 chr15 25995612 25999554 -75380967 - L1P LINE L1 -2180 3966 11 406 272 38 46 chr15 25999565 25999804 -75380717 + L1M4 LINE L1 3725 3961 -2185 429 276 31 69 chr15 26000286 26000547 -75379974 + L1M4 LINE L1 4578 4828 -1318 1392 153 25 8 chr15 26000680 26000915 -75379606 + L1PA16 LINE L1 5919 6157 -9 876 153 7 0 chr15 26000923 26001098 -75379423 + FRAM SINE Alu 10 185 0 30 27 0 0 chr15 26003519 26003556 -75376965 + AT_rich Low_complexity Low_complexity 1 37 0 1668 180 3 23 chr15 26003557 26003862 -75376659 - AluJo SINE Alu -11 301 3 245 320 0 13 chr15 26004486 26004561 -75375960 + CT-rich Low_complexity Low_complexity 4 77 0 1643 202 85 50 chr15 26005580 26005669 -75374852 - MER74A LTR ERVL -24 534 450 2220 100 3 3 chr15 26005669 26005958 -75374563 + AluSg SINE Alu 1 289 -21 1643 202 85 50 chr15 26005958 26006384 -75374137 - MER74A LTR ERVL -108 450 1 2367 90 0 7 chr15 26006645 26006945 -75373576 + AluY SINE Alu 1 298 -13 413 179 11 42 chr15 26008382 26008477 -75372044 + MLT1A2 LTR MaLR 14 105 -269 820 237 17 23 chr15 26008485 26008658 -75371863 + MER21B LTR ERV1 12 183 -680 964 217 83 24 chr15 26008979 26009232 -75371289 - L1MB8 LINE L1 0 6178 5911 243 0 0 0 chr15 26009744 26009771 -75370750 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1497 182 28 21 chr15 26009775 26010066 -75370455 - AluJo SINE Alu -19 293 1 201 39 0 0 chr15 26010200 26010226 -75370295 + (CA)n Simple_repeat Simple_repeat 2 27 0 22 0 0 0 chr15 26011148 26011170 -75369351 + AT_rich Low_complexity Low_complexity 1 22 0 364 264 91 8 chr15 26012100 26012221 -75368300 - MIR3 SINE MIR -40 168 38 1830 164 12 84 chr15 26013664 26014078 -75366443 - MLT1B LTR MaLR -4 386 3 924 199 49 29 chr15 26014431 26014677 -75365844 - MLT1A1 LTR MaLR -16 349 99 3121 213 81 39 chr15 26014718 26015485 -75365036 - MER21B LTR ERV1 -53 810 12 413 179 11 42 chr15 26015493 26015588 -75364933 - MLT1A1 LTR MaLR -269 105 14 2254 109 0 13 chr15 26016446 26016748 -75363773 - AluSg SINE Alu -12 298 1 1066 147 0 40 chr15 26017768 26017945 -75362576 + FRAM SINE Alu 1 40 0 289 309 0 0 chr15 26019157 26019241 -75361280 + MIR3 SINE MIR 73 156 -52 480 230 111 15 chr15 26019858 26019993 -75360528 + MER58A DNA MER1_type 1 148 0 868 263 55 15 chr15 26020097 26020560 -75359961 - MER119 DNA MER1_type -1 582 5 183 146 122 0 chr15 26020585 26020626 -75359895 - MIR SINE MIR -69 139 94 204 40 0 0 chr15 26021955 26021980 -75358541 + (TTTTTA)n Simple_repeat Simple_repeat 6 30 0 1532 88 0 16 chr15 26022774 26022968 -75357553 - AluY SINE Alu -47 264 74 209 114 29 0 chr15 26023238 26023273 -75357248 + (TG)n Simple_repeat Simple_repeat 1 36 0 902 301 68 37 chr15 26023824 26024416 -75356105 - L1MC4a LINE L1 -1915 6153 5544 332 332 93 18 chr15 26025009 26025235 -75355286 - L1MC4a LINE L1 -1604 4802 4560 280 317 106 22 chr15 26025278 26025638 -75354883 - L1MC4a LINE L1 -1949 4457 4068 22 0 0 0 chr15 26025935 26025957 -75354564 + AT_rich Low_complexity Low_complexity 1 22 0 1383 171 95 29 chr15 26027020 26027212 -75353309 - L1MB3 LINE L1 -1 6182 5959 2163 131 0 3 chr15 26027212 26027518 -75353003 - AluSx SINE Alu -7 305 1 1383 171 95 29 chr15 26027518 26027641 -75352880 - L1MB3 LINE L1 -224 5959 5846 2126 99 16 59 chr15 26027645 26027968 -75352553 - AluSx SINE Alu -3 309 1 346 333 45 31 chr15 26027982 26028202 -75352319 - L1MC4a LINE L1 -3044 3362 3134 632 125 0 29 chr15 26028202 26028306 -75352215 - HY3 scRNA scRNA 0 101 1 346 333 45 31 chr15 26028306 26028442 -75352079 - L1MC4a LINE L1 -3272 3134 3001 2318 225 149 19 chr15 26028712 26029423 -75351098 - MER21B LTR ERV1 -31 832 40 437 205 13 0 chr15 26029462 26029540 -75350981 - MER21B LTR ERV1 -773 90 12 2283 99 0 0 chr15 26031931 26032224 -75348297 - AluSx SINE Alu -13 299 7 1770 168 36 0 chr15 26032229 26032538 -75347983 + MER44D DNA MER2_type 18 607 -2 2071 156 33 0 chr15 26033350 26033716 -75346805 + MLT1B LTR MaLR 2 379 -11 208 270 101 11 chr15 26033917 26034006 -75346515 - MIR SINE MIR -72 136 40 1140 121 0 0 chr15 26034222 26034379 -75346142 - AluSp SINE Alu -17 296 140 2234 117 0 0 chr15 26035111 26035411 -75345110 + AluSx SINE Alu 1 300 -12 28689 31 4 4 chr15 26036384 26042545 -75337976 + L1PA3 LINE L1 7 6155 0 1562 226 41 13 chr15 26042620 26043085 -75337436 - L1MC4a LINE L1 -5264 1145 668 546 266 172 10 chr15 26043117 26043519 -75337002 - L1MC4a LINE L1 -5934 475 9 1998 204 31 47 chr15 26044007 26044156 -75336365 + MER90 LTR ERV1 6 156 -458 2506 72 0 3 chr15 26044156 26044460 -75336061 + AluY SINE Alu 1 303 -8 1998 204 31 47 chr15 26044460 26044883 -75335638 + MER90 LTR ERV1 156 610 -4 2029 112 49 3 chr15 26045647 26045933 -75334588 - AluSx SINE Alu -13 299 1 241 145 72 58 chr15 26046281 26046350 -75334171 + MER53 DNA DNA 119 188 -1 1754 213 81 29 chr15 26047627 26048107 -75332414 - MLT1D LTR MaLR 0 505 1 208 320 102 31 chr15 26048325 26048453 -75332068 - MIR SINE MIR -35 227 91 378 229 35 83 chr15 26048771 26048885 -75331636 - MER5A DNA MER1_type -6 183 75 1776 139 40 7 chr15 26048885 26049201 -75331320 - AluY SINE Alu 0 326 2 378 229 35 83 chr15 26049201 26049229 -75331292 - MER5A DNA MER1_type -114 75 47 1869 118 129 26 chr15 26049272 26049612 -75330909 - THE1C LTR MaLR 0 375 1 2061 88 25 63 chr15 26051373 26051692 -75328829 + AluY SINE Alu 1 307 -4 332 265 131 29 chr15 26052592 26052837 -75327684 + L1MC4a LINE L1 970 1239 -4880 46 46 0 46 chr15 26052948 26053056 -75327465 + AT_rich Low_complexity Low_complexity 1 103 0 344 268 76 82 chr15 26053320 26053648 -75326873 + L1MC4a LINE L1 3613 3938 -2191 336 252 69 23 chr15 26054214 26054345 -75326176 - MLT1J1 LTR MaLR -167 279 143 1156 262 78 31 chr15 26054394 26054818 -75325703 - MLT1J1 LTR MaLR -2 444 1 7982 34 0 3 chr15 26054980 26056187 -75324334 + L1PA4 LINE L1 4951 6154 -1 748 211 79 152 chr15 26056278 26056503 -75324018 - MLT1A1 LTR MaLR 0 365 180 2189 138 76 15 chr15 26056503 26056844 -75323677 - THE1B LTR MaLR -2 362 1 748 211 79 152 chr15 26056844 26057012 -75323509 - MLT1A1 LTR MaLR -185 180 1 2307 173 38 26 chr15 26057069 26057496 -75323025 - MSTB1 LTR MaLR 0 432 1 1780 170 22 41 chr15 26057604 26057969 -75322552 + L1MB3 LINE L1 5798 6155 -28 21 57 0 0 chr15 26057977 26058012 -75322509 + AT_rich Low_complexity Low_complexity 1 35 0 308 292 49 49 chr15 26058237 26058463 -75322058 + L1MC4a LINE L1 4998 5223 -906 763 326 110 12 chr15 26058479 26059050 -75321471 + L1MC4a LINE L1 5239 5865 -1926 307 264 8 72 chr15 26059228 26059353 -75321168 - MLT1H LTR MaLR -238 311 195 271 308 54 32 chr15 26060347 26060532 -75319989 + ERVL LTR ERVL 514 702 -5062 781 334 46 13 chr15 26061012 26061421 -75319100 + ERVL LTR ERVL 2644 3111 -2638 2138 114 0 0 chr15 26061450 26061778 -75318743 + AluSg SINE Alu 1 328 0 1200 283 114 27 chr15 26061793 26062663 -75317858 + ERVL LTR ERVL 3229 4216 -1548 486 351 101 4 chr15 26062835 26063083 -75317438 + ERVL LTR ERVL 4769 5040 -724 1683 225 46 38 chr15 26063214 26063387 -75317134 + MLT1C LTR MaLR 3 173 -294 2416 71 7 0 chr15 26063387 26063684 -75316837 + AluY SINE Alu 1 299 -12 1683 225 46 38 chr15 26063684 26063963 -75316558 + MLT1C LTR MaLR 173 459 -8 411 266 0 9 chr15 26063967 26064076 -75316445 + ERVL LTR ERVL 5172 5279 -485 5900 132 20 28 chr15 26064198 26064220 -75316301 + MER49 LTR ERV1 1 22 -901 1843 136 0 74 chr15 26064220 26064543 -75315978 + AluSx SINE Alu 1 299 -13 5900 132 20 28 chr15 26064543 26065450 -75315071 + MER49 LTR ERV1 22 923 0 576 191 18 12 chr15 26066410 26066578 -75313943 + (TATATG)n Simple_repeat Simple_repeat 2 170 0 2275 115 3 0 chr15 26067881 26068186 -75312335 - AluSq SINE Alu -5 308 3 2262 104 0 7 chr15 26068197 26068505 -75312016 - AluY SINE Alu -5 306 1 21955 195 46 6 chr15 26069801 26073970 -75306551 - ERVL LTR ERVL -788 4976 550 3304 252 53 26 chr15 26074108 26075351 -75305170 + L1MC2 LINE L1 2626 3902 -2244 2000 143 181 8 chr15 26075351 26075716 -75304805 + MSTA LTR MaLR 1 428 0 9905 132 12 85 chr15 26075718 26077420 -75303101 + MSTA-int LTR MaLR 3 1580 0 403 113 238 0 chr15 26077420 26077500 -75303021 + MSTA LTR MaLR 1 99 -329 985 145 134 0 chr15 26077502 26077681 -75302840 + MSTA LTR MaLR 226 428 0 1294 253 6 10 chr15 26077681 26077993 -75302528 + L1MC2 LINE L1 3898 4208 -1938 1402 247 118 34 chr15 26077996 26078113 -75302408 - MLT1D LTR MaLR 0 505 399 2356 151 28 13 chr15 26078113 26078503 -75302018 + MSTD LTR MaLR 1 396 0 1402 247 118 34 chr15 26078503 26078851 -75301670 - MLT1D LTR MaLR -106 399 1 865 263 23 7 chr15 26078855 26079155 -75301366 + L1MC2 LINE L1 4211 4515 -1631 1043 327 86 22 chr15 26079170 26079862 -75300659 + L1MA9 LINE L1 106 770 -5185 423 245 71 71 chr15 26079927 26080082 -75300439 + L1MA9 LINE L1 635 789 -5166 11728 197 21 28 chr15 26080083 26082397 -75298124 + L1MA9 LINE L1 2544 4851 -1349 2176 99 0 38 chr15 26082397 26082711 -75297810 + AluSp SINE Alu 1 302 -11 11728 197 21 28 chr15 26082711 26083537 -75296984 + L1MA9 LINE L1 4851 5681 -519 306 160 20 120 chr15 26083563 26083663 -75296858 - L1MC4 LINE L1 -1339 6703 6614 301 233 35 23 chr15 26083600 26083686 -75296835 + L1MC4 LINE L1 6615 6701 -1341 * 2759 163 27 17 chr15 26083703 26084226 -75296295 + L1MA9 LINE L1 5673 6200 0 2951 206 73 10 chr15 26084230 26085221 -75295300 + L1MC2 LINE L1 4980 6034 -310 2795 98 40 10 chr15 26085222 26085622 -75294899 - L1MA2 LINE L1 0 6304 5893 796 171 76 0 chr15 26085657 26085815 -75294706 + L1MC3 LINE L1 7118 7287 -498 1453 213 53 36 chr15 26085818 26086042 -75294479 + L1MC3 LINE L1 7364 7600 -185 2397 75 3 0 chr15 26086042 26086336 -75294185 + AluSp SINE Alu 1 295 -18 1453 213 53 36 chr15 26086336 26086524 -75293997 + L1MC3 LINE L1 7600 7783 -2 240 244 134 12 chr15 26086570 26086652 -75293869 - LTR67 LTR ERVL -367 190 99 1010 230 8 28 chr15 26087054 26087302 -75293219 - LTR53 LTR ERVL -88 431 189 293 266 25 0 chr15 26089191 26089270 -75291251 + (CATATA)n Simple_repeat Simple_repeat 3 83 0 189 215 25 13 chr15 26089282 26089361 -75291160 + (TA)n Simple_repeat Simple_repeat 2 81 0 2649 29 7 3 chr15 26089398 26089705 -75290816 - AluY SINE Alu -3 308 1 212 359 26 0 chr15 26091761 26091839 -75288682 - L2 LINE L2 -553 2761 2682 2508 198 29 2 chr15 26092510 26092986 -75287535 - L1MB3 LINE L1 -2 6181 5693 397 343 18 24 chr15 26093172 26093341 -75287180 + MIR SINE MIR 88 255 -7 1527 150 108 119 chr15 26093679 26093958 -75286563 + MLT1C LTR MaLR 1 274 -193 2823 148 14 5 chr15 26093958 26094377 -75286144 - MSTB LTR MaLR 0 426 4 1527 150 108 119 chr15 26094377 26094569 -75285952 + MLT1C LTR MaLR 274 467 0 2120 121 3 7 chr15 26095542 26095840 -75284681 - AluSx SINE Alu -13 299 3 2554 44 0 0 chr15 26096186 26096482 -75284039 - AluY SINE Alu -14 297 2 24 32 0 0 chr15 26096717 26096748 -75283773 + AT_rich Low_complexity Low_complexity 1 31 0 7476 143 26 13 chr15 26097365 26098578 -75281943 - Tigger3b DNA MER2_type -3 1228 1 2208 114 13 0 chr15 26098798 26099226 -75281295 + AluSx SINE Alu 1 432 0 1096 47 0 0 chr15 26099261 26099388 -75281133 - L1PA2 LINE L1 -2 6153 6027 2185 78 0 31 chr15 26099672 26099993 -75280528 - AluY SINE Alu 0 311 1 2613 42 0 3 chr15 26100291 26100603 -75279918 - AluY SINE Alu 0 311 1 240 218 26 39 chr15 26100833 26100911 -75279610 + MIR SINE MIR 168 244 -18 618 300 91 72 chr15 26101027 26101788 -75278733 - L1MC4 LINE L1 -136 7906 7132 4521 210 63 38 chr15 26102066 26103647 -75276874 - L1MD2 LINE L1 -14 6345 4741 2601 122 29 67 chr15 26103679 26104129 -75276392 + Tigger2a DNA MER2_type 1 433 -1 1583 181 59 25 chr15 26104136 26104457 -75276064 + MER2 DNA MER2_type 1 332 -13 349 181 194 0 chr15 26104463 26104535 -75275986 + MER21B LTR ERV1 11 96 -767 3110 231 46 10 chr15 26104535 26105434 -75275087 - L1MD2 LINE L1 -2200 3946 3016 1674 251 116 27 chr15 26105407 26106733 -75273788 - L1MDa LINE L1 -2525 3690 1740 * 348 209 118 0 chr15 26106734 26106875 -75273646 - L1MDa LINE L1 -4636 1579 1339 2358 95 3 13 chr15 26106879 26107194 -75273327 - AluSp SINE Alu -1 312 1 1012 145 0 7 chr15 26107196 26107348 -75273173 - FRAM SINE Alu -5 171 21 742 197 8 0 chr15 26107588 26107715 -75272806 - FLAM_C SINE Alu -3 130 3 983 273 48 28 chr15 26107771 26108171 -75272350 - L1MDa LINE L1 -5631 765 358 260 226 10 78 chr15 26108217 26108319 -75272202 - L1MDa LINE L1 -6013 383 289 3270 130 35 0 chr15 26108370 26108879 -75271642 - Tigger1 DNA MER2_type -420 1998 1472 24 32 0 0 chr15 26109266 26109297 -75271224 + AT_rich Low_complexity Low_complexity 1 31 0 2132 189 13 30 chr15 26110365 26110762 -75269759 - MLT1B LTR MaLR 0 390 1 421 236 79 21 chr15 26111652 26111792 -75268729 + MER67A LTR ERV1 396 543 0 556 152 29 9 chr15 26112435 26112540 -75267981 - MLT1B LTR MaLR 0 374 268 590 215 55 140 chr15 26113094 26113387 -75267134 - MLT1B LTR MaLR -122 268 1 1044 280 151 44 chr15 26113463 26114287 -75266234 + HAL1 LINE L1 957 1868 -639 681 203 36 0 chr15 26114505 26114643 -75265878 + MER5A DNA MER1_type 22 164 -25 263 242 61 53 chr15 26114530 26114662 -75265859 - MER5A DNA MER1_type -35 154 22 * 713 244 23 0 chr15 26114672 26114848 -75265673 + MER58A DNA MER1_type 45 224 0 13744 102 109 17 chr15 26115660 26115868 -75264653 - L1PBa LINE L1 -3752 3110 2923 1787 150 44 7 chr15 26115868 26116161 -75264360 - AluSx SINE Alu -8 304 1 13744 102 109 17 chr15 26116161 26116172 -75264349 - L1PBa LINE L1 -3939 2923 2914 2185 66 27 40 chr15 26116172 26116473 -75264048 - AluY SINE Alu -14 297 1 13744 102 109 17 chr15 26116473 26118516 -75262005 - L1PBa LINE L1 -3948 2914 634 1109 155 26 0 chr15 26118516 26118709 -75261812 - L1PBa LINE L1 -6663 200 3 729 94 0 0 chr15 26119367 26119463 -75261058 - LOR1a LTR ERV1 -401 96 1 993 108 28 34 chr15 26119463 26119639 -75260882 - L1MB4 LINE L1 -317 5863 5689 699 151 60 12 chr15 26119646 26119781 -75260740 - L1MB4 LINE L1 -711 5463 5315 2147 108 10 3 chr15 26119781 26120078 -75260443 - AluSx SINE Alu -13 299 1 699 151 60 12 chr15 26120078 26120109 -75260412 - L1MB4 LINE L1 -859 5315 5287 2034 114 3 17 chr15 26120491 26120789 -75259732 + AluSq SINE Alu 12 305 -8 691 170 44 11 chr15 26120791 26121057 -75259464 + L1MA9 LINE L1 5942 6312 0 24 0 0 0 chr15 26121060 26121084 -75259437 + AT_rich Low_complexity Low_complexity 1 24 0 3211 203 12 9 chr15 26121168 26121852 -75258669 + L1 LINE L1 3832 4517 -1629 271 319 60 9 chr15 26122581 26122697 -75257824 - MIR SINE MIR -56 152 31 1640 198 3 13 chr15 26122705 26123008 -75257513 + AluJo SINE Alu 1 300 -12 704 133 0 0 chr15 26123012 26123110 -75257411 - AluSg/x SINE Alu -10 300 203 2017 148 3 3 chr15 26123611 26123908 -75256613 - AluSx SINE Alu -15 297 1 32 0 0 0 chr15 26124295 26124327 -75256194 + AT_rich Low_complexity Low_complexity 1 32 0 1232 279 99 25 chr15 26124455 26124939 -75255582 + MLT1E LTR MaLR 1 520 -73 11683 28 0 0 chr15 26125039 26127104 -75253417 + L1PA3 LINE L1 4090 6155 0 2488 77 0 0 chr15 26127126 26127437 -75253084 + AluY SINE Alu 1 311 0 205 306 16 0 chr15 26128413 26128475 -75252046 - L2 LINE L2 -219 3053 2991 339 91 73 0 chr15 26128479 26128534 -75251987 + L1MB1 LINE L1 5789 5847 -342 228 356 30 15 chr15 26128999 26129131 -75251390 - MLT1I LTR MaLR -40 369 236 429 277 106 0 chr15 26129923 26130064 -75250457 - L1ME LINE L1 -484 5669 5514 2012 208 59 13 chr15 26130099 26130571 -75249950 - L1PA15 LINE L1 -1411 4735 4242 * 4117 212 23 37 chr15 26130566 26132027 -75248494 + L1PA15 LINE L1 4731 6164 -1 1011 286 58 25 chr15 26132036 26132754 -75247767 - L1ME LINE L1 -694 5453 4713 1782 141 10 47 chr15 26132807 26133104 -75247417 + AluJo SINE Alu 3 288 -24 784 112 5 53 chr15 26133131 26133319 -75247202 + (GAAA)n Simple_repeat Simple_repeat 1 179 0 1983 194 29 0 chr15 26133326 26133707 -75246814 + L1MA8 LINE L1 5894 6285 -6 2198 99 41 0 chr15 26133716 26134010 -75246511 + AluSp SINE Alu 1 306 -7 2910 56 0 6 chr15 26134018 26134360 -75246161 + L1PA8 LINE L1 5825 6164 -8 3038 233 74 26 chr15 26134495 26135439 -75245082 - L1MC3 LINE L1 -8 7777 6789 521 238 105 68 chr15 26135413 26135661 -75244860 - L1ME LINE L1 -1978 4151 3895 * 190 260 78 39 chr15 26136577 26136654 -75243867 - MIR SINE MIR -113 149 70 248 302 0 0 chr15 26136831 26136894 -75243627 - MIR SINE MIR 0 262 200 2161 115 0 7 chr15 26136921 26137216 -75243305 + AluSx SINE Alu 1 293 -19 261 254 231 6 chr15 26137356 26137529 -75242992 - MLT1I LTR MaLR -197 212 1 413 259 14 58 chr15 26137546 26137685 -75242836 - MIR SINE MIR -58 150 18 2142 89 11 0 chr15 26137691 26137997 -75242524 - AluSp SINE Alu 0 309 1 313 183 0 0 chr15 26138001 26138061 -75242460 - L1MA8 LINE L1 0 6291 6232 2953 183 29 11 chr15 26138095 26138648 -75241873 - L1MA8 LINE L1 -47 6244 5682 216 282 150 77 chr15 26138703 26138923 -75241598 - MIR SINE MIR -21 241 6 336 337 10 10 chr15 26139081 26139182 -75241339 - MER91B DNA MER1_type 0 190 90 289 343 9 9 chr15 26139199 26139304 -75241217 - MER91B DNA MER1_type -61 129 25 390 340 125 24 chr15 26139684 26139972 -75240549 + L3 LINE CR1 733 1049 -528 29791 39 34 3 chr15 26140612 26144452 -75236069 + L1P LINE L1 1 3961 -2185 379 287 30 43 chr15 26144589 26144753 -75235768 - L1ME LINE L1 -2775 3354 3193 21 36 0 0 chr15 26144756 26144784 -75235737 + AT_rich Low_complexity Low_complexity 1 28 0 341 214 22 0 chr15 26144857 26144946 -75235575 - L1MC5 LINE L1 -72 7889 7799 2232 124 7 0 chr15 26145049 26145356 -75235165 - AluSx SINE Alu -3 309 1 532 332 84 8 chr15 26145433 26145683 -75234838 + L2 LINE L2 3045 3313 0 735 169 11 56 chr15 26146179 26146357 -75234164 - MER77 LTR ERV1 -20 585 416 * 1120 165 30 121 chr15 26146356 26146653 -75233868 - MER77 LTR ERV1 -335 270 1 393 290 65 0 chr15 26146653 26146777 -75233744 - L1M4 LINE L1 -1442 5406 5275 317 342 97 15 chr15 26147047 26147243 -75233278 - L1M4 LINE L1 -2532 4316 4105 511 234 69 58 chr15 26147287 26147475 -75233046 + MLT1F LTR MaLR 163 352 -190 189 0 0 0 chr15 26147475 26147496 -75233025 + (T)n Simple_repeat Simple_repeat 1 21 0 206 191 48 0 chr15 26147880 26147922 -75232599 - MIR SINE MIR -116 146 103 361 263 98 103 chr15 26148148 26148700 -75231821 - L1M4 LINE L1 -5516 1333 785 48 72 0 0 chr15 26150364 26150461 -75230060 + GC_rich Low_complexity Low_complexity 1 97 0 28 29 0 0 chr15 26150477 26150512 -75230009 + GC_rich Low_complexity Low_complexity 1 35 0 27 35 0 0 chr15 26150714 26150743 -75229778 + GC_rich Low_complexity Low_complexity 1 29 0 597 259 33 24 chr15 26150771 26150983 -75229538 + MLT1F LTR MaLR 329 542 0 365 247 111 74 chr15 26151035 26151225 -75229296 - L1ME LINE L1 -3283 2846 2650 486 349 72 16 chr15 26151309 26151613 -75228908 - L1ME LINE L1 -3670 2459 2139 1274 202 55 2 chr15 26151613 26152005 -75228516 - LTR53 LTR ERVL -12 507 8 630 254 88 111 chr15 26152465 26152898 -75227623 + LTR16A LTR ERVL 8 430 -20 318 353 31 36 chr15 26152905 26153129 -75227392 - L1ME LINE L1 -5524 595 373 294 293 104 6 chr15 26153259 26153423 -75227098 - L1ME LINE L1 -5926 193 14 377 195 81 0 chr15 26154128 26154215 -75226306 + MLT1F1 LTR MaLR 474 567 0 1709 198 29 3 chr15 26158737 26159086 -75221435 + MLT2D LTR ERVL 1 358 -56 200 146 0 42 chr15 26159155 26159203 -75221318 + (CATATA)n Simple_repeat Simple_repeat 2 47 0 343 102 0 0 chr15 26159233 26159282 -75221239 + MLT2D LTR ERVL 349 397 0 246 255 0 0 chr15 26160095 26160139 -75220382 + CT-rich Low_complexity Low_complexity 1 47 -4 2263 117 3 0 chr15 26160139 26160439 -75220082 - AluSx SINE Alu -11 301 1 687 325 60 39 chr15 26160506 26160974 -75219547 - L2 LINE L2 0 3313 2836 201 94 0 0 chr15 26161459 26161491 -75219030 + (CAAAA)n Simple_repeat Simple_repeat 3 34 0 410 330 53 15 chr15 26161520 26161726 -75218795 - L1M4 LINE L1 -2712 3434 3221 245 250 31 0 chr15 26161733 26161797 -75218724 - L1M4 LINE L1 -2562 3584 3519 21 0 0 0 chr15 26161810 26161831 -75218690 + AT_rich Low_complexity Low_complexity 1 21 0 2050 124 0 20 chr15 26161841 26162140 -75218381 + AluSx SINE Alu 1 293 -19 270 0 0 0 chr15 26162270 26162300 -75218221 + (TTAA)n Simple_repeat Simple_repeat 3 32 0 1999 105 4 15 chr15 26162300 26162439 -75218082 - AluSc SINE Alu -27 282 146 2330 102 0 7 chr15 26162439 26162743 -75217778 - AluSg1 SINE Alu -7 302 1 1999 105 4 15 chr15 26162743 26162870 -75217651 - AluSc SINE Alu -163 146 19 325 294 98 34 chr15 26162879 26163114 -75217407 - LTR33 LTR ERVL -8 513 264 305 250 0 81 chr15 26163186 26163310 -75217211 - LTR33 LTR ERVL -407 114 1 548 324 32 55 chr15 26163488 26163741 -75216780 + HAL1 LINE L1 1162 1408 -1099 348 313 137 27 chr15 26163716 26163972 -75216549 + L1M4 LINE L1 4412 4695 -1451 * 4352 264 66 39 chr15 26164713 26166274 -75214247 + L1M3c LINE L1 1 1518 -4692 1506 153 4 0 chr15 26166274 26166509 -75214012 + MER46A DNA MER2_type 1 236 0 4352 264 66 39 chr15 26166509 26167418 -75213103 + L1M3c LINE L1 1518 2401 -3809 279 0 0 0 chr15 26167418 26167449 -75213072 + (CA)n Simple_repeat Simple_repeat 2 32 0 4352 264 66 39 chr15 26167449 26168198 -75212323 + L1M3c LINE L1 2401 3128 -3082 2158 130 0 0 chr15 26168198 26168517 -75212004 + AluSx SINE Alu 1 319 0 4352 264 66 39 chr15 26168517 26169046 -75211475 + L1M3c LINE L1 3128 3598 -2612 1534 112 0 0 chr15 26169046 26169243 -75211278 + AluSx SINE Alu 1 197 -115 4352 264 66 39 chr15 26169243 26169489 -75211032 + L1M3c LINE L1 3598 3836 -2374 1279 201 81 24 chr15 26169489 26169835 -75210686 - MSTB2 LTR MaLR -68 379 24 1307 196 159 20 chr15 26169993 26170339 -75210182 + MSTD LTR MaLR 1 394 -2 22 35 0 0 chr15 26170954 26170983 -75209538 + AT_rich Low_complexity Low_complexity 1 29 0 2242 70 0 0 chr15 26172040 26172311 -75208210 - AluSc SINE Alu -9 300 30 199 259 35 17 chr15 26172314 26172372 -75208149 + MER5A DNA MER1_type 128 186 -3 316 68 0 0 chr15 26173032 26173082 -75207439 + MLT2A2 LTR ERVL 1 43 -410 537 82 0 14 chr15 26173199 26173272 -75207249 - AluSq/x SINE Alu -167 145 74 251 175 48 32 chr15 26174088 26174151 -75206370 + C-rich Low_complexity Low_complexity 2 65 0 378 206 7 174 chr15 26174241 26174340 -75206181 + MIR SINE MIR 22 87 -175 186 43 0 0 chr15 26174340 26174363 -75206158 + (TTTC)n Simple_repeat Simple_repeat 2 24 0 378 206 7 174 chr15 26174363 26174418 -75206103 + MIR SINE MIR 87 150 -112 279 0 0 0 chr15 26174811 26174842 -75205679 + (T)n Simple_repeat Simple_repeat 1 31 0 214 197 0 30 chr15 26176440 26176506 -75204015 + G-rich Low_complexity Low_complexity 5 68 0 239 79 26 0 chr15 26177569 26177607 -75202914 + (GA)n Simple_repeat Simple_repeat 2 40 0 238 212 150 53 chr15 26178502 26178615 -75201906 + MIR3 SINE MIR 1 124 -84 464 271 17 0 chr15 26178840 26178958 -75201563 + MIR3 SINE MIR 74 193 -15 300 295 216 48 chr15 26179241 26179468 -75201053 - L3b LINE CR1 -28 1555 1291 424 253 84 45 chr15 26179508 26179662 -75200859 + MIR3 SINE MIR 37 196 -12 559 287 85 49 chr15 26179793 26180040 -75200481 + MIR SINE MIR 3 258 -4 210 37 0 0 chr15 26180164 26180191 -75200330 + (TC)n Simple_repeat Simple_repeat 2 28 0 454 272 44 7 chr15 26180501 26180637 -75199884 + MIR3 SINE MIR 61 201 -7 512 273 15 8 chr15 26180793 26180925 -75199596 + MIR SINE MIR 16 148 -114 520 283 31 13 chr15 26181412 26181571 -75198950 - MIR3 SINE MIR -27 181 20 277 365 10 0 chr15 26181594 26181690 -75198831 + L3b LINE CR1 1290 1386 -197 330 281 144 27 chr15 26181700 26181846 -75198675 - MIR3 SINE MIR -42 166 4 210 313 0 0 chr15 26182292 26182359 -75198162 + L3b LINE CR1 1326 1392 -191 4335 31 2 4 chr15 26182743 26183262 -75197259 + L1PA4 LINE L1 5638 6155 0 223 333 26 0 chr15 26183613 26183691 -75196830 + L3b LINE CR1 1319 1398 -185 1120 151 0 6 chr15 26184325 26184491 -75196030 - AluJb SINE Alu -24 288 124 180 0 0 0 chr15 26184503 26184523 -75195998 + (TTTTTG)n Simple_repeat Simple_repeat 3 22 0 935 127 0 8 chr15 26184527 26184661 -75195860 - AluJb SINE Alu -179 133 1 803 260 49 29 chr15 26184721 26184967 -75195554 + MIR SINE MIR 2 252 -10 181 311 53 73 chr15 26185053 26185204 -75195317 + MIR3 SINE MIR 1 148 -60 183 149 255 0 chr15 26186119 26186166 -75194355 - MIR SINE MIR -64 144 86 265 307 118 26 chr15 26186472 26186625 -75193896 + MIR SINE MIR 18 184 -78 3029 171 11 4 chr15 26186633 26187181 -75193340 - L1MB7 LINE L1 0 6184 5633 2428 90 3 0 chr15 26187194 26187494 -75193027 - AluSp SINE Alu -12 301 1 685 240 47 42 chr15 26187526 26187718 -75192803 - MIR SINE MIR -34 228 36 199 284 95 0 chr15 26187746 26187820 -75192701 + MIR SINE MIR 176 256 -6 373 274 83 19 chr15 26187986 26188143 -75192378 + MIR3 SINE MIR 42 208 0 453 343 71 10 chr15 26188804 26189020 -75191501 - MIR SINE MIR -20 242 16 613 352 9 13 chr15 26189874 26190104 -75190417 - L3 LINE CR1 -3 1574 1346 277 241 103 43 chr15 26190694 26190810 -75189711 + MIR SINE MIR 20 143 -65 908 175 0 2 chr15 26192054 26192237 -75188284 - AluJo SINE Alu -95 217 3 190 277 92 15 chr15 26192270 26192335 -75188186 + MIR3 SINE MIR 93 162 -46 650 235 56 17 chr15 26192820 26192999 -75187522 - MIR SINE MIR -54 208 23 249 184 224 20 chr15 26193599 26193697 -75186824 + MIR SINE MIR 113 230 -32 235 247 185 0 chr15 26193961 26194042 -75186479 + L2 LINE L2 3139 3234 -38 362 306 125 18 chr15 26194859 26195078 -75185443 - MIR SINE MIR -6 256 6 1603 89 171 4 chr15 26195156 26195413 -75185108 + AluJo SINE Alu 1 300 -2 280 299 65 60 chr15 26197252 26197453 -75183068 + MIR3 SINE MIR 2 203 -5 1759 167 0 3 chr15 26198678 26198978 -75181543 + AluJo SINE Alu 1 299 -13 363 250 85 80 chr15 26200250 26200438 -75180083 + MIR SINE MIR 31 219 -43 379 262 27 86 chr15 26200601 26200788 -75179733 + MER5A DNA MER1_type 7 182 -7 348 243 97 10 chr15 26201228 26201331 -75179190 + MIR3 SINE MIR 11 122 -86 317 43 21 0 chr15 26201854 26201901 -75178620 + (CA)n Simple_repeat Simple_repeat 2 49 0 1555 117 12 4 chr15 26202144 26202391 -75178130 + AluSx SINE Alu 52 300 -12 2322 128 113 18 chr15 26202688 26203079 -75177442 - MSTA LTR MaLR 0 428 1 292 291 196 24 chr15 26203088 26203384 -75177137 - L2 LINE L2 -348 2966 2620 497 135 11 0 chr15 26203754 26203843 -75176678 + (TG)n Simple_repeat Simple_repeat 1 90 0 234 293 73 49 chr15 26204315 26204438 -75176083 - L2 LINE L2 -2141 1173 1048 477 283 280 7 chr15 26204518 26204946 -75175575 - L2 LINE L2 -340 2974 2430 569 320 51 22 chr15 26205287 26205704 -75174817 + L2 LINE L2 2654 3083 -189 372 43 0 0 chr15 26205831 26205877 -75174644 + (TGAA)n Simple_repeat Simple_repeat 1 46 0 342 310 158 19 chr15 26206336 26206559 -75173962 - MIR SINE MIR -6 256 4 3847 164 60 172 chr15 26206676 26206918 -75173603 + L1MB7 LINE L1 3988 4255 -1923 204 40 0 0 chr15 26206918 26206943 -75173578 + (CA)n Simple_repeat Simple_repeat 2 26 0 3847 164 60 172 chr15 26206943 26206966 -75173555 + L1MB7 LINE L1 4255 4279 -1899 2121 131 0 0 chr15 26206966 26207278 -75173243 + AluSx SINE Alu 1 312 0 3847 164 60 172 chr15 26207278 26207672 -75172849 + L1MB7 LINE L1 4279 4716 -1462 1853 148 7 0 chr15 26207672 26207976 -75172545 + AluJb SINE Alu 1 306 -6 3847 164 60 172 chr15 26207976 26208306 -75172215 + L1MB7 LINE L1 4716 5081 -1097 1078 188 5 0 chr15 26208306 26208498 -75172023 + AluJb SINE Alu 96 288 -24 3847 164 60 172 chr15 26208498 26208705 -75171816 + L1MB7 LINE L1 5081 5154 -1024 2119 114 0 10 chr15 26208705 26209011 -75171510 + AluSq SINE Alu 1 303 -10 3847 164 60 172 chr15 26209011 26209323 -75171198 + L1MB7 LINE L1 5154 5499 -679 * 5965 36 0 0 chr15 26209320 26210020 -75170501 - L1PA4 LINE L1 -1441 4705 4006 7601 33 3 1 chr15 26210020 26211472 -75169049 + L1PA4 LINE L1 4702 6155 0 3190 132 61 78 chr15 26211474 26211778 -75168743 + L1MB7 LINE L1 5494 5802 -382 1761 155 7 0 chr15 26211778 26212074 -75168447 + AluJo SINE Alu 1 298 -14 3190 132 61 78 chr15 26212074 26212472 -75168049 + L1MB7 LINE L1 5802 6184 0 188 219 49 0 chr15 26213081 26213122 -75167399 - L2 LINE L2 -6 3307 3265 403 243 29 10 chr15 26213298 26213416 -75167105 + L1ME LINE L1 5714 5823 -304 749 284 60 0 chr15 26214013 26214228 -75166293 + MIR SINE MIR 5 232 -30 330 183 11 53 chr15 26214240 26214333 -75166188 - FRAM SINE Alu -68 98 41 246 189 0 0 chr15 26214359 26214396 -75166125 - Alu SINE Alu -12 121 85 1477 175 3 21 chr15 26215597 26215882 -75164639 + AluJo SINE Alu 10 289 -23 303 251 34 19 chr15 26215928 26216035 -75164486 + MIR3 SINE MIR 59 170 -38 294 29 0 0 chr15 26218044 26218079 -75162442 + (CA)n Simple_repeat Simple_repeat 1 35 0 24 32 0 0 chr15 26220223 26220254 -75160267 + AT_rich Low_complexity Low_complexity 1 31 0 846 97 24 16 chr15 26221143 26221267 -75159254 - AluY SINE Alu -186 125 1 1901 181 109 5 chr15 26221703 26222124 -75158397 + MLT1C LTR MaLR 3 467 0 397 159 0 29 chr15 26223151 26223220 -75157301 + MLT1A1 LTR MaLR 1 67 -298 1014 189 0 0 chr15 26223224 26223393 -75157128 + MLT1A1 LTR MaLR 197 365 0 198 167 0 0 chr15 26223844 26223880 -75156641 + CT-rich Low_complexity Low_complexity 1 36 0 2292 107 0 0 chr15 26223881 26224191 -75156330 - AluSg SINE Alu 0 310 1 257 95 0 71 chr15 26224931 26224973 -75155548 - LTR57 LTR ERVL -75 336 298 620 251 84 15 chr15 26225055 26225258 -75155263 + L2 LINE L2 2949 3165 -148 229 309 32 41 chr15 26225308 26225431 -75155090 - L2 LINE L2 -10 3303 3182 3983 172 23 32 chr15 26225727 26226333 -75154188 + LTR39 LTR ERV1 1 600 -183 2081 128 3 0 chr15 26226333 26226639 -75153882 - AluSx SINE Alu -5 307 1 3983 172 23 32 chr15 26226639 26226822 -75153699 + LTR39 LTR ERV1 600 783 0 397 213 71 8 chr15 26227050 26227178 -75153343 - L1ME3A LINE L1 -241 5925 5791 516 283 126 12 chr15 26227180 26227427 -75153094 - L1ME3A LINE L1 -404 5758 5484 347 308 145 6 chr15 26227465 26227637 -75152884 - L1ME3A LINE L1 -2190 3956 3761 475 250 37 82 chr15 26227637 26228039 -75152482 - L1MC4 LINE L1 -412 7630 7224 892 184 58 34 chr15 26228221 26228428 -75152093 - AluJo SINE Alu -19 293 82 185 148 0 0 chr15 26228460 26228487 -75152034 - MIR SINE MIR -14 248 222 448 198 22 11 chr15 26228489 26228580 -75151941 - AluJo SINE Alu -219 93 2 2028 113 7 0 chr15 26228758 26229049 -75151472 + AluSq SINE Alu 1 293 -20 428 262 35 95 chr15 26229051 26229509 -75151012 + L1MC5 LINE L1 6555 7072 -821 * 729 263 24 12 chr15 26229503 26229784 -75150737 + L1MC4a LINE L1 6968 7214 -636 581 218 144 108 chr15 26229933 26230580 -75149941 + L1MC5 LINE L1 7260 7929 -32 6804 206 67 5 chr15 26230749 26232294 -75148227 + L1 LINE L1 3592 5232 -914 356 296 82 15 chr15 26232844 26232979 -75147542 + L1MB4 LINE L1 3638 3781 -2365 364 288 68 25 chr15 26233047 26233210 -75147311 + MLT1J LTR MaLR 342 511 0 291 299 92 24 chr15 26233210 26233417 -75147104 + L1MB4 LINE L1 3861 4081 -2065 387 215 161 44 chr15 26233671 26233945 -75146576 + L1MB4 LINE L1 4524 4829 -1317 251 260 27 0 chr15 26233989 26234062 -75146459 + MLT1L LTR MaLR 3 77 -538 438 172 0 33 chr15 26234613 26234735 -75145786 + GA-rich Low_complexity Low_complexity 1 118 0 2013 109 10 0 chr15 26235019 26235312 -75145209 + AluSx SINE Alu 1 296 -16 1004 157 79 28 chr15 26235489 26235945 -75144576 + L1MB4 LINE L1 5190 5863 -317 3313 138 0 6 chr15 26235945 26236445 -75144076 + LOR1a LTR ERV1 1 497 0 1122 183 38 8 chr15 26236445 26236685 -75143836 + L1MB4 LINE L1 5922 6168 -12 246 260 53 91 chr15 26236785 26237050 -75143471 + L1ME LINE L1 5485 5739 -382 6537 164 38 4 chr15 26237229 26239482 -75141039 + L1PBa LINE L1 1680 4009 -2853 22 0 0 0 chr15 26239639 26239661 -75140860 + AT_rich Low_complexity Low_complexity 1 22 0 464 261 73 42 chr15 26240623 26240788 -75139733 - L2 LINE L2 0 3313 3144 807 156 32 219 chr15 26241255 26241401 -75139120 + L1MD3 LINE L1 7564 7609 -386 2048 126 0 0 chr15 26241401 26241702 -75138819 + AluSg SINE Alu 1 301 -9 807 156 32 219 chr15 26241702 26241902 -75138619 + L1MD3 LINE L1 7609 7845 -150 366 236 22 0 chr15 26241932 26242021 -75138500 - U8 snRNA snRNA -8 128 38 893 182 40 45 chr15 26243598 26243774 -75136747 - MER20 DNA MER1_type 0 219 45 2512 64 0 3 chr15 26244507 26244819 -75135702 - AluY SINE Alu 0 311 1 367 283 91 43 chr15 26244858 26245045 -75135476 + MIR SINE MIR 36 231 -31 582 240 93 97 chr15 26245508 26245704 -75134817 - MIR SINE MIR -5 257 61 2302 51 3 37 chr15 26245704 26245999 -75134522 + AluY SINE Alu 5 289 -22 582 240 93 97 chr15 26245999 26246060 -75134461 - MIR SINE MIR -201 61 1 186 343 90 0 chr15 26246905 26246972 -75133549 + L2 LINE L2 3208 3280 -33 1025 179 66 0 chr15 26247236 26247448 -75133073 + AluJb SINE Alu 1 226 -86 336 214 0 14 chr15 26248049 26248119 -75132402 - MER8 DNA MER2_type -170 69 1 299 247 137 71 chr15 26248559 26248784 -75131737 - MIR SINE MIR -28 234 3 884 143 0 15 chr15 26249102 26249235 -75131286 + FLAM_C SINE Alu 2 132 -1 23 33 0 0 chr15 26249302 26249332 -75131189 + AT_rich Low_complexity Low_complexity 1 30 0 24 0 0 0 chr15 26249452 26249476 -75131045 + AT_rich Low_complexity Low_complexity 1 24 0 38 22 0 0 chr15 26249536 26249581 -75130940 + AT_rich Low_complexity Low_complexity 1 45 0 2134 97 4 0 chr15 26250210 26250510 -75130011 - AluSq SINE Alu 0 303 3 841 68 25 17 chr15 26250524 26250642 -75129879 - AluY SINE Alu -15 296 178 1273 252 83 50 chr15 26252638 26253218 -75127303 + L1ME1 LINE L1 823 1421 -4988 4215 241 66 22 chr15 26253331 26253647 -75126874 + L1ME1 LINE L1 4180 4481 -1945 234 0 0 0 chr15 26253647 26253673 -75126848 + (CA)n Simple_repeat Simple_repeat 2 27 0 4215 241 66 22 chr15 26253673 26255019 -75125502 + L1ME1 LINE L1 4481 5952 -474 2163 102 13 29 chr15 26255019 26255334 -75125187 + AluSg SINE Alu 1 310 0 4215 241 66 22 chr15 26255334 26255811 -75124710 + L1ME1 LINE L1 5952 6407 -19 351 347 67 22 chr15 26255942 26256169 -75124352 - MIR SINE MIR -14 248 4 380 164 14 14 chr15 26258221 26258294 -75122227 + Tigger5 DNA MER2_type 2251 2323 0 378 195 49 0 chr15 26258344 26258426 -75122095 + Tigger5 DNA MER2_type 2238 2323 0 323 302 30 86 chr15 26259070 26259433 -75121088 + L1 LINE L1 3370 3693 -2453 1879 136 4 0 chr15 26259433 26259706 -75120815 + L1PA15 LINE L1 5892 6165 0 323 302 30 86 chr15 26259706 26259899 -75120622 + L1 LINE L1 3693 3895 -2251 4146 100 35 7 chr15 26259971 26260453 -75120068 + L1P4 LINE L1 4721 5188 -980 2630 45 0 13 chr15 26260453 26260762 -75119759 - AluY SINE Alu -6 305 1 4146 100 35 7 chr15 26260762 26261317 -75119204 + L1P4 LINE L1 5188 5781 -387 3835 230 82 8 chr15 26261327 26262726 -75117795 + L1PBa LINE L1 36 1682 -5181 666 189 8 16 chr15 26262851 26262973 -75117548 - FLAM_C SINE Alu -12 121 1 2138 129 0 13 chr15 26263029 26263339 -75117182 + AluSx SINE Alu 1 306 -6 237 333 0 24 chr15 26263563 26263647 -75116874 + L3b LINE CR1 1272 1353 -230 200 317 24 81 chr15 26263728 26263851 -75116670 - L2 LINE L2 -2 3270 3155 2014 141 3 0 chr15 26263852 26264143 -75116378 + AluSx SINE Alu 1 292 -20 284 104 0 21 chr15 26264685 26264733 -75115788 - MADE1 DNA Mariner 0 80 34 493 286 104 10 chr15 26265390 26265582 -75114939 - L2 LINE L2 0 3313 3104 460 171 13 0 chr15 26265633 26265709 -75114812 - MER33 DNA MER1_type -246 78 2 2200 99 0 3 chr15 26267919 26268233 -75112288 + AluY SINE Alu 1 313 0 1196 174 15 0 chr15 26268488 26268683 -75111838 - AluJo SINE Alu -111 201 4 7022 215 69 12 chr15 26268925 26269835 -75110686 - L1MD1 LINE L1 -336 5906 5049 216 0 0 0 chr15 26269835 26269859 -75110662 + (TTTC)n Simple_repeat Simple_repeat 3 26 0 7022 215 69 12 chr15 26269859 26271515 -75109006 - L1MD1 LINE L1 -1193 5049 3196 2553 211 42 24 chr15 26271505 26272132 -75108389 - L1MC4a LINE L1 -12 7796 7159 * 222 258 0 0 chr15 26272310 26272372 -75108149 + GA-rich Low_complexity Low_complexity 1 62 0 2621 53 0 0 chr15 26273515 26273818 -75106703 + AluY SINE Alu 1 303 -8 673 216 40 0 chr15 26274328 26274476 -75106045 - MER5A DNA MER1_type -35 154 1 22 0 0 0 chr15 26274737 26274759 -75105762 + AT_rich Low_complexity Low_complexity 1 22 0 231 303 91 24 chr15 26275108 26275273 -75105248 + MIR SINE MIR 76 251 -11 1691 164 34 17 chr15 26277570 26277863 -75102658 - L1PB3 LINE L1 -2 6152 5855 2155 138 0 0 chr15 26278566 26278871 -75101650 + AluSx SINE Alu 5 309 -3 373 293 123 98 chr15 26278871 26279212 -75101309 + L1MEd LINE L1 64 422 -5697 2083 137 0 3 chr15 26279212 26279518 -75101003 - AluSg1 SINE Alu -4 305 1 373 293 123 98 chr15 26279518 26279664 -75100857 + L1MEd LINE L1 422 563 -5556 311 275 225 14 chr15 26279676 26279814 -75100707 + L1ME LINE L1 138 304 -5901 2338 212 95 95 chr15 26280450 26281327 -75099194 + L1MD2 LINE L1 5049 5915 -327 2210 128 77 8 chr15 26281327 26281678 -75098843 - THE1C LTR MaLR 0 375 1 2338 212 95 95 chr15 26281678 26281999 -75098522 + L1MD2 LINE L1 5915 6234 -8 1376 259 67 117 chr15 26281997 26282914 -75097607 + L1ME LINE L1 1062 2023 -4373 * 1841 148 16 16 chr15 26282914 26283219 -75097302 - AluSx SINE Alu -3 309 5 1376 259 67 117 chr15 26283219 26283418 -75097103 + L1ME LINE L1 2023 2104 -4292 624 98 87 0 chr15 26283418 26283510 -75097011 + HY3 scRNA scRNA 1 100 -1 1376 259 67 117 chr15 26283510 26283723 -75096798 + L1ME LINE L1 2104 2326 -4070 1851 115 29 48 chr15 26283727 26283863 -75096658 + AluSx SINE Alu 6 143 -169 2161 99 6 10 chr15 26283863 26284175 -75096346 + AluY SINE Alu 1 311 0 1851 115 29 48 chr15 26284175 26284350 -75096171 + AluSx SINE Alu 143 311 -1 1120 117 47 12 chr15 26284355 26284526 -75095995 + AluSg/x SINE Alu 129 305 -7 1678 263 93 21 chr15 26284529 26285290 -75095231 + L1ME LINE L1 2284 3099 -3116 1418 180 11 27 chr15 26285359 26285620 -75094901 + AluSx SINE Alu 3 259 -53 213 263 40 0 chr15 26285798 26285874 -75094647 + MIR SINE MIR 158 236 -26 434 263 249 37 chr15 26286024 26286321 -75094200 + L2 LINE L2 2912 3271 -1 5401 172 7 0 chr15 26286726 26287680 -75092841 + L1P LINE L1 4336 5296 -850 2409 73 0 3 chr15 26288415 26288716 -75091805 - AluY SINE Alu -11 300 1 1262 195 43 14 chr15 26289092 26289630 -75090891 + LTR1B LTR ERV1 233 826 0 180 111 0 0 chr15 26289671 26289698 -75090823 + (TCTA)n Simple_repeat Simple_repeat 4 30 0 261 108 0 0 chr15 26289703 26289740 -75090781 + MLT2B2 LTR ERVL 479 515 0 873 229 10 5 chr15 26289740 26289945 -75090576 + HERVL-B2 LTR ERVL 1 206 -5448 1531 187 63 3 chr15 26290015 26290299 -75090222 + HERVL-B2 LTR ERVL 380 680 -5084 1463 127 17 68 chr15 26290301 26290593 -75089928 - LTR23 LTR ERV1 0 437 161 589 200 82 0 chr15 26290671 26290806 -75089715 - LTR23 LTR ERV1 -291 146 1 1194 167 14 5 chr15 26290831 26291052 -75089469 + HERVL-B2 LTR ERVL 679 901 -4863 1973 254 43 42 chr15 26291190 26291401 -75089120 - L1M4 LINE L1 -2465 3681 3472 2413 79 0 3 chr15 26291401 26291705 -75088816 + AluY SINE Alu 1 303 -8 1973 254 43 42 chr15 26291705 26292299 -75088222 - L1M4 LINE L1 -2674 3472 2875 1813 253 33 33 chr15 26292289 26292895 -75087626 - L1MCb LINE L1 -4882 1163 558 * 448 274 111 66 chr15 26292978 26293204 -75087317 - L1MCb LINE L1 -5481 564 329 378 269 39 70 chr15 26293218 26293374 -75087147 - L1MCb LINE L1 -5789 256 106 * 932 268 48 70 chr15 26293365 26293960 -75086561 - MER21B LTR ERV1 -137 726 142 1552 127 5 0 chr15 26294395 26294608 -75085913 + AluSg/x SINE Alu 68 281 -29 3759 74 6 4 chr15 26294609 26295098 -75085423 + LTR2B LTR ERV1 1 490 0 432 37 0 0 chr15 26295099 26295153 -75085368 + (CATAA)n Simple_repeat Simple_repeat 1 54 0 1627 216 35 0 chr15 26295154 26295496 -75085025 - ERVL LTR ERVL -4360 1404 1051 569 86 250 23 chr15 26295516 26295644 -75084877 - MER4C LTR ERV1 -18 447 291 245 32 0 210 chr15 26295703 26295765 -75084756 - MER4A LTR ERV1 -310 354 306 1405 153 63 39 chr15 26295773 26296107 -75084414 - MER4A LTR ERV1 -322 342 1 487 181 211 0 chr15 26296107 26296240 -75084281 - ERVL LTR ERVL -4711 1053 893 888 55 55 0 chr15 26296243 26296371 -75084150 + MER30 DNA MER1_type 4 138 -92 2254 81 7 0 chr15 26296371 26296655 -75083866 - AluY SINE Alu -17 294 9 979 158 0 19 chr15 26298470 26298651 -75081870 - FRAM SINE Alu 0 176 1 192 120 20 60 chr15 26298660 26298710 -75081811 - MIR SINE MIR -108 154 107 1347 137 5 0 chr15 26298757 26298962 -75081559 + L1MC1 LINE L1 6122 6327 -6 186 43 0 0 chr15 26299431 26299454 -75081067 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1777 151 4 0 chr15 26299459 26299737 -75080784 - AluSx SINE Alu -33 279 1 240 221 122 28 chr15 26299792 26299924 -75080597 - MIR SINE MIR -59 203 53 567 255 82 10 chr15 26301088 26301296 -75079225 - L1ME3 LINE L1 -201 5961 5739 254 238 62 0 chr15 26301304 26301384 -75079137 - L1ME3 LINE L1 -536 5634 5550 2550 68 0 0 chr15 26301533 26301843 -75078678 + AluY SINE Alu 1 310 -1 307 228 43 0 chr15 26302158 26302250 -75078271 + L1M4 LINE L1 3863 3958 -2188 579 196 43 0 chr15 26302257 26302395 -75078126 + L1MC1 LINE L1 6128 6271 -62 500 149 33 66 chr15 26302395 26302502 -75078019 + L1MC1 LINE L1 6206 6322 -11 2051 124 0 7 chr15 26302508 26302821 -75077700 + AluSc SINE Alu 1 311 0 2296 78 0 13 chr15 26302847 26303154 -75077367 + AluY SINE Alu 1 303 -8 2410 55 0 19 chr15 26304087 26304397 -75076124 + AluY SINE Alu 1 304 -7 2371 67 3 3 chr15 26305035 26305332 -75075189 - AluY SINE Alu -14 297 1 1622 172 62 14 chr15 26305997 26306287 -75074234 - AluJo SINE Alu -7 305 2 330 298 143 53 chr15 26306303 26306568 -75073953 - L1M4 LINE L1 -1984 4162 3874 1720 156 4 7 chr15 26307080 26307349 -75073172 - AluJo SINE Alu -43 269 2 21 0 0 0 chr15 26307358 26307379 -75073142 + AT_rich Low_complexity Low_complexity 1 21 0 1815 180 3 7 chr15 26307797 26308103 -75072418 - AluJo SINE Alu -7 305 1 2161 119 10 0 chr15 26308160 26308454 -75072067 + AluSx SINE Alu 5 301 -11 574 296 66 22 chr15 26310565 26310647 -75069874 - L1MEd LINE L1 -840 1650 1573 2617 121 45 17 chr15 26310647 26311069 -75069452 - MER57B LTR ERV1 0 434 1 574 296 66 22 chr15 26311069 26311607 -75068914 - L1MEd LINE L1 -917 1573 913 22 0 0 0 chr15 26311616 26311638 -75068883 + AT_rich Low_complexity Low_complexity 1 22 0 2271 65 45 3 chr15 26311697 26311988 -75068533 - AluY SINE Alu -8 303 1 3185 232 112 30 chr15 26312150 26313763 -75066758 + L1MDb LINE L1 6 1740 -4666 256 105 175 0 chr15 26313857 26313914 -75066607 + MLT2B2 LTR ERVL 49 115 -405 1696 213 28 14 chr15 26313981 26314338 -75066183 + MLT2B2 LTR ERVL 100 461 -54 631 99 10 0 chr15 26314393 26314494 -75066027 + LTR1B LTR ERV1 1 102 -724 2048 100 0 31 chr15 26314600 26314890 -75065631 + AluY SINE Alu 18 298 -13 775 221 110 28 chr15 26315920 26316237 -75064284 - LTR37A LTR ERV1 0 426 84 185 81 0 54 chr15 26316576 26316613 -75063908 + (TATATG)n Simple_repeat Simple_repeat 2 36 0 2216 86 0 0 chr15 26317884 26318204 -75062317 + AluSg SINE Alu 2 321 0 663 246 40 6 chr15 26318435 26318610 -75061911 - MIR SINE MIR -31 231 51 2359 54 0 0 chr15 26318744 26319023 -75061498 + AluY SINE Alu 1 279 -32 233 29 29 0 chr15 26319023 26319057 -75061464 + (TAAAA)n Simple_repeat Simple_repeat 1 35 0 2062 138 0 0 chr15 26319818 26320116 -75060405 + AluSx SINE Alu 3 300 -12 253 216 0 20 chr15 26320116 26320167 -75060354 + L2 LINE L2 3264 3313 0 29 47 0 0 chr15 26320206 26320249 -75060272 + AT_rich Low_complexity Low_complexity 1 43 0 245 173 77 0 chr15 26320649 26320701 -75059820 - L1ME4a LINE L1 -72 6049 5994 454 294 18 12 chr15 26320711 26320874 -75059647 + (CATATA)n Simple_repeat Simple_repeat 3 166 0 2204 109 3 10 chr15 26320934 26321245 -75059276 + AluSx SINE Alu 1 309 -3 425 199 352 0 chr15 26321245 26321461 -75059060 - L1ME4a LINE L1 -303 5818 5527 827 277 139 16 chr15 26321802 26322737 -75057784 + L1ME LINE L1 4487 5543 -745 2364 96 0 3 chr15 26322742 26323044 -75057477 - AluSx SINE Alu -11 301 1 384 272 217 11 chr15 26323178 26323358 -75057163 + L1ME LINE L1 5602 5818 -303 583 103 0 0 chr15 26323415 26323502 -75057019 + L1MA3 LINE L1 6219 6305 0 24 0 0 0 chr15 26323543 26323567 -75056954 + AT_rich Low_complexity Low_complexity 1 24 0 2169 85 0 85 chr15 26323623 26323952 -75056569 - AluSx SINE Alu -11 301 1 1487 182 26 77 chr15 26324569 26324960 -75055561 + MLT1A2 LTR MaLR 4 374 0 2351 94 0 0 chr15 26325316 26325613 -75054908 + AluSg1 SINE Alu 1 297 -12 696 110 9 0 chr15 26325755 26325864 -75054657 + MLT1B LTR MaLR 63 172 -218 2290 90 0 7 chr15 26325869 26326169 -75054352 + AluY SINE Alu 1 298 -13 238 208 130 0 chr15 26326191 26326268 -75054253 + L1 LINE L1 4750 4836 -1310 592 293 27 40 chr15 26326745 26327073 -75053448 - L1MC4 LINE L1 0 8042 7719 667 218 77 0 chr15 26327289 26327459 -75053062 - MER5A DNA MER1_type -2 187 5 1815 112 8 4 chr15 26327639 26327889 -75052632 + AluSx SINE Alu 1 251 -61 461 31 0 16 chr15 26327904 26327968 -75052553 + (TAAA)n Simple_repeat Simple_repeat 2 64 0 611 223 97 24 chr15 26328276 26328482 -75052039 + MLT1J LTR MaLR 291 511 0 236 246 80 7 chr15 26329227 26329365 -75051156 - L1P5 LINE L1 -711 5443 5296 1531 137 17 0 chr15 26329418 26329834 -75050687 + AluSp SINE Alu 76 495 0 259 346 185 0 chr15 26330191 26330321 -75050200 + MIR3 SINE MIR 53 206 -2 182 378 92 0 chr15 26330657 26330776 -75049745 + MER5B DNA MER1_type 17 146 -32 450 342 0 12 chr15 26330979 26331315 -75049206 + GA-rich Low_complexity Low_complexity 1 331 0 1275 153 54 5 chr15 26331443 26331690 -75048831 + L1PB4 LINE L1 5905 6151 0 2247 75 0 0 chr15 26331694 26332010 -75048511 + AluY SINE Alu 1 316 0 559 307 103 16 chr15 26332354 26332732 -75047789 - L1ME4a LINE L1 -2 6119 5709 284 330 79 41 chr15 26332738 26333236 -75047285 + L2 LINE L2 2766 3289 -24 189 243 108 40 chr15 26333774 26333848 -75046673 + MIR SINE MIR 184 262 0 1928 144 25 25 chr15 26333928 26334288 -75046233 + MLT1A1 LTR MaLR 6 365 0 3220 171 84 0 chr15 26334350 26335017 -75045504 + L1MB7 LINE L1 5404 6126 -58 348 161 0 0 chr15 26335018 26335080 -75045441 + (CATATA)n Simple_repeat Simple_repeat 3 64 0 361 189 0 63 chr15 26335081 26335176 -75045345 - L1MC4 LINE L1 -1339 6703 6615 2339 98 0 19 chr15 26335228 26335545 -75044976 + AluSp SINE Alu 1 311 -2 2200 112 13 13 chr15 26336036 26336340 -75044181 + AluSx SINE Alu 1 304 -8 21 36 0 0 chr15 26336431 26336459 -75044062 + AT_rich Low_complexity Low_complexity 1 28 0 679 200 8 8 chr15 26336471 26336596 -75043925 + FLAM_C SINE Alu 3 127 -16 24 0 0 0 chr15 26336688 26336712 -75043809 + AT_rich Low_complexity Low_complexity 1 24 0 326 236 27 45 chr15 26337038 26337148 -75043373 + L1ME4a LINE L1 5743 5850 -271 2307 88 3 0 chr15 26337156 26337452 -75043069 + AluSp SINE Alu 1 297 -16 2228 103 0 0 chr15 26337625 26337926 -75042595 + AluY SINE Alu 1 301 -10 21 0 0 0 chr15 26338158 26338179 -75042342 + AT_rich Low_complexity Low_complexity 1 21 0 32 26 0 0 chr15 26338481 26338520 -75042001 + AT_rich Low_complexity Low_complexity 1 39 0 506 279 139 103 chr15 26339504 26340545 -75039976 + L1M2 LINE L1 509 1405 -5444 447 90 0 15 chr15 26341406 26341473 -75039048 - Alu SINE Alu -244 66 1 408 194 21 0 chr15 26342071 26342164 -75038357 - MER103 DNA DNA -21 145 51 312 275 18 37 chr15 26342210 26342319 -75038202 + MER5C DNA MER1_type 18 124 -200 1370 130 189 53 chr15 26342781 26343025 -75037496 + MER47A DNA MER2_type 1 210 -2113 207 0 0 0 chr15 26343025 26343048 -75037473 + (TTTAA)n Simple_repeat Simple_repeat 3 25 0 2105 111 3 7 chr15 26343052 26343340 -75037181 - AluSp SINE Alu -26 287 1 1370 130 189 53 chr15 26343340 26343412 -75037109 + MER47A DNA MER2_type 212 366 0 2234 73 38 0 chr15 26344212 26344501 -75036020 - AluY SINE Alu -7 304 5 369 109 0 0 chr15 26344505 26344560 -75035961 + (T)n Simple_repeat Simple_repeat 1 55 0 21 89 0 0 chr15 26345086 26345142 -75035379 + AT_rich Low_complexity Low_complexity 1 56 0 28 0 0 0 chr15 26345419 26345447 -75035074 + AT_rich Low_complexity Low_complexity 1 28 0 24 67 0 0 chr15 26345704 26345749 -75034772 + AT_rich Low_complexity Low_complexity 1 45 0 198 232 143 0 chr15 26346876 26346932 -75033589 + MIR SINE MIR 106 169 -93 1307 160 12 78 chr15 26347188 26347402 -75033119 - AluJo SINE Alu -2 310 124 1746 114 28 41 chr15 26347402 26347692 -75032829 + AluSp SINE Alu 2 287 -26 1307 160 12 78 chr15 26347692 26347809 -75032712 - AluJo SINE Alu -188 124 1 1649 135 14 17 chr15 26347843 26348140 -75032381 + AluSp SINE Alu 5 300 -13 563 196 9 0 chr15 26348140 26348252 -75032269 - AluJb SINE Alu -198 114 2 1587 139 23 16 chr15 26348287 26348590 -75031931 + AluSp SINE Alu 5 309 -4 288 136 0 0 chr15 26348590 26348634 -75031887 - AluJb SINE Alu -188 114 71 * 1512 226 91 39 chr15 26348625 26349064 -75031457 + MLT1D LTR MaLR 44 505 0 1758 194 28 33 chr15 26349603 26349999 -75030522 - L1MB2 LINE L1 0 6171 5778 381 43 0 0 chr15 26349999 26350046 -75030475 + (TTTA)n Simple_repeat Simple_repeat 3 49 0 836 168 14 0 chr15 26350046 26350189 -75030332 - AluJb SINE Alu -30 282 138 1627 156 19 16 chr15 26350672 26350980 -75029541 - L1MB7 LINE L1 0 6184 5876 26 30 0 0 chr15 26354011 26354044 -75026477 + AT_rich Low_complexity Low_complexity 1 33 0 580 204 138 13 chr15 26354087 26354239 -75026282 - MIR SINE MIR -64 198 28 1916 109 13 33 chr15 26354392 26354695 -75025826 - AluSx SINE Alu -13 299 3 327 49 0 0 chr15 26355859 26355900 -75024621 + (TG)n Simple_repeat Simple_repeat 2 42 0 275 204 0 0 chr15 26355912 26355961 -75024560 + MIR SINE MIR 184 232 -30 921 249 127 33 chr15 26355991 26356505 -75024016 - HAL1 LINE L1 -877 1630 1069 606 236 126 95 chr15 26356506 26356981 -75023540 - MLT1H1 LTR MaLR 0 555 66 582 229 151 28 chr15 26357048 26357266 -75023255 - HAL1 LINE L1 -1437 1070 826 2134 112 3 3 chr15 26357272 26357575 -75022946 - AluSp SINE Alu -10 303 1 1756 138 10 31 chr15 26357639 26357967 -75022554 + AluJo SINE Alu 1 322 0 235 290 93 65 chr15 26358241 26358531 -75021990 - HAL1 LINE L1 -2167 340 43 901 217 37 28 chr15 26358914 26359131 -75021390 + MER20 DNA MER1_type 1 219 0 2278 63 0 20 chr15 26359261 26359562 -75020959 + AluY SINE Alu 5 299 -12 465 274 195 39 chr15 26359663 26359970 -75020551 - L1M4 LINE L1 -2884 3262 2908 270 0 0 0 chr15 26360000 26360030 -75020491 + (TTAA)n Simple_repeat Simple_repeat 1 30 0 2004 118 7 0 chr15 26360030 26360309 -75020212 - AluY SINE Alu -27 284 1 396 251 99 41 chr15 26362967 26362990 -75017531 + MIR SINE MIR 12 32 -230 2106 99 7 3 chr15 26362990 26363283 -75017238 + AluY SINE Alu 1 294 -17 396 251 99 41 chr15 26363283 26363430 -75017091 + MIR SINE MIR 32 192 -70 277 343 131 0 chr15 26364360 26364497 -75016024 + MIR3 SINE MIR 31 185 -23 333 241 78 26 chr15 26364516 26364632 -75015889 + L2 LINE L2 3146 3267 -5 230 173 58 0 chr15 26365968 26366020 -75014501 + L1MC4a LINE L1 5885 5939 -1869 282 56 0 0 chr15 26366023 26366059 -75014462 + (TG)n Simple_repeat Simple_repeat 2 37 0 507 255 160 25 chr15 26366255 26366455 -75014066 + MIR SINE MIR 26 252 -10 185 250 231 0 chr15 26367046 26367098 -75013423 + MIR SINE MIR 88 151 -111 1806 145 0 26 chr15 26368537 26368840 -75011681 + AluSx SINE Alu 3 297 -15 267 287 189 0 chr15 26368857 26368979 -75011542 + MIR SINE MIR 48 192 -70 862 175 0 18 chr15 26369686 26369852 -75010669 + 7SLRNA srpRNA srpRNA 95 257 -63 261 57 0 0 chr15 26370977 26371012 -75009509 + (TGGGGG)n Simple_repeat Simple_repeat 6 40 0 782 104 9 0 chr15 26373449 26373555 -75006966 - AluSq/x SINE Alu -205 107 1 592 143 0 17 chr15 26373851 26373970 -75006551 + (TTCC)n Simple_repeat Simple_repeat 1 117 0 2101 118 0 7 chr15 26373971 26374277 -75006244 - AluSx SINE Alu -8 304 1 355 295 47 118 chr15 26374298 26374432 -75006089 - HAL1 LINE L1 -1210 1297 1155 2747 139 98 7 chr15 26374432 26374973 -75005548 - L1MB7 LINE L1 -16 6168 5579 1233 135 14 19 chr15 26374974 26375189 -75005332 - L1PA13 LINE L1 0 6163 5950 355 295 47 118 chr15 26375189 26375432 -75005089 - HAL1 LINE L1 -1351 1156 945 300 325 67 33 chr15 26375576 26375606 -75004915 - HAL1 LINE L1 -1586 921 893 2540 7 0 0 chr15 26375606 26375887 -75004634 - AluYa5 SINE Alu -9 302 22 300 325 67 33 chr15 26375887 26375976 -75004545 - HAL1 LINE L1 -1614 893 798 229 282 0 0 chr15 26376786 26376857 -75003664 + T-rich Low_complexity Low_complexity 1 71 0 837 154 6 82 chr15 26376908 26377090 -75003431 - AluJo SINE Alu -144 168 1 2252 94 0 3 chr15 26377133 26377440 -75003081 - AluSx SINE Alu -4 308 3 354 300 87 33 chr15 26378254 26378404 -75002117 - L2 LINE L2 0 3313 3156 331 321 89 30 chr15 26378479 26378647 -75001874 - MIR SINE MIR 0 262 85 430 270 57 0 chr15 26378680 26378696 -75001825 - MER3 DNA MER1_type 6 168 154 1664 170 49 0 chr15 26378696 26378984 -75001537 + AluJb SINE Alu 1 302 -10 430 270 57 0 chr15 26378984 26379126 -75001395 - MER3 DNA MER1_type -8 154 1 1161 159 15 0 chr15 26379530 26379725 -75000796 + AluJo SINE Alu 4 201 -111 305 326 126 23 chr15 26382000 26382175 -74998346 + L1MEd LINE L1 908 1100 -5019 450 189 14 0 chr15 26382189 26382263 -74998258 + MER33 DNA MER1_type 4 78 -246 539 285 104 10 chr15 26382312 26382505 -74998016 + L2 LINE L2 3103 3313 0 235 149 0 21 chr15 26383150 26383197 -74997324 + MADE1 DNA Mariner 34 79 -1 238 288 16 114 chr15 26383691 26383705 -74996816 + L2 LINE L2 2896 2910 -362 1860 130 0 18 chr15 26383705 26384025 -74996496 - AluSx SINE Alu 0 320 6 238 288 16 114 chr15 26384025 26384193 -74996328 + L2 LINE L2 2910 3061 -211 1233 179 0 17 chr15 26384565 26384799 -74995722 + AluSg/x SINE Alu 83 312 0 273 149 23 11 chr15 26385197 26385284 -74995237 + (TG)n Simple_repeat Simple_repeat 1 88 0 2328 74 0 3 chr15 26385653 26385964 -74994557 + AluY SINE Alu 1 310 -1 2460 52 0 13 chr15 26386396 26386703 -74993818 + AluY SINE Alu 1 303 -8 528 267 172 49 chr15 26386742 26387104 -74993417 - L1 LINE L1 -2834 3312 2922 1943 122 10 0 chr15 26387139 26387460 -74993061 - AluY SINE Alu 0 311 1 386 257 99 41 chr15 26390123 26390146 -74990375 + MIR SINE MIR 12 32 -230 2227 94 7 0 chr15 26390146 26390444 -74990077 + AluY SINE Alu 1 300 -11 386 257 99 41 chr15 26390444 26390591 -74989930 + MIR SINE MIR 32 192 -70 286 336 131 0 chr15 26391522 26391659 -74988862 + MIR3 SINE MIR 31 185 -23 339 278 70 17 chr15 26391679 26391794 -74988727 + L2 LINE L2 3188 3308 -5 230 149 40 81 chr15 26393138 26393191 -74987330 + L1MC4a LINE L1 5885 5936 -1872 384 22 0 0 chr15 26393191 26393236 -74987285 + (TG)n Simple_repeat Simple_repeat 1 45 0 230 149 40 81 chr15 26393236 26393256 -74987265 + L1MC4a LINE L1 5936 5955 -1853 507 255 160 25 chr15 26393432 26393632 -74986889 + MIR SINE MIR 26 252 -10 184 250 231 0 chr15 26394223 26394275 -74986246 + MIR SINE MIR 88 151 -111 1815 140 0 39 chr15 26395710 26396018 -74984503 + AluSx SINE Alu 2 297 -15 267 287 189 0 chr15 26396035 26396157 -74984364 + MIR SINE MIR 48 192 -70 911 163 0 18 chr15 26396842 26397008 -74983513 + 7SLRNA srpRNA srpRNA 95 257 -63 207 69 0 0 chr15 26398130 26398159 -74982362 + (TGGGGG)n Simple_repeat Simple_repeat 6 34 0 22 35 0 0 chr15 26401495 26401524 -74978997 + AT_rich Low_complexity Low_complexity 1 29 0 258 54 54 0 chr15 26402193 26402230 -74978291 - MER5A DNA MER1_type -77 112 74 2187 60 3 13 chr15 26402234 26402533 -74977988 - AluY SINE Alu -15 296 1 302 196 0 0 chr15 26402548 26402594 -74977927 + Tigger3(Golem) DNA MER2_type 4 49 -2980 847 124 0 0 chr15 26402598 26402719 -74977802 - Tigger3(Golem) DNA MER2_type -746 2283 2163 396 198 10 79 chr15 26402716 26402817 -74977704 - Tigger3(Golem) DNA MER2_type -2869 160 67 * 2212 80 3 13 chr15 26402817 26403130 -74977391 - AluY SINE Alu -1 310 1 231 37 0 0 chr15 26403131 26403158 -74977363 - Tigger3(Golem) DNA MER2_type -2947 82 56 * 3950 126 68 26 chr15 26403156 26403219 -74977302 + Tigger3(Golem) DNA MER2_type 2276 2335 -693 1794 168 0 3 chr15 26403219 26403522 -74976999 - AluJb SINE Alu -10 302 1 3950 126 68 26 chr15 26403522 26403910 -74976611 + Tigger3(Golem) DNA MER2_type 2335 2771 -257 2252 101 3 0 chr15 26403910 26404217 -74976304 + AluSc SINE Alu 1 308 -1 3950 126 68 26 chr15 26404217 26404486 -74976035 + Tigger3(Golem) DNA MER2_type 2771 3027 -1 862 297 93 13 chr15 26404575 26404972 -74975549 - LTR16A LTR ERVL -6 444 16 2314 43 4 0 chr15 26405098 26405398 -74975123 + AluY SINE Alu 1 301 0 1887 113 0 0 chr15 26405854 26406111 -74974410 + AluSx SINE Alu 1 257 -55 363 197 197 16 chr15 26406568 26406695 -74973826 - L1MC4a LINE L1 -1883 5925 5776 * 1406 253 63 15 chr15 26406692 26406749 -74973772 + L1MC/D LINE L1 5377 5430 -2378 2041 122 0 0 chr15 26406749 26407045 -74973476 + AluSx SINE Alu 1 296 -16 1406 253 63 15 chr15 26407045 26407383 -74973138 + L1MC/D LINE L1 5430 5791 -2017 24 53 0 0 chr15 26407614 26407652 -74972869 + AT_rich Low_complexity Low_complexity 1 38 0 2246 94 0 0 chr15 26407735 26408042 -74972479 + AluSg1 SINE Alu 1 307 -2 202 263 288 12 chr15 26408548 26408628 -74971893 + L2 LINE L2 3162 3263 -9 295 283 123 47 chr15 26408763 26408869 -74971652 - L2 LINE L2 0 3313 3200 1730 133 24 7 chr15 26410047 26410341 -74970180 + AluJb SINE Alu 7 305 -7 922 268 106 19 chr15 26410737 26411152 -74969369 - L2 LINE L2 -1122 2192 1742 684 231 0 8 chr15 26411781 26411915 -74968606 + FLAM_A SINE Alu 1 133 0 204 311 171 12 chr15 26413792 26413956 -74966565 - L2 LINE L2 -527 2787 2598 1926 145 0 0 chr15 26414057 26414347 -74966174 - AluSx SINE Alu -11 301 12 352 266 22 144 chr15 26414377 26414513 -74966008 - HAL1 LINE L1 -1208 1299 1148 2763 137 98 7 chr15 26414513 26415054 -74965467 - L1MB7 LINE L1 -16 6168 5579 1233 135 14 19 chr15 26415055 26415270 -74965251 - L1PA13 LINE L1 0 6163 5950 352 266 22 144 chr15 26415270 26415450 -74965071 - HAL1 LINE L1 -1358 1149 1020 209 57 29 0 chr15 26416618 26416653 -74963868 + (TTA)n Simple_repeat Simple_repeat 1 36 0 812 169 6 62 chr15 26416702 26416880 -74963641 - AluJb SINE Alu -144 168 1 1949 114 4 4 chr15 26416925 26417226 -74963295 - AluSx SINE Alu 0 303 3 1816 164 0 3 chr15 26417486 26417790 -74962731 - AluSx SINE Alu -9 303 1 22 88 0 0 chr15 26418509 26418566 -74961955 + AT_rich Low_complexity Low_complexity 1 57 0 378 0 0 0 chr15 26419641 26419683 -74960838 + (TG)n Simple_repeat Simple_repeat 2 43 0 188 283 38 0 chr15 26419979 26420032 -74960489 - L3 LINE CR1 -390 1187 1133 204 284 208 30 chr15 26420118 26420354 -74960167 - L3 LINE CR1 -588 989 712 25 0 0 0 chr15 26420784 26420809 -74959712 + AT_rich Low_complexity Low_complexity 1 25 0 2078 120 0 13 chr15 26421008 26421309 -74959212 - AluSq SINE Alu -16 297 1 2014 133 3 0 chr15 26421384 26421685 -74958836 - AluSx SINE Alu -10 302 1 2442 120 0 5 chr15 26421857 26422225 -74958296 + L1PB1 LINE L1 5783 6148 -3 2720 84 28 5 chr15 26422231 26422622 -74957899 + L1PA10 LINE L1 5768 6167 -1 204 40 0 0 chr15 26422624 26422649 -74957872 + (TG)n Simple_repeat Simple_repeat 2 26 0 384 328 38 29 chr15 26422657 26422971 -74957550 + L1 LINE L1 4015 4331 -1815 3216 230 80 45 chr15 26423101 26424421 -74956100 + L1MC5 LINE L1 6551 7927 -34 310 322 138 20 chr15 26425851 26426003 -74954518 - MIR SINE MIR -71 191 22 848 236 14 10 chr15 26426256 26426464 -74954057 - MER96B DNA MER1_type? -208 209 1 266 0 0 29 chr15 26426787 26426822 -74953699 + (TTTA)n Simple_repeat Simple_repeat 3 36 0 1729 120 3 57 chr15 26426835 26427134 -74953387 - AluSq SINE Alu -30 283 1 588 256 172 0 chr15 26427625 26427828 -74952693 - MIR SINE MIR -4 258 21 2151 85 10 23 chr15 26428215 26428522 -74951999 + AluY SINE Alu 1 303 -8 979 248 18 5 chr15 26429311 26429529 -74950992 - MER58A DNA MER1_type -2 222 2 449 292 0 52 chr15 26430080 26430367 -74950154 + GA-rich Low_complexity Low_complexity 1 272 0 30 27 0 0 chr15 26431107 26431144 -74949377 + AT_rich Low_complexity Low_complexity 1 37 0 1876 97 104 0 chr15 26431155 26431424 -74949097 + AluSx SINE Alu 1 297 -15 1890 136 3 7 chr15 26432055 26432357 -74948164 - AluSx SINE Alu -11 301 1 460 167 52 0 chr15 26432379 26432475 -74948046 - L1ME2 LINE L1 -4 6160 6060 228 88 29 0 chr15 26432481 26432515 -74948006 - MER3 DNA MER1_type -160 49 15 364 304 59 59 chr15 26433707 26433911 -74946610 + MLT1L LTR MaLR 5 208 -407 304 343 22 7 chr15 26434761 26434898 -74945623 - L2 LINE L2 -926 2388 2250 407 233 52 9 chr15 26436113 26436229 -74944292 - MIR3 SINE MIR -36 172 52 352 286 164 0 chr15 26437093 26437233 -74943288 - MER5A DNA MER1_type -26 163 1 290 261 112 8 chr15 26437266 26437400 -74943121 - MIR SINE MIR -94 168 21 2040 130 0 0 chr15 26438921 26439222 -74941299 + AluSx SINE Alu 1 301 -11 1918 123 0 19 chr15 26439445 26439753 -74940768 + AluY SINE Alu 1 302 -9 509 316 66 13 chr15 26440116 26440344 -74940177 + MIR SINE MIR 13 252 -10 245 317 0 49 chr15 26440345 26440487 -74940034 + L1 LINE L1 3702 3836 -2310 709 219 26 0 chr15 26440514 26440669 -74939852 - AluJb SINE Alu -17 295 137 308 294 17 26 chr15 26440685 26440808 -74939713 + L1 LINE L1 4020 4141 -2005 1707 164 0 26 chr15 26440920 26441245 -74939276 + AluSx SINE Alu 1 312 0 2061 199 91 117 chr15 26441521 26442098 -74938423 - L1MC4a LINE L1 -946 6862 6312 1441 72 111 5 chr15 26442098 26442306 -74938215 + MER30 DNA MER1_type 1 230 0 2061 199 91 117 chr15 26442306 26442568 -74937953 - L1MC4a LINE L1 -1496 6312 6045 527 268 89 89 chr15 26442613 26442721 -74937800 - MIR SINE MIR -14 248 141 1647 117 0 0 chr15 26442721 26442952 -74937569 - AluSx SINE Alu -24 288 58 527 268 89 89 chr15 26442952 26443067 -74937454 - MIR SINE MIR -120 142 25 184 352 57 9 chr15 26443440 26443545 -74936976 - L2 LINE L2 -5 3308 3199 1832 122 7 0 chr15 26443825 26444096 -74936425 + AluSq SINE Alu 35 307 -6 256 250 31 0 chr15 26444250 26444314 -74936207 - MLT1K LTR MaLR -39 549 484 180 111 0 0 chr15 26445609 26445636 -74934885 + (TTCC)n Simple_repeat Simple_repeat 2 28 0 375 23 0 0 chr15 26445729 26445773 -74934748 + (TG)n Simple_repeat Simple_repeat 2 45 0 448 291 37 0 chr15 26445930 26446098 -74934423 - L2 LINE L2 -1056 2258 2082 243 256 58 0 chr15 26446104 26446190 -74934331 - L2 LINE L2 -1036 2278 2188 1002 275 90 14 chr15 26446203 26446570 -74933951 - MLT1I LTR MaLR -14 395 1 654 274 74 55 chr15 26447992 26448573 -74931948 + L1MC4 LINE L1 5268 5647 -517 242 318 93 0 chr15 26450180 26450287 -74930234 - L2 LINE L2 -11 3261 3145 3374 122 48 59 chr15 26450975 26451446 -74929075 - MER7C DNA MER2_type -2426 602 138 2289 55 21 0 chr15 26451446 26451735 -74928786 + AluY SINE Alu 3 297 -14 3374 122 48 59 chr15 26451735 26451872 -74928649 - MER7C DNA MER2_type -2890 138 1 1057 279 74 51 chr15 26452220 26452830 -74927691 - L2 LINE L2 -381 2933 2310 857 184 48 0 chr15 26452904 26453051 -74927470 + FRAM SINE Alu 9 162 -14 1964 237 69 57 chr15 26453590 26454190 -74926331 + L1MC4 LINE L1 6895 7523 -285 5977 46 0 11 chr15 26454190 26454911 -74925610 + L1PA7 LINE L1 5441 6153 -1 1964 237 69 57 chr15 26454911 26455200 -74925321 + L1MC4 LINE L1 7523 7807 -1 186 143 79 16 chr15 26455837 26455963 -74924558 + (TA)n Simple_repeat Simple_repeat 1 134 0 35 24 0 0 chr15 26455970 26456012 -74924509 + AT_rich Low_complexity Low_complexity 1 42 0 29 47 0 0 chr15 26456069 26456112 -74924409 + AT_rich Low_complexity Low_complexity 1 43 0 202 298 96 11 chr15 26456639 26456817 -74923704 - L2 LINE L2 -195 3077 2885 289 250 61 76 chr15 26456909 26456986 -74923535 - L2 LINE L2 -528 2786 2710 2125 110 17 0 chr15 26456986 26457285 -74923236 - AluSx SINE Alu -8 304 1 289 250 61 76 chr15 26457285 26457339 -74923182 - L2 LINE L2 -604 2710 2657 1232 269 89 49 chr15 26457538 26458495 -74922026 - L1ME3 LINE L1 0 6166 5116 1961 166 0 0 chr15 26458495 26458797 -74921724 - AluSx SINE Alu -9 303 2 1232 269 89 49 chr15 26458797 26459070 -74921451 - L1ME3 LINE L1 -1050 5116 4855 631 271 33 11 chr15 26460477 26460658 -74919863 + L1 LINE L1 2510 2694 -3452 303 277 76 0 chr15 26461018 26461137 -74919384 - L1ME4a LINE L1 -3 6118 5991 225 146 0 0 chr15 26461425 26461466 -74919055 - LTR66 LTR ERVL -171 439 399 365 285 106 31 chr15 26462814 26463070 -74917451 - L1ME4a LINE L1 -2082 5726 5452 407 302 38 19 chr15 26464896 26465055 -74915466 + MIR3 SINE MIR 32 193 -15 256 373 35 35 chr15 26465063 26465264 -74915257 + L3 LINE CR1 457 657 -920 627 227 129 12 chr15 26465273 26465436 -74915085 - MER58A DNA MER1_type -1 223 42 204 226 19 0 chr15 26466120 26466173 -74914348 - MIR SINE MIR -76 186 133 273 250 26 0 chr15 26466232 26466308 -74914213 - MER5A DNA MER1_type -83 106 29 658 143 34 0 chr15 26466973 26467092 -74913429 - L1MD1 LINE L1 -2 6240 6118 5103 144 36 4 chr15 26467696 26469266 -74911255 - L1MA4 LINE L1 -190 6110 4487 2596 196 15 65 chr15 26469258 26469935 -74910586 - L1ME4a LINE L1 -846 5300 4658 * 21 71 0 0 chr15 26470292 26470334 -74910187 + AT_rich Low_complexity Low_complexity 1 42 0 47 44 0 0 chr15 26470725 26470793 -74909728 + AT_rich Low_complexity Low_complexity 1 68 0 779 286 102 52 chr15 26471469 26472121 -74908400 - L1MC4 LINE L1 0 8042 7245 2388 84 0 7 chr15 26472121 26472420 -74908101 - AluSc SINE Alu -12 297 1 779 286 102 52 chr15 26472420 26472544 -74907977 - L1MC4 LINE L1 -797 7245 7129 189 310 16 93 chr15 26472664 26472793 -74907728 + MIR SINE MIR 14 132 -130 410 216 69 99 chr15 26474608 26474697 -74905824 - LTR37B LTR ERV1 -59 409 319 2294 59 3 53 chr15 26474697 26475000 -74905521 - AluY SINE Alu -23 288 1 410 216 69 99 chr15 26475000 26475142 -74905379 - LTR37B LTR ERV1 -149 319 185 1627 228 97 43 chr15 26475456 26475994 -74904527 + MLT1F1 LTR MaLR 1 567 0 263 146 0 0 chr15 26476697 26476745 -74903776 - L1MA3 LINE L1 0 6305 6258 219 250 250 9 chr15 26476752 26476864 -74903657 - MIR SINE MIR -14 248 110 211 245 6 37 chr15 26477474 26477637 -74902884 + (CA)n Simple_repeat Simple_repeat 1 158 0 1639 244 93 14 chr15 26477665 26478170 -74902351 - L1M4 LINE L1 -1139 5007 4463 430 243 5 60 chr15 26478847 26479032 -74901489 + (CAGA)n Simple_repeat Simple_repeat 4 178 0 462 136 0 0 chr15 26479041 26479122 -74901399 + (TGGA)n Simple_repeat Simple_repeat 4 84 0 313 290 21 14 chr15 26479260 26479405 -74901116 + (TAGA)n Simple_repeat Simple_repeat 2 147 0 236 248 165 15 chr15 26479965 26480098 -74900423 - L1MC/D LINE L1 -1988 5820 5668 280 265 59 82 chr15 26480252 26480471 -74900050 - L1MC/D LINE L1 -2263 5545 5332 2002 101 44 83 chr15 26480648 26481035 -74899486 - THE1C LTR MaLR 0 375 4 11081 101 13 32 chr15 26481038 26482648 -74897873 - THE1C-int LTR MaLR 0 1580 1 2199 117 24 35 chr15 26482650 26483025 -74897496 - THE1C LTR MaLR -2 373 3 608 309 105 39 chr15 26483066 26483429 -74897092 - MLT1J2 LTR MaLR -2 448 62 1026 217 90 32 chr15 26584141 26584418 -74796103 - MLT1E1 LTR MaLR -9 584 292 618 221 231 5 chr15 26584431 26584626 -74795895 - MER70A LTR ERVL -1 471 233 2155 181 98 65 chr15 26584726 26584974 -74795547 - L1MDa LINE L1 -4423 2117 1879 2196 136 3 3 chr15 26584974 26585276 -74795245 + AluSx SINE Alu 1 302 -10 2155 181 98 65 chr15 26585276 26585556 -74794965 - L1MDa LINE L1 -4661 1879 1564 2495 58 0 23 chr15 26585556 26585865 -74794656 - AluY SINE Alu -9 302 1 2155 181 98 65 chr15 26585865 26585948 -74794573 - L1MDa LINE L1 -4976 1564 1485 1994 183 68 8 chr15 26586694 26587092 -74793429 + MER95 LTR ERV 10 431 0 1537 254 81 22 chr15 26587532 26588077 -74792444 + L1ME3A LINE L1 5052 5563 -607 1144 210 75 42 chr15 26588077 26588410 -74792111 - MER2 DNA MER2_type 0 344 1 1537 254 81 22 chr15 26588410 26588510 -74792011 + L1ME3A LINE L1 5563 5656 -514 1359 205 27 102 chr15 26588510 26588914 -74791607 + MLT1A2 LTR MaLR 1 374 0 1537 254 81 22 chr15 26588914 26589097 -74791424 + L1ME3A LINE L1 5656 5924 -246 352 178 55 27 chr15 26589233 26589306 -74791215 - MER70B LTR ERVL -489 89 15 1448 167 42 14 chr15 26589506 26589793 -74790728 - MLT1E1 LTR MaLR -359 295 1 2180 141 0 0 chr15 26589993 26590297 -74790224 - AluSx SINE Alu -8 304 1 804 228 61 88 chr15 26593219 26593548 -74786973 + MLT2D LTR ERVL 47 366 -48 3386 109 56 8 chr15 26593625 26594158 -74786363 - Tigger3(Golem) DNA MER2_type 0 3029 2471 646 293 78 57 chr15 26594272 26594784 -74785737 - HAL1b LINE L1 -809 539 17 1780 152 4 4 chr15 26595986 26596262 -74784259 - AluJb SINE Alu -36 276 1 1801 199 11 16 chr15 26597528 26597895 -74782626 - MLT1A1 LTR MaLR 0 365 1 2360 265 50 4 chr15 26598045 26598781 -74781740 - L1M4 LINE L1 -3013 3133 2364 2635 175 49 35 chr15 26598893 26598945 -74781576 + L1MB7 LINE L1 5437 5487 -697 2532 60 0 3 chr15 26598945 26599243 -74781278 + AluY SINE Alu 1 297 -14 2635 175 49 35 chr15 26599243 26599766 -74780755 + L1MB7 LINE L1 5487 6020 -164 625 178 6 89 chr15 26599793 26599973 -74780548 - FRAM SINE Alu -11 165 1 522 220 78 0 chr15 26599975 26600116 -74780405 + L1MB8 LINE L1 6022 6173 -5 289 186 0 36 chr15 26600203 26600270 -74780251 - L1M3 LINE L1 -580 5603 5541 415 329 72 50 chr15 26600274 26600691 -74779830 + HAL1b LINE L1 351 776 -572 2262 114 0 0 chr15 26601005 26601302 -74779219 + AluSx SINE Alu 3 299 -13 279 276 9 9 chr15 26601359 26601464 -74779057 + L1M4 LINE L1 2148 2252 -3894 2311 91 0 0 chr15 26601880 26602176 -74778345 - AluY SINE Alu -15 296 1 317 232 0 14 chr15 26602328 26602397 -74778124 - MLT2C2 LTR ERVL -396 68 1 9553 160 50 56 chr15 26602397 26604057 -74776464 - ERVL-C2 LTR ERVL -8 5756 4108 2279 77 0 3 chr15 26604057 26604343 -74776178 - AluSg SINE Alu -25 285 1 9553 160 50 56 chr15 26604343 26604616 -74775905 - ERVL-C2 LTR ERVL -1656 4108 3835 207 0 0 0 chr15 26604622 26604645 -74775876 + (GA)n Simple_repeat Simple_repeat 1 23 0 336 227 0 0 chr15 26604650 26604738 -74775783 + G-rich Low_complexity Low_complexity 1 88 0 1612 197 49 12 chr15 26604738 26605083 -74775438 - MLT2D LTR ERVL -36 378 21 490 162 20 10 chr15 26605091 26605190 -74775331 - L1MEc LINE L1 -2352 3863 3764 * 1490 243 33 27 chr15 26605189 26605769 -74774752 - L1M4 LINE L1 -2985 3161 2110 1170 262 25 11 chr15 26605876 26606242 -74774279 - L1MEc LINE L1 -3353 2862 2492 286 235 25 12 chr15 26606271 26606352 -74774169 - L1MEc LINE L1 -4699 1697 1616 1355 302 66 30 chr15 26606440 26607421 -74773100 - L1MEd LINE L1 -2990 3139 2123 1410 279 114 36 chr15 26607767 26609062 -74771459 - L1MEd LINE L1 -4584 1726 299 323 196 59 23 chr15 26609746 26609918 -74770603 - MER5C DNA MER1_type 0 324 57 819 269 18 0 chr15 26610167 26610394 -74770127 - MIR SINE MIR -24 238 8 237 238 71 40 chr15 26610467 26610593 -74769928 + MER117 DNA MER1_type 18 147 -50 30827 93 15 7 chr15 26610954 26615586 -74764935 - L1P3 LINE L1 -557 5597 928 313 277 90 17 chr15 26615686 26615895 -74764626 - L1MC4 LINE L1 -135 7739 7462 317 182 0 15 chr15 26616823 26616889 -74763632 + MIR SINE MIR 87 151 -111 311 314 116 25 chr15 26616949 26617191 -74763330 - MLT1L LTR MaLR -38 577 314 1854 149 53 0 chr15 26618306 26618741 -74761780 - L1MA4A LINE L1 -23 6280 5762 519 190 39 73 chr15 26619156 26619335 -74761186 - HAL1 LINE L1 -662 1845 1673 2550 64 0 13 chr15 26619373 26619684 -74760837 + AluY SINE Alu 1 307 -4 949 186 54 50 chr15 26619763 26619865 -74760656 - L1ME LINE L1 -450 6108 6008 2084 121 55 28 chr15 26619865 26620229 -74760292 - THE1C LTR MaLR -1 374 1 949 186 54 50 chr15 26620229 26620347 -74760174 - L1ME LINE L1 -550 6008 5887 2578 213 53 13 chr15 26620347 26620364 -74760157 - L1ME LINE L1 -1801 4739 4724 1238 218 0 36 chr15 26620364 26620612 -74759909 - MER8 DNA MER2_type 0 239 1 2578 213 53 13 chr15 26620612 26621270 -74759251 - L1ME LINE L1 -1816 4724 4037 963 198 37 29 chr15 26621301 26621543 -74758978 - L1ME LINE L1 -4150 2390 2147 7760 105 4 3 chr15 26621643 26622703 -74757818 - L1P3 LINE L1 -5394 1067 7 186 148 93 0 chr15 26622970 26623024 -74757497 + L2 LINE L2 2475 2533 -781 2377 236 47 24 chr15 26623361 26623683 -74756838 + L1ME3 LINE L1 4882 5195 -969 1783 190 0 10 chr15 26623683 26623988 -74756533 + AluJb SINE Alu 1 302 -10 2377 236 47 24 chr15 26623988 26624710 -74755811 + L1ME3 LINE L1 5195 5942 -222 1789 211 81 86 chr15 26624715 26625317 -74755204 + MLT1E2 LTR MaLR 1 600 -25 334 213 75 94 chr15 26625331 26625491 -74755030 + L1ME3 LINE L1 5991 6147 -15 * 651 160 10 2 chr15 26625475 26625614 -74754907 + L1MA4 LINE L1 5791 5930 -244 232 304 63 58 chr15 26625707 26625914 -74754607 + L2 LINE L2 2870 3077 -236 1013 210 63 60 chr15 26627349 26627667 -74752854 + LTR55 LTR ERV 1 319 -229 256 196 0 0 chr15 26627667 26627713 -74752808 - MLT2C1 LTR ERVL 0 397 352 2348 139 106 24 chr15 26627725 26628011 -74752510 + Tigger3b DNA MER2_type 1 262 -2766 549 80 0 0 chr15 26628011 26628086 -74752435 + (TA)n Simple_repeat Simple_repeat 1 75 0 2455 79 7 0 chr15 26628086 26628390 -74752131 - AluY SINE Alu -5 306 1 2348 139 106 24 chr15 26628390 26628525 -74751996 + Tigger3b DNA MER2_type 261 458 -773 242 249 83 89 chr15 26628892 26628940 -74751581 - L1ME4a LINE L1 -21 6100 6053 1769 158 10 29 chr15 26628940 26629250 -74751271 + AluJb SINE Alu 5 308 -4 242 249 83 89 chr15 26629250 26629370 -74751151 - L1ME4a LINE L1 -68 6053 5933 343 287 79 43 chr15 26629430 26629594 -74750927 + MLT1J2 LTR MaLR 1 170 -276 363 207 157 41 chr15 26629734 26629911 -74750610 + MLT1J1 LTR MaLR 207 460 -51 890 259 32 41 chr15 26630211 26630555 -74749966 - L1ME4a LINE L1 -219 5951 5611 915 292 216 17 chr15 26630555 26630878 -74749643 - L2 LINE L2 -245 3068 2811 2350 82 3 16 chr15 26630878 26631182 -74749339 - AluSg SINE Alu -10 300 1 915 292 216 17 chr15 26631182 26631771 -74748750 - L2 LINE L2 -502 2811 1976 275 299 84 13 chr15 26631926 26632080 -74748441 - MIR3 SINE MIR -37 171 7 235 259 0 0 chr15 26632763 26632817 -74747704 + (TA)n Simple_repeat Simple_repeat 1 54 0 2300 128 31 31 chr15 26634763 26635121 -74745400 - THE1B LTR MaLR -6 358 1 2369 125 25 0 chr15 26635756 26636109 -74744412 + THE1B LTR MaLR 1 362 -2 8450 104 24 36 chr15 26636109 26637365 -74743156 + THE1B-int LTR MaLR 4 1244 -336 4853 147 17 40 chr15 26637486 26638362 -74742159 - MER4D LTR ERV1 -46 857 2 2288 79 46 74 chr15 26638425 26639145 -74741376 - MER4A LTR ERV1 0 779 1 905 293 53 20 chr15 26639300 26639655 -74740866 + MLT1I LTR MaLR 10 376 -33 425 239 101 14 chr15 26639795 26639933 -74740588 - MER74B LTR ERVL 0 622 473 1971 191 22 29 chr15 26640102 26640511 -74740010 - MER74A LTR ERVL -152 406 1 348 358 3 52 chr15 26640522 26640849 -74739672 - L1M4 LINE L1 -3726 2420 2110 2096 155 0 0 chr15 26641232 26641542 -74738979 - AluSx SINE Alu -2 310 1 9275 197 11 14 chr15 26641838 26643351 -74737170 - L1 LINE L1 -1862 4284 2768 2575 52 0 26 chr15 26643351 26643661 -74736860 + AluY SINE Alu 1 302 -9 225 0 0 0 chr15 26643661 26643686 -74736835 + (TA)n Simple_repeat Simple_repeat 2 26 0 9275 197 11 14 chr15 26643686 26644147 -74736374 - L1 LINE L1 -3376 2770 2315 2005 209 111 3 chr15 26644141 26645547 -74734974 - L1PBa LINE L1 -5159 1704 2 * 334 200 0 0 chr15 26645604 26645659 -74734862 + Tigger5 DNA MER2_type 1 55 -2268 387 203 0 0 chr15 26645661 26645730 -74734791 + Tigger5 DNA MER2_type 2255 2323 0 2327 92 14 0 chr15 26646019 26646313 -74734208 - AluSc SINE Alu -11 298 1 21 0 0 0 chr15 26646334 26646355 -74734166 + AT_rich Low_complexity Low_complexity 1 21 0 1743 140 4 0 chr15 26646360 26646617 -74733904 - Tigger3(Golem) DNA MER2_type -1 3028 2771 547 178 0 0 chr15 26646614 26646704 -74733817 - Tigger3(Golem) DNA MER2_type -2887 142 53 * 450 283 94 11 chr15 26647259 26647439 -74733082 - LTR33 LTR ERVL -322 199 5 2093 150 17 0 chr15 26648641 26648941 -74731580 + AluJb SINE Alu 1 305 -7 257 313 61 17 chr15 26650436 26650551 -74729970 - L2 LINE L2 -22 3291 3172 888 291 86 78 chr15 26650717 26651690 -74728831 - L2 LINE L2 -420 2894 1914 216 305 136 0 chr15 26652166 26652284 -74728237 + MIR SINE MIR 117 250 -12 2394 139 50 5 chr15 26652457 26652860 -74727661 - MSTB LTR MaLR -5 421 1 214 317 159 21 chr15 26654261 26654406 -74726115 - L2 LINE L2 -209 3063 2899 233 232 73 12 chr15 26656193 26656275 -74724246 + L2 LINE L2 2683 2769 -545 235 239 34 80 chr15 26656542 26656630 -74723891 + L2 LINE L2 3183 3266 -47 273 98 0 0 chr15 26656640 26656681 -74723840 + (TGGA)n Simple_repeat Simple_repeat 1 41 0 371 363 71 8 chr15 26660265 26660505 -74720016 - MIR SINE MIR 0 262 8 26 0 0 0 chr15 26660718 26660744 -74719777 + AT_rich Low_complexity Low_complexity 1 26 0 1136 123 0 27 chr15 26660769 26660988 -74719533 - L1MA4 LINE L1 -10 6290 6078 411 21 0 0 chr15 26661462 26661510 -74719011 + (TG)n Simple_repeat Simple_repeat 1 48 0 364 341 66 23 chr15 26662063 26662321 -74718200 - L3 LINE CR1 -199 1378 1110 300 249 55 73 chr15 26662323 26662488 -74718033 - L1ME4a LINE L1 0 6121 5960 2425 160 9 21 chr15 26662907 26663338 -74717183 - MSTB LTR MaLR 0 426 1 9176 152 38 15 chr15 26663339 26664916 -74715605 - MSTB-int LTR MaLR -1 1650 37 2523 113 23 57 chr15 26664934 26665375 -74715146 - MSTB LTR MaLR 0 426 1 233 246 33 8 chr15 26665428 26665550 -74714971 - L1ME4a LINE L1 -753 5393 5269 2591 69 3 0 chr15 26665734 26666038 -74714483 - AluY SINE Alu -6 305 1 23 33 0 0 chr15 26666040 26666070 -74714451 + AT_rich Low_complexity Low_complexity 1 30 0 367 317 51 31 chr15 26666382 26666744 -74713777 - L1ME4a LINE L1 -1536 4610 4100 522 306 19 40 chr15 26666866 26667242 -74713279 - L1ME4a LINE L1 -3624 2522 2155 319 373 63 0 chr15 26667577 26667735 -74712786 - HAL1 LINE L1 -814 1693 1526 839 199 86 0 chr15 26669069 26669255 -74711266 + MER58A DNA MER1_type 19 220 -4 1467 258 37 52 chr15 26669255 26669817 -74710704 - MER74B LTR ERVL 0 622 69 356 173 95 19 chr15 26669823 26669929 -74710592 + FLAM SINE Alu 66 131 -2 234 116 0 0 chr15 26670137 26670180 -74710341 + (TG)n Simple_repeat Simple_repeat 1 43 0 201 259 0 28 chr15 26672089 26672197 -74708324 + (TG)n Simple_repeat Simple_repeat 1 105 0 449 251 34 23 chr15 26672209 26672384 -74708137 + (TATG)n Simple_repeat Simple_repeat 4 180 0 188 178 0 22 chr15 26672442 26672487 -74708034 + (TG)n Simple_repeat Simple_repeat 1 44 0 301 270 35 26 chr15 26672488 26672603 -74707918 + (TATATG)n Simple_repeat Simple_repeat 4 119 0 232 171 45 11 chr15 26672606 26672694 -74707827 + (TG)n Simple_repeat Simple_repeat 2 92 0 338 200 75 13 chr15 26673353 26673433 -74707088 + MIR SINE MIR 67 152 -56 298 307 44 15 chr15 26674193 26674330 -74706191 - LTR33 LTR ERVL 0 521 381 1964 178 138 10 chr15 26674628 26675033 -74705488 + LTR32 LTR ERVL 15 471 0 2144 128 20 0 chr15 26675478 26675775 -74704746 + AluSx SINE Alu 1 303 -9 2295 58 3 88 chr15 26675777 26676107 -74704414 + AluY SINE Alu 1 302 -9 213 94 0 0 chr15 26676298 26676330 -74704191 + (TAA)n Simple_repeat Simple_repeat 1 32 0 1824 270 55 24 chr15 26676586 26677308 -74703213 + L1MC3 LINE L1 5856 6600 -1185 1601 181 45 3 chr15 26677367 26677681 -74702840 + MSTB LTR MaLR 98 424 -2 741 205 19 0 chr15 26677684 26677840 -74702681 + L1MC3 LINE L1 6616 6774 -1011 384 288 107 0 chr15 26678939 26679116 -74701405 - L1MC/D LINE L1 -2010 5798 5603 614 264 48 32 chr15 26679572 26679901 -74700620 + L1M4b LINE L1 -254 119 -6165 1500 137 46 76 chr15 26679958 26680287 -74700234 + MER2 DNA MER2_type 25 343 -2 1535 189 80 141 chr15 26680290 26681521 -74699000 + L1M4b LINE L1 377 1478 -4906 195 42 0 0 chr15 26681521 26681545 -74698976 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 1535 189 80 141 chr15 26681545 26681656 -74698865 + L1M4b LINE L1 1478 1594 -4790 2406 98 0 0 chr15 26681658 26681954 -74698567 + AluSx SINE Alu 1 296 -16 260 210 0 0 chr15 26683602 26683664 -74696857 + A-rich Low_complexity Low_complexity 1 62 0 830 155 8 0 chr15 26683701 26683830 -74696691 + FLAM_C SINE Alu 1 130 -13 354 246 38 121 chr15 26683838 26684184 -74696337 + L1M4b LINE L1 1645 2112 -4451 380 356 20 57 chr15 26684214 26684461 -74696060 + L1MEc LINE L1 1734 1971 -4425 186 161 0 0 chr15 26685399 26685430 -74695091 - L2 LINE L2 -18 3254 3224 185 246 92 0 chr15 26685432 26685497 -74695024 - MIR SINE MIR -92 170 100 1828 206 96 0 chr15 26685497 26685934 -74694587 - MLT2B1 LTR ERVL 0 520 42 3576 148 39 0 chr15 26686780 26687427 -74693094 - L1PB4 LINE L1 -1 6155 5484 5544 197 12 11 chr15 26687427 26688629 -74691892 - L1PB4 LINE L1 -1024 5122 3919 1163 139 0 0 chr15 26688625 26688819 -74691702 + L1PB4 LINE L1 3725 3918 -2228 * 303 278 167 17 chr15 26691277 26691457 -74689064 + L2 LINE L2 3014 3220 -93 182 71 0 71 chr15 26694927 26694969 -74685552 + (GGAGAA)n Simple_repeat Simple_repeat 5 43 0 281 129 0 32 chr15 26695472 26695534 -74684987 + (CCG)n Simple_repeat Simple_repeat 3 62 0 42 71 0 0 chr15 26695616 26695700 -74684821 + GC_rich Low_complexity Low_complexity 1 84 0 21 0 0 0 chr15 26695876 26695897 -74684624 + GC_rich Low_complexity Low_complexity 1 21 0 28 71 0 0 chr15 26695925 26695981 -74684540 + GC_rich Low_complexity Low_complexity 1 56 0 2396 101 0 3 chr15 26696397 26696704 -74683817 + AluSx SINE Alu 1 306 -6 379 325 55 39 chr15 26696704 26696948 -74683573 + L1MEc LINE L1 2728 2978 -3237 380 214 43 43 chr15 26697647 26697764 -74682757 + MLT1G1 LTR MaLR 477 593 -2 225 246 53 79 chr15 26697853 26697967 -74682554 + MIR SINE MIR 134 244 -18 1614 137 63 3 chr15 26698112 26698397 -74682124 + AluJo SINE Alu 1 302 -10 1897 68 129 4 chr15 26698398 26698662 -74681859 + AluSg1 SINE Alu 1 297 -12 1416 104 62 78 chr15 26699606 26699655 -74680866 + L1MA8 LINE L1 5988 6036 -255 2526 62 7 0 chr15 26699655 26699959 -74680562 + AluSp SINE Alu 1 306 -7 1416 104 62 78 chr15 26699959 26700218 -74680303 + L1MA8 LINE L1 6036 6291 0 1174 182 146 3 chr15 26700826 26701158 -74679363 - MER47B DNA MER2_type -1 417 1 181 158 70 70 chr15 26701383 26701440 -74679081 + MIR SINE MIR 19 75 -133 295 286 107 58 chr15 26701539 26701745 -74678776 + MLT1K LTR MaLR 329 544 -44 201 113 16 32 chr15 26702202 26702264 -74678257 + (CGCGG)n Simple_repeat Simple_repeat 4 64 0 25 0 0 0 chr15 26704447 26704472 -74676049 + AT_rich Low_complexity Low_complexity 1 25 0 1518 226 54 41 chr15 26707401 26707865 -74672656 + L2 LINE L2 2843 3312 -1 2134 89 25 70 chr15 26710314 26710641 -74669880 - AluSx SINE Alu 0 312 1 2185 122 44 33 chr15 26710718 26711078 -74669443 - THE1B LTR MaLR 0 364 1 247 344 258 7 chr15 26711429 26711580 -74668941 - MIR SINE MIR -73 189 1 238 241 19 0 chr15 26711960 26712014 -74668507 + MIR SINE MIR 87 141 -67 553 278 137 26 chr15 26712073 26712386 -74668135 - LTR50 LTR ERVL -26 769 422 2552 282 84 54 chr15 26712596 26714123 -74666398 - ERVL LTR ERVL -321 5443 3871 965 159 17 82 chr15 26714126 26714234 -74666287 - MER20 DNA MER1_type 0 219 132 2818 175 35 14 chr15 26714234 26714743 -74665778 + MLT2B1 LTR ERVL 1 520 0 965 159 17 82 chr15 26714743 26714867 -74665654 - MER20 DNA MER1_type -87 132 2 1042 339 91 5 chr15 26714883 26715521 -74665000 - ERVL LTR ERVL -1904 3860 3168 4595 126 54 26 chr15 26715778 26716826 -74663695 + MER52C LTR ERV1 1 1278 0 1367 302 62 53 chr15 26716833 26717106 -74663415 - ERVL LTR ERVL -2944 2820 2551 2319 111 0 0 chr15 26717106 26717404 -74663117 + AluSx SINE Alu 1 298 -14 1367 302 62 53 chr15 26717404 26717992 -74662529 - ERVL LTR ERVL -3213 2551 1952 1607 249 89 31 chr15 26718290 26718765 -74661756 - L1ME2 LINE L1 -9 6155 5638 1533 118 107 48 chr15 26718765 26718910 -74661611 + AluSx SINE Alu 1 136 -176 2282 89 3 3 chr15 26718910 26719202 -74661319 + AluSg1 SINE Alu 1 292 -17 1533 118 107 48 chr15 26719202 26719345 -74661176 + AluSx SINE Alu 136 306 -6 1607 249 89 31 chr15 26719345 26719456 -74661065 - L1ME2 LINE L1 -526 5638 5535 200 310 70 10 chr15 26720153 26720253 -74660268 - L2 LINE L2 -3 3269 3164 222 284 91 11 chr15 26720438 26720526 -74659995 - MIR SINE MIR -140 122 28 2574 158 68 24 chr15 26721676 26722190 -74658331 - MER21A LTR ERV1 0 931 272 2686 55 0 0 chr15 26722190 26722499 -74658022 - AluY SINE Alu -2 309 1 2574 158 68 24 chr15 26722499 26722784 -74657737 - MER21A LTR ERV1 -659 272 1 23 0 0 0 chr15 26722925 26722948 -74657573 + AT_rich Low_complexity Low_complexity 1 23 0 1508 153 122 68 chr15 26723298 26723709 -74656812 - LTR12 LTR ERV1 -229 485 53 252 231 0 0 chr15 26723709 26723761 -74656760 - LTR30 LTR ERV1 -670 52 1 1361 272 91 13 chr15 26723842 26724185 -74656336 - LTR19-int LTR ERV1 -3744 3152 2762 2403 65 0 43 chr15 26724185 26724509 -74656012 - AluY SINE Alu 0 311 2 1361 272 91 13 chr15 26724509 26724629 -74655892 - LTR19-int LTR ERV1 -4134 2762 2653 584 148 142 6 chr15 26724819 26724988 -74655533 - LTR19-int LTR ERV1 -2321 3265 3074 2329 88 0 7 chr15 26725151 26725446 -74655075 - AluSc SINE Alu -16 293 1 280 273 118 0 chr15 26725514 26725624 -74654897 + MER94 DNA DNA 12 134 0 3999 148 19 3 chr15 26726358 26727026 -74653495 + MER54B LTR ERVL 4 682 -111 797 232 0 4 chr15 26727571 26727853 -74652668 + (TGGA)n Simple_repeat Simple_repeat 1 280 0 588 212 11 6 chr15 26727878 26728057 -74652464 + (TGGA)n Simple_repeat Simple_repeat 1 180 0 249 286 18 0 chr15 26728124 26728180 -74652341 + L2 LINE L2 3246 3302 -11 354 230 147 9 chr15 26728998 26729175 -74651346 + L1MC4a LINE L1 6441 6604 -1204 1478 238 86 52 chr15 26729229 26729287 -74651234 + L1MC4 LINE L1 6870 6925 -1117 2072 149 10 0 chr15 26729287 26729596 -74650925 + AluJo SINE Alu 1 312 0 1478 238 86 52 chr15 26729596 26730383 -74650138 + L1MC4 LINE L1 6925 7902 -140 1464 105 0 11 chr15 26730467 26730657 -74649864 + AluSq SINE Alu 1 188 -125 4063 115 3 2 chr15 26730658 26731248 -74649273 + LTR10C LTR ERV1 1 591 0 513 332 103 19 chr15 26731250 26731512 -74649009 + LTR10C-int LTR ERV1 6 289 -6360 321 213 82 57 chr15 26731792 26731942 -74648579 + L1MC4 LINE L1 6500 6702 -1139 208 175 25 0 chr15 26731943 26731983 -74648538 + (CATATA)n Simple_repeat Simple_repeat 2 42 0 323 253 0 74 chr15 26731992 26732087 -74648434 + L1MC4 LINE L1 6615 6702 -1340 313 286 0 33 chr15 26732108 26732199 -74648322 + L1MC4 LINE L1 6615 6702 -1340 310 300 22 11 chr15 26732231 26732321 -74648200 + L1MC4 LINE L1 6614 6704 -1338 323 231 14 53 chr15 26732334 26732475 -74648046 + L1MC4 LINE L1 6558 6646 -1139 308 235 0 98 chr15 26732423 26732525 -74647996 - L1MC4 LINE L1 -1339 6703 6612 * 313 242 33 55 chr15 26732490 26732581 -74647940 + L1MC4 LINE L1 6614 6702 -1340 303 258 11 54 chr15 26732588 26732681 -74647840 + L1MC4 LINE L1 6614 6702 -1340 294 148 0 37 chr15 26732682 26732763 -74647758 + (CATATA)n Simple_repeat Simple_repeat 2 79 0 341 223 32 64 chr15 26732763 26732857 -74647664 + L1MC4 LINE L1 6614 6704 -1338 417 298 0 0 chr15 26733319 26733460 -74647061 + A-rich Low_complexity Low_complexity 1 141 0 2015 131 64 43 chr15 26733470 26733751 -74646770 + Harlequin LTR ERV1 1896 2170 -4726 2285 96 3 3 chr15 26733751 26734043 -74646478 + AluY SINE Alu 1 292 -19 2015 131 64 43 chr15 26734043 26734324 -74646197 + Harlequin LTR ERV1 2170 2470 -4426 438 306 19 0 chr15 26734551 26734708 -74645813 + L1MCc LINE L1 264 423 -6000 246 288 14 0 chr15 26734812 26734885 -74645636 - L1MCc LINE L1 -5507 916 843 2366 258 59 49 chr15 26734902 26736231 -74644290 + L1MCc LINE L1 1192 2507 -4615 2266 111 3 16 chr15 26736231 26736538 -74643983 + AluSx SINE Alu 1 303 -9 2366 258 59 49 chr15 26736538 26736866 -74643655 + L1MCc LINE L1 2507 2830 -4292 1577 129 37 0 chr15 26736866 26737083 -74643438 + AluSx SINE Alu 1 225 -87 2366 258 59 49 chr15 26737083 26737183 -74643338 + L1MCc LINE L1 2830 3177 -3945 2136 132 3 3 chr15 26737960 26738255 -74642266 - AluSx SINE Alu -17 295 1 226 232 214 36 chr15 26738535 26738647 -74641874 + MIR SINE MIR 119 250 -12 837 256 156 14 chr15 26738800 26739160 -74641361 + MER20B DNA MER1_type 350 760 -23 218 111 56 0 chr15 26741707 26741743 -74638778 - MER91B DNA MER1_type -129 61 24 730 245 21 21 chr15 26741850 26742038 -74638483 - MER58A DNA MER1_type 0 224 37 289 364 26 7 chr15 26743767 26743921 -74636600 + MIR SINE MIR 92 248 -14 482 113 0 113 chr15 26745573 26745679 -74634842 - AluSg/x SINE Alu -1 308 215 3610 130 37 0 chr15 26745679 26746249 -74634272 - LTR10C LTR ERV1 0 591 1 2421 310 60 23 chr15 26746294 26746454 -74634067 - HERVI LTR ERV1 -79 7706 7553 2455 52 38 0 chr15 26746454 26746743 -74633778 - AluY SINE Alu -11 300 1 2421 310 60 23 chr15 26746743 26747771 -74632750 - HERVI LTR ERV1 -232 7553 6474 4356 146 21 8 chr15 26747874 26748532 -74631989 + L1P LINE L1 3917 4588 -1558 2780 93 3 11 chr15 26748532 26748899 -74631622 + THE1B LTR MaLR 1 364 0 4356 146 21 8 chr15 26748899 26749016 -74631505 + L1P LINE L1 4588 4702 -1444 1096 100 0 17 chr15 26749959 26750139 -74630382 + (TTCC)n Simple_repeat Simple_repeat 1 177 0 360 346 23 8 chr15 26750140 26750270 -74630251 + CT-rich Low_complexity Low_complexity 5 136 0 11656 24 1 1 chr15 26750370 26751721 -74628800 + L1P LINE L1 3537 4888 -1258 6595 103 1 15 chr15 26751821 26752824 -74627697 + L1P LINE L1 2529 3517 -2629 2168 106 0 3 chr15 26754512 26754817 -74625704 - AluSx SINE Alu 0 304 1 1562 197 37 34 chr15 26754817 26755167 -74625354 - MSTD LTR MaLR -43 353 3 1316 234 55 2 chr15 26755340 26755738 -74624783 - L1M4 LINE L1 -2098 5467 5049 522 157 11 0 chr15 26755838 26755927 -74624594 - L1PBa LINE L1 -6773 90 1 * 2579 258 74 14 chr15 26755921 26756858 -74623663 - L1M4 LINE L1 -4311 3254 2262 414 344 176 30 chr15 26756994 26758094 -74622427 - L2 LINE L2 -19 3253 1978 1159 113 0 6 chr15 26758320 26758488 -74622033 - AluSg/x SINE Alu -8 304 138 233 160 0 20 chr15 26758540 26758590 -74621931 + A-rich Low_complexity Low_complexity 2 50 0 1752 156 96 28 chr15 26758832 26759185 -74621336 - MLT1B LTR MaLR -11 379 3 1488 189 84 112 chr15 26759189 26759614 -74620907 + LTR8 LTR ERV1 4 375 -316 535 159 9 28 chr15 26760252 26760359 -74620162 - MER53 DNA DNA -82 107 3 3135 80 0 3 chr15 26761232 26761608 -74618913 - THE1C LTR MaLR 0 375 1 5835 103 4 9 chr15 26761608 26762416 -74618105 - THE1C-int LTR MaLR 0 1580 777 712 268 59 75 chr15 26762998 26763442 -74617079 + MLT1J LTR MaLR 24 511 0 5623 61 12 10 chr15 26763707 26764427 -74616094 - Harlequin LTR ERV1 -5912 984 263 2072 107 20 57 chr15 26764407 26764761 -74615760 - Harlequin LTR ERV1 -6497 399 59 * 2468 50 0 7 chr15 26764933 26765232 -74615289 + AluY SINE Alu 2 298 -13 1282 147 14 9 chr15 26765252 26765463 -74615058 + AluJb SINE Alu 85 296 -16 2082 112 0 10 chr15 26765765 26766069 -74614452 - AluSx SINE Alu -11 301 1 1432 209 0 0 chr15 26766402 26766660 -74613861 - L1PB4 LINE L1 -12 6144 5887 1115 203 16 32 chr15 26767361 26767442 -74613079 + L1 LINE L1 4476 4557 -1589 2341 77 27 0 chr15 26767442 26767740 -74612781 + AluSp SINE Alu 1 306 -7 1115 203 16 32 chr15 26767740 26767909 -74612612 + L1 LINE L1 4557 4722 -1424 13923 53 3 14 chr15 26768020 26769724 -74610797 - Harlequin LTR ERV1 -2517 4379 2693 2682 77 0 0 chr15 26771276 26771613 -74608908 - L1MA2 LINE L1 -370 5934 5598 2089 92 7 50 chr15 26771616 26771949 -74608572 - AluSx SINE Alu 0 312 1 381 229 31 0 chr15 26772111 26772207 -74608314 - MER103 DNA DNA -9 157 59 699 207 94 48 chr15 26772308 26772672 -74607849 + MLT1C LTR MaLR 5 458 -9 1892 77 28 4 chr15 26773058 26773306 -74607215 + L1PA13 LINE L1 5908 6161 -2 1109 146 131 16 chr15 26773376 26773647 -74606874 + MSTA LTR MaLR 91 428 0 198 244 44 0 chr15 26774085 26774130 -74606391 + MIR SINE MIR 72 118 -90 183 239 22 0 chr15 26774569 26774615 -74605906 + L2 LINE L2 3262 3308 -5 213 39 0 0 chr15 26774809 26774835 -74605686 + (TAA)n Simple_repeat Simple_repeat 2 27 0 3803 107 23 12 chr15 26776831 26777020 -74603501 + LTR43 LTR ERV1 25 211 -391 1864 128 7 7 chr15 26777020 26777302 -74603219 + AluSx SINE Alu 16 297 -15 3803 107 23 12 chr15 26777302 26777683 -74602838 + LTR43 LTR ERV1 211 601 -1 459 246 159 34 chr15 26777953 26778217 -74602304 - L1MCa LINE L1 -2572 3854 3558 2328 250 62 22 chr15 26778226 26778430 -74602091 - L1MCa LINE L1 -3599 2827 2632 396 0 0 0 chr15 26778430 26778474 -74602047 + (TG)n Simple_repeat Simple_repeat 2 45 0 2328 250 62 22 chr15 26778474 26779396 -74601125 - L1MCa LINE L1 -3794 2632 1516 840 251 70 18 chr15 26779497 26779827 -74600694 + L1M4 LINE L1 4446 4792 -1354 305 225 25 38 chr15 26779839 26779919 -74600602 - MER5B DNA MER1_type -98 80 2 572 295 116 68 chr15 26780795 26781432 -74599089 - L3 LINE CR1 -259 1318 651 297 297 87 14 chr15 26781649 26781787 -74598734 + MIR SINE MIR 6 153 -109 390 257 176 93 chr15 26781796 26782204 -74598317 - LTR67 LTR ERVL -2 555 114 3710 232 66 28 chr15 26782894 26783773 -74596748 + L1MEc LINE L1 1856 2774 -3441 2627 158 11 34 chr15 26783773 26784215 -74596306 + MSTB1 LTR MaLR 1 432 0 3710 232 66 28 chr15 26784215 26784758 -74595763 + L1MEc LINE L1 2774 3295 -2920 947 101 25 0 chr15 26785408 26785527 -74594994 + FLAM_C SINE Alu 1 122 -11 739 157 45 8 chr15 26785552 26785686 -74594835 - MSTA LTR MaLR -57 371 233 2686 223 29 51 chr15 26785697 26786696 -74593825 + L1M3c LINE L1 800 1794 -4519 1222 209 41 34 chr15 26787713 26788005 -74592516 - MLT1A2 LTR MaLR -78 296 3 299 306 19 37 chr15 26788143 26788414 -74592107 + L1M3c LINE L1 2473 2738 -3644 213 39 0 0 chr15 26788814 26788840 -74591681 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1914 106 26 4 chr15 26788840 26789105 -74591416 + AluSx SINE Alu 1 271 -41 538 225 125 21 chr15 26789653 26789822 -74590699 + MLT1J1 LTR MaLR 21 204 -246 2231 106 27 0 chr15 26789823 26790124 -74590397 - AluSx SINE Alu -3 309 1 353 262 143 60 chr15 26790395 26790731 -74589790 - L2 LINE L2 -543 2771 2408 2439 84 0 0 chr15 26790800 26791096 -74589425 - AluSq SINE Alu -17 296 1 381 216 55 80 chr15 26791098 26791209 -74589312 - L1M4 LINE L1 -4790 1856 1744 203 32 65 0 chr15 26791209 26791240 -74589281 + T-rich Low_complexity Low_complexity 3 35 0 381 216 55 80 chr15 26791240 26791438 -74589083 - L1M4 LINE L1 -4902 1744 1568 495 80 13 13 chr15 26794264 26794339 -74586182 + L1PA13 LINE L1 6082 6156 -7 259 376 50 0 chr15 26795067 26795168 -74585353 + MIR SINE MIR 20 125 -137 645 169 14 21 chr15 26795414 26795556 -74584965 + L1MA4A LINE L1 5983 6123 -180 403 223 0 21 chr15 26795559 26795653 -74584868 + L1MA4A LINE L1 6189 6280 -23 608 218 127 30 chr15 26797371 26797536 -74582985 + MER5A DNA MER1_type 9 189 0 227 230 6 0 chr15 26797769 26797816 -74582705 - MER5B DNA MER1_type -66 123 64 2233 169 0 24 chr15 26797816 26798188 -74582333 + MLT1A1 LTR MaLR 1 363 -2 184 75 25 25 chr15 26800182 26800222 -74580299 + (CAAAA)n Simple_repeat Simple_repeat 1 40 0 295 303 0 20 chr15 26800880 26800979 -74579542 - MIR3 SINE MIR -11 19