4015 190 42 32 chr10 1524 2418 -145586870 + L1MB4 LINE L1 5277 6179 -1 516 80 67 0 chr10 2434 2509 -145586779 + L1MB8 LINE L1 6099 6178 0 756 234 81 5 chr10 2950 3159 -145586129 - L1MB3 LINE L1 0 6183 5959 2683 172 25 25 chr10 3586 4075 -145585213 - L1MCa LINE L1 -5912 514 26 660 179 49 24 chr10 4214 4337 -145584951 - FLAM_A SINE Alu -7 126 1 609 98 6 58 chr10 5450 5624 -145583664 + (CCCTAA)n Simple_repeat Simple_repeat 4 168 0 1523 195 0 27 chr10 5896 6188 -145583100 + AluSx SINE Alu 6 289 -23 2299 94 0 7 chr10 6476 6773 -145582515 + AluSq SINE Alu 1 295 -18 2233 102 7 0 chr10 7137 7432 -145581856 - AluSx SINE Alu -15 297 1 283 81 0 0 chr10 9162 9199 -145580089 + Alu SINE Alu 1 37 -263 2245 109 0 7 chr10 10260 10562 -145578726 - AluSx SINE Alu -12 300 1 422 188 12 0 chr10 10633 10713 -145578575 + AluJ/FRAM SINE Alu 231 311 -1 2379 100 0 0 chr10 10736 11047 -145578241 - AluSx SINE Alu -1 311 1 849 171 38 13 chr10 11047 11205 -145578083 - AluJb SINE Alu -8 304 143 1904 131 13 36 chr10 13392 13698 -145575590 - AluSx SINE Alu -13 299 1 185 108 27 0 chr10 14218 14255 -145575033 + (TAAG)n Simple_repeat Simple_repeat 2 39 0 1743 179 0 7 chr10 14732 15029 -145574259 + AluSx SINE Alu 1 295 -17 23 0 0 0 chr10 15029 15052 -145574236 + AT_rich Low_complexity Low_complexity 1 23 0 415 287 87 41 chr10 15508 15703 -145573585 + MIR SINE MIR 11 214 -48 1953 155 147 5 chr10 15910 16285 -145573003 + MSTA LTR MaLR 1 428 0 351 132 15 44 chr10 16476 16544 -145572744 + MER116 DNA Mariner 3 68 -12 29 0 0 0 chr10 16597 16626 -145572662 + AT_rich Low_complexity Low_complexity 1 29 0 1186 129 0 43 chr10 16629 16815 -145572473 + AluSx SINE Alu 1 178 -134 1523 136 143 8 chr10 17110 17375 -145571913 - AluSx SINE Alu -11 301 1 184 313 0 15 chr10 17877 17944 -145571344 - MIR SINE MIR 0 262 197 2063 130 20 0 chr10 17974 18274 -145571014 - AluSx SINE Alu -6 306 1 201 74 0 0 chr10 18369 18396 -145570892 + (CA)n Simple_repeat Simple_repeat 2 28 0 199 341 154 11 chr10 19543 19634 -145569654 - L2 LINE L2 -19 3253 3150 505 135 27 0 chr10 19672 19746 -145569542 + FRAM SINE Alu 49 124 -52 1315 217 71 0 chr10 20375 20656 -145568632 - AluJb SINE Alu 0 302 2 33 43 0 0 chr10 20992 21039 -145568249 + AT_rich Low_complexity Low_complexity 1 47 0 2409 61 0 0 chr10 21244 21540 -145567748 - AluY SINE Alu -15 296 1 187 194 81 48 chr10 21811 21873 -145567415 - L2 LINE L2 -618 2696 2633 28 29 0 0 chr10 24537 24572 -145564716 + AT_rich Low_complexity Low_complexity 1 35 0 204 198 209 55 chr10 25010 25101 -145564187 + L2 LINE L2 1860 1964 -1350 24802 39 8 0 chr10 25210 28845 -145560443 - L1PA4 LINE L1 -11 6144 2486 930 186 6 6 chr10 28959 29120 -145560168 - AluJb SINE Alu -15 297 137 1085 318 54 23 chr10 29129 29614 -145559674 + L2 LINE L2 2069 2568 -746 1932 206 29 55 chr10 30088 30598 -145558690 - L1M4 LINE L1 -924 5222 4726 672 289 213 49 chr10 30731 31402 -145557886 - L2 LINE L2 -816 2498 1718 240 258 52 0 chr10 31482 31579 -145557709 - HAL1 LINE L1 -75 2432 2331 1025 277 41 32 chr10 31724 32063 -145557225 + MLT1I LTR MaLR 62 403 -6 246 333 92 13 chr10 32097 32332 -145556956 - L2 LINE L2 -285 2987 2732 893 210 99 67 chr10 32620 32992 -145556296 + HAL1 LINE L1 804 1187 -1320 800 255 200 43 chr10 33029 33593 -145555695 + HAL1 LINE L1 1284 1936 -571 2245 248 133 77 chr10 33636 33904 -145555384 + L1MC4a LINE L1 3696 3947 -2231 13169 160 42 23 chr10 33904 36277 -145553011 + Tigger1 DNA MER2_type 1 2418 0 2245 248 133 77 chr10 36277 37687 -145551601 + L1MC4a LINE L1 3947 5484 -694 1924 131 13 19 chr10 37687 38001 -145551287 + AluJb SINE Alu 1 312 0 2245 248 133 77 chr10 38001 38306 -145550982 + L1MC4a LINE L1 5484 5770 -408 4335 85 15 102 chr10 38500 39227 -145550061 + MER4A LTR ERV1 1 664 0 1097 153 0 0 chr10 40098 40268 -145549020 - FRAM SINE Alu -6 170 1 2267 91 0 0 chr10 40981 41279 -145548009 + AluSc SINE Alu 1 298 -11 373 246 65 36 chr10 41921 42059 -145547229 - MIR3 SINE MIR -6 202 61 194 0 39 0 chr10 42088 42114 -145547174 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 791 245 50 10 chr10 42468 42668 -145546620 - MIR SINE MIR -37 225 18 239 297 228 0 chr10 42675 42776 -145546512 - MIR SINE MIR -134 128 5 1862 141 14 0 chr10 42788 43079 -145546209 + AluJb SINE Alu 1 295 -17 1560 177 0 11 chr10 43502 43779 -145545509 - AluJo SINE Alu -38 274 1 389 164 0 0 chr10 44143 44216 -145545072 + LTR30 LTR ERV1 552 624 -98 36 40 0 0 chr10 44220 44270 -145545018 + AT_rich Low_complexity Low_complexity 1 50 0 1354 176 33 0 chr10 46002 46247 -145543041 - Tigger7 DNA MER2_type -22 2469 2217 31 44 0 0 chr10 46866 46911 -145542377 + GC_rich Low_complexity Low_complexity 1 45 0 407 133 67 0 chr10 47165 47240 -145542048 + AluJ/FRAM SINE Alu 219 298 -14 1363 239 12 60 chr10 47242 47664 -145541624 - L1M4 LINE L1 -1293 4853 4455 1984 149 0 3 chr10 47664 47973 -145541315 - AluY SINE Alu -3 308 1 1363 239 12 60 chr10 47973 48032 -145541256 - L1M4 LINE L1 -1691 4455 4395 863 212 25 5 chr10 48034 48232 -145541056 - AluJo SINE Alu -24 288 87 296 56 0 0 chr10 48253 48289 -145540999 - MER31-int LTR ERV1 -3839 1097 1062 697 132 0 0 chr10 48289 48395 -145540893 + MLT2B3 LTR ERVL 1 106 -448 226 241 60 36 chr10 48850 48933 -145540355 - L1MC4 LINE L1 -2 8040 7956 347 347 35 0 chr10 49191 49335 -145539953 - L1MC4 LINE L1 -524 7518 7370 189 339 27 18 chr10 49340 49452 -145539836 + L2 LINE L2 2687 2799 -515 1220 165 148 8 chr10 49891 50134 -145539154 + AluJb SINE Alu 1 277 -35 298 203 130 0 chr10 50145 50214 -145539074 + LTR35 LTR ERV1 453 530 -88 443 169 26 0 chr10 50275 50352 -145538936 + LTR35 LTR ERV1 540 618 0 21 0 0 0 chr10 50398 50419 -145538869 + AT_rich Low_complexity Low_complexity 1 21 0 1552 45 0 0 chr10 50529 50705 -145538583 - L1PA3 LINE L1 -2 6153 5978 1874 133 10 20 chr10 50814 51116 -145538172 + AluSx SINE Alu 13 311 -1 2045 144 0 10 chr10 51274 51587 -145537701 + AluSx SINE Alu 1 310 -2 1873 107 50 7 chr10 51595 51875 -145537413 + AluSq SINE Alu 1 292 -21 1529 169 61 0 chr10 51889 52168 -145537120 + AluJo SINE Alu 1 296 -16 1842 146 3 34 chr10 52188 52511 -145536777 + AluSq SINE Alu 1 313 0 2038 101 3 14 chr10 52517 52814 -145536474 + AluSx SINE Alu 1 294 -18 1931 125 3 13 chr10 52816 53128 -145536160 + AluSg1 SINE Alu 1 309 0 432 127 0 13 chr10 53449 53528 -145535760 - AluJ/FRAM SINE Alu -3 309 232 2247 75 3 10 chr10 53604 53911 -145535377 + AluSp SINE Alu 1 305 -8 2190 90 0 0 chr10 54624 54914 -145534374 + AluSq SINE Alu 15 304 -9 394 82 0 0 chr10 55568 55617 -145533671 + Alu SINE Alu 15 63 -239 800 192 0 0 chr10 57085 57241 -145532047 + AluSg/x SINE Alu 146 301 -11 1680 177 0 10 chr10 57430 57741 -145531547 - AluJb SINE Alu -4 308 1 198 0 0 0 chr10 57860 57882 -145531406 + (T)n Simple_repeat Simple_repeat 1 22 0 188 200 67 0 chr10 57891 57936 -145531352 + MER5B DNA MER1_type 84 131 -47 6384 154 24 75 chr10 57959 59898 -145529390 - L1MA4A LINE L1 -7 6147 4373 2720 98 0 6 chr10 59898 60264 -145529024 + THE1B LTR MaLR 1 364 0 6384 154 24 75 chr10 60264 60646 -145528642 - L1MA4A LINE L1 -1781 4373 3973 288 330 17 0 chr10 62383 62501 -145526787 - L1MEc LINE L1 -6068 328 209 402 21 0 0 chr10 62502 62549 -145526739 + (TTA)n Simple_repeat Simple_repeat 2 48 0 1978 58 0 0 chr10 62558 62798 -145526490 - AluY SINE Alu -37 274 35 5520 42 0 0 chr10 63095 63770 -145525518 - L1P LINE L1 -2255 3891 3217 19034 70 11 0 chr10 63771 66217 -145523071 + L1P LINE L1 449 2921 -3225 485 205 197 0 chr10 66870 66987 -145522301 + MER82 DNA MER2_type 4 143 -510 1861 216 28 56 chr10 67431 67895 -145521393 + MER82 DNA MER2_type 200 650 -3 662 126 0 0 chr10 68076 68163 -145521125 - 5S rRNA rRNA -31 90 4 828 145 0 0 chr10 68589 68713 -145520575 + FLAM_C SINE Alu 1 124 -19 21 0 0 0 chr10 68968 68989 -145520299 + AT_rich Low_complexity Low_complexity 1 21 0 634 273 45 0 chr10 69258 69434 -145519854 + MER20 DNA MER1_type 7 190 -29 424 290 3 30 chr10 69573 69947 -145519341 + G-rich Low_complexity Low_complexity 1 363 0 * 511 251 17 33 chr10 69883 70153 -145519135 + GA-rich Low_complexity Low_complexity 1 265 0 444 164 0 0 chr10 70223 70290 -145518998 - AluJ/FLAM SINE Alu -240 72 6 770 146 0 49 chr10 70318 70462 -145518826 - FLAM_C SINE Alu 0 143 7 266 256 31 19 chr10 70495 70655 -145518633 + L1M4 LINE L1 4348 4509 -1637 1646 232 96 15 chr10 70694 71280 -145518008 + L1M4 LINE L1 4740 5372 -774 1795 156 3 0 chr10 71284 71572 -145517716 + AluSx SINE Alu 3 291 -21 296 242 110 11 chr10 71584 71669 -145517619 + MLT1D LTR MaLR 278 371 -134 349 230 80 35 chr10 71669 71782 -145517506 + LTR35 LTR ERV1 1 118 -500 327 253 11 11 chr10 71909 72000 -145517288 + LTR58 LTR ERV1 350 440 -239 468 254 51 0 chr10 72157 72275 -145517013 + LTR35 LTR ERV1 495 618 0 * 734 176 0 14 chr10 72275 72393 -145516895 + MLT1C LTR MaLR 280 467 0 747 50 0 0 chr10 74282 74382 -145514906 + (CA)n Simple_repeat Simple_repeat 2 101 0 202 179 54 0 chr10 75914 75970 -145513318 + (CATCC)n Simple_repeat Simple_repeat 4 62 0 246 264 0 0 chr10 77070 77176 -145512112 + (CA)n Simple_repeat Simple_repeat 1 106 0 205 211 0 22 chr10 77347 77437 -145511851 + (CA)n Simple_repeat Simple_repeat 1 88 0 331 246 57 74 chr10 79605 79727 -145509561 - MIR SINE MIR -62 200 81 1980 129 0 13 chr10 79741 80050 -145509238 - AluSx SINE Alu -7 305 1 234 148 113 0 chr10 81200 81256 -145508032 - MIR SINE MIR -61 147 91 373 172 21 86 chr10 81502 81595 -145507693 + AluSg/x SINE Alu 204 290 -10 184 312 75 65 chr10 81604 81697 -145507591 + MIR3 SINE MIR 113 206 -2 360 77 0 0 chr10 82218 82270 -145507018 + (CA)n Simple_repeat Simple_repeat 2 53 0 559 206 89 48 chr10 82697 82843 -145506445 - FAM SINE Alu -20 165 14 815 176 14 0 chr10 83826 83954 -145505334 + AluJb SINE Alu 2 134 -178 2050 139 0 0 chr10 83954 84256 -145505032 + AluSx SINE Alu 1 302 -10 815 176 14 0 chr10 84256 84269 -145505019 + AluJb SINE Alu 134 145 -167 4144 195 84 5 chr10 84271 85602 -145503686 - MER52A LTR ERV1 -2 1753 177 325 326 11 80 chr10 86275 86450 -145502838 + L1MC5 LINE L1 7769 7931 -30 444 37 0 0 chr10 86744 86798 -145502490 + (CA)n Simple_repeat Simple_repeat 2 55 0 1828 139 75 33 chr10 87606 87965 -145501323 - THE1C LTR MaLR -1 374 1 2199 92 3 22 chr10 87966 88283 -145501005 - THE1C-int LTR MaLR -1 1579 1269 283 100 0 83 chr10 88289 88349 -145500939 - L1PA10 LINE L1 -4 6164 6110 819 131 0 0 chr10 88359 88489 -145500799 - L1M2 LINE L1 -818 5473 5344 739 153 6 102 chr10 88488 88665 -145500623 + L1 LINE L1 3802 3961 -2185 * 456 196 140 0 chr10 88784 88891 -145500397 + L1 LINE L1 3975 4096 -2050 655 149 53 0 chr10 88891 89005 -145500283 - MSTB1 LTR MaLR 0 432 313 7497 126 8 68 chr10 89005 90430 -145498858 - THE1C-int LTR MaLR -299 1352 1 1684 145 99 34 chr10 90430 90782 -145498506 - THE1C LTR MaLR 0 375 1 1084 149 99 27 chr10 91053 91275 -145498013 + MER4B LTR ERV1 1 238 -372 10215 92 3 8 chr10 91277 91447 -145497841 - HERVL-A2 LTR ERVL -4306 1348 1179 2142 112 0 0 chr10 91447 91751 -145497537 - AluY SINE Alu -7 304 1 10215 92 3 8 chr10 91751 92935 -145496353 - HERVL-A2 LTR ERVL -4475 1179 1 2911 110 50 11 chr10 92935 93371 -145495917 - MLT2A2 LTR ERVL 0 453 1 2214 106 0 0 chr10 93538 93841 -145495447 - AluSx SINE Alu -9 303 1 23 78 0 0 chr10 93894 93945 -145495343 + AT_rich Low_complexity Low_complexity 1 51 0 1389 180 71 4 chr10 93949 94216 -145495072 + AluJb SINE Alu 4 288 -24 1310 194 110 68 chr10 94368 94723 -145494565 + MLT1A2 LTR MaLR 1 370 -4 237 316 61 10 chr10 95123 95221 -145494067 + MIR SINE MIR 82 184 -78 1837 143 85 109 chr10 95590 95840 -145493448 + MER4B LTR ERV1 3 239 -371 2247 82 0 7 chr10 95840 96144 -145493144 + AluY SINE Alu 10 311 0 1837 143 85 109 chr10 96144 96353 -145492935 + MER4B LTR ERV1 239 451 -159 7006 237 84 26 chr10 96789 98368 -145490920 - MER52A LTR ERV1 0 1755 85 3974 170 30 30 chr10 98707 99424 -145489864 - MER4E LTR ERV1 -3 776 57 3933 153 9 8 chr10 99424 100058 -145489230 - MER41B LTR ERV1 0 635 1 3974 170 30 30 chr10 100058 100116 -145489172 - MER4E LTR ERV1 -721 58 1 223 196 22 0 chr10 100436 100482 -145488806 + GA-rich Low_complexity Low_complexity 2 48 0 46 19 0 0 chr10 101256 101309 -145487979 + AT_rich Low_complexity Low_complexity 1 53 0 2197 112 0 0 chr10 101417 101720 -145487568 - AluSx SINE Alu -9 303 1 1941 111 7 7 chr10 101791 102071 -145487217 - AluSq SINE Alu -33 280 1 662 219 128 27 chr10 102263 102450 -145486838 - MER3 DNA MER1_type -3 206 1 2066 134 0 0 chr10 103215 103532 -145485756 - AluSx SINE Alu 0 317 1 2019 137 137 8 chr10 103603 103982 -145485306 - MSTA LTR MaLR 0 428 1 207 250 19 0 chr10 104373 104425 -145484863 + (TA)n Simple_repeat Simple_repeat 2 54 0 4907 192 76 14 chr10 104652 105913 -145483375 + L1MC1 LINE L1 570 1751 -4675 318 50 0 0 chr10 105913 105953 -145483335 + (TG)n Simple_repeat Simple_repeat 1 40 0 4907 192 76 14 chr10 105953 107120 -145482168 + L1MC1 LINE L1 1751 3246 -3180 4661 235 24 47 chr10 107116 107366 -145481922 + L1MC1 LINE L1 4164 4418 -2008 * 1840 184 16 27 chr10 107366 107735 -145481553 - MLT1A1 LTR MaLR 0 365 1 4661 235 24 47 chr10 107735 108967 -145480321 + L1MC1 LINE L1 4418 5612 -814 1221 183 48 28 chr10 108967 109219 -145480069 + AluJo SINE Alu 45 301 -11 4305 166 23 7 chr10 109222 109995 -145479293 + L1MC1 LINE L1 5595 6380 -233 1612 134 7 29 chr10 110499 110775 -145478513 + L1MC1 LINE L1 6056 6325 -8 2063 100 0 4 chr10 110804 111085 -145478203 + AluSq SINE Alu 30 309 -4 24 0 0 0 chr10 111236 111260 -145478028 + AT_rich Low_complexity Low_complexity 1 24 0 182 298 43 32 chr10 112294 112388 -145476900 - L2 LINE L2 -291 2981 2887 427 298 16 8 chr10 112546 112670 -145476618 + L2 LINE L2 3189 3313 0 1072 245 14 34 chr10 113236 113587 -145475701 - L1MEc LINE L1 -4286 2110 1767 23 54 0 0 chr10 114071 114108 -145475180 + AT_rich Low_complexity Low_complexity 1 37 0 2180 99 0 7 chr10 115896 116190 -145473098 - AluSg SINE Alu -18 292 1 1770 154 7 3 chr10 116831 117116 -145472172 + AluSx SINE Alu 5 290 -22 1523 231 111 55 chr10 118676 119655 -145469633 - L1MC5 LINE L1 -449 7512 6476 2219 110 7 3 chr10 121026 121334 -145467954 + AluSq SINE Alu 5 313 0 586 200 0 8 chr10 121496 121626 -145467662 - AluSg/x SINE Alu -7 302 174 398 316 172 5 chr10 122413 122628 -145466660 - MIR SINE MIR 0 262 12 327 260 102 16 chr10 122716 122843 -145466445 - MIR SINE MIR -65 197 60 500 288 112 0 chr10 123292 123462 -145465826 - MIR SINE MIR -66 196 8 311 313 51 28 chr10 124113 124547 -145464741 - L1M4 LINE L1 -748 5398 4955 233 261 52 96 chr10 124715 124830 -145464458 + L2 LINE L2 3197 3306 -7 193 288 51 0 chr10 124913 124972 -145464316 + MIR SINE MIR 64 125 -83 1762 202 93 134 chr10 124985 125305 -145463983 - L1ME1 LINE L1 -88 6078 5747 1654 149 4 39 chr10 125305 125586 -145463702 - AluJb SINE Alu -21 291 21 559 138 0 0 chr10 125586 125673 -145463615 - AluJ/FLAM SINE Alu -225 87 1 1762 202 93 134 chr10 125673 126125 -145463163 - L1ME1 LINE L1 -417 5749 5254 437 351 69 48 chr10 126149 126568 -145462720 + HAL1 LINE L1 1236 1663 -844 640 241 73 5 chr10 126750 126941 -145462347 + L1ME3A LINE L1 5746 5949 -221 535 143 9 9 chr10 130544 130656 -145458632 + CT-rich Low_complexity Low_complexity 2 113 0 246 253 118 51 chr10 130700 130766 -145458522 - L1ME LINE L1 -213 5908 5848 1431 193 39 18 chr10 130766 131051 -145458237 - AluJb SINE Alu -21 291 1 246 253 118 51 chr10 131051 131162 -145458126 - L1ME LINE L1 -273 5848 5719 1239 127 0 0 chr10 131185 131350 -145457938 - AluJ SINE Alu -14 298 134 235 237 0 0 chr10 131484 131522 -145457766 - FLAM_C SINE Alu 0 170 133 180 0 0 0 chr10 131524 131544 -145457744 + (TG)n Simple_repeat Simple_repeat 2 21 0 535 104 72 13 chr10 131547 131771 -145457517 + (TA)n Simple_repeat Simple_repeat 1 237 0 803 154 24 0 chr10 131771 131894 -145457394 - FLAM_C SINE Alu -6 127 2 314 298 130 19 chr10 131946 132154 -145457134 - L1ME LINE L1 -479 5642 5412 189 0 0 0 chr10 132904 132925 -145456363 + (CA)n Simple_repeat Simple_repeat 2 22 0 21 36 0 0 chr10 134374 134402 -145454886 + AT_rich Low_complexity Low_complexity 1 28 0 283 358 0 0 chr10 134432 134541 -145454747 + L1M4 LINE L1 4031 4139 -2007 366 293 37 16 chr10 134615 134803 -145454485 + L1M4 LINE L1 4334 4525 -1621 252 291 0 0 chr10 134841 134927 -145454361 + L1M4 LINE L1 4616 4701 -1445 296 331 37 25 chr10 135258 135421 -145453867 - L1MC/D LINE L1 -1983 5825 5661 348 246 129 75 chr10 135604 135884 -145453404 - L1 LINE L1 -1646 4500 4206 432 331 106 51 chr10 135973 136541 -145452747 - L1 LINE L1 -2139 4007 3409 1784 184 3 0 chr10 136727 137031 -145452257 + AluJb SINE Alu 1 305 -7 2278 91 0 0 chr10 137397 137684 -145451604 + AluSx SINE Alu 1 287 -25 21 0 0 0 chr10 138140 138161 -145451127 + AT_rich Low_complexity Low_complexity 1 21 0 6255 37 5 0 chr10 138161 138914 -145450374 - L1PA3 LINE L1 0 6155 5399 * 7906 31 5 0 chr10 138905 139866 -145449422 + L1PA3 LINE L1 4430 5395 -751 490 197 88 15 chr10 140139 140276 -145449012 - HAL1b LINE L1 -853 495 349 273 163 0 0 chr10 140322 140371 -145448917 + (TATATG)n Simple_repeat Simple_repeat 5 53 0 1767 123 12 108 chr10 142200 142533 -145446755 + AluJo SINE Alu 1 301 -11 445 311 41 18 chr10 143804 144012 -145445276 + MIR SINE MIR 3 209 -53 514 265 15 103 chr10 144439 144643 -145444645 + MER91B DNA MER1_type 4 189 -1 713 189 8 0 chr10 145645 145767 -145443521 + FLAM_A SINE Alu 1 123 -10 2025 149 0 0 chr10 146871 147173 -145442115 - AluJo SINE Alu -5 307 6 32 26 0 0 chr10 148180 148219 -145441069 + AT_rich Low_complexity Low_complexity 1 39 0 1727 146 79 7 chr10 148574 148854 -145440434 + AluSx SINE Alu 1 300 -12 757 296 71 0 chr10 148984 149224 -145440064 - MIR SINE MIR 0 262 6 2147 108 0 29 chr10 154355 154661 -145434627 - AluSx SINE Alu -15 297 1 180 125 0 0 chr10 154746 154778 -145434510 + (TTTTC)n Simple_repeat Simple_repeat 2 33 0 1556 191 16 3 chr10 156666 156969 -145432319 - AluJo SINE Alu -5 307 1 355 241 259 0 chr10 157215 157381 -145431907 + MER3 DNA MER1_type 1 209 0 322 157 0 0 chr10 157342 157393 -145431895 - MER3 DNA MER1_type -123 86 36 * 311 297 78 99 chr10 161439 161516 -145427772 + MER5A DNA MER1_type 2 79 -110 2359 99 0 0 chr10 161516 161819 -145427469 + AluSg SINE Alu 3 305 -5 311 297 78 99 chr10 161819 161933 -145427355 + MER5A DNA MER1_type 79 189 0 224 330 187 0 chr10 162165 162256 -145427032 - L2 LINE L2 -8 3305 3198 1341 198 53 14 chr10 162276 162559 -145426729 + MER58B DNA MER1_type 48 341 0 389 259 9 36 chr10 164409 164521 -145424767 + MER5B DNA MER1_type 15 123 -55 397 259 103 73 chr10 164533 164765 -145424523 - L1ME2 LINE L1 -10 6154 5916 288 0 0 0 chr10 166300 166332 -145422956 + (TG)n Simple_repeat Simple_repeat 1 32 0 229 70 23 93 chr10 166348 166391 -145422897 + L1MA8 LINE L1 6120 6159 -132 376 172 103 11 chr10 166393 166480 -145422808 + L1MA8 LINE L1 6191 6285 -6 * 437 266 87 17 chr10 166449 166690 -145422598 - L1MC4a LINE L1 -1341 6467 6210 1028 95 0 0 chr10 168682 168819 -145420469 + FLAM_C SINE Alu 1 137 -6 26 0 0 0 chr10 169592 169618 -145419670 + AT_rich Low_complexity Low_complexity 1 26 0 1846 152 10 3 chr10 169895 170191 -145419097 + AluJo SINE Alu 13 310 -2 2548 44 0 0 chr10 170290 170587 -145418701 + AluY SINE Alu 1 297 -14 30 0 0 0 chr10 171088 171118 -145418170 + AT_rich Low_complexity Low_complexity 1 30 0 1943 147 3 20 chr10 171242 171548 -145417740 + AluJb SINE Alu 1 301 -11 338 283 0 0 chr10 173802 173894 -145415394 + L1MC4 LINE L1 6610 6701 -1341 * 342 299 0 0 chr10 173827 173914 -145415374 - L1MC4 LINE L1 -1340 6702 6616 304 234 10 15 chr10 173923 174028 -145415260 + L1MC4 LINE L1 1995 6983 -1339 863 159 12 40 chr10 174032 174245 -145415043 - L1P4 LINE L1 -355 5801 5604 26 64 0 0 chr10 174281 174328 -145414960 + AT_rich Low_complexity Low_complexity 1 47 0 8205 84 5 7 chr10 175081 176199 -145413089 + L1P LINE L1 1655 2769 -3377 2448 62 0 13 chr10 176357 176661 -145412627 - AluY SINE Alu -11 300 1 23 54 0 0 chr10 176967 177004 -145412284 + AT_rich Low_complexity Low_complexity 1 37 0 180 0 0 0 chr10 178230 178250 -145411038 + (T)n Simple_repeat Simple_repeat 1 20 0 201 74 0 0 chr10 179941 179968 -145409320 + (TCC)n Simple_repeat Simple_repeat 1 27 0 807 11 0 0 chr10 184647 184737 -145404551 - 5S rRNA rRNA -31 90 1 229 299 143 0 chr10 186821 186898 -145402390 + L2 LINE L2 3160 3247 -25 1965 211 70 2 chr10 187008 187496 -145401792 + L1MA9 LINE L1 5792 6312 0 717 191 140 0 chr10 189637 189773 -145399515 - AluJb SINE Alu -11 301 147 186 43 0 0 chr10 190281 190304 -145398984 + (CAAAAA)n Simple_repeat Simple_repeat 2 24 0 1128 237 110 52 chr10 190314 190761 -145398527 + MLT1J LTR MaLR 1 473 -38 1565 207 7 10 chr10 191807 192102 -145397186 - AluJb SINE Alu -18 294 1 2634 40 0 0 chr10 194899 195200 -145394088 - AluY SINE Alu -10 301 1 22 0 0 0 chr10 195482 195504 -145393784 + AT_rich Low_complexity Low_complexity 1 22 0 2371 92 0 0 chr10 196769 197064 -145392224 + AluSc SINE Alu 2 296 -13 2168 119 0 7 chr10 197729 198023 -145391265 - AluJb SINE Alu -19 293 2 234 167 37 19 chr10 198244 198298 -145390990 - MER5A DNA MER1_type -122 67 13 364 228 20 30 chr10 199739 199840 -145389448 + MIR SINE MIR 162 261 -1 2264 90 0 0 chr10 200131 200419 -145388869 + AluY SINE Alu 1 288 -23 24 77 0 0 chr10 200721 200773 -145388515 + AT_rich Low_complexity Low_complexity 1 52 0 248 323 156 49 chr10 202127 202390 -145386898 + L2 LINE L2 2894 3184 -88 423 152 0 0 chr10 203060 203126 -145386162 - MADE1 DNA Mariner -14 66 1 229 195 69 81 chr10 204639 204726 -145384562 - L1MB3 LINE L1 -1 6182 6097 528 240 14 4 chr10 206559 206768 -145382520 - MER65C LTR ERV1 -159 302 1 826 201 0 13 chr10 206827 206981 -145382307 + FRAM SINE Alu 1 152 -14 1391 201 47 0 chr10 209273 209552 -145379736 + AluJb SINE Alu 21 312 0 23 0 0 0 chr10 209643 209666 -145379622 + AT_rich Low_complexity Low_complexity 1 23 0 1226 133 55 62 chr10 209688 210030 -145379258 + L1MA5A LINE L1 5083 5427 -743 580 165 0 10 chr10 210043 210146 -145379142 - MER41B LTR ERV1 -88 547 446 1225 112 0 51 chr10 210146 210208 -145379080 + L1MA5A LINE L1 5413 5477 -820 2425 71 0 0 chr10 210208 210518 -145378770 + AluY SINE Alu 1 310 -1 1225 112 0 51 chr10 210518 210652 -145378636 + L1MA5A LINE L1 5477 5599 -698 796 115 0 18 chr10 210658 210771 -145378517 + AluSg SINE Alu 37 147 -163 3399 46 2 0 chr10 210771 211202 -145378086 - L1PA5 LINE L1 -748 5398 4967 6157 51 0 0 chr10 211202 211946 -145377342 + L1PA5 LINE L1 5410 6154 0 968 99 56 0 chr10 211946 212113 -145377175 + AluSg SINE Alu 134 308 0 294 29 0 0 chr10 212132 212167 -145377121 + (CA)n Simple_repeat Simple_repeat 1 35 0 3365 169 75 5 chr10 212168 212823 -145376465 + L1MA5A LINE L1 5596 6296 -1 1552 250 136 8 chr10 212824 213420 -145375868 - L1MC3 LINE L1 -3 7782 7111 895 238 117 67 chr10 213895 214357 -145374931 - L1MC4 LINE L1 -6 8036 7552 22 0 0 0 chr10 214368 214390 -145374898 + AT_rich Low_complexity Low_complexity 1 22 0 3486 186 49 47 chr10 214390 215415 -145373873 + L1MB3 LINE L1 4985 6028 -155 180 320 0 13 chr10 215896 215974 -145373314 - L2 LINE L2 -1279 2035 1959 378 328 143 0 chr10 217069 217258 -145372030 - MIR SINE MIR -16 246 31 1510 237 105 5 chr10 217418 217819 -145371469 - Tigger3b DNA MER2_type 0 1231 791 245 222 19 0 chr10 217915 217969 -145371319 - Tigger3b DNA MER2_type -386 845 791 * 270 178 0 0 chr10 217966 218011 -145371277 - Tigger3b DNA MER2_type -386 845 801 2822 193 97 50 chr10 218172 218396 -145370892 - Tigger3b DNA MER2_type -2184 844 632 2380 78 3 0 chr10 218396 218705 -145370583 - AluSp SINE Alu -3 310 1 2822 193 97 50 chr10 218705 219285 -145370003 - Tigger3b DNA MER2_type -2396 632 2 204 320 51 0 chr10 219408 219486 -145369802 + (CATG)n Simple_repeat Simple_repeat 1 82 0 376 255 27 20 chr10 219537 219686 -145369602 + (CA)n Simple_repeat Simple_repeat 1 150 0 319 320 11 22 chr10 220047 220225 -145369063 + (CA)n Simple_repeat Simple_repeat 1 176 0 1488 203 0 7 chr10 220530 220811 -145368477 - AluJo SINE Alu -20 292 14 29 0 0 0 chr10 220848 220877 -145368411 + AT_rich Low_complexity Low_complexity 1 29 0 1710 193 97 0 chr10 221751 222124 -145367164 + MSTB1 LTR MaLR 24 432 0 297 248 116 16 chr10 223758 223879 -145365409 - MER20 DNA MER1_type -60 159 27 1886 136 27 0 chr10 224431 224725 -145364563 - AluSx SINE Alu -10 302 1 1538 195 82 0 chr10 228282 228600 -145360688 - MER2 DNA MER2_type 0 344 1 831 208 72 22 chr10 229537 229804 -145359484 - MLT1A1 LTR MaLR -7 367 1 492 303 123 44 chr10 230010 230350 -145358938 - L1MCc LINE L1 -4410 2712 2346 644 287 82 51 chr10 230481 231114 -145358174 - L1MCc LINE L1 -4887 1536 1252 331 317 127 17 chr10 231583 231883 -145357405 - L1MCc LINE L1 -6074 349 17 22 0 0 0 chr10 231885 231907 -145357381 + AT_rich Low_complexity Low_complexity 1 22 0 320 284 23 0 chr10 232117 232205 -145357083 + MER58 DNA MER1_type 177 266 -2154 1941 133 0 29 chr10 233717 234026 -145355262 - AluSx SINE Alu -12 300 1 1851 110 0 4 chr10 235076 235339 -145353949 + AluSg SINE Alu 36 297 -13 843 152 0 14 chr10 235450 235595 -145353693 + FLAM_C SINE Alu 1 143 0 305 212 169 8 chr10 237441 237559 -145351729 + L1ME4a LINE L1 5985 6121 0 2040 121 0 0 chr10 238798 239103 -145350185 + AluY SINE Alu 1 305 -6 1820 131 12 44 chr10 239714 240034 -145349254 + AluJb SINE Alu 1 310 -2 679 195 0 17 chr10 241396 241514 -145347774 - FLAM_A SINE Alu -17 116 1 489 151 244 34 chr10 243859 243978 -145345310 + MER58A DNA MER1_type 46 189 -35 600 209 118 13 chr10 244536 244689 -145344599 - MER20 DNA MER1_type -9 210 42 568 252 167 9 chr10 244689 244899 -145344389 - L2 LINE L2 -1366 1948 1706 24 0 0 0 chr10 245507 245531 -145343757 + AT_rich Low_complexity Low_complexity 1 24 0 2066 93 3 23 chr10 248103 248404 -145340884 + AluSx SINE Alu 1 295 -17 190 380 120 9 chr10 248836 248944 -145340344 - MIR SINE MIR -141 121 2 380 159 439 8 chr10 249167 249299 -145339989 - MER5A DNA MER1_type 0 189 1 367 235 161 37 chr10 249525 249687 -145339601 - MER5A DNA MER1_type 0 189 8 854 197 175 11 chr10 249758 250027 -145339261 - MER33 DNA MER1_type 0 324 12 269 282 27 45 chr10 250609 250719 -145338569 - L2 LINE L2 -24 3289 3182 203 273 0 0 chr10 251440 251484 -145337804 + (TATG)n Simple_repeat Simple_repeat 4 47 0 742 186 0 0 chr10 251544 251668 -145337620 + FLAM_C SINE Alu 5 128 -5 3003 163 61 40 chr10 252292 252919 -145336369 - LTR49-int LTR ERV1 -3127 3204 2565 2252 82 0 25 chr10 252924 253243 -145336045 + AluY SINE Alu 1 311 0 1984 127 14 0 chr10 253271 253563 -145335725 - AluSg1 SINE Alu -13 296 1 1876 239 57 11 chr10 253563 254095 -145335193 - LTR49-int LTR ERV1 -3858 2473 1839 646 150 74 104 chr10 254144 254298 -145334990 - LTR49-int LTR ERV1 -2645 2235 2078 1923 113 46 0 chr10 254298 254580 -145334708 + AluSc SINE Alu 3 297 -12 646 150 74 104 chr10 254580 254671 -145334617 - LTR49-int LTR ERV1 -2802 2078 1501 262 146 0 36 chr10 254670 254725 -145334563 - LTR49-int LTR ERV1 -4996 1335 1283 * 274 268 42 0 chr10 254725 254796 -145334492 - tRNA-Glu-GAG tRNA tRNA 0 75 2 283 244 13 13 chr10 254818 254896 -145334392 - LTR49-int LTR ERV1 -5138 1193 1116 338 156 0 31 chr10 255022 255086 -145334202 - LTR49-int LTR ERV1 -3690 1181 1120 3244 134 10 4 chr10 255839 256333 -145332955 - LOR1a LTR ERV1 0 497 1 1330 157 19 83 chr10 256504 256637 -145332651 - LTR56 LTR ERV1 -1 444 304 2307 128 0 0 chr10 256637 256949 -145332339 - AluSx SINE Alu 0 312 1 1330 157 19 83 chr10 256949 257127 -145332161 - LTR56 LTR ERV1 -141 304 153 888 198 20 20 chr10 258068 258270 -145331018 - LTR56 LTR ERV1 -234 211 10 7473 37 6 7 chr10 258271 259491 -145329797 + L1PA5 LINE L1 4932 6151 -3 439 191 64 0 chr10 259502 259612 -145329676 - LTR37A LTR ERV1 -264 162 46 449 262 162 80 chr10 259698 260339 -145328949 + L1MC4a LINE L1 5326 6019 -1789 945 260 60 0 chr10 261718 261999 -145327289 + MER58B DNA MER1_type 34 331 -10 275 327 27 9 chr10 262661 262771 -145326517 - MER5A DNA MER1_type -74 115 4 2108 128 3 0 chr10 264832 265129 -145324159 + AluSc SINE Alu 1 298 -11 285 208 69 0 chr10 366477 366549 -145222739 - L1MCa LINE L1 -4493 1933 1857 * 562 186 57 0 chr10 366536 366660 -145222628 - L1MCa LINE L1 -5299 1127 997 520 252 32 13 chr10 366666 366821 -145222467 - L1MCa LINE L1 -6250 176 19 471 319 96 21 chr10 366833 367021 -145222267 - L1M4 LINE L1 -2999 3147 2946 1668 176 20 3 chr10 367168 367463 -145221825 - AluJo SINE Alu -12 300 1 351 273 94 0 chr10 368633 368761 -145220527 - Charlie1 DNA MER1_type 0 2761 2622 231 297 102 8 chr10 368828 368956 -145220332 - Charlie1 DNA MER1_type -2602 159 20 24934 92 22 3 chr10 370205 374106 -145215182 + L1PA7 LINE L1 1527 5499 -673 1879 88 60 0 chr10 374208 374476 -145214812 + L1M1 LINE L1 5498 5793 -401 16957 31 10 0 chr10 374476 377249 -145212039 + L1PA2 LINE L1 3372 6153 -2 1879 88 60 0 chr10 377249 377281 -145212007 + L1M1 LINE L1 5793 5822 -372 2879 87 0 3 chr10 377285 377665 -145211623 + L1PA7 LINE L1 5769 6147 -7 2116 108 3 48 chr10 378185 378499 -145210789 + AluSp SINE Alu 1 300 -13 2252 123 0 0 chr10 379022 379323 -145209965 - AluSx SINE Alu -11 301 1 222 403 86 0 chr10 379381 379567 -145209721 + L2 LINE L2 2656 2857 -457 306 318 34 0 chr10 379607 379695 -145209593 - L2 LINE L2 -41 3272 3182 319 296 30 24 chr10 379740 379909 -145209379 + (TAGA)n Simple_repeat Simple_repeat 3 172 0 273 250 15 15 chr10 380489 380557 -145208731 + MIR SINE MIR 81 148 -114 1203 115 6 22 chr10 381457 381640 -145207648 - AluSq SINE Alu -10 303 124 24 96 0 0 chr10 382644 382717 -145206571 + AT_rich Low_complexity Low_complexity 1 73 0 590 290 180 56 chr10 383989 384600 -145204688 - HAL1 LINE L1 -404 2103 1417 2062 144 3 7 chr10 387493 387798 -145201490 - AluSg SINE Alu -6 304 1 1797 150 28 0 chr10 391987 392273 -145197015 - AluJo SINE Alu -18 294 1 2556 68 10 0 chr10 395732 396040 -145193248 - AluY SINE Alu 0 311 1 206 279 15 29 chr10 396568 396636 -145192652 - MIR SINE MIR -118 144 78 241 67 133 0 chr10 400730 400775 -145188513 + Alu SINE Alu 238 288 -14 2694 209 39 46 chr10 402904 403620 -145185668 + L1MA9 LINE L1 5495 6205 -107 630 227 85 0 chr10 403765 403941 -145185347 + MER2 DNA MER2_type 1 191 -154 229 279 58 0 chr10 404164 404250 -145185038 + MER2 DNA MER2_type 101 191 -154 243 260 52 0 chr10 404562 404639 -145184649 + MER2 DNA MER2_type 101 181 -164 273 264 46 0 chr10 404803 404890 -145184398 + MER2 DNA MER2_type 101 191 -154 245 250 66 0 chr10 404883 404959 -145184329 + MER2 DNA MER2_type 101 181 -164 * 756 245 46 33 chr10 404962 405007 -145184281 + MER2 DNA MER2_type 101 144 -201 2181 103 0 3 chr10 405007 405289 -145183999 + AluY SINE Alu 1 281 -30 180 0 0 0 chr10 405291 405311 -145183977 + (CAAT)n Simple_repeat Simple_repeat 2 21 0 756 245 46 33 chr10 405311 405503 -145183785 + MER2 DNA MER2_type 144 344 -1 1689 176 25 0 chr10 406046 406330 -145182958 - AluJb SINE Alu -21 291 1 921 167 12 153 chr10 407511 407960 -145181328 - THE1B LTR MaLR 0 364 1 191 217 87 0 chr10 408690 408736 -145180552 - L2 LINE L2 -2 3311 3262 314 314 34 17 chr10 409907 410025 -145179263 - L2 LINE L2 0 3313 3194 1770 180 18 7 chr10 410027 410311 -145178977 + AluJb SINE Alu 1 287 -25 464 299 61 30 chr10 410513 410677 -145178611 + L1M4 LINE L1 2921 3089 -3057 472 319 91 7 chr10 410692 411095 -145178193 + L1M4 LINE L1 4160 4607 -1539 226 235 99 0 chr10 411485 411566 -145177722 + L1M LINE L1 5301 5389 -970 231 36 0 0 chr10 413135 413163 -145176125 + (TTCA)n Simple_repeat Simple_repeat 1 28 0 317 222 103 34 chr10 417467 417584 -145171704 - MIR SINE MIR -115 147 23 263 324 131 14 chr10 418297 418442 -145170846 - MIR SINE MIR -1 261 100 1632 158 9 85 chr10 420442 420771 -145168517 + AluJb SINE Alu 1 304 -8 2171 122 6 16 chr10 420798 421109 -145168179 + AluSq SINE Alu 1 308 -5 1967 159 3 7 chr10 423605 423914 -145165374 + AluSx SINE Alu 1 308 -4 348 117 39 0 chr10 424505 424582 -145164706 + G-rich Low_complexity Low_complexity 1 80 0 1070 206 81 12 chr10 426615 426935 -145162353 + MLT1A1 LTR MaLR 23 364 -1 184 266 47 0 chr10 429671 429735 -145159553 + MIR SINE MIR 45 111 -97 3886 242 67 1 chr10 429952 431007 -145158281 - L1MC1 LINE L1 -1 6332 5208 244 304 20 0 chr10 432607 432709 -145156579 + (TA)n Simple_repeat Simple_repeat 1 104 0 223 200 246 0 chr10 434021 434131 -145155157 - MER5A DNA MER1_type -18 171 35 230 289 60 0 chr10 436249 436332 -145152956 + MLT1J LTR MaLR 346 433 -78 743 173 7 14 chr10 437971 438110 -145151178 - AluJb SINE Alu -19 293 156 960 134 0 0 chr10 438725 438859 -145150429 + FLAM_C SINE Alu 6 139 -4 244 114 23 23 chr10 438924 438968 -145150320 + MER101B LTR ERV1 13 56 -514 642 273 84 8 chr10 439170 439408 -145149880 + LTR51 LTR ERV1 228 483 -188 369 316 0 0 chr10 440743 440980 -145148308 + GA-rich Low_complexity Low_complexity 1 237 0 699 166 0 64 chr10 440987 441204 -145148084 - AluJb SINE Alu -36 276 1 767 157 40 26 chr10 441724 441952 -145147336 + MER4A LTR ERV1 1 303 -361 363 140 10 194 chr10 441958 442089 -145147199 + MER4B LTR ERV1 517 610 0 2914 13 0 0 chr10 442850 443160 -145146128 - AluYb8 SINE Alu -8 310 1 816 262 112 29 chr10 444190 444575 -145144713 - MLT1C LTR MaLR -4 463 47 257 241 108 0 chr10 444707 444790 -145144498 - MLT1C LTR MaLR -366 101 10 1978 132 10 3 chr10 445978 446274 -145143014 - AluSx SINE Alu -14 298 1 1505 189 22 11 chr10 446352 446627 -145142661 - AluJo SINE Alu -22 290 13 1216 241 89 0 chr10 447446 447749 -145141539 - MER2 DNA MER2_type -14 331 2 567 212 196 6 chr10 448729 448908 -145140380 + L1MB3 LINE L1 5970 6182 -1 975 260 19 11 chr10 451924 452193 -145137095 - L1MB7 LINE L1 -19 6165 5895 2257 207 105 25 chr10 452396 453193 -145136095 - L1MB7 LINE L1 -274 5904 5020 987 210 75 68 chr10 453193 453336 -145135952 + MLT1B LTR MaLR 1 141 -249 2056 125 57 0 chr10 453336 453632 -145135656 - AluSq SINE Alu 0 313 1 987 210 75 68 chr10 453632 453873 -145135415 + MLT1B LTR MaLR 141 388 -2 2257 207 105 25 chr10 453873 453994 -145135294 - L1MB7 LINE L1 -1158 5020 4910 331 167 121 0 chr10 454098 454164 -145135124 - Charlie1 DNA MER1_type 0 2761 2688 2091 127 13 16 chr10 454171 454479 -145134809 + AluSx SINE Alu 1 307 -5 1347 292 155 4 chr10 454479 455215 -145134073 - Charlie1 DNA MER1_type -150 2611 1765 267 168 20 10 chr10 456621 456722 -145132566 + (CAGG)n Simple_repeat Simple_repeat 2 103 0 243 0 0 0 chr10 457088 457115 -145132173 + (A)n Simple_repeat Simple_repeat 1 27 0 416 280 40 40 chr10 457380 457555 -145131733 - MER106A DNA MER1_type -16 220 46 434 245 83 31 chr10 458147 458183 -145131105 - MER3 DNA MER1_type -1 208 175 2198 129 7 0 chr10 458183 458486 -145130802 - AluSx SINE Alu -7 305 1 434 245 83 31 chr10 458486 458641 -145130647 - MER3 DNA MER1_type -34 175 7 2349 83 3 0 chr10 460745 461033 -145128255 + AluY SINE Alu 1 289 -22 184 321 19 0 chr10 463848 463901 -145125387 + MER5A DNA MER1_type 67 120 -69 247 252 28 19 chr10 467054 467161 -145122127 + CT-rich Low_complexity Low_complexity 2 109 0 2234 164 108 24 chr10 467805 468364 -145120924 + MER4B LTR ERV1 1 903 0 2372 238 81 49 chr10 470561 471393 -145117895 + Cheshire DNA MER1_type 509 1366 -1054 459 248 153 0 chr10 471481 471618 -145117670 - L1MEc LINE L1 -6201 195 38 443 328 66 6 chr10 471662 471845 -145117443 + MIR SINE MIR 48 241 -21 251 284 31 102 chr10 474151 474278 -145115010 + MER5A DNA MER1_type 9 126 -52 1948 130 0 11 chr10 474284 474554 -145114734 - AluSg SINE Alu -7 303 37 1735 156 43 0 chr10 474748 475030 -145114258 - AluSx SINE Alu -18 294 1 2718 36 3 0 chr10 475586 475892 -145113396 + AluY SINE Alu 1 307 -4 266 234 52 0 chr10 476249 476326 -145112962 + MER58C DNA MER1_type 117 197 -18 232 323 83 0 chr10 477326 477422 -145111866 - MIR SINE MIR -58 204 101 378 242 24 24 chr10 478534 478658 -145110630 + CT-rich Low_complexity Low_complexity 4 127 0 1723 170 0 3 chr10 480515 480798 -145108490 - AluJb SINE Alu -25 287 6 1807 154 7 36 chr10 483720 484026 -145105262 + AluSx SINE Alu 1 297 -15 203 114 23 0 chr10 484885 484929 -145104359 + T-rich Low_complexity Low_complexity 3 47 0 266 254 10 83 chr10 485799 485992 -145103296 + (CATA)n Simple_repeat Simple_repeat 1 179 0 288 287 25 32 chr10 486284 486441 -145102847 + (CATA)n Simple_repeat Simple_repeat 3 158 0 266 297 22 33 chr10 486507 486689 -145102599 + (CATA)n Simple_repeat Simple_repeat 1 180 0 329 253 28 55 chr10 486799 486981 -145102307 + (CATA)n Simple_repeat Simple_repeat 3 179 0 * 355 251 40 29 chr10 486860 487035 -145102253 + (CATATA)n Simple_repeat Simple_repeat 4 180 0 346 264 22 50 chr10 487157 487339 -145101949 + (CATATA)n Simple_repeat Simple_repeat 3 179 0 246 325 24 30 chr10 487280 487446 -145101842 + (TATG)n Simple_repeat Simple_repeat 1 165 0 * 300 314 23 29 chr10 487458 487633 -145101655 + (CATATA)n Simple_repeat Simple_repeat 4 177 0 208 307 12 49 chr10 487602 487765 -145101523 + (CATA)n Simple_repeat Simple_repeat 1 157 0 * 1392 156 59 103 chr10 488965 489305 -145099983 - MER1B DNA MER1_type 0 339 15 1209 183 0 9 chr10 489479 489698 -145099590 + AluJo SINE Alu 89 305 -7 230 143 0 36 chr10 492751 492807 -145096481 - L1MA4 LINE L1 -295 6005 5952 235 321 36 0 chr10 494385 494469 -145094819 + MIR SINE MIR 86 172 -90 210 325 37 0 chr10 495199 495362 -145093926 + (CCCCAG)n Simple_repeat Simple_repeat 3 171 0 1079 296 83 33 chr10 495905 496698 -145092590 - L1ME LINE L1 -465 5699 4863 2261 101 0 10 chr10 498211 498517 -145090771 - AluSx SINE Alu -9 303 1 307 273 84 56 chr10 499497 499640 -145089648 + L1ME2 LINE L1 5731 5877 -289 270 111 44 0 chr10 500168 500213 -145089075 + Alu SINE Alu 1 47 -254 199 271 9 75 chr10 500585 500692 -145088596 + L2 LINE L2 2994 3093 -179 240 319 129 0 chr10 500863 500979 -145088309 + L2 LINE L2 3133 3263 -9 337 228 13 0 chr10 502403 502482 -145086806 - MER116 DNA Mariner 0 80 1 666 234 119 23 chr10 502712 502930 -145086358 + MER8 DNA MER2_type 1 239 0 2180 107 47 0 chr10 503320 503618 -145085670 + AluSq SINE Alu 2 313 0 667 284 147 29 chr10 504039 504489 -145084799 + MLT2B2 LTR ERVL 9 511 -4 224 267 0 0 chr10 505633 505693 -145083595 + C-rich Low_complexity Low_complexity 2 61 0 971 258 192 2 chr10 508795 509249 -145080039 - MER92B LTR ERV1 -96 540 1 769 232 135 12 chr10 509483 509742 -145079546 + MLT1A1 LTR MaLR 2 292 -73 958 110 0 7 chr10 510286 510422 -145078866 + AluSg/x SINE Alu 175 309 -1 282 197 159 114 chr10 510810 510942 -145078346 - MLT1E2 LTR MaLR 0 626 489 306 262 63 0 chr10 510970 511096 -145078192 + (CCCCAG)n Simple_repeat Simple_repeat 4 137 0 757 183 0 7 chr10 511600 511737 -145077551 + AluSg/x SINE Alu 177 312 0 282 197 159 114 chr10 512130 512262 -145077026 - MLT1E2 LTR MaLR 0 626 489 377 262 49 12 chr10 512290 512454 -145076834 + (CCCCAG)n Simple_repeat Simple_repeat 4 173 0 560 234 36 12 chr10 512460 512627 -145076661 - MLT1D LTR MaLR -263 242 72 394 216 0 34 chr10 515930 516018 -145073270 - Tigger5 DNA MER2_type -3 2320 2236 243 260 41 27 chr10 516076 516149 -145073139 - Tigger5 DNA MER2_type -2249 74 1 390 165 15 8 chr10 516513 516646 -145072642 + (CA)n Simple_repeat Simple_repeat 2 135 0 1724 253 88 9 chr10 517939 518505 -145070783 + L1MA4 LINE L1 5690 6300 0 681 112 9 0 chr10 518559 518666 -145070622 + MSTA LTR MaLR 2 109 -319 359 70 18 0 chr10 518670 518727 -145070561 + MSTA LTR MaLR 52 109 -319 359 70 18 0 chr10 518731 518788 -145070500 + MSTA LTR MaLR 52 109 -319 359 103 20 13 chr10 518779 518856 -145070432 + MSTA LTR MaLR 45 119 -256 301 123 18 0 chr10 518853 518910 -145070378 + MSTA LTR MaLR 52 109 -319 * 322 98 0 0 chr10 518914 518965 -145070323 + MSTA LTR MaLR 52 102 -326 1609 138 163 9 chr10 518967 519292 -145069996 + MSTA LTR MaLR 45 419 -9 1964 105 17 3 chr10 519929 520223 -145069065 + AluSx SINE Alu 1 298 -14 204 135 27 0 chr10 523525 523562 -145065726 + (CA)n Simple_repeat Simple_repeat 1 38 0 240 329 0 0 chr10 525269 525339 -145063949 + MIR SINE MIR 118 187 -75 792 237 103 9 chr10 527142 527366 -145061922 - MLT1D LTR MaLR -5 500 256 645 137 20 26 chr10 530175 530328 -145058960 + GA-rich Low_complexity Low_complexity 1 152 0 200 246 35 0 chr10 530482 530539 -145058749 + (CTATT)n Simple_repeat Simple_repeat 1 59 0 210 367 0 0 chr10 532380 532557 -145056731 + (CTGGGG)n Simple_repeat Simple_repeat 4 180 0 266 180 16 0 chr10 533106 533167 -145056121 + (CA)n Simple_repeat Simple_repeat 1 62 0 394 273 48 12 chr10 533200 533365 -145055923 + (CATA)n Simple_repeat Simple_repeat 2 172 0 295 214 14 28 chr10 533401 533546 -145055742 + (CATA)n Simple_repeat Simple_repeat 4 146 0 187 354 152 15 chr10 537328 537526 -145051762 + L3b LINE CR1 1109 1333 -250 182 211 26 0 chr10 537563 537601 -145051687 + L3b LINE CR1 1422 1460 -123 216 324 29 0 chr10 538649 538717 -145050571 - L2 LINE L2 -8 3264 3195 247 265 0 33 chr10 539300 539581 -145049707 + GA-rich Low_complexity Low_complexity 1 271 0 266 316 105 7 chr10 543870 544022 -145045266 - MIR SINE MIR -45 217 51 594 234 60 43 chr10 544093 544277 -145045011 + LTR55 LTR ERV 1 187 -361 240 167 179 12 chr10 544663 544747 -145044541 - MER20 DNA MER1_type -55 164 67 234 343 0 0 chr10 545875 545948 -145043340 + MIR3 SINE MIR 124 196 -12 29 28 0 0 chr10 547039 547075 -145042213 + AT_rich Low_complexity Low_complexity 1 36 0 1395 127 5 5 chr10 550409 550621 -145038667 + AluSq SINE Alu 102 313 0 291 307 24 8 chr10 552136 552263 -145037025 - L1MC4 LINE L1 0 8042 7914 283 250 0 42 chr10 553019 553091 -145036197 - MLT1A1 LTR MaLR 0 365 297 294 236 0 42 chr10 553098 553170 -145036118 - MLT1A1 LTR MaLR 0 365 297 1668 188 47 9 chr10 553177 553517 -145035771 - MLT1A1 LTR MaLR 0 365 13 192 305 105 11 chr10 555557 555652 -145033636 - MIR SINE MIR -91 171 68 431 345 0 0 chr10 556418 556595 -145032693 + G-rich Low_complexity Low_complexity 2 178 0 1554 142 38 11 chr10 557619 557886 -145031402 + AluJo SINE Alu 33 306 -6 276 254 82 45 chr10 558077 558211 -145031077 - MER5A DNA MER1_type 0 189 51 1934 107 7 52 chr10 558761 559070 -145030218 + AluSx SINE Alu 1 295 -17 2302 78 3 3 chr10 559072 559378 -145029910 + AluY SINE Alu 1 306 -5 351 310 0 26 chr10 560933 561046 -145028242 + HAL1b LINE L1 376 485 -863 891 238 36 0 chr10 567719 567942 -145021346 + MER8 DNA MER2_type 9 239 0 2242 122 3 3 chr10 569005 569317 -145019971 + AluSx SINE Alu 1 312 0 245 215 11 0 chr10 570691 570784 -145018504 + (CTATA)n Simple_repeat Simple_repeat 1 94 0 729 146 132 6 chr10 570796 571001 -145018287 + MER61D LTR ERV1 1 218 -216 756 119 9 0 chr10 571115 571224 -145018064 - AluSq/x SINE Alu -200 112 3 216 0 0 0 chr10 573187 573211 -145016077 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 190 211 26 0 chr10 574840 574878 -145014410 - L3b LINE CR1 -123 1460 1422 189 349 152 15 chr10 574915 575113 -145014175 - L3b LINE CR1 -250 1333 1109 295 214 14 28 chr10 578895 579040 -145010248 + (TATG)n Simple_repeat Simple_repeat 4 146 0 394 273 48 12 chr10 579076 579241 -145010047 + (TATG)n Simple_repeat Simple_repeat 2 172 0 266 180 16 0 chr10 579274 579335 -145009953 + (TG)n Simple_repeat Simple_repeat 1 62 0 210 367 0 0 chr10 579884 580061 -145009227 + (CCCCAG)n Simple_repeat Simple_repeat 4 180 0 200 112 0 155 chr10 580772 580933 -145008355 + (CAGGT)n Simple_repeat Simple_repeat 1 136 0 3547 162 10 13 chr10 581089 581805 -145007483 + L1 LINE L1 3752 4465 -1681 1945 148 21 0 chr10 581816 582148 -145007140 + L1MA5 LINE L1 5960 6298 -2 645 214 20 70 chr10 583676 583877 -145005411 - MLT1J LTR MaLR -82 429 239 290 228 219 44 chr10 583904 584018 -145005270 - MER5A DNA MER1_type -7 182 49 240 299 13 13 chr10 584035 584112 -145005176 - MLT1J LTR MaLR -298 213 137 255 232 85 6 chr10 584275 584439 -145004849 + (CA)n Simple_repeat Simple_repeat 2 178 0 368 201 88 0 chr10 584480 584639 -145004649 + (CA)n Simple_repeat Simple_repeat 2 174 0 299 186 32 85 chr10 584550 584738 -145004550 + (CACAA)n Simple_repeat Simple_repeat 2 179 0 * 368 355 0 0 chr10 586137 586244 -145003044 + (CA)n Simple_repeat Simple_repeat 1 107 0 543 276 0 0 chr10 586269 586439 -145002849 + (CA)n Simple_repeat Simple_repeat 1 170 0 242 296 82 10 chr10 587569 587667 -145001621 - MIR SINE MIR -65 197 93 24 0 0 0 chr10 590278 590302 -144998986 + AT_rich Low_complexity Low_complexity 1 24 0 2511 80 0 3 chr10 592456 592767 -144996521 + AluSq SINE Alu 1 310 -3 402 21 0 0 chr10 592767 592814 -144996474 + (TA)n Simple_repeat Simple_repeat 2 48 0 180 0 0 0 chr10 593258 593278 -144996010 + (TAA)n Simple_repeat Simple_repeat 2 21 0 2081 131 10 0 chr10 593287 593584 -144995704 + AluSx SINE Alu 3 302 -10 2292 99 0 7 chr10 597664 597956 -144991332 + AluSg SINE Alu 1 290 -20 303 28 0 0 chr10 597956 597992 -144991296 + (TA)n Simple_repeat Simple_repeat 2 37 0 2287 109 0 3 chr10 604199 604503 -144984785 - AluSx SINE Alu -9 303 1 264 54 0 27 chr10 604544 604581 -144984707 + U6 snRNA snRNA 1 36 -71 1355 219 61 48 chr10 604590 604657 -144984631 - MLT1C LTR MaLR 0 467 402 1409 174 77 43 chr10 604657 604956 -144984332 + AluJo SINE Alu 1 309 -3 1355 219 61 48 chr10 604956 605349 -144983939 - MLT1C LTR MaLR -65 402 1 234 247 26 13 chr10 606135 606289 -144982999 + (TG)n Simple_repeat Simple_repeat 1 156 0 317 269 150 57 chr10 606509 606702 -144982586 + HAL1 LINE L1 1912 2122 -385 413 248 113 28 chr10 606710 606851 -144982437 - L1ME LINE L1 -4142 2254 2102 1264 292 112 45 chr10 606866 607916 -144981372 - L1ME LINE L1 -4452 1944 765 4210 126 31 19 chr10 607916 608085 -144981203 - L1MA3 LINE L1 0 6305 6140 2297 103 3 3 chr10 608085 608385 -144980903 - AluSq SINE Alu -9 304 5 4210 126 31 19 chr10 608385 608945 -144980343 - L1MA3 LINE L1 -165 6140 5567 1264 292 112 45 chr10 608945 609052 -144980236 - L1ME LINE L1 -5631 765 667 316 309 78 78 chr10 609389 609619 -144979669 - L1ME LINE L1 -5992 404 175 2115 155 0 0 chr10 609654 609964 -144979324 - AluSg SINE Alu 0 310 1 429 210 89 85 chr10 610168 610429 -144978859 + HAL1 LINE L1 1860 2243 -264 980 120 0 0 chr10 610429 610562 -144978726 + FLAM_C SINE Alu 1 133 0 429 210 89 85 chr10 610562 610666 -144978622 + HAL1 LINE L1 2243 2345 -162 2556 84 0 0 chr10 610669 610979 -144978309 + AluY SINE Alu 1 310 -1 303 254 25 82 chr10 611273 611395 -144977893 - L1ME3 LINE L1 -83 6062 5948 394 215 91 59 chr10 611443 611677 -144977611 - L1ME2 LINE L1 -214 5939 5682 709 268 59 74 chr10 611796 612456 -144976832 - L1ME2 LINE L1 -1317 4812 4163 * 3693 229 121 15 chr10 612455 613483 -144975805 - MSTD-int LTR MaLR -597 1138 2 629 114 5 0 chr10 613493 613597 -144975691 - ALR/Alpha Satellite centromeric -20 151 47 1603 149 221 0 chr10 613597 613905 -144975383 - MSTD LTR MaLR -20 376 1 224 196 0 39 chr10 614107 614158 -144975130 + A-rich Low_complexity Low_complexity 2 50 0 1161 280 82 65 chr10 614316 614638 -144974650 - L1ME2 LINE L1 -2369 3760 3445 954 73 0 22 chr10 614638 614774 -144974514 - L1PA4 LINE L1 0 6155 6023 1161 280 82 65 chr10 614774 615890 -144973398 - L1ME2 LINE L1 -2684 3445 2297 492 281 53 115 chr10 615903 616048 -144973240 - L1ME2 LINE L1 -5073 1046 894 1488 186 0 11 chr10 616048 616312 -144972976 - AluJo SINE Alu -51 261 1 492 281 53 115 chr10 616312 616610 -144972678 - L1ME2 LINE L1 -5225 894 602 239 296 68 68 chr10 616692 616868 -144972420 - L1ME2 LINE L1 -5499 620 445 1301 159 4 35 chr10 617246 617393 -144971895 + AluJb SINE Alu 1 140 -172 2581 100 22 14 chr10 617393 617754 -144971534 + THE1B LTR MaLR 1 364 0 1301 159 4 35 chr10 617754 617838 -144971450 + AluJb SINE Alu 140 225 -87 253 254 0 0 chr10 617838 617897 -144971391 + AluSp/q SINE Alu 178 236 -67 654 198 0 33 chr10 617931 618052 -144971236 + AluSg/x SINE Alu 175 291 -21 250 279 95 62 chr10 618410 618589 -144970699 - MIR3 SINE MIR -1 207 23 324 326 133 15 chr10 619039 619235 -144970053 - L1ME3A LINE L1 -28 6142 5924 864 127 0 0 chr10 619325 619451 -144969837 - FLAM_C SINE Alu -17 126 1 1218 300 54 35 chr10 619459 620318 -144968970 - L1ME3A LINE L1 -264 5906 5032 750 272 80 77 chr10 620345 620933 -144968355 + L1ME LINE L1 6 595 -5475 1568 316 71 60 chr10 621082 621142 -144968146 - L1ME3A LINE L1 -1123 5023 4965 2145 115 3 6 chr10 621142 621455 -144967833 - AluSx SINE Alu 0 312 1 1568 316 71 60 chr10 621455 622055 -144967233 - L1ME3A LINE L1 -1181 4965 4373 2034 124 0 0 chr10 622055 622346 -144966942 - AluSc SINE Alu -18 291 1 1568 316 71 60 chr10 622346 623125 -144966163 - L1ME3A LINE L1 -1773 4373 3567 2037 109 0 0 chr10 624988 625263 -144964025 + AluSx SINE Alu 1 275 -37 180 0 0 0 chr10 625266 625286 -144964002 + (TAA)n Simple_repeat Simple_repeat 2 21 0 23 0 0 0 chr10 626773 626796 -144962492 + AT_rich Low_complexity Low_complexity 1 23 0 456 248 43 0 chr10 627065 627182 -144962106 + L1 LINE L1 5113 5234 -912 * 2597 33 0 0 chr10 627182 627483 -144961805 - AluY SINE Alu -10 301 1 769 185 53 21 chr10 627483 627662 -144961626 + L1MA9 LINE L1 6125 6312 0 242 333 19 0 chr10 627831 627939 -144961349 - L1ME LINE L1 -382 5739 5630 387 316 44 7 chr10 628646 628782 -144960506 - L2 LINE L2 -1 3312 3172 323 283 20 30 chr10 629612 629711 -144959577 - L2 LINE L2 -1 3271 3174 1880 104 11 11 chr10 629980 630110 -144959178 + AluSq SINE Alu 4 133 -180 1991 138 13 0 chr10 630110 630415 -144958873 + AluSp SINE Alu 1 309 -4 1880 104 11 11 chr10 630415 630562 -144958726 + AluSq SINE Alu 132 281 -32 194 0 39 0 chr10 630562 630588 -144958700 + (TAAAA)n Simple_repeat Simple_repeat 5 31 0 235 351 0 47 chr10 632087 632258 -144957030 + (CCCA)n Simple_repeat Simple_repeat 3 165 0 360 307 0 45 chr10 632273 632449 -144956839 + (CCCA)n Simple_repeat Simple_repeat 3 170 0 1976 138 6 3 chr10 633605 633916 -144955372 + AluSx SINE Alu 1 312 0 372 295 35 0 chr10 634318 634491 -144954797 + (CCCTG)n Simple_repeat Simple_repeat 2 180 0 382 278 35 0 chr10 634577 634750 -144954538 + (CCCTG)n Simple_repeat Simple_repeat 2 180 0 223 347 13 0 chr10 634810 634885 -144954403 - MER91B DNA MER1_type -60 130 55 2386 75 0 0 chr10 635626 635931 -144953357 - AluSc SINE Alu -4 305 1 1872 179 7 0 chr10 636913 637221 -144952067 + AluJo SINE Alu 1 310 -2 3526 174 58 8 chr10 637231 637886 -144951402 + L1PA16 LINE L1 5476 6163 -3 324 294 14 21 chr10 638064 638207 -144951081 - HAL1b LINE L1 -1 1347 1206 335 180 20 47 chr10 638766 638916 -144950372 + CT-rich Low_complexity Low_complexity 3 148 0 272 221 9 0 chr10 639047 639160 -144950128 + (TG)n Simple_repeat Simple_repeat 1 114 0 4754 180 96 5 chr10 639276 640894 -144948394 + L1PB4 LINE L1 4369 6153 -3 2105 88 15 0 chr10 642853 643220 -144946068 - AluSx SINE Alu 0 375 5 258 241 37 0 chr10 643376 643430 -144945858 + MER5A DNA MER1_type 109 164 -25 238 236 42 14 chr10 644985 645057 -144944231 + LTR16C LTR ERVL 406 479 -12 238 229 43 14 chr10 645061 645131 -144944157 + LTR16C LTR ERVL 408 479 -12 251 257 40 0 chr10 645135 645209 -144944079 + LTR16C LTR ERVL 408 484 -7 779 224 52 5 chr10 648068 648260 -144941028 + L1MB3 LINE L1 5470 5670 -501 1574 184 14 20 chr10 648260 648411 -144940877 - AluJo SINE Alu -16 296 146 2740 95 16 0 chr10 648411 648780 -144940508 + THE1C LTR MaLR 1 375 0 1574 184 14 20 chr10 648780 648921 -144940367 - AluJo SINE Alu -166 146 6 1851 204 136 0 chr10 648921 649376 -144939912 + L1MB3 LINE L1 5657 6173 -10 853 181 6 6 chr10 652991 653151 -144936137 - AluJb SINE Alu -22 290 131 400 298 133 12 chr10 653720 653996 -144935292 + MLT1A2 LTR MaLR 5 322 -52 2407 75 0 3 chr10 654255 654562 -144934726 - AluSx SINE Alu -4 308 3 1287 140 229 0 chr10 657215 657451 -144931837 + AluJo SINE Alu 1 290 -12 322 317 0 0 chr10 658290 658683 -144930605 + (TG)n Simple_repeat Simple_repeat 1 393 0 1092 166 0 10 chr10 659227 659420 -144929868 + AluJb SINE Alu 116 306 -6 349 222 218 56 chr10 660096 660330 -144928958 + L1M4 LINE L1 4297 4568 -1578 494 264 88 0 chr10 660969 661117 -144928171 + L1M4 LINE L1 4552 4712 -1434 6510 138 36 12 chr10 661118 661805 -144927483 + L1P4 LINE L1 1190 1916 -4933 2100 181 89 26 chr10 661805 662264 -144927024 + LTR2B LTR ERV1 3 490 0 6510 138 36 12 chr10 662264 662703 -144926585 + L1P4 LINE L1 1916 2343 -4506 2572 116 6 3 chr10 662704 663067 -144926221 + THE1B LTR MaLR 1 364 0 5330 106 83 60 chr10 663067 663982 -144925306 + THE1B-int LTR MaLR 1 936 -644 4428 122 47 56 chr10 663951 664658 -144924630 - THE1B-int LTR MaLR -833 747 46 * 2008 120 3 20 chr10 664658 664959 -144924329 - AluSq SINE Alu -17 296 1 4428 122 47 56 chr10 664959 665004 -144924284 - THE1B-int LTR MaLR -1534 46 2 2492 107 19 25 chr10 665005 665370 -144923918 - THE1B LTR MaLR 0 364 2 5376 233 109 10 chr10 665378 665435 -144923853 + L1P4 LINE L1 2348 2398 -4451 405 0 0 0 chr10 665435 665480 -144923808 + (CA)n Simple_repeat Simple_repeat 2 46 0 5376 233 109 10 chr10 665480 667261 -144922027 + L1P4 LINE L1 2398 4371 -2478 4189 161 26 56 chr10 667259 667474 -144921814 + L1P4 LINE L1 5035 5255 -1614 * 2224 82 0 16 chr10 667474 667779 -144921509 - AluY SINE Alu -10 301 2 4189 161 26 56 chr10 667779 668742 -144920546 + L1P4 LINE L1 5255 6163 -706 1705 175 0 7 chr10 668742 669034 -144920254 - AluJo SINE Alu -22 290 1 4189 161 26 56 chr10 669034 669123 -144920165 + L1P4 LINE L1 6163 6253 -616 246 227 82 27 chr10 669490 669600 -144919688 + Charlie5 DNA MER1_type 2441 2556 -56 266 227 61 0 chr10 670746 670812 -144918476 + MER116 DNA Mariner 1 70 -10 192 216 0 0 chr10 671438 671475 -144917813 + L2 LINE L2 1877 1913 -1401 238 209 166 72 chr10 672921 673060 -144916228 + MLT1L LTR MaLR 41 192 -423 401 311 77 23 chr10 673590 673877 -144915411 + L1MEc LINE L1 2219 2525 -3690 343 293 38 9 chr10 674970 675076 -144914212 - L2 LINE L2 -10 3262 3154 474 189 0 0 chr10 675721 675832 -144913456 + GA-rich Low_complexity Low_complexity 3 113 0 367 266 127 11 chr10 676635 676902 -144912386 + L1M4 LINE L1 5062 5359 -787 21 0 0 0 chr10 677352 677373 -144911915 + AT_rich Low_complexity Low_complexity 1 21 0 26 50 0 0 chr10 679633 679673 -144909615 + AT_rich Low_complexity Low_complexity 1 40 0 23 0 0 0 chr10 680833 680856 -144908432 + GC_rich Low_complexity Low_complexity 1 23 0 2053 114 0 7 chr10 681643 681942 -144907346 - AluSc SINE Alu -12 297 1 191 59 0 29 chr10 681946 681980 -144907308 + (TTA)n Simple_repeat Simple_repeat 1 33 0 288 272 41 20 chr10 683378 683528 -144905760 - MIR SINE MIR -57 151 17 2073 119 0 0 chr10 683788 684081 -144905207 + AluSx SINE Alu 1 293 -19 24 0 0 0 chr10 686302 686326 -144902962 + AT_rich Low_complexity Low_complexity 1 24 0 185 271 21 0 chr10 689491 689539 -144899749 - MIR3 SINE MIR -27 181 133 507 293 55 6 chr10 689577 689741 -144899547 + ERVL LTR ERVL 3223 3394 -2370 306 288 159 6 chr10 691288 691458 -144897830 + LTR50 LTR ERVL 14 209 -586 1643 183 0 0 chr10 692051 692366 -144896922 + AluJo SINE Alu 1 315 0 26 0 0 0 chr10 692842 692868 -144896420 + AT_rich Low_complexity Low_complexity 1 26 0 2226 71 0 7 chr10 694833 695130 -144894158 + AluY SINE Alu 1 295 -16 189 0 0 0 chr10 699117 699138 -144890150 + (T)n Simple_repeat Simple_repeat 1 21 0 355 247 113 20 chr10 699168 699318 -144889970 + L1ME1 LINE L1 36 199 -6197 1621 208 124 47 chr10 699390 699872 -144889416 + L1ME1 LINE L1 469 1007 -5389 2487 58 0 0 chr10 699872 700183 -144889105 - AluY SINE Alu 0 311 1 1621 208 124 47 chr10 700183 700297 -144888991 + L1ME1 LINE L1 1007 1111 -5285 1263 247 138 23 chr10 700365 700892 -144888396 + L1ME1 LINE L1 1392 1979 -4417 1388 104 0 45 chr10 700986 701208 -144888080 + MER30 DNA MER1_type 2 213 -17 1241 198 87 43 chr10 701218 701450 -144887838 + L1ME1 LINE L1 2057 2277 -4119 2169 105 3 0 chr10 701450 701754 -144887534 + AluSc SINE Alu 1 305 -4 1241 198 87 43 chr10 701754 701960 -144887328 + L1ME1 LINE L1 2277 2514 -3882 401 21 0 0 chr10 702710 702757 -144886531 + AluSg SINE Alu 2 48 -262 1074 72 0 0 chr10 702757 702895 -144886393 + AluSg/x SINE Alu 160 297 -15 1793 108 0 0 chr10 703539 703789 -144885499 + AluSg SINE Alu 47 296 -14 28 61 0 0 chr10 703959 704008 -144885280 + AT_rich Low_complexity Low_complexity 1 49 0 414 292 60 0 chr10 704892 705060 -144884228 + L1ME1 LINE L1 3337 3514 -2701 940 292 73 10 chr10 705099 705507 -144883781 + L1ME1 LINE L1 4492 4925 -1290 691 258 55 19 chr10 705553 705824 -144883464 + L1ME1 LINE L1 5026 5306 -909 6106 181 34 6 chr10 705875 707276 -144882012 + L1MC1 LINE L1 4885 6328 -5 2215 235 110 31 chr10 707287 708097 -144881191 + L1ME1 LINE L1 5355 6228 -7 24 32 0 0 chr10 708304 708335 -144880953 + AT_rich Low_complexity Low_complexity 1 31 0 1818 152 3 7 chr10 708709 709005 -144880283 + AluSx SINE Alu 1 295 -17 1963 132 3 3 chr10 710039 710335 -144878953 - AluSc SINE Alu -13 296 1 2234 105 0 0 chr10 711256 711561 -144877727 + AluSq SINE Alu 1 305 -8 457 303 114 56 chr10 714019 714432 -144874856 - L2 LINE L2 -9 3263 2827 367 296 151 29 chr10 714639 714946 -144874342 - L2 LINE L2 -1152 2162 1807 588 299 91 48 chr10 715210 715357 -144873931 + L1MC1 LINE L1 40 179 -6217 2294 80 0 39 chr10 715357 715668 -144873620 - AluSg SINE Alu -11 299 1 588 299 91 48 chr10 715668 716039 -144873249 + L1MC1 LINE L1 179 580 -5816 1655 255 103 7 chr10 716041 716625 -144872663 + L1MC1 LINE L1 607 1246 -5150 556 332 40 12 chr10 716662 716984 -144872304 + L1MC1 LINE L1 1760 2090 -4306 1472 175 183 99 chr10 717056 717424 -144871864 + L1MD3 LINE L1 6701 7036 -959 254 253 0 13 chr10 717424 717499 -144871789 + MLT1F1 LTR MaLR 52 125 -442 1472 175 183 99 chr10 717499 718022 -144871266 + L1MD3 LINE L1 7036 7983 -12 6256 253 108 30 chr10 718026 719020 -144870268 + L1MC1 LINE L1 2179 3094 -3121 2213 114 0 0 chr10 719020 719319 -144869969 - AluSx SINE Alu -9 303 5 6256 253 108 30 chr10 719319 719626 -144869662 + L1MC1 LINE L1 3094 3376 -2839 1731 164 4 4 chr10 719626 719901 -144869387 + AluJb SINE Alu 5 279 -33 6256 253 108 30 chr10 719901 721035 -144868253 + L1MC1 LINE L1 3376 4853 -1362 14068 145 49 15 chr10 721035 721241 -144868047 - Tigger1 DNA MER2_type 0 2418 2220 1999 158 0 0 chr10 721241 721544 -144867744 + AluSx SINE Alu 1 303 -9 14068 145 49 15 chr10 721544 723673 -144865615 - Tigger1 DNA MER2_type -198 2220 4 6256 253 108 30 chr10 723673 723960 -144865328 + L1MC1 LINE L1 4853 5116 -1099 230 239 147 0 chr10 724076 724185 -144865103 + L1MC1 LINE L1 5323 5447 -2407 4849 195 49 12 chr10 724195 725247 -144864041 + L1MCa LINE L1 30 1120 -5306 338 85 0 0 chr10 725265 725312 -144863976 + MER39B LTR ERV1 1 47 -606 1163 133 133 18 chr10 725324 725550 -144863738 + LTR49-int LTR ERV1 375 626 -5705 * 1542 167 141 95 chr10 725548 726032 -144863256 + LTR49-int LTR ERV1 751 1256 -5075 2167 216 62 4 chr10 726034 726709 -144862579 + L1M3 LINE L1 4788 5491 -692 979 118 0 0 chr10 726709 726844 -144862444 + AluSq/x SINE Alu 1 135 -177 2047 118 28 0 chr10 726844 727131 -144862157 + AluSg SINE Alu 1 295 -15 944 141 0 25 chr10 727132 727295 -144861993 + L1M3 LINE L1 5483 5641 -542 4867 152 6 17 chr10 727295 728064 -144861224 + L1MC1 LINE L1 5632 6402 0 1689 234 58 29 chr10 728065 728581 -144860707 + L1ME2 LINE L1 5390 5920 -244 233 200 83 0 chr10 728581 728641 -144860647 + FRAM/FAM SINE Alu 15 79 -87 2360 82 0 0 chr10 728714 729008 -144860280 + AluY SINE Alu 1 294 -17 225 0 0 0 chr10 730096 730121 -144859167 + (A)n Simple_repeat Simple_repeat 1 25 0 2018 97 8 0 chr10 730357 730624 -144858664 + AluY SINE Alu 40 308 -3 2430 43 3 23 chr10 731066 731368 -144857920 - AluY SINE Alu -15 296 1 21 0 0 0 chr10 731516 731537 -144857751 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 732257 732278 -144857010 + AT_rich Low_complexity Low_complexity 1 21 0 2208 103 7 0 chr10 732511 732813 -144856475 + AluSx SINE Alu 1 304 -8 304 307 82 39 chr10 733214 733445 -144855843 + L2 LINE L2 2718 2958 -356 191 327 36 36 chr10 734747 734857 -144854431 + L2 LINE L2 3204 3313 0 21 36 0 0 chr10 734858 734886 -144854402 + AT_rich Low_complexity Low_complexity 1 28 0 343 303 127 0 chr10 735073 735215 -144854073 - MIR SINE MIR -11 251 92 2252 123 0 3 chr10 735418 735726 -144853562 + AluSx SINE Alu 1 307 -5 21 0 0 0 chr10 736216 736237 -144853051 + AT_rich Low_complexity Low_complexity 1 21 0 1787 118 30 61 chr10 737445 737791 -144851497 + AluSx SINE Alu 1 337 0 270 326 11 0 chr10 741635 741727 -144847561 + L1MC4 LINE L1 7826 7918 -124 2131 98 0 11 chr10 741789 742099 -144847189 + AluSx SINE Alu 1 307 0 279 268 103 0 chr10 742767 742864 -144846424 - MIR SINE MIR -57 205 99 543 271 68 23 chr10 743003 743180 -144846108 + MIR SINE MIR 10 194 -68 666 180 34 4 chr10 743376 743525 -144845763 - MSTC LTR MaLR -9 419 271 651 186 6 51 chr10 743532 743688 -144845600 - MSTC LTR MaLR -247 149 1 3640 212 48 60 chr10 743699 743943 -144845345 - MSTC-int LTR MaLR -13 1722 1476 2165 112 10 7 chr10 743943 744248 -144845040 + AluSp SINE Alu 1 306 -7 3640 212 48 60 chr10 744248 745027 -144844261 - MSTC-int LTR MaLR -259 1476 712 1051 186 0 0 chr10 745074 745235 -144844053 + FRAM SINE Alu 1 161 -5 803 164 21 21 chr10 745344 745484 -144843804 + MIR SINE MIR 22 161 -101 590 250 202 27 chr10 745609 746194 -144843094 - L2 LINE L2 -15 3298 2601 357 276 19 0 chr10 746388 746493 -144842795 + L1ME3A LINE L1 6048 6154 -16 1609 148 114 4 chr10 747336 747607 -144841681 - AluJb SINE Alu -1 301 1 2527 73 0 0 chr10 747612 747913 -144841375 - AluSq SINE Alu -12 301 1 1978 125 10 14 chr10 748306 748602 -144840686 + AluSx SINE Alu 1 295 -17 241 140 88 35 chr10 748675 748732 -144840556 - L1 LINE L1 -3326 2820 2761 617 197 21 14 chr10 750016 750158 -144839130 + L1MB8 LINE L1 6027 6169 -9 1783 94 0 0 chr10 750292 750516 -144838772 - AluY SINE Alu -15 296 73 2211 103 6 6 chr10 751133 751444 -144837844 + AluSp SINE Alu 3 313 0 39 22 0 0 chr10 751463 751509 -144837779 + AT_rich Low_complexity Low_complexity 1 46 0 928 118 0 37 chr10 751553 751689 -144837599 + FLAM_C SINE Alu 1 131 -2 32 43 0 0 chr10 751763 751809 -144837479 + AT_rich Low_complexity Low_complexity 1 46 0 21 57 0 0 chr10 752067 752102 -144837186 + AT_rich Low_complexity Low_complexity 1 35 0 1487 207 119 14 chr10 752979 753409 -144835879 + MER39 LTR ERV1 232 706 -1 22 0 0 0 chr10 753711 753733 -144835555 + AT_rich Low_complexity Low_complexity 1 22 0 4702 166 48 45 chr10 753975 754018 -144835270 + L1MA9 LINE L1 5254 5295 -1017 198 0 0 0 chr10 754018 754040 -144835248 + (TAAA)n Simple_repeat Simple_repeat 2 23 0 4702 166 48 45 chr10 754040 754710 -144834578 + L1MA9 LINE L1 5295 5961 -351 1990 122 11 0 chr10 754710 754988 -144834300 + AluSp SINE Alu 2 282 -31 183 42 0 0 chr10 754988 755012 -144834276 + (CA)n Simple_repeat Simple_repeat 1 24 0 4702 166 48 45 chr10 755012 755315 -144833973 + L1MA9 LINE L1 5960 6275 -37 1983 148 6 3 chr10 755329 755640 -144833648 + AluSx SINE Alu 1 312 0 1930 131 7 7 chr10 755643 755934 -144833354 + AluSx SINE Alu 1 291 -21 2058 133 7 7 chr10 755939 756247 -144833041 + AluSx SINE Alu 1 308 -4 3883 145 63 40 chr10 756377 756660 -144832628 - MER6 DNA MER2_type -75 790 515 1817 171 7 0 chr10 756660 756969 -144832319 + AluJb SINE Alu 1 311 -1 3883 145 63 40 chr10 756969 757450 -144831838 - MER6 DNA MER2_type -350 515 9 1715 109 40 8 chr10 757553 757801 -144831487 + AluSx SINE Alu 31 286 -26 183 42 0 0 chr10 758565 758589 -144830699 + (TTA)n Simple_repeat Simple_repeat 1 24 0 608 238 241 52 chr10 758949 759521 -144829767 + L1MC5 LINE L1 7246 7925 -36 2526 55 0 0 chr10 760567 760860 -144828428 - AluY SINE Alu -17 294 2 1975 131 10 29 chr10 760925 761239 -144828049 - AluSx SINE Alu -4 308 1 694 276 43 0 chr10 761500 761710 -144827578 - L1MD3 LINE L1 -170 7825 7607 580 239 81 125 chr10 762250 762916 -144826372 + L1MC5 LINE L1 7273 7909 -52 1963 119 3 7 chr10 762926 763262 -144826026 + AluSx SINE Alu 1 335 0 1410 142 123 26 chr10 763453 763721 -144825567 + AluSx SINE Alu 14 307 -5 23 33 0 0 chr10 763817 763847 -144825441 + AT_rich Low_complexity Low_complexity 1 30 0 21 36 0 0 chr10 763935 763963 -144825325 + AT_rich Low_complexity Low_complexity 1 28 0 608 258 7 20 chr10 764191 764342 -144824946 + Charlie1 DNA MER1_type 2 150 -2611 * 1546 187 68 64 chr10 764326 764813 -144824475 + Charlie1 DNA MER1_type 2272 2760 -1 3526 204 18 63 chr10 764889 765729 -144823559 + L1ME LINE L1 4499 5250 -914 2359 117 0 0 chr10 765729 766038 -144823250 + AluSx SINE Alu 1 309 -3 3526 204 18 63 chr10 766038 766514 -144822774 + L1ME LINE L1 5250 5746 -418 199 321 199 0 chr10 766745 766876 -144822412 - MIR SINE MIR -34 228 72 490 103 15 0 chr10 768088 768156 -144821132 + AluS SINE Alu 2 70 -242 1205 84 0 0 chr10 768305 768447 -144820841 - AluSq/x SINE Alu -171 142 1 26 50 0 0 chr10 768458 768498 -144820790 + AT_rich Low_complexity Low_complexity 1 40 0 1033 203 0 0 chr10 769948 770130 -144819158 + AluJb SINE Alu 130 311 -1 2325 118 0 0 chr10 770302 770606 -144818682 + AluSx SINE Alu 1 304 -8 372 214 309 0 chr10 770606 770774 -144818514 - MLT1F1 LTR MaLR -159 408 189 335 228 43 54 chr10 771372 771464 -144817824 + L1ME LINE L1 5353 5443 -678 991 149 0 0 chr10 771628 771816 -144817472 + FRAM SINE Alu 1 40 0 2207 76 7 28 chr10 771928 772241 -144817047 + AluSq SINE Alu 1 307 0 352 143 0 0 chr10 773039 773095 -144816193 + AluSq/x SINE Alu 80 135 -167 2245 106 0 29 chr10 773095 773234 -144816054 + AluSx SINE Alu 1 142 -170 2595 63 3 0 chr10 773234 773536 -144815752 + AluSp SINE Alu 3 305 -8 2245 106 0 29 chr10 773536 773707 -144815581 + AluSx SINE Alu 142 302 -10 232 247 0 14 chr10 774613 774686 -144814602 - L1MC5 LINE L1 -184 7777 7706 1783 244 86 56 chr10 774826 774968 -144814320 - L1MC4 LINE L1 -117 7925 7789 2509 65 0 10 chr10 774968 775277 -144814011 + AluY SINE Alu 1 306 -5 1783 244 86 56 chr10 775277 775339 -144813949 - L1MC4 LINE L1 -253 7789 7730 2131 105 3 7 chr10 775339 775661 -144813627 + AluSx SINE Alu 3 312 0 1783 244 86 56 chr10 775661 776180 -144813108 - L1MC4 LINE L1 -312 7730 7166 2273 126 0 0 chr10 776180 776482 -144812806 + AluJb SINE Alu 1 302 -10 1783 244 86 56 chr10 776482 776662 -144812626 - L1MC4 LINE L1 -876 7166 6993 2055 121 3 16 chr10 776780 777085 -144812203 - AluSq SINE Alu -12 301 1 226 259 71 24 chr10 777295 777380 -144811908 + L2 LINE L2 3222 3310 -3 1920 99 19 83 chr10 777497 777810 -144811478 + AluSx SINE Alu 20 312 0 1817 161 34 10 chr10 779006 779304 -144809984 - AluJb SINE Alu -3 309 5 241 186 36 0 chr10 779542 779612 -144809676 - L1M3 LINE L1 -587 5593 5522 1145 187 22 85 chr10 779613 779902 -144809386 - L1MC/D LINE L1 -659 5583 5357 1504 161 120 0 chr10 779902 780169 -144809119 - AluJb SINE Alu -13 299 1 1145 187 22 85 chr10 780169 780516 -144808772 - L1MC/D LINE L1 -885 5357 4990 * 1680 250 37 50 chr10 780499 781358 -144807930 - L1MC/D LINE L1 -1397 4749 3951 2217 90 14 3 chr10 781360 781649 -144807639 + AluSx SINE Alu 1 292 -20 207 321 25 12 chr10 781963 782044 -144807244 + MIR3 SINE MIR 78 159 -49 2058 145 3 3 chr10 782215 782511 -144806777 - AluSx SINE Alu -16 296 1 2457 78 3 7 chr10 782957 783264 -144806024 - AluSp SINE Alu -7 306 1 2314 229 77 13 chr10 783547 783634 -144805654 - L1MD1 LINE L1 0 6242 6162 1855 106 4 4 chr10 783634 783888 -144805400 - AluSq SINE Alu -59 254 1 2314 229 77 13 chr10 783888 784478 -144804810 - L1MD1 LINE L1 -80 6162 5522 256 179 34 0 chr10 784534 784602 -144804686 - L1M3 LINE L1 -587 5593 5524 256 179 34 0 chr10 784599 784667 -144804621 - L1M3 LINE L1 -587 5593 5524 * 289 142 35 0 chr10 784664 784732 -144804556 - L1M3 LINE L1 -587 5593 5524 * 313 151 37 0 chr10 784729 784798 -144804490 - L1M3 LINE L1 -659 5583 5523 2409 46 23 29 chr10 787586 787892 -144801396 - AluY SINE Alu -7 304 1 2192 134 0 13 chr10 788397 788711 -144800577 - AluSx SINE Alu -2 310 1 22 0 0 0 chr10 788915 788937 -144800351 + AT_rich Low_complexity Low_complexity 1 22 0 1885 164 13 0 chr10 789037 789342 -144799946 - AluJb SINE Alu -3 309 1 432 324 0 22 chr10 790627 790809 -144798479 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 365 343 0 17 chr10 790827 791008 -144798280 + (CCCA)n Simple_repeat Simple_repeat 1 178 0 350 210 28 39 chr10 791002 791183 -144798105 + CT-rich Low_complexity Low_complexity 2 180 0 * 1781 170 6 20 chr10 791282 791635 -144797653 + L1MC1 LINE L1 5798 6145 -188 2361 109 6 10 chr10 791671 791982 -144797306 + AluSx SINE Alu 2 311 -1 493 235 143 21 chr10 792073 792311 -144796977 + L1MCa LINE L1 31 297 -6129 650 85 21 0 chr10 792361 792455 -144796833 + L1MCa LINE L1 1780 1875 -4551 1053 89 19 0 chr10 792478 792635 -144796653 - MSTB1 LTR MaLR 0 432 273 276 127 36 0 chr10 792634 792689 -144796599 - MSTB1 LTR MaLR -103 329 273 * 261 143 36 0 chr10 792687 792743 -144796545 - MSTB1 LTR MaLR -102 330 273 * 294 107 36 0 chr10 792741 792797 -144796491 - MSTB1 LTR MaLR -102 330 273 241 132 38 0 chr10 792797 792850 -144796438 - MSTB1 LTR MaLR -104 328 274 1630 173 35 0 chr10 792850 793168 -144796120 - MSTB1 LTR MaLR -103 329 1 889 182 53 53 chr10 793173 793255 -144796033 - MLT1B LTR MaLR -163 227 146 2340 105 0 13 chr10 793255 793568 -144795720 + AluSp SINE Alu 1 309 -4 889 182 53 53 chr10 793568 793710 -144795578 - MLT1B LTR MaLR -243 147 3 196 288 17 0 chr10 793710 793769 -144795519 - L2 LINE L2 -1041 2273 2214 814 256 154 50 chr10 793783 794303 -144794985 + MLT1E1 LTR MaLR 69 642 -12 995 201 247 25 chr10 794898 795222 -144794066 - MSTD LTR MaLR 0 396 1 2329 98 0 0 chr10 795319 795616 -144793672 - AluSg SINE Alu -13 297 1 275 85 21 0 chr10 797293 797340 -144791948 + (TG)n Simple_repeat Simple_repeat 1 48 0 1997 161 0 3 chr10 797424 797729 -144791559 + AluJo SINE Alu 1 304 -8 1039 276 87 38 chr10 798165 798752 -144790536 + HAL1 LINE L1 574 1189 -1318 1885 88 0 4 chr10 799015 799253 -144790035 - AluSx SINE Alu -75 237 1 250 337 11 32 chr10 799321 799416 -144789872 + L3 LINE CR1 1482 1574 -3 674 327 77 23 chr10 800092 800441 -144788847 + L3 LINE CR1 900 1267 -310 2018 159 3 16 chr10 800699 801014 -144788274 + AluSx SINE Alu 1 311 -1 445 359 80 11 chr10 801447 801709 -144787579 + L3 LINE CR1 1297 1576 -1 420 313 16 1 chr10 802816 802976 -144786312 + L1ME LINE L1 7 169 -5901 1021 214 102 14 chr10 803102 803279 -144786009 + MSTD LTR MaLR 18 178 -187 2215 117 0 10 chr10 803279 803579 -144785709 - AluSq SINE Alu -16 297 1 1021 214 102 14 chr10 803579 803737 -144785551 + MSTD LTR MaLR 178 356 -9 2446 75 0 0 chr10 804610 804902 -144784386 - AluY SINE Alu -19 292 1 268 346 73 0 chr10 805689 805825 -144783463 + MIR SINE MIR 63 208 -54 185 328 164 8 chr10 805985 806107 -144783181 + MIR SINE MIR 122 262 0 309 241 58 11 chr10 806566 806653 -144782635 + L2 LINE L2 3174 3264 -8 1441 158 39 0 chr10 808383 808650 -144780638 - AluJb SINE Alu 0 321 46 1031 157 0 35 chr10 808653 808825 -144780463 + AluJb SINE Alu 147 312 0 422 136 0 0 chr10 808820 808879 -144780409 - AluJb SINE Alu -247 65 7 * 1379 137 26 0 chr10 808890 809116 -144780172 - MER2 DNA MER2_type -112 233 2 314 191 59 112 chr10 809342 809494 -144779794 - L1MEc LINE L1 -2872 3257 3114 518 283 108 36 chr10 809638 809861 -144779427 - L1MEc LINE L1 -4134 2176 1938 344 308 31 54 chr10 810015 810354 -144778934 - L1MEc LINE L1 -861 1629 1325 364 254 65 43 chr10 810375 810513 -144778775 - L1MEc LINE L1 -4909 1210 1070 925 284 104 7 chr10 810528 810940 -144778348 + LTR33 LTR ERVL 2 453 -68 2296 89 0 0 chr10 810940 811220 -144778068 + AluY SINE Alu 1 280 -31 8434 156 22 4 chr10 811220 812659 -144776629 - MLT1A2-int LTR MaLR -186 1465 1 608 129 0 0 chr10 812661 812754 -144776534 - MSTB LTR MaLR -333 93 1 2179 119 10 0 chr10 812813 813116 -144776172 - AluSg SINE Alu -4 306 1 1841 133 91 3 chr10 813355 813641 -144775647 - AluSx SINE Alu -1 311 1 24 0 0 0 chr10 813653 813677 -144775611 + AT_rich Low_complexity Low_complexity 1 24 0 303 228 114 57 chr10 814604 814634 -144774654 + MLT1I LTR MaLR 280 307 -102 1428 201 28 76 chr10 814634 815027 -144774261 - MLT1A2 LTR MaLR 0 374 1 303 228 114 57 chr10 815027 815119 -144774169 + MLT1I LTR MaLR 307 409 0 22 35 0 0 chr10 815167 815196 -144774092 + AT_rich Low_complexity Low_complexity 1 29 0 1385 139 0 42 chr10 815966 816182 -144773106 + AluSg/x SINE Alu 74 307 0 181 111 0 0 chr10 816182 816209 -144773079 + (TAAA)n Simple_repeat Simple_repeat 4 180 0 245 340 65 22 chr10 816259 816436 -144772852 + MIR SINE MIR 10 193 -67 197 315 67 0 chr10 816600 816695 -144772593 + MIR SINE MIR 150 250 -12 187 295 67 19 chr10 817053 817158 -144772130 - L2 LINE L2 -3 3269 3160 2122 95 3 3 chr10 817918 818214 -144771074 + AluSx SINE Alu 11 306 -6 358 266 101 0 chr10 818472 818581 -144770707 + L3 LINE CR1 664 783 -794 549 228 151 53 chr10 818667 818873 -144770415 + MIR SINE MIR 2 227 -35 2099 87 27 7 chr10 820364 820662 -144768626 - AluSq SINE Alu -9 304 1 1948 145 14 0 chr10 820988 821284 -144768004 - AluSx SINE Alu -12 300 1 213 296 157 35 chr10 821565 821680 -144767608 - L2 LINE L2 0 3313 3185 2407 49 0 19 chr10 821688 821995 -144767293 + AluY SINE Alu 1 301 -10 286 274 123 0 chr10 822436 822509 -144766779 + L2 LINE L2 3136 3217 -55 2714 22 0 0 chr10 822931 823242 -144766046 - AluY SINE Alu 0 311 1 2405 67 0 0 chr10 823366 823664 -144765624 + AluY SINE Alu 1 298 -13 202 191 270 0 chr10 823983 824046 -144765242 - MIR SINE MIR -63 145 66 1962 123 20 7 chr10 824495 824796 -144764492 - AluSx SINE Alu -7 305 1 1859 82 4 0 chr10 825064 825308 -144763980 - AluSq SINE Alu -68 245 1 242 214 107 0 chr10 825382 825438 -144763850 + L2 LINE L2 3211 3272 0 1990 109 7 7 chr10 825506 825816 -144763472 - AluSx SINE Alu 0 310 1 296 265 312 12 chr10 826063 826233 -144763055 - L2 LINE L2 -19 3294 3074 587 279 293 12 chr10 826365 827127 -144762161 - L2 LINE L2 -1050 2264 1289 21 36 0 0 chr10 827322 827350 -144761938 + AT_rich Low_complexity Low_complexity 1 28 0 194 246 56 84 chr10 828114 828256 -144761032 + MER5A DNA MER1_type 10 147 -42 21 0 0 0 chr10 829309 829330 -144759958 + AT_rich Low_complexity Low_complexity 1 21 0 1789 169 0 16 chr10 829330 829643 -144759645 - AluJb SINE Alu 0 312 5 514 290 54 11 chr10 829794 829980 -144759308 - MER3 DNA MER1_type -1 208 15 2046 122 0 13 chr10 830357 830669 -144758619 - AluSq SINE Alu -4 309 2 2126 124 0 0 chr10 830925 831224 -144758064 + AluSq SINE Alu 1 299 -14 2349 63 13 0 chr10 831484 831784 -144757504 - AluY SINE Alu -7 304 1 265 174 22 0 chr10 832810 832856 -144756432 + MER5A DNA MER1_type 2 48 -141 1199 192 35 52 chr10 832856 833159 -144756129 - L1 LINE L1 -3222 3945 3638 2093 119 6 3 chr10 833159 833470 -144755818 - AluSx SINE Alu 0 312 1 1199 192 35 52 chr10 833470 833759 -144755529 - L1 LINE L1 -3529 3638 3252 * 9194 197 81 25 chr10 833744 836377 -144752911 - L1 LINE L1 -4178 2990 181 2168 76 3 10 chr10 836377 836691 -144752597 - AluY SINE Alu 0 311 1 9194 197 81 25 chr10 836691 836880 -144752408 - L1 LINE L1 -6987 181 4 2145 96 3 0 chr10 837604 837895 -144751393 + AluSq SINE Alu 1 292 -21 888 126 0 7 chr10 838700 838835 -144750453 + AluJo SINE Alu 1 134 -178 357 305 177 55 chr10 839112 839379 -144749909 - L1M4 LINE L1 -801 5345 5112 1901 116 35 3 chr10 839379 839663 -144749625 + AluSx SINE Alu 2 294 -18 357 305 177 55 chr10 839663 839982 -144749306 - L1M4 LINE L1 -1034 5112 4687 1605 154 62 0 chr10 840977 841249 -144748039 + AluJb SINE Alu 1 289 -23 1780 114 0 22 chr10 844217 844490 -144744798 - AluSx SINE Alu -4 308 42 202 191 270 0 chr10 845006 845069 -144744219 - MIR SINE MIR -63 145 66 2118 104 3 3 chr10 845520 845818 -144743470 - AluSg SINE Alu -12 298 1 2183 75 20 3 chr10 845820 846114 -144743174 - AluSq SINE Alu -13 300 2 2005 129 10 3 chr10 847539 847842 -144741446 - AluSx SINE Alu -6 306 2 202 294 0 0 chr10 848740 848791 -144740497 - MIR3 SINE MIR -6 202 152 616 156 0 0 chr10 848907 849003 -144740285 + Tigger4(Zombi) DNA MER2_type 1 96 -2635 622 259 0 8 chr10 849039 849170 -144740118 + FLAM_A SINE Alu 2 131 -2 1761 159 6 22 chr10 849172 849486 -144739802 + AluJb SINE Alu 1 309 -3 22 35 0 0 chr10 849486 849515 -144739773 + AT_rich Low_complexity Low_complexity 1 29 0 3278 160 40 5 chr10 849515 850071 -144739217 + Tigger4(Zombi) DNA MER2_type 2156 2730 -1 266 263 132 0 chr10 852063 852139 -144737149 + L2 LINE L2 3168 3253 -19 3676 201 84 22 chr10 852520 852824 -144736464 + MER21B LTR ERV1 1 285 -578 2100 95 0 23 chr10 852824 853129 -144736159 + AluSx SINE Alu 1 298 -14 3676 201 84 22 chr10 853129 853623 -144735665 + MER21B LTR ERV1 285 848 -15 199 167 0 0 chr10 853833 853863 -144735425 + L2 LINE L2 3216 3245 -27 2462 62 0 0 chr10 853913 854218 -144735070 + AluY SINE Alu 1 305 -6 2094 117 0 0 chr10 854404 854702 -144734586 + AluSq SINE Alu 1 298 -15 2307 121 70 17 chr10 854859 855274 -144734014 + LTR23 LTR ERV1 1 437 0 3554 208 54 60 chr10 856152 857094 -144732194 + LTR23-int LTR ERV1 1558 2493 -3838 1070 62 72 135 chr10 857094 857302 -144731986 + MER30 DNA MER1_type 1 195 -35 708 203 172 55 chr10 857318 857492 -144731796 + LTR23-int LTR ERV1 769 984 -4139 1276 145 97 62 chr10 857492 857782 -144731506 + AluJb SINE Alu 1 300 -12 708 203 172 55 chr10 857782 857863 -144731425 + LTR23-int LTR ERV1 984 1054 -4069 319 247 45 11 chr10 857864 857953 -144731335 + MER34C LTR ERV1 241 332 -253 3048 178 95 140 chr10 857963 858563 -144730725 + LTR23-int LTR ERV1 1160 1785 -3338 1570 144 122 0 chr10 858563 858826 -144730462 + AluSg SINE Alu 1 295 -5 3048 178 95 140 chr10 858826 859335 -144729953 + LTR23-int LTR ERV1 1785 2315 -2808 534 77 26 0 chr10 859335 859413 -144729875 + AluSg/x SINE Alu 217 296 -16 1922 102 0 22 chr10 859422 859697 -144729591 + AluSg SINE Alu 6 274 -36 3048 178 95 140 chr10 859697 860075 -144729213 + LTR23-int LTR ERV1 2323 2664 -2459 839 153 8 0 chr10 860075 860206 -144729082 + FRAM SINE Alu 35 166 -10 3587 129 92 48 chr10 860207 860425 -144728863 + LTR23-int LTR ERV1 3810 4017 -2314 2089 67 3 89 chr10 860425 860752 -144728536 + AluY SINE Alu 1 299 -12 3587 129 92 48 chr10 860752 861286 -144728002 + LTR23-int LTR ERV1 4017 4595 -1736 2160 91 3 0 chr10 861315 861601 -144727687 + AluSp SINE Alu 1 287 -26 241 313 50 0 chr10 861869 861949 -144727339 + MIR SINE MIR 97 180 -82 1943 119 0 11 chr10 862015 862300 -144726988 - AluSx SINE Alu -30 282 1 210 42 62 42 chr10 862352 862400 -144726888 + T-rich Low_complexity Low_complexity 3 51 0 1489 151 48 11 chr10 862739 863011 -144726277 + AluJb SINE Alu 1 282 -30 183 254 51 17 chr10 863221 863280 -144726008 - MIR SINE MIR -132 76 16 2089 92 0 35 chr10 863368 863684 -144725604 - AluSq SINE Alu -8 305 1 2057 106 3 13 chr10 864555 864857 -144724431 - AluSx SINE Alu -13 299 1 25 0 0 0 chr10 865244 865269 -144724019 + AT_rich Low_complexity Low_complexity 1 25 0 189 303 112 0 chr10 865400 865489 -144723799 + L2 LINE L2 3195 3293 -20 2089 103 0 0 chr10 865778 866087 -144723201 + AluSx SINE Alu 1 309 0 533 300 55 38 chr10 866503 866740 -144722548 + L2 LINE L2 3069 3309 -4 1260 147 100 47 chr10 867365 867644 -144721644 - AluJo SINE Alu -18 294 1 479 203 0 0 chr10 868239 868318 -144720970 - tRNA-Ser-TCA tRNA tRNA -4 81 3 2005 111 3 10 chr10 868523 868821 -144720467 - AluY SINE Alu -15 296 1 387 0 0 0 chr10 868893 868936 -144720352 + (TTTA)n Simple_repeat Simple_repeat 1 43 0 511 162 0 76 chr10 868938 869043 -144720245 - AluJo SINE Alu -31 281 185 602 224 8 0 chr10 869055 869180 -144720108 - AluJo SINE Alu -186 126 1 1925 130 3 89 chr10 869244 869613 -144719675 + MER1B DNA MER1_type 1 337 0 2362 87 3 0 chr10 870308 870620 -144718668 - AluSp SINE Alu 0 313 1 1790 162 7 0 chr10 870818 871120 -144718168 - AluSx SINE Alu -8 304 1 204 245 82 0 chr10 871354 871403 -144717885 - MIR SINE MIR -126 82 30 321 130 0 0 chr10 872228 872274 -144717014 - tRNA-Gly-GGC tRNA tRNA -28 46 1 24 32 0 0 chr10 872428 872459 -144716829 + AT_rich Low_complexity Low_complexity 1 31 0 2226 61 0 17 chr10 872513 872807 -144716481 - AluY SINE Alu -22 289 1 1961 134 3 3 chr10 872945 873251 -144716037 - AluJb SINE Alu -6 306 1 506 125 313 9 chr10 873278 873390 -144715898 - LTR23 LTR ERV1 0 437 292 505 189 54 0 chr10 873437 873548 -144715740 - LTR23-int LTR ERV1 -223 4900 4784 6021 140 36 12 chr10 873564 874606 -144714682 - LTR23-int LTR ERV1 -663 5668 4602 1507 188 4 4 chr10 874606 874878 -144714410 + AluJo SINE Alu 3 274 -38 307 336 134 16 chr10 875427 875748 -144713540 + L1M2 LINE L1 774 1132 -5717 2173 109 3 0 chr10 876206 876509 -144712779 + AluSp SINE Alu 1 304 -9 642 189 104 25 chr10 876759 876960 -144712328 - Charlie5 DNA MER1_type -16 2596 2380 2182 119 9 0 chr10 877658 877986 -144711302 - L1PA10 LINE L1 -11 6157 5827 442 271 97 20 chr10 878647 878894 -144710394 - L1MC5 LINE L1 -741 7220 6955 251 273 20 10 chr10 879064 879163 -144710125 - L1MC4 LINE L1 -1133 6909 6810 311 317 154 48 chr10 879356 879564 -144709724 - L1MC4a LINE L1 -1037 6771 6542 1648 176 91 18 chr10 879595 879925 -144709363 - MLT1A1 LTR MaLR 0 365 12 2038 118 0 0 chr10 879944 880231 -144709057 - AluSx SINE Alu -25 287 1 918 214 104 6 chr10 880379 880739 -144708549 - L1ME LINE L1 -629 5537 5149 1969 130 31 0 chr10 880771 881063 -144708225 - AluSx SINE Alu -11 301 1 1721 286 113 38 chr10 881063 882421 -144706867 - L1MEc LINE L1 -4928 1468 9 293 233 128 8 chr10 882415 882548 -144706740 - L1ME4a LINE L1 0 6121 5973 * 354 145 0 0 chr10 882623 882692 -144706596 - L1MA4A LINE L1 -5 6298 6230 737 168 74 62 chr10 883504 883717 -144705571 - L1MA7 LINE L1 -52 6941 6739 2684 137 43 2 chr10 883722 883882 -144705406 - L1MA4A LINE L1 -346 5957 5805 285 29 0 0 chr10 883882 883916 -144705372 + (TG)n Simple_repeat Simple_repeat 2 35 0 2684 137 43 2 chr10 883916 884201 -144705087 - L1MA4A LINE L1 -498 5805 5494 * 15534 174 43 18 chr10 884197 885591 -144703697 - L1MA7 LINE L1 -716 6289 4932 2142 116 0 0 chr10 885591 885884 -144703404 - AluSx SINE Alu -19 293 1 15534 174 43 18 chr10 885884 890600 -144698688 - L1MA7 LINE L1 -2073 4932 3 21 0 0 0 chr10 890611 890632 -144698656 + AT_rich Low_complexity Low_complexity 1 21 0 2419 74 0 0 chr10 891465 891776 -144697512 - AluY SINE Alu 0 311 1 301 196 137 20 chr10 891881 891983 -144697305 - L1M4 LINE L1 -1285 4861 4748 480 314 54 4 chr10 892603 892864 -144696424 - L1M4 LINE L1 -1453 4693 4420 34 72 0 0 chr10 893005 893074 -144696214 + AT_rich Low_complexity Low_complexity 1 69 0 1346 199 21 28 chr10 893292 893579 -144695709 - AluJo SINE Alu -25 287 3 3513 167 9 36 chr10 893592 894251 -144695037 - L1MA7 LINE L1 -1 6290 5650 459 228 0 0 chr10 894256 894335 -144694953 + Tigger5 DNA MER2_type 1 79 -2244 2187 136 21 38 chr10 894382 894670 -144694618 - L1MA7 LINE L1 -643 5648 5365 2049 129 7 0 chr10 894670 894964 -144694324 - AluSx SINE Alu -16 296 1 2187 136 21 38 chr10 894964 895152 -144694136 - L1MA7 LINE L1 -926 5365 5175 413 301 98 33 chr10 895135 895471 -144693817 - L1M4 LINE L1 -1735 4411 4054 * 26 0 0 0 chr10 895746 895772 -144693516 + AT_rich Low_complexity Low_complexity 1 26 0 1778 165 42 22 chr10 895772 896129 -144693159 - L1MB3 LINE L1 -7 6176 5813 690 155 66 94 chr10 896131 896312 -144692976 - MLT2B2 LTR ERVL 0 515 340 1289 277 58 16 chr10 896412 897003 -144692285 - L1MDb LINE L1 -3890 2650 2112 4025 190 30 7 chr10 897716 898265 -144691023 + MER44D DNA MER2_type 6 448 -2039 1517 101 8 38 chr10 898265 898503 -144690785 + AluSx SINE Alu 1 231 -81 4025 190 30 7 chr10 898503 898665 -144690623 + MER44D DNA MER2_type 448 605 0 2172 102 3 0 chr10 898694 898997 -144690291 - AluY SINE Alu -7 304 1 1779 212 50 18 chr10 898999 899495 -144689793 - L1MDb LINE L1 -4488 2052 1541 24137 31 2 0 chr10 899510 903154 -144686134 - L1PA3 LINE L1 0 6155 2513 3648 63 9 0 chr10 903158 903618 -144685670 - L1PA3 LINE L1 -5626 520 57 733 237 54 18 chr10 903619 903888 -144685400 - L1MDb LINE L1 -4988 1555 1196 778 80 0 0 chr10 904080 904180 -144685108 - AluSp/q SINE Alu -15 298 199 1370 71 0 0 chr10 904191 904360 -144684928 + AluY SINE Alu 1 169 -142 834 206 17 0 chr10 904468 904643 -144684645 + AluY SINE Alu 111 288 -23 1032 171 0 6 chr10 904669 904850 -144684438 - AluSx SINE Alu -132 180 1 448 247 192 48 chr10 905289 905763 -144683525 + L1M2 LINE L1 756 1297 -5552 230 351 21 64 chr10 905986 906174 -144683114 - L1MDb LINE L1 -6310 230 51 801 324 21 24 chr10 906245 906622 -144682666 - L1MEc LINE L1 -4394 2002 1627 2011 122 0 0 chr10 906688 906975 -144682313 - AluSx SINE Alu -25 287 1 456 300 39 39 chr10 907840 908123 -144681165 + L1MB3 LINE L1 5304 5586 -2222 1075 123 0 7 chr10 908577 908732 -144680556 + FRAM SINE Alu 1 154 -12 1359 191 61 29 chr10 908979 909324 -144679964 + L1MB3 LINE L1 5807 6162 -21 1243 77 0 22 chr10 909325 909490 -144679798 - AluSc SINE Alu -13 296 134 2136 119 7 0 chr10 909490 909793 -144679495 - AluSx SINE Alu -7 305 1 1243 77 0 22 chr10 909793 909808 -144679480 - AluSc SINE Alu -175 134 120 696 188 5 0 chr10 909995 910214 -144679074 + (CA)n Simple_repeat Simple_repeat 1 220 0 516 244 0 0 chr10 910262 910442 -144678846 + (CA)n Simple_repeat Simple_repeat 1 180 0 189 171 0 0 chr10 913390 913425 -144675863 + T-rich Low_complexity Low_complexity 1 35 0 4867 174 16 7 chr10 913433 914410 -144674878 - L1PB4 LINE L1 -3 6153 5171 3242 187 14 6 chr10 914411 915053 -144674235 - L1PB4 LINE L1 -1131 5015 4369 215 244 9 0 chr10 915172 915287 -144674001 + (CA)n Simple_repeat Simple_repeat 1 116 0 318 165 25 41 chr10 915448 915569 -144673719 + GA-rich Low_complexity Low_complexity 2 120 0 1062 184 9 18 chr10 915806 916029 -144673259 - AluSg SINE Alu -52 258 38 2058 118 0 0 chr10 917088 917377 -144671911 + AluSx SINE Alu 11 299 -13 591 285 29 17 chr10 917498 917670 -144671618 + MIR SINE MIR 64 237 -25 517 197 8 47 chr10 917730 917857 -144671431 + MER33 DNA MER1_type 34 155 -169 450 297 27 76 chr10 917867 918130 -144671158 + AluJb SINE Alu 1 250 -52 1790 163 0 0 chr10 918340 918623 -144670665 + AluJb SINE Alu 1 283 -29 238 228 88 0 chr10 919463 919520 -144669768 - AluJ/FLAM SINE Alu -240 62 1 1733 130 23 47 chr10 919599 919899 -144669389 + AluSx SINE Alu 1 293 -19 262 264 11 11 chr10 919900 919987 -144669301 - L1ME LINE L1 -325 5796 5710 183 222 19 56 chr10 920003 920057 -144669231 + L2 LINE L2 3006 3057 -215 30 0 0 0 chr10 921516 921546 -144667742 + AT_rich Low_complexity Low_complexity 1 30 0 180 0 0 0 chr10 921831 921851 -144667437 + (A)n Simple_repeat Simple_repeat 1 20 0 1960 79 120 0 chr10 924150 924416 -144664872 - AluSc SINE Alu 0 299 2 251 250 12 0 chr10 924495 924575 -144664713 + (CCCCAG)n Simple_repeat Simple_repeat 6 86 0 2276 74 0 0 chr10 925906 926203 -144663085 + AluY SINE Alu 1 297 -14 3366 176 18 22 chr10 926883 927122 -144662166 + L1MA4 LINE L1 5590 5828 -472 2295 88 0 3 chr10 927122 927427 -144661861 + AluY SINE Alu 1 304 -7 3366 176 18 22 chr10 927427 927898 -144661390 + L1MA4 LINE L1 5828 6297 -3 21 0 0 0 chr10 927908 927929 -144661359 + AT_rich Low_complexity Low_complexity 1 21 0 1285 201 115 3 chr10 927940 928339 -144660949 - MER31A LTR ERV1 -1 660 11 378 0 0 0 chr10 928939 928981 -144660307 + (CA)n Simple_repeat Simple_repeat 1 42 0 2213 93 0 7 chr10 929186 929488 -144659800 + AluSx SINE Alu 1 300 -12 231 152 0 0 chr10 929887 929933 -144659355 + CT-rich Low_complexity Low_complexity 1 46 0 2195 83 0 7 chr10 930029 930329 -144658959 - AluSx SINE Alu -9 303 6 643 311 27 18 chr10 931073 931292 -144657996 - MIR SINE MIR -4 258 38 231 302 0 0 chr10 931869 931932 -144657356 + HAL1b LINE L1 245 307 -1041 264 269 90 35 chr10 931940 932085 -144657203 + L2 LINE L2 1390 1542 -1772 997 105 0 0 chr10 932092 932225 -144657063 + AluSq/x SINE Alu 1 133 -180 2309 79 0 3 chr10 932227 932532 -144656756 + AluY SINE Alu 1 304 -7 574 264 116 27 chr10 932538 932796 -144656492 + L2 LINE L2 1552 1832 -1482 1904 112 7 17 chr10 933318 933605 -144655683 - AluSx SINE Alu -26 286 3 23 0 0 0 chr10 933690 933713 -144655575 + AT_rich Low_complexity Low_complexity 1 23 0 1473 141 28 8 chr10 933930 934179 -144655109 + AluJb SINE Alu 6 259 -53 1282 195 64 20 chr10 934617 934961 -144654327 - L1M4 LINE L1 -2117 4029 3671 2090 104 3 0 chr10 935078 935367 -144653921 + AluSg SINE Alu 3 292 -18 376 114 46 80 chr10 935487 935662 -144653626 + (TATAA)n Simple_repeat Simple_repeat 4 172 0 24 32 0 0 chr10 935667 935698 -144653590 + AT_rich Low_complexity Low_complexity 1 31 0 596 190 7 49 chr10 935728 935783 -144653505 - L1M4 LINE L1 -2520 3626 3570 2260 92 3 0 chr10 935783 936087 -144653201 - AluSq SINE Alu -8 305 1 596 190 7 49 chr10 936087 936173 -144653115 - L1M4 LINE L1 -2576 3570 3491 1552 107 37 97 chr10 936291 936590 -144652698 - AluSx SINE Alu -7 305 25 2416 47 0 3 chr10 936887 937186 -144652102 - AluY SINE Alu -13 298 1 2177 29 4 7 chr10 938142 938414 -144650874 + AluY SINE Alu 27 297 -14 209 261 0 0 chr10 939005 939051 -144650237 - MIR SINE MIR -5 257 212 2188 90 0 10 chr10 939917 940227 -144649061 - AluSg SINE Alu -3 307 1 269 303 68 15 chr10 940305 940437 -144648851 - L2 LINE L2 -222 3050 2912 554 245 206 12 chr10 940911 941164 -144648124 - L1ME3 LINE L1 -31 6131 5830 231 224 20 0 chr10 941556 941605 -144647683 - L1ME3 LINE L1 -648 5518 5469 276 150 21 16 chr10 941607 941670 -144647618 - L1ME3 LINE L1 -729 5433 5366 2506 167 106 0 chr10 941672 942193 -144647095 - L1MC1 LINE L1 -2 6331 5756 428 221 33 13 chr10 944187 944364 -144644924 + MER20 DNA MER1_type 1 218 -1 2306 81 7 10 chr10 945721 946030 -144643258 - AluSg SINE Alu -2 308 1 538 250 88 7 chr10 948317 948463 -144640825 - MER105 DNA DNA -1 203 46 232 175 0 0 chr10 948463 948503 -144640785 - MER58 DNA MER1_type 0 2420 2381 827 206 122 55 chr10 948505 948743 -144640545 - MER58 DNA MER1_type -86 255 2 1909 153 0 0 chr10 949077 949365 -144639923 - AluSx SINE Alu -18 294 7 285 75 0 0 chr10 949471 949511 -144639777 + (TG)n Simple_repeat Simple_repeat 2 41 0 636 240 8 0 chr10 949676 949797 -144639491 + MER2 DNA MER2_type 1 122 -223 738 226 7 0 chr10 949809 949946 -144639342 + Tigger3(Golem) DNA MER2_type 5 142 -2887 528 155 68 142 chr10 949944 950092 -144639196 + Tigger3(Golem) DNA MER2_type 2773 2909 -120 * 345 267 155 0 chr10 950589 950705 -144638583 + Tigger3(Golem) DNA MER2_type 2888 3021 -8 778 162 146 22 chr10 950722 950907 -144638381 + MER2 DNA MER2_type 138 345 0 533 137 226 32 chr10 950986 951110 -144638178 - AluSg/x SINE Alu -29 283 136 21 0 0 0 chr10 951897 951918 -144637370 + GC_rich Low_complexity Low_complexity 1 21 0 1834 131 14 0 chr10 952739 953030 -144636258 - AluSp SINE Alu -18 295 1 624 203 199 16 chr10 953144 953395 -144635893 - Charlie1 DNA MER1_type 0 2761 2465 2913 160 71 11 chr10 953430 953968 -144635320 - MER6A DNA MER2_type 0 605 36 3088 178 44 58 chr10 953982 954770 -144634518 - Charlie1 DNA MER1_type -397 2364 1588 * 3923 203 110 92 chr10 954758 954961 -144634327 - Tigger1 DNA MER2_type -210 2208 2010 2065 118 0 0 chr10 954961 955249 -144634039 - AluSg SINE Alu -22 288 1 3923 203 110 92 chr10 955249 956091 -144633197 - Tigger1 DNA MER2_type -408 2010 1185 1549 134 17 0 chr10 956091 956323 -144632965 - AluSx SINE Alu -19 293 58 3923 203 110 92 chr10 956323 956865 -144632423 - Tigger1 DNA MER2_type -1233 1185 654 1150 111 0 33 chr10 956865 957045 -144632243 - AluJo SINE Alu -15 297 124 3923 203 110 92 chr10 957045 957423 -144631865 - Tigger1 DNA MER2_type -1764 654 1 1885 190 114 12 chr10 957838 958260 -144631028 + MLT1C LTR MaLR 1 465 -2 2224 62 7 0 chr10 959276 959564 -144629724 - AluSg SINE Alu -20 290 1 327 337 54 30 chr10 961459 961625 -144627663 - L3 LINE CR1 -423 1154 985 214 342 111 0 chr10 961663 961780 -144627508 + MIR SINE MIR 73 202 -60 626 328 111 32 chr10 961842 962275 -144627013 - L3 LINE CR1 -605 972 506 2013 122 0 3 chr10 962554 962850 -144626438 + AluSx SINE Alu 1 295 -17 194 309 0 0 chr10 963066 963121 -144626167 - L2 LINE L2 -1 3271 3217 2157 154 3 11 chr10 963578 963929 -144625359 + MER7A DNA MER2_type 1 346 0 262 305 86 51 chr10 964045 964242 -144625046 + L2 LINE L2 926 1129 -2185 251 133 22 22 chr10 964256 964268 -144625020 - MER46A DNA MER2_type -83 153 142 1149 176 134 58 chr10 964268 964424 -144624864 + MER46B DNA MER2_type 3 71 -2660 1867 135 7 3 chr10 964424 964720 -144624568 + AluSx SINE Alu 1 297 -15 1149 176 134 58 chr10 964720 964876 -144624412 + MER46B DNA MER2_type 71 214 -22 1932 293 67 30 chr10 965577 965672 -144623616 + L1MDa LINE L1 21 111 -6429 1920 140 7 0 chr10 965672 965965 -144623323 + AluSg SINE Alu 1 295 -15 1932 293 67 30 chr10 965965 966614 -144622674 + L1MDa LINE L1 111 793 -5747 4344 202 175 20 chr10 966659 967450 -144621838 + L1MDa LINE L1 874 1541 -4999 2096 106 13 10 chr10 967450 967761 -144621527 - AluSx SINE Alu 0 312 1 4344 202 175 20 chr10 967761 968348 -144620940 + L1MDa LINE L1 1541 2466 -4074 2112 246 92 30 chr10 968356 968988 -144620300 + L1MB8 LINE L1 3776 4367 -1875 2187 85 0 3 chr10 968988 969282 -144620006 - AluY SINE Alu -18 293 1 2112 246 92 30 chr10 969282 969583 -144619705 + L1MB8 LINE L1 4367 4648 -1594 2335 96 59 31 chr10 969583 969937 -144619351 - THE1B LTR MaLR 0 364 1 2112 246 92 30 chr10 969937 970616 -144618672 + L1MB8 LINE L1 4648 5489 -753 * 2150 154 27 36 chr10 970613 971054 -144618234 + L1MA4A LINE L1 5674 6110 -193 2039 47 95 0 chr10 971066 971340 -144617948 + AluY SINE Alu 1 300 -11 280 227 40 0 chr10 971348 971423 -144617865 + L1MA4A LINE L1 6182 6259 -44 2160 201 121 53 chr10 971435 972081 -144617207 + L1MB8 LINE L1 5473 6162 -16 1698 248 127 19 chr10 972083 972237 -144617051 + L1MD2 LINE L1 5587 5723 -636 180 0 0 0 chr10 972237 972257 -144617031 + (TA)n Simple_repeat Simple_repeat 2 21 0 1698 248 127 19 chr10 972257 972788 -144616500 + L1MD2 LINE L1 5723 6346 -13 2041 132 0 7 chr10 972790 973093 -144616195 + AluSx SINE Alu 1 301 -11 713 192 215 0 chr10 974524 974743 -144614545 + MER33 DNA MER1_type 55 320 -4 22 0 0 0 chr10 974840 974862 -144614426 + AT_rich Low_complexity Low_complexity 1 22 0 1816 118 21 0 chr10 975317 975597 -144613691 - AluSp SINE Alu -25 288 3 1595 177 21 67 chr10 976560 976933 -144612355 - MLT1B LTR MaLR 0 390 35 702 215 44 39 chr10 976948 977153 -144612135 + MER3 DNA MER1_type 1 206 -3 200 232 54 18 chr10 978168 978224 -144611064 + MIR SINE MIR 93 150 -112 1553 70 0 19 chr10 978264 978477 -144610811 - L1PA7 LINE L1 0 6154 5946 2112 111 7 0 chr10 978767 979065 -144610223 - AluSx SINE Alu -12 300 1 2212 101 0 0 chr10 979520 979817 -144609471 + AluY SINE Alu 1 297 -14 1676 98 161 4 chr10 979884 980139 -144609149 + AluSc SINE Alu 2 296 -3 22 56 0 0 chr10 980896 980932 -144608356 + AT_rich Low_complexity Low_complexity 1 36 0 426 154 56 58 chr10 981202 981304 -144607984 - MLT1E2 LTR MaLR 0 626 468 30 0 0 0 chr10 981327 981357 -144607931 + AT_rich Low_complexity Low_complexity 1 30 0 803 147 0 0 chr10 981817 981933 -144607355 - FLAM_C SINE Alu -23 120 5 2112 123 0 0 chr10 982207 982507 -144606781 - AluSx SINE Alu -12 300 1 2117 98 27 0 chr10 982652 982947 -144606341 - AluSg SINE Alu -7 303 1 2343 68 0 13 chr10 983269 983576 -144605712 + AluY SINE Alu 1 303 -8 2195 92 0 13 chr10 984317 984621 -144604667 + AluSg SINE Alu 1 300 -10 432 167 94 10 chr10 984736 984832 -144604456 + AluJb SINE Alu 191 294 -18 213 204 0 74 chr10 985290 985659 -144603629 + (CTGGGG)n Simple_repeat Simple_repeat 1 341 0 224 318 124 8 chr10 986486 986615 -144602673 + MIR3 SINE MIR 44 187 -21 2159 92 3 0 chr10 988087 988382 -144600906 + AluSg SINE Alu 1 296 -14 1835 94 7 42 chr10 988469 988778 -144600510 + AluY SINE Alu 1 298 -13 935 417 41 17 chr10 992814 993109 -144596179 - AluSx SINE Alu 0 302 1 8107 138 50 38 chr10 995291 996731 -144592557 - Tigger1 DNA MER2_type -960 1458 1 390 265 108 64 chr10 997529 997733 -144591555 - HAL1 LINE L1 -2268 239 27 1176 131 0 0 chr10 997809 997984 -144591304 - AluSg/x SINE Alu -17 295 121 21 0 0 0 chr10 997984 998005 -144591283 + AT_rich Low_complexity Low_complexity 1 21 0 1983 124 3 0 chr10 998005 998296 -144590992 - AluSx SINE Alu -20 292 1 2461 53 3 0 chr10 999736 1000040 -144589248 + AluY SINE Alu 1 305 -6 799 95 112 0 chr10 1000062 1000178 -144589110 + AluSg SINE Alu 2 130 -180 296 54 0 0 chr10 1000210 1000247 -144589041 - Alu SINE Alu -9 291 255 489 111 0 0 chr10 1000369 1000441 -144588847 - AluS SINE Alu -236 73 2 1144 163 5 45 chr10 1000462 1000683 -144588605 + AluJb SINE Alu 99 310 -2 690 280 57 0 chr10 1002028 1002221 -144587067 - MER58A DNA MER1_type -15 209 6 976 225 86 47 chr10 1004207 1004567 -144584721 + MLT1A2 LTR MaLR 1 374 0 1814 251 116 21 chr10 1004567 1005239 -144584049 + MLT1A2-int LTR MaLR 1 736 -635 309 262 36 0 chr10 1005359 1005443 -144583845 + MLT1A2-int LTR MaLR 686 772 -963 1766 251 21 23 chr10 1005502 1005977 -144583311 + MLT1A2-int LTR MaLR 1262 1735 0 623 226 11 45 chr10 1005985 1006162 -144583126 + MLT1A2 LTR MaLR 9 179 -195 2284 74 3 3 chr10 1006215 1006513 -144582775 - AluSc SINE Alu -11 298 1 414 320 5 2 chr10 1006540 1006723 -144582565 + MLT1B LTR MaLR 190 374 0 1746 166 47 52 chr10 1009070 1009455 -144579833 - MLT1B LTR MaLR -7 383 1 312 304 97 32 chr10 1009616 1009833 -144579455 + L2 LINE L2 2945 3175 -138 1944 170 77 20 chr10 1010258 1010659 -144578629 - MSTA LTR MaLR 0 428 5 227 321 0 57 chr10 1010671 1010777 -144578511 + L2 LINE L2 3127 3226 -87 1342 230 88 65 chr10 1011966 1012601 -144576687 - MLT1E1 LTR MaLR 0 654 5 245 309 21 69 chr10 1013642 1013683 -144575605 + L2 LINE L2 2305 2346 -968 2405 45 0 0 chr10 1013683 1013974 -144575314 - AluY SINE Alu -20 291 1 245 309 21 69 chr10 1013974 1014120 -144575168 + L2 LINE L2 2346 2483 -831 198 0 0 0 chr10 1014400 1014422 -144574866 + (TTTG)n Simple_repeat Simple_repeat 3 24 0 2075 103 0 0 chr10 1014425 1014706 -144574582 - AluSx SINE Alu -31 281 1 239 236 33 26 chr10 1015317 1015411 -144573877 - L1MC5 LINE L1 -10 7916 7679 656 271 73 50 chr10 1015960 1016300 -144572988 - L1MC4 LINE L1 -197 7845 7498 2034 67 63 25 chr10 1017333 1017618 -144571670 + AluSp SINE Alu 1 296 -17 1222 111 0 0 chr10 1019780 1019942 -144569346 - AluSg/x SINE Alu -2 310 149 12852 153 48 12 chr10 1019952 1021839 -144567449 + Tigger1 DNA MER2_type 15 2002 -416 2297 124 0 3 chr10 1021839 1022145 -144567143 - AluSx SINE Alu -7 305 1 12852 153 48 12 chr10 1022145 1022578 -144566710 + Tigger1 DNA MER2_type 2002 2418 0 348 359 0 0 chr10 1023901 1024043 -144565245 - L1PB4 LINE L1 -9 6147 6006 634 215 29 53 chr10 1024231 1024440 -144564848 - L1PB4 LINE L1 -135 6021 5818 1916 155 3 10 chr10 1024932 1025242 -144564046 - AluJb SINE Alu -4 308 1 234 224 20 0 chr10 1027654 1027703 -144561585 + L2 LINE L2 3259 3308 -5 1108 214 59 2 chr10 1031143 1031549 -144557739 - L1MB4 LINE L1 -6 6174 5698 1854 153 43 3 chr10 1082125 1082407 -144506881 + AluSx SINE Alu 1 293 -19 208 170 38 0 chr10 1084046 1084099 -144505189 + CT-rich Low_complexity Low_complexity 2 56 0 2148 118 17 0 chr10 1084099 1084388 -144504900 - AluSg SINE Alu -16 294 1 186 294 96 75 chr10 1085836 1085982 -144503306 + MIR SINE MIR 58 206 -56 2596 229 74 14 chr10 1088430 1089330 -144499958 + L1MCa LINE L1 748 1792 -4634 1751 258 56 16 chr10 1089434 1090078 -144499210 - L1M4 LINE L1 -1980 4166 3497 294 296 157 26 chr10 1090206 1090629 -144498659 + L1ME3A LINE L1 5138 5628 -542 385 295 66 24 chr10 1090664 1090830 -144498458 + MER5A DNA MER1_type 16 188 -1 268 245 32 0 chr10 1090985 1091079 -144498209 + L1ME3A LINE L1 5855 5951 -219 1796 122 0 4 chr10 1091198 1091453 -144497835 - AluJb SINE Alu 0 312 59 390 248 8 48 chr10 1091935 1092060 -144497228 - MARNA DNA Mariner -345 241 122 280 267 30 30 chr10 1092333 1092390 -144496898 - L1MA10 LINE L1 0 6334 6278 1343 241 73 27 chr10 1092390 1092918 -144496370 - L1ME1 LINE L1 -44 6122 5550 650 216 63 11 chr10 1092916 1093106 -144496182 + L1MCa LINE L1 16 215 -6211 * 1092 256 46 3 chr10 1096813 1097180 -144492108 - L1ME1 LINE L1 -2719 3427 3045 245 304 78 9 chr10 1097790 1097905 -144491383 - Charlie7 DNA MER1_type -736 1876 1754 492 241 76 19 chr10 1098843 1099001 -144490287 + Charlie8 DNA MER1_type 72 238 -2179 325 228 79 44 chr10 1099212 1099326 -144489962 - L1MC4 LINE L1 -1 8041 7924 5864 142 13 25 chr10 1099370 1100119 -144489169 - L1MC1 LINE L1 -8 6325 5591 2225 127 42 23 chr10 1100119 1100473 -144488815 + THE1B LTR MaLR 2 362 -2 5864 142 13 25 chr10 1100473 1100752 -144488536 - L1MC1 LINE L1 -742 5591 5310 1047 101 0 0 chr10 1100752 1100891 -144488397 - AluY SINE Alu -6 305 167 276 80 21 0 chr10 1100891 1100955 -144488333 - L1MC1 LINE L1 -850 5296 5232 2774 219 58 32 chr10 1101085 1102066 -144487222 - L1MDa LINE L1 -2820 3720 2714 1049 163 6 0 chr10 1102070 1102266 -144487022 - AluJo SINE Alu 0 322 126 3083 207 56 41 chr10 1102268 1103228 -144486060 - L1MDa LINE L1 -3834 2706 1740 1721 88 4 9 chr10 1103228 1103456 -144485832 - AluY SINE Alu -6 305 79 371 238 6 0 chr10 1104217 1104389 -144484899 + CT-rich Low_complexity Low_complexity 2 174 0 257 122 67 22 chr10 1104405 1104495 -144484793 + (TCTCTG)n Simple_repeat Simple_repeat 2 95 0 198 204 45 0 chr10 1106446 1106490 -144482798 - MIR3 SINE MIR -52 156 111 665 263 148 31 chr10 1106744 1107196 -144482092 + MLT1D LTR MaLR 1 505 0 2453 84 7 0 chr10 1109426 1109735 -144479553 + AluSx SINE Alu 1 311 -1 236 262 0 0 chr10 1111965 1112026 -144477262 - MLT1J LTR MaLR -3 508 448 259 332 40 60 chr10 1112151 1112350 -144476938 - MLT1J LTR MaLR -60 451 257 406 238 90 0 chr10 1112625 1112747 -144476541 + LTR16C LTR ERVL 359 491 0 2409 65 7 3 chr10 1113251 1113541 -144475747 - AluSc SINE Alu -11 298 8 350 307 84 12 chr10 1115791 1115957 -144473331 + MIR SINE MIR 78 255 -7 453 246 48 0 chr10 1116143 1116269 -144473019 - L1MA6 LINE L1 0 6300 6169 230 156 11 113 chr10 1116275 1116461 -144472827 + (CAT)n Simple_repeat Simple_repeat 2 168 0 2256 189 90 63 chr10 1116826 1117446 -144471842 - L1MA6 LINE L1 -106 6194 5558 371 294 88 19 chr10 1117447 1117607 -144471681 - MIR3 SINE MIR -7 201 31 7590 19 14 0 chr10 1119776 1121259 -144468029 + L1PA2 LINE L1 4695 6174 0 7453 32 7 7 chr10 1121259 1122229 -144467059 + L1PA4 LINE L1 5177 6146 -9 1057 141 0 22 chr10 1123222 1123589 -144465699 + (CACCAT)n Simple_repeat Simple_repeat 1 360 0 2002 102 17 7 chr10 1124496 1124789 -144464499 - AluSq SINE Alu -17 296 1 190 276 86 60 chr10 1126412 1126528 -144462760 - MIR SINE MIR -80 182 64 324 230 27 14 chr10 1127088 1127236 -144462052 + (CA)n Simple_repeat Simple_repeat 1 150 0 338 268 27 18 chr10 1127258 1127370 -144461918 + (CA)n Simple_repeat Simple_repeat 1 113 0 320 245 132 19 chr10 1128422 1128528 -144460760 + L2 LINE L2 3180 3297 -16 1509 166 0 98 chr10 1129381 1129719 -144459569 - AluJb SINE Alu -7 305 1 2317 86 3 0 chr10 1130656 1130957 -144458331 + AluY SINE Alu 1 302 -9 2091 95 3 3 chr10 1132762 1133057 -144456231 - AluSc SINE Alu -14 295 1 1052 75 0 0 chr10 1133676 1133809 -144455479 + AluJb SINE Alu 7 139 -173 289 333 56 0 chr10 1140293 1140401 -144448887 + MIR SINE MIR 57 170 -92 198 0 0 0 chr10 1141356 1141378 -144447910 + (CAAAA)n Simple_repeat Simple_repeat 2 23 0 680 271 29 6 chr10 1141438 1141608 -144447680 - MER45A DNA AcHobo -4 174 1 226 227 0 0 chr10 1144447 1144491 -144444797 + T-rich Low_complexity Low_complexity 4 47 0 791 234 70 42 chr10 1146330 1146767 -144442521 - MLT1D LTR MaLR 0 467 5 207 311 78 0 chr10 1147697 1147787 -144441501 + MIR SINE MIR 17 113 -149 1963 91 39 11 chr10 1148535 1148821 -144440467 + AluY SINE Alu 1 294 -17 374 315 109 14 chr10 1149486 1149928 -144439360 - L1MEc LINE L1 -4656 1875 1236 1446 251 11 36 chr10 1149962 1150361 -144438927 + MLT2D LTR ERVL 1 533 -21 288 39 39 20 chr10 1150361 1150412 -144438876 + (TCTA)n Simple_repeat Simple_repeat 2 53 0 237 301 100 35 chr10 1150413 1150752 -144438536 - L1MEc LINE L1 -5014 1402 1042 192 40 0 0 chr10 1151255 1151280 -144438008 + (T)n Simple_repeat Simple_repeat 1 25 0 450 289 179 10 chr10 1151945 1152246 -144437042 + L2 LINE L2 2960 3311 -2 28 48 0 0 chr10 1152409 1152451 -144436837 + AT_rich Low_complexity Low_complexity 1 42 0 885 152 0 0 chr10 1152633 1152765 -144436523 - FLAM_C SINE Alu 0 133 2 273 245 0 0 chr10 1155477 1155530 -144433758 + (CGGG)n Simple_repeat Simple_repeat 4 56 0 883 141 0 22 chr10 1157972 1158107 -144431181 - AluJo/FLAM SINE Alu -170 132 1 415 149 0 103 chr10 1158107 1158205 -144431083 - AluJ/FRAM SINE Alu -7 305 217 * 825 158 0 22 chr10 1158203 1158342 -144430946 - AluJo SINE Alu -175 137 2 301 294 100 6 chr10 1159411 1159571 -144429717 - MER5B DNA MER1_type -3 175 1 707 224 38 6 chr10 1159682 1159865 -144429423 + MER5A DNA MER1_type 1 189 0 258 297 15 123 chr10 1160135 1160330 -144428958 + L1MC/D LINE L1 5611 5784 -2024 445 281 26 0 chr10 1161475 1161628 -144427660 + MLT1A1 LTR MaLR 153 309 -56 2098 88 7 3 chr10 1162929 1163212 -144426076 + AluSx SINE Alu 1 284 -28 327 234 105 16 chr10 1164106 1164230 -144425058 - MLT1C LTR MaLR -6 461 327 180 320 172 8 chr10 1164600 1164722 -144424566 - L2 LINE L2 -20 3252 3111 209 264 22 22 chr10 1165112 1165290 -144423998 + (CACCAT)n Simple_repeat Simple_repeat 1 178 0 288 260 14 14 chr10 1165414 1165560 -144423728 + (CACCAT)n Simple_repeat Simple_repeat 3 148 0 188 33 0 33 chr10 1166940 1166970 -144422318 + (TCCC)n Simple_repeat Simple_repeat 2 30 0 353 132 72 24 chr10 1167338 1167505 -144421783 + (CA)n Simple_repeat Simple_repeat 1 175 0 181 159 65 41 chr10 1167490 1167660 -144421628 + (CACAC)n Simple_repeat Simple_repeat 2 175 0 * 321 119 73 26 chr10 1167635 1167786 -144421502 + (CA)n Simple_repeat Simple_repeat 1 158 0 252 149 75 15 chr10 1167822 1167956 -144421332 + (CA)n Simple_repeat Simple_repeat 1 142 0 286 90 56 34 chr10 1168069 1168158 -144421130 + (TG)n Simple_repeat Simple_repeat 1 91 0 370 309 0 4 chr10 1170402 1170642 -144418646 + (CA)n Simple_repeat Simple_repeat 1 238 0 192 77 0 0 chr10 1172328 1172354 -144416934 + (CAT)n Simple_repeat Simple_repeat 1 26 0 22955 47 10 3 chr10 1172729 1175675 -144413613 + L1P LINE L1 1 2966 -3180 23967 34 4 1 chr10 1175775 1178810 -144410478 - L1P LINE L1 -1044 5102 2058 225 234 0 0 chr10 1178863 1178927 -144410361 + GA-rich Low_complexity Low_complexity 2 65 0 207 379 0 0 chr10 1182409 1182512 -144406776 - MER5A DNA MER1_type -3 186 84 258 274 52 44 chr10 1184526 1184661 -144404627 + L3b LINE CR1 1326 1461 -122 1491 180 20 108 chr10 1184991 1185391 -144403897 - MLT1A1 LTR MaLR 0 365 1 2815 133 17 2 chr10 1185452 1185920 -144403368 - L1MC1 LINE L1 -179 6154 5680 394 296 33 19 chr10 1185924 1186137 -144403151 - L1 LINE L1 -1127 5019 4804 1583 150 8 0 chr10 1186294 1186560 -144402728 - MSTB2 LTR MaLR 0 457 190 1072 180 57 12 chr10 1186556 1186801 -144402487 - MSTB2 LTR MaLR -201 256 1 * 487 330 59 33 chr10 1186847 1187307 -144401981 - L1 LINE L1 -1525 4621 4150 258 32 0 0 chr10 1187389 1187420 -144401868 + (TG)n Simple_repeat Simple_repeat 1 31 0 1742 171 0 7 chr10 1187586 1187879 -144401409 - AluJo SINE Alu -21 291 1 12042 25 7 2 chr10 1189527 1191697 -144397591 + L1PA4 LINE L1 3973 6146 -9 226 76 108 32 chr10 1193612 1193769 -144395519 + (TCTA)n Simple_repeat Simple_repeat 3 171 0 181 116 23 23 chr10 1193806 1193849 -144395439 + (TCTA)n Simple_repeat Simple_repeat 3 45 0 249 349 47 28 chr10 1193850 1193956 -144395332 - L2 LINE L2 -19 3253 3146 1276 216 103 25 chr10 1194045 1194443 -144394845 + MER63B DNA MER1_type 4 432 -4 456 161 0 72 chr10 1195584 1195777 -144393511 + (CAGAGA)n Simple_repeat Simple_repeat 2 180 0 376 309 72 59 chr10 1199757 1200061 -144389227 - MER58B DNA MER1_type -8 333 26 346 363 32 0 chr10 1200069 1200226 -144389062 + MIR SINE MIR 46 207 -55 2394 103 0 0 chr10 1200484 1200794 -144388494 - AluSx SINE Alu -2 310 1 376 309 72 59 chr10 1202441 1202745 -144386543 - MER58B DNA MER1_type -8 333 26 346 363 32 0 chr10 1202753 1202910 -144386378 + MIR SINE MIR 46 207 -55 853 203 98 0 chr10 1203168 1203331 -144385957 - AluJb SINE Alu -2 310 132 2962 200 80 7 chr10 1203331 1204217 -144385071 + L1MB3 LINE L1 5152 6100 -83 2116 125 0 55 chr10 1204714 1205041 -144384247 - AluSx SINE Alu -3 309 1 1691 176 0 14 chr10 1205189 1205484 -144383804 - AluJo SINE Alu -11 301 11 2285 112 13 0 chr10 1205490 1205795 -144383493 - AluSx SINE Alu -3 309 1 231 366 0 38 chr10 1207089 1207272 -144382016 + C-rich Low_complexity Low_complexity 4 179 0 1968 138 43 0 chr10 1208000 1208282 -144381006 + AluSx SINE Alu 1 294 -18 19095 49 2 4 chr10 1212337 1215530 -144373758 - L1PA4 LINE L1 -1 6154 2969 25462 32 6 3 chr10 1216239 1220130 -144369158 + L1PA4 LINE L1 2151 6052 -103 186 294 96 75 chr10 1221074 1221220 -144368068 + MIR SINE MIR 58 206 -56 421 317 45 40 chr10 1222736 1222960 -144366328 + HAL1 LINE L1 977 1201 -1306 304 308 81 5 chr10 1223168 1223389 -144365899 + HAL1 LINE L1 1512 1749 -758 186 294 96 75 chr10 1224995 1225141 -144364147 + MIR SINE MIR 58 206 -56 421 317 45 40 chr10 1226793 1227017 -144362271 + HAL1 LINE L1 977 1201 -1306 304 308 81 5 chr10 1227225 1227446 -144361842 + HAL1 LINE L1 1512 1749 -758 268 255 179 33 chr10 1228160 1228372 -144360916 + HAL1 LINE L1 2265 2507 0 213 240 40 0 chr10 1229106 1229156 -144360132 + C-rich Low_complexity Low_complexity 1 52 0 317 295 67 0 chr10 1229332 1229437 -144359851 + L2 LINE L2 3184 3295 -18 667 293 29 3 chr10 1229448 1229652 -144359636 - MIR SINE MIR 0 262 55 285 211 18 26 chr10 1231563 1231677 -144357611 + (CA)n Simple_repeat Simple_repeat 1 113 0 474 296 107 26 chr10 1231861 1232094 -144357194 + MIR SINE MIR 7 258 -4 619 249 107 29 chr10 1232809 1233160 -144356128 - MLT1C LTR MaLR -7 460 89 939 203 0 0 chr10 1233275 1233438 -144355850 - FRAM SINE Alu -3 163 1 228 228 20 119 chr10 1234015 1234116 -144355172 - L2 LINE L2 -188 3084 2994 7616 33 48 3 chr10 1235521 1236584 -144352704 - L1PA4 LINE L1 -1 6154 5077 10604 40 2 0 chr10 1236584 1237942 -144351346 + L1P LINE L1 2453 3813 -2333 189 0 0 0 chr10 1237946 1237967 -144351321 + (TTCC)n Simple_repeat Simple_repeat 1 21 0 2118 124 0 34 chr10 1237971 1238294 -144350994 - AluSx SINE Alu 0 312 1 1575 127 137 13 chr10 1238307 1238621 -144350667 - L1PA16 LINE L1 0 6166 5814 742 238 25 20 chr10 1239080 1239282 -144350006 - MLT1B LTR MaLR 0 390 188 1783 168 7 7 chr10 1239318 1239629 -144349659 - AluJo SINE Alu 0 311 1 232 235 12 49 chr10 1239631 1239712 -144349576 - MLT1B LTR MaLR -207 167 90 1362 242 3 20 chr10 1239716 1240059 -144349229 + MLT1C-int LTR MaLR 1399 1735 0 763 205 6 23 chr10 1240118 1240289 -144348999 - MLT1A2 LTR MaLR -202 172 5 281 324 9 9 chr10 1243308 1243419 -144345869 - MIR SINE MIR -15 247 137 327 283 35 18 chr10 1244102 1244215 -144345073 - L2 LINE L2 0 3313 3199 270 318 83 23 chr10 1244554 1244686 -144344602 - MIR SINE MIR -64 198 59 220 359 58 26 chr10 1246579 1246735 -144342553 + MIR SINE MIR 6 166 -96 1369 224 99 0 chr10 1247271 1247584 -144341704 - L1MA7 LINE L1 0 6291 5948 491 370 34 13 chr10 1248361 1248596 -144340692 - MIR SINE MIR 0 262 23 3995 112 32 2 chr10 1248883 1249474 -144339814 + MER4B LTR ERV1 1 609 -1 242 347 13 73 chr10 1250448 1250598 -144338690 - MIR SINE MIR -115 147 7 721 132 0 16 chr10 1252163 1252284 -144337004 - FLAM_C SINE Alu -24 119 1 597 187 18 26 chr10 1252962 1253188 -144336100 + GA-rich Low_complexity Low_complexity 1 224 0 639 163 22 22 chr10 1253358 1253536 -144335752 + GA-rich Low_complexity Low_complexity 3 180 0 364 298 60 12 chr10 1254983 1255151 -144334137 + MER5B DNA MER1_type 3 178 0 418 228 94 58 chr10 1257214 1257385 -144331903 + MLT1C LTR MaLR 6 182 -285 1259 234 88 38 chr10 1257447 1257922 -144331366 + LTR55 LTR ERV 34 532 -16 461 260 56 5 chr10 1257932 1258176 -144331112 + MLT1C LTR MaLR 192 373 -17 787 270 40 40 chr10 1258886 1259186 -144330102 - AluSq SINE Alu 0 313 14 241 261 26 17 chr10 1259336 1259451 -144329837 + LTR55 LTR ERV 408 523 -25 413 266 59 5 chr10 1259470 1259713 -144329575 + MLT1C LTR MaLR 192 373 -17 1878 142 46 16 chr10 1260417 1260720 -144328568 - AluJb SINE Alu 0 312 1 353 230 74 14 chr10 1261217 1261365 -144327923 + MER76 LTR ERV 15 171 -517 196 222 0 0 chr10 1262236 1262272 -144327016 - L2 LINE L2 -1 3271 3236 222 174 0 0 chr10 1263233 1263279 -144326009 + CT-rich Low_complexity Low_complexity 3 48 0 1035 190 113 12 chr10 1263441 1263688 -144325600 - L1MC1 LINE L1 0 6333 6062 41066 34 23 10 chr10 1263691 1269767 -144319521 + L1PA2 LINE L1 3 6154 -1 3141 170 66 2 chr10 1269780 1270398 -144318890 - L1MC1 LINE L1 -261 6072 5415 244 305 12 12 chr10 1271794 1271876 -144317412 - L2 LINE L2 0 3313 3232 229 292 15 0 chr10 1272227 1272292 -144316996 - L2 LINE L2 -4 3309 3244 259 268 12 49 chr10 1272783 1272865 -144316423 + MIR SINE MIR 40 118 -90 310 310 86 0 chr10 1274291 1274443 -144314845 - MIR SINE MIR -68 140 17 267 93 0 0 chr10 1276118 1276161 -144313127 + (TCC)n Simple_repeat Simple_repeat 3 45 0 22 0 0 0 chr10 1278917 1278939 -144310349 + AT_rich Low_complexity Low_complexity 1 22 0 409 238 74 25 chr10 1281518 1281700 -144307588 - L1P5 LINE L1 -460 5661 5496 1764 165 7 14 chr10 1283061 1283358 -144305930 - AluJo SINE Alu -11 301 7 207 231 0 58 chr10 1283566 1283618 -144305670 + G-rich Low_complexity Low_complexity 1 49 0 3392 253 85 17 chr10 1284915 1286724 -144302564 + L1MD2 LINE L1 4410 6349 -10 224 237 17 0 chr10 1288273 1288332 -144300956 + GA-rich Low_complexity Low_complexity 1 60 0 1844 173 3 22 chr10 1290694 1291007 -144298281 + AluJb SINE Alu 1 307 -5 219 69 0 0 chr10 1291915 1291944 -144297344 + (T)n Simple_repeat Simple_repeat 1 29 0 590 259 11 52 chr10 1292438 1292612 -144296676 + L1MB7 LINE L1 3969 4135 -2011 3160 195 69 42 chr10 1292623 1293744 -144295544 + L1MB7 LINE L1 5032 6184 0 1737 189 3 40 chr10 1294106 1294429 -144294859 + AluJb SINE Alu 2 312 0 182 178 111 0 chr10 1294646 1294691 -144294597 + L3 LINE CR1 1525 1574 -3 220 307 207 27 chr10 1295310 1295460 -144293828 - MIR SINE MIR -84 178 2 231 253 25 13 chr10 1296444 1296523 -144292765 + (TATATG)n Simple_repeat Simple_repeat 4 83 0 202 310 129 9 chr10 1296923 1297039 -144292249 - MER5A DNA MER1_type -3 186 57 206 239 124 71 chr10 1297080 1297193 -144292095 + L2 LINE L2 3154 3272 0 477 250 0 10 chr10 1297193 1297486 -144291802 + GA-rich Low_complexity Low_complexity 1 290 0 222 194 0 0 chr10 1297489 1297556 -144291732 + (TGGA)n Simple_repeat Simple_repeat 3 69 0 279 0 0 0 chr10 1299046 1299077 -144290211 + (TG)n Simple_repeat Simple_repeat 2 32 0 5361 126 6 14 chr10 1305200 1306064 -144283224 + L1PA15 LINE L1 5303 6159 -6 204 226 19 0 chr10 1309093 1309146 -144280142 - MIR SINE MIR -62 146 93 252 314 65 59 chr10 1309352 1309521 -144279767 - MIR SINE MIR -34 228 59 611 125 45 28 chr10 1309914 1310090 -144279198 + (CAGAGA)n Simple_repeat Simple_repeat 1 179 0 5875 97 11 13 chr10 1310666 1312405 -144276883 + HERVH LTR ERV1 2091 3993 -3720 1228 117 0 0 chr10 1312407 1312587 -144276701 + HERVH LTR ERV1 4488 4667 -3046 * 5343 90 52 0 chr10 1312583 1313397 -144275891 + HERVH LTR ERV1 5769 6624 -1089 1423 85 77 20 chr10 1313398 1313645 -144275643 + HERVH LTR ERV1 7453 7713 0 1843 110 34 8 chr10 1313645 1313995 -144275293 + LTR7 LTR ERV1 1 448 -2 290 337 177 23 chr10 1314800 1314975 -144274313 + MIR SINE MIR 59 260 -2 317 231 45 26 chr10 1315275 1315431 -144273857 + (TA)n Simple_repeat Simple_repeat 2 160 0 283 216 14 0 chr10 1316915 1316989 -144272299 - MER53 DNA DNA -7 182 108 199 196 22 0 chr10 1317263 1317309 -144271979 - MIR SINE MIR -125 137 91 252 231 0 0 chr10 1317464 1317516 -144271772 + GA-rich Low_complexity Low_complexity 1 52 0 228 297 187 13 chr10 1319201 1319356 -144269932 + MER5A DNA MER1_type 1 182 -7 200 291 0 0 chr10 1321250 1321305 -144267983 - MIR SINE MIR -4 258 204 1611 119 125 32 chr10 1321503 1321846 -144267442 + MER51B LTR ERV1 2 376 -1 21 57 0 0 chr10 1322702 1322737 -144266551 + GC_rich Low_complexity Low_complexity 1 35 0 25 75 0 0 chr10 1322792 1322845 -144266443 + GC_rich Low_complexity Low_complexity 1 53 0 22 0 0 0 chr10 1322901 1322923 -144266365 + GC_rich Low_complexity Low_complexity 1 22 0 34 55 0 0 chr10 1323240 1323295 -144265993 + GC_rich Low_complexity Low_complexity 1 55 0 1090 185 33 0 chr10 1323941 1324152 -144265136 - MER2 DNA MER2_type 0 345 128 2251 179 69 26 chr10 1324161 1324294 -144264994 + Tigger1 DNA MER2_type 29 155 -2263 2337 97 3 0 chr10 1324294 1324592 -144264696 - AluSx SINE Alu -13 299 1 2251 179 69 26 chr10 1324592 1324962 -144264326 + Tigger1 DNA MER2_type 155 554 -1864 423 348 55 24 chr10 1325014 1325464 -144263824 + L1ME3 LINE L1 5458 5929 -249 206 385 43 17 chr10 1327604 1327721 -144261567 + MIR SINE MIR 82 201 -61 384 224 95 0 chr10 1329072 1329188 -144260100 + L1MA9 LINE L1 6148 6274 -38 7563 186 21 11 chr10 1329608 1331014 -144258274 + L1PB4 LINE L1 3758 5201 -955 195 42 0 0 chr10 1331014 1331038 -144258250 + (TAAAA)n Simple_repeat Simple_repeat 2 25 0 7563 186 21 11 chr10 1331038 1332001 -144257287 + L1PB4 LINE L1 5201 6153 -3 1260 193 30 10 chr10 1332463 1332758 -144256530 + L1MA9 LINE L1 4424 4724 -1422 340 136 23 23 chr10 1332761 1332849 -144256439 + (TCTCTG)n Simple_repeat Simple_repeat 1 88 0 258 56 0 0 chr10 1332849 1332885 -144256403 + (CA)n Simple_repeat Simple_repeat 2 37 0 208 225 11 11 chr10 1333051 1333140 -144256148 + (TG)n Simple_repeat Simple_repeat 2 90 0 524 167 24 8 chr10 1335281 1335407 -144253881 + (CA)n Simple_repeat Simple_repeat 1 128 0 490 189 22 22 chr10 1335460 1335640 -144253648 + (CA)n Simple_repeat Simple_repeat 1 180 0 419 235 40 21 chr10 1336512 1336844 -144252444 + (TG)n Simple_repeat Simple_repeat 1 338 0 363 307 28 6 chr10 1336878 1337054 -144252234 + (TG)n Simple_repeat Simple_repeat 1 180 0 305 420 0 0 chr10 1338111 1338285 -144251003 + G-rich Low_complexity Low_complexity 5 178 0 490 205 8 8 chr10 1340573 1340690 -144248598 + MER53 DNA DNA 3 119 -70 2521 225 59 33 chr10 1340773 1341691 -144247597 + L1MA9 LINE L1 5325 6312 0 269 136 0 0 chr10 1341704 1341748 -144247540 + MER53 DNA DNA 146 189 0 813 281 92 82 chr10 1344058 1345455 -144243833 + L1ME2 LINE L1 92 1502 -4894 6762 258 66 52 chr10 1345486 1349065 -144240223 + L1ME2 LINE L1 1849 5451 -764 1374 145 0 14 chr10 1349072 1349324 -144239964 + AluSq SINE Alu 82 330 0 1580 258 58 41 chr10 1349404 1349993 -144239295 + L1ME2 LINE L1 5634 6232 -1 2034 149 30 0 chr10 1351290 1351591 -144237697 - AluJb SINE Alu -2 310 1 602 175 18 0 chr10 1352366 1352480 -144236808 + MLT1B LTR MaLR 1 116 -274 1790 108 14 11 chr10 1352747 1353033 -144236255 - L1MA2 LINE L1 0 6304 6018 198 0 0 0 chr10 1354399 1354421 -144234867 + (TTTTC)n Simple_repeat Simple_repeat 4 25 0 1223 173 154 0 chr10 1354446 1354706 -144234582 - AluJo SINE Alu -2 300 1 220 255 0 0 chr10 1355958 1356005 -144233283 - L2 LINE L2 0 3272 3226 224 328 15 0 chr10 1358671 1358738 -144230550 + L2 LINE L2 3205 3272 0 310 289 78 49 chr10 1361579 1361721 -144227567 + MER103 DNA DNA 21 166 0 463 220 119 0 chr10 1362496 1362605 -144226683 - MER45A DNA AcHobo -7 171 50 1668 100 21 17 chr10 1365105 1365344 -144223944 + AluSq SINE Alu 66 305 -8 26 50 0 0 chr10 1367641 1367681 -144221607 + AT_rich Low_complexity Low_complexity 1 40 0 357 326 8 0 chr10 1368094 1368226 -144221062 - L1ME LINE L1 -400 5721 5589 24 0 0 0 chr10 1371927 1371951 -144217337 + AT_rich Low_complexity Low_complexity 1 24 0 21 0 0 0 chr10 1371996 1372017 -144217271 + AT_rich Low_complexity Low_complexity 1 21 0 322 262 65 9 chr10 1372316 1372423 -144216865 + MIR SINE MIR 88 200 -62 4128 81 41 3 chr10 1373774 1374357 -144214931 + LTR14B LTR ERVK 4 608 0 674 167 35 4 chr10 1374359 1374590 -144214698 + (TGGA)n Simple_repeat Simple_repeat 1 238 0 589 180 30 0 chr10 1374611 1374778 -144214510 + (TGGA)n Simple_repeat Simple_repeat 4 175 0 513 199 19 0 chr10 1374868 1375024 -144214264 + (TGGA)n Simple_repeat Simple_repeat 4 162 0 31 0 0 0 chr10 1375234 1375265 -144214023 + AT_rich Low_complexity Low_complexity 1 31 0 225 369 92 0 chr10 1375467 1375597 -144213691 + MIR SINE MIR 46 187 -75 209 275 12 25 chr10 1375714 1375794 -144213494 + (CATATA)n Simple_repeat Simple_repeat 6 84 0 275 280 105 83 chr10 1376953 1377177 -144212111 - MIR SINE MIR -13 249 21 1808 84 0 8 chr10 1378641 1378879 -144210409 - AluSq SINE Alu -12 301 66 537 263 25 0 chr10 1381057 1381175 -144208113 - L2 LINE L2 0 3313 3193 184 250 0 21 chr10 1384941 1384989 -144204299 + L2 LINE L2 3267 3313 0 4467 197 29 24 chr10 1386625 1387514 -144201774 + L1MD2 LINE L1 4822 5704 -655 2049 116 0 26 chr10 1387514 1387817 -144201471 - AluSx SINE Alu -14 298 4 4467 197 29 24 chr10 1387817 1387840 -144201448 + L1MD2 LINE L1 5704 5725 -634 2241 78 7 3 chr10 1387840 1388133 -144201155 - AluY SINE Alu -17 294 1 4467 197 29 24 chr10 1388133 1388376 -144200912 + L1MD2 LINE L1 5725 6151 -208 264 137 0 0 chr10 1388376 1388427 -144200861 + (CA)n Simple_repeat Simple_repeat 1 51 0 293 226 24 24 chr10 1388431 1388515 -144200773 + L1MD2 LINE L1 6135 6218 -141 581 263 58 0 chr10 1388597 1388768 -144200520 + L1MD2 LINE L1 6176 6356 -3 189 203 14 27 chr10 1389376 1389450 -144199838 + CT-rich Low_complexity Low_complexity 1 73 0 1247 238 55 43 chr10 1389450 1390110 -144199178 + L1MDa LINE L1 1963 2730 -3893 1138 118 0 18 chr10 1390129 1390298 -144198990 + AluSg/x SINE Alu 129 294 -18 3278 227 45 52 chr10 1390301 1391514 -144197774 + L1MDa LINE L1 2720 3923 -2617 243 0 0 0 chr10 1391729 1391756 -144197532 + (TGAA)n Simple_repeat Simple_repeat 1 27 0 2987 86 17 2 chr10 1393935 1394539 -144194749 + PABL_A LTR ERV1 1 660 0 221 194 0 16 chr10 1395652 1395714 -144193574 + (TG)n Simple_repeat Simple_repeat 2 62 0 284 202 0 48 chr10 1396780 1396864 -144192424 - L1MC4 LINE L1 -1339 6703 6624 187 273 57 45 chr10 1399804 1399892 -144189396 + MIR SINE MIR 23 111 -151 205 228 38 63 chr10 1401057 1401136 -144188152 - MIR SINE MIR -38 224 148 225 235 43 61 chr10 1401279 1401394 -144187894 - MIR SINE MIR -54 208 96 1042 224 103 24 chr10 1451682 1452012 -144137276 + MLT1A2 LTR MaLR 19 374 0 894 144 7 0 chr10 1452274 1452413 -144136875 + L1P LINE L1 4882 5021 -1125 269 270 95 40 chr10 1453078 1453204 -144136084 - MIR SINE MIR -71 191 59 10548 37 2 0 chr10 1453833 1455114 -144134174 - L1P LINE L1 -2361 3785 2503 194 326 90 35 chr10 1455214 1455314 -144133974 + MIR SINE MIR 107 219 -43 2254 118 0 0 chr10 1455314 1455619 -144133669 + AluSx SINE Alu 1 305 -7 194 326 90 35 chr10 1455619 1455662 -144133626 + MIR SINE MIR 219 258 -4 1062 203 50 5 chr10 1456364 1456586 -144132702 + L1PA15-16 LINE L1 1453 1684 -5165 254 176 132 0 chr10 1456588 1456656 -144132632 + polypurine Low_complexity Low_complexity 3 79 0 4423 134 31 15 chr10 1456656 1457437 -144131851 + L1PA15-16 LINE L1 1617 2409 -4440 2646 221 20 11 chr10 1457537 1458270 -144131018 + L1 LINE L1 3506 4245 -2604 31 0 0 0 chr10 1459982 1460013 -144129275 + AT_rich Low_complexity Low_complexity 1 31 0 205 296 0 0 chr10 1460140 1460184 -144129104 - L2 LINE L2 -8 3305 3262 197 211 96 19 chr10 1460148 1460200 -144129088 - MIR SINE MIR -10 252 197 * 257 189 176 0 chr10 1460371 1460445 -144128843 + MLT1J LTR MaLR 419 505 -6 447 137 0 27 chr10 1461048 1461121 -144128167 - 5S rRNA rRNA -20 101 31 384 265 17 87 chr10 1461628 1461858 -144127430 - L1ME4a LINE L1 -12 6109 5896 987 176 18 0 chr10 1463001 1463166 -144126122 + MER68 LTR ERV1 395 562 0 461 323 5 5 chr10 1463275 1463473 -144125815 + L1M3 LINE L1 2703 2900 -3246 277 167 0 0 chr10 1463476 1463518 -144125770 - Tigger5 DNA MER2_type 0 2323 2282 * 309 237 17 0 chr10 1463516 1463575 -144125713 + Tigger5 DNA MER2_type 2259 2318 -5 265 182 227 30 chr10 1463575 1463641 -144125647 - Tigger5 DNA MER2_type -2243 80 2 344 178 0 0 chr10 1463643 1463716 -144125572 + L1M3 LINE L1 2904 2976 -3170 226 211 0 39 chr10 1463718 1463770 -144125518 + L1M4 LINE L1 435 484 -6091 443 250 91 40 chr10 1463800 1463976 -144125312 + L1M3d LINE L1 64 248 -6294 1333 222 64 12 chr10 1464141 1464479 -144124809 + L1M3 LINE L1 5231 5580 -600 22 0 0 0 chr10 1466011 1466033 -144123255 + AT_rich Low_complexity Low_complexity 1 22 0 480 331 6 0 chr10 1466310 1466488 -144122800 + (CA)n Simple_repeat Simple_repeat 2 180 0 180 77 0 0 chr10 1467099 1467125 -144122163 + (CCA)n Simple_repeat Simple_repeat 3 28 0 282 238 16 0 chr10 1468469 1468532 -144120756 + L1M3d LINE L1 238 301 -6343 2430 92 0 0 chr10 1468699 1469004 -144120284 - AluSx SINE Alu -7 305 1 3947 144 58 5 chr10 1469257 1469909 -144119379 + L1PA16 LINE L1 5470 6156 -10 534 201 10 10 chr10 1470674 1470969 -144118319 + (TG)n Simple_repeat Simple_repeat 1 295 0 189 147 0 0 chr10 1472115 1472149 -144117139 + (TC)n Simple_repeat Simple_repeat 1 34 0 213 193 18 18 chr10 1472708 1472765 -144116523 + (TA)n Simple_repeat Simple_repeat 2 58 0 359 330 54 15 chr10 1474098 1474301 -144114987 + L1M3d LINE L1 652 862 -5772 358 237 26 105 chr10 1474548 1474700 -144114588 + L1M4 LINE L1 2088 2227 -4598 219 36 0 0 chr10 1474723 1474751 -144114537 + (TG)n Simple_repeat Simple_repeat 2 29 0 * 342 0 0 0 chr10 1474750 1474788 -144114500 + (TA)n Simple_repeat Simple_repeat 1 38 0 337 291 63 63 chr10 1475050 1475256 -144114032 + L1M3d LINE L1 881 1086 -5479 1857 231 160 45 chr10 1475384 1476184 -144113104 + L1M4c LINE L1 542 1794 -4519 3620 244 33 11 chr10 1476284 1477331 -144111957 + L1P LINE L1 2639 3708 -2438 8574 78 13 0 chr10 1477431 1478567 -144110721 - L1P LINE L1 -4660 1486 336 1754 176 65 40 chr10 1478667 1479037 -144110251 + L1MC1 LINE L1 5950 6328 -5 630 152 27 0 chr10 1479042 1479154 -144110134 + L1MB7 LINE L1 6051 6165 -19 2935 150 44 22 chr10 1479174 1479501 -144109787 - L1MD2 LINE L1 -423 5936 5591 1691 160 35 11 chr10 1479501 1479788 -144109500 - AluJo SINE Alu -18 294 1 2935 150 44 22 chr10 1479788 1480008 -144109280 - L1MD2 LINE L1 -768 5591 5377 518 224 33 33 chr10 1480018 1480170 -144109118 + L1MC5 LINE L1 7314 7465 -496 5808 167 40 3 chr10 1480300 1481432 -144107856 - L1PBa LINE L1 -4453 2410 1093 2800 184 71 17 chr10 1481433 1482025 -144107263 - L1PBa LINE L1 -5815 1048 425 21 36 0 0 chr10 1482300 1482328 -144106960 + AT_rich Low_complexity Low_complexity 1 28 0 5839 163 38 10 chr10 1483820 1485046 -144104242 + L1PA12 LINE L1 225 2004 -5577 999 159 12 0 chr10 1485044 1485207 -144104081 + L1PA13 LINE L1 339 503 -6284 * 21 36 0 0 chr10 1485467 1485495 -144103793 + AT_rich Low_complexity Low_complexity 1 28 0 210 315 0 14 chr10 1485768 1485841 -144103447 + (CATATA)n Simple_repeat Simple_repeat 5 76 0 247 191 0 0 chr10 1486290 1486332 -144102956 + MIR SINE MIR 111 152 -56 1290 139 43 9 chr10 1487143 1487373 -144101915 + MLT1B LTR MaLR 151 388 -2 22 56 0 0 chr10 1487616 1487652 -144101636 + AT_rich Low_complexity Low_complexity 1 36 0 2324 88 16 0 chr10 1490168 1490473 -144098815 + AluSg SINE Alu 1 310 0 4395 183 44 35 chr10 1491859 1492903 -144096385 - L1 LINE L1 -1279 5049 3997 1477 234 61 16 chr10 1493009 1493454 -144095834 - L1ME2 LINE L1 -142 6022 5558 2954 137 41 2 chr10 1493456 1493939 -144095349 - L1PA16 LINE L1 -3 6163 5662 2195 124 0 3 chr10 1493958 1494264 -144095024 - AluSx SINE Alu -7 305 1 906 287 123 21 chr10 1494265 1495150 -144094138 - L1ME2 LINE L1 -1890 4256 3261 5318 184 23 32 chr10 1495268 1496786 -144092502 - L1 LINE L1 -4296 2032 3 186 224 0 0 chr10 1497133 1497182 -144092106 + (TG)n Simple_repeat Simple_repeat 2 50 0 356 327 92 0 chr10 1497356 1497509 -144091779 - MIR SINE MIR -66 196 30 258 241 74 37 chr10 1497578 1497686 -144091602 - L1MA10 LINE L1 0 6334 6223 936 187 7 1 chr10 1497735 1497920 -144091368 - L1ME1 LINE L1 -290 5882 5693 4680 164 38 14 chr10 1497921 1498952 -144090336 + L1MB2 LINE L1 5105 6164 -7 247 169 0 123 chr10 1498957 1499022 -144090266 + L1ME3A LINE L1 5962 6018 -152 418 93 0 0 chr10 1499596 1499650 -144089638 - Alu SINE Alu -250 60 7 463 186 44 18 chr10 1500111 1500224 -144089064 + MER4C LTR ERV1 4 119 -346 226 224 0 0 chr10 1500289 1500338 -144088950 + MER4A LTR ERV1 136 184 -480 399 217 59 129 chr10 1500370 1500758 -144088530 + MER4A LTR ERV1 189 656 -43 4763 187 5 32 chr10 1501378 1502572 -144086716 + L1P4 LINE L1 4316 5472 -694 442 319 44 28 chr10 1502567 1503180 -144086108 + L1ME LINE L1 4934 5557 -605 * 268 206 124 84 chr10 1504653 1504795 -144084493 - MLT1L LTR MaLR -304 207 49 1073 229 47 0 chr10 1504795 1505009 -144084279 - MER58A DNA MER1_type 0 224 1 268 206 124 84 chr10 1505009 1505058 -144084230 - MLT1L LTR MaLR -462 49 3 1902 76 4 0 chr10 1509397 1509647 -144079641 - L1PA8 LINE L1 -3 6169 5919 8273 163 11 12 chr10 1509747 1510761 -144078527 - L1P LINE L1 -1953 4193 3179 2352 93 6 6 chr10 1510761 1511072 -144078216 - AluY SINE Alu 0 311 1 8273 163 11 12 chr10 1511072 1511538 -144077750 - L1P LINE L1 -2967 3179 2714 1764 117 0 0 chr10 1511537 1511776 -144077512 + L1P LINE L1 1 239 -5907 * 312 250 77 0 chr10 1511877 1511981 -144077307 - LTR43 LTR ERV1 -479 123 12 475 329 103 16 chr10 1512071 1512518 -144076770 - L1ME1 LINE L1 -4 6162 5677 849 245 24 21 chr10 1512860 1513223 -144076065 - L1ME1 LINE L1 -782 5364 5155 251 106 0 21 chr10 1513622 1513669 -144075619 + Alu SINE Alu 263 308 0 5307 141 12 15 chr10 1513669 1514538 -144074750 + L1PA15 LINE L1 5297 6165 0 905 240 115 13 chr10 1514549 1514861 -144074427 - L1ME1 LINE L1 -3600 2546 2203 3392 240 80 21 chr10 1514972 1516197 -144073091 - L1 LINE L1 -2550 3596 2300 1801 163 38 20 chr10 1516198 1516542 -144072746 + MER65A LTR ERV1 1 350 -95 3249 123 7 2 chr10 1516544 1517007 -144072281 + HSMAR1 DNA Mariner 27 491 -796 265 345 18 9 chr10 1517107 1517220 -144072068 - L2 LINE L2 -20 3293 3180 238 313 56 56 chr10 1518286 1518430 -144070858 - MIR SINE MIR -72 190 47 252 257 68 0 chr10 1518788 1518862 -144070426 + L1MA9 LINE L1 6057 6135 -177 786 207 112 90 chr10 1524266 1524623 -144064665 - MLT1A1 LTR MaLR 0 365 1 7176 220 113 9 chr10 1524938 1527028 -144062260 - L1PA13 LINE L1 -3979 2818 499 760 100 0 0 chr10 1527028 1527128 -144062160 + THE1C LTR MaLR 1 100 -275 7205 176 31 11 chr10 1527603 1529825 -144059463 - L1PA14 LINE L1 0 6161 3898 225 0 0 0 chr10 1530665 1530690 -144058598 + (CAAA)n Simple_repeat Simple_repeat 3 27 0 561 167 0 0 chr10 1531512 1531614 -144057674 + (TCCA)n Simple_repeat Simple_repeat 4 105 0 8605 204 61 16 chr10 1531720 1533238 -144056050 + L1M1 LINE L1 3344 4793 -2772 659 232 8 0 chr10 1533238 1533363 -144055925 + FLAM_A SINE Alu 2 127 -6 8605 204 61 16 chr10 1533363 1534665 -144054623 + L1M1 LINE L1 4793 6418 -1147 792 77 19 0 chr10 1534661 1534765 -144054523 + L1PA12 LINE L1 1 106 -7475 * 279 29 0 0 chr10 1534765 1534800 -144054488 - MADE1 DNA Mariner -34 46 12 246 215 115 110 chr10 1535258 1535449 -144053839 - MLT1J LTR MaLR -112 399 208 5617 205 137 49 chr10 1535455 1537320 -144051968 - L1MCa LINE L1 -4392 2034 6 382 216 11 0 chr10 1537298 1537386 -144051902 - L1M LINE L1 -766 5688 5600 * 2410 150 50 43 chr10 1537486 1538165 -144051123 - L1M4 LINE L1 -401 5777 5091 977 226 35 42 chr10 1538445 1538732 -144050556 - L1ME1 LINE L1 -18 6148 5864 2096 148 77 0 chr10 1538738 1539076 -144050212 + THE1B LTR MaLR 1 364 0 4990 90 3 1 chr10 1539076 1539740 -144049548 + THE1B-int LTR MaLR 1 665 -915 362 73 0 0 chr10 1539721 1539776 -144049512 + THE1B-int LTR MaLR 1521 1575 -5 * 247 292 109 58 chr10 1539894 1540031 -144049257 + L2 LINE L2 3128 3271 -1 191 311 49 0 chr10 1541243 1541304 -144047984 + L2 LINE L2 3201 3264 -8 299 380 0 0 chr10 1542347 1542476 -144046812 + (TGAG)n Simple_repeat Simple_repeat 4 132 0 1574 170 71 3 chr10 1544649 1544972 -144044316 - MLT1B LTR MaLR -38 352 8 21 36 0 0 chr10 1545445 1545473 -144043815 + AT_rich Low_complexity Low_complexity 1 28 0 304 271 157 52 chr10 1546785 1546995 -144042293 - L1M2 LINE L1 -5598 1251 1020 12610 34 3 2 chr10 1548441 1550648 -144038640 + L1PA4 LINE L1 3880 6090 -65 641 136 14 27 chr10 1550761 1550908 -144038380 + (TCCA)n Simple_repeat Simple_repeat 2 146 0 765 157 11 11 chr10 1550950 1551128 -144038160 + (TCCA)n Simple_repeat Simple_repeat 3 180 0 295 252 0 103 chr10 1551765 1551872 -144037416 + MIR SINE MIR 89 184 -78 407 329 110 0 chr10 1551982 1552128 -144037160 - MIR SINE MIR -57 205 44 398 295 53 27 chr10 1552153 1552393 -144036895 + MIR SINE MIR 12 256 -6 337 301 39 0 chr10 1552858 1552961 -144036327 + MIR SINE MIR 88 194 -68 1154 163 15 0 chr10 1553165 1553368 -144035920 - L1PA15 LINE L1 -7 6158 5953 1686 162 14 0 chr10 1553469 1553753 -144035535 - MSTA LTR MaLR -140 288 1 994 162 81 0 chr10 1553916 1554113 -144035175 + AluJb SINE Alu 55 267 -45 318 286 109 8 chr10 1555846 1555965 -144033323 - MER5A DNA MER1_type -52 137 7 2070 126 0 0 chr10 1556174 1556475 -144032813 + AluSg SINE Alu 1 301 -9 5013 181 15 30 chr10 1557986 1558010 -144031278 - L1MC1 LINE L1 -6 6327 6304 3301 110 31 90 chr10 1558010 1558157 -144031131 - MER4A LTR ERV1 0 600 446 2201 75 0 0 chr10 1558157 1558462 -144030826 - AluY SINE Alu 0 307 3 3301 110 31 90 chr10 1558462 1558948 -144030340 - MER4A LTR ERV1 -154 446 3 5013 181 15 30 chr10 1558948 1559948 -144029340 - L1MC1 LINE L1 -29 6304 5319 892 264 70 98 chr10 1561175 1561717 -144027571 + MER77 LTR ERV1 79 605 0 419 210 10 0 chr10 1562253 1562353 -144026935 + CT-rich Low_complexity Low_complexity 1 101 0 270 284 0 34 chr10 1563068 1563156 -144026132 - L2 LINE L2 -3 3269 3185 209 57 29 0 chr10 1564774 1564809 -144024479 + (TTTG)n Simple_repeat Simple_repeat 2 37 0 1174 22 0 0 chr10 1566165 1566299 -144022989 + L1PA3 LINE L1 6022 6155 0 311 233 89 22 chr10 1567158 1567248 -144022040 - MIR SINE MIR -131 131 36 250 246 72 14 chr10 1567310 1567379 -144021909 - L2 LINE L2 -16 3297 3225 279 319 11 33 chr10 1568411 1568502 -144020786 + L2 LINE L2 3221 3309 -4 849 254 90 3 chr10 1568634 1568922 -144020366 + MER33 DNA MER1_type 9 321 -3 189 0 0 0 chr10 1570857 1570878 -144018410 + (TTTG)n Simple_repeat Simple_repeat 2 22 0 267 224 149 0 chr10 1571960 1572027 -144017261 + Charlie8 DNA MER1_type 118 194 -2223 465 110 0 0 chr10 1572538 1572611 -144016677 + (CA)n Simple_repeat Simple_repeat 2 74 0 202 397 127 15 chr10 1573271 1573545 -144015743 - L2 LINE L2 0 3272 2937 1642 194 0 19 chr10 1573545 1573860 -144015428 - AluJb SINE Alu -3 309 1 202 397 127 15 chr10 1573860 1573988 -144015300 - L2 LINE L2 -335 2937 2825 7242 114 67 8 chr10 1574943 1576105 -144013183 - Tigger3b DNA MER2_type 0 1231 1 617 258 30 6 chr10 1576785 1576952 -144012336 + MER3 DNA MER1_type 35 205 -4 304 200 55 0 chr10 1578700 1578810 -144010478 + (CTGTG)n Simple_repeat Simple_repeat 4 119 0 246 261 15 0 chr10 1580136 1580201 -144009087 + L2 LINE L2 3247 3312 -1 296 320 137 23 chr10 1581347 1581522 -144007766 + MIR3 SINE MIR 6 200 -8 21 57 0 0 chr10 1582216 1582251 -144007037 + AT_rich Low_complexity Low_complexity 1 35 0 198 71 0 0 chr10 1583311 1583339 -144005949 + (GA)n Simple_repeat Simple_repeat 1 28 0 1976 210 167 4 chr10 1583586 1584144 -144005144 + L1MB3 LINE L1 5534 6182 -1 522 324 0 0 chr10 1586115 1586534 -144002754 + (TATG)n Simple_repeat Simple_repeat 1 419 0 505 302 0 0 chr10 1586551 1586824 -144002464 + (TAGG)n Simple_repeat Simple_repeat 1 273 0 1818 120 31 51 chr10 1587720 1587888 -144001400 + L1PA13 LINE L1 5780 5950 -213 1988 134 10 0 chr10 1587888 1588180 -144001108 + AluSq SINE Alu 1 295 -18 1818 120 31 51 chr10 1588180 1588361 -144000927 + L1PA13 LINE L1 5950 6122 -41 261 189 0 38 chr10 1588376 1588429 -144000859 + L1PA13 LINE L1 6072 6122 -41 261 189 0 38 chr10 1588410 1588463 -144000825 + L1PA13 LINE L1 6072 6122 -41 227 226 0 38 chr10 1588478 1588531 -144000757 + L1PA13 LINE L1 6072 6122 -41 243 208 0 38 chr10 1588580 1588633 -144000655 + L1PA13 LINE L1 6072 6122 -41 243 208 0 38 chr10 1588614 1588667 -144000621 + L1PA13 LINE L1 6072 6122 -41 * 277 219 35 31 chr10 1588648 1588735 -144000553 + L1PA13 LINE L1 6072 6141 -22 243 208 0 38 chr10 1588750 1588803 -144000485 + L1PA13 LINE L1 6072 6122 -41 * 277 217 43 29 chr10 1588784 1588853 -144000435 + L1PA13 LINE L1 6072 6141 -22 241 233 0 33 chr10 1588845 1588905 -144000383 + L1PA13 LINE L1 6065 6122 -41 * 227 226 0 38 chr10 1589056 1589109 -144000179 + L1PA13 LINE L1 6072 6122 -41 * 277 217 43 29 chr10 1589090 1589159 -144000129 + L1PA13 LINE L1 6072 6141 -22 259 217 0 33 chr10 1589151 1589211 -144000077 + L1PA13 LINE L1 6065 6122 -41 * 236 211 0 39 chr10 1589192 1589244 -144000044 + L1PA13 LINE L1 6072 6121 -42 * 234 226 0 38 chr10 1589226 1589279 -144000009 + L1PA13 LINE L1 6072 6122 -41 * 246 208 0 38 chr10 1589260 1589313 -143999975 + L1PA13 LINE L1 6072 6122 -41 425 125 62 25 chr10 1589337 1589417 -143999871 + L1PA13 LINE L1 6081 6163 0 21 0 0 0 chr10 1589948 1589969 -143999319 + AT_rich Low_complexity Low_complexity 1 21 0 2110 120 0 10 chr10 1590158 1590450 -143998838 + AluSx SINE Alu 1 289 -23 659 240 0 6 chr10 1590941 1591293 -143997995 + (TG)n Simple_repeat Simple_repeat 1 349 0 586 244 66 77 chr10 1592334 1592698 -143996590 + MLT1A2 LTR MaLR 2 361 -13 245 258 61 15 chr10 1593590 1593656 -143995632 + MIR SINE MIR 55 123 -85 220 265 243 15 chr10 1593901 1594037 -143995251 + MIR SINE MIR 15 181 -81 2111 130 3 13 chr10 1594108 1594416 -143994872 + AluSx SINE Alu 1 305 -7 1711 185 7 7 chr10 1595595 1596069 -143993219 - AluJo SINE Alu 0 312 7 1102 77 0 0 chr10 1596824 1596954 -143992334 + AluYb8 SINE Alu 1 130 -188 21223 114 12 17 chr10 1596964 1600359 -143988929 + L1P LINE L1 11 3388 -2758 414 0 0 0 chr10 1601640 1601686 -143987602 + (CA)n Simple_repeat Simple_repeat 1 46 0 285 271 171 0 chr10 1601933 1602062 -143987226 - MIR SINE MIR -90 172 22 1996 196 217 10 chr10 1602394 1603002 -143986286 + L1MC1 LINE L1 5600 6333 0 1487 180 23 23 chr10 1603111 1603411 -143985877 + L1PA15 LINE L1 5865 6164 -1 2264 106 3 3 chr10 1605367 1605668 -143983620 + AluSq SINE Alu 1 301 -12 225 94 0 0 chr10 1605741 1605773 -143983515 + (TC)n Simple_repeat Simple_repeat 1 32 0 2167 85 0 41 chr10 1606387 1606682 -143982606 + AluSg SINE Alu 12 294 -16 943 151 17 6 chr10 1607812 1607991 -143981297 - MSTB LTR MaLR -245 181 1 345 273 0 0 chr10 1608300 1608428 -143980860 + (CA)n Simple_repeat Simple_repeat 2 129 0 528 258 0 0 chr10 1608451 1608629 -143980659 + (CA)n Simple_repeat Simple_repeat 1 178 0 471 50 25 12 chr10 1610215 1610295 -143978993 + (TCTA)n Simple_repeat Simple_repeat 2 82 0 182 275 0 0 chr10 1610302 1610342 -143978946 + L2 LINE L2 3255 3294 -19 300 172 0 0 chr10 1610364 1610422 -143978866 + (TGGA)n Simple_repeat Simple_repeat 4 61 0 1026 93 7 0 chr10 1612323 1612463 -143976825 - MER4E LTR ERV1 0 766 626 211 306 121 45 chr10 1613242 1613441 -143975847 - L2 LINE L2 -42 3271 3058 1835 112 0 79 chr10 1614750 1615080 -143974208 - AluSx SINE Alu 0 306 1 610 326 96 48 chr10 1615086 1615813 -143973475 - L2 LINE L2 -1904 1410 649 209 173 333 0 chr10 1616108 1616189 -143973099 + MER5A DNA MER1_type 61 168 -21 219 69 0 0 chr10 1619543 1619572 -143969716 + (TAA)n Simple_repeat Simple_repeat 2 30 0 2812 73 0 19 chr10 1619655 1620024 -143969264 + L1PA7 LINE L1 5792 6153 -1 398 276 88 0 chr10 1620103 1620273 -143969015 - MER5A DNA MER1_type 0 189 5 518 206 38 19 chr10 1620435 1620595 -143968693 - L1M4 LINE L1 -945 5201 5039 253 374 12 23 chr10 1620922 1621093 -143968195 - L2 LINE L2 -529 2785 2617 383 302 94 50 chr10 1621170 1621329 -143967959 + L2 LINE L2 3104 3269 -3 560 294 109 25 chr10 1621482 1621598 -143967690 + L2 LINE L2 1809 1914 -1400 189 0 0 0 chr10 1621598 1621619 -143967669 + (TC)n Simple_repeat Simple_repeat 1 21 0 560 294 109 25 chr10 1621619 1621777 -143967511 + L2 LINE L2 1914 2106 -1208 662 207 25 0 chr10 1621778 1621899 -143967389 - FRAM SINE Alu -21 155 32 525 276 23 6 chr10 1621918 1622092 -143967196 + MER5B DNA MER1_type 1 177 -1 1504 280 149 31 chr10 1622093 1623113 -143966175 + L2 LINE L2 2110 3309 -4 183 42 0 0 chr10 1623600 1623624 -143965664 + (CAA)n Simple_repeat Simple_repeat 2 25 0 285 229 0 0 chr10 1623969 1624030 -143965258 - LTR16A LTR ERVL -9 441 381 2590 134 3 3 chr10 1624031 1624405 -143964883 - THE1C LTR MaLR 0 375 2 1120 80 11 11 chr10 1624407 1624582 -143964706 - THE1C-int LTR MaLR -1 1579 1405 * 6422 115 53 8 chr10 1624580 1625580 -143963708 - THE1C-int LTR MaLR -535 1045 1 373 143 182 0 chr10 1625591 1625668 -143963620 - THE1C LTR MaLR -149 226 136 441 229 34 34 chr10 1625668 1625847 -143963441 + (CATGT)n Simple_repeat Simple_repeat 1 179 0 29537 97 8 16 chr10 1625954 1630419 -143958869 - L1P LINE L1 -1356 4790 358 1684 57 9 26 chr10 1630533 1630761 -143958527 + L1PA8 LINE L1 5947 6170 -2 372 373 158 6 chr10 1630790 1631112 -143958176 + L2 LINE L2 2452 2822 -492 235 264 108 48 chr10 1631138 1631305 -143957983 + L2 LINE L2 3122 3298 -15 214 217 22 0 chr10 1631357 1631403 -143957885 + L2 LINE L2 3220 3266 -6 2740 236 69 42 chr10 1632365 1633373 -143955915 + L1 LINE L1 2873 3908 -2238 22288 45 0 0 chr10 1633373 1636981 -143952307 + L1PA4 LINE L1 2585 6153 -2 245 269 20 12 chr10 1636989 1637114 -143952174 + L1 LINE L1 4247 4375 -1771 315 229 123 16 chr10 1637120 1637242 -143952046 + LTR33 LTR ERVL 2 136 -385 23 0 0 0 chr10 1638934 1638957 -143950331 + AT_rich Low_complexity Low_complexity 1 23 0 369 305 72 18 chr10 1639456 1639679 -143949609 - MARNA DNA Mariner -166 420 186 963 184 134 20 chr10 1640492 1640693 -143948595 + MER58A DNA MER1_type 1 224 0 292 336 116 14 chr10 1641097 1641243 -143948045 - MIR3 SINE MIR -11 197 37 411 280 100 10 chr10 1641285 1641485 -143947803 - LTR33 LTR ERVL 0 521 304 183 286 54 0 chr10 1641739 1641795 -143947493 + L2 LINE L2 3255 3313 0 1535 210 12 18 chr10 1641987 1642325 -143946963 - MLT1E3 LTR MaLR 0 624 289 670 150 19 3 chr10 1642353 1642525 -143946763 - MLT1E1 LTR MaLR -424 230 5 21 0 0 0 chr10 1642623 1642644 -143946644 + AT_rich Low_complexity Low_complexity 1 21 0 229 67 0 167 chr10 1642919 1642979 -143946309 + MER50 LTR ERV1 658 707 -27 1837 155 16 13 chr10 1643004 1643314 -143945974 - AluJb SINE Alu -1 311 1 347 202 11 0 chr10 1645836 1645925 -143943363 + GA-rich Low_complexity Low_complexity 1 90 0 2446 133 14 0 chr10 1646937 1647305 -143941983 + MER83C LTR ERV1 1 373 0 4568 214 52 24 chr10 1649709 1650128 -143939160 + L1 LINE L1 3950 4355 -1791 2352 84 0 14 chr10 1650128 1650425 -143938863 + AluY SINE Alu 1 293 -18 4568 214 52 24 chr10 1650425 1651280 -143938008 + L1 LINE L1 4355 5261 -885 214 346 53 30 chr10 1651541 1651674 -143937614 + L3 LINE CR1 812 947 -630 1676 138 7 22 chr10 1652497 1652773 -143936515 - AluSx SINE Alu -6 306 35 671 283 28 31 chr10 1653525 1653898 -143935390 + L1MA9 LINE L1 5935 6306 -6 240 86 0 0 chr10 1654491 1654526 -143934762 + (CA)n Simple_repeat Simple_repeat 1 35 0 2385 100 0 3 chr10 1656845 1657155 -143932133 + AluSg SINE Alu 1 309 -1 4421 165 14 7 chr10 1660149 1661034 -143928254 + L1PB4 LINE L1 5183 6072 -84 524 233 15 0 chr10 1661136 1661269 -143928019 + L1PB4 LINE L1 6022 6156 0 209 326 45 0 chr10 1662127 1662216 -143927072 + MIR SINE MIR 117 209 -53 1754 160 13 26 chr10 1662574 1662880 -143926408 - AluJb SINE Alu -10 302 1 2252 124 0 3 chr10 1663214 1663520 -143925768 + AluSx SINE Alu 1 305 -7 542 239 6 0 chr10 1665453 1665629 -143923659 + (CA)n Simple_repeat Simple_repeat 2 178 0 542 254 3 3 chr10 1665672 1666023 -143923265 + (CA)n Simple_repeat Simple_repeat 1 351 0 202 222 0 22 chr10 1666681 1666726 -143922562 + L2 LINE L2 3261 3304 -9 345 269 148 9 chr10 1668045 1668153 -143921135 - MER5A DNA MER1_type -1 188 66 251 229 0 29 chr10 1668434 1668504 -143920784 + CT-rich Low_complexity Low_complexity 1 68 0 319 266 132 82 chr10 1668953 1669430 -143919858 - L1MEc LINE L1 -4657 1906 1406 222 272 0 26 chr10 1669588 1669777 -143919511 + CT-rich Low_complexity Low_complexity 1 184 0 210 200 32 42 chr10 1669790 1669885 -143919403 + (TCTCG)n Simple_repeat Simple_repeat 2 95 0 345 316 37 0 chr10 1670994 1671130 -143918158 + (CATG)n Simple_repeat Simple_repeat 3 143 0 315 122 0 0 chr10 1673696 1673745 -143915543 + (GA)n Simple_repeat Simple_repeat 1 49 0 252 0 0 0 chr10 1674196 1674224 -143915064 + (TG)n Simple_repeat Simple_repeat 1 28 0 368 230 0 6 chr10 1675015 1675193 -143914095 + CT-rich Low_complexity Low_complexity 2 178 0 323 306 183 31 chr10 1675233 1675681 -143913607 - L1MEc LINE L1 -5063 1321 806 213 146 0 0 chr10 1675725 1675773 -143913515 + (TC)n Simple_repeat Simple_repeat 1 48 0 2495 94 173 5 chr10 1677660 1678076 -143911212 + LTR19A LTR ERV1 1 486 0 873 254 139 68 chr10 1678877 1679439 -143909849 + MLT1E2 LTR MaLR 20 621 -5 26 30 0 0 chr10 1679916 1679949 -143909339 + AT_rich Low_complexity Low_complexity 1 33 0 2381 209 51 41 chr10 1679965 1680461 -143908827 - L1MC3 LINE L1 -1 7784 7294 2224 121 7 0 chr10 1680461 1680758 -143908530 - AluSx SINE Alu -13 299 1 2381 209 51 41 chr10 1680758 1680934 -143908354 - L1MC3 LINE L1 -491 7294 5648 283 329 0 0 chr10 1680936 1681094 -143908194 + (TG)n Simple_repeat Simple_repeat 2 159 0 861 231 16 0 chr10 1681109 1681308 -143907980 - L1MC/D LINE L1 -582 5572 5493 261 315 76 51 chr10 1681428 1681625 -143907663 - MIR SINE MIR -37 225 24 644 206 6 17 chr10 1682796 1682976 -143906312 + (TATG)n Simple_repeat Simple_repeat 2 179 0 184 338 73 50 chr10 1683844 1684063 -143905225 - MIR SINE MIR -14 248 25 212 310 126 0 chr10 1687335 1687422 -143901866 - L2 LINE L2 -3 3310 3213 187 266 9 9 chr10 1691318 1691427 -143897861 + (TG)n Simple_repeat Simple_repeat 1 109 0 418 313 50 0 chr10 1691427 1691587 -143897701 + (CATG)n Simple_repeat Simple_repeat 1 168 0 205 264 28 7 chr10 1691604 1691748 -143897540 + (TG)n Simple_repeat Simple_repeat 2 148 0 193 311 0 14 chr10 1691883 1691957 -143897331 - L3b LINE CR1 -210 1373 1301 1603 91 45 0 chr10 1692257 1692477 -143896811 - MER30 DNA MER1_type 0 230 1 1921 166 0 3 chr10 1694153 1694454 -143894834 - AluSx SINE Alu -12 300 1 231 269 83 9 chr10 1698481 1698589 -143890699 + L1ME4a LINE L1 6006 6121 0 225 301 88 37 chr10 1698791 1699007 -143890281 - L2 LINE L2 -215 3098 2872 * 310 288 64 0 chr10 1698983 1699108 -143890180 - L2 LINE L2 -1579 1735 1603 516 183 39 0 chr10 1699562 1699666 -143889622 - MLT1F1 LTR MaLR -3 564 457 3304 138 25 6 chr10 1699692 1700206 -143889082 - MER1A DNA MER1_type -5 524 1 23 0 0 0 chr10 1700655 1700678 -143888610 + AT_rich Low_complexity Low_complexity 1 23 0 345 269 32 11 chr10 1704249 1704342 -143884946 + MIR SINE MIR 124 218 -44 181 228 158 79 chr10 1707112 1707213 -143882075 + MIR SINE MIR 18 126 -82 1172 99 0 0 chr10 1707865 1708007 -143881281 - AluSq/x SINE Alu -170 142 1 256 250 65 46 chr10 1710168 1710276 -143879012 + MER5A DNA MER1_type 59 168 -21 667 166 24 19 chr10 1712344 1712536 -143876752 + GA-rich Low_complexity Low_complexity 1 190 -237 186 43 0 0 chr10 1712536 1712559 -143876729 + (GGGA)n Simple_repeat Simple_repeat 4 26 0 667 166 24 19 chr10 1712559 1712769 -143876519 + GA-rich Low_complexity Low_complexity 190 427 0 189 300 89 11 chr10 1714274 1714364 -143874924 + L2 LINE L2 1354 1450 -1864 588 218 0 0 chr10 1714651 1714825 -143874463 + (CA)n Simple_repeat Simple_repeat 1 174 0 225 163 61 0 chr10 1714826 1714875 -143874413 - MLT1B LTR MaLR -336 54 3 328 296 138 0 chr10 1716414 1716573 -143872715 - MIR SINE MIR -64 198 18 247 202 18 175 chr10 1716575 1716689 -143872599 + MER58 DNA MER1_type 1 96 -119 418 214 41 0 chr10 1716693 1716791 -143872497 + MER58 DNA MER1_type 2318 2419 -1 2496 67 0 0 chr10 1718532 1718830 -143870458 + AluY SINE Alu 1 298 -13 235 273 68 0 chr10 1720250 1720338 -143868950 + LTR33 LTR ERVL 2 95 -426 273 274 53 0 chr10 1721907 1722020 -143867268 + LTR33 LTR ERVL 385 503 -18 537 239 8 0 chr10 1722455 1722572 -143866716 - AluSg/x SINE Alu -21 289 172 744 242 15 14 chr10 1722968 1723261 -143866027 + L1ME1 LINE L1 2286 2576 -3806 3614 274 84 19 chr10 1723264 1723363 -143865925 + L1ME1 LINE L1 2802 2893 -3489 2141 118 14 0 chr10 1723363 1723650 -143865638 - AluSc SINE Alu -18 291 1 3614 274 84 19 chr10 1723650 1725293 -143863995 + L1ME1 LINE L1 2893 4658 -1724 1342 184 0 0 chr10 1725304 1725521 -143863767 - AluJb SINE Alu 0 312 96 2684 231 66 32 chr10 1725557 1726707 -143862581 + L1ME1 LINE L1 4674 5855 -547 805 327 18 3 chr10 1726854 1727187 -143862101 + L1ME1 LINE L1 5891 6228 -174 529 229 88 35 chr10 1727829 1727970 -143861318 - MIR SINE MIR -72 190 37 1642 203 3 16 chr10 1727970 1728314 -143860974 + AluJb SINE Alu 6 312 0 529 229 88 35 chr10 1728314 1728342 -143860946 - MIR SINE MIR -225 37 12 24 0 0 0 chr10 1728665 1728689 -143860599 + AT_rich Low_complexity Low_complexity 1 24 0 23 33 0 0 chr10 1728976 1729006 -143860282 + AT_rich Low_complexity Low_complexity 1 30 0 259 114 0 0 chr10 1730838 1730882 -143858406 - HSMAR1 DNA Mariner -1243 44 1 184 321 57 0 chr10 1733200 1733253 -143856035 - MIR3 SINE MIR -48 160 105 330 328 103 29 chr10 1734178 1734382 -143854906 - L2 LINE L2 -1 3312 3094 1998 120 0 11 chr10 1734721 1735039 -143854249 + AluSg SINE Alu 33 310 0 222 222 0 19 chr10 1735225 1735279 -143854009 + CT-rich Low_complexity Low_complexity 1 53 0 322 261 13 21 chr10 1736255 1736495 -143852793 + (CA)n Simple_repeat Simple_repeat 1 237 0 1575 215 35 81 chr10 1736815 1737311 -143851977 + MLT2B1 LTR ERVL 1 518 -2 1055 206 59 0 chr10 1737311 1737530 -143851758 + MER46A DNA MER2_type 1 232 -4 796 74 8 8 chr10 1737538 1737660 -143851628 + (TCTA)n Simple_repeat Simple_repeat 3 124 0 1575 215 35 81 chr10 1737660 1737699 -143851589 + MLT2B1 LTR ERVL 481 520 0 1970 159 10 0 chr10 1740249 1740544 -143848744 + AluJb SINE Alu 1 298 -14 207 162 35 35 chr10 1740683 1740856 -143848432 + (TA)n Simple_repeat Simple_repeat 1 173 0 269 171 57 0 chr10 1740869 1740957 -143848331 + (TA)n Simple_repeat Simple_repeat 1 93 0 505 320 39 11 chr10 1742570 1742751 -143846537 - MIR SINE MIR -10 252 67 2086 89 7 14 chr10 1743576 1743890 -143845398 + AluSg SINE Alu 1 312 0 268 31 0 0 chr10 1743858 1743910 -143845378 + (CAAAA)n Simple_repeat Simple_repeat 3 54 0 271 234 0 0 chr10 1744098 1744145 -143845143 - L3 LINE CR1 -112 1465 1419 252 137 0 0 chr10 1744650 1744701 -143844587 + (CA)n Simple_repeat Simple_repeat 2 52 0 2254 107 0 0 chr10 1745745 1746036 -143843252 + AluSx SINE Alu 1 291 -21 285 340 97 0 chr10 1746214 1746317 -143842971 + L2 LINE L2 3199 3311 -2 21 0 0 0 chr10 1746579 1746600 -143842688 + AT_rich Low_complexity Low_complexity 1 21 0 347 211 0 7 chr10 1746703 1746850 -143842438 + (CA)n Simple_repeat Simple_repeat 2 147 0 302 297 159 12 chr10 1747030 1747196 -143842092 - MIR SINE MIR -58 150 14 285 217 86 99 chr10 1749955 1750107 -143839181 - L2 LINE L2 -93 3179 3030 180 219 0 0 chr10 1751335 1751376 -143837912 + (TG)n Simple_repeat Simple_repeat 1 41 0 308 330 23 0 chr10 1751389 1751477 -143837811 - L1MC4 LINE L1 -1339 6703 6614 225 186 71 29 chr10 1751478 1751548 -143837740 + L1MCa LINE L1 1996 2068 -4358 248 264 0 9 chr10 1751550 1751660 -143837628 + (TATG)n Simple_repeat Simple_repeat 4 112 0 332 246 107 3 chr10 1754176 1754340 -143834948 + MER67D LTR ERV1 274 514 0 353 175 10 0 chr10 1755454 1755557 -143833731 + (CA)n Simple_repeat Simple_repeat 1 104 0 540 200 0 0 chr10 1755619 1755799 -143833489 + (CA)n Simple_repeat Simple_repeat 1 180 0 418 191 0 22 chr10 1755830 1756013 -143833275 + (CA)n Simple_repeat Simple_repeat 2 180 0 275 369 37 0 chr10 1756429 1756616 -143832672 + Charlie8 DNA MER1_type 28 221 -2196 215 291 18 0 chr10 1758909 1758964 -143830324 - MIR SINE MIR -64 144 89 330 26 0 0 chr10 1759378 1759417 -143829871 + (TG)n Simple_repeat Simple_repeat 2 40 0 244 363 71 0 chr10 1759883 1759996 -143829292 + MIR SINE MIR 48 168 -94 200 238 95 71 chr10 1761218 1761344 -143827944 + MIR SINE MIR 24 152 -110 630 203 68 0 chr10 1762071 1762189 -143827099 - FLAM_A SINE Alu -7 126 1 426 207 0 0 chr10 1764777 1764859 -143824429 - MER94 DNA DNA -52 82 1 498 380 22 0 chr10 1767023 1767207 -143822081 + MIR3 SINE MIR 14 201 -7 196 303 278 25 chr10 1768590 1768752 -143820536 - MIR SINE MIR -28 234 32 21 0 0 0 chr10 1770225 1770246 -143819042 + AT_rich Low_complexity Low_complexity 1 21 0 192 200 0 0 chr10 1770719 1770779 -143818509 + (TG)n Simple_repeat Simple_repeat 1 60 0 2180 112 14 0 chr10 1772568 1772862 -143816426 - AluSx SINE Alu -12 300 3 23 33 0 0 chr10 1773162 1773192 -143816096 + AT_rich Low_complexity Low_complexity 1 30 0 2649 127 33 55 chr10 1774520 1774976 -143814312 - MER83 LTR ERV1 -2 446 1 340 291 108 54 chr10 1775097 1775392 -143813896 - L1MC4a LINE L1 -1934 5874 5564 223 26 77 0 chr10 1775517 1775556 -143813732 + T-rich Low_complexity Low_complexity 1 42 0 2295 168 8 0 chr10 1776554 1776941 -143812347 + MLT1B LTR MaLR 1 390 0 290 259 63 63 chr10 1777072 1777230 -143812058 + Charlie5 DNA MER1_type 2401 2558 -54 198 0 0 0 chr10 1777438 1777460 -143811828 + (TG)n Simple_repeat Simple_repeat 1 22 0 257 303 55 28 chr10 1777512 1777621 -143811667 + L2 LINE L2 3199 3310 -3 1597 21 0 16 chr10 1780864 1781054 -143808234 - L1PA4 LINE L1 -4 6151 5965 262 282 129 16 chr10 1782570 1782694 -143806594 - MER103 DNA DNA -12 154 17 210 91 0 0 chr10 1783168 1783201 -143806087 + (T)n Simple_repeat Simple_repeat 1 33 0 447 159 0 28 chr10 1783464 1783571 -143805717 + CT-rich Low_complexity Low_complexity 3 106 0 2036 159 7 0 chr10 1783579 1783887 -143805401 - AluSx SINE Alu 0 312 3 210 143 0 0 chr10 1784064 1784099 -143805189 + (GGGA)n Simple_repeat Simple_repeat 4 38 0 180 0 0 0 chr10 1784987 1785007 -143804281 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1913 127 0 12 chr10 1785016 1785275 -143804013 - AluSx SINE Alu -56 256 1 4661 154 47 9 chr10 1785537 1786533 -143802755 + L1PA16 LINE L1 5118 6161 -5 254 57 0 0 chr10 1786533 1786568 -143802720 + L1PA16 LINE L1 6127 6161 -5 237 286 0 59 chr10 1788909 1788950 -143800338 + (CATATA)n Simple_repeat Simple_repeat 3 45 -69 183 80 0 0 chr10 1788950 1788975 -143800313 + (CA)n Simple_repeat Simple_repeat 2 26 0 237 286 0 59 chr10 1788975 1789052 -143800236 + (CATATA)n Simple_repeat Simple_repeat 45 114 0 248 307 72 42 chr10 1789395 1789561 -143799727 + MIR3 SINE MIR 14 184 -24 671 207 0 0 chr10 1790038 1790159 -143799129 + MLT1B LTR MaLR 1 121 -269 415 233 103 0 chr10 1790905 1791021 -143798267 + MIR SINE MIR 133 260 -2 281 267 27 0 chr10 1793001 1793076 -143796212 + L2 LINE L2 3191 3267 -5 273 147 29 15 chr10 1798185 1798253 -143791035 + (TA)n Simple_repeat Simple_repeat 1 69 0 180 0 0 0 chr10 1800303 1800323 -143788965 + (T)n Simple_repeat Simple_repeat 1 20 0 21 0 0 0 chr10 1800893 1800914 -143788374 + AT_rich Low_complexity Low_complexity 1 21 0 449 238 156 0 chr10 1804698 1804820 -143784468 + MIR SINE MIR 36 176 -86 316 292 128 32 chr10 1806520 1806739 -143782549 - MIR SINE MIR -21 241 2 1789 110 0 0 chr10 1807922 1808187 -143781101 + AluSx SINE Alu 50 314 0 1078 164 5 21 chr10 1812697 1812886 -143776402 + AluJb SINE Alu 34 219 -93 1901 270 28 24 chr10 1814167 1814749 -143774539 + L1MC2 LINE L1 156 739 -5825 783 175 81 6 chr10 1814749 1814909 -143774379 + MER30B DNA MER1_type 19 190 0 3685 196 57 21 chr10 1814956 1816128 -143773160 + L1MC2 LINE L1 574 1802 -4762 * 4762 178 39 24 chr10 1816115 1816213 -143773075 + L1MC2 LINE L1 5609 5704 -1058 2517 8 0 0 chr10 1816213 1816481 -143772807 + AluY SINE Alu 44 311 0 4762 178 39 24 chr10 1816481 1817421 -143771867 + L1MC2 LINE L1 5704 6664 -98 282 329 0 0 chr10 1818126 1818208 -143771080 + MER5B DNA MER1_type 97 178 0 230 140 40 140 chr10 1820954 1821054 -143768234 + MER39 LTR ERV1 62 151 -556 486 0 0 0 chr10 1821635 1821689 -143767599 + (CA)n Simple_repeat Simple_repeat 2 55 0 22 0 0 0 chr10 1822269 1822291 -143766997 + AT_rich Low_complexity Low_complexity 1 22 0 204 125 0 0 chr10 1822729 1822761 -143766527 + (CATATA)n Simple_repeat Simple_repeat 2 33 0 273 176 0 88 chr10 1822764 1822866 -143766422 + L1MC4 LINE L1 6611 6703 -1339 285 288 0 0 chr10 1873617 1873690 -143715598 + (TA)n Simple_repeat Simple_repeat 2 74 0 1660 53 5 0 chr10 1874323 1874529 -143714759 - AluY SINE Alu -3 308 102 1756 140 19 0 chr10 1875046 1875310 -143713978 - AluSg SINE Alu -18 292 24 1508 168 38 52 chr10 1875340 1875631 -143713657 - AluJb SINE Alu -25 287 1 23 0 0 0 chr10 1875820 1875843 -143713445 + AT_rich Low_complexity Low_complexity 1 23 0 1760 111 96 4 chr10 1875871 1876164 -143713124 + AluSp SINE Alu 1 317 0 2635 129 26 7 chr10 1876904 1877331 -143711957 + MER83 LTR ERV1 5 439 -9 298 226 73 15 chr10 1877466 1877603 -143711685 - L1ME4a LINE L1 -210 5911 5767 30 69 0 0 chr10 1877606 1877664 -143711624 + AT_rich Low_complexity Low_complexity 1 58 0 29 0 0 0 chr10 1877751 1877780 -143711508 + AT_rich Low_complexity Low_complexity 1 29 0 342 240 39 19 chr10 1877830 1877952 -143711336 - L1MC2 LINE L1 -10 7145 7017 4923 200 23 11 chr10 1878048 1879516 -143709772 - L1MC3 LINE L1 -109 7676 4724 1279 149 8 56 chr10 1879516 1879784 -143709504 - MER44D DNA MER2_type -84 525 1 441 246 0 0 chr10 1880842 1880976 -143708312 + (CA)n Simple_repeat Simple_repeat 1 134 0 183 122 163 0 chr10 1881362 1881411 -143707877 - MER5C DNA MER1_type -226 98 42 570 169 0 0 chr10 1881606 1881724 -143707564 + (TCTA)n Simple_repeat Simple_repeat 3 120 0 353 236 9 9 chr10 1881727 1881833 -143707455 - L1MC2 LINE L1 -2337 6282 6177 252 86 0 0 chr10 1882043 1882078 -143707210 + (TG)n Simple_repeat Simple_repeat 1 35 0 1159 200 18 18 chr10 1883295 1883575 -143705713 + L1 LINE L1 4000 4279 -1867 235 291 94 16 chr10 1883738 1883865 -143705423 - L1MC2 LINE L1 -1981 4976 4840 305 280 94 24 chr10 1883980 1884309 -143704979 - L1MC2 LINE L1 -2406 4551 4200 261 165 44 22 chr10 1884344 1884435 -143704853 + (TA)n Simple_repeat Simple_repeat 1 93 0 275 276 25 45 chr10 1884460 1884659 -143704629 - L1MC2 LINE L1 -2832 4125 3931 22 56 0 0 chr10 1884993 1885029 -143704259 + AT_rich Low_complexity Low_complexity 1 36 0 1336 167 85 35 chr10 1885068 1885350 -143703938 + AluJb SINE Alu 3 298 -14 28 61 0 0 chr10 1886157 1886206 -143703082 + AT_rich Low_complexity Low_complexity 1 49 0 2400 24 0 14 chr10 1887191 1887495 -143701793 - L1PA4 LINE L1 -181 5974 5675 1283 67 0 46 chr10 1887495 1887722 -143701566 + L1PA4 LINE L1 5970 6155 0 24 32 0 0 chr10 1889900 1889931 -143699357 + AT_rich Low_complexity Low_complexity 1 31 0 824 55 31 0 chr10 1891223 1891350 -143697938 + (TCTA)n Simple_repeat Simple_repeat 4 134 0 1810 163 25 0 chr10 1891408 1891691 -143697597 + AluSx SINE Alu 1 290 -22 1211 156 20 8 chr10 1892056 1892306 -143696982 - L1MA4 LINE L1 0 6300 6048 21 0 0 0 chr10 1892624 1892645 -143696643 + AT_rich Low_complexity Low_complexity 1 21 0 21 0 0 0 chr10 1893448 1893469 -143695819 + AT_rich Low_complexity Low_complexity 1 21 0 785 302 121 6 chr10 1894484 1895162 -143694126 - L1MC2 LINE L1 -3161 3796 3041 450 293 87 16 chr10 1895603 1896124 -143693164 - L1MC2 LINE L1 -4471 2486 1971 338 242 123 76 chr10 1896132 1896434 -143692854 - L1MC2 LINE L1 -5046 1914 1599 186 393 0 22 chr10 1896465 1896554 -143692734 - L2 LINE L2 -43 3229 3143 1320 179 126 60 chr10 1896789 1897244 -143692044 - L1MA9 LINE L1 -4 6308 5825 1060 279 61 0 chr10 1900489 1900865 -143688423 - L1MC2 LINE L1 -6086 773 375 233 296 20 0 chr10 1900981 1901079 -143688209 - L1MC2 LINE L1 -6457 402 303 2097 118 28 0 chr10 1901261 1901548 -143687740 + AluSx SINE Alu 1 295 -17 24 77 0 0 chr10 1902015 1902067 -143687221 + AT_rich Low_complexity Low_complexity 1 52 0 198 0 0 0 chr10 1902594 1902616 -143686672 + (T)n Simple_repeat Simple_repeat 1 22 0 1601 193 11 0 chr10 1903469 1903754 -143685534 + AluJo SINE Alu 5 292 -20 385 295 46 18 chr10 1904749 1905034 -143684254 + HAL1 LINE L1 993 1285 -1222 22 0 0 0 chr10 1907682 1907704 -143681584 + AT_rich Low_complexity Low_complexity 1 22 0 2131 125 0 3 chr10 1907706 1908009 -143681279 + AluSx SINE Alu 1 302 -10 225 0 0 0 chr10 1909179 1909204 -143680084 + (TTTTA)n Simple_repeat Simple_repeat 5 29 0 2293 108 0 0 chr10 1909324 1909621 -143679667 + AluSq SINE Alu 1 297 -16 313 322 43 6 chr10 1909916 1910252 -143679036 - L1ME LINE L1 -661 5501 5155 1602 179 55 10 chr10 1910775 1911065 -143678223 - AluJb SINE Alu -9 303 1 798 251 45 0 chr10 1911092 1911315 -143677973 + MLT2C2 LTR ERVL 1 233 -231 318 50 0 0 chr10 1911330 1911370 -143677918 + (TG)n Simple_repeat Simple_repeat 2 41 0 2843 200 38 22 chr10 1911376 1912091 -143677197 + ERVL LTR ERVL 3105 3830 -1934 327 203 0 0 chr10 1912117 1912186 -143677102 + (TG)n Simple_repeat Simple_repeat 2 70 0 700 193 0 8 chr10 1912515 1912634 -143676654 - AluJb SINE Alu -183 129 12 1843 158 0 7 chr10 1912853 1913156 -143676132 + AluJo SINE Alu 1 301 -11 204 245 0 0 chr10 1913831 1913880 -143675408 + T-rich Low_complexity Low_complexity 1 49 0 216 314 0 0 chr10 1913981 1914051 -143675237 + T-rich Low_complexity Low_complexity 2 71 0 2207 124 0 0 chr10 1919600 1919907 -143669381 - AluSg SINE Alu -3 307 1 205 161 0 0 chr10 1920492 1920523 -143668765 + (TTCA)n Simple_repeat Simple_repeat 3 33 0 224 291 0 0 chr10 1920525 1920580 -143668708 - L2 LINE L2 -6 3307 3253 1874 143 0 34 chr10 1921093 1921417 -143667871 + AluSx SINE Alu 1 314 0 461 299 65 23 chr10 1921932 1922283 -143667005 + LTR16C LTR ERVL 124 489 -2 1378 216 28 48 chr10 1923063 1923340 -143665948 - MLT1C LTR MaLR -14 453 187 2544 74 0 0 chr10 1923340 1923651 -143665637 - AluY SINE Alu 0 311 1 1378 216 28 48 chr10 1923651 1923835 -143665453 - MLT1C LTR MaLR -280 187 1 299 234 0 39 chr10 1924233 1924310 -143664978 + CT-rich Low_complexity Low_complexity 3 76 0 28 107 0 0 chr10 1924708 1924820 -143664468 + AT_rich Low_complexity Low_complexity 1 112 0 343 325 32 0 chr10 1925161 1925287 -143664001 + MIR SINE MIR 16 145 -117 601 333 51 30 chr10 1927271 1927607 -143661681 - L2 LINE L2 -711 2603 2261 474 228 43 47 chr10 1927623 1927855 -143661433 + MER76 LTR ERV 1 231 -457 2195 96 7 0 chr10 1928722 1929025 -143660263 + AluSg SINE Alu 1 305 -5 2300 111 0 0 chr10 1930865 1931171 -143658117 + AluSq SINE Alu 2 307 -6 6186 277 46 26 chr10 1931318 1932951 -143656337 - L1MCb LINE L1 -758 5806 4206 1614 170 0 47 chr10 1932951 1933269 -143656019 - AluJb SINE Alu -2 310 8 6186 277 46 26 chr10 1933269 1934890 -143654398 - L1MCb LINE L1 -2358 4206 2589 2722 31 0 0 chr10 1934890 1935210 -143654078 + L1PA4 LINE L1 5833 6152 -3 6186 277 46 26 chr10 1935210 1935501 -143653787 - L1MCb LINE L1 -3975 2589 2305 2279 263 60 24 chr10 1935652 1937376 -143651912 - L1MCb LINE L1 -4545 2019 122 513 326 15 34 chr10 1937515 1937777 -143651511 - L1MC4 LINE L1 -939 6904 6587 403 285 135 53 chr10 1937897 1938695 -143650593 - L1MC4a LINE L1 -1193 6615 5728 208 204 0 61 chr10 1939234 1939283 -143650005 + L2 LINE L2 3187 3232 -81 21 36 0 0 chr10 1939482 1939510 -143649778 + AT_rich Low_complexity Low_complexity 1 28 0 229 261 137 13 chr10 1939516 1939669 -143649619 + L1MC/D LINE L1 5305 5476 -2332 246 266 0 0 chr10 1940765 1940844 -143648444 + (TG)n Simple_repeat Simple_repeat 1 79 0 252 0 0 0 chr10 1941454 1941482 -143647806 + (A)n Simple_repeat Simple_repeat 1 28 0 363 307 85 28 chr10 1943253 1943465 -143645823 - MIR SINE MIR -12 250 27 234 91 0 0 chr10 1945037 1945070 -143644218 + (TG)n Simple_repeat Simple_repeat 2 34 0 916 99 0 23 chr10 1945611 1945742 -143643546 + Charlie3 DNA MER1_type 2347 2474 -236 624 322 120 7 chr10 1945767 1946226 -143643062 + L2 LINE L2 1415 1925 -1389 421 227 104 25 chr10 1947874 1948037 -143641251 - MLT1F LTR MaLR -8 534 359 192 125 0 0 chr10 1949026 1949058 -143640230 + (A)n Simple_repeat Simple_repeat 1 32 0 23 33 0 0 chr10 1949178 1949208 -143640080 + AT_rich Low_complexity Low_complexity 1 30 0 1431 175 137 30 chr10 1949879 1950216 -143639072 - THE1C LTR MaLR -2 373 1 856 210 0 0 chr10 1950409 1950576 -143638712 - AluJb SINE Alu -9 303 137 21 0 0 0 chr10 1950998 1951019 -143638269 + AT_rich Low_complexity Low_complexity 1 21 0 2151 174 12 26 chr10 1951019 1951443 -143637845 - L1MA7 LINE L1 0 6291 5874 1996 116 17 33 chr10 1951729 1952030 -143637258 + AluJb SINE Alu 3 298 -14 232 309 0 0 chr10 1952344 1952428 -143636860 + (TA)n Simple_repeat Simple_repeat 2 85 0 1450 134 138 79 chr10 1952991 1953282 -143636006 - AluJb SINE Alu -4 308 1 457 275 116 21 chr10 1953652 1954047 -143635241 + MLT1H LTR MaLR 72 527 -22 292 359 0 9 chr10 1954342 1954448 -143634840 + MLT1-int LTR MaLR 441 545 -826 210 71 0 0 chr10 1956315 1956343 -143632945 + (TTTG)n Simple_repeat Simple_repeat 2 29 0 371 300 47 107 chr10 1956852 1957152 -143632136 + L1ME3 LINE L1 204 485 -6078 1454 284 55 22 chr10 1957235 1957870 -143631418 + L1ME1 LINE L1 5506 6161 -5 1131 274 41 19 chr10 1957867 1958453 -143630835 + L1ME3 LINE L1 1630 2403 -4160 * 2850 261 76 57 chr10 1958522 1958559 -143630729 + L1ME3 LINE L1 3652 3687 -2670 1840 124 16 0 chr10 1958559 1958817 -143630471 + AluSq SINE Alu 34 295 -18 2850 261 76 57 chr10 1958817 1960968 -143628320 + L1ME3 LINE L1 3687 5875 -482 25 51 0 0 chr10 1961089 1961128 -143628160 + AT_rich Low_complexity Low_complexity 1 39 0 6538 137 7 1 chr10 1961145 1962361 -143626927 - L1PB1 LINE L1 -1 6150 4925 936 266 113 11 chr10 1962362 1962715 -143626573 + L1ME3 LINE L1 5992 6380 -18 2491 70 0 0 chr10 1962945 1963246 -143626042 - AluY SINE Alu -10 301 1 28 48 0 0 chr10 1963460 1963502 -143625786 + AT_rich Low_complexity Low_complexity 1 42 0 494 31 16 0 chr10 1964361 1964425 -143624863 + (TTCC)n Simple_repeat Simple_repeat 4 68 0 235 306 83 17 chr10 1964936 1965116 -143624172 - L1MCc LINE L1 -5972 451 260 2256 93 7 0 chr10 1965484 1965773 -143623515 - AluSx SINE Alu -21 291 1 618 242 0 0 chr10 1966526 1966658 -143622630 - L1PB4 LINE L1 -2 6154 6023 249 196 0 0 chr10 1966844 1966895 -143622393 + (TATATG)n Simple_repeat Simple_repeat 4 54 0 39 22 0 0 chr10 1967696 1967742 -143621546 + AT_rich Low_complexity Low_complexity 1 46 0 192 40 0 0 chr10 1968546 1968571 -143620717 + (CAAA)n Simple_repeat Simple_repeat 2 26 0 213 196 0 0 chr10 1969033 1969079 -143620209 + (CA)n Simple_repeat Simple_repeat 2 47 0 2130 125 3 0 chr10 1969567 1969862 -143619426 - AluSg SINE Alu -14 296 1 328 228 139 0 chr10 1971591 1971692 -143617596 + MLT1E LTR MaLR 22 136 -457 837 236 75 12 chr10 1971776 1972017 -143617271 + MLT1E LTR MaLR 289 544 -49 522 304 34 29 chr10 1972085 1972292 -143616996 + MIR SINE MIR 23 230 -32 686 268 115 102 chr10 1973543 1975112 -143614176 - HAL1 LINE L1 -110 2397 808 279 328 86 27 chr10 1975544 1975730 -143613558 - MIR SINE MIR -19 243 47 470 128 0 70 chr10 1976267 1976353 -143612935 + MADE1 DNA Mariner 1 80 0 4588 51 45 4 chr10 1976425 1976978 -143612310 - L1PA7 LINE L1 -7 6147 5572 216 319 104 52 chr10 1977892 1978027 -143611261 + MIR SINE MIR 47 188 -74 2158 228 84 16 chr10 1978998 1979603 -143609685 + L1MB5 LINE L1 5529 6174 0 294 50 0 0 chr10 1979620 1979660 -143609628 + L1MB4 LINE L1 6139 6178 -2 360 55 36 0 chr10 1979661 1979716 -143609572 - Alu SINE Alu 0 300 244 2320 103 0 0 chr10 1979826 1980136 -143609152 - AluY SINE Alu 0 311 2 207 0 0 0 chr10 1980735 1980758 -143608530 + (T)n Simple_repeat Simple_repeat 1 23 0 643 274 96 5 chr10 1980928 1981147 -143608141 - MIR SINE MIR -20 242 4 231 277 69 40 chr10 1982237 1982338 -143606950 - MER5A DNA MER1_type -48 141 38 188 286 58 52 chr10 1982439 1982593 -143606695 - MIR SINE MIR -106 156 2 31 58 0 0 chr10 1983629 1983681 -143605607 + AT_rich Low_complexity Low_complexity 1 52 0 225 57 38 57 chr10 1984239 1984292 -143604996 + (TAGA)n Simple_repeat Simple_repeat 4 55 0 581 106 33 50 chr10 1984325 1984505 -143604783 + (TAGA)n Simple_repeat Simple_repeat 3 179 0 598 115 59 49 chr10 1984519 1984992 -143604296 + (TAGA)n Simple_repeat Simple_repeat 1 477 0 1749 173 0 19 chr10 1985121 1985433 -143603855 + AluJb SINE Alu 7 312 0 302 80 20 0 chr10 1986353 1986403 -143602885 + (CAAAA)n Simple_repeat Simple_repeat 1 51 0 554 0 15 0 chr10 1986436 1986502 -143602786 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 315 0 0 0 chr10 1987012 1987047 -143602241 + (CA)n Simple_repeat Simple_repeat 2 36 0 364 181 60 45 chr10 1987479 1987612 -143601676 - LTR16A1 LTR ERVL -1 456 322 206 246 44 9 chr10 1988109 1988223 -143601065 + (TTATA)n Simple_repeat Simple_repeat 1 118 0 258 250 34 34 chr10 1988235 1988411 -143600877 + (TTATA)n Simple_repeat Simple_repeat 5 180 0 359 322 28 17 chr10 1988690 1988703 -143600585 + MIR SINE MIR 77 88 -174 1860 162 88 20 chr10 1988703 1989054 -143600234 + THE1C LTR MaLR 1 375 0 359 322 28 17 chr10 1989054 1989220 -143600068 + MIR SINE MIR 88 258 -4 2247 105 3 16 chr10 1989775 1990081 -143599207 + AluSx SINE Alu 1 302 -10 61 37 0 0 chr10 1991441 1991523 -143597765 + AT_rich Low_complexity Low_complexity 1 82 0 24 0 0 0 chr10 1992066 1992090 -143597198 + AT_rich Low_complexity Low_complexity 1 24 0 3316 109 10 41 chr10 1992101 1992616 -143596672 - L1MA1 LINE L1 -4 6298 5800 701 139 9 5 chr10 1992652 1992781 -143596507 - L1ME LINE L1 -358 5806 5676 541 92 26 13 chr10 1994286 1994362 -143594926 - MADE1 DNA Mariner 0 80 4 21 36 0 0 chr10 1994367 1994395 -143594893 + AT_rich Low_complexity Low_complexity 1 28 0 319 298 30 23 chr10 1994455 1994586 -143594702 - MER115 DNA AcHobo -11 682 551 859 140 0 22 chr10 1995654 1995790 -143593498 + AluSq/x SINE Alu 1 133 -180 2123 126 0 31 chr10 1995792 1996109 -143593179 + AluSx SINE Alu 1 307 -5 675 282 78 3 chr10 1997127 1997475 -143591813 - LTR16A LTR ERVL -20 430 57 23 68 0 0 chr10 1998263 1998307 -143590981 + AT_rich Low_complexity Low_complexity 1 44 0 836 263 127 58 chr10 1998891 1999324 -143589964 + MLT1C LTR MaLR 1 463 -4 1982 234 29 29 chr10 1999328 1999762 -143589526 + MLT1C-int LTR MaLR 1 414 -957 2001 112 63 0 chr10 1999762 2000047 -143589241 + AluSc SINE Alu 1 303 -6 1982 234 29 29 chr10 2000047 2000285 -143589003 + MLT1C-int LTR MaLR 414 650 -721 1106 256 86 14 chr10 2000356 2000704 -143588584 + MLT1C-int LTR MaLR 974 1346 -25 1088 228 66 89 chr10 2000715 2001185 -143588103 + MLT1C LTR MaLR 1 459 -8 213 338 0 0 chr10 2001228 2001305 -143587983 + MIR SINE MIR 67 143 -65 21 36 0 0 chr10 2002114 2002142 -143587146 + AT_rich Low_complexity Low_complexity 1 28 0 2469 101 51 25 chr10 2002238 2002593 -143586695 - THE1B LTR MaLR 0 364 1 2188 118 7 7 chr10 2002825 2003131 -143586157 - AluSc SINE Alu -3 306 1 29 28 0 0 chr10 2003359 2003395 -143585893 + AT_rich Low_complexity Low_complexity 1 36 0 259 269 219 17 chr10 2004859 2005097 -143584191 - L2 LINE L2 -2740 574 289 1432 247 31 3 chr10 2006778 2007130 -143582158 + MLT1A1 LTR MaLR 1 362 -3 1857 145 16 10 chr10 2007909 2007977 -143581311 - AluSx SINE Alu 0 589 523 1114 47 0 62 chr10 2007977 2008169 -143581119 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1857 145 16 10 chr10 2008169 2008496 -143580792 - AluSx SINE Alu -66 523 1 443 248 20 13 chr10 2010184 2010490 -143578798 + (TG)n Simple_repeat Simple_repeat 1 308 0 8052 135 2 1 chr10 2010820 2012036 -143577252 - L1P LINE L1 -1411 4735 3518 788 118 8 0 chr10 2012072 2012199 -143577089 + (GGAA)n Simple_repeat Simple_repeat 2 129 0 425 259 130 12 chr10 2013457 2013619 -143575669 - MLT1G1 LTR MaLR -388 207 27 1554 243 19 3 chr10 2013670 2014049 -143575239 + MLT1B LTR MaLR 4 388 -2 1988 145 3 0 chr10 2015863 2016170 -143573118 - AluSx SINE Alu 0 308 1 222 37 0 0 chr10 2016201 2016228 -143573060 + (TG)n Simple_repeat Simple_repeat 1 27 0 1658 243 39 0 chr10 2016642 2017054 -143572234 - MLT2B1 LTR ERVL -2 518 91 678 211 7 26 chr10 2017353 2017505 -143571783 - MLT2B2 LTR ERVL -366 149 1 722 188 12 6 chr10 2018902 2019233 -143570055 + (CAT)n Simple_repeat Simple_repeat 1 333 0 4962 208 52 18 chr10 2020193 2021332 -143567956 + L1MC2 LINE L1 19 1196 -5230 8057 239 35 41 chr10 2021338 2021742 -143567546 + L1MC2 LINE L1 2756 3161 -3463 2072 150 3 6 chr10 2021742 2022055 -143567233 + AluSx SINE Alu 1 312 0 8057 239 35 41 chr10 2022055 2024293 -143564995 + L1MC2 LINE L1 3161 5365 -1259 2191 98 10 14 chr10 2024293 2024588 -143564700 - AluSg1 SINE Alu -15 294 1 8057 239 35 41 chr10 2024588 2025391 -143563897 + L1MC2 LINE L1 5365 6172 -452 2807 180 19 6 chr10 2025391 2025908 -143563380 + L1MC1 LINE L1 5810 6333 0 22 35 0 0 chr10 2027001 2027030 -143562258 + AT_rich Low_complexity Low_complexity 1 29 0 7814 38 2 2 chr10 2027329 2028578 -143560710 - L1PA5 LINE L1 -4 6150 4904 339 286 78 39 chr10 2028822 2029077 -143560211 + MLT2E LTR ERVL 342 606 -22 237 337 21 11 chr10 2029309 2029404 -143559884 + MLT-int LTR MaLR 423 518 -1217 2206 116 0 0 chr10 2029654 2029946 -143559342 + AluSx SINE Alu 5 296 -16 226 188 62 10 chr10 2030638 2030734 -143558554 + (CCGCG)n Simple_repeat Simple_repeat 1 101 0 193 122 24 49 chr10 2030749 2030831 -143558457 + (CCGCG)n Simple_repeat Simple_repeat 4 83 0 206 115 19 39 chr10 2030831 2030883 -143558405 + C-rich Low_complexity Low_complexity 5 55 0 56 39 0 0 chr10 2030883 2030960 -143558328 + GC_rich Low_complexity Low_complexity 1 77 0 32 43 0 0 chr10 2030988 2031034 -143558254 + GC_rich Low_complexity Low_complexity 1 46 0 2294 129 8 6 chr10 2031062 2031418 -143557870 + MER4D LTR ERV1 547 903 0 1168 134 18 80 chr10 2031522 2031746 -143557542 + AluJb SINE Alu 82 291 -21 486 75 0 0 chr10 2031747 2031814 -143557474 + (TAGA)n Simple_repeat Simple_repeat 2 68 0 619 300 57 17 chr10 2032052 2032352 -143556936 - L1ME3A LINE L1 -301 5869 5558 258 301 16 78 chr10 2032367 2032420 -143556868 - L1ME3A LINE L1 -875 5271 5216 2047 115 7 3 chr10 2032420 2032706 -143556582 - AluSq SINE Alu -26 287 1 258 301 16 78 chr10 2032706 2032845 -143556443 - L1ME3A LINE L1 -930 5216 5091 336 48 0 0 chr10 2032978 2033020 -143556268 + (TG)n Simple_repeat Simple_repeat 2 43 0 313 319 39 16 chr10 2033055 2033237 -143556051 - L1ME3A LINE L1 -1199 4947 4762 21 0 0 0 chr10 2033389 2033410 -143555878 + AT_rich Low_complexity Low_complexity 1 21 0 559 86 0 0 chr10 2033457 2033527 -143555761 - U6 snRNA snRNA 0 107 38 358 309 88 10 chr10 2033529 2033733 -143555555 - L1ME3A LINE L1 -1369 4777 4558 393 276 116 36 chr10 2033737 2034038 -143555250 - L1ME3A LINE L1 -2458 3688 3364 1196 257 82 23 chr10 2034084 2034890 -143554398 - L1M4 LINE L1 -1390 5254 4362 388 137 0 82 chr10 2035015 2035088 -143554200 - MSTD LTR MaLR -328 68 2 237 261 26 26 chr10 2035089 2035204 -143554084 - L1 LINE L1 -2351 4293 4179 22 0 0 0 chr10 2035208 2035230 -143554058 + AT_rich Low_complexity Low_complexity 1 22 0 957 276 46 39 chr10 2035327 2035577 -143553711 - L1M4 LINE L1 -4543 2103 1847 222 37 0 0 chr10 2035577 2035604 -143553684 + (TTTC)n Simple_repeat Simple_repeat 4 30 0 957 276 46 39 chr10 2035604 2035787 -143553501 - L1M4 LINE L1 -4799 1847 1667 * 2064 272 25 53 chr10 2035784 2036541 -143552747 - L1M4 LINE L1 -5794 748 13 234 0 71 24 chr10 2036601 2036643 -143552645 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 478 346 62 62 chr10 2038349 2038565 -143550723 + HAL1 LINE L1 51 266 -2241 1700 177 17 7 chr10 2038565 2038864 -143550424 + AluJb SINE Alu 3 304 -8 478 346 62 62 chr10 2038864 2038965 -143550323 + HAL1 LINE L1 266 366 -2141 1390 246 33 87 chr10 2038965 2039515 -143549773 + MLT2B1 LTR ERVL 1 520 0 478 346 62 62 chr10 2039515 2040081 -143549207 + HAL1 LINE L1 365 935 -1572 825 167 24 0 chr10 2040090 2040216 -143549072 + AluJb SINE Alu 136 264 -48 225 0 0 0 chr10 2040217 2040242 -143549046 + (GA)n Simple_repeat Simple_repeat 2 26 0 319 258 154 49 chr10 2040251 2040354 -143548934 + HAL1 LINE L1 965 1056 -1451 267 253 0 48 chr10 2040354 2040379 -143548909 + AluYb8 SINE Alu 112 132 -176 2459 53 7 7 chr10 2040379 2040681 -143548607 + AluY SINE Alu 1 302 -9 319 258 154 49 chr10 2040437 2040858 -143548430 + HAL1 LINE L1 1056 1302 -1205 791 295 56 36 chr10 2040880 2041270 -143548018 + HAL1 LINE L1 1483 1880 -627 24 0 0 0 chr10 2041696 2041720 -143547568 + AT_rich Low_complexity Low_complexity 1 24 0 248 263 62 56 chr10 2041726 2041905 -143547383 + L1MC4a LINE L1 5594 5773 -2035 433 182 34 7 chr10 2041908 2042056 -143547232 + (TAGA)n Simple_repeat Simple_repeat 4 155 0 1191 133 0 0 chr10 2042148 2042321 -143546967 - AluSg/x SINE Alu -3 309 137 345 181 0 56 chr10 2042322 2042394 -143546894 - AluJ/FLAM SINE Alu -234 68 1 260 154 135 39 chr10 2042418 2042522 -143546766 + L1MC4a LINE L1 5866 5979 -1829 5288 37 2 0 chr10 2042879 2043469 -143545819 - LTR10C LTR ERV1 0 591 1 324 0 0 0 chr10 2044398 2044434 -143544854 + (CATA)n Simple_repeat Simple_repeat 2 37 0 679 54 0 21 chr10 2047232 2047325 -143541963 + L1PA5 LINE L1 6064 6154 0 779 90 90 45 chr10 2047325 2047457 -143541831 + L1PA16 LINE L1 6025 6164 -2 5274 228 54 65 chr10 2047500 2048444 -143540844 - L1MC3 LINE L1 -12 7773 6820 180 0 0 0 chr10 2048444 2048464 -143540824 + (TTTTG)n Simple_repeat Simple_repeat 1 20 0 5274 228 54 65 chr10 2048464 2048603 -143540685 - L1MC3 LINE L1 -965 6820 6681 1304 161 150 29 chr10 2048603 2048877 -143540411 + AluSg1 SINE Alu 1 307 -2 5274 228 54 65 chr10 2048877 2049548 -143539740 - L1MC3 LINE L1 -1104 6681 6037 1734 176 0 23 chr10 2050070 2050377 -143538911 - AluJo SINE Alu -12 300 1 330 328 174 44 chr10 2051244 2051860 -143537428 - L1MEd LINE L1 -5218 901 206 439 307 168 27 chr10 2052338 2052892 -143536396 + L1MC4 LINE L1 7270 7901 -141 189 0 0 0 chr10 2052894 2052915 -143536373 + (TA)n Simple_repeat Simple_repeat 2 22 0 209 225 28 14 chr10 2052952 2053023 -143536265 + GA-rich Low_complexity Low_complexity 1 72 0 21 57 0 0 chr10 2053097 2053132 -143536156 + AT_rich Low_complexity Low_complexity 1 35 0 576 326 80 32 chr10 2053275 2053669 -143535619 - L2 LINE L2 -1 3312 2890 935 84 0 53 chr10 2053669 2053859 -143535429 + (GGAA)n Simple_repeat Simple_repeat 1 180 0 576 326 80 32 chr10 2053859 2053937 -143535351 - L2 LINE L2 -423 2890 2817 1241 148 10 1 chr10 2054056 2056357 -143532931 + ALR/Alpha Satellite centromeric 1 2322 -21 1217 163 7 1 chr10 2056463 2059702 -143529586 + ALR/Alpha Satellite centromeric 1 3259 -28 1460 204 99 3 chr10 2060698 2061031 -143528257 + MLT1A1 LTR MaLR 1 365 0 233 206 0 15 chr10 2061627 2061695 -143527593 + CT-rich Low_complexity Low_complexity 5 71 0 489 355 37 25 chr10 2062231 2062555 -143526733 + L1MEc LINE L1 45 372 -6024 393 284 133 33 chr10 2062899 2063110 -143526178 + L1MEc LINE L1 786 1017 -5379 1950 288 114 52 chr10 2063136 2064314 -143524974 + L1MCc LINE L1 17 1306 -5278 1977 151 14 0 chr10 2064314 2064605 -143524683 - AluSx SINE Alu -17 295 1 1950 288 114 52 chr10 2064605 2065022 -143524266 + L1MCc LINE L1 1306 1696 -4888 1909 155 3 0 chr10 2065462 2065753 -143523535 - AluJb SINE Alu -20 292 1 359 270 203 31 chr10 2065768 2065931 -143523357 + HAL1 LINE L1 1701 1891 -616 2287 68 0 17 chr10 2066628 2066921 -143522367 + AluY SINE Alu 1 288 -23 1566 185 83 19 chr10 2067391 2067716 -143521572 - MER7A DNA MER2_type -2 344 1 273 306 25 64 chr10 2067767 2067924 -143521364 - MER5A DNA MER1_type -4 185 35 1934 50 0 25 chr10 2069390 2069632 -143519656 - L1PA8 LINE L1 -7 6165 5930 383 284 245 29 chr10 2070469 2070603 -143518685 + L2 LINE L2 1232 1336 -1978 279 0 0 0 chr10 2070603 2070634 -143518654 + (CA)n Simple_repeat Simple_repeat 1 31 0 383 284 245 29 chr10 2070634 2070707 -143518581 + L2 LINE L2 1336 1484 -1830 1206 135 6 0 chr10 2070722 2070900 -143518388 + AluSq SINE Alu 134 312 -1 981 256 49 47 chr10 2071594 2072027 -143517261 + L1M4 LINE L1 4597 5033 -1113 2787 22 0 10 chr10 2072027 2072341 -143516947 + AluY SINE Alu 1 311 0 981 256 49 47 chr10 2072341 2072418 -143516870 + L1M4 LINE L1 5033 5108 -1038 2596 147 18 35 chr10 2072690 2073072 -143516216 + MSTA LTR MaLR 1 388 -40 2251 104 3 0 chr10 2073072 2073361 -143515927 + AluSp SINE Alu 1 290 -23 306 0 0 0 chr10 2073364 2073398 -143515890 + (TAAA)n Simple_repeat Simple_repeat 2 35 0 2596 147 18 35 chr10 2073398 2073446 -143515842 + MSTA LTR MaLR 390 428 0 245 283 0 0 chr10 2073723 2073783 -143515505 + L2 LINE L2 3254 3313 0 365 167 0 0 chr10 2074714 2074774 -143514514 - L1MA5 LINE L1 -220 6080 6021 1267 118 10 20 chr10 2074792 2074996 -143514292 + L1MA5 LINE L1 6095 6296 -4 259 395 27 37 chr10 2075568 2075864 -143513424 + L3 LINE CR1 163 455 -1122 27 73 0 0 chr10 2076388 2076443 -143512845 + AT_rich Low_complexity Low_complexity 1 55 0 1210 229 85 15 chr10 2077243 2077645 -143511643 + MER31B LTR ERV1 1 430 -36 182 244 111 0 chr10 2078424 2078469 -143510819 + MIR SINE MIR 48 97 -165 339 233 282 6 chr10 2078776 2078939 -143510349 - L1MC4 LINE L1 -1115 6927 6720 403 252 8 31 chr10 2080534 2080661 -143508627 + MIR SINE MIR 2 125 -137 407 286 44 20 chr10 2080815 2081018 -143508270 - L2 LINE L2 -1391 1923 1716 225 194 11 43 chr10 2081028 2081121 -143508167 + (TG)n Simple_repeat Simple_repeat 2 91 0 4988 213 37 25 chr10 2083324 2084889 -143504399 - L1MC1 LINE L1 -18 6298 4720 247 248 0 59 chr10 2084888 2084989 -143504299 - L1MC1 LINE L1 -1817 4312 4218 * 619 122 0 0 chr10 2085229 2085311 -143503977 + AluSg/x SINE Alu 212 293 -17 1545 234 30 55 chr10 2085597 2086072 -143503216 + MLT1C LTR MaLR 5 467 0 214 315 36 27 chr10 2086490 2086601 -143502687 - MIR3 SINE MIR -28 180 69 298 250 40 0 chr10 2086990 2087066 -143502222 + MER45A DNA AcHobo 99 177 -1 726 309 105 69 chr10 2089072 2089225 -143500063 - L1MC1 LINE L1 -4870 1249 1103 367 19 19 19 chr10 2089225 2089278 -143500010 + (CA)n Simple_repeat Simple_repeat 2 54 0 726 309 105 69 chr10 2089278 2090445 -143498843 - L1MC1 LINE L1 -5016 1103 2 333 221 47 12 chr10 2090515 2090601 -143498687 + LTR16A LTR ERVL 53 141 -309 246 269 34 42 chr10 2090701 2090820 -143498468 + LTR16A LTR ERVL 303 420 -30 1882 168 0 13 chr10 2091225 2091523 -143497765 + AluSx SINE Alu 1 294 -18 22 80 0 0 chr10 2092303 2092353 -143496935 + AT_rich Low_complexity Low_complexity 1 50 0 1718 71 0 0 chr10 2092433 2092644 -143496644 - AluY SINE Alu -18 293 83 405 174 23 23 chr10 2092645 2092731 -143496557 + MLT1A2 LTR MaLR 127 212 -162 2035 118 0 57 chr10 2092744 2093058 -143496230 + AluSx SINE Alu 3 298 -14 430 341 32 23 chr10 2093122 2093339 -143495949 + MIR SINE MIR 44 262 0 603 222 98 31 chr10 2093841 2094035 -143495253 + MER3 DNA MER1_type 3 209 0 1746 122 34 27 chr10 2094348 2094643 -143494645 - AluSx SINE Alu -15 297 1 25 0 0 0 chr10 2096446 2096471 -143492817 + AT_rich Low_complexity Low_complexity 1 25 0 836 197 58 114 chr10 2096832 2097228 -143492060 - MLT1A2 LTR MaLR 0 374 1 662 301 119 13 chr10 2097902 2098290 -143490998 + MLT1G LTR MaLR 68 496 -94 915 308 32 22 chr10 2098899 2099302 -143489986 - MLT1I LTR MaLR -2 407 1 23 0 0 0 chr10 2099630 2099653 -143489635 + AT_rich Low_complexity Low_complexity 1 23 0 220 203 0 86 chr10 2101132 2101329 -143487959 + (GTGTG)n Simple_repeat Simple_repeat 1 180 0 339 273 19 73 chr10 2101587 2101740 -143487548 - MIR3 SINE MIR -67 141 10 615 142 20 81 chr10 2102980 2103128 -143486160 - L1M LINE L1 -775 5393 5255 251 154 0 19 chr10 2103574 2103626 -143485662 + CT-rich Low_complexity Low_complexity 1 51 0 375 283 71 45 chr10 2103966 2104164 -143485124 - L2 LINE L2 -10 3303 3101 1523 180 58 6 chr10 2104345 2104490 -143484798 - L1ME LINE L1 -712 5454 5318 276 30 0 0 chr10 2104490 2104523 -143484765 + (ATG)n Simple_repeat Simple_repeat 2 34 0 1523 180 58 6 chr10 2104523 2104779 -143484509 - L1ME LINE L1 -848 5318 5043 2959 185 100 14 chr10 2104785 2105086 -143484202 + L1MB1 LINE L1 5463 5737 -431 438 20 0 0 chr10 2105086 2105137 -143484151 + (TG)n Simple_repeat Simple_repeat 1 51 0 2959 185 100 14 chr10 2105137 2105484 -143483804 + L1MB1 LINE L1 5737 6167 -1 297 63 16 63 chr10 2105525 2105588 -143483700 + (GGA)n Simple_repeat Simple_repeat 3 62 0 306 194 0 16 chr10 2106326 2106388 -143482900 - MER31B LTR ERV1 0 466 406 2006 264 31 16 chr10 2107029 2107736 -143481552 - L1ME LINE L1 -2227 3919 3202 824 214 5 20 chr10 2107737 2107933 -143481355 - AluJo SINE Alu -1 311 119 2648 260 65 7 chr10 2107933 2108891 -143480397 - L1ME LINE L1 -2961 3185 2173 198 356 79 28 chr10 2110116 2110332 -143478956 + MIR SINE MIR 34 260 -2 396 0 0 0 chr10 2110973 2111017 -143478271 + (CA)n Simple_repeat Simple_repeat 2 45 0 237 163 0 0 chr10 2111017 2111066 -143478222 + (TA)n Simple_repeat Simple_repeat 1 49 0 2199 125 29 35 chr10 2111068 2111445 -143477843 + THE1C LTR MaLR 1 375 0 902 199 49 135 chr10 2112672 2113079 -143476209 + MLT1B LTR MaLR 1 372 -18 411 238 67 50 chr10 2113899 2114139 -143475149 - L1MC5 LINE L1 -102 7859 7616 35 0 0 0 chr10 2114339 2114374 -143474914 + AT_rich Low_complexity Low_complexity 1 35 0 25 95 0 0 chr10 2114401 2114475 -143474813 + AT_rich Low_complexity Low_complexity 1 74 0 1481 176 37 11 chr10 2115827 2116100 -143473188 - AluJo SINE Alu -32 280 1 33 0 0 0 chr10 2117336 2117369 -143471919 + AT_rich Low_complexity Low_complexity 1 33 0 21 36 0 0 chr10 2120223 2120251 -143469037 + AT_rich Low_complexity Low_complexity 1 28 0 225 230 0 0 chr10 2121607 2121733 -143467555 + (TG)n Simple_repeat Simple_repeat 2 127 0 437 218 6 0 chr10 2121776 2121946 -143467342 + (TG)n Simple_repeat Simple_repeat 2 172 0 22 0 0 0 chr10 2122725 2122747 -143466541 + AT_rich Low_complexity Low_complexity 1 22 0 297 330 26 0 chr10 2122894 2123009 -143466279 + MIR SINE MIR 30 147 -61 2194 85 0 30 chr10 2125231 2125536 -143463752 + AluSc SINE Alu 1 296 -13 458 262 25 98 chr10 2125655 2125899 -143463389 - L1MC3 LINE L1 -7 7778 7553 1404 201 28 14 chr10 2126325 2126614 -143462674 + AluJo SINE Alu 1 293 -19 22 0 0 0 chr10 2126636 2126658 -143462630 + AT_rich Low_complexity Low_complexity 1 22 0 186 167 0 0 chr10 2126680 2126716 -143462572 + GA-rich Low_complexity Low_complexity 2 37 0 1962 128 6 35 chr10 2126833 2127145 -143462143 - AluSx SINE Alu -9 303 1 198 269 13 51 chr10 2127878 2127956 -143461332 + MER5A DNA MER1_type 30 104 -85 2187 140 48 28 chr10 2129169 2129526 -143459762 + THE1B LTR MaLR 1 364 0 308 281 73 83 chr10 2130217 2130396 -143458892 + L1M4 LINE L1 3784 3963 -2183 2120 133 0 3 chr10 2130396 2130704 -143458584 + AluSx SINE Alu 1 307 -5 308 281 73 83 chr10 2130704 2130908 -143458380 + L1M4 LINE L1 3963 4163 -1983 2010 274 31 15 chr10 2131554 2132266 -143457022 - L1M4 LINE L1 -1017 5129 4407 188 234 0 16 chr10 2132266 2132330 -143456958 + CT-rich Low_complexity Low_complexity 1 63 0 921 189 98 20 chr10 2132346 2132428 -143456860 - L1MB3 LINE L1 -1 6182 6108 471 96 96 0 chr10 2132428 2132501 -143456787 + MADE1 DNA Mariner 1 80 0 921 189 98 20 chr10 2132501 2132672 -143456616 - L1MB3 LINE L1 -75 6108 5909 803 148 19 39 chr10 2133302 2133457 -143455831 - L1MA4 LINE L1 -16 6284 6133 534 185 99 0 chr10 2133789 2133940 -143455348 - L1MA4 LINE L1 -169 6131 5966 25 0 0 0 chr10 2136171 2136196 -143453092 + AT_rich Low_complexity Low_complexity 1 25 0 2562 58 3 0 chr10 2136288 2136597 -143452691 + AluY SINE Alu 1 310 -1 27 0 0 0 chr10 2136695 2136722 -143452566 + AT_rich Low_complexity Low_complexity 1 27 0 869 214 6 0 chr10 2136722 2136881 -143452407 - FRAM SINE Alu -19 157 1 1835 116 0 58 chr10 2139564 2139856 -143449432 + AluSx SINE Alu 32 306 -6 1672 173 13 86 chr10 2143577 2143832 -143445456 - MER39 LTR ERV1 -3 704 487 1578 119 13 0 chr10 2143832 2144058 -143445230 + AluSx SINE Alu 58 286 -26 1672 173 13 86 chr10 2144058 2144196 -143445092 - MER39 LTR ERV1 -220 487 340 926 266 43 14 chr10 2144276 2144554 -143444734 + MLT1F LTR MaLR 1 286 -256 277 273 23 68 chr10 2145714 2145890 -143443398 + (CAGCC)n Simple_repeat Simple_repeat 5 172 0 445 205 17 0 chr10 2146783 2146900 -143442388 + (TATG)n Simple_repeat Simple_repeat 2 120 0 238 194 32 16 chr10 2147426 2147488 -143441800 + GA-rich Low_complexity Low_complexity 2 64 0 1462 170 11 11 chr10 2149063 2149357 -143439931 + AluJo SINE Alu 12 305 0 251 333 52 26 chr10 2149642 2149795 -143439493 - MIR3 SINE MIR -33 175 19 1046 198 0 0 chr10 2149987 2150169 -143439119 - Tigger5 DNA MER2_type 0 2323 2142 187 333 17 0 chr10 2150979 2151039 -143438249 + L2 LINE L2 3200 3260 -12 231 61 0 0 chr10 2151905 2151938 -143437350 + (TG)n Simple_repeat Simple_repeat 2 34 0 1219 206 59 45 chr10 2152497 2153081 -143436207 + L1MCa LINE L1 1769 2452 -3974 782 237 59 0 chr10 2153092 2153278 -143436010 + MER74A LTR ERVL 43 239 -319 23 33 0 0 chr10 2153904 2153934 -143435354 + AT_rich Low_complexity Low_complexity 1 30 0 1817 113 0 12 chr10 2154422 2154679 -143434609 - AluSg SINE Alu -17 293 40 1106 65 7 0 chr10 2154681 2154819 -143434469 - AluSq/x SINE Alu -174 139 1 37 23 0 0 chr10 2155086 2155130 -143434158 + AT_rich Low_complexity Low_complexity 1 44 0 297 308 0 0 chr10 2155574 2155665 -143433623 + (TG)n Simple_repeat Simple_repeat 1 91 0 428 316 7 0 chr10 2155679 2155834 -143433454 + (TG)n Simple_repeat Simple_repeat 2 157 0 1578 99 130 16 chr10 2155921 2156202 -143433086 - AluSg1 SINE Alu 0 310 1 3332 110 18 18 chr10 2156447 2156602 -143432686 + MER75 DNA T2_type 3 157 -357 2128 99 11 0 chr10 2156602 2156907 -143432381 - AluSp SINE Alu 0 308 1 3332 110 18 18 chr10 2156907 2157248 -143432040 + MER75 DNA T2_type 156 500 -14 328 339 17 39 chr10 2157459 2157639 -143431649 - MER5B DNA MER1_type 0 178 3 3284 126 28 16 chr10 2159296 2159803 -143429485 - MER75 DNA T2_type -1 513 1 180 0 0 0 chr10 2160098 2160118 -143429170 + (CAAAA)n Simple_repeat Simple_repeat 1 20 0 479 239 68 106 chr10 2161195 2161517 -143427771 + MLT1H LTR MaLR 230 539 -10 25 31 0 0 chr10 2162043 2162075 -143427213 + AT_rich Low_complexity Low_complexity 1 32 0 25 31 0 0 chr10 2162544 2162576 -143426712 + AT_rich Low_complexity Low_complexity 1 32 0 1789 119 0 11 chr10 2162584 2162844 -143426444 + AluSc SINE Alu 1 257 -52 1856 142 57 0 chr10 2163461 2163792 -143425496 - L1MA5A LINE L1 0 6297 5948 777 232 130 72 chr10 2165405 2165750 -143423538 + MLT1D LTR MaLR 1 365 -140 2253 108 85 18 chr10 2166082 2166423 -143422865 + THE1B LTR MaLR 1 364 0 213 175 0 0 chr10 2168921 2168961 -143420327 + (CA)n Simple_repeat Simple_repeat 2 41 0 2141 120 0 10 chr10 2169092 2169108 -143420180 - AluSx SINE Alu -15 297 282 234 0 0 0 chr10 2169108 2169134 -143420154 + (TA)n Simple_repeat Simple_repeat 2 27 0 2141 120 0 10 chr10 2169134 2169417 -143419871 - AluSx SINE Alu -30 282 1 919 251 78 31 chr10 2169836 2170268 -143419020 + MLT1E LTR MaLR 46 593 0 24 0 0 0 chr10 2170999 2171023 -143418265 + AT_rich Low_complexity Low_complexity 1 24 0 506 339 13 34 chr10 2171974 2172210 -143417078 + HERV16 LTR ERVL 1317 1547 -3449 325 248 157 81 chr10 2172274 2172484 -143416804 + HERV16 LTR ERVL 1688 1913 -3083 601 337 28 17 chr10 2172667 2172955 -143416333 + HERV16 LTR ERVL 2221 2511 -3253 2004 135 0 0 chr10 2173557 2173858 -143415430 + AluSx SINE Alu 2 302 0 28 29 0 0 chr10 2174266 2174301 -143414987 + AT_rich Low_complexity Low_complexity 1 35 0 1796 137 4 0 chr10 2174312 2174575 -143414713 - AluSq SINE Alu -48 265 2 1363 194 19 0 chr10 2174575 2174832 -143414456 - L1PA16 LINE L1 -11 6155 5891 961 282 173 38 chr10 2175902 2176692 -143412596 + L2 LINE L2 1802 2698 -616 383 305 53 27 chr10 2176900 2177087 -143412201 + L2 LINE L2 3095 3286 -27 491 283 33 28 chr10 2177277 2177457 -143411831 + MIR SINE MIR 11 191 -71 205 204 61 34 chr10 2177780 2177927 -143411361 + (TTATA)n Simple_repeat Simple_repeat 2 152 0 27 29 0 0 chr10 2178059 2178093 -143411195 + AT_rich Low_complexity Low_complexity 1 34 0 820 133 44 0 chr10 2180349 2180483 -143408805 + Tigger1 DNA MER2_type 24 163 -2255 2160 167 33 31 chr10 2180483 2181032 -143408256 - MLT2A2 LTR ERVL 0 554 1 10566 131 52 31 chr10 2181043 2182010 -143407278 + Tigger1 DNA MER2_type 170 1193 -1225 1982 147 40 7 chr10 2182010 2182310 -143406978 + AluSx SINE Alu 1 310 -2 10566 131 52 31 chr10 2182310 2183135 -143406153 + Tigger1 DNA MER2_type 1193 1999 -419 1915 204 101 69 chr10 2183135 2183622 -143405666 + LTR9 LTR ERV1 1 512 -100 2544 54 3 19 chr10 2183622 2183938 -143405350 - AluY SINE Alu 0 311 1 1915 204 101 69 chr10 2183938 2184043 -143405245 + LTR9 LTR ERV1 512 612 0 * 2059 181 45 19 chr10 2184043 2184452 -143404836 + Tigger1 DNA MER2_type 1999 2418 0 1493 210 0 7 chr10 2184702 2184997 -143404291 + AluJo SINE Alu 1 293 -19 1908 176 0 3 chr10 2185287 2185599 -143403689 + AluSx SINE Alu 1 311 -1 261 0 0 0 chr10 2186053 2186082 -143403206 + (TG)n Simple_repeat Simple_repeat 1 29 0 288 105 0 0 chr10 2187256 2187294 -143401994 + Alu SINE Alu 1 38 -264 1115 190 26 4 chr10 2187383 2187615 -143401673 - MLT1B LTR MaLR -1 389 153 2479 35 6 26 chr10 2188835 2189146 -143400142 + AluY SINE Alu 1 305 -6 186 133 0 0 chr10 2189281 2189311 -143399977 + (CAAAA)n Simple_repeat Simple_repeat 5 34 0 4805 120 14 14 chr10 2189472 2190162 -143399126 - LTR8 LTR ERV1 0 691 2 26 0 0 0 chr10 2191096 2191122 -143398166 + AT_rich Low_complexity Low_complexity 1 26 0 227 349 9 9 chr10 2191612 2191718 -143397570 - MIR SINE MIR -108 154 49 2359 110 0 0 chr10 2191728 2192037 -143397251 - AluSq SINE Alu -4 309 1 2499 233 14 28 chr10 2192432 2193079 -143396209 - L1MC3 LINE L1 -7 7847 7210 2759 243 67 23 chr10 2193098 2194007 -143395281 - L1MC3 LINE L1 -743 5472 5001 1858 161 0 3 chr10 2194007 2194335 -143394953 - AluSx SINE Alu 0 327 1 2759 243 67 23 chr10 2194335 2195287 -143394001 - L1MC3 LINE L1 -1214 5001 4092 1703 272 127 41 chr10 2195288 2196997 -143392291 - L1MC3 LINE L1 -3712 2503 812 2216 109 3 3 chr10 2196997 2197308 -143391980 + AluSx SINE Alu 1 311 -1 1703 272 127 41 chr10 2197308 2197561 -143391727 - L1MC3 LINE L1 -5403 812 582 668 244 51 25 chr10 2197542 2197739 -143391549 - L1MC3 LINE L1 -6155 241 40 * 1455 151 4 21 chr10 2199398 2199637 -143389651 + AluSg/x SINE Alu 71 305 -7 759 180 0 16 chr10 2200502 2200685 -143388603 + (CA)n Simple_repeat Simple_repeat 1 180 0 585 312 42 64 chr10 2203314 2203766 -143385522 - LTR16A1 LTR ERVL 0 457 16 2027 204 24 5 chr10 2204067 2204483 -143384805 - MSTB LTR MaLR -2 424 1 264 263 50 0 chr10 2204487 2204567 -143384721 - L1MC/D LINE L1 -1920 5888 5805 23 0 0 0 chr10 2205363 2205386 -143383902 + AT_rich Low_complexity Low_complexity 1 23 0 350 239 20 107 chr10 2206592 2206789 -143382499 + HAL1 LINE L1 1384 1563 -944 552 185 0 0 chr10 2207090 2207182 -143382106 - AluJ/FLAM SINE Alu -220 92 1 2004 101 42 14 chr10 2207948 2208236 -143381052 + AluSx SINE Alu 1 296 -16 2309 206 37 85 chr10 2209196 2209683 -143379605 - L1MC2 LINE L1 -396 5948 5497 2051 138 10 0 chr10 2209683 2209973 -143379315 - AluSg SINE Alu -17 293 1 2309 206 37 85 chr10 2209973 2210346 -143378942 - L1MC2 LINE L1 -847 5497 5107 2273 71 0 0 chr10 2210750 2211071 -143378217 + AluY SINE Alu 1 321 0 2132 104 0 4 chr10 2211467 2211747 -143377541 - AluSq SINE Alu -34 279 1 203 363 29 0 chr10 2211861 2211963 -143377325 - MIR SINE MIR -58 204 100 1601 233 25 0 chr10 2212000 2212407 -143376881 - MER47B DNA MER2_type 0 418 2 274 243 21 95 chr10 2212938 2213181 -143376107 + L1MC5 LINE L1 7549 7773 -188 191 122 0 49 chr10 2213194 2213235 -143376053 + (GAAA)n Simple_repeat Simple_repeat 4 42 0 201 365 0 32 chr10 2213831 2213987 -143375301 + (CAATG)n Simple_repeat Simple_repeat 3 153 0 306 234 24 24 chr10 2214249 2214541 -143374747 + GA-rich Low_complexity Low_complexity 1 292 0 180 0 0 0 chr10 2215437 2215457 -143373831 + (TA)n Simple_repeat Simple_repeat 2 21 0 2191 115 0 0 chr10 2215463 2215758 -143373530 - AluSq SINE Alu -18 295 1 908 233 125 15 chr10 2215768 2216111 -143373177 - L1MC3 LINE L1 -1 7784 7404 3279 245 108 26 chr10 2216556 2217979 -143371309 - L1MC3 LINE L1 -335 7450 5919 202 314 115 32 chr10 2218240 2218396 -143370892 + L2 LINE L2 2614 2782 -532 754 194 22 0 chr10 2218415 2218554 -143370734 - FLAM_C SINE Alu 0 143 2 3966 24 0 0 chr10 2218563 2219024 -143370264 - L1PA3 LINE L1 0 6155 5695 32 26 0 0 chr10 2219086 2219125 -143370163 + AT_rich Low_complexity Low_complexity 1 39 0 296 195 23 35 chr10 2220546 2220633 -143368655 - MER53 DNA DNA -1 188 103 512 175 0 0 chr10 2221122 2221219 -143368069 - L1MA5A LINE L1 -10 6287 6191 753 239 157 11 chr10 2221668 2221948 -143367340 + MER33 DNA MER1_type 1 321 -3 1135 184 4 12 chr10 2222298 2222543 -143366745 - L1MA6 LINE L1 -1 6299 6057 295 109 0 0 chr10 2222568 2222614 -143366674 + L1M2 LINE L1 5444 5489 -811 1943 106 7 3 chr10 2222620 2222951 -143366337 + AluSx SINE Alu 1 332 0 529 329 112 47 chr10 2223442 2224276 -143365012 + L1M4 LINE L1 2225 3112 -3034 1779 106 13 0 chr10 2224455 2224690 -143364598 + AluSx SINE Alu 64 301 -11 424 287 103 0 chr10 2224976 2225112 -143364176 + MIR SINE MIR 4 153 -109 323 322 44 16 chr10 2227059 2227242 -143362046 - MER46C DNA MER2_type -46 292 105 298 176 22 33 chr10 2227518 2227609 -143361679 + (TA)n Simple_repeat Simple_repeat 1 90 0 28 61 0 0 chr10 2227644 2227693 -143361595 + AT_rich Low_complexity Low_complexity 1 49 0 302 136 64 16 chr10 2227705 2227830 -143361458 + (TA)n Simple_repeat Simple_repeat 2 132 0 297 133 20 41 chr10 2227869 2227967 -143361321 + (TA)n Simple_repeat Simple_repeat 1 96 0 395 196 68 7 chr10 2227981 2228249 -143361039 + (TA)n Simple_repeat Simple_repeat 1 284 0 24 32 0 0 chr10 2228375 2228406 -143360882 + AT_rich Low_complexity Low_complexity 1 31 0 243 61 0 0 chr10 2230150 2230183 -143359105 + (CAT)n Simple_repeat Simple_repeat 1 33 0 1428 250 57 38 chr10 2230320 2231456 -143357832 + L1MCb LINE L1 475 1638 -4885 1815 142 40 7 chr10 2231456 2231752 -143357536 + AluSx SINE Alu 1 306 -6 1428 250 57 38 chr10 2231752 2231788 -143357500 + L1MCb LINE L1 1638 1672 -4851 1246 222 104 21 chr10 2231786 2232265 -143357023 + L1M4 LINE L1 5312 5828 -346 * 2298 222 12 42 chr10 2232272 2232917 -143356371 - L1 LINE L1 -3311 2835 2210 219 338 95 0 chr10 2233284 2233358 -143355930 - L2 LINE L2 -38 3234 3154 258 254 0 0 chr10 2234280 2234347 -143354941 + (TG)n Simple_repeat Simple_repeat 2 68 0 1638 177 0 38 chr10 2234584 2234901 -143354387 + AluJo SINE Alu 1 305 -7 23 33 0 0 chr10 2234967 2234997 -143354291 + AT_rich Low_complexity Low_complexity 1 30 0 23 33 0 0 chr10 2235965 2235995 -143353293 + AT_rich Low_complexity Low_complexity 1 30 0 7852 13 7 0 chr10 2238201 2239222 -143350066 - L1PA2 LINE L1 0 6155 5133 5001 191 31 20 chr10 2241895 2243476 -143345812 + L1MC1 LINE L1 4732 6333 0 340 216 0 0 chr10 2243491 2243565 -143345723 + AluJ/FRAM SINE Alu 228 301 -1 27 0 0 0 chr10 2244338 2244365 -143344923 + AT_rich Low_complexity Low_complexity 1 27 0 22 35 0 0 chr10 2244404 2244433 -143344855 + AT_rich Low_complexity Low_complexity 1 29 0 24 53 0 0 chr10 2244701 2244739 -143344549 + AT_rich Low_complexity Low_complexity 1 38 0 381 307 135 5 chr10 2245566 2245781 -143343507 + MLT1J1 LTR MaLR 202 444 -2 290 314 44 7 chr10 2246246 2246383 -143342905 + MLT1J2 LTR MaLR 47 188 -262 26 30 0 0 chr10 2246597 2246630 -143342658 + AT_rich Low_complexity Low_complexity 1 33 0 1947 104 11 31 chr10 2246930 2247217 -143342071 - AluSg SINE Alu -3 307 27 280 179 0 0 chr10 2247306 2247362 -143341926 - MER4-int LTR ERV1 -5431 1167 1112 212 196 62 21 chr10 2247365 2247462 -143341826 + (CATG)n Simple_repeat Simple_repeat 3 103 0 * 354 297 0 0 chr10 2247442 2247587 -143341701 + (CA)n Simple_repeat Simple_repeat 1 145 0 398 286 183 43 chr10 2248928 2249463 -143339825 + L2 LINE L2 2366 2975 -339 189 333 10 62 chr10 2249681 2249777 -143339511 + L2 LINE L2 3142 3232 -40 898 246 36 70 chr10 2250527 2250884 -143338404 - MLT1A2 LTR MaLR 0 374 30 21 0 0 0 chr10 2251102 2251123 -143338165 + AT_rich Low_complexity Low_complexity 1 21 0 361 168 77 0 chr10 2251264 2251419 -143337869 + (TA)n Simple_repeat Simple_repeat 2 168 0 299 333 33 39 chr10 2251976 2252312 -143336976 + L1ME4a LINE L1 5540 5873 -248 2164 144 44 47 chr10 2252644 2253027 -143336261 + MER83 LTR ERV1 1 382 -66 26 0 0 0 chr10 2253027 2253053 -143336235 + AT_rich Low_complexity Low_complexity 1 26 0 1207 211 20 56 chr10 2253237 2253592 -143335696 - MLT1A1 LTR MaLR 0 365 24 752 208 119 36 chr10 2254558 2254752 -143334536 - L1MDb LINE L1 -5342 1201 972 2335 113 52 19 chr10 2254752 2255115 -143334173 + THE1C LTR MaLR 1 375 0 752 208 119 36 chr10 2255115 2255223 -143334065 - L1MDb LINE L1 -5571 972 874 327 286 112 29 chr10 2255431 2255637 -143333651 - L1MDb LINE L1 -6146 394 172 1114 58 0 0 chr10 2255677 2255814 -143333474 + AluY SINE Alu 172 308 -3 26 30 0 0 chr10 2256531 2256564 -143332724 + AT_rich Low_complexity Low_complexity 1 33 0 251 306 8 40 chr10 2256617 2256741 -143332547 - L1MEc LINE L1 -4646 1750 1631 197 194 0 15 chr10 2257729 2257796 -143331492 + GA-rich Low_complexity Low_complexity 1 66 0 671 132 14 14 chr10 2257834 2257978 -143331310 + GA-rich Low_complexity Low_complexity 4 147 0 358 362 6 17 chr10 2258037 2258214 -143331074 - MER5B DNA MER1_type 0 178 4 334 234 215 24 chr10 2258241 2258446 -143330842 - L2 LINE L2 -534 2780 2537 1335 249 22 11 chr10 2258483 2258848 -143330440 + MLT1A2 LTR MaLR 6 374 0 325 264 141 25 chr10 2258855 2259018 -143330270 - L2 LINE L2 -803 2511 2330 551 96 0 48 chr10 2260304 2260336 -143328952 + MADE1 DNA Mariner 2 34 -46 2381 78 0 44 chr10 2260336 2260656 -143328632 - AluY SINE Alu -5 306 1 551 96 0 48 chr10 2260656 2260706 -143328582 + MADE1 DNA Mariner 34 80 0 213 354 50 43 chr10 2260852 2261013 -143328275 + MIR SINE MIR 76 237 -25 2420 103 0 0 chr10 2262442 2262754 -143326534 - AluSx SINE Alu 0 312 1 327 287 21 64 chr10 2264357 2264545 -143324743 + L2 LINE L2 3031 3210 -103 2844 77 31 0 chr10 2265263 2265615 -143323673 + THE1B LTR MaLR 1 363 -1 627 235 92 0 chr10 2267755 2267908 -143321380 + MER5A DNA MER1_type 4 170 -19 186 43 0 0 chr10 2268560 2268583 -143320705 + (TTC)n Simple_repeat Simple_repeat 2 24 0 905 200 0 6 chr10 2269242 2269417 -143319871 + AluJb SINE Alu 137 310 -2 22 35 0 0 chr10 2271034 2271063 -143318225 + AT_rich Low_complexity Low_complexity 1 29 0 4168 185 39 22 chr10 2271070 2271870 -143317418 - L1MA6 LINE L1 -1 6299 5483 2041 125 3 29 chr10 2271870 2272183 -143317105 - AluSx SINE Alu -7 305 1 4168 185 39 22 chr10 2272183 2272231 -143317057 - L1MA6 LINE L1 -817 5483 5437 2305 137 91 10 chr10 2272377 2272771 -143316517 - MSTB LTR MaLR 0 426 1 256 0 0 71 chr10 2275299 2275341 -143313947 + (TTTTTA)n Simple_repeat Simple_repeat 2 40 0 2055 140 156 11 chr10 2275352 2275724 -143313564 + MSTA LTR MaLR 2 427 -1 1533 195 7 0 chr10 2275724 2276001 -143313287 - AluJb SINE Alu -33 279 1 320 69 379 0 chr10 2276010 2276068 -143313220 + MADE1 DNA Mariner 1 80 0 22 0 0 0 chr10 2276699 2276721 -143312567 + AT_rich Low_complexity Low_complexity 1 22 0 924 252 133 44 chr10 2276778 2277370 -143311918 + MER114 LTR ERV 1 645 -3 1595 216 54 43 chr10 2277540 2277984 -143311304 - MSTB2 LTR MaLR -2 455 7 1295 224 108 30 chr10 2278279 2278614 -143310674 - MLT1A2 LTR MaLR -13 361 1 387 330 45 6 chr10 2279675 2279851 -143309437 + L2 LINE L2 2229 2411 -903 484 210 31 6 chr10 2279915 2280077 -143309211 + CT-rich Low_complexity Low_complexity 2 167 0 518 304 136 50 chr10 2280148 2280797 -143308491 + L2 LINE L2 2587 3285 -28 1152 196 31 13 chr10 2281298 2281522 -143307766 - MLT1A1 LTR MaLR -2 363 136 426 205 0 0 chr10 2281531 2281614 -143307674 - MLT1A1 LTR MaLR -171 194 112 1010 177 15 35 chr10 2281620 2281818 -143307470 - MLT1A1 LTR MaLR -171 194 1 1293 236 54 0 chr10 2281835 2282186 -143307102 - L1MC3 LINE L1 0 7785 7416 * 3879 247 74 43 chr10 2282183 2282906 -143306382 - L1MC3 LINE L1 -759 5387 4687 1551 184 33 23 chr10 2282906 2283205 -143306083 - AluJb SINE Alu -10 302 1 3879 247 74 43 chr10 2283205 2285342 -143303946 - L1MC3 LINE L1 -1459 4687 3729 1336 220 34 54 chr10 2285344 2285822 -143303466 + L1ME1 LINE L1 2752 3219 -2927 22 0 0 0 chr10 2287023 2287045 -143302243 + AT_rich Low_complexity Low_complexity 1 22 0 216 336 14 41 chr10 2287093 2287178 -143302110 + MIR SINE MIR 111 192 -70 2161 125 7 0 chr10 2287178 2287474 -143301814 + AluSx SINE Alu 1 298 -14 216 336 14 41 chr10 2287474 2287534 -143301754 + MIR SINE MIR 192 252 -10 2087 273 41 19 chr10 2287893 2288622 -143300666 + L1ME1 LINE L1 5418 6162 -4 1817 168 21 71 chr10 2289099 2289481 -143299807 - THE1B LTR MaLR -1 363 1 208 219 78 16 chr10 2289554 2289618 -143299670 - L3 LINE CR1 -1304 273 206 186 337 61 18 chr10 2289659 2289822 -143299466 - MIR SINE MIR -70 192 23 228 200 0 0 chr10 2290707 2290777 -143298511 + (TA)n Simple_repeat Simple_repeat 1 70 0 355 254 58 96 chr10 2292373 2292561 -143296727 - L1ME3 LINE L1 0 6170 5983 2301 101 10 0 chr10 2292561 2292867 -143296421 - AluSx SINE Alu -3 309 1 355 254 58 96 chr10 2292867 2292982 -143296306 - L1ME3 LINE L1 -187 5983 5865 252 168 69 46 chr10 2293150 2293323 -143295965 + (CACTT)n Simple_repeat Simple_repeat 4 180 0 22 0 0 0 chr10 2294281 2294303 -143294985 + AT_rich Low_complexity Low_complexity 1 22 0 2090 128 3 7 chr10 2295012 2295310 -143293978 - AluSx SINE Alu -2 310 14 1250 183 57 103 chr10 2295895 2296196 -143293092 - AluJb SINE Alu -14 288 2 21 0 0 0 chr10 2296314 2296335 -143292953 + AT_rich Low_complexity Low_complexity 1 21 0 722 188 33 13 chr10 2296689 2296859 -143292429 - MLT1A1 LTR MaLR -4 405 215 225 346 77 10 chr10 2297033 2297137 -143292151 - L2 LINE L2 0 3272 3162 190 301 124 42 chr10 2298309 2298690 -143290598 - L2 LINE L2 -15 3298 2837 1077 229 47 28 chr10 2298690 2299053 -143290235 + MLT1A2 LTR MaLR 1 370 -4 190 301 124 42 chr10 2299053 2299090 -143290198 - L2 LINE L2 -476 2837 2804 286 224 142 30 chr10 2299226 2299360 -143289928 - L2 LINE L2 -513 2801 2653 1910 139 30 3 chr10 2299421 2299716 -143289572 + AluSx SINE Alu 1 303 -9 683 250 51 21 chr10 2299720 2299985 -143289303 - MER58 DNA MER1_type -36 2384 18 800 363 148 9 chr10 2300005 2300843 -143288445 - L2 LINE L2 -645 2669 1716 2029 221 0 3 chr10 2301094 2301471 -143287817 + MER44D DNA MER2_type 9 439 -166 1218 218 29 39 chr10 2301471 2301778 -143287510 - MLT2B3 LTR ERVL 0 554 251 837 214 0 6 chr10 2301895 2302063 -143287225 + MER44D DNA MER2_type 439 605 0 5530 174 26 17 chr10 2302492 2303192 -143286096 - L1MC1 LINE L1 -5 6328 5610 2007 212 15 5 chr10 2303192 2303583 -143285705 - MSTD LTR MaLR 0 396 2 5530 174 26 17 chr10 2303583 2303991 -143285297 - L1MC1 LINE L1 -723 5610 5207 914 153 10 89 chr10 2303991 2304194 -143285094 - AluJb SINE Alu -5 307 121 652 200 205 0 chr10 2304659 2304854 -143284434 + MER46A DNA MER2_type 2 236 0 27 49 0 0 chr10 2305280 2305321 -143283967 + AT_rich Low_complexity Low_complexity 1 41 0 212 0 36 0 chr10 2307718 2307746 -143281542 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 315 379 15 15 chr10 2308012 2308281 -143281007 + ERVL LTR ERVL 3236 3504 -2260 1392 301 52 7 chr10 2309750 2310344 -143278944 + L1M4 LINE L1 4142 4762 -1384 764 206 12 0 chr10 2310346 2310516 -143278772 - L1MC1 LINE L1 -1248 4898 4727 1223 207 48 42 chr10 2310533 2310910 -143278378 + MLT1D LTR MaLR 21 399 -106 728 201 49 0 chr10 2310912 2311056 -143278232 - L1MB1 LINE L1 -1 6167 6017 1955 53 0 0 chr10 2311104 2311332 -143277956 - L1PA5 LINE L1 0 6154 5927 989 138 20 31 chr10 2311342 2311537 -143277751 + L1MA4 LINE L1 6108 6300 0 239 311 118 7 chr10 2311582 2311717 -143277571 + MIR SINE MIR 110 259 -3 222 164 49 16 chr10 2311729 2311790 -143277498 + (TTATG)n Simple_repeat Simple_repeat 3 65 0 285 344 0 0 chr10 2312312 2312405 -143276883 + MIR SINE MIR 52 144 -64 855 161 0 60 chr10 2312485 2312684 -143276604 - L1MA4 LINE L1 -6 6294 6108 704 196 42 0 chr10 2312738 2312881 -143276407 + L1MB1 LINE L1 6019 6167 -1 24 0 0 0 chr10 2313090 2313114 -143276174 + AT_rich Low_complexity Low_complexity 1 24 0 2119 190 33 13 chr10 2313857 2314251 -143275037 - MER57A LTR ERV1 -1 402 1 1297 185 30 26 chr10 2314866 2315039 -143274249 - AluJo SINE Alu -9 303 127 185 83 28 0 chr10 2315039 2315075 -143274213 + (TTTA)n Simple_repeat Simple_repeat 3 39 0 1297 185 30 26 chr10 2315075 2315203 -143274085 - AluJo SINE Alu -185 127 1 2795 178 20 79 chr10 2316378 2317026 -143272262 + LTR9 LTR ERV1 3 612 0 2037 119 1 48 chr10 2317284 2317818 -143271470 - MER4A LTR ERV1 0 664 1 3610 163 16 21 chr10 2318818 2319558 -143269730 + LTR1B LTR ERV1 1 826 0 30 45 0 0 chr10 2321039 2321083 -143268205 + AT_rich Low_complexity Low_complexity 1 44 0 2403 74 3 7 chr10 2321593 2321903 -143267385 - AluY SINE Alu -2 309 1 1919 136 0 3 chr10 2322915 2323202 -143266086 + AluSx SINE Alu 23 308 -4 21 57 0 0 chr10 2323275 2323310 -143265978 + AT_rich Low_complexity Low_complexity 1 35 0 663 223 54 45 chr10 2324467 2324709 -143264579 + LTR40a LTR ERVL 212 512 -7 592 255 74 10 chr10 2325931 2326176 -143263112 - MIR SINE MIR 0 262 3 21 0 0 0 chr10 2326827 2326848 -143262440 + AT_rich Low_complexity Low_complexity 1 21 0 2230 108 0 0 chr10 2328525 2328813 -143260475 - AluSx SINE Alu -24 288 1 207 257 239 0 chr10 2328871 2328980 -143260308 - MIR SINE MIR -46 216 82 203 367 73 0 chr10 2329303 2329412 -143259876 - MIR SINE MIR -111 151 35 22 109 0 0 chr10 2330125 2330217 -143259071 + AT_rich Low_complexity Low_complexity 1 92 0 715 261 30 0 chr10 2330372 2330571 -143258717 - L1MC3 LINE L1 -21 7764 7560 3779 160 34 9 chr10 2330582 2331256 -143258032 + MER50 LTR ERV1 12 702 -32 2249 243 57 16 chr10 2331266 2331953 -143257335 - L1MC3 LINE L1 -221 7564 6850 317 222 10 0 chr10 2332002 2332101 -143257187 + (TG)n Simple_repeat Simple_repeat 1 100 0 1680 231 110 27 chr10 2332101 2332664 -143256624 - L1MC3 LINE L1 -928 6857 6248 3570 113 21 25 chr10 2333441 2333999 -143255289 + MER4B LTR ERV1 1 556 -54 286 77 0 0 chr10 2333995 2334034 -143255254 + Alu SINE Alu 13 51 -252 * 486 211 0 46 chr10 2334048 2334157 -143255131 - LTR62 LTR ERVK -610 109 6 1434 215 95 50 chr10 2334825 2335290 -143253998 - MER66B LTR ERV1 0 486 1 1512 130 65 0 chr10 2335784 2336000 -143253288 - MER30 DNA MER1_type 0 230 1 23 33 0 0 chr10 2337480 2337510 -143251778 + AT_rich Low_complexity Low_complexity 1 30 0 236 321 131 0 chr10 2337518 2337655 -143251633 + L1M4 LINE L1 3731 3885 -2261 252 0 0 0 chr10 2338010 2338038 -143251250 + (TTTA)n Simple_repeat Simple_repeat 2 29 0 433 244 0 0 chr10 2338316 2338402 -143250886 - U6 snRNA snRNA -19 88 3 606 239 100 13 chr10 2338404 2338634 -143250654 + MLT2D LTR ERVL 100 349 -65 575 138 54 6 chr10 2338648 2338815 -143250473 + (TCTA)n Simple_repeat Simple_repeat 1 175 0 376 163 72 0 chr10 2338882 2339048 -143250240 + (TCTA)n Simple_repeat Simple_repeat 1 178 0 509 123 71 0 chr10 2339092 2339247 -143250041 + (TCTA)n Simple_repeat Simple_repeat 1 166 0 633 121 55 0 chr10 2339317 2339482 -143249806 + (TCTA)n Simple_repeat Simple_repeat 1 174 0 2125 135 0 0 chr10 2340341 2340652 -143248636 + AluSx SINE Alu 1 311 -1 1298 247 34 29 chr10 2340689 2341069 -143248219 - MLT1B LTR MaLR -8 382 1 362 285 125 0 chr10 2342133 2342277 -143247011 + LTR16C LTR ERVL 88 249 -242 323 259 74 53 chr10 2342282 2342471 -143246817 + L1ME3A LINE L1 5965 6157 -13 21 0 0 0 chr10 2342472 2342493 -143246795 + AT_rich Low_complexity Low_complexity 1 21 0 2804 115 0 0 chr10 2343409 2343773 -143245515 - THE1B LTR MaLR 0 364 1 25 0 0 0 chr10 2344006 2344031 -143245257 + AT_rich Low_complexity Low_complexity 1 25 0 2105 127 7 0 chr10 2345162 2345462 -143243826 - AluSx SINE Alu -10 302 1 2374 79 0 3 chr10 2346285 2346590 -143242698 - AluY SINE Alu -7 304 1 226 163 0 20 chr10 2346754 2346803 -143242485 + A-rich Low_complexity Low_complexity 1 48 0 22 0 0 0 chr10 2347510 2347532 -143241756 + AT_rich Low_complexity Low_complexity 1 22 0 2136 136 101 20 chr10 2347747 2348143 -143241145 + MSTA LTR MaLR 1 428 0 441 281 60 27 chr10 2348606 2348909 -143240379 - MLT1I LTR MaLR -27 382 76 232 171 57 0 chr10 2348978 2349048 -143240240 + C-rich Low_complexity Low_complexity 3 76 0 23 0 0 0 chr10 2350655 2350678 -143238610 + AT_rich Low_complexity Low_complexity 1 23 0 273 75 0 0 chr10 2350811 2350851 -143238437 + (TG)n Simple_repeat Simple_repeat 1 40 0 453 289 102 49 chr10 2350950 2351121 -143238167 - HAL1b LINE L1 -224 1124 964 1577 199 13 13 chr10 2351121 2351432 -143237856 + AluJb SINE Alu 1 311 -1 453 289 102 49 chr10 2351432 2351934 -143237354 - HAL1b LINE L1 -384 964 415 1394 45 0 6 chr10 2352034 2352213 -143237075 + (GAA)n Simple_repeat Simple_repeat 2 179 0 1427 190 16 57 chr10 2352213 2352581 -143236707 - MLT1B LTR MaLR -37 353 1 204 236 34 34 chr10 2353093 2353182 -143236106 + T-rich Low_complexity Low_complexity 2 90 0 22 35 0 0 chr10 2353722 2353751 -143235537 + AT_rich Low_complexity Low_complexity 1 29 0 198 71 0 0 chr10 2354525 2354553 -143234735 + (CA)n Simple_repeat Simple_repeat 2 29 0 244 247 82 103 chr10 2354786 2355078 -143234210 - MLT1H LTR MaLR -214 335 50 1817 194 26 11 chr10 2356974 2357356 -143231932 + MLT1B LTR MaLR 3 390 0 815 137 0 23 chr10 2357499 2357630 -143231658 + FLAM_C SINE Alu 5 132 -11 188 275 110 28 chr10 2358621 2358730 -143230558 - MIR SINE MIR 0 262 145 308 333 111 28 chr10 2358741 2358993 -143230295 - HAL1 LINE L1 -1003 1504 1232 692 220 0 0 chr10 2361762 2361903 -143227385 + FLAM_C SINE Alu 3 143 0 1624 40 0 0 chr10 2361985 2362183 -143227105 + L1PA2 LINE L1 5958 6155 0 279 0 0 0 chr10 2362434 2362465 -143226823 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 189 0 0 0 chr10 2362816 2362837 -143226451 + (TTAA)n Simple_repeat Simple_repeat 4 24 0 1231 118 0 0 chr10 2363461 2363630 -143225658 + AluSg/x SINE Alu 131 299 -13 307 341 142 37 chr10 2363952 2364275 -143225013 + HAL1 LINE L1 1414 1770 -737 2421 81 0 3 chr10 2364960 2365268 -143224020 + AluY SINE Alu 1 307 -4 1479 291 97 15 chr10 2365509 2366357 -143222931 + L1M4b LINE L1 44 960 -5899 419 250 23 0 chr10 2366351 2366483 -143222805 - L1M4 LINE L1 -4853 1689 1555 * 228 185 0 19 chr10 2366503 2366557 -143222731 + (TA)n Simple_repeat Simple_repeat 2 54 0 482 97 97 0 chr10 2368146 2368239 -143221049 + L1MA4A LINE L1 6197 6298 -5 2091 99 0 3 chr10 2368492 2368822 -143220466 + AluY SINE Alu 1 329 0 185 340 10 30 chr10 2368822 2368922 -143220366 - MIR SINE MIR -1 261 164 22 0 0 0 chr10 2368934 2368956 -143220332 + AT_rich Low_complexity Low_complexity 1 22 0 291 204 44 26 chr10 2369374 2369487 -143219801 + L1M4 LINE L1 4324 4438 -1708 1965 147 10 6 chr10 2369704 2370016 -143219272 - AluSq SINE Alu 0 313 1 609 266 83 63 chr10 2370018 2370367 -143218921 - L1MEc LINE L1 -4183 2213 1858 186 43 0 0 chr10 2370544 2370567 -143218721 + (CTTG)n Simple_repeat Simple_repeat 1 23 0 1100 191 0 59 chr10 2370675 2370911 -143218377 - AluJb SINE Alu 0 312 91 2188 131 48 14 chr10 2370986 2371338 -143217950 + THE1B LTR MaLR 1 364 0 9992 110 20 18 chr10 2371338 2372907 -143216381 + THE1B-int LTR MaLR 1 1572 -8 2163 124 48 28 chr10 2372914 2373269 -143216019 + THE1B LTR MaLR 1 362 -2 213 154 0 0 chr10 2373330 2373369 -143215919 + CT-rich Low_complexity Low_complexity 2 40 0 23 54 0 0 chr10 2373403 2373440 -143215848 + AT_rich Low_complexity Low_complexity 1 37 0 24 0 0 0 chr10 2373500 2373524 -143215764 + AT_rich Low_complexity Low_complexity 1 24 0 1863 148 33 7 chr10 2373793 2374096 -143215192 - AluSx SINE Alu -1 311 1 239 273 15 0 chr10 2374230 2374296 -143214992 + LTR50 LTR ERVL 403 469 -326 25 31 0 0 chr10 2374673 2374705 -143214583 + AT_rich Low_complexity Low_complexity 1 32 0 23 0 0 0 chr10 2374760 2374783 -143214505 + AT_rich Low_complexity Low_complexity 1 23 0 219 36 0 0 chr10 2374806 2374834 -143214454 + (TTA)n Simple_repeat Simple_repeat 2 29 0 206 105 26 0 chr10 2375137 2375175 -143214113 + (CA)n Simple_repeat Simple_repeat 2 40 0 24 32 0 0 chr10 2375562 2375593 -143213695 + AT_rich Low_complexity Low_complexity 1 31 0 1928 160 3 6 chr10 2375772 2376084 -143213204 - AluSx SINE Alu -1 311 1 255 147 0 73 chr10 2377827 2377895 -143211393 + (TTTA)n Simple_repeat Simple_repeat 2 64 0 184 299 62 31 chr10 2378417 2378514 -143210774 - MIR SINE MIR -85 177 78 264 352 16 16 chr10 2378777 2378905 -143210383 - MIR SINE MIR -118 144 17 1749 163 36 28 chr10 2379028 2379500 -143209788 - MLT2A2 LTR ERVL -81 461 1 955 222 55 37 chr10 2379794 2380174 -143209114 - L1MA9 LINE L1 -25 6266 5859 190 54 27 27 chr10 2380202 2380239 -143209049 + (TAA)n Simple_repeat Simple_repeat 3 39 0 474 248 0 0 chr10 2380241 2380354 -143208934 + L1M2 LINE L1 5681 5793 -519 225 182 15 30 chr10 2380847 2380913 -143208375 - Charlie5 DNA MER1_type -129 2483 2419 1434 94 0 0 chr10 2380918 2381110 -143208178 + L1PA7 LINE L1 5950 6141 -13 232 241 0 0 chr10 2384486 2384540 -143204748 - MIR SINE MIR -26 236 183 994 270 59 28 chr10 2385077 2385430 -143203858 - L1MB2 LINE L1 -38 6133 5768 675 306 65 7 chr10 2385458 2385733 -143203555 - L2 LINE L2 -1005 2309 2019 225 0 100 0 chr10 2388527 2388567 -143200721 + T-rich Low_complexity Low_complexity 2 45 0 21 57 0 0 chr10 2388862 2388897 -143200391 + AT_rich Low_complexity Low_complexity 1 35 0 258 259 86 25 chr10 2389616 2389778 -143199510 - L1MB2 LINE L1 -1501 4645 4474 201 133 0 0 chr10 2389903 2389933 -143199355 + (TC)n Simple_repeat Simple_repeat 1 30 0 2043 81 11 0 chr10 2390464 2390725 -143198563 + AluSq SINE Alu 1 264 -49 352 257 71 0 chr10 2391030 2391170 -143198118 - L1MB2 LINE L1 -2222 3924 3775 434 261 62 26 chr10 2391870 2392065 -143197223 + MER3 DNA MER1_type 1 202 -7 22 0 0 0 chr10 2392254 2392276 -143197012 + AT_rich Low_complexity Low_complexity 1 22 0 2332 106 3 0 chr10 2394224 2394526 -143194762 + AluSx SINE Alu 1 303 -9 21 36 0 0 chr10 2397108 2397136 -143192152 + AT_rich Low_complexity Low_complexity 1 28 0 902 186 0 0 chr10 2397170 2397331 -143191957 + MER2 DNA MER2_type 3 163 -182 268 74 0 37 chr10 2399049 2399066 -143190222 + (TA)n Simple_repeat Simple_repeat 1 17 -35 189 0 0 0 chr10 2399066 2399087 -143190201 + (GA)n Simple_repeat Simple_repeat 2 22 0 268 74 0 37 chr10 2399087 2399123 -143190165 + (TA)n Simple_repeat Simple_repeat 17 52 0 365 202 0 64 chr10 2399161 2399255 -143190033 + L1MC4 LINE L1 6616 6703 -1339 243 0 0 0 chr10 2399263 2399290 -143189998 + (GA)n Simple_repeat Simple_repeat 2 28 0 240 100 0 0 chr10 2399347 2399387 -143189901 + (TA)n Simple_repeat Simple_repeat 1 40 0 256 307 20 0 chr10 2399619 2399720 -143189568 + L1ME LINE L1 5735 5837 -333 508 103 0 13 chr10 2399768 2399846 -143189442 + MADE1 DNA Mariner 4 80 0 378 0 0 0 chr10 2399847 2399889 -143189399 + (TAGA)n Simple_repeat Simple_repeat 4 45 0 314 239 9 0 chr10 2400523 2400632 -143188656 + (TA)n Simple_repeat Simple_repeat 1 110 0 400 333 16 58 chr10 2400697 2400980 -143188308 - L1MEd LINE L1 -4992 1078 784 305 277 27 54 chr10 2401422 2401534 -143187754 - L1MEd LINE L1 -5887 183 75 2487 81 7 0 chr10 2402112 2402420 -143186868 + AluY SINE Alu 2 311 0 302 313 21 0 chr10 2403750 2403846 -143185442 + L1ME LINE L1 5735 5832 -338 313 261 0 43 chr10 2403875 2404063 -143185225 + (TA)n Simple_repeat Simple_repeat 1 180 0 267 156 0 0 chr10 2404078 2404123 -143185165 - MSTA LTR MaLR -383 45 1 240 318 0 0 chr10 2404395 2404458 -143184830 + L2 LINE L2 2729 2791 -523 1399 165 81 0 chr10 2405345 2405581 -143183707 + AluJb SINE Alu 40 294 -18 2785 19 0 6 chr10 2405716 2406027 -143183261 + AluY SINE Alu 1 309 -2 1126 268 79 63 chr10 2407342 2408005 -143181283 - L1ME1 LINE L1 -3 6232 5524 2022 95 15 0 chr10 2408005 2408278 -143181010 - AluSp SINE Alu -35 278 2 1126 268 79 63 chr10 2408278 2408762 -143180526 - L1ME1 LINE L1 -711 5524 5049 979 316 57 35 chr10 2408793 2409380 -143179908 - L1ME1 LINE L1 -5415 981 365 1432 157 70 76 chr10 2409380 2409724 -143179564 + MER61A LTR ERV1 1 342 -1 979 316 57 35 chr10 2409724 2410054 -143179234 - L1ME1 LINE L1 -6031 365 44 30 0 0 0 chr10 2410602 2410632 -143178656 + AT_rich Low_complexity Low_complexity 1 30 0 192 111 0 0 chr10 2410659 2410695 -143178593 + (A)n Simple_repeat Simple_repeat 1 36 0 1227 179 10 5 chr10 2410964 2411171 -143178117 + AluJb SINE Alu 59 266 -46 186 209 0 0 chr10 2412294 2412337 -143176951 + (TAAA)n Simple_repeat Simple_repeat 2 44 0 500 278 67 0 chr10 2412970 2413164 -143176124 - MER20 DNA MER1_type -7 212 6 447 19 0 0 chr10 2413506 2413558 -143175730 + (CA)n Simple_repeat Simple_repeat 2 53 0 446 170 0 10 chr10 2414760 2414860 -143174428 + (CA)n Simple_repeat Simple_repeat 2 100 0 290 243 100 67 chr10 2415065 2415237 -143174051 + L1MA9 LINE L1 6058 6240 -72 204 40 0 0 chr10 2415237 2415262 -143174026 + (TA)n Simple_repeat Simple_repeat 1 25 0 290 243 100 67 chr10 2415262 2415299 -143173989 + L1MA9 LINE L1 6240 6274 -38 216 0 0 0 chr10 2417242 2417266 -143172022 + (T)n Simple_repeat Simple_repeat 1 24 0 200 293 0 27 chr10 2418707 2418782 -143170506 + (CATATA)n Simple_repeat Simple_repeat 3 75 0 323 322 91 34 chr10 2419210 2419474 -143169814 - L1M4 LINE L1 -1377 4769 4491 199 349 24 0 chr10 2419650 2419733 -143169555 - MIR SINE MIR -103 105 21 321 287 83 26 chr10 2420185 2420415 -143168873 - LTR43 LTR ERV1 -167 435 193 249 218 0 68 chr10 2423672 2423819 -143165469 + (TGG)n Simple_repeat Simple_repeat 2 138 0 365 145 0 58 chr10 2423831 2424003 -143165285 + (TGG)n Simple_repeat Simple_repeat 2 163 0 377 275 41 35 chr10 2425698 2425869 -143163419 + MIR SINE MIR 81 252 -10 21 36 0 0 chr10 2426280 2426308 -143162980 + AT_rich Low_complexity Low_complexity 1 28 0 414 302 122 12 chr10 2426754 2426999 -143162289 + MER69 DNA AcHobo 25 296 -2230 988 266 128 38 chr10 2427156 2427821 -143161467 - MER50 LTR ERV1 0 734 10 581 265 160 19 chr10 2428008 2428427 -143160861 + MER69 DNA AcHobo 2049 2526 0 712 228 106 5 chr10 2428490 2428679 -143160609 + MER58A DNA MER1_type 2 209 -15 25 31 0 0 chr10 2429257 2429289 -143159999 + AT_rich Low_complexity Low_complexity 1 32 0 3563 84 18 2 chr10 2430487 2430987 -143158301 - MER41A LTR ERV1 -46 508 1 2201 127 0 6 chr10 2431778 2432093 -143157195 + AluSq SINE Alu 1 313 0 380 250 0 46 chr10 2432449 2432557 -143156731 - MIR SINE MIR 0 262 160 2384 134 10 63 chr10 2432562 2433041 -143156247 + MER4D LTR ERV1 1 454 -418 1170 54 0 0 chr10 2433051 2433198 -143156090 - L1PA4 LINE L1 -3 6152 6006 1824 163 3 3 chr10 2433645 2433966 -143155322 - AluSx SINE Alu 0 312 1 2527 128 49 2 chr10 2434117 2434525 -143154763 - MSTA LTR MaLR -1 427 1 1054 249 92 12 chr10 2435256 2435682 -143153606 - MLT1C LTR MaLR -7 460 1 1292 213 66 3 chr10 2436248 2436568 -143152720 + MLT1B LTR MaLR 7 346 -44 325 217 0 0 chr10 2436572 2436641 -143152647 + MLT1B LTR MaLR 315 383 -7 629 155 17 17 chr10 2436919 2437035 -143152253 + FLAM_C SINE Alu 1 116 -17 207 0 0 0 chr10 2437051 2437074 -143152214 + (CAAAA)n Simple_repeat Simple_repeat 2 24 0 459 0 0 0 chr10 2437076 2437127 -143152161 + (TA)n Simple_repeat Simple_repeat 1 51 0 211 244 0 0 chr10 2437130 2437171 -143152117 + MIR SINE MIR 113 153 -109 852 140 110 0 chr10 2437836 2438038 -143151250 - AluSg/x SINE Alu 0 347 131 352 259 28 61 chr10 2439749 2439961 -143149327 + MER46C DNA MER2_type 1 205 -133 693 133 18 0 chr10 2440088 2440201 -143149087 + AluSg/x SINE Alu 192 306 -6 449 182 10 0 chr10 2440349 2440448 -143148840 + (CATATA)n Simple_repeat Simple_repeat 6 105 0 344 276 23 0 chr10 2440448 2440535 -143148753 + L1MC4 LINE L1 6614 6702 -1340 207 182 0 0 chr10 2440536 2440569 -143148719 + (CATATA)n Simple_repeat Simple_repeat 6 38 0 1137 128 0 0 chr10 2440569 2440749 -143148539 + (TA)n Simple_repeat Simple_repeat 1 180 0 31 99 0 0 chr10 2440890 2440991 -143148297 + AT_rich Low_complexity Low_complexity 1 101 0 843 290 153 17 chr10 2441349 2442121 -143147167 + L1ME3A LINE L1 5294 6170 0 763 308 47 18 chr10 2446075 2446527 -143142761 - L1ME3A LINE L1 -214 6374 5910 503 283 72 33 chr10 2446771 2447075 -143142213 - L1ME3A LINE L1 -913 5651 5336 1567 270 21 22 chr10 2447176 2447806 -143141482 + L1MC/D LINE L1 4024 4652 -1494 1403 164 9 4 chr10 2447814 2448045 -143141243 - AluSg/x SINE Alu -10 300 69 980 187 108 0 chr10 2448053 2448287 -143141001 - L1MA4A LINE L1 -134 6169 5912 * 2081 221 43 37 chr10 2448268 2449384 -143139904 + L1MC/D LINE L1 4645 5773 -571 1027 277 52 13 chr10 2449384 2449843 -143139445 - L1ME3A LINE L1 -3058 3506 3030 421 256 62 43 chr10 2449856 2450052 -143139236 - L1MCa LINE L1 -5882 343 17 367 255 168 0 chr10 2450135 2450296 -143138992 - L1MCa LINE L1 -3965 2461 2274 835 171 0 11 chr10 2450486 2450661 -143138627 + GA-rich Low_complexity Low_complexity 4 176 0 1537 231 66 52 chr10 2450970 2451572 -143137716 + L1MC4 LINE L1 7426 8036 -6 270 0 0 0 chr10 2451969 2451999 -143137289 + (T)n Simple_repeat Simple_repeat 1 30 0 317 193 114 57 chr10 2452846 2452934 -143136354 + MIR SINE MIR 20 112 -150 23 68 0 0 chr10 2452984 2453028 -143136260 + AT_rich Low_complexity Low_complexity 1 44 0 2741 23 0 0 chr10 2453952 2454260 -143135028 - AluYa5 SINE Alu -3 308 1 407 280 47 62 chr10 2454289 2454564 -143134724 + L1M4 LINE L1 4341 4611 -1535 342 67 0 0 chr10 2456126 2456171 -143133117 + (TG)n Simple_repeat Simple_repeat 2 46 0 257 175 10 52 chr10 2456561 2456658 -143132630 + (TATATG)n Simple_repeat Simple_repeat 2 94 0 315 248 44 83 chr10 2456975 2457110 -143132178 + MLT2C1 LTR ERVL 269 334 -63 2208 92 3 35 chr10 2457110 2457426 -143131862 - AluSx SINE Alu -6 306 1 315 248 44 83 chr10 2457426 2457488 -143131800 + MLT2C1 LTR ERVL 334 397 0 2224 123 0 0 chr10 2458076 2458386 -143130902 + AluSg SINE Alu 1 310 0 195 100 0 0 chr10 2458419 2458449 -143130839 + (CAAAA)n Simple_repeat Simple_repeat 3 32 0 204 346 88 11 chr10 2459078 2459260 -143130028 + L2 LINE L2 2196 2391 -923 214 337 45 0 chr10 2459579 2459668 -143129620 + MIR3 SINE MIR 96 188 -20 21 0 0 0 chr10 2460265 2460286 -143129002 + AT_rich Low_complexity Low_complexity 1 21 0 203 167 0 28 chr10 2460332 2460404 -143128884 + (TTATA)n Simple_repeat Simple_repeat 5 74 0 288 238 46 13 chr10 2460407 2460558 -143128730 + (TA)n Simple_repeat Simple_repeat 2 157 0 2070 99 7 7 chr10 2460687 2460969 -143128319 + AluSx SINE Alu 3 284 -28 1065 201 36 12 chr10 2461417 2461666 -143127622 - L1MB1 LINE L1 0 6168 5914 26 0 0 0 chr10 2464634 2464660 -143124628 + AT_rich Low_complexity Low_complexity 1 26 0 1493 161 8 0 chr10 2465718 2465954 -143123334 + AluJo SINE Alu 35 272 -40 207 0 0 0 chr10 2465970 2465993 -143123295 + (CAA)n Simple_repeat Simple_repeat 2 24 0 1634 115 0 0 chr10 2466155 2466373 -143122915 - AluSx SINE Alu -94 218 1 903 219 87 64 chr10 2466374 2466767 -143122521 + L1MDa LINE L1 1453 1854 -4686 851 167 13 8 chr10 2466896 2467136 -143122152 + CT-rich Low_complexity Low_complexity 1 241 0 2414 290 23 14 chr10 2467692 2468805 -143120483 - L1ME1 LINE L1 -5 6161 5039 1186 257 22 4 chr10 2468808 2469139 -143120149 - MER33 DNA MER1_type 0 324 1 1830 248 63 84 chr10 2469139 2470309 -143118979 - L1ME1 LINE L1 -1116 5030 3900 231 274 12 24 chr10 2470593 2470677 -143118611 + GA-rich Low_complexity Low_complexity 1 83 0 360 324 42 9 chr10 2470921 2471137 -143118151 - MIR SINE MIR -32 230 8 248 298 9 18 chr10 2471830 2471944 -143117344 + L1ME4a LINE L1 5944 6056 -65 342 0 0 0 chr10 2473804 2473842 -143115446 + (CA)n Simple_repeat Simple_repeat 2 39 0 453 161 0 0 chr10 2474298 2474385 -143114903 + (CA)n Simple_repeat Simple_repeat 2 88 0 374 38 0 19 chr10 2476306 2476359 -143112929 + (CA)n Simple_repeat Simple_repeat 1 52 0 21 36 0 0 chr10 2476628 2476656 -143112632 + AT_rich Low_complexity Low_complexity 1 28 0 229 281 22 11 chr10 2477397 2477486 -143111802 - L1ME LINE L1 -491 5630 5541 611 288 124 19 chr10 2477895 2478436 -143110852 - L1ME1 LINE L1 -2260 3886 3289 489 329 39 19 chr10 2478466 2478776 -143110512 - L1ME1 LINE L1 -3461 2685 2370 2457 249 33 12 chr10 2478962 2479654 -143109634 - L1MC3 LINE L1 0 7785 7079 1319 241 68 29 chr10 2479660 2480075 -143109213 - L1MC3 LINE L1 -937 6848 6418 1516 166 3 66 chr10 2480088 2480377 -143108911 + AluJo SINE Alu 11 281 -31 25 75 0 0 chr10 2480514 2480567 -143108721 + AT_rich Low_complexity Low_complexity 1 53 0 21 0 0 0 chr10 2480623 2480644 -143108644 + AT_rich Low_complexity Low_complexity 1 21 0 1101 222 66 26 chr10 2481337 2481695 -143107593 - MLT2D LTR ERVL -94 426 1 547 103 0 0 chr10 2481745 2481823 -143107465 + MADE1 DNA Mariner 1 78 -2 2085 132 0 0 chr10 2482961 2483256 -143106032 - AluSq SINE Alu -18 295 1 525 283 0 0 chr10 2483828 2483973 -143105315 - MIR SINE MIR -36 226 82 2010 144 38 123 chr10 2484127 2484600 -143104688 - Tigger2 DNA MER2_type 0 2718 2 318 313 23 16 chr10 2485031 2485159 -143104129 - MIR SINE MIR -133 129 1 1486 251 45 35 chr10 2486270 2486863 -143102425 + L1MDa LINE L1 1820 2418 -4122 1429 137 0 0 chr10 2487011 2487216 -143102072 - AluSx SINE Alu -107 205 1 1519 166 13 42 chr10 2487796 2487911 -143101377 + AluJo SINE Alu 2 119 -193 468 0 0 0 chr10 2487911 2487963 -143101325 + (CA)n Simple_repeat Simple_repeat 1 52 0 1519 166 13 42 chr10 2487963 2488154 -143101134 + AluJo SINE Alu 119 299 -13 23 0 0 0 chr10 2488154 2488177 -143101111 + AT_rich Low_complexity Low_complexity 1 23 0 183 139 0 0 chr10 2488805 2488841 -143100447 + (T)n Simple_repeat Simple_repeat 1 36 0 398 289 37 44 chr10 2489020 2489293 -143099995 + LTR37B LTR ERV1 198 468 0 182 231 39 39 chr10 2489999 2490051 -143099237 - MIR3 SINE MIR -7 201 150 683 206 25 0 chr10 2490066 2490226 -143099062 + L1MCa LINE L1 1769 1932 -4494 2355 97 3 0 chr10 2490255 2490565 -143098723 + AluSq SINE Alu 1 311 -2 319 276 140 7 chr10 2490635 2491064 -143098224 + MLT1E3 LTR MaLR 25 513 -111 565 160 14 83 chr10 2491352 2491496 -143097792 - L1M LINE L1 -775 5393 5260 230 331 60 60 chr10 2491541 2491692 -143097596 - L2 LINE L2 -39 3233 3083 228 399 114 0 chr10 2491900 2492093 -143097195 - L2 LINE L2 -549 2765 2551 180 313 0 16 chr10 2492204 2492268 -143097020 - MIR SINE MIR -2 260 198 6854 255 48 48 chr10 2492689 2496122 -143093166 - L1MEc LINE L1 -973 5671 2271 301 189 42 63 chr10 2496228 2496323 -143092965 - L1MEc LINE L1 -5568 974 882 648 312 56 37 chr10 2496404 2496865 -143092423 - L1MEc LINE L1 -5673 869 400 28 0 0 0 chr10 2498040 2498068 -143091220 + AT_rich Low_complexity Low_complexity 1 28 0 1388 226 76 21 chr10 2498271 2499087 -143090201 - L1MC3 LINE L1 -16 7769 7000 234 91 0 0 chr10 2499087 2499120 -143090168 + (TG)n Simple_repeat Simple_repeat 2 34 0 1388 226 76 21 chr10 2499120 2500849 -143088439 - L1MC3 LINE L1 -785 7000 5083 356 134 30 15 chr10 2500990 2501057 -143088231 + MADE1 DNA Mariner 1 68 -12 263 349 40 0 chr10 2501428 2501554 -143087734 + LTR16A LTR ERVL 298 428 -22 2196 116 0 3 chr10 2501554 2501865 -143087423 - AluSx SINE Alu -2 310 1 209 335 55 55 chr10 2504150 2504314 -143084974 - MIR SINE MIR -98 164 1 208 323 46 39 chr10 2505147 2505277 -143084011 - L2 LINE L2 -10 3303 3173 462 232 30 84 chr10 2506536 2506739 -143082549 + L1MA9 LINE L1 6099 6290 -1 348 24 0 0 chr10 2507666 2507707 -143081581 + (TG)n Simple_repeat Simple_repeat 1 41 0 256 330 58 111 chr10 2507820 2507977 -143081311 + L2 LINE L2 1764 1928 -1386 2619 116 28 0 chr10 2507977 2508331 -143080957 - THE1B LTR MaLR 0 364 1 256 330 58 111 chr10 2508331 2508707 -143080581 + L2 LINE L2 1928 2269 -1045 189 0 0 0 chr10 2510021 2510042 -143079246 + (TTCTG)n Simple_repeat Simple_repeat 2 22 0 743 89 0 89 chr10 2511666 2511789 -143077499 - MER57B LTR ERV1 0 434 323 1598 237 73 35 chr10 2511897 2511977 -143077311 - L1MD2 LINE L1 -10 6418 6342 2153 119 10 3 chr10 2511977 2512287 -143077001 - AluSq SINE Alu -1 312 1 1598 237 73 35 chr10 2512287 2513596 -143075692 - L1MD2 LINE L1 -86 6342 4909 1687 253 79 35 chr10 2513744 2513843 -143075445 - L1ME1 LINE L1 -15 6151 6058 1477 155 43 69 chr10 2513843 2514147 -143075141 + AluJo SINE Alu 1 296 -16 1687 253 79 35 chr10 2514147 2514683 -143074605 - L1ME1 LINE L1 -108 6058 5488 266 247 155 10 chr10 2514689 2514786 -143074502 - L1MD2 LINE L1 -6251 145 35 587 319 114 23 chr10 2514994 2515564 -143073724 + L2 LINE L2 2454 3076 -237 186 136 34 17 chr10 2515986 2516045 -143073243 + (TA)n Simple_repeat Simple_repeat 1 60 0 236 217 36 42 chr10 2516047 2516213 -143073075 + (TTATA)n Simple_repeat Simple_repeat 4 168 0 25 31 0 0 chr10 2516213 2516245 -143073043 + AT_rich Low_complexity Low_complexity 1 32 0 1100 245 62 28 chr10 2516924 2517058 -143072230 + MLT1C LTR MaLR 53 181 -286 2225 117 7 0 chr10 2517058 2517365 -143071923 + AluSp SINE Alu 1 309 -4 1100 245 62 28 chr10 2517365 2517630 -143071658 + MLT1C LTR MaLR 181 466 -1 22 0 0 0 chr10 2518217 2518239 -143071049 + AT_rich Low_complexity Low_complexity 1 22 0 210 37 0 0 chr10 2518989 2519016 -143070272 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1580 107 0 5 chr10 2519019 2519234 -143070054 - AluSg/x SINE Alu -22 290 77 887 235 59 56 chr10 2519340 2519663 -143069625 + MER33 DNA MER1_type 1 324 0 211 379 137 5 chr10 2519803 2520014 -143069274 - MIR SINE MIR -19 243 5 2161 103 40 7 chr10 2523178 2523478 -143065810 + AluSx SINE Alu 1 310 -2 327 209 0 0 chr10 2524087 2524197 -143065091 + (CA)n Simple_repeat Simple_repeat 2 111 0 515 216 6 0 chr10 2524226 2524393 -143064895 + (CA)n Simple_repeat Simple_repeat 2 169 0 25 0 0 0 chr10 2524802 2524827 -143064461 + AT_rich Low_complexity Low_complexity 1 25 0 427 195 11 11 chr10 2524833 2524920 -143064368 - AluJ/FRAM SINE Alu -6 306 220 8552 26 0 0 chr10 2524941 2526659 -143062629 - L1PA4 LINE L1 0 6155 4439 342 0 0 0 chr10 2527406 2527444 -143061844 + (TG)n Simple_repeat Simple_repeat 2 39 0 658 254 143 70 chr10 2529231 2529762 -143059526 - MLT1E3 LTR MaLR 0 624 24 2314 96 3 0 chr10 2529832 2530134 -143059154 - AluSq SINE Alu -10 303 1 597 177 73 8 chr10 2530273 2530397 -143058891 + L1MC3 LINE L1 7342 7473 -312 218 167 37 0 chr10 2530407 2530461 -143058827 + (TTATA)n Simple_repeat Simple_repeat 4 59 0 317 161 18 0 chr10 2530468 2530524 -143058764 - L1MC3 LINE L1 -312 7473 7417 381 300 13 21 chr10 2531262 2531620 -143057668 + T-rich Low_complexity Low_complexity 1 482 0 2316 67 3 0 chr10 2533484 2533784 -143055504 + AluY SINE Alu 4 304 -7 239 143 0 18 chr10 2535185 2535241 -143054047 + (TTTTC)n Simple_repeat Simple_repeat 1 55 0 550 0 29 0 chr10 2535916 2535986 -143053302 + (TAGA)n Simple_repeat Simple_repeat 4 75 0 2263 99 0 10 chr10 2536141 2536445 -143052843 - AluSp SINE Alu -12 301 1 244 251 76 58 chr10 2537594 2537765 -143051523 + L1M4 LINE L1 4484 4657 -1489 1272 273 26 0 chr10 2538025 2538370 -143050918 - L1MCb LINE L1 -5078 967 614 362 202 62 70 chr10 2538363 2538492 -143050796 + L1MCb LINE L1 934 1061 -4984 * 1336 153 7 65 chr10 2538484 2538759 -143050529 + L1MC1 LINE L1 5623 5881 -452 32 0 0 0 chr10 2538759 2538791 -143050497 + AT_rich Low_complexity Low_complexity 1 32 0 372 157 47 6 chr10 2538791 2538963 -143050325 + (TA)n Simple_repeat Simple_repeat 2 180 0 2111 131 3 0 chr10 2539734 2540032 -143049256 + AluSx SINE Alu 1 299 -13 286 282 13 0 chr10 2540385 2540463 -143048825 + MER116 DNA Mariner 1 79 -1 31 26 0 0 chr10 2540886 2540924 -143048364 + AT_rich Low_complexity Low_complexity 1 38 0 2038 127 3 29 chr10 2541336 2541650 -143047638 + AluSx SINE Alu 1 306 -6 257 246 0 0 chr10 2541689 2541750 -143047538 + (TAGA)n Simple_repeat Simple_repeat 1 61 0 208 381 41 0 chr10 2542635 2542732 -143046556 + L2 LINE L2 3158 3258 -14 2389 86 3 13 chr10 2542819 2542955 -143046333 + AluSx SINE Alu 1 137 -196 2288 85 7 16 chr10 2542955 2543262 -143046026 + AluY SINE Alu 1 304 -7 2389 86 3 13 chr10 2543262 2543461 -143045827 + AluSx SINE Alu 137 333 0 2189 96 7 10 chr10 2544120 2544412 -143044876 + AluSg SINE Alu 1 291 -19 2507 59 7 0 chr10 2545036 2545343 -143043945 - AluY SINE Alu -2 309 1 520 326 40 50 chr10 2546715 2547168 -143042120 - L1MEc LINE L1 -4574 2548 2105 279 93 0 0 chr10 2547168 2547211 -143042077 + (TG)n Simple_repeat Simple_repeat 2 44 0 520 326 40 50 chr10 2547211 2547531 -143041757 - L1MEc LINE L1 -5017 2105 1783 465 312 87 86 chr10 2547580 2548457 -143040831 - L1MEc LINE L1 -4891 1532 655 798 303 83 5 chr10 2548577 2549000 -143040288 - L1MEc LINE L1 -5949 474 19 1965 143 0 0 chr10 2549217 2549497 -143039791 + AluSx SINE Alu 1 280 -32 390 57 0 0 chr10 2549500 2549553 -143039735 + (CA)n Simple_repeat Simple_repeat 2 54 0 2514 55 0 0 chr10 2550000 2550310 -143038978 - AluY SINE Alu -1 310 1 233 140 18 0 chr10 2550447 2550504 -143038784 + GA-rich Low_complexity Low_complexity 2 59 0 1902 144 4 0 chr10 2551448 2551764 -143037524 + AluSx SINE Alu 6 322 0 21 0 0 0 chr10 2551912 2551933 -143037355 + AT_rich Low_complexity Low_complexity 1 21 0 24 32 0 0 chr10 2553530 2553561 -143035727 + AT_rich Low_complexity Low_complexity 1 31 0 702 202 0 4 chr10 2554601 2554842 -143034446 + GA-rich Low_complexity Low_complexity 1 239 0 246 252 103 47 chr10 2554970 2555077 -143034211 - L2 LINE L2 0 3272 3160 1158 102 36 0 chr10 2555170 2555337 -143033951 + L1PA13 LINE L1 5972 6144 -19 556 321 32 0 chr10 2555706 2555893 -143033395 - MIR SINE MIR -4 258 66 337 255 0 57 chr10 2556958 2557064 -143032224 + L2 LINE L2 2458 2557 -757 1515 97 0 29 chr10 2557075 2557281 -143032007 - AluSq SINE Alu -113 200 1 239 280 32 64 chr10 2557317 2557442 -143031846 + L2 LINE L2 3193 3313 0 24 67 0 0 chr10 2558920 2558965 -143030323 + AT_rich Low_complexity Low_complexity 1 45 0 386 283 53 25 chr10 2560257 2560572 -143028716 - L1MEc LINE L1 -5918 478 91 * 2036 217 46 19 chr10 2560566 2561202 -143028086 - L1M4 LINE L1 -1316 4830 4178 2127 138 0 0 chr10 2562441 2562737 -143026551 + AluSx SINE Alu 3 298 -14 1407 233 43 62 chr10 2563548 2563865 -143025423 + MLT1D LTR MaLR 1 305 -200 370 145 53 26 chr10 2563865 2563941 -143025347 + MADE1 DNA Mariner 3 80 0 1407 233 43 62 chr10 2563941 2564136 -143025152 + MLT1D LTR MaLR 305 502 -3 1017 205 10 0 chr10 2564233 2564428 -143024860 + L1MC3 LINE L1 6666 6862 -923 1322 248 103 15 chr10 2564464 2564919 -143024369 + L1MC3 LINE L1 7282 7776 -9 29 28 0 0 chr10 2564943 2564979 -143024309 + AT_rich Low_complexity Low_complexity 1 36 0 26 0 0 0 chr10 2565152 2565178 -143024110 + AT_rich Low_complexity Low_complexity 1 26 0 437 306 36 16 chr10 2565228 2565421 -143023867 + L1MC5 LINE L1 6995 7191 -770 1924 131 17 17 chr10 2566064 2566361 -143022927 + AluSx SINE Alu 1 297 -15 394 281 82 0 chr10 2567749 2567884 -143021404 - MLT1H LTR MaLR -26 523 378 394 182 0 39 chr10 2567993 2568070 -143021218 - AluS SINE Alu -228 74 1 213 281 11 34 chr10 2568506 2568595 -143020693 - MIR SINE MIR -23 239 153 234 184 0 0 chr10 2569687 2569736 -143019552 + L1ME4a LINE L1 6069 6117 -4 369 298 99 33 chr10 2569961 2570233 -143019055 + MLT1H LTR MaLR 62 351 -198 920 60 0 0 chr10 2573387 2573504 -143015784 + L1PA4 LINE L1 6031 6147 -8 2029 69 0 138 chr10 2573904 2574253 -143015035 + AluY SINE Alu 1 301 -10 289 313 109 16 chr10 2574846 2574974 -143014314 + MIR SINE MIR 12 151 -111 32 43 0 0 chr10 2575881 2575927 -143013361 + AT_rich Low_complexity Low_complexity 1 46 0 329 311 0 0 chr10 2575930 2576020 -143013268 - L1MC4 LINE L1 -1339 6703 6614 316 322 0 0 chr10 2575952 2576042 -143013246 + L1MC4 LINE L1 6614 6703 -1339 * 2319 79 14 0 chr10 2576053 2576343 -143012945 - AluY SINE Alu -17 294 1 22 35 0 0 chr10 2576735 2576764 -143012524 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr10 2576899 2576928 -143012360 + AT_rich Low_complexity Low_complexity 1 29 0 454 259 78 18 chr10 2577261 2577427 -143011861 - MLT1E2 LTR MaLR -11 615 440 486 245 15 67 chr10 2577662 2577880 -143011408 + L1MCa LINE L1 1508 1906 -4701 1594 257 32 20 chr10 2577880 2578526 -143010762 + L1MCa LINE L1 2899 3552 -2874 488 264 110 0 chr10 2578906 2579088 -143010200 + MER5C DNA MER1_type 1 202 -122 205 195 0 0 chr10 2580541 2580582 -143008706 + (TA)n Simple_repeat Simple_repeat 1 41 0 2078 208 41 4 chr10 2581458 2581924 -143007364 + MER66B LTR ERV1 1 483 -3 226 308 19 19 chr10 2581927 2582031 -143007257 + L1MEd LINE L1 324 427 -5692 457 177 37 7 chr10 2582220 2582493 -143006795 + (TA)n Simple_repeat Simple_repeat 1 281 0 337 184 48 0 chr10 2582508 2582676 -143006612 + (TA)n Simple_repeat Simple_repeat 2 177 0 495 155 45 0 chr10 2582700 2583035 -143006253 + (TA)n Simple_repeat Simple_repeat 1 350 0 1858 199 63 22 chr10 2583035 2583493 -143005795 + L1MC2 LINE L1 5859 6335 -9 247 343 38 48 chr10 2583791 2584001 -143005287 + L3 LINE CR1 816 1023 -554 205 344 0 0 chr10 2584082 2584143 -143005145 - MIR SINE MIR -6 256 196 203 363 62 38 chr10 2584596 2584756 -143004532 + MIR SINE MIR 20 183 -79 265 222 0 48 chr10 2585086 2585149 -143004139 + MER4-int LTR ERV1 1112 1171 -5427 2278 110 7 0 chr10 2585898 2586207 -143003081 - AluSx SINE Alu -1 311 1 2026 113 7 7 chr10 2587003 2587287 -143002001 - AluSx SINE Alu -26 286 3 24 32 0 0 chr10 2588237 2588268 -143001020 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr10 2588292 2588316 -143000972 + AT_rich Low_complexity Low_complexity 1 24 0 205 294 19 88 chr10 2589470 2589630 -142999658 + L2 LINE L2 2906 3054 -218 2440 110 22 0 chr10 2590054 2590410 -142998878 + THE1B LTR MaLR 1 364 0 213 39 0 0 chr10 2592036 2592062 -142997226 + (A)n Simple_repeat Simple_repeat 1 26 0 301 225 0 0 chr10 2592294 2592365 -142996923 - L1ME4a LINE L1 0 6121 6051 2457 48 7 0 chr10 2592926 2593218 -142996070 - AluY SINE Alu -8 303 10 260 338 14 27 chr10 2593700 2593848 -142995440 + L1MCc LINE L1 763 908 -5515 1976 111 18 56 chr10 2594096 2594331 -142994957 + THE1B LTR MaLR 3 223 -141 2160 121 0 3 chr10 2594331 2594629 -142994659 + AluSx SINE Alu 1 297 -15 1976 111 18 56 chr10 2594629 2594734 -142994554 + THE1B LTR MaLR 223 330 -34 669 305 44 29 chr10 2594817 2595229 -142994059 + L1MCc LINE L1 1197 1608 -4887 298 351 15 8 chr10 2595246 2595380 -142993908 + L1M4 LINE L1 4829 4963 -1183 612 283 44 9 chr10 2595386 2595612 -142993676 + L1M4 LINE L1 4004 4237 -1909 789 272 46 14 chr10 2595631 2595977 -142993311 + L1M4 LINE L1 4292 4648 -1498 249 281 66 12 chr10 2598140 2598307 -142990981 + L1MCc LINE L1 523 698 -6243 797 256 34 78 chr10 2598961 2599507 -142989781 + L1MCc LINE L1 1683 2213 -4728 198 0 0 0 chr10 2599973 2599995 -142989293 + (TTTTA)n Simple_repeat Simple_repeat 3 24 0 2153 117 0 7 chr10 2600006 2600304 -142988984 - AluSx SINE Alu -15 297 2 1335 72 0 0 chr10 2600789 2600969 -142988319 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 693 79 26 9 chr10 2600969 2601083 -142988205 + (TTTC)n Simple_repeat Simple_repeat 4 119 0 214 29 57 0 chr10 2601739 2601774 -142987514 + (TA)n Simple_repeat Simple_repeat 1 37 0 281 26 26 0 chr10 2603196 2603234 -142986054 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 243 0 0 0 chr10 2603913 2603940 -142985348 + (TTTA)n Simple_repeat Simple_repeat 2 28 0 2649 118 3 0 chr10 2604116 2604490 -142984798 - THE1C LTR MaLR 0 375 1 2354 136 24 2 chr10 2604852 2605263 -142984025 + MSTB1 LTR MaLR 1 420 -12 21 82 0 0 chr10 2605841 2605890 -142983398 + AT_rich Low_complexity Low_complexity 1 49 0 1644 103 45 5 chr10 2606190 2606414 -142982874 + AluSx SINE Alu 60 292 -20 2520 70 0 3 chr10 2607485 2607797 -142981491 - AluY SINE Alu 0 311 1 340 226 50 99 chr10 2607974 2608155 -142981133 + HAL1b LINE L1 634 805 -543 23 54 0 0 chr10 2608607 2608644 -142980644 + AT_rich Low_complexity Low_complexity 1 37 0 2361 265 128 6 chr10 2610215 2611074 -142978214 + L1M4b LINE L1 12 975 -5884 2110 267 56 46 chr10 2611553 2612723 -142976565 + L1M4b LINE L1 1120 2300 -4659 998 109 0 0 chr10 2613113 2613241 -142976047 - AluSq/x SINE Alu -185 128 1 574 287 0 32 chr10 2613304 2613520 -142975768 - MER3 DNA MER1_type 0 209 1 1759 199 17 6 chr10 2613716 2614077 -142975211 - MLT1A1 LTR MaLR 0 365 1 1275 265 23 25 chr10 2614277 2614748 -142974540 - MER110 LTR ERV1 -5 486 17 207 186 0 0 chr10 2615565 2615608 -142973680 + (CATATA)n Simple_repeat Simple_repeat 6 48 0 23 0 0 0 chr10 2615860 2615883 -142973405 + AT_rich Low_complexity Low_complexity 1 23 0 1327 261 57 11 chr10 2616401 2616841 -142972447 - LTR40b LTR ERVL 0 462 3 441 193 205 91 chr10 2617200 2617454 -142971834 + MLT1C LTR MaLR 187 443 -24 367 68 34 0 chr10 2617462 2617521 -142971767 + (TG)n Simple_repeat Simple_repeat 1 61 0 3530 188 33 11 chr10 2618318 2619015 -142970273 - MER44D DNA MER2_type -7 598 15 311 298 26 18 chr10 2619161 2619275 -142970013 + L1MC/D LINE L1 5547 5661 -2147 2115 103 7 33 chr10 2619287 2619589 -142969699 + AluSx SINE Alu 1 294 -18 231 36 0 0 chr10 2619589 2619617 -142969671 + (GGAA)n Simple_repeat Simple_repeat 3 30 0 290 194 0 10 chr10 2620286 2620384 -142968904 + (CA)n Simple_repeat Simple_repeat 1 97 0 22 94 0 0 chr10 2620481 2620545 -142968743 + AT_rich Low_complexity Low_complexity 1 64 0 261 0 0 0 chr10 2620852 2620881 -142968407 + (TG)n Simple_repeat Simple_repeat 2 30 0 315 279 68 26 chr10 2621598 2621788 -142967500 - LTR16B LTR ERVL 0 464 267 274 240 54 0 chr10 2626822 2626951 -142962337 + (CTAG)n Simple_repeat Simple_repeat 3 138 0 2182 55 15 0 chr10 2628430 2628701 -142960587 - AluY SINE Alu -7 304 30 240 301 113 23 chr10 2628760 2628893 -142960395 + MIR SINE MIR 115 259 -3 22 0 0 0 chr10 2631336 2631358 -142957930 + AT_rich Low_complexity Low_complexity 1 22 0 213 39 0 0 chr10 2632821 2632847 -142956441 + (CA)n Simple_repeat Simple_repeat 1 26 0 235 330 9 57 chr10 2633525 2633631 -142955657 - MIR SINE MIR -68 140 40 240 200 0 0 chr10 2634227 2634287 -142955001 + (TA)n Simple_repeat Simple_repeat 1 60 0 566 344 114 14 chr10 2634645 2635003 -142954285 + L2 LINE L2 2920 3313 0 268 309 36 12 chr10 2635094 2635178 -142954110 - L2 LINE L2 -19 3294 3209 813 205 127 72 chr10 2635277 2635623 -142953665 + MLT1A1 LTR MaLR 1 365 0 1585 215 0 0 chr10 2635929 2636213 -142953075 + AluJb SINE Alu 10 293 -19 1279 209 38 62 chr10 2636878 2637251 -142952037 + MLT1A1 LTR MaLR 1 364 -1 25 0 0 0 chr10 2637716 2637741 -142951547 + AT_rich Low_complexity Low_complexity 1 25 0 247 307 162 0 chr10 2638282 2638461 -142950827 - L1ME LINE L1 -300 5864 5657 4484 248 56 53 chr10 2638481 2638861 -142950427 + L1M4 LINE L1 2 379 -6267 2363 129 11 5 chr10 2638861 2639234 -142950054 + THE1C LTR MaLR 1 375 0 4484 248 56 53 chr10 2639234 2640240 -142949048 + L1M4 LINE L1 379 1381 -5265 2321 114 0 0 chr10 2640240 2640546 -142948742 + AluSq SINE Alu 1 306 -7 4484 248 56 53 chr10 2640546 2641648 -142947640 + L1M4 LINE L1 1381 2615 -4031 421 221 60 59 chr10 2641744 2641937 -142947351 - L1ME LINE L1 -683 5479 5288 180 0 0 0 chr10 2641937 2641957 -142947331 + (TA)n Simple_repeat Simple_repeat 2 21 0 2277 80 0 0 chr10 2641957 2642246 -142947042 - AluY SINE Alu -22 289 1 421 221 60 59 chr10 2642246 2642336 -142946952 - L1ME LINE L1 -873 5289 5192 234 0 0 0 chr10 2642385 2642411 -142946877 + (CA)n Simple_repeat Simple_repeat 1 26 0 261 310 133 22 chr10 2642438 2642664 -142946624 + L1MC/D LINE L1 377 627 -5443 267 313 0 0 chr10 2642837 2642933 -142946355 + HsTC2 DNA Tc2 1802 1897 -1 206 323 16 0 chr10 2644861 2644923 -142944365 + C-rich Low_complexity Low_complexity 5 67 0 348 354 50 0 chr10 2645018 2645179 -142944109 - MIR SINE MIR -74 188 20 309 197 61 0 chr10 2645207 2645273 -142944015 - FRAM/FAM SINE Alu -90 85 16 261 83 0 0 chr10 2695547 2695583 -142893705 + (TG)n Simple_repeat Simple_repeat 2 37 0 1708 245 51 22 chr10 2695646 2696312 -142892976 + L1MC/D LINE L1 3742 4426 -1654 1561 230 91 16 chr10 2696304 2696979 -142892309 + L1MC/D LINE L1 5016 5741 -435 * 213 313 48 36 chr10 2697110 2697193 -142892095 + L2 LINE L2 3146 3229 -43 225 240 0 0 chr10 2697351 2697426 -142891862 + (TA)n Simple_repeat Simple_repeat 1 75 0 659 126 14 28 chr10 2698103 2698246 -142891042 + GA-rich Low_complexity Low_complexity 4 144 0 517 260 120 67 chr10 2700705 2701121 -142888167 - MLT1H LTR MaLR -46 503 66 22 35 0 0 chr10 2702997 2703026 -142886262 + AT_rich Low_complexity Low_complexity 1 29 0 25 31 0 0 chr10 2704119 2704151 -142885137 + AT_rich Low_complexity Low_complexity 1 32 0 1861 193 75 2 chr10 2704156 2704555 -142884733 + MSTA LTR MaLR 1 428 0 23 33 0 0 chr10 2705091 2705121 -142884167 + AT_rich Low_complexity Low_complexity 1 30 0 1751 179 26 13 chr10 2705138 2705446 -142883842 + AluJo SINE Alu 1 312 0 2193 201 47 43 chr10 2705687 2706200 -142883088 - LTR40a LTR ERVL 0 519 5 1945 139 3 3 chr10 2706247 2706542 -142882746 - AluSx SINE Alu -17 295 1 299 304 13 0 chr10 2706549 2706628 -142882660 - L2 LINE L2 -17 3255 3176 264 350 53 0 chr10 2707888 2708094 -142881194 - LTR33 LTR ERVL 0 521 305 237 239 33 54 chr10 2708726 2708818 -142880470 - MER5B DNA MER1_type -12 166 77 1414 150 24 8 chr10 2709925 2710172 -142879116 + L1MA4 LINE L1 6042 6292 -8 21 36 0 0 chr10 2710711 2710739 -142878549 + AT_rich Low_complexity Low_complexity 1 28 0 5464 102 11 7 chr10 2712328 2713126 -142876162 - L1PA14 LINE L1 -123 6038 5237 1492 160 29 64 chr10 2714053 2714236 -142875052 - AluJb SINE Alu -10 302 133 2259 111 3 13 chr10 2714236 2714551 -142874737 - AluSx SINE Alu 0 312 1 1492 160 29 64 chr10 2714551 2714680 -142874608 - AluJb SINE Alu -179 133 1 200 244 90 13 chr10 2714964 2715042 -142874246 + MIR3 SINE MIR 121 204 -4 478 239 26 0 chr10 2715271 2715388 -142873900 + MER58B DNA MER1_type 222 341 0 407 351 52 0 chr10 2715579 2715753 -142873535 + MIR SINE MIR 74 256 -6 216 0 0 0 chr10 2715764 2715788 -142873500 + (CA)n Simple_repeat Simple_repeat 2 25 0 801 185 0 0 chr10 2717271 2717449 -142871839 + (TCCA)n Simple_repeat Simple_repeat 1 178 0 733 317 16 12 chr10 2718037 2718280 -142871008 - MIR SINE MIR -3 259 16 230 227 41 21 chr10 2718380 2718477 -142870811 + (TA)n Simple_repeat Simple_repeat 1 99 0 255 31 0 0 chr10 2718618 2718650 -142870638 + (A)n Simple_repeat Simple_repeat 1 32 0 216 217 17 17 chr10 2720147 2720207 -142869081 + (CA)n Simple_repeat Simple_repeat 1 60 0 1848 141 0 0 chr10 2720712 2720974 -142868314 + AluSx SINE Alu 46 307 -5 183 80 0 0 chr10 2720999 2721024 -142868264 + (CAA)n Simple_repeat Simple_repeat 1 25 0 2776 96 8 11 chr10 2723515 2723880 -142865408 - THE1B LTR MaLR 0 364 1 207 319 29 0 chr10 2724061 2724130 -142865158 + MIR SINE MIR 56 126 -136 30 27 0 0 chr10 2725015 2725052 -142864236 + AT_rich Low_complexity Low_complexity 1 37 0 222 313 36 12 chr10 2726233 2726316 -142862972 + MIR3 SINE MIR 15 99 -109 264 358 80 0 chr10 2727507 2727658 -142861630 + HERV16 LTR ERVL 1412 1574 -3422 1448 343 48 50 chr10 2727804 2728788 -142860500 + HERV16 LTR ERVL 2380 3091 -1905 189 180 0 0 chr10 2729449 2729499 -142859789 + A-rich Low_complexity Low_complexity 1 50 0 337 213 67 0 chr10 2730743 2730818 -142858470 + Tigger3(Golem) DNA MER2_type 1 80 -2949 483 229 38 0 chr10 2730947 2731052 -142858236 + Tigger3(Golem) DNA MER2_type 2930 3038 0 225 267 17 0 chr10 2731923 2731983 -142857305 + (TG)n Simple_repeat Simple_repeat 2 62 0 268 313 146 30 chr10 2732549 2732782 -142856506 + L3 LINE CR1 701 960 -617 486 206 199 0 chr10 2733141 2733272 -142856016 - MER45A DNA AcHobo -19 159 3 2719 207 51 3 chr10 2733421 2734014 -142855274 - L1MB3 LINE L1 -15 6168 5548 694 224 42 21 chr10 2734009 2734250 -142855038 - L1MB3 LINE L1 -3261 2885 2640 * 1236 217 44 0 chr10 2734273 2734545 -142854743 - L1M3 LINE L1 -624 6519 6236 * 4216 255 95 28 chr10 2734542 2737189 -142852099 - L1M3 LINE L1 -2105 5001 1971 1854 189 0 0 chr10 2737189 2737490 -142851798 - AluSx SINE Alu -6 306 6 4216 255 95 28 chr10 2737490 2738233 -142851055 - L1M3 LINE L1 -5135 1971 1279 273 309 16 16 chr10 2738627 2738750 -142850538 - L1M3 LINE L1 -6903 127 5 232 197 115 0 chr10 2738759 2738820 -142850468 + MLT1F LTR MaLR 475 542 0 2379 150 28 14 chr10 2739110 2739469 -142849819 - THE1B LTR MaLR 0 364 1 1262 181 110 13 chr10 2740077 2740401 -142848887 - Tigger1 DNA MER2_type 0 2418 1 2228 110 0 0 chr10 2741926 2742226 -142847062 - AluSx SINE Alu -12 300 1 25 31 0 0 chr10 2743523 2743555 -142845733 + AT_rich Low_complexity Low_complexity 1 32 0 348 248 8 56 chr10 2743800 2743925 -142845363 + MER58 DNA MER1_type 2301 2419 -1 2311 88 0 0 chr10 2744185 2744480 -142844808 + AluY SINE Alu 1 295 -16 207 273 0 0 chr10 2744961 2745005 -142844283 + MIR SINE MIR 219 262 0 22 56 0 0 chr10 2745465 2745501 -142843787 + AT_rich Low_complexity Low_complexity 1 36 0 1794 121 7 78 chr10 2745502 2745809 -142843479 - AluSg SINE Alu -25 285 1 819 127 32 16 chr10 2745920 2746046 -142843242 + L1PA8A LINE L1 6004 6131 0 416 106 0 30 chr10 2746071 2746137 -142843151 + L2 LINE L2 3250 3313 0 662 301 81 31 chr10 2746809 2747168 -142842120 + L1ME3A LINE L1 5740 6116 -54 334 279 99 83 chr10 2749034 2749517 -142839771 + MLT1H LTR MaLR 10 500 -49 226 228 110 118 chr10 2749745 2749881 -142839407 + MLT1I LTR MaLR 249 383 -26 1231 122 5 46 chr10 2749942 2750139 -142839149 - L1PA8A LINE L1 -2 6129 5941 2488 72 0 3 chr10 2750169 2750476 -142838812 + AluY SINE Alu 6 311 0 359 327 9 9 chr10 2750479 2750586 -142838702 - MIR SINE MIR -141 121 15 255 103 0 0 chr10 2751095 2751134 -142838154 + (TTTTA)n Simple_repeat Simple_repeat 4 42 0 321 243 157 29 chr10 2751937 2752077 -142837211 - L2 LINE L2 -4 3309 3152 2166 96 4 0 chr10 2752098 2752378 -142836910 - AluSc SINE Alu -28 281 1 4789 85 2 0 chr10 2752912 2753512 -142835776 - L1PA8 LINE L1 0 6172 5572 282 297 133 16 chr10 2753696 2753824 -142835464 + MER5B DNA MER1_type 2 144 -34 185 309 18 0 chr10 2754877 2754932 -142834356 - MIR3 SINE MIR -7 201 146 3196 196 60 4 chr10 2754943 2755458 -142833830 - L1MA4A LINE L1 0 6303 5739 279 79 0 0 chr10 2755458 2755496 -142833792 + (TTCA)n Simple_repeat Simple_repeat 4 41 0 3196 196 60 4 chr10 2755496 2755663 -142833625 - L1MA4A LINE L1 -564 5739 5583 1533 111 53 0 chr10 2755829 2756037 -142833251 - AluSg SINE Alu -52 258 40 389 196 0 10 chr10 2757508 2757605 -142831683 + (TG)n Simple_repeat Simple_repeat 2 97 0 1507 154 3 65 chr10 2758359 2758651 -142830637 + AluJo SINE Alu 9 282 -30 481 317 102 15 chr10 2758700 2759104 -142830184 - L2 LINE L2 -1717 1597 1159 366 223 108 47 chr10 2759794 2759966 -142829322 - MLT1J1 LTR MaLR -8 417 246 203 231 31 0 chr10 2763115 2763180 -142826108 + (TCTG)n Simple_repeat Simple_repeat 2 68 0 297 287 165 9 chr10 2763747 2763862 -142825426 + MIR SINE MIR 27 159 -103 218 309 25 12 chr10 2763877 2763958 -142825330 + MIR SINE MIR 116 197 -65 2406 92 0 0 chr10 2764212 2764515 -142824773 + AluSq SINE Alu 1 303 -10 372 357 28 7 chr10 2764667 2764810 -142824478 + MER91A DNA MER1_type 3 148 -48 212 184 0 0 chr10 2765023 2765061 -142824227 + A-rich Low_complexity Low_complexity 1 38 0 307 290 43 91 chr10 2765321 2765865 -142823423 + L1ME LINE L1 5327 5855 -266 201 231 39 0 chr10 2765865 2765917 -142823371 + (TGGA)n Simple_repeat Simple_repeat 3 56 0 211 118 29 0 chr10 2767251 2767285 -142822003 + L2 LINE L2 3233 3267 -5 182 61 0 30 chr10 2767361 2767394 -142821894 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 1717 142 0 0 chr10 2767397 2767637 -142821651 - AluJb SINE Alu -27 285 46 28 48 0 0 chr10 2767687 2767729 -142821559 + AT_rich Low_complexity Low_complexity 1 42 0 24 32 0 0 chr10 2768203 2768234 -142821054 + AT_rich Low_complexity Low_complexity 1 31 0 3408 170 69 11 chr10 2769325 2769552 -142819736 - L1PB4 LINE L1 -3 6153 5941 2047 147 69 30 chr10 2769552 2769913 -142819375 + THE1C LTR MaLR 1 375 0 3408 170 69 11 chr10 2769913 2770326 -142818962 - L1PB4 LINE L1 -215 5941 5476 1096 194 51 0 chr10 2770326 2770522 -142818766 - AluJo SINE Alu -20 292 87 47 33 0 0 chr10 2771471 2771532 -142817756 + AT_rich Low_complexity Low_complexity 1 61 0 669 169 0 78 chr10 2771698 2771871 -142817417 + FLAM_C SINE Alu 1 133 0 1929 158 3 16 chr10 2771877 2772193 -142817095 - AluJb SINE Alu 0 312 1 180 167 0 28 chr10 2772943 2772979 -142816309 + L2 LINE L2 3222 3256 -16 180 263 0 66 chr10 2773116 2773192 -142816096 + L3 LINE CR1 1459 1529 -48 2192 121 7 0 chr10 2773353 2773660 -142815628 - AluSc SINE Alu 0 309 1 454 331 14 0 chr10 2774418 2774563 -142814725 - MIR SINE MIR -2 260 114 2243 69 3 17 chr10 2776190 2776481 -142812807 - AluSc SINE Alu -22 287 1 634 216 112 0 chr10 2777408 2777533 -142811755 - FAM SINE Alu -27 158 20 2050 136 3 0 chr10 2777599 2777894 -142811394 + AluSq SINE Alu 1 296 -17 2153 118 7 3 chr10 2777929 2778226 -142811062 + AluSx SINE Alu 1 298 -14 216 0 0 0 chr10 2778840 2778864 -142810424 + (CAATT)n Simple_repeat Simple_repeat 2 25 0 273 233 80 20 chr10 2780259 2780374 -142808914 + MLT1J LTR MaLR 46 181 -290 324 333 81 38 chr10 2780635 2780701 -142808587 + L1ME3A LINE L1 5680 5742 -428 2077 130 10 0 chr10 2780701 2781000 -142808288 + AluSg SINE Alu 5 306 -4 324 333 81 38 chr10 2781000 2781194 -142808094 + L1ME3A LINE L1 5742 5951 -219 1550 207 68 19 chr10 2781208 2781575 -142807713 - MLT1B LTR MaLR -2 388 4 435 137 0 0 chr10 2781739 2781812 -142807476 + (CA)n Simple_repeat Simple_repeat 2 74 0 201 237 13 26 chr10 2782063 2782139 -142807149 + A-rich Low_complexity Low_complexity 2 76 0 41 0 0 0 chr10 2782827 2782868 -142806420 + AT_rich Low_complexity Low_complexity 1 41 0 261 0 0 0 chr10 2783665 2783694 -142805594 + (CA)n Simple_repeat Simple_repeat 2 30 0 26 30 0 0 chr10 2783760 2783793 -142805495 + AT_rich Low_complexity Low_complexity 1 33 0 867 182 54 54 chr10 2784151 2784354 -142804934 + THE1B LTR MaLR 107 309 -55 1057 284 101 22 chr10 2784522 2785036 -142804252 - L2 LINE L2 -1 3312 2748 423 303 229 14 chr10 2785072 2785425 -142803863 - L2 LINE L2 -695 2619 2191 3346 113 26 27 chr10 2785443 2786018 -142803270 + MER51A LTR ERV1 1 634 0 323 285 145 73 chr10 2786018 2786322 -142802966 - L2 LINE L2 -1126 2188 1853 2257 115 0 3 chr10 2786322 2786636 -142802652 + AluSq SINE Alu 1 313 0 323 285 145 73 chr10 2786636 2786689 -142802599 - L2 LINE L2 -1461 1853 1805 24 0 0 0 chr10 2786711 2786735 -142802553 + AT_rich Low_complexity Low_complexity 1 24 0 1149 160 27 18 chr10 2786735 2786954 -142802334 - L1MB2 LINE L1 -3 6168 5948 384 262 0 12 chr10 2786993 2787077 -142802211 - MER5A DNA MER1_type -106 83 1 490 337 12 0 chr10 2787089 2787261 -142802027 - MER5B DNA MER1_type -4 174 1 * 935 309 182 19 chr10 2787261 2787901 -142801387 - L2 LINE L2 -1800 1514 770 502 308 140 22 chr10 2787901 2788222 -142801066 - L2 LINE L2 -2946 368 10 2177 134 3 0 chr10 2788668 2788975 -142800313 + AluSx SINE Alu 1 308 -4 2237 122 0 3 chr10 2791472 2791783 -142797505 + AluSg SINE Alu 1 310 0 9769 163 9 6 chr10 2792304 2795051 -142794237 + L1PB1 LINE L1 3394 6151 0 2094 127 3 0 chr10 2795196 2795487 -142793801 - AluSx SINE Alu -20 292 1 223 284 43 43 chr10 2795950 2796066 -142793222 + L2 LINE L2 2170 2285 -1029 396 123 15 0 chr10 2796482 2796547 -142792741 - MER41B LTR ERV1 -86 549 484 342 217 36 0 chr10 2796761 2796927 -142792361 + (TA)n Simple_repeat Simple_repeat 1 172 0 931 236 75 78 chr10 2796991 2797402 -142791886 + MLT2D LTR ERVL 1 410 -4 27 73 0 0 chr10 2799181 2799236 -142790052 + AT_rich Low_complexity Low_complexity 1 55 0 207 292 0 42 chr10 2799279 2799375 -142789913 + (TATATG)n Simple_repeat Simple_repeat 6 97 0 249 341 0 11 chr10 2800190 2800281 -142789007 + CT-rich Low_complexity Low_complexity 4 93 0 2270 119 3 0 chr10 2800938 2801248 -142788040 + AluSp SINE Alu 1 311 -2 1999 135 4 4 chr10 2801684 2802008 -142787280 + AluSx SINE Alu 3 326 0 3174 147 18 6 chr10 2802169 2802672 -142786616 - MER75 DNA T2_type -5 509 1 576 249 125 66 chr10 2803256 2803743 -142785545 - HAL1 LINE L1 -115 2392 1877 1262 293 122 52 chr10 2803840 2803899 -142785389 - HAL1 LINE L1 -794 1713 1660 2371 95 0 0 chr10 2803899 2804195 -142785093 + AluY SINE Alu 1 296 -15 1262 293 122 52 chr10 2804195 2804914 -142784374 - HAL1 LINE L1 -847 1660 837 267 54 0 0 chr10 2804914 2804951 -142784337 + (TG)n Simple_repeat Simple_repeat 2 38 0 1262 293 122 52 chr10 2804951 2805244 -142784044 - HAL1 LINE L1 -1670 837 566 234 300 71 52 chr10 2805459 2805669 -142783619 - HAL1 LINE L1 -2266 241 28 298 320 25 16 chr10 2805857 2805979 -142783309 - MIR3 SINE MIR -31 177 55 224 283 88 38 chr10 2806907 2807066 -142782222 + L2 LINE L2 2073 2239 -1075 406 317 63 10 chr10 2807085 2807290 -142781998 - MIR SINE MIR -1 261 46 396 374 94 11 chr10 2807450 2807918 -142781370 + L2 LINE L2 2361 2867 -447 304 315 128 62 chr10 2808233 2808639 -142780649 - L2 LINE L2 -337 2977 2545 376 104 30 15 chr10 2809000 2809067 -142780221 + MADE1 DNA Mariner 13 80 0 211 246 18 0 chr10 2809479 2809536 -142779752 + GA-rich Low_complexity Low_complexity 4 61 0 271 289 104 81 chr10 2810477 2810714 -142778574 + L1MC4 LINE L1 6197 6427 -1466 2275 115 3 0 chr10 2810714 2811018 -142778270 + AluSx SINE Alu 1 305 -7 271 289 104 81 chr10 2811018 2811348 -142777940 + L1MC4 LINE L1 6427 6862 -1031 186 103 0 0 chr10 2812358 2812387 -142776901 + (TATATG)n Simple_repeat Simple_repeat 4 32 0 344 307 102 49 chr10 2812431 2812636 -142776652 + HAL1b LINE L1 392 607 -741 2295 143 28 6 chr10 2812651 2813007 -142776281 - THE1B LTR MaLR 0 364 1 593 90 0 0 chr10 2813794 2813872 -142775416 - MADE1 DNA Mariner -2 78 1 235 170 21 0 chr10 2816758 2816805 -142772483 + T-rich Low_complexity Low_complexity 2 49 0 2285 185 58 28 chr10 2818085 2819219 -142770069 + L1MB2 LINE L1 6 1381 -5003 * 2321 238 70 13 chr10 2819212 2820255 -142769033 + L1MB2 LINE L1 2239 3345 -3037 6091 202 38 37 chr10 2820443 2821969 -142767319 + L1MB2 LINE L1 3952 5479 -903 3340 180 30 9 chr10 2821969 2822598 -142766690 + L1MB2 LINE L1 5756 6397 -10 198 277 106 21 chr10 2823148 2823242 -142766046 - MIR3 SINE MIR -95 113 12 214 294 35 35 chr10 2824207 2824292 -142764996 + L2 LINE L2 3179 3263 -9 1883 201 31 3 chr10 2824300 2824654 -142764634 + MLT1A1 LTR MaLR 2 365 0 21 36 0 0 chr10 2825034 2825062 -142764226 + AT_rich Low_complexity Low_complexity 1 28 0 5113 86 5 5 chr10 2825072 2825725 -142763563 + L1PA10 LINE L1 5506 6158 -10 280 261 30 37 chr10 2825815 2825949 -142763339 + L1ME4a LINE L1 5756 5888 -233 258 231 0 0 chr10 2826526 2826591 -142762697 + (CA)n Simple_repeat Simple_repeat 2 66 0 470 287 45 42 chr10 2826672 2826961 -142762327 + L1ME3A LINE L1 5667 5956 -214 1326 113 5 0 chr10 2827063 2827249 -142762039 + THE1C LTR MaLR 1 187 -188 756 219 114 0 chr10 2827249 2827450 -142761838 + L1M4 LINE L1 2451 2674 -3472 1636 248 82 42 chr10 2827595 2827919 -142761369 + L1M4 LINE L1 2897 3206 -2940 180 0 0 0 chr10 2827919 2827939 -142761349 + (CAA)n Simple_repeat Simple_repeat 2 21 0 1636 248 82 42 chr10 2827939 2828528 -142760760 + L1M4 LINE L1 3206 3847 -2299 629 340 43 24 chr10 2828534 2828955 -142760333 + L1MA9 LINE L1 580 1008 -5711 2028 208 38 25 chr10 2829460 2830049 -142759239 + L1MA9 LINE L1 1445 2039 -4680 * 2425 185 12 144 chr10 2830045 2830246 -142759042 + L1MA9 LINE L1 5532 5758 -1175 5449 44 5 2 chr10 2830246 2831287 -142758001 - SVA Other Other -954 1384 16 2425 185 12 144 chr10 2831287 2832123 -142757165 + L1MA9 LINE L1 5758 6435 -498 930 193 56 5 chr10 2832222 2832473 -142756815 + L1MA9 LINE L1 6424 6709 -101 3055 224 112 4 chr10 2832473 2833100 -142756188 + L1MB7 LINE L1 5297 6027 -157 1600 112 139 147 chr10 2833100 2833261 -142756027 + MSTA LTR MaLR 1 162 -266 2227 121 0 0 chr10 2833261 2833566 -142755722 + AluSx SINE Alu 1 305 -7 1600 112 139 147 chr10 2833566 2833834 -142755454 + MSTA LTR MaLR 162 427 -1 3055 224 112 4 chr10 2833834 2833991 -142755297 + L1MB7 LINE L1 6027 6166 -18 1481 247 34 36 chr10 2834401 2834975 -142754313 + L1ME LINE L1 5163 5739 -425 2132 122 0 0 chr10 2835109 2835405 -142753883 - AluSx SINE Alu -14 298 3 2015 158 27 27 chr10 2835407 2835775 -142753513 - Tigger2a DNA MER2_type -66 368 1 566 247 97 14 chr10 2835836 2836115 -142753173 + L1M4 LINE L1 2880 3181 -2965 28 29 0 0 chr10 2836300 2836335 -142752953 + AT_rich Low_complexity Low_complexity 1 35 0 377 321 47 69 chr10 2836781 2837343 -142751945 - L2 LINE L2 -1 3312 2766 21 0 0 0 chr10 2837499 2837520 -142751768 + AT_rich Low_complexity Low_complexity 1 21 0 1992 149 0 13 chr10 2837520 2837821 -142751467 - AluSx SINE Alu -15 297 1 2582 66 0 0 chr10 2839644 2839949 -142749339 - AluY SINE Alu -6 305 1 198 0 0 0 chr10 2840761 2840783 -142748505 + (TTTTG)n Simple_repeat Simple_repeat 3 24 0 2087 121 0 0 chr10 2840785 2841066 -142748222 - AluSx SINE Alu -31 281 1 26 23 0 23 chr10 2841276 2841290 -142747998 + AT_rich Low_complexity Low_complexity 1 14 -29 2122 102 3 3 chr10 2841290 2841574 -142747714 + AluSg1 SINE Alu 1 284 -25 26 23 0 23 chr10 2841574 2841603 -142747685 + AT_rich Low_complexity Low_complexity 14 43 0 192 302 47 38 chr10 2843621 2843727 -142745561 - L3b LINE CR1 -209 1374 1268 1723 207 42 45 chr10 2843987 2844127 -142745161 - L1MA7 LINE L1 -1 6290 6151 267 31 0 0 chr10 2844127 2844159 -142745129 + (TG)n Simple_repeat Simple_repeat 1 32 0 1723 207 42 45 chr10 2844159 2844443 -142744845 - L1MA7 LINE L1 -140 6151 5867 973 203 38 38 chr10 2844782 2845018 -142744270 + L1MCa LINE L1 21 256 -6170 * 1192 233 76 3 chr10 2845017 2845334 -142743954 + L1MCa LINE L1 787 1126 -5300 1735 153 7 7 chr10 2845563 2845838 -142743450 + AluJo SINE Alu 1 275 -37 377 273 30 15 chr10 2847084 2847216 -142742072 + MLT1H LTR MaLR 392 525 -24 400 172 164 70 chr10 2847323 2847451 -142741837 - MLT1I LTR MaLR 0 549 280 306 302 38 0 chr10 2848984 2849090 -142740198 - L1MC4 LINE L1 -1340 6702 6593 210 116 23 23 chr10 2849432 2849475 -142739813 + T-rich Low_complexity Low_complexity 5 47 0 187 54 54 0 chr10 2849636 2849673 -142739615 + (TA)n Simple_repeat Simple_repeat 2 40 0 282 157 58 25 chr10 2849853 2850039 -142739249 + (TA)n Simple_repeat Simple_repeat 1 192 0 1452 255 42 0 chr10 2850956 2851289 -142737999 + MER7A DNA MER2_type 1 345 -1 2578 219 16 66 chr10 2851374 2851802 -142737486 + MER82 DNA MER2_type 1 384 -269 2126 135 0 0 chr10 2851802 2852131 -142737157 + AluSx SINE Alu 1 312 0 2578 219 16 66 chr10 2852131 2852381 -142736907 + MER82 DNA MER2_type 384 645 -8 264 286 14 0 chr10 2852454 2852524 -142736764 + MER46C DNA MER2_type 259 329 -9 1600 279 139 16 chr10 2853021 2853763 -142735525 + MER97b DNA MER1_type? 4 836 -217 24 67 0 0 chr10 2853967 2854012 -142735276 + AT_rich Low_complexity Low_complexity 1 45 0 264 187 77 66 chr10 2854016 2854107 -142735181 + MER97a DNA MER1_type? 795 886 -8 276 186 114 0 chr10 2855100 2855170 -142734118 - MER116 DNA Mariner -2 78 1 1768 144 3 144 chr10 2855265 2855655 -142733633 - MER1B DNA MER1_type -2 335 1 527 304 126 34 chr10 2856052 2856435 -142732853 + L2 LINE L2 1520 1945 -1369 1464 237 62 27 chr10 2856435 2856886 -142732402 - MLT1C LTR MaLR 0 467 1 527 304 126 34 chr10 2856886 2856916 -142732372 + L2 LINE L2 1945 1971 -1343 861 234 7 57 chr10 2856920 2857202 -142732086 + MLT1B LTR MaLR 1 268 -122 302 277 66 7 chr10 2857202 2857339 -142731949 + L2 LINE L2 2332 2476 -838 1113 128 122 0 chr10 2857347 2857527 -142731761 - AluJb SINE Alu -25 287 86 339 330 130 15 chr10 2857628 2858021 -142731267 + L2 LINE L2 2622 3066 -247 2697 35 3 0 chr10 2860958 2861268 -142728020 - AluY SINE Alu 0 311 1 24 0 0 0 chr10 2861469 2861493 -142727795 + GC_rich Low_complexity Low_complexity 1 24 0 1622 205 76 12 chr10 2861921 2862331 -142726957 - L1MDa LINE L1 -4297 2243 1808 * 2579 275 182 17 chr10 2862322 2863316 -142725972 - L1MDa LINE L1 -5339 1201 44 867 198 11 84 chr10 2863351 2863614 -142725674 - MLT1A2 LTR MaLR 0 374 131 24 32 0 0 chr10 2863617 2863648 -142725640 + AT_rich Low_complexity Low_complexity 1 31 0 227 208 0 19 chr10 2864461 2864514 -142724774 + CT-rich Low_complexity Low_complexity 2 53 0 379 218 0 0 chr10 2865244 2865331 -142723957 - L1MA9 LINE L1 0 6312 6226 22 70 0 0 chr10 2865840 2865883 -142723405 + AT_rich Low_complexity Low_complexity 1 43 0 1829 122 0 0 chr10 2869305 2869552 -142719736 + AluSx SINE Alu 42 288 -24 1181 74 4 8 chr10 2869555 2869817 -142719471 + (GAAA)n Simple_repeat Simple_repeat 1 261 0 297 0 0 0 chr10 2870036 2870069 -142719219 + (TA)n Simple_repeat Simple_repeat 2 34 0 581 296 100 17 chr10 2871442 2871672 -142717616 - MIR SINE MIR -11 251 3 900 124 49 27 chr10 2973060 2973285 -142616003 + AluY SINE Alu 81 310 -1 180 111 0 0 chr10 2973829 2973856 -142615432 + (CATATA)n Simple_repeat Simple_repeat 2 28 0 2219 223 43 8 chr10 2975299 2975806 -142613482 - MER74A LTR ERVL 0 558 34 2050 98 3 57 chr10 2976176 2976492 -142612796 + AluSg SINE Alu 1 299 -11 4480 207 44 27 chr10 2977165 2977312 -142611976 - L1MB7 LINE L1 -9 6175 6032 2352 81 0 0 chr10 2977312 2977620 -142611668 + AluY SINE Alu 1 308 -3 4480 207 44 27 chr10 2977620 2979396 -142609892 - L1MB7 LINE L1 -152 6032 4219 343 308 39 0 chr10 2979411 2979541 -142609747 - MIR SINE MIR -6 256 122 875 240 56 65 chr10 2980549 2981078 -142608210 + MLT1E LTR MaLR 21 593 0 270 0 0 0 chr10 2981225 2981255 -142608033 + (A)n Simple_repeat Simple_repeat 1 30 0 234 263 0 0 chr10 2981575 2981632 -142607656 + (CA)n Simple_repeat Simple_repeat 1 57 0 297 276 162 17 chr10 2982130 2982278 -142607010 - MER5A DNA MER1_type -5 184 7 1211 223 51 3 chr10 2983487 2983662 -142605626 - AluJb SINE Alu -5 307 111 270 0 0 0 chr10 2983662 2983692 -142605596 + (TTTA)n Simple_repeat Simple_repeat 3 32 0 1211 223 51 3 chr10 2983692 2983808 -142605480 - AluJb SINE Alu -201 111 2 1740 170 10 0 chr10 2984000 2984300 -142604988 - AluJo SINE Alu -9 303 1 867 157 4 6 chr10 2985162 2985883 -142603405 + (CTCA)n Simple_repeat Simple_repeat 1 720 0 922 163 3 12 chr10 2985903 2985940 -142603348 + (CTCA)n Simple_repeat Simple_repeat 1 37 -1675 6122 114 25 28 chr10 2985940 2986912 -142602376 + LTR5 LTR ERVK 1 969 0 922 163 3 12 chr10 2986912 2987631 -142601657 + (CTCA)n Simple_repeat Simple_repeat 37 1712 0 237 337 116 35 chr10 2987632 2988003 -142601285 - L2 LINE L2 -1 3312 2912 662 268 45 15 chr10 2988415 2988613 -142600675 + MER20 DNA MER1_type 16 219 0 1938 99 50 7 chr10 2988944 2989227 -142600061 - AluSx SINE Alu -17 295 1 3676 25 0 7 chr10 2989962 2990396 -142598892 - L1PA5 LINE L1 0 6154 5724 297 83 0 33 chr10 2990614 2990674 -142598614 - L1MA4A LINE L1 -1 6302 6245 227 231 46 0 chr10 2990683 2990748 -142598540 - L1MB4 LINE L1 -2 6178 6111 1293 219 77 41 chr10 2990782 2990901 -142598387 - L1MA4 LINE L1 -294 6006 5893 2055 98 3 7 chr10 2990901 2991198 -142598090 - AluSq SINE Alu -13 300 5 1293 219 77 41 chr10 2991198 2991466 -142597822 - L1MA4 LINE L1 -407 5893 5605 711 158 29 53 chr10 2991465 2991621 -142597667 - L1MA4 LINE L1 -44 6256 6105 * 215 211 21 42 chr10 2991624 2991719 -142597569 + (TTATA)n Simple_repeat Simple_repeat 2 94 0 1266 165 29 98 chr10 2991734 2992080 -142597208 - L1MA4 LINE L1 -192 6108 5787 484 194 43 0 chr10 2992080 2992187 -142597101 + L1ME LINE L1 5724 5834 -287 1446 152 115 0 chr10 2993502 2993771 -142595517 + AluSx SINE Alu 2 301 -11 590 132 0 0 chr10 2995245 2995336 -142593952 + AluY SINE Alu 219 309 -2 1785 175 62 73 chr10 2995363 2995802 -142593486 + Tigger2a DNA MER2_type 1 434 0 243 0 0 0 chr10 2996247 2996274 -142593014 + (CA)n Simple_repeat Simple_repeat 2 28 0 206 235 0 10 chr10 2996275 2996373 -142592915 + GA-rich Low_complexity Low_complexity 2 98 0 294 239 0 0 chr10 2996392 2996505 -142592783 + GA-rich Low_complexity Low_complexity 2 114 0 1809 196 38 30 chr10 2996950 2997082 -142592206 + MSTD LTR MaLR 1 130 -266 2302 93 0 3 chr10 2997082 2997394 -142591894 - AluY SINE Alu 0 311 1 1809 196 38 30 chr10 2997394 2997654 -142591634 + MSTD LTR MaLR 130 396 0 857 297 26 62 chr10 2998430 2998922 -142590366 + MLT1J LTR MaLR 1 511 0 234 263 53 13 chr10 2998994 2999070 -142590218 - MIR3 SINE MIR -23 185 107 1215 126 16 11 chr10 2999090 2999280 -142590008 - MER4C LTR ERV1 0 465 275 213 282 0 0 chr10 2999336 2999510 -142589778 + G-rich Low_complexity Low_complexity 5 178 0 1739 147 47 13 chr10 2999554 2999853 -142589435 - MER4C LTR ERV1 -156 309 1 2411 86 28 81 chr10 3000913 3001310 -142587978 + MER51B LTR ERV1 2 377 0 2266 83 3 10 chr10 3001340 3001653 -142587635 - AluY SINE Alu 0 311 1 592 137 11 11 chr10 3001884 3001979 -142587309 + AluSp/q SINE Alu 208 302 -11 2104 246 94 81 chr10 3002085 3002367 -142586921 + L1ME1 LINE L1 4693 4970 -1196 1187 55 0 22 chr10 3002367 3002548 -142586740 + (GAAA)n Simple_repeat Simple_repeat 4 180 0 2274 61 7 7 chr10 3002551 3002846 -142586442 + AluY SINE Alu 1 295 -16 2104 246 94 81 chr10 3002846 3003541 -142585747 + L1ME1 LINE L1 4971 5656 -510 1588 157 0 83 chr10 3003541 3003879 -142585409 + AluJo SINE Alu 3 312 0 2104 246 94 81 chr10 3003879 3003921 -142585367 + L1ME1 LINE L1 5656 5696 -470 4011 50 2 4 chr10 3003921 3004417 -142584871 - L1PA3 LINE L1 -1 6154 5660 2104 246 94 81 chr10 3004417 3004840 -142584448 + L1ME1 LINE L1 5696 6161 -5 1929 118 4 0 chr10 3005217 3005497 -142583791 - AluSq SINE Alu -32 281 1 1896 140 0 7 chr10 3006257 3006543 -142582745 + AluJo SINE Alu 3 286 -26 351 0 0 0 chr10 3006566 3006605 -142582683 + (TA)n Simple_repeat Simple_repeat 2 40 0 2051 136 0 0 chr10 3006605 3006906 -142582382 - AluSx SINE Alu -8 304 1 305 274 53 26 chr10 3007498 3007611 -142581677 + MER112 DNA MER1_type 87 202 -58 810 184 0 0 chr10 3009473 3009652 -142579636 + CT-rich Low_complexity Low_complexity 1 179 0 2005 147 0 28 chr10 3010987 3011307 -142577981 - AluSx SINE Alu -1 311 1 259 278 90 21 chr10 3011408 3011552 -142577736 + L1MEd LINE L1 5 158 -5961 271 280 99 56 chr10 3012115 3012347 -142576941 + L1ME LINE L1 5614 5855 -315 2166 115 3 16 chr10 3012613 3012926 -142576362 - AluSp SINE Alu -4 309 1 310 215 223 8 chr10 3012985 3013115 -142576173 - MER104 DNA Tc2 -5 175 18 1835 138 50 44 chr10 3013302 3013664 -142575624 - THE1B LTR MaLR 0 364 1 198 310 14 0 chr10 3014044 3014115 -142575173 - MIR SINE MIR -33 229 158 784 159 0 0 chr10 3015127 3015259 -142574029 + FLAM_C SINE Alu 1 132 -1 198 305 179 13 chr10 3016048 3016199 -142573089 - MIR SINE MIR -1 261 86 1559 173 41 11 chr10 3016285 3016425 -142572863 - AluJo SINE Alu -38 274 140 243 0 0 0 chr10 3016425 3016452 -142572836 + (TTA)n Simple_repeat Simple_repeat 2 28 0 1559 173 41 11 chr10 3016452 3016577 -142572711 - AluJo SINE Alu -172 140 1 207 0 0 0 chr10 3016896 3016919 -142572369 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 222 118 0 0 chr10 3016954 3016988 -142572300 + (T)n Simple_repeat Simple_repeat 1 34 0 186 277 84 0 chr10 3017412 3017495 -142571793 - MIR SINE MIR -113 149 60 197 304 51 0 chr10 3017528 3017607 -142571681 + L2 LINE L2 3179 3261 -11 1963 133 3 11 chr10 3019356 3019669 -142569619 - AluSx SINE Alu 0 311 1 181 219 94 0 chr10 3019917 3019981 -142569307 - L2 LINE L2 -516 2798 2729 183 80 0 0 chr10 3020010 3020035 -142569253 + (GGGGA)n Simple_repeat Simple_repeat 3 27 0 3420 114 8 4 chr10 3020347 3020856 -142568432 - MER9 LTR ERVK 0 511 1 225 196 0 0 chr10 3021076 3021122 -142568166 - Charlie5 DNA MER1_type -17 2595 2550 1825 169 3 10 chr10 3021149 3021451 -142567837 + AluJo SINE Alu 3 302 -10 1052 25 0 0 chr10 3021454 3021574 -142567714 + AluYb8 SINE Alu 199 318 0 293 262 79 0 chr10 3021599 3021725 -142567563 - Charlie5 DNA MER1_type -114 2498 2363 351 249 66 95 chr10 3021922 3022271 -142567017 + L2 LINE L2 2951 3289 -24 2523 76 0 19 chr10 3022777 3023092 -142566196 - AluSc SINE Alu 0 309 1 196 333 40 30 chr10 3024149 3024248 -142565040 + MIR SINE MIR 34 133 -129 227 216 162 0 chr10 3024496 3024570 -142564718 + MER5A DNA MER1_type 42 127 -62 2584 55 0 0 chr10 3024768 3025060 -142564228 - AluY SINE Alu -19 292 1 1290 266 130 40 chr10 3026306 3027163 -142562125 + L1ME1 LINE L1 5214 6150 -16 1542 109 0 0 chr10 3027420 3027622 -142561666 - AluY SINE Alu 0 311 110 1853 154 3 39 chr10 3029022 3029333 -142559955 + AluJb SINE Alu 1 300 -12 181 289 52 31 chr10 3034666 3034763 -142554525 + MIR SINE MIR 152 250 -12 427 263 143 19 chr10 3035660 3035869 -142553419 - MIR SINE MIR -19 243 9 21 36 0 0 chr10 3036355 3036383 -142552905 + AT_rich Low_complexity Low_complexity 1 28 0 1849 182 3 6 chr10 3036394 3036707 -142552581 - AluJo SINE Alu 0 312 1 1696 159 32 0 chr10 3040008 3040285 -142549003 + AluJo SINE Alu 16 301 -11 979 202 214 9 chr10 3040794 3041229 -142548059 + Tigger7 DNA MER2_type 1 2479 -8 738 148 42 7 chr10 3041401 3041543 -142547745 + AluJb SINE Alu 136 282 -30 222 128 0 0 chr10 3041561 3041600 -142547688 + (TAGG)n Simple_repeat Simple_repeat 1 39 0 2169 98 0 4 chr10 3044968 3045243 -142544045 - AluSc SINE Alu -35 274 1 337 276 45 45 chr10 3046349 3046505 -142542783 + L1M4 LINE L1 3691 3846 -2300 190 284 74 21 chr10 3047159 3047254 -142542034 + MIR3 SINE MIR 9 108 -100 2138 129 0 0 chr10 3047496 3047783 -142541505 + AluSx SINE Alu 1 287 -25 1301 176 38 31 chr10 3048152 3048413 -142540875 + Tigger7 DNA MER2_type 5 267 -466 316 261 11 11 chr10 3048410 3048502 -142540786 + Tigger7 DNA MER2_type 2388 2479 -8 * 242 240 0 0 chr10 3048865 3048915 -142540373 - L2 LINE L2 -2 3270 3221 2306 110 0 7 chr10 3049468 3049776 -142539512 + AluSx SINE Alu 1 306 -6 775 194 203 13 chr10 3049852 3050084 -142539204 - Tigger3(Golem) DNA MER2_type 0 3038 2763 36 62 0 0 chr10 3050101 3050165 -142539123 + AT_rich Low_complexity Low_complexity 1 64 0 289 159 286 0 chr10 3050181 3050244 -142539044 - Tigger3(Golem) DNA MER2_type -2947 82 2 2260 97 10 0 chr10 3050371 3050660 -142538628 + AluSg SINE Alu 2 293 -17 225 90 15 134 chr10 3052387 3052454 -142536834 + MLT1E2 LTR MaLR 2 60 -566 373 241 77 65 chr10 3052926 3053096 -142536192 + L2 LINE L2 3095 3266 -6 248 351 38 5 chr10 3056972 3057183 -142532105 + MER46C DNA MER2_type 121 338 0 417 295 74 0 chr10 3058247 3058437 -142530851 - MER20 DNA MER1_type 0 219 16 1868 161 3 19 chr10 3059110 3059427 -142529861 + AluJb SINE Alu 1 312 0 1094 161 0 0 chr10 3060408 3060576 -142528712 + AluJb SINE Alu 134 301 -11 2498 77 3 0 chr10 3061836 3062146 -142527142 - AluSx SINE Alu -1 311 1 530 154 11 0 chr10 3063173 3063264 -142526024 - AluSc SINE Alu -213 96 5 396 299 62 14 chr10 3065595 3065806 -142523482 + L2 LINE L2 2050 2270 -1044 440 297 175 25 chr10 3066294 3066648 -142522640 + L2 LINE L2 2396 2802 -512 207 271 66 74 chr10 3066907 3067005 -142522283 + L2 LINE L2 3182 3280 -33 2391 101 0 0 chr10 3067005 3067302 -142521986 + AluSx SINE Alu 1 297 -15 207 271 66 74 chr10 3067302 3067325 -142521963 + L2 LINE L2 3280 3302 -11 343 280 136 0 chr10 3067410 3067535 -142521753 + MIR SINE MIR 111 252 -10 1470 127 0 51 chr10 3068593 3068829 -142520459 + AluSx SINE Alu 7 230 -82 362 322 96 0 chr10 3069783 3069929 -142519359 + MIR SINE MIR 87 246 -16 368 309 3 3 chr10 3070096 3070469 -142518819 + (CA)n Simple_repeat Simple_repeat 1 373 0 275 258 12 12 chr10 3070487 3070650 -142518638 + (CA)n Simple_repeat Simple_repeat 2 164 0 261 219 0 0 chr10 3070740 3070813 -142518475 + (CA)n Simple_repeat Simple_repeat 2 74 0 2261 74 7 58 chr10 3070968 3071277 -142518011 + AluY SINE Alu 1 293 -18 250 339 17 17 chr10 3073245 3073363 -142515925 + MIR3 SINE MIR 86 203 -5 590 239 3 43 chr10 3074471 3074824 -142514464 + G-rich Low_complexity Low_complexity 1 338 0 222 301 0 46 chr10 3074836 3074989 -142514299 + (CTAGGG)n Simple_repeat Simple_repeat 1 146 0 218 295 0 39 chr10 3075491 3075569 -142513719 + G-rich Low_complexity Low_complexity 1 75 0 1581 160 82 7 chr10 3078419 3078701 -142510587 - AluJo SINE Alu -9 303 1 1910 92 0 82 chr10 3079369 3079672 -142509616 + AluSx SINE Alu 35 312 0 180 0 0 0 chr10 3080665 3080685 -142508603 + (T)n Simple_repeat Simple_repeat 1 20 0 308 64 21 0 chr10 3081463 3081510 -142507778 + (CA)n Simple_repeat Simple_repeat 1 48 0 2312 100 0 0 chr10 3082578 3082867 -142506421 - AluSg SINE Alu -21 289 1 28 0 0 0 chr10 3084297 3084325 -142504963 + GC_rich Low_complexity Low_complexity 1 28 0 216 170 0 0 chr10 3084373 3084426 -142504862 + G-rich Low_complexity Low_complexity 6 58 0 306 342 17 8 chr10 3086357 3086477 -142502811 + MIR SINE MIR 30 150 -112 189 263 105 75 chr10 3086562 3086695 -142502593 - MIR SINE MIR -55 207 71 197 319 71 26 chr10 3087275 3087388 -142501900 - L2 LINE L2 -36 3236 3119 181 320 39 0 chr10 3087511 3087589 -142501699 - MIR SINE MIR -130 132 52 453 309 17 33 chr10 3087603 3087784 -142501504 + MIR SINE MIR 58 235 -27 1662 102 26 4 chr10 3089548 3089774 -142499514 - AluSg/x SINE Alu -9 301 71 1956 182 5 16 chr10 3089812 3090181 -142499107 + MLT1A1 LTR MaLR 1 365 0 355 275 132 18 chr10 3090281 3090448 -142498840 + MER5A DNA MER1_type 1 186 -3 1007 218 34 103 chr10 3090970 3091350 -142497938 + MLT1J LTR MaLR 1 354 -157 187 405 56 8 chr10 3091419 3091545 -142497743 - L2 LINE L2 -25 3247 3116 1167 281 49 85 chr10 3091761 3092583 -142496705 + L1MC5 LINE L1 6730 7521 -440 24 32 0 0 chr10 3094557 3094588 -142494700 + AT_rich Low_complexity Low_complexity 1 31 0 335 327 65 0 chr10 3094657 3094871 -142494417 + L1MC/D LINE L1 5576 5803 -2005 1939 158 14 0 chr10 3095109 3095406 -142493882 + AluSx SINE Alu 1 301 -11 2300 110 7 0 chr10 3095795 3096096 -142493192 + AluSc SINE Alu 1 303 -6 983 243 156 30 chr10 3096584 3096885 -142492403 + MLT2C1 LTR ERVL 1 339 -58 377 70 18 0 chr10 3096885 3096942 -142492346 + (TCTA)n Simple_repeat Simple_repeat 4 61 0 709 265 12 0 chr10 3096944 3097114 -142492174 - ERVL LTR ERVL -5104 660 489 1707 253 48 14 chr10 3097137 3097290 -142491998 + ERVL-C1 LTR ERVL 252 398 -5366 2342 68 0 4 chr10 3097290 3097569 -142491719 - AluY SINE Alu -10 301 24 1707 253 48 14 chr10 3097569 3097854 -142491434 + ERVL-C1 LTR ERVL 398 705 -5059 331 352 31 48 chr10 3097965 3098317 -142490971 + ERVL LTR ERVL 4908 5253 -511 512 278 73 20 chr10 3098640 3098885 -142490403 + LTR16C LTR ERVL 232 489 -2 210 222 37 19 chr10 3099381 3099435 -142489853 - MIR SINE MIR -102 160 106 1895 146 0 0 chr10 3100680 3100948 -142488340 + AluSx SINE Alu 27 294 -18 205 132 57 19 chr10 3100980 3101033 -142488255 + T-rich Low_complexity Low_complexity 4 58 0 4352 96 3 0 chr10 3101054 3101670 -142487618 - L1PA10 LINE L1 -11 6157 5540 599 317 77 35 chr10 3102043 3102418 -142486870 - MLT1L LTR MaLR -224 391 1 2585 74 0 0 chr10 3102647 3102957 -142486331 - AluY SINE Alu -1 310 1 3512 211 45 22 chr10 3104181 3104530 -142484758 - L1MB3 LINE L1 -2 6181 5842 2640 52 0 3 chr10 3104530 3104838 -142484450 - AluY SINE Alu -4 307 1 3512 211 45 22 chr10 3104838 3105356 -142483932 - L1MB3 LINE L1 -341 5842 5294 1614 200 43 3 chr10 3105396 3105696 -142483592 + AluJo SINE Alu 1 312 0 2346 174 12 7 chr10 3105722 3106146 -142483142 + MSTB LTR MaLR 1 426 0 191 284 37 25 chr10 3106520 3106601 -142482687 - MIR SINE MIR -153 109 28 975 259 34 39 chr10 3106695 3107050 -142482238 - MLT2D LTR ERVL 0 414 62 316 309 32 42 chr10 3107402 3107619 -142481669 - L2 LINE L2 -5 3308 3094 239 93 481 0 chr10 3107741 3107795 -142481493 + MADE1 DNA Mariner 1 80 0 21 0 0 0 chr10 3108598 3108619 -142480669 + AT_rich Low_complexity Low_complexity 1 21 0 279 0 0 0 chr10 3109089 3109120 -142480168 + (GA)n Simple_repeat Simple_repeat 2 32 0 22 35 0 0 chr10 3109366 3109395 -142479893 + AT_rich Low_complexity Low_complexity 1 29 0 5599 140 32 1 chr10 3109543 3110720 -142478568 + L1PB2 LINE L1 4936 6149 -2 22 0 0 0 chr10 3110914 3110936 -142478352 + AT_rich Low_complexity Low_complexity 1 22 0 331 335 108 19 chr10 3111419 3111631 -142477657 - MIR SINE MIR -16 246 16 2183 105 0 7 chr10 3111679 3111983 -142477305 + AluSx SINE Alu 11 312 0 391 300 46 15 chr10 3112108 3112238 -142477050 + MIR SINE MIR 110 243 -19 23 0 0 0 chr10 3113048 3113071 -142476217 + AT_rich Low_complexity Low_complexity 1 23 0 2435 104 28 8 chr10 3113362 3113719 -142475569 - THE1B LTR MaLR 0 364 1 1501 179 42 28 chr10 3114991 3115348 -142473940 + L1MA4A LINE L1 5941 6302 -1 2451 51 0 0 chr10 3116302 3116598 -142472690 - AluY SINE Alu -7 304 9 560 291 86 42 chr10 3118029 3118438 -142470850 - MARNA DNA Mariner -134 452 26 2402 63 0 0 chr10 3119460 3119763 -142469525 + AluY SINE Alu 1 303 -8 408 252 26 43 chr10 3170472 3170587 -142418701 - L1MC4 LINE L1 -1340 6702 6590 300 271 83 10 chr10 3170511 3170607 -142418681 + L1MC3 LINE L1 6571 6673 -1112 * 1189 213 0 0 chr10 3171993 3172223 -142417065 - Tigger5 DNA MER2_type 0 2323 2094 1938 155 7 3 chr10 3173267 3173564 -142415724 - AluJo SINE Alu -14 298 1 498 226 88 13 chr10 3174264 3174412 -142414876 + MLT1B LTR MaLR 2 164 -226 1866 85 0 0 chr10 3174412 3174647 -142414641 + AluSc SINE Alu 67 301 -8 406 211 11 0 chr10 3174706 3174881 -142414407 + CT-rich Low_complexity Low_complexity 2 178 0 * 664 102 0 75 chr10 3174847 3175034 -142414254 + (TCTCTG)n Simple_repeat Simple_repeat 2 174 0 829 213 6 0 chr10 3175067 3175236 -142414052 + MLT1B LTR MaLR 205 374 -16 279 365 171 0 chr10 3176610 3176821 -142412467 + MIR SINE MIR 16 262 0 2472 96 0 6 chr10 3177147 3177459 -142411829 - AluSq SINE Alu 0 313 4 279 53 0 26 chr10 3177857 3177895 -142411393 - L2 LINE L2 -15 3298 3262 255 154 0 0 chr10 3177862 3177901 -142411387 - MIR SINE MIR -13 249 211 * 1355 37 0 0 chr10 3178093 3178255 -142411033 - L1PA5 LINE L1 -2 6152 5991 215 31 31 0 chr10 3180084 3180116 -142409172 + (TCTA)n Simple_repeat Simple_repeat 2 34 0 22 0 0 0 chr10 3180178 3180200 -142409088 + AT_rich Low_complexity Low_complexity 1 22 0 836 161 0 0 chr10 3180200 3180324 -142408964 - AluJb SINE Alu -188 124 1 813 158 68 6 chr10 3180327 3180504 -142408784 - L1MB3 LINE L1 -45 6138 5951 257 276 0 0 chr10 3181123 3181181 -142408107 + (CA)n Simple_repeat Simple_repeat 1 58 0 500 243 112 67 chr10 3181347 3181660 -142407628 + HAL1b LINE L1 554 880 -468 2193 112 0 10 chr10 3181683 3181995 -142407293 + AluSc SINE Alu 1 309 0 21 0 0 0 chr10 3182060 3182081 -142407207 + AT_rich Low_complexity Low_complexity 1 21 0 2330 110 0 3 chr10 3182089 3182397 -142406891 + AluSx SINE Alu 1 307 -5 1119 114 16 22 chr10 3182502 3182686 -142406602 - MER30B DNA MER1_type -7 183 1 1665 157 54 0 chr10 3183296 3183467 -142405821 - AluJb SINE Alu -4 308 115 266 0 0 29 chr10 3183467 3183502 -142405786 + (TTTA)n Simple_repeat Simple_repeat 2 35 0 1665 157 54 0 chr10 3183502 3183610 -142405678 - AluJb SINE Alu -197 115 14 1260 94 0 0 chr10 3183830 3184122 -142405166 + (TCCA)n Simple_repeat Simple_repeat 1 292 0 1234 116 0 9 chr10 3184135 3184495 -142404793 + (TCCA)n Simple_repeat Simple_repeat 1 536 0 306 0 0 0 chr10 3184495 3184529 -142404759 + (TCTA)n Simple_repeat Simple_repeat 1 34 0 835 144 34 0 chr10 3184529 3184675 -142404613 - L1MA9 LINE L1 0 6312 6162 395 152 29 0 chr10 3186568 3186673 -142402615 + (CACCAT)n Simple_repeat Simple_repeat 3 110 0 274 212 25 0 chr10 3186725 3186843 -142402445 + (CACCAT)n Simple_repeat Simple_repeat 2 122 0 228 325 0 0 chr10 3186860 3186943 -142402345 + (CAT)n Simple_repeat Simple_repeat 2 84 0 738 123 9 0 chr10 3186943 3187057 -142402231 - THE1C LTR MaLR 0 375 261 465 174 26 19 chr10 3189265 3189420 -142399868 + (ATGGTG)n Simple_repeat Simple_repeat 4 159 0 367 255 0 22 chr10 3189470 3189577 -142399711 + (ATGGTG)n Simple_repeat Simple_repeat 1 109 -450 1807 133 63 84 chr10 3189577 3189959 -142399329 + THE1C LTR MaLR 2 375 0 367 255 0 22 chr10 3189959 3190042 -142399246 + (ATGGTG)n Simple_repeat Simple_repeat 109 559 0 274 212 25 0 chr10 3190059 3190177 -142399111 + (ATGGTG)n Simple_repeat Simple_repeat 2 122 0 395 152 29 0 chr10 3190229 3190334 -142398954 + (ATGGTG)n Simple_repeat Simple_repeat 3 110 0 189 297 78 0 chr10 3190900 3190964 -142398324 - MIR SINE MIR -96 166 98 32 26 0 0 chr10 3191209 3191248 -142398040 + AT_rich Low_complexity Low_complexity 1 39 0 2478 85 0 3 chr10 3191473 3191780 -142397508 + AluSx SINE Alu 1 306 -6 313 203 63 76 chr10 3192678 3192836 -142396452 - L1MC5 LINE L1 -48 7913 7758 2094 132 0 0 chr10 3193090 3193403 -142395885 + AluSx SINE Alu 1 313 0 231 271 0 17 chr10 3193560 3193619 -142395669 - L2 LINE L2 -2 3270 3213 211 312 104 24 chr10 3194904 3195029 -142394259 - L2 LINE L2 -41 3231 3097 256 324 128 0 chr10 3195066 3195168 -142394120 - MIR SINE MIR -74 188 74 303 296 55 78 chr10 3195927 3196184 -142393104 + L1ME4a LINE L1 5839 6089 -32 267 330 78 0 chr10 3197408 3197511 -142391777 - MIR3 SINE MIR -5 203 93 2180 100 4 0 chr10 3198959 3199240 -142390048 - AluSg SINE Alu -12 298 17 808 139 29 40 chr10 3199447 3199620 -142389668 + MER53 DNA DNA 1 171 -18 2254 86 38 3 chr10 3200227 3200519 -142388769 + AluY SINE Alu 1 302 -9 435 248 62 25 chr10 3200531 3200692 -142388596 - MER96B DNA MER1_type? -151 266 100 22 0 0 0 chr10 3202774 3202796 -142386492 + AT_rich Low_complexity Low_complexity 1 22 0 358 289 58 16 chr10 3203975 3204096 -142385192 - MIR SINE MIR -116 146 21 2307 89 7 3 chr10 3204580 3204873 -142384415 + AluSp SINE Alu 1 294 -19 302 304 9 18 chr10 3205602 3205714 -142383574 + (CA)n Simple_repeat Simple_repeat 2 112 0 510 168 23 12 chr10 3205966 3206139 -142383149 + (TG)n Simple_repeat Simple_repeat 1 175 0 499 151 29 17 chr10 3206192 3206364 -142382924 + (TG)n Simple_repeat Simple_repeat 1 174 0 616 167 27 6 chr10 3206436 3206774 -142382514 + (TG)n Simple_repeat Simple_repeat 1 345 0 1102 117 43 0 chr10 3207342 3207505 -142381783 + AluSc SINE Alu 129 298 -11 207 324 15 0 chr10 3209823 3209891 -142379397 + (TCCA)n Simple_repeat Simple_repeat 4 72 0 2219 121 0 0 chr10 3210741 3211038 -142378250 + AluSx SINE Alu 1 297 -15 1752 197 0 10 chr10 3211648 3211958 -142377330 + AluJb SINE Alu 1 307 -5 2219 71 0 17 chr10 3214303 3214599 -142374689 + AluY SINE Alu 7 297 -14 310 362 29 49 chr10 3215709 3215952 -142373336 - MIR SINE MIR -10 252 15 200 167 0 0 chr10 3217290 3217320 -142371968 + polypurine Low_complexity Low_complexity 3 32 0 327 272 76 11 chr10 3217493 3217585 -142371703 + MIR SINE MIR 13 110 -152 1467 181 38 2 chr10 3217628 3217999 -142371289 - MER65A LTR ERV1 0 445 4 217 323 15 0 chr10 3217999 3218064 -142371224 + MIR SINE MIR 162 227 -35 552 287 184 17 chr10 3218207 3218555 -142370733 + MLT1J LTR MaLR 104 509 -2 600 227 41 23 chr10 3218968 3219140 -142370148 + MER5B DNA MER1_type 1 175 -3 315 179 269 0 chr10 3219157 3219235 -142370053 + MER5A DNA MER1_type 8 106 -83 263 300 50 0 chr10 3220475 3220555 -142368733 - L2 LINE L2 0 3313 3230 2086 184 21 7 chr10 3220812 3221242 -142368046 + L1MB3 LINE L1 5746 6181 -2 203 77 0 26 chr10 3221285 3221324 -142367964 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 1508 149 3 73 chr10 3221327 3221629 -142367659 - AluJo SINE Alu -31 281 1 394 222 176 0 chr10 3221986 3222094 -142367194 - FLAM_C SINE Alu -1 132 6 215 31 31 0 chr10 3222594 3222626 -142366662 + (TGG)n Simple_repeat Simple_repeat 1 33 0 1848 137 7 3 chr10 3222992 3223284 -142366004 + AluSx SINE Alu 1 293 -19 247 224 60 30 chr10 3223673 3223740 -142365548 + L2 LINE L2 3204 3272 0 1333 235 30 12 chr10 3223848 3224197 -142365091 - MLT1A1 LTR MaLR -6 359 1 2117 107 3 0 chr10 3224271 3224560 -142364728 - AluSx SINE Alu -21 291 2 3259 103 50 57 chr10 3228478 3229078 -142360210 - MER4A LTR ERV1 0 600 5 583 111 0 0 chr10 3229774 3229864 -142359424 - HERVFH19I LTR ERV1 -3634 4085 3996 529 335 44 7 chr10 3229903 3230196 -142359092 - L2 LINE L2 -1226 2088 1785 278 213 50 106 chr10 3230206 3230366 -142358922 - MLT1J1 LTR MaLR -3 443 293 261 233 17 0 chr10 3230485 3230545 -142358743 - MLT1J2 LTR MaLR -321 129 69 1115 235 44 65 chr10 3230565 3231023 -142358265 + MLT2B1 LTR ERVL 2 458 -6 186 261 81 45 chr10 3231073 3231184 -142358104 - L2 LINE L2 -1559 1755 1641 194 311 126 24 chr10 3231216 3231422 -142357866 - L2 LINE L2 -1669 1645 1419 781 156 0 0 chr10 3231667 3231825 -142357463 - FRAM SINE Alu 0 183 26 284 250 60 24 chr10 3233343 3233427 -142355861 + MARNA DNA Mariner 44 130 -456 2034 103 21 0 chr10 3233479 3233760 -142355528 - AluSx SINE Alu -3 309 23 253 145 43 43 chr10 3233789 3233858 -142355430 - MARNA DNA Mariner -234 352 284 390 69 0 0 chr10 3233895 3233953 -142355335 + (TG)n Simple_repeat Simple_repeat 1 58 0 3062 217 63 25 chr10 3234558 3235640 -142353648 + L1MD2 LINE L1 4906 6032 -327 1564 245 24 37 chr10 3235647 3236112 -142353176 - MLT1C LTR MaLR -1 466 8 525 261 20 7 chr10 3236216 3236369 -142352919 + L1MD2 LINE L1 6195 6349 -10 196 236 36 18 chr10 3238495 3238550 -142350738 - L2 LINE L2 -11 3302 3247 783 134 7 13 chr10 3238714 3238863 -142350425 + (TTCC)n Simple_repeat Simple_repeat 1 148 0 1544 168 13 42 chr10 3238863 3239173 -142350115 - AluJo SINE Alu -5 307 7 1014 106 99 0 chr10 3239199 3239350 -142349938 + AluSg/x SINE Alu 135 300 -12 588 309 55 4 chr10 3239827 3240063 -142349225 - MLT1H LTR MaLR -222 327 80 192 266 0 119 chr10 3240141 3240250 -142349038 - MIR SINE MIR -79 183 88 21 36 0 0 chr10 3240570 3240598 -142348690 + AT_rich Low_complexity Low_complexity 1 28 0 2053 122 3 0 chr10 3240599 3240895 -142348393 + AluSq SINE Alu 1 297 -16 350 324 19 69 chr10 3241036 3241252 -142348036 + L1ME LINE L1 5264 5468 -2340 275 277 99 45 chr10 3243358 3243560 -142345728 - MER112 DNA MER1_type -6 254 42 1856 160 0 6 chr10 3243659 3243971 -142345317 + AluSx SINE Alu 1 310 -2 38 22 0 0 chr10 3243992 3244037 -142345251 + AT_rich Low_complexity Low_complexity 1 45 0 245 164 0 18 chr10 3244092 3244147 -142345141 + CT-rich Low_complexity Low_complexity 3 56 0 26 0 0 0 chr10 3244152 3244178 -142345110 + AT_rich Low_complexity Low_complexity 1 26 0 243 222 173 49 chr10 3246051 3246132 -142343156 - MIR SINE MIR -48 214 124 2100 103 0 7 chr10 3246134 3246446 -142342842 + AluSx SINE Alu 1 310 0 2142 82 3 7 chr10 3249278 3249569 -142339719 - AluY SINE Alu -21 290 1 924 200 44 9 chr10 3249570 3249795 -142339493 + AluJo SINE Alu 59 291 -21 409 238 153 26 chr10 3249830 3250019 -142339269 + L1ME LINE L1 5573 5785 -336 585 163 65 8 chr10 3250632 3250755 -142338533 + FLAM_C SINE Alu 2 131 -12 320 203 27 0 chr10 3250763 3250837 -142338451 - L1MC2 LINE L1 -4 6340 6265 420 111 0 0 chr10 3251292 3251355 -142337933 + (TG)n Simple_repeat Simple_repeat 1 63 0 819 278 14 0 chr10 3252509 3252732 -142336556 + MLT1B LTR MaLR 8 233 -157 264 263 11 63 chr10 3252836 3252931 -142336357 - MER45A DNA AcHobo -50 128 39 819 207 6 11 chr10 3252957 3253131 -142336157 - AluJb SINE Alu 0 312 140 492 336 77 17 chr10 3253141 3253654 -142335634 + L2 LINE L2 2694 3305 -8 436 316 123 0 chr10 3254939 3254969 -142334319 + MIR SINE MIR 6 31 -231 2188 99 17 3 chr10 3254969 3255271 -142334017 + AluSg SINE Alu 1 306 -4 436 316 123 0 chr10 3255271 3255411 -142333877 + MIR SINE MIR 31 197 -65 281 243 9 75 chr10 3255776 3255883 -142333405 - MIR SINE MIR -55 207 108 279 0 0 0 chr10 3256055 3256086 -142333202 + (TG)n Simple_repeat Simple_repeat 1 31 0 189 0 0 0 chr10 3256497 3256518 -142332770 + (T)n Simple_repeat Simple_repeat 1 21 0 1882 133 0 13 chr10 3258239 3258548 -142330740 + AluSx SINE Alu 1 305 -7 1810 120 31 47 chr10 3259656 3259973 -142329315 - AluSx SINE Alu 0 312 1 698 223 171 0 chr10 3260208 3260401 -142328887 + L1PA16 LINE L1 5930 6155 -11 2086 159 48 17 chr10 3260445 3260860 -142328428 + MSTA LTR MaLR 1 428 0 1588 154 41 20 chr10 3261214 3261324 -142327964 + AluJo SINE Alu 1 107 -205 279 0 0 0 chr10 3261324 3261355 -142327933 + (CAA)n Simple_repeat Simple_repeat 3 33 0 1588 154 41 20 chr10 3261355 3261536 -142327752 + AluJo SINE Alu 107 298 -14 595 245 74 25 chr10 3262065 3262228 -142327060 - MIR SINE MIR -21 241 71 431 358 46 30 chr10 3262879 3263251 -142326037 + L1ME3A LINE L1 5558 5935 -235 2139 97 3 7 chr10 3264692 3264990 -142324298 - AluSx SINE Alu -15 297 1 1739 189 63 5 chr10 3265175 3265617 -142323671 + MLT2B1 LTR ERVL 3 520 0 300 219 183 29 chr10 3265724 3265861 -142323427 - L1MDb LINE L1 -4853 1689 1532 335 269 25 52 chr10 3265879 3265981 -142323307 - L1MDb LINE L1 -5089 1533 1430 2240 91 0 3 chr10 3265981 3266278 -142323010 - AluSc SINE Alu -13 296 1 335 269 25 52 chr10 3266278 3266355 -142322933 - L1MDb LINE L1 -5192 1430 1290 1872 184 26 13 chr10 3266997 3267382 -142321906 - MLT1B LTR MaLR 0 390 1 192 40 0 0 chr10 3267480 3267505 -142321783 + (TG)n Simple_repeat Simple_repeat 2 26 0 228 286 26 0 chr10 3268093 3268170 -142321118 + GA-rich Low_complexity Low_complexity 1 79 0 24 0 0 0 chr10 3269390 3269414 -142319874 + AT_rich Low_complexity Low_complexity 1 24 0 226 316 144 22 chr10 3270179 3270318 -142318970 + L2 LINE L2 3115 3270 -2 270 290 0 0 chr10 3270437 3270499 -142318789 - L2 LINE L2 -3 3310 3249 274 325 34 72 chr10 3270514 3270779 -142318509 - L2 LINE L2 -1407 1907 1653 1545 179 7 39 chr10 3270893 3271201 -142318087 - AluJo SINE Alu -14 298 1 296 364 125 32 chr10 3271417 3272010 -142317278 - L2 LINE L2 -2212 1102 455 377 227 68 0 chr10 3272038 3272126 -142317162 + MLT1A2 LTR MaLR 1 94 -280 1418 231 76 32 chr10 3272131 3272537 -142316751 + MER70A LTR ERVL 13 436 -36 417 202 11 11 chr10 3272775 3272864 -142316424 + MLT1A2 LTR MaLR 80 168 -206 2140 98 3 20 chr10 3272864 3273170 -142316118 + AluSx SINE Alu 1 301 -11 372 211 0 0 chr10 3273211 3273282 -142316006 + MLT1A2 LTR MaLR 285 355 -35 855 322 80 19 chr10 3274671 3275044 -142314244 + L2 LINE L2 2918 3313 0 276 284 102 24 chr10 3275097 3275224 -142314064 - MIR SINE MIR -74 188 52 209 221 34 0 chr10 3276334 3276456 -142312832 + CT-rich Low_complexity Low_complexity 1 126 0 226 301 72 0 chr10 3276547 3276630 -142312658 - Charlie1 DNA MER1_type -317 2444 2356 675 231 18 96 chr10 3276940 3277222 -142312066 + L1MD3 LINE L1 7035 7294 -701 243 224 0 79 chr10 3277236 3277312 -142311976 + MLT1F1 LTR MaLR 34 103 -464 608 231 62 0 chr10 3278693 3278853 -142310435 + L1MD3 LINE L1 7739 7908 -87 1190 101 0 0 chr10 3278882 3279050 -142310238 - AluY SINE Alu -9 302 135 251 167 45 15 chr10 3279051 3279117 -142310171 + L1MD3 LINE L1 7928 7995 0 183 269 185 0 chr10 3279282 3279390 -142309898 + MIR SINE MIR 91 218 -44 27 81 0 0 chr10 3280048 3280110 -142309178 + AT_rich Low_complexity Low_complexity 1 62 0 1549 173 13 26 chr10 3280162 3280468 -142308820 - AluJb SINE Alu -8 304 3 1813 125 7 27 chr10 3280779 3281075 -142308213 + AluSx SINE Alu 1 290 -22 4706 132 53 74 chr10 3282155 3283755 -142305533 - pTR5 LTR ERV1 -9 2429 63 268 313 61 30 chr10 3284834 3284965 -142304323 - Charlie8 DNA MER1_type -2274 143 9 2207 162 37 29 chr10 3284969 3285513 -142303775 + MLT2A2 LTR ERVL 1 554 0 1848 192 48 22 chr10 3285813 3286229 -142303059 + MSTC LTR MaLR 2 428 0 385 311 27 0 chr10 3286278 3286426 -142302862 + MER63A DNA MER1_type 51 202 -8 2296 68 7 7 chr10 3286575 3286884 -142302404 + AluSx SINE Alu 1 309 -3 562 203 101 34 chr10 3286937 3287085 -142302203 + MLT1C LTR MaLR 18 175 -292 1549 170 3 42 chr10 3288611 3288922 -142300366 - AluJb SINE Alu -11 301 3 1092 171 89 20 chr10 3289133 3289379 -142299909 + L1MA5 LINE L1 6038 6300 0 3318 236 75 35 chr10 3289382 3289603 -142299685 - L1MD2 LINE L1 -14 6345 6134 234 0 0 0 chr10 3289603 3289629 -142299659 + (TG)n Simple_repeat Simple_repeat 2 27 0 3318 236 75 35 chr10 3289629 3290738 -142298550 - L1MD2 LINE L1 -225 6134 4975 2335 162 2 2 chr10 3290832 3291240 -142298048 - L1MB3 LINE L1 -9 6174 5767 601 194 0 0 chr10 3291245 3291343 -142297945 + L1MB3 LINE L1 5652 5749 -422 1072 295 50 14 chr10 3291357 3291774 -142297514 - L1MD2 LINE L1 -1234 4912 4481 439 286 9 0 chr10 3291887 3291999 -142297289 - MER63A DNA MER1_type 0 210 98 423 175 35 9 chr10 3292062 3292176 -142297112 + CT-rich Low_complexity Low_complexity 1 117 0 1039 222 63 11 chr10 3292296 3292580 -142296708 + L1MA4 LINE L1 5999 6297 -3 203 387 50 0 chr10 3293710 3293829 -142295459 + L3b LINE CR1 1232 1356 -227 266 286 0 14 chr10 3294034 3294104 -142295184 + L3 LINE CR1 1504 1572 -5 1209 70 41 0 chr10 3295660 3295832 -142293456 - AluY SINE Alu 0 311 133 304 316 15 52 chr10 3296313 3296449 -142292839 - MIR SINE MIR -14 248 118 2962 187 25 33 chr10 3296455 3297098 -142292190 - LTR48B LTR ERV1 -3 641 4 1999 143 0 0 chr10 3297421 3297721 -142291567 - AluSx SINE Alu -12 300 1 208 283 0 33 chr10 3298368 3298428 -142290860 + CT-rich Low_complexity Low_complexity 3 60 0 240 295 85 16 chr10 3299733 3299862 -142289426 + MER45A DNA AcHobo 40 177 -1 190 370 54 0 chr10 3300068 3300160 -142289128 - MIR SINE MIR -123 139 43 1256 171 40 5 chr10 3300671 3300893 -142288395 + MER30 DNA MER1_type 1 230 0 1869 102 0 11 chr10 3301464 3301728 -142287560 - AluSq SINE Alu -52 261 1 349 233 33 0 chr10 3302191 3302281 -142287007 - MER103 DNA DNA -8 158 66 715 274 33 12 chr10 3302285 3302530 -142286758 - Charlie5 DNA MER1_type -28 2584 2335 245 192 0 3 chr10 3302544 3302637 -142286651 - AluY SINE Alu -177 125 1 1418 203 24 100 chr10 3304673 3305092 -142284196 + L1MB3 LINE L1 5364 5750 -421 1085 183 10 0 chr10 3305094 3305302 -142283986 + L1MB3 LINE L1 5973 6182 -1 191 283 50 17 chr10 3305467 3305527 -142283761 - L3 LINE CR1 -478 1099 1038 313 333 7 35 chr10 3305802 3305943 -142283345 - MIR3 SINE MIR -32 176 40 306 0 0 0 chr10 3306477 3306511 -142282777 + (CA)n Simple_repeat Simple_repeat 1 34 0 1349 215 20 27 chr10 3306689 3306987 -142282301 + AluJo SINE Alu 1 296 -6 36 40 0 0 chr10 3307012 3307062 -142282226 + AT_rich Low_complexity Low_complexity 1 50 0 2466 43 3 0 chr10 3307134 3307436 -142281852 + AluY SINE Alu 1 303 -8 1638 204 95 16 chr10 3308127 3308558 -142280730 + MER31B LTR ERV1 2 466 0 258 313 67 33 chr10 3308695 3308845 -142280443 - L2 LINE L2 -923 2391 2237 1799 239 25 15 chr10 3308959 3309431 -142279857 - MER90 LTR ERV1 -68 546 70 2058 115 13 10 chr10 3309598 3309902 -142279386 + AluSq SINE Alu 1 305 -8 21 0 0 0 chr10 3312642 3312663 -142276625 + AT_rich Low_complexity Low_complexity 1 21 0 1919 125 10 7 chr10 3313137 3313432 -142275856 + AluSx SINE Alu 1 296 -16 202 219 0 0 chr10 3313514 3313555 -142275733 - MIR3 SINE MIR -26 182 142 206 255 0 0 chr10 3314776 3314827 -142274461 + (TAAA)n Simple_repeat Simple_repeat 3 53 0 247 292 26 62 chr10 3315361 3315474 -142273814 + MIR SINE MIR 33 141 -67 341 203 123 88 chr10 3315662 3315720 -142273568 - ORSL DNA AcHobo -28 247 193 1859 129 0 0 chr10 3315720 3315983 -142273305 - AluSg SINE Alu -5 305 43 341 203 123 88 chr10 3315983 3316151 -142273137 - ORSL DNA AcHobo -82 193 13 188 283 0 0 chr10 3316190 3316250 -142273038 - L2 LINE L2 -58 3255 3196 3852 194 27 17 chr10 3316926 3317750 -142271538 - L1MB3 LINE L1 -1 6182 5351 2779 97 5 0 chr10 3317845 3318218 -142271070 + THE1C LTR MaLR 1 375 0 223 290 65 32 chr10 3318419 3318512 -142270776 - MIR3 SINE MIR -110 98 3 426 195 18 9 chr10 3319711 3319824 -142269464 + CT-rich Low_complexity Low_complexity 1 114 0 207 100 0 0 chr10 3319843 3319873 -142269415 + (TTCC)n Simple_repeat Simple_repeat 4 33 0 210 369 9 27 chr10 3320473 3320584 -142268704 - MIR3 SINE MIR -93 115 7 2051 136 147 8 chr10 3321171 3321545 -142267743 - MSTA LTR MaLR -2 426 1 1309 214 79 25 chr10 3321819 3322175 -142267113 + MER74A LTR ERVL 151 525 -33 252 0 0 0 chr10 3322426 3322454 -142266834 + (TTTA)n Simple_repeat Simple_repeat 4 31 0 1789 159 3 29 chr10 3322650 3322959 -142266329 - AluJo SINE Alu -11 301 1 2637 106 0 8 chr10 3324207 3324574 -142264714 + THE1B LTR MaLR 1 364 0 3068 171 147 71 chr10 3324576 3325350 -142263938 + THE1B-int LTR MaLR 3 835 -816 1026 116 0 14 chr10 3325350 3325496 -142263792 + THE1B LTR MaLR 221 364 0 1572 205 61 23 chr10 3326905 3327334 -142261954 - Charlie1b DNA MER1_type 0 523 79 2314 99 0 3 chr10 3327595 3327889 -142261399 - AluSq SINE Alu -20 293 1 55 65 0 43 chr10 3330475 3330660 -142258628 + AT_rich Low_complexity Low_complexity 1 177 0 22 0 0 0 chr10 3330699 3330721 -142258567 + AT_rich Low_complexity Low_complexity 1 22 0 1992 124 7 3 chr10 3330819 3331138 -142258150 - AluSx SINE Alu 0 320 1 384 244 23 74 chr10 3332016 3332192 -142257096 + MER5A DNA MER1_type 14 180 -9 539 190 84 39 chr10 3332375 3332554 -142256734 - MER5A DNA MER1_type -2 187 1 2310 112 0 6 chr10 3332982 3333296 -142255992 + AluSq SINE Alu 1 312 -1 21 0 0 0 chr10 3333627 3333648 -142255640 + AT_rich Low_complexity Low_complexity 1 21 0 1327 145 30 98 chr10 3333794 3334131 -142255157 - L1MB8 LINE L1 -4 6174 5861 1276 225 39 0 chr10 3334133 3334440 -142254848 - L1MC3 LINE L1 0 7785 7467 1199 174 9 0 chr10 3334452 3334671 -142254617 - L1MA8 LINE L1 -1 6290 6070 2108 195 49 117 chr10 3334811 3335149 -142254139 - LTR8A LTR ERV1 0 727 464 3241 77 9 2 chr10 3335149 3335577 -142253711 + L1PA7 LINE L1 5722 6152 -2 2108 195 49 117 chr10 3335577 3335976 -142253312 - LTR8A LTR ERV1 -263 464 40 247 289 96 7 chr10 3337134 3337269 -142252019 + MIR3 SINE MIR 44 190 -18 323 183 12 0 chr10 3339137 3339219 -142250069 + CT-rich Low_complexity Low_complexity 2 84 0 299 221 206 29 chr10 3339661 3339797 -142249491 + Ricksha DNA DNA 136 295 -959 * 844 175 0 7 chr10 3339787 3339941 -142249347 + Ricksha DNA DNA 1692 1844 -1402 2915 218 30 21 chr10 3339989 3340649 -142248639 + Ricksha DNA DNA 1819 2484 -762 * 3401 209 56 27 chr10 3340632 3341524 -142247764 + Ricksha DNA DNA 2318 3235 -11 293 109 18 0 chr10 3341580 3341635 -142247653 + (CA)n Simple_repeat Simple_repeat 1 56 0 263 226 75 21 chr10 3341690 3341783 -142247505 + MER45A DNA AcHobo 80 177 -1 261 0 0 0 chr10 3343878 3343907 -142245381 + (T)n Simple_repeat Simple_repeat 1 29 0 2024 128 3 13 chr10 3344466 3344772 -142244516 + AluSx SINE Alu 1 303 -9 1576 192 78 19 chr10 3345087 3345457 -142243831 + MSTD LTR MaLR 1 392 -4 516 156 0 0 chr10 3345503 3345593 -142243695 + GA-rich Low_complexity Low_complexity 3 92 0 583 170 6 33 chr10 3345724 3345906 -142243382 + GA-rich Low_complexity Low_complexity 2 178 0 2280 209 20 8 chr10 3346263 3346757 -142242531 + L1MB8 LINE L1 5505 6004 -174 315 267 72 44 chr10 3346766 3346946 -142242342 - LTR16B LTR ERVL -160 304 120 445 145 0 0 chr10 3347513 3347582 -142241706 - L1PB1 LINE L1 -249 5902 5834 1556 120 8 4 chr10 3347582 3347817 -142241471 + L1PB1 LINE L1 5908 6149 -2 385 223 36 36 chr10 3348253 3348365 -142240923 - MER69 DNA AcHobo -2414 112 1 3279 233 33 20 chr10 3348824 3348949 -142240339 + L1ME1 LINE L1 5158 5280 -886 180 77 0 0 chr10 3348949 3348975 -142240313 + (CA)n Simple_repeat Simple_repeat 2 27 0 3279 233 33 20 chr10 3348975 3349789 -142239499 + L1ME1 LINE L1 5280 6110 -56 2163 114 3 22 chr10 3351041 3351356 -142237932 + AluSg SINE Alu 1 309 -1 615 247 57 98 chr10 3351466 3352009 -142237279 + L1MC5 LINE L1 7391 7911 -50 265 383 8 8 chr10 3352110 3352238 -142237050 + MIR SINE MIR 19 146 -116 1209 238 57 25 chr10 3352662 3353015 -142236273 - MLT1A1 LTR MaLR 0 365 2 342 61 0 0 chr10 3353234 3353283 -142236005 + (CA)n Simple_repeat Simple_repeat 2 50 0 284 369 17 0 chr10 3354903 3355029 -142234259 + MIR SINE MIR 37 162 -65 621 72 0 0 chr10 3355060 3355143 -142234145 + (GGAA)n Simple_repeat Simple_repeat 2 84 0 320 182 55 9 chr10 3355154 3355264 -142234024 + GA-rich Low_complexity Low_complexity 3 117 0 276 30 0 0 chr10 3357065 3357098 -142232190 + (CA)n Simple_repeat Simple_repeat 2 34 0 2883 146 8 22 chr10 3357355 3357854 -142231434 + L1MA8 LINE L1 5629 6120 -171 995 261 35 17 chr10 3358205 3358492 -142230796 - MLT1E LTR MaLR 0 593 302 246 371 59 6 chr10 3359859 3360029 -142229259 - MIR SINE MIR -57 205 27 457 271 66 7 chr10 3360426 3360577 -142228711 + MLT1A2 LTR MaLR 1 160 -214 273 200 93 7 chr10 3360720 3360863 -142228425 + MLT1B LTR MaLR 16 179 -211 395 149 14 0 chr10 3360885 3360959 -142228329 + CT-rich Low_complexity Low_complexity 1 75 0 749 245 7 4 chr10 3360982 3361179 -142228109 + MLT1B LTR MaLR 173 383 -7 423 288 16 8 chr10 3361232 3361357 -142227931 + L2 LINE L2 3141 3266 -6 205 319 26 35 chr10 3361415 3361528 -142227760 - MIR SINE MIR -62 146 35 1954 110 37 0 chr10 3362381 3362684 -142226604 - AluSx SINE Alu 0 313 1 254 281 31 0 chr10 3362857 3362953 -142226335 - MER5A DNA MER1_type -6 183 85 219 204 0 0 chr10 3363208 3363257 -142226031 + (TG)n Simple_repeat Simple_repeat 1 49 0 645 196 0 33 chr10 3363268 3363452 -142225836 + (TG)n Simple_repeat Simple_repeat 2 179 0 2170 100 4 0 chr10 3364523 3364804 -142224484 + AluSq SINE Alu 1 282 -31 210 71 0 0 chr10 3364809 3364837 -142224451 + (GGGGA)n Simple_repeat Simple_repeat 5 32 0 1476 191 32 45 chr10 3365377 3365755 -142223533 - MER93b LTR ERV1 0 373 1 1287 210 34 92 chr10 3367793 3368004 -142221284 - MER57A LTR ERV1 -1 402 225 2133 115 0 0 chr10 3368004 3368308 -142220980 - AluSx SINE Alu -8 304 1 1287 210 34 92 chr10 3368308 3368510 -142220778 - MER57A LTR ERV1 -178 225 13 26 0 0 0 chr10 3368919 3368945 -142220343 + AT_rich Low_complexity Low_complexity 1 26 0 297 287 128 14 chr10 3369013 3369200 -142220088 - MIR SINE MIR -46 216 17 263 233 0 58 chr10 3369743 3369829 -142219459 + LTR29 LTR ERV1 1 81 -541 * 1430 210 98 36 chr10 3369820 3370239 -142219049 + MER39 LTR ERV1 260 704 -3 262 339 64 35 chr10 3370258 3370429 -142218859 - MIR SINE MIR -31 231 56 228 67 0 0 chr10 3372419 3372449 -142216839 + (GGA)n Simple_repeat Simple_repeat 1 30 0 266 280 13 0 chr10 3373343 3373418 -142215870 + (CA)n Simple_repeat Simple_repeat 1 76 0 1306 194 36 12 chr10 3373833 3373986 -142215302 + MLT1A1 LTR MaLR 1 165 -200 2210 85 0 0 chr10 3373986 3374287 -142215001 + AluY SINE Alu 1 301 0 1306 194 36 12 chr10 3374287 3374384 -142214904 + MLT1A1 LTR MaLR 165 258 -107 784 134 0 0 chr10 3374519 3374631 -142214657 + MLT1A1 LTR MaLR 254 365 0 305 315 91 17 chr10 3376490 3376731 -142212557 + LTR16B LTR ERVL 194 452 -12 1800 159 0 3 chr10 3376799 3377095 -142212193 + AluJo SINE Alu 1 295 -17 1950 104 11 0 chr10 3377242 3377563 -142211725 + AluSp SINE Alu 1 313 0 1416 233 29 11 chr10 3377721 3378103 -142211185 + MLT1B LTR MaLR 1 389 -1 1156 246 81 0 chr10 3379049 3379382 -142209906 - MLT1B LTR MaLR -24 366 7 27 73 0 0 chr10 3380739 3380794 -142208494 + AT_rich Low_complexity Low_complexity 1 55 0 270 81 0 0 chr10 3381688 3381725 -142207563 + (T)n Simple_repeat Simple_repeat 1 37 0 309 269 46 9 chr10 3381863 3381971 -142207317 - MER5A DNA MER1_type -77 112 1 204 298 0 0 chr10 3382187 3382244 -142207044 + MIR SINE MIR 20 76 -186 264 112 73 47 chr10 3382497 3382733 -142206555 + (TAGA)n Simple_repeat Simple_repeat 1 242 0 299 322 35 53 chr10 3384251 3384422 -142204866 + MIR SINE MIR 25 192 -70 2155 94 10 0 chr10 3385799 3386098 -142203190 - AluSg SINE Alu -8 302 1 21 0 0 0 chr10 3388543 3388564 -142200724 + AT_rich Low_complexity Low_complexity 1 21 0 246 271 0 17 chr10 3388740 3388799 -142200489 - MIR SINE MIR -88 174 117 1910 167 7 66 chr10 3390778 3391186 -142198102 + MLT1B LTR MaLR 1 384 -6 2154 108 7 7 chr10 3391427 3391732 -142197556 - AluSx SINE Alu -7 305 1 297 292 42 0 chr10 3391743 3391839 -142197449 + LTR67 LTR ERVL 458 557 0 2614 147 36 74 chr10 3391985 3392367 -142196921 + LTR26B LTR ERV1 1 359 -172 1894 123 14 0 chr10 3392367 3392670 -142196618 + AluSx SINE Alu 1 307 0 2614 147 36 74 chr10 3392670 3392836 -142196452 + LTR26B LTR ERV1 359 530 -1 330 316 83 26 chr10 3393732 3393925 -142195363 + MIR SINE MIR 24 227 -35 270 0 0 0 chr10 3395963 3395993 -142193295 + (TC)n Simple_repeat Simple_repeat 1 30 0 207 0 0 0 chr10 3395992 3396015 -142193273 + (CA)n Simple_repeat Simple_repeat 1 23 0 * 234 300 0 25 chr10 3396053 3396133 -142193155 + MIR SINE MIR 166 243 -19 267 103 0 0 chr10 3396141 3396180 -142193108 + (TG)n Simple_repeat Simple_repeat 2 40 0 1907 119 20 0 chr10 3396549 3396842 -142192446 - AluSx SINE Alu -13 299 1 1788 94 11 34 chr10 3397535 3397800 -142191488 - AluSg SINE Alu -16 294 36 3004 198 57 58 chr10 3398340 3399185 -142190103 + L1MB8 LINE L1 5335 6178 0 573 42 0 0 chr10 3400241 3400313 -142188975 + (TC)n Simple_repeat Simple_repeat 1 72 0 1912 179 40 71 chr10 3401054 3401367 -142187921 - MLT1D LTR MaLR -3 502 209 2107 42 4 11 chr10 3401367 3401651 -142187637 - AluY SINE Alu 0 300 19 1912 179 40 71 chr10 3401651 3401854 -142187434 - MLT1D LTR MaLR -296 209 1 274 278 119 61 chr10 3401856 3402133 -142187155 + L1ME4a LINE L1 5501 5801 -320 1674 240 87 23 chr10 3402133 3402662 -142186626 - MLT1F1 LTR MaLR 0 567 5 274 278 119 61 chr10 3402662 3402779 -142186509 + L1ME4a LINE L1 5801 5910 -211 730 266 22 3 chr10 3402982 3403168 -142186120 + MIR SINE MIR 1 190 -18 308 352 72 0 chr10 3403142 3403267 -142186021 - MER5B DNA MER1_type -44 134 1 * 2587 36 0 0 chr10 3403518 3403821 -142185467 + AluYa5 SINE Alu 1 303 -8 371 180 0 90 chr10 3404354 3404443 -142184845 - MIR3 SINE MIR -2 206 126 1276 198 36 71 chr10 3404828 3405136 -142184152 - AluSx SINE Alu -5 297 1 4271 192 23 9 chr10 3405144 3406019 -142183269 - L1MC3 LINE L1 -3 7782 5444 232 69 0 0 chr10 3406553 3406582 -142182706 - MER4B LTR ERV1 0 610 582 4144 107 0 88 chr10 3406588 3407316 -142181972 - MER4A LTR ERV1 0 664 1 253 277 130 48 chr10 3407614 3407816 -142181472 - MIR SINE MIR -11 251 17 29 0 0 0 chr10 3407816 3407845 -142181443 + AT_rich Low_complexity Low_complexity 1 29 0 304 247 88 71 chr10 3409296 3409466 -142179822 - LTR48 LTR ERV1 -2 785 613 515 207 41 130 chr10 3409587 3409833 -142179455 - MER34C LTR ERV1 -321 264 41 2427 80 0 3 chr10 3409922 3410233 -142179055 + AluSx SINE Alu 3 312 0 303 288 120 33 chr10 3410843 3411027 -142178261 - MIR SINE MIR 0 262 63 25 0 0 0 chr10 3411044 3411069 -142178219 + AT_rich Low_complexity Low_complexity 1 25 0 7503 199 15 21 chr10 3411084 3413632 -142175656 - L1MA10 LINE L1 0 6334 3800 230 203 0 17 chr10 3413700 3413759 -142175529 + CT-rich Low_complexity Low_complexity 3 60 0 218 105 26 0 chr10 3415862 3415900 -142173388 + (TTA)n Simple_repeat Simple_repeat 1 39 0 333 308 56 43 chr10 3416483 3416805 -142172483 + MER46C DNA MER2_type 11 336 -2 2281 116 6 0 chr10 3417047 3417358 -142171930 + AluSq SINE Alu 1 313 0 2134 104 27 0 chr10 3417522 3417819 -142171469 - AluSx SINE Alu -2 310 6 21 0 0 0 chr10 3418266 3418287 -142171001 + AT_rich Low_complexity Low_complexity 1 21 0 384 191 0 0 chr10 3419110 3419194 -142170094 + (CA)n Simple_repeat Simple_repeat 1 84 0 208 339 0 33 chr10 3420263 3420443 -142168845 + (CACG)n Simple_repeat Simple_repeat 4 177 0 275 317 0 33 chr10 3420678 3420858 -142168430 + (CACG)n Simple_repeat Simple_repeat 4 177 0 252 176 0 157 chr10 3422284 3422386 -142166902 + LTR46-int LTR ERV1 525 610 -6375 2325 89 0 10 chr10 3422770 3423072 -142166216 + AluY SINE Alu 2 300 -11 1648 173 0 31 chr10 3423073 3423362 -142165926 + AluSx SINE Alu 17 296 -16 803 131 31 8 chr10 3423513 3423643 -142165645 - FLAM_C SINE Alu 0 133 1 1371 283 74 20 chr10 3425289 3425777 -142163511 - LTR40a LTR ERVL 0 519 6 407 300 29 14 chr10 3426415 3426555 -142162733 + MLT1J1 LTR MaLR 64 205 -241 1376 215 101 46 chr10 3427012 3427450 -142161838 - MER31B LTR ERV1 0 466 5 466 216 166 14 chr10 3427765 3427904 -142161384 - MER58B DNA MER1_type -1 340 181 949 240 103 39 chr10 3427954 3428342 -142160946 + LTR37A LTR ERV1 13 425 -1 2381 80 0 46 chr10 3429788 3430114 -142159174 - AluY SINE Alu 0 311 1 270 268 32 16 chr10 3430252 3430375 -142158913 + (TA)n Simple_repeat Simple_repeat 1 125 0 988 75 14 7 chr10 3432398 3432545 -142156743 + (TTTC)n Simple_repeat Simple_repeat 2 149 0 865 215 178 24 chr10 3433418 3433635 -142155653 + MER2 DNA MER2_type 1 278 -66 2082 141 0 0 chr10 3433635 3433933 -142155355 - AluSx SINE Alu -14 298 1 865 215 178 24 chr10 3433933 3434013 -142155275 + MER2 DNA MER2_type 278 344 0 422 207 58 0 chr10 3434328 3434415 -142154873 - MER2 DNA MER2_type -200 145 54 837 38 0 0 chr10 3434419 3434524 -142154764 + (GA)n Simple_repeat Simple_repeat 1 105 0 2171 113 24 0 chr10 3434650 3434943 -142154345 + AluSq SINE Alu 1 300 -13 225 317 52 57 chr10 3437336 3437566 -142151722 - L1MCc LINE L1 -6176 247 19 1875 154 34 0 chr10 3437625 3437747 -142151541 + AluSx SINE Alu 1 117 -195 240 35 0 0 chr10 3437747 3437776 -142151512 + (TAAA)n Simple_repeat Simple_repeat 3 31 0 1875 154 34 0 chr10 3437776 3437946 -142151342 + AluSx SINE Alu 117 303 -9 23 0 0 0 chr10 3437952 3437975 -142151313 + AT_rich Low_complexity Low_complexity 1 23 0 535 168 35 0 chr10 3439236 3439349 -142149939 - MER96B DNA MER1_type? -50 367 251 434 324 50 16 chr10 3439569 3439751 -142149537 + MIR SINE MIR 75 262 0 207 214 0 0 chr10 3439751 3439793 -142149495 + (TTG)n Simple_repeat Simple_repeat 2 43 0 180 252 29 68 chr10 3440661 3440764 -142148524 - L2 LINE L2 -250 3022 2924 212 364 8 8 chr10 3441475 3441593 -142147695 - L2 LINE L2 -1 3312 3195 493 226 36 67 chr10 3442392 3442587 -142146701 + LTR33 LTR ERVL 19 207 -314 257 295 60 34 chr10 3442720 3442869 -142146419 + LTR33 LTR ERVL 367 519 -2 275 264 130 0 chr10 3443949 3444051 -142145237 + MIR SINE MIR 45 157 -62 644 230 11 59 chr10 3444482 3444669 -142144619 + MER5B DNA MER1_type 1 178 0 182 289 121 12 chr10 3445038 3445121 -142144167 + L2 LINE L2 3184 3275 -38 1870 183 21 18 chr10 3445132 3445521 -142143767 - MLT1B LTR MaLR 0 390 1 1649 156 7 40 chr10 3446662 3446963 -142142325 + AluJb SINE Alu 1 291 -21 404 293 0 43 chr10 3446981 3447169 -142142119 + (TATATG)n Simple_repeat Simple_repeat 1 180 0 446 297 11 34 chr10 3447197 3447372 -142141916 + (TATG)n Simple_repeat Simple_repeat 1 171 0 264 77 0 0 chr10 3449911 3449950 -142139338 + (CA)n Simple_repeat Simple_repeat 1 39 0 266 25 0 50 chr10 3449966 3450006 -142139282 + (GAAAA)n Simple_repeat Simple_repeat 3 40 0 1557 205 15 36 chr10 3450673 3451009 -142138279 + MLT1A1 LTR MaLR 4 332 -33 303 290 153 0 chr10 3451299 3451423 -142137865 - MIR SINE MIR -14 248 106 2245 153 33 2 chr10 3451992 3452385 -142136903 - L1M2 LINE L1 -558 5742 5338 3378 141 36 10 chr10 3452385 3452820 -142136468 + L1MA4 LINE L1 5698 6154 -146 2334 116 36 30 chr10 3452820 3453182 -142136106 + THE1B LTR MaLR 1 364 0 3378 141 36 10 chr10 3453182 3453325 -142135963 + L1MA4 LINE L1 6154 6292 -8 731 169 15 0 chr10 3453351 3453487 -142135801 + L1MA4 LINE L1 6163 6300 0 2269 152 93 0 chr10 3454065 3454474 -142134814 + LTR47A LTR ERVL 6 452 0 266 339 0 8 chr10 3454615 3454742 -142134546 + MIR SINE MIR 96 221 -41 2154 158 26 16 chr10 3455190 3455576 -142133712 + L1PA15 LINE L1 5774 6163 -2 247 130 0 0 chr10 3455671 3455717 -142133571 + L1MC4 LINE L1 6658 6703 -1339 207 225 0 0 chr10 3455718 3455758 -142133530 + (TA)n Simple_repeat Simple_repeat 1 40 0 21 0 0 0 chr10 3455978 3455999 -142133289 + AT_rich Low_complexity Low_complexity 1 21 0 270 343 30 35 chr10 3456024 3456225 -142133063 + MIR SINE MIR 15 214 -48 2052 123 3 3 chr10 3458699 3458991 -142130297 - AluSx SINE Alu -20 292 1 22 0 0 0 chr10 3459541 3459563 -142129725 + AT_rich Low_complexity Low_complexity 1 22 0 368 265 0 0 chr10 3460461 3460544 -142128744 - MLT1D LTR MaLR -389 116 34 2987 283 76 50 chr10 3460544 3463107 -142126181 + L1ME3A LINE L1 3346 5990 -180 1676 143 20 61 chr10 3463107 3463432 -142125856 - AluJb SINE Alu 0 313 1 2987 283 76 50 chr10 3463432 3463572 -142125716 + L1ME3A LINE L1 5990 6125 -45 25 0 0 0 chr10 3463701 3463726 -142125562 + AT_rich Low_complexity Low_complexity 1 25 0 2176 119 17 0 chr10 3464868 3465170 -142124118 + AluSq SINE Alu 1 307 -6 28 29 0 0 chr10 3465866 3465901 -142123387 + AT_rich Low_complexity Low_complexity 1 35 0 337 310 150 0 chr10 3467567 3467680 -142121608 + MIR SINE MIR 63 192 -70 2188 90 3 26 chr10 3468078 3468390 -142120898 + AluSp SINE Alu 1 305 -8 479 331 96 11 chr10 3468483 3468661 -142120627 + MIR3 SINE MIR 10 202 -6 2007 107 0 0 chr10 3468920 3469223 -142120065 + AluSx SINE Alu 12 314 0 2170 122 0 0 chr10 3469375 3469679 -142119609 + AluSx SINE Alu 1 304 -8 306 262 192 77 chr10 3470457 3470743 -142118545 - MLT1E1 LTR MaLR -23 631 313 4195 76 53 32 chr10 3471182 3471472 -142117816 + L1PB1 LINE L1 5522 5804 -347 369 0 0 0 chr10 3471472 3471513 -142117775 + (CA)n Simple_repeat Simple_repeat 1 41 0 4195 76 53 32 chr10 3471513 3471839 -142117449 + L1PB1 LINE L1 5804 6151 0 1844 237 59 13 chr10 3471873 3472328 -142116960 + MLT1D LTR MaLR 13 488 -17 3520 218 36 139 chr10 3472348 3473874 -142115414 + MLT1D-int LTR MaLR 3 1371 0 1040 228 25 22 chr10 3473874 3474150 -142115138 + MLT1D LTR MaLR 1 277 -228 1414 171 74 119 chr10 3474157 3474784 -142114504 + LTR49 LTR ERV1 5 565 0 1016 228 50 0 chr10 3474784 3475003 -142114285 + MLT1D LTR MaLR 276 505 0 2267 68 0 42 chr10 3476270 3476577 -142112711 - AluY SINE Alu -13 298 5 486 272 18 0 chr10 3476989 3477103 -142112185 + MIR SINE MIR 97 212 -50 2218 117 39 28 chr10 3477263 3477623 -142111665 + THE1B LTR MaLR 1 364 0 2262 59 28 0 chr10 3479184 3479473 -142109815 - AluY SINE Alu -14 297 1 2315 119 14 6 chr10 3481214 3481566 -142107722 + THE1A LTR MaLR 1 355 0 2032 124 10 3 chr10 3483435 3483741 -142105547 - AluSq SINE Alu -5 308 1 836 308 198 14 chr10 3486301 3486805 -142102483 - L2 LINE L2 -599 2715 2119 22 0 0 0 chr10 3487623 3487645 -142101643 + AT_rich Low_complexity Low_complexity 1 22 0 1823 138 0 43 chr10 3487700 3488005 -142101283 + AluSx SINE Alu 1 292 -20 5618 129 19 2 chr10 3488241 3489453 -142099835 + L1PB3 LINE L1 4926 6154 0 21 71 0 0 chr10 3491193 3491235 -142098053 + AT_rich Low_complexity Low_complexity 1 42 0 2274 82 0 0 chr10 3492225 3492519 -142096769 - AluSg SINE Alu -16 294 1 539 309 29 24 chr10 3494670 3494916 -142094372 - L3 LINE CR1 -190 1387 1141 288 346 26 19 chr10 3495374 3495530 -142093758 + (TATATG)n Simple_repeat Simple_repeat 1 157 0 * 426 354 17 0 chr10 3495467 3495642 -142093646 + (TG)n Simple_repeat Simple_repeat 1 178 0 309 117 81 18 chr10 3496073 3496184 -142093104 + (CTATA)n Simple_repeat Simple_repeat 3 120 0 189 94 0 0 chr10 3497650 3497682 -142091606 + (CCCTAA)n Simple_repeat Simple_repeat 2 33 0 22 0 0 0 chr10 3498629 3498651 -142090637 + AT_rich Low_complexity Low_complexity 1 22 0 489 273 169 7 chr10 3500249 3500403 -142088885 - MIR SINE MIR -45 217 39 407 217 111 40 chr10 3501556 3501739 -142087549 - MIR SINE MIR -17 245 48 213 39 0 0 chr10 3501757 3501783 -142087505 + (CAG)n Simple_repeat Simple_repeat 3 28 0 1061 260 101 9 chr10 3503715 3504061 -142085227 - MLT1B LTR MaLR -12 378 1 376 339 60 50 chr10 3504646 3504997 -142084291 - L1ME4a LINE L1 -269 5852 5493 347 56 19 0 chr10 3504997 3505051 -142084237 + (CA)n Simple_repeat Simple_repeat 2 56 0 376 339 60 50 chr10 3505051 3505183 -142084105 - L1ME4a LINE L1 -628 5493 5364 403 273 53 33 chr10 3505599 3505749 -142083539 - L1ME4a LINE L1 -1111 5035 4883 2075 148 48 31 chr10 3506272 3506630 -142082658 + THE1B LTR MaLR 1 364 0 275 233 17 0 chr10 3506835 3506895 -142082393 + MLT1A1 LTR MaLR 2 62 -366 638 263 80 77 chr10 3506930 3507204 -142082084 + MLT1A1 LTR MaLR 80 354 -11 2274 159 36 31 chr10 3508428 3508976 -142080312 - MLT2A2 LTR ERVL 0 554 1 189 333 23 23 chr10 3508976 3509063 -142080225 - MIR SINE MIR -148 114 28 333 47 0 0 chr10 3509504 3509547 -142079741 + (TTA)n Simple_repeat Simple_repeat 3 45 0 7230 51 1 1 chr10 3509548 3511094 -142078194 - L1PA5 LINE L1 -16 6138 4597 1617 136 19 0 chr10 3513253 3513518 -142075770 - L1MA8 LINE L1 -28 6263 5994 803 99 8 0 chr10 3513768 3513889 -142075399 - AluSg/x SINE Alu -13 299 178 293 237 45 128 chr10 3513912 3514068 -142075220 + MIR SINE MIR 47 189 -73 1961 53 32 0 chr10 3514549 3514796 -142074492 + L1PA7 LINE L1 5900 6154 0 23 0 0 0 chr10 3515080 3515103 -142074185 + AT_rich Low_complexity Low_complexity 1 23 0 21 36 0 0 chr10 3517027 3517055 -142072233 + AT_rich Low_complexity Low_complexity 1 28 0 333 0 0 0 chr10 3517601 3517638 -142071650 + (TTA)n Simple_repeat Simple_repeat 3 39 0 1542 50 0 0 chr10 3517638 3517819 -142071469 - L1PA3 LINE L1 -18 6137 5957 871 177 0 0 chr10 3518336 3518477 -142070811 - AluJb SINE Alu -32 280 140 664 247 67 109 chr10 3518579 3518595 -142070693 - L1MC5 LINE L1 -87 7874 7859 2352 67 3 0 chr10 3518595 3518878 -142070410 - AluSp SINE Alu -29 284 1 664 247 67 109 chr10 3518878 3519427 -142069861 - L1MC5 LINE L1 -102 7859 7333 472 198 108 0 chr10 3519431 3519542 -142069746 + Charlie5 DNA MER1_type 2 124 -2488 1348 197 72 40 chr10 3519542 3519918 -142069370 + Charlie5 DNA MER1_type 2236 2623 0 245 118 0 0 chr10 3520517 3520551 -142068737 + HSMAR1 DNA Mariner 1 34 -1253 789 272 48 97 chr10 3520569 3521136 -142068152 - L1MC5 LINE L1 -812 7149 6611 29 47 0 0 chr10 3521175 3521218 -142068070 + AT_rich Low_complexity Low_complexity 1 43 0 2361 100 0 3 chr10 3521506 3521816 -142067472 - AluSg SINE Alu -1 309 1 225 204 19 48 chr10 3523643 3523746 -142065542 + (TTATA)n Simple_repeat Simple_repeat 4 103 0 4698 36 0 0 chr10 3524334 3524858 -142064430 + L1PA5 LINE L1 5629 6152 -2 398 248 57 0 chr10 3525323 3525464 -142063824 - MER103 DNA DNA -14 152 4 2025 145 0 7 chr10 3525490 3525794 -142063494 - AluSx SINE Alu -10 302 1 265 331 0 8 chr10 3526056 3526183 -142063105 + (TA)n Simple_repeat Simple_repeat 1 126 0 412 270 25 17 chr10 3526398 3526582 -142062706 + L1ME LINE L1 5478 5575 -546 1845 162 3 19 chr10 3526631 3526946 -142062342 - AluSx SINE Alu -2 310 1 265 296 56 38 chr10 3527527 3527726 -142061562 + L1ME LINE L1 5686 5825 -296 200 332 179 11 chr10 3528107 3528297 -142060991 + MIR SINE MIR 27 248 -14 282 29 0 0 chr10 3528450 3528485 -142060803 + (TG)n Simple_repeat Simple_repeat 2 36 0 323 264 90 42 chr10 3528497 3528641 -142060647 - MLT2B2 LTR ERVL -81 434 284 * 614 203 50 51 chr10 3528616 3528818 -142060470 - MLT2B1 LTR ERVL -255 209 1 26 64 0 0 chr10 3528881 3528928 -142060360 + AT_rich Low_complexity Low_complexity 1 47 0 3458 149 10 0 chr10 3528943 3529452 -142059836 + MER75 DNA T2_type 1 514 0 496 251 175 54 chr10 3529553 3529907 -142059381 + MLT1H LTR MaLR 117 513 -36 1663 172 31 0 chr10 3530120 3530411 -142058877 - AluJb SINE Alu -6 306 7 563 273 20 0 chr10 3532188 3532338 -142056950 + MER58B DNA MER1_type 185 337 -4 581 123 123 0 chr10 3533078 3533192 -142056096 + L1MA4 LINE L1 6169 6296 -4 306 319 8 0 chr10 3533358 3533477 -142055811 - MER45A DNA AcHobo 0 178 59 549 264 17 17 chr10 3535045 3535223 -142054065 - MER45A DNA AcHobo 0 178 1 210 308 125 42 chr10 3537525 3537645 -142051643 - MIR SINE MIR -116 146 17 260 276 257 0 chr10 3539322 3539427 -142049861 - L2 LINE L2 -4 3268 3137 2299 99 7 0 chr10 3541389 3541691 -142047597 + AluSq SINE Alu 1 304 -9 183 80 0 0 chr10 3542480 3542505 -142046783 + (GA)n Simple_repeat Simple_repeat 1 25 0 605 101 39 51 chr10 3542507 3542685 -142046603 + (TAGA)n Simple_repeat Simple_repeat 3 178 0 501 117 62 41 chr10 3542719 3543064 -142046224 + (TAGA)n Simple_repeat Simple_repeat 1 352 0 665 90 34 34 chr10 3543123 3543300 -142045988 + (TAGA)n Simple_repeat Simple_repeat 3 179 0 389 230 11 0 chr10 3544429 3544516 -142044772 + MER33 DNA MER1_type 1 88 -236 671 133 97 67 chr10 3544656 3544851 -142044437 + MER33 DNA MER1_type 90 290 -34 234 347 60 7 chr10 3546682 3546832 -142042456 - MARNA DNA Mariner -27 559 402 21 0 0 0 chr10 3548297 3548318 -142040970 + AT_rich Low_complexity Low_complexity 1 21 0 360 355 17 29 chr10 3548725 3548897 -142040391 - MIR3 SINE MIR -6 202 33 2225 111 13 3 chr10 3549477 3549784 -142039504 - AluSx SINE Alu 0 312 3 812 163 8 0 chr10 3551193 3551322 -142037966 + FLAM_C SINE Alu 1 130 -13 474 316 21 21 chr10 3552671 3552864 -142036424 + MIR SINE MIR 70 262 0 22 0 0 0 chr10 3552911 3552933 -142036355 + AT_rich Low_complexity Low_complexity 1 22 0 2321 100 0 0 chr10 3553715 3554014 -142035274 + AluSq SINE Alu 1 299 -14 648 102 0 0 chr10 3554234 3554322 -142034966 - MLT1D LTR MaLR -45 460 373 1319 227 96 67 chr10 3554454 3554935 -142034353 + MLT1D LTR MaLR 3 497 -8 440 296 62 40 chr10 3555157 3555461 -142033827 - L1ME4a LINE L1 -262 5859 5549 21 0 0 0 chr10 3555884 3555905 -142033383 + AT_rich Low_complexity Low_complexity 1 21 0 239 361 83 0 chr10 3555919 3556052 -142033236 + MIR SINE MIR 119 262 0 284 257 0 9 chr10 3557396 3557505 -142031783 + (TG)n Simple_repeat Simple_repeat 1 108 0 450 376 0 0 chr10 3557517 3557695 -142031593 + (TG)n Simple_repeat Simple_repeat 1 178 0 21 71 0 0 chr10 3558883 3558925 -142030363 + AT_rich Low_complexity Low_complexity 1 42 0 181 170 0 85 chr10 3559071 3559118 -142030170 + L2 LINE L2 3230 3272 0 511 318 88 10 chr10 3560199 3560391 -142028897 + MIR SINE MIR 11 217 -45 21 36 0 0 chr10 3560462 3560490 -142028798 + AT_rich Low_complexity Low_complexity 1 28 0 357 293 68 63 chr10 3560863 3561307 -142027981 + L1ME4a LINE L1 5569 6014 -107 2334 78 7 0 chr10 3561603 3562069 -142027219 - AluSx SINE Alu 0 468 1 1845 86 37 19 chr10 3562878 3563146 -142026142 + AluY SINE Alu 39 311 0 207 0 0 0 chr10 3563748 3563771 -142025517 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 566 148 0 0 chr10 3563773 3563854 -142025434 - AluSp/q SINE Alu -21 292 212 367 292 76 70 chr10 3564551 3564866 -142024422 - MER102b DNA MER1_type 0 341 25 1129 210 85 48 chr10 3564944 3565296 -142023992 - MLT1A1 LTR MaLR 0 365 1 338 308 135 39 chr10 3566243 3566502 -142022786 - L2 LINE L2 -1415 1899 1666 3271 75 5 5 chr10 3566502 3566915 -142022373 - L1PA10 LINE L1 0 6168 5756 338 308 135 39 chr10 3566915 3567113 -142022175 - L2 LINE L2 -1648 1666 1398 2359 72 0 3 chr10 3567870 3568162 -142021126 + AluY SINE Alu 21 311 0 224 339 0 0 chr10 3568209 3568271 -142021017 + MIR SINE MIR 58 119 -143 590 222 157 0 chr10 3568720 3568905 -142020383 + L1ME2 LINE L1 4698 4911 -1235 1734 260 95 9 chr10 3568976 3569806 -142019482 + L1ME2 LINE L1 5010 6156 -14 1081 197 0 0 chr10 3570590 3570793 -142018495 + L1PA16 LINE L1 1 203 -6646 * 12353 197 18 19 chr10 3570790 3574886 -142014402 + L1PA16 LINE L1 998 5098 -1771 195 42 0 0 chr10 3574886 3574910 -142014378 + (CA)n Simple_repeat Simple_repeat 1 24 0 12353 197 18 19 chr10 3574910 3576378 -142012910 + L1PA16 LINE L1 5098 6565 -304 313 64 0 0 chr10 3576387 3576434 -142012854 - Alu SINE Alu 0 308 262 1498 164 13 41 chr10 3576434 3576752 -142012536 + L1PA16 LINE L1 6559 6867 -2 30 27 0 0 chr10 3576808 3576845 -142012443 + AT_rich Low_complexity Low_complexity 1 37 0 186 167 0 0 chr10 3576875 3576911 -142012377 + (TA)n Simple_repeat Simple_repeat 2 37 0 583 114 0 11 chr10 3577934 3578022 -142011266 - AluS SINE Alu -224 88 2 783 157 15 66 chr10 3578290 3578488 -142010800 - MER65A LTR ERV1 -2 443 256 27 49 0 0 chr10 3579478 3579519 -142009769 + AT_rich Low_complexity Low_complexity 1 41 0 288 130 0 0 chr10 3580199 3580245 -142009043 + (T)n Simple_repeat Simple_repeat 1 46 0 277 239 138 62 chr10 3581388 3581648 -142007640 + L1ME4a LINE L1 5492 5771 -350 249 260 30 0 chr10 3581912 3582012 -142007276 + L1ME4a LINE L1 6003 6105 -16 29 47 0 0 chr10 3582083 3582126 -142007162 + AT_rich Low_complexity Low_complexity 1 43 0 923 105 0 30 chr10 3582140 3582273 -142007015 - FLAM_C SINE Alu -6 137 9 193 56 28 28 chr10 3583490 3583526 -142005762 + (TTTTTG)n Simple_repeat Simple_repeat 3 38 0 225 291 108 7 chr10 3583554 3583702 -142005586 - MER103 DNA DNA -2 164 2 4134 72 18 0 chr10 3584631 3585186 -142004102 + L1PB1 LINE L1 5583 6147 -4 284 234 85 21 chr10 3585709 3585803 -142003485 - L2 LINE L2 -11 3261 3162 1829 173 21 0 chr10 3585820 3586156 -142003132 + MER7A DNA MER2_type 6 346 0 22 0 0 0 chr10 3587259 3587281 -142002007 + AT_rich Low_complexity Low_complexity 1 22 0 430 223 47 7 chr10 3589921 3590069 -141999219 + MER53 DNA DNA 8 161 -28 1087 206 54 97 chr10 3590341 3590723 -141998565 + MLT1C LTR MaLR 22 390 0 1272 299 103 23 chr10 3590991 3591693 -141997595 + L1ME3A LINE L1 5383 6140 -30 1442 127 0 49 chr10 3591734 3591922 -141997366 - L1PB1 LINE L1 -1 6150 5975 1980 124 64 3 chr10 3591922 3592205 -141997083 - AluSc SINE Alu -9 300 1 1442 127 0 49 chr10 3592205 3592261 -141997027 - L1PB1 LINE L1 -176 5975 5918 401 233 10 19 chr10 3592287 3592390 -141996898 - MLT2D LTR ERVL -230 184 83 852 317 70 19 chr10 3592672 3593619 -141995669 - L1MC4a LINE L1 -831 5315 4948 221 360 107 0 chr10 3594974 3595124 -141994164 - L2 LINE L2 -2050 1264 1099 207 88 0 0 chr10 3595245 3595279 -141994009 + (TC)n Simple_repeat Simple_repeat 2 35 0 302 326 17 76 chr10 3596162 3596334 -141992954 - MER5B DNA MER1_type -15 163 2 29 0 0 0 chr10 3596979 3597008 -141992280 + AT_rich Low_complexity Low_complexity 1 29 0 528 167 10 0 chr10 3597342 3597444 -141991844 - FLAM_A SINE Alu -4 138 36 556 285 52 10 chr10 3597444 3597749 -141991539 + MLT1J LTR MaLR 40 357 -154 1021 103 27 0 chr10 3597766 3597912 -141991376 + BC200 scRNA scRNA 1 150 -50 241 186 57 129 chr10 3597913 3598013 -141991275 + MLT1J LTR MaLR 394 485 -26 3822 76 39 9 chr10 3598013 3598574 -141990714 - L1PA10 LINE L1 0 6168 5606 241 186 57 129 chr10 3598574 3598597 -141990691 + MLT1J LTR MaLR 485 508 -3 2266 69 26 23 chr10 3599660 3599966 -141989322 - AluSq SINE Alu -6 307 1 231 262 12 0 chr10 3600627 3600711 -141988577 - MER53 DNA DNA 0 189 105 461 108 0 48 chr10 3602688 3602771 -141986517 - L1PA10 LINE L1 0 6168 6090 798 19 37 0 chr10 3602771 3602879 -141986409 + L1P LINE L1 5316 5427 -734 450 286 136 15 chr10 3603010 3603216 -141986072 - MIR SINE MIR -18 244 14 199 329 101 25 chr10 3604003 3604161 -141985127 - MIR SINE MIR -9 253 84 2453 68 0 0 chr10 3605499 3605795 -141983493 - AluY SINE Alu -15 296 1 23 54 0 0 chr10 3605958 3605995 -141983293 + AT_rich Low_complexity Low_complexity 1 37 0 460 266 154 0 chr10 3606320 3606508 -141982780 - MLT1L LTR MaLR -8 607 391 219 307 13 13 chr10 3606778 3606853 -141982435 - L2 LINE L2 0 3272 3198 929 178 6 12 chr10 3607777 3607940 -141981348 - FRAM SINE Alu -14 162 1 516 193 106 19 chr10 3607951 3608112 -141981176 + Charlie1b DNA MER1_type 109 283 -240 819 198 11 21 chr10 3610685 3610872 -141978416 - AluJo SINE Alu -13 299 115 2196 229 59 39 chr10 3611352 3611945 -141977343 - MER77 LTR ERV1 0 605 1 362 304 26 41 chr10 3612152 3612346 -141976942 + MLT1K LTR MaLR 154 344 -244 447 86 14 20 chr10 3612463 3612548 -141976740 - MLT1E1 LTR MaLR -512 81 1 257 254 33 90 chr10 3612551 3612673 -141976615 - MIR SINE MIR -67 195 81 1080 224 59 57 chr10 3612984 3613373 -141975915 + MLT1C LTR MaLR 34 423 -44 712 184 6 34 chr10 3613519 3613681 -141975607 - L1ME LINE L1 -547 5574 5421 * 3374 202 89 10 chr10 3613679 3614916 -141974372 - L1MB8 LINE L1 -4 6174 4834 2082 143 0 7 chr10 3615132 3615309 -141973979 - AluSx SINE Alu -6 306 130 189 74 0 0 chr10 3615309 3615336 -141973952 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 2082 143 0 7 chr10 3615336 3615466 -141973822 - AluSx SINE Alu -182 130 1 1007 196 86 8 chr10 3615860 3616105 -141973183 + MLT1C LTR MaLR 1 264 -203 309 254 83 55 chr10 3618272 3618453 -141970835 - MIR SINE MIR -6 256 71 239 160 40 20 chr10 3618601 3618651 -141970637 + MIR SINE MIR 90 140 -122 198 0 0 0 chr10 3618759 3618781 -141970507 + (CAAAA)n Simple_repeat Simple_repeat 1 22 0 2139 118 3 0 chr10 3619163 3619450 -141969838 + AluSx SINE Alu 6 293 -19 1337 224 80 23 chr10 3619662 3620099 -141969189 - MLT1C LTR MaLR 0 467 6 250 300 50 25 chr10 3620214 3620334 -141968954 - MLT1J2 LTR MaLR -45 405 283 1269 213 68 21 chr10 3620465 3620845 -141968443 + L1M4 LINE L1 4901 5298 -848 369 266 199 50 chr10 3620870 3621482 -141967806 + L2 LINE L2 2625 3311 -2 1762 87 101 56 chr10 3621895 3622181 -141967107 - AluSg SINE Alu -9 301 3 2071 144 3 3 chr10 3622713 3623025 -141966263 + AluSx SINE Alu 1 312 0 1140 290 91 22 chr10 3623063 3623614 -141965674 + MLT1E LTR MaLR 5 593 0 350 335 153 0 chr10 3623892 3624062 -141965226 + LTR41 LTR ERVL 342 537 -236 278 253 126 0 chr10 3624170 3624265 -141965023 + L2 LINE L2 2461 2567 -747 308 299 76 28 chr10 3624557 3624670 -141964618 + MIR3 SINE MIR 25 148 -60 2144 115 0 20 chr10 3624670 3624975 -141964313 + AluSx SINE Alu 1 299 -13 308 299 76 28 chr10 3624975 3625005 -141964283 + MIR3 SINE MIR 148 175 -33 236 339 57 16 chr10 3625264 3625388 -141963900 + MIR SINE MIR 24 152 -110 339 153 0 0 chr10 3625730 3625789 -141963499 + AluS SINE Alu 2 60 -248 1731 161 16 20 chr10 3626659 3626963 -141962325 + AluJo SINE Alu 1 303 -9 437 254 8 8 chr10 3627162 3627280 -141962008 + L2 LINE L2 3193 3310 -3 363 23 0 0 chr10 3678500 3678544 -141910744 + (TG)n Simple_repeat Simple_repeat 1 44 0 1550 99 5 0 chr10 3679218 3679431 -141909857 - AluSq SINE Alu -18 295 82 282 324 50 22 chr10 3679431 3679562 -141909726 - MIR SINE MIR -76 186 49 207 200 24 47 chr10 3680017 3680102 -141909186 + (CCCG)n Simple_repeat Simple_repeat 2 84 0 248 310 80 0 chr10 3680586 3680699 -141908589 - MIR SINE MIR -55 207 86 23 0 0 0 chr10 3680997 3681020 -141908268 + AT_rich Low_complexity Low_complexity 1 23 0 705 133 0 17 chr10 3681086 3681206 -141908082 - L1PA13 LINE L1 -1 6162 6045 206 261 138 0 chr10 3681708 3681773 -141907515 + MIR SINE MIR 189 262 0 425 155 0 39 chr10 3681820 3681923 -141907365 - L1PA2 LINE L1 0 6155 6057 56 86 0 0 chr10 3681972 3682112 -141907176 + GC_rich Low_complexity Low_complexity 1 140 0 504 189 0 0 chr10 3682271 3682414 -141906874 + (CA)n Simple_repeat Simple_repeat 1 143 0 314 80 20 0 chr10 3682528 3682578 -141906710 + MADE1 DNA Mariner 30 80 0 183 80 0 0 chr10 3683965 3683990 -141905298 + (A)n Simple_repeat Simple_repeat 1 25 0 231 280 23 76 chr10 3684185 3684317 -141904971 + L2 LINE L2 3189 3313 0 * 426 333 77 16 chr10 3684311 3684494 -141904794 - MIR SINE MIR -18 244 51 324 264 66 16 chr10 3685563 3685684 -141903604 - MIR SINE MIR -29 233 107 201 39 0 0 chr10 3687048 3687074 -141902214 + (TTCA)n Simple_repeat Simple_repeat 3 28 0 1648 123 19 112 chr10 3687119 3687493 -141901795 + MER44D DNA MER2_type 1 609 0 517 192 24 6 chr10 3687753 3688097 -141901191 + (TG)n Simple_repeat Simple_repeat 1 350 0 181 371 171 12 chr10 3688556 3688726 -141900562 - MIR SINE MIR -20 242 46 941 151 0 17 chr10 3689841 3690013 -141899275 - L1MA5A LINE L1 -7 6290 6122 391 323 65 26 chr10 3692252 3692484 -141896804 - L2 LINE L2 0 3313 3073 291 295 213 22 chr10 3692519 3692885 -141896403 - L2 LINE L2 -342 2972 2537 209 373 18 9 chr10 3693269 3693379 -141895909 - MIR SINE MIR -127 135 25 275 265 0 10 chr10 3693489 3693587 -141895701 + (TATG)n Simple_repeat Simple_repeat 2 98 0 26 0 0 0 chr10 3693617 3693643 -141895645 + AT_rich Low_complexity Low_complexity 1 26 0 1645 175 0 4 chr10 3693998 3694278 -141895010 + AluJb SINE Alu 1 279 -33 230 200 40 0 chr10 3694288 3694338 -141894950 - MLT1A1 LTR MaLR -313 52 1 1970 25 0 4 chr10 3696490 3696731 -141892557 - L1P LINE L1 -779 5367 5128 1222 14 0 0 chr10 3696731 3696876 -141892412 + L1P LINE L1 4981 5125 -1021 22 0 0 0 chr10 3697109 3697131 -141892157 + AT_rich Low_complexity Low_complexity 1 22 0 402 277 42 0 chr10 3697677 3697796 -141891492 + L1MC4 LINE L1 6580 6703 -1339 351 213 32 75 chr10 3697788 3697882 -141891406 + L1MC4 LINE L1 6614 6703 -1339 * 464 313 13 13 chr10 3698510 3698660 -141890628 + MIR SINE MIR 2 151 -111 399 154 0 154 chr10 3698667 3698771 -141890517 - MER1B DNA MER1_type 0 339 252 246 149 15 119 chr10 3698823 3698890 -141890398 - MER1B DNA MER1_type -63 276 217 561 314 49 14 chr10 3699027 3699250 -141890038 + HERVL LTR ERVL 3321 3551 -2213 1042 307 172 29 chr10 3699337 3700252 -141889036 + HERVL LTR ERVL 3621 4671 -852 344 291 208 21 chr10 3700886 3701127 -141888161 + LTR33 LTR ERVL 3 288 -233 1563 133 8 0 chr10 3702938 3703179 -141886109 - AluSx SINE Alu -15 297 55 798 207 101 30 chr10 3704032 3704465 -141884823 - MLT1D LTR MaLR 0 505 1 241 290 168 23 chr10 3704637 3704768 -141884520 - MIR SINE MIR -40 222 73 289 304 18 36 chr10 3704813 3704925 -141884363 - MIR SINE MIR -88 174 65 234 273 0 0 chr10 3705627 3705682 -141883606 - HAL1 LINE L1 -811 1696 1642 242 339 0 0 chr10 3706343 3706408 -141882880 + L2 LINE L2 3249 3313 0 427 296 71 12 chr10 3706851 3707091 -141882197 - HAL1 LINE L1 -744 1763 1510 651 278 116 4 chr10 3708459 3708700 -141880588 - L2 LINE L2 -24 3289 3022 5075 172 22 27 chr10 3708713 3709724 -141879564 - L1MA5A LINE L1 -1209 4937 3932 4670 151 46 15 chr10 3709717 3710858 -141878430 + L1MA5A LINE L1 4939 6102 -195 * 850 64 0 0 chr10 3711594 3711703 -141877585 - L1P LINE L1 -5129 1017 909 3670 47 0 24 chr10 3711703 3712203 -141877085 + L1PA4 LINE L1 5686 6174 0 230 0 33 0 chr10 3716233 3716263 -141873025 + (TTTA)n Simple_repeat Simple_repeat 3 33 0 1803 114 78 0 chr10 3716304 3716575 -141872713 + AluSg SINE Alu 1 292 -18 455 228 44 0 chr10 3718185 3718299 -141870989 + MIR SINE MIR 26 144 -118 233 192 60 50 chr10 3718424 3718595 -141870693 - MLT1B LTR MaLR -68 522 336 * 1549 232 16 16 chr10 3718593 3718960 -141870328 + MLT1B LTR MaLR 8 374 -16 339 182 15 0 chr10 3719389 3719455 -141869833 - L1MA7 LINE L1 -428 5863 5797 354 284 52 74 chr10 3719881 3720110 -141869178 - L2 LINE L2 -2 3311 3088 1964 140 3 3 chr10 3720151 3720459 -141868829 - AluSx SINE Alu -4 308 1 402 291 35 70 chr10 3721102 3721189 -141868099 + L3 LINE CR1 1144 1224 -353 1934 140 0 3 chr10 3721189 3721481 -141867807 + AluSc SINE Alu 1 291 -18 402 291 35 70 chr10 3721481 3721565 -141867723 + L3 LINE CR1 1224 1309 -268 215 329 25 95 chr10 3722404 3722562 -141866726 - MIR SINE MIR -6 202 56 1163 225 49 70 chr10 3722707 3723093 -141866195 - MLT1B LTR MaLR -10 380 3 318 258 68 53 chr10 3723233 3723365 -141865923 - MIR SINE MIR -107 155 22 200 150 0 50 chr10 3725381 3725421 -141863867 + L2 LINE L2 3223 3260 -12 217 316 32 21 chr10 3727983 3728078 -141861210 - MER5A DNA MER1_type 0 189 94 215 229 21 0 chr10 3728182 3728230 -141861058 + CT-rich Low_complexity Low_complexity 4 52 0 311 277 21 7 chr10 3728363 3728484 -141860804 - MIR SINE MIR -74 134 15 226 189 0 0 chr10 3729269 3729306 -141859982 - LTR33 LTR ERVL 0 521 485 261 270 34 34 chr10 3729505 3729594 -141859694 - MERVL LTR ERVL -2286 3199 3111 1947 304 58 16 chr10 3729950 3730740 -141858548 - MERVL LTR ERVL -3048 2716 1894 223 329 12 75 chr10 3730803 3730964 -141858324 - L2 LINE L2 -888 2426 2276 1138 133 0 0 chr10 3731074 3731232 -141858056 + AluSc SINE Alu 135 292 -17 586 330 14 0 chr10 3731294 3731503 -141857785 - L2 LINE L2 -1259 2055 1844 285 51 0 0 chr10 3732601 3732640 -141856648 + (TG)n Simple_repeat Simple_repeat 2 40 0 332 128 0 0 chr10 3732915 3732962 -141856326 + AluJ/FLAM SINE Alu 14 60 -242 674 179 0 16 chr10 3732962 3733085 -141856203 - AluJo SINE Alu -122 190 70 252 0 0 0 chr10 3733107 3733135 -141856153 + (A)n Simple_repeat Simple_repeat 1 28 0 189 0 0 0 chr10 3733135 3733156 -141856132 + (GA)n Simple_repeat Simple_repeat 2 22 0 987 201 22 35 chr10 3733604 3733833 -141855455 + AluJo SINE Alu 71 296 -16 189 0 0 0 chr10 3735216 3735237 -141854051 + (TC)n Simple_repeat Simple_repeat 2 22 0 1725 176 7 21 chr10 3735252 3735542 -141853746 - AluJo SINE Alu -25 287 2 192 40 0 0 chr10 3735853 3735878 -141853410 + (A)n Simple_repeat Simple_repeat 1 25 0 281 262 36 12 chr10 3737501 3737585 -141851703 + MER103 DNA DNA 57 142 -24 2998 101 10 2 chr10 3737693 3738109 -141851179 + L1PB1 LINE L1 5720 6138 -13 194 0 39 0 chr10 3738112 3738138 -141851150 + (TAAA)n Simple_repeat Simple_repeat 3 29 0 292 176 14 14 chr10 3738153 3738227 -141851061 + (CATATA)n Simple_repeat Simple_repeat 2 75 0 2720 30 0 0 chr10 3739621 3739922 -141849366 - AluY SINE Alu -10 301 1 225 154 0 0 chr10 3740990 3741029 -141848259 + CT-rich Low_complexity Low_complexity 2 40 0 21 0 0 0 chr10 3741676 3741697 -141847591 + GC_rich Low_complexity Low_complexity 1 21 0 516 252 35 0 chr10 3741697 3741840 -141847448 + MER5A DNA MER1_type 42 189 0 181 219 0 0 chr10 3741921 3741962 -141847326 + MER5B DNA MER1_type 5 45 -133 270 0 0 0 chr10 3742144 3742174 -141847114 + (TG)n Simple_repeat Simple_repeat 1 30 0 627 291 110 68 chr10 3742678 3743225 -141846063 + MLT1K LTR MaLR 14 583 -5 2159 112 7 3 chr10 3743603 3743897 -141845391 + AluSx SINE Alu 1 295 -17 2375 76 0 0 chr10 3744624 3744914 -141844374 - AluSc SINE Alu -19 290 1 218 256 11 67 chr10 3745654 3745703 -141843585 + L2 LINE L2 3184 3227 -45 3988 137 9 16 chr10 3745703 3745822 -141843466 - MER41B LTR ERV1 -2 633 515 2163 115 26 10 chr10 3745822 3746127 -141843161 + AluSq SINE Alu 1 310 -3 3988 137 9 16 chr10 3746127 3746644 -141842644 - MER41B LTR ERV1 -120 515 1 218 256 11 67 chr10 3746644 3746684 -141842604 + L2 LINE L2 3227 3268 -4 940 244 110 60 chr10 3746762 3747298 -141841990 + HAL1 LINE L1 1427 1989 -518 221 313 52 26 chr10 3747299 3747414 -141841874 + L2 LINE L2 3151 3268 -4 589 282 74 29 chr10 3747570 3747921 -141841367 + HAL1 LINE L1 2120 2486 -21 2246 207 76 8 chr10 3748013 3748524 -141840764 + MER44D DNA MER2_type 1 601 -4 273 285 179 20 chr10 3749750 3749901 -141839387 + MIR3 SINE MIR 8 182 -26 249 162 73 0 chr10 3751931 3751999 -141837289 + MIR SINE MIR 73 145 -117 725 296 73 54 chr10 3752325 3752951 -141836337 + L1MEc LINE L1 1593 2230 -4166 901 266 94 16 chr10 3752992 3753428 -141835860 + L1MEc LINE L1 2272 2741 -3474 306 243 110 143 chr10 3753444 3753745 -141835543 + L1MEc LINE L1 3051 3341 -2874 2472 195 133 16 chr10 3755313 3755943 -141833345 + MER39 LTR ERV1 4 707 0 23 33 0 0 chr10 3758358 3758388 -141830900 + AT_rich Low_complexity Low_complexity 1 30 0 2604 58 0 0 chr10 3758464 3758775 -141830513 - AluY SINE Alu 0 311 1 202 295 13 13 chr10 3760117 3760195 -141829093 - MIR SINE MIR -17 245 168 212 317 46 63 chr10 3760295 3760579 -141828709 + L2 LINE L2 2212 2490 -824 195 42 0 0 chr10 3760579 3760603 -141828685 + (TCCC)n Simple_repeat Simple_repeat 3 26 0 200 349 0 0 chr10 3762270 3762333 -141826955 + (CACG)n Simple_repeat Simple_repeat 2 64 0 2261 111 0 16 chr10 3762751 3763066 -141826222 + AluSx SINE Alu 1 310 -2 2255 65 0 7 chr10 3764190 3764465 -141824823 - AluY SINE Alu 0 311 39 683 317 74 54 chr10 3765135 3765306 -141823982 - L1ME LINE L1 -5066 1004 838 2254 115 0 0 chr10 3765306 3765602 -141823686 - AluSx SINE Alu -16 296 1 683 317 74 54 chr10 3765602 3766394 -141822894 - L1ME LINE L1 -5232 838 22 255 236 67 118 chr10 3766586 3766883 -141822405 - L1M4 LINE L1 -907 5239 4958 392 304 35 47 chr10 3767270 3767441 -141821847 + MIR SINE MIR 24 192 -70 2253 110 3 3 chr10 3767445 3767755 -141821533 + AluSx SINE Alu 3 312 0 499 276 7 73 chr10 3768263 3768538 -141820750 - L2 LINE L2 0 3313 3057 1916 142 48 0 chr10 3769914 3770209 -141819079 + AluSx SINE Alu 1 309 -3 2336 106 48 31 chr10 3770532 3770890 -141818398 + THE1B LTR MaLR 1 364 0 26 0 0 0 chr10 3771594 3771620 -141817668 + AT_rich Low_complexity Low_complexity 1 26 0 2198 117 0 0 chr10 3771889 3772179 -141817109 - AluSx SINE Alu -1 311 22 592 133 0 0 chr10 3772179 3772262 -141817026 - AluS SINE Alu -228 84 2 298 311 45 8 chr10 3772628 3772760 -141816528 - MIR SINE MIR -3 259 123 272 296 178 0 chr10 3773060 3773229 -141816059 + MLT1G1 LTR MaLR 358 556 -39 405 0 0 0 chr10 3774610 3774655 -141814633 + (CA)n Simple_repeat Simple_repeat 1 45 0 995 188 117 78 chr10 3774869 3775178 -141814110 - MLT1A1 LTR MaLR -32 333 13 378 352 58 19 chr10 3775515 3775588 -141813700 + L1ME LINE L1 5312 5381 -740 249 33 0 0 chr10 3775588 3775618 -141813670 + (TA)n Simple_repeat Simple_repeat 2 31 0 378 352 58 19 chr10 3775618 3775922 -141813366 + L1ME LINE L1 5381 5704 -417 1222 146 34 0 chr10 3776011 3776217 -141813071 + Tigger2 DNA MER2_type 1 213 -2505 886 172 0 49 chr10 3776214 3776312 -141812976 + Tigger2 DNA MER2_type 2554 2642 -66 * 1991 116 103 3 chr10 3776312 3776632 -141812656 - THE1A LTR MaLR 0 355 4 886 172 0 49 chr10 3776632 3776696 -141812592 + Tigger2 DNA MER2_type 2642 2708 0 24 0 0 0 chr10 3776763 3776787 -141812501 + AT_rich Low_complexity Low_complexity 1 24 0 391 250 96 13 chr10 3777144 3777300 -141811988 + L1ME LINE L1 5500 5668 -453 612 150 2 74 chr10 3777578 3777749 -141811539 - Charlie3 DNA MER1_type -65 2645 159 264 282 24 0 chr10 3778376 3778460 -141810828 - MIR SINE MIR -62 146 59 21 82 0 0 chr10 3779948 3779997 -141809291 + AT_rich Low_complexity Low_complexity 1 49 0 201 121 0 0 chr10 3780165 3780198 -141809090 + (T)n Simple_repeat Simple_repeat 1 33 0 228 176 27 14 chr10 3780980 3781054 -141808234 + (TA)n Simple_repeat Simple_repeat 2 76 0 246 164 0 0 chr10 3782257 3782312 -141806976 + T-rich Low_complexity Low_complexity 1 55 0 224 322 158 33 chr10 3784109 3784261 -141805027 + MIR3 SINE MIR 30 200 -8 241 174 14 29 chr10 3787792 3787861 -141801427 + A-rich Low_complexity Low_complexity 1 68 0 24 0 0 0 chr10 3788110 3788134 -141801154 + GC_rich Low_complexity Low_complexity 1 24 0 214 160 0 107 chr10 3789046 3789121 -141800167 + C-rich Low_complexity Low_complexity 5 71 0 244 280 42 59 chr10 3790859 3790977 -141798311 - MIR3 SINE MIR -38 170 55 21 0 0 0 chr10 3791372 3791393 -141797895 + AT_rich Low_complexity Low_complexity 1 21 0 1894 128 7 0 chr10 3791731 3792020 -141797268 - AluSx SINE Alu -21 291 1 574 284 100 8 chr10 3792418 3792679 -141796609 + L1ME2 LINE L1 4546 4830 -1316 1369 268 52 32 chr10 3792734 3793405 -141795883 - L1MCc LINE L1 -4888 1535 1217 945 262 0 9 chr10 3793405 3793630 -141795658 - MER58A DNA MER1_type -1 223 1 1369 268 52 32 chr10 3793630 3793839 -141795449 - L1MCc LINE L1 -5206 1217 1014 387 239 44 97 chr10 3793905 3794131 -141795157 - L1MCc LINE L1 -5541 882 669 533 254 178 9 chr10 3794159 3794372 -141794916 - L1MCc LINE L1 -5970 453 205 465 211 28 49 chr10 3794384 3794526 -141794762 - L1MCc LINE L1 -6259 164 26 299 183 33 0 chr10 3794526 3794586 -141794702 + L1ME2 LINE L1 4868 4929 -1217 241 213 0 53 chr10 3794620 3794695 -141794593 + A-rich Low_complexity Low_complexity 1 71 0 341 159 0 14 chr10 3794695 3794764 -141794524 + GA-rich Low_complexity Low_complexity 1 68 0 2216 261 91 27 chr10 3794771 3795887 -141793401 + L1ME2 LINE L1 4960 6152 -12 209 220 17 0 chr10 3796050 3796109 -141793179 + (TGGA)n Simple_repeat Simple_repeat 2 61 0 346 253 13 114 chr10 3796246 3796404 -141792884 + MIR SINE MIR 21 162 -100 201 240 91 66 chr10 3796420 3796541 -141792747 - MIR SINE MIR -36 226 103 2074 112 0 0 chr10 3797309 3797624 -141791664 + AluSx SINE Alu 1 315 0 183 156 0 0 chr10 3798985 3799017 -141790271 + (CACG)n Simple_repeat Simple_repeat 1 32 0 188 67 33 0 chr10 3799505 3799535 -141789753 + (TA)n Simple_repeat Simple_repeat 2 32 0 1730 130 72 4 chr10 3800493 3800769 -141788519 - AluSx SINE Alu -17 295 1 651 240 41 77 chr10 3801256 3801477 -141787811 + MER20 DNA MER1_type 1 213 -6 1581 205 73 6 chr10 3801501 3801843 -141787445 + MLT1A1 LTR MaLR 1 365 0 1616 135 15 0 chr10 3801923 3802182 -141787106 + AluSx SINE Alu 47 309 -3 24 32 0 0 chr10 3802188 3802219 -141787069 + AT_rich Low_complexity Low_complexity 1 31 0 356 327 145 0 chr10 3802428 3802587 -141786701 + MIR SINE MIR 81 262 0 190 269 58 0 chr10 3803114 3803166 -141786122 + L3 LINE CR1 1392 1446 -131 527 189 8 0 chr10 3804475 3804602 -141784686 + CT-rich Low_complexity Low_complexity 2 129 0 1979 121 0 0 chr10 3806855 3807158 -141782130 + AluSx SINE Alu 1 303 0 545 278 168 0 chr10 3807233 3807424 -141781864 - MIR SINE MIR 0 262 40 439 229 18 28 chr10 3807444 3807728 -141781560 + GA-rich Low_complexity Low_complexity 1 280 0 439 149 11 11 chr10 3808827 3808921 -141780367 + CT-rich Low_complexity Low_complexity 3 96 0 180 0 0 0 chr10 3809833 3809853 -141779435 + (TAAA)n Simple_repeat Simple_repeat 2 21 0 238 263 75 25 chr10 3812114 3812194 -141777094 + MIR3 SINE MIR 10 93 -115 290 286 12 0 chr10 3813596 3813680 -141775608 + (CA)n Simple_repeat Simple_repeat 1 85 0 231 36 0 0 chr10 3814196 3814224 -141775064 + (CA)n Simple_repeat Simple_repeat 2 29 0 25 0 0 0 chr10 3814394 3814419 -141774869 + AT_rich Low_complexity Low_complexity 1 25 0 23 0 0 0 chr10 3814456 3814479 -141774809 + AT_rich Low_complexity Low_complexity 1 23 0 359 21 21 0 chr10 3815784 3815832 -141773456 + (GA)n Simple_repeat Simple_repeat 2 50 0 264 191 0 0 chr10 3816453 3816500 -141772788 - MER39 LTR ERV1 -268 439 393 230 143 29 100 chr10 3816548 3816618 -141772670 - MER34 LTR ERV1 -411 131 67 231 273 52 44 chr10 3817131 3817228 -141772060 - BSR/Beta Satellite Satellite 0 282 187 248 214 205 9 chr10 3817228 3817340 -141771948 - MER101 LTR ERV1 -223 251 118 231 273 52 44 chr10 3817340 3817411 -141771877 - BSR/Beta Satellite Satellite -95 187 1 241 121 121 0 chr10 3817550 3817616 -141771672 + (TATAA)n Simple_repeat Simple_repeat 4 77 0 469 96 48 0 chr10 3818188 3818271 -141771017 + T-rich Low_complexity Low_complexity 3 89 0 2005 137 16 0 chr10 3818276 3818582 -141770706 - AluSq SINE Alu 0 313 3 2061 113 3 0 chr10 3818584 3818876 -141770412 - AluSx SINE Alu -13 299 7 1943 126 0 19 chr10 3818909 3819227 -141770061 - AluSx SINE Alu 0 312 1 237 159 0 0 chr10 3819915 3819959 -141769329 + (CA)n Simple_repeat Simple_repeat 1 44 0 201 154 0 0 chr10 3819959 3819998 -141769290 + (TG)n Simple_repeat Simple_repeat 2 40 0 639 334 155 7 chr10 3820155 3821143 -141768145 - L2 LINE L2 -5 3308 2103 356 329 6 32 chr10 3822489 3822647 -141766641 + MER63A DNA MER1_type 36 189 -21 217 362 105 51 chr10 3823063 3823320 -141765968 - L3b LINE CR1 -9 1574 1304 194 261 29 14 chr10 3824057 3824126 -141765162 - MIR SINE MIR -10 252 183 475 135 73 21 chr10 3824343 3824439 -141764849 + MER4A LTR ERV1 1 101 -563 * 1884 123 6 25 chr10 3824438 3824788 -141764500 + MER4A LTR ERV1 263 664 0 1997 108 22 0 chr10 3824979 3825280 -141764008 + AluSq SINE Alu 1 307 0 470 311 89 38 chr10 3825292 3825684 -141763604 - L2 LINE L2 -422 2892 2481 553 263 45 58 chr10 3825772 3825996 -141763292 + MLT1E LTR MaLR 27 247 -346 3578 148 45 54 chr10 3825996 3826573 -141762715 + L1MA8 LINE L1 5560 6130 -161 2336 139 55 0 chr10 3826573 3826955 -141762333 - MER57A LTR ERV1 0 403 1 3578 148 45 54 chr10 3826955 3827115 -141762173 + L1MA8 LINE L1 6130 6290 -1 245 244 0 39 chr10 3827115 3827185 -141762103 + MLT1E LTR MaLR 521 589 -4 809 291 128 5 chr10 3827191 3827580 -141761708 - L2 LINE L2 -940 2374 1938 345 123 12 37 chr10 3827691 3827772 -141761516 + (TTCTC)n Simple_repeat Simple_repeat 3 81 0 * 635 94 10 0 chr10 3827758 3827854 -141761434 + (TTCC)n Simple_repeat Simple_repeat 3 99 0 1494 193 43 3 chr10 3827867 3828167 -141761121 - AluJb SINE Alu 0 312 1 2001 114 0 35 chr10 3828528 3828845 -141760443 - AluY SINE Alu -5 306 1 1555 206 96 54 chr10 3828870 3829056 -141760232 + MLT2B2 LTR ERVL 3 180 -335 4565 125 25 10 chr10 3829056 3829737 -141759551 - LTR8 LTR ERV1 0 691 1 1555 206 96 54 chr10 3829737 3829977 -141759311 + MLT2B2 LTR ERVL 180 447 -68 186 43 0 0 chr10 3829980 3830003 -141759285 + (CATATA)n Simple_repeat Simple_repeat 5 27 0 215 170 0 19 chr10 3830003 3830056 -141759232 + (TG)n Simple_repeat Simple_repeat 2 53 0 391 351 83 12 chr10 3830100 3830268 -141759020 - HAL1 LINE L1 -1100 1407 1228 291 157 0 0 chr10 3830377 3830428 -141758860 + (CA)n Simple_repeat Simple_repeat 2 52 0 300 284 0 53 chr10 3830428 3830523 -141758765 + L1MC4 LINE L1 6610 6699 -1343 288 308 93 0 chr10 3830524 3830631 -141758657 + L2 LINE L2 3156 3272 0 22 0 0 0 chr10 3830677 3830699 -141758589 + AT_rich Low_complexity Low_complexity 1 22 0 609 293 96 76 chr10 3830978 3831177 -141758111 - HAL1 LINE L1 -900 1607 1413 1930 80 30 36 chr10 3831177 3831349 -141757939 - AluY SINE Alu -9 302 131 221 0 0 33 chr10 3831349 3831379 -141757909 + (TTTTG)n Simple_repeat Simple_repeat 2 30 0 1930 80 30 36 chr10 3831379 3831508 -141757780 - AluY SINE Alu -180 131 3 609 293 96 76 chr10 3831508 3831755 -141757533 - HAL1 LINE L1 -1094 1413 1152 735 228 7 0 chr10 3832132 3832281 -141757007 + FRAM SINE Alu 9 158 -18 1955 112 0 4 chr10 3832289 3832603 -141756685 + AluSx SINE Alu 9 321 0 25 31 0 0 chr10 3832646 3832678 -141756610 + AT_rich Low_complexity Low_complexity 1 32 0 1206 99 0 6 chr10 3833747 3833918 -141755370 - AluSg/x SINE Alu -18 294 125 195 316 128 17 chr10 3833987 3834104 -141755184 + MIR SINE MIR 17 146 -62 216 0 0 0 chr10 3835870 3835894 -141753394 + (A)n Simple_repeat Simple_repeat 1 24 0 1143 176 118 123 chr10 3885955 3886371 -141702917 - MLT2D LTR ERVL 0 414 1 23 0 0 0 chr10 3886408 3886431 -141702857 + AT_rich Low_complexity Low_complexity 1 23 0 2168 142 0 0 chr10 3886603 3886906 -141702382 + AluSx SINE Alu 1 303 -9 212 261 15 15 chr10 3887004 3887069 -141702219 - MIR SINE MIR -107 101 37 372 274 122 16 chr10 3887527 3887848 -141701440 - L1ME4a LINE L1 -3 6118 5764 759 191 89 93 chr10 3887911 3888233 -141701055 + MLT1A2 LTR MaLR 6 300 -74 618 264 22 0 chr10 3888387 3888565 -141700723 - MER45 DNA AcHobo -856 184 3 1141 132 11 0 chr10 3890912 3891086 -141698202 - AluSq SINE Alu -4 309 134 2104 143 0 0 chr10 3891086 3891387 -141697901 - AluSp SINE Alu -12 301 1 395 305 32 13 chr10 3891943 3892097 -141697191 + MIR SINE MIR 21 177 -85 199 309 178 13 chr10 3892618 3892770 -141696518 - MER5A DNA MER1_type 0 189 13 2082 135 7 0 chr10 3892920 3893223 -141696065 - AluSx SINE Alu -7 305 1 300 277 84 34 chr10 3894182 3894301 -141694987 + MIR SINE MIR 137 261 -1 2288 115 0 3 chr10 3894636 3895004 -141694284 + AluSx SINE Alu 3 369 0 639 254 0 7 chr10 3895084 3895226 -141694062 - MER8 DNA MER2_type 0 239 99 332 325 37 47 chr10 3895777 3895968 -141693320 + MIR SINE MIR 29 217 -45 1272 256 49 23 chr10 3896317 3896664 -141692624 - MLT1A2 LTR MaLR -18 356 1 2708 169 62 108 chr10 3897046 3897257 -141692031 - LTR8A LTR ERV1 0 727 508 1991 149 10 3 chr10 3897257 3897565 -141691723 - AluSx SINE Alu -2 310 1 2708 169 62 108 chr10 3897565 3898114 -141691174 - LTR8A LTR ERV1 -219 508 2 482 333 34 19 chr10 3898319 3898583 -141690705 - LTR16A LTR ERVL -79 371 104 2580 113 8 3 chr10 3898633 3898995 -141690293 - THE1B LTR MaLR 0 364 1 725 230 288 25 chr10 3899267 3899781 -141689507 - LTR50 LTR ERVL -10 785 137 2128 136 7 3 chr10 3900001 3900311 -141688977 - AluSq SINE Alu -2 311 1 2089 120 23 3 chr10 3901271 3901570 -141687718 + AluSx SINE Alu 1 305 -7 504 0 0 0 chr10 3902595 3902651 -141686637 + (TTA)n Simple_repeat Simple_repeat 2 57 0 1796 148 24 10 chr10 3903956 3904253 -141685035 + AluSx SINE Alu 1 301 -11 1717 138 18 90 chr10 3905066 3905247 -141684041 - AluJo SINE Alu 0 312 164 2191 120 0 7 chr10 3905247 3905555 -141683733 - AluSg SINE Alu -4 306 1 1717 138 18 90 chr10 3905555 3905707 -141683581 - AluJo SINE Alu -148 164 3 416 282 8 8 chr10 3906902 3907019 -141682269 + Charlie8 DNA MER1_type 93 209 -2208 4109 126 21 11 chr10 3907225 3907854 -141681434 + MER41B LTR ERV1 1 635 0 228 323 72 60 chr10 3908042 3908209 -141681079 - MIR SINE MIR -55 207 39 1836 157 13 13 chr10 3908344 3908650 -141680638 + AluSx SINE Alu 1 306 -6 2338 105 0 6 chr10 3911043 3911358 -141677930 + AluSq SINE Alu 1 313 0 21 0 0 0 chr10 3912118 3912139 -141677149 + AT_rich Low_complexity Low_complexity 1 21 0 2070 134 0 3 chr10 3912142 3912447 -141676841 - AluSx SINE Alu -8 304 1 275 236 90 11 chr10 3912657 3912746 -141676542 + MER69 DNA AcHobo 99 194 -1032 927 221 43 59 chr10 3912808 3912935 -141676353 + MER69 DNA AcHobo 1457 1584 -942 1660 164 27 17 chr10 3912935 3913234 -141676054 + AluJo SINE Alu 1 302 -10 927 221 43 59 chr10 3913234 3913428 -141675860 + MER69 DNA AcHobo 1584 1773 -753 * 1524 251 70 13 chr10 3913420 3913950 -141675338 + MER69 DNA AcHobo 1959 2518 -8 2124 121 7 3 chr10 3913981 3914278 -141675010 - AluSg SINE Alu -12 298 1 199 218 135 113 chr10 3914785 3914918 -141674370 + L2 LINE L2 2727 2862 -452 24 0 0 0 chr10 3914918 3914942 -141674346 + AT_rich Low_complexity Low_complexity 1 24 0 2044 116 3 27 chr10 3914948 3915249 -141674039 - AluSx SINE Alu -18 294 1 186 304 163 11 chr10 3915445 3915537 -141673751 + L2 LINE L2 3196 3301 -12 392 0 21 0 chr10 3915698 3915746 -141673542 + (TTA)n Simple_repeat Simple_repeat 2 50 0 185 143 57 0 chr10 3915746 3915781 -141673507 - MIR SINE MIR -61 147 111 1743 151 7 11 chr10 3915885 3916164 -141673124 + AluJb SINE Alu 1 278 -34 1022 51 17 34 chr10 3916166 3916341 -141672947 + (GAAA)n Simple_repeat Simple_repeat 2 173 0 2125 120 3 0 chr10 3916525 3916817 -141672471 + AluSx SINE Alu 1 293 -19 182 321 54 36 chr10 3916835 3916947 -141672341 + MIR SINE MIR 30 143 -65 804 147 6 51 chr10 3916947 3916970 -141672318 + L1PA16 LINE L1 6018 6040 -126 1547 203 7 3 chr10 3916970 3917271 -141672017 + AluJo SINE Alu 1 302 -10 804 147 6 51 chr10 3917271 3917403 -141671885 + L1PA16 LINE L1 6040 6166 0 21 0 0 0 chr10 3917592 3917613 -141671675 + AT_rich Low_complexity Low_complexity 1 21 0 1562 205 7 4 chr10 3917740 3918038 -141671250 + AluJb SINE Alu 3 301 0 424 328 52 35 chr10 3919352 3919392 -141669896 - MLT1K LTR MaLR -5 583 545 1933 129 23 42 chr10 3919392 3919701 -141669587 - AluSq SINE Alu -10 303 1 424 328 52 35 chr10 3919701 3919889 -141669399 - MLT1K LTR MaLR -43 545 351 24 0 0 0 chr10 3920455 3920479 -141668809 + AT_rich Low_complexity Low_complexity 1 24 0 1477 164 4 9 chr10 3920479 3920705 -141668583 - AluSx SINE Alu -87 225 1 1439 134 5 0 chr10 3920707 3920923 -141668365 - AluSq SINE Alu -2 311 95 2102 149 3 0 chr10 3921660 3921968 -141667320 - AluSx SINE Alu -2 310 2 22 0 0 0 chr10 3922586 3922608 -141666680 + AT_rich Low_complexity Low_complexity 1 22 0 216 86 71 43 chr10 3922653 3922693 -141666595 + (TA)n Simple_repeat Simple_repeat 1 45 -27 1723 104 0 50 chr10 3922693 3922952 -141666336 - AluSc SINE Alu -19 290 45 216 86 71 43 chr10 3922952 3922981 -141666307 + (TA)n Simple_repeat Simple_repeat 45 72 0 1951 158 0 0 chr10 3924404 3924695 -141664593 + AluSx SINE Alu 1 291 -21 222 128 0 0 chr10 3924950 3924989 -141664299 + (CA)n Simple_repeat Simple_repeat 1 39 0 22 35 0 0 chr10 3925218 3925247 -141664041 + AT_rich Low_complexity Low_complexity 1 29 0 2433 64 0 10 chr10 3925825 3926120 -141663168 + AluY SINE Alu 1 292 -19 2289 169 14 43 chr10 3926961 3927094 -141662194 + MSTC LTR MaLR 2 137 -291 949 125 0 18 chr10 3927094 3927262 -141662026 + (TTTC)n Simple_repeat Simple_repeat 4 168 0 1996 139 0 0 chr10 3927262 3927542 -141661746 - AluSx SINE Alu -32 280 1 2289 169 14 43 chr10 3927542 3927845 -141661443 + MSTC LTR MaLR 135 426 -2 213 206 48 16 chr10 3929257 3929320 -141659968 + (CAGGG)n Simple_repeat Simple_repeat 2 66 0 230 271 43 50 chr10 3929905 3930045 -141659243 - MIR3 SINE MIR -62 146 8 808 189 0 0 chr10 3930627 3930759 -141658529 - THE1C LTR MaLR -243 132 1 198 0 0 0 chr10 3930924 3930946 -141658342 + (TC)n Simple_repeat Simple_repeat 2 23 0 187 236 125 28 chr10 3930988 3931060 -141658228 - L2 LINE L2 -20 3252 3174 2011 130 34 0 chr10 3931410 3931703 -141657585 - AluSx SINE Alu -9 303 1 792 190 72 5 chr10 3933540 3933735 -141655553 + MSTA LTR MaLR 1 208 -220 1963 107 66 19 chr10 3933764 3934083 -141655205 + MSTA LTR MaLR 95 428 0 345 266 98 60 chr10 3934160 3934666 -141654622 + L2 LINE L2 2646 3165 -148 1017 112 0 0 chr10 3935454 3935588 -141653700 + AluSg SINE Alu 1 134 -176 2552 63 0 0 chr10 3935588 3935887 -141653401 + AluY SINE Alu 1 299 -12 1751 191 16 22 chr10 3935958 3936325 -141652963 + MLT1A1 LTR MaLR 1 365 0 615 165 61 9 chr10 3936683 3936798 -141652490 - AluJo SINE Alu -176 136 16 2059 134 3 0 chr10 3937085 3937368 -141651920 + AluSx SINE Alu 6 289 -23 2691 185 25 10 chr10 3937401 3937920 -141651368 + L1MA9 LINE L1 5783 6309 -3 25 31 0 0 chr10 3937923 3937955 -141651333 + AT_rich Low_complexity Low_complexity 1 32 0 1911 145 3 0 chr10 3938730 3939193 -141650095 + AluSx SINE Alu 7 470 0 209 143 0 41 chr10 3939197 3939246 -141650042 + (GGAA)n Simple_repeat Simple_repeat 3 49 0 863 98 0 38 chr10 3940917 3941101 -141648187 + (CCCTAA)n Simple_repeat Simple_repeat 2 178 0 462 237 102 80 chr10 3941191 3941267 -141648021 - MLT1J LTR MaLR -4 507 434 1974 142 0 57 chr10 3941267 3941598 -141647690 - AluSx SINE Alu 0 312 1 462 237 102 80 chr10 3941598 3941795 -141647493 - MLT1J LTR MaLR -77 434 228 2484 77 3 0 chr10 3942311 3942611 -141646677 - AluSp SINE Alu -12 301 1 182 138 0 0 chr10 3942634 3942663 -141646625 - L2 LINE L2 0 3272 3244 247 266 13 0 chr10 3943492 3943571 -141645717 + (AATAG)n Simple_repeat Simple_repeat 4 83 0 656 216 15 26 chr10 3943732 3944077 -141645211 + CT-rich Low_complexity Low_complexity 1 340 0 26 0 0 0 chr10 3944333 3944359 -141644929 + AT_rich Low_complexity Low_complexity 1 26 0 215 215 92 15 chr10 3944471 3944536 -141644752 - L2 LINE L2 -62 3251 3182 369 251 20 29 chr10 3944572 3944685 -141644603 + L1MC1 LINE L1 6216 6329 -15 1965 154 3 0 chr10 3944685 3944996 -141644292 + AluJb SINE Alu 1 312 0 369 251 20 29 chr10 3944996 3945011 -141644277 + L1MC1 LINE L1 6329 6343 -1 260 211 218 30 chr10 3945414 3945547 -141643741 - L1ME3 LINE L1 -2 6160 6003 388 273 12 37 chr10 3945842 3946003 -141643285 + MIR SINE MIR 59 215 -47 225 0 0 0 chr10 3946384 3946409 -141642879 + (T)n Simple_repeat Simple_repeat 1 25 0 1123 211 4 4 chr10 3947344 3947571 -141641717 + L1PA15 LINE L1 5939 6165 0 21 0 0 0 chr10 3948137 3948158 -141641130 + AT_rich Low_complexity Low_complexity 1 21 0 668 257 19 10 chr10 3948485 3948691 -141640597 + MIR SINE MIR 41 248 -14 2289 113 3 0 chr10 3948697 3948998 -141640290 - AluSx SINE Alu -10 302 1 342 228 0 38 chr10 3949558 3949637 -141639651 - MLT1G LTR MaLR -474 81 6 5950 168 16 8 chr10 3950127 3951474 -141637814 + L1PA8 LINE L1 4819 6172 0 207 0 0 0 chr10 3952057 3952080 -141637208 + (T)n Simple_repeat Simple_repeat 1 23 0 1729 119 65 25 chr10 3953436 3953713 -141635575 - AluJo SINE Alu -24 288 1 2084 127 0 0 chr10 3954090 3954410 -141634878 - AluSq SINE Alu 0 320 1 2071 107 37 0 chr10 3955818 3956116 -141633172 - AluY SINE Alu -2 309 1 201 39 0 0 chr10 3956178 3956204 -141633084 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 257 319 80 0 chr10 3958596 3958709 -141630579 + MIR SINE MIR 119 240 -22 302 295 137 18 chr10 3958709 3959045 -141630243 - LTR16A LTR ERVL -4 446 71 22 0 0 0 chr10 3959692 3959714 -141629574 + AT_rich Low_complexity Low_complexity 1 22 0 1535 203 3 13 chr10 3960482 3960787 -141628501 - AluJo SINE Alu -10 302 1 628 313 127 17 chr10 3961812 3962231 -141627057 + MER69 DNA AcHobo 120 584 -642 * 1235 218 56 28 chr10 3962224 3962386 -141626902 + MER69 DNA AcHobo 2026 2182 -344 1857 167 0 3 chr10 3962386 3962686 -141626602 - AluJo SINE Alu -13 299 1 1235 218 56 28 chr10 3962686 3962949 -141626339 + MER69 DNA AcHobo 2182 2463 -63 336 302 54 0 chr10 3963596 3963725 -141625563 + L2 LINE L2 3173 3308 -5 285 316 177 69 chr10 3963766 3964344 -141624944 - L3 LINE CR1 -50 1527 856 2139 104 10 3 chr10 3964344 3964633 -141624655 - AluSg SINE Alu -19 291 1 285 316 177 69 chr10 3964633 3964767 -141624521 - L3 LINE CR1 -721 856 738 267 214 0 0 chr10 3964911 3964967 -141624321 - L2 LINE L2 -1 3312 3257 709 267 37 31 chr10 3965144 3965466 -141623822 + MER5C DNA MER1_type 1 324 0 2103 115 44 0 chr10 3965522 3965818 -141623470 - AluSg SINE Alu -1 309 1 230 318 30 0 chr10 3965994 3966060 -141623228 + L2 LINE L2 3205 3272 0 3160 170 22 74 chr10 3967106 3967835 -141621453 + LTR8 LTR ERV1 1 691 0 2154 103 3 3 chr10 3968450 3968740 -141620548 - AluSc SINE Alu -19 290 1 981 316 95 52 chr10 3969566 3970315 -141618973 + L2 LINE L2 1851 2631 -683 223 274 41 0 chr10 3970713 3970786 -141618502 - L2 LINE L2 -568 2746 2671 2202 153 23 8 chr10 3971839 3972193 -141617095 + THE1B LTR MaLR 5 363 -1 201 39 0 0 chr10 3975346 3975372 -141613916 + (TTTA)n Simple_repeat Simple_repeat 2 27 0 1402 245 114 38 chr10 3975770 3976244 -141613044 - MLT2B1 LTR ERVL -10 510 1 548 296 90 31 chr10 3976543 3976898 -141612390 + L1ME4a LINE L1 5508 5883 -238 1847 71 8 4 chr10 3977189 3977428 -141611860 + AluY SINE Alu 56 295 -16 3950 156 13 15 chr10 3977553 3978239 -141611049 + L1MA6 LINE L1 5616 6300 0 2212 109 0 20 chr10 3978301 3978604 -141610684 + AluSg SINE Alu 1 297 -13 313 295 0 27 chr10 3979586 3979698 -141609590 + MIR SINE MIR 152 260 -2 217 288 85 8 chr10 3980920 3981038 -141608250 + MIR SINE MIR 102 228 -34 486 332 25 20 chr10 3981190 3981392 -141607896 - MIR SINE MIR -48 214 12 997 155 54 0 chr10 3981756 3981924 -141607364 - AluJ SINE Alu -26 286 110 523 184 18 28 chr10 3982011 3982120 -141607168 - AluJ SINE Alu -203 109 2 349 207 27 0 chr10 3984818 3984929 -141604359 + C-rich Low_complexity Low_complexity 2 115 0 1484 154 91 58 chr10 3986805 3987168 -141602120 + THE1C LTR MaLR 1 375 0 2787 63 0 0 chr10 3987534 3987881 -141601407 - L1PA8 LINE L1 -4 6168 5822 392 35 0 221 chr10 3988234 3988320 -141600968 + MADE1 DNA Mariner 14 80 0 313 321 8 15 chr10 3988755 3988889 -141600399 - L2 LINE L2 -650 2664 2532 264 228 36 0 chr10 3988915 3989116 -141600172 + (TA)n Simple_repeat Simple_repeat 1 208 0 1778 167 37 0 chr10 3989127 3989427 -141599861 - AluSx SINE Alu -1 311 1 327 284 55 40 chr10 3989460 3989661 -141599627 - L2 LINE L2 -829 2485 2282 213 326 12 0 chr10 3990188 3990274 -141599014 - L2 LINE L2 -527 2787 2701 22 0 0 0 chr10 3990738 3990760 -141598528 + AT_rich Low_complexity Low_complexity 1 22 0 2116 115 18 0 chr10 3990767 3991053 -141598235 + AluSc SINE Alu 3 293 -16 195 300 108 33 chr10 3991560 3991680 -141597608 - MIR SINE MIR -74 188 60 25 0 0 0 chr10 3992557 3992582 -141596706 + AT_rich Low_complexity Low_complexity 1 25 0 335 210 25 76 chr10 3992717 3992836 -141596452 - Looper DNA T2_type -3 1555 1443 692 269 151 45 chr10 3992881 3993396 -141595892 + MLT1F1 LTR MaLR 1 565 -2 263 316 71 7 chr10 3993403 3993558 -141595730 - L1ME1 LINE L1 -4 6162 5998 1712 266 48 27 chr10 3993567 3994194 -141595094 - Looper DNA T2_type -782 776 137 424 204 79 130 chr10 3994191 3994263 -141595025 - Looper DNA T2_type -1343 215 141 * 1656 198 3 3 chr10 3994263 3994556 -141594732 - AluJb SINE Alu -19 293 1 424 204 79 130 chr10 3994556 3994699 -141594589 - Looper DNA T2_type -1417 141 11 1834 116 31 48 chr10 3995363 3995655 -141593633 + AluSx SINE Alu 8 294 -18 2390 78 7 0 chr10 3995655 3995951 -141593337 + AluY SINE Alu 1 298 -13 23 0 0 0 chr10 3996427 3996450 -141592838 + AT_rich Low_complexity Low_complexity 1 23 0 2270 90 13 13 chr10 3997894 3998205 -141591083 - AluSx SINE Alu -1 311 1 394 169 0 0 chr10 3999184 3999249 -141590039 - MER46A DNA MER2_type -2 234 170 1124 158 0 6 chr10 3999357 3999534 -141589754 - MER46A DNA MER2_type -60 176 1 447 241 6 63 chr10 3999645 3999819 -141589469 - MIR SINE MIR -11 251 88 610 257 94 62 chr10 4000480 4000854 -141588434 + L2 LINE L2 2920 3305 -8 391 178 14 14 chr10 4000938 4001011 -141588277 + MER63 DNA MER1_type 660 732 -328 1026 160 0 0 chr10 4001172 4001349 -141587939 + AluSg/x SINE Alu 135 311 0 264 349 47 0 chr10 4001409 4001558 -141587730 - MIR SINE MIR -49 213 58 492 329 18 9 chr10 4001792 4002020 -141587268 + MIR SINE MIR 33 262 0 252 258 21 75 chr10 4002416 4002509 -141586779 - MIR SINE MIR -102 160 73 318 26 0 0 chr10 4002724 4002763 -141586525 + (TAA)n Simple_repeat Simple_repeat 1 39 0 2212 112 0 0 chr10 4002769 4003056 -141586232 + AluSq SINE Alu 1 287 -26 4628 204 29 19 chr10 4003064 4004585 -141584703 - L1MA9 LINE L1 -28 6284 4747 1524 166 48 37 chr10 4004585 4004880 -141584408 - AluJb SINE Alu -14 298 1 4628 204 29 19 chr10 4004880 4004931 -141584357 - L1MA9 LINE L1 -1565 4747 4698 2111 130 0 0 chr10 4006642 4006934 -141582354 - AluSx SINE Alu -18 294 3 22 0 0 0 chr10 4006938 4006960 -141582328 + AT_rich Low_complexity Low_complexity 1 22 0 1984 146 0 22 chr10 4007217 4007533 -141581755 + AluSp SINE Alu 1 309 -4 26 30 0 0 chr10 4008927 4008960 -141580328 + AT_rich Low_complexity Low_complexity 1 33 0 2053 148 0 0 chr10 4009593 4009891 -141579397 - AluSx SINE Alu -14 298 1 2522 226 32 26 chr10 4010487 4010588 -141578700 - L1M4 LINE L1 -1081 5065 4966 1522 113 13 17 chr10 4010588 4010711 -141578577 + MER30 DNA MER1_type 1 124 -106 2390 87 0 0 chr10 4010711 4011009 -141578279 - AluSg SINE Alu -12 298 1 1522 113 13 17 chr10 4011009 4011116 -141578172 + MER30 DNA MER1_type 124 230 0 2522 226 32 26 chr10 4011116 4011757 -141577531 - L1M4 LINE L1 -1180 4966 4318 459 0 0 0 chr10 4011771 4011822 -141577466 + (TA)n Simple_repeat Simple_repeat 2 52 0 1189 102 0 0 chr10 4011824 4011971 -141577317 - AluSq/x SINE Alu -161 152 6 816 268 7 48 chr10 4011974 4012265 -141577023 - L1M4 LINE L1 -1821 4325 4047 23 0 0 0 chr10 4012382 4012405 -141576883 + AT_rich Low_complexity Low_complexity 1 23 0 919 111 0 15 chr10 4013347 4013482 -141575806 - AluSq/x SINE Alu -179 133 1 559 211 0 0 chr10 4014481 4014595 -141574693 + L1MA5A LINE L1 6179 6292 -5 397 187 0 44 chr10 4015719 4015810 -141573478 + Charlie8 DNA MER1_type 84 170 -2247 191 285 76 83 chr10 4016342 4016486 -141572802 + MIR SINE MIR 81 223 -39 2320 117 0 0 chr10 4018787 4019095 -141570193 - AluSc SINE Alu -1 308 1 186 324 40 14 chr10 4020614 4020688 -141568600 - MIR SINE MIR -69 193 118 629 271 86 51 chr10 4020795 4021223 -141568065 + MLT1J1 LTR MaLR 4 446 0 267 326 30 15 chr10 4021475 4021607 -141567681 - MIR SINE MIR -66 196 63 1984 123 36 10 chr10 4021680 4021981 -141567307 - AluSg SINE Alu -1 309 1 180 158 0 0 chr10 4022142 4022180 -141567108 + (TG)n Simple_repeat Simple_repeat 1 38 0 732 140 0 0 chr10 4022789 4022903 -141566385 - FLAM_C SINE Alu -15 118 5 2156 122 0 3 chr10 4022913 4023216 -141566072 - AluSx SINE Alu -10 302 1 189 0 0 0 chr10 4023228 4023249 -141566039 + (TAG)n Simple_repeat Simple_repeat 1 21 0 475 279 65 30 chr10 4024621 4024822 -141564466 + MER3 DNA MER1_type 2 209 0 468 145 15 30 chr10 4025292 4025423 -141563865 + CT-rich Low_complexity Low_complexity 4 132 0 514 206 5 33 chr10 4025460 4025644 -141563644 + C-rich Low_complexity Low_complexity 1 179 0 248 233 0 42 chr10 4025617 4025737 -141563551 + CT-rich Low_complexity Low_complexity 3 117 0 * 296 127 18 0 chr10 4025806 4025861 -141563427 + CT-rich Low_complexity Low_complexity 4 59 0 21 36 0 0 chr10 4027851 4027879 -141561409 + AT_rich Low_complexity Low_complexity 1 28 0 2116 139 7 0 chr10 4028117 4028427 -141560861 + AluSx SINE Alu 1 312 0 1792 213 11 8 chr10 4028595 4028957 -141560331 + MLT1A1 LTR MaLR 2 364 -1 248 320 13 0 chr10 4029684 4029759 -141559529 + L2 LINE L2 2863 2938 -376 700 255 45 25 chr10 4031016 4031216 -141558072 + MER20 DNA MER1_type 16 219 0 189 217 19 38 chr10 4031256 4031413 -141557875 + (TA)n Simple_repeat Simple_repeat 2 155 0 1042 83 0 0 chr10 4031564 4031696 -141557592 - AluSp/q SINE Alu -20 293 162 1213 195 77 49 chr10 4032036 4032323 -141556965 - AluJb SINE Alu -1 311 17 2119 92 20 31 chr10 4032599 4032892 -141556396 + AluSq SINE Alu 1 290 -23 221 0 0 33 chr10 4032895 4032925 -141556363 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 1983 174 33 12 chr10 4033237 4033798 -141555490 - L1P5 LINE L1 -601 5555 4977 1934 152 40 0 chr10 4035148 4035444 -141553844 + AluSx SINE Alu 1 308 -4 25 51 0 0 chr10 4036152 4036191 -141553097 + AT_rich Low_complexity Low_complexity 1 39 0 310 255 113 0 chr10 4036780 4036886 -141552402 - MIR3 SINE MIR 0 208 91 2381 56 0 11 chr10 4038194 4038538 -141550750 + AluY SINE Alu 1 341 0 26 50 0 0 chr10 4042634 4042674 -141546614 + AT_rich Low_complexity Low_complexity 1 40 0 2057 112 11 0 chr10 4043264 4043550 -141545738 + AluSq SINE Alu 1 289 -24 273 57 0 0 chr10 4043554 4043589 -141545699 + (TG)n Simple_repeat Simple_repeat 2 36 0 453 141 0 0 chr10 4043589 4043662 -141545626 + (TA)n Simple_repeat Simple_repeat 1 73 0 255 173 0 0 chr10 4043665 4043717 -141545571 + LTR66 LTR ERVL 404 455 -155 1779 132 50 21 chr10 4044820 4045101 -141544187 - AluSx SINE Alu -23 289 1 382 335 29 50 chr10 4045523 4045765 -141543523 - MIR SINE MIR -17 245 9 198 71 0 0 chr10 4048325 4048353 -141540935 + (TG)n Simple_repeat Simple_repeat 2 29 0 1985 134 14 0 chr10 4048396 4048717 -141540571 + AluSx SINE Alu 1 325 0 1511 240 170 23 chr10 4049088 4049916 -141539372 - Charlie2 DNA MER1_type -43 2819 1870 1729 240 63 58 chr10 4051062 4051132 -141538156 - MER69 DNA AcHobo -10 2516 2448 1945 147 3 3 chr10 4051132 4051425 -141537863 + AluSx SINE Alu 1 293 -19 1729 240 63 58 chr10 4051425 4052415 -141536873 - MER69 DNA AcHobo -78 2448 1451 344 268 71 9 chr10 4052822 4052934 -141536354 - MER69 DNA AcHobo -868 358 240 1186 225 58 36 chr10 4053120 4053449 -141535839 - MLT1A2 LTR MaLR -18 356 21 21 36 0 0 chr10 4053534 4053562 -141535726 + AT_rich Low_complexity Low_complexity 1 28 0 1467 208 48 14 chr10 4053566 4053860 -141535428 + AluJo SINE Alu 1 304 -8 228 269 26 39 chr10 4054737 4054815 -141534473 - MLT1F1-int LTR MaLR -508 863 787 420 309 34 11 chr10 4055212 4055390 -141533898 - MLT1F1-int LTR MaLR -882 489 308 1216 277 136 14 chr10 4055544 4056045 -141533243 - MLT1F1 LTR MaLR -5 562 1 184 292 62 15 chr10 4056527 4056592 -141532696 + L2 LINE L2 3208 3275 -38 1350 180 30 26 chr10 4057530 4057797 -141531491 - MLT1B LTR MaLR -122 268 1 2034 151 0 0 chr10 4058185 4058484 -141530804 - AluSx SINE Alu -12 300 2 839 113 48 0 chr10 4059202 4059326 -141529962 + AluSq/x SINE Alu 4 133 -180 204 97 0 0 chr10 4059329 4059360 -141529928 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 262 414 9 0 chr10 4060244 4060360 -141528928 + L2 LINE L2 3151 3267 -5 2343 100 0 0 chr10 4060395 4060695 -141528593 - AluSx SINE Alu -12 300 1 239 114 0 0 chr10 4063207 4063242 -141526046 - MIR SINE MIR -109 153 119 901 207 98 37 chr10 4063265 4063511 -141525777 - MIR SINE MIR -1 261 1 21 0 0 0 chr10 4065392 4065413 -141523875 + AT_rich Low_complexity Low_complexity 1 21 0 707 219 0 0 chr10 4065413 4065527 -141523761 - FLAM_A SINE Alu -19 114 1 412 294 82 39 chr10 4065539 4065894 -141523394 + L1ME4a LINE L1 5567 5933 -188 255 61 0 0 chr10 4066054 4066087 -141523201 + (TA)n Simple_repeat Simple_repeat 1 33 0 265 333 12 0 chr10 4066244 4066328 -141522960 - MIR SINE MIR -137 125 41 1894 132 81 31 chr10 4066834 4067191 -141522097 - THE1C LTR MaLR 0 375 1 277 269 82 74 chr10 4067901 4068157 -141521131 + L1MEd LINE L1 602 859 -5260 40 37 0 0 chr10 4068178 4068232 -141521056 + AT_rich Low_complexity Low_complexity 1 54 0 242 213 16 47 chr10 4068234 4068361 -141520927 + (TTA)n Simple_repeat Simple_repeat 3 125 0 2253 112 0 10 chr10 4068506 4068809 -141520479 - AluSc SINE Alu -9 300 1 265 297 42 8 chr10 4068809 4068927 -141520361 + L1MEd LINE L1 902 1023 -5096 314 273 116 41 chr10 4069046 4069365 -141519923 + L1MEd LINE L1 1223 1565 -4745 320 321 21 7 chr10 4070162 4070302 -141518986 + L1MEd LINE L1 2126 2267 -3862 281 281 91 40 chr10 4070413 4070612 -141518676 + L1MEd LINE L1 2294 2502 -3627 230 349 116 0 chr10 4070658 4070830 -141518458 + MIR SINE MIR 71 262 0 2180 136 0 0 chr10 4072082 4072390 -141516898 + AluSx SINE Alu 1 308 -4 443 187 19 65 chr10 4072576 4072683 -141516605 - MER5B DNA MER1_type -74 104 3 29 78 0 0 chr10 4073669 4073733 -141515555 + AT_rich Low_complexity Low_complexity 1 64 0 22 0 0 0 chr10 4073789 4073811 -141515477 + AT_rich Low_complexity Low_complexity 1 22 0 289 344 68 68 chr10 4073854 4074249 -141515039 - L2 LINE L2 0 3313 2919 320 226 15 22 chr10 4075535 4075672 -141513616 + (TG)n Simple_repeat Simple_repeat 1 136 0 243 0 0 0 chr10 4075873 4075900 -141513388 + (T)n Simple_repeat Simple_repeat 1 27 0 2712 201 60 11 chr10 4076787 4077353 -141511935 - LTR51 LTR ERV1 -77 594 1 746 151 0 13 chr10 4078144 4078303 -141510985 + (TTAGGG)n Simple_repeat Simple_repeat 4 160 0 190 349 92 42 chr10 4078478 4078716 -141510572 - L2 LINE L2 -1273 2041 1792 668 251 0 6 chr10 4079111 4079278 -141510010 + MER104 DNA Tc2 14 179 -1 594 179 32 49 chr10 4080824 4080947 -141508341 - FLAM_C SINE Alu -19 124 4 759 224 21 47 chr10 4082204 4082262 -141507026 - AluJo SINE Alu -125 187 129 1494 103 3 94 chr10 4082262 4082614 -141506674 - AluSc SINE Alu 0 309 1 759 224 21 47 chr10 4082614 4082747 -141506541 - AluJo SINE Alu -183 129 1 229 163 20 0 chr10 4082748 4082797 -141506491 - L1MCc LINE L1 -5076 1865 1816 * 3040 251 54 4 chr10 4082794 4083794 -141505494 + L1ME3A LINE L1 3791 4840 -1306 934 157 13 0 chr10 4085166 4085319 -141503969 - AluSg/x SINE Alu -4 306 152 370 265 160 6 chr10 4085969 4086150 -141503138 + L2 LINE L2 3102 3310 -3 23 0 0 0 chr10 4086288 4086311 -141502977 + AT_rich Low_complexity Low_complexity 1 23 0 2226 317 84 34 chr10 4086801 4088176 -141501112 - L2 LINE L2 -811 2503 1059 262 254 82 9 chr10 4088179 4088289 -141500999 + HAL1 LINE L1 839 956 -1551 203 374 61 0 chr10 4088756 4088855 -141500433 + L2 LINE L2 3106 3210 -62 832 287 43 30 chr10 4088872 4089196 -141500092 + L1ME3A LINE L1 4960 5278 -884 1440 201 0 42 chr10 4089196 4089504 -141499784 - AluJo SINE Alu -17 295 1 832 287 43 30 chr10 4089504 4089996 -141499292 + L1ME3A LINE L1 5278 5789 -373 500 230 49 75 chr10 4090029 4090255 -141499033 + L1ME3A LINE L1 5942 6161 -9 27 0 0 0 chr10 4090900 4090927 -141498361 + AT_rich Low_complexity Low_complexity 1 27 0 190 269 239 0 chr10 4091406 4091473 -141497815 - L3b LINE CR1 -71 1512 1430 3150 67 24 40 chr10 4092018 4092469 -141496819 + MLT2A1 LTR ERVL 1 444 0 1294 250 118 34 chr10 4092576 4092994 -141496294 - L1MCc LINE L1 -4889 1534 1188 1272 211 157 59 chr10 4092994 4093505 -141495783 - MER34B LTR ERV1 0 565 5 1294 250 118 34 chr10 4093505 4093947 -141495341 - L1MCc LINE L1 -5235 1188 784 838 243 57 24 chr10 4094202 4094572 -141494716 - L1MCc LINE L1 -6025 398 17 280 283 130 22 chr10 4094891 4095121 -141494167 - L1M2 LINE L1 -744 5556 5302 201 39 0 0 chr10 4095262 4095288 -141494000 + (T)n Simple_repeat Simple_repeat 1 26 0 339 326 22 17 chr10 4095649 4095679 -141493609 - L1M4 LINE L1 -1089 5057 5029 1824 108 93 0 chr10 4095679 4095948 -141493340 - AluSx SINE Alu -18 294 1 339 326 22 17 chr10 4095948 4096095 -141493193 - L1M4 LINE L1 -1117 5029 4879 843 323 87 40 chr10 4096116 4096977 -141492311 - L1M4 LINE L1 -1331 4815 3914 468 305 316 21 chr10 4097049 4097566 -141491722 + L2 LINE L2 1132 1495 -1819 2149 127 0 3 chr10 4097566 4097866 -141491422 - AluSx SINE Alu -13 299 1 468 305 316 21 chr10 4097866 4097931 -141491357 + L2 LINE L2 1495 1886 -1428 968 316 169 50 chr10 4097945 4098780 -141490508 + L2 LINE L2 2140 3108 -205 2263 102 0 3 chr10 4098780 4099083 -141490205 - AluSx SINE Alu -10 302 1 968 316 169 50 chr10 4099083 4099294 -141489994 + L2 LINE L2 3108 3292 -21 675 331 38 44 chr10 4099333 4099856 -141489432 - L1M4 LINE L1 -2375 3771 3252 1908 192 67 23 chr10 4099938 4100459 -141488829 + L1MB3 LINE L1 5636 6179 -4 300 279 84 45 chr10 4100668 4100822 -141488466 - L1M4 LINE L1 -3146 3000 2841 293 122 0 0 chr10 4100914 4100963 -141488325 - L1MA9 LINE L1 -38 6274 6226 2879 111 45 189 chr10 4101082 4102000 -141487288 - LTR1 LTR ERV1 0 785 1 294 272 29 10 chr10 4102027 4102130 -141487158 - L1MA9 LINE L1 -164 6148 6044 25 51 0 0 chr10 4102251 4102290 -141486998 + AT_rich Low_complexity Low_complexity 1 39 0 36 64 0 0 chr10 4105017 4105064 -141484224 + AT_rich Low_complexity Low_complexity 1 47 0 1000 155 6 0 chr10 4105064 4105225 -141484063 - AluSg/x SINE Alu -1 311 150 289 325 60 17 chr10 4106348 4106465 -141482823 - L2 LINE L2 0 3313 3192 1471 201 34 20 chr10 4106469 4106872 -141482416 + L1MB3 LINE L1 5271 5669 -514 830 176 19 6 chr10 4106875 4107034 -141482254 + FRAM SINE Alu 1 158 -18 1831 206 91 2 chr10 4107044 4107516 -141481772 + L1MB3 LINE L1 5662 6175 -8 270 271 98 57 chr10 4107634 4107756 -141481532 - L2 LINE L2 -243 3029 2903 1039 128 137 0 chr10 4108567 4108771 -141480517 + L1M2 LINE L1 5558 5789 -502 232 203 0 17 chr10 4109551 4109610 -141479678 + (TA)n Simple_repeat Simple_repeat 1 58 0 186 43 0 0 chr10 4109637 4109649 -141479639 + (CA)n Simple_repeat Simple_repeat 1 35 0 186 43 0 0 chr10 4109649 4109672 -141479616 + (CA)n Simple_repeat Simple_repeat 2 24 0 210 143 0 0 chr10 4109739 4109774 -141479514 + (CATATA)n Simple_repeat Simple_repeat 2 36 0 747 269 12 64 chr10 4110328 4110577 -141478711 + L2 LINE L2 3078 3313 0 2317 113 0 0 chr10 4112081 4112391 -141476897 - AluSx SINE Alu 0 312 3 207 88 0 0 chr10 4112525 4112559 -141476729 + (A)n Simple_repeat Simple_repeat 1 34 0 296 297 80 14 chr10 4112582 4112720 -141476568 + MIR SINE MIR 82 228 -34 362 332 98 4 chr10 4113373 4113647 -141475641 + HsTC2 DNA Tc2 578 877 -1021 2198 106 0 0 chr10 4113824 4114161 -141475127 - AluSq SINE Alu 0 337 1 208 246 53 0 chr10 4116395 4116452 -141472836 + MIR SINE MIR 108 167 -95 264 250 50 70 chr10 4116473 4116573 -141472715 + L2 LINE L2 3211 3308 -5 234 326 47 0 chr10 4117007 4117093 -141472195 + L2 LINE L2 3150 3239 -33 2009 128 59 9 chr10 4117772 4118093 -141471195 - MER1B DNA MER1_type 0 337 1 2099 100 4 0 chr10 4119133 4119446 -141469842 + AluSg SINE Alu 1 314 0 477 312 69 26 chr10 4120922 4121111 -141468177 + MIR SINE MIR 2 198 -64 1433 228 39 15 chr10 4121411 4121749 -141467539 - MSTD LTR MaLR -50 346 1 1459 129 133 33 chr10 4122498 4122769 -141466519 - AluSg SINE Alu -12 298 1 1940 162 0 0 chr10 4123542 4123844 -141465444 + AluSx SINE Alu 6 307 -5 252 299 95 7 chr10 4124265 4124402 -141464886 + L1ME LINE L1 5514 5662 -502 528 313 83 25 chr10 4125291 4125569 -141463719 + HAL1 LINE L1 793 1086 -1421 275 224 59 0 chr10 4125624 4125709 -141463579 - L1MC2 LINE L1 -9 6335 6246 2371 63 10 20 chr10 4125772 4126073 -141463215 + AluY SINE Alu 5 302 -9 1272 242 72 14 chr10 4126179 4126691 -141462597 + L1M4 LINE L1 2965 3506 -2640 4422 206 154 57 chr10 4126716 4126773 -141462515 - L1MCa LINE L1 -4489 1937 1887 1635 166 7 18 chr10 4126773 4127050 -141462238 - AluJo SINE Alu 0 312 39 4422 206 154 57 chr10 4127050 4128725 -141460563 - L1MCa LINE L1 -4539 1887 37 479 282 136 84 chr10 4128786 4129300 -141459988 + HAL1 LINE L1 1088 1628 -879 180 176 0 0 chr10 4129800 4129834 -141459454 + GA-rich Low_complexity Low_complexity 3 36 0 674 178 24 17 chr10 4129847 4130463 -141458825 + GA-rich Low_complexity Low_complexity 1 619 0 387 0 0 0 chr10 4131501 4131544 -141457744 + (TA)n Simple_repeat Simple_repeat 1 43 0 183 42 0 0 chr10 4131544 4131568 -141457720 + (TG)n Simple_repeat Simple_repeat 2 25 0 2209 126 0 3 chr10 4132630 4132940 -141456348 + AluSx SINE Alu 1 309 -3 193 278 19 0 chr10 4133268 4133322 -141455966 + MIR SINE MIR 83 137 -71 2002 137 3 0 chr10 4133747 4134032 -141455256 - AluSx SINE Alu -26 286 1 4642 174 24 1 chr10 4135086 4135891 -141453397 + Tigger1 DNA MER2_type 1 823 -1595 3420 135 107 0 chr10 4135894 4136463 -141452825 + Tigger1 DNA MER2_type 1789 2418 0 2506 58 0 13 chr10 4136749 4137057 -141452231 + AluY SINE Alu 1 304 -7 456 276 62 67 chr10 4137357 4137698 -141451590 - MLT1G1 LTR MaLR -252 343 5 2079 115 0 11 chr10 4137880 4138204 -141451084 + AluSx SINE Alu 1 321 0 2450 185 85 39 chr10 4138454 4138962 -141450326 + LTR26B LTR ERV1 1 531 0 460 188 152 94 chr10 4139042 4139218 -141450070 + MLT1E1 LTR MaLR 1 194 -430 4853 107 1 65 chr10 4139218 4139779 -141449509 - LTR8 LTR ERV1 0 691 187 1973 121 32 4 chr10 4139779 4140059 -141449229 + AluSx SINE Alu 1 288 -24 4853 107 1 65 chr10 4140059 4140235 -141449053 - LTR8 LTR ERV1 -504 187 1 460 188 152 94 chr10 4140235 4140282 -141449006 + MLT1E1 LTR MaLR 194 237 -387 1791 203 62 52 chr10 4141078 4141296 -141447992 - LTR54 LTR ERV1 -3 507 293 3403 128 91 0 chr10 4141296 4141804 -141447484 + MER41C LTR ERV1 1 554 0 1791 203 62 52 chr10 4141804 4142087 -141447201 - LTR54 LTR ERV1 -217 293 1 1801 130 22 4 chr10 4142992 4143269 -141446019 - AluSx SINE Alu -30 282 1 288 274 0 24 chr10 4143883 4143967 -141445321 - L1MC4 LINE L1 -1347 6695 6614 203 235 0 15 chr10 4143968 4144036 -141445252 + (TATATG)n Simple_repeat Simple_repeat 2 68 0 357 24 0 0 chr10 4144067 4144109 -141445179 + (TG)n Simple_repeat Simple_repeat 2 43 0 1360 216 17 3 chr10 4144521 4144808 -141444480 - L1MB5 LINE L1 0 6174 5884 2181 99 3 3 chr10 4144905 4145221 -141444067 + AluSx SINE Alu 1 316 0 838 259 39 104 chr10 4145543 4145628 -141443660 - L1ME3A LINE L1 -309 5861 5772 1857 120 8 0 chr10 4145628 4145887 -141443401 + AluSx SINE Alu 1 261 -51 838 259 39 104 chr10 4145887 4146415 -141442873 - L1ME3A LINE L1 -398 5772 5288 201 263 0 0 chr10 4146875 4146932 -141442356 + T-rich Low_complexity Low_complexity 1 57 0 287 308 92 64 chr10 4147301 4147627 -141441661 - L1MB5 LINE L1 -461 5660 5323 1938 151 176 14 chr10 4147632 4147996 -141441292 - MSTA LTR MaLR -1 427 5 205 209 47 35 chr10 4147996 4148076 -141441212 + (TA)n Simple_repeat Simple_repeat 1 81 0 22 0 0 0 chr10 4148153 4148175 -141441113 + AT_rich Low_complexity Low_complexity 1 22 0 353 320 113 34 chr10 4148497 4148912 -141440376 - L1MEd LINE L1 -5232 887 440 2238 122 0 0 chr10 4151420 4151716 -141437572 - AluSx SINE Alu -16 296 1 2417 65 0 3 chr10 4152233 4152527 -141436761 + AluY SINE Alu 1 293 -18 240 145 26 26 chr10 4154409 4154485 -141434803 + (TAGA)n Simple_repeat Simple_repeat 1 76 0 241 231 19 0 chr10 4154491 4154543 -141434745 + GA-rich Low_complexity Low_complexity 1 53 0 240 255 85 32 chr10 4154625 4154719 -141434569 + LTR67 LTR ERVL 457 555 -2 2199 84 7 30 chr10 4155176 4155473 -141433815 + AluSc SINE Alu 12 301 -8 212 253 84 12 chr10 4155477 4155560 -141433728 + MIR SINE MIR 150 238 -24 337 204 43 21 chr10 4155602 4155695 -141433593 + MLT1J LTR MaLR 105 199 -312 21 71 0 0 chr10 4157483 4157525 -141431763 + AT_rich Low_complexity Low_complexity 1 42 0 583 201 45 126 chr10 4157583 4157987 -141431301 - HAL1 LINE L1 -1313 1194 824 231 90 154 64 chr10 4158006 4158084 -141431204 - HAL1 LINE L1 -2273 234 150 5018 178 30 5 chr10 4158092 4158631 -141430657 + L1PB4 LINE L1 4621 5145 -1011 303 28 0 0 chr10 4158631 4158667 -141430621 + (TAA)n Simple_repeat Simple_repeat 2 37 0 5018 178 30 5 chr10 4158667 4159570 -141429718 + L1PB4 LINE L1 5145 6101 -55 601 192 26 40 chr10 4159569 4159720 -141429568 - L1MB5 LINE L1 -794 5352 5204 * 267 79 0 0 chr10 4159809 4159847 -141429441 + L1PB4 LINE L1 6112 6149 -7 1801 127 9 67 chr10 4160485 4160815 -141428473 + AluSx SINE Alu 1 311 -1 207 239 0 22 chr10 4161615 4161661 -141427627 - MIR SINE MIR -187 75 31 2254 112 0 0 chr10 4162375 4162670 -141426618 + AluSx SINE Alu 2 296 -16 498 331 0 11 chr10 4162986 4163164 -141426124 + (TG)n Simple_repeat Simple_repeat 1 176 0 262 279 0 44 chr10 4163189 4163372 -141425916 + (TATATG)n Simple_repeat Simple_repeat 3 177 0 1870 99 23 11 chr10 4165500 4165762 -141423526 + AluSg1 SINE Alu 39 303 -6 1433 231 140 7 chr10 4166206 4166612 -141422676 + MER65C LTR ERV1 1 460 -1 2035 164 55 33 chr10 4168588 4169131 -141420157 - MLT2A2 LTR ERVL -1 553 1 3415 130 2 2 chr10 4170302 4170793 -141418495 + L1PB1 LINE L1 5661 6151 0 25 31 0 0 chr10 4171048 4171080 -141418208 + AT_rich Low_complexity Low_complexity 1 32 0 1590 176 23 20 chr10 4171820 4172126 -141417162 - AluJb SINE Alu -5 307 1 210 269 298 0 chr10 4173462 4173566 -141415722 - L2 LINE L2 0 3272 3138 1660 130 30 15 chr10 4173704 4173973 -141415315 - L1PA13 LINE L1 -110 6053 5781 264 223 117 21 chr10 4174136 4174230 -141415058 - MER5A DNA MER1_type -83 106 4 243 0 0 0 chr10 4174802 4174829 -141414459 + (A)n Simple_repeat Simple_repeat 1 27 0 4504 124 19 5 chr10 4175770 4176417 -141412871 - L1PA13 LINE L1 0 6163 5508 190 255 85 106 chr10 4176567 4176661 -141412627 - MIR SINE MIR -100 108 17 304 250 35 132 chr10 4179615 4179843 -141409445 + L2 LINE L2 2291 2496 -818 1273 169 8 36 chr10 4179872 4180120 -141409168 - AluJo SINE Alu -32 280 40 704 141 0 0 chr10 4180120 4180219 -141409069 - AluJ/FLAM SINE Alu -211 101 3 210 296 14 0 chr10 4180220 4180291 -141408997 + L2 LINE L2 2776 2847 -467 1050 90 0 0 chr10 4181520 4181692 -141407596 + AluSx SINE Alu 1 172 -344 2037 137 0 10 chr10 4181692 4182006 -141407282 + AluSx SINE Alu 1 311 -1 1050 90 0 0 chr10 4182006 4182036 -141407252 + AluSx SINE Alu 171 516 0 310 319 34 46 chr10 4182578 4182763 -141406525 + MIR3 SINE MIR 17 198 -10 483 134 12 0 chr10 4184554 4184659 -141404629 - AluSc SINE Alu 0 311 206 41 98 0 0 chr10 4186038 4186170 -141403118 + AT_rich Low_complexity Low_complexity 1 132 0 2130 71 10 24 chr10 4186396 4186710 -141402578 + AluY SINE Alu 3 311 0 711 215 19 66 chr10 4188040 4188296 -141400992 - MER31B LTR ERV1 -222 244 1 2147 119 14 0 chr10 4189634 4189929 -141399359 + AluSp SINE Alu 1 299 -14 774 269 23 5 chr10 4191789 4192005 -141397283 + L2 LINE L2 2420 2639 -675 220 295 96 75 chr10 4192058 4192444 -141396844 + L2 LINE L2 2829 3222 -91 203 138 0 0 chr10 4194398 4194427 -141394861 + (TAAG)n Simple_repeat Simple_repeat 3 31 0 629 181 8 0 chr10 4194507 4194640 -141394648 + GA-rich Low_complexity Low_complexity 2 135 0 181 343 95 19 chr10 4196732 4196837 -141392451 + L2 LINE L2 3200 3312 -1 1864 191 27 39 chr10 4197005 4197444 -141391844 - Tigger2a DNA MER2_type 0 434 1 34 55 0 0 chr10 4197506 4197561 -141391727 + AT_rich Low_complexity Low_complexity 1 55 0 329 329 0 77 chr10 4199024 4199037 -141390251 - MIR SINE MIR -81 181 169 1920 205 73 9 chr10 4199037 4199476 -141389812 - MLT1C LTR MaLR 0 467 1 329 329 0 77 chr10 4199476 4199617 -141389671 - MIR SINE MIR -93 169 39 235 214 0 0 chr10 4199968 4200010 -141389278 + polypyrimidine Low_complexity Low_complexity 2 43 0 23 0 0 0 chr10 4200175 4200198 -141389090 + AT_rich Low_complexity Low_complexity 1 23 0 2149 106 0 0 chr10 4204231 4204513 -141384775 + AluSx SINE Alu 1 282 -30 1748 157 42 12 chr10 4204719 4205051 -141384237 - L1PA15 LINE L1 0 6165 5824 208 313 104 26 chr10 4205459 4205574 -141383714 - L2 LINE L2 0 3313 3190 859 192 32 96 chr10 4205643 4205924 -141383364 + MLT2B1 LTR ERVL 5 267 -253 260 227 0 6 chr10 4205973 4206145 -141383143 + (TA)n Simple_repeat Simple_repeat 1 171 0 258 179 0 0 chr10 4206158 4206214 -141383074 + MLT2B1 LTR ERVL 460 515 0 2544 112 17 0 chr10 4206865 4207223 -141382065 - THE1B LTR MaLR 0 364 1 216 333 126 0 chr10 4208152 4208239 -141381049 + L2 LINE L2 3201 3298 -15 246 62 0 0 chr10 4208240 4208272 -141381016 + (TGAA)n Simple_repeat Simple_repeat 1 32 0 1544 139 171 0 chr10 4209053 4209311 -141379977 - AluSx SINE Alu -10 302 1 480 231 110 50 chr10 4209672 4209854 -141379434 + MER58A DNA MER1_type 23 215 -9 2011 128 13 7 chr10 4209913 4210217 -141379071 + AluSx SINE Alu 1 306 -6 506 262 105 88 chr10 4210589 4210761 -141378527 + L1MEc LINE L1 2135 2302 -3913 2268 67 0 27 chr10 4210761 4211061 -141378227 - AluY SINE Alu -19 292 1 506 262 105 88 chr10 4211061 4211099 -141378189 + L1MEc LINE L1 2302 2338 -3877 1198 212 134 24 chr10 4211099 4211471 -141377817 + MLT2D LTR ERVL 1 413 -1 506 262 105 88 chr10 4211471 4211840 -141377448 + L1MEc LINE L1 2338 2686 -3529 813 189 9 0 chr10 4212579 4212807 -141376481 + (TCCA)n Simple_repeat Simple_repeat 1 230 0 480 305 7 13 chr10 4212845 4212996 -141376292 - L2 LINE L2 -6 3307 3158 2465 62 7 0 chr10 4214175 4214481 -141374807 + AluY SINE Alu 2 309 -2 243 61 0 0 chr10 4214563 4214596 -141374692 + (TGAA)n Simple_repeat Simple_repeat 2 34 0 183 362 0 0 chr10 4215433 4215491 -141373797 + L2 LINE L2 3245 3302 -11 21 0 0 0 chr10 4217041 4217062 -141372226 + AT_rich Low_complexity Low_complexity 1 21 0 8402 157 21 12 chr10 4217400 4218947 -141370341 + Tigger1 DNA MER2_type 2 1562 -856 1037 166 32 9 chr10 4218948 4219165 -141370123 + Tigger1 DNA MER2_type 2197 2418 0 2163 128 10 7 chr10 4219521 4219827 -141369461 + AluSx SINE Alu 3 309 -3 377 245 32 0 chr10 4220045 4220139 -141369149 - Tigger2 DNA MER2_type -10 2708 2612 3875 187 24 5 chr10 4220144 4220951 -141368337 - Tigger2 DNA MER2_type -1894 824 3 3507 107 4 4 chr10 4222343 4222867 -141366421 - L1PB1 LINE L1 -5 6146 5623 2143 107 3 75 chr10 4222869 4223406 -141365882 + L1PB1 LINE L1 5086 5597 -554 185 105 0 26 chr10 4226943 4226981 -141362307 + (CA)n Simple_repeat Simple_repeat 2 38 0 833 331 72 24 chr10 4230095 4230960 -141358328 - ERVL-F LTR ERVL -4424 1340 361 826 84 0 15 chr10 4231087 4231218 -141358070 + (TTTC)n Simple_repeat Simple_repeat 2 130 0 273 275 61 15 chr10 4231256 4231324 -141357964 - ERVL-F LTR ERVL -5624 140 77 309 51 0 0 chr10 4231324 4231363 -141357925 + (CA)n Simple_repeat Simple_repeat 2 40 0 273 275 61 15 chr10 4231363 4231425 -141357863 - ERVL-F LTR ERVL -5687 77 4 1133 252 89 14 chr10 4231469 4231818 -141357470 - MLT2F LTR ERVL -58 605 231 1117 222 5 0 chr10 4231865 4232063 -141357225 + AluJb SINE Alu 86 284 -28 246 302 101 23 chr10 4232082 4232211 -141357077 - MLT2F LTR ERVL -524 139 1 21 36 0 0 chr10 4234444 4234472 -141354816 + AT_rich Low_complexity Low_complexity 1 28 0 470 327 97 27 chr10 4234516 4234886 -141354402 + L2 LINE L2 1728 2123 -1191 281 293 97 94 chr10 4235087 4235292 -141353996 + L2 LINE L2 2560 2763 -509 1835 147 63 0 chr10 4235292 4235577 -141353711 - AluSx SINE Alu -9 303 1 281 293 97 94 chr10 4235577 4235849 -141353439 + L2 LINE L2 2763 3043 -229 2562 194 19 41 chr10 4235947 4236514 -141352774 - L1MB3 LINE L1 -339 5844 5290 22 0 0 0 chr10 4236540 4236562 -141352726 + AT_rich Low_complexity Low_complexity 1 22 0 783 195 24 76 chr10 4238954 4239164 -141350124 + MER20 DNA MER1_type 1 199 -20 1996 101 0 31 chr10 4239172 4239460 -141349828 + AluSx SINE Alu 1 279 -33 276 120 0 0 chr10 4239462 4239512 -141349776 + (CAAAA)n Simple_repeat Simple_repeat 1 50 0 1397 235 63 16 chr10 4240577 4240956 -141348332 - L1MC2 LINE L1 -9 6335 5939 338 288 74 25 chr10 4241449 4241612 -141347676 - MLT1J2 LTR MaLR -11 439 269 372 342 0 0 chr10 4241683 4241800 -141347488 - MLT1J1 LTR MaLR -291 155 39 418 223 51 9 chr10 4242214 4242351 -141346937 + L1ME3A LINE L1 6018 6168 -2 191 310 155 17 chr10 4242765 4242881 -141346407 + L2 LINE L2 3179 3310 -3 335 226 47 75 chr10 4243906 4244012 -141345276 + LTR16C LTR ERVL 387 489 -2 1383 170 46 87 chr10 4244675 4244998 -141344290 - AluJb SINE Alu -2 310 1 1333 51 11 0 chr10 4247390 4247568 -141341720 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 2175 134 0 3 chr10 4247577 4247890 -141341398 - AluSx SINE Alu 0 312 1 246 32 0 0 chr10 4248419 4248450 -141340838 + (CA)n Simple_repeat Simple_repeat 2 32 0 219 182 61 0 chr10 4248867 4248933 -141340355 + (TAGA)n Simple_repeat Simple_repeat 1 70 0 247 270 112 77 chr10 4249045 4249304 -141339984 + L2 LINE L2 2636 2903 -411 287 263 94 88 chr10 4249575 4249746 -141339542 + LTR16A1 LTR ERVL 286 457 0 199 360 40 8 chr10 4249910 4250035 -141339253 + L2 LINE L2 3113 3241 -72 1562 198 10 30 chr10 4250649 4250787 -141338501 + AluJb SINE Alu 1 140 -172 2318 73 3 3 chr10 4250787 4251073 -141338215 + AluSp SINE Alu 24 309 -4 1562 198 10 30 chr10 4251073 4251232 -141338056 + AluJb SINE Alu 140 292 -20 26 0 0 0 chr10 4251261 4251287 -141338001 + AT_rich Low_complexity Low_complexity 1 26 0 542 304 203 14 chr10 4251310 4251665 -141337623 - L2 LINE L2 0 3313 2892 21 0 0 0 chr10 4252283 4252304 -141336984 + AT_rich Low_complexity Low_complexity 1 21 0 244 328 0 0 chr10 4252307 4252371 -141336917 + (TG)n Simple_repeat Simple_repeat 1 64 0 210 262 0 0 chr10 4252384 4252468 -141336820 + (TG)n Simple_repeat Simple_repeat 2 85 0 2929 80 3 0 chr10 4254043 4254395 -141334893 - THE1A LTR MaLR -1 354 2 1827 164 0 10 chr10 4255174 4255462 -141333826 + AluJo SINE Alu 1 286 -22 252 77 0 0 chr10 4255462 4255501 -141333787 + (CATA)n Simple_repeat Simple_repeat 2 40 0 346 289 91 5 chr10 4257298 4257485 -141331803 - HAL1 LINE L1 -588 1919 1717 390 270 39 103 chr10 4257548 4257781 -141331507 - HAL1 LINE L1 -1448 1059 842 423 0 0 0 chr10 4258122 4258169 -141331119 + (TA)n Simple_repeat Simple_repeat 2 48 0 1516 238 127 30 chr10 4259227 4259693 -141329595 + MLT2B2 LTR ERVL 1 511 -4 2345 125 0 3 chr10 4259868 4260259 -141329029 - L1PA10 LINE L1 -570 5598 5209 4097 93 28 0 chr10 4260259 4260794 -141328494 + L1PA10 LINE L1 5618 6168 0 1263 183 0 8 chr10 4261258 4261493 -141327795 - Tigger7 DNA MER2_type 0 2491 2259 271 182 0 0 chr10 4261512 4261556 -141327732 - Tigger7 DNA MER2_type -292 47 4 228 327 67 30 chr10 4261774 4261939 -141327349 - MIR SINE MIR -3 259 89 185 312 56 40 chr10 4264266 4264391 -141324897 + L2 LINE L2 2659 2785 -529 352 268 113 30 chr10 4264421 4264589 -141324699 + MIR SINE MIR 11 192 -70 927 184 5 40 chr10 4265035 4265236 -141324052 - MER39B LTR ERV1 0 653 460 2224 227 39 16 chr10 4265239 4265754 -141323534 + MER87 LTR ERV1 11 537 -4 2718 142 35 22 chr10 4265757 4266215 -141323073 - MER39B LTR ERV1 -189 464 1 1190 231 75 77 chr10 4266574 4267107 -141322181 - MER34B LTR ERV1 0 565 34 429 171 0 0 chr10 4268389 4268459 -141320829 + L1MA3 LINE L1 6180 6249 -56 612 141 0 0 chr10 4268462 4268554 -141320734 + L1MA1 LINE L1 6211 6302 0 1991 147 0 3 chr10 4270522 4270842 -141318446 - AluSx SINE Alu 0 312 7 2591 146 82 49 chr10 4271273 4271352 -141317936 - MER34B LTR ERV1 0 565 490 540 30 0 0 chr10 4271352 4271419 -141317869 + L1PB3 LINE L1 6087 6153 -1 2591 146 82 49 chr10 4271419 4271886 -141317402 - MER34B LTR ERV1 -75 490 1 1815 118 0 0 chr10 4272489 4272734 -141316554 - AluSx SINE Alu -4 308 64 1737 220 66 18 chr10 4274594 4275035 -141314253 + MLT1C LTR MaLR 6 467 0 2602 59 0 0 chr10 4275891 4276195 -141313093 + AluY SINE Alu 1 304 -7 31 26 0 0 chr10 4276286 4276324 -141312964 + AT_rich Low_complexity Low_complexity 1 38 0 26 0 0 0 chr10 4277030 4277056 -141312232 + AT_rich Low_complexity Low_complexity 1 26 0 23 68 0 0 chr10 4277471 4277515 -141311773 + AT_rich Low_complexity Low_complexity 1 44 0 1592 228 25 11 chr10 4277955 4278314 -141310974 - MLT1A1 LTR MaLR -1 364 1 27 0 0 0 chr10 4278470 4278497 -141310791 + AT_rich Low_complexity Low_complexity 1 27 0 757 287 75 37 chr10 4279128 4279584 -141309704 - L1ME3 LINE L1 -211 6020 5548 479 67 0 0 chr10 4279690 4279750 -141309538 + Alu SINE Alu 233 292 -18 269 208 0 56 chr10 4279753 4279825 -141309463 + MIR SINE MIR 172 239 -23 263 286 0 0 chr10 4279833 4279889 -141309399 + MIR SINE MIR 200 255 -7 1643 158 0 58 chr10 4279997 4280308 -141308980 + AluJb SINE Alu 1 293 -19 357 174 0 0 chr10 4280309 4280378 -141308910 + GA-rich Low_complexity Low_complexity 2 70 0 669 204 0 0 chr10 4281091 4281238 -141308050 + (CA)n Simple_repeat Simple_repeat 1 147 0 2601 64 0 0 chr10 4281270 4281581 -141307707 - AluY SINE Alu 0 311 1 1871 301 53 50 chr10 4281606 4282533 -141306755 + L2 LINE L2 584 1513 -1801 500 223 1 0 chr10 4282536 4282647 -141306641 - L1P1 LINE L1 -678 5477 5366 281 235 0 39 chr10 4282644 4282746 -141306542 - L1ME3 LINE L1 -955 5260 5163 * 773 200 0 0 chr10 4282754 4282881 -141306407 - FLAM_C SINE Alu -16 127 2 2228 250 51 38 chr10 4282881 4283668 -141305620 - L1ME3 LINE L1 -1034 5181 4385 3972 163 30 36 chr10 4283674 4284255 -141305033 - L1MB3 LINE L1 -3 6180 5604 1948 157 118 18 chr10 4284255 4284644 -141304644 + MSTA LTR MaLR 1 428 0 3972 163 30 36 chr10 4284644 4284933 -141304355 - L1MB3 LINE L1 -579 5604 5315 707 257 93 13 chr10 4284930 4285230 -141304058 - L1ME3 LINE L1 -2159 4056 3733 * 1611 299 48 19 chr10 4285271 4286070 -141303218 - L1ME3 LINE L1 -5381 1015 194 284 344 134 50 chr10 4286220 4286283 -141303005 - L3 LINE CR1 -30 1547 1491 2207 113 7 0 chr10 4286283 4286575 -141302713 - AluSx SINE Alu -18 294 1 284 344 134 50 chr10 4286575 4286869 -141302419 - L3 LINE CR1 -86 1491 1160 206 379 129 9 chr10 4287008 4287124 -141302164 - L2 LINE L2 -1 3271 3142 331 291 10 0 chr10 4287473 4287576 -141301712 + (TA)n Simple_repeat Simple_repeat 1 104 0 1022 163 113 0 chr10 4288126 4288347 -141300941 - L1PA16 LINE L1 0 6166 5921 2089 88 3 52 chr10 4288905 4289211 -141300077 - AluSp SINE Alu -22 291 1 24 53 0 0 chr10 4290239 4290277 -141299011 + AT_rich Low_complexity Low_complexity 1 38 0 549 150 20 0 chr10 4291029 4291129 -141298159 + MSTB LTR MaLR 1 102 -324 323 88 18 0 chr10 4291120 4291177 -141298111 + MSTB LTR MaLR 61 118 -310 * 228 79 26 0 chr10 4291287 4291325 -141297963 + MSTA LTR MaLR 76 114 -314 1640 184 35 6 chr10 4291325 4291668 -141297620 + MSTA LTR MaLR 76 428 0 239 240 13 0 chr10 4291725 4291800 -141297488 + (TCTA)n Simple_repeat Simple_repeat 1 76 0 1273 178 57 0 chr10 4291808 4292055 -141297233 - Tigger5 DNA MER2_type 0 2323 2063 1791 119 10 34 chr10 4292057 4292352 -141296936 + AluSq SINE Alu 23 310 -3 988 200 5 19 chr10 4292454 4292664 -141296624 + Tigger5 DNA MER2_type 2054 2260 -63 447 371 35 22 chr10 4294085 4294314 -141294974 + MIR SINE MIR 19 250 -12 1249 134 3 189 chr10 4294365 4294730 -141294558 + AluJb SINE Alu 1 297 -15 316 309 98 5 chr10 4296836 4296882 -141292406 + L1ME4a LINE L1 5893 5933 -188 1759 173 4 0 chr10 4296882 4297160 -141292128 + AluJb SINE Alu 1 279 -33 316 309 98 5 chr10 4297160 4297307 -141291981 + L1ME4a LINE L1 5933 6104 -17 2060 112 31 0 chr10 4298229 4298516 -141290772 - AluSq SINE Alu -10 303 8 196 211 123 0 chr10 4298640 4298697 -141290591 + MIR SINE MIR 83 146 -62 1867 188 18 13 chr10 4298754 4299142 -141290146 + MLT1B LTR MaLR 1 390 0 230 378 71 0 chr10 4299505 4299632 -141289656 + MIR3 SINE MIR 58 193 -15 1482 125 51 0 chr10 4299781 4299997 -141289291 + AluSg/x SINE Alu 72 298 -12 1166 190 112 37 chr10 4300132 4300453 -141288835 - MER7A DNA MER2_type -3 343 1 183 200 27 13 chr10 4300609 4300684 -141288604 + (TA)n Simple_repeat Simple_repeat 2 77 0 369 109 0 0 chr10 4300719 4300774 -141288514 + (TA)n Simple_repeat Simple_repeat 2 56 0 225 322 154 43 chr10 4300784 4300992 -141288296 + MIR SINE MIR 32 262 0 294 180 0 0 chr10 4301372 4301433 -141287855 + CT-rich Low_complexity Low_complexity 4 64 0 1081 60 16 28 chr10 4301449 4301631 -141287657 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1894 169 3 19 chr10 4301639 4301946 -141287342 - AluSx SINE Alu -10 302 1 288 211 0 0 chr10 4302110 4302186 -141287102 + CT-rich Low_complexity Low_complexity 1 76 0 250 235 0 29 chr10 4302216 4302239 -141287049 + MER3 DNA MER1_type 27 47 -162 575 259 52 5 chr10 4302239 4302432 -141286856 - MER3 DNA MER1_type 0 209 8 521 398 46 16 chr10 4302633 4303131 -141286157 + L3 LINE CR1 929 1441 -136 2037 128 3 0 chr10 4303225 4303533 -141285755 + AluSx SINE Alu 1 309 0 1397 183 44 24 chr10 4303867 4304204 -141285084 - MLT1C LTR MaLR 0 467 118 531 168 19 9 chr10 4304204 4304311 -141284977 - AluJb SINE Alu -13 299 192 600 142 8 90 chr10 4304311 4304445 -141284843 - MLT1C LTR MaLR -267 123 1 377 326 54 32 chr10 4304536 4304849 -141284439 + L2 LINE L2 2709 3022 -250 310 310 138 4 chr10 4304964 4305295 -141283993 + L1ME3 LINE L1 5728 6119 -45 390 130 0 0 chr10 4307021 4307090 -141282198 + MER66A LTR ERV1 410 478 0 2089 154 0 0 chr10 4307179 4307477 -141281811 - AluSx SINE Alu -14 298 1 21 0 0 0 chr10 4307522 4307543 -141281745 + AT_rich Low_complexity Low_complexity 1 21 0 2269 120 0 0 chr10 4307559 4307858 -141281430 - AluSx SINE Alu -13 299 1 772 319 107 18 chr10 4309761 4310418 -141278870 - L2 LINE L2 -298 3015 2294 637 105 11 0 chr10 4310995 4311090 -141278198 + L1PB2 LINE L1 6053 6148 -3 25 0 0 0 chr10 4311090 4311115 -141278173 + AT_rich Low_complexity Low_complexity 1 25 0 3537 172 12 10 chr10 4311569 4312260 -141277028 - L1MB7 LINE L1 -9 6175 5484 307 90 254 0 chr10 4312276 4312343 -141276945 + L1MB3 LINE L1 6081 6164 -19 2783 102 0 10 chr10 4312363 4312775 -141276513 - L1PB1 LINE L1 0 6151 5744 532 290 58 91 chr10 4313210 4313638 -141275650 + MLT1J2 LTR MaLR 32 445 -5 1220 237 56 58 chr10 4314068 4314638 -141274650 + MER34B LTR ERV1 3 585 0 353 284 60 8 chr10 4314727 4314861 -141274427 - L2 LINE L2 0 3272 3132 231 384 15 8 chr10 4317168 4317301 -141271987 - L2 LINE L2 -6 3266 3133 354 303 21 14 chr10 4317423 4317565 -141271723 + MIR SINE MIR 86 228 -34 189 292 0 15 chr10 4318039 4318104 -141271184 - MIR SINE MIR 0 262 199 237 307 13 0 chr10 4318207 4318282 -141271006 - MIR SINE MIR -82 180 105 2254 128 0 0 chr10 4319645 4319951 -141269337 + AluSx SINE Alu 1 306 -6 1201 132 57 0 chr10 4320165 4320377 -141268911 + L1MA5A LINE L1 6071 6294 -3 23 54 0 0 chr10 4320967 4321004 -141268284 + AT_rich Low_complexity Low_complexity 1 37 0 21 0 0 0 chr10 4321053 4321074 -141268214 + AT_rich Low_complexity Low_complexity 1 21 0 305 330 61 45 chr10 4321508 4321838 -141267450 + L1MC/D LINE L1 425 759 -5360 22 0 0 0 chr10 4321869 4321891 -141267397 + AT_rich Low_complexity Low_complexity 1 22 0 396 298 70 85 chr10 4321963 4322104 -141267184 + L1MC/D LINE L1 900 1042 -5077 360 64 0 0 chr10 4322104 4322151 -141267137 + (CA)n Simple_repeat Simple_repeat 1 47 0 396 298 70 85 chr10 4322151 4322338 -141266950 + L1MC/D LINE L1 1042 1223 -4896 343 316 134 20 chr10 4322473 4322869 -141266419 + L1MC/D LINE L1 2806 3246 -2883 538 121 165 0 chr10 4322870 4322961 -141266327 + AluSc SINE Alu 155 260 -49 402 361 24 33 chr10 4323085 4323415 -141265873 + L1MC/D LINE L1 4943 5269 -860 383 328 54 20 chr10 4323448 4323854 -141265434 + L1MC/D LINE L1 5311 5730 -2061 303 312 118 94 chr10 4325200 4325572 -141263716 + L1ME3A LINE L1 677 1057 -5473 2093 120 3 23 chr10 4325690 4326026 -141263262 + AluSx SINE Alu 1 312 0 323 286 5 43 chr10 4326169 4326354 -141262934 + L1ME3A LINE L1 1410 1587 -4943 230 300 38 0 chr10 4326542 4326622 -141262666 + L1ME3A LINE L1 1712 1794 -4748 321 289 117 49 chr10 4326987 4327253 -141262035 + L1ME3A LINE L1 2365 2648 -3892 342 312 76 30 chr10 4327348 4327611 -141261677 + L1ME3A LINE L1 3815 4089 -2451 604 307 63 8 chr10 4327676 4328041 -141261247 + L1ME3A LINE L1 4233 4617 -1923 367 318 90 67 chr10 4328128 4328619 -141260669 + L1ME3A LINE L1 4735 5236 -1304 843 141 33 0 chr10 4329043 4329164 -141260124 - FLAM_C SINE Alu -18 125 1 5031 163 22 9 chr10 4330099 4331078 -141258210 - L1MC1 LINE L1 -5 6328 5337 36 40 0 0 chr10 4332723 4332773 -141256515 + AT_rich Low_complexity Low_complexity 1 50 0 28 29 0 0 chr10 4333573 4333608 -141255680 + AT_rich Low_complexity Low_complexity 1 35 0 940 288 138 14 chr10 4334346 4334869 -141254419 + L1ME3A LINE L1 5969 6555 -9 285 281 104 18 chr10 4334865 4335029 -141254259 + L1ME4a LINE L1 5943 6120 -1 * 4979 245 60 31 chr10 4335665 4338708 -141250580 - L1MD2 LINE L1 -2 6617 3490 1816 287 17 4 chr10 4338718 4339412 -141249876 - L1MD2 LINE L1 -3218 3188 2486 1363 312 9 27 chr10 4339544 4339989 -141249299 - L1MD2 LINE L1 -5965 444 8 525 305 0 8 chr10 4340362 4340493 -141248795 + MER5A DNA MER1_type 1 130 -59 2433 45 3 0 chr10 4340516 4340808 -141248480 - AluY SINE Alu -18 293 1 199 329 14 0 chr10 4340835 4340908 -141248380 - L2 LINE L2 -1454 1860 1787 1905 181 57 24 chr10 4341377 4341797 -141247491 + Tigger2a DNA MER2_type 1 434 0 248 154 31 31 chr10 4342069 4342134 -141247154 + (TG)n Simple_repeat Simple_repeat 2 66 0 771 169 0 0 chr10 4342279 4342397 -141246891 - FLAM_C SINE Alu -25 118 1 212 200 50 0 chr10 4342978 4343058 -141246230 + (TA)n Simple_repeat Simple_repeat 1 84 0 22 70 0 0 chr10 4343723 4343766 -141245522 + AT_rich Low_complexity Low_complexity 1 43 0 27 49 0 0 chr10 4343978 4344019 -141245269 + AT_rich Low_complexity Low_complexity 1 41 0 180 0 0 0 chr10 4344417 4344437 -141244851 + (TTG)n Simple_repeat Simple_repeat 2 21 0 1829 128 39 7 chr10 4344439 4344594 -141244694 - AluSx SINE Alu -21 291 122 279 0 0 0 chr10 4344594 4344625 -141244663 + (TG)n Simple_repeat Simple_repeat 2 32 0 1829 128 39 7 chr10 4344625 4344751 -141244537 - AluSx SINE Alu -190 122 1 260 360 43 0 chr10 4344753 4344892 -141244396 - L2 LINE L2 -535 2779 2635 356 278 110 86 chr10 4345200 4345445 -141243843 + MIR SINE MIR 12 262 0 273 299 88 15 chr10 4348404 4348541 -141240747 - L2 LINE L2 -6 3307 3161 227 350 68 23 chr10 4348846 4349066 -141240222 - MIR SINE MIR -13 249 20 1770 170 47 19 chr10 4349503 4349868 -141239420 - THE1C LTR MaLR 0 375 1 581 124 0 0 chr10 4350365 4350462 -141238826 - L1PA15 LINE L1 -8 6157 6061 2891 253 49 31 chr10 4350569 4351722 -141237566 - L1M4 LINE L1 -2498 3648 2475 1091 255 83 85 chr10 4351782 4352531 -141236757 - L1MCb LINE L1 -5298 747 1 188 320 13 13 chr10 4353559 4353634 -141235654 + L2 LINE L2 3195 3269 -3 298 295 32 0 chr10 4354411 4354506 -141234782 - MER5A DNA MER1_type -79 110 13 438 250 52 0 chr10 4354748 4354864 -141234424 + MIR SINE MIR 111 232 -30 1538 154 33 46 chr10 4354943 4355249 -141234039 - AluJb SINE Alu -10 302 1 723 250 5 21 chr10 4355290 4355478 -141233810 - MER5A DNA MER1_type -1 188 4 231 36 0 0 chr10 4356061 4356089 -141233199 + (CCTG)n Simple_repeat Simple_repeat 1 28 0 2152 114 0 0 chr10 4356968 4357296 -141231992 + AluSx SINE Alu 4 331 0 188 310 23 11 chr10 4358047 4358134 -141231154 - L2 LINE L2 -462 2852 2765 1297 199 153 3 chr10 4359393 4359694 -141229594 + MER7A DNA MER2_type 3 346 0 631 296 151 20 chr10 4359704 4360102 -141229186 - MLT1J2 LTR MaLR 0 450 1 228 235 20 0 chr10 4360249 4360300 -141228988 + CT-rich Low_complexity Low_complexity 4 55 0 832 121 14 0 chr10 4361374 4361515 -141227773 + (GAAA)n Simple_repeat Simple_repeat 2 144 0 1942 104 7 0 chr10 4362829 4363099 -141226189 + THE1B LTR MaLR 93 364 0 1626 220 24 69 chr10 4363318 4363781 -141225507 - MLT2B1 LTR ERVL -74 446 5 2092 118 0 0 chr10 4363890 4364208 -141225080 - AluSg SINE Alu 0 318 1 33 0 0 0 chr10 4364739 4364772 -141224516 + AT_rich Low_complexity Low_complexity 1 33 0 312 312 109 18 chr10 4365403 4365679 -141223609 + L1ME2 LINE L1 4950 5250 -896 * 766 308 72 39 chr10 4365671 4366269 -141223019 + L1ME LINE L1 20 637 -5433 284 301 0 0 chr10 4366503 4366596 -141222692 + L1ME LINE L1 537 629 -5441 276 312 0 0 chr10 4366615 4366708 -141222580 + L1ME LINE L1 537 629 -5441 898 229 41 28 chr10 4366735 4367098 -141222190 + L1ME LINE L1 545 912 -5158 878 265 59 97 chr10 4367102 4367709 -141221579 + L1ME2 LINE L1 5494 6077 -87 21 36 0 0 chr10 4367779 4367807 -141221481 + AT_rich Low_complexity Low_complexity 1 28 0 1752 154 4 18 chr10 4369503 4369782 -141219506 + AluJb SINE Alu 3 277 -35 180 273 146 0 chr10 4371392 4371447 -141217841 + MIR SINE MIR 57 119 -143 351 184 23 35 chr10 4371665 4371752 -141217536 + MER89 LTR ERV1 1 86 -473 316 210 105 24 chr10 4371726 4371850 -141217438 + MER89 LTR ERV1 197 330 -229 * 1985 160 77 34 chr10 4372646 4373156 -141216132 + MLT2A2 LTR ERVL 3 554 0 1120 220 118 32 chr10 4373228 4373601 -141215687 + MER119 DNA MER1_type 176 580 -3 522 83 0 0 chr10 4375233 4375305 -141213983 + (TA)n Simple_repeat Simple_repeat 1 72 0 7285 35 3 0 chr10 4376000 4377219 -141212069 - L1PA4 LINE L1 -20 6135 4913 904 284 99 19 chr10 4378885 4379516 -141209772 - L1ME3A LINE L1 -5 6165 5453 1679 191 52 14 chr10 4382326 4382688 -141206600 - MLT1B LTR MaLR -14 376 1 2470 54 0 3 chr10 4383179 4383476 -141205812 - AluY SINE Alu -15 296 1 779 194 0 8 chr10 4384222 4384356 -141204932 + FLAM_C SINE Alu 1 133 -10 2169 102 0 10 chr10 4384370 4384665 -141204623 - AluSx SINE Alu -16 296 5 39 60 0 0 chr10 4384921 4384988 -141204300 + AT_rich Low_complexity Low_complexity 1 67 0 507 260 46 4 chr10 4385135 4385307 -141203981 + MER92A LTR ERV1 264 412 0 24 0 0 0 chr10 4387390 4387414 -141201874 + AT_rich Low_complexity Low_complexity 1 24 0 256 229 14 14 chr10 4387831 4387901 -141201387 + CT-rich Low_complexity Low_complexity 2 71 0 185 324 73 0 chr10 4388127 4388195 -141201093 - MER5A DNA MER1_type 0 189 117 22 0 0 0 chr10 4388689 4388711 -141200577 + AT_rich Low_complexity Low_complexity 1 22 0 2333 106 0 3 chr10 4389381 4389693 -141199595 + AluY SINE Alu 1 311 0 22 0 0 0 chr10 4389778 4389800 -141199488 + AT_rich Low_complexity Low_complexity 1 22 0 1089 197 10 10 chr10 4389955 4390163 -141199125 + AluJo SINE Alu 87 294 -18 1901 180 107 7 chr10 4390439 4390877 -141198411 - MER31A LTR ERV1 0 485 4 1694 194 61 16 chr10 4391139 4391749 -141197539 + MER39 LTR ERV1 2 701 -6 25 31 0 0 chr10 4393086 4393118 -141196170 + AT_rich Low_complexity Low_complexity 1 32 0 1121 216 24 0 chr10 4393579 4393833 -141195455 + MER57A LTR ERV1 1 260 -143 235 362 12 0 chr10 4394375 4394538 -141194750 + (CACTT)n Simple_repeat Simple_repeat 2 166 0 220 307 21 14 chr10 4395170 4395310 -141193978 + (CTTTA)n Simple_repeat Simple_repeat 3 143 0 244 64 21 0 chr10 4395354 4395401 -141193887 + MER57A LTR ERV1 215 262 -141 258 358 0 6 chr10 4395509 4395688 -141193600 + (CTTTA)n Simple_repeat Simple_repeat 2 179 0 244 64 21 0 chr10 4395691 4395738 -141193550 + MER57A LTR ERV1 215 262 -141 219 297 29 17 chr10 4395748 4395923 -141193365 + (CACTT)n Simple_repeat Simple_repeat 4 180 0 273 301 45 0 chr10 4398055 4398211 -141191077 - MER117 DNA MER1_type -5 192 30 1370 196 9 82 chr10 4401475 4401937 -141187351 - AluJb SINE Alu 0 438 1 197 339 161 37 chr10 4402319 4402673 -141186615 - L3 LINE CR1 -761 816 419 206 303 76 41 chr10 4403315 4403460 -141185828 + L2 LINE L2 2380 2529 -785 207 356 29 10 chr10 4406001 4406105 -141183183 + L2 LINE L2 3164 3269 -3 322 194 37 46 chr10 4406412 4406520 -141182768 + MER69 DNA AcHobo 2408 2514 -12 22 0 0 0 chr10 4406955 4406977 -141182311 + AT_rich Low_complexity Low_complexity 1 22 0 246 267 12 12 chr10 4407205 4407291 -141181997 + LTR67 LTR ERVL 459 544 -13 215 241 37 19 chr10 4407305 4407359 -141181929 - MIR3 SINE MIR -36 172 118 292 236 18 0 chr10 4407897 4408007 -141181281 + (CA)n Simple_repeat Simple_repeat 1 112 0 406 261 12 0 chr10 4408030 4408195 -141181093 + (CA)n Simple_repeat Simple_repeat 1 167 0 2650 227 24 27 chr10 4408863 4409573 -141179715 + L1MB5 LINE L1 5431 6138 -36 248 213 33 0 chr10 4411423 4411545 -141177743 + (TG)n Simple_repeat Simple_repeat 2 127 0 401 133 13 0 chr10 4411800 4411875 -141177413 + GA-rich Low_complexity Low_complexity 3 78 0 2264 107 0 0 chr10 4412831 4413120 -141176168 - AluSq SINE Alu -24 289 1 198 143 0 0 chr10 4413249 4413284 -141176004 + (TG)n Simple_repeat Simple_repeat 2 36 0 330 289 0 11 chr10 4413287 4413377 -141175911 + L1MC4 LINE L1 6614 6702 -1340 209 186 35 12 chr10 4413481 4413567 -141175721 + (TA)n Simple_repeat Simple_repeat 2 89 0 271 198 23 47 chr10 4414118 4414204 -141175084 - L1MEc LINE L1 -6274 122 39 2425 51 7 0 chr10 4415628 4415923 -141173365 + AluY SINE Alu 1 297 -14 1025 222 100 14 chr10 4416543 4416898 -141172390 - MLT1C LTR MaLR 0 467 81 906 83 0 0 chr10 4416898 4417019 -141172269 + L1PA13 LINE L1 6030 6150 -13 953 203 0 0 chr10 4417029 4417192 -141172096 + FRAM SINE Alu 1 160 -16 256 234 39 0 chr10 4417246 4417323 -141171965 - MLT1C LTR MaLR -387 80 1 188 352 159 27 chr10 4417677 4418049 -141171239 + L2 LINE L2 2319 2739 -575 1193 191 88 27 chr10 4418159 4418489 -141170799 - MLT1A1 LTR MaLR 0 365 16 256 335 113 38 chr10 4418647 4418886 -141170402 + L2 LINE L2 3003 3259 -54 1080 246 85 79 chr10 4421393 4422003 -141167285 - MLT1E2 LTR MaLR -2 624 9 1674 194 10 0 chr10 4422007 4422301 -141166987 + AluJo SINE Alu 1 297 -15 3149 167 87 22 chr10 4422430 4423108 -141166180 - MER72 LTR ERV1 0 722 1 21 57 0 0 chr10 4423723 4423758 -141165530 + AT_rich Low_complexity Low_complexity 1 35 0 2336 103 0 3 chr10 4424327 4424639 -141164649 - AluSq SINE Alu -2 311 1 3241 238 103 15 chr10 4425549 4426756 -141162532 + Charlie1 DNA MER1_type 1449 2761 0 33 0 0 0 chr10 4427990 4428023 -141161265 + AT_rich Low_complexity Low_complexity 1 33 0 265 230 0 23 chr10 4428314 4428401 -141160887 + (CATA)n Simple_repeat Simple_repeat 4 88 0 184 206 15 132 chr10 4428411 4428479 -141160809 + MIR SINE MIR 89 148 -60 1619 197 13 7 chr10 4428483 4428783 -141160505 + AluJo SINE Alu 1 302 -10 189 213 0 0 chr10 4429093 4429140 -141160148 + GA-rich Low_complexity Low_complexity 1 47 0 213 146 24 0 chr10 4430401 4430442 -141158846 + A-rich Low_complexity Low_complexity 1 42 0 24 0 0 0 chr10 4431157 4431181 -141158107 + AT_rich Low_complexity Low_complexity 1 24 0 22 0 0 0 chr10 4431458 4431480 -141157808 + AT_rich Low_complexity Low_complexity 1 22 0 427 279 19 25 chr10 4431540 4431698 -141157590 - L1MD3 LINE L1 -137 7858 7702 1499 28 0 11 chr10 4431725 4431907 -141157381 + L1PA3 LINE L1 5976 6155 0 3338 257 57 51 chr10 4432005 4432349 -141156939 - L1MB7 LINE L1 0 6184 5844 1827 149 0 17 chr10 4432349 4432650 -141156638 - AluJo SINE Alu -16 296 1 3338 257 57 51 chr10 4432650 4435064 -141154224 - L1MB7 LINE L1 -340 5844 3446 1686 166 3 21 chr10 4435064 4435383 -141153905 + AluJb SINE Alu 1 314 0 3338 257 57 51 chr10 4435383 4436266 -141153022 - L1MB7 LINE L1 -2738 3446 3786 2060 144 32 16 chr10 4436266 4436635 -141152653 + THE1C LTR MaLR 1 375 0 3338 257 57 51 chr10 4436635 4437001 -141152287 - L1MB7 LINE L1 -2397 3787 3425 6032 249 44 50 chr10 4437116 4439763 -141149525 + L1M4 LINE L1 2467 5098 -1048 404 238 10 0 chr10 4439811 4439912 -141149376 + L1MC1 LINE L1 6232 6333 0 2227 102 0 0 chr10 4439935 4440229 -141149059 - AluSc SINE Alu -15 294 1 1894 144 30 7 chr10 4440458 4440757 -141148531 + AluSx SINE Alu 1 306 -6 358 274 108 0 chr10 4441100 4441257 -141148031 + MIR SINE MIR 89 262 0 954 231 158 7 chr10 4441532 4441830 -141147458 + MER2 DNA MER2_type 1 343 -1 2613 259 41 18 chr10 4441854 4442314 -141146974 - L1MC4 LINE L1 0 8042 7553 782 187 42 61 chr10 4442314 4442528 -141146760 + MER6B DNA MER2_type 1 210 0 2613 259 41 18 chr10 4442528 4442904 -141146384 - L1MC4 LINE L1 -489 7553 7187 2316 160 42 7 chr10 4443548 4443955 -141145333 + MSTB LTR MaLR 6 426 0 620 313 27 30 chr10 4448609 4448871 -141140417 - MIR SINE MIR 0 262 2 6778 160 51 24 chr10 4449670 4450970 -141138318 - Tigger1 DNA MER2_type 0 2418 1084 2323 164 32 50 chr10 4450976 4451475 -141137813 - Tigger1 DNA MER2_type -1928 490 1 208 285 159 46 chr10 4452408 4452559 -141136729 + L3 LINE CR1 280 447 -1130 352 255 150 13 chr10 4452616 4452769 -141136519 - L2 LINE L2 -12 3301 3128 476 266 94 47 chr10 4453521 4453818 -141135470 - MLT1J LTR MaLR -7 504 194 589 273 78 7 chr10 4455237 4455545 -141133743 - L1MB7 LINE L1 -2951 3195 2866 5420 80 11 23 chr10 4455550 4456335 -141132953 + L1PA8A LINE L1 5355 6130 -1 239 300 6 38 chr10 4456344 4456504 -141132784 - L1MB7 LINE L1 -3273 2873 2719 28 61 0 0 chr10 4456591 4456640 -141132648 + AT_rich Low_complexity Low_complexity 1 49 0 354 123 0 0 chr10 4457291 4457348 -141131940 + (CA)n Simple_repeat Simple_repeat 2 58 0 203 248 9 0 chr10 4457380 4457485 -141131803 + (TA)n Simple_repeat Simple_repeat 1 106 0 243 0 0 0 chr10 4457486 4457513 -141131775 + (CA)n Simple_repeat Simple_repeat 2 28 0 2126 125 3 0 chr10 4458354 4458650 -141130638 + AluSp SINE Alu 1 297 -16 486 47 94 0 chr10 4458650 4458778 -141130510 + (TA)n Simple_repeat Simple_repeat 1 140 0 444 313 98 9 chr10 4459524 4459748 -141129540 + MIR SINE MIR 18 261 -1 216 0 0 0 chr10 4460048 4460072 -141129216 + (A)n Simple_repeat Simple_repeat 1 24 0 270 0 0 0 chr10 4462590 4462620 -141126668 + (CA)n Simple_repeat Simple_repeat 2 31 0 3447 158 39 2 chr10 4463404 4464016 -141125272 - MER41B LTR ERV1 0 635 1 224 329 61 0 chr10 4464050 4464132 -141125156 + L2 LINE L2 3209 3295 -18 1565 189 0 0 chr10 4464269 4464534 -141124754 + MLT1A1 LTR MaLR 101 365 0 306 0 0 0 chr10 4464850 4464884 -141124404 + (CA)n Simple_repeat Simple_repeat 1 34 0 398 94 16 0 chr10 4465086 4465150 -141124138 + (TTCC)n Simple_repeat Simple_repeat 3 67 0 3407 154 48 9 chr10 4467655 4468286 -141121002 - L1PA15 LINE L1 -7 6158 5504 2197 112 3 0 chr10 4468743 4469047 -141120241 - AluSx SINE Alu -7 305 1 261 318 91 0 chr10 4469269 4469379 -141119909 + L2 LINE L2 2939 3058 -214 207 224 0 86 chr10 4469935 4470051 -141119237 + A-rich Low_complexity Low_complexity 2 107 0 208 153 25 76 chr10 4470503 4470660 -141118628 + (TA)n Simple_repeat Simple_repeat 1 149 0 255 323 42 37 chr10 4471600 4471789 -141117499 - L2 LINE L2 0 3313 3124 794 235 46 28 chr10 4471815 4472032 -141117256 - MER58A DNA MER1_type -2 222 2 492 359 38 23 chr10 4472076 4472338 -141116950 - L2 LINE L2 -244 3069 2804 264 275 44 0 chr10 4472751 4472842 -141116446 - L1MEc LINE L1 -3730 2485 2391 4995 165 32 5 chr10 4472855 4473872 -141115416 - L1PA16 LINE L1 -9 6157 5116 592 260 34 15 chr10 4473906 4474171 -141115117 - L1MEc LINE L1 -3992 2404 2135 403 263 60 18 chr10 4474331 4474548 -141114740 - L1MEc LINE L1 -5320 1076 851 1087 140 5 37 chr10 4525443 4525657 -141063631 + AluSp SINE Alu 1 207 -106 21 0 0 0 chr10 4525765 4525786 -141063502 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr10 4526701 4526727 -141062561 + AT_rich Low_complexity Low_complexity 1 26 0 1444 153 0 47 chr10 4527175 4527486 -141061802 + AluJb SINE Alu 22 319 0 687 39 39 0 chr10 4527596 4527698 -141061590 + (TAGA)n Simple_repeat Simple_repeat 4 109 0 429 261 72 83 chr10 4527707 4527931 -141061357 + L1MEc LINE L1 1925 2150 -4246 919 293 35 60 chr10 4527931 4528331 -141060957 - MLT1B LTR MaLR 0 390 1 429 261 72 83 chr10 4528331 4528565 -141060723 + L1MEc LINE L1 2150 2378 -4018 707 181 8 8 chr10 4528688 4528815 -141060473 - AluSq/x SINE Alu -184 129 3 1487 125 23 0 chr10 4528908 4529124 -141060164 + L1PA13 LINE L1 5939 6159 -4 21 0 0 0 chr10 4530760 4530781 -141058507 + AT_rich Low_complexity Low_complexity 1 21 0 396 0 0 0 chr10 4530817 4530861 -141058427 + (TAGA)n Simple_repeat Simple_repeat 1 44 0 210 313 56 49 chr10 4534527 4534671 -141054617 - MIR SINE MIR -21 241 97 257 256 13 13 chr10 4534824 4534902 -141054386 + MIR SINE MIR 184 261 -1 372 240 16 33 chr10 4535440 4535561 -141053727 - L1MC4a LINE L1 -1875 5933 5815 216 234 0 0 chr10 4535593 4535640 -141053648 - L2 LINE L2 -4 3309 3263 503 203 105 28 chr10 4535959 4536102 -141053186 + MER50 LTR ERV1 10 163 -571 1176 127 35 119 chr10 4536802 4537172 -141052116 + THE1C LTR MaLR 37 375 0 3578 156 9 9 chr10 4538393 4539222 -141050066 + L1PA13 LINE L1 5053 5882 -281 233 296 12 12 chr10 4540198 4540279 -141049009 + CT-rich Low_complexity Low_complexity 1 81 0 414 0 0 0 chr10 4540281 4540327 -141048961 + (CA)n Simple_repeat Simple_repeat 2 47 0 242 353 69 40 chr10 4540639 4540812 -141048476 - L2 LINE L2 -1408 1906 1729 207 100 0 0 chr10 4541790 4541820 -141047468 + (TG)n Simple_repeat Simple_repeat 2 31 0 638 138 88 6 chr10 4541936 4542096 -141047192 + L1MCa LINE L1 2280 2452 -3974 * 2747 166 27 27 chr10 4542093 4542621 -141046667 + L1MC1 LINE L1 5787 6317 -16 2445 55 0 21 chr10 4542621 4542936 -141046352 + L1PA8 LINE L1 5851 6169 -3 2747 166 27 27 chr10 4542936 4542954 -141046334 + L1MC1 LINE L1 6316 6333 0 36 23 0 0 chr10 4543219 4543262 -141046026 + AT_rich Low_complexity Low_complexity 1 43 0 2247 115 0 0 chr10 4543738 4544034 -141045254 - AluSq SINE Alu -17 296 1 1780 109 15 40 chr10 4544750 4545047 -141044241 + AluSq SINE Alu 47 336 0 2197 225 79 63 chr10 4545338 4546173 -141043115 - L1ME2 LINE L1 -34 6130 5283 2111 81 14 3 chr10 4546252 4546548 -141042740 - L1PA8 LINE L1 -5 6167 5869 1738 65 4 0 chr10 4546548 4546777 -141042511 + L1PA8 LINE L1 5648 5877 -295 210 80 60 20 chr10 4546795 4546845 -141042443 + (TA)n Simple_repeat Simple_repeat 1 52 0 600 276 123 78 chr10 4546855 4548814 -141040474 - L1ME LINE L1 -3550 2832 796 1347 247 7 3 chr10 4548887 4549170 -141040118 - AluJo SINE Alu -22 290 7 328 348 70 43 chr10 4549947 4550177 -141039111 - MIR SINE MIR -3 259 24 25 0 0 0 chr10 4551291 4551316 -141037972 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr10 4551703 4551732 -141037556 + AT_rich Low_complexity Low_complexity 1 29 0 24 0 0 0 chr10 4552894 4552918 -141036370 + AT_rich Low_complexity Low_complexity 1 24 0 962 216 96 45 chr10 4553280 4553308 -141035980 + Charlie2 DNA MER1_type 2307 2332 -530 2219 119 12 3 chr10 4553308 4553651 -141035637 + L1PB1 LINE L1 5806 6151 0 962 216 96 45 chr10 4553651 4554070 -141035218 + Charlie2 DNA MER1_type 2332 2777 -85 1013 220 110 38 chr10 4554501 4554928 -141034360 - MLT1C LTR MaLR -4 463 6 406 242 37 58 chr10 4555992 4556182 -141033106 + Charlie2 DNA MER1_type 2596 2781 -81 655 176 25 17 chr10 4557067 4557186 -141032102 + FLAM_C SINE Alu 2 121 -12 1061 159 0 17 chr10 4557278 4557454 -141031834 + FRAM SINE Alu 4 176 0 406 318 38 30 chr10 4558905 4559141 -141030147 + MIR SINE MIR 24 261 -1 1728 156 0 73 chr10 4559591 4559905 -141029383 + AluJb SINE Alu 1 291 -21 395 16 62 0 chr10 4559905 4559969 -141029319 + (TA)n Simple_repeat Simple_repeat 2 69 0 317 277 39 0 chr10 4559983 4560113 -141029175 + L1ME4a LINE L1 5751 5885 -236 267 224 20 20 chr10 4560142 4560289 -141028999 + GA-rich Low_complexity Low_complexity 2 148 0 1853 93 0 19 chr10 4562253 4562522 -141026766 - L1PA8 LINE L1 -2 6170 5907 243 0 0 0 chr10 4562638 4562665 -141026623 + (CA)n Simple_repeat Simple_repeat 1 27 0 2233 86 0 20 chr10 4562829 4563131 -141026157 + AluY SINE Alu 1 296 -15 712 181 12 0 chr10 4563721 4563892 -141025396 + GA-rich Low_complexity Low_complexity 4 176 0 261 0 0 0 chr10 4563970 4563999 -141025289 + (TG)n Simple_repeat Simple_repeat 1 29 0 1986 110 0 7 chr10 4564197 4564534 -141024754 - AluSc SINE Alu 0 335 1 284 291 101 34 chr10 4564896 4565075 -141024213 - LTR33 LTR ERVL -78 443 253 294 299 162 25 chr10 4565083 4565367 -141023921 - ERVL LTR ERVL -865 4899 4577 402 254 134 69 chr10 4565475 4565707 -141023581 - MLT1H LTR MaLR -197 352 106 377 264 110 61 chr10 4565763 4566117 -141023171 - L1M4 LINE L1 -2486 3660 3280 2124 122 3 0 chr10 4566117 4566411 -141022877 - AluSx SINE Alu -17 295 1 377 264 110 61 chr10 4566411 4566484 -141022804 - L1M4 LINE L1 -2866 3280 3212 594 313 37 49 chr10 4566636 4566962 -141022326 + L3 LINE CR1 1139 1460 -117 4330 233 57 27 chr10 4566985 4568346 -141020942 + Charlie1a DNA MER1_type 39 1439 -16 201 337 22 11 chr10 4569427 4569519 -141019769 - L2 LINE L2 -1 3271 3179 369 189 82 61 chr10 4570352 4570548 -141018740 + Charlie1 DNA MER1_type 2471 2670 -91 * 773 192 87 9 chr10 4570542 4570771 -141018517 + Charlie5 DNA MER1_type 2330 2576 -36 2639 179 12 0 chr10 4570873 4571364 -141017924 + LOR1a LTR ERV1 1 497 0 22 88 0 0 chr10 4571896 4571953 -141017335 + AT_rich Low_complexity Low_complexity 1 57 0 37 39 0 0 chr10 4572111 4572162 -141017126 + AT_rich Low_complexity Low_complexity 1 51 0 484 291 91 25 chr10 4574601 4574918 -141014370 + L1ME LINE L1 5317 5661 -460 183 114 0 0 chr10 4576133 4576168 -141013120 + (TTCA)n Simple_repeat Simple_repeat 1 35 0 2555 162 36 0 chr10 4577312 4577757 -141011531 + LOR1b LTR ERV1 1 461 0 311 316 0 38 chr10 4579611 4579690 -141009598 - MIR SINE MIR -178 84 9 2291 144 58 16 chr10 4582510 4582940 -141006348 + L1PB3 LINE L1 5707 6154 0 44 20 0 0 chr10 4584048 4584099 -141005189 + AT_rich Low_complexity Low_complexity 1 51 0 367 189 38 13 chr10 4584560 4584719 -141004569 + (TA)n Simple_repeat Simple_repeat 1 163 0 1249 220 55 52 chr10 4584729 4585092 -141004196 - MLT2D LTR ERVL -40 374 11 827 210 66 0 chr10 4586015 4586196 -141003092 - LTR26 LTR ERV1 0 603 411 917 293 52 12 chr10 4586418 4586746 -141002542 - MER45C DNA AcHobo -611 342 2 180 351 108 0 chr10 4588169 4588243 -141001045 + MIR SINE MIR 64 145 -63 1793 180 91 29 chr10 4589309 4589726 -140999562 - MSTB2 LTR MaLR 0 457 15 1547 93 23 0 chr10 4593003 4593219 -140996069 - L1PA13 LINE L1 -4 6159 5939 2174 128 0 6 chr10 4593310 4593622 -140995666 + AluSx SINE Alu 1 310 -2 207 191 0 0 chr10 4593628 4593675 -140995613 + A-rich Low_complexity Low_complexity 1 47 0 374 238 115 46 chr10 4593793 4594054 -140995234 - L1MC5 LINE L1 -51 7910 7632 1248 79 0 0 chr10 4594056 4594208 -140995080 + AluSp/q SINE Alu 154 305 -8 2375 101 3 0 chr10 4595343 4595651 -140993637 + AluSp SINE Alu 1 309 -4 22 35 0 0 chr10 4596251 4596280 -140993008 + AT_rich Low_complexity Low_complexity 1 29 0 943 234 49 19 chr10 4596289 4596663 -140992625 - L1ME1 LINE L1 -19 6643 6238 641 269 92 8 chr10 4596659 4596897 -140992391 - L1ME1 LINE L1 -1221 5423 5166 * 1326 271 42 17 chr10 4596880 4597475 -140991813 - L1ME1 LINE L1 -2890 3754 3145 3000 258 45 45 chr10 4597485 4598542 -140990746 - L1ME1 LINE L1 -5458 1084 29 794 243 42 58 chr10 4598556 4598934 -140990354 - L1M4 LINE L1 -1377 4769 4398 26 0 0 0 chr10 4598940 4598966 -140990322 + AT_rich Low_complexity Low_complexity 1 26 0 669 165 177 0 chr10 4598967 4599125 -140990163 - L1MA8 LINE L1 -3 6288 6103 * 3347 160 29 7 chr10 4599123 4600178 -140989110 - L1MA8 LINE L1 -429 5883 4813 500 245 76 81 chr10 4600168 4600402 -140988886 - L1MDa LINE L1 -3890 2650 2417 * 1004 283 32 58 chr10 4600402 4600802 -140988486 + MLT1B LTR MaLR 1 390 0 500 245 76 81 chr10 4600802 4601035 -140988253 - L1MDa LINE L1 -4123 2417 2185 687 39 39 0 chr10 4601035 4601137 -140988151 + (TCTA)n Simple_repeat Simple_repeat 4 109 0 500 245 76 81 chr10 4601137 4601247 -140988041 - L1MDa LINE L1 -4355 2185 2076 1681 147 0 41 chr10 4601247 4601576 -140987712 - AluJb SINE Alu 0 319 3 500 245 76 81 chr10 4601576 4601727 -140987561 - L1MDa LINE L1 -4464 2076 1929 222 91 0 0 chr10 4602152 4602185 -140987103 + (TATG)n Simple_repeat Simple_repeat 3 35 0 23 0 0 0 chr10 4602386 4602409 -140986879 + AT_rich Low_complexity Low_complexity 1 23 0 381 205 0 12 chr10 4603855 4603938 -140985350 + HERVL LTR ERVL 4521 4602 -1052 1891 179 61 47 chr10 4603939 4604363 -140984925 - MSTB1 LTR MaLR 0 432 3 896 265 105 41 chr10 4604372 4604672 -140984616 + HERVL LTR ERVL 4643 4971 -793 975 244 55 88 chr10 4604672 4605057 -140984231 - MLT1A2 LTR MaLR -2 372 1 896 265 105 41 chr10 4605057 4605118 -140984170 + HERVL LTR ERVL 4971 5027 -737 2054 135 0 0 chr10 4605547 4605829 -140983459 + AluSc SINE Alu 1 282 -27 198 0 0 0 chr10 4605829 4605851 -140983437 + (TA)n Simple_repeat Simple_repeat 2 23 0 36 40 0 0 chr10 4605909 4605959 -140983329 + AT_rich Low_complexity Low_complexity 1 50 0 1006 250 14 0 chr10 4606234 4606446 -140982842 + MER58A DNA MER1_type 2 216 -8 286 132 15 29 chr10 4606606 4606674 -140982614 + CT-rich Low_complexity Low_complexity 4 70 0 598 234 140 27 chr10 4606797 4607054 -140982234 - L1M4 LINE L1 -3428 2718 2433 346 281 22 15 chr10 4607465 4607600 -140981688 + MIR SINE MIR 65 200 -62 1849 155 13 26 chr10 4607980 4608289 -140980999 - AluSx SINE Alu -6 306 2 24 0 0 0 chr10 4608410 4608434 -140980854 + AT_rich Low_complexity Low_complexity 1 24 0 2128 120 3 0 chr10 4608815 4609115 -140980173 + AluSx SINE Alu 1 301 -11 215 281 53 0 chr10 4609254 4609311 -140979977 + MIR SINE MIR 25 84 -178 2478 86 0 9 chr10 4609738 4610053 -140979235 + AluSq SINE Alu 2 313 0 272 222 9 0 chr10 4610862 4610970 -140978318 + (TG)n Simple_repeat Simple_repeat 1 109 0 396 271 0 0 chr10 4611005 4611175 -140978113 + (TG)n Simple_repeat Simple_repeat 2 171 0 1887 132 184 8 chr10 4611230 4611594 -140977694 - MSTA LTR MaLR 0 428 1 2270 89 0 0 chr10 4611772 4612076 -140977212 + AluY SINE Alu 1 304 0 200 303 26 0 chr10 4613449 4613525 -140975763 + MIR SINE MIR 184 261 -1 2317 107 0 0 chr10 4614652 4614943 -140974345 - AluSg SINE Alu -19 291 1 4008 210 35 79 chr10 4617072 4617185 -140972103 + L1MC/D LINE L1 4054 4170 -2028 2351 105 0 0 chr10 4617185 4617489 -140971799 + AluSg SINE Alu 1 304 -6 4008 210 35 79 chr10 4617489 4618486 -140970802 + L1MC/D LINE L1 4170 5073 -1125 1338 115 5 0 chr10 4618486 4618686 -140970602 - L1PB2 LINE L1 -2 6149 5949 4008 210 35 79 chr10 4618686 4619053 -140970235 + L1MC/D LINE L1 5073 5455 -743 208 283 75 17 chr10 4619284 4619404 -140969884 + L2 LINE L2 3146 3272 0 37 0 0 0 chr10 4620617 4620654 -140968634 + GC_rich Low_complexity Low_complexity 1 37 0 182 296 91 0 chr10 4621128 4621216 -140968072 - L2 LINE L2 -914 2400 2305 278 316 0 13 chr10 4621318 4621394 -140967894 + MER119 DNA MER1_type 2 76 -507 1165 172 39 19 chr10 4621397 4621653 -140967635 + L1ME3A LINE L1 5357 5617 -561 758 227 35 10 chr10 4622376 4622574 -140966714 - L1MA6 LINE L1 -155 6145 5943 258 207 2 32 chr10 4622780 4622843 -140966445 - MIR SINE MIR -87 121 59 214 330 35 26 chr10 4623253 4623368 -140965920 - MIR SINE MIR -56 152 37 991 134 0 0 chr10 4623924 4624066 -140965222 + AluSg/x SINE Alu 166 307 -5 2334 105 0 0 chr10 4625297 4625591 -140963697 + AluSg SINE Alu 1 294 -16 4627 134 89 66 chr10 4626658 4628100 -140961188 + pTR5 LTR ERV1 66 2438 0 194 297 195 0 chr10 4628786 4628904 -140960384 - MIR SINE MIR -17 245 105 254 314 57 0 chr10 4629231 4629336 -140959952 + MLT1J1 LTR MaLR 1 111 -335 402 261 137 12 chr10 4629346 4629507 -140959781 + MLT1J2 LTR MaLR 156 336 -114 233 222 269 19 chr10 4630447 4630555 -140958733 - L1ME4a LINE L1 0 6121 5987 182 328 0 0 chr10 4630889 4630947 -140958341 - L2 LINE L2 0 3272 3215 395 332 156 17 chr10 4631196 4631548 -140957740 - L2 LINE L2 -42 3230 2830 209 321 138 0 chr10 4631809 4631918 -140957370 - L2 LINE L2 -793 2521 2398 648 294 66 45 chr10 4632641 4632930 -140956358 + L2 LINE L2 3019 3313 0 394 264 40 34 chr10 4633444 4633592 -140955696 + L1ME3A LINE L1 5995 6143 -27 655 233 87 36 chr10 4633646 4633865 -140955423 + L1ME3A LINE L1 5707 5936 -234 343 231 154 15 chr10 4633909 4634039 -140955249 + L1ME3A LINE L1 6020 6167 -3 28 0 0 0 chr10 4636046 4636074 -140953214 + AT_rich Low_complexity Low_complexity 1 28 0 221 0 35 0 chr10 4636491 4636520 -140952768 + (CAAAA)n Simple_repeat Simple_repeat 2 31 0 226 240 144 89 chr10 4636525 4636671 -140952617 + MIR3 SINE MIR 39 192 -16 523 288 0 0 chr10 4637478 4637610 -140951678 + MIR SINE MIR 103 234 -28 228 258 148 13 chr10 4638445 4638600 -140950688 - MIR3 SINE MIR -16 192 17 234 105 0 0 chr10 4639375 4639413 -140949875 + (TAAAG)n Simple_repeat Simple_repeat 2 39 0 244 309 74 19 chr10 4639868 4640027 -140949261 - MIR3 SINE MIR -25 183 8 2520 121 3 3 chr10 4640454 4640818 -140948470 + THE1B LTR MaLR 1 364 0 344 247 37 0 chr10 4640887 4640968 -140948320 - MER5A DNA MER1_type -68 121 38 225 268 71 0 chr10 4640993 4641049 -140948239 + L2 LINE L2 3162 3221 -51 230 277 84 12 chr10 4642069 4642152 -140947136 - MIR SINE MIR -70 192 104 456 287 124 40 chr10 4642185 4643601 -140945687 + L1M4 LINE L1 3095 4677 -1469 261 216 0 0 chr10 4643611 4643662 -140945626 + L1ME2 LINE L1 6072 6122 -42 190 373 56 32 chr10 4644294 4644420 -140944868 - L2 LINE L2 -5 3267 3139 1089 184 20 110 chr10 4644587 4644949 -140944339 + L1MA7 LINE L1 5937 6277 -14 1871 144 7 0 chr10 4645038 4645344 -140943944 - AluJo SINE Alu -4 308 1 274 238 16 16 chr10 4645923 4645986 -140943302 - L2 LINE L2 -9 3263 3201 1937 132 0 0 chr10 4646000 4646273 -140943015 + AluSx SINE Alu 39 311 -1 1178 260 122 10 chr10 4646868 4647273 -140942015 + L1MC/D LINE L1 3742 4213 -1933 282 29 0 0 chr10 4647273 4647308 -140941980 + (CAAAA)n Simple_repeat Simple_repeat 2 36 0 1178 260 122 10 chr10 4647308 4647395 -140941893 + L1MC/D LINE L1 4213 4289 -1857 2411 86 0 0 chr10 4647422 4647723 -140941565 + AluSc SINE Alu 3 303 -6 1397 193 45 0 chr10 4647726 4647990 -140941298 + AluJo SINE Alu 1 276 -36 288 0 0 0 chr10 4648000 4648032 -140941256 + (TAAA)n Simple_repeat Simple_repeat 3 34 0 2796 239 51 22 chr10 4648032 4648739 -140940549 + L1MC/D LINE L1 4321 5071 -1249 5223 82 1 0 chr10 4648739 4649432 -140939856 - L1PA8A LINE L1 -12 6119 5426 2796 239 51 22 chr10 4649432 4649952 -140939336 + L1MC/D LINE L1 5071 5575 -745 321 89 0 0 chr10 4652966 4653011 -140936277 + (CA)n Simple_repeat Simple_repeat 2 46 0 23 0 0 0 chr10 4653180 4653203 -140936085 + AT_rich Low_complexity Low_complexity 1 23 0 1321 262 104 33 chr10 4653793 4654426 -140934862 - MER20B DNA MER1_type -59 724 47 333 320 31 73 chr10 4654536 4654989 -140934299 + L2 LINE L2 1983 2416 -898 250 286 112 51 chr10 4655431 4655609 -140933679 + MLT1J LTR MaLR 1 189 -322 585 211 0 0 chr10 4655609 4655742 -140933546 + (TG)n Simple_repeat Simple_repeat 1 133 0 845 246 67 56 chr10 4655874 4656245 -140933043 + Charlie4a DNA MER1_type 43 421 -1540 1552 154 75 27 chr10 4656245 4656537 -140932751 - AluJo SINE Alu -6 306 1 845 246 67 56 chr10 4656537 4656595 -140932693 + Charlie4a DNA MER1_type 421 477 -31 702 251 6 6 chr10 4656788 4656951 -140932337 + MLT1C LTR MaLR 305 467 0 2203 238 45 52 chr10 4656955 4657781 -140931507 + MLT1C-int LTR MaLR 5 884 -487 1019 226 37 140 chr10 4657907 4658452 -140930836 + MLT1C-int LTR MaLR 944 1370 -1 411 185 70 135 chr10 4658459 4658659 -140930629 + MLT1C LTR MaLR 7 193 -197 342 259 68 68 chr10 4658798 4658941 -140930347 + MLT1K LTR MaLR 328 473 -115 13979 82 11 1 chr10 4658941 4661636 -140927652 + L1PA7 LINE L1 3440 6154 0 342 259 68 68 chr10 4661636 4661712 -140927576 + MLT1K LTR MaLR 472 547 -41 194 336 40 24 chr10 4661895 4662020 -140927268 - MIR3 SINE MIR -43 165 39 922 9 0 0 chr10 4662275 4662380 -140926908 + L1PA3 LINE L1 6050 6154 -1 207 204 0 0 chr10 4662394 4662438 -140926850 + A-rich Low_complexity Low_complexity 1 44 0 423 273 239 14 chr10 4662465 4662754 -140926534 - L2 LINE L2 0 3272 2919 2570 47 0 22 chr10 4663478 4663796 -140925492 + AluY SINE Alu 1 311 0 2839 206 8 2 chr10 4663940 4664468 -140924820 + MER41D LTR ERV1 1 531 -26 26 0 0 0 chr10 4664511 4664537 -140924751 + AT_rich Low_complexity Low_complexity 1 26 0 238 152 0 0 chr10 4664870 4664916 -140924372 - L1ME3 LINE L1 -7 6155 6110 2812 256 131 26 chr10 4664985 4667180 -140922108 - L1ME3 LINE L1 -197 5967 3497 315 171 103 51 chr10 4667299 4667416 -140921872 - L1ME3 LINE L1 -2863 3283 3161 522 271 29 25 chr10 4667419 4667659 -140921629 - L1ME3 LINE L1 -3090 3056 2816 258 244 24 0 chr10 4667721 4667803 -140921485 - L1ME3 LINE L1 -3227 2919 2836 2097 117 10 13 chr10 4667958 4668265 -140921023 - AluSx SINE Alu -2 310 5 21 0 0 0 chr10 4670677 4670698 -140918590 + AT_rich Low_complexity Low_complexity 1 21 0 526 255 93 32 chr10 4671214 4671461 -140917827 - MIR SINE MIR 0 262 1 196 394 0 14 chr10 4673879 4673950 -140915338 - L2 LINE L2 -86 3186 3117 341 228 196 19 chr10 4675567 4675725 -140913563 - MER5A DNA MER1_type 0 189 4 2284 210 33 48 chr10 4676937 4677569 -140911719 - L1MC3 LINE L1 -2 7783 7161 265 67 0 3 chr10 4677570 4677805 -140911483 + AluY SINE Alu 1 313 0 6691 236 74 41 chr10 4677806 4679637 -140909651 - L1MC3 LINE L1 -617 7168 5398 1976 131 40 0 chr10 4679637 4679811 -140909477 - AluSx SINE Alu -3 309 117 270 0 0 0 chr10 4679811 4679841 -140909447 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 1976 131 40 0 chr10 4679841 4679963 -140909325 - AluSx SINE Alu -195 117 1 6691 236 74 41 chr10 4679963 4680315 -140908973 - L1MC3 LINE L1 -2387 5398 5059 1236 138 20 5 chr10 4680315 4680518 -140908770 - L1PB1 LINE L1 -1 6150 5945 6691 236 74 41 chr10 4680518 4681823 -140907465 - L1MC3 LINE L1 -2726 5059 3564 964 232 34 0 chr10 4681930 4682193 -140907095 + L1MA4 LINE L1 6025 6296 -4 347 235 145 70 chr10 4682350 4682550 -140906738 - HAL1 LINE L1 -2288 219 5 269 239 128 60 chr10 4683508 4683625 -140905663 + MER69 DNA AcHobo 1 125 -2401 25 0 0 0 chr10 4685216 4685241 -140904047 + AT_rich Low_complexity Low_complexity 1 25 0 205 202 0 146 chr10 4687829 4687918 -140901370 - L2 LINE L2 -514 2800 2725 23 33 0 0 chr10 4688136 4688166 -140901122 + AT_rich Low_complexity Low_complexity 1 30 0 288 294 15 0 chr10 4688176 4688244 -140901044 - MIR3 SINE MIR -24 184 116 248 151 0 19 chr10 4688583 4688636 -140900652 + GA-rich Low_complexity Low_complexity 1 52 0 39 38 0 0 chr10 4689249 4689302 -140899986 + AT_rich Low_complexity Low_complexity 1 53 0 238 210 110 60 chr10 4690233 4690333 -140898955 + MIR3 SINE MIR 83 187 -21 674 239 54 84 chr10 4690409 4690744 -140898544 - MER46C DNA MER2_type -13 325 1 1716 189 20 3 chr10 4691156 4691506 -140897782 - MER89 LTR ERV1 -4 555 200 766 192 26 6 chr10 4691529 4691685 -140897603 - FRAM SINE Alu -17 159 1 1253 278 91 25 chr10 4692804 4693289 -140895999 - LTR40a LTR ERVL 0 519 3 278 231 0 0 chr10 4693294 4693346 -140895942 - HERVL40 LTR ERVL -35 5495 5444 276 291 110 8 chr10 4693499 4693626 -140895662 + MER58B DNA MER1_type 199 338 -3 349 102 169 0 chr10 4694146 4694205 -140895083 - MER85 DNA T2_type -66 73 5 493 291 89 11 chr10 4694207 4694386 -140894902 + HERVL40 LTR ERVL 1219 1411 -4119 420 20 0 0 chr10 4694562 4694611 -140894677 + MER85 DNA T2_type 89 137 -2 1902 138 22 38 chr10 4695837 4696159 -140893129 - L1MB3 LINE L1 -4 6179 5862 2104 109 3 0 chr10 4696159 4696452 -140892836 + AluSx SINE Alu 1 294 -18 1902 138 22 38 chr10 4696452 4696498 -140892790 - L1MB3 LINE L1 -321 5862 5817 263 48 0 48 chr10 4697737 4697779 -140891509 + (TTCC)n Simple_repeat Simple_repeat 1 40 0 204 150 33 33 chr10 4697791 4697851 -140891437 + CT-rich Low_complexity Low_complexity 4 63 0 184 30 61 0 chr10 4698076 4698109 -140891179 + T-rich Low_complexity Low_complexity 1 35 0 265 196 20 0 chr10 4698329 4698380 -140890908 - MLT1G1 LTR MaLR 0 595 544 22 35 0 0 chr10 4698648 4698677 -140890611 + AT_rich Low_complexity Low_complexity 1 29 0 21 71 0 0 chr10 4698703 4698745 -140890543 + AT_rich Low_complexity Low_complexity 1 42 0 255 257 0 0 chr10 4698772 4698873 -140890415 + (TG)n Simple_repeat Simple_repeat 1 101 0 253 340 9 28 chr10 4700496 4700602 -140888686 - MIR3 SINE MIR -10 198 95 2032 205 66 5 chr10 4700848 4701257 -140888031 - MER70A LTR ERVL 0 472 39 303 93 0 0 chr10 4701268 4701311 -140887977 + (TG)n Simple_repeat Simple_repeat 2 44 0 206 312 80 24 chr10 4703328 4703453 -140885835 - L2 LINE L2 -2 3311 3180 802 303 33 63 chr10 4704146 4704575 -140884713 + L2 LINE L2 2898 3313 0 211 333 0 0 chr10 4705297 4705360 -140883928 - L2 LINE L2 0 3272 3210 1738 188 7 0 chr10 4705944 4706253 -140883035 + AluJb SINE Alu 2 312 0 36 0 0 0 chr10 4708236 4708272 -140881016 + AT_rich Low_complexity Low_complexity 1 36 0 2541 44 0 0 chr10 4708840 4709136 -140880152 + AluY SINE Alu 2 297 -14 302 301 0 49 chr10 4709387 4709510 -140879778 - MIR SINE MIR -70 192 76 2377 126 30 13 chr10 4710188 4710584 -140878704 - MER57A LTR ERV1 0 403 1 214 273 13 39 chr10 4711711 4711788 -140877500 + MIR SINE MIR 66 140 -68 356 319 76 38 chr10 4712643 4712960 -140876328 - L1M4 LINE L1 -1627 4519 4191 1034 244 78 36 chr10 4712972 4713394 -140875894 - MLT1C LTR MaLR 0 467 17 881 164 56 119 chr10 4713424 4713693 -140875595 - MLT1C-int LTR MaLR -1 1370 1119 1375 294 83 45 chr10 4713696 4714303 -140874985 - L1ME LINE L1 -4600 1480 898 2128 133 3 0 chr10 4714303 4714611 -140874677 - AluSx SINE Alu -3 309 1 1375 294 83 45 chr10 4714611 4715427 -140873861 - L1ME LINE L1 -5182 898 6 34 42 0 0 chr10 4716258 4716306 -140872982 + AT_rich Low_complexity Low_complexity 1 48 0 390 245 109 43 chr10 4716927 4717111 -140872177 + MIR SINE MIR 53 248 -14 21 0 0 0 chr10 4717155 4717176 -140872112 + AT_rich Low_complexity Low_complexity 1 21 0 1883 242 7 4 chr10 4717710 4718629 -140870659 + L1MB7 LINE L1 5 1061 -5481 1671 249 54 7 chr10 4718663 4719104 -140870184 + MLT1C LTR MaLR 6 467 0 2835 251 95 41 chr10 4719109 4719864 -140869424 + L1MB7 LINE L1 1201 1913 -4731 1657 189 0 11 chr10 4719864 4720149 -140869139 + AluJb SINE Alu 1 282 -30 2835 251 95 41 chr10 4720149 4721811 -140867477 + L1MB7 LINE L1 1913 3749 -2895 1277 226 22 38 chr10 4721821 4722139 -140867149 + MLT1A1 LTR MaLR 11 323 -42 5464 225 69 39 chr10 4722159 4724980 -140864308 + L1MB7 LINE L1 3754 6659 -23 1276 168 5 23 chr10 4724993 4725213 -140864075 + AluSx SINE Alu 1 216 -96 945 140 0 0 chr10 4725213 4725363 -140863925 + AluSg/x SINE Alu 154 303 -9 209 368 58 32 chr10 4725664 4725819 -140863469 - MIR SINE MIR -39 223 65 1511 174 102 7 chr10 4727020 4727325 -140861963 + MER1B DNA MER1_type 3 336 -1 1970 140 0 0 chr10 4728702 4728988 -140860300 - AluSx SINE Alu -23 289 4 323 308 8 15 chr10 4729265 4729395 -140859893 + GA-rich Low_complexity Low_complexity 2 130 0 2146 122 10 0 chr10 4730413 4730709 -140858579 + AluSc SINE Alu 1 299 -10 6238 158 54 6 chr10 4731417 4732591 -140856697 + Tigger3b DNA MER2_type 1 1230 -1 271 219 16 65 chr10 4732626 4732749 -140856539 + (CATATA)n Simple_repeat Simple_repeat 2 118 0 349 236 0 50 chr10 4733293 4733475 -140855813 - L1ME4a LINE L1 -11 6110 5938 27 49 0 0 chr10 4733508 4733549 -140855739 + AT_rich Low_complexity Low_complexity 1 41 0 1106 228 114 17 chr10 4734165 4734525 -140854763 + MSTD LTR MaLR 1 395 -1 286 228 134 20 chr10 4735241 4735390 -140853898 + L1 LINE L1 4899 5064 -1082 21 0 0 0 chr10 4735712 4735733 -140853555 + AT_rich Low_complexity Low_complexity 1 21 0 26 0 0 0 chr10 4736648 4736674 -140852614 + AT_rich Low_complexity Low_complexity 1 26 0 34 79 0 0 chr10 4737096 4737172 -140852116 + AT_rich Low_complexity Low_complexity 1 76 0 201 286 0 0 chr10 4739704 4739753 -140849535 + L2 LINE L2 3139 3187 -85 585 255 104 24 chr10 4741306 4741557 -140847731 + MLT1F1 LTR MaLR 2 272 -295 2066 103 7 35 chr10 4741822 4742132 -140847156 - AluSx SINE Alu 0 312 12 1097 291 161 78 chr10 4744142 4745250 -140844038 - L2 LINE L2 -27 3286 2271 3578 130 30 17 chr10 4745250 4745852 -140843436 - MER4B LTR ERV1 0 610 1 1097 291 161 78 chr10 4745852 4746890 -140842398 - L2 LINE L2 -1042 2271 969 1709 248 108 24 chr10 4746901 4747478 -140841810 + MLT1E2 LTR MaLR 1 625 -1 219 360 23 23 chr10 4747519 4747691 -140841597 - L2 LINE L2 -2424 890 719 182 333 0 0 chr10 4748908 4748956 -140840332 + L2 LINE L2 3207 3254 -18 333 259 36 9 chr10 4750986 4751098 -140838190 - MIR3 SINE MIR -5 203 89 244 234 75 56 chr10 4751529 4751636 -140837652 + HAL1 LINE L1 1914 2022 -485 1824 291 128 39 chr10 4751716 4752924 -140836364 - L2 LINE L2 -365 2949 1635 306 290 155 27 chr10 4753315 4753650 -140835638 + HAL1 LINE L1 2066 2443 -64 207 167 0 0 chr10 4754376 4754418 -140834870 + T-rich Low_complexity Low_complexity 1 42 0 180 0 0 0 chr10 4754738 4754758 -140834530 + (T)n Simple_repeat Simple_repeat 1 20 0 246 190 13 25 chr10 4755082 4755161 -140834127 + (TA)n Simple_repeat Simple_repeat 2 79 0 1043 166 6 0 chr10 4755750 4755925 -140833363 - L1PB3 LINE L1 -11 6143 5968 181 354 10 21 chr10 4756416 4756512 -140832776 + L2 LINE L2 3141 3235 -37 2026 167 12 19 chr10 4756548 4757062 -140832226 + MER39B LTR ERV1 1 603 -50 950 156 182 36 chr10 4757062 4757354 -140831934 - MER61C LTR ERV1 0 434 1 400 315 105 55 chr10 4757456 4758041 -140831247 - L1 LINE L1 -1980 4370 3751 29 28 0 0 chr10 4759974 4760010 -140829278 + AT_rich Low_complexity Low_complexity 1 36 0 1311 102 0 0 chr10 4760475 4760677 -140828611 - AluSg/x SINE Alu 0 318 117 232 152 121 15 chr10 4761136 4761202 -140828086 - MIR SINE MIR -33 229 157 204 355 16 32 chr10 4763183 4763307 -140825981 - MIR SINE MIR -112 150 29 2366 116 16 13 chr10 4763415 4763787 -140825501 + THE1C LTR MaLR 3 375 0 381 158 0 0 chr10 4768324 4768406 -140820882 + GA-rich Low_complexity Low_complexity 2 83 0 23 0 0 0 chr10 4769396 4769419 -140819869 + AT_rich Low_complexity Low_complexity 1 23 0 3727 143 40 22 chr10 4769421 4770141 -140819147 - L1MA7 LINE L1 -3 6288 5556 2821 293 52 52 chr10 4770149 4771559 -140817729 - L1 LINE L1 -4870 1411 1 1392 257 84 53 chr10 4772983 4774103 -140815185 + L1MB7 LINE L1 2 1334 -5208 1238 219 23 23 chr10 4774106 4774408 -140814880 + MER21B-int LTR ERV1 3848 4149 -42 3334 236 47 20 chr10 4774483 4775313 -140813975 + MER21B LTR ERV1 1 852 -11 2063 236 36 51 chr10 4775322 4776103 -140813185 + L1MB7 LINE L1 1325 2093 -4553 258 32 0 0 chr10 4776134 4776165 -140813123 + (TG)n Simple_repeat Simple_repeat 2 32 0 192 77 0 0 chr10 4776164 4776190 -140813098 + (TA)n Simple_repeat Simple_repeat 1 26 0 * 875 228 0 0 chr10 4776261 4776428 -140812860 - MLT2C1 LTR ERVL -61 336 170 3972 205 59 19 chr10 4776429 4777391 -140811897 + L1MC2 LINE L1 5344 6344 0 3726 230 40 37 chr10 4777382 4777989 -140811299 + L1MB7 LINE L1 5186 5789 -893 * 1973 129 7 14 chr10 4777989 4778284 -140811004 + AluSx SINE Alu 7 299 -13 3726 230 40 37 chr10 4778284 4779133 -140810155 + L1MB7 LINE L1 5789 6662 -20 30 45 0 0 chr10 4779736 4779780 -140809508 + AT_rich Low_complexity Low_complexity 1 44 0 684 209 19 28 chr10 4782573 4782784 -140806504 - Charlie5 DNA MER1_type -15 2597 2389 246 105 0 0 chr10 4782797 4782835 -140806453 + (TA)n Simple_repeat Simple_repeat 1 38 0 424 251 123 25 chr10 4783164 4783399 -140805889 - LTR16A LTR ERVL -161 289 32 428 220 10 0 chr10 4783460 4783560 -140805728 + L1MA9 LINE L1 6047 6147 -165 942 76 52 6 chr10 4783580 4783752 -140805536 + GA-rich Low_complexity Low_complexity 1 180 0 267 79 0 0 chr10 4783752 4783790 -140805498 + (GGAA)n Simple_repeat Simple_repeat 3 40 0 301 215 118 0 chr10 4783813 4783906 -140805382 + L1MA9 LINE L1 6170 6273 -39 261 315 55 20 chr10 4785079 4785225 -140804063 + MLT1L LTR MaLR 465 615 0 25 0 0 0 chr10 4785332 4785357 -140803931 + AT_rich Low_complexity Low_complexity 1 25 0 26 64 0 0 chr10 4786052 4786099 -140803189 + AT_rich Low_complexity Low_complexity 1 47 0 1927 156 0 10 chr10 4786153 4786454 -140802834 - AluJb SINE Alu -14 298 1 2236 156 46 5 chr10 4786479 4786890 -140802398 + MSTA LTR MaLR 1 428 0 350 290 194 53 chr10 4786890 4787549 -140801739 + L1M4 LINE L1 2735 3486 -2660 4950 138 31 42 chr10 4787653 4788562 -140800726 - MER49 LTR ERV1 -24 899 1 1907 239 102 47 chr10 4788706 4789108 -140800180 - L1MC4 LINE L1 -343 7699 7320 1951 143 50 34 chr10 4789108 4789466 -140799822 + THE1B LTR MaLR 1 364 0 1907 239 102 47 chr10 4789466 4789802 -140799486 - L1MC4 LINE L1 -722 7320 6921 22 35 0 0 chr10 4789804 4789833 -140799455 + AT_rich Low_complexity Low_complexity 1 29 0 22 35 0 0 chr10 4790137 4790166 -140799122 + AT_rich Low_complexity Low_complexity 1 29 0 28 0 0 0 chr10 4792324 4792352 -140796936 + AT_rich Low_complexity Low_complexity 1 28 0 7659 33 3 1 chr10 4792352 4793282 -140796006 - L1PA3 LINE L1 -3 6152 5210 544 295 108 38 chr10 4793546 4793915 -140795373 - L2 LINE L2 0 3313 2919 382 264 9 9 chr10 4793980 4794090 -140795198 + L2 LINE L2 2154 2263 -1051 959 134 210 0 chr10 4794276 4794462 -140794826 + AluSp SINE Alu 83 307 -6 21 57 0 0 chr10 4794617 4794652 -140794636 + AT_rich Low_complexity Low_complexity 1 35 0 1423 158 36 43 chr10 4795495 4795774 -140793514 - AluJo SINE Alu -19 293 17 369 320 51 37 chr10 4796687 4796819 -140792469 - L1ME LINE L1 -338 5783 5654 2193 96 4 0 chr10 4796819 4797127 -140792161 - AluSg SINE Alu 0 309 1 369 320 51 37 chr10 4797127 4797287 -140792001 - L1ME LINE L1 -467 5654 5486 22 0 0 0 chr10 4797357 4797379 -140791909 + AT_rich Low_complexity Low_complexity 1 22 0 396 252 176 25 chr10 4797784 4797943 -140791345 - MIR SINE MIR -4 258 76 236 260 39 0 chr10 4798057 4798134 -140791154 - MER116 DNA Mariner 0 80 1 23 78 0 0 chr10 4798161 4798212 -140791076 + AT_rich Low_complexity Low_complexity 1 51 0 1467 280 83 26 chr10 4798308 4799065 -140790223 + L1M4 LINE L1 3758 4557 -1589 282 303 92 26 chr10 4799784 4799936 -140789352 - HERV16 LTR ERVL -3819 1177 1016 297 326 64 35 chr10 4800302 4800474 -140788814 - MIR SINE MIR -71 191 15 298 319 6 75 chr10 4800730 4800890 -140788398 + MER5A DNA MER1_type 35 183 -6 189 107 0 0 chr10 4803614 4803642 -140785646 + (T)n Simple_repeat Simple_repeat 1 28 0 272 260 250 0 chr10 4804329 4804429 -140784859 - L2 LINE L2 0 3313 3189 29 28 0 0 chr10 4804663 4804699 -140784589 + AT_rich Low_complexity Low_complexity 1 36 0 363 282 99 42 chr10 4805072 4805214 -140784074 - MER5B DNA MER1_type -27 151 2 447 263 67 89 chr10 4807306 4807765 -140781523 - MLT1E LTR MaLR -101 534 1 1301 270 20 5 chr10 4807765 4808169 -140781119 + L1M4 LINE L1 3718 4127 -2019 852 167 0 0 chr10 4808171 4808297 -140780991 + AluJb SINE Alu 164 289 -23 445 234 138 5 chr10 4808304 4808492 -140780796 + L1M4 LINE L1 4626 4838 -1308 228 284 75 75 chr10 4808736 4808870 -140780418 + MLT1H LTR MaLR 400 533 -16 192 77 0 0 chr10 4809398 4809424 -140779864 + (A)n Simple_repeat Simple_repeat 1 26 0 4361 164 73 32 chr10 4809968 4810854 -140778434 + MER49 LTR ERV1 1 923 0 401 282 34 0 chr10 4810980 4811039 -140778249 - L1MA10 LINE L1 -1 6333 6275 1371 258 38 21 chr10 4811039 4811515 -140777773 - L1ME1 LINE L1 -54 6112 5629 697 207 14 7 chr10 4811538 4811678 -140777610 + MLT1A1 LTR MaLR 1 141 -224 2262 51 0 0 chr10 4811709 4811985 -140777303 - L1PA5 LINE L1 -13 6141 5866 1435 64 30 0 chr10 4811985 4812188 -140777100 + L1P LINE L1 5195 5403 -743 1334 160 26 0 chr10 4812198 4812429 -140776859 + MLT1A1 LTR MaLR 127 363 -2 305 303 111 25 chr10 4812429 4812591 -140776697 - L1ME1 LINE L1 -547 5615 5440 947 198 70 107 chr10 4812600 4812792 -140776496 - L1ME1 LINE L1 -1117 5029 4831 864 181 45 77 chr10 4812792 4813013 -140776275 + MER20 DNA MER1_type 2 215 -4 947 198 70 107 chr10 4813013 4813249 -140776039 - L1ME1 LINE L1 -1315 4831 4617 6233 258 52 34 chr10 4813255 4813658 -140775630 - L1M4 LINE L1 -1300 4846 4452 1580 194 0 14 chr10 4813658 4813942 -140775346 - AluJo SINE Alu -32 280 1 6233 258 52 34 chr10 4813942 4816222 -140773066 - L1M4 LINE L1 -1694 4452 2113 1060 303 125 8 chr10 4816239 4817192 -140772096 - L1MDa LINE L1 -5313 1227 20 367 151 40 0 chr10 4817713 4817839 -140771449 + (TA)n Simple_repeat Simple_repeat 2 132 0 3795 152 102 67 chr10 4817839 4818710 -140770578 + MER21A LTR ERV1 13 914 -17 34 42 0 0 chr10 4819038 4819086 -140770202 + AT_rich Low_complexity Low_complexity 1 48 0 189 195 0 0 chr10 4820115 4820156 -140769132 + (TG)n Simple_repeat Simple_repeat 2 42 0 379 257 36 12 chr10 4820242 4820470 -140768818 + L1ME LINE L1 1352 1747 -4951 1064 240 86 17 chr10 4820499 4820926 -140768362 + L1ME LINE L1 5813 6286 -675 189 0 0 0 chr10 4820926 4820947 -140768341 + (TTAAA)n Simple_repeat Simple_repeat 5 25 0 1064 240 86 17 chr10 4820947 4821157 -140768131 + L1ME LINE L1 6286 6480 -481 1663 168 44 3 chr10 4821235 4821772 -140767516 + LTR26 LTR ERV1 1 603 0 1948 241 109 21 chr10 4821786 4822418 -140766870 - MER76 LTR ERV 0 688 1 23 0 0 0 chr10 4824328 4824351 -140764937 + AT_rich Low_complexity Low_complexity 1 23 0 261 218 0 0 chr10 4824917 4824972 -140764316 + C-rich Low_complexity Low_complexity 1 55 0 447 150 0 0 chr10 4825138 4825218 -140764070 + L1MA3 LINE L1 6226 6305 0 2227 116 0 19 chr10 4827067 4827386 -140761902 + AluSq SINE Alu 1 313 0 410 355 133 33 chr10 4827871 4828632 -140760656 - L2 LINE L2 -411 2903 2067 233 268 16 65 chr10 4828739 4828862 -140760426 + L1MCb LINE L1 421 537 -5885 943 225 25 49 chr10 4828866 4829191 -140760097 - LTR57 LTR ERVL 0 411 95 332 377 60 20 chr10 4829387 4829639 -140759649 - L2 LINE L2 -792 2522 2261 2027 223 12 0 chr10 4830057 4830456 -140758832 - LTR57 LTR ERVL 0 411 8 1558 275 67 28 chr10 4830688 4831793 -140757495 + L1MCb LINE L1 1215 2563 -4559 2117 201 21 23 chr10 4831796 4832328 -140756960 - L1MA9 LINE L1 -1 6311 5781 1333 268 47 32 chr10 4832328 4832585 -140756703 + L1MCb LINE L1 2863 3115 -3826 683 216 31 0 chr10 4832585 4832747 -140756541 + L1MB7 LINE L1 6010 6176 -8 1333 268 47 32 chr10 4832747 4833348 -140755940 + L1MCb LINE L1 3115 3698 -3243 3973 188 13 11 chr10 4834067 4834816 -140754472 + L1PA13 LINE L1 1114 1864 -4923 268 299 49 56 chr10 4834852 4834996 -140754292 - MIR3 SINE MIR -65 143 1 1225 151 103 0 chr10 4836890 4837122 -140752166 - L1MA8 LINE L1 -41 6250 5995 748 167 7 21 chr10 4837792 4837936 -140751352 + FRAM SINE Alu 11 152 -24 22 35 0 0 chr10 4838713 4838742 -140750546 + AT_rich Low_complexity Low_complexity 1 29 0 394 261 84 14 chr10 4838874 4839016 -140750272 - MIR3 SINE MIR -33 175 24 204 97 0 0 chr10 4839684 4839715 -140749573 + (TAAA)n Simple_repeat Simple_repeat 2 32 0 22 0 0 0 chr10 4839989 4840011 -140749277 + AT_rich Low_complexity Low_complexity 1 22 0 292 362 9 0 chr10 4840481 4840586 -140748702 - MER5A DNA MER1_type -80 109 4 352 304 76 49 chr10 4840597 4840781 -140748507 + MER5A DNA MER1_type 1 189 0 820 140 47 0 chr10 4841024 4841174 -140748114 - MER5A DNA MER1_type -22 167 11 28 29 0 0 chr10 4841681 4841716 -140747572 + AT_rich Low_complexity Low_complexity 1 35 0 984 211 122 96 chr10 4842243 4842666 -140746622 - MER66A LTR ERV1 -5 579 179 2101 147 0 0 chr10 4842666 4842978 -140746310 - AluSx SINE Alu 0 312 1 984 211 122 96 chr10 4842978 4843064 -140746224 - MER66A LTR ERV1 -405 179 97 642 296 32 20 chr10 4843130 4843471 -140745817 - L1MC/D LINE L1 -2172 5636 5292 1998 132 3 0 chr10 4843644 4843940 -140745348 + AluSc SINE Alu 1 297 -12 473 268 81 4 chr10 4844173 4844419 -140744869 - L1MC/D LINE L1 -2817 3329 3065 384 220 18 9 chr10 4844448 4844557 -140744731 + L1ME LINE L1 5000 5109 -1037 301 97 0 88 chr10 4844707 4844820 -140744468 + (TAAA)n Simple_repeat Simple_repeat 2 104 0 1606 223 26 37 chr10 4844826 4845355 -140743933 + L1ME LINE L1 5157 5683 -483 2335 85 0 26 chr10 4846921 4847263 -140742025 - L1PA8 LINE L1 -2 6170 5838 21 0 0 0 chr10 4847412 4847433 -140741855 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 4848721 4848749 -140740539 + AT_rich Low_complexity Low_complexity 1 28 0 245 322 0 11 chr10 4849788 4849878 -140739410 + (CA)n Simple_repeat Simple_repeat 1 89 0 251 233 17 0 chr10 4850030 4850090 -140739198 - MLT1G1 LTR MaLR 0 595 535 23 0 0 0 chr10 4850657 4850680 -140738608 + AT_rich Low_complexity Low_complexity 1 23 0 2190 116 7 0 chr10 4850867 4851159 -140738129 + AluSc SINE Alu 6 299 -10 317 228 12 64 chr10 4851231 4851402 -140737886 + L1MEd LINE L1 1055 1216 -4903 200 189 0 0 chr10 4851449 4851486 -140737802 + (TG)n Simple_repeat Simple_repeat 2 38 0 231 300 120 10 chr10 4852171 4852271 -140737017 + MLT1I LTR MaLR 31 141 -268 2280 91 0 0 chr10 4852991 4853288 -140736000 - AluY SINE Alu -14 297 1 605 270 17 31 chr10 4854038 4854291 -140734997 + MER77 LTR ERV1 450 745 -7 2282 241 55 29 chr10 4854322 4855123 -140734165 + MER77-int LTR ERV1 3261 4130 -61 1531 265 81 21 chr10 4855657 4856174 -140733114 + MER77 LTR ERV1 51 598 -7 322 288 16 16 chr10 4856184 4856309 -140732979 + L1MC4 LINE L1 7434 7558 -484 243 272 29 39 chr10 4856436 4856539 -140732749 - MLT1K LTR MaLR -347 241 140 1601 169 20 30 chr10 4857143 4857444 -140731844 - AluJo SINE Alu -14 298 1 232 211 0 18 chr10 4858534 4858591 -140730697 + A-rich Low_complexity Low_complexity 3 58 0 22 0 0 0 chr10 4858817 4858839 -140730449 + AT_rich Low_complexity Low_complexity 1 22 0 36867 93 20 19 chr10 4959554 4965289 -140623999 + Harlequin LTR ERV1 17 4944 0 608 195 43 43 chr10 4965290 4965592 -140623696 + Harlequin LTR ERV1 840 1141 -5755 * 8756 94 72 69 chr10 4965588 4968095 -140621193 + pTR5 LTR ERV1 504 8399 0 2258 105 0 10 chr10 4968488 4968784 -140620504 - AluSx SINE Alu -19 293 1 247 308 75 0 chr10 4970144 4970264 -140619024 + L1MC4 LINE L1 6929 7057 -985 241 264 109 29 chr10 4970449 4970623 -140618665 + L1M4 LINE L1 4415 4602 -1544 204 177 38 25 chr10 4971251 4971330 -140617958 + (TA)n Simple_repeat Simple_repeat 2 81 0 982 282 111 24 chr10 4971392 4971843 -140617445 + MLT1H LTR MaLR 43 532 -17 278 142 12 6 chr10 4972065 4972312 -140616976 + AluSq SINE Alu 1 306 -2 269 194 45 0 chr10 4972864 4972931 -140616357 + MER5A DNA MER1_type 7 76 -113 262 361 0 0 chr10 4973470 4973589 -140615699 + L1MC4 LINE L1 6888 7006 -1036 26 0 0 0 chr10 4973621 4973647 -140615641 + AT_rich Low_complexity Low_complexity 1 26 0 21 36 0 0 chr10 4973908 4973936 -140615352 + AT_rich Low_complexity Low_complexity 1 28 0 344 230 80 102 chr10 4974120 4974481 -140614807 + L1MC4 LINE L1 7690 8042 0 1771 62 0 37 chr10 4974701 4974945 -140614343 + L1P LINE L1 553 787 -5359 * 15140 48 3 2 chr10 4974943 4976812 -140612476 + L1P LINE L1 2466 4335 -1811 29263 26 1 0 chr10 4976912 4981100 -140608188 + L1PA3 LINE L1 1967 6155 0 381 308 64 0 chr10 4981102 4981258 -140608030 + HERVL LTR ERVL 293 458 -5306 330 356 40 7 chr10 4981249 4981398 -140607890 + HERVL LTR ERVL 126 279 -5375 * 688 250 0 0 chr10 4981408 4981568 -140607720 - L1P LINE L1 -928 5218 5059 1967 208 45 14 chr10 4981678 4982097 -140607191 - MSTB1 LTR MaLR 0 432 1 2296 253 20 42 chr10 4982110 4982707 -140606581 - MSTB1-int LTR MaLR -92 1559 976 239 247 21 32 chr10 4982949 4983042 -140606246 + GA-rich Low_complexity Low_complexity 5 96 0 722 229 85 106 chr10 4983104 4983576 -140605712 - MER4C LTR ERV1 0 465 4 268 270 14 0 chr10 4983613 4983687 -140605601 - MER4C-int LTR ERV1 -126 6472 6398 7491 185 53 22 chr10 4983816 4985560 -140603728 - MER4C-int LTR ERV1 -575 5756 3959 4248 140 15 58 chr10 4985560 4986282 -140603006 - LTR8 LTR ERV1 0 691 1 2333 114 0 0 chr10 4986297 4986596 -140602692 - AluSx SINE Alu -13 299 1 2552 151 73 14 chr10 4986596 4987033 -140602255 - HUERS-P1 LTR ERV1 -7 6256 5794 323 239 114 0 chr10 4987043 4987131 -140602157 + LTR49-int LTR ERV1 6045 6142 -189 1031 184 22 0 chr10 4987143 4987328 -140601960 + LTR49-int LTR ERV1 5816 6004 -327 902 120 84 0 chr10 4987342 4987484 -140601804 - MER39B LTR ERV1 -499 154 1 497 204 19 0 chr10 4987484 4987584 -140601704 + LTR49 LTR ERV1 492 593 -2 486 320 31 16 chr10 4987603 4987797 -140601491 - LTR40a LTR ERVL -322 197 1 314 274 63 84 chr10 4987797 4987987 -140601301 + L2 LINE L2 3128 3313 0 2130 117 163 14 chr10 4988217 4988586 -140600702 - MSTA LTR MaLR -4 424 1 525 240 91 39 chr10 4989892 4990146 -140599142 + ORSL DNA AcHobo 9 275 0 260 284 93 47 chr10 4990551 4990787 -140598501 + Charlie2 DNA MER1_type 33 279 -2503 424 316 83 18 chr10 4990823 4991101 -140598187 + MER92B LTR ERV1 250 545 -91 297 127 38 13 chr10 4991265 4991344 -140597944 + (TCTA)n Simple_repeat Simple_repeat 1 81 0 315 232 71 19 chr10 4991536 4991691 -140597597 + Charlie2 DNA MER1_type 2696 2858 -4 242 323 31 31 chr10 4992133 4992229 -140597059 - MIR SINE MIR -93 115 20 994 257 73 16 chr10 4992677 4993058 -140596230 + L1ME2 LINE L1 5696 6098 -66 705 261 39 32 chr10 4993678 4993958 -140595330 + L1MC4 LINE L1 6762 7043 -999 284 261 63 56 chr10 4993988 4994130 -140595158 + L1MC5 LINE L1 7322 7464 -497 586 258 112 29 chr10 4994139 4994557 -140594731 + L2 LINE L2 2009 2461 -853 378 319 127 0 chr10 4995343 4995500 -140593788 - MIR3 SINE MIR -6 202 26 236 261 11 0 chr10 4995779 4995871 -140593417 + (TG)n Simple_repeat Simple_repeat 1 93 0 192 270 81 27 chr10 4997319 4997393 -140591895 - MIR SINE MIR -75 187 110 365 148 0 148 chr10 4998359 4998447 -140590841 + MER61E LTR ERV1 37 111 -458 * 382 198 0 25 chr10 4998427 4998508 -140590780 + LTR25 LTR ERV1 215 293 -501 2305 177 50 64 chr10 4998627 4999199 -140590089 + LTR25 LTR ERV1 251 569 0 3721 198 50 28 chr10 4999202 5000016 -140589272 + LTR25-int LTR ERV1 3 834 -6162 5483 2 0 0 chr10 5000116 5000708 -140588580 + L1HS LINE L1 5564 6155 0 1844 137 23 31 chr10 5000713 5001270 -140588018 + LTR10E LTR ERV1 8 612 -21 241 189 126 31 chr10 5001886 5002013 -140587275 + LTR33A LTR ERVL 324 462 -61 350 315 124 35 chr10 5002458 5002772 -140586516 - L2 LINE L2 -1 3312 2971 1569 188 23 31 chr10 5003054 5003182 -140586106 + MLT1A1 LTR MaLR 12 140 -225 2427 154 56 5 chr10 5003182 5003591 -140585697 - MSTB1 LTR MaLR -2 430 1 1569 188 23 31 chr10 5003591 5003814 -140585474 + MLT1A1 LTR MaLR 140 360 -5 378 183 97 11 chr10 5004013 5004106 -140585182 - MSTB2 LTR MaLR 0 457 357 22142 58 8 5 chr10 5004106 5007616 -140581672 + L1PA5 LINE L1 2628 6149 -5 837 252 59 50 chr10 5007744 5008085 -140581203 - L1MC4 LINE L1 -201 7841 7498 2623 162 41 9 chr10 5008571 5009010 -140580278 + MER6 DNA MER2_type 2 454 -411 759 253 113 76 chr10 5009900 5010323 -140578965 - LTR32 LTR ERVL -27 444 6 281 145 194 0 chr10 5010297 5010359 -140578929 - LTR32 LTR ERVL -383 88 15 * 297 136 0 0 chr10 5010357 5010401 -140578887 - LTR32 LTR ERVL -413 58 15 264 177 194 0 chr10 5010381 5010443 -140578845 - LTR32 LTR ERVL -383 88 15 * 346 104 224 0 chr10 5010424 5010491 -140578797 - LTR32 LTR ERVL -384 87 6 287 145 194 0 chr10 5010465 5010527 -140578761 - LTR32 LTR ERVL -383 88 15 * 290 159 0 0 chr10 5010525 5010569 -140578719 - LTR32 LTR ERVL -413 58 15 258 242 100 23 chr10 5011201 5011298 -140577990 - MER5B DNA MER1_type -4 174 75 2305 76 0 3 chr10 5011298 5011589 -140577699 - AluY SINE Alu -21 290 1 258 242 100 23 chr10 5011589 5011608 -140577680 - MER5B DNA MER1_type -103 75 59 2956 163 64 12 chr10 5011626 5012192 -140577096 + LTR49 LTR ERV1 1 595 0 1147 209 32 66 chr10 5012526 5012904 -140576384 + MER31A LTR ERV1 1 365 -120 6436 84 12 12 chr10 5012904 5013810 -140575478 - PABL_A-int LTR ERV1 -401 4614 3709 521 253 70 19 chr10 5013910 5014068 -140575220 + Tigger1 DNA MER2_type 2252 2417 -1 956 225 16 0 chr10 5014471 5014662 -140574626 + MER7A DNA MER2_type 12 203 -143 44945 40 1 4 chr10 5014690 5020862 -140568426 - L1PA3 LINE L1 -2 6153 2 861 81 0 65 chr10 5020977 5021101 -140568187 + AluSc SINE Alu 54 169 -140 2084 113 28 0 chr10 5021123 5021407 -140567881 - AluSx SINE Alu -20 292 1 465 275 51 29 chr10 5021414 5021552 -140567736 + MER7A DNA MER2_type 197 337 0 765 242 36 12 chr10 5021552 5021800 -140567488 - L1M4c LINE L1 -4006 2378 2125 2020 145 0 20 chr10 5022116 5022419 -140566869 - AluSx SINE Alu -6 306 10 2339 91 0 0 chr10 5022540 5022838 -140566450 - AluY SINE Alu -13 298 1 25 51 0 0 chr10 5022913 5022952 -140566336 + AT_rich Low_complexity Low_complexity 1 39 0 643 338 61 7 chr10 5023089 5023385 -140565903 - L2 LINE L2 -890 2424 2113 1916 158 0 3 chr10 5025767 5026064 -140563224 - AluSx SINE Alu -16 296 1 1794 227 65 8 chr10 5027178 5027579 -140561709 + MSTB LTR MaLR 1 424 -2 2127 225 20 4 chr10 5027581 5028039 -140561249 + MSTB-int LTR MaLR 1 465 -1186 315 256 39 45 chr10 5028594 5028750 -140560538 + L1M4 LINE L1 5115 5269 -877 284 263 103 39 chr10 5028765 5028921 -140560367 + MLT1H LTR MaLR 357 522 -27 186 229 12 108 chr10 5029098 5029181 -140560107 - MIR3 SINE MIR -39 169 95 358 234 84 0 chr10 5029664 5029771 -140559517 + MER5A DNA MER1_type 1 116 -73 409 299 72 14 chr10 5030200 5030421 -140558867 + L1MC4 LINE L1 6832 7065 -977 2187 128 51 26 chr10 5030477 5030828 -140558460 + THE1B LTR MaLR 3 362 -2 9293 164 34 37 chr10 5030830 5031657 -140557631 + THE1B-int LTR MaLR 15 836 -744 2357 86 0 20 chr10 5031657 5031960 -140557328 + AluSg SINE Alu 1 297 -13 9293 164 34 37 chr10 5031960 5032701 -140556587 + THE1B-int LTR MaLR 836 1578 -2 1985 130 103 30 chr10 5032703 5033042 -140556246 + THE1B LTR MaLR 1 364 0 23 0 0 0 chr10 5033148 5033171 -140556117 + AT_rich Low_complexity Low_complexity 1 23 0 386 242 114 72 chr10 5033269 5033533 -140555755 + L1MC4 LINE L1 7210 7484 -558 353 171 0 26 chr10 5033837 5033913 -140555375 + L1MC5 LINE L1 7603 7676 -285 252 304 22 29 chr10 5036519 5036657 -140552631 + L2 LINE L2 1790 1926 -1388 1932 256 26 37 chr10 5038799 5039451 -140549837 + L1PB2 LINE L1 3 647 -6216 884 194 16 0 chr10 5039462 5039584 -140549704 + L1PB2 LINE L1 4275 4402 -2460 360 0 0 0 chr10 5039584 5039624 -140549664 + (CA)n Simple_repeat Simple_repeat 2 41 0 884 194 16 0 chr10 5039624 5039687 -140549601 + L1PB2 LINE L1 4402 4463 -2399 405 0 0 0 chr10 5039990 5040035 -140549253 + (CA)n Simple_repeat Simple_repeat 2 46 0 6354 181 79 10 chr10 5040035 5041947 -140547341 + L1PB2 LINE L1 4404 6453 -414 1919 179 22 11 chr10 5042050 5042414 -140546874 + L1PB2 LINE L1 6498 6865 -2 4185 130 56 73 chr10 5042899 5043697 -140545591 - LTR1 LTR ERV1 0 785 1 238 352 34 0 chr10 5043810 5043898 -140545390 - MER81 DNA DNA 0 114 24 258 303 0 0 chr10 5043920 5043986 -140545302 - MER68 LTR ERV1 -6 556 491 1332 179 21 69 chr10 5044000 5044291 -140544997 - AluJb SINE Alu -27 285 9 1292 289 61 7 chr10 5044318 5044743 -140544545 - MER68 LTR ERV1 -114 448 1 1224 239 108 49 chr10 5045359 5045887 -140543401 + MER31-int LTR ERV1 1914 2472 -2464 2339 86 0 13 chr10 5045929 5046231 -140543057 - AluSp SINE Alu -15 298 1 222 312 136 0 chr10 5047149 5047303 -140541985 + L2 LINE L2 1783 1957 -1357 387 277 84 47 chr10 5050051 5050333 -140538955 - MER68 LTR ERV1 -6 599 238 489 237 0 23 chr10 5052701 5052832 -140536456 + U8 snRNA snRNA 5 132 -4 2106 280 33 29 chr10 5053363 5054375 -140534913 + L1M4c LINE L1 806 1821 -4563 655 243 83 25 chr10 5054391 5054786 -140534502 + L1M4c LINE L1 1932 2349 -4035 228 296 0 0 chr10 5054789 5054843 -140534445 - Tigger3(Golem) DNA MER2_type -1 3028 2975 * 606 223 0 0 chr10 5054839 5054978 -140534310 + MLT1D LTR MaLR 364 502 -3 1103 286 106 24 chr10 5054980 5055441 -140533847 + L2 LINE L2 1589 2087 -1227 305 317 10 0 chr10 5055501 5055602 -140533686 + L1M4c LINE L1 955 1056 -5793 713 326 25 0 chr10 5055958 5056200 -140533088 + L1PA15-16 LINE L1 1263 1510 -5339 3214 255 52 33 chr10 5056305 5057855 -140531433 + L1PA15-16 LINE L1 2373 3999 -2850 2020 127 30 10 chr10 5057855 5058155 -140531133 + AluSx SINE Alu 1 306 -6 3214 255 52 33 chr10 5058155 5058251 -140531037 + L1PA15-16 LINE L1 3999 4092 -2757 * 26476 42 5 1 chr10 5058232 5061758 -140527530 + L1P2 LINE L1 1921 5460 -695 204 290 153 17 chr10 5062036 5062212 -140527076 + L2 LINE L2 1798 1997 -1317 966 303 94 16 chr10 5064957 5065469 -140523819 - MER68 LTR ERV1 -10 552 1 23 33 0 0 chr10 5067361 5067391 -140521897 + AT_rich Low_complexity Low_complexity 1 30 0 416 258 38 30 chr10 5067748 5067880 -140521408 + U8 snRNA snRNA 1 133 -3 225 265 68 34 chr10 5068206 5068323 -140520965 + L1M4c LINE L1 1016 1136 -5714 2194 246 40 50 chr10 5068403 5068440 -140520848 + L1M4c LINE L1 1243 1279 -5571 2025 123 3 10 chr10 5068440 5068733 -140520555 + AluSc SINE Alu 1 291 -18 2194 246 40 50 chr10 5068733 5069395 -140519893 + L1M4c LINE L1 1279 1946 -4904 1675 147 30 4 chr10 5069395 5069660 -140519628 + AluSx SINE Alu 36 307 -5 2194 246 40 50 chr10 5069660 5069826 -140519462 + L1M4c LINE L1 1946 2112 -4738 2048 122 17 0 chr10 5069826 5070113 -140519175 - AluSc SINE Alu -17 292 1 2194 246 40 50 chr10 5070113 5070300 -140518988 + L1M4c LINE L1 2112 2286 -4564 535 264 39 10 chr10 5070391 5070599 -140518689 + L1M4c LINE L1 2494 2707 -4143 2671 264 10 8 chr10 5070676 5071398 -140517890 - MST-int LTR MaLR -19 1632 910 223 208 0 38 chr10 5071643 5071696 -140517592 + GA-rich Low_complexity Low_complexity 2 52 0 3648 181 74 15 chr10 5072600 5073380 -140515908 + LTR1B LTR ERV1 1 826 0 524 258 19 80 chr10 5073874 5074235 -140515053 + L1 LINE L1 4982 5320 -826 386 165 13 25 chr10 5074249 5074328 -140514960 + L1PA15-16 LINE L1 1202 1279 -5570 * 666 203 120 0 chr10 5074326 5074484 -140514804 + L1PB4 LINE L1 5980 6156 0 196 290 16 16 chr10 5074493 5074555 -140514733 + MER5B DNA MER1_type 49 110 -68 1500 253 26 17 chr10 5075355 5075821 -140513467 + MLT1D LTR MaLR 36 505 0 711 302 60 0 chr10 5075828 5076093 -140513195 + L2 LINE L2 1598 1878 -1436 883 144 7 7 chr10 5076094 5076247 -140513041 + L1PA13 LINE L1 6004 6156 -7 22 88 0 0 chr10 5076778 5076835 -140512453 + AT_rich Low_complexity Low_complexity 1 57 0 378 192 48 29 chr10 5076850 5076954 -140512334 + LTR49-int LTR ERV1 1015 1120 -5211 1888 214 28 37 chr10 5077230 5077773 -140511515 - L1MB3 LINE L1 0 6183 5646 313 153 17 0 chr10 5077773 5077832 -140511456 - MER4A LTR ERV1 0 664 605 3557 286 15 1 chr10 5077837 5078755 -140510533 - PABL_B-int LTR ERV1 -2438 4684 3754 384 252 15 22 chr10 5078758 5078893 -140510395 + MER67C LTR ERV1 561 694 -16 1927 130 132 43 chr10 5079291 5079684 -140509604 - MSTA LTR MaLR 0 428 1 6314 182 7 12 chr10 5079685 5080854 -140508434 - MSTA-int LTR MaLR -1 1579 417 254 220 0 0 chr10 5080891 5080950 -140508338 - MSTA-int LTR MaLR -1159 421 363 291 176 14 68 chr10 5082685 5082749 -140506539 + U8 snRNA snRNA 1 62 -74 1966 139 36 0 chr10 5082749 5083050 -140506238 + AluSx SINE Alu 1 312 0 510 144 0 0 chr10 5083076 5083166 -140506122 - L1P5 LINE L1 -647 5509 5420 285 258 27 5 chr10 5083516 5083640 -140505648 + L1M4c LINE L1 650 925 -5721 344 188 36 80 chr10 5083691 5083803 -140505485 + L1M4c LINE L1 1035 1141 -5505 1417 252 6 6 chr10 5083875 5084240 -140505048 - L1PA16 LINE L1 -18 6148 5784 7918 248 43 7 chr10 5084288 5086687 -140502601 - L1PA16 LINE L1 -622 5534 2999 2183 108 0 7 chr10 5086687 5086984 -140502304 - AluSg1 SINE Alu -14 295 1 7918 248 43 7 chr10 5086984 5087565 -140501723 - L1PA16 LINE L1 -3157 2999 2440 226 277 0 0 chr10 5087568 5087651 -140501637 - L1 LINE L1 -3759 2387 2305 29 28 0 0 chr10 5087651 5087687 -140501601 + AT_rich Low_complexity Low_complexity 1 36 0 6172 190 14 4 chr10 5087687 5088993 -140500295 - L1P LINE L1 -1032 5114 3795 380 276 37 29 chr10 5089062 5089305 -140499983 + L1M4c LINE L1 2641 2885 -3759 853 179 68 8 chr10 5089320 5089554 -140499734 - Tigger1 DNA MER2_type 0 2418 2171 1262 295 124 32 chr10 5089557 5090519 -140498769 + L2 LINE L2 2246 3308 -5 751 290 70 35 chr10 5090717 5091180 -140498108 - MLT1E LTR MaLR -97 496 17 353 350 104 30 chr10 5091616 5091953 -140497335 + L3 LINE CR1 595 956 -621 23 68 0 0 chr10 5092088 5092132 -140497156 + AT_rich Low_complexity Low_complexity 1 44 0 2377 87 0 0 chr10 5092201 5092499 -140496789 - AluY SINE Alu -13 298 1 231 228 158 40 chr10 5093906 5094007 -140495281 - MIR SINE MIR 0 262 150 2272 190 69 15 chr10 5094242 5094777 -140494511 - LTR25 LTR ERV1 -4 788 244 506 74 0 25 chr10 5094799 5094880 -140494408 - LTR25 LTR ERV1 -501 293 215 286 187 0 165 chr10 5094860 5094951 -140494337 - MER61E LTR ERV1 -458 111 36 * 1922 199 10 20 chr10 5094975 5095477 -140493811 - MER61E-int LTR ERV1 -5 6991 6495 6710 204 36 34 chr10 5095590 5095788 -140493500 - MER61E-int LTR ERV1 -967 6451 6255 2080 125 7 3 chr10 5095788 5096083 -140493205 - AluSx SINE Alu -16 296 1 6710 204 36 34 chr10 5096083 5097571 -140491717 - MER61E-int LTR ERV1 -1163 6255 4763 25821 43 3 3 chr10 5097571 5101712 -140487576 + L1P LINE L1 1 4131 -2015 347 319 37 12 chr10 5102404 5102567 -140486721 + MER92B LTR ERV1 242 408 -228 225 0 48 48 chr10 5102653 5102695 -140486593 + (CAAAA)n Simple_repeat Simple_repeat 5 46 0 365 233 43 0 chr10 5102859 5102975 -140486313 + (TCTA)n Simple_repeat Simple_repeat 3 123 0 21 57 0 0 chr10 5103045 5103080 -140486208 + AT_rich Low_complexity Low_complexity 1 35 0 328 210 87 43 chr10 5103177 5103315 -140485973 + Charlie2 DNA MER1_type 2719 2862 0 271 323 0 83 chr10 5103751 5103884 -140485404 - MIR3 SINE MIR -84 124 3 1220 239 82 30 chr10 5104294 5104733 -140484555 + L1ME2 LINE L1 5690 6151 -13 650 234 33 85 chr10 5105295 5105590 -140483698 + L1MC4 LINE L1 6693 7021 -1006 437 249 69 42 chr10 5105608 5105797 -140483491 + L1MC5 LINE L1 7321 7514 -447 285 244 0 0 chr10 5105797 5105883 -140483405 + GA-rich Low_complexity Low_complexity 3 88 0 592 235 112 76 chr10 5105888 5105937 -140483351 + L1MC5 LINE L1 7472 7518 -443 1982 108 58 0 chr10 5105937 5106214 -140483074 + AluSg SINE Alu 1 293 -17 592 235 112 76 chr10 5106214 5106547 -140482741 + L1MC5 LINE L1 7518 7868 -93 6510 149 35 15 chr10 5106565 5107680 -140481608 + HSMAR2 DNA Mariner 2 1138 -164 393 209 29 0 chr10 5107842 5107947 -140481341 + HSMAR2 DNA Mariner 1192 1299 -3 28 71 0 0 chr10 5107961 5108017 -140481271 + AT_rich Low_complexity Low_complexity 1 56 0 276 333 26 0 chr10 5108284 5108398 -140480890 + MLT1L LTR MaLR 173 289 -326 275 185 0 19 chr10 5108579 5108633 -140480655 + MLT1L LTR MaLR 555 607 -8 32 43 0 0 chr10 5108807 5108853 -140480435 + AT_rich Low_complexity Low_complexity 1 46 0 640 271 124 47 chr10 5109059 5109656 -140479632 + L2 LINE L2 1819 2461 -853 394 308 119 13 chr10 5110446 5110605 -140478683 - MIR3 SINE MIR -6 202 27 414 262 0 0 chr10 5110844 5110993 -140478295 + (TG)n Simple_repeat Simple_repeat 2 150 0 7556 43 12 0 chr10 5112489 5113742 -140475546 + L1PA4 LINE L1 4886 6150 -5 756 222 160 31 chr10 5113748 5113978 -140475310 + MER65-int LTR ERV1 2493 4559 -1704 * 4767 257 21 7 chr10 5113967 5115065 -140474223 + MER65-int LTR ERV1 1584 2696 -6223 1278 79 0 0 chr10 5115066 5115231 -140474057 - LTR19B LTR ERV1 -413 167 3 1322 164 9 0 chr10 5115234 5115448 -140473840 - HERVFH19I LTR ERV1 -1 7718 7503 * 11773 92 9 5 chr10 5115447 5117032 -140472256 - LTR19-int LTR ERV1 -337 5249 3658 13210 51 76 4 chr10 5117132 5118851 -140470437 - L1P LINE L1 -4302 1844 2 1935 195 46 2 chr10 5119000 5119394 -140469894 - MSTB LTR MaLR -15 411 1 372 245 21 21 chr10 5120081 5120175 -140469113 - L1ME1 LINE L1 -5 6161 6068 2583 216 35 24 chr10 5120211 5120836 -140468452 + LTR48B LTR ERV1 13 644 0 1747 257 43 19 chr10 5120836 5121366 -140467922 - L1ME1 LINE L1 -99 6067 5525 665 238 37 56 chr10 5121406 5121620 -140467668 - L1MDa LINE L1 -6244 296 87 217 351 40 35 chr10 5121897 5122099 -140467189 + L2 LINE L2 2971 3173 -140 7757 121 50 1 chr10 5122163 5123325 -140465963 - HSMAR1 DNA Mariner -56 1231 13 29379 116 32 63 chr10 5123325 5126206 -140463082 - L1PA7 LINE L1 -16 6138 3167 210 37 0 0 chr10 5126206 5126233 -140463055 + (TG)n Simple_repeat Simple_repeat 2 28 0 29379 116 32 63 chr10 5126233 5129699 -140459589 - L1PA7 LINE L1 -2987 3167 12 423 218 29 35 chr10 5130869 5131039 -140458249 - L1ME1 LINE L1 -872 5274 5106 256 200 0 0 chr10 5131053 5131103 -140458185 - MERVL-B3 LTR ERVL -5042 443 394 1080 209 50 56 chr10 5131141 5131499 -140457789 - MERVL-B3 LTR ERVL -5298 356 1 231 125 0 0 chr10 5131534 5131574 -140457714 + (TG)n Simple_repeat Simple_repeat 1 40 0 2064 233 27 33 chr10 5131574 5132085 -140457203 - MLT2B3 LTR ERVL -46 508 1 8968 174 48 23 chr10 5132123 5132661 -140456627 + Tigger1 DNA MER2_type 2 525 -1893 2262 92 7 0 chr10 5132661 5132943 -140456345 - AluSg SINE Alu -25 285 2 8968 174 48 23 chr10 5132943 5134202 -140455086 + Tigger1 DNA MER2_type 525 1845 -573 5405 37 0 6 chr10 5134335 5134959 -140454329 + L1PA4 LINE L1 5535 6154 -1 3481 240 11 33 chr10 5134959 5135894 -140453394 + L1 LINE L1 3386 4299 -1847 1033 292 58 18 chr10 5136849 5137243 -140452045 + LTR26 LTR ERV1 191 600 -3 1833 166 0 11 chr10 5137380 5137692 -140451596 - AluSx SINE Alu 0 309 1 802 202 71 158 chr10 5138093 5138738 -140450550 - LTR49 LTR ERV1 0 595 7 2983 133 11 77 chr10 5139470 5139587 -140449701 + MER75 DNA T2_type 1 124 -390 1842 131 0 66 chr10 5139587 5139892 -140449396 - AluSx SINE Alu -27 285 1 2983 133 11 77 chr10 5139892 5140323 -140448965 + MER75 DNA T2_type 124 513 -1 509 169 11 0 chr10 5141520 5141609 -140447679 - MSTD LTR MaLR 0 428 339 201 39 0 0 chr10 5141611 5141637 -140447651 + (GA)n Simple_repeat Simple_repeat 1 26 0 874 186 34 0 chr10 5141649 5141826 -140447462 - MSTD LTR MaLR -213 183 1 2280 105 3 0 chr10 5142147 5142441 -140446847 - AluSp SINE Alu -18 295 1 547 152 132 111 chr10 5142672 5142931 -140446357 - LTR49 LTR ERV1 -1 594 285 518 139 285 7 chr10 5142931 5143068 -140446220 - MER4C LTR ERV1 0 465 291 912 194 155 52 chr10 5143124 5143434 -140445854 - MER4A LTR ERV1 -322 342 1 1398 184 23 0 chr10 5143435 5143694 -140445594 - LTR49 LTR ERV1 -308 287 23 1830 151 3 22 chr10 5143694 5144046 -140445242 - MER4A LTR ERV1 0 664 261 613 121 10 20 chr10 5144046 5144145 -140445143 - MER4A LTR ERV1 -566 98 1 425 224 26 26 chr10 5144172 5144288 -140445000 - MER31B LTR ERV1 -106 360 245 332 180 60 20 chr10 5144671 5144771 -140444517 - MER67C LTR ERV1 0 710 607 1531 143 0 0 chr10 5144772 5144995 -140444293 + AluSg SINE Alu 1 223 -87 360 62 0 0 chr10 5145098 5145146 -140444142 + pTR5 LTR ERV1 345 392 -2046 2213 124 3 0 chr10 5145729 5146036 -140443252 + AluSq SINE Alu 1 308 -5 387 308 0 9 chr10 5147289 5147396 -140441892 - MER68 LTR ERV1 -110 452 347 359 264 64 9 chr10 5149152 5149262 -140440026 + U8 snRNA snRNA 21 136 0 4109 162 70 69 chr10 5149483 5150436 -140438852 + LTR13 LTR ERVK 1 954 0 74202 6 2 3 chr10 5150436 5158562 -140430726 + HERVK13 LTR ERVK 1 8116 0 844 215 52 40 chr10 5158562 5158813 -140430475 + LTR13 LTR ERVK 1 254 -753 13461 55 19 3 chr10 5158818 5160467 -140428821 - HERVK14 LTR ERVK -3083 2862 1188 1768 215 80 67 chr10 5160594 5161180 -140428108 - MER67C LTR ERV1 -89 621 28 2299 221 32 15 chr10 5161514 5162047 -140427241 - MER67A LTR ERV1 -1 542 1 679 335 0 0 chr10 5162245 5162442 -140426846 + MSTD LTR MaLR 200 396 0 1103 256 19 4 chr10 5162639 5162905 -140426383 - MLT1A1 LTR MaLR 0 365 96 2693 130 19 0 chr10 5162905 5163275 -140426013 + MER51B LTR ERV1 1 377 0 1976 166 92 26 chr10 5163275 5163654 -140425634 + MER51B-int LTR ERV1 1 404 -7412 2059 151 3 0 chr10 5163660 5163959 -140425329 - AluSq SINE Alu -13 300 1 879 108 7 7 chr10 5163959 5164107 -140425181 + LTR49-int LTR ERV1 1993 2140 -5676 2049 134 64 0 chr10 5164115 5164443 -140424845 + LTR49-int LTR ERV1 2964 3312 -4504 1498 129 19 23 chr10 5164439 5164703 -140424585 + LTR49-int LTR ERV1 2832 3094 -2852 * 877 143 27 0 chr10 5164706 5164853 -140424435 - GSAT Satellite centromeric -27 190 40 856 172 93 54 chr10 5164855 5165059 -140424229 + LTR49-int LTR ERV1 1762 1973 -3244 * 8231 184 102 69 chr10 5165041 5166492 -140422796 + LTR49-int LTR ERV1 4954 6356 -1460 234 0 0 0 chr10 5166492 5166518 -140422770 + (CAAA)n Simple_repeat Simple_repeat 2 27 0 8231 184 102 69 chr10 5166518 5167720 -140421568 + LTR49-int LTR ERV1 6356 7816 0 838 155 30 24 chr10 5167862 5168030 -140421258 - MSTA-int LTR MaLR -1482 169 1 2104 152 129 28 chr10 5168030 5168418 -140420870 - MSTA LTR MaLR 0 428 2 420 214 19 10 chr10 5168454 5168557 -140420731 + MER31B LTR ERV1 257 360 -106 1954 184 11 3 chr10 5168560 5168908 -140420380 + LTR49 LTR ERV1 3 353 -242 1168 228 35 27 chr10 5168914 5169173 -140420115 - AluJo SINE Alu -49 263 3 744 199 89 171 chr10 5170938 5171586 -140417702 + LTR49 LTR ERV1 1 595 0 1120 280 79 17 chr10 5172089 5172557 -140416731 - LTR26 LTR ERV1 -3 600 104 1008 106 0 35 chr10 5173030 5173171 -140416117 - AluSq/x SINE Alu -175 137 2 682 258 19 24 chr10 5173370 5173604 -140415684 - MLT1E LTR MaLR -98 495 252 189 74 0 0 chr10 5174914 5174941 -140414347 + (TTA)n Simple_repeat Simple_repeat 1 27 0 298 157 20 0 chr10 5175341 5175392 -140413896 - LTR29 LTR ERV1 0 622 571 336 270 0 0 chr10 5176361 5176509 -140412779 + (TG)n Simple_repeat Simple_repeat 1 148 0 2243 210 35 8 chr10 5176541 5177026 -140412262 + L1P LINE L1 4410 4907 -1239 552 103 103 0 chr10 5177034 5177131 -140412157 + L1PA15 LINE L1 6053 6159 -6 1076 160 52 16 chr10 5177168 5177362 -140411926 - MER50 LTR ERV1 -533 201 1 1844 162 10 0 chr10 5177363 5177660 -140411628 - MER50-int LTR ERV1 -24 7181 6882 * 7452 147 14 14 chr10 5177659 5178313 -140410975 - MER41-int LTR ERV1 -463 5483 4827 216 0 0 0 chr10 5178313 5178337 -140410951 + (CAA)n Simple_repeat Simple_repeat 2 25 0 7452 147 14 14 chr10 5178337 5178955 -140410333 - MER41-int LTR ERV1 -1118 4828 4211 3055 174 78 41 chr10 5179057 5179740 -140409548 - pTR5 LTR ERV1 -990 1448 741 570 325 96 17 chr10 5180855 5181147 -140408141 + L2 LINE L2 2110 2424 -890 631 264 66 46 chr10 5181519 5182046 -140407242 + L1M4c LINE L1 1713 2342 -4042 1479 170 120 0 chr10 5182046 5182322 -140406966 + AluSx SINE Alu 1 309 -3 631 264 66 46 chr10 5182322 5182359 -140406929 + L1M4c LINE L1 2342 2377 -4007 297 276 11 11 chr10 5182361 5182448 -140406840 - Tigger3(Golem) DNA MER2_type 0 3038 2952 1820 196 15 15 chr10 5182451 5182843 -140406445 - Tigger1 DNA MER2_type -467 1951 1560 3201 99 47 0 chr10 5182843 5182879 -140406409 - MLT2A1 LTR ERVL 0 444 411 195 69 0 0 chr10 5182879 5182908 -140406380 + (TA)n Simple_repeat Simple_repeat 1 29 0 3201 99 47 0 chr10 5182908 5183295 -140405993 - MLT2A1 LTR ERVL -33 411 1 6984 93 43 6 chr10 5183295 5184279 -140405009 - HERVL-A1 LTR ERVL 0 5654 4635 2058 70 11 22 chr10 5184272 5184543 -140404745 - HERVL-A1 LTR ERVL -1742 3912 3645 * 2128 131 25 0 chr10 5184545 5184865 -140404423 + MER75 DNA T2_type 187 514 0 2064 188 53 14 chr10 5185265 5185681 -140403607 - MSTB1 LTR MaLR 0 432 1 1309 232 27 55 chr10 5185681 5186048 -140403240 - MSTB1-int LTR MaLR 0 1651 1295 2152 150 53 3 chr10 5186051 5186411 -140402877 - MER39B LTR ERV1 -270 383 6 603 181 9 0 chr10 5186414 5186519 -140402769 + LTR49 LTR ERV1 490 595 0 639 291 9 36 chr10 5186520 5186740 -140402548 - LTR40a LTR ERVL -305 214 1 255 317 84 42 chr10 5186780 5186922 -140402366 + L2 LINE L2 3166 3313 0 285 270 93 28 chr10 5187016 5187264 -140402024 + L1ME4a LINE L1 5808 6071 -50 3106 108 82 4 chr10 5187643 5188117 -140401171 + MER9 LTR ERVK 1 511 0 333 208 73 0 chr10 5189306 5189402 -140399886 + ORSL DNA AcHobo 1 103 -172 240 281 141 20 chr10 5189927 5190126 -140399162 + Charlie2 DNA MER1_type 31 253 -2529 287 284 90 19 chr10 5190354 5190509 -140398779 - MER92B LTR ERV1 -97 539 374 185 379 131 0 chr10 5190664 5190817 -140398471 - MIR3 SINE MIR -33 175 3 421 198 69 10 chr10 5191245 5191346 -140397942 + MER5A DNA MER1_type 8 114 -75 404 335 93 4 chr10 5191766 5192023 -140397265 + L1MC4 LINE L1 6783 7062 -980 22 80 0 0 chr10 5192277 5192327 -140396961 + AT_rich Low_complexity Low_complexity 1 50 0 411 241 35 41 chr10 5192434 5192579 -140396709 + L1MC4 LINE L1 7277 7420 -622 12813 213 44 16 chr10 5193088 5195146 -140394142 + L1PB2 LINE L1 2 2000 -4208 2133 114 9 19 chr10 5195146 5195461 -140393827 + AluSx SINE Alu 1 312 0 12813 213 44 16 chr10 5195461 5199882 -140389406 + L1PB2 LINE L1 2000 6045 -163 874 207 38 42 chr10 5200023 5200260 -140389028 + L1PB2 LINE L1 5916 6151 0 1314 199 17 52 chr10 5201019 5201306 -140387982 - AluJb SINE Alu -27 285 9 911 298 40 6 chr10 5201333 5201739 -140387549 - MER68 LTR ERV1 -114 448 1 544 33 55 0 chr10 5203430 5203521 -140385767 + (TCTA)n Simple_repeat Simple_repeat 2 97 0 288 237 66 13 chr10 5204136 5204187 -140385101 + U8 snRNA snRNA 15 73 -63 1561 195 4 0 chr10 5204187 5204444 -140384844 + AluSq SINE Alu 1 258 -55 288 237 66 13 chr10 5204444 5204468 -140384820 + U8 snRNA snRNA 73 94 -42 465 167 1 0 chr10 5204472 5204565 -140384723 - L1P5 LINE L1 -647 5509 5416 457 285 36 28 chr10 5204572 5204821 -140384467 + L1M4 LINE L1 2142 2392 -3754 1004 236 38 4 chr10 5204831 5205094 -140384194 - Tigger1 DNA MER2_type 0 2418 2147 436 141 0 0 chr10 5205109 5205173 -140384115 + L1P LINE L1 11 74 -6072 * 3134 55 57 2 chr10 5205172 5205591 -140383697 + L1PA6 LINE L1 3640 4081 -2065 5669 98 108 33 chr10 5205591 5206679 -140382609 - MER11A LTR ERVK 0 1266 1 10244 48 12 0 chr10 5206679 5208581 -140380707 + L1PA6 LINE L1 4076 6003 -151 3352 246 24 12 chr10 5208689 5209693 -140379595 - L1PBb LINE L1 -4144 2705 1598 846 264 129 27 chr10 5209723 5210018 -140379270 - L1PBb LINE L1 -5288 1561 1237 552 28 42 0 chr10 5210018 5210089 -140379199 - pTR5 LTR ERV1 -2286 152 79 351 172 63 81 chr10 5210089 5210200 -140379088 - LTR30 LTR ERV1 -70 724 544 4508 131 77 71 chr10 5210200 5211239 -140378049 - pTR5 LTR ERV1 -413 2025 743 26 0 0 0 chr10 5211539 5211565 -140377723 + AT_rich Low_complexity Low_complexity 1 26 0 36 23 0 0 chr10 5212275 5212318 -140376970 + AT_rich Low_complexity Low_complexity 1 43 0 1254 284 3 0 chr10 5212607 5212913 -140376375 + MST-int LTR MaLR 907 1213 -438 485 260 90 57 chr10 5212913 5213267 -140376021 - L1M4c LINE L1 -5213 1171 806 2886 61 0 0 chr10 5213285 5213629 -140375659 + LTR14A LTR ERVK 1 344 0 9019 77 4 2 chr10 5213629 5214771 -140374517 + HERVK14 LTR ERVK 1 1145 -4800 9785 187 46 30 chr10 5214874 5216933 -140372355 - Tigger1 DNA MER2_type -323 2095 4 1250 268 20 49 chr10 5216973 5217539 -140371749 + MLT2B3 LTR ERVL 1 504 -50 284 151 50 8 chr10 5217596 5217715 -140371573 + (TA)n Simple_repeat Simple_repeat 2 125 0 680 294 48 22 chr10 5217753 5218022 -140371266 + HERVL-B3 LTR ERVL 1 276 -5378 9643 30 4 0 chr10 5218024 5219147 -140370141 - L1P LINE L1 -1187 4959 3833 3099 24 0 3 chr10 5219145 5219521 -140369767 + L1P LINE L1 4984 5358 -788 * 7985 102 44 24 chr10 5219621 5220900 -140368388 - MER4-int LTR ERV1 -1457 5141 3837 342 286 122 7 chr10 5221274 5221334 -140367954 - L1ME4a LINE L1 -8 6113 6061 2690 156 7 23 chr10 5221334 5221770 -140367518 - LTR3 LTR ERVK 0 429 1 342 286 122 7 chr10 5221770 5221856 -140367432 - L1ME4a LINE L1 -60 6061 5950 399 88 118 0 chr10 5221887 5221955 -140367333 - L1PA15 LINE L1 -6 6159 6084 732 134 25 17 chr10 5221955 5222056 -140367232 + L1PA15 LINE L1 6044 6163 -2 1754 243 31 40 chr10 5222073 5222633 -140366655 + L1M4c LINE L1 1338 1901 -4481 2199 114 0 7 chr10 5222633 5222931 -140366357 + AluY SINE Alu 1 296 -15 1754 243 31 40 chr10 5222931 5223321 -140365967 + L1M4c LINE L1 1901 2375 -4007 1468 209 74 15 chr10 5223321 5223646 -140365642 - MER7A DNA MER2_type -1 345 4 1754 243 31 40 chr10 5223646 5223909 -140365379 + L1M4c LINE L1 2375 2639 -3743 1833 203 63 5 chr10 5223911 5224252 -140365036 - Tigger1 DNA MER2_type 0 2418 2051 216 0 0 0 chr10 5224252 5224276 -140365012 + (TAAAA)n Simple_repeat Simple_repeat 1 24 0 1833 203 63 5 chr10 5224276 5224313 -140364975 - Tigger1 DNA MER2_type -367 2051 2018 324 0 0 0 chr10 5224324 5224360 -140364928 + (CA)n Simple_repeat Simple_repeat 2 37 0 267 164 0 36 chr10 5224365 5224399 -140364889 + Ricksha DNA DNA 872 903 -2343 1658 232 95 13 chr10 5224399 5224851 -140364437 + ERVL LTR ERVL 2 490 -5274 490 209 39 39 chr10 5224853 5225006 -140364282 + L1M4 LINE L1 5099 5251 -895 920 185 40 0 chr10 5225488 5225661 -140363627 - AluJo SINE Alu -48 264 85 190 316 158 0 chr10 5226111 5226225 -140363063 - L3 LINE CR1 -85 1492 1361 230 247 124 22 chr10 5227091 5227180 -140362108 - MIR SINE MIR -77 185 88 511 178 22 0 chr10 5228555 5228645 -140360643 + MLT1D LTR MaLR 1 92 -413 765 206 75 45 chr10 5229394 5229661 -140359627 + ORSL DNA AcHobo 1 275 0 2396 94 0 0 chr10 5229710 5230009 -140359279 + AluSg SINE Alu 1 299 -11 263 27 0 27 chr10 5230303 5230340 -140358948 + (CA)n Simple_repeat Simple_repeat 1 36 0 461 171 0 0 chr10 5230345 5230415 -140358873 - MER8 DNA MER2_type 0 239 170 * 2077 124 14 40 chr10 5230404 5230758 -140358530 + Tigger2 DNA MER2_type 2273 2617 -101 22 0 0 0 chr10 5231674 5231696 -140357592 + AT_rich Low_complexity Low_complexity 1 22 0 193 268 18 0 chr10 5231709 5231765 -140357523 + MIR SINE MIR 154 210 -52 6708 93 13 3 chr10 5232313 5233296 -140355992 + L1PA12 LINE L1 5174 6168 0 1997 37 0 12 chr10 5233590 5233831 -140355457 - AluY SINE Alu 0 311 74 299 330 103 29 chr10 5234101 5234413 -140354875 - L3 LINE CR1 -614 963 629 1878 220 20 18 chr10 5235092 5235487 -140353801 + MSTD LTR MaLR 1 396 0 1481 211 14 31 chr10 5235687 5235913 -140353375 - MLT1A1 LTR MaLR -5 360 141 2431 163 48 5 chr10 5235913 5236325 -140352963 + MSTB1 LTR MaLR 1 430 -2 1481 211 14 31 chr10 5236325 5236453 -140352835 - MLT1A1 LTR MaLR -224 141 12 372 290 138 41 chr10 5236758 5237048 -140352240 + L2 LINE L2 2995 3312 -1 2414 35 0 18 chr10 5238228 5238541 -140350747 - AluY SINE Alu 0 308 1 1985 189 35 10 chr10 5238695 5239096 -140350192 - MSTB LTR MaLR -15 411 1 1433 109 104 0 chr10 5239577 5239798 -140349490 + L1M2 LINE L1 5562 5805 -495 367 226 21 0 chr10 5239786 5239879 -140349409 - L1 LINE L1 -1762 4384 4290 * 328 280 200 0 chr10 5239938 5240063 -140349225 + MLT1I LTR MaLR 249 398 -11 735 186 87 6 chr10 5240774 5240935 -140348353 + MER104 DNA Tc2 1 174 -6 542 167 83 19 chr10 5240961 5241069 -140348219 + MLT1C LTR MaLR 350 464 -3 516 271 0 0 chr10 5241906 5242076 -140347212 + (CA)n Simple_repeat Simple_repeat 2 171 0 2349 81 10 0 chr10 5242088 5242384 -140346904 - AluSq SINE Alu -14 299 1 2285 185 19 56 chr10 5242386 5242921 -140346367 + MLT2B1 LTR ERVL 6 520 0 2439 55 0 7 chr10 5243809 5244137 -140345151 - AluY SINE Alu 0 311 1 1970 147 0 10 chr10 5244151 5244443 -140344845 - AluJo SINE Alu -23 289 1 744 241 0 0 chr10 5246172 5246305 -140342983 - FLAM_A SINE Alu 0 133 1 1066 90 0 0 chr10 5246312 5246445 -140342843 - AluSg/x SINE Alu -16 294 162 587 165 0 0 chr10 5246447 5246532 -140342756 + AluJb SINE Alu 199 283 -29 1443 204 25 0 chr10 5247191 5247465 -140341823 + AluJb SINE Alu 1 281 -31 366 250 23 0 chr10 5248178 5248266 -140341022 + L1MC4 LINE L1 6614 6703 -1339 222 118 0 0 chr10 5248269 5248303 -140340985 + (TA)n Simple_repeat Simple_repeat 1 34 0 1786 146 3 14 chr10 5248303 5248590 -140340698 - AluSx SINE Alu -19 293 10 373 287 9 0 chr10 5249203 5249311 -140339977 + (CA)n Simple_repeat Simple_repeat 1 109 0 363 304 20 54 chr10 5250596 5250744 -140338544 - MIR3 SINE MIR -31 177 35 1964 125 6 19 chr10 5251190 5251503 -140337785 - THE1B LTR MaLR 0 364 56 214 324 0 14 chr10 5451533 5451604 -140137684 - L2 LINE L2 -679 2635 2566 1187 128 3 78 chr10 5451704 5452010 -140137278 - AluSx SINE Alu -19 293 11 380 250 59 52 chr10 5454296 5454432 -140134856 - MER63 DNA MER1_type -73 763 1 208 278 19 0 chr10 5454464 5454518 -140134770 - L2 LINE L2 -244 3069 3015 242 274 21 21 chr10 5454742 5454837 -140134451 + CT-rich Low_complexity Low_complexity 5 99 0 24 0 0 0 chr10 5455012 5455036 -140134252 + GC_rich Low_complexity Low_complexity 1 24 0 969 163 102 0 chr10 5455595 5455791 -140133497 + AluJo SINE Alu 87 302 -10 388 17 0 52 chr10 5456690 5456748 -140132540 - L1PA3 LINE L1 0 6155 6101 212 186 17 0 chr10 5457616 5457675 -140131613 + CT-rich Low_complexity Low_complexity 2 61 0 27 0 0 0 chr10 5457829 5457856 -140131432 + AT_rich Low_complexity Low_complexity 1 27 0 573 282 60 13 chr10 5457909 5458058 -140131230 - MIR SINE MIR -50 212 57 241 241 56 0 chr10 5458088 5458142 -140131146 - MIR SINE MIR -188 74 18 589 192 75 0 chr10 5459441 5459561 -140129727 + FLAM_A SINE Alu 8 136 -6 242 297 0 0 chr10 5459756 5459820 -140129468 - L2 LINE L2 -21 3292 3229 185 275 94 56 chr10 5459901 5460061 -140129227 + MIR SINE MIR 97 262 0 198 0 0 0 chr10 5460231 5460253 -140129035 + (T)n Simple_repeat Simple_repeat 1 22 0 31 0 0 0 chr10 5463118 5463149 -140126139 + AT_rich Low_complexity Low_complexity 1 31 0 189 0 0 0 chr10 5463547 5463568 -140125720 + (ATTG)n Simple_repeat Simple_repeat 3 23 0 1933 118 3 10 chr10 5464600 5464905 -140124383 - AluSc SINE Alu -1 308 6 1298 290 94 51 chr10 5465249 5466802 -140122486 - L1MEd LINE L1 -4641 1669 3 2680 226 79 50 chr10 5466992 5467712 -140121576 + L1M4b LINE L1 28 768 -6091 468 0 0 0 chr10 5469545 5469597 -140119691 + (CA)n Simple_repeat Simple_repeat 2 53 0 552 200 18 0 chr10 5470267 5470437 -140118851 + (TCCA)n Simple_repeat Simple_repeat 3 175 0 676 173 37 10 chr10 5470482 5470872 -140118416 + (TCCA)n Simple_repeat Simple_repeat 1 400 0 315 185 65 19 chr10 5470877 5470985 -140118303 + (CCCA)n Simple_repeat Simple_repeat 1 113 0 259 274 14 0 chr10 5471456 5471529 -140117759 + (CCCA)n Simple_repeat Simple_repeat 1 74 0 2031 121 7 0 chr10 5472511 5472808 -140116480 - AluSx SINE Alu -13 299 1 572 252 28 110 chr10 5476403 5476621 -140112667 - MIR SINE MIR -17 245 46 243 0 0 0 chr10 5476925 5476952 -140112336 + (A)n Simple_repeat Simple_repeat 1 27 0 2973 199 48 76 chr10 5477241 5478163 -140111125 + L1M4b LINE L1 743 1638 -5221 1756 238 70 9 chr10 5478525 5479085 -140110203 + L1M4b LINE L1 1616 2209 -4750 385 125 87 96 chr10 5479496 5479600 -140109688 - AluJ/FLAM SINE Alu -243 59 2 311 184 31 20 chr10 5482158 5482256 -140107032 + (TCCA)n Simple_repeat Simple_repeat 3 101 0 281 294 0 43 chr10 5482256 5482348 -140106940 - L2 LINE L2 0 3272 3185 811 177 0 0 chr10 5482645 5482775 -140106513 + FLAM_A SINE Alu 1 130 -3 561 306 44 20 chr10 5482882 5483125 -140106163 + MIR SINE MIR 3 248 -14 205 293 65 41 chr10 5483197 5483320 -140105968 - MIR SINE MIR -33 229 104 243 151 19 38 chr10 5483535 5483588 -140105700 + GA-rich Low_complexity Low_complexity 4 55 0 1518 147 66 7 chr10 5483963 5484235 -140105053 - AluJb SINE Alu -24 288 1 233 280 20 0 chr10 5484833 5484883 -140104405 + MER58A DNA MER1_type 1 51 -173 404 168 0 10 chr10 5484890 5484958 -140104330 - FLAM_A SINE Alu -11 122 66 343 140 0 18 chr10 5485115 5485172 -140104116 - FLAM_A SINE Alu -71 61 6 758 233 61 17 chr10 5485173 5485353 -140103935 + MER58A DNA MER1_type 37 224 0 281 167 0 0 chr10 5485362 5485410 -140103878 + L2 LINE L2 3263 3310 -3 237 162 0 0 chr10 5485463 5485500 -140103788 - MLT1A1 LTR MaLR 0 365 329 969 150 6 50 chr10 5485500 5485680 -140103608 + FAM SINE Alu 1 172 -13 1455 205 33 45 chr10 5485680 5486017 -140103271 - MLT1A1 LTR MaLR -32 333 1 376 292 116 13 chr10 5486233 5486404 -140102884 - MIR SINE MIR -43 165 2 194 291 50 92 chr10 5486701 5486842 -140102446 - MIR3 SINE MIR -71 137 3 2185 117 0 9 chr10 5486869 5487185 -140102103 - AluSq SINE Alu 0 313 1 411 213 11 21 chr10 5487396 5487490 -140101798 - MER5B DNA MER1_type -85 93 1 230 211 0 58 chr10 5487490 5487525 -140101763 - MIR3 SINE MIR -51 157 126 409 285 18 34 chr10 5488809 5488992 -140100296 - MIR SINE MIR -79 129 8 22 0 0 0 chr10 5489737 5489759 -140099529 + AT_rich Low_complexity Low_complexity 1 22 0 727 286 64 58 chr10 5491173 5491664 -140097624 + L1MC5 LINE L1 6414 6884 -924 189 94 0 0 chr10 5491753 5491785 -140097503 + (TTCC)n Simple_repeat Simple_repeat 4 35 0 1589 173 22 0 chr10 5491786 5492063 -140097225 - AluJo SINE Alu -21 291 9 8435 236 32 18 chr10 5492072 5492356 -140096932 - L1MCa LINE L1 -1509 4917 4638 1746 104 8 4 chr10 5492356 5492605 -140096683 - AluSg SINE Alu -14 296 47 8435 236 32 18 chr10 5492605 5494678 -140094610 - L1MCa LINE L1 -1788 4638 2517 3219 144 19 0 chr10 5494678 5495193 -140094095 + L1PA16 LINE L1 5642 6166 0 8435 236 32 18 chr10 5495193 5495437 -140093851 - L1MCa LINE L1 -3909 2517 2278 2347 163 29 51 chr10 5495441 5495696 -140093592 - L1MCa LINE L1 -4234 2192 1933 2075 110 7 3 chr10 5495696 5495987 -140093301 + AluSq SINE Alu 1 292 -21 2347 163 29 51 chr10 5495987 5496006 -140093282 - L1MCa LINE L1 -4493 1933 1915 2067 117 0 13 chr10 5496006 5496305 -140092983 + AluSq SINE Alu 1 295 -18 2347 163 29 51 chr10 5496305 5496520 -140092768 - L1MCa LINE L1 -4511 1915 1713 488 172 20 0 chr10 5496514 5496613 -140092675 - L1MCa LINE L1 -5381 1045 945 * 1722 115 33 62 chr10 5496614 5496918 -140092370 - AluSq SINE Alu -13 300 6 1300 142 0 13 chr10 5497065 5497297 -140091991 + AluSq SINE Alu 85 313 0 4022 143 9 6 chr10 5498309 5498960 -140090328 + MER39B LTR ERV1 1 653 0 2139 77 46 82 chr10 5499253 5499481 -140089807 + L1MA2 LINE L1 5927 6137 -167 2002 131 3 0 chr10 5499481 5499772 -140089516 + AluSx SINE Alu 1 292 -20 2139 77 46 82 chr10 5499772 5499935 -140089353 + L1MA2 LINE L1 6137 6304 0 2217 128 32 11 chr10 5500027 5500403 -140088885 - MLT1B LTR MaLR -4 386 3 1797 134 44 103 chr10 5500446 5500654 -140088634 - THE1B LTR MaLR 0 364 188 2187 119 0 0 chr10 5500654 5500966 -140088322 + AluSq SINE Alu 1 312 -1 1797 134 44 103 chr10 5500966 5501144 -140088144 - THE1B LTR MaLR -176 188 1 222 322 76 66 chr10 5501244 5501533 -140087755 - L2 LINE L2 -561 2753 2462 296 354 39 8 chr10 5501769 5501896 -140087392 + MIR SINE MIR 99 229 -33 227 243 13 13 chr10 5503948 5504040 -140085248 - MIR SINE MIR -61 147 93 1595 199 112 23 chr10 5504565 5504641 -140084647 + MLT1D LTR MaLR 29 97 -408 2253 114 75 41 chr10 5504641 5505053 -140084235 + MSTC LTR MaLR 1 426 -2 1595 199 112 23 chr10 5505053 5505412 -140083876 + MLT1D LTR MaLR 97 503 -2 378 210 25 0 chr10 5505545 5505626 -140083662 - MIR SINE MIR -151 111 29 180 376 30 20 chr10 5505746 5505847 -140083441 + MIR SINE MIR 59 160 -102 445 311 202 8 chr10 5506118 5506475 -140082813 + L3 LINE CR1 1122 1547 -30 312 282 36 0 chr10 5507020 5507130 -140082158 + MER5A DNA MER1_type 74 187 -2 295 263 116 11 chr10 5508330 5508425 -140080863 - MIR SINE MIR 0 262 158 259 218 218 11 chr10 5510869 5510956 -140078332 - L2 LINE L2 -269 3044 2940 416 60 15 60 chr10 5511061 5511128 -140078160 + Alu SINE Alu 232 295 -17 21 36 0 0 chr10 5511854 5511882 -140077406 + AT_rich Low_complexity Low_complexity 1 28 0 419 177 0 0 chr10 5514358 5514437 -140074851 + LTR41 LTR ERVL 57 135 -638 2384 113 0 3 chr10 5514948 5515257 -140074031 + AluSx SINE Alu 1 308 -4 1964 152 11 55 chr10 5516164 5516332 -140072956 + MLT1A1 LTR MaLR 1 175 -190 2427 97 0 3 chr10 5516332 5516642 -140072646 + AluSx SINE Alu 1 309 -3 1964 152 11 55 chr10 5516642 5516855 -140072433 + MLT1A1 LTR MaLR 175 365 0 337 265 32 91 chr10 5516865 5517084 -140072204 - MLT1L LTR MaLR -194 391 112 2194 105 9 6 chr10 5517216 5517547 -140071741 + THE1B LTR MaLR 1 427 -30 691 175 0 113 chr10 5517557 5517717 -140071571 + Tigger1 DNA MER2_type 1 142 -2276 1085 184 14 0 chr10 5517738 5517945 -140071343 + Tigger1 DNA MER2_type 2209 2418 0 423 0 0 0 chr10 5519663 5519710 -140069578 + (TG)n Simple_repeat Simple_repeat 2 48 0 227 244 167 58 chr10 5519889 5520045 -140069243 + MER115 DNA AcHobo 140 312 -381 187 335 238 19 chr10 5520515 5521553 -140067735 - L2 LINE L2 -442 2872 1608 299 327 121 18 chr10 5521774 5521939 -140067349 - MIR3 SINE MIR -23 185 4 222 355 59 67 chr10 5522746 5523137 -140066151 - L2 LINE L2 -32 3240 2853 2413 85 0 19 chr10 5523140 5523457 -140065831 - AluY SINE Alu 0 311 1 929 209 29 9 chr10 5526626 5526836 -140062452 + MER41B LTR ERV1 422 635 0 238 291 90 0 chr10 5526909 5527031 -140062257 - MIR SINE MIR -66 142 19 2535 113 53 5 chr10 5527190 5527605 -140061683 + LTR49 LTR ERV1 1 435 -160 775 168 81 23 chr10 5527996 5528169 -140061119 + LTR49 LTR ERV1 413 595 0 183 268 71 0 chr10 5528320 5528376 -140060912 - L2 LINE L2 -5 3308 3249 2243 116 0 3 chr10 5528504 5528805 -140060483 + AluSx SINE Alu 1 300 -12 1401 132 182 23 chr10 5528867 5529125 -140060163 + AluJb SINE Alu 2 300 -2 2360 121 0 0 chr10 5529772 5530085 -140059203 - AluSq SINE Alu 0 313 1 1662 178 3 39 chr10 5530087 5530396 -140058892 - AluJb SINE Alu -9 303 6 2265 131 0 0 chr10 5530566 5530878 -140058410 - AluSx SINE Alu 0 312 1 636 293 120 10 chr10 5530933 5531117 -140058171 + L2 LINE L2 2044 2206 -1108 1745 189 7 0 chr10 5531117 5531413 -140057875 - AluJo SINE Alu -14 298 1 636 293 120 10 chr10 5531413 5531528 -140057760 + L2 LINE L2 2206 2376 -938 1019 128 7 0 chr10 5531541 5531682 -140057606 + AluSq/x SINE Alu 1 142 -171 1614 135 8 4 chr10 5531816 5532061 -140057227 + AluSg/x SINE Alu 66 311 -1 2059 152 3 18 chr10 5532230 5532572 -140056716 - MER1B DNA MER1_type 0 337 1 21 0 0 0 chr10 5532848 5532869 -140056419 + AT_rich Low_complexity Low_complexity 1 21 0 685 328 109 40 chr10 5533166 5533562 -140055726 + L3 LINE CR1 73 495 -1082 300 247 43 54 chr10 5533635 5533728 -140055560 - L2 LINE L2 -2 3311 3220 334 267 81 34 chr10 5533755 5533958 -140055330 + MIR SINE MIR 18 236 -26 798 325 153 13 chr10 5534069 5534592 -140054696 + L3 LINE CR1 768 1363 -214 188 61 61 0 chr10 5538067 5538100 -140051188 + (CAAA)n Simple_repeat Simple_repeat 2 36 0 216 97 0 0 chr10 5538920 5538951 -140050337 + (GA)n Simple_repeat Simple_repeat 2 32 0 24 32 0 0 chr10 5539386 5539417 -140049871 + AT_rich Low_complexity Low_complexity 1 31 0 21 0 0 0 chr10 5539782 5539803 -140049485 + AT_rich Low_complexity Low_complexity 1 21 0 203 243 225 45 chr10 5541724 5541835 -140047453 + MIR3 SINE MIR 68 198 -10 229 155 31 103 chr10 5543300 5543397 -140045891 + L2 LINE L2 1636 1725 -1589 1968 145 0 38 chr10 5543410 5543727 -140045561 - AluSx SINE Alu -7 305 1 189 301 108 60 chr10 5544556 5544722 -140044566 + L2 LINE L2 2968 3141 -131 475 261 34 8 chr10 5546081 5546200 -140043088 + L2 LINE L2 3191 3312 -1 2073 125 3 0 chr10 5546492 5546789 -140042499 - AluSg SINE Alu -12 298 1 745 149 51 93 chr10 5548370 5548445 -140040843 + ORSL DNA AcHobo 42 119 -156 1764 132 106 0 chr10 5548445 5548710 -140040578 - AluSx SINE Alu -19 293 1 745 149 51 93 chr10 5548710 5548848 -140040440 + ORSL DNA AcHobo 119 246 -29 709 249 24 6 chr10 5548882 5549047 -140040241 + MER5B DNA MER1_type 8 175 -3 2134 143 13 28 chr10 5549342 5549389 -140039899 - L1MB3 LINE L1 -28 6155 6109 2369 125 37 6 chr10 5549389 5549742 -140039546 + THE1B LTR MaLR 1 364 0 2134 143 13 28 chr10 5549742 5550087 -140039201 - L1MB3 LINE L1 -74 6109 5769 291 268 42 0 chr10 5550093 5550164 -140039124 + L2 LINE L2 3216 3289 -24 1803 195 0 0 chr10 5550688 5550985 -140038303 - AluJo SINE Alu -8 304 8 892 201 6 11 chr10 5551042 5551221 -140038067 - AluJo SINE Alu -91 221 44 201 209 47 0 chr10 5552080 5552123 -140037165 + (CATG)n Simple_repeat Simple_repeat 3 47 0 24 0 0 0 chr10 5552204 5552228 -140037060 + AT_rich Low_complexity Low_complexity 1 24 0 3422 176 39 41 chr10 5552895 5553514 -140035774 + L1 LINE L1 4513 5130 -1038 2171 133 0 0 chr10 5553514 5553799 -140035489 + AluSx SINE Alu 1 315 0 222 0 0 33 chr10 5553799 5553829 -140035459 + (CAAAA)n Simple_repeat Simple_repeat 2 30 0 3422 176 39 41 chr10 5553829 5554126 -140035162 + L1 LINE L1 5130 5426 -742 300 235 0 29 chr10 5554128 5554196 -140035092 - L1ME LINE L1 -287 5834 5769 633 221 61 22 chr10 5554206 5554387 -140034901 + LTR41 LTR ERVL 1 188 -585 252 265 8 51 chr10 5554798 5554915 -140034373 + LTR41 LTR ERVL 656 767 -6 1176 100 0 0 chr10 5555114 5555264 -140034024 - AluSg/x SINE Alu -9 301 152 303 327 73 27 chr10 5555274 5555424 -140033864 - MIR SINE MIR -63 199 43 560 256 122 99 chr10 5555942 5556147 -140033141 + MLT1J LTR MaLR 6 205 -306 2475 86 3 0 chr10 5556147 5556448 -140032840 - AluSg SINE Alu -8 302 1 560 256 122 99 chr10 5556448 5556735 -140032553 + MLT1J LTR MaLR 205 509 -2 430 278 28 45 chr10 5556779 5556955 -140032333 + MIR SINE MIR 35 207 -55 366 234 170 18 chr10 5557388 5557559 -140031729 + MIR SINE MIR 44 240 -22 3339 171 20 12 chr10 5557564 5557880 -140031408 + L1MCa LINE L1 202 514 -5912 1662 151 80 37 chr10 5557880 5557927 -140031361 + MER47A DNA MER2_type 1 45 -2278 2309 112 0 13 chr10 5557927 5558241 -140031047 - AluSx SINE Alu -2 310 1 1662 151 80 37 chr10 5558241 5558544 -140030744 + MER47A DNA MER2_type 45 366 0 3339 171 20 12 chr10 5558544 5558876 -140030412 + L1MCa LINE L1 514 855 -5571 474 268 140 0 chr10 5559058 5559222 -140030066 + MIR SINE MIR 2 188 -74 305 349 0 0 chr10 5559324 5559433 -140029855 - MIR SINE MIR -69 139 31 2355 106 0 6 chr10 5559530 5559842 -140029446 - AluSg SINE Alu 0 310 1 1056 23 78 0 chr10 5560361 5560489 -140028799 - MER85 DNA T2_type -1 138 1 248 265 15 0 chr10 5560656 5560724 -140028564 + MIR SINE MIR 76 144 -64 233 306 54 18 chr10 5560996 5561107 -140028181 - L2 LINE L2 -509 2805 2691 393 244 0 0 chr10 5561963 5562041 -140027247 + MER21B LTR ERV1 13 90 -773 1803 216 91 93 chr10 5562063 5562300 -140026988 + MER21B LTR ERV1 19 255 -608 1464 200 11 0 chr10 5562300 5562565 -140026723 + AluJb SINE Alu 16 283 -29 1803 216 91 93 chr10 5562565 5563104 -140026184 + MER21B LTR ERV1 255 794 -69 250 337 125 16 chr10 5563271 5563455 -140025833 + L3 LINE CR1 1303 1506 -71 346 300 36 36 chr10 5563514 5563654 -140025634 + MIR3 SINE MIR 42 181 -27 1837 183 7 13 chr10 5563654 5563954 -140025334 - AluJb SINE Alu -14 298 1 1193 192 9 18 chr10 5565306 5565525 -140023763 - AluJo SINE Alu -95 217 1 1518 204 47 6 chr10 5565553 5565892 -140023396 - MLT1A1 LTR MaLR 0 365 13 2211 130 33 25 chr10 5566640 5567001 -140022287 - THE1B LTR MaLR 0 364 1 216 235 0 0 chr10 5569359 5569427 -140019861 + CT-rich Low_complexity Low_complexity 1 68 0 352 336 22 0 chr10 5570247 5570381 -140018907 - MIR3 SINE MIR -52 156 20 346 179 64 0 chr10 5570652 5570730 -140018558 - Charlie5 DNA MER1_type -2503 109 27 183 100 0 0 chr10 5571817 5571847 -140017441 + (A)n Simple_repeat Simple_repeat 1 30 0 2018 104 4 0 chr10 5573195 5573464 -140015824 - AluSc SINE Alu -39 270 1 22 0 0 0 chr10 5575487 5575509 -140013779 + AT_rich Low_complexity Low_complexity 1 22 0 527 184 0 10 chr10 5576772 5576870 -140012418 + FLAM_A SINE Alu 35 131 -11 243 0 0 0 chr10 5577421 5577448 -140011840 + (T)n Simple_repeat Simple_repeat 1 27 0 1262 169 21 104 chr10 5580495 5580750 -140008538 + MER66A-int LTR ERV1 3224 3499 -3177 2486 113 19 19 chr10 5580750 5581114 -140008174 + THE1B LTR MaLR 1 364 0 1262 169 21 104 chr10 5581114 5581481 -140007807 + MER66A-int LTR ERV1 3499 4437 -2239 462 194 78 10 chr10 5581481 5581584 -140007704 + MER4D LTR ERV1 52 161 -711 957 180 71 38 chr10 5581672 5581883 -140007405 + MER66A-int LTR ERV1 4611 4828 -1848 1916 158 11 29 chr10 5581977 5582042 -140007246 + MER66A-int LTR ERV1 6334 6399 -277 2358 95 7 0 chr10 5582042 5582338 -140006950 - AluSp SINE Alu -12 301 4 1916 158 11 29 chr10 5582338 5582621 -140006667 + MER66A-int LTR ERV1 6399 6676 0 1131 201 139 37 chr10 5582659 5583048 -140006240 + MER66A LTR ERV1 97 428 -50 452 173 109 18 chr10 5583365 5583475 -140005813 + MER53 DNA DNA 1 120 -69 328 206 244 23 chr10 5583381 5583512 -140005776 - MER53 DNA DNA -7 182 23 * 312 255 60 87 chr10 5584652 5584836 -140004452 + MIR SINE MIR 68 246 -16 186 231 0 92 chr10 5585574 5585639 -140003649 - L3 LINE CR1 -710 867 809 528 204 148 28 chr10 5587140 5587282 -140002006 - MIR SINE MIR -91 171 13 205 302 94 19 chr10 5588572 5588678 -140000610 + L2 LINE L2 3200 3313 0 449 248 50 8 chr10 5589358 5589479 -139999809 - L2 LINE L2 -11 3261 3136 576 266 130 11 chr10 5590409 5590593 -139998695 - MIR SINE MIR -53 209 4 6400 24 0 0 chr10 5594579 5595556 -139993732 - L1PA3 LINE L1 -141 6014 5038 2079 154 59 77 chr10 5595731 5596005 -139993283 - MER31A LTR ERV1 0 485 222 3421 121 31 13 chr10 5596005 5596558 -139992730 - L1MA2 LINE L1 -1 6303 5741 2079 154 59 77 chr10 5596558 5596777 -139992511 - MER31A LTR ERV1 -263 222 1 331 325 36 24 chr10 5597992 5598158 -139991130 + (CATG)n Simple_repeat Simple_repeat 1 168 0 * 379 385 0 6 chr10 5598050 5598229 -139991059 + (CA)n Simple_repeat Simple_repeat 1 178 0 416 363 18 6 chr10 5598894 5599062 -139990226 - MIR SINE MIR -69 193 24 532 227 81 86 chr10 5599199 5599903 -139989385 + L1MC5 LINE L1 6780 7670 -291 2256 118 0 0 chr10 5599903 5600199 -139989089 - AluSx SINE Alu -15 297 2 532 227 81 86 chr10 5600199 5600430 -139988858 + L1MC5 LINE L1 7670 7901 -60 316 224 17 60 chr10 5600723 5600839 -139988449 + L2 LINE L2 2985 3095 -177 256 241 218 30 chr10 5602476 5602609 -139986679 - MIR3 SINE MIR -41 167 10 214 167 0 0 chr10 5604065 5604101 -139985187 + (TTCA)n Simple_repeat Simple_repeat 1 36 0 201 0 100 0 chr10 5604304 5604334 -139984954 + T-rich Low_complexity Low_complexity 3 180 0 1990 126 7 10 chr10 5604334 5604628 -139984660 - AluSx SINE Alu -1 331 10 5132 102 10 0 chr10 5604628 5605340 -139983948 - LTR30 LTR ERV1 -2 720 2 674 301 74 7 chr10 5606495 5606900 -139982388 + L1M4 LINE L1 3344 3775 -2371 388 308 61 35 chr10 5607655 5607853 -139981435 + MIR3 SINE MIR 3 205 -3 859 202 12 6 chr10 5614611 5614784 -139974504 + FAM SINE Alu 1 174 -1 351 0 0 0 chr10 5616496 5616535 -139972753 + (TAA)n Simple_repeat Simple_repeat 2 40 0 23 33 0 0 chr10 5616993 5617023 -139972265 + AT_rich Low_complexity Low_complexity 1 30 0 204 67 0 0 chr10 5622906 5622936 -139966352 + (TAAA)n Simple_repeat Simple_repeat 3 32 0 4109 148 21 83 chr10 5625504 5625831 -139963457 - LTR39 LTR ERV1 -29 754 408 2092 109 0 6 chr10 5625831 5626142 -139963146 + AluSx SINE Alu 1 309 -3 4109 148 21 83 chr10 5626142 5626534 -139962754 - LTR39 LTR ERV1 -375 408 88 2016 116 7 3 chr10 5626534 5626828 -139962460 - AluSx SINE Alu -17 295 1 4109 148 21 83 chr10 5626828 5626911 -139962377 - LTR39 LTR ERV1 -695 88 1 1982 121 0 7 chr10 5627786 5628075 -139961213 + AluSx SINE Alu 1 287 -25 253 205 110 16 chr10 5629028 5629140 -139960148 - L1ME4a LINE L1 -84 6025 1141 1957 159 43 0 chr10 5629178 5629504 -139959784 + MER47A DNA MER2_type 27 366 0 295 289 112 48 chr10 5629508 5629658 -139959630 - L1ME4a LINE L1 -223 5898 5732 1914 119 3 17 chr10 5629658 5629952 -139959336 - AluSx SINE Alu -22 290 1 295 289 112 48 chr10 5629952 5629988 -139959300 - L1ME4a LINE L1 -389 5732 5700 216 111 0 0 chr10 5630067 5630103 -139959185 + (TTCC)n Simple_repeat Simple_repeat 2 37 0 272 243 119 89 chr10 5630128 5630330 -139958958 - MLT1J LTR MaLR -103 408 201 2104 179 6 6 chr10 5631484 5631847 -139957441 - MLT1A1 LTR MaLR 0 365 3 1842 193 63 30 chr10 5632239 5632665 -139956623 - L1MD1 LINE L1 0 6242 5803 233 298 134 72 chr10 5632665 5632927 -139956361 + L2 LINE L2 2688 2965 -349 504 287 126 18 chr10 5632931 5633154 -139956134 - MIR SINE MIR 0 262 16 1524 163 62 24 chr10 5633486 5633774 -139955514 - AluJo SINE Alu -13 299 1 256 286 37 55 chr10 5633788 5633879 -139955409 - L1MD1 LINE L1 -382 5739 5648 2126 116 0 0 chr10 5633879 5634180 -139955108 - AluSx SINE Alu -11 301 1 256 286 37 55 chr10 5634180 5634324 -139954964 - L1MD1 LINE L1 -473 5648 5506 816 188 0 7 chr10 5634385 5634529 -139954759 + MLT1D LTR MaLR 363 505 0 26 0 0 0 chr10 5634790 5634816 -139954472 + AT_rich Low_complexity Low_complexity 1 26 0 198 323 62 21 chr10 5635765 5635861 -139953427 + L2 LINE L2 3199 3298 -15 1987 146 0 3 chr10 5636003 5636312 -139952976 + AluSx SINE Alu 1 308 -4 378 42 0 0 chr10 5636702 5636750 -139952538 + (CA)n Simple_repeat Simple_repeat 2 49 0 611 152 163 20 chr10 5637156 5637328 -139951960 - MER66A LTR ERV1 -261 341 97 239 250 0 0 chr10 5637669 5637721 -139951567 - MIR SINE MIR -139 123 72 1555 178 93 77 chr10 5637946 5638413 -139950875 + MER66A LTR ERV1 97 478 0 7682 198 71 44 chr10 5638589 5639096 -139950192 + MER66A-int LTR ERV1 197 689 -5987 1530 172 59 0 chr10 5639096 5639369 -139949919 - AluSg SINE Alu -21 289 1 7682 198 71 44 chr10 5639369 5640236 -139949052 + MER66A-int LTR ERV1 689 1635 -5041 1572 171 20 7 chr10 5640236 5640529 -139948759 + AluJo SINE Alu 1 297 -15 7682 198 71 44 chr10 5640529 5641021 -139948267 + MER66A-int LTR ERV1 1635 2113 -4563 4374 211 39 19 chr10 5641131 5642020 -139947268 + MER66A-int LTR ERV1 2342 3248 -3428 318 176 0 40 chr10 5642010 5642084 -139947204 + LTR38-int LTR ERV1 1407 1477 -309 * 21 36 0 0 chr10 5642127 5642155 -139947133 + AT_rich Low_complexity Low_complexity 1 28 0 305 279 56 50 chr10 5742611 5742790 -139846498 + MIR3 SINE MIR 23 202 -6 696 127 0 0 chr10 5743950 5744060 -139845228 + (CA)n Simple_repeat Simple_repeat 1 110 0 572 210 25 0 chr10 5745292 5745537 -139843751 + GA-rich Low_complexity Low_complexity 1 251 0 253 239 72 0 chr10 5745642 5745741 -139843547 - L1ME LINE L1 -516 5605 5497 436 192 67 50 chr10 5746220 5746340 -139842948 - MER20 DNA MER1_type -50 169 48 192 139 116 0 chr10 5746463 5746506 -139842782 - L2 LINE L2 0 3272 3225 1463 166 101 18 chr10 5748638 5748915 -139840373 - AluJb SINE Alu -12 300 1 1756 99 0 0 chr10 5748935 5749158 -139840130 - AluSx SINE Alu -89 223 1 566 154 135 58 chr10 5749174 5749330 -139839958 - MER2 DNA MER2_type -135 210 43 237 196 43 43 chr10 5750146 5750238 -139839050 - L1ME4a LINE L1 -74 6047 5956 1423 132 194 3 chr10 5750591 5750879 -139838409 + MER7A DNA MER2_type 5 345 -1 323 261 137 6 chr10 5751181 5751342 -139837946 + MIR SINE MIR 44 225 -37 1748 157 15 0 chr10 5752364 5752638 -139836650 - AluJo SINE Alu -21 291 14 239 288 41 62 chr10 5754506 5754652 -139834636 - MARNA DNA Mariner -24 562 420 1437 198 16 39 chr10 5754899 5755207 -139834081 - AluJo SINE Alu -11 301 1 2115 108 0 3 chr10 5755326 5755612 -139833676 - AluSx SINE Alu -20 292 8 2643 45 0 13 chr10 5755835 5756148 -139833140 - AluY SINE Alu -2 309 1 316 118 0 0 chr10 5756381 5756432 -139832856 + Alu SINE Alu 251 301 -1 611 201 30 0 chr10 5756440 5756574 -139832714 - L1MB5 LINE L1 -46 6128 5991 212 296 34 0 chr10 5756585 5756673 -139832615 - L2 LINE L2 -34 3238 3148 2101 88 50 0 chr10 5756743 5757026 -139832262 + AluSg SINE Alu 1 297 -13 490 309 0 8 chr10 5757066 5757192 -139832096 - MIR SINE MIR -91 171 47 1110 198 64 28 chr10 5757194 5757358 -139831930 - L1MB5 LINE L1 -189 5985 5828 2335 68 20 0 chr10 5757358 5757650 -139831638 - AluY SINE Alu -13 298 1 1110 198 64 28 chr10 5757650 5757847 -139831441 - L1MB5 LINE L1 -346 5828 5611 1032 199 38 4 chr10 5757847 5758083 -139831205 - AluJb SINE Alu -5 307 64 2082 126 0 11 chr10 5758204 5758524 -139830764 + AluSx SINE Alu 1 317 0 730 201 65 15 chr10 5758608 5758844 -139830444 + MLT1G LTR MaLR 247 590 0 22 0 0 0 chr10 5758965 5758987 -139830301 + AT_rich Low_complexity Low_complexity 1 22 0 2275 99 20 0 chr10 5758992 5759295 -139829993 + AluSq SINE Alu 1 309 -4 1694 121 16 39 chr10 5759309 5759565 -139829723 + AluSx SINE Alu 3 252 -60 286 118 0 0 chr10 5759739 5759790 -139829498 + AluSx SINE Alu 251 301 0 297 308 55 55 chr10 5760054 5760366 -139828922 - L1ME LINE L1 -5652 418 107 1708 183 7 0 chr10 5760393 5760672 -139828616 - AluJb SINE Alu -23 289 9 1145 151 5 15 chr10 5760805 5761004 -139828284 - MER50-int LTR ERV1 -6724 481 285 215 269 0 0 chr10 5761180 5761232 -139828056 + L2 LINE L2 2599 2650 -664 2453 85 3 0 chr10 5761232 5761537 -139827751 - AluSp SINE Alu -7 306 1 2103 127 6 16 chr10 5761545 5761860 -139827428 - AluSx SINE Alu 0 312 1 215 270 132 78 chr10 5762013 5762217 -139827071 + L2 LINE L2 2856 3070 -243 633 165 1 46 chr10 5762223 5762368 -139826920 + L1MA6 LINE L1 5823 5956 -210 2368 97 0 0 chr10 5762373 5762663 -139826625 + AluSg SINE Alu 18 307 -3 436 190 123 43 chr10 5763566 5763819 -139825469 + L1ME LINE L1 530 802 -5268 2167 103 13 0 chr10 5763917 5764217 -139825071 + AluSc SINE Alu 1 304 -5 250 115 97 0 chr10 5764217 5764276 -139825012 + AluSg/x SINE Alu 132 189 -111 2338 233 88 63 chr10 5764482 5765535 -139823753 + L1M4 LINE L1 4005 5030 -1116 2281 91 7 0 chr10 5765535 5765833 -139823455 + AluY SINE Alu 1 300 -11 2338 233 88 63 chr10 5765833 5765921 -139823367 + L1M4 LINE L1 5030 5114 -1032 2042 134 7 3 chr10 5765921 5766211 -139823077 + AluSx SINE Alu 1 291 -21 2338 233 88 63 chr10 5766211 5766276 -139823012 + L1M4 LINE L1 5114 5242 -904 5432 65 9 9 chr10 5766449 5767170 -139822118 - L1PA7 LINE L1 -96 6058 5335 2136 116 0 3 chr10 5767170 5767454 -139821834 - AluSx SINE Alu -28 284 2 5432 65 9 9 chr10 5767454 5767472 -139821816 - L1PA7 LINE L1 -818 5336 5319 24 0 0 0 chr10 5768986 5769010 -139820278 + AT_rich Low_complexity Low_complexity 1 24 0 2201 121 19 10 chr10 5769079 5769386 -139819902 + AluSq SINE Alu 1 310 -3 1796 150 4 4 chr10 5770269 5770536 -139818752 + AluSx SINE Alu 1 267 -45 2258 125 0 0 chr10 5770808 5771112 -139818176 - AluSx SINE Alu -4 308 5 1378 150 13 13 chr10 5771277 5771504 -139817784 + AluJb SINE Alu 25 251 -61 180 182 0 0 chr10 5771771 5771804 -139817484 - L3 LINE CR1 -1348 229 197 1323 163 30 49 chr10 5773875 5774139 -139815149 - AluJo SINE Alu -14 298 40 207 301 68 14 chr10 5774732 5774805 -139814483 - MIR3 SINE MIR -20 188 112 351 237 11 0 chr10 5775177 5775270 -139814018 + L1M3 LINE L1 4463 4556 -1590 2113 197 115 47 chr10 5775313 5775793 -139813495 + L1M3 LINE L1 4669 5115 -1068 777 174 0 36 chr10 5775793 5775931 -139813357 + FLAM_A SINE Alu 1 133 0 2113 197 115 47 chr10 5775931 5776077 -139813211 + L1M3 LINE L1 5115 5250 -933 2168 109 14 0 chr10 5776077 5776370 -139812918 + AluSp SINE Alu 1 297 -16 2113 197 115 47 chr10 5776370 5776609 -139812679 + L1M3 LINE L1 5250 5603 -580 410 135 189 0 chr10 5776718 5776792 -139812496 - AluSg1 SINE Alu -220 89 2 673 179 179 21 chr10 5777161 5777176 -139812112 - AluJo SINE Alu -143 169 158 1649 169 3 44 chr10 5777176 5777472 -139811816 - AluJb SINE Alu -8 304 21 673 179 179 21 chr10 5777472 5777522 -139811766 - AluJo SINE Alu -154 158 117 186 43 0 0 chr10 5777522 5777545 -139811743 + (GTCTG)n Simple_repeat Simple_repeat 5 27 0 673 179 179 21 chr10 5777545 5777623 -139811665 - AluJo SINE Alu -195 117 2 2270 104 0 31 chr10 5777632 5777949 -139811339 - AluSg1 SINE Alu -2 307 1 490 208 2 97 chr10 5777980 5778055 -139811233 - L1ME2 LINE L1 -1 6165 6110 2214 107 0 0 chr10 5778055 5778336 -139810952 - AluSx SINE Alu -16 296 16 490 208 2 97 chr10 5778336 5778433 -139810855 - L1ME2 LINE L1 -56 6110 6005 2272 95 17 3 chr10 5778467 5778763 -139810525 - AluSx SINE Alu -12 300 1 198 0 0 0 chr10 5778781 5778803 -139810485 + (TTTG)n Simple_repeat Simple_repeat 2 23 0 190 240 60 0 chr10 5778803 5778853 -139810435 - L2 LINE L2 -78 3235 3183 669 106 7 78 chr10 5778910 5778930 -139810358 + L1M LINE L1 5266 5286 -894 2008 102 42 7 chr10 5778930 5779213 -139810075 + AluSx SINE Alu 1 293 -19 669 106 7 78 chr10 5779213 5779334 -139809954 + L1M LINE L1 5286 5397 -783 1413 147 0 22 chr10 5779435 5779667 -139809621 - AluJb SINE Alu -85 227 1 258 155 52 0 chr10 5779668 5779726 -139809562 + L1MB5 LINE L1 6114 6174 0 298 341 82 16 chr10 5780724 5780906 -139808382 - MIR SINE MIR -16 246 53 224 120 20 40 chr10 5780939 5780989 -139808299 + A-rich Low_complexity Low_complexity 4 52 0 1862 148 173 0 chr10 5781413 5781778 -139807510 - MSTA LTR MaLR 0 428 1 1205 36 0 7 chr10 5782001 5782138 -139807150 + AluSg SINE Alu 2 137 -173 1658 50 0 15 chr10 5782144 5782385 -139806903 + AluY SINE Alu 86 323 0 2039 150 0 3 chr10 5782388 5782695 -139806593 + AluSx SINE Alu 1 306 -6 446 161 0 0 chr10 5782697 5782778 -139806510 + L1M LINE L1 5312 5392 -788 2039 113 3 7 chr10 5782793 5783099 -139806189 + AluSx SINE Alu 1 305 0 180 0 0 0 chr10 5783413 5783433 -139805855 + (TA)n Simple_repeat Simple_repeat 2 21 0 1751 184 0 3 chr10 5783761 5784054 -139805234 + AluJb SINE Alu 3 294 -18 2092 142 0 0 chr10 5784712 5785008 -139804280 - AluSx SINE Alu -14 298 3 2315 99 10 0 chr10 5785013 5785316 -139803972 - AluSx SINE Alu -6 306 1 878 178 18 6 chr10 5785318 5785481 -139803807 - AluJb SINE Alu -17 295 131 2403 89 10 0 chr10 5786308 5786611 -139802677 + AluSp SINE Alu 1 306 -7 1858 122 3 88 chr10 5786621 5786760 -139802528 + AluSx SINE Alu 1 99 -213 2223 105 7 3 chr10 5786760 5787054 -139802234 + AluSg SINE Alu 1 295 -15 1858 122 3 88 chr10 5787054 5787234 -139802054 + AluSx SINE Alu 99 293 -19 459 210 107 114 chr10 5787844 5788190 -139801098 + MLT1F LTR MaLR 166 555 0 209 311 0 0 chr10 5788190 5788251 -139801037 - L2 LINE L2 -819 2495 2435 2125 116 3 0 chr10 5788271 5788578 -139800710 + AluSq SINE Alu 1 308 0 1680 185 3 10 chr10 5788839 5789141 -139800147 + AluJb SINE Alu 1 300 -12 303 349 128 45 chr10 5789202 5789655 -139799633 - L2 LINE L2 -4 3268 2739 2380 90 13 0 chr10 5789655 5789955 -139799333 - AluSx SINE Alu -8 304 1 303 349 128 45 chr10 5789955 5790133 -139799155 - L2 LINE L2 -533 2739 2577 1179 123 12 0 chr10 5790283 5790453 -139798835 - AluSg/x SINE Alu -10 302 131 22 0 0 0 chr10 5790513 5790535 -139798753 + AT_rich Low_complexity Low_complexity 1 22 0 880 150 58 46 chr10 5790741 5790892 -139798396 - AluJo SINE Alu -18 294 139 2218 107 0 3 chr10 5790892 5791182 -139798106 - AluSg1 SINE Alu -20 289 1 880 150 58 46 chr10 5791182 5791203 -139798085 - AluJo SINE Alu -173 139 120 944 190 12 0 chr10 5791491 5791654 -139797634 + AluJb SINE Alu 135 299 -13 185 105 0 26 chr10 5793008 5793046 -139796242 + (TCCCC)n Simple_repeat Simple_repeat 2 38 0 242 206 147 15 chr10 5793737 5793805 -139795483 - MER5A DNA MER1_type -83 106 30 346 313 120 7 chr10 5794175 5794325 -139794963 - MIR SINE MIR -68 194 28 198 0 0 0 chr10 5794401 5794423 -139794865 + (TTTA)n Simple_repeat Simple_repeat 2 23 0 2130 113 0 0 chr10 5794436 5794710 -139794578 - AluSx SINE Alu -38 274 1 487 127 0 38 chr10 5794966 5795045 -139794243 - Tigger3(Golem) DNA MER2_type -730 2299 2224 2138 90 54 0 chr10 5795097 5795375 -139793913 - AluSc SINE Alu -16 293 1 1143 121 60 16 chr10 5795646 5795828 -139793460 + MER30B DNA MER1_type 1 190 0 183 397 0 15 chr10 5795865 5795933 -139793355 - MIR SINE MIR -195 67 1 617 132 0 101 chr10 5796157 5796197 -139793091 - L1MB3 LINE L1 0 6183 6141 2436 69 16 3 chr10 5796197 5796500 -139792788 - AluSq SINE Alu -6 307 1 617 132 0 101 chr10 5796500 5796618 -139792670 - L1MB3 LINE L1 -42 6141 6041 307 280 21 0 chr10 5796619 5796762 -139792526 - AluSg/x SINE Alu -17 283 138 9976 91 10 8 chr10 5796901 5798323 -139790965 - HERV9 LTR ERV1 -5699 2700 1277 1674 85 229 178 chr10 5798333 5798839 -139790449 - LTR12 LTR ERV1 -130 584 53 250 250 0 0 chr10 5798839 5798891 -139790397 - LTR30 LTR ERV1 -670 52 1 399 283 44 0 chr10 5798891 5799050 -139790238 - L1MB1 LINE L1 -11 6157 5992 189 280 0 67 chr10 5799054 5799129 -139790159 - MER5A DNA MER1_type -115 74 5 291 286 99 11 chr10 5799195 5799286 -139790002 - L2 LINE L2 -2127 1187 1089 358 279 62 93 chr10 5799688 5799946 -139789342 + L2 LINE L2 2891 3140 -132 2209 138 0 3 chr10 5800028 5800340 -139788948 + AluSx SINE Alu 1 311 -1 279 143 0 0 chr10 5800565 5800607 -139788681 + MER57A LTR ERV1 295 336 -67 2481 156 34 5 chr10 5800663 5801079 -139788209 - MSTB1 LTR MaLR -1 431 4 2229 103 0 0 chr10 5801546 5801864 -139787424 + AluSx SINE Alu 1 318 0 1110 156 23 37 chr10 5802106 5802324 -139786964 - MER20 DNA MER1_type -4 215 1 2259 118 0 22 chr10 5802651 5802966 -139786322 + AluSx SINE Alu 1 308 -4 2309 86 0 13 chr10 5802974 5803277 -139786011 + AluSg SINE Alu 1 299 -11 26 30 0 0 chr10 5803550 5803583 -139785705 + AT_rich Low_complexity Low_complexity 1 33 0 1739 76 167 8 chr10 5803585 5803836 -139785452 + AluSg SINE Alu 1 291 -9 1506 161 95 0 chr10 5803847 5804120 -139785168 + AluJb SINE Alu 1 299 -13 2232 93 6 29 chr10 5804465 5804778 -139784510 + AluSc SINE Alu 4 309 0 2287 75 34 17 chr10 5804811 5805105 -139784183 + AluSg SINE Alu 1 299 -11 267 250 125 0 chr10 5805229 5805317 -139783971 - MER103 DNA DNA 0 166 68 324 300 119 92 chr10 5805317 5805423 -139783865 + L1ME LINE L1 5553 5655 -507 1871 158 49 0 chr10 5805423 5805707 -139783581 + AluJb SINE Alu 1 298 -14 2088 145 3 0 chr10 5805709 5806013 -139783275 + AluSx SINE Alu 1 305 -7 324 300 119 92 chr10 5806013 5806130 -139783158 + L1ME LINE L1 5655 5785 -377 2304 95 10 0 chr10 5806275 5806580 -139782708 - AluSp SINE Alu -4 309 2 393 279 71 63 chr10 5806721 5806975 -139782313 + HAL1 LINE L1 19 274 -2233 2247 100 7 0 chr10 5807224 5807515 -139781773 - AluSx SINE Alu -19 293 1 390 251 113 87 chr10 5807817 5808058 -139781230 - L1MC4a LINE L1 -317 5804 5600 2369 78 10 0 chr10 5808640 5808934 -139780354 - AluSx SINE Alu -15 297 1 1727 140 0 111 chr10 5808995 5809337 -139779951 - AluJo SINE Alu -8 304 1 323 207 0 0 chr10 5809413 5809471 -139779817 - MLT1H LTR MaLR 0 549 492 509 254 124 37 chr10 5809545 5809762 -139779526 - MLT1H LTR MaLR -205 344 109 956 169 0 0 chr10 5810380 5810540 -139778748 + FRAM SINE Alu 5 164 -12 358 223 109 63 chr10 5810540 5810715 -139778573 - MLT1J LTR MaLR -48 463 281 1111 88 0 0 chr10 5810742 5810878 -139778410 + AluSq/x SINE Alu 1 136 -177 2178 100 3 0 chr10 5810878 5811168 -139778120 + AluSp SINE Alu 1 291 -22 2409 187 53 22 chr10 5811283 5811865 -139777423 + Charlie1 DNA MER1_type 1945 2544 -217 1398 175 0 24 chr10 5811867 5812118 -139777170 + AluJb SINE Alu 53 297 -15 657 164 164 0 chr10 5812132 5812303 -139776985 + Charlie1 DNA MER1_type 2558 2756 -5 2275 118 0 3 chr10 5812769 5813073 -139776215 - AluSx SINE Alu -9 303 1 547 242 117 17 chr10 5813090 5813321 -139775967 - L1ME3A LINE L1 -109 6061 5808 708 273 24 0 chr10 5813344 5813509 -139775779 + MER58A DNA MER1_type 26 194 -30 2324 99 0 10 chr10 5813512 5813815 -139775473 - AluSx SINE Alu -12 300 1 1674 179 4 0 chr10 5814407 5814687 -139774601 + AluJo SINE Alu 6 286 -26 180 0 0 0 chr10 5814716 5814736 -139774552 + (T)n Simple_repeat Simple_repeat 1 20 0 282 178 27 27 chr10 5815048 5815121 -139774167 - L1ME1 LINE L1 -5 6161 6089 651 248 94 71 chr10 5815283 5815537 -139773751 - MIR SINE MIR 0 262 3 504 341 81 0 chr10 5815566 5815789 -139773499 - L3 LINE CR1 -309 1268 1028 949 143 0 0 chr10 5815794 5815927 -139773361 - AluSg/x SINE Alu -44 266 134 2262 65 29 0 chr10 5815929 5816208 -139773080 - AluSp SINE Alu -4 309 23 275 273 105 49 chr10 5819326 5819469 -139769819 - L2 LINE L2 -186 3086 2936 2359 106 0 0 chr10 5819652 5819955 -139769333 - AluSx SINE Alu -9 303 1 207 0 0 0 chr10 5820168 5820191 -139769097 + (TG)n Simple_repeat Simple_repeat 2 24 0 2105 102 15 52 chr10 5820201 5820526 -139768762 - AluSq SINE Alu 0 313 1 1729 162 45 3 chr10 5820573 5820863 -139768425 - AluJb SINE Alu -10 302 1 312 303 28 9 chr10 5821419 5821528 -139767760 + MLT1J1 LTR MaLR 226 336 -110 287 230 54 0 chr10 5821592 5821666 -139767622 + MLT1J1 LTR MaLR 364 441 -5 22 0 0 0 chr10 5821816 5821838 -139767450 + AT_rich Low_complexity Low_complexity 1 22 0 368 254 63 48 chr10 5822653 5822779 -139766509 - MIR3 SINE MIR -75 133 6 194 0 39 0 chr10 5823858 5823884 -139765404 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1903 126 3 18 chr10 5823886 5824171 -139765117 - AluSx SINE Alu -31 281 1 2160 92 23 10 chr10 5825283 5825588 -139763700 + AluSq SINE Alu 1 309 -4 1714 157 21 14 chr10 5825595 5825875 -139763413 + AluJo SINE Alu 1 282 -30 249 357 20 0 chr10 5825982 5826080 -139763208 - L2 LINE L2 -221 3051 2952 713 190 20 77 chr10 5826115 5826274 -139763014 - MER53 DNA DNA -5 184 36 2080 136 0 13 chr10 5826274 5826590 -139762698 - AluSx SINE Alu 0 312 1 713 190 20 77 chr10 5826590 5826625 -139762663 - MER53 DNA DNA -153 36 1 449 290 103 60 chr10 5826752 5827100 -139762188 - MLT1J2 LTR MaLR -24 426 64 2462 87 0 0 chr10 5827105 5827414 -139761874 + AluSg SINE Alu 1 309 -1 1545 163 22 22 chr10 5827522 5827642 -139761646 + AluJb SINE Alu 11 130 -182 2419 91 0 0 chr10 5827642 5827939 -139761349 + AluSx SINE Alu 1 297 -15 1545 163 22 22 chr10 5827939 5828095 -139761193 + AluJb SINE Alu 129 287 -25 2071 145 3 0 chr10 5828372 5828675 -139760613 + AluSx SINE Alu 1 304 -8 193 286 0 0 chr10 5828705 5828747 -139760541 - MIR SINE MIR -140 122 81 1192 139 6 0 chr10 5829265 5829438 -139759850 + AluJo SINE Alu 1 174 -138 1719 93 0 9 chr10 5829667 5829893 -139759395 + AluSq SINE Alu 74 297 -16 1735 106 75 4 chr10 5830001 5830256 -139759032 - AluSx SINE Alu -35 277 5 2144 85 14 7 chr10 5830624 5830930 -139758358 + AluY SINE Alu 1 308 0 4301 205 105 20 chr10 5832306 5833420 -139755868 + L1MC4 LINE L1 6469 7677 -365 470 199 316 7 chr10 5833451 5833672 -139755616 + L1MC4 LINE L1 7763 7995 0 2183 119 3 0 chr10 5838492 5838786 -139750502 - AluSx SINE Alu -17 295 1 1533 119 14 0 chr10 5839359 5839578 -139749710 + AluSx SINE Alu 5 226 -86 2004 122 0 4 chr10 5839680 5839959 -139749329 + AluSq SINE Alu 1 278 -35 270 0 0 0 chr10 5839960 5839990 -139749298 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 578 269 75 21 chr10 5840732 5840918 -139748370 + MIR SINE MIR 41 236 -26 21 36 0 0 chr10 5841327 5841355 -139747933 + AT_rich Low_complexity Low_complexity 1 28 0 292 325 35 9 chr10 5842353 5842467 -139746821 - MIR3 SINE MIR -45 163 47 302 254 5 42 chr10 5843050 5843150 -139746138 + MER5A DNA MER1_type 13 98 -80 386 228 8 63 chr10 5843192 5843319 -139745969 - MIR SINE MIR -141 121 2 185 250 42 0 chr10 5845039 5845087 -139744201 - L2 LINE L2 -80 3233 3184 2107 105 0 28 chr10 5847018 5847327 -139741961 + AluSc SINE Alu 1 301 0 1394 119 0 99 chr10 5847729 5847852 -139741436 + AluJb SINE Alu 1 88 -224 2370 75 3 0 chr10 5847852 5848145 -139741143 - AluSg SINE Alu -16 294 1 1394 119 0 99 chr10 5848145 5848274 -139741014 + AluJb SINE Alu 88 228 -84 1401 169 139 4 chr10 5849290 5849556 -139739732 + AluJo SINE Alu 1 302 0 599 279 107 30 chr10 5850698 5850768 -139738520 - MER112 DNA MER1_type -9 251 188 2023 125 31 0 chr10 5850768 5851057 -139738231 - AluSx SINE Alu -14 298 1 599 279 107 30 chr10 5851057 5851219 -139738069 - MER112 DNA MER1_type -72 188 1 1525 154 85 24 chr10 5851445 5851738 -139737550 + AluJo SINE Alu 1 311 -1 513 271 8 0 chr10 5851841 5851963 -139737325 - MER58B DNA MER1_type -3 338 216 181 180 20 80 chr10 5852665 5852715 -139736573 - MER5A DNA MER1_type -125 64 18 1853 153 11 3 chr10 5852754 5853036 -139736252 - AluSx SINE Alu -28 284 1 832 150 8 0 chr10 5854730 5854863 -139734425 - AluJb SINE Alu -177 135 2 2109 119 3 0 chr10 5854909 5855216 -139734072 - AluSx SINE Alu 0 312 1 222 229 193 0 chr10 5855409 5855492 -139733796 + MIR SINE MIR 78 176 -86 1860 104 93 11 chr10 5855648 5855927 -139733361 - AluSc SINE Alu -7 302 1 1774 161 13 10 chr10 5856044 5856343 -139732945 - AluJb SINE Alu -12 300 1 294 241 76 0 chr10 5856354 5856433 -139732855 - L2 LINE L2 0 3313 3229 23 33 0 0 chr10 5856442 5856472 -139732816 + AT_rich Low_complexity Low_complexity 1 30 0 397 160 126 50 chr10 5856587 5856706 -139732582 - MER106A DNA MER1_type -1 235 108 413 287 10 0 chr10 5856891 5856992 -139732296 - L2 LINE L2 -954 2360 2259 290 313 47 7 chr10 5857000 5857150 -139732138 - L2 LINE L2 -1261 2053 1898 1552 177 0 53 chr10 5858493 5858798 -139730490 - AluJo SINE Alu -23 289 6 2435 76 26 0 chr10 5858862 5859165 -139730123 - AluY SINE Alu 0 311 1 1608 111 37 27 chr10 5859165 5859525 -139729763 + Tigger7 DNA MER2_type 180 2573 -14 27 0 0 0 chr10 5859534 5859561 -139729727 + AT_rich Low_complexity Low_complexity 1 27 0 347 138 11 0 chr10 5859586 5859673 -139729615 + (TA)n Simple_repeat Simple_repeat 2 89 0 26 64 0 0 chr10 5859691 5859738 -139729550 + AT_rich Low_complexity Low_complexity 1 47 0 2511 58 0 16 chr10 5860928 5861239 -139728049 + AluY SINE Alu 2 307 -4 2101 136 0 0 chr10 5861452 5861753 -139727535 - AluSx SINE Alu -10 302 2 1709 225 204 14 chr10 5861764 5862005 -139727283 - L1MD3 LINE L1 0 8037 7843 2040 146 0 3 chr10 5862005 5862307 -139726981 - AluJb SINE Alu -11 301 1 1709 225 204 14 chr10 5862307 5862870 -139726418 - L1MD3 LINE L1 -194 7843 7079 2292 107 3 7 chr10 5864837 5865145 -139724143 + AluSc SINE Alu 1 307 -2 2311 77 0 42 chr10 5865700 5866013 -139723275 - AluSq SINE Alu -13 300 1 23 0 0 0 chr10 5866070 5866093 -139723195 + AT_rich Low_complexity Low_complexity 1 23 0 180 347 41 41 chr10 5866863 5866961 -139722327 - L2 LINE L2 -652 2662 2565 237 167 0 0 chr10 5867533 5867587 -139721701 + (TA)n Simple_repeat Simple_repeat 2 55 0 1568 156 0 0 chr10 5867609 5867846 -139721442 - AluSx SINE Alu -75 237 1 310 198 62 0 chr10 5868062 5868143 -139721145 + L1MB8 LINE L1 5606 5691 -493 746 161 1 10 chr10 5868250 5868400 -139720888 + L1P3 LINE L1 5668 5805 -349 1540 172 36 45 chr10 5868401 5868669 -139720619 + MER7A DNA MER2_type 21 285 -2753 2005 128 0 24 chr10 5868669 5868966 -139720322 + AluSc SINE Alu 1 290 -19 1540 172 36 45 chr10 5868966 5869028 -139720260 + MER7A DNA MER2_type 285 346 0 1454 157 113 18 chr10 5869028 5869365 -139719923 + L1MB8 LINE L1 5800 6168 -10 21 0 0 0 chr10 5869367 5869388 -139719900 + AT_rich Low_complexity Low_complexity 1 21 0 414 235 114 8 chr10 5869815 5869947 -139719341 - MIR SINE MIR -12 250 105 886 130 0 71 chr10 5870540 5870694 -139718594 - FLAM_C SINE Alu 0 143 1 1618 212 0 0 chr10 5875608 5875919 -139713369 + AluJb SINE Alu 1 311 -1 620 152 18 30 chr10 5875919 5876084 -139713204 + GA-rich Low_complexity Low_complexity 1 163 0 254 259 12 25 chr10 5876732 5876813 -139712475 + MLT1L LTR MaLR 7 86 -529 441 0 0 0 chr10 5876834 5876883 -139712405 + (TG)n Simple_repeat Simple_repeat 1 49 0 508 235 29 7 chr10 5876950 5877086 -139712202 + MLT1L LTR MaLR 129 267 -348 336 228 142 16 chr10 5877179 5877306 -139711982 + MLT1L LTR MaLR 432 574 -41 2081 132 0 3 chr10 5877583 5877878 -139711410 - AluSx SINE Alu -18 294 1 231 232 29 0 chr10 5878087 5878156 -139711132 - HAL1 LINE L1 -585 1922 1852 2551 200 130 33 chr10 5878204 5879601 -139709687 + L1ME2 LINE L1 4567 6155 -9 774 347 99 62 chr10 5879785 5880356 -139708932 + L1M4 LINE L1 2933 3481 -2665 2037 120 0 10 chr10 5880356 5880655 -139708633 - AluSx SINE Alu -11 301 6 774 347 99 62 chr10 5880655 5880914 -139708374 + L1M4 LINE L1 3481 3729 -2417 2570 39 10 0 chr10 5880914 5881221 -139708067 + AluY SINE Alu 1 310 -1 774 347 99 62 chr10 5881221 5881556 -139707732 + L1M4 LINE L1 3729 4143 -2003 285 258 92 62 chr10 5881578 5881818 -139707470 - HAL1b LINE L1 -702 646 400 234 221 163 12 chr10 5881851 5881937 -139707351 - HAL1b LINE L1 -1026 322 224 234 0 0 0 chr10 5882054 5882080 -139707208 + (A)n Simple_repeat Simple_repeat 1 26 0 9143 150 36 24 chr10 5882090 5883871 -139705417 + L1MA4 LINE L1 3472 5321 -979 234 62 0 0 chr10 5883871 5883903 -139705385 + (CAAG)n Simple_repeat Simple_repeat 3 34 0 9143 150 36 24 chr10 5883903 5884893 -139704395 + L1MA4 LINE L1 5321 6298 -2 3463 174 20 36 chr10 5885187 5885936 -139703352 - L1MB8 LINE L1 0 6178 5442 22 35 0 0 chr10 5885936 5885965 -139703323 + AT_rich Low_complexity Low_complexity 1 29 0 793 206 35 0 chr10 5885996 5886166 -139703122 - MER58A DNA MER1_type -4 220 45 510 272 70 62 chr10 5886289 5886642 -139702646 - MLT1H LTR MaLR -4 545 72 590 136 9 9 chr10 5886688 5886798 -139702490 + L1MB7 LINE L1 6058 6167 -17 1447 282 148 42 chr10 5887590 5888061 -139701227 - HAL1 LINE L1 -1139 1368 948 1867 159 10 3 chr10 5888061 5888357 -139700931 + AluJo SINE Alu 1 298 -14 1447 282 148 42 chr10 5888357 5889064 -139700224 - HAL1 LINE L1 -1559 948 66 373 257 50 40 chr10 5889469 5889570 -139699718 + L2 LINE L2 3171 3272 0 412 297 62 15 chr10 5889587 5889860 -139699428 + L1MC/D LINE L1 3587 3872 -2274 531 234 131 11 chr10 5890190 5890365 -139698923 + L2 LINE L2 3118 3313 0 447 354 103 37 chr10 5890377 5890899 -139698389 + L2 LINE L2 2713 3263 -9 21 0 0 0 chr10 5891921 5891942 -139697346 + GC_rich Low_complexity Low_complexity 1 21 0 1660 145 104 0 chr10 5892551 5892820 -139696468 - AluSx SINE Alu -15 297 1 2325 87 3 3 chr10 5893507 5893805 -139695483 - AluSc SINE Alu -11 298 1 377 279 113 30 chr10 5894463 5894792 -139694496 + L1ME3A LINE L1 3135 3501 -2645 261 236 0 42 chr10 5894839 5894911 -139694377 + L1ME3A LINE L1 5446 5514 -2294 23 54 0 0 chr10 5894959 5894996 -139694292 + AT_rich Low_complexity Low_complexity 1 37 0 2371 81 0 0 chr10 5895101 5895396 -139693892 - AluSg SINE Alu -15 295 1 543 299 45 7 chr10 5895432 5895686 -139693602 + L1M1 LINE L1 2720 3055 -4596 1619 180 14 0 chr10 5895713 5895991 -139693297 - AluJo SINE Alu -30 282 1 2145 166 127 50 chr10 5895992 5896202 -139693086 + Charlie1 DNA MER1_type 2049 2241 -520 1563 156 20 60 chr10 5896202 5896503 -139692785 + AluJo SINE Alu 24 312 0 2145 166 127 50 chr10 5896503 5896894 -139692394 + Charlie1 DNA MER1_type 2241 2708 -53 1995 130 7 0 chr10 5896894 5897178 -139692110 - AluSx SINE Alu -26 286 1 2145 166 127 50 chr10 5897178 5897236 -139692052 + Charlie1 DNA MER1_type 2708 2760 -1 315 242 94 8 chr10 5897237 5897365 -139691923 + L1ME3A LINE L1 5825 5963 -207 320 266 121 35 chr10 5897624 5897823 -139691465 + L1MC/D LINE L1 4485 4700 -1446 401 300 147 56 chr10 5897868 5898311 -139690977 + L1MC/D LINE L1 5311 5793 -2015 318 327 132 69 chr10 5899379 5899902 -139689386 + L1M2 LINE L1 784 1339 -5510 3716 118 92 18 chr10 5900443 5901174 -139688114 - Tigger3(Golem) DNA MER2_type -2 3027 2243 1181 179 19 0 chr10 5901209 5901416 -139687872 - Tigger3(Golem) DNA MER2_type -2818 211 1 549 316 81 42 chr10 5901487 5901917 -139687371 - L2 LINE L2 0 3313 2867 896 232 127 81 chr10 5901919 5902424 -139686864 - L1ME3A LINE L1 -15 6155 5628 367 209 234 13 chr10 5902860 5903018 -139686270 - L1ME3A LINE L1 -551 5611 5419 2114 109 0 39 chr10 5903065 5903376 -139685912 - AluSq SINE Alu -14 299 1 2942 212 82 45 chr10 5903379 5904556 -139684732 - L1ME3A LINE L1 -1468 4678 3458 745 231 21 0 chr10 5904580 5904868 -139684420 + L1M4b LINE L1 1140 1507 -5352 184 167 119 24 chr10 5904939 5904981 -139684307 + MIR3 SINE MIR 109 154 -54 339 221 38 84 chr10 5905055 5905186 -139684102 - HAL1 LINE L1 -37 2470 2346 812 118 0 9 chr10 5905248 5905358 -139683930 - FLAM_C SINE Alu -25 118 10 306 278 119 16 chr10 5905365 5905491 -139683797 - HAL1 LINE L1 -200 2307 2169 192 97 0 0 chr10 5905614 5905645 -139683643 + (CA)n Simple_repeat Simple_repeat 1 31 0 834 265 92 12 chr10 5905908 5906233 -139683055 + LTR16B LTR ERVL 114 464 0 270 313 23 16 chr10 5906239 5906367 -139682921 + HERV16 LTR ERVL 6 134 -4862 344 337 35 25 chr10 5907172 5907457 -139681831 + HERV16 LTR ERVL 4709 4996 0 1053 298 59 11 chr10 5907457 5907900 -139681388 + LTR16B LTR ERVL 1 464 0 210 288 50 0 chr10 5907942 5908022 -139681266 + MER5A DNA MER1_type 8 91 -98 1727 145 0 0 chr10 5908024 5908273 -139681015 - AluSx SINE Alu -14 298 50 761 167 18 18 chr10 5908482 5908650 -139680638 + L1 LINE L1 4549 4716 -1430 1769 144 0 62 chr10 5908652 5908957 -139680331 + AluJb SINE Alu 14 299 -13 2100 113 50 0 chr10 5908959 5909242 -139680046 + AluSc SINE Alu 1 297 -12 648 156 16 0 chr10 5909242 5909370 -139679918 + L1MA5 LINE L1 6171 6300 0 193 40 0 0 chr10 5909538 5909563 -139679725 + (TTTG)n Simple_repeat Simple_repeat 1 44 0 959 58 0 17 chr10 5909563 5909673 -139679615 - AluY SINE Alu -31 280 171 910 280 8 23 chr10 5909723 5909980 -139679308 + MIR SINE MIR 4 256 -6 587 192 111 39 chr10 5910001 5910229 -139679059 + L1MC5 LINE L1 7259 7415 -393 991 177 18 31 chr10 5910230 5910309 -139678979 + FAM SINE Alu 1 4294967214 -267 1819 98 206 46 chr10 5910309 5910630 -139678658 + MSTA LTR MaLR 1 390 -38 2447 63 0 35 chr10 5910630 5910945 -139678343 - AluY SINE Alu -7 304 1 1819 98 206 46 chr10 5910945 5910992 -139678296 + MSTA LTR MaLR 390 428 0 991 177 18 31 chr10 5910992 5911124 -139678164 + FAM SINE Alu -83 49 0 548 219 26 0 chr10 5911159 5911310 -139677978 + L1M4 LINE L1 2231 2385 -3761 26 93 0 0 chr10 5911315 5911390 -139677898 + AT_rich Low_complexity Low_complexity 1 75 0 1892 249 38 16 chr10 5911407 5912037 -139677251 + L1M4 LINE L1 2371 3014 -3132 291 287 59 20 chr10 5912054 5912155 -139677133 - MLT2F LTR ERVL -284 379 275 3936 276 100 52 chr10 5912199 5912849 -139676439 - ERVL LTR ERVL -2715 3049 2432 2338 83 0 0 chr10 5912849 5913138 -139676150 - AluSc SINE Alu 0 309 21 3936 276 100 52 chr10 5913138 5914165 -139675123 - ERVL LTR ERVL -3332 2432 1291 921 310 28 32 chr10 5914272 5914965 -139674323 - ERVL LTR ERVL -4646 1118 352 605 154 106 24 chr10 5915096 5915219 -139674069 - FLAM_A SINE Alu 0 133 1 1350 149 0 14 chr10 5915807 5916021 -139673267 + AluSg/x SINE Alu 94 304 -8 183 222 0 0 chr10 5916556 5916601 -139672687 + (CATA)n Simple_repeat Simple_repeat 4 48 0 25 0 0 0 chr10 5917175 5917200 -139672088 + AT_rich Low_complexity Low_complexity 1 25 0 240 195 35 46 chr10 5917998 5918085 -139671203 + (CCCGG)n Simple_repeat Simple_repeat 5 90 0 2264 122 0 0 chr10 5919428 5919731 -139669557 + AluSq SINE Alu 7 309 -4 1154 126 0 0 chr10 5919731 5919919 -139669369 + AluSg/x SINE Alu 132 319 0 463 281 96 45 chr10 5919922 5920214 -139669074 - HAL1 LINE L1 -218 2289 1983 213 277 0 15 chr10 5921335 5921400 -139667888 + CT-rich Low_complexity Low_complexity 4 67 0 233 304 39 20 chr10 5921789 5921891 -139667397 - HAL1 LINE L1 -2369 138 35 324 158 0 0 chr10 5921990 5922047 -139667241 + C-rich Low_complexity Low_complexity 5 61 0 2120 96 3 41 chr10 5922051 5922342 -139666946 - AluSx SINE Alu -32 280 1 2142 116 10 13 chr10 5922781 5923092 -139666196 + AluJb SINE Alu 1 310 -2 237 211 0 0 chr10 5923564 5923616 -139665672 + MER63 DNA MER1_type 696 747 -315 4111 148 81 44 chr10 5925915 5926207 -139663081 - L1MB2 LINE L1 -2 6169 5889 1415 134 181 0 chr10 5926207 5926461 -139662827 - AluSg SINE Alu 0 300 1 4111 148 81 44 chr10 5926461 5926473 -139662815 - L1MB2 LINE L1 -282 5889 5879 2089 113 3 36 chr10 5926473 5926782 -139662506 - AluSx SINE Alu -13 299 1 4111 148 81 44 chr10 5926782 5927449 -139661839 - L1MB2 LINE L1 -292 5879 5157 1256 268 51 3 chr10 5927613 5927964 -139661324 - MER87 LTR ERV1 0 541 174 2364 77 0 3 chr10 5928093 5928380 -139660908 - AluSg SINE Alu -14 296 11 203 234 11 117 chr10 5928422 5928516 -139660772 - L2 LINE L2 0 3272 3189 528 276 81 57 chr10 5929170 5929416 -139659872 - MIR SINE MIR -3 259 8 2227 109 0 16 chr10 5929529 5929833 -139659455 - AluSq SINE Alu -14 299 1 192 77 0 0 chr10 5930487 5930513 -139658775 + (A)n Simple_repeat Simple_repeat 1 26 0 1129 210 12 12 chr10 5930515 5930666 -139658622 + L1 LINE L1 4015 4169 -1977 2309 96 0 0 chr10 5930666 5930990 -139658298 + AluSx SINE Alu 1 324 0 1129 210 12 12 chr10 5930990 5931080 -139658208 + L1 LINE L1 4168 4257 -1889 289 318 132 21 chr10 5932137 5932326 -139656962 + MER63A DNA MER1_type 1 210 0 324 0 0 0 chr10 5932585 5932621 -139656667 + (TG)n Simple_repeat Simple_repeat 1 36 0 2199 134 3 0 chr10 5932725 5933030 -139656258 - AluJb SINE Alu -6 306 1 2160 112 7 17 chr10 5934923 5935219 -139654069 + AluSx SINE Alu 1 293 -19 325 335 0 0 chr10 5936158 5936337 -139652951 + (CGTG)n Simple_repeat Simple_repeat 1 179 0 338 335 0 0 chr10 5936509 5936688 -139652600 + (CGTG)n Simple_repeat Simple_repeat 1 179 0 302 328 0 0 chr10 5936614 5936785 -139652503 + (TG)n Simple_repeat Simple_repeat 2 172 0 * 712 176 8 0 chr10 5937494 5937625 -139651663 + FLAM_C SINE Alu 2 133 -10 358 278 51 77 chr10 5938018 5938291 -139650997 - MLT1K LTR MaLR 0 588 323 68 24 0 0 chr10 5939430 5939512 -139649776 + AT_rich Low_complexity Low_complexity 1 82 0 237 109 47 31 chr10 5939750 5939814 -139649474 + (TCTCTG)n Simple_repeat Simple_repeat 2 66 0 2285 122 0 0 chr10 5939913 5940216 -139649072 - AluSx SINE Alu -9 303 1 1740 159 7 11 chr10 5940262 5940539 -139648749 - AluJb SINE Alu -36 276 1 1750 100 8 8 chr10 5941859 5942098 -139647190 + AluSx SINE Alu 55 293 -19 27 0 0 0 chr10 5942154 5942181 -139647107 + AT_rich Low_complexity Low_complexity 1 27 0 2184 97 0 72 chr10 5943355 5943675 -139645613 + AluSx SINE Alu 6 302 -10 428 103 0 0 chr10 5945306 5945364 -139643924 + AluSq/x SINE Alu 62 119 -193 2469 70 0 19 chr10 5946323 5946635 -139642653 - AluY SINE Alu -5 306 1 1958 163 7 0 chr10 5946682 5946982 -139642306 + AluSx SINE Alu 1 302 -10 452 287 61 57 chr10 5947169 5947256 -139642032 + L1ME3A LINE L1 5209 5294 -876 722 172 31 0 chr10 5947256 5947384 -139641904 + FLAM_C SINE Alu 1 132 -1 452 287 61 57 chr10 5947384 5947998 -139641290 + L1ME3A LINE L1 5294 5928 -242 967 98 0 0 chr10 5948154 5948287 -139641001 + FLAM_C SINE Alu 1 133 0 1377 177 58 50 chr10 5949990 5950145 -139639143 + MLT1A1 LTR MaLR 1 153 -212 2126 130 3 0 chr10 5950145 5950438 -139638850 + AluSq SINE Alu 1 294 -19 1377 177 58 50 chr10 5950438 5950604 -139638684 + MLT1A1 LTR MaLR 153 328 -37 1508 182 91 0 chr10 5950604 5950879 -139638409 - AluJo SINE Alu -12 300 1 1377 177 58 50 chr10 5950879 5950918 -139638370 + MLT1A1 LTR MaLR 328 365 0 358 177 54 11 chr10 5952837 5952939 -139636349 + (TCTA)n Simple_repeat Simple_repeat 1 97 -480 1886 170 0 0 chr10 5952939 5953227 -139636061 - 7SLRNA srpRNA srpRNA -12 308 21 358 177 54 11 chr10 5953227 5953391 -139635897 + (TCTA)n Simple_repeat Simple_repeat 97 577 0 1603 180 44 39 chr10 5954096 5954484 -139634804 - MLT1B LTR MaLR 0 390 1 214 250 0 59 chr10 5954627 5954695 -139634593 - MER91 DNA MER1_type 0 140 77 297 0 0 0 chr10 5954907 5954940 -139634348 + (T)n Simple_repeat Simple_repeat 1 33 0 743 273 83 5 chr10 5954985 5955190 -139634098 - MER58A DNA MER1_type 0 224 4 345 240 0 13 chr10 5955246 5955321 -139633967 - MLT1J LTR MaLR -202 309 236 1405 244 35 32 chr10 5956532 5956905 -139632383 + MLT1B LTR MaLR 1 374 -16 1766 187 3 7 chr10 5956992 5957291 -139631997 - AluJo SINE Alu -13 299 2 2610 50 0 3 chr10 5957387 5957688 -139631600 + AluY SINE Alu 1 300 -11 262 355 24 30 chr10 5957947 5958113 -139631175 + L2 LINE L2 3102 3266 -6 1844 152 0 49 chr10 5958890 5959218 -139630070 - AluJo SINE Alu 0 312 1 528 99 0 12 chr10 5959410 5959491 -139629797 - MADE1 DNA Mariner 0 80 1 186 347 67 0 chr10 5959797 5959872 -139629416 - MIR SINE MIR -99 163 84 229 250 49 107 chr10 5960184 5960289 -139628999 + ORSL DNA AcHobo 32 142 -133 24 0 0 0 chr10 5960289 5960313 -139628975 + AT_rich Low_complexity Low_complexity 1 24 0 229 250 49 107 chr10 5960313 5960331 -139628957 + ORSL DNA AcHobo 142 159 -116 2307 78 0 14 chr10 5960331 5960626 -139628662 + AluSc SINE Alu 1 291 -18 229 250 49 107 chr10 5960626 5960702 -139628586 + ORSL DNA AcHobo 159 242 -33 1319 148 0 37 chr10 5960854 5961070 -139628218 - AluJb SINE Alu -19 293 86 23 0 0 0 chr10 5961674 5961697 -139627591 + AT_rich Low_complexity Low_complexity 1 23 0 1551 148 41 10 chr10 5961700 5961991 -139627297 - L1MA9 LINE L1 -1 6311 6012 1127 122 0 12 chr10 5962070 5962234 -139627054 - AluJb SINE Alu -13 299 138 224 286 0 14 chr10 5962739 5962809 -139626479 + MIR SINE MIR 54 122 -86 1881 148 7 0 chr10 5962839 5963137 -139626151 - AluSx SINE Alu -12 300 1 201 196 22 0 chr10 5965286 5965332 -139623956 + (TTCA)n Simple_repeat Simple_repeat 3 49 0 259 264 50 25 chr10 5965871 5965992 -139623296 + MIR SINE MIR 59 182 -80 338 353 44 0 chr10 5966147 5966283 -139623005 - MIR SINE MIR -115 147 6 360 242 0 0 chr10 5966755 5966850 -139622438 + (CCTG)n Simple_repeat Simple_repeat 3 97 0 197 370 14 0 chr10 5968552 5968625 -139620663 - MIR SINE MIR -20 242 169 230 263 158 0 chr10 5968888 5968983 -139620305 + MIR SINE MIR 140 249 -13 318 50 0 0 chr10 5969358 5969398 -139619890 + (GGAA)n Simple_repeat Simple_repeat 3 42 0 2270 93 3 0 chr10 5969398 5969708 -139619580 + AluSx SINE Alu 2 312 0 2229 98 10 0 chr10 5971083 5971388 -139617900 - AluSx SINE Alu -4 308 1 273 302 85 48 chr10 5971557 5971582 -139617706 + L2 LINE L2 3077 3100 -172 1684 145 3 63 chr10 5971582 5971914 -139617374 - AluJb SINE Alu 0 312 1 273 302 85 48 chr10 5971914 5972077 -139617211 + L2 LINE L2 3100 3272 0 2253 100 0 0 chr10 5972766 5973065 -139616223 + AluSc SINE Alu 1 299 -10 968 106 17 22 chr10 5973846 5974026 -139615262 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 228 185 0 65 chr10 5974026 5974118 -139615170 + CT-rich Low_complexity Low_complexity 2 87 0 190 224 336 9 chr10 5975190 5975297 -139613991 + MIR3 SINE MIR 35 176 -32 1680 150 11 0 chr10 5976900 5977166 -139612122 + AluJo SINE Alu 1 269 -43 335 77 0 19 chr10 5977212 5977264 -139612024 + (TAAA)n Simple_repeat Simple_repeat 2 52 0 274 331 69 25 chr10 5978270 5978430 -139610858 - MIR3 SINE MIR -22 186 20 1023 134 12 0 chr10 5978762 5978926 -139610362 + FRAM SINE Alu 1 158 -18 718 80 0 18 chr10 5979623 5979736 -139609552 + (TTCC)n Simple_repeat Simple_repeat 2 112 0 807 176 0 0 chr10 5979781 5979917 -139609371 - AluJ SINE Alu -44 268 133 241 307 13 0 chr10 5980433 5980508 -139608780 - L1ME3A LINE L1 -27 6143 6068 301 255 36 0 chr10 5980540 5980667 -139608621 - L1ME3 LINE L1 -169 5995 5862 1358 206 33 30 chr10 5980985 5981349 -139607939 + MLT1A1 LTR MaLR 1 365 0 735 146 0 24 chr10 5981754 5981877 -139607411 - AluJ SINE Alu -177 135 16 1552 172 32 0 chr10 5983192 5983471 -139605817 - AluJo SINE Alu -24 288 1 266 250 22 33 chr10 5983761 5983853 -139605435 + CT-rich Low_complexity Low_complexity 6 96 0 2317 211 56 36 chr10 5984363 5984733 -139604555 + L1ME2 LINE L1 5453 5843 -321 1951 133 3 0 chr10 5984733 5985027 -139604261 + AluSq SINE Alu 1 295 -18 2317 211 56 36 chr10 5985027 5985299 -139603989 + L1ME2 LINE L1 5843 6108 -56 29 28 0 0 chr10 5985299 5985335 -139603953 + AT_rich Low_complexity Low_complexity 1 36 0 10369 90 69 4 chr10 5985335 5986976 -139602312 - L1PBa LINE L1 -3802 3060 1311 373 169 0 0 chr10 5986979 5987038 -139602250 - L1PBa LINE L1 -5705 1158 1100 21 57 0 0 chr10 5987075 5987110 -139602178 + AT_rich Low_complexity Low_complexity 1 35 0 2092 130 0 3 chr10 5987450 5987757 -139601531 - AluSx SINE Alu -6 306 1 2170 95 17 0 chr10 5988246 5988541 -139600747 - AluSx SINE Alu -7 305 6 2053 114 3 10 chr10 5989306 5989603 -139599685 + AluSq SINE Alu 5 299 -14 541 176 231 0 chr10 5990270 5990378 -139598910 - FLAM_C SINE Alu 0 133 1 339 118 88 137 chr10 5990526 5990574 -139598714 + Tigger2 DNA MER2_type 1 43 -2675 1347 130 74 9 chr10 5990574 5990790 -139598498 + MER30 DNA MER1_type 1 230 0 339 118 88 137 chr10 5990790 5990843 -139598445 + Tigger2 DNA MER2_type 43 97 -2621 1925 127 3 20 chr10 5990846 5991146 -139598142 - AluSx SINE Alu -17 295 1 1590 151 52 17 chr10 5991188 5991479 -139597809 - AluJo SINE Alu -11 301 1 849 211 0 61 chr10 5991485 5991665 -139597623 - FAM SINE Alu -6 169 1 3530 132 78 8 chr10 5991665 5992277 -139597011 + Tigger2 DNA MER2_type 90 744 -1974 883 144 25 80 chr10 5992343 5992441 -139596847 + Tigger2 DNA MER2_type 2461 2544 -174 1959 136 0 7 chr10 5992441 5992742 -139596546 + AluSq SINE Alu 1 299 -14 883 144 25 80 chr10 5992742 5992844 -139596444 + Tigger2 DNA MER2_type 2544 2650 -68 640 159 9 0 chr10 5992846 5992953 -139596335 - Tigger1 DNA MER2_type -734 1684 1577 691 193 0 30 chr10 5992953 5993088 -139596200 + FLAM_C SINE Alu 1 131 -2 1147 176 36 40 chr10 5993126 5993376 -139595912 + AluJo SINE Alu 38 286 -26 464 298 105 34 chr10 5993718 5993956 -139595332 + MIR SINE MIR 7 261 -1 583 222 0 17 chr10 5994039 5994156 -139595132 + L2 LINE L2 3192 3306 -7 1471 152 50 21 chr10 5994495 5994778 -139594510 - AluJb SINE Alu -21 291 1 699 168 0 9 chr10 5995005 5995118 -139594170 + FLAM_C SINE Alu 2 113 -30 391 283 65 14 chr10 5995685 5995823 -139593465 - L2 LINE L2 -6 3266 3122 408 372 5 16 chr10 5995896 5996084 -139593204 - MIR SINE MIR -69 193 8 1926 125 3 0 chr10 5996112 5996400 -139592888 + AluJb SINE Alu 2 290 -22 555 235 62 0 chr10 5997400 5997562 -139591726 + L1ME LINE L1 5177 5348 -798 598 144 161 34 chr10 5997619 5997737 -139591551 - FLAM_C SINE Alu 0 133 1 1161 228 172 3 chr10 5997759 5998114 -139591174 + L1ME LINE L1 5386 5800 -370 494 296 123 0 chr10 5998125 5998287 -139591001 + MER5A DNA MER1_type 3 184 -5 254 174 43 0 chr10 5998295 5998341 -139590947 + MER5A DNA MER1_type 2 49 -140 1421 170 4 18 chr10 5998352 5998629 -139590659 + AluJb SINE Alu 9 281 -31 707 205 24 0 chr10 5998661 5998788 -139590500 + MER5A DNA MER1_type 56 185 -4 253 161 214 0 chr10 5998793 5998849 -139590439 - MER5A DNA MER1_type -114 75 8 2280 92 3 0 chr10 5998896 5999201 -139590087 + AluSx SINE Alu 1 306 -6 739 192 58 12 chr10 5999812 5999984 -139589304 - L1MA10 LINE L1 -11 6323 6144 2037 135 0 3 chr10 6000132 6000436 -139588852 + AluSx SINE Alu 1 303 -9 1651 154 26 7 chr10 6000522 6000827 -139588461 + AluSx SINE Alu 1 311 -1 1648 173 16 7 chr10 6000888 6001194 -139588094 + AluJo SINE Alu 3 311 -1 1941 152 0 0 chr10 6001199 6001508 -139587780 + AluSx SINE Alu 4 312 0 247 230 292 6 chr10 6001527 6001688 -139587600 + L1MC4 LINE L1 7689 7895 -147 1493 178 176 69 chr10 6002721 6002771 -139586517 + Charlie1a DNA MER1_type 65 108 -2653 2101 108 7 7 chr10 6002771 6003077 -139586211 - AluSq SINE Alu -7 306 1 1493 178 176 69 chr10 6003077 6003222 -139586066 + Charlie1a DNA MER1_type 108 236 -2525 1857 140 3 3 chr10 6003222 6003515 -139585773 + AluSp SINE Alu 5 297 -16 1493 178 176 69 chr10 6003515 6003553 -139585735 + Charlie1a DNA MER1_type 236 269 -2492 1646 171 11 0 chr10 6003553 6003840 -139585448 + AluSx SINE Alu 1 290 -22 1493 178 176 69 chr10 6003840 6004143 -139585145 + Charlie1a DNA MER1_type 269 661 -794 2157 91 0 0 chr10 6004143 6004428 -139584860 + AluSc SINE Alu 1 285 -24 291 93 0 0 chr10 6004544 6004587 -139584701 + (TA)n Simple_repeat Simple_repeat 2 44 0 1008 235 81 59 chr10 6004587 6004669 -139584619 + L1ME2 LINE L1 5685 5764 -400 1863 152 0 26 chr10 6004669 6004971 -139584317 - AluSx SINE Alu -18 294 1 1008 235 81 59 chr10 6004971 6005296 -139583992 + L1ME2 LINE L1 5764 6101 -63 270 216 69 78 chr10 6005344 6005446 -139583842 - HsTC2 DNA Tc2 -2 1896 1796 1940 138 10 0 chr10 6006560 6006851 -139582437 + AluSx SINE Alu 1 294 -18 450 258 113 32 chr10 6006857 6007043 -139582245 - LTR33A LTR ERVL -26 497 297 581 188 257 10 chr10 6007590 6007640 -139581648 + MER69 DNA AcHobo 2183 2219 -307 1674 160 0 53 chr10 6007640 6007960 -139581328 + AluSx SINE Alu 1 304 0 581 188 257 10 chr10 6007960 6008110 -139581178 + MER69 DNA AcHobo 2219 2434 -92 3531 225 47 77 chr10 6008281 6009475 -139579813 - L1MCc LINE L1 -2898 4043 2989 2025 151 0 0 chr10 6009475 6009787 -139579501 - AluSx SINE Alu 0 312 1 3531 225 47 77 chr10 6009787 6011009 -139578279 - L1MCc LINE L1 -3952 2989 1732 369 167 154 0 chr10 6011025 6011103 -139578185 - MLT1B LTR MaLR -300 90 1 511 248 76 0 chr10 6011107 6011430 -139577858 - L1MCc LINE L1 -4851 1571 1198 865 209 6 17 chr10 6011438 6011610 -139577678 + MER45A DNA AcHobo 1 170 -8 827 126 0 15 chr10 6012330 6012465 -139576823 + FLAM_C SINE Alu 1 133 0 751 266 55 44 chr10 6012489 6012764 -139576524 - MLT1J LTR MaLR -34 477 200 695 163 8 16 chr10 6012962 6013085 -139576203 + FLAM_C SINE Alu 2 123 -10 22 35 0 0 chr10 6013343 6013372 -139575916 + AT_rich Low_complexity Low_complexity 1 29 0 2222 113 0 0 chr10 6013475 6013785 -139575503 + AluSx SINE Alu 1 310 0 6021 52 1 1 chr10 6013921 6014702 -139574586 + L1PA3 LINE L1 5375 6155 0 180 77 0 0 chr10 6014712 6014738 -139574550 + (A)n Simple_repeat Simple_repeat 1 26 0 1051 166 4 4 chr10 6014738 6016098 -139573190 - ALR/Alpha Satellite centromeric 0 1360 1 1806 180 10 10 chr10 6016647 6016947 -139572341 - AluJb SINE Alu -8 304 5 1417 118 14 5 chr10 6017360 6017580 -139571708 + Charlie3 DNA MER1_type 2485 2706 -4 2339 104 3 0 chr10 6017794 6018091 -139571197 - AluSp SINE Alu -14 299 2 317 195 103 0 chr10 6018106 6018193 -139571095 - MLT1J LTR MaLR -28 483 388 2442 74 0 10 chr10 6018978 6019287 -139570001 - AluSc SINE Alu -3 306 1 216 0 0 0 chr10 6019291 6019315 -139569973 + (TTTTG)n Simple_repeat Simple_repeat 2 25 0 1838 116 0 0 chr10 6020202 6020443 -139568845 - AluSx SINE Alu -14 298 58 676 158 38 15 chr10 6020498 6020671 -139568617 + FLAM_C SINE Alu 6 181 0 1672 144 0 4 chr10 6021452 6021688 -139567600 + AluJo SINE Alu 1 235 -77 828 257 155 40 chr10 6021856 6022018 -139567270 + HAL1 LINE L1 1172 1314 -1193 2305 109 3 0 chr10 6022018 6022312 -139566976 + AluSx SINE Alu 1 295 -17 828 257 155 40 chr10 6022312 6022569 -139566719 + HAL1 LINE L1 1314 1639 -868 1071 138 25 0 chr10 6022573 6022732 -139566556 + FRAM SINE Alu 8 170 -6 625 220 38 6 chr10 6022733 6022892 -139566396 + HAL1 LINE L1 1623 1786 -721 2047 108 41 7 chr10 6022941 6023236 -139566052 + AluSx SINE Alu 1 305 -7 363 333 35 0 chr10 6023485 6023656 -139565632 - HAL1 LINE L1 -614 1893 1717 312 185 33 22 chr10 6023753 6023845 -139565443 + HAL1 LINE L1 2319 2411 -96 480 305 72 19 chr10 6024276 6024538 -139564750 - L2 LINE L2 -811 2503 2228 2004 199 52 22 chr10 6024964 6025422 -139563866 + L1MC3 LINE L1 5607 6078 -1707 2176 93 20 13 chr10 6025422 6025722 -139563566 - AluSx SINE Alu -10 302 1 326 175 34 3 chr10 6025746 6025816 -139563472 + AluS SINE Alu 3 57 -243 258 253 40 0 chr10 6025994 6026069 -139563219 - LTR67 LTR ERVL -2 555 478 226 202 165 28 chr10 6026084 6026193 -139563095 + AluJb SINE Alu 5 128 -174 1026 144 0 6 chr10 6027771 6027938 -139561350 - FRAM SINE Alu 0 166 1 2264 115 0 0 chr10 6028708 6029003 -139560285 - AluSq SINE Alu -18 295 1 207 0 0 0 chr10 6030194 6030217 -139559071 + (A)n Simple_repeat Simple_repeat 1 23 0 1626 172 0 12 chr10 6030523 6030779 -139558509 + AluJb SINE Alu 2 254 -58 201 74 0 0 chr10 6030791 6030818 -139558470 + (CAAAA)n Simple_repeat Simple_repeat 3 29 0 3982 78 18 12 chr10 6030930 6031497 -139557791 + L1PA8A LINE L1 5562 6131 0 2116 104 24 0 chr10 6032226 6032513 -139556775 - AluSx SINE Alu -18 294 1 386 393 13 13 chr10 6032938 6033162 -139556126 - MIR SINE MIR -3 259 36 200 438 20 7 chr10 6033216 6033369 -139555919 + L2 LINE L2 3116 3270 -2 238 83 0 42 chr10 6033637 6033685 -139555603 + (TCC)n Simple_repeat Simple_repeat 3 48 0 1788 168 7 7 chr10 6034282 6034586 -139554702 + AluJo SINE Alu 1 304 -8 3207 106 11 44 chr10 6035221 6035395 -139553893 - L1MA5A LINE L1 -1 6296 6118 2269 115 0 3 chr10 6035395 6035700 -139553588 - AluSx SINE Alu -3 309 6 3207 106 11 44 chr10 6035700 6036099 -139553189 - L1MA5A LINE L1 -179 6118 5742 1951 137 20 10 chr10 6036174 6036473 -139552815 - AluJb SINE Alu -10 302 1 533 280 125 41 chr10 6036544 6037339 -139551949 - L2 LINE L2 -13 3300 2353 208 242 0 16 chr10 6037400 6037462 -139551826 - L2 LINE L2 -1522 1792 1732 24 67 0 0 chr10 6038534 6038579 -139550709 + AT_rich Low_complexity Low_complexity 1 45 0 1941 138 7 14 chr10 6038605 6038895 -139550393 + AluSx SINE Alu 7 294 -18 2153 102 0 36 chr10 6038998 6039191 -139550097 + L1PA15 LINE L1 5845 6023 -142 1836 154 33 10 chr10 6039191 6039490 -139549798 + AluJb SINE Alu 1 306 -6 2153 102 0 36 chr10 6039490 6039629 -139549659 + L1PA15 LINE L1 6023 6165 0 2106 82 16 0 chr10 6039696 6039953 -139549335 + AluSx SINE Alu 1 261 -51 904 71 18 0 chr10 6039997 6040109 -139549179 + AluSg/x SINE Alu 183 296 -14 28 0 0 0 chr10 6040779 6040807 -139548481 + AT_rich Low_complexity Low_complexity 1 28 0 1240 219 119 46 chr10 6041377 6041898 -139547390 + MLT1E3 LTR MaLR 32 590 -34 2246 108 3 10 chr10 6042047 6042352 -139546936 - AluSc SINE Alu -6 303 1 227 178 171 112 chr10 6042361 6042513 -139546775 - L1MC4 LINE L1 -2 8040 7880 364 280 21 0 chr10 6042607 6042700 -139546588 - MIR SINE MIR -108 154 60 286 284 0 0 chr10 6042742 6042816 -139546472 - LTR33A LTR ERVL -1 522 449 303 308 60 8 chr10 6043047 6043180 -139546108 + MIR3 SINE MIR 51 190 -18 475 203 92 26 chr10 6043709 6043862 -139545426 + LTR67 LTR ERVL 395 557 0 619 197 15 22 chr10 6043864 6044001 -139545287 - MIR SINE MIR -64 198 63 1792 167 24 17 chr10 6044056 6044378 -139544910 + AluJb SINE Alu 1 312 0 1059 163 5 16 chr10 6044612 6044796 -139544492 - AluJb SINE Alu -10 302 121 587 108 32 0 chr10 6044900 6044993 -139544295 - AluJ/FLAM SINE Alu -215 97 2 3424 229 111 3 chr10 6045064 6046011 -139543277 - L1MC4 LINE L1 -237 7805 6757 2355 110 0 10 chr10 6046011 6046033 -139543255 - AluSx SINE Alu -5 307 286 264 100 0 0 chr10 6046033 6046073 -139543215 + (CTTG)n Simple_repeat Simple_repeat 2 41 0 2355 110 0 10 chr10 6046073 6046360 -139542928 - AluSx SINE Alu -26 286 1 428 214 9 0 chr10 6046622 6046734 -139542554 + (ATG)n Simple_repeat Simple_repeat 2 114 0 412 192 73 136 chr10 6047683 6047860 -139541428 + MER5A DNA MER1_type 24 189 0 1988 228 108 67 chr10 6048641 6049122 -139540166 - MER21B LTR ERV1 -51 812 287 2125 117 10 0 chr10 6049122 6049412 -139539876 - AluSx SINE Alu -19 293 1 1988 228 108 67 chr10 6049412 6049693 -139539595 - MER21B LTR ERV1 -576 287 19 323 257 89 20 chr10 6050592 6050693 -139538595 - L2 LINE L2 -16 3297 3190 2067 114 3 31 chr10 6050854 6051141 -139538147 + AluJb SINE Alu 2 281 -31 216 0 0 0 chr10 6051141 6051165 -139538123 + (CA)n Simple_repeat Simple_repeat 2 25 0 2067 114 3 31 chr10 6051165 6051194 -139538094 + AluJb SINE Alu 281 309 -3 22 35 0 0 chr10 6051647 6051676 -139537612 + GC_rich Low_complexity Low_complexity 1 29 0 28 29 0 0 chr10 6051717 6051752 -139537536 + GC_rich Low_complexity Low_complexity 1 35 0 347 238 220 24 chr10 6054368 6054536 -139534752 - LTR33 LTR ERVL -241 280 80 197 271 208 0 chr10 6054796 6054892 -139534396 - L2 LINE L2 0 3272 3157 2009 132 3 17 chr10 6055556 6055852 -139533436 + AluJo SINE Alu 7 298 -14 2424 88 3 0 chr10 6056060 6056366 -139532922 + AluSx SINE Alu 1 307 -5 1027 89 0 182 chr10 6056378 6056614 -139532674 + 7SK RNA RNA 1 193 0 1031 116 103 1 chr10 6056631 6056838 -139532450 - L1MA5A LINE L1 -421 5876 5652 1991 131 10 16 chr10 6057093 6057398 -139531890 + AluSx SINE Alu 1 303 -9 2097 139 0 7 chr10 6057470 6057780 -139531508 + AluSx SINE Alu 1 308 -4 286 235 82 20 chr10 6058696 6058794 -139530494 - MER5B DNA MER1_type -14 164 61 416 271 49 7 chr10 6058794 6058938 -139530350 + MER112 DNA MER1_type 94 243 -17 1714 187 3 13 chr10 6059350 6059649 -139529639 + AluJb SINE Alu 2 297 -15 2151 116 33 7 chr10 6059651 6059953 -139529335 + AluSx SINE Alu 1 310 -2 273 263 63 0 chr10 6060079 6060174 -139529114 - L2 LINE L2 -27 3286 3186 2246 92 3 3 chr10 6060325 6060619 -139528669 + AluSx SINE Alu 1 294 -18 490 268 121 53 chr10 6060757 6061002 -139528286 - L2 LINE L2 -342 2972 2745 2169 125 0 7 chr10 6061002 6061299 -139527989 - AluSx SINE Alu -15 297 3 490 268 121 53 chr10 6061299 6061539 -139527749 - L2 LINE L2 -569 2745 2454 2654 46 0 7 chr10 6061951 6062257 -139527031 - AluY SINE Alu -7 304 1 700 161 0 15 chr10 6062721 6062851 -139526437 - L1PB4 LINE L1 -101 6055 5928 315 0 0 0 chr10 6062883 6062918 -139526370 + (TG)n Simple_repeat Simple_repeat 2 36 0 1735 172 7 14 chr10 6062919 6063209 -139526079 - AluJb SINE Alu -24 288 1 189 0 0 0 chr10 6063239 6063260 -139526028 + (TTAA)n Simple_repeat Simple_repeat 2 22 0 1929 108 75 4 chr10 6063261 6063539 -139525749 - AluSg SINE Alu -12 298 1 991 123 20 27 chr10 6063675 6063821 -139525467 - AluSq/x SINE Alu -167 145 1 460 267 87 20 chr10 6063824 6063974 -139525314 - HERV16 LTR ERVL -3144 1852 1693 * 491 370 26 18 chr10 6063970 6064243 -139525045 + ERVL LTR ERVL 3652 3926 -1838 1821 145 48 3 chr10 6064245 6064534 -139524754 + AluSq SINE Alu 1 302 -11 1049 116 0 7 chr10 6064942 6065088 -139524200 + AluSq/x SINE Alu 2 146 -166 508 141 0 0 chr10 6065088 6065166 -139524122 + AluS SINE Alu 221 298 -12 471 278 143 30 chr10 6065851 6066186 -139523102 + LTR16A LTR ERVL 61 433 -17 234 296 0 20 chr10 6066485 6066583 -139522705 + A-rich Low_complexity Low_complexity 2 97 0 1438 174 17 20 chr10 6066768 6067061 -139522227 - AluSq SINE Alu -21 292 1 244 323 23 46 chr10 6067288 6067418 -139521870 + MIR SINE MIR 136 262 0 182 304 0 0 chr10 6067589 6067635 -139521653 + L2 LINE L2 3252 3297 -16 1071 92 0 0 chr10 6067641 6067794 -139521494 + (TGGA)n Simple_repeat Simple_repeat 4 156 0 796 157 0 29 chr10 6067813 6068256 -139521032 + (TGGA)n Simple_repeat Simple_repeat 1 429 0 337 271 75 40 chr10 6069043 6069242 -139520046 - L1ME4a LINE L1 -116 6005 5800 634 280 21 5 chr10 6069431 6069620 -139519668 + LTR16A1 LTR ERVL 252 443 -14 291 250 0 12 chr10 6069637 6069717 -139519571 - L1ME4a LINE L1 -318 5803 5725 2280 97 30 0 chr10 6071885 6072184 -139517104 + AluSx SINE Alu 1 308 -4 2303 119 3 0 chr10 6072192 6072503 -139516785 + AluSx SINE Alu 1 312 0 1698 148 26 22 chr10 6072516 6072827 -139516461 - MER47A DNA MER2_type -54 312 1 2243 90 10 10 chr10 6073260 6073549 -139515739 - AluSx SINE Alu -23 289 1 2363 97 0 7 chr10 6074091 6074391 -139514897 + AluSg1 SINE Alu 1 298 -11 228 259 65 9 chr10 6074589 6074697 -139514591 - L1P4 LINE L1 -312 5851 5738 338 314 134 23 chr10 6074729 6074901 -139514387 - L1ME LINE L1 -332 5789 5599 2361 110 3 0 chr10 6075312 6075620 -139513668 - AluSg SINE Alu -1 309 1 516 247 16 59 chr10 6076208 6076394 -139512894 + MER5B DNA MER1_type 1 178 0 1072 125 96 82 chr10 6076443 6076722 -139512566 - MLT1A1 LTR MaLR -3 425 69 2485 59 0 20 chr10 6076722 6077025 -139512263 - AluY SINE Alu -14 297 1 1072 125 96 82 chr10 6077025 6077095 -139512193 - MLT1A1 LTR MaLR -359 69 1 4765 147 20 71 chr10 6077332 6078102 -139511186 - L1MA7 LINE L1 -4 6287 5479 2439 92 3 9 chr10 6078102 6078417 -139510871 - AluSp SINE Alu 0 313 1 4765 147 20 71 chr10 6078417 6078656 -139510632 - L1MA7 LINE L1 -812 5479 5333 2123 120 0 14 chr10 6078656 6078948 -139510340 - AluSx SINE Alu -6 306 19 4765 147 20 71 chr10 6078948 6079002 -139510286 - L1MA7 LINE L1 -958 5333 5278 242 246 16 127 chr10 6079327 6079453 -139509835 + MIR SINE MIR 81 192 -70 635 223 114 0 chr10 6080465 6080631 -139508657 + L1PA16 LINE L1 5962 6146 -20 29 28 0 0 chr10 6080631 6080667 -139508621 + AT_rich Low_complexity Low_complexity 1 36 0 2172 106 0 10 chr10 6080667 6081025 -139508263 + AluSx SINE Alu 1 355 0 691 91 10 0 chr10 6081477 6081576 -139507712 + HY3 scRNA scRNA 1 100 -1 1826 133 0 46 chr10 6081592 6081906 -139507382 + AluJb SINE Alu 14 314 0 2330 108 0 0 chr10 6081914 6082209 -139507079 + AluSg SINE Alu 1 295 -15 364 259 184 6 chr10 6082209 6082367 -139506921 + MIR3 SINE MIR 22 207 -1 800 164 31 0 chr10 6083156 6083284 -139506004 + AluJo SINE Alu 4 135 -177 1873 182 0 7 chr10 6083284 6083591 -139505697 + AluJo SINE Alu 1 305 -7 283 283 0 0 chr10 6084241 6084301 -139504987 + L2 LINE L2 3203 3262 -10 2314 115 0 0 chr10 6084421 6084716 -139504572 + AluSx SINE Alu 1 295 -17 881 183 11 123 chr10 6085025 6085165 -139504123 + L1MD3 LINE L1 7009 7102 -893 1705 165 13 22 chr10 6085165 6085480 -139503808 + AluJo SINE Alu 1 312 0 881 183 11 123 chr10 6085480 6085624 -139503664 + L1MD3 LINE L1 7102 7261 -734 871 122 46 8 chr10 6085628 6085759 -139503529 - AluJo SINE Alu -176 136 1 613 186 8 0 chr10 6085761 6085879 -139503409 + MLT1F1 LTR MaLR 2 120 -447 2573 163 48 39 chr10 6085883 6086104 -139503184 + L1MD3 LINE L1 7403 7621 -374 2359 94 0 7 chr10 6086104 6086401 -139502887 + AluSg SINE Alu 1 295 -15 2573 163 48 39 chr10 6086401 6086745 -139502543 + L1MD3 LINE L1 7621 7973 -22 2063 115 3 0 chr10 6086745 6087031 -139502257 + AluSx SINE Alu 1 287 -25 445 212 71 0 chr10 6087235 6087334 -139501954 - Charlie2 DNA MER1_type -2714 148 43 2082 131 0 0 chr10 6087336 6087626 -139501662 + AluJb SINE Alu 2 291 -21 215 287 59 20 chr10 6087955 6088056 -139501232 + MIR SINE MIR 60 164 -98 4193 85 5 0 chr10 6088162 6088752 -139500536 + L1PA12 LINE L1 5576 6168 0 225 0 0 0 chr10 6088806 6088831 -139500457 + (T)n Simple_repeat Simple_repeat 1 25 0 2139 148 0 0 chr10 6088844 6089154 -139500134 + AluSx SINE Alu 1 310 -2 2019 138 10 0 chr10 6089443 6089732 -139499556 + AluJb SINE Alu 1 292 -20 372 299 59 18 chr10 6090115 6090336 -139498952 - L2 LINE L2 -263 3050 2821 180 316 38 13 chr10 6090983 6091062 -139498226 - MIR SINE MIR -117 145 65 2365 109 0 0 chr10 6091242 6091554 -139497734 + AluSx SINE Alu 1 312 0 23 0 0 0 chr10 6091554 6091577 -139497711 + AT_rich Low_complexity Low_complexity 1 23 0 22 0 0 0 chr10 6092030 6092052 -139497236 + AT_rich Low_complexity Low_complexity 1 22 0 2564 64 0 0 chr10 6096293 6096589 -139492699 + AluSq SINE Alu 1 296 -17 451 262 115 47 chr10 6096785 6096976 -139492312 - MIR SINE MIR -22 240 37 893 179 11 17 chr10 6097286 6097568 -139491720 + MER1B DNA MER1_type 1 339 0 256 291 22 82 chr10 6099468 6099650 -139489638 - MIR3 SINE MIR -3 205 35 284 246 16 0 chr10 6099752 6099813 -139489475 - MIR SINE MIR -105 157 96 2440 80 0 0 chr10 6100204 6100505 -139488783 - AluSx SINE Alu -11 301 1 180 228 0 0 chr10 6100818 6100875 -139488413 + (CACG)n Simple_repeat Simple_repeat 2 58 0 1996 137 3 20 chr10 6102524 6102830 -139486458 + AluJb SINE Alu 2 302 -10 2119 104 28 7 chr10 6103392 6103681 -139485607 + AluSp SINE Alu 1 295 -18 1004 230 59 45 chr10 6104601 6104975 -139484313 + L1MB5 LINE L1 5795 6173 -1 217 186 12 12 chr10 6106137 6106223 -139483065 + (CA)n Simple_repeat Simple_repeat 1 86 0 264 272 11 11 chr10 6106244 6106336 -139482952 + (CA)n Simple_repeat Simple_repeat 2 93 0 252 0 0 0 chr10 6106338 6106366 -139482922 + (CAG)n Simple_repeat Simple_repeat 2 29 0 1941 146 0 4 chr10 6106912 6107192 -139482096 + AluJo SINE Alu 7 285 -27 225 94 0 0 chr10 6107206 6107238 -139482050 + (TAAA)n Simple_repeat Simple_repeat 2 33 0 446 127 0 0 chr10 6107429 6107500 -139481788 + FLAM SINE Alu 58 128 -15 670 141 29 106 chr10 6108465 6108576 -139480712 + L1MB3 LINE L1 6027 6123 -60 2185 101 0 14 chr10 6108576 6108899 -139480389 + AluSx SINE Alu 1 319 0 670 141 29 106 chr10 6108899 6108956 -139480332 + L1MB3 LINE L1 6123 6183 0 421 251 48 18 chr10 6111388 6111555 -139477733 - MER5B DNA MER1_type -2 176 5 260 203 18 74 chr10 6111823 6111986 -139477302 + (CCCCAG)n Simple_repeat Simple_repeat 5 158 0 760 181 17 23 chr10 6112615 6112792 -139476496 + L1PA16 LINE L1 5991 6166 0 1877 137 27 21 chr10 6112870 6113205 -139476083 - MER1B DNA MER1_type 0 337 1 1433 156 71 7 chr10 6113786 6114055 -139475233 - AluJo SINE Alu -25 287 2 876 149 0 0 chr10 6114508 6114649 -139474639 + FLAM_C SINE Alu 1 141 -2 336 45 0 0 chr10 6116249 6116293 -139472995 + tRNA-Cys-TGC tRNA tRNA 1 44 -31 920 74 16 0 chr10 6116302 6116424 -139472864 + AluYb8 SINE Alu 3 126 -192 313 164 30 30 chr10 6116425 6116492 -139472796 + AluY SINE Alu 76 142 -159 313 164 30 30 chr10 6116475 6116542 -139472746 + AluY SINE Alu 76 142 -159 313 164 30 30 chr10 6116525 6116592 -139472696 + AluY SINE Alu 76 142 -159 313 164 30 30 chr10 6116575 6116642 -139472646 + AluY SINE Alu 76 142 -159 313 164 30 30 chr10 6116625 6116692 -139472596 + AluY SINE Alu 76 142 -159 304 142 63 24 chr10 6116675 6116725 -139472563 + AluSc SINE Alu 76 99 -200 * 1815 64 8 0 chr10 6116725 6116959 -139472329 + AluY SINE Alu 76 311 0 304 142 63 24 chr10 6116959 6116989 -139472299 + AluSc SINE Alu 99 126 -173 2169 79 41 0 chr10 6117256 6117547 -139471741 + AluY SINE Alu 1 303 -8 1808 103 38 0 chr10 6117571 6117834 -139471454 + AluSq SINE Alu 29 301 -12 198 0 0 0 chr10 6118914 6118936 -139470352 + (A)n Simple_repeat Simple_repeat 1 22 0 1645 150 31 14 chr10 6118936 6119223 -139470065 + AluJo SINE Alu 1 292 -20 1552 164 0 69 chr10 6119716 6119858 -139469430 + AluJo SINE Alu 1 151 -167 207 0 0 0 chr10 6119858 6119881 -139469407 + (TCTCCC)n Simple_repeat Simple_repeat 1 23 0 9831 33 16 103 chr10 6119881 6121333 -139467955 + SVA Other Other 57 1382 -4 1552 164 0 69 chr10 6121333 6121528 -139467760 + AluJo SINE Alu 149 318 0 2292 106 0 0 chr10 6121615 6121927 -139467361 + AluSx SINE Alu 1 312 0 22 35 0 0 chr10 6123171 6123200 -139466088 + GC_rich Low_complexity Low_complexity 1 29 0 330 311 8 0 chr10 6123382 6123501 -139465787 + GA-rich Low_complexity Low_complexity 2 121 0 35 83 0 0 chr10 6123799 6123883 -139465405 + GC_rich Low_complexity Low_complexity 1 84 0 23 33 0 0 chr10 6124137 6124167 -139465121 + GC_rich Low_complexity Low_complexity 1 30 0 254 269 16 44 chr10 6125714 6125896 -139463392 + (CCCCG)n Simple_repeat Simple_repeat 2 178 0 * 303 243 0 58 chr10 6125814 6125917 -139463371 + C-rich Low_complexity Low_complexity 6 102 0 22 0 0 0 chr10 6126621 6126643 -139462645 + GC_rich Low_complexity Low_complexity 1 22 0 212 292 19 97 chr10 6127085 6127239 -139462049 - MIR3 SINE MIR -3 205 64 1631 143 10 67 chr10 6127497 6127811 -139461477 + AluJb SINE Alu 7 302 -10 961 144 24 0 chr10 6128343 6128510 -139460778 + L1MC1 LINE L1 5682 5852 -481 2267 97 0 0 chr10 6128511 6128801 -139460487 + AluSx SINE Alu 1 290 -22 1657 129 0 12 chr10 6129017 6129273 -139460015 - AluSx SINE Alu 0 312 60 436 313 56 28 chr10 6129283 6129462 -139459826 + L1 LINE L1 3589 3772 -2374 959 166 57 26 chr10 6129462 6129655 -139459633 + Tigger2a DNA MER2_type 1 199 -235 1735 146 3 7 chr10 6129762 6130016 -139459272 - Tigger3(Golem) DNA MER2_type 0 3028 2773 1938 116 29 0 chr10 6130016 6130316 -139458972 + AluSx SINE Alu 1 308 0 1735 146 3 7 chr10 6130316 6130348 -139458940 - Tigger3(Golem) DNA MER2_type -255 2773 2742 721 155 0 9 chr10 6130350 6130466 -139458822 + AluJ SINE Alu 1 115 -197 2038 147 99 27 chr10 6130466 6130967 -139458321 + MLT2A2 LTR ERVL 2 554 0 1238 127 5 20 chr10 6130967 6131164 -139458124 + AluJ SINE Alu 110 303 -9 2119 124 3 0 chr10 6132124 6132431 -139456857 + AluSx SINE Alu 4 311 -1 410 331 127 19 chr10 6132552 6132875 -139456413 - L3 LINE CR1 -28 1549 1192 1264 177 88 113 chr10 6133270 6133723 -139455565 + LTR7 LTR ERV1 1 442 -8 349 325 68 0 chr10 6133747 6133864 -139455424 + L2 LINE L2 3148 3272 0 1465 176 21 35 chr10 6133910 6134223 -139455065 - AluJo SINE Alu 0 309 1 193 366 37 12 chr10 6134334 6134416 -139454872 + MIR SINE MIR 129 212 -50 414 0 0 0 chr10 6134579 6134625 -139454663 + (CA)n Simple_repeat Simple_repeat 2 47 0 243 88 0 0 chr10 6134905 6134939 -139454349 + (A)n Simple_repeat Simple_repeat 1 34 0 387 0 0 0 chr10 6135103 6135146 -139454142 + (TG)n Simple_repeat Simple_repeat 2 44 0 184 337 12 12 chr10 6135331 6135414 -139453874 + L3 LINE CR1 1111 1193 -384 183 358 62 0 chr10 6135702 6135783 -139453505 + MIR SINE MIR 43 128 -80 1750 160 0 10 chr10 6136203 6136497 -139452791 + AluSx SINE Alu 1 291 -21 341 203 14 14 chr10 6136550 6136624 -139452664 + L1MC4 LINE L1 6919 6992 -1050 802 175 7 7 chr10 6136624 6136761 -139452527 - FLAM_C SINE Alu -2 141 5 2244 214 65 93 chr10 6136762 6137041 -139452247 + L1MC4 LINE L1 6976 7261 -781 2238 107 0 0 chr10 6137041 6137341 -139451947 + AluSx SINE Alu 1 300 -12 2244 214 65 93 chr10 6137341 6137470 -139451818 + L1MC4 LINE L1 7261 7392 -650 2327 80 0 0 chr10 6137470 6137770 -139451518 + AluSx SINE Alu 1 300 -12 2244 214 65 93 chr10 6137770 6137964 -139451324 + L1MC4 LINE L1 7392 7590 -452 2437 192 29 27 chr10 6137964 6138145 -139451143 + L1MB2 LINE L1 5646 5825 -346 2435 57 0 16 chr10 6138145 6138460 -139450828 + AluY SINE Alu 2 311 0 2437 192 29 27 chr10 6138460 6138800 -139450488 + L1MB2 LINE L1 5825 6168 -3 2244 214 65 93 chr10 6138800 6139151 -139450137 + L1MC4 LINE L1 7590 7904 -138 183 80 0 0 chr10 6139188 6139213 -139450075 + (CA)n Simple_repeat Simple_repeat 2 26 0 342 115 0 0 chr10 6139273 6139325 -139449963 + (TAGA)n Simple_repeat Simple_repeat 1 52 0 479 200 61 9 chr10 6139336 6139451 -139449837 + L1MC4 LINE L1 7918 8038 -4 1923 141 0 16 chr10 6139897 6140201 -139449087 - AluSx SINE Alu -13 299 1 463 281 113 20 chr10 6140201 6140404 -139448884 - MLT1J LTR MaLR -289 222 1 952 112 8 0 chr10 6140482 6140616 -139448672 + AluJo SINE Alu 1 135 -177 239 218 0 18 chr10 6141007 6141062 -139448226 + MLT1L LTR MaLR 556 609 -6 25 51 0 0 chr10 6141114 6141153 -139448135 + AT_rich Low_complexity Low_complexity 1 39 0 2339 86 3 0 chr10 6141340 6141643 -139447645 + AluSq SINE Alu 1 304 -9 655 157 10 0 chr10 6142379 6142481 -139446807 + FLAM_C SINE Alu 6 108 -35 2177 114 0 3 chr10 6142491 6142797 -139446491 + AluSq SINE Alu 4 308 -5 211 338 26 0 chr10 6142797 6142874 -139446414 + MER5B DNA MER1_type 33 111 -67 2062 139 0 0 chr10 6142907 6143217 -139446071 + AluSx SINE Alu 1 310 -2 2441 59 0 10 chr10 6143265 6143572 -139445716 + AluY SINE Alu 1 304 -7 215 79 26 0 chr10 6143600 6143638 -139445650 + (TA)n Simple_repeat Simple_repeat 2 40 0 751 94 0 0 chr10 6143646 6143742 -139445546 - AluS SINE Alu -215 97 2 2650 168 24 43 chr10 6145155 6145424 -139443864 - L1MB3 LINE L1 0 6183 5911 1650 160 76 0 chr10 6145424 6145712 -139443576 - AluJo SINE Alu -2 310 1 2650 168 24 43 chr10 6145712 6145932 -139443356 - L1MB3 LINE L1 -272 5911 5702 1318 225 13 22 chr10 6145932 6146243 -139443045 + AluJo SINE Alu 1 308 -4 2650 168 24 43 chr10 6146243 6146289 -139442999 - L1MB3 LINE L1 -481 5702 5657 1726 176 13 0 chr10 6146490 6146791 -139442497 + AluJo SINE Alu 5 309 -3 340 280 75 0 chr10 6146803 6146896 -139442392 + L1ME4a LINE L1 5964 6063 -58 183 129 0 0 chr10 6147008 6147039 -139442249 + (TCCA)n Simple_repeat Simple_repeat 4 34 0 913 106 8 8 chr10 6147062 6147194 -139442094 - FLAM_C SINE Alu -1 132 1 400 236 8 79 chr10 6147978 6148105 -139441183 + MIR SINE MIR 35 152 -110 236 345 159 0 chr10 6148152 6148297 -139440991 - MIR SINE MIR 0 262 95 2128 93 23 13 chr10 6149433 6149919 -139439369 + AluSq SINE Alu 1 313 0 1435 165 85 0 chr10 6150574 6150834 -139438454 + AluJo SINE Alu 1 282 -30 997 296 173 18 chr10 6150878 6151544 -139437744 - L1ME3A LINE L1 -54 6116 5348 284 314 51 7 chr10 6151675 6151812 -139437476 + MIR SINE MIR 16 158 -104 1899 123 23 13 chr10 6152148 6152456 -139436832 + AluSq SINE Alu 3 313 0 260 191 0 0 chr10 6153060 6153107 -139436181 - MIR3 SINE MIR -54 154 108 257 266 41 101 chr10 6154047 6154314 -139434974 - L2 LINE L2 -185 3087 2837 1667 149 0 0 chr10 6154421 6154669 -139434619 - AluJb SINE Alu -15 297 50 371 320 29 0 chr10 6154669 6154772 -139434516 + MIR SINE MIR 69 174 -88 321 206 119 44 chr10 6155428 6155565 -139433723 - Charlie7 DNA MER1_type -4 2608 2456 1757 173 16 0 chr10 6155565 6155871 -139433417 + AluJo SINE Alu 1 311 -1 321 206 119 44 chr10 6155871 6155893 -139433395 - Charlie7 DNA MER1_type -156 2456 2437 2154 77 3 71 chr10 6155903 6156239 -139433049 + AluSp SINE Alu 1 313 0 671 171 106 0 chr10 6156681 6156804 -139432484 - AluJo SINE Alu -176 136 1 2045 103 14 3 chr10 6157999 6158289 -139430999 + AluSx SINE Alu 1 293 -19 444 262 0 16 chr10 6158784 6158910 -139430378 - MIR SINE MIR -126 136 13 2080 106 33 0 chr10 6160133 6160435 -139428853 + AluSp SINE Alu 1 312 -1 586 101 114 95 chr10 6160820 6160860 -139428428 + L1PA13 LINE L1 6001 6039 -124 1778 143 61 0 chr10 6160860 6160977 -139428311 + AluSx SINE Alu 1 109 -203 2138 88 3 7 chr10 6160977 6161272 -139428016 + AluSx SINE Alu 8 301 -11 1778 143 61 0 chr10 6161272 6161448 -139427840 + AluSx SINE Alu 109 312 0 586 101 114 95 chr10 6161448 6161565 -139427723 + L1PA13 LINE L1 6039 6161 -2 3779 183 45 51 chr10 6161793 6162754 -139426534 + LTR5 LTR ERVK 1 955 -14 405 278 30 0 chr10 6162768 6162901 -139426387 - L3 LINE CR1 -308 1269 1133 22 70 0 0 chr10 6163544 6163587 -139425701 + GC_rich Low_complexity Low_complexity 1 43 0 1640 233 79 56 chr10 6164205 6164850 -139424438 + L1MC4a LINE L1 6507 7166 -642 2799 159 43 0 chr10 6164862 6165379 -139423909 + L1MB3 LINE L1 5643 6181 -2 1124 181 0 23 chr10 6165389 6165604 -139423684 + AluJo SINE Alu 73 282 -30 326 200 0 0 chr10 6165608 6165663 -139423625 + L1MC4 LINE L1 6649 6703 -1339 * 341 278 40 32 chr10 6165634 6165760 -139423528 + L1MCa LINE L1 1996 2122 -4304 235 114 38 152 chr10 6165773 6165878 -139423410 + L1MC4a LINE L1 7160 7252 -556 258 187 120 27 chr10 6165933 6166008 -139423280 - L2 LINE L2 -348 2965 2884 1983 131 3 6 chr10 6166013 6166325 -139422963 + AluSq SINE Alu 1 311 -2 277 223 62 9 chr10 6166395 6166507 -139422781 - L1MC4 LINE L1 0 8042 7925 2166 89 7 10 chr10 6166510 6166812 -139422476 - AluSx SINE Alu -9 303 3 1512 189 38 0 chr10 6167191 6167482 -139421806 + AluJb SINE Alu 1 302 -10 2024 95 29 13 chr10 6167525 6167831 -139421457 - AluSp SINE Alu 0 313 3 342 145 0 32 chr10 6167834 6167896 -139421392 - FAM SINE Alu -1 178 119 1741 102 8 0 chr10 6168033 6168269 -139421019 + AluSx SINE Alu 16 253 -59 26 64 0 0 chr10 6168269 6168316 -139420972 + AT_rich Low_complexity Low_complexity 1 47 0 2065 107 0 3 chr10 6168528 6168817 -139420471 - AluSx SINE Alu -24 288 1 21 0 0 0 chr10 6168817 6168838 -139420450 + AT_rich Low_complexity Low_complexity 1 21 0 825 142 0 8 chr10 6168838 6168972 -139420316 - AluSq/x SINE Alu -179 133 1 189 0 0 0 chr10 6169730 6169751 -139419537 + (A)n Simple_repeat Simple_repeat 1 21 0 225 208 21 0 chr10 6170677 6170725 -139418563 + (TATATG)n Simple_repeat Simple_repeat 2 50 0 1600 154 35 3 chr10 6170766 6171051 -139418237 - AluJb SINE Alu -18 294 1 2058 129 0 7 chr10 6171374 6171683 -139417605 - AluSg SINE Alu -3 307 1 872 81 16 0 chr10 6171689 6171813 -139417475 - L1PB1 LINE L1 -3 6148 6023 742 136 8 0 chr10 6171814 6171932 -139417356 - L1PB1 LINE L1 -76 6075 5957 239 327 243 22 chr10 6172211 6172483 -139416805 - L2 LINE L2 -63 3209 2878 184 293 338 6 chr10 6172684 6172841 -139416447 - MIR SINE MIR -6 256 48 2255 95 0 3 chr10 6174010 6174314 -139414974 - AluSx SINE Alu -9 303 1 299 244 61 0 chr10 6174593 6174675 -139414613 + MIR3 SINE MIR 122 208 0 1635 164 10 7 chr10 6175395 6175688 -139413600 - AluSx SINE Alu -18 294 1 194 342 53 13 chr10 6175870 6175946 -139413342 - L2 LINE L2 -62 3210 3132 354 349 34 34 chr10 6176188 6176363 -139412925 + MER5B DNA MER1_type 2 176 -2 299 269 186 26 chr10 6176430 6176586 -139412702 - MER5A DNA MER1_type 0 189 9 826 163 0 15 chr10 6176663 6176798 -139412490 + FLAM_C SINE Alu 1 133 0 815 128 0 0 chr10 6177866 6177983 -139411305 + FLAM_C SINE Alu 2 118 -15 23 33 0 0 chr10 6177983 6178013 -139411275 + AT_rich Low_complexity Low_complexity 1 30 0 372 330 92 42 chr10 6178253 6178492 -139410796 - MIR SINE MIR -10 252 2 395 213 117 0 chr10 6179182 6179276 -139410012 - L2 LINE L2 0 3272 3168 234 0 0 0 chr10 6179816 6179842 -139409446 + (TA)n Simple_repeat Simple_repeat 1 26 0 2199 84 7 3 chr10 6179842 6180141 -139409147 + AluSx SINE Alu 2 301 -11 216 0 0 0 chr10 6180141 6180165 -139409123 + (TA)n Simple_repeat Simple_repeat 2 25 0 1965 101 7 30 chr10 6181009 6181306 -139407982 - AluSx SINE Alu -22 290 1 290 262 78 10 chr10 6181309 6181412 -139407876 - MIR SINE MIR -115 147 38 2667 149 22 65 chr10 6182145 6182681 -139406607 + MLT2B2 LTR ERVL 3 515 0 319 321 136 0 chr10 6183022 6183162 -139406126 + MIR SINE MIR 93 251 -11 354 280 92 48 chr10 6183203 6183474 -139405814 + L2 LINE L2 2298 2580 -734 618 263 26 7 chr10 6183609 6183761 -139405527 + MIR SINE MIR 14 168 -94 268 173 27 55 chr10 6183789 6183899 -139405389 + (TTATA)n Simple_repeat Simple_repeat 5 111 0 34 24 0 0 chr10 6183968 6184009 -139405279 + AT_rich Low_complexity Low_complexity 1 41 0 189 292 62 0 chr10 6184592 6184640 -139404648 + MIR3 SINE MIR 157 207 -1 367 259 54 9 chr10 6184736 6184848 -139404440 - Charlie8 DNA MER1_type -1211 1206 1090 2422 175 24 37 chr10 6186993 6187485 -139401803 + MER66B LTR ERV1 1 486 0 28 0 0 0 chr10 6187770 6187798 -139401490 + AT_rich Low_complexity Low_complexity 1 28 0 2042 132 3 0 chr10 6187924 6188234 -139401054 + AluSx SINE Alu 2 312 0 868 277 79 38 chr10 6188357 6189041 -139400247 - L1ME3A LINE L1 -227 6337 5632 428 309 77 47 chr10 6189037 6189532 -139399756 - L1ME3A LINE L1 -1892 4648 4139 * 225 264 81 34 chr10 6189805 6189953 -139399335 - L1ME3A LINE L1 -3758 2782 2628 420 269 82 68 chr10 6189984 6190223 -139399065 - L1MEc LINE L1 -3926 2622 2371 2288 70 10 3 chr10 6190246 6190547 -139398741 + AluY SINE Alu 1 303 -8 462 338 61 19 chr10 6190677 6190890 -139398398 - L1M4 LINE L1 -1759 4387 4166 465 263 90 75 chr10 6192095 6192681 -139396607 - L1M4 LINE L1 -3424 2722 2128 554 272 125 0 chr10 6193083 6193267 -139396021 + MIR SINE MIR 56 262 0 591 232 137 42 chr10 6193463 6193631 -139395657 + MIR3 SINE MIR 20 203 -5 246 322 44 0 chr10 6194652 6194742 -139394546 + MER5A DNA MER1_type 9 102 -87 209 266 101 13 chr10 6195350 6195429 -139393859 + MIR SINE MIR 20 105 -103 361 220 13 0 chr10 6197750 6197838 -139391450 - L1ME2 LINE L1 -10 6223 6144 1037 254 38 38 chr10 6197847 6198317 -139390971 - L1ME2 LINE L1 -142 6091 5654 662 128 0 0 chr10 6198342 6198444 -139390844 - AluSx SINE Alu -2 308 207 819 156 0 0 chr10 6198444 6198566 -139390722 - AluSx SINE Alu -191 122 1 1426 233 88 67 chr10 6198570 6198939 -139390349 - L1ME2 LINE L1 -577 5656 5296 2350 77 0 3 chr10 6198939 6199250 -139390038 - AluY SINE Alu -1 310 1 1426 233 88 67 chr10 6199250 6199727 -139389561 - L1ME2 LINE L1 -937 5296 4794 430 250 127 26 chr10 6199850 6200030 -139389258 - L1ME2 LINE L1 -1648 4567 4350 717 45 0 0 chr10 6200030 6200119 -139389169 + (TA)n Simple_repeat Simple_repeat 2 90 0 430 250 127 26 chr10 6200119 6200206 -139389082 - L1ME2 LINE L1 -1865 4350 4273 3027 277 71 12 chr10 6200206 6201493 -139387795 - L1ME2 LINE L1 -3913 2483 1122 347 280 8 42 chr10 6201505 6201557 -139387731 - L1ME2 LINE L1 -5179 1026 974 2165 116 0 0 chr10 6201557 6201850 -139387438 + AluSx SINE Alu 1 293 -19 347 280 8 42 chr10 6201850 6201915 -139387373 - L1ME2 LINE L1 -5231 974 913 951 178 55 55 chr10 6201924 6202104 -139387184 - MER58A DNA MER1_type -2201 219 36 2062 104 0 0 chr10 6202104 6202439 -139386849 + AluSq SINE Alu 8 342 0 951 178 55 55 chr10 6202439 6202476 -139386812 - MER58A DNA MER1_type -2383 37 1 354 243 46 99 chr10 6202489 6202555 -139386733 - L1ME2 LINE L1 -5449 947 879 1729 129 42 17 chr10 6202555 6202842 -139386446 - AluSx SINE Alu -14 298 5 354 243 46 99 chr10 6202842 6203079 -139386209 - L1ME2 LINE L1 -5517 879 660 571 265 38 25 chr10 6203389 6203627 -139385661 - L1ME2 LINE L1 -6122 274 34 215 339 148 17 chr10 6203862 6204074 -139385214 - MIR3 SINE MIR -6 256 15 2014 114 0 14 chr10 6204225 6204522 -139384766 - AluSx SINE Alu -19 293 1 2099 114 0 7 chr10 6205889 6206188 -139383100 - AluSx SINE Alu -15 297 1 1581 146 8 0 chr10 6206194 6206447 -139382841 - AluSx SINE Alu -14 298 44 1015 146 0 12 chr10 6206447 6206611 -139382677 - AluJb SINE Alu -150 162 1 180 188 0 59 chr10 6206882 6206983 -139382305 + (CATA)n Simple_repeat Simple_repeat 4 98 0 188 289 103 21 chr10 6207044 6207141 -139382147 + L2 LINE L2 3209 3313 0 1975 127 3 19 chr10 6207926 6208241 -139381047 + AluSx SINE Alu 1 310 -2 287 292 144 26 chr10 6208332 6208490 -139380798 - MIR SINE MIR -50 212 43 183 302 16 0 chr10 6209691 6209754 -139379534 + L2 LINE L2 3250 3313 0 234 242 12 121 chr10 6210129 6210285 -139379003 + MIR3 SINE MIR 40 180 -28 210 143 0 0 chr10 6210598 6210633 -139378655 + (CA)n Simple_repeat Simple_repeat 1 35 0 2246 76 14 0 chr10 6210729 6211019 -139378269 + AluSq SINE Alu 1 294 -19 798 172 0 0 chr10 6212189 6212730 -139376558 + (TTGG)n Simple_repeat Simple_repeat 1 541 0 2088 115 0 7 chr10 6213685 6213989 -139375299 + AluSx SINE Alu 2 303 -9 2269 100 3 3 chr10 6214691 6214990 -139374298 + AluSq SINE Alu 3 301 -12 186 167 28 0 chr10 6215017 6215053 -139374235 + MER5B DNA MER1_type 88 124 -54 1127 173 138 27 chr10 6215057 6215113 -139374175 - L1MB5 LINE L1 0 6174 6126 1735 158 69 91 chr10 6215113 6215518 -139373770 - MSTD LTR MaLR 0 396 1 1127 173 138 27 chr10 6215518 6215721 -139373567 - L1MB5 LINE L1 -48 6126 5886 181 228 0 70 chr10 6215728 6215785 -139373503 + MER5B DNA MER1_type 122 174 -4 230 218 0 36 chr10 6215796 6215839 -139373449 - MER5A DNA MER1_type 0 189 147 840 127 0 8 chr10 6215839 6215973 -139373315 + L1MA5A LINE L1 6160 6292 -5 230 218 0 36 chr10 6215973 6215984 -139373304 - MER5A DNA MER1_type -42 147 137 775 201 13 0 chr10 6215984 6216143 -139373145 - MER5A DNA MER1_type -28 161 1 2203 124 0 0 chr10 6216182 6216481 -139372807 + AluSx SINE Alu 14 312 0 1728 197 64 33 chr10 6217332 6217443 -139371845 - MER63B DNA MER1_type -628 434 328 1578 185 49 3 chr10 6217443 6217729 -139371559 + AluJo SINE Alu 1 299 -13 1728 197 64 33 chr10 6217729 6218038 -139371250 - MER63B DNA MER1_type -734 328 1 1049 140 45 30 chr10 6218134 6218334 -139370954 - MER3 DNA MER1_type -6 203 1 1245 103 0 0 chr10 6218434 6218589 -139370699 + AluSg SINE Alu 1 155 -155 213 196 43 0 chr10 6219636 6219682 -139369606 + GA-rich Low_complexity Low_complexity 3 50 0 1883 154 7 0 chr10 6219721 6220013 -139369275 + AluJo SINE Alu 1 294 -18 671 225 40 12 chr10 6220052 6220225 -139369063 - MER5A DNA MER1_type -11 178 1 654 233 15 0 chr10 6220680 6220813 -139368475 + Charlie1 DNA MER1_type 57 191 -2570 350 175 6 129 chr10 6220811 6220955 -139368333 + Charlie1 DNA MER1_type 2573 2694 -67 * 2310 106 6 0 chr10 6220955 6221266 -139368022 - AluSq SINE Alu 0 313 1 350 175 6 129 chr10 6221266 6221292 -139367996 + Charlie1 DNA MER1_type 2694 2722 -39 2642 177 107 35 chr10 6221318 6221681 -139367607 + L1MB5 LINE L1 5366 5701 -463 2101 112 3 32 chr10 6221681 6221994 -139367294 + AluSx SINE Alu 1 304 -8 2642 177 107 35 chr10 6221994 6222356 -139366932 + L1MB5 LINE L1 5701 6163 -1 3263 191 20 30 chr10 6222760 6223140 -139366148 + L1MCa LINE L1 84 466 -5441 1319 162 199 39 chr10 6223140 6223528 -139365760 - LTR7 LTR ERV1 0 450 1 3263 191 20 30 chr10 6223528 6224227 -139365061 + L1MCa LINE L1 466 935 -4972 937 281 82 24 chr10 6224241 6224404 -139364884 + MLT1J LTR MaLR 1 153 -358 5234 120 24 31 chr10 6224404 6225282 -139364006 - MER4D LTR ERV1 0 872 1 937 281 82 24 chr10 6225282 6225535 -139363753 + MLT1J LTR MaLR 153 441 -70 4321 85 2 0 chr10 6225639 6226192 -139363096 - MER41A LTR ERV1 0 554 1 2000 175 34 11 chr10 6226192 6226565 -139362723 + MSTB1 LTR MaLR 10 394 -38 1185 82 19 0 chr10 6226566 6226724 -139362564 + AluSc SINE Alu 134 294 -15 219 69 0 0 chr10 6226724 6226753 -139362535 + (GA)n Simple_repeat Simple_repeat 1 29 0 1112 73 11 17 chr10 6226773 6226952 -139362336 + (GAAA)n Simple_repeat Simple_repeat 1 178 0 324 61 0 61 chr10 6226952 6227001 -139362287 + MSTB1 LTR MaLR 412 457 0 1897 171 14 26 chr10 6227571 6227692 -139361596 + MER7A DNA MER2_type 2 123 -2915 1985 133 7 0 chr10 6227692 6227995 -139361293 + AluSx SINE Alu 1 305 0 1897 171 14 26 chr10 6227995 6228223 -139361065 + MER7A DNA MER2_type 123 346 0 261 301 126 79 chr10 6228266 6228608 -139360680 - MLT1K LTR MaLR -97 491 134 780 228 95 30 chr10 6228610 6228679 -139360609 + L1MCa LINE L1 1650 1713 -4894 2151 135 3 0 chr10 6228679 6228976 -139360312 + AluSx SINE Alu 1 298 -14 780 228 95 30 chr10 6228976 6229169 -139360119 + L1MCa LINE L1 1713 1929 -4678 1069 202 50 60 chr10 6229186 6229413 -139359875 + MLT1C LTR MaLR 6 231 -236 1726 177 3 10 chr10 6229413 6229712 -139359576 - AluSx SINE Alu -15 297 1 1069 202 50 60 chr10 6229712 6229766 -139359522 + MLT1C LTR MaLR 231 284 -183 379 225 15 36 chr10 6229771 6229881 -139359407 + L1ME1 LINE L1 5894 6016 -148 * 421 232 62 9 chr10 6229879 6229991 -139359297 + L1MA10 LINE L1 6210 6327 -7 227 190 52 0 chr10 6229997 6230055 -139359233 + LTR33A LTR ERVL 459 519 -4 429 20 0 0 chr10 6230189 6230239 -139359049 + (CA)n Simple_repeat Simple_repeat 1 50 0 315 0 0 0 chr10 6230288 6230323 -139358965 + (CA)n Simple_repeat Simple_repeat 2 36 0 384 22 0 0 chr10 6230385 6230430 -139358858 + (CA)n Simple_repeat Simple_repeat 2 46 0 297 0 0 0 chr10 6230479 6230512 -139358776 + (CA)n Simple_repeat Simple_repeat 2 34 0 225 0 0 0 chr10 6230574 6230599 -139358689 + (CA)n Simple_repeat Simple_repeat 2 26 0 414 0 0 0 chr10 6230650 6230696 -139358592 + (CA)n Simple_repeat Simple_repeat 2 47 0 412 179 12 0 chr10 6232418 6232502 -139356786 - L1PA16 LINE L1 -2 6164 6080 2139 125 20 0 chr10 6232543 6232847 -139356441 + AluSx SINE Alu 1 310 -2 1666 176 42 3 chr10 6233093 6233377 -139355911 + AluSx SINE Alu 5 299 -13 2728 45 0 0 chr10 6233380 6233690 -139355598 + AluY SINE Alu 1 310 -1 312 204 66 109 chr10 6233938 6234026 -139355262 - LTR67 LTR ERVL -424 133 52 2451 63 17 0 chr10 6234026 6234328 -139354960 + AluY SINE Alu 1 307 -4 312 204 66 109 chr10 6234328 6234376 -139354912 - LTR67 LTR ERVL -505 52 3 35 71 0 0 chr10 6234411 6234481 -139354807 + AT_rich Low_complexity Low_complexity 1 70 0 198 0 0 0 chr10 6235953 6235975 -139353313 + (T)n Simple_repeat Simple_repeat 1 22 0 243 286 143 10 chr10 6236754 6236852 -139352436 - L2 LINE L2 0 3272 3162 2265 115 0 0 chr10 6240208 6240504 -139348784 + AluSx SINE Alu 1 296 -16 219 228 140 0 chr10 6240512 6240569 -139348719 - MIR SINE MIR -123 85 21 225 0 0 0 chr10 6240972 6240997 -139348291 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 351 286 31 0 chr10 6241027 6241125 -139348163 + MER3 DNA MER1_type 13 113 -96 254 245 64 21 chr10 6242409 6242503 -139346785 - MER5B DNA MER1_type 0 178 81 221 351 43 21 chr10 6242618 6242712 -139346576 + L3b LINE CR1 1478 1573 -10 191 323 104 0 chr10 6243611 6243707 -139345581 - MIR SINE MIR -49 213 108 2217 126 7 0 chr10 6244162 6244464 -139344824 + AluSx SINE Alu 1 304 -8 2042 133 7 3 chr10 6244466 6244760 -139344528 + AluSx SINE Alu 1 295 -17 1072 128 199 0 chr10 6246361 6246557 -139342731 - MER46A DNA MER2_type 0 236 2 1768 169 32 0 chr10 6248852 6249136 -139340152 + AluJb SINE Alu 1 293 -19 352 206 78 20 chr10 6250084 6250186 -139339102 + L1ME LINE L1 5709 5816 -305 360 284 97 92 chr10 6251045 6251349 -139337939 - L1MC4 LINE L1 -109 7933 7632 198 71 0 0 chr10 6251349 6251377 -139337911 + (CAT)n Simple_repeat Simple_repeat 1 28 0 360 284 97 92 chr10 6251377 6251710 -139337578 - L1MC4 LINE L1 -410 7632 7293 2209 102 30 0 chr10 6251873 6252168 -139337120 - AluSx SINE Alu -8 304 1 241 261 185 0 chr10 6252212 6252277 -139337011 - MER2 DNA MER2_type -1 344 268 1295 158 10 5 chr10 6252304 6252513 -139336775 - MER2 DNA MER2_type -135 210 1 2096 88 95 0 chr10 6253096 6253380 -139335908 + AluY SINE Alu 1 311 0 557 215 75 45 chr10 6253394 6253594 -139335694 - L1MC5 LINE L1 -44 7917 7712 276 165 198 44 chr10 6253600 6253691 -139335597 - MER106B DNA MER1_type -5 1054 950 324 222 0 14 chr10 6253704 6253776 -139335512 - MER106A DNA MER1_type -164 72 2 1856 82 106 0 chr10 6254243 6254528 -139334760 - AluY SINE Alu 0 312 1 2139 118 7 3 chr10 6256431 6256735 -139332553 + AluSx SINE Alu 1 305 -7 285 278 0 14 chr10 6257363 6257435 -139331853 + AluY SINE Alu 214 284 -17 2170 123 7 10 chr10 6257652 6257962 -139331326 - AluSx SINE Alu -1 311 3 1783 175 3 0 chr10 6258068 6258360 -139330928 + AluJb SINE Alu 6 298 -14 712 205 56 0 chr10 6259151 6259312 -139329976 - MIR SINE MIR -4 258 89 1652 181 0 7 chr10 6259399 6259675 -139329613 + AluJo SINE Alu 1 274 -38 1460 103 0 10 chr10 6260057 6260252 -139329036 + AluSx SINE Alu 1 193 -119 2101 135 0 0 chr10 6261110 6261414 -139327874 + AluJb SINE Alu 1 304 -8 1569 198 54 50 chr10 6261933 6262023 -139327265 + MLT1C LTR MaLR 1 89 -378 2229 107 3 3 chr10 6262023 6262331 -139326957 - AluSg SINE Alu -2 308 1 1569 198 54 50 chr10 6262331 6262705 -139326583 + MLT1C LTR MaLR 89 467 0 2049 211 67 19 chr10 6262781 6263301 -139325987 + L1MD2 LINE L1 5813 6357 -2 3229 149 19 21 chr10 6263973 6264527 -139324761 - Tigger4(Zombi) DNA MER2_type 0 2731 2177 1988 150 0 16 chr10 6264527 6264841 -139324447 + AluJb SINE Alu 1 309 -3 4728 129 25 16 chr10 6265211 6265960 -139323328 - Tigger4(Zombi) DNA MER2_type -769 1962 1207 779 201 7 0 chr10 6265960 6266099 -139323189 + AluJo SINE Alu 24 163 -149 830 87 0 0 chr10 6266103 6266206 -139323082 - FLAM_C SINE Alu -40 103 1 2274 155 27 12 chr10 6266207 6266613 -139322675 - Tigger4(Zombi) DNA MER2_type -2319 412 1 2394 97 0 0 chr10 6266633 6266933 -139322355 - AluSx SINE Alu -12 300 1 21 57 0 0 chr10 6267307 6267342 -139321946 + AT_rich Low_complexity Low_complexity 1 35 0 414 276 34 63 chr10 6267345 6267584 -139321704 + L1ME LINE L1 5496 5727 -394 2162 121 3 10 chr10 6267926 6268239 -139321049 - AluSx SINE Alu -1 311 1 507 126 53 0 chr10 6268244 6268339 -139320949 - L1PA13 LINE L1 0 6163 6064 23 33 0 0 chr10 6268701 6268731 -139320557 + GC_rich Low_complexity Low_complexity 1 30 0 22 0 0 0 chr10 6269364 6269386 -139319902 + GC_rich Low_complexity Low_complexity 1 22 0 2213 101 3 29 chr10 6270934 6271250 -139318038 - AluSg SINE Alu -2 308 1 603 218 12 42 chr10 6271257 6271275 -139318013 - L1MA10 LINE L1 0 6334 6317 1833 229 62 29 chr10 6271275 6271822 -139317466 - L1ME1 LINE L1 -6 6160 5596 520 206 0 11 chr10 6271822 6271914 -139317374 - AluJb SINE Alu -17 295 205 33 0 0 0 chr10 6271916 6271949 -139317339 + AT_rich Low_complexity Low_complexity 1 33 0 2328 116 0 0 chr10 6271949 6272260 -139317028 - AluSx SINE Alu -1 311 1 1144 217 56 11 chr10 6272266 6272552 -139316736 - L1ME1 LINE L1 -565 5601 5303 2022 112 0 0 chr10 6272563 6272830 -139316458 + AluSx SINE Alu 9 275 -37 1934 194 35 28 chr10 6272869 6273351 -139315937 - L1ME1 LINE L1 -849 5297 4832 841 225 34 41 chr10 6273352 6273619 -139315669 + L1M4 LINE L1 4290 4554 -1592 355 67 0 0 chr10 6274421 6274500 -139314788 + Alu SINE Alu 241 319 0 221 344 65 42 chr10 6274627 6274842 -139314446 - L2 LINE L2 -551 2763 2544 197 264 99 22 chr10 6275196 6275287 -139314001 + L2 LINE L2 3154 3251 -21 1490 156 13 0 chr10 6275851 6276166 -139313122 + AluJo SINE Alu 55 372 0 377 248 9 9 chr10 6276347 6276460 -139312828 + L1MEd LINE L1 89 201 -6004 1136 199 44 17 chr10 6276460 6276757 -139312531 + L1MEd LINE L1 1849 2153 -4243 * 1354 234 37 23 chr10 6276756 6277188 -139312100 + L1M4 LINE L1 4214 4651 -1495 1684 154 50 18 chr10 6277191 6277471 -139311817 + AluJo SINE Alu 1 289 -23 308 56 33 89 chr10 6277471 6277561 -139311727 + (TTTAA)n Simple_repeat Simple_repeat 1 85 0 479 268 43 39 chr10 6277572 6277826 -139311462 + L1M4 LINE L1 4586 4840 -1306 708 287 87 53 chr10 6277841 6278347 -139310941 + L1MCc LINE L1 716 1238 -5185 2142 115 3 3 chr10 6278782 6279078 -139310210 - AluSx SINE Alu -16 296 1 183 265 157 20 chr10 6279156 6279258 -139310030 + L2 LINE L2 3155 3270 -2 2325 95 0 0 chr10 6279352 6279637 -139309651 + AluSc SINE Alu 1 285 -24 387 60 0 0 chr10 6279639 6279689 -139309599 + (CAAGG)n Simple_repeat Simple_repeat 2 51 0 778 93 0 0 chr10 6279807 6279904 -139309384 + AluS SINE Alu 2 98 -214 1418 80 0 6 chr10 6279905 6280080 -139309208 - AluSq SINE Alu -53 260 87 2406 95 0 0 chr10 6280834 6281138 -139308150 + AluSx SINE Alu 1 304 -8 288 326 30 30 chr10 6281177 6281309 -139307979 + MIR SINE MIR 20 151 -111 1944 143 0 29 chr10 6282387 6282695 -139306593 + AluJo SINE Alu 1 299 -13 1311 262 91 12 chr10 6283386 6283814 -139305474 - LTR40b LTR ERVL 0 462 1 2304 117 0 0 chr10 6284245 6284545 -139304743 - AluSx SINE Alu -12 300 1 1712 153 0 67 chr10 6285439 6285640 -139303648 - AluJo SINE Alu -19 293 119 2272 119 0 3 chr10 6285640 6285943 -139303345 + AluSx SINE Alu 1 302 -10 1712 153 0 67 chr10 6285943 6286055 -139303233 - AluJo SINE Alu -193 119 1 907 119 8 15 chr10 6287550 6287684 -139301604 + FLAM_C SINE Alu 1 133 0 248 239 0 45 chr10 6287850 6287917 -139301371 + G-rich Low_complexity Low_complexity 4 67 0 1890 171 0 3 chr10 6288168 6288472 -139300816 + AluSx SINE Alu 1 303 -9 512 275 108 12 chr10 6288607 6288847 -139300441 - L1MC4a LINE L1 -1910 5898 5636 2200 126 3 0 chr10 6288963 6289272 -139300016 + AluSx SINE Alu 1 310 -2 2281 125 0 0 chr10 6289281 6289584 -139299704 + AluSg SINE Alu 1 303 -7 2312 109 0 31 chr10 6289594 6289915 -139299373 + AluSx SINE Alu 1 311 -1 2434 96 0 0 chr10 6290540 6290841 -139298447 + AluSx SINE Alu 1 301 -11 2284 101 3 0 chr10 6291456 6291753 -139297535 + AluSp SINE Alu 1 298 -15 842 152 0 45 chr10 6292261 6292393 -139296895 + FLAM_C SINE Alu 1 126 -17 831 157 64 7 chr10 6292450 6292590 -139296698 + AluSq/x SINE Alu 1 148 -165 544 138 0 0 chr10 6292598 6292692 -139296596 + AluJ/FRAM SINE Alu 216 309 -3 677 189 0 0 chr10 6293327 6293433 -139295855 - FLAM_C SINE Alu -36 107 2 363 259 54 45 chr10 6294772 6294884 -139294404 - MIR3 SINE MIR -43 165 53 886 150 0 0 chr10 6294897 6295022 -139294266 + AluJo SINE Alu 3 130 -182 1960 149 17 7 chr10 6295022 6295311 -139293977 - AluSx SINE Alu -20 292 1 903 145 45 73 chr10 6295513 6295683 -139293605 - AluSg/x SINE Alu -18 294 128 2269 104 0 16 chr10 6295683 6295999 -139293289 - AluY SINE Alu 0 311 1 411 243 27 70 chr10 6296061 6296246 -139293042 - MLT1H LTR MaLR -266 283 107 193 245 20 20 chr10 6296334 6296383 -139292905 + L2 LINE L2 3262 3310 -3 535 144 72 0 chr10 6296481 6296578 -139292710 + L1PA16 LINE L1 6058 6161 -5 2283 104 3 0 chr10 6296750 6297039 -139292249 - AluSx SINE Alu -21 291 2 26 30 0 0 chr10 6297931 6297964 -139291324 + AT_rich Low_complexity Low_complexity 1 33 0 2295 107 0 0 chr10 6297987 6298285 -139291003 + AluSx SINE Alu 1 298 -14 1895 138 24 3 chr10 6299175 6299464 -139289824 + AluJb SINE Alu 1 295 -17 2330 102 0 0 chr10 6300026 6300319 -139288969 - AluSx SINE Alu -19 293 1 866 163 12 25 chr10 6301279 6301439 -139287849 + FRAM SINE Alu 2 159 -17 351 357 85 5 chr10 6301832 6302056 -139287232 + MIR SINE MIR 12 253 -9 386 238 69 10 chr10 6302226 6302327 -139286961 + MLT1L LTR MaLR 170 276 -339 1039 275 67 73 chr10 6302334 6303003 -139286285 - PABL_B LTR ERV1 -2 665 1 2441 109 0 0 chr10 6303620 6303932 -139285356 + AluSx SINE Alu 1 312 0 1739 158 4 7 chr10 6305291 6305564 -139283724 + AluJo SINE Alu 26 297 -15 275 246 115 71 chr10 6305841 6306093 -139283195 - HAL1 LINE L1 0 2507 2245 1709 134 19 11 chr10 6306274 6306542 -139282746 - AluJo SINE Alu -42 270 1 388 270 44 73 chr10 6306544 6306650 -139282638 - HAL1 LINE L1 -1120 1387 1288 2343 87 0 0 chr10 6306650 6306939 -139282349 + AluY SINE Alu 1 289 -22 388 270 44 73 chr10 6306939 6307036 -139282252 - HAL1 LINE L1 -1219 1288 1190 232 167 0 0 chr10 6307036 6307084 -139282204 - Alu SINE Alu 0 302 255 2273 97 0 0 chr10 6307220 6307509 -139281779 + AluY SINE Alu 1 289 -22 391 249 118 70 chr10 6307535 6307600 -139281688 - HAL1 LINE L1 -1246 1261 1201 1920 144 37 3 chr10 6307600 6307899 -139281389 - AluSx SINE Alu -3 309 1 391 249 118 70 chr10 6307899 6308037 -139281251 - HAL1 LINE L1 -1306 1201 1071 1649 93 19 5 chr10 6308037 6308252 -139281036 - AluSx SINE Alu -94 218 1 391 249 118 70 chr10 6308252 6308445 -139280843 - HAL1 LINE L1 -1436 1071 845 222 37 0 0 chr10 6308502 6308529 -139280759 + (CA)n Simple_repeat Simple_repeat 2 28 0 205 291 204 67 chr10 6308637 6309206 -139280082 + L2 LINE L2 1866 2546 -768 883 216 22 0 chr10 6309206 6309391 -139279897 - MER5A DNA MER1_type 0 189 1 205 291 204 67 chr10 6309391 6309508 -139279780 + L2 LINE L2 2546 2646 -668 626 168 62 62 chr10 6309514 6309675 -139279613 - AluJb SINE Alu -18 294 134 28 48 0 0 chr10 6309867 6309909 -139279379 + AT_rich Low_complexity Low_complexity 1 42 0 23 0 0 0 chr10 6311175 6311198 -139278090 + AT_rich Low_complexity Low_complexity 1 23 0 317 342 90 0 chr10 6311390 6311545 -139277743 + MIR SINE MIR 75 243 -19 311 283 91 0 chr10 6312121 6312220 -139277068 - L1ME LINE L1 -343 5778 5671 256 248 62 69 chr10 6312282 6312427 -139276861 + MER112 DNA MER1_type 66 209 -51 21 0 0 0 chr10 6312428 6312449 -139276839 + AT_rich Low_complexity Low_complexity 1 21 0 1510 151 120 8 chr10 6312456 6312714 -139276574 + AluSg1 SINE Alu 14 300 -9 2193 115 3 16 chr10 6312747 6313060 -139276228 + AluSx SINE Alu 1 309 -3 2018 142 0 29 chr10 6313473 6313782 -139275506 + AluSx SINE Alu 1 300 -12 2304 120 0 0 chr10 6314018 6314319 -139274969 - AluSx SINE Alu -11 301 1 792 254 65 65 chr10 6314324 6314408 -139274880 + L1MC4a LINE L1 5520 5603 -2205 1819 156 7 3 chr10 6314408 6314712 -139274576 + AluJb SINE Alu 1 305 0 792 254 65 65 chr10 6314712 6314965 -139274323 + L1MC4a LINE L1 5602 5858 -1950 312 291 156 33 chr10 6315033 6315261 -139274027 + L1MC4a LINE L1 5848 6047 -1761 1955 160 0 10 chr10 6315261 6315561 -139273727 - AluSx SINE Alu -13 299 3 312 291 156 33 chr10 6315561 6315754 -139273534 + L1MC4a LINE L1 6047 6321 -1487 1586 143 10 68 chr10 6316378 6316672 -139272616 + AluJb SINE Alu 17 293 -19 240 238 130 77 chr10 6316887 6317148 -139272140 + L1MC5 LINE L1 7303 7577 -384 915 262 23 0 chr10 6317657 6317871 -139271417 + MER58A DNA MER1_type 1 219 -5 428 289 78 8 chr10 6318206 6318334 -139270954 + L2 LINE L2 3161 3297 -16 2038 146 3 0 chr10 6318985 6319279 -139270009 + AluJo SINE Alu 11 305 -7 2378 108 0 3 chr10 6319328 6319635 -139269653 - AluSx SINE Alu -6 306 1 265 293 75 45 chr10 6320315 6320448 -139268840 - MIR3 SINE MIR -71 137 1 308 217 0 0 chr10 6320614 6320674 -139268614 + L1MB8 LINE L1 6101 6160 -18 2266 109 23 0 chr10 6321011 6321314 -139267974 + AluSx SINE Alu 1 310 -2 815 131 0 16 chr10 6321362 6321484 -139267804 + FLAM_C SINE Alu 9 128 -15 239 198 136 37 chr10 6322340 6322421 -139266867 - MIR SINE MIR -66 142 54 2169 115 10 0 chr10 6322559 6322855 -139266433 + AluSq SINE Alu 1 299 -14 396 280 10 0 chr10 6323189 6323289 -139265999 + MIR3 SINE MIR 8 108 -100 203 56 56 0 chr10 6323827 6323863 -139265425 + T-rich Low_complexity Low_complexity 3 40 0 2157 126 3 0 chr10 6324242 6324535 -139264753 + AluSx SINE Alu 1 294 -18 198 257 157 14 chr10 6325234 6325304 -139263984 + L2 LINE L2 3193 3272 0 366 271 90 23 chr10 6325359 6325532 -139263756 - MIR3 SINE MIR -64 144 6 3638 173 57 16 chr10 6326822 6327591 -139261697 + L1MC3 LINE L1 6967 7767 -18 1455 224 69 16 chr10 6327778 6327930 -139261358 - Charlie1 DNA MER1_type 0 2761 2619 2264 120 0 0 chr10 6327930 6328221 -139261067 - AluSx SINE Alu -21 291 1 1455 224 69 16 chr10 6328221 6328500 -139260788 - Charlie1 DNA MER1_type -142 2619 2307 646 263 72 0 chr10 6328503 6328697 -139260591 - Charlie1 DNA MER1_type -767 1994 1787 423 284 216 21 chr10 6332386 6332580 -139256708 + MIR SINE MIR 31 262 0 260 295 82 16 chr10 6333379 6333501 -139255787 + L1MB7 LINE L1 6046 6175 -9 366 250 117 51 chr10 6334565 6334761 -139254527 + MLT1A2 LTR MaLR 1 209 -156 1976 131 10 13 chr10 6335046 6335344 -139253944 - AluSx SINE Alu -15 297 1 326 356 108 16 chr10 6335412 6335718 -139253570 + L2 LINE L2 2862 3195 -118 2248 119 0 0 chr10 6337129 6337424 -139251864 - AluSx SINE Alu -17 295 1 262 287 41 49 chr10 6337648 6337770 -139251518 + MIR3 SINE MIR 1 121 -87 * 575 330 58 5 chr10 6337768 6337956 -139251332 + L3 LINE CR1 1379 1576 -1 1929 97 0 34 chr10 6338561 6338829 -139250459 + AluSx SINE Alu 49 307 -5 260 293 104 47 chr10 6338937 6339043 -139250245 + MIR SINE MIR 34 145 -63 2431 215 11 70 chr10 6339082 6339652 -139249636 + L1M4 LINE L1 2319 2835 -3311 2126 151 0 0 chr10 6339652 6339951 -139249337 + AluSx SINE Alu 3 301 -11 2431 215 11 70 chr10 6339951 6340134 -139249154 + L1M4 LINE L1 2835 3027 -3119 180 0 0 0 chr10 6340134 6340154 -139249134 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2218 109 3 10 chr10 6340159 6340461 -139248827 + AluSx SINE Alu 1 300 -12 2058 126 3 7 chr10 6341863 6342189 -139247099 - AluSx SINE Alu 0 312 1 24 0 0 0 chr10 6342221 6342245 -139247043 + AT_rich Low_complexity Low_complexity 1 24 0 27 49 0 0 chr10 6342553 6342594 -139246694 + AT_rich Low_complexity Low_complexity 1 41 0 31 0 0 0 chr10 6342696 6342727 -139246561 + AT_rich Low_complexity Low_complexity 1 31 0 750 148 0 41 chr10 6342727 6342849 -139246439 - FLAM_C SINE Alu -25 118 2 1632 141 87 7 chr10 6343091 6343368 -139245920 + AluJo SINE Alu 1 299 -13 2351 77 7 0 chr10 6343795 6344092 -139245196 + AluSp SINE Alu 1 299 -14 327 125 0 0 chr10 6344695 6344751 -139244537 + Alu SINE Alu 1 56 -247 1164 138 0 0 chr10 6344771 6344930 -139244358 + AluSg/x SINE Alu 115 273 -39 23 97 0 0 chr10 6345034 6345106 -139244182 + AT_rich Low_complexity Low_complexity 1 72 0 218 337 36 12 chr10 6345277 6345360 -139243928 - L3b LINE CR1 -95 1488 1404 2225 129 13 0 chr10 6345560 6345869 -139243419 + AluSq SINE Alu 1 313 0 2093 98 56 3 chr10 6345966 6346251 -139243037 + AluSq SINE Alu 1 300 -13 2227 142 0 0 chr10 6346299 6346609 -139242679 - AluSx SINE Alu -2 310 1 313 71 0 0 chr10 6347064 6347106 -139242182 + 5S rRNA rRNA 1 42 -79 257 0 30 0 chr10 6348090 6348123 -139241165 + (CAAAA)n Simple_repeat Simple_repeat 2 35 0 1889 176 22 35 chr10 6348628 6348714 -139240574 + MLT1A1 LTR MaLR 1 87 -278 2183 131 3 0 chr10 6348714 6349012 -139240276 + AluSx SINE Alu 1 299 -13 1889 176 22 35 chr10 6349012 6349295 -139239993 + MLT1A1 LTR MaLR 87 365 0 180 218 195 46 chr10 6350690 6350777 -139238511 - MER5B DNA MER1_type -1 177 78 429 304 22 5 chr10 6351489 6351756 -139237532 + MLT1J1 LTR MaLR 37 336 -110 269 253 43 10 chr10 6351773 6351894 -139237394 + MLT1J1 LTR MaLR 325 441 -5 22 0 0 0 chr10 6352044 6352066 -139237222 + AT_rich Low_complexity Low_complexity 1 22 0 420 265 96 42 chr10 6352829 6353008 -139236280 - MIR3 SINE MIR -51 211 3 194 0 39 0 chr10 6354087 6354113 -139235175 + (TTTG)n Simple_repeat Simple_repeat 2 28 0 1930 130 3 18 chr10 6354115 6354400 -139234888 - AluSx SINE Alu -31 281 1 2244 83 3 10 chr10 6355512 6355800 -139233488 + AluSx SINE Alu 1 286 -26 198 296 111 68 chr10 6356300 6356462 -139232826 + MIR SINE MIR 74 242 -20 232 221 14 64 chr10 6356856 6356996 -139232292 + C-rich Low_complexity Low_complexity 2 134 0 32 0 0 0 chr10 6357104 6357136 -139232152 + GC_rich Low_complexity Low_complexity 1 32 0 227 182 26 52 chr10 6358006 6358083 -139231205 + (CCCGG)n Simple_repeat Simple_repeat 1 75 0 25 31 0 0 chr10 6358148 6358180 -139231108 + GC_rich Low_complexity Low_complexity 1 32 0 289 237 166 22 chr10 6358755 6358894 -139230394 - L1MD2 LINE L1 -148 6211 6053 2211 81 0 39 chr10 6359741 6360048 -139229240 + AluSq SINE Alu 4 298 -15 442 261 62 41 chr10 6360173 6360368 -139228920 + MIR SINE MIR 61 259 -3 2221 116 0 0 chr10 6360810 6361103 -139228185 - AluSx SINE Alu -8 304 12 363 302 116 32 chr10 6361696 6361885 -139227403 + L1 LINE L1 5191 5395 -751 471 346 77 58 chr10 6361914 6361947 -139227341 - L2 LINE L2 -5 3267 3236 2460 69 0 7 chr10 6361947 6362252 -139227036 + AluY SINE Alu 7 309 -2 471 346 77 58 chr10 6362252 6362646 -139226642 - L2 LINE L2 -36 3236 2832 2361 111 0 9 chr10 6362658 6362974 -139226314 - AluSq SINE Alu 0 313 1 334 376 16 11 chr10 6362980 6363166 -139226122 - L2 LINE L2 -766 2548 2362 411 307 102 28 chr10 6363511 6363726 -139225562 + MIR SINE MIR 16 246 -16 1861 142 69 0 chr10 6363828 6364103 -139225185 + AluSx SINE Alu 1 294 -18 227 83 0 42 chr10 6364919 6364967 -139224321 + (TTTTTG)n Simple_repeat Simple_repeat 3 48 0 1326 98 0 0 chr10 6364997 6365161 -139224127 - AluSg SINE Alu -146 164 1 39 0 0 37 chr10 6365336 6365352 -139223936 + AT_rich Low_complexity Low_complexity 1 16 -36 2050 96 0 41 chr10 6365352 6365436 -139223852 + AluSc SINE Alu 1 87 -222 2449 71 7 0 chr10 6365436 6365733 -139223555 + AluY SINE Alu 1 299 -12 2050 96 0 41 chr10 6365733 6365941 -139223347 + AluSc SINE Alu 87 281 -28 390 21 0 0 chr10 6365941 6365988 -139223300 + (TA)n Simple_repeat Simple_repeat 2 48 0 39 0 0 37 chr10 6365988 6366024 -139223264 + AT_rich Low_complexity Low_complexity 14 52 0 975 135 0 0 chr10 6366324 6366457 -139222831 + FLAM_C SINE Alu 1 133 0 2976 88 65 18 chr10 6366550 6366994 -139222294 + MER4C LTR ERV1 1 465 0 2115 119 3 49 chr10 6367219 6367546 -139221742 - AluSx SINE Alu 0 312 1 2256 103 20 0 chr10 6367939 6368231 -139221057 - AluSx SINE Alu -14 298 1 1553 115 51 0 chr10 6368611 6368845 -139220443 - AluSg SINE Alu -4 306 61 210 179 21 53 chr10 6369016 6369111 -139220177 + (TTTG)n Simple_repeat Simple_repeat 3 94 0 1782 127 6 47 chr10 6369394 6369716 -139219572 - AluSx SINE Alu -3 309 1 2112 99 20 0 chr10 6370128 6370420 -139218868 - AluSx SINE Alu -14 298 1 2026 109 41 0 chr10 6370801 6371094 -139218194 - AluSg SINE Alu -5 305 1 2058 134 0 0 chr10 6372199 6372505 -139216783 + AluSx SINE Alu 1 306 -6 222 161 36 36 chr10 6372704 6372760 -139216528 + T-rich Low_complexity Low_complexity 3 58 0 2163 85 0 0 chr10 6373428 6373729 -139215559 + AluSx SINE Alu 1 301 0 1265 111 0 0 chr10 6373729 6373901 -139215387 + AluSg/x SINE Alu 129 300 -10 681 280 14 14 chr10 6374031 6374242 -139215046 + L2 LINE L2 2999 3209 -104 24 0 0 0 chr10 6374256 6374280 -139215008 + AT_rich Low_complexity Low_complexity 1 24 0 259 258 15 0 chr10 6374314 6374380 -139214908 - MIR SINE MIR -17 245 179 2073 105 7 0 chr10 6375425 6375711 -139213577 + AluSc SINE Alu 3 290 -19 308 184 53 13 chr10 6376032 6376108 -139213180 - L1ME4a LINE L1 -45 6076 5998 1925 121 3 48 chr10 6376138 6376283 -139213005 + AluSx SINE Alu 1 126 -186 2151 100 0 3 chr10 6376283 6376583 -139212705 + AluY SINE Alu 2 300 -11 1925 121 3 48 chr10 6376583 6376751 -139212537 + AluSx SINE Alu 126 300 -12 2312 73 0 0 chr10 6376756 6377045 -139212243 + AluY SINE Alu 1 289 -22 1992 130 7 0 chr10 6377114 6377415 -139211873 - AluSx SINE Alu -9 303 1 182 235 82 71 chr10 6377552 6377650 -139211638 - L2 LINE L2 -1313 2001 1903 2113 85 3 0 chr10 6378184 6378507 -139210781 - AluSp SINE Alu 0 324 1 1724 129 71 4 chr10 6378927 6379207 -139210081 + AluJo SINE Alu 1 299 -13 212 236 145 21 chr10 6379361 6379531 -139209757 - L2 LINE L2 -1438 1876 1638 755 106 89 0 chr10 6379672 6379795 -139209493 + L1PA16 LINE L1 6024 6157 -9 541 259 73 0 chr10 6379943 6380148 -139209140 - L2 LINE L2 -1794 1520 1301 249 254 56 0 chr10 6380189 6380260 -139209028 - MER5A DNA MER1_type -53 136 62 686 233 14 0 chr10 6380274 6380420 -139208868 - L1MA10 LINE L1 -1 6333 6186 1273 94 124 0 chr10 6380422 6380624 -139208664 + MER30 DNA MER1_type 4 230 0 1338 132 14 7 chr10 6380658 6380864 -139208424 - LTR12 LTR ERV1 -133 581 276 357 204 45 68 chr10 6380864 6380996 -139208292 - LTR30 LTR ERV1 -71 723 552 289 93 0 0 chr10 6380996 6381039 -139208249 - pTR5 LTR ERV1 -433 2005 1963 * 1031 77 8 0 chr10 6381022 6381152 -139208136 - LTR12 LTR ERV1 -531 183 53 250 269 0 0 chr10 6381152 6381204 -139208084 - LTR30 LTR ERV1 -670 52 1 5642 92 8 12 chr10 6381209 6381982 -139207306 - HERV9 LTR ERV1 -4 8395 7626 2063 124 77 95 chr10 6381980 6382902 -139206386 - HERV17 LTR ERV1 -5156 1740 703 * 6308 91 8 11 chr10 6382903 6383771 -139205517 - HERV17 LTR ERV1 -3455 4944 4080 541 82 61 10 chr10 6383778 6383876 -139205412 - HERV17 LTR ERV1 -5260 3139 3037 1724 153 12 41 chr10 6384009 6384080 -139205208 + MER46B DNA MER2_type 30 102 -2629 2299 84 0 13 chr10 6384080 6384389 -139204899 + AluY SINE Alu 1 305 -6 1724 153 12 41 chr10 6384389 6384657 -139204631 + MER46B DNA MER2_type 102 234 -2 1920 120 10 19 chr10 6384839 6385147 -139204141 + AluSx SINE Alu 1 305 -7 349 252 61 46 chr10 6386578 6386709 -139202579 + L2 LINE L2 3181 3313 0 368 191 95 87 chr10 6386985 6386999 -139202289 + L1MC4 LINE L1 1978 1990 -6332 1983 130 3 0 chr10 6386999 6387292 -139201996 + AluSx SINE Alu 1 294 -18 368 191 95 87 chr10 6387292 6387403 -139201885 + L1MC4 LINE L1 1990 6982 -1340 180 176 0 0 chr10 6388892 6388926 -139200362 + GA-rich Low_complexity Low_complexity 2 35 0 218 183 134 12 chr10 6389335 6389417 -139199871 + SUBTEL_sa Satellite Satellite 11 102 -72 285 167 0 0 chr10 6390127 6390181 -139199107 + (CA)n Simple_repeat Simple_repeat 1 54 0 520 253 66 62 chr10 6390394 6390651 -139198637 + L1 LINE L1 2266 2523 -3623 706 302 120 40 chr10 6390732 6391232 -139198056 + L1 LINE L1 2632 3171 -2975 2331 63 0 0 chr10 6392180 6392467 -139196821 - AluSq SINE Alu -9 304 18 947 97 14 0 chr10 6392500 6392644 -139196644 + (TTTC)n Simple_repeat Simple_repeat 1 146 0 2025 114 0 0 chr10 6392644 6392925 -139196363 - AluSq SINE Alu -32 281 1 23 0 0 0 chr10 6393110 6393133 -139196155 + AT_rich Low_complexity Low_complexity 1 23 0 2099 121 7 0 chr10 6393278 6393584 -139195704 + AluSx SINE Alu 1 308 -4 1728 153 0 7 chr10 6393824 6394099 -139195189 - AluJb SINE Alu -26 286 14 430 305 67 22 chr10 6394592 6394815 -139194473 - MIR SINE MIR -28 234 2 324 339 26 0 chr10 6394949 6395064 -139194224 - MIR SINE MIR -12 250 133 467 240 71 19 chr10 6396382 6396536 -139192752 + HERV16 LTR ERVL 153 314 -4682 908 124 7 0 chr10 6396540 6396677 -139192611 + AluSg/x SINE Alu 158 295 -17 499 326 127 17 chr10 6396715 6397034 -139192254 - HERVL LTR ERVL -2096 2900 2617 1916 118 14 0 chr10 6397034 6397342 -139191946 + AluSp SINE Alu 1 312 0 499 326 127 17 chr10 6397342 6397537 -139191751 - HERVL LTR ERVL -2379 2617 2323 1262 265 7 0 chr10 6397554 6397841 -139191447 + MER58B DNA MER1_type 15 303 -38 677 298 121 46 chr10 6397852 6397918 -139191370 - HERVL LTR ERVL -2668 2328 2268 2119 115 3 0 chr10 6397918 6398223 -139191065 - AluSx SINE Alu -6 306 1 677 298 121 46 chr10 6398223 6398502 -139190786 - HERVL LTR ERVL -2728 2268 1957 207 0 0 0 chr10 6398593 6398616 -139190672 + (TTA)n Simple_repeat Simple_repeat 2 24 0 2097 111 0 0 chr10 6398618 6398898 -139190390 - AluSx SINE Alu -32 280 1 358 164 41 82 chr10 6399379 6399525 -139189763 + (GAGTG)n Simple_repeat Simple_repeat 4 143 0 225 0 0 0 chr10 6399709 6399734 -139189554 + (A)n Simple_repeat Simple_repeat 1 25 0 276 198 23 93 chr10 6399738 6399824 -139189464 - L1ME3A LINE L1 -123 6047 5968 1578 252 67 40 chr10 6399892 6400654 -139188634 - L1ME3A LINE L1 -214 5956 5172 1524 105 5 5 chr10 6400651 6400870 -139188418 + L1PA14 LINE L1 5820 6038 -123 * 1055 96 0 0 chr10 6400873 6401009 -139188279 + AluSq/x SINE Alu 1 136 -176 2116 124 0 6 chr10 6401009 6401323 -139187965 + AluSx SINE Alu 1 312 0 796 123 22 0 chr10 6401325 6401463 -139187825 + L1PA14 LINE L1 6020 6160 -1 2350 62 7 3 chr10 6401469 6401776 -139187512 + AluY SINE Alu 1 308 -3 367 304 0 0 chr10 6401788 6401900 -139187388 - L1ME3A LINE L1 -988 5158 5047 795 253 136 8 chr10 6401902 6402247 -139187041 - LTR50 LTR ERVL 0 795 326 3774 92 0 25 chr10 6402260 6402784 -139186504 - MER9 LTR ERVK 0 511 1 576 251 111 6 chr10 6402809 6402980 -139186308 - LTR50 LTR ERVL -598 197 9 1854 162 3 0 chr10 6402986 6403282 -139186006 - AluSx SINE Alu -15 297 1 1115 277 112 15 chr10 6403285 6403892 -139185396 - L1ME3A LINE L1 -1097 5049 4384 * 3781 249 66 60 chr10 6403879 6404365 -139184923 - L1MC4 LINE L1 0 8042 7561 2344 85 0 0 chr10 6404365 6404672 -139184616 - AluSx SINE Alu 0 312 6 3781 249 66 60 chr10 6404672 6405185 -139184103 - L1MC4 LINE L1 -481 7561 7053 1652 153 10 35 chr10 6405185 6405499 -139183789 - AluJo SINE Alu 0 312 7 3781 249 66 60 chr10 6405499 6406001 -139183287 - L1MC4 LINE L1 -989 7053 6527 564 257 39 45 chr10 6406001 6406180 -139183108 - MER45A DNA AcHobo 0 178 1 3781 249 66 60 chr10 6406180 6406216 -139183072 - L1MC4 LINE L1 -1515 6527 6493 2789 209 80 15 chr10 6406266 6406920 -139182368 - MER45B DNA AcHobo -68 972 277 488 213 37 81 chr10 6406931 6406969 -139182319 - MER45B DNA AcHobo -895 145 107 2501 59 0 0 chr10 6406969 6407274 -139182014 + AluSx SINE Alu 1 305 -7 488 213 37 81 chr10 6407274 6407371 -139181917 - MER45B DNA AcHobo -933 107 16 34 0 0 22 chr10 6407647 6407666 -139181622 + AT_rich Low_complexity Low_complexity 1 19 -25 1759 123 90 0 chr10 6407666 6407943 -139181345 + AluSg SINE Alu 1 302 -8 34 0 0 22 chr10 6407943 6407968 -139181320 + AT_rich Low_complexity Low_complexity 19 44 0 1897 154 0 7 chr10 6408036 6408342 -139180946 + AluJb SINE Alu 1 304 -8 301 213 0 16 chr10 6408350 6408411 -139180877 - L1ME3A LINE L1 -1771 4375 4316 624 188 107 0 chr10 6408641 6408753 -139180535 - FLAM_A SINE Alu -8 125 2 2133 92 0 7 chr10 6409146 6409474 -139179814 + AluSq SINE Alu 2 327 0 444 309 116 77 chr10 6409647 6410237 -139179051 + L2 LINE L2 2670 3271 -1 222 319 14 14 chr10 6410855 6410927 -139178361 + MIR SINE MIR 36 107 -155 303 404 7 7 chr10 6411246 6411382 -139177906 - L2 LINE L2 -4 3268 3133 2267 80 3 7 chr10 6411708 6412010 -139177278 + AluSx SINE Alu 1 301 -11 1387 114 0 10 chr10 6412299 6412501 -139176787 - AluSg/x SINE Alu -8 304 105 1686 194 14 81 chr10 6412865 6413221 -139176067 + MLT1B LTR MaLR 1 326 -64 1632 171 24 0 chr10 6413221 6413519 -139175769 + AluJo SINE Alu 1 305 -7 1686 194 14 81 chr10 6413519 6413580 -139175708 + MLT1B LTR MaLR 326 390 0 1310 224 88 42 chr10 6413582 6413861 -139175427 - Charlie4a DNA MER1_type -1458 503 193 1676 160 38 0 chr10 6413861 6414154 -139175134 + AluJb SINE Alu 1 304 -8 1310 224 88 42 chr10 6414154 6414330 -139174958 - Charlie4a DNA MER1_type -1768 193 27 1304 95 53 0 chr10 6414922 6415111 -139174177 - AluSg/x SINE Alu -15 297 99 2098 208 69 53 chr10 6415960 6416135 -139173153 - L1MD2 LINE L1 -24 6335 6164 261 0 0 0 chr10 6416135 6416164 -139173124 + (TG)n Simple_repeat Simple_repeat 2 30 0 2098 208 69 53 chr10 6416164 6416391 -139172897 - L1MD2 LINE L1 -195 6164 5942 2563 111 24 77 chr10 6416391 6416518 -139172770 + MSTA LTR MaLR 1 133 -295 2149 94 43 0 chr10 6416518 6416817 -139172471 - AluSx SINE Alu 0 312 1 2563 111 24 77 chr10 6416817 6417141 -139172147 + MSTA LTR MaLR 133 428 0 2098 208 69 53 chr10 6417141 6417218 -139172070 - L1MD2 LINE L1 -417 5942 5868 2084 105 0 3 chr10 6417218 6417512 -139171776 - AluSc SINE Alu -16 293 1 2098 208 69 53 chr10 6417512 6417569 -139171719 - L1MD2 LINE L1 -491 5868 5813 2031 113 20 3 chr10 6417569 6417871 -139171417 - AluSg SINE Alu -3 307 1 2098 208 69 53 chr10 6417871 6417956 -139171332 - L1MD2 LINE L1 -546 5813 5701 322 226 137 20 chr10 6418002 6418104 -139171184 + L2 LINE L2 3159 3272 0 441 350 96 8 chr10 6418129 6418369 -139170919 + MIR SINE MIR 1 261 -1 383 253 174 47 chr10 6419760 6420013 -139169275 + MLT1J2 LTR MaLR 20 304 -146 3071 87 4 24 chr10 6420102 6420553 -139168735 - L1PB1 LINE L1 0 6151 5710 432 254 61 9 chr10 6420683 6420797 -139168491 - MLT1J LTR MaLR -368 143 24 1223 137 0 0 chr10 6421255 6421430 -139167858 - FAM SINE Alu 0 175 1 2280 98 0 7 chr10 6422268 6422564 -139166724 - AluSq SINE Alu -19 294 1 621 132 0 0 chr10 6422769 6422860 -139166428 - MLT2A2 LTR ERVL -147 306 216 2534 150 17 2 chr10 6422932 6423338 -139165950 + LTR45B LTR ERV1 3 414 -75 2014 222 12 20 chr10 6423370 6423860 -139165428 - L1MCa LINE L1 -3388 3176 2691 3398 169 30 14 chr10 6423865 6424521 -139164767 - L1MB4 LINE L1 0 6180 5514 2273 124 3 0 chr10 6424522 6424829 -139164459 - AluSq SINE Alu -5 308 1 2508 145 15 0 chr10 6424849 6425255 -139164033 - L1MB1 LINE L1 -5 6163 5752 2458 79 0 0 chr10 6425269 6425573 -139163715 - AluY SINE Alu -7 304 1 1527 180 29 26 chr10 6425573 6425663 -139163625 - L1MCa LINE L1 -3948 2616 2528 2090 154 0 0 chr10 6425663 6425974 -139163314 - AluSx SINE Alu -1 311 1 1527 180 29 26 chr10 6425974 6426301 -139162987 - L1MCa LINE L1 -4036 2528 2273 2023 151 3 66 chr10 6426304 6426382 -139162906 + MER7A DNA MER2_type 7 88 -2950 225 0 0 0 chr10 6426382 6426407 -139162881 + (TTTTG)n Simple_repeat Simple_repeat 1 25 0 1876 151 0 11 chr10 6426407 6426686 -139162602 - AluSx SINE Alu -36 276 1 2023 151 3 66 chr10 6426686 6426971 -139162317 + MER7A DNA MER2_type 86 346 0 1809 158 61 24 chr10 6426971 6427499 -139161789 - L1MCa LINE L1 -4290 2274 1767 13080 26 1 0 chr10 6427499 6429774 -139159514 - L1PA3 LINE L1 0 6155 3880 2296 117 0 16 chr10 6429783 6430100 -139159188 - AluSx SINE Alu 0 312 1 1809 158 61 24 chr10 6430100 6430297 -139158991 - L1MCa LINE L1 -4804 1760 1378 1904 141 48 14 chr10 6430580 6430871 -139158417 + AluSx SINE Alu 1 301 -11 2324 120 0 0 chr10 6431242 6431550 -139157738 - AluSx SINE Alu -4 308 1 2588 63 0 16 chr10 6431569 6431885 -139157403 - AluY SINE Alu 0 311 1 2055 135 0 0 chr10 6432639 6432942 -139156346 - AluSx SINE Alu 0 303 1 2868 78 14 0 chr10 6433561 6433920 -139155368 - THE1B LTR MaLR 0 364 1 3788 208 97 39 chr10 6434051 6434512 -139154776 - L1MCa LINE L1 -4850 1195 762 2204 93 0 14 chr10 6434512 6434822 -139154466 - AluSq SINE Alu 0 306 1 3788 208 97 39 chr10 6434822 6435483 -139153805 - L1MCa LINE L1 -5283 762 7 236 30 30 0 chr10 6435495 6435528 -139153760 + (TTTTC)n Simple_repeat Simple_repeat 2 35 0 4479 104 22 2 chr10 6435655 6436277 -139153011 - MER41B LTR ERV1 0 635 1 1678 174 41 0 chr10 6437669 6437962 -139151326 - AluJo SINE Alu -7 305 1 280 325 8 8 chr10 6438994 6439120 -139150168 + L2 LINE L2 2947 3072 -200 252 0 0 0 chr10 6439265 6439293 -139149995 + (T)n Simple_repeat Simple_repeat 1 28 0 303 322 51 17 chr10 6439552 6439670 -139149618 + L2 LINE L2 3138 3259 -13 2271 123 0 19 chr10 6441341 6441657 -139147631 - AluSx SINE Alu -2 310 1 2535 77 7 0 chr10 6441666 6441976 -139147312 - AluSx SINE Alu 0 312 1 342 67 0 0 chr10 6442033 6442046 -139147242 + (CA)n Simple_repeat Simple_repeat 1 58 0 342 67 0 0 chr10 6442046 6442091 -139147197 + (CA)n Simple_repeat Simple_repeat 2 46 0 193 304 81 47 chr10 6442175 6442323 -139146965 - MIR3 SINE MIR -15 193 41 2180 92 44 0 chr10 6442830 6443125 -139146163 + AluSg SINE Alu 2 309 -1 417 265 158 15 chr10 6443154 6443350 -139145938 + MLT1J2 LTR MaLR 111 334 -116 1074 112 0 7 chr10 6443805 6443948 -139145340 - AluSq/x SINE Alu -162 151 10 1057 178 108 91 chr10 6443982 6444268 -139145020 - AluJo SINE Alu -11 301 11 21 0 0 0 chr10 6444277 6444298 -139144990 + AT_rich Low_complexity Low_complexity 1 21 0 802 125 0 76 chr10 6444304 6444448 -139144840 - FLAM_C SINE Alu 0 143 11 1203 169 105 92 chr10 6444482 6444777 -139144511 - AluJo SINE Alu -13 299 1 565 299 35 53 chr10 6444962 6445280 -139144008 - L1MEd LINE L1 -5397 722 411 901 209 0 0 chr10 6445322 6445494 -139143794 - FAM SINE Alu -3 172 1 1345 225 55 55 chr10 6446170 6446592 -139142696 + MLT2C2 LTR ERVL 1 422 -42 338 105 0 18 chr10 6446604 6446661 -139142627 + (CA)n Simple_repeat Simple_repeat 2 57 0 277 57 0 0 chr10 6446661 6446696 -139142592 + MLT2D LTR ERVL 367 401 -13 618 120 17 8 chr10 6446796 6446913 -139142375 + CT-rich Low_complexity Low_complexity 2 119 0 1936 178 62 11 chr10 6447064 6447435 -139141853 + MSTD LTR MaLR 7 396 0 2184 122 0 10 chr10 6447527 6447831 -139141457 + AluSx SINE Alu 1 301 -11 652 218 40 111 chr10 6448198 6448578 -139140710 + L1MC5 LINE L1 7340 7692 -269 370 132 0 0 chr10 6448579 6448632 -139140656 + Alu SINE Alu 2 54 -248 1735 133 0 49 chr10 6448633 6448918 -139140370 + AluSx SINE Alu 12 282 -30 509 268 82 10 chr10 6448952 6449146 -139140142 + L1MC5 LINE L1 7678 7885 -76 2184 114 16 0 chr10 6450768 6451074 -139138214 + AluSx SINE Alu 1 311 -1 3080 248 78 29 chr10 6451729 6452726 -139136562 + MER97b DNA MER1_type? 1 1046 -7 291 362 60 0 chr10 6452937 6453086 -139136202 + L2 LINE L2 3114 3271 -1 866 277 74 38 chr10 6453580 6454053 -139135235 - L1ME4a LINE L1 -25 6096 5607 819 70 53 0 chr10 6454575 6454689 -139134599 - MER41A LTR ERV1 0 554 435 248 218 39 26 chr10 6454693 6454771 -139134517 - L1MC5 LINE L1 -519 7442 7364 2105 131 13 7 chr10 6454776 6455082 -139134206 - AluSx SINE Alu -4 308 1 330 305 135 10 chr10 6455448 6455648 -139133640 + LTR16A LTR ERVL 1 225 -225 1927 134 62 0 chr10 6455767 6456059 -139133229 - AluSx SINE Alu -2 310 1 199 206 0 0 chr10 6458374 6458408 -139130880 - L2 LINE L2 -49 3264 3231 3182 149 28 0 chr10 6458408 6458917 -139130371 + L1PB4 LINE L1 5593 6115 -41 35 63 0 0 chr10 6458930 6458993 -139130295 + AT_rich Low_complexity Low_complexity 1 63 0 2129 125 3 10 chr10 6459213 6459516 -139129772 + AluJb SINE Alu 1 301 -11 1353 193 120 7 chr10 6459746 6460021 -139129267 - AluJb SINE Alu -6 306 1 265 231 39 0 chr10 6460251 6460303 -139128985 - MLT1K LTR MaLR -357 231 178 286 322 80 75 chr10 6460478 6460931 -139128357 + L2 LINE L2 449 903 -2411 190 324 66 81 chr10 6460934 6461070 -139128218 + L2 LINE L2 1089 1222 -2092 936 311 97 40 chr10 6461152 6462331 -139126957 + L2 LINE L2 2056 3308 -5 1307 201 21 49 chr10 6462417 6462705 -139126583 - MLT2B1 LTR ERVL -8 512 233 1390 198 52 7 chr10 6463004 6463292 -139125996 + L1M3 LINE L1 5443 5743 -437 2605 145 9 53 chr10 6463292 6463727 -139125561 + L1MB3 LINE L1 5679 6089 -94 2076 124 0 10 chr10 6463727 6464026 -139125262 - AluSx SINE Alu -16 296 1 2605 145 9 53 chr10 6464026 6464115 -139125173 + L1MB3 LINE L1 6089 6180 -3 1778 170 3 14 chr10 6464266 6464560 -139124728 - AluSx SINE Alu -21 291 1 371 289 108 49 chr10 6465135 6465404 -139123884 + MER109 Unknown Unknown 70 322 -2110 2311 96 11 20 chr10 6465404 6465759 -139123529 + L1PA10 LINE L1 5817 6168 0 371 289 108 49 chr10 6465759 6465847 -139123441 + MER109 Unknown Unknown 322 779 -1653 235 286 12 36 chr10 6465931 6466015 -139123273 + MER109 Unknown Unknown 536 617 -1815 225 200 0 20 chr10 6465996 6466046 -139123242 - MER109 Unknown Unknown -1778 654 606 * 2604 217 65 74 chr10 6466199 6467081 -139122207 + MER109 Unknown Unknown 535 1408 -1024 209 276 0 0 chr10 6468306 6468364 -139120924 + T-rich Low_complexity Low_complexity 2 59 0 697 144 17 8 chr10 6468969 6469087 -139120201 - FLAM_C SINE Alu -18 125 7 1387 140 4 13 chr10 6469216 6469445 -139119843 - AluJb SINE Alu 0 312 86 2295 58 0 42 chr10 6469749 6470058 -139119230 - AluY SINE Alu -15 296 1 387 244 151 8 chr10 6470076 6470195 -139119093 + MER5B DNA MER1_type 1 136 -42 259 152 0 22 chr10 6470300 6470346 -139118942 + MER20 DNA MER1_type 100 144 -75 495 167 0 0 chr10 6470346 6470436 -139118852 + GA-rich Low_complexity Low_complexity 1 90 0 262 146 83 0 chr10 6470436 6470484 -139118804 - AluJ/FRAM SINE Alu -20 282 231 1405 195 54 41 chr10 6470600 6470969 -139118319 + MLT1A2 LTR MaLR 1 374 0 2085 124 0 7 chr10 6471170 6471482 -139117806 + AluSx SINE Alu 1 312 0 1334 146 24 0 chr10 6471708 6471920 -139117368 + MER20 DNA MER1_type 1 217 -2 186 368 105 0 chr10 6471950 6472064 -139117224 - MIR SINE MIR -77 185 60 257 206 0 44 chr10 6472758 6472809 -139116479 - MLT2B1 LTR ERVL 0 520 471 2325 120 52 14 chr10 6472809 6473158 -139116130 - THE1B LTR MaLR 0 364 3 257 206 0 44 chr10 6473158 6473174 -139116114 - MLT2B1 LTR ERVL -49 471 456 1350 201 99 43 chr10 6473227 6473623 -139115665 - MLT2B1 LTR ERVL -37 377 4 936 177 6 6 chr10 6473765 6473929 -139115359 + MER3 DNA MER1_type 41 204 -5 480 231 0 0 chr10 6474162 6474266 -139115022 - L2 LINE L2 0 3272 3169 189 286 91 0 chr10 6474360 6474437 -139114851 - L2 LINE L2 -42 3271 3188 312 291 64 71 chr10 6474492 6474528 -139114760 - MIR SINE MIR -75 187 152 2185 110 7 7 chr10 6474528 6474827 -139114461 - AluSg SINE Alu -11 299 1 312 291 64 71 chr10 6474827 6474931 -139114357 - MIR SINE MIR -110 152 48 237 98 0 0 chr10 6475627 6475668 -139113620 + (TTTC)n Simple_repeat Simple_repeat 1 41 0 1578 163 64 34 chr10 6475672 6475695 -139113593 - AluJb SINE Alu -8 304 283 437 0 0 19 chr10 6475695 6475749 -139113539 + (TCTCC)n Simple_repeat Simple_repeat 2 54 0 1578 163 64 34 chr10 6475749 6476020 -139113268 - AluJb SINE Alu -29 283 1 1232 185 121 14 chr10 6476020 6476301 -139112987 - AluJo SINE Alu -1 311 1 22 35 0 0 chr10 6476499 6476528 -139112760 + AT_rich Low_complexity Low_complexity 1 29 0 431 280 159 5 chr10 6476698 6476887 -139112401 + MLT1I LTR MaLR 186 403 -6 180 191 132 29 chr10 6476957 6477025 -139112263 + L3b LINE CR1 1263 1337 -246 327 338 23 15 chr10 6477077 6477210 -139112078 + MIR SINE MIR 21 154 -108 306 197 26 0 chr10 6477321 6477438 -139111850 + (TA)n Simple_repeat Simple_repeat 2 121 0 239 231 0 10 chr10 6477485 6477589 -139111699 + (TA)n Simple_repeat Simple_repeat 1 103 0 305 309 79 10 chr10 6478529 6478811 -139110477 - L2 LINE L2 -266 3047 2696 3212 152 9 12 chr10 6478821 6479379 -139109909 + L1MB3 LINE L1 5587 6142 -41 1950 130 3 63 chr10 6479379 6479694 -139109594 + AluSx SINE Alu 1 296 -16 227 189 0 0 chr10 6479694 6479747 -139109541 + (TCTA)n Simple_repeat Simple_repeat 4 56 0 305 96 19 0 chr10 6479747 6479799 -139109489 + L1MB3 LINE L1 6131 6183 0 446 173 6 0 chr10 6480503 6480583 -139108705 + L1MA7 LINE L1 5857 5940 -240 1447 96 10 38 chr10 6480584 6480793 -139108495 - AluSg/x SINE Alu -11 301 99 1540 183 39 39 chr10 6480794 6481149 -139108139 + L1MA7 LINE L1 5935 6289 -2 2187 111 17 0 chr10 6481830 6482128 -139107160 + AluSx SINE Alu 3 305 -7 341 356 8 0 chr10 6482722 6482840 -139106448 + (TG)n Simple_repeat Simple_repeat 2 120 0 660 240 121 96 chr10 6483789 6484268 -139105020 + MLT1J LTR MaLR 1 491 -20 1256 103 0 11 chr10 6484776 6485069 -139104219 + (TCCA)n Simple_repeat Simple_repeat 1 469 0 407 266 87 39 chr10 6485102 6485309 -139103979 - MIR SINE MIR -44 218 2 1700 178 16 7 chr10 6486346 6486655 -139102633 - AluJo SINE Alu 0 312 1 254 237 101 35 chr10 6488410 6488579 -139100709 + Charlie7 DNA MER1_type 2390 2569 -43 2284 91 0 0 chr10 6488599 6488886 -139100402 - AluSx SINE Alu -12 300 14 180 97 0 0 chr10 6488905 6488936 -139100352 + (A)n Simple_repeat Simple_repeat 1 31 0 1477 204 36 68 chr10 6490142 6490616 -139098672 + L1MC5 LINE L1 6726 7183 -787 348 266 65 72 chr10 6490810 6491088 -139098200 - L2 LINE L2 -190 3082 2807 312 227 0 0 chr10 6491447 6491522 -139097766 + MER53 DNA DNA 1 75 -114 341 237 68 59 chr10 6491683 6491696 -139097592 - L2 LINE L2 -13 3300 3289 495 0 0 0 chr10 6491696 6491751 -139097537 + (TCCA)n Simple_repeat Simple_repeat 2 56 0 341 237 68 59 chr10 6491751 6491855 -139097433 - L2 LINE L2 -24 3289 3182 592 228 153 36 chr10 6491908 6492242 -139097046 + L1ME4a LINE L1 5745 6117 -4 200 333 0 0 chr10 6492324 6492387 -139096901 + MIR SINE MIR 68 130 -78 267 31 0 0 chr10 6492593 6492625 -139096663 + (TG)n Simple_repeat Simple_repeat 2 33 0 210 250 120 28 chr10 6494518 6494626 -139094662 + MIR SINE MIR 83 200 -62 437 234 80 106 chr10 6495666 6496016 -139093272 - L1MEd LINE L1 -4869 1250 910 2889 144 214 113 chr10 6496033 6496207 -139093081 - L1 LINE L1 -1833 5273 5118 7581 26 0 4 chr10 6496207 6497224 -139092064 - L1PA3 LINE L1 0 6155 5132 2889 144 214 113 chr10 6497224 6498078 -139091210 - L1 LINE L1 -1988 5118 4141 3890 210 70 51 chr10 6498079 6498745 -139090543 - L1 LINE L1 -3024 4082 3431 471 78 0 0 chr10 6498745 6498809 -139090479 + (TA)n Simple_repeat Simple_repeat 1 64 0 3890 210 70 51 chr10 6498809 6501257 -139088031 - L1 LINE L1 -3675 3431 7 182 373 25 8 chr10 6502999 6503117 -139086171 + L2 LINE L2 2907 3026 -246 557 120 9 56 chr10 6503516 6503578 -139085710 + L1MB3 LINE L1 6081 6137 -46 1540 223 13 21 chr10 6503578 6503955 -139085333 - MLT1A2 LTR MaLR 0 374 1 557 120 9 56 chr10 6503955 6504000 -139085288 + L1MB3 LINE L1 6137 6183 0 246 216 0 0 chr10 6504027 6504078 -139085210 + L1MC4 LINE L1 6652 6702 -1340 231 114 0 0 chr10 6504085 6504120 -139085168 + (TA)n Simple_repeat Simple_repeat 1 35 0 844 213 100 108 chr10 6504909 6505416 -139083872 - MER34C LTR ERV1 -1 584 80 3057 120 5 0 chr10 6505416 6505848 -139083440 + MER57B LTR ERV1 1 434 0 844 213 100 108 chr10 6505848 6505889 -139083399 - MER34C LTR ERV1 -505 80 40 2474 134 31 24 chr10 6506235 6506660 -139082628 - MSTA LTR MaLR 0 428 1 186 376 77 0 chr10 6507140 6507257 -139082031 - MIR3 SINE MIR -29 179 54 3305 157 35 2 chr10 6507662 6508198 -139081090 + MER41C LTR ERV1 1 554 0 224 302 0 0 chr10 6508335 6508388 -139080900 - MIR SINE MIR -135 73 21 44098 29 21 1 chr10 6508931 6514963 -139074325 - L1HS LINE L1 0 6155 1 901 267 185 18 chr10 6515022 6515494 -139073794 - MLT1G1 LTR MaLR 0 595 1 450 219 203 0 chr10 6515550 6515673 -139073615 - MER5A DNA MER1_type -1 188 41 379 191 0 0 chr10 6515963 6516031 -139073257 + MER57B LTR ERV1 38 105 -329 198 356 45 15 chr10 6516152 6516284 -139073004 - L2 LINE L2 -9 3304 3169 1633 171 29 0 chr10 6516393 6516696 -139072592 - AluJo SINE Alu 0 311 1 1779 193 34 3 chr10 6516701 6517089 -139072199 - L1MA4 LINE L1 0 6300 5901 1773 164 52 27 chr10 6517492 6517857 -139071431 - THE1C LTR MaLR -1 374 1 37 0 0 0 chr10 6517939 6517976 -139071312 + AT_rich Low_complexity Low_complexity 1 37 0 745 222 0 0 chr10 6518252 6518387 -139070901 + MER63A DNA MER1_type 51 185 -25 577 207 117 0 chr10 6518391 6518502 -139070786 + AluJb SINE Alu 137 260 -52 234 330 37 28 chr10 6518584 6518693 -139070595 + L2 LINE L2 3151 3260 -12 2241 110 78 26 chr10 6518734 6519080 -139070208 - THE1B LTR MaLR 0 364 1 11980 86 14 3 chr10 6519080 6520642 -139068646 - THE1B-int LTR MaLR 0 1580 1 2267 97 69 26 chr10 6520642 6520991 -139068297 - THE1B LTR MaLR 0 364 1 1608 175 33 0 chr10 6522929 6523230 -139066058 + AluJo SINE Alu 1 310 0 216 0 0 0 chr10 6523573 6523597 -139065691 + (T)n Simple_repeat Simple_repeat 1 24 0 201 196 0 0 chr10 6526145 6526191 -139063097 + (CA)n Simple_repeat Simple_repeat 1 46 0 576 223 0 0 chr10 6526202 6526377 -139062911 + (CA)n Simple_repeat Simple_repeat 2 176 0 264 176 0 0 chr10 6526407 6526458 -139062830 - MER4-int LTR ERV1 -5436 1162 1112 546 199 0 32 chr10 6526476 6526662 -139062626 + (CA)n Simple_repeat Simple_repeat 1 180 0 2289 110 13 0 chr10 6526770 6527078 -139062210 + AluSx SINE Alu 1 312 0 395 293 93 37 chr10 6527204 6527557 -139061731 - HAL1 LINE L1 -4 2503 2095 1454 251 73 19 chr10 6527557 6528024 -139061264 - MLT1F1 LTR MaLR 0 567 76 2192 215 78 23 chr10 6528035 6528597 -139060691 - MLT1E LTR MaLR 0 593 1 330 234 138 0 chr10 6528610 6528704 -139060584 - L1MC4a LINE L1 0 7808 7731 * 4016 270 113 34 chr10 6528702 6529928 -139059360 - HAL1 LINE L1 -419 2088 652 5065 104 9 11 chr10 6529928 6530621 -139058667 + LTR8 LTR ERV1 1 691 0 4016 270 113 34 chr10 6530621 6531328 -139057960 - HAL1 LINE L1 -1855 652 2 3970 118 37 5 chr10 6531650 6532243 -139057045 - LTR9 LTR ERV1 0 612 1 879 223 72 5 chr10 6532511 6532704 -139056584 - MER58A DNA MER1_type -18 206 1 2198 94 0 16 chr10 6532863 6533170 -139056118 - AluSg SINE Alu -8 302 1 1363 129 0 53 chr10 6534231 6534352 -139054936 - LTR8 LTR ERV1 0 691 584 2567 49 0 7 chr10 6534352 6534659 -139054629 - AluY SINE Alu -6 305 1 1363 129 0 53 chr10 6534659 6534746 -139054542 - LTR8 LTR ERV1 -107 584 494 2623 87 45 6 chr10 6534754 6535111 -139054177 - LTR8 LTR ERV1 -320 371 1 4241 193 19 30 chr10 6535548 6536406 -139052882 - L1MB7 LINE L1 0 6184 5318 1947 124 32 0 chr10 6536406 6536689 -139052599 - AluSx SINE Alu -20 292 1 4241 193 19 30 chr10 6536689 6536938 -139052350 - L1MB7 LINE L1 -866 5318 5068 2221 118 3 3 chr10 6536938 6537242 -139052046 + AluSq SINE Alu 1 304 -9 4241 193 19 30 chr10 6537242 6537634 -139051654 - L1MB7 LINE L1 -1116 5068 4698 235 355 74 8 chr10 6537888 6538009 -139051279 - L2 LINE L2 -1 3271 3143 1790 140 20 43 chr10 6538038 6538338 -139050950 - AluJb SINE Alu -1 311 19 225 175 0 0 chr10 6538510 6538550 -139050738 + L2 LINE L2 3258 3297 -16 225 291 64 0 chr10 6539367 6539477 -139049811 + MIR SINE MIR 16 132 -130 291 309 50 55 chr10 6539496 6539697 -139049591 + L2 LINE L2 3107 3306 -7 233 333 11 0 chr10 6539684 6539777 -139049511 + MIR SINE MIR 130 223 -39 * 316 233 14 0 chr10 6539853 6539926 -139049362 - MER94 DNA DNA -13 121 48 620 212 8 15 chr10 6540039 6540171 -139049117 + FLAM_A SINE Alu 12 142 0 2028 169 92 43 chr10 6540253 6540698 -139048590 + LTR24 LTR ERV1 1 467 0 2200 66 38 0 chr10 6541354 6541641 -139047647 + L1PA7 LINE L1 5853 6150 -4 198 0 0 0 chr10 6541667 6541689 -139047599 + (A)n Simple_repeat Simple_repeat 1 22 0 1776 143 89 4 chr10 6541949 6542229 -139047059 + AluSg SINE Alu 1 304 -6 223 179 0 71 chr10 6543073 6543129 -139046159 + L2 LINE L2 3262 3313 0 464 86 14 0 chr10 6543513 6543583 -139045705 + (GA)n Simple_repeat Simple_repeat 2 72 0 753 125 24 18 chr10 6543663 6543831 -139045457 + CT-rich Low_complexity Low_complexity 3 171 0 909 148 0 16 chr10 6543834 6544017 -139045271 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 802 202 11 7 chr10 6544008 6544270 -139045018 + CT-rich Low_complexity Low_complexity 1 262 0 * 1885 167 13 3 chr10 6544278 6544578 -139044710 - AluSx SINE Alu -9 303 1 386 151 48 8 chr10 6546766 6546892 -139042396 + (TG)n Simple_repeat Simple_repeat 1 131 0 265 240 48 19 chr10 6546909 6547013 -139042275 + (TG)n Simple_repeat Simple_repeat 2 108 0 1603 204 54 104 chr10 6547022 6547655 -139041633 - L1MC5 LINE L1 -72 7889 7289 2188 109 10 0 chr10 6547656 6547950 -139041338 - AluSq SINE Alu -16 297 1 498 290 105 29 chr10 6548067 6548381 -139040907 - L1ME LINE L1 -397 5773 5436 2285 122 0 0 chr10 6548586 6548890 -139040398 - AluSx SINE Alu -8 304 1 298 250 43 122 chr10 6549847 6549996 -139039292 + MER20B DNA MER1_type 43 176 -43 2271 101 20 0 chr10 6549996 6550293 -139038995 + AluSx SINE Alu 1 303 -9 298 250 43 122 chr10 6550293 6550331 -139038957 + MER20B DNA MER1_type 176 215 -4 559 288 7 0 chr10 6550485 6550638 -139038650 + MIR SINE MIR 109 262 0 787 181 100 0 chr10 6550882 6551042 -139038246 + MER58A DNA MER1_type 46 221 -3 659 218 84 14 chr10 6551362 6551504 -139037784 - FRAM SINE Alu -13 153 2 420 311 73 39 chr10 6551625 6552033 -139037255 + L1M4 LINE L1 4562 4983 -1163 2487 75 0 0 chr10 6552240 6552547 -139036741 - AluY SINE Alu -4 307 1 297 0 0 0 chr10 6552770 6552803 -139036485 + (CA)n Simple_repeat Simple_repeat 1 33 0 189 0 0 0 chr10 6552833 6552854 -139036434 + (CA)n Simple_repeat Simple_repeat 1 21 0 940 269 78 14 chr10 6553180 6553526 -139035762 + L1MEc LINE L1 39 406 -5990 1686 260 38 66 chr10 6553529 6554267 -139035021 + L1MEc LINE L1 613 1325 -5071 2109 134 0 0 chr10 6554267 6554558 -139034730 - AluSx SINE Alu -21 291 1 1686 260 38 66 chr10 6554558 6554687 -139034601 + L1MEc LINE L1 1325 1456 -4940 474 18 0 0 chr10 6554697 6554752 -139034536 + (TA)n Simple_repeat Simple_repeat 1 55 0 2182 113 0 10 chr10 6555042 6555342 -139033946 - AluSx SINE Alu -15 297 1 5219 90 3 4 chr10 6555513 6556223 -139033065 - L1PB2 LINE L1 -1 6150 5442 776 147 41 14 chr10 6558066 6558506 -139030782 + (TCTA)n Simple_repeat Simple_repeat 1 452 0 205 310 17 0 chr10 6558533 6558591 -139030697 + (TG)n Simple_repeat Simple_repeat 2 60 0 2068 239 95 86 chr10 6558618 6558981 -139030307 - HAL1 LINE L1 -131 2376 2018 2173 135 0 0 chr10 6558981 6559284 -139030004 - AluSx SINE Alu -9 303 1 2024 81 0 4 chr10 6559293 6559540 -139029748 - AluSg SINE Alu -22 288 43 2068 239 95 86 chr10 6559540 6560411 -139028877 - HAL1 LINE L1 -496 2011 1121 1782 181 3 0 chr10 6560500 6560792 -139028496 + AluJo SINE Alu 3 295 -17 635 211 24 0 chr10 6560792 6560915 -139028373 - MER3 DNA MER1_type -80 129 4 273 352 24 8 chr10 6561465 6561590 -139027698 - MIR SINE MIR 0 262 136 380 268 31 24 chr10 6561617 6561744 -139027544 - MIR SINE MIR -62 146 19 465 333 75 9 chr10 6561750 6561963 -139027325 + MIR SINE MIR 11 237 -25 2420 78 7 3 chr10 6564521 6564817 -139024471 - AluSg SINE Alu -13 297 1 734 144 0 24 chr10 6564988 6565113 -139024175 + FLAM_C SINE Alu 21 142 -1 260 296 167 0 chr10 6565539 6565647 -139023641 - MIR3 SINE MIR -30 178 53 25 31 0 0 chr10 6565988 6566020 -139023268 + AT_rich Low_complexity Low_complexity 1 32 0 1619 78 0 0 chr10 6566138 6566331 -139022957 - AluSq SINE Alu -120 193 1 202 274 0 16 chr10 6568025 6568087 -139021201 + GA-rich Low_complexity Low_complexity 4 64 0 1071 174 76 27 chr10 6569014 6569238 -139020050 - AluJb SINE Alu 0 312 78 1642 113 0 0 chr10 6569238 6569450 -139019838 - AluSq SINE Alu -101 212 1 271 231 141 25 chr10 6570458 6570579 -139018709 + MIR SINE MIR 51 185 -77 529 317 0 11 chr10 6570591 6570771 -139018517 + (CA)n Simple_repeat Simple_repeat 2 179 0 225 243 0 0 chr10 6570800 6570870 -139018418 + (CA)n Simple_repeat Simple_repeat 1 70 0 335 248 128 18 chr10 6571898 6572007 -139017281 + MIR3 SINE MIR 73 193 -15 294 323 79 0 chr10 6572640 6572767 -139016521 + L2 LINE L2 3136 3272 0 236 278 33 0 chr10 6572905 6572995 -139016293 + L1PB4 LINE L1 6064 6156 0 2334 100 10 10 chr10 6573044 6573355 -139015933 + AluSx SINE Alu 1 311 -1 32 0 0 0 chr10 6573665 6573697 -139015591 + AT_rich Low_complexity Low_complexity 1 32 0 1666 57 0 0 chr10 6574211 6574404 -139014884 - AluY SINE Alu -13 298 106 1320 105 96 0 chr10 6574900 6575109 -139014179 + MER30 DNA MER1_type 1 229 -1 1764 160 3 7 chr10 6575136 6575423 -139013865 + AluJb SINE Alu 11 296 -16 453 264 16 8 chr10 6575596 6575717 -139013571 - L1MD2 LINE L1 -17 6342 6221 1431 212 67 6 chr10 6575734 6576064 -139013224 - L1MD2 LINE L1 -215 6144 5795 1471 217 47 25 chr10 6576455 6576814 -139012474 + MLT1A2 LTR MaLR 1 367 -7 2471 75 0 7 chr10 6576942 6577248 -139012040 - AluY SINE Alu -7 304 1 1775 170 0 27 chr10 6577893 6578193 -139011095 - AluJo SINE Alu -20 292 1 363 203 14 0 chr10 6578716 6578785 -139010503 - MER8 DNA MER2_type 0 239 170 * 2536 139 59 5 chr10 6578774 6579197 -139010091 + Tigger2 DNA MER2_type 2273 2718 0 2091 100 94 26 chr10 6579204 6579555 -139009733 + THE1C LTR MaLR 1 375 0 2101 116 14 3 chr10 6580002 6580294 -139008994 + AluSx SINE Alu 1 295 -17 1488 108 5 0 chr10 6580543 6580737 -139008551 - AluSp SINE Alu -118 195 1 492 191 35 43 chr10 6580752 6580867 -139008421 - FLAM_A SINE Alu -1 141 28 2286 111 0 0 chr10 6581975 6582272 -139007016 + AluSq SINE Alu 1 297 -16 1817 164 43 27 chr10 6582606 6582977 -139006311 + L1MA8 LINE L1 5639 6015 -276 943 175 18 0 chr10 6582975 6583146 -139006142 + L1MB2 LINE L1 5768 5941 -230 * 332 122 0 0 chr10 6583155 6583204 -139006084 + MADE1 DNA Mariner 26 74 -6 1306 134 29 34 chr10 6583204 6583358 -139005930 + L1MB2 LINE L1 5932 6086 -85 2083 113 48 0 chr10 6583358 6583651 -139005637 - AluSx SINE Alu -4 308 2 1306 134 29 34 chr10 6583651 6583735 -139005553 + L1MB2 LINE L1 6086 6169 -2 219 146 0 0 chr10 6583987 6584028 -139005260 + (CA)n Simple_repeat Simple_repeat 2 42 0 2302 71 7 0 chr10 6584165 6584445 -139004843 + AluSx SINE Alu 29 310 -2 181 356 54 13 chr10 6585396 6585545 -139003743 - MIR SINE MIR -44 218 64 2439 91 0 3 chr10 6585653 6585961 -139003327 - AluSx SINE Alu -5 307 1 2456 74 0 3 chr10 6586422 6586719 -139002569 + AluSc SINE Alu 1 296 -13 2168 110 3 3 chr10 6587711 6588002 -139001286 - AluSc SINE Alu -18 291 1 38262 31 4 0 chr10 6588081 6593380 -138995908 + L1PA3 LINE L1 840 6155 0 242 327 135 18 chr10 6593819 6594146 -138995142 - L2 LINE L2 -817 2497 2133 683 221 25 25 chr10 6595022 6595185 -138994103 + L1MD2 LINE L1 6195 6357 -2 263 221 91 0 chr10 6595486 6595563 -138993725 - MIR SINE MIR -70 192 109 209 267 244 36 chr10 6596602 6596827 -138992461 - L3 LINE CR1 -149 1428 1157 274 266 0 0 chr10 6596827 6596891 -138992397 + L1MD2 LINE L1 6218 6281 -78 481 333 24 51 chr10 6596891 6597224 -138992064 - L3 LINE CR1 -427 1150 827 1427 203 49 7 chr10 6597243 6597529 -138991759 - AluJo SINE Alu -14 298 1 803 199 197 102 chr10 6598751 6599172 -138990116 + MLT1C LTR MaLR 4 464 -3 1990 138 3 22 chr10 6599776 6600087 -138989201 - AluSx SINE Alu -7 305 1 798 130 23 23 chr10 6600121 6600601 -138988687 + (TCCA)n Simple_repeat Simple_repeat 1 480 0 2092 134 0 0 chr10 6602018 6602316 -138986972 + AluSx SINE Alu 1 298 -14 289 312 98 17 chr10 6602495 6602668 -138986620 + L3b LINE CR1 1287 1473 -110 2125 126 7 0 chr10 6603741 6604043 -138985245 - AluSx SINE Alu -8 304 1 396 232 145 7 chr10 6606200 6606338 -138982950 + MIR SINE MIR 47 203 -59 1010 87 0 6 chr10 6606592 6606753 -138982535 + (GA)n Simple_repeat Simple_repeat 1 160 0 277 219 68 14 chr10 6606983 6607056 -138982232 + MIR SINE MIR 68 144 -64 700 192 8 0 chr10 6607224 6607344 -138981944 + FLAM_A SINE Alu 4 124 -9 243 270 0 0 chr10 6608249 6608312 -138980976 + MIR SINE MIR 180 242 -20 532 296 44 52 chr10 6608395 6608645 -138980643 - MER115 DNA AcHobo -1 692 445 262 286 169 0 chr10 6608642 6608719 -138980569 - MER115 DNA AcHobo -426 267 178 * 311 275 11 0 chr10 6608980 6609071 -138980217 + MIR3 SINE MIR 109 200 -8 574 164 27 0 chr10 6609124 6609234 -138980054 + L1MC1 LINE L1 5792 5904 -429 1930 114 88 0 chr10 6609964 6610237 -138979051 + AluSx SINE Alu 1 297 -15 2223 108 3 32 chr10 6610756 6611096 -138978192 + AluSx SINE Alu 1 312 0 2503 76 0 0 chr10 6611322 6611626 -138977662 + AluY SINE Alu 1 304 -7 1512 228 198 92 chr10 6611800 6612002 -138977286 + LTR24B LTR ERV1 1 180 -455 2179 114 7 3 chr10 6612002 6612308 -138976980 - AluSq SINE Alu -6 307 1 1512 228 198 92 chr10 6612308 6612680 -138976608 + LTR24B LTR ERV1 180 635 0 1061 24 87 0 chr10 6615333 6615460 -138973828 - MER85 DNA T2_type -1 138 1 336 303 30 0 chr10 6615883 6616015 -138973273 - L1ME LINE L1 -297 5824 5689 252 323 152 0 chr10 6616541 6616640 -138972648 + L2 LINE L2 3144 3257 -15 2449 89 0 0 chr10 6616881 6617210 -138972078 + AluSx SINE Alu 1 312 0 298 242 156 8 chr10 6617561 6617689 -138971599 + L1ME4a LINE L1 5975 6121 0 2075 102 3 71 chr10 6618943 6619265 -138970023 + AluSx SINE Alu 1 300 -12 256 316 88 20 chr10 6619792 6619963 -138969325 + MIR SINE MIR 23 202 -60 243 239 14 28 chr10 6621267 6621338 -138967950 + CT-rich Low_complexity Low_complexity 2 71 0 961 167 80 0 chr10 6621448 6621610 -138967678 + MLT1B LTR MaLR 3 177 -213 591 218 24 0 chr10 6621613 6621737 -138967551 + FLAM_A SINE Alu 1 127 -15 971 208 9 28 chr10 6621742 6621936 -138967352 + MLT1B LTR MaLR 179 370 -20 2470 120 25 6 chr10 6621936 6622293 -138966995 - THE1B LTR MaLR 0 364 1 971 208 9 28 chr10 6622293 6622314 -138966974 + MLT1B LTR MaLR 370 390 0 1747 170 3 7 chr10 6623427 6623727 -138965561 + AluSx SINE Alu 1 299 -13 1941 129 181 38 chr10 6625614 6626039 -138963249 + MER66B LTR ERV1 1 486 0 2387 90 0 23 chr10 6627011 6627321 -138961967 + AluSx SINE Alu 1 303 -9 218 195 0 0 chr10 6627481 6627522 -138961766 + L2 LINE L2 3213 3253 -19 2326 95 7 0 chr10 6627683 6627979 -138961309 - AluSx SINE Alu -14 298 1 1966 125 7 10 chr10 6628088 6628376 -138960912 - AluJo SINE Alu -25 287 1 203 333 0 0 chr10 6628825 6628888 -138960400 + GA-rich Low_complexity Low_complexity 4 66 0 * 214 328 11 33 chr10 6628842 6629025 -138960263 + G-rich Low_complexity Low_complexity 2 180 0 1648 155 15 92 chr10 6629741 6630076 -138959212 + AluJo SINE Alu 3 311 -1 510 202 64 35 chr10 6631706 6631879 -138957409 - MIR SINE MIR -57 205 28 1210 184 44 41 chr10 6632446 6632766 -138956522 + MER33 DNA MER1_type 4 324 0 257 321 27 27 chr10 6633010 6633122 -138956166 + MIR3 SINE MIR 13 124 -84 519 296 145 37 chr10 6633958 6634529 -138954759 + L2 LINE L2 2070 2702 -612 250 311 110 6 chr10 6634646 6634810 -138954478 + L2 LINE L2 2878 3058 -255 847 187 30 0 chr10 6635063 6635229 -138954059 + L1PB4 LINE L1 5959 6129 -27 2267 127 0 3 chr10 6635229 6635537 -138953751 + AluSx SINE Alu 1 307 -5 26 0 0 0 chr10 6635574 6635600 -138953688 + AT_rich Low_complexity Low_complexity 1 26 0 1252 140 0 0 chr10 6635961 6636140 -138953148 - AluSg/x SINE Alu -3 309 131 24 32 0 0 chr10 6639562 6639593 -138949695 + AT_rich Low_complexity Low_complexity 1 31 0 275 185 17 17 chr10 6639662 6639781 -138949507 + (TA)n Simple_repeat Simple_repeat 2 120 0 2233 110 3 10 chr10 6640835 6641145 -138948143 + AluSp SINE Alu 1 308 -5 24 24 0 24 chr10 6643066 6643086 -138946202 + AT_rich Low_complexity Low_complexity 1 20 -21 1804 164 3 3 chr10 6643086 6643372 -138945916 - AluJo SINE Alu -26 286 1 24 24 0 24 chr10 6643372 6643393 -138945895 + AT_rich Low_complexity Low_complexity 20 41 0 2434 77 3 0 chr10 6644187 6644487 -138944801 - AluY SINE Alu -10 301 1 312 172 0 0 chr10 6644693 6644751 -138944537 + CT-rich Low_complexity Low_complexity 3 60 0 655 148 28 23 chr10 6644767 6644943 -138944345 + CT-rich Low_complexity Low_complexity 3 179 0 1666 181 0 0 chr10 6644968 6645239 -138944049 - AluJb SINE Alu -39 273 3 649 189 30 40 chr10 6645522 6645723 -138943565 - L1MC5 LINE L1 -37 7924 7726 354 59 0 20 chr10 6645730 6645781 -138943507 + U5 snRNA snRNA 6 55 -61 407 204 12 70 chr10 6645781 6645953 -138943335 - L1MC5 LINE L1 -234 7727 7566 245 320 100 27 chr10 6647679 6647829 -138941459 + MIR SINE MIR 31 191 -71 1924 82 0 0 chr10 6648773 6649004 -138940284 - AluSq SINE Alu -82 231 1 389 268 77 22 chr10 6649783 6649966 -138939322 + Charlie2a DNA MER1_type 1694 1886 -976 2370 182 38 5 chr10 6650754 6651200 -138938088 - LOR1b LTR ERV1 0 461 1 180 0 0 0 chr10 6652743 6652763 -138936525 + (A)n Simple_repeat Simple_repeat 1 20 0 265 234 177 42 chr10 6653132 6653324 -138935964 + L2 LINE L2 3000 3217 -96 180 276 112 43 chr10 6654118 6654234 -138935054 + MIR3 SINE MIR 51 174 -34 306 0 0 0 chr10 6656884 6656918 -138932370 + (T)n Simple_repeat Simple_repeat 1 34 0 501 230 146 34 chr10 6657265 6657504 -138931784 + L1ME1 LINE L1 5901 6166 0 31 0 0 0 chr10 6657804 6657835 -138931453 + AT_rich Low_complexity Low_complexity 1 31 0 1818 131 18 4 chr10 6657837 6658140 -138931148 + AluSx SINE Alu 3 309 0 230 337 0 0 chr10 6658193 6658276 -138931012 + L1ME LINE L1 5476 5558 -563 210 191 0 0 chr10 6658295 6658342 -138930946 + (TATG)n Simple_repeat Simple_repeat 4 50 0 3686 181 9 13 chr10 6658623 6659297 -138929991 + LTR51 LTR ERV1 1 671 0 226 331 106 7 chr10 6659413 6659555 -138929733 + L2 LINE L2 2255 2410 -904 220 323 24 24 chr10 6659782 6659949 -138929339 + L2 LINE L2 2892 3058 -214 597 252 38 0 chr10 6660727 6660886 -138928402 + MIR SINE MIR 98 262 0 309 26 0 0 chr10 6661184 6661222 -138928066 + (TTATG)n Simple_repeat Simple_repeat 2 39 0 2271 85 4 0 chr10 6661221 6661537 -138927751 - AluSx SINE Alu 0 317 1 1656 154 45 45 chr10 6662463 6662749 -138926539 + AluJo SINE Alu 1 286 -26 23 68 0 0 chr10 6662754 6662798 -138926490 + AT_rich Low_complexity Low_complexity 1 44 0 241 265 56 104 chr10 6663533 6663734 -138925554 - MIR SINE MIR -42 220 30 290 115 0 19 chr10 6664529 6664581 -138924707 - MADE1 DNA Mariner 0 80 30 975 125 0 0 chr10 6664591 6664719 -138924569 + AluSq/x SINE Alu 1 128 -184 415 39 0 0 chr10 6664732 6664784 -138924504 - MADE1 DNA Mariner -28 52 1 322 250 48 0 chr10 6665333 6665417 -138923871 + MIR SINE MIR 175 262 0 192 77 0 0 chr10 6665564 6665590 -138923698 + (TTCA)n Simple_repeat Simple_repeat 1 26 0 297 277 162 41 chr10 6665608 6666454 -138922834 - L2 LINE L2 -40 3273 2329 1610 238 65 99 chr10 6666854 6667573 -138921715 + LTR34 LTR ERV1 1 695 -4 434 219 10 146 chr10 6668974 6669166 -138920122 + MIR SINE MIR 61 226 -36 479 241 84 12 chr10 6670353 6670519 -138918769 + MER5A DNA MER1_type 6 183 -6 944 164 77 24 chr10 6670610 6670818 -138918470 + MER20 DNA MER1_type 1 219 0 419 310 29 17 chr10 6671126 6671300 -138917988 - MIR3 SINE MIR -23 185 10 183 121 61 0 chr10 6672141 6672174 -138917114 + MER5C DNA MER1_type 289 323 -1 1413 125 128 76 chr10 6672298 6672504 -138916784 - L1MC1 LINE L1 0 6333 6102 2246 104 3 0 chr10 6672504 6672792 -138916496 - AluSx SINE Alu -23 289 1 1413 125 128 76 chr10 6672792 6672913 -138916375 - L1MC1 LINE L1 -231 6102 5989 340 360 91 28 chr10 6672932 6673296 -138915992 + L1MB3 LINE L1 4745 5131 -1015 22 0 0 0 chr10 6673376 6673398 -138915890 + AT_rich Low_complexity Low_complexity 1 22 0 242 205 36 36 chr10 6673403 6673486 -138915802 + L1MB3 LINE L1 5296 5378 -786 471 266 86 9 chr10 6673529 6673802 -138915486 + MER46C DNA MER2_type 1 327 -11 361 310 13 7 chr10 6673846 6674001 -138915287 + L1MB3 LINE L1 5657 5812 -309 339 44 0 0 chr10 6674063 6674108 -138915180 + (TA)n Simple_repeat Simple_repeat 2 46 0 246 312 50 28 chr10 6674259 6674400 -138914888 - MIR SINE MIR -50 212 69 359 179 51 13 chr10 6674799 6674877 -138914411 + MER65B LTR ERV1 1 81 -450 317 258 31 0 chr10 6676695 6676792 -138912496 - MIR SINE MIR -62 146 47 195 42 0 0 chr10 6678077 6678101 -138911187 + (TTTA)n Simple_repeat Simple_repeat 2 25 0 1629 105 113 4 chr10 6678104 6678343 -138910945 - AluSx SINE Alu -31 281 17 2834 120 19 1 chr10 6678574 6679048 -138910240 + MER1A DNA MER1_type 1 529 0 542 299 54 50 chr10 6679165 6679463 -138909825 - L3 LINE CR1 -178 1399 1101 4027 191 24 3 chr10 6679508 6680290 -138908998 - L1MB3 LINE L1 -3 6180 5382 421 342 134 23 chr10 6680292 6680768 -138908520 - L3 LINE CR1 -461 1116 588 219 388 109 0 chr10 6680829 6680994 -138908294 - L3 LINE CR1 -1099 478 296 * 228 317 100 22 chr10 6680990 6681220 -138908068 - L3b LINE CR1 -205 1378 1131 234 306 0 0 chr10 6681450 6681512 -138907776 + MIR SINE MIR 86 147 -61 249 33 0 0 chr10 6682671 6682701 -138906587 + (CAAAAA)n Simple_repeat Simple_repeat 3 32 0 2157 110 10 3 chr10 6683922 6684213 -138905075 - AluSg SINE Alu -15 295 3 393 254 49 78 chr10 6684566 6684685 -138904603 - MIR SINE MIR -32 230 118 1772 199 8 18 chr10 6684685 6685026 -138904262 + L1MB3 LINE L1 5795 6133 -50 2136 109 27 3 chr10 6685026 6685320 -138903968 + AluSg SINE Alu 1 301 -9 1772 199 8 18 chr10 6685320 6685370 -138903918 + L1MB3 LINE L1 6133 6182 -1 393 254 49 78 chr10 6685370 6685455 -138903833 - MIR SINE MIR -144 118 32 5976 25 6 0 chr10 6685762 6686452 -138902836 - L1PA3 LINE L1 -1725 4421 3728 8506 21 1 0 chr10 6686452 6688188 -138901100 + L1PA3 LINE L1 4415 6152 -3 471 81 0 0 chr10 6688811 6688873 -138900415 - MADE1 DNA Mariner -1 79 18 3725 172 29 38 chr10 6688879 6688920 -138900368 - L1MB2 LINE L1 -1 6170 6130 2239 98 0 19 chr10 6688920 6689227 -138900061 - AluSx SINE Alu -11 301 1 3725 172 29 38 chr10 6689227 6689577 -138899711 - L1MB2 LINE L1 -41 6130 5778 2021 154 0 0 chr10 6689577 6689869 -138899419 - AluSx SINE Alu -20 292 1 3725 172 29 38 chr10 6689869 6690249 -138899039 - L1MB2 LINE L1 -393 5778 5405 5725 127 4 8 chr10 6690290 6690678 -138898610 - L1PA13 LINE L1 -1 6162 5774 2517 70 3 13 chr10 6690678 6690991 -138898297 - AluY SINE Alu -1 310 1 5725 127 4 8 chr10 6690991 6691500 -138897788 - L1PA13 LINE L1 -389 5774 5263 1772 180 7 10 chr10 6691756 6692062 -138897226 - AluJb SINE Alu -7 305 1 1689 199 119 11 chr10 6692062 6692524 -138896764 - Charlie1b DNA MER1_type -11 512 1 1776 144 0 0 chr10 6692550 6692813 -138896475 + AluJb SINE Alu 48 310 -2 252 284 22 0 chr10 6692857 6692934 -138896354 + CT-rich Low_complexity Low_complexity 3 137 0 303 336 14 14 chr10 6692942 6693085 -138896203 - L1ME LINE L1 -461 5709 5567 386 129 16 0 chr10 6693370 6693432 -138895856 + MIR SINE MIR 81 143 -65 3160 134 87 0 chr10 6694039 6694567 -138894721 + L1PA16 LINE L1 5592 6165 -1 1925 153 3 7 chr10 6695027 6695335 -138893953 + AluSx SINE Alu 5 311 -1 1872 166 0 7 chr10 6695456 6695751 -138893537 + AluJo SINE Alu 14 306 -6 1128 145 128 4 chr10 6695755 6695990 -138893298 + L1MB4 LINE L1 5917 6180 0 202 331 75 23 chr10 6696059 6696192 -138893096 + L2 LINE L2 1278 1417 -1897 2186 110 14 0 chr10 6698663 6698954 -138890334 - AluSx SINE Alu -17 295 1 584 147 10 0 chr10 6699131 6699233 -138890055 - L1MA4A LINE L1 -2 6301 6199 223 290 27 98 chr10 6699235 6699418 -138889870 + L2 LINE L2 3143 3312 -1 2345 98 0 0 chr10 6700053 6700349 -138888939 + AluY SINE Alu 1 296 -15 1806 168 10 7 chr10 6700398 6700695 -138888593 + AluJb SINE Alu 15 312 0 661 268 172 0 chr10 6701990 6702199 -138887089 + MIR SINE MIR 18 262 0 369 232 24 32 chr10 6703026 6703151 -138886137 - L2 LINE L2 -7 3265 3142 517 176 18 115 chr10 6703912 6704077 -138885211 + MLT1F LTR MaLR 388 536 -6 1609 139 78 20 chr10 6707246 6707541 -138881747 + AluSx SINE Alu 1 312 0 21 57 0 0 chr10 6707739 6707774 -138881514 + AT_rich Low_complexity Low_complexity 1 35 0 2347 88 0 3 chr10 6707796 6708093 -138881195 - AluY SINE Alu -15 296 1 349 288 45 45 chr10 6708421 6708553 -138880735 - L2 LINE L2 0 3313 3182 2327 112 0 0 chr10 6709846 6710150 -138879138 - AluSx SINE Alu -8 304 1 1812 163 7 0 chr10 6710824 6711150 -138878138 + AluSx SINE Alu 6 333 0 6049 85 7 7 chr10 6711522 6712335 -138876953 - L1PA10 LINE L1 -4 6164 5352 520 243 132 0 chr10 6712375 6712511 -138876777 + MER112 DNA MER1_type 97 250 -10 1811 146 17 3 chr10 6713130 6713417 -138875871 + AluJb SINE Alu 1 291 -21 462 254 0 9 chr10 6713700 6713814 -138875474 - MER94 DNA DNA -18 116 4 370 243 76 35 chr10 6714266 6714410 -138874878 - L2 LINE L2 -3 3310 3161 3650 192 21 11 chr10 6715007 6715057 -138874231 + L1MB3 LINE L1 5446 5494 -689 2370 98 0 0 chr10 6715057 6715352 -138873936 + AluSc SINE Alu 3 297 -12 3650 192 21 11 chr10 6715352 6716030 -138873258 + L1MB3 LINE L1 5494 6181 -2 507 238 33 50 chr10 6716055 6716236 -138873052 + MIR SINE MIR 14 191 -71 22 0 0 0 chr10 6716344 6716366 -138872922 + AT_rich Low_complexity Low_complexity 1 22 0 195 42 0 0 chr10 6716836 6716860 -138872428 + (CA)n Simple_repeat Simple_repeat 2 25 0 28 0 0 0 chr10 6719475 6719503 -138869785 + GC_rich Low_complexity Low_complexity 1 28 0 22 80 0 0 chr10 6719583 6719633 -138869655 + GC_rich Low_complexity Low_complexity 1 50 0 2075 134 7 0 chr10 6720565 6720857 -138868431 + AluSx SINE Alu 1 294 -18 195 225 0 0 chr10 6721238 6721278 -138868010 + L2 LINE L2 3262 3301 -12 1860 161 0 23 chr10 6721634 6721939 -138867349 - AluJo SINE Alu -14 298 1 453 272 23 46 chr10 6721947 6722120 -138867168 - MIR SINE MIR -55 207 39 2279 92 3 16 chr10 6722158 6722462 -138866826 - AluSx SINE Alu -12 300 1 225 0 0 0 chr10 6723828 6723853 -138865435 + (A)n Simple_repeat Simple_repeat 1 25 0 516 320 39 43 chr10 6724113 6724369 -138864919 - MIR SINE MIR 0 262 8 315 0 0 0 chr10 6725411 6725446 -138863842 + (CA)n Simple_repeat Simple_repeat 2 36 0 28 48 0 0 chr10 6726276 6726318 -138862970 + AT_rich Low_complexity Low_complexity 1 42 0 611 251 49 0 chr10 6726637 6726800 -138862488 - MIR SINE MIR -51 211 41 252 59 0 0 chr10 6726929 6726963 -138862325 + (CA)n Simple_repeat Simple_repeat 1 34 0 229 222 156 0 chr10 6726966 6727056 -138862232 - L1ME4a LINE L1 -56 6065 5962 22 0 0 0 chr10 6727065 6727087 -138862201 + AT_rich Low_complexity Low_complexity 1 22 0 1477 258 107 24 chr10 6728307 6728907 -138860381 + L1ME3A LINE L1 5500 6163 -7 200 252 0 75 chr10 6729216 6729323 -138859965 + CT-rich Low_complexity Low_complexity 1 99 0 2582 122 13 5 chr10 6729781 6730167 -138859121 + L1PB1 LINE L1 5763 6151 0 376 284 20 0 chr10 6731205 6731307 -138857981 + MIR3 SINE MIR 59 162 -46 183 329 0 53 chr10 6733003 6733079 -138856209 + L2 LINE L2 3019 3090 -223 463 276 16 16 chr10 6733155 6733278 -138856010 + L2 LINE L2 3191 3313 0 744 230 45 6 chr10 6733579 6733757 -138855531 - MLT1E2 LTR MaLR 0 626 442 466 299 5 45 chr10 6733967 6734168 -138855120 + L1ME1 LINE L1 5866 6058 -108 207 0 0 0 chr10 6734178 6734201 -138855087 + (TTTA)n Simple_repeat Simple_repeat 1 23 0 1608 132 21 24 chr10 6734223 6734511 -138854777 - L1MA8 LINE L1 -24 6267 5981 424 239 78 25 chr10 6734535 6734655 -138854633 + L1ME2 LINE L1 6045 6178 0 577 189 0 0 chr10 6734747 6734842 -138854446 - L1MB1 LINE L1 -18 6150 6056 326 310 90 19 chr10 6736089 6736244 -138853044 - MIR SINE MIR -73 189 24 3215 155 53 24 chr10 6736648 6737268 -138852020 - L1MA8 LINE L1 -2 6289 5652 1100 182 81 4 chr10 6737849 6738096 -138851192 - L1MA4 LINE L1 -2 6298 6033 1440 127 115 44 chr10 6738096 6738454 -138850834 + MSTA LTR MaLR 1 428 0 225 111 22 0 chr10 6738454 6738499 -138850789 - L1MA4 LINE L1 -263 6037 5992 493 305 69 59 chr10 6738910 6739104 -138850184 - LTR16C LTR ERVL -2 489 289 2204 87 128 42 chr10 6739104 6739439 -138849849 - THE1B LTR MaLR 0 364 1 493 305 69 59 chr10 6739439 6739549 -138849739 - LTR16C LTR ERVL -202 289 182 393 248 16 48 chr10 6739742 6739867 -138849421 - MER117 DNA MER1_type -74 123 3 3717 151 0 6 chr10 6740481 6741010 -138848278 - MER1A DNA MER1_type -1 526 1 216 0 0 0 chr10 6741279 6741303 -138847985 + (TTTA)n Simple_repeat Simple_repeat 3 26 0 400 325 12 30 chr10 6743058 6743227 -138846061 + LTR67 LTR ERVL 389 554 -3 207 0 0 0 chr10 6743542 6743565 -138845723 + (TG)n Simple_repeat Simple_repeat 1 23 0 418 353 22 27 chr10 6743776 6744184 -138845104 + ERVL LTR ERVL 904 1309 -4455 1381 169 98 128 chr10 6744211 6744719 -138844569 - MLT1D LTR MaLR 0 505 13 2446 69 3 0 chr10 6744952 6745255 -138844033 - AluY SINE Alu -7 304 1 245 186 85 0 chr10 6745843 6745902 -138843386 - MIR SINE MIR -2 260 197 2223 88 0 16 chr10 6745902 6746210 -138843078 - AluY SINE Alu -4 307 5 419 265 20 0 chr10 6746448 6746546 -138842742 - MIR SINE MIR -79 129 30 250 324 47 81 chr10 6747715 6748011 -138841277 - L2 LINE L2 -120 3152 2867 200 267 0 33 chr10 6748094 6748154 -138841134 - MIR SINE MIR -35 227 170 785 278 12 0 chr10 6748795 6748968 -138840320 - MER45A DNA AcHobo -1 177 3 220 330 33 0 chr10 6749238 6749329 -138839959 - L3b LINE CR1 -200 1383 1290 476 325 149 44 chr10 6749659 6750114 -138839174 - L2 LINE L2 -3 3310 2808 1236 249 291 29 chr10 6750165 6750795 -138838493 + LTR50 LTR ERVL 1 795 0 470 274 70 35 chr10 6750811 6751012 -138838276 - L2 LINE L2 -843 2471 2264 233 306 51 0 chr10 6751022 6751120 -138838168 - L2 LINE L2 -1223 2091 1989 4670 173 46 20 chr10 6751122 6752490 -138836798 + L1MB8 LINE L1 4768 6176 -2 207 350 81 0 chr10 6752518 6752641 -138836647 - L2 LINE L2 -1317 1997 1865 195 313 31 31 chr10 6752664 6752728 -138836560 - L2 LINE L2 -2048 1266 1203 2222 134 47 33 chr10 6753008 6753367 -138835921 + THE1B LTR MaLR 1 364 0 4782 108 14 47 chr10 6753797 6754540 -138834748 - L1PB1 LINE L1 -2 6149 5432 6749 223 67 103 chr10 6754542 6756036 -138833252 + Charlie6 DNA MER1_type 83 1630 -1870 554 270 0 0 chr10 6756036 6756151 -138833137 + FLAM_A SINE Alu 2 116 -17 2328 60 3 7 chr10 6756152 6756436 -138832852 - L1PA5 LINE L1 -3 6151 5869 1380 138 0 0 chr10 6756441 6756644 -138832644 + AluSg/x SINE Alu 105 307 -5 6749 223 67 103 chr10 6756644 6757470 -138831818 + Charlie6 DNA MER1_type 1634 2521 -979 2663 188 70 4 chr10 6757532 6758047 -138831241 + MER21A LTR ERV1 383 931 0 2371 82 0 3 chr10 6758129 6758432 -138830856 + AluSx SINE Alu 1 302 -10 233 121 0 0 chr10 6758432 6758465 -138830823 - MER41C LTR ERV1 -521 33 1 308 161 118 21 chr10 6758465 6758558 -138830730 - L1PB4 LINE L1 -127 6029 5928 2577 122 0 3 chr10 6758972 6759324 -138829964 - THE1B LTR MaLR 0 364 14 381 143 16 0 chr10 6759312 6759375 -138829913 - THE1B LTR MaLR -300 64 1 * 622 211 44 3 chr10 6760760 6760929 -138828359 - MER69A DNA AcHobo 0 177 4 207 69 0 0 chr10 6760995 6761024 -138828264 + (TG)n Simple_repeat Simple_repeat 1 29 0 1585 192 25 6 chr10 6761078 6761395 -138827893 + MLT1A1 LTR MaLR 1 323 -42 2463 85 66 22 chr10 6761951 6761971 -138827317 + L1PB1 LINE L1 5761 5779 -385 189 0 0 0 chr10 6761971 6761992 -138827296 + (TA)n Simple_repeat Simple_repeat 1 21 0 2463 85 66 22 chr10 6761992 6762359 -138826929 + L1PB1 LINE L1 5779 6164 0 403 151 27 0 chr10 6762796 6762869 -138826419 - MER116 DNA Mariner 0 80 6 1998 118 63 76 chr10 6762889 6763269 -138826019 + THE1C LTR MaLR 1 375 0 2036 158 25 14 chr10 6763844 6764212 -138825076 - L1MB3 LINE L1 -2 6181 5810 2148 144 0 0 chr10 6764266 6764572 -138824716 + AluSx SINE Alu 1 306 -6 348 322 41 0 chr10 6765242 6765363 -138823925 - L2 LINE L2 -1 3271 3146 215 304 55 69 chr10 6766093 6766310 -138822978 - L2 LINE L2 -161 3111 2898 236 234 0 0 chr10 6767093 6767140 -138822148 + L1ME4a LINE L1 5986 6032 -89 1364 252 13 10 chr10 6768854 6769316 -138819972 - MER90 LTR ERV1 -6 569 57 2041 130 0 7 chr10 6769473 6769786 -138819502 + AluSx SINE Alu 1 311 0 2329 164 56 7 chr10 6769952 6770397 -138818891 - L1MA7 LINE L1 0 6291 5825 347 174 138 87 chr10 6770880 6771018 -138818270 - L1ME4a LINE L1 0 6121 5977 200 359 98 0 chr10 6771018 6771110 -138818178 - L2 LINE L2 -8 3264 3164 2053 121 4 0 chr10 6771752 6772051 -138817237 + AluSq SINE Alu 11 313 0 319 196 188 54 chr10 6772909 6773021 -138816267 + MER5A DNA MER1_type 15 141 -48 4147 164 39 1 chr10 6773047 6773743 -138815545 - L1PA16 LINE L1 -9 6157 5436 290 298 18 35 chr10 6774466 6774580 -138814708 - MIR SINE MIR -116 146 35 1055 113 0 7 chr10 6774979 6775130 -138814158 + FRAM SINE Alu 19 168 -8 202 179 104 0 chr10 6775234 6775301 -138813987 - MIR SINE MIR -133 129 56 414 219 75 78 chr10 6775470 6775861 -138813427 + MLT1H LTR MaLR 23 533 -16 184 277 87 103 chr10 6775904 6776088 -138813200 + MIR SINE MIR 49 229 -33 1996 101 25 7 chr10 6777590 6777911 -138811377 + AluSq SINE Alu 1 326 0 401 344 81 18 chr10 6780121 6780342 -138808946 - MIR SINE MIR -2 260 26 1642 167 0 0 chr10 6780402 6780673 -138808615 - AluJo SINE Alu 0 306 36 1273 220 179 27 chr10 6780701 6781114 -138808174 - MER50 LTR ERV1 -19 715 240 281 264 195 0 chr10 6781848 6781935 -138807353 - MER50 LTR ERV1 -614 120 17 257 154 0 0 chr10 6782304 6782343 -138806945 + U2 snRNA snRNA 1 39 -149 465 292 78 5 chr10 6783328 6783520 -138805768 + MIR SINE MIR 47 252 -10 1188 104 12 0 chr10 6783859 6784023 -138805265 + AluSg/x SINE Alu 132 297 -13 2479 144 50 28 chr10 6784217 6784675 -138804613 - L1MB3 LINE L1 0 6183 5716 218 256 39 148 chr10 6785067 6785133 -138804155 - L2 LINE L2 -61 3211 3139 876 179 174 5 chr10 6785133 6785317 -138803971 - MER20 DNA MER1_type 0 219 5 218 256 39 148 chr10 6785317 6785453 -138803835 - L2 LINE L2 -133 3139 3031 3935 174 29 11 chr10 6785594 6785916 -138803372 + MER72 LTR ERV1 9 324 -398 2712 97 14 0 chr10 6785916 6786266 -138803022 + THE1A LTR MaLR 1 355 0 3935 174 29 11 chr10 6786266 6786644 -138802644 + MER72 LTR ERV1 324 721 -1 1870 250 65 55 chr10 6786661 6787349 -138801939 - MER21B LTR ERV1 -109 754 60 383 256 0 0 chr10 6787359 6787437 -138801851 - MER21B LTR ERV1 -765 98 21 498 216 32 64 chr10 6787597 6787722 -138801566 - MER91C DNA MER1_type -19 121 1 2352 91 0 0 chr10 6788170 6788478 -138800810 - AluY SINE Alu -3 308 1 237 285 159 26 chr10 6789970 6790121 -138799167 - MIR SINE MIR -50 212 42 195 139 0 0 chr10 6790538 6790574 -138798714 + (ATG)n Simple_repeat Simple_repeat 3 38 0 246 62 0 0 chr10 6791144 6791176 -138798112 + (TA)n Simple_repeat Simple_repeat 1 32 0 1575 167 15 11 chr10 6791529 6791793 -138797495 - AluJo SINE Alu -47 265 1 318 50 0 0 chr10 6792600 6792640 -138796648 + (CTATT)n Simple_repeat Simple_repeat 4 43 0 1673 160 0 80 chr10 6792646 6792959 -138796329 - AluJo SINE Alu -24 288 1 1811 161 0 55 chr10 6792960 6793290 -138795998 - AluSx SINE Alu 0 312 1 194 362 11 0 chr10 6793495 6793589 -138795699 + MIR SINE MIR 6 100 -162 682 259 93 22 chr10 6793839 6794117 -138795171 - L1M4 LINE L1 -2147 3999 3702 1739 132 19 75 chr10 6794456 6794584 -138794704 + AluJb SINE Alu 1 135 -177 2293 54 4 0 chr10 6794584 6794862 -138794426 + AluY SINE Alu 1 279 -32 1739 132 19 75 chr10 6794862 6795051 -138794237 + AluJb SINE Alu 135 300 -12 269 218 119 50 chr10 6795343 6795444 -138793844 + MIR SINE MIR 72 179 -83 22 35 0 0 chr10 6795631 6795660 -138793628 + AT_rich Low_complexity Low_complexity 1 29 0 959 90 0 7 chr10 6795669 6795814 -138793474 + (TCTA)n Simple_repeat Simple_repeat 1 144 0 242 36 0 0 chr10 6795827 6795855 -138793433 + (A)n Simple_repeat Simple_repeat 1 28 0 235 198 28 38 chr10 6798717 6798823 -138790465 + GA-rich Low_complexity Low_complexity 4 108 0 2422 81 0 0 chr10 6798985 6799282 -138790006 - AluSg SINE Alu -13 297 1 1178 87 6 0 chr10 6799990 6800163 -138789125 + (GGAGA)n Simple_repeat Simple_repeat 2 175 0 22 0 0 0 chr10 6800472 6800494 -138788794 + AT_rich Low_complexity Low_complexity 1 22 0 548 208 87 11 chr10 6800550 6800740 -138788548 + L1ME LINE L1 1357 1671 -4755 2733 232 58 8 chr10 6800748 6801901 -138787387 + L1ME LINE L1 4843 6052 -392 204 97 0 0 chr10 6802121 6802152 -138787136 + (T)n Simple_repeat Simple_repeat 1 31 0 216 0 0 0 chr10 6802929 6802953 -138786335 + (TG)n Simple_repeat Simple_repeat 1 24 0 1078 246 54 81 chr10 6804482 6805015 -138784273 - MER34 LTR ERV1 -23 519 1 1500 218 89 17 chr10 6806331 6806679 -138782609 + MLT1A2 LTR MaLR 1 373 -1 882 207 0 17 chr10 6806711 6806885 -138782403 + FRAM SINE Alu 1 170 -6 911 150 0 0 chr10 6807253 6807373 -138781915 + AluSq/x SINE Alu 1 123 -189 243 0 0 0 chr10 6807373 6807400 -138781888 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 911 150 0 0 chr10 6807400 6807412 -138781876 + AluSq/x SINE Alu 122 133 -179 1939 150 31 0 chr10 6807897 6808191 -138781097 - AluSx SINE Alu -9 303 1 623 225 0 47 chr10 6808219 6808348 -138780940 - FLAM_A SINE Alu -10 123 1 40 37 0 0 chr10 6808938 6808992 -138780296 + AT_rich Low_complexity Low_complexity 1 54 0 2458 54 0 7 chr10 6809107 6809403 -138779885 - AluY SINE Alu -17 294 1 187 349 58 41 chr10 6809446 6809618 -138779670 - MIR SINE MIR -56 206 32 339 345 22 36 chr10 6809647 6809786 -138779502 + MIR SINE MIR 5 141 -121 1971 208 84 2 chr10 6809838 6810280 -138779008 - MER70B LTR ERVL -100 478 1 222 203 47 47 chr10 6811433 6811497 -138777791 + MIR SINE MIR 199 262 0 1555 218 49 16 chr10 6812541 6812908 -138776380 - MLT1B LTR MaLR 0 390 12 414 267 75 43 chr10 6812913 6813081 -138776207 + MLT1I LTR MaLR 14 190 -219 2087 127 73 17 chr10 6813081 6813436 -138775852 + THE1C LTR MaLR 1 375 0 414 267 75 43 chr10 6813436 6813454 -138775834 + MLT1I LTR MaLR 190 206 -203 2171 96 0 17 chr10 6813470 6813761 -138775527 + AluSx SINE Alu 1 286 -26 318 26 0 0 chr10 6813764 6813803 -138775485 + (CAAA)n Simple_repeat Simple_repeat 2 40 0 232 241 84 0 chr10 6813858 6813941 -138775347 + LTR66 LTR ERVL 352 441 -169 808 95 9 0 chr10 6813991 6814096 -138775192 - AluSg/x SINE Alu -17 295 190 225 323 0 0 chr10 6814354 6814416 -138774872 - MIR3 SINE MIR -28 180 119 7624 54 2 5 chr10 6815353 6816499 -138772789 - L1PA5 LINE L1 0 6154 5008 838 258 116 7 chr10 6816619 6816894 -138772394 + MLT1E3 LTR MaLR 317 621 -3 1011 265 75 131 chr10 6816896 6817821 -138771467 - Charlie2b DNA MER1_type -1865 917 45 3585 67 5 7 chr10 6818505 6818954 -138770334 + LTR7 LTR ERV1 1 448 -2 11206 87 18 39 chr10 6818956 6821287 -138768001 + HERVH LTR ERV1 1 2161 -5552 622 60 66 18 chr10 6822082 6822249 -138767039 + (TA)n Simple_repeat Simple_repeat 2 176 0 632 222 146 0 chr10 6823054 6823225 -138766063 + MER3 DNA MER1_type 14 209 0 382 318 117 25 chr10 6824649 6824888 -138764400 + MIR SINE MIR 1 261 -1 959 178 6 6 chr10 6824946 6825126 -138764162 - L1MA9 LINE L1 0 6312 6133 375 123 14 0 chr10 6825133 6825206 -138764082 + L1MDa LINE L1 1258 1331 -5209 309 214 17 79 chr10 6825190 6825309 -138763979 + L1 LINE L1 4262 4375 -1771 * 273 77 0 0 chr10 6827051 6827090 -138762198 + AluSc SINE Alu 255 293 -6 256 241 84 36 chr10 6827083 6827166 -138762122 + Charlie6 DNA MER1_type 3035 3121 -379 * 2194 88 7 0 chr10 6827424 6827698 -138761590 - AluSg SINE Alu -11 299 24 189 281 41 77 chr10 6828167 6828363 -138760925 - L2 LINE L2 -2178 1136 948 1544 189 49 11 chr10 6828778 6829128 -138760160 + MER110A LTR ERV1 55 417 -51 474 277 113 39 chr10 6829207 6829438 -138759850 - MIR SINE MIR -8 254 7 287 260 0 0 chr10 6830405 6830478 -138758810 - MLT1L LTR MaLR -4 611 539 3201 142 41 42 chr10 6830735 6831347 -138757941 - LTR36 LTR ERV1 0 611 1 474 143 65 0 chr10 6831354 6831431 -138757857 + MER31B LTR ERV1 1 82 -384 342 319 43 7 chr10 6831506 6831644 -138757644 - MER87 LTR ERV1 0 541 399 1925 186 44 42 chr10 6831953 6832382 -138756906 + MER67A LTR ERV1 101 530 -13 898 212 103 75 chr10 6832485 6832821 -138756467 - LTR35 LTR ERV1 0 679 188 1320 233 94 8 chr10 6833478 6833860 -138755428 - MER90 LTR ERV1 -2 612 198 35 0 0 0 chr10 6833864 6833899 -138755389 + AT_rich Low_complexity Low_complexity 1 35 0 406 277 18 24 chr10 6833965 6834131 -138755157 - MER90 LTR ERV1 -407 168 4 408 274 49 60 chr10 6834252 6834537 -138754751 - L2 LINE L2 0 3313 3032 2207 125 0 0 chr10 6835024 6835311 -138753977 - AluSx SINE Alu -22 290 4 255 254 0 0 chr10 6835899 6835962 -138753326 - L3 LINE CR1 -124 1453 1391 279 191 0 0 chr10 6835962 6836030 -138753258 + (TG)n Simple_repeat Simple_repeat 1 68 0 2217 135 0 0 chr10 6836201 6836513 -138752775 - AluSx SINE Alu 0 312 1 459 0 0 0 chr10 6836635 6836686 -138752602 + (TA)n Simple_repeat Simple_repeat 1 51 0 211 287 82 25 chr10 6836938 6837060 -138752228 + MIR SINE MIR 134 262 0 3614 49 0 7 chr10 6837541 6837992 -138751296 - LTR7 LTR ERV1 -2 448 1 2564 76 45 13 chr10 6837992 6838372 -138750916 - HERVH LTR ERV1 0 7713 7322 1454 125 19 0 chr10 6838370 6838586 -138750702 - HERVH LTR ERV1 -1894 5819 5600 * 4409 143 1 1 chr10 6838587 6839249 -138750039 - HERVH LTR ERV1 -2564 5149 4488 3303 117 8 10 chr10 6839251 6839754 -138749534 - HERVH LTR ERV1 -3720 3993 3492 948 133 7 0 chr10 6839744 6839894 -138749394 - HERVH LTR ERV1 -4423 3290 3140 * 5360 90 0 18 chr10 6839873 6840642 -138748646 - HERVH LTR ERV1 -4718 2995 2241 370 252 52 0 chr10 6840962 6841077 -138748211 + L1MA1 LINE L1 5817 5937 -365 * 955 51 0 0 chr10 6840995 6841112 -138748176 + L1PB1 LINE L1 5856 5972 -179 6769 59 15 27 chr10 6841114 6841809 -138747479 + L1PA6 LINE L1 4774 5476 -678 2220 115 0 3 chr10 6841809 6842113 -138747175 + AluY SINE Alu 1 303 -8 6769 59 15 27 chr10 6842113 6842430 -138746858 + L1PA6 LINE L1 5476 5795 -359 2377 89 0 22 chr10 6842430 6842746 -138746542 + AluY SINE Alu 1 309 -2 6769 59 15 27 chr10 6842746 6843123 -138746165 + L1PA6 LINE L1 5795 6153 -1 297 239 44 44 chr10 6843430 6843543 -138745745 - MER103 DNA DNA -13 153 41 267 156 0 0 chr10 6843806 6843851 -138745437 + L1ME2 LINE L1 6015 6059 -105 384 274 0 9 chr10 6843888 6843994 -138745294 + L1ME2 LINE L1 6041 6145 -19 217 416 9 0 chr10 6844037 6844150 -138745138 - MIR SINE MIR -68 140 27 2374 87 3 3 chr10 6845195 6845504 -138743784 + AluSg SINE Alu 1 309 -1 1170 112 0 0 chr10 6845819 6845841 -138743447 + (TTCC)n Simple_repeat Simple_repeat 1 200 0 1170 112 0 0 chr10 6845841 6846019 -138743269 + (TTCC)n Simple_repeat Simple_repeat 1 178 0 450 217 19 0 chr10 6846369 6846475 -138742813 - MLT2D LTR ERVL -274 140 33 198 71 0 0 chr10 6846767 6846795 -138742493 + (T)n Simple_repeat Simple_repeat 1 28 0 2685 94 11 5 chr10 6847852 6848225 -138741063 - THE1C LTR MaLR 0 375 1 356 318 155 0 chr10 6848339 6848487 -138740801 - MER5A DNA MER1_type -6 183 13 243 327 158 0 chr10 6848775 6848940 -138740348 - MIR3 SINE MIR -6 202 12 2115 273 73 28 chr10 6849634 6850410 -138738878 + MER63C DNA MER1_type 1 811 -119 575 286 12 30 chr10 6851323 6851491 -138737797 + MLT1F LTR MaLR 3 167 -375 288 255 0 106 chr10 6851584 6851678 -138737610 + MLT1F1 LTR MaLR 155 238 -329 858 225 68 9 chr10 6851713 6851935 -138737353 + MLT1F1 LTR MaLR 331 565 -2 2173 154 25 57 chr10 6852158 6852179 -138737109 - MLT1B LTR MaLR 0 390 370 2469 178 24 0 chr10 6852179 6852595 -138736693 + MSTB LTR MaLR 1 426 0 2173 154 25 57 chr10 6852595 6852976 -138736312 - MLT1B LTR MaLR -20 370 1 263 307 22 16 chr10 6853782 6853902 -138735386 - MIR SINE MIR -65 143 41 235 306 10 31 chr10 6854194 6854292 -138734996 - MIR3 SINE MIR -9 199 104 246 128 0 0 chr10 6854755 6854794 -138734494 + (TTC)n Simple_repeat Simple_repeat 2 40 0 1872 132 0 0 chr10 6854796 6855047 -138734241 - AluSx SINE Alu -61 251 1 1067 60 13 40 chr10 6855856 6856005 -138733283 - L1PA11 LINE L1 -3 6171 6027 225 0 0 0 chr10 6856013 6856038 -138733250 + (TTTTA)n Simple_repeat Simple_repeat 2 26 0 2003 138 0 0 chr10 6856040 6856323 -138732965 - AluSq SINE Alu -30 283 1 384 40 0 0 chr10 6857511 6857561 -138731727 + (TG)n Simple_repeat Simple_repeat 2 51 0 762 231 129 0 chr10 6858348 6858534 -138730754 + MER58A DNA MER1_type 4 213 -11 1766 163 3 33 chr10 6858748 6859048 -138730240 - AluSx SINE Alu -17 295 5 3092 182 63 6 chr10 6859140 6859771 -138729517 - LTR65 LTR ERV1 0 669 3 855 119 0 22 chr10 6860236 6860370 -138728918 - L1PB4 LINE L1 0 6156 6026 3035 158 37 27 chr10 6860370 6860932 -138728356 - MER41B LTR ERV1 0 635 68 262 280 206 0 chr10 6861554 6861661 -138727627 + MIR SINE MIR 70 198 -64 253 262 12 0 chr10 6862574 6862658 -138726630 + (CAGAGA)n Simple_repeat Simple_repeat 3 87 0 2297 114 22 30 chr10 6862667 6863034 -138726254 - THE1B LTR MaLR 0 364 1 377 286 36 56 chr10 6864181 6864377 -138724911 + MIR3 SINE MIR 17 208 0 1864 153 7 4 chr10 6864922 6865203 -138724085 + AluJb SINE Alu 1 282 -30 194 0 39 0 chr10 6865206 6865232 -138724056 + (CAAAA)n Simple_repeat Simple_repeat 2 28 0 297 183 0 32 chr10 6865283 6865376 -138723912 + CT-rich Low_complexity Low_complexity 2 91 0 287 188 0 0 chr10 6865935 6865983 -138723305 - MLT2B1 LTR ERVL 0 520 473 428 250 0 7 chr10 6865983 6866123 -138723165 + (TG)n Simple_repeat Simple_repeat 1 139 0 1022 212 81 79 chr10 6866123 6866551 -138722737 - MLT2B1 LTR ERVL -41 410 1 24 32 0 0 chr10 6867543 6867574 -138721714 + AT_rich Low_complexity Low_complexity 1 31 0 2458 101 3 0 chr10 6868219 6868556 -138720732 - L1PB1 LINE L1 -4 6147 5810 3968 172 79 24 chr10 6869124 6869907 -138719381 - LTR1B LTR ERV1 0 826 1 237 277 107 27 chr10 6870084 6870196 -138719092 + MIR3 SINE MIR 67 187 -21 555 268 30 25 chr10 6871110 6871308 -138717980 - MIR SINE MIR -55 207 9 4446 158 94 0 chr10 6872537 6873292 -138715996 + LTR1B LTR ERV1 1 826 0 272 280 0 59 chr10 6873424 6873542 -138715746 + L2 LINE L2 3103 3213 -100 276 320 59 39 chr10 6873781 6874037 -138715251 + L1ME LINE L1 5556 5816 -305 363 233 15 79 chr10 6874257 6874408 -138714880 + MIR SINE MIR 51 192 -63 245 328 82 34 chr10 6875980 6876170 -138713118 + L2 LINE L2 3029 3273 -40 251 262 163 73 chr10 6876280 6876513 -138712775 + MLT1H LTR MaLR 97 350 -199 236 200 57 43 chr10 6876527 6876597 -138712691 + MLT1I LTR MaLR 316 386 -23 731 178 3 0 chr10 6876964 6877320 -138711968 + (TG)n Simple_repeat Simple_repeat 1 357 0 390 293 29 32 chr10 6878864 6879103 -138710185 + L1ME4a LINE L1 5668 5904 -217 1556 152 10 37 chr10 6879180 6879476 -138709812 - AluJo SINE Alu -22 290 3 34 24 0 0 chr10 6879654 6879695 -138709593 + AT_rich Low_complexity Low_complexity 1 41 0 2412 67 0 29 chr10 6880008 6880324 -138708964 + AluY SINE Alu 1 307 -4 21 36 0 0 chr10 6880464 6880492 -138708796 + AT_rich Low_complexity Low_complexity 1 28 0 2296 113 3 0 chr10 6881143 6881454 -138707834 + AluSx SINE Alu 1 312 0 1791 219 40 80 chr10 6881775 6882379 -138706909 + MLT1G LTR MaLR 11 590 0 2011 194 90 12 chr10 6883535 6883717 -138705571 + MLT1C LTR MaLR 2 168 -299 261 0 0 0 chr10 6883717 6883746 -138705542 + (CA)n Simple_repeat Simple_repeat 1 29 0 2011 194 90 12 chr10 6883746 6883995 -138705293 + MLT1C LTR MaLR 168 467 0 1610 97 60 0 chr10 6884346 6884563 -138704725 + MER30 DNA MER1_type 1 230 0 468 102 45 0 chr10 6884821 6884909 -138704379 + CT-rich Low_complexity Low_complexity 4 95 0 1248 66 0 16 chr10 6884909 6885092 -138704196 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1993 123 20 3 chr10 6885108 6885400 -138703888 - AluSx SINE Alu -15 297 1 252 59 0 0 chr10 6886548 6886582 -138702706 + (TTCA)n Simple_repeat Simple_repeat 3 36 0 319 303 73 0 chr10 6886583 6886692 -138702596 - L2 LINE L2 -15 3298 3182 406 321 75 0 chr10 6887953 6888087 -138701201 + L2 LINE L2 3129 3272 0 2167 123 7 0 chr10 6888916 6889225 -138700063 - AluSx SINE Alu 0 312 2 2294 176 31 12 chr10 6889467 6889892 -138699396 - MSTB2 LTR MaLR 0 457 25 917 126 6 27 chr10 6890436 6890619 -138698669 + (GGAA)n Simple_repeat Simple_repeat 1 179 0 425 133 19 29 chr10 6890628 6890733 -138698555 + GA-rich Low_complexity Low_complexity 2 105 0 252 184 0 0 chr10 6890877 6890926 -138698362 + GA-rich Low_complexity Low_complexity 4 52 0 196 275 121 33 chr10 6890963 6891054 -138698234 + L2 LINE L2 3171 3269 -3 2028 152 44 46 chr10 6891292 6891842 -138697446 + MLT2A2 LTR ERVL 1 554 0 234 0 0 0 chr10 6892828 6892854 -138696434 + (A)n Simple_repeat Simple_repeat 1 26 0 1454 40 10 25 chr10 6893124 6893326 -138695962 + HERVH LTR ERV1 7515 7713 0 3762 49 0 7 chr10 6893326 6893777 -138695511 + LTR7 LTR ERV1 1 448 -2 2792 184 59 0 chr10 6894291 6894817 -138694471 - MER74A LTR ERVL -1 557 1 303 96 0 0 chr10 6895303 6895355 -138693933 + (TTGG)n Simple_repeat Simple_repeat 4 55 0 1284 77 0 12 chr10 6895356 6895524 -138693764 - L1PA14 LINE L1 -4 6157 5992 247 200 0 57 chr10 6895524 6895594 -138693694 + C-rich Low_complexity Low_complexity 6 71 0 344 180 0 72 chr10 6895600 6895794 -138693494 + CT-rich Low_complexity Low_complexity 1 180 0 426 287 36 24 chr10 6896208 6896375 -138692913 + MER117 DNA MER1_type 22 190 -7 337 245 6 107 chr10 6896533 6896692 -138692596 + L1ME2 LINE L1 5577 5719 -402 1080 201 22 45 chr10 6896745 6896969 -138692319 - MER20 DNA MER1_type 0 219 1 2530 261 54 30 chr10 6897456 6898258 -138691030 - L1MEc LINE L1 -5554 842 22 248 161 35 11 chr10 6898445 6898532 -138690756 + (CATATA)n Simple_repeat Simple_repeat 5 93 0 1942 113 46 0 chr10 6898822 6899105 -138690183 - AluSx SINE Alu -16 296 1 2003 31 18 0 chr10 6899586 6899813 -138689475 - L1PA3 LINE L1 0 6155 5925 518 214 11 11 chr10 6899935 6900113 -138689175 + (CA)n Simple_repeat Simple_repeat 1 178 0 298 209 18 42 chr10 6900126 6900412 -138688876 + (CA)n Simple_repeat Simple_repeat 1 279 0 1366 215 80 43 chr10 6901168 6901605 -138687683 + L1ME2 LINE L1 5698 6150 -14 574 221 124 0 chr10 6902092 6902237 -138687051 - MIR SINE MIR -42 220 58 451 290 45 0 chr10 6902341 6902496 -138686792 - MIR3 SINE MIR -31 177 16 25 31 0 0 chr10 6902501 6902533 -138686755 + AT_rich Low_complexity Low_complexity 1 32 0 305 302 54 23 chr10 6902593 6902722 -138686566 - L3b LINE CR1 -6 1577 1445 1161 260 65 48 chr10 6904354 6905015 -138684273 + L1ME4a LINE L1 4037 4708 -1438 206 309 0 59 chr10 6905133 6905201 -138684087 + L2 LINE L2 3202 3265 -7 291 268 28 0 chr10 6906023 6906094 -138683194 - MLT1J LTR MaLR -335 176 104 268 166 102 25 chr10 6906430 6906549 -138682739 + L1ME4a LINE L1 5264 5392 -754 465 19 0 0 chr10 6907395 6907449 -138681839 + (CA)n Simple_repeat Simple_repeat 2 55 0 631 219 7 15 chr10 6907540 6907677 -138681611 - Charlie4 DNA MER1_type -2 1959 1824 227 79 26 0 chr10 6907903 6907941 -138681347 + (TC)n Simple_repeat Simple_repeat 1 39 0 559 256 50 33 chr10 6908062 6908304 -138680984 + L1ME4a LINE L1 5671 5916 -205 993 150 0 0 chr10 6909219 6909372 -138679916 + L1PA14 LINE L1 5819 5971 -190 1093 114 0 0 chr10 6909472 6909639 -138679649 - HERVH LTR ERV1 -1947 5766 5600 4331 143 9 1 chr10 6909640 6910297 -138678991 - HERVH LTR ERV1 -2564 5149 4488 3224 130 0 12 chr10 6910299 6910799 -138678489 - HERVH LTR ERV1 -3720 3993 3500 * 19440 101 59 57 chr10 6910798 6914080 -138675208 - HERVH LTR ERV1 -4423 3290 1 3724 58 0 7 chr10 6914082 6914533 -138674755 - LTR7 LTR ERV1 -2 448 1 267 299 154 0 chr10 6914553 6914670 -138674618 - L2 LINE L2 0 3313 3179 233 323 42 31 chr10 6915200 6915296 -138673992 - MIR3 SINE MIR -27 181 85 44711 44 2 2 chr10 6915723 6921881 -138667407 - L1PA3 LINE L1 0 6155 1 391 326 176 19 chr10 6922317 6922676 -138666612 + L2 LINE L2 2197 2611 -703 213 39 0 0 chr10 6923742 6923768 -138665520 + (TTTTC)n Simple_repeat Simple_repeat 3 28 0 1814 167 3 19 chr10 6923787 6924104 -138665184 - AluJb SINE Alu 0 312 1 183 279 0 33 chr10 6924229 6924290 -138664998 + L2 LINE L2 3210 3268 -4 21 71 0 0 chr10 6925771 6925813 -138663475 + AT_rich Low_complexity Low_complexity 1 42 0 187 245 0 128 chr10 6925968 6926070 -138663218 - MIR SINE MIR -50 212 124 378 302 47 9 chr10 6926433 6926581 -138662707 + MIR SINE MIR 8 161 -47 206 276 351 0 chr10 6927344 6927478 -138661810 + MER5A DNA MER1_type 9 189 0 2307 115 3 0 chr10 6928120 6928507 -138660781 - AluSq SINE Alu 0 388 1 360 286 71 33 chr10 6928672 6928854 -138660434 + MIR SINE MIR 20 208 -54 2057 149 0 0 chr10 6929024 6929326 -138659962 - AluSx SINE Alu -10 302 1 315 269 59 0 chr10 6930492 6930611 -138658677 - MER76 LTR ERV 0 688 563 456 216 98 26 chr10 6931102 6931296 -138657992 - MER76 LTR ERV -102 586 379 303 213 13 27 chr10 6932358 6932433 -138656855 - MER45A DNA AcHobo 0 178 105 2118 135 3 0 chr10 6932438 6932742 -138656546 + AluSx SINE Alu 1 305 -7 998 204 129 8 chr10 6932761 6933001 -138656287 + AluJo SINE Alu 13 281 -31 424 216 137 0 chr10 6933011 6933113 -138656175 - MER45A DNA AcHobo -61 117 2 1070 157 5 14 chr10 6933751 6933967 -138655321 + L1MA4 LINE L1 6084 6297 -3 2185 98 32 0 chr10 6934402 6934687 -138654601 + AluSq SINE Alu 5 298 -15 507 155 83 0 chr10 6934697 6934781 -138654507 + AluJ/FLAM SINE Alu 1 91 -221 396 281 70 41 chr10 6934975 6935146 -138654142 + L2 LINE L2 3096 3271 -1 24 0 0 0 chr10 6935332 6935356 -138653932 + AT_rich Low_complexity Low_complexity 1 24 0 198 304 0 14 chr10 6935664 6935733 -138653555 + MIR SINE MIR 100 167 -95 7977 67 3 2 chr10 6935756 6936724 -138652564 - LTR5 LTR ERVK 0 969 1 434 63 11 168 chr10 6936724 6936819 -138652469 - SVA Other Other -450 936 857 12928 49 1 0 chr10 6936819 6938479 -138650809 - HERVK LTR ERVK -95 7148 5533 43625 43 4 3 chr10 6938724 6944251 -138645037 - HERVK LTR ERVK -1710 5533 1 7892 78 2 1 chr10 6944251 6945219 -138644069 - LTR5 LTR ERVK 0 969 1 340 125 113 12 chr10 6945603 6945683 -138643605 - MER112 DNA MER1_type -36 224 137 225 338 73 22 chr10 6945945 6946081 -138643207 + MIR SINE MIR 66 208 -54 180 0 0 0 chr10 6946116 6946136 -138643152 + (TG)n Simple_repeat Simple_repeat 1 20 0 258 195 47 47 chr10 6946354 6946523 -138642765 + (TA)n Simple_repeat Simple_repeat 2 170 0 * 564 279 0 0 chr10 6946518 6946697 -138642591 + (CATATA)n Simple_repeat Simple_repeat 2 180 0 543 283 0 0 chr10 6946669 6946849 -138642439 + (TA)n Simple_repeat Simple_repeat 1 180 0 * 279 268 0 0 chr10 6946867 6947046 -138642242 + (TA)n Simple_repeat Simple_repeat 1 179 0 466 174 48 0 chr10 6947113 6947280 -138642008 + (TA)n Simple_repeat Simple_repeat 1 175 0 257 209 44 0 chr10 6947296 6947454 -138641834 + (TA)n Simple_repeat Simple_repeat 1 165 0 415 189 28 33 chr10 6947474 6947654 -138641634 + (TA)n Simple_repeat Simple_repeat 1 179 0 471 193 17 28 chr10 6947679 6947860 -138641428 + (TA)n Simple_repeat Simple_repeat 2 180 0 249 222 22 22 chr10 6947875 6947965 -138641323 + L1MC4 LINE L1 6614 6703 -1339 664 231 17 6 chr10 6947976 6948334 -138640954 + (TA)n Simple_repeat Simple_repeat 1 362 0 374 188 44 0 chr10 6948404 6948564 -138640724 + (TA)n Simple_repeat Simple_repeat 2 168 0 564 214 0 0 chr10 6948579 6948757 -138640531 + (TA)n Simple_repeat Simple_repeat 2 179 0 312 284 0 0 chr10 6948759 6948847 -138640441 + L1MC4 LINE L1 6616 6703 -1339 239 381 102 0 chr10 6949573 6949691 -138639597 - L2 LINE L2 -5 3267 3138 242 275 0 12 chr10 6950703 6950783 -138638505 - L1M4 LINE L1 -1537 4609 4531 256 281 216 45 chr10 6950820 6951019 -138638269 + L2 LINE L2 3080 3312 -1 213 366 11 21 chr10 6952373 6952466 -138636822 + MIR SINE MIR 30 121 -87 2231 118 170 5 chr10 6953633 6954050 -138635238 + LTR19A LTR ERV1 1 486 0 384 313 154 5 chr10 6954222 6954436 -138634852 - MIR SINE MIR -2 260 15 200 320 26 13 chr10 6955411 6955489 -138633799 - MIR3 SINE MIR -23 185 107 1542 101 38 0 chr10 6956250 6956459 -138632829 + AluSq SINE Alu 91 307 -6 3577 216 102 49 chr10 6956477 6957425 -138631863 + Charlie1a DNA MER1_type 56 1097 -1664 1049 23 78 0 chr10 6957425 6957554 -138631734 + MER85 DNA T2_type 1 139 0 3577 216 102 49 chr10 6957554 6957934 -138631354 + Charlie1a DNA MER1_type 1097 1455 0 677 272 27 13 chr10 6957962 6958186 -138631102 + L2 LINE L2 3085 3311 -2 225 303 137 63 chr10 6958622 6958797 -138630491 + L3 LINE CR1 879 1066 -511 338 330 140 28 chr10 6958822 6959143 -138630145 + L3 LINE CR1 1171 1527 -50 2159 96 11 0 chr10 6959283 6959564 -138629724 - AluSp SINE Alu -29 284 1 2071 158 3 0 chr10 6959931 6960241 -138629047 - AluJb SINE Alu -1 311 1 1943 240 58 24 chr10 6960521 6961262 -138628026 + L1M4 LINE L1 4310 5075 -1071 296 230 118 31 chr10 6961320 6961484 -138627804 + L1MDa LINE L1 1798 1992 -909 370 226 9 0 chr10 6961487 6961593 -138627695 + L1M4 LINE L1 5106 5212 -934 1174 186 79 28 chr10 6961594 6961847 -138627441 - AluJo SINE Alu -46 266 1 689 88 18 9 chr10 6961849 6961962 -138627326 + Tigger3(Golem) DNA MER2_type 2767 2880 -149 22 0 0 0 chr10 6962343 6962365 -138626923 + AT_rich Low_complexity Low_complexity 1 22 0 231 200 27 13 chr10 6962844 6962919 -138626369 - L1ME4a LINE L1 -2 6119 6044 1871 129 14 0 chr10 6963526 6963806 -138625482 + AluSx SINE Alu 1 284 -28 252 0 0 0 chr10 6963806 6963834 -138625454 + (TA)n Simple_repeat Simple_repeat 2 29 0 364 259 49 63 chr10 6964664 6964807 -138624481 - MIR SINE MIR -55 207 67 2134 118 7 0 chr10 6964961 6965257 -138624031 + AluSq SINE Alu 1 298 -15 283 200 124 0 chr10 6965357 6965462 -138623826 - L1ME4a LINE L1 -44 6077 5960 1973 165 14 6 chr10 6965580 6965943 -138623345 - L1MB1 LINE L1 -4 6164 5799 432 0 0 0 chr10 6965943 6965991 -138623297 + (CA)n Simple_repeat Simple_repeat 1 48 0 2143 168 8 26 chr10 6965995 6966647 -138622641 - L1MB1 LINE L1 -503 5665 5025 525 307 4 12 chr10 6966651 6966895 -138622393 - L1ME4a LINE L1 -297 5824 5583 262 259 17 0 chr10 6967923 6967981 -138621307 - MER91A DNA MER1_type -106 90 32 205 259 94 24 chr10 6968006 6968091 -138621197 + MIR SINE MIR 1 91 -171 221 311 30 52 chr10 6968144 6968279 -138621009 + L3 LINE CR1 1298 1429 -148 354 91 0 0 chr10 6968678 6968733 -138620555 + (TG)n Simple_repeat Simple_repeat 2 56 0 229 308 13 26 chr10 6969483 6969561 -138619727 + MIR3 SINE MIR 84 160 -48 189 0 0 0 chr10 6969628 6969649 -138619639 + (TTA)n Simple_repeat Simple_repeat 2 22 0 978 25 0 17 chr10 6969681 6969801 -138619487 - L1PA3 LINE L1 -1 6154 6037 22070 27 0 0 chr10 6969801 6973174 -138616114 + L1PA2 LINE L1 2643 6057 -98 2980 204 55 48 chr10 6973198 6974147 -138615141 - L1MC3 LINE L1 -7 7778 6824 699 202 165 77 chr10 6974395 6974850 -138614438 - MER66A LTR ERV1 -52 435 100 583 215 0 0 chr10 6975324 6975431 -138613857 - MER5A DNA MER1_type -82 107 1 306 363 108 20 chr10 6975918 6976122 -138613166 - L2 LINE L2 -1 3271 3050 2364 109 3 0 chr10 6976212 6976524 -138612764 - AluSq SINE Alu 0 313 1 184 146 21 21 chr10 6977706 6977754 -138611534 + CT-rich Low_complexity Low_complexity 3 50 0 1072 110 0 11 chr10 6977992 6978174 -138611114 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 303 175 0 0 chr10 6978178 6978235 -138611053 + CT-rich Low_complexity Low_complexity 2 58 0 298 332 133 13 chr10 6980422 6980732 -138608556 + L2 LINE L2 2798 3233 -39 2205 144 67 22 chr10 6980754 6981133 -138608155 + L1MB3 LINE L1 5739 6140 -43 2274 89 0 30 chr10 6981133 6981435 -138607853 + AluSx SINE Alu 1 293 -19 2205 144 67 22 chr10 6981435 6981472 -138607816 + L1MB3 LINE L1 6140 6174 -9 256 276 149 11 chr10 6982131 6982218 -138607070 - L2 LINE L2 -10 3262 3164 1891 115 0 14 chr10 6982616 6982895 -138606393 - AluSx SINE Alu 0 312 38 2482 138 53 19 chr10 6983280 6983693 -138605595 - MSTA LTR MaLR 0 428 2 354 237 30 46 chr10 6983948 6984079 -138605209 - MLT1K LTR MaLR -14 574 446 243 259 24 47 chr10 6984172 6984257 -138605031 - MLT1K LTR MaLR -341 247 165 187 290 43 29 chr10 6984709 6984778 -138604510 + L2 LINE L2 2970 3039 -274 364 289 79 9 chr10 6985079 6985193 -138604095 + L2 LINE L2 3192 3313 0 2076 101 17 10 chr10 6985215 6985512 -138603776 - AluSx SINE Alu -13 299 1 330 26 0 0 chr10 6986235 6986274 -138603014 + (CA)n Simple_repeat Simple_repeat 2 40 0 243 297 27 27 chr10 6986359 6986470 -138602818 - MIR SINE MIR -92 170 60 1718 164 25 0 chr10 6987383 6987663 -138601625 + AluJo SINE Alu 1 287 -25 276 53 0 0 chr10 6987665 6987703 -138601585 + (TC)n Simple_repeat Simple_repeat 1 38 0 1384 284 34 27 chr10 6987716 6988308 -138600980 - MER74B LTR ERVL -14 608 13 267 284 136 52 chr10 6989596 6989751 -138599537 - MIR3 SINE MIR -21 187 20 2182 124 7 0 chr10 6990328 6990635 -138598653 + AluSg SINE Alu 1 309 -1 345 261 0 0 chr10 6991257 6991345 -138597943 - L2 LINE L2 -1 3312 3225 1758 159 24 7 chr10 6992116 6992406 -138596882 - AluJb SINE Alu -17 295 1 208 336 133 9 chr10 6992704 6992817 -138596471 + MIR SINE MIR 26 152 -110 2093 100 24 0 chr10 6993488 6993777 -138595511 + AluY SINE Alu 1 296 -15 2459 196 30 2 chr10 6994628 6994739 -138594549 + LOR1a LTR ERV1 1 107 -390 2287 123 0 0 chr10 6994739 6995047 -138594241 - AluSx SINE Alu -4 308 1 2459 196 30 2 chr10 6995047 6995410 -138593878 + LOR1a LTR ERV1 107 488 -9 237 232 29 43 chr10 6995980 6996049 -138593239 + MER5B DNA MER1_type 1 68 -110 675 236 133 5 chr10 6996054 6996249 -138593039 + L1M4 LINE L1 4716 4935 -1211 257 318 40 103 chr10 6996601 6996752 -138592536 + MIR SINE MIR 54 188 -74 2145 137 0 0 chr10 6996752 6997059 -138592229 - AluSx SINE Alu -5 307 1 257 318 40 103 chr10 6997059 6997130 -138592158 + MIR SINE MIR 188 262 0 214 365 14 73 chr10 6997346 6997518 -138591770 + MIR SINE MIR 31 189 -73 2450 145 0 0 chr10 6997518 6997855 -138591433 + MER1B DNA MER1_type 1 337 0 214 365 14 73 chr10 6997855 6997901 -138591387 + MIR SINE MIR 189 236 -26 1590 129 22 0 chr10 6998035 6998260 -138591028 - MER30 DNA MER1_type 0 230 1 197 300 67 11 chr10 6998260 6998344 -138590944 - MIR3 SINE MIR -12 196 108 39 84 0 0 chr10 6998804 6998899 -138590389 + AT_rich Low_complexity Low_complexity 1 95 0 203 295 168 32 chr10 6999042 6999137 -138590151 + MIR SINE MIR 37 144 -64 217 269 281 44 chr10 7000051 7000211 -138589077 - MIR3 SINE MIR -5 203 6 813 210 0 31 chr10 7000232 7000394 -138588894 + AluJo SINE Alu 126 282 -30 24 0 0 0 chr10 7000394 7000418 -138588870 + AT_rich Low_complexity Low_complexity 1 24 0 271 218 0 0 chr10 7000517 7000572 -138588716 - L1MC4 LINE L1 -1 8041 7987 1014 254 196 42 chr10 7000574 7001144 -138588144 - L1MC4 LINE L1 -144 7898 7241 1194 240 80 27 chr10 7001149 7001627 -138587661 - L1MC4 LINE L1 -810 7083 6500 295 178 14 14 chr10 7001635 7001708 -138587580 + CT-rich Low_complexity Low_complexity 3 75 0 357 240 7 32 chr10 7001708 7001818 -138587470 - L1MC4 LINE L1 -1454 6549 6431 827 204 4 116 chr10 7002624 7002873 -138586415 - MLT1B LTR MaLR -2 388 168 405 193 148 0 chr10 7002873 7002961 -138586327 + LOR1b LTR ERV1 1 101 -360 766 256 9 9 chr10 7002970 7003181 -138586107 + L1PBa LINE L1 6 216 -6647 * 2323 156 8 18 chr10 7003158 7003589 -138585699 + L1PBa LINE L1 1392 1902 -4960 180 0 0 0 chr10 7004328 7004348 -138584940 + (T)n Simple_repeat Simple_repeat 1 20 0 294 58 0 58 chr10 7004533 7004585 -138584703 - FAM SINE Alu 0 179 131 886 165 0 0 chr10 7004601 7004734 -138584554 - FLAM_C SINE Alu 0 133 1 325 220 92 18 chr10 7005282 7005391 -138583897 - MER91A DNA MER1_type -25 171 55 218 190 0 17 chr10 7006388 7006446 -138582842 + CT-rich Low_complexity Low_complexity 4 60 0 360 0 0 0 chr10 7007916 7007956 -138581332 + (TG)n Simple_repeat Simple_repeat 2 41 0 843 300 80 34 chr10 7010034 7010648 -138578640 - HAL1b LINE L1 -475 873 232 2035 114 11 0 chr10 7010697 7011134 -138578154 + AluSx SINE Alu 1 440 0 646 164 68 41 chr10 7012254 7012348 -138576940 + MER39 LTR ERV1 558 659 -48 2684 163 19 0 chr10 7012348 7012766 -138576522 - MSTB LTR MaLR 0 426 1 646 164 68 41 chr10 7012766 7012817 -138576471 + MER39 LTR ERV1 659 707 0 690 198 52 66 chr10 7014435 7014647 -138574641 + MER39 LTR ERV1 393 601 -106 838 52 0 0 chr10 7014647 7014743 -138574545 + AluYb8 SINE Alu 10 105 -213 1265 113 0 0 chr10 7014844 7015012 -138574276 - AluSx SINE Alu -144 168 1 453 298 6 38 chr10 7015746 7015904 -138573384 + MIR SINE MIR 2 154 -108 915 164 224 27 chr10 7016247 7016430 -138572858 - MER20 DNA MER1_type 0 219 1 184 324 14 14 chr10 7016573 7016647 -138572641 + L2 LINE L2 2682 2755 -559 319 133 0 27 chr10 7016774 7016849 -138572439 + (CA)n Simple_repeat Simple_repeat 2 74 0 323 350 108 54 chr10 7016853 7017224 -138572064 + L2 LINE L2 2874 3264 -8 410 304 89 54 chr10 7017983 7018107 -138571181 + MIR SINE MIR 31 168 -94 197 65 32 0 chr10 7018107 7018138 -138571150 + (TAGA)n Simple_repeat Simple_repeat 1 32 0 410 304 89 54 chr10 7018138 7018237 -138571051 + MIR SINE MIR 168 262 0 717 45 18 9 chr10 7018381 7018492 -138570796 + (GA)n Simple_repeat Simple_repeat 1 112 0 297 244 62 62 chr10 7019278 7019438 -138569850 + MIR SINE MIR 48 207 -55 203 297 63 92 chr10 7020740 7020979 -138568309 - L2 LINE L2 -108 3164 2933 854 144 8 0 chr10 7021010 7021142 -138568146 - MER4A LTR ERV1 0 664 532 876 324 57 0 chr10 7021151 7021487 -138567801 - L2 LINE L2 -942 2372 2018 243 302 47 81 chr10 7021750 7021786 -138567502 + L3 LINE CR1 1432 1468 -109 1637 202 125 46 chr10 7021786 7022266 -138567022 - MLT2B1 LTR ERVL -2 518 1 243 302 47 81 chr10 7022266 7022378 -138566910 + L3 LINE CR1 1468 1575 -2 2184 120 7 7 chr10 7022430 7022739 -138566549 + AluSx SINE Alu 1 309 -3 2258 88 0 7 chr10 7023926 7024231 -138565057 + AluSc SINE Alu 1 303 -6 207 0 0 0 chr10 7024330 7024353 -138564935 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 22 0 0 0 chr10 7024417 7024439 -138564849 + AT_rich Low_complexity Low_complexity 1 22 0 855 300 31 28 chr10 7024610 7024963 -138564325 - L1MC4a LINE L1 -1866 5942 5589 427 332 69 40 chr10 7024975 7025725 -138563563 - L1MC4a LINE L1 -1699 4447 3676 3687 244 64 24 chr10 7025922 7026035 -138563253 + L1ME2 LINE L1 4145 4252 -1912 1889 116 4 0 chr10 7026035 7026303 -138562985 + AluSx SINE Alu 44 312 0 3687 244 64 24 chr10 7026303 7026546 -138562742 + L1ME2 LINE L1 4252 4484 -1680 2105 142 49 27 chr10 7026546 7026912 -138562376 - THE1C LTR MaLR -1 374 1 3687 244 64 24 chr10 7026912 7028505 -138560783 + L1ME2 LINE L1 4484 6164 0 637 311 121 34 chr10 7028556 7029118 -138560170 + L1ME4a LINE L1 5499 6109 -12 564 327 133 7 chr10 7029777 7030055 -138559233 + L3b LINE CR1 1171 1483 -100 2495 185 150 28 chr10 7030278 7031116 -138558172 - LTR28 LTR ERV1 0 1020 3 200 196 0 18 chr10 7032342 7032398 -138556890 + GA-rich Low_complexity Low_complexity 2 56 0 463 287 0 0 chr10 7032416 7032524 -138556764 + MER34 LTR ERV1 1 108 -434 * 750 267 40 63 chr10 7032506 7033032 -138556256 + MER34 LTR ERV1 34 540 -2 515 272 44 81 chr10 7033629 7033663 -138555625 + MIR SINE MIR 1 35 -227 2175 129 3 3 chr10 7033663 7033974 -138555314 + AluSq SINE Alu 1 311 -2 515 272 44 81 chr10 7033974 7034129 -138555159 + MIR SINE MIR 35 180 -82 1911 151 7 7 chr10 7034129 7034427 -138554861 + AluJo SINE Alu 7 304 -8 515 272 44 81 chr10 7034427 7034508 -138554780 + MIR SINE MIR 180 262 0 2159 115 0 38 chr10 7034669 7034983 -138554305 + AluSx SINE Alu 1 302 -10 1983 132 3 3 chr10 7035241 7035536 -138553752 - AluSc SINE Alu -14 295 1 681 146 18 9 chr10 7036352 7036462 -138552826 + MSTB LTR MaLR 2 112 -314 1839 73 146 137 chr10 7036466 7037024 -138552264 - LTR12 LTR ERV1 0 714 5 1639 195 26 3 chr10 7037024 7037326 -138551962 + MSTB LTR MaLR 118 426 0 2643 159 33 7 chr10 7037326 7037779 -138551509 - Tigger5 DNA MER2_type -24 2299 1835 1048 186 68 41 chr10 7037771 7037991 -138551297 - Tigger5 DNA MER2_type -2097 226 1 * 1452 190 93 22 chr10 7037997 7038318 -138550970 - MER2 DNA MER2_type 0 344 1 281 301 36 12 chr10 7038513 7038596 -138550692 + L2 LINE L2 2989 3073 -199 201 74 0 0 chr10 7038806 7038833 -138550455 + (TGAA)n Simple_repeat Simple_repeat 4 30 0 1600 161 169 21 chr10 7038898 7039270 -138550018 + MSTC LTR MaLR 2 428 0 282 29 0 0 chr10 7039758 7039793 -138549495 + (GA)n Simple_repeat Simple_repeat 2 36 0 584 234 51 13 chr10 7040163 7040321 -138548967 + MER5B DNA MER1_type 1 164 -14 411 259 20 26 chr10 7040390 7040538 -138548750 + MER21B LTR ERV1 17 197 -408 1400 296 54 51 chr10 7040596 7041188 -138548100 + MER21B LTR ERV1 159 752 -111 874 166 13 26 chr10 7041201 7041352 -138547936 - MER63 DNA MER1_type -56 780 6 949 192 0 0 chr10 7042273 7042424 -138546864 + FRAM SINE Alu 4 154 -12 201 74 0 0 chr10 7042482 7042509 -138546779 + (CA)n Simple_repeat Simple_repeat 2 28 0 901 228 67 0 chr10 7042693 7042886 -138546402 + MER3 DNA MER1_type 4 209 0 2254 180 5 18 chr10 7042947 7043341 -138545947 - MLT1B LTR MaLR -1 389 1 2201 127 0 0 chr10 7043781 7044081 -138545207 - AluSx SINE Alu -12 300 1 256 227 27 40 chr10 7044384 7044459 -138544829 + MIR SINE MIR 189 262 0 463 321 77 47 chr10 7044740 7045482 -138543806 - L1M4 LINE L1 -1699 4447 3684 385 311 78 15 chr10 7045522 7045792 -138543496 - L1M4 LINE L1 -2731 3415 3129 534 161 200 89 chr10 7045969 7046118 -138543170 + MER3 DNA MER1_type 1 175 -34 2399 90 7 0 chr10 7046118 7046417 -138542871 + AluSc SINE Alu 1 301 -8 534 161 200 89 chr10 7046417 7046447 -138542841 + MER3 DNA MER1_type 175 200 -9 191 141 51 0 chr10 7046567 7046645 -138542643 + (TA)n Simple_repeat Simple_repeat 2 83 0 941 158 13 6 chr10 7047355 7047513 -138541775 + AluSg/x SINE Alu 146 304 -8 256 310 207 19 chr10 7047633 7047846 -138541442 + MIR SINE MIR 1 253 -9 967 229 128 81 chr10 7048476 7048983 -138540305 - MER34B LTR ERV1 0 565 35 836 189 78 0 chr10 7049001 7049154 -138540134 - MER58A DNA MER1_type -34 190 26 21 36 0 0 chr10 7049236 7049264 -138540024 + AT_rich Low_complexity Low_complexity 1 28 0 441 322 46 66 chr10 7049507 7049924 -138539364 + L2 LINE L2 2196 2681 -633 1908 173 0 3 chr10 7049924 7050237 -138539051 + AluJb SINE Alu 1 312 0 441 322 46 66 chr10 7050237 7050308 -138538980 + L2 LINE L2 2681 2752 -562 6197 17 6 0 chr10 7050308 7051454 -138537834 + L1PA3 LINE L1 4812 5961 -194 289 336 55 23 chr10 7052027 7052155 -138537133 + L2 LINE L2 3134 3265 -7 2125 138 7 0 chr10 7052205 7052509 -138536779 + AluSx SINE Alu 1 306 -6 2256 116 3 0 chr10 7052518 7052819 -138536469 + AluSx SINE Alu 1 302 -10 21 0 0 0 chr10 7053437 7053458 -138535830 + AT_rich Low_complexity Low_complexity 1 21 0 3504 117 71 11 chr10 7053761 7054284 -138535004 + MER41C LTR ERV1 1 554 0 220 283 17 0 chr10 7054431 7054491 -138534797 + CT-rich Low_complexity Low_complexity 2 62 0 192 343 45 0 chr10 7055175 7055242 -138534046 + MIR SINE MIR 41 110 -152 5377 191 17 27 chr10 7055520 7057165 -138532123 + L1PB3 LINE L1 4177 5793 -361 198 0 0 0 chr10 7057165 7057187 -138532101 + (TA)n Simple_repeat Simple_repeat 2 23 0 5377 191 17 27 chr10 7057187 7057546 -138531742 + L1PB3 LINE L1 5793 6154 0 3204 161 49 12 chr10 7057563 7058133 -138531155 + L1MB3 LINE L1 5586 6176 -7 1354 167 42 141 chr10 7058318 7058750 -138530538 - MLT1B LTR MaLR -1 389 1 2427 118 49 26 chr10 7059109 7059311 -138529977 + L1PB2 LINE L1 5748 5944 -207 2892 91 8 6 chr10 7059311 7059674 -138529614 - THE1B LTR MaLR 0 364 1 2427 118 49 26 chr10 7059674 7059862 -138529426 + L1PB2 LINE L1 5944 6147 -4 231 315 0 0 chr10 7060283 7060356 -138528932 + (CA)n Simple_repeat Simple_repeat 2 74 0 1296 150 4 26 chr10 7061748 7061981 -138527307 + AluJb SINE Alu 85 312 0 679 226 14 2 chr10 7062950 7063161 -138526127 + MLT1C LTR MaLR 223 467 0 219 363 60 27 chr10 7063187 7063520 -138525768 - L2 LINE L2 -840 2474 2131 836 251 69 20 chr10 7064359 7064850 -138524438 + MLT1E3 LTR MaLR 60 620 -4 219 186 0 0 chr10 7064997 7065040 -138524248 - L2 LINE L2 0 3313 3271 925 193 33 47 chr10 7066574 7066786 -138522502 + AluJo SINE Alu 1 209 -103 225 439 9 0 chr10 7066883 7066997 -138522291 + L2 LINE L2 3139 3253 -19 258 281 162 12 chr10 7068112 7068279 -138521009 - L1MC/D LINE L1 -1953 5855 5664 23 0 0 0 chr10 7068549 7068572 -138520716 + AT_rich Low_complexity Low_complexity 1 23 0 615 273 24 75 chr10 7068788 7069054 -138520234 + MIR SINE MIR 5 258 -4 271 314 0 0 chr10 7070194 7070264 -138519024 - L2 LINE L2 -18 3254 3185 805 113 9 9 chr10 7070271 7070386 -138518902 - THE1B LTR MaLR -8 356 242 419 276 134 42 chr10 7070414 7070875 -138518413 - L2 LINE L2 -221 3092 2594 2124 139 0 13 chr10 7072225 7072541 -138516747 + AluSx SINE Alu 1 312 0 400 325 64 43 chr10 7072734 7073014 -138516274 - L1ME LINE L1 -408 5754 5469 1502 186 25 94 chr10 7073069 7073194 -138516094 + MLT1A1 LTR MaLR 1 133 -232 2461 126 31 20 chr10 7073194 7073552 -138515736 + THE1B LTR MaLR 1 362 -2 1502 186 25 94 chr10 7073552 7073818 -138515470 + MLT1A1 LTR MaLR 133 365 0 391 224 51 10 chr10 7073845 7073943 -138515345 + L1MC3 LINE L1 7663 7764 -21 245 294 0 9 chr10 7073990 7074099 -138515189 - L1ME LINE L1 -2408 5400 5293 1423 197 67 54 chr10 7074321 7074692 -138514596 - MLT1B LTR MaLR 0 390 15 295 325 101 37 chr10 7076406 7076594 -138512694 - MIR SINE MIR -14 248 49 4872 227 34 12 chr10 7076603 7078193 -138511095 + L1PB1 LINE L1 4150 5794 -357 1050 53 0 0 chr10 7078193 7078326 -138510962 + (TA)n Simple_repeat Simple_repeat 2 134 0 4872 227 34 12 chr10 7078326 7078692 -138510596 + L1PB1 LINE L1 5794 6151 0 889 207 58 11 chr10 7078848 7079036 -138510252 - MER58A DNA MER1_type -15 209 13 1497 262 33 9 chr10 7080532 7081030 -138508258 - MER90 LTR ERV1 -23 591 5 1554 186 60 23 chr10 7081034 7081384 -138507904 + MER45B DNA AcHobo 678 1040 0 525 315 41 10 chr10 7082742 7082939 -138506349 - MIR SINE MIR -55 207 5 427 323 52 39 chr10 7083947 7084102 -138505186 + MIR3 SINE MIR 38 194 -14 181 250 23 0 chr10 7084227 7084271 -138505017 + MIR SINE MIR 93 137 -71 * 207 320 124 0 chr10 7084267 7084364 -138504924 - L2 LINE L2 -43 3229 3121 * 292 261 0 0 chr10 7084343 7084408 -138504880 + MIR3 SINE MIR 143 207 -1 281 296 112 20 chr10 7085211 7085363 -138503925 + MIR SINE MIR 27 192 -70 2681 121 48 10 chr10 7085407 7085819 -138503469 + MSTA LTR MaLR 1 428 0 405 123 0 0 chr10 7087501 7087566 -138501722 + (TGAA)n Simple_repeat Simple_repeat 3 67 0 266 287 40 20 chr10 7087728 7087829 -138501459 - MIR3 SINE MIR -30 178 76 1028 255 91 31 chr10 7088022 7088442 -138500846 - HsTC2 DNA Tc2 -3 1895 1275 1660 267 26 20 chr10 7088465 7088963 -138500325 - HsTC2 DNA Tc2 -1394 504 4 977 210 0 0 chr10 7089096 7089258 -138500030 - FRAM SINE Alu -3 163 2 432 272 83 30 chr10 7089299 7089468 -138499820 + MER5B DNA MER1_type 1 178 0 1363 183 31 0 chr10 7090239 7090496 -138498792 - L1MA4 LINE L1 -14 6286 6022 427 164 33 90 chr10 7090498 7090546 -138498742 + L1MA4 LINE L1 5902 5951 -349 2357 97 7 0 chr10 7090546 7090844 -138498444 + AluSx SINE Alu 2 301 -11 427 164 33 90 chr10 7090844 7090917 -138498371 + L1MA4 LINE L1 5951 6016 -284 1546 86 99 5 chr10 7091150 7091372 -138497916 - MER75B DNA T2_type 0 243 1 534 272 52 26 chr10 7091828 7092019 -138497269 + MIR SINE MIR 67 262 0 1653 128 83 4 chr10 7092618 7092883 -138496405 + AluJb SINE Alu 3 288 -24 321 118 0 0 chr10 7092958 7093009 -138496279 + (TTCC)n Simple_repeat Simple_repeat 2 52 0 4336 88 14 0 chr10 7093020 7093576 -138495712 - L1PA10 LINE L1 -4 6164 5601 280 188 0 0 chr10 7093723 7093771 -138495517 - MER75 DNA T2_type -4 510 463 821 215 48 72 chr10 7095128 7095175 -138494113 + Tigger7 DNA MER2_type 64 111 -622 2441 79 0 0 chr10 7095175 7095479 -138493809 - AluY SINE Alu -7 304 1 821 215 48 72 chr10 7095479 7095640 -138493648 + Tigger7 DNA MER2_type 111 267 -466 487 209 0 0 chr10 7095637 7095728 -138493560 + Tigger7 DNA MER2_type 2392 2482 -9 * 228 67 0 0 chr10 7097301 7097331 -138491957 + (T)n Simple_repeat Simple_repeat 1 30 0 1441 126 5 5 chr10 7097364 7097570 -138491718 + AluJb SINE Alu 85 290 -22 975 85 0 48 chr10 7097574 7097763 -138491525 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1752 150 0 0 chr10 7098028 7098301 -138490987 + AluJo SINE Alu 30 302 -10 1659 182 14 27 chr10 7098691 7098988 -138490300 + AluJb SINE Alu 1 293 -19 420 349 25 28 chr10 7099603 7099887 -138489401 - L1ME3A LINE L1 -221 5949 5667 364 261 35 43 chr10 7099912 7100027 -138489261 - MER5B DNA MER1_type -5 173 60 197 293 168 24 chr10 7100116 7100283 -138489005 - L2 LINE L2 -208 3064 2874 1615 205 25 47 chr10 7100286 7100372 -138488916 - Zaphod DNA AcHobo -4 4027 3941 1563 197 10 7 chr10 7100372 7100662 -138488626 + AluJo SINE Alu 1 291 -21 1615 205 25 47 chr10 7100662 7101018 -138488270 - Zaphod DNA AcHobo -90 3941 3595 864 206 71 90 chr10 7101016 7101091 -138488197 - Zaphod DNA AcHobo -3041 990 915 * 5513 32 34 2 chr10 7101091 7101717 -138487571 + SVA Other Other 741 1386 0 864 206 71 90 chr10 7101717 7101999 -138487289 - Zaphod DNA AcHobo -3116 915 642 2472 187 36 46 chr10 7101999 7102395 -138486893 - MER74A LTR ERVL -2 556 166 2092 125 3 34 chr10 7102395 7102715 -138486573 + AluSg SINE Alu 1 310 0 2472 187 36 46 chr10 7102715 7102880 -138486408 - MER74A LTR ERVL -392 166 1 864 206 71 90 chr10 7102880 7102987 -138486301 - Zaphod DNA AcHobo -3389 642 534 2010 292 82 38 chr10 7103005 7104059 -138485229 + Charlie8 DNA MER1_type 166 1265 -1152 1379 247 117 93 chr10 7104123 7105149 -138484139 + Charlie8 DNA MER1_type 1367 2417 0 282 254 85 25 chr10 7105232 7105350 -138483938 - L2 LINE L2 -2 3311 3187 309 292 124 0 chr10 7106648 7106761 -138482527 + HAL1 LINE L1 4 130 -2377 243 0 0 0 chr10 7106999 7107026 -138482262 + (T)n Simple_repeat Simple_repeat 1 27 0 1787 180 42 9 chr10 7107026 7107359 -138481929 - L1MC1 LINE L1 -13 6320 5977 1979 66 4 0 chr10 7109582 7109823 -138479465 + L1PA5 LINE L1 5913 6154 0 560 267 134 31 chr10 7110377 7110786 -138478502 + MLT1H1 LTR MaLR 1 473 -117 226 324 14 0 chr10 7110836 7110907 -138478381 + L3 LINE CR1 1307 1378 -199 1685 190 10 3 chr10 7110948 7111258 -138478030 + AluJo SINE Alu 1 312 0 251 338 105 0 chr10 7111276 7111409 -138477879 + MIR SINE MIR 56 202 -60 625 250 215 12 chr10 7111795 7112135 -138477153 + LTR16A LTR ERVL 21 429 -21 469 159 45 0 chr10 7112567 7112655 -138476633 + MER112 DNA MER1_type 138 229 -31 358 309 176 0 chr10 7112780 7112945 -138476343 + MER112 DNA MER1_type 26 219 -41 4236 87 16 12 chr10 7113660 7114512 -138474776 + L1PA8 LINE L1 4767 5614 -517 1843 82 115 4 chr10 7114512 7114772 -138474516 + L1PA8 LINE L1 5874 6172 0 378 254 49 35 chr10 7117611 7117753 -138471535 - L2 LINE L2 -19 3294 3151 217 324 27 27 chr10 7117843 7117991 -138471297 - L2 LINE L2 -126 3187 3040 7955 105 12 24 chr10 7118000 7119150 -138470138 + HSMAR1 DNA Mariner 1 1136 -151 8845 103 10 22 chr10 7119250 7120503 -138468785 + HSMAR1 DNA Mariner 46 1282 -5 2077 281 63 23 chr10 7120506 7121060 -138468228 - L2 LINE L2 -286 3027 2332 1775 181 66 15 chr10 7121060 7121095 -138468193 - MLT2D LTR ERVL -2 412 380 333 0 0 0 chr10 7121095 7121132 -138468156 + (TG)n Simple_repeat Simple_repeat 2 38 0 1775 181 66 15 chr10 7121132 7121488 -138467800 - MLT2D LTR ERVL -34 380 1 2077 281 63 23 chr10 7121488 7121789 -138467499 - L2 LINE L2 -981 2332 2044 916 225 90 5 chr10 7122435 7122635 -138466653 - MER58A DNA MER1_type -6 218 2 29 0 0 0 chr10 7123621 7123650 -138465638 + AT_rich Low_complexity Low_complexity 1 29 0 426 249 109 15 chr10 7124078 7124240 -138465048 - MIR SINE MIR -51 211 32 403 307 107 19 chr10 7124855 7125060 -138464228 - MIR SINE MIR -5 257 35 282 73 0 0 chr10 7125915 7125956 -138463332 + (CA)n Simple_repeat Simple_repeat 1 41 0 741 244 25 6 chr10 7126012 7126172 -138463116 + MER63A DNA MER1_type 48 210 0 361 299 0 30 chr10 7126769 7126901 -138462387 + MIR SINE MIR 32 158 -82 658 328 20 4 chr10 7126912 7127156 -138462132 - MIR SINE MIR -13 249 2 269 350 43 17 chr10 7127715 7127832 -138461456 + MIR SINE MIR 25 144 -64 2995 259 37 37 chr10 7129069 7130249 -138459039 + L1MA9 LINE L1 42 1220 -5886 2486 160 3 0 chr10 7130249 7130612 -138458676 - THE1B LTR MaLR 0 364 1 2995 259 37 37 chr10 7130612 7131353 -138457935 + L1MA9 LINE L1 1220 1959 -5147 228 67 0 0 chr10 7131353 7131383 -138457905 + (TA)n Simple_repeat Simple_repeat 1 30 0 2995 259 37 37 chr10 7131383 7131399 -138457889 + L1MA9 LINE L1 1959 1973 -5133 2170 112 0 0 chr10 7131399 7131684 -138457604 - AluSg SINE Alu -25 285 1 2995 259 37 37 chr10 7131684 7132373 -138456915 + L1MA9 LINE L1 1973 2660 -4446 2261 114 16 0 chr10 7132373 7132681 -138456607 + AluSp SINE Alu 1 313 0 2995 259 37 37 chr10 7132681 7133556 -138455732 + L1MA9 LINE L1 2660 4135 -2971 4853 164 53 46 chr10 7133643 7134438 -138454850 + L1MA9 LINE L1 5280 6068 -1204 2411 193 39 0 chr10 7134438 7134848 -138454440 + MSTB LTR MaLR 1 426 0 4853 164 53 46 chr10 7134848 7135042 -138454246 + L1MA9 LINE L1 6068 6259 -1013 1657 109 91 69 chr10 7135042 7135352 -138453936 + AluSg SINE Alu 1 316 0 4853 164 53 46 chr10 7135352 7136134 -138453154 + L1MA9 LINE L1 6259 7063 -209 2763 136 11 33 chr10 7136136 7136459 -138452829 + L1PB3 LINE L1 5708 6020 -134 2149 119 10 3 chr10 7136459 7136769 -138452519 + AluSx SINE Alu 1 312 0 2763 136 11 33 chr10 7136769 7136900 -138452388 + L1PB3 LINE L1 6020 6152 -2 1203 154 23 14 chr10 7136919 7137133 -138452155 + L1MA9 LINE L1 7057 7272 0 763 311 10 0 chr10 7137413 7137619 -138451669 - MIR SINE MIR -32 230 23 357 281 189 0 chr10 7138754 7138918 -138450370 + MER112 DNA MER1_type 60 254 -6 2062 151 138 26 chr10 7139051 7139436 -138449852 - MSTA LTR MaLR 0 428 1 2381 126 27 33 chr10 7140165 7140531 -138448757 + THE1B LTR MaLR 1 364 0 2305 114 37 45 chr10 7141016 7141394 -138447894 - THE1C LTR MaLR 0 375 1 356 262 69 54 chr10 7141811 7141996 -138447292 + MIR SINE MIR 15 204 -4 1879 144 33 13 chr10 7142229 7142534 -138446754 + AluSx SINE Alu 1 311 -1 4456 183 11 0 chr10 7142618 7143407 -138445881 + L1MB3 LINE L1 5379 6176 -7 197 292 226 15 chr10 7144108 7144303 -138444985 - MIR SINE MIR -6 256 21 372 265 22 55 chr10 7144387 7144568 -138444720 - Charlie7 DNA MER1_type 0 2612 2438 227 286 9 29 chr10 7144544 7144649 -138444639 - Charlie7 DNA MER1_type -2502 110 8 * 2071 132 63 11 chr10 7145600 7145948 -138443340 - THE1C LTR MaLR 0 375 10 2088 254 48 36 chr10 7146633 7147465 -138441823 + L1ME3A LINE L1 5127 5973 -197 502 265 29 0 chr10 7147480 7147616 -138441672 + L1ME3A LINE L1 5913 6052 -118 441 259 52 35 chr10 7147640 7147814 -138441474 + L1ME3A LINE L1 5989 6165 -5 4772 27 2 0 chr10 7147934 7148460 -138440828 + L1PA5 LINE L1 5625 6151 -3 1765 178 27 40 chr10 7149771 7150141 -138439147 + MLT1A1 LTR MaLR 1 365 0 398 306 97 8 chr10 7150213 7150347 -138438941 - L2 LINE L2 0 3272 3127 814 319 25 0 chr10 7150437 7150675 -138438613 - MIR SINE MIR -6 256 13 204 352 0 0 chr10 7150694 7150782 -138438506 - L2 LINE L2 -193 3079 2992 466 302 83 0 chr10 7151597 7151766 -138437522 + MIR SINE MIR 28 210 -52 1129 253 68 7 chr10 7152085 7152381 -138436907 - MLT1C LTR MaLR 0 467 154 2399 173 24 18 chr10 7152390 7152847 -138436441 + MER66B LTR ERV1 27 486 0 693 134 104 0 chr10 7152847 7152981 -138436307 - MLT1C LTR MaLR -314 153 6 420 256 0 0 chr10 7153864 7154036 -138435252 + (TG)n Simple_repeat Simple_repeat 1 172 0 204 143 0 0 chr10 7154080 7154122 -138435166 + (TG)n Simple_repeat Simple_repeat 1 42 0 21 0 0 0 chr10 7154335 7154356 -138434932 + AT_rich Low_complexity Low_complexity 1 21 0 579 328 40 12 chr10 7154356 7154609 -138434679 + MIR SINE MIR 3 262 0 353 271 0 10 chr10 7154966 7155062 -138434226 + L2 LINE L2 3197 3291 -22 392 285 26 20 chr10 7155102 7155253 -138434035 - MIR SINE MIR -23 239 88 238 225 42 0 chr10 7155400 7155471 -138433817 + GA-rich Low_complexity Low_complexity 1 74 0 2287 133 38 12 chr10 7158181 7158527 -138430761 - THE1A LTR MaLR 0 355 1 2897 175 68 26 chr10 7159109 7159393 -138429895 - MER7C DNA MER2_type -2426 602 331 1876 117 9 74 chr10 7159393 7159535 -138429753 + AluJb SINE Alu 3 153 -159 2289 101 0 3 chr10 7159535 7159831 -138429457 + AluY SINE Alu 1 295 -16 1876 117 9 74 chr10 7159831 7160014 -138429274 + AluJb SINE Alu 153 307 -5 2897 175 68 26 chr10 7160014 7160307 -138428981 - MER7C DNA MER2_type -2697 331 1 2315 125 47 36 chr10 7160554 7160914 -138428374 + THE1B LTR MaLR 1 364 0 425 207 11 11 chr10 7161744 7161831 -138427457 + MER5B DNA MER1_type 5 91 -87 1098 268 96 28 chr10 7161932 7162174 -138427114 + MLT1C LTR MaLR 1 225 -242 2294 202 24 77 chr10 7162174 7162759 -138426529 - MLT2B3 LTR ERVL 0 554 1 1098 268 96 28 chr10 7162759 7162953 -138426335 + MLT1C LTR MaLR 225 467 0 226 250 215 0 chr10 7163510 7163654 -138425634 + MER112 DNA MER1_type 60 234 -26 383 211 53 44 chr10 7163676 7163790 -138425498 + L1MC5 LINE L1 7609 7723 -238 340 225 75 75 chr10 7164281 7164468 -138424820 + L1MC5 LINE L1 7717 7903 -58 180 337 112 53 chr10 7164727 7164896 -138424392 + L2 LINE L2 3088 3266 -6 2055 103 0 4 chr10 7164973 7165236 -138424052 + AluSp SINE Alu 34 295 -18 611 296 47 39 chr10 7165325 7165558 -138423730 - MIR SINE MIR -10 252 18 182 286 100 0 chr10 7165703 7165773 -138423515 - MIR SINE MIR -7 255 179 3590 174 0 17 chr10 7166413 7166474 -138422814 + L1MB3 LINE L1 5553 5614 -569 1568 220 48 20 chr10 7166474 7166829 -138422459 + MLT1A1 LTR MaLR 1 365 0 3590 174 0 17 chr10 7166829 7167374 -138421914 + L1MB3 LINE L1 5614 6150 -33 1910 100 30 50 chr10 7167374 7167675 -138421613 + AluSq SINE Alu 1 295 -18 3590 174 0 17 chr10 7167675 7167706 -138421582 + L1MB3 LINE L1 6150 6180 -3 205 200 0 0 chr10 7167710 7167750 -138421538 + (TAAA)n Simple_repeat Simple_repeat 2 41 0 1938 129 0 11 chr10 7168148 7168428 -138420860 - AluSx SINE Alu -6 306 30 505 155 0 0 chr10 7168429 7168500 -138420788 + AluS SINE Alu 16 86 -227 300 70 0 0 chr10 7168513 7168556 -138420732 + (TTA)n Simple_repeat Simple_repeat 3 45 0 38765 30 26 1 chr10 7168556 7173977 -138415311 - L1PA2 LINE L1 -18 6137 578 828 41 0 0 chr10 7173944 7174042 -138415246 - L1PA2 LINE L1 -6048 98 1 * 221 277 78 64 chr10 7174113 7174254 -138415034 - MIR SINE MIR -72 190 48 1813 162 0 24 chr10 7175196 7175493 -138413795 + AluSx SINE Alu 1 290 -22 1923 71 0 4 chr10 7175501 7175740 -138413548 + AluY SINE Alu 46 283 -28 381 22 0 0 chr10 7175748 7175794 -138413494 + (TAAAA)n Simple_repeat Simple_repeat 5 50 0 967 110 26 39 chr10 7176040 7176157 -138413131 - Charlie3 DNA MER1_type 0 2702 2586 2135 121 0 7 chr10 7176157 7176454 -138412834 - AluSq SINE Alu -16 297 3 967 110 26 39 chr10 7176454 7176491 -138412797 - Charlie3 DNA MER1_type -116 2586 2550 343 43 0 0 chr10 7176502 7176549 -138412739 + Charlie3 DNA MER1_type 2533 2579 -131 * 2430 117 32 36 chr10 7176515 7176926 -138412362 - MER1A DNA MER1_type -120 409 1 1650 46 0 46 chr10 7176943 7177160 -138412128 + AluY SINE Alu 105 311 0 1883 172 0 16 chr10 7177941 7178255 -138411033 - AluJb SINE Alu -3 309 1 1212 134 0 0 chr10 7178608 7178787 -138410501 - AluYa5 SINE Alu 0 311 133 3058 179 39 7 chr10 7178791 7179181 -138410107 - L1MB2 LINE L1 0 6171 5756 2471 77 0 3 chr10 7179181 7179491 -138409797 - AluY SINE Alu -2 309 1 3058 179 39 7 chr10 7179491 7179670 -138409618 - L1MB2 LINE L1 -415 5756 5584 1456 257 118 47 chr10 7179946 7180864 -138408424 - L2 LINE L2 0 3313 2333 202 128 26 0 chr10 7181516 7181555 -138407733 + A-rich Low_complexity Low_complexity 2 41 0 587 327 98 42 chr10 7182294 7182481 -138406807 + L1MEc LINE L1 57 232 -6164 312 91 0 0 chr10 7182481 7182525 -138406763 + (CA)n Simple_repeat Simple_repeat 1 44 0 587 327 98 42 chr10 7182525 7183176 -138406112 + L1MEc LINE L1 232 942 -5454 * 2018 236 87 23 chr10 7183147 7184123 -138405165 + L1ME2 LINE L1 5183 6226 -7 352 22 0 0 chr10 7184770 7184816 -138404472 + MADE1 DNA Mariner 1 46 -34 321 300 44 19 chr10 7185295 7185455 -138403833 + HAL1 LINE L1 390 553 -1954 309 311 68 87 chr10 7185619 7185780 -138403508 + HAL1 LINE L1 1762 1919 -588 618 294 60 33 chr10 7185897 7186316 -138402972 + HAL1 LINE L1 1993 2422 -85 757 258 151 25 chr10 7186329 7186760 -138402528 + LTR16C LTR ERVL 6 490 -1 233 310 59 91 chr10 7188392 7188579 -138400709 + L3 LINE CR1 405 585 -992 348 285 77 68 chr10 7188619 7188826 -138400462 + MIR SINE MIR 43 251 -11 2530 60 0 13 chr10 7189080 7189395 -138399893 - AluY SINE Alu 0 311 1 1741 199 21 8 chr10 7189400 7189781 -138399507 - L1MB2 LINE L1 -2 6169 5784 1280 150 23 35 chr10 7189789 7190049 -138399239 + L1 LINE L1 3640 3896 -2250 1705 175 99 19 chr10 7190604 7191027 -138398261 + LTR48 LTR ERV1 331 787 0 35 54 0 0 chr10 7191176 7191232 -138398056 + AT_rich Low_complexity Low_complexity 1 56 0 1193 150 84 14 chr10 7191772 7191985 -138397303 + MER30 DNA MER1_type 1 228 -2 1947 129 13 30 chr10 7192221 7192524 -138396764 + AluSq SINE Alu 5 302 -11 2266 82 0 24 chr10 7192893 7193186 -138396102 + AluSc SINE Alu 1 286 -23 327 340 49 0 chr10 7194310 7194454 -138394834 + L1M4 LINE L1 2470 2620 -3526 296 311 47 16 chr10 7194522 7194779 -138394509 + L1M4 LINE L1 2681 2945 -3201 412 267 51 70 chr10 7195292 7195565 -138393723 + MER113 DNA MER1_type? 94 361 -160 215 200 50 33 chr10 7196334 7196394 -138392894 + MIR SINE MIR 120 180 -82 201 174 0 87 chr10 7196829 7196898 -138392390 + (TCTCTG)n Simple_repeat Simple_repeat 6 68 0 237 291 24 12 chr10 7196976 7197141 -138392147 + (TG)n Simple_repeat Simple_repeat 2 168 0 312 27 0 0 chr10 7197176 7197213 -138392075 + (TG)n Simple_repeat Simple_repeat 1 37 0 1905 111 7 32 chr10 7197339 7197618 -138391670 - AluSq SINE Alu -41 272 1 821 129 7 21 chr10 7197622 7197762 -138391526 + MER50 LTR ERV1 574 711 -23 609 218 60 32 chr10 7197861 7198144 -138391144 - LTR29 LTR ERV1 -89 529 221 2260 123 0 13 chr10 7198303 7198619 -138390669 + AluSx SINE Alu 1 312 0 312 238 27 96 chr10 7198648 7198745 -138390543 - L1M4 LINE L1 -778 5368 5266 1808 176 3 3 chr10 7198745 7199034 -138390254 + AluJo SINE Alu 2 290 -22 312 238 27 96 chr10 7199034 7199171 -138390117 - L1M4 LINE L1 -880 5266 5151 1328 255 88 76 chr10 7199171 7199473 -138389815 + MLT1E1 LTR MaLR 1 298 -356 1966 131 0 30 chr10 7199473 7199796 -138389492 - AluSx SINE Alu 0 312 1 1328 255 88 76 chr10 7199796 7200139 -138389149 + MLT1E1 LTR MaLR 298 654 0 312 238 27 96 chr10 7200139 7200164 -138389124 - L1M4 LINE L1 -995 5151 5126 2431 112 0 0 chr10 7200208 7200521 -138388767 + AluSq SINE Alu 1 313 0 231 241 241 9 chr10 7201028 7201144 -138388144 + MIR3 SINE MIR 66 208 0 538 194 123 32 chr10 7201599 7201754 -138387534 - MER21B LTR ERV1 -57 806 638 230 250 10 0 chr10 7201872 7201885 -138387403 + (TA)n Simple_repeat Simple_repeat 2 13 -85 1332 81 0 6 chr10 7201885 7202059 -138387229 + L1PA8 LINE L1 5991 6163 -9 230 250 10 0 chr10 7202059 7202141 -138387147 + (TA)n Simple_repeat Simple_repeat 13 98 0 804 148 42 5 chr10 7202283 7203095 -138386193 - L1MC1 LINE L1 0 6333 5188 1905 154 0 37 chr10 7203100 7203424 -138385864 - AluJb SINE Alu 0 312 1 1527 203 135 0 chr10 7203486 7203835 -138385453 - MSTD LTR MaLR 0 396 1 2406 167 55 7 chr10 7204625 7205061 -138384227 - LTR32 LTR ERVL 0 471 15 1681 94 106 196 chr10 7205119 7205589 -138383699 - MSTA LTR MaLR 0 428 1 413 213 66 115 chr10 7205638 7205821 -138383467 + MER5A DNA MER1_type 2 175 -14 810 200 7 0 chr10 7205822 7205967 -138383321 + MER5A DNA MER1_type 14 159 -30 216 0 0 0 chr10 7206358 7206382 -138382906 + (GA)n Simple_repeat Simple_repeat 2 25 0 529 333 94 19 chr10 7206854 7207217 -138382071 + L3 LINE CR1 487 876 -701 198 294 249 34 chr10 7207231 7207321 -138381967 + L3 LINE CR1 1020 1089 -488 2076 100 0 31 chr10 7207321 7207611 -138381677 + AluSx SINE Alu 18 298 -14 198 294 249 34 chr10 7207611 7207697 -138381591 + L3 LINE CR1 1089 1234 -343 438 274 137 0 chr10 7208312 7208509 -138380779 - L1MC/D LINE L1 -1997 5811 5588 2361 94 10 0 chr10 7208511 7208818 -138380470 - AluSx SINE Alu -2 310 1 1826 134 54 0 chr10 7209735 7210012 -138379276 + AluSx SINE Alu 1 292 -20 2443 107 0 0 chr10 7210015 7210325 -138378963 + AluSx SINE Alu 1 310 -2 1099 134 128 0 chr10 7210344 7210531 -138378757 + AluJo SINE Alu 84 294 -18 699 207 124 6 chr10 7210604 7210773 -138378515 + MER5A DNA MER1_type 1 189 0 193 338 119 0 chr10 7212013 7212173 -138377115 + MIR SINE MIR 31 209 -53 209 303 91 30 chr10 7212582 7212681 -138376607 - MIR3 SINE MIR -43 165 61 271 243 61 52 chr10 7212970 7213115 -138376173 - MIR SINE MIR -54 208 62 476 171 0 11 chr10 7213963 7214051 -138375237 + MIR3 SINE MIR 101 187 -21 612 255 133 49 chr10 7214341 7214825 -138374463 - L2 LINE L2 -31 3282 2759 273 284 154 38 chr10 7215011 7215170 -138374118 + MIR SINE MIR 35 206 -56 1936 163 0 22 chr10 7215755 7216074 -138373214 + AluJb SINE Alu 1 312 0 205 167 19 56 chr10 7216810 7216864 -138372424 + MER91B DNA MER1_type 4 55 -135 310 273 187 7 chr10 7218157 7218296 -138370992 - MER5A DNA MER1_type 0 189 26 372 94 0 0 chr10 7218508 7218561 -138370727 + (TG)n Simple_repeat Simple_repeat 1 53 0 194 161 0 0 chr10 7219571 7219602 -138369686 + MIR SINE MIR 67 97 -165 1004 224 5 14 chr10 7219724 7219934 -138369354 - MIR SINE MIR -34 228 21 271 306 90 9 chr10 7220107 7220218 -138369070 + MIR SINE MIR 28 147 -115 243 230 35 92 chr10 7221391 7221478 -138367810 + MIR SINE MIR 79 160 -102 355 259 123 65 chr10 7221945 7222115 -138367173 - MIR3 SINE MIR -19 189 10 207 245 20 0 chr10 7222890 7222939 -138366349 - MIR3 SINE MIR -8 200 151 516 286 239 19 chr10 7223000 7224022 -138365266 - L2 LINE L2 0 3313 2008 446 310 65 0 chr10 7224136 7224291 -138364997 - MIR SINE MIR -97 165 1 1662 180 80 50 chr10 7224997 7225374 -138363914 - MLT1B LTR MaLR -2 388 1 7379 33 0 0 chr10 7226769 7227810 -138361478 - L1P2 LINE L1 -638 5517 4476 190 259 0 52 chr10 7227855 7227913 -138361375 - L2 LINE L2 -18 3254 3200 274 243 243 37 chr10 7227935 7228071 -138361217 + MIR3 SINE MIR 12 175 -33 1230 67 11 6 chr10 7228514 7228693 -138360595 + (TTC)n Simple_repeat Simple_repeat 1 180 0 1695 185 0 51 chr10 7228696 7229010 -138360278 - AluJb SINE Alu -14 298 1 4732 120 12 15 chr10 7229280 7229631 -138359657 + HSMAR2 DNA Mariner 2 352 -950 1750 121 0 0 chr10 7229631 7229862 -138359426 + AluSg/x SINE Alu 76 306 -4 4732 120 12 15 chr10 7229862 7230722 -138358566 + HSMAR2 DNA Mariner 352 1300 -2 378 362 46 9 chr10 7231589 7231807 -138357481 + MIR SINE MIR 22 247 -15 2319 86 7 10 chr10 7232429 7232730 -138356558 - AluSq SINE Alu -13 300 1 188 270 230 14 chr10 7232829 7232903 -138356385 - MIR SINE MIR -113 149 60 2344 120 0 0 chr10 7233408 7233707 -138355581 - AluSx SINE Alu -13 299 1 940 117 0 0 chr10 7234271 7234391 -138354897 - AluSq/x SINE Alu -193 120 1 341 283 80 43 chr10 7234442 7234580 -138354708 - L1M4 LINE L1 -1260 4886 4744 192 207 259 0 chr10 7234727 7234785 -138354503 - MIR SINE MIR -90 172 100 2319 119 0 0 chr10 7235366 7235678 -138353610 + AluSx SINE Alu 1 312 0 287 307 0 62 chr10 7236291 7236483 -138352805 + CT-rich Low_complexity Low_complexity 1 180 0 355 183 39 13 chr10 7236651 7236804 -138352484 + CT-rich Low_complexity Low_complexity 2 158 0 233 211 56 11 chr10 7237210 7237300 -138351988 - L1ME3 LINE L1 -91 6071 5978 1565 197 0 36 chr10 7238892 7239201 -138350087 + AluJb SINE Alu 1 298 -14 979 69 15 0 chr10 7240354 7240485 -138348803 + L1MA3 LINE L1 6173 6305 0 2001 131 10 17 chr10 7240641 7240939 -138348349 - AluSx SINE Alu -16 296 1 339 25 0 0 chr10 7240941 7240981 -138348307 + (TTA)n Simple_repeat Simple_repeat 2 41 0 1818 103 9 125 chr10 7240981 7241302 -138347986 - AluSx SINE Alu -18 284 1 2794 150 2 28 chr10 7241443 7241584 -138347704 + L1PB3 LINE L1 5694 5837 -317 2365 73 0 45 chr10 7241584 7241897 -138347391 - AluY SINE Alu -11 300 2 2794 150 2 28 chr10 7241897 7242221 -138347067 + L1PB3 LINE L1 5837 6147 -7 204 97 0 0 chr10 7242708 7242739 -138346549 + (A)n Simple_repeat Simple_repeat 1 31 0 1747 176 3 14 chr10 7242740 7243035 -138346253 - AluJo SINE Alu -9 303 12 435 280 140 29 chr10 7243879 7244086 -138345202 + MIR SINE MIR 20 249 -13 2458 87 0 0 chr10 7244373 7244671 -138344617 - AluSx SINE Alu -14 298 1 263 103 0 0 chr10 7245239 7245278 -138344010 + L1MA9 LINE L1 6274 6312 0 26 50 0 0 chr10 7245342 7245382 -138343906 + AT_rich Low_complexity Low_complexity 1 40 0 330 282 122 20 chr10 7245715 7245960 -138343328 - L2 LINE L2 -358 2956 2687 * 621 294 50 5 chr10 7245957 7246178 -138343110 + L2 LINE L2 1879 2109 -1205 191 318 11 34 chr10 7246971 7247059 -138342229 + MIR SINE MIR 103 188 -74 192 77 0 0 chr10 7248052 7248078 -138341210 + (GAA)n Simple_repeat Simple_repeat 2 27 0 907 185 38 12 chr10 7248308 7248542 -138340746 - L1MA6 LINE L1 -6 6294 6034 1066 151 5 21 chr10 7249117 7249309 -138339979 - MER5A DNA MER1_type 0 189 1 1088 164 31 62 chr10 7249498 7249724 -138339564 + MER20 DNA MER1_type 1 219 0 207 0 0 0 chr10 7250612 7250635 -138338653 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 999 209 70 42 chr10 7250807 7251162 -138338126 - L1MC5 LINE L1 -265 7696 7332 2259 78 0 11 chr10 7251184 7251503 -138337785 - AluY SINE Alu 0 316 1 2275 104 0 41 chr10 7251503 7251820 -138337468 - AluSx SINE Alu -8 304 1 1665 202 0 22 chr10 7252643 7252838 -138336450 - AluJo SINE Alu -2 310 123 315 0 0 0 chr10 7252838 7252873 -138336415 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 1665 202 0 22 chr10 7252873 7252994 -138336294 - AluJo SINE Alu -189 123 1 316 312 88 2 chr10 7253078 7253215 -138336073 - MIR3 SINE MIR -52 156 9 196 278 93 86 chr10 7253749 7253815 -138335473 - L3 LINE CR1 -352 1225 1161 2096 154 0 0 chr10 7253815 7254114 -138335174 + AluJb SINE Alu 1 299 -13 196 278 93 86 chr10 7254114 7254198 -138335090 - L3 LINE CR1 -416 1161 1074 579 228 15 95 chr10 7254304 7254567 -138334721 - L1MC5 LINE L1 -48 7913 7672 211 287 138 21 chr10 7254815 7254909 -138334379 + MIR SINE MIR 30 134 -74 2619 40 0 3 chr10 7255134 7255434 -138333854 - AluY SINE Alu -12 299 1 189 380 58 16 chr10 7255475 7255717 -138333571 + L2 LINE L2 938 1189 -2125 225 125 0 0 chr10 7255886 7255918 -138333370 + MER63 DNA MER1_type 701 732 -328 864 108 7 50 chr10 7255922 7256061 -138333227 - FLAM_C SINE Alu 0 143 11 251 237 0 0 chr10 7256088 7256147 -138333141 + MER63 DNA MER1_type 968 1026 -35 347 302 128 54 chr10 7256287 7256731 -138332557 + L2 LINE L2 1563 2039 -1275 845 88 35 0 chr10 7256898 7257012 -138332276 - AluY SINE Alu -193 118 1 318 295 269 0 chr10 7257122 7257278 -138332010 + MIR SINE MIR 65 262 0 1807 145 13 30 chr10 7257500 7257804 -138331484 + AluSq SINE Alu 1 299 -14 37268 73 7 6 chr10 7258134 7263735 -138325553 + L1P2 LINE L1 175 5779 -375 1167 49 7 14 chr10 7263735 7263877 -138325411 + AluY SINE Alu 5 145 -166 691 197 48 21 chr10 7264025 7264213 -138325075 + LTR41 LTR ERVL 1 193 -580 378 237 128 83 chr10 7264471 7264725 -138324563 + LTR41 LTR ERVL 510 795 0 425 347 12 12 chr10 7265022 7265189 -138324099 - MIR SINE MIR -93 169 3 * 442 302 116 39 chr10 7265189 7265416 -138323872 - MIR SINE MIR -16 246 2 224 26 0 79 chr10 7265623 7265661 -138323627 + (CCCTAA)n Simple_repeat Simple_repeat 6 40 0 659 96 19 0 chr10 7266778 7266882 -138322406 + (GAAA)n Simple_repeat Simple_repeat 1 106 0 238 250 0 0 chr10 7267868 7267920 -138321368 - MER81 DNA DNA 0 114 63 2192 136 72 37 chr10 7267920 7268348 -138320940 - MSTB2 LTR MaLR 0 457 15 407 147 0 0 chr10 7268349 7268417 -138320871 - MER81 DNA DNA -45 69 2 225 108 0 0 chr10 7318812 7318849 -138270439 + (CA)n Simple_repeat Simple_repeat 2 38 0 181 273 0 0 chr10 7319591 7319635 -138269653 - L2 LINE L2 -20 3293 3250 689 141 0 0 chr10 7319976 7320075 -138269213 + AluJb SINE Alu 24 122 -190 1779 141 6 69 chr10 7320082 7320402 -138268886 - AluSq SINE Alu -13 300 1 1255 132 10 10 chr10 7320402 7320599 -138268689 - MSTB LTR MaLR -229 197 1 216 0 0 0 chr10 7321058 7321082 -138268206 + (A)n Simple_repeat Simple_repeat 1 24 0 1416 116 37 0 chr10 7321412 7321627 -138267661 + L1PA11 LINE L1 5950 6172 -2 2463 142 55 0 chr10 7322408 7322810 -138266478 + MSTB1 LTR MaLR 9 432 0 4069 177 49 27 chr10 7323344 7324302 -138264986 + L1MB7 LINE L1 5197 6168 -16 1841 110 59 0 chr10 7324310 7324564 -138264724 + AluSx SINE Alu 1 269 -43 2262 98 0 14 chr10 7324763 7325059 -138264229 - AluY SINE Alu -19 292 1 569 277 51 38 chr10 7325215 7325507 -138263781 + L1MCc LINE L1 24 319 -6104 304 109 0 0 chr10 7325871 7325917 -138263371 + AluSx SINE Alu 252 297 -4 227 299 15 15 chr10 7327497 7327564 -138261724 + MIR3 SINE MIR 118 184 -24 378 212 18 0 chr10 7328031 7328196 -138261092 + (CA)n Simple_repeat Simple_repeat 2 169 0 268 211 8 8 chr10 7328210 7328333 -138260955 + (CA)n Simple_repeat Simple_repeat 1 123 0 242 226 24 0 chr10 7328403 7328571 -138260717 + (CA)n Simple_repeat Simple_repeat 2 173 0 2067 119 4 0 chr10 7329132 7329433 -138259855 + AluSx SINE Alu 5 306 0 21 0 0 0 chr10 7329826 7329847 -138259441 + AT_rich Low_complexity Low_complexity 1 21 0 255 180 180 82 chr10 7329923 7330045 -138259243 - L1ME LINE L1 -490 5631 5498 2081 119 7 7 chr10 7330460 7330755 -138258533 + AluSx SINE Alu 5 299 -13 192 40 0 0 chr10 7330910 7330935 -138258353 + (TTTG)n Simple_repeat Simple_repeat 2 26 0 2147 104 3 3 chr10 7330944 7331232 -138258056 - AluSx SINE Alu -24 288 1 342 275 53 47 chr10 7332128 7332299 -138256989 + L3 LINE CR1 1227 1398 -179 470 263 67 52 chr10 7332339 7332368 -138256920 - MLT1J2 LTR MaLR -14 436 409 2472 98 30 11 chr10 7332368 7332736 -138256552 - THE1C LTR MaLR 0 375 1 470 263 67 52 chr10 7332736 7332900 -138256388 - MLT1J2 LTR MaLR -41 409 240 217 154 0 0 chr10 7333337 7333376 -138255912 + L3 LINE CR1 1524 1562 -15 972 149 23 0 chr10 7333807 7333981 -138255307 - L1P LINE L1 -801 5345 5168 25 51 0 0 chr10 7335357 7335396 -138253892 + AT_rich Low_complexity Low_complexity 1 39 0 300 215 52 7 chr10 7335432 7335567 -138253721 + (TA)n Simple_repeat Simple_repeat 1 141 0 1474 225 57 15 chr10 7336363 7336735 -138252553 + MLT2D LTR ERVL 1 480 -40 322 266 78 42 chr10 7336776 7336914 -138252374 + L1MC4a LINE L1 5684 5832 -1976 2058 168 31 20 chr10 7336914 7337272 -138252016 + THE1B LTR MaLR 1 362 -2 322 266 78 42 chr10 7337272 7337325 -138251963 + L1MC4a LINE L1 5832 5882 -1926 2004 105 0 4 chr10 7337766 7338042 -138251246 + L1PB2 LINE L1 5829 6103 -48 1690 175 0 20 chr10 7338043 7338335 -138250953 + AluJo SINE Alu 1 286 -26 384 132 0 0 chr10 7338358 7338426 -138250862 + L1PB3 LINE L1 6086 6153 -1 687 192 66 12 chr10 7338492 7338659 -138250629 + Cheshire DNA MER1_type 1589 1764 -656 2010 173 14 6 chr10 7338810 7339157 -138250131 - MLT1A1 LTR MaLR -13 352 3 1865 114 110 0 chr10 7339595 7339876 -138249412 + AluSx SINE Alu 1 312 0 2095 146 55 22 chr10 7340947 7341310 -138247978 + THE1C LTR MaLR 1 375 0 615 198 72 24 chr10 7341874 7342041 -138247247 + MLT1B LTR MaLR 1 175 -215 2199 101 3 3 chr10 7342046 7342332 -138246956 + AluSg SINE Alu 1 286 -24 468 356 20 7 chr10 7342465 7342788 -138246500 + AluSq SINE Alu 5 331 0 1052 173 47 135 chr10 7342801 7343119 -138246169 + MLT1C LTR MaLR 178 467 0 234 302 91 65 chr10 7343571 7343968 -138245320 + L2 LINE L2 2833 3239 -33 228 163 0 0 chr10 7344235 7344278 -138245010 + (TGAA)n Simple_repeat Simple_repeat 3 45 0 386 288 49 43 chr10 7344333 7344496 -138244792 + MIR3 SINE MIR 30 193 -15 1221 180 0 14 chr10 7345067 7345278 -138244010 + AluJo SINE Alu 5 212 -100 688 201 107 44 chr10 7345283 7345442 -138243846 + AluJo SINE Alu 109 277 -35 180 0 0 0 chr10 7345450 7345470 -138243818 + (T)n Simple_repeat Simple_repeat 1 20 0 803 183 20 20 chr10 7345843 7345996 -138243292 + FRAM SINE Alu 10 162 -14 337 311 24 36 chr10 7346014 7346181 -138243107 + MIR SINE MIR 53 217 -45 407 302 16 16 chr10 7347556 7347682 -138241606 + MIR SINE MIR 112 237 -25 2494 83 0 3 chr10 7347811 7348124 -138241164 - AluSp SINE Alu -1 312 1 537 295 93 51 chr10 7349895 7349921 -138239367 + MIR SINE MIR 2 25 -237 2192 76 29 0 chr10 7349921 7350231 -138239057 - AluSg SINE Alu 0 318 1 537 295 93 51 chr10 7350231 7350439 -138238849 + MIR SINE MIR 25 248 -14 243 317 30 20 chr10 7350818 7350919 -138238369 - MIR SINE MIR -64 198 97 2049 95 0 130 chr10 7350959 7351306 -138237982 + AluSx SINE Alu 1 302 0 441 307 50 20 chr10 7351381 7351583 -138237705 - MLT1I LTR MaLR -2 407 200 436 337 137 49 chr10 7351677 7352101 -138237187 - L2 LINE L2 -89 3183 2733 210 336 67 8 chr10 7353637 7353756 -138235532 - MIR SINE MIR -123 139 14 * 255 303 17 59 chr10 7353686 7353805 -138235483 + MIR SINE MIR 39 152 -110 206 290 29 0 chr10 7355103 7355172 -138234116 + MIR3 SINE MIR 105 175 -33 187 383 32 11 chr10 7355312 7355406 -138233882 - MIR3 SINE MIR -105 103 8 236 143 24 95 chr10 7355417 7355501 -138233787 - Charlie7 DNA MER1_type -36 2576 2499 2493 239 103 22 chr10 7355573 7356514 -138232774 - Charlie7 DNA MER1_type -94 2518 1479 287 261 185 60 chr10 7356532 7356716 -138232572 - Charlie7 DNA MER1_type -2272 340 134 791 172 16 0 chr10 7356732 7356860 -138232428 + AluJo SINE Alu 5 134 -178 13395 127 92 5 chr10 7356864 7356910 -138232378 - L1PBa LINE L1 -3175 3687 3646 1972 141 13 16 chr10 7356910 7357222 -138232066 - AluSx SINE Alu -1 311 1 13395 127 92 5 chr10 7357222 7359984 -138229304 - L1PBa LINE L1 -3216 3646 634 960 191 21 0 chr10 7359984 7360178 -138229110 - L1PBa LINE L1 -6663 200 3 1952 70 0 0 chr10 7360191 7360434 -138228854 - L1P4 LINE L1 -469 5692 5450 366 301 103 14 chr10 7362147 7362293 -138226995 - MIR3 SINE MIR -10 198 40 196 279 51 25 chr10 7362878 7362957 -138226331 - L3b LINE CR1 -249 1334 1254 1888 183 16 35 chr10 7363046 7363418 -138225870 + MLT1A1 LTR MaLR 1 365 0 244 365 77 48 chr10 7363424 7363734 -138225554 - L2 LINE L2 -15 3257 2939 3009 80 0 0 chr10 7364206 7364579 -138224709 - L1PA13 LINE L1 -2 6161 5789 318 40 0 100 chr10 7364586 7364636 -138224652 - L1PA8A LINE L1 -314 5817 5773 468 105 0 0 chr10 7365117 7365193 -138224095 + (TC)n Simple_repeat Simple_repeat 1 76 0 645 10 0 134 chr10 7366615 7366712 -138222576 + L1PA2 LINE L1 15 98 -6048 * 38273 32 24 1 chr10 7366710 7372118 -138217170 + L1PA2 LINE L1 623 6155 0 2015 144 0 0 chr10 7372893 7373192 -138216096 - AluSx SINE Alu -13 299 1 199 331 41 50 chr10 7373993 7374114 -138215174 + L2 LINE L2 3153 3272 0 2252 121 0 0 chr10 7375685 7375991 -138213297 - AluSx SINE Alu -6 306 1 625 264 19 0 chr10 7376023 7376182 -138213106 + MIR SINE MIR 50 211 -51 183 265 0 20 chr10 7376682 7376731 -138212557 + L2 LINE L2 2988 3035 -237 309 206 41 0 chr10 7377766 7377839 -138211449 + MER103 DNA DNA 2 77 -89 2690 40 0 0 chr10 7378229 7378530 -138210758 + AluY SINE Alu 1 301 -10 2032 121 28 0 chr10 7378576 7378865 -138210423 + AluSx SINE Alu 1 297 -15 242 71 0 24 chr10 7379223 7379265 -138210023 + (ATG)n Simple_repeat Simple_repeat 3 43 0 1587 206 0 3 chr10 7379289 7379576 -138209712 - AluJo SINE Alu -26 286 1 424 217 43 2 chr10 7379628 7379804 -138209484 + LTR16A1 LTR ERVL 246 457 0 2156 99 34 0 chr10 7380141 7380433 -138208855 - AluSg SINE Alu -8 302 1 339 297 78 31 chr10 7380738 7380866 -138208422 - L2 LINE L2 0 3272 3139 531 251 149 14 chr10 7381395 7381610 -138207678 + MIR SINE MIR 13 256 -6 478 266 12 73 chr10 7381584 7381832 -138207456 - L2 LINE L2 0 3313 3081 * 185 244 24 0 chr10 7381886 7381927 -138207361 + MIR SINE MIR 218 259 -3 251 329 0 0 chr10 7382793 7382869 -138206419 + MIR SINE MIR 79 154 -108 375 23 0 0 chr10 7383125 7383169 -138206119 + (TG)n Simple_repeat Simple_repeat 2 45 0 387 264 0 21 chr10 7383169 7383279 -138206009 + L1ME3A LINE L1 5760 5866 -298 754 257 105 34 chr10 7383823 7384298 -138204990 + L1M4 LINE L1 4390 4898 -1248 1356 159 42 85 chr10 7384492 7384775 -138204513 - AluJo SINE Alu -35 277 7 256 303 211 13 chr10 7385800 7385952 -138203336 - MIR SINE MIR -61 201 20 886 164 26 0 chr10 7386797 7386949 -138202339 + FRAM SINE Alu 1 155 -21 328 185 62 0 chr10 7387034 7387099 -138202189 + AluJ/FRAM SINE Alu 232 300 -2 201 365 111 8 chr10 7391528 7391654 -138197634 - MIR3 SINE MIR -53 155 17 2104 114 0 3 chr10 7391981 7392280 -138197008 + AluSx SINE Alu 1 298 -14 243 0 0 0 chr10 7392285 7392312 -138196976 + (CAAA)n Simple_repeat Simple_repeat 3 29 0 1671 166 17 7 chr10 7393266 7393568 -138195720 + AluJo SINE Alu 1 305 -7 347 73 18 0 chr10 7393908 7393963 -138195325 + (CA)n Simple_repeat Simple_repeat 2 57 0 186 43 0 0 chr10 7395227 7395250 -138194038 + (TTCTG)n Simple_repeat Simple_repeat 5 27 0 278 375 19 0 chr10 7395353 7395457 -138193831 - MIR SINE MIR -64 144 39 401 223 40 68 chr10 7395630 7395778 -138193510 - L2 LINE L2 0 3313 3170 1377 71 0 0 chr10 7397064 7397234 -138192054 + AluSq SINE Alu 126 295 -18 2047 133 0 9 chr10 7398104 7398419 -138190869 - AluSx SINE Alu 0 312 1 1829 250 54 32 chr10 7399171 7399820 -138189468 + L1MDa LINE L1 11 673 -5867 333 294 49 11 chr10 7399833 7400017 -138189271 + L1MDa LINE L1 725 915 -5625 630 242 60 64 chr10 7402025 7402350 -138186938 + MLT1B LTR MaLR 40 384 -6 258 304 43 35 chr10 7403048 7403163 -138186125 + MIR3 SINE MIR 81 196 -12 212 0 36 0 chr10 7404096 7404124 -138185164 + (TG)n Simple_repeat Simple_repeat 2 30 0 1387 213 41 46 chr10 7406573 7406740 -138182548 + MLT1B LTR MaLR 4 170 -220 1339 202 26 10 chr10 7406740 7407042 -138182246 + AluJo SINE Alu 5 311 -1 1387 213 41 46 chr10 7407042 7407263 -138182025 + MLT1B LTR MaLR 170 390 0 252 59 0 0 chr10 7408545 7408579 -138180709 + (A)n Simple_repeat Simple_repeat 1 34 0 591 258 150 41 chr10 7409187 7409277 -138180011 + LTR16A LTR ERVL 16 95 -355 1853 126 0 54 chr10 7409277 7409594 -138179694 - AluSx SINE Alu -12 300 1 591 258 150 41 chr10 7409594 7409844 -138179444 + LTR16A LTR ERVL 95 393 -57 362 239 23 0 chr10 7410001 7410089 -138179199 + L1MC4 LINE L1 6498 6587 -1455 294 167 19 0 chr10 7410111 7410165 -138179123 + MER68 LTR ERV1 5 59 -503 1766 106 0 4 chr10 7410166 7410412 -138178876 + AluSc SINE Alu 53 297 -12 548 158 24 4 chr10 7410415 7410582 -138178706 + MER46A DNA MER2_type 1 236 0 274 212 30 0 chr10 7410582 7410648 -138178640 + L1MC4 LINE L1 7842 7909 -133 1929 125 30 0 chr10 7411198 7411493 -138177795 - AluSq SINE Alu -9 304 1 3556 26 2 0 chr10 7411617 7412032 -138177256 + L1PA4 LINE L1 5737 6152 -3 2124 141 33 33 chr10 7413344 7413707 -138175581 + THE1B LTR MaLR 1 363 -1 428 171 0 11 chr10 7415543 7415631 -138173657 + (CATA)n Simple_repeat Simple_repeat 2 88 0 841 152 15 0 chr10 7415633 7415765 -138173523 - AluJo SINE Alu -177 135 2 449 259 42 36 chr10 7419950 7419961 -138169327 + L2 LINE L2 1728 1737 -1577 2253 122 39 28 chr10 7419961 7420321 -138168967 + THE1B LTR MaLR 1 364 0 449 259 42 36 chr10 7420321 7420475 -138168813 + L2 LINE L2 1737 1894 -1420 528 311 82 37 chr10 7420540 7420967 -138168321 + L2 LINE L2 2634 3305 -8 195 337 141 0 chr10 7425743 7425835 -138163453 + L2 LINE L2 3209 3313 0 671 337 36 36 chr10 7427336 7427802 -138161486 - L1ME3A LINE L1 -290 5880 5415 1225 96 0 0 chr10 7427923 7428080 -138161208 + AluSx SINE Alu 9 165 -147 277 167 0 0 chr10 7428082 7428130 -138161158 + AluSp/q SINE Alu 250 297 -6 1969 155 0 0 chr10 7428131 7428435 -138160853 - AluSx SINE Alu -8 304 1 960 194 22 0 chr10 7430354 7430534 -138158754 + MER5A DNA MER1_type 2 185 -4 321 268 107 18 chr10 7431131 7431243 -138158045 - MIR SINE MIR -66 142 21 1997 117 0 20 chr10 7432873 7433172 -138156116 - AluSx SINE Alu -19 293 1 2025 92 4 0 chr10 7433770 7434043 -138155245 + AluSq SINE Alu 24 297 -16 1266 180 22 73 chr10 7434229 7434546 -138154742 - AluJb SINE Alu -11 301 1 198 0 0 0 chr10 7435199 7435221 -138154067 + (CAAAAA)n Simple_repeat Simple_repeat 2 23 0 1462 192 7 2 chr10 7436099 7436543 -138152745 + AluJo SINE Alu 1 218 -94 1089 216 13 4 chr10 7436316 7436543 -138152745 + AluJb SINE Alu 84 436 -46 660 115 25 8 chr10 7436543 7436665 -138152623 + GA-rich Low_complexity Low_complexity 1 124 0 1089 216 13 4 chr10 7436665 7436713 -138152575 + AluJb SINE Alu 436 482 0 2116 92 0 4 chr10 7437596 7437867 -138151421 + AluSq SINE Alu 39 308 -5 259 91 0 0 chr10 7438461 7438494 -138150794 + U2 snRNA snRNA 1 33 -155 776 243 75 25 chr10 7438619 7438899 -138150389 + L1MC4a LINE L1 5736 6029 -1779 195 69 0 0 chr10 7439961 7439990 -138149298 + (CAAAAA)n Simple_repeat Simple_repeat 3 31 0 510 221 131 14 chr10 7440145 7440290 -138148998 - MIR SINE MIR -72 190 29 3823 53 2 0 chr10 7441959 7442408 -138146880 + L1PA8 LINE L1 5717 6166 -6 1896 138 17 17 chr10 7444295 7444592 -138144696 + AluJb SINE Alu 1 297 -15 312 289 115 19 chr10 7445191 7445347 -138143941 - MIR SINE MIR -67 195 25 2294 148 11 0 chr10 7445393 7445744 -138143544 + THE1A LTR MaLR 1 355 0 1289 192 40 14 chr10 7446259 7446535 -138142753 + L1MB3 LINE L1 5899 6181 -2 332 250 26 0 chr10 7449881 7449957 -138139331 + L2 LINE L2 3234 3311 -2 2026 96 0 0 chr10 7450000 7450260 -138139028 - AluY SINE Alu -9 302 43 207 127 48 0 chr10 7450378 7450441 -138138847 + (TA)n Simple_repeat Simple_repeat 1 66 0 23 78 0 0 chr10 7450709 7450760 -138138528 + AT_rich Low_complexity Low_complexity 1 51 0 85 47 0 0 chr10 7450840 7450967 -138138321 + AT_rich Low_complexity Low_complexity 1 127 0 443 100 0 0 chr10 7451075 7451135 -138138153 + Alu SINE Alu 244 303 -8 232 233 29 29 chr10 7451195 7451298 -138137990 + T-rich Low_complexity Low_complexity 2 104 0 532 231 41 81 chr10 7451318 7451539 -138137749 - L1ME1 LINE L1 -20 6080 5869 935 234 65 27 chr10 7451621 7451882 -138137406 - L1ME1 LINE L1 -231 5869 5599 1136 200 5 0 chr10 7451884 7452089 -138137199 - MLT1B LTR MaLR 0 390 185 1932 123 49 7 chr10 7452219 7452503 -138136785 - AluSg SINE Alu -14 296 1 1121 146 0 0 chr10 7452507 7452678 -138136610 - MLT1B LTR MaLR -219 171 1 1451 231 33 3 chr10 7452695 7452998 -138136290 - L1ME1 LINE L1 -529 5571 5260 691 219 120 9 chr10 7453037 7453289 -138135999 - L1ME1 LINE L1 -5035 1045 772 752 233 33 11 chr10 7453293 7453473 -138135815 - MER5A DNA MER1_type -5 184 1 1999 256 40 75 chr10 7453487 7454269 -138135019 - L1ME1 LINE L1 -5307 763 10 27 0 0 0 chr10 7454269 7454296 -138134992 + AT_rich Low_complexity Low_complexity 1 27 0 607 271 21 0 chr10 7455660 7455804 -138133484 + L1ME LINE L1 351 497 -5573 733 199 283 22 chr10 7456272 7456548 -138132740 + MER7A DNA MER2_type 1 346 0 26 0 0 0 chr10 7457912 7457938 -138131350 + AT_rich Low_complexity Low_complexity 1 26 0 773 146 7 0 chr10 7458220 7458357 -138130931 + CT-rich Low_complexity Low_complexity 2 139 0 874 47 9 0 chr10 7458846 7458953 -138130335 + AluSg1 SINE Alu 1 108 -201 2178 121 7 0 chr10 7459112 7459417 -138129871 - AluSg SINE Alu -3 307 1 23 0 0 0 chr10 7459418 7459441 -138129847 + AT_rich Low_complexity Low_complexity 1 23 0 279 276 25 107 chr10 7459910 7460053 -138129235 + MIR3 SINE MIR 21 145 -63 2055 129 3 13 chr10 7460053 7460364 -138128924 + AluSg SINE Alu 3 310 0 279 276 25 107 chr10 7460364 7460416 -138128872 + MIR3 SINE MIR 145 200 -8 407 285 166 51 chr10 7461649 7462179 -138127109 + L1ME4a LINE L1 5526 6116 -5 264 368 22 22 chr10 7462523 7462705 -138126583 + L1ME LINE L1 5420 5601 -520 316 321 219 33 chr10 7464102 7464526 -138124762 + L1MEd LINE L1 64 566 -5553 376 259 17 52 chr10 7464531 7464647 -138124641 - L2 LINE L2 -3 3310 3199 589 272 173 33 chr10 7465126 7465844 -138123444 - L2 LINE L2 0 3313 2456 203 147 0 0 chr10 7467023 7467057 -138122231 + (CCA)n Simple_repeat Simple_repeat 2 35 0 288 311 11 11 chr10 7467445 7467535 -138121753 + MIR3 SINE MIR 98 187 -21 1096 281 121 43 chr10 7467561 7468281 -138121007 - L1MC4a LINE L1 -1640 6168 5393 2600 108 8 22 chr10 7468441 7468810 -138120478 + THE1B LTR MaLR 1 364 0 29 0 0 0 chr10 7469109 7469138 -138120150 + AT_rich Low_complexity Low_complexity 1 29 0 280 252 2 63 chr10 7469873 7469972 -138119316 + MIR SINE MIR 41 133 -75 188 304 82 52 chr10 7471917 7472052 -138117236 + L2 LINE L2 3133 3271 -1 363 231 45 52 chr10 7472659 7472793 -138116495 + L2 LINE L2 3094 3226 -87 358 297 27 9 chr10 7473083 7473194 -138116094 - MIR3 SINE MIR -82 126 14 21 57 0 0 chr10 7473482 7473517 -138115771 + AT_rich Low_complexity Low_complexity 1 35 0 2379 98 0 0 chr10 7473950 7474255 -138115033 + AluSg SINE Alu 1 305 -5 2288 122 0 0 chr10 7474616 7474928 -138114360 - AluSx SINE Alu 0 312 1 941 141 0 0 chr10 7475390 7475525 -138113763 - AluJo SINE Alu -177 135 1 4421 140 64 1 chr10 7477626 7478326 -138110962 - L1PA16 LINE L1 0 6166 5423 788 150 41 0 chr10 7478526 7478673 -138110615 + L1MA4 LINE L1 6145 6297 -3 2057 130 0 0 chr10 7478705 7478990 -138110298 + AluSg SINE Alu 1 285 -25 2591 235 81 33 chr10 7480264 7481031 -138108257 + MER21B LTR ERV1 9 812 -51 2292 78 0 27 chr10 7482051 7482346 -138106942 + AluSc SINE Alu 1 287 -22 907 186 136 0 chr10 7483321 7483520 -138105768 + MER46A DNA MER2_type 11 236 0 408 280 32 24 chr10 7483629 7483754 -138105534 - MIR SINE MIR -132 130 5 1682 119 4 0 chr10 7484381 7484605 -138104683 + AluSx SINE Alu 60 287 -25 303 28 0 0 chr10 7484605 7484641 -138104647 + (GGGGA)n Simple_repeat Simple_repeat 5 40 0 1682 119 4 0 chr10 7484641 7484660 -138104628 + AluSx SINE Alu 287 304 -8 1791 168 14 3 chr10 7485457 7485749 -138103539 - AluJb SINE Alu -17 295 1 772 196 61 37 chr10 7486934 7487148 -138102140 - MER20 DNA MER1_type 0 219 1 642 288 106 30 chr10 7487774 7488181 -138101107 - MLT1L LTR MaLR -32 583 146 2114 105 3 7 chr10 7490745 7491058 -138098230 - AluSx SINE Alu 0 312 1 189 107 0 0 chr10 7492444 7492472 -138096816 + (A)n Simple_repeat Simple_repeat 1 28 0 363 44 0 0 chr10 7492651 7492696 -138096592 + (TCCC)n Simple_repeat Simple_repeat 1 45 0 326 105 0 18 chr10 7492838 7492895 -138096393 + (TCCC)n Simple_repeat Simple_repeat 1 56 0 2020 125 3 0 chr10 7492895 7493182 -138096106 - AluSx SINE Alu -24 288 1 405 278 99 68 chr10 7493493 7493764 -138095524 - L2 LINE L2 -7 3306 3045 2459 94 0 0 chr10 7493764 7494071 -138095217 - AluSx SINE Alu -5 307 1 405 278 99 68 chr10 7494071 7494539 -138094749 - L2 LINE L2 -268 3045 2488 1899 203 104 38 chr10 7494539 7495066 -138094222 + MER68 LTR ERV1 1 562 0 405 278 99 68 chr10 7495066 7495120 -138094168 - L2 LINE L2 -825 2488 2437 718 153 0 0 chr10 7495125 7495236 -138094052 - AluSx SINE Alu -8 304 194 816 85 0 9 chr10 7495237 7495343 -138093945 - AluSx SINE Alu -172 141 37 2427 88 0 0 chr10 7496197 7496492 -138092796 - AluSx SINE Alu -17 295 1 447 19 0 0 chr10 7497389 7497441 -138091847 + (TG)n Simple_repeat Simple_repeat 2 53 0 21 0 0 0 chr10 7497509 7497530 -138091758 + AT_rich Low_complexity Low_complexity 1 21 0 965 255 109 26 chr10 7497677 7498100 -138091188 + MLT1C LTR MaLR 6 463 -4 2103 117 7 26 chr10 7498684 7498993 -138090295 + AluSx SINE Alu 1 303 -9 248 286 133 0 chr10 7499034 7499132 -138090156 - L2 LINE L2 -3 3310 3200 2297 114 57 20 chr10 7499336 7499687 -138089601 - THE1B LTR MaLR 0 364 1 443 308 115 40 chr10 7499875 7500248 -138089040 + HAL1 LINE L1 8 408 -2099 424 188 51 68 chr10 7500292 7500409 -138088879 + HAL1 LINE L1 580 694 -1813 2198 101 0 10 chr10 7500485 7500773 -138088515 - AluSx SINE Alu -23 289 5 316 258 22 0 chr10 7500788 7500877 -138088411 + HAL1 LINE L1 1556 1646 -861 2274 73 23 7 chr10 7501159 7501461 -138087827 - L1PA5 LINE L1 -6 6148 5842 2702 48 0 0 chr10 7501464 7501780 -138087508 + L1PA5 LINE L1 5496 5811 -343 794 161 8 0 chr10 7501886 7502016 -138087272 + AluJo SINE Alu 1 131 -171 2338 114 56 8 chr10 7502029 7502387 -138086901 + THE1C LTR MaLR 1 375 0 943 199 0 0 chr10 7502390 7502551 -138086737 + AluJo SINE Alu 137 297 -5 274 284 0 14 chr10 7503142 7503216 -138086072 + GA-rich Low_complexity Low_complexity 2 74 0 2125 130 3 0 chr10 7504215 7504507 -138084781 - AluSc SINE Alu -16 293 1 1528 104 75 90 chr10 7506515 7506794 -138082494 + AluSq SINE Alu 39 313 0 1532 196 91 6 chr10 7507623 7507964 -138081324 + MLT1A2 LTR MaLR 1 370 -4 1798 178 0 16 chr10 7508640 7508944 -138080344 + AluJb SINE Alu 1 299 -13 1340 172 17 4 chr10 7509526 7509764 -138079524 - AluJb SINE Alu -8 304 64 195 283 151 13 chr10 7510736 7510888 -138078400 + MIR SINE MIR 87 259 -3 524 200 8 0 chr10 7511083 7511208 -138078080 + (TGGA)n Simple_repeat Simple_repeat 3 128 0 185 0 40 0 chr10 7513658 7513683 -138075605 + (CAAAA)n Simple_repeat Simple_repeat 2 27 0 1637 177 55 6 chr10 7514146 7514473 -138074815 - MER2 DNA MER2_type -1 343 1 2677 33 7 0 chr10 7514759 7515060 -138074228 - AluY SINE Alu -8 303 1 1534 115 165 27 chr10 7516430 7516691 -138072597 + AluSg SINE Alu 1 297 -3 1795 149 30 33 chr10 7518235 7518536 -138070752 + AluJo SINE Alu 1 300 -12 237 326 74 0 chr10 7519747 7519842 -138069446 - HAL1 LINE L1 -2387 120 19 1784 108 115 0 chr10 7520420 7520680 -138068608 + AluSx SINE Alu 5 294 -18 939 88 64 0 chr10 7520761 7520886 -138068402 - AluSg/x SINE Alu -35 275 143 1478 113 0 0 chr10 7520886 7521080 -138068208 - AluSx SINE Alu -118 194 1 417 286 97 7 chr10 7521099 7521253 -138068035 - L2 LINE L2 -784 2530 2363 375 78 0 0 chr10 7521373 7521424 -138067864 + (TC)n Simple_repeat Simple_repeat 1 51 0 407 217 0 0 chr10 7522151 7522234 -138067054 - L2 LINE L2 -1297 2017 1935 1419 194 44 106 chr10 7524341 7524775 -138064513 + MLT2D LTR ERVL 1 407 -7 387 312 34 29 chr10 7524977 7525182 -138064106 + MIR SINE MIR 43 248 -14 207 114 0 0 chr10 7525221 7525256 -138064032 + (GGA)n Simple_repeat Simple_repeat 1 35 0 705 230 0 0 chr10 7526309 7526487 -138062801 + (TG)n Simple_repeat Simple_repeat 1 178 0 1017 121 0 7 chr10 7526610 7526750 -138062538 + AluSq/x SINE Alu 1 139 -173 305 155 0 17 chr10 7526750 7526797 -138062491 + L1P LINE L1 2667 2714 -3432 5950 65 5 100 chr10 7526797 7527998 -138061290 + L1PA8A LINE L1 5021 6129 -2 198 352 28 9 chr10 7528335 7528443 -138060845 + L2 LINE L2 3163 3272 0 246 136 0 0 chr10 7531173 7531217 -138058071 + (GA)n Simple_repeat Simple_repeat 2 45 0 2467 121 8 8 chr10 7531787 7532151 -138057137 + THE1B LTR MaLR 1 364 0 1600 184 54 32 chr10 7533922 7534238 -138055050 + MER58B DNA MER1_type 19 341 0 229 317 0 20 chr10 7534382 7534483 -138054805 + A-rich Low_complexity Low_complexity 2 100 0 1108 288 69 37 chr10 7534762 7535608 -138053680 + L1M4 LINE L1 4373 5245 -901 1246 224 16 32 chr10 7535754 7536067 -138053221 + AluJo SINE Alu 1 308 -4 279 256 44 11 chr10 7536589 7536679 -138052609 + L1M LINE L1 5318 5410 -754 1047 217 7 8 chr10 7536679 7536924 -138052364 + MLT2B1 LTR ERVL 3 241 -173 293 235 188 0 chr10 7537116 7537201 -138052087 + MLT1J2 LTR MaLR 189 289 -161 900 233 33 14 chr10 7537602 7537817 -138051471 - MER20 DNA MER1_type 0 219 1 2263 85 7 4 chr10 7538445 7538775 -138050513 + AluSq SINE Alu 1 331 0 2075 53 0 8 chr10 7539658 7539920 -138049368 + L1PA5 LINE L1 5892 6151 -3 265 163 62 0 chr10 7540838 7540918 -138048370 + (TATAA)n Simple_repeat Simple_repeat 2 86 0 1404 179 39 0 chr10 7541056 7541290 -138047998 - AluJb SINE Alu -69 243 1 216 0 0 0 chr10 7541307 7541331 -138047957 + (TTTTTG)n Simple_repeat Simple_repeat 1 24 0 801 138 8 8 chr10 7541334 7541464 -138047824 - FLAM_C SINE Alu -3 130 1 1986 132 0 0 chr10 7542307 7542580 -138046708 + AluSx SINE Alu 1 273 -39 180 152 0 0 chr10 7542581 7542614 -138046674 + GA-rich Low_complexity Low_complexity 2 34 0 1103 84 17 11 chr10 7542614 7542793 -138046495 + (GAAA)n Simple_repeat Simple_repeat 1 180 0 1383 202 70 89 chr10 7542850 7543380 -138045908 + MLT2B1 LTR ERVL 1 520 0 506 261 141 0 chr10 7543418 7543602 -138045686 + MIR SINE MIR 53 262 0 197 139 23 0 chr10 7544556 7544599 -138044689 + (CA)n Simple_repeat Simple_repeat 1 44 0 2209 101 10 0 chr10 7545043 7545340 -138043948 + AluSp SINE Alu 1 300 -13 627 195 27 34 chr10 7545920 7546069 -138043219 - MER106B DNA MER1_type -4 1055 908 238 217 0 22 chr10 7546087 7546133 -138043155 - MER106B DNA MER1_type -1014 45 1 531 332 53 4 chr10 7546529 7546755 -138042533 - L2 LINE L2 -265 3048 2812 274 139 21 35 chr10 7547323 7547467 -138041821 + HERV17 LTR ERV1 708 849 -7777 741 163 0 0 chr10 7547469 7547723 -138041565 + GA-rich Low_complexity Low_complexity 1 254 0 333 145 0 0 chr10 7547726 7547802 -138041486 + (GA)n Simple_repeat Simple_repeat 2 77 0 2555 60 0 0 chr10 7548883 7549181 -138040107 - AluY SINE Alu -12 299 2 233 216 0 54 chr10 7549581 7549655 -138039633 + L1M4 LINE L1 4577 4646 -1500 2289 135 16 16 chr10 7549723 7550087 -138039201 + THE1B LTR MaLR 1 364 0 258 32 0 0 chr10 7550288 7550319 -138038969 + (CA)n Simple_repeat Simple_repeat 2 32 0 2187 116 13 10 chr10 7550853 7551164 -138038124 + AluSx SINE Alu 1 312 0 207 69 0 0 chr10 7551564 7551593 -138037695 + (CAGAGA)n Simple_repeat Simple_repeat 2 30 0 1110 171 64 138 chr10 7552312 7552643 -138036645 - MLT1B LTR MaLR 0 390 95 2501 73 0 0 chr10 7552643 7552945 -138036343 - AluSx SINE Alu -6 306 5 1110 171 64 138 chr10 7552945 7553033 -138036255 - MLT1B LTR MaLR -295 95 2 424 267 61 28 chr10 7553213 7553393 -138035895 - MER20B DNA MER1_type -83 700 515 941 127 40 0 chr10 7553439 7553612 -138035676 + L1MB8 LINE L1 5998 6177 -1 982 289 102 11 chr10 7553691 7554131 -138035157 - MER20B DNA MER1_type -268 515 36 3010 198 84 30 chr10 7554893 7555101 -138034187 - L1ME1 LINE L1 -1 6165 5970 2157 114 0 0 chr10 7555101 7555381 -138033907 + AluSx SINE Alu 22 301 -11 3010 198 84 30 chr10 7555381 7556351 -138032937 - L1ME1 LINE L1 -196 5970 4922 180 111 0 0 chr10 7556912 7556939 -138032349 + (ATG)n Simple_repeat Simple_repeat 1 27 0 540 269 44 0 chr10 7557204 7557364 -138031924 - MLT1G LTR MaLR 0 590 424 * 965 275 50 17 chr10 7557362 7557660 -138031628 - MLT1G LTR MaLR -271 319 12 251 157 12 36 chr10 7558322 7558405 -138030883 + CT-rich Low_complexity Low_complexity 1 81 0 200 254 51 0 chr10 7559335 7559394 -138029894 - MIR3 SINE MIR -50 158 97 2044 105 0 40 chr10 7559419 7559723 -138029565 + AluSx SINE Alu 17 308 -4 2319 103 0 0 chr10 7560546 7560847 -138028441 - AluSx SINE Alu -11 301 1 243 250 0 0 chr10 7561005 7561053 -138028235 + L2 LINE L2 3219 3266 -6 1312 144 0 10 chr10 7561073 7561267 -138028021 - AluJo SINE Alu -14 298 107 570 137 11 0 chr10 7561267 7561362 -138027926 - THE1B LTR MaLR -1 363 268 236 342 7 20 chr10 7561363 7561515 -138027773 + CT-rich Low_complexity Low_complexity 3 152 0 839 259 47 0 chr10 7562766 7563002 -138026286 + L1MB3 LINE L1 5934 6180 -3 351 0 0 0 chr10 7563263 7563302 -138025986 + (CA)n Simple_repeat Simple_repeat 2 40 0 825 168 14 7 chr10 7564189 7564332 -138024956 + FRAM SINE Alu 1 144 -32 315 0 0 0 chr10 7564332 7564367 -138024921 + (CAAT)n Simple_repeat Simple_repeat 4 38 0 2322 131 80 10 chr10 7565018 7565416 -138023872 + MSTA LTR MaLR 1 426 -2 2225 154 17 51 chr10 7566004 7566419 -138022869 - Tigger2a DNA MER2_type -33 401 1 2168 110 3 0 chr10 7566638 7566956 -138022332 + AluSq SINE Alu 1 319 0 1654 130 14 11 chr10 7567808 7568084 -138021204 - Tigger2a DNA MER2_type -157 277 1 690 131 0 25 chr10 7568235 7568357 -138020931 + AluJb SINE Alu 185 303 -9 725 254 23 9 chr10 7569358 7569575 -138019713 + L1MC5 LINE L1 7706 7925 -36 2471 53 40 3 chr10 7570077 7570377 -138018911 - AluY SINE Alu 0 311 1 5196 120 8 10 chr10 7570626 7571408 -138017880 - L1PA15 LINE L1 -69 6096 5317 2304 132 25 6 chr10 7571923 7572280 -138017008 + THE1B LTR MaLR 1 364 0 2281 71 40 17 chr10 7572365 7572661 -138016627 + AluYa5 SINE Alu 1 303 -8 2281 116 0 0 chr10 7573036 7573337 -138015951 - AluSg SINE Alu -9 301 1 255 229 125 0 chr10 7573927 7574023 -138015265 - HAL1 LINE L1 -1036 1471 1364 1961 103 0 66 chr10 7574368 7574709 -138014579 + AluSx SINE Alu 1 321 0 249 219 42 135 chr10 7574727 7574919 -138014369 + MLT1J LTR MaLR 1 174 -337 2318 99 0 28 chr10 7577117 7577439 -138011849 - AluSq SINE Alu 0 313 1 439 267 35 47 chr10 7579073 7579245 -138010043 - MIR SINE MIR -40 222 53 27 0 0 0 chr10 7579550 7579577 -138009711 + AT_rich Low_complexity Low_complexity 1 27 0 1411 132 15 0 chr10 7580017 7580214 -138009074 - AluJo SINE Alu -26 286 87 2276 89 4 0 chr10 7580410 7580724 -138008564 + AluY SINE Alu 1 315 0 795 214 199 47 chr10 7581240 7581484 -138007804 - Charlie2 DNA MER1_type -3 2859 2653 2340 98 0 13 chr10 7581484 7581800 -138007488 + AluSx SINE Alu 1 312 0 795 214 199 47 chr10 7581800 7582068 -138007220 - Charlie2 DNA MER1_type -209 2653 2269 312 271 88 39 chr10 7582145 7582326 -138006962 - Charlie2 DNA MER1_type -2651 211 22 1387 203 75 11 chr10 7582362 7582737 -138006551 - Zaphod DNA AcHobo -37 3994 3596 1399 230 167 97 chr10 7582738 7583225 -138006063 - Zaphod DNA AcHobo -3043 988 537 1880 134 0 7 chr10 7583225 7583516 -138005772 + AluSg1 SINE Alu 15 303 0 1399 230 167 97 chr10 7583516 7583949 -138005339 - Zaphod DNA AcHobo -3494 537 2 2048 109 11 18 chr10 7584073 7584398 -138004890 - AluSx SINE Alu 0 323 1 1399 206 23 99 chr10 7584905 7585347 -138003941 + MLT2D LTR ERVL 7 414 0 223 288 41 0 chr10 7587666 7587739 -138001549 + MIR SINE MIR 121 196 -66 1853 166 7 3 chr10 7587866 7588167 -138001121 + AluJb SINE Alu 1 302 -10 36 53 0 0 chr10 7588627 7588684 -138000604 + AT_rich Low_complexity Low_complexity 1 57 0 24 0 0 0 chr10 7588969 7588993 -138000295 + AT_rich Low_complexity Low_complexity 1 24 0 212 259 137 58 chr10 7590679 7590730 -137998558 - MIR3 SINE MIR -14 194 148 2501 77 16 56 chr10 7590730 7591035 -137998253 + THE1B LTR MaLR 1 290 -74 2352 76 3 0 chr10 7591035 7591326 -137997962 - AluSg SINE Alu -18 292 1 2501 77 16 56 chr10 7591326 7591398 -137997890 + THE1B LTR MaLR 290 363 -1 212 259 137 58 chr10 7591398 7591485 -137997803 - MIR3 SINE MIR -60 148 45 1843 186 60 35 chr10 7593234 7593665 -137995623 + L1MB7 LINE L1 5728 6169 -15 907 184 61 10 chr10 7594446 7594642 -137994646 - MER20B DNA MER1_type 0 219 14 268 93 0 0 chr10 7594750 7594793 -137994495 - L1PA2 LINE L1 0 6155 6113 236 217 0 66 chr10 7594962 7595068 -137994220 + CT-rich Low_complexity Low_complexity 1 99 0 948 201 56 42 chr10 7595705 7595993 -137993295 - MER33 DNA MER1_type -14 310 19 650 213 31 0 chr10 7596729 7596856 -137992432 + FLAM_A SINE Alu 3 133 0 1909 141 0 24 chr10 7597549 7597847 -137991441 - AluJb SINE Alu -21 291 1 2192 129 0 10 chr10 7598796 7599107 -137990181 - AluSx SINE Alu -4 308 1 2311 91 30 0 chr10 7599601 7599898 -137989390 - AluSx SINE Alu -6 306 1 1684 169 77 66 chr10 7600685 7601112 -137988176 + MSTB1 LTR MaLR 1 432 0 2015 147 7 0 chr10 7601662 7601968 -137987320 + AluSx SINE Alu 1 308 -4 450 0 0 0 chr10 7603432 7603482 -137985806 + (CA)n Simple_repeat Simple_repeat 1 50 0 2176 86 0 40 chr10 7604119 7604421 -137984867 + AluY SINE Alu 22 311 0 2451 75 3 3 chr10 7604570 7604876 -137984412 + AluSc SINE Alu 1 306 -3 3640 113 0 52 chr10 7604984 7605540 -137983748 - MER1A DNA MER1_type 0 527 1 898 161 58 7 chr10 7605779 7605934 -137983354 - Charlie3 DNA MER1_type -2547 163 1 714 211 0 0 chr10 7606188 7606368 -137982920 + (TA)n Simple_repeat Simple_repeat 1 180 0 2158 142 7 0 chr10 7608003 7608382 -137980906 + AluSx SINE Alu 1 381 0 282 270 110 20 chr10 7608389 7608489 -137980799 + MIR3 SINE MIR 48 156 -52 1385 77 48 62 chr10 7608792 7609000 -137980288 - AluSx SINE Alu -107 205 1 1244 214 0 8 chr10 7611415 7611672 -137977616 + L1PA16 LINE L1 5894 6148 -18 1218 182 0 10 chr10 7611799 7612008 -137977280 + AluJo SINE Alu 1 207 -105 6498 156 21 22 chr10 7612110 7612430 -137976858 - L1MC1 LINE L1 -20 6313 5994 2261 129 31 11 chr10 7612430 7612787 -137976501 + THE1B LTR MaLR 1 364 0 6498 156 21 22 chr10 7612787 7613134 -137976154 - L1MC1 LINE L1 -339 5994 5648 2082 118 227 2 chr10 7613134 7613531 -137975757 - LTR19A LTR ERV1 0 486 1 6498 156 21 22 chr10 7613531 7614279 -137975009 - L1MC1 LINE L1 -685 5648 4896 2049 72 8 8 chr10 7614811 7615073 -137974215 - Charlie3 DNA MER1_type -8 2702 2441 2351 114 0 6 chr10 7615180 7615495 -137973793 + AluSp SINE Alu 1 313 0 2136 96 6 19 chr10 7616972 7617285 -137972003 + AluSc SINE Alu 1 309 0 24 32 0 0 chr10 7617506 7617537 -137971751 + AT_rich Low_complexity Low_complexity 1 31 0 24 0 0 0 chr10 7618776 7618800 -137970488 + AT_rich Low_complexity Low_complexity 1 24 0 198 294 0 29 chr10 7619647 7619715 -137969573 - L2 LINE L2 0 3272 3207 615 277 110 67 chr10 7619767 7620061 -137969227 + MLT1J LTR MaLR 1 322 -189 619 253 170 21 chr10 7620061 7620255 -137969033 + MER58A DNA MER1_type 1 223 -1 615 277 110 67 chr10 7620255 7620407 -137968881 + MLT1J LTR MaLR 322 466 -45 235 261 80 57 chr10 7621108 7621196 -137968092 + MLT1J LTR MaLR 110 199 -312 234 250 0 0 chr10 7621314 7621362 -137967926 + MLT1I LTR MaLR 346 393 -16 26 0 0 0 chr10 7621769 7621795 -137967493 + AT_rich Low_complexity Low_complexity 1 26 0 2110 108 0 56 chr10 7621889 7622213 -137967075 + AluSq SINE Alu 1 306 -7 2017 138 18 33 chr10 7622292 7622789 -137966499 - L1MB7 LINE L1 -175 6009 2806 2365 182 71 11 chr10 7623002 7623468 -137965820 + MLT1D LTR MaLR 12 505 0 550 302 104 0 chr10 7623533 7623755 -137965533 + MIR SINE MIR 12 256 -6 344 220 43 0 chr10 7624296 7624437 -137964851 + (TG)n Simple_repeat Simple_repeat 2 148 0 359 249 86 104 chr10 7624502 7624723 -137964565 + MIR SINE MIR 18 234 -28 1687 198 7 0 chr10 7626359 7626642 -137962646 + AluJb SINE Alu 1 285 -27 563 51 26 0 chr10 7626642 7626720 -137962568 + (CATA)n Simple_repeat Simple_repeat 4 83 0 235 261 80 57 chr10 7626948 7627036 -137962252 + MLT1J LTR MaLR 110 199 -312 234 250 0 0 chr10 7627154 7627202 -137962086 + MLT1I LTR MaLR 346 393 -16 2167 130 0 0 chr10 7627729 7628021 -137961267 + AluSx SINE Alu 1 292 -20 713 166 0 65 chr10 7628816 7628955 -137960333 + FLAM_A SINE Alu 1 130 -3 2491 97 0 0 chr10 7629530 7629840 -137959448 + AluSp SINE Alu 1 310 -3 2442 60 13 3 chr10 7631319 7631618 -137957670 + AluY SINE Alu 1 302 -9 1689 155 30 0 chr10 7631935 7632200 -137957088 + AluSx SINE Alu 1 273 -39 549 280 75 0 chr10 7632403 7632589 -137956699 - MIR SINE MIR -48 214 15 2069 107 7 58 chr10 7633254 7633564 -137955724 + AluSx SINE Alu 5 298 -14 499 262 35 79 chr10 7633689 7633918 -137955370 - L2 LINE L2 -3 3310 3092 405 0 0 0 chr10 7633928 7633973 -137955315 + (ATG)n Simple_repeat Simple_repeat 2 46 0 1024 150 6 12 chr10 7633973 7634140 -137955148 - AluSq SINE Alu -29 284 119 670 131 10 0 chr10 7634313 7634412 -137954876 - AluSq/x SINE Alu -208 104 5 201 245 113 0 chr10 7634432 7634485 -137954803 - L2 LINE L2 -245 3068 3010 251 300 64 18 chr10 7635423 7635533 -137953755 + MIR3 SINE MIR 81 195 -13 583 210 80 7 chr10 7635821 7635959 -137953329 + MER3 DNA MER1_type 38 185 -24 2111 119 0 0 chr10 7636558 7636836 -137952452 + AluSx SINE Alu 1 278 -34 207 69 0 0 chr10 7636838 7636867 -137952421 + (CAAT)n Simple_repeat Simple_repeat 4 32 0 2422 88 0 0 chr10 7636926 7637223 -137952065 + AluSg SINE Alu 1 297 -13 530 286 48 31 chr10 7637570 7637860 -137951428 - L1ME4a LINE L1 -237 5884 5590 2299 95 3 0 chr10 7637975 7638270 -137951018 + AluSx SINE Alu 3 298 -14 470 91 13 0 chr10 7638699 7638776 -137950512 + (TA)n Simple_repeat Simple_repeat 1 78 0 2163 112 7 3 chr10 7638777 7639071 -137950217 - AluSx SINE Alu -17 295 1 355 275 218 26 chr10 7639325 7639518 -137949770 + MLT1J LTR MaLR 1 230 -281 278 255 39 10 chr10 7639616 7639718 -137949570 + MLT1J LTR MaLR 400 504 -7 1416 110 106 9 chr10 7639742 7639969 -137949319 - AluJb SINE Alu -13 299 51 261 287 61 93 chr10 7639988 7640235 -137949053 - HAL1 LINE L1 -2 2505 2267 920 280 140 36 chr10 7640353 7640777 -137948511 - HAL1 LINE L1 -447 2060 1571 1378 147 151 8 chr10 7640777 7641036 -137948252 + AluSg1 SINE Alu 1 296 -13 920 280 140 36 chr10 7641036 7641132 -137948156 - HAL1 LINE L1 -936 1571 1486 836 216 180 41 chr10 7641149 7641566 -137947722 - HAL1 LINE L1 -1091 1416 942 435 283 72 32 chr10 7641582 7641693 -137947595 - HAL1 LINE L1 -1596 911 806 1871 109 6 45 chr10 7641693 7642004 -137947284 + AluSx SINE Alu 1 299 -13 435 283 72 32 chr10 7642004 7642143 -137947145 - HAL1 LINE L1 -1701 806 651 3059 40 0 21 chr10 7642429 7642807 -137946481 + L1PA5 LINE L1 5784 6153 -1 2345 74 3 13 chr10 7644961 7645272 -137944016 - AluSx SINE Alu -4 308 1 2266 102 0 0 chr10 7646591 7646895 -137942393 + AluSx SINE Alu 1 304 -8 1828 142 3 0 chr10 7649101 7649412 -137939876 + AluSx SINE Alu 1 312 0 371 273 163 17 chr10 7649482 7649654 -137939634 + MIR SINE MIR 48 244 -18 874 189 17 0 chr10 7649663 7649843 -137939445 + L1MA4 LINE L1 6111 6293 -7 21 0 0 0 chr10 7649857 7649878 -137939410 + AT_rich Low_complexity Low_complexity 1 21 0 314 283 76 62 chr10 7651447 7651592 -137937696 - MIR3 SINE MIR -49 159 13 202 200 0 0 chr10 7655781 7655816 -137933472 + (CA)n Simple_repeat Simple_repeat 2 36 0 200 206 0 0 chr10 7656463 7656497 -137932791 + T-rich Low_complexity Low_complexity 5 38 0 235 167 14 28 chr10 7656666 7656738 -137932550 + (CTCG)n Simple_repeat Simple_repeat 2 72 0 252 0 0 0 chr10 7656805 7656833 -137932455 + (T)n Simple_repeat Simple_repeat 1 28 0 204 125 0 0 chr10 7656840 7656872 -137932416 + (TG)n Simple_repeat Simple_repeat 1 32 0 528 264 49 0 chr10 7660601 7660745 -137928543 + MIR3 SINE MIR 28 178 -30 2124 111 0 29 chr10 7661294 7661609 -137927679 + AluSx SINE Alu 1 306 -6 1778 157 7 0 chr10 7662269 7662556 -137926732 + AluJo SINE Alu 3 291 -21 23 0 0 0 chr10 7663064 7663087 -137926201 + AT_rich Low_complexity Low_complexity 1 23 0 694 224 82 56 chr10 7663546 7663869 -137925419 - L2 LINE L2 -6 3307 2929 450 280 106 24 chr10 7664084 7664161 -137925127 - L3 LINE CR1 -11 1566 1497 2119 113 30 88 chr10 7664161 7664559 -137924729 - THE1C LTR MaLR 0 375 1 450 280 106 24 chr10 7664559 7664688 -137924600 - L3 LINE CR1 -80 1497 1343 890 292 4 25 chr10 7665149 7665392 -137923896 - MIR SINE MIR -1 261 24 509 284 47 30 chr10 7665677 7665846 -137923442 - MIR SINE MIR -28 234 63 2950 107 34 2 chr10 7665863 7666275 -137923013 + Charlie3 DNA MER1_type 87 511 -2199 * 3473 84 24 0 chr10 7666260 7666714 -137922574 + Charlie3 DNA MER1_type 2242 2706 -4 243 255 4 31 chr10 7666914 7666987 -137922301 + MIR3 SINE MIR 15 85 -132 265 279 0 0 chr10 7666992 7667053 -137922235 + CT-rich Low_complexity Low_complexity 4 64 0 875 165 6 19 chr10 7667666 7667824 -137921464 + FRAM SINE Alu 1 155 -21 311 270 114 28 chr10 7667863 7668005 -137921283 + MIR3 SINE MIR 5 161 -101 2120 123 0 0 chr10 7668005 7668306 -137920982 + AluSg SINE Alu 1 301 -9 311 270 114 28 chr10 7668306 7668374 -137920914 + MIR3 SINE MIR 161 222 -40 206 157 0 39 chr10 7668832 7668883 -137920405 + GA-rich Low_complexity Low_complexity 3 51 0 963 300 101 31 chr10 7669981 7670728 -137918560 + L2 LINE L2 2513 3311 -2 25 0 0 0 chr10 7672751 7672776 -137916512 + AT_rich Low_complexity Low_complexity 1 25 0 22 35 0 0 chr10 7673142 7673171 -137916117 + AT_rich Low_complexity Low_complexity 1 29 0 673 171 0 0 chr10 7673202 7673307 -137915981 - FLAM_A SINE Alu -15 127 23 1976 92 20 33 chr10 7673322 7673628 -137915660 - AluSx SINE Alu -9 303 2 2145 128 0 0 chr10 7673654 7673966 -137915322 - AluSx SINE Alu 0 312 1 641 318 55 25 chr10 7674212 7674341 -137914947 - MIR SINE MIR -22 240 101 415 95 24 83 chr10 7674341 7674425 -137914863 + MADE1 DNA Mariner 1 79 -1 641 318 55 25 chr10 7674425 7674496 -137914792 - MIR SINE MIR -161 101 34 574 244 144 12 chr10 7675136 7675296 -137913992 + MER5A DNA MER1_type 9 189 0 194 328 8 74 chr10 7675296 7675376 -137913912 - MIR3 SINE MIR -48 160 89 2138 106 0 0 chr10 7675376 7675677 -137913611 - AluSx SINE Alu -7 305 5 194 328 8 74 chr10 7675677 7675718 -137913570 - MIR3 SINE MIR -119 89 47 2542 39 0 3 chr10 7676347 7676659 -137912629 + AluY SINE Alu 1 311 0 1762 149 7 19 chr10 7677691 7678000 -137911288 - AluJb SINE Alu -7 305 1 197 264 226 9 chr10 7678346 7678452 -137910836 - MIR SINE MIR -50 212 84 2033 95 65 3 chr10 7679834 7680128 -137909160 - AluSx SINE Alu 0 312 1 410 291 45 8 chr10 7680266 7680400 -137908888 - MIR SINE MIR -56 206 68 1940 160 0 0 chr10 7680879 7681185 -137908103 - AluSx SINE Alu -6 306 1 255 61 0 0 chr10 7681559 7681592 -137907696 + (TTTC)n Simple_repeat Simple_repeat 1 33 0 2151 111 0 0 chr10 7681894 7682191 -137907097 + AluSg SINE Alu 1 297 -13 274 238 83 0 chr10 7683190 7683274 -137906014 + MIR SINE MIR 122 212 -50 549 345 24 5 chr10 7683312 7683521 -137905767 - MIR SINE MIR -1 261 49 21 0 0 0 chr10 7683748 7683769 -137905519 + AT_rich Low_complexity Low_complexity 1 21 0 973 139 0 6 chr10 7683769 7683927 -137905361 - AluSg/x SINE Alu -23 286 130 270 0 0 0 chr10 7684801 7684831 -137904457 + (TG)n Simple_repeat Simple_repeat 2 31 0 1643 158 44 10 chr10 7685097 7685395 -137903893 - AluJb SINE Alu -4 308 1 325 250 3 0 chr10 7685425 7685506 -137903782 + AluJ/FLAM SINE Alu 1 64 -238 1503 142 64 28 chr10 7685960 7686242 -137903046 + AluJo SINE Alu 1 292 -20 418 297 97 26 chr10 7686359 7686514 -137902774 - MIR SINE MIR -77 185 20 2201 100 0 0 chr10 7686617 7686927 -137902361 + AluSx SINE Alu 3 312 0 356 211 117 16 chr10 7688704 7688832 -137900456 + Charlie1 DNA MER1_type 2621 2761 0 1447 165 0 92 chr10 7689339 7689517 -137899771 - AluJo SINE Alu -10 302 166 2078 117 7 0 chr10 7689517 7689817 -137899471 - AluSp SINE Alu -11 302 1 1447 165 0 92 chr10 7689817 7689965 -137899323 - AluJo SINE Alu -146 166 6 26 0 0 0 chr10 7689996 7690022 -137899266 + AT_rich Low_complexity Low_complexity 1 26 0 237 196 0 98 chr10 7690034 7690146 -137899142 - Charlie7 DNA MER1_type -61 2551 2451 1748 167 7 24 chr10 7691922 7692215 -137897073 - AluJb SINE Alu -21 291 4 797 298 82 70 chr10 7692376 7692960 -137896328 - L1MC4a LINE L1 -1907 5901 5311 1800 143 68 0 chr10 7693083 7693376 -137895912 - AluSx SINE Alu 0 311 1 215 79 26 0 chr10 7693385 7693423 -137895865 + (TA)n Simple_repeat Simple_repeat 2 40 0 285 266 87 49 chr10 7693598 7693782 -137895506 + L1MCc LINE L1 14 204 -6219 890 139 0 8 chr10 7694197 7694326 -137894962 - AluJb SINE Alu -21 291 164 618 251 22 27 chr10 7694550 7695125 -137894163 + L1MCc LINE L1 1263 2146 -4795 1435 224 11 0 chr10 7695127 7695391 -137893897 + Tigger7 DNA MER2_type 1 267 -466 688 136 0 19 chr10 7695392 7695495 -137893793 + Tigger7 DNA MER2_type 2387 2487 0 2152 140 7 0 chr10 7696446 7696753 -137892535 - AluSx SINE Alu -3 309 1 577 259 57 57 chr10 7697026 7697219 -137892069 - MLT1L LTR MaLR -399 216 24 2185 86 7 30 chr10 7697564 7697866 -137891422 + AluSp SINE Alu 19 313 0 1854 141 48 7 chr10 7698407 7698698 -137890590 - AluSx SINE Alu -9 303 1 189 382 24 18 chr10 7698880 7699045 -137890243 + L2 LINE L2 2919 3084 -188 276 338 0 0 chr10 7699057 7699137 -137890151 + MIR SINE MIR 12 91 -171 1012 246 45 34 chr10 7699137 7699450 -137889838 - LTR40b LTR ERVL 0 462 154 3895 122 27 42 chr10 7699450 7700115 -137889173 + L1PA13 LINE L1 5509 6163 0 2027 188 5 5 chr10 7700115 7700499 -137888789 + L1PB4 LINE L1 5769 6152 -4 1012 246 45 34 chr10 7700499 7700612 -137888676 - LTR40b LTR ERVL -307 155 73 396 278 0 0 chr10 7700675 7700783 -137888505 + MIR SINE MIR 89 196 -66 649 135 8 71 chr10 7700894 7701020 -137888268 - FLAM_C SINE Alu -15 118 1 388 287 70 0 chr10 7701343 7701472 -137887816 + MIR SINE MIR 94 231 -31 24 32 0 0 chr10 7702557 7702588 -137886700 + AT_rich Low_complexity Low_complexity 1 31 0 2304 97 7 0 chr10 7702815 7703123 -137886165 - AluY SINE Alu -1 310 1 281 188 0 88 chr10 7703527 7703582 -137885706 + MLT1J1 LTR MaLR 352 399 -47 2079 129 3 0 chr10 7703582 7703876 -137885412 - AluSx SINE Alu -17 295 1 281 188 0 88 chr10 7703876 7703900 -137885388 + MLT1J1 LTR MaLR 399 424 -22 797 284 120 12 chr10 7704154 7704495 -137884793 + LTR16C LTR ERVL 107 484 -7 301 309 55 0 chr10 7705150 7705260 -137884028 + L2 LINE L2 3198 3313 0 529 70 14 0 chr10 7706016 7706087 -137883201 - L1PA5 LINE L1 -239 5916 5845 1913 42 8 4 chr10 7706087 7706306 -137882982 + L1PA5 LINE L1 5917 6149 -5 256 24 49 0 chr10 7706306 7706347 -137882941 + (TA)n Simple_repeat Simple_repeat 1 43 0 1560 183 39 7 chr10 7706919 7707196 -137882092 + AluJo SINE Alu 1 289 -23 774 84 0 0 chr10 7707196 7707303 -137881985 + (GGGA)n Simple_repeat Simple_repeat 4 110 0 2255 108 0 3 chr10 7707692 7707989 -137881299 + AluSc SINE Alu 1 296 -13 2349 82 3 0 chr10 7708107 7708400 -137880888 - AluSq SINE Alu -19 294 1 234 366 37 8 chr10 7708735 7708869 -137880419 - L2 LINE L2 -9 3263 3126 1432 107 65 0 chr10 7708945 7709161 -137880127 + MER30 DNA MER1_type 1 230 0 238 257 81 14 chr10 7709341 7709415 -137879873 + MIR3 SINE MIR 89 167 -41 440 134 24 0 chr10 7709463 7709545 -137879743 + CT-rich Low_complexity Low_complexity 4 87 0 1220 124 295 8 chr10 7709568 7709802 -137879486 - AluSq SINE Alu -1 302 2 1678 146 13 73 chr10 7709842 7710157 -137879131 - AluJb SINE Alu -16 296 1 183 42 0 0 chr10 7710378 7710402 -137878886 + (CAAAAA)n Simple_repeat Simple_repeat 2 25 0 244 354 0 0 chr10 7710770 7710883 -137878405 + GA-rich Low_complexity Low_complexity 5 117 0 3648 74 2 4 chr10 7710947 7711418 -137877870 + L1PA10 LINE L1 5691 6160 -8 186 43 0 0 chr10 7712634 7712657 -137876631 + (T)n Simple_repeat Simple_repeat 1 23 0 238 309 12 0 chr10 7712741 7712822 -137876466 - MLT1J LTR MaLR -310 201 120 512 197 33 40 chr10 7712937 7713089 -137876199 + MLT1D LTR MaLR 4 154 -351 772 204 38 6 chr10 7713158 7713347 -137875941 + MLT1D LTR MaLR 311 545 -4 244 308 0 0 chr10 7713347 7713425 -137875863 - L1ME LINE L1 -279 5891 5814 420 290 150 34 chr10 7713458 7713810 -137875478 - L1ME LINE L1 -463 5699 5378 2069 126 11 3 chr10 7714308 7714594 -137874694 + AluSx SINE Alu 5 292 -20 2095 328 38 23 chr10 7714843 7715971 -137873317 + HERV16 LTR ERVL 2262 3080 -1916 3122 232 24 51 chr10 7716054 7717470 -137871818 + L1M4 LINE L1 3813 5093 -1053 547 306 104 0 chr10 7718154 7718376 -137870912 - MIR SINE MIR -6 256 12 2388 178 71 11 chr10 7718440 7718906 -137870382 - MLT1D LTR MaLR 0 505 12 2057 133 18 33 chr10 7719119 7719616 -137869672 + L1MB7 LINE L1 2806 6009 -175 2183 92 0 62 chr10 7719695 7720020 -137869268 - AluSq SINE Alu -8 305 1 1823 112 0 0 chr10 7720442 7720691 -137868597 - AluSx SINE Alu 0 312 64 22 0 0 0 chr10 7722305 7722327 -137866961 + AT_rich Low_complexity Low_complexity 1 22 0 407 130 413 0 chr10 7722327 7722419 -137866869 + AluJo SINE Alu 7 136 -176 39 0 0 0 chr10 7722419 7722458 -137866830 + AT_rich Low_complexity Low_complexity 1 39 0 2266 110 0 3 chr10 7722587 7722887 -137866401 + AluSx SINE Alu 1 299 -13 2176 152 17 6 chr10 7723267 7723628 -137865660 + MLT1A1 LTR MaLR 1 365 0 320 296 76 63 chr10 7724015 7724552 -137864736 - L1ME LINE L1 -292 5829 5270 213 119 0 0 chr10 7724552 7724594 -137864694 + (TC)n Simple_repeat Simple_repeat 2 43 0 686 214 0 0 chr10 7724617 7724734 -137864554 - FLAM_A SINE Alu -13 129 13 2068 131 0 31 chr10 7725245 7725566 -137863722 + AluSx SINE Alu 1 311 -1 475 189 57 0 chr10 7726091 7726197 -137863091 - MIR SINE MIR -98 164 53 264 30 0 0 chr10 7727155 7727188 -137862100 + (TTTG)n Simple_repeat Simple_repeat 2 34 0 222 241 0 19 chr10 7727564 7727618 -137861670 + GA-rich Low_complexity Low_complexity 4 56 0 2293 104 3 3 chr10 7727840 7728139 -137861149 + AluSq SINE Alu 1 299 -14 817 144 0 0 chr10 7728157 7728275 -137861013 + FLAM_C SINE Alu 4 121 -22 792 181 181 16 chr10 7728540 7728728 -137860560 + MER20 DNA MER1_type 1 219 0 205 75 75 0 chr10 7729993 7730033 -137859255 + A-rich Low_complexity Low_complexity 4 46 0 25 0 0 0 chr10 7730119 7730144 -137859144 + AT_rich Low_complexity Low_complexity 1 25 0 466 261 76 53 chr10 7731894 7732186 -137857102 + L1ME1 LINE L1 5761 6045 -117 1579 139 58 0 chr10 7732186 7732445 -137856843 - L1PB4 LINE L1 -3 6153 5880 679 159 0 0 chr10 7732445 7732552 -137856736 - U6 snRNA snRNA 0 107 1 466 261 76 53 chr10 7732552 7732651 -137856637 + L1ME1 LINE L1 6044 6162 0 24 0 0 0 chr10 7732881 7732905 -137856383 + AT_rich Low_complexity Low_complexity 1 24 0 1046 215 89 15 chr10 7732937 7733101 -137856187 - HAL1 LINE L1 -116 2391 2241 426 20 0 0 chr10 7733101 7733152 -137856136 + (CA)n Simple_repeat Simple_repeat 1 51 0 1046 215 89 15 chr10 7733152 7733312 -137855976 - HAL1 LINE L1 -266 2241 2043 257 291 27 9 chr10 7733344 7733454 -137855834 - HAL1 LINE L1 -652 1855 1744 180 176 0 0 chr10 7733967 7734001 -137855287 + (CATATA)n Simple_repeat Simple_repeat 2 35 0 290 323 155 0 chr10 7734030 7734185 -137855103 - MIR SINE MIR -82 180 2 304 217 0 0 chr10 7735192 7735252 -137854036 - MIR3 SINE MIR -16 192 133 2150 121 7 0 chr10 7736300 7736589 -137852699 + AluSx SINE Alu 3 293 -19 2007 178 84 63 chr10 7737157 7737646 -137851642 + MLT2B1 LTR ERVL 2 500 -20 189 107 0 0 chr10 7737777 7737805 -137851483 + (A)n Simple_repeat Simple_repeat 1 28 0 1016 273 104 71 chr10 7737808 7738299 -137850989 + MLT1J LTR MaLR 1 507 -4 221 336 71 0 chr10 7738969 7739082 -137850206 + L2 LINE L2 3150 3270 -2 377 293 0 10 chr10 7739988 7740087 -137849201 + L2 LINE L2 3175 3272 0 205 361 0 0 chr10 7740621 7740743 -137848545 + T-rich Low_complexity Low_complexity 1 122 0 819 158 92 30 chr10 7741400 7741564 -137847724 - MER1B DNA MER1_type -85 212 39 1750 156 7 24 chr10 7741608 7741903 -137847385 - AluJb SINE Alu -22 290 1 200 299 45 45 chr10 7742543 7742610 -137846678 - L2 LINE L2 -5 3308 3242 189 0 0 0 chr10 7742754 7742775 -137846513 + (TTCA)n Simple_repeat Simple_repeat 1 21 0 353 355 24 8 chr10 7742775 7742899 -137846389 - L2 LINE L2 -13 3259 3134 366 245 136 32 chr10 7743955 7744110 -137845178 - L1ME4a LINE L1 -57 6064 5894 1422 103 0 19 chr10 7744176 7744389 -137844899 - L1MA2 LINE L1 0 6304 6096 252 59 0 0 chr10 7745281 7745315 -137843973 + (TG)n Simple_repeat Simple_repeat 1 34 0 216 0 0 0 chr10 7745315 7745339 -137843949 + (GA)n Simple_repeat Simple_repeat 1 24 0 1624 236 6 17 chr10 7745339 7745699 -137843589 - MLT2D LTR ERVL -57 357 2 1319 175 0 0 chr10 7746481 7746704 -137842584 - AluJb SINE Alu -18 294 72 1583 171 0 0 chr10 7746713 7746971 -137842317 - AluJb SINE Alu -52 260 3 2003 108 0 34 chr10 7747463 7747786 -137841502 + AluSx SINE Alu 1 312 0 201 147 0 0 chr10 7748187 7748221 -137841067 + (TGAA)n Simple_repeat Simple_repeat 2 35 0 194 274 179 12 chr10 7748434 7748518 -137840770 - MER5B DNA MER1_type -29 149 52 416 301 127 17 chr10 7748913 7749149 -137840139 - MIR SINE MIR 0 262 1 24 67 0 0 chr10 7749700 7749745 -137839543 + AT_rich Low_complexity Low_complexity 1 45 0 1835 121 32 41 chr10 7749872 7750062 -137839226 - AluSx SINE Alu 0 312 125 387 0 0 0 chr10 7750062 7750105 -137839183 + (TG)n Simple_repeat Simple_repeat 2 44 0 1835 121 32 41 chr10 7750105 7750229 -137839059 - AluSx SINE Alu -187 125 1 2033 134 0 0 chr10 7750378 7750683 -137838605 - AluSx SINE Alu -6 306 2 1990 98 33 0 chr10 7751302 7751614 -137837674 - AluSq SINE Alu 0 321 1 200 288 0 17 chr10 7752510 7752569 -137836719 + GA-rich Low_complexity Low_complexity 3 60 0 192 77 0 0 chr10 7752570 7752596 -137836692 + (GGGA)n Simple_repeat Simple_repeat 3 28 0 807 181 7 13 chr10 7752609 7752764 -137836524 + FRAM SINE Alu 6 159 -17 2217 113 0 0 chr10 7752885 7753195 -137836093 - AluSx SINE Alu -2 310 1 1916 193 33 0 chr10 7753268 7753605 -137835683 - MER7A DNA MER2_type 0 346 1 2397 52 0 3 chr10 7753745 7754050 -137835238 + AluY SINE Alu 1 304 -7 2019 117 0 7 chr10 7754059 7754367 -137834921 + AluSc SINE Alu 1 306 -3 1874 256 59 24 chr10 7755811 7756386 -137832902 - MLT1G1 LTR MaLR 0 595 1 2074 98 0 3 chr10 7757686 7757971 -137831317 + AluSx SINE Alu 21 304 -8 2347 124 8 8 chr10 7761208 7761563 -137827725 - THE1A LTR MaLR 0 355 1 554 219 231 0 chr10 7761866 7762035 -137827253 + MIR SINE MIR 5 212 -50 442 103 19 159 chr10 7762244 7762318 -137826970 + MLT1C LTR MaLR 3 59 -408 1970 143 0 6 chr10 7762318 7762632 -137826656 - AluSx SINE Alu 0 312 1 442 103 19 159 chr10 7762632 7762664 -137826624 + MLT1C LTR MaLR 59 94 -373 1185 129 0 6 chr10 7762664 7762842 -137826446 + AluSg/x SINE Alu 120 296 -16 1431 195 96 9 chr10 7762842 7763176 -137826112 + MLT1C LTR MaLR 102 464 -3 381 313 63 24 chr10 7764412 7764831 -137824457 + MER113 DNA MER1_type? 2 471 -50 1518 107 4 36 chr10 7766666 7766896 -137822392 - L1P LINE L1 -1275 4871 4648 1255 65 24 0 chr10 7766896 7767062 -137822226 + L1PA8 LINE L1 5997 6168 -4 1518 107 4 36 chr10 7767062 7767084 -137822204 - L1P LINE L1 -1498 4648 4627 4179 135 34 1 chr10 7767815 7768469 -137820819 - L1PA15 LINE L1 -2 6163 5489 255 139 0 0 chr10 7768692 7768728 -137820560 - MER58 DNA MER1_type -2 2418 2383 1963 108 21 0 chr10 7769452 7769738 -137819550 + AluSx SINE Alu 7 298 -14 737 314 104 45 chr10 7769971 7770653 -137818635 + L1MEd LINE L1 26 747 -5372 1668 52 5 5 chr10 7770685 7770897 -137818391 + AluY SINE Alu 1 212 -99 2195 122 0 3 chr10 7771397 7771708 -137817580 - AluSx SINE Alu -2 310 1 973 213 22 0 chr10 7771801 7771984 -137817304 + MER7A DNA MER2_type 1 185 -161 243 302 32 0 chr10 7772373 7772436 -137816852 + MIR SINE MIR 70 134 -74 188 214 36 18 chr10 7772448 7772504 -137816784 + L2 LINE L2 3220 3276 -37 277 279 0 10 chr10 7773894 7773998 -137815290 + G-rich Low_complexity Low_complexity 5 107 0 292 205 121 12 chr10 7774444 7774527 -137814761 + MER3 DNA MER1_type 118 209 0 530 329 26 9 chr10 7774536 7774764 -137814524 - L1ME LINE L1 -345 5776 5545 21 36 0 0 chr10 7774838 7774866 -137814422 + AT_rich Low_complexity Low_complexity 1 28 0 432 280 72 28 chr10 7775025 7775221 -137814067 + L1M4 LINE L1 5221 5420 -748 266 280 224 32 chr10 7775511 7775636 -137813652 - MIR SINE MIR -74 188 40 279 79 0 0 chr10 7776693 7776731 -137812557 + (A)n Simple_repeat Simple_repeat 1 38 0 529 333 45 10 chr10 7777525 7777723 -137811565 - MIR SINE MIR -17 245 41 1915 133 0 10 chr10 7778197 7778499 -137810789 + AluJo SINE Alu 1 299 -13 272 203 34 0 chr10 7778888 7778947 -137810341 - MER58 DNA MER1_type -5 2415 2355 2147 100 3 3 chr10 7778947 7779248 -137810040 - AluSq SINE Alu -12 301 1 854 155 8 0 chr10 7779286 7779415 -137809873 - FLAM_C SINE Alu -3 130 1 24 67 0 0 chr10 7780311 7780356 -137808932 + AT_rich Low_complexity Low_complexity 1 45 0 1794 114 4 14 chr10 7780483 7780763 -137808525 - AluSx SINE Alu 0 312 36 206 296 151 45 chr10 7780763 7780942 -137808346 + L2 LINE L2 2068 2265 -1049 648 70 0 0 chr10 7781140 7781226 -137808062 + (TA)n Simple_repeat Simple_repeat 2 87 0 240 240 0 0 chr10 7782039 7782089 -137807199 - L2 LINE L2 0 3313 3264 2217 88 0 7 chr10 7782339 7782647 -137806641 + AluSc SINE Alu 1 306 -3 212 130 0 43 chr10 7784249 7784282 -137805006 + (TC)n Simple_repeat Simple_repeat 2 34 -11 1516 181 0 27 chr10 7784282 7784575 -137804713 - AluJb SINE Alu -27 285 1 212 130 0 43 chr10 7784575 7784587 -137804701 + (TC)n Simple_repeat Simple_repeat 34 45 0 1873 163 9 34 chr10 7785845 7786157 -137803131 + L1MB5 LINE L1 5829 6133 -41 2262 90 0 10 chr10 7786157 7786469 -137802819 + AluSg SINE Alu 1 309 -1 1873 163 9 34 chr10 7786469 7786505 -137802783 + L1MB5 LINE L1 6133 6168 -6 180 0 0 0 chr10 7786946 7786966 -137802322 + (T)n Simple_repeat Simple_repeat 1 20 0 1429 45 6 0 chr10 7786980 7787159 -137802129 - L1PA8 LINE L1 0 6172 5993 222 338 0 15 chr10 7787233 7787301 -137801987 + L2 LINE L2 3201 3267 -5 830 186 132 0 chr10 7787499 7787666 -137801622 - MER53 DNA DNA 0 189 1 1785 187 15 75 chr10 7788442 7788503 -137800785 - L1MB2 LINE L1 -7 6164 6101 2009 142 3 0 chr10 7788503 7788812 -137800476 - AluSx SINE Alu -2 310 1 1785 187 15 75 chr10 7788812 7789161 -137800127 - L1MB2 LINE L1 -70 6101 5779 281 206 0 22 chr10 7789385 7789477 -137799811 - L1MC4 LINE L1 -1339 6703 6614 1596 114 121 11 chr10 7789496 7789760 -137799528 - AluSg1 SINE Alu -16 293 1 2181 94 3 0 chr10 7789772 7790070 -137799218 - AluSp SINE Alu -14 299 1 2432 63 0 0 chr10 7790471 7790774 -137798514 - AluY SINE Alu -8 303 1 394 345 54 7 chr10 7791828 7791976 -137797312 - MIR SINE MIR -6 256 102 909 186 12 0 chr10 7793205 7793366 -137795922 - MER5A DNA MER1_type -25 164 2 294 284 94 0 chr10 7793430 7793557 -137795731 - L3 LINE CR1 -155 1422 1284 858 307 39 17 chr10 7793694 7794049 -137795239 - L1ME3 LINE L1 -5 6157 5795 2011 79 25 11 chr10 7794121 7794401 -137794887 - AluSq SINE Alu -29 284 1 1750 149 66 30 chr10 7794435 7794797 -137794491 + THE1C LTR MaLR 1 375 0 558 308 122 9 chr10 7794816 7795030 -137794258 - MIR SINE MIR -19 243 6 260 330 157 30 chr10 7795397 7795627 -137793661 - L3b LINE CR1 -76 1507 1249 1531 171 60 17 chr10 7796027 7796326 -137792962 + AluJo SINE Alu 1 312 0 858 209 78 57 chr10 7796375 7796796 -137792492 + L1MC5 LINE L1 7478 7907 -54 2036 115 3 0 chr10 7797454 7797750 -137791538 - AluSx SINE Alu -15 297 1 2150 101 3 13 chr10 7799023 7799330 -137789958 - AluSq SINE Alu -9 304 1 1534 108 31 9 chr10 7799703 7799926 -137789362 + MER30 DNA MER1_type 3 230 0 243 267 76 10 chr10 7800086 7800237 -137789051 - L1M2 LINE L1 -4304 1912 1586 360 309 18 0 chr10 7800266 7800376 -137788912 - L1MEd LINE L1 -5447 672 561 573 225 38 127 chr10 7800715 7800982 -137788306 - MIR SINE MIR 0 262 20 2131 110 3 0 chr10 7801303 7801603 -137787685 + AluSx SINE Alu 1 301 -11 239 308 105 119 chr10 7801763 7802133 -137787155 - L2 LINE L2 0 3272 2908 186 71 0 0 chr10 7802579 7802607 -137786681 + (T)n Simple_repeat Simple_repeat 1 28 0 245 339 51 8 chr10 7803618 7803736 -137785552 + L2 LINE L2 3187 3309 -4 2349 78 7 3 chr10 7803828 7804137 -137785151 + AluSx SINE Alu 1 310 -2 670 222 250 28 chr10 7804276 7804488 -137784800 + MIR SINE MIR 4 262 0 1946 141 0 3 chr10 7804799 7805104 -137784184 + AluSx SINE Alu 1 304 -8 3400 112 23 6 chr10 7805293 7805813 -137783475 - L1MA3 LINE L1 0 6305 5777 379 209 100 0 chr10 7805861 7805971 -137783317 + L1MB7 LINE L1 6064 6184 0 2067 102 7 7 chr10 7806259 7806562 -137782726 + AluSg SINE Alu 1 303 -7 1060 90 0 0 chr10 7806571 7806704 -137782584 + FLAM_C SINE Alu 1 133 0 642 200 74 0 chr10 7806764 7806899 -137782389 - L1ME3A LINE L1 -15 6155 6011 186 43 0 0 chr10 7807131 7807154 -137782134 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 1301 332 0 63 chr10 7807156 7807475 -137781813 - AluSx SINE Alu -13 299 1 2165 106 3 0 chr10 7808034 7808327 -137780961 + AluSx SINE Alu 1 294 -18 330 292 96 78 chr10 7808845 7808911 -137780377 + MIR SINE MIR 25 88 -174 2217 100 3 0 chr10 7808911 7809210 -137780078 - AluSp SINE Alu -13 300 1 330 292 96 78 chr10 7809210 7809362 -137779926 + MIR SINE MIR 88 247 -15 330 301 45 85 chr10 7809751 7809997 -137779291 + L3 LINE CR1 517 752 -825 269 292 135 0 chr10 7810348 7810444 -137778844 - MIR SINE MIR -4 258 150 816 277 113 12 chr10 7810486 7810822 -137778466 - MLT1J LTR MaLR -55 456 87 453 275 19 16 chr10 7810852 7811020 -137778268 - MIR SINE MIR -13 195 30 1118 337 94 18 chr10 7811029 7811643 -137777645 + L3 LINE CR1 912 1572 -5 1637 161 17 14 chr10 7812404 7812696 -137776592 + AluJo SINE Alu 1 293 -19 399 258 25 50 chr10 7813399 7813519 -137775769 + MIR SINE MIR 73 189 -73 2400 73 0 6 chr10 7813903 7814216 -137775072 - AluY SINE Alu 0 311 1 27 0 0 0 chr10 7814274 7814301 -137774987 + AT_rich Low_complexity Low_complexity 1 27 0 817 140 26 72 chr10 7814698 7814884 -137774404 - L1MB2 LINE L1 -12 6177 5987 1839 147 6 28 chr10 7815024 7815343 -137773945 - AluJo SINE Alu 0 312 1 2218 114 0 0 chr10 7815650 7815956 -137773332 + AluSq SINE Alu 1 306 -7 1621 176 25 67 chr10 7816795 7817011 -137772277 - MER2 DNA MER2_type 0 344 147 2226 113 0 0 chr10 7817011 7817321 -137771967 + AluSx SINE Alu 1 310 -2 1621 176 25 67 chr10 7817321 7817463 -137771825 - MER2 DNA MER2_type -197 147 1 2079 113 7 0 chr10 7817807 7818109 -137771179 + AluJo SINE Alu 1 304 -8 317 322 109 12 chr10 7818697 7818907 -137770381 + MIR SINE MIR 21 251 -11 329 303 96 34 chr10 7819175 7819353 -137769935 + MIR SINE MIR 3 191 -71 2307 92 0 6 chr10 7819409 7819723 -137769565 + AluSq SINE Alu 1 312 -1 292 256 47 23 chr10 7820752 7820838 -137768450 - MIR SINE MIR -59 203 116 873 151 0 0 chr10 7820841 7820980 -137768308 - AluSg/x SINE Alu -17 295 157 2086 71 0 4 chr10 7821105 7821409 -137767879 + L1PA5 LINE L1 5871 6173 0 1523 157 33 16 chr10 7821795 7822283 -137767005 - AluJo SINE Alu 0 312 1 195 129 0 0 chr10 7822837 7822868 -137766420 + (TATG)n Simple_repeat Simple_repeat 2 32 0 322 176 0 137 chr10 7822868 7822970 -137766318 - L1MC4 LINE L1 -1339 6703 6616 210 136 34 17 chr10 7823013 7823072 -137766216 + (TATATG)n Simple_repeat Simple_repeat 6 65 0 318 192 10 144 chr10 7823076 7823180 -137766108 - L1MC4 LINE L1 -1339 6703 6614 * 325 217 33 65 chr10 7823093 7823185 -137766103 + L1MC4 LINE L1 6614 6702 -1340 310 264 23 11 chr10 7823199 7823286 -137766002 - L1MC4 LINE L1 -1340 6702 6615 224 163 0 23 chr10 7823291 7823334 -137765954 + (TATATG)n Simple_repeat Simple_repeat 1 42 0 317 297 11 22 chr10 7823334 7823425 -137765863 - L1MC4 LINE L1 -1339 6703 6614 521 189 11 28 chr10 7823431 7823611 -137765677 + (TATG)n Simple_repeat Simple_repeat 2 178 0 327 274 48 0 chr10 7823645 7823729 -137765559 + L1MC4 LINE L1 6615 6702 -1340 182 125 0 50 chr10 7823734 7823774 -137765514 + (TATATG)n Simple_repeat Simple_repeat 5 42 0 331 247 0 72 chr10 7823784 7823881 -137765407 - L1MC4 LINE L1 -1339 6703 6614 21 0 0 0 chr10 7827166 7827187 -137762101 + AT_rich Low_complexity Low_complexity 1 21 0 253 212 59 59 chr10 7827360 7827445 -137761843 - MIR SINE MIR -72 136 52 1721 190 5 42 chr10 7827985 7828143 -137761145 + MLT1A1 LTR MaLR 1 163 -202 1955 112 0 4 chr10 7828143 7828420 -137760868 + AluSc SINE Alu 1 276 -33 195 69 0 0 chr10 7828420 7828449 -137760839 + (CAAAA)n Simple_repeat Simple_repeat 1 29 0 1721 190 5 42 chr10 7828449 7828668 -137760620 + MLT1A1 LTR MaLR 161 365 0 24 32 0 0 chr10 7828832 7828863 -137760425 + AT_rich Low_complexity Low_complexity 1 31 0 1747 160 0 17 chr10 7829603 7829896 -137759392 + AluJb SINE Alu 6 293 -19 1243 174 5 0 chr10 7830112 7830336 -137758952 + AluJo SINE Alu 85 309 -3 26 0 0 0 chr10 7833170 7833196 -137756092 + AT_rich Low_complexity Low_complexity 1 26 0 23 54 0 0 chr10 7833500 7833537 -137755751 + AT_rich Low_complexity Low_complexity 1 37 0 1892 121 10 20 chr10 7834675 7834980 -137754308 - AluSx SINE Alu -10 302 1 243 61 0 0 chr10 7835701 7835734 -137753554 + (TTTA)n Simple_repeat Simple_repeat 1 33 0 2006 97 0 7 chr10 7835734 7836013 -137753275 - AluSc SINE Alu -32 277 1 941 125 0 20 chr10 7836494 7836646 -137752642 - FRAM SINE Alu -6 170 22 237 294 11 76 chr10 7837176 7837268 -137752020 - L3b LINE CR1 -100 1483 1398 375 282 215 34 chr10 7837882 7838407 -137750881 - L1M2 LINE L1 -5779 1070 451 226 124 56 34 chr10 7839445 7839534 -137749754 + (TCTCTG)n Simple_repeat Simple_repeat 4 94 0 432 271 56 124 chr10 7839679 7839782 -137749506 - L2 LINE L2 -2 3270 3162 2027 124 0 0 chr10 7839782 7840103 -137749185 + AluSc SINE Alu 3 309 0 432 271 56 124 chr10 7840103 7840442 -137748846 - L2 LINE L2 -110 3162 2858 2059 113 0 0 chr10 7840754 7841046 -137748242 + AluSc SINE Alu 1 292 -17 231 313 35 9 chr10 7841168 7841283 -137748005 + L1ME LINE L1 5614 5731 -390 1059 200 19 0 chr10 7842019 7842229 -137747059 - L1MB5 LINE L1 -323 5851 5638 278 197 28 0 chr10 7842549 7842620 -137746668 - L1MB7 LINE L1 0 6184 6112 188 179 128 0 chr10 7842625 7842664 -137746624 + L2 LINE L2 3224 3267 -5 1657 176 59 7 chr10 7842781 7843195 -137746093 - L1MB5 LINE L1 -577 5603 5164 529 235 35 35 chr10 7843517 7843687 -137745601 - MER5B DNA MER1_type -8 170 1 2068 129 0 39 chr10 7844183 7844492 -137744796 - AluSx SINE Alu -15 297 1 202 308 0 0 chr10 7844578 7844643 -137744645 - MER5B DNA MER1_type -1 177 113 922 251 26 17 chr10 7844643 7844874 -137744414 + L1MB8 LINE L1 5945 6177 -1 451 277 29 78 chr10 7845909 7846151 -137743137 + MIR SINE MIR 6 235 -27 2727 45 0 0 chr10 7846201 7846512 -137742776 + AluY SINE Alu 1 311 0 741 149 75 15 chr10 7847347 7847481 -137741807 - FLAM_C SINE Alu 0 143 2 219 310 58 11 chr10 7847503 7847590 -137741698 - L2 LINE L2 -15 3257 3167 290 282 73 29 chr10 7848939 7849116 -137740172 - L1ME LINE L1 -339 5782 5599 26 0 0 0 chr10 7849138 7849164 -137740124 + AT_rich Low_complexity Low_complexity 1 26 0 2346 65 17 0 chr10 7849165 7849457 -137739831 + AluSg SINE Alu 1 297 -13 545 258 128 16 chr10 7850713 7851135 -137738153 + HAL1 LINE L1 1304 1809 -698 499 264 103 0 chr10 7851168 7851323 -137737965 + HsTC2 DNA Tc2 4 174 -1724 2085 197 64 34 chr10 7851489 7851957 -137737331 - LTR65 LTR ERV1 -20 649 168 207 0 0 0 chr10 7852542 7852565 -137736723 + (A)n Simple_repeat Simple_repeat 1 23 0 1905 151 3 44 chr10 7852574 7852891 -137736397 + AluJo SINE Alu 1 304 -8 207 204 0 0 chr10 7853926 7853970 -137735318 + GA-rich Low_complexity Low_complexity 1 44 0 710 141 8 0 chr10 7853997 7854125 -137735163 + GA-rich Low_complexity Low_complexity 4 132 0 180 125 0 0 chr10 7854143 7854175 -137735113 + (TGAA)n Simple_repeat Simple_repeat 2 33 0 1269 183 23 108 chr10 7855308 7855718 -137733570 + MLT1A2 LTR MaLR 1 374 0 255 348 90 7 chr10 7855749 7855904 -137733384 - MIR SINE MIR -94 168 1 1994 145 10 0 chr10 7856351 7856640 -137732648 + AluSx SINE Alu 1 292 -20 515 105 0 84 chr10 7856640 7856831 -137732457 + (TA)n Simple_repeat Simple_repeat 2 176 0 413 87 43 71 chr10 7856932 7857116 -137732172 + (CATAT)n Simple_repeat Simple_repeat 2 180 0 * 690 73 0 78 chr10 7857074 7857265 -137732023 + (TA)n Simple_repeat Simple_repeat 2 177 0 888 173 52 0 chr10 7857634 7857807 -137731481 + MER5A DNA MER1_type 2 183 -6 578 205 7 66 chr10 7858784 7858981 -137730307 - MLT1G1 LTR MaLR 0 567 418 758 200 190 5 chr10 7859121 7859321 -137729967 - MLT1G1 LTR MaLR -357 238 2 311 177 0 64 chr10 7859325 7859416 -137729872 - L1P4 LINE L1 -335 5839 5753 618 120 22 11 chr10 7859524 7859616 -137729672 + MER58A DNA MER1_type 42 134 0 875 237 69 0 chr10 7859636 7859881 -137729407 + MLT1H1 LTR MaLR 294 555 0 264 179 0 0 chr10 7859881 7859919 -137729369 + Charlie8 DNA MER1_type 2378 2415 -2 2174 87 30 33 chr10 7860254 7860553 -137728735 + AluY SINE Alu 1 298 -13 525 154 34 34 chr10 7861450 7861625 -137727663 + CT-rich Low_complexity Low_complexity 3 177 0 492 62 0 0 chr10 7861789 7861853 -137727435 + (TAGA)n Simple_repeat Simple_repeat 3 66 0 185 267 0 50 chr10 7862603 7862663 -137726625 - MIR3 SINE MIR -24 184 128 2259 111 3 3 chr10 7862746 7863044 -137726244 + AluSq SINE Alu 1 298 -15 1797 224 60 47 chr10 7863393 7863594 -137725694 + MER74B LTR ERVL 56 253 -369 1892 110 3 81 chr10 7863594 7863934 -137725354 + AluSx SINE Alu 1 316 0 1797 224 60 47 chr10 7863934 7864281 -137725007 + MER74B LTR ERVL 253 612 -10 245 284 7 54 chr10 7865107 7865255 -137724033 + L1ME4a LINE L1 5258 5398 -893 345 268 92 1 chr10 7865291 7865441 -137723847 + L1ME4a LINE L1 5386 5549 -613 2153 118 0 3 chr10 7865512 7865799 -137723489 - AluSx SINE Alu -25 287 2 482 218 81 24 chr10 7866184 7866308 -137722980 + MIR SINE MIR 12 142 -120 2167 106 0 7 chr10 7866338 7866620 -137722668 + AluSq SINE Alu 1 280 -33 1887 231 67 8 chr10 7866790 7867280 -137722008 + LTR40a LTR ERVL 1 519 0 22 0 0 0 chr10 7867422 7867444 -137721844 + AT_rich Low_complexity Low_complexity 1 22 0 1805 170 0 3 chr10 7868692 7868981 -137720307 - AluJo SINE Alu -24 288 1 22 56 0 0 chr10 7868986 7869022 -137720266 + AT_rich Low_complexity Low_complexity 1 36 0 267 244 13 13 chr10 7869110 7869188 -137720100 + L1ME4a LINE L1 5531 5608 -513 2425 76 7 0 chr10 7869206 7869507 -137719781 - AluSg SINE Alu -7 303 1 2234 92 3 20 chr10 7869507 7869812 -137719476 - AluSc SINE Alu -9 300 1 502 101 0 0 chr10 7869814 7869883 -137719405 - L1ME LINE L1 -565 5601 5533 903 280 92 30 chr10 7870142 7870510 -137718778 + MLT1I LTR MaLR 17 407 -2 291 254 0 0 chr10 7870510 7870581 -137718707 + L1ME4a LINE L1 5856 5926 -195 3075 118 53 45 chr10 7870902 7871508 -137717780 - MER4B LTR ERV1 0 779 1 2099 137 0 7 chr10 7871560 7871859 -137717429 + AluSx SINE Alu 1 297 -15 28 0 0 0 chr10 7871866 7871894 -137717394 + AT_rich Low_complexity Low_complexity 1 28 0 1728 174 30 21 chr10 7873373 7873707 -137715581 + MER1B DNA MER1_type 1 337 0 1893 142 0 23 chr10 7874167 7874469 -137714819 - AluJb SINE Alu -17 295 1 2209 101 11 0 chr10 7874547 7874833 -137714455 + AluSx SINE Alu 5 293 -19 267 237 172 0 chr10 7875791 7875884 -137713404 - MIR SINE MIR -6 256 148 256 204 74 0 chr10 7875904 7875958 -137713330 + MER69 DNA AcHobo 10 67 -2459 916 179 11 16 chr10 7875966 7876150 -137713138 + MER69 DNA AcHobo 2344 2526 0 617 234 0 0 chr10 7876150 7876287 -137713001 - MIR SINE MIR -92 170 34 2094 141 0 0 chr10 7876585 7876883 -137712405 + AluSx SINE Alu 1 298 -14 308 287 193 7 chr10 7876885 7877035 -137712253 + MER5A DNA MER1_type 12 189 0 429 237 192 5 chr10 7877282 7877480 -137711808 - MIR SINE MIR -17 245 11 439 272 130 24 chr10 7877862 7878079 -137711209 - MIR SINE MIR -28 234 1 22 70 0 0 chr10 7879201 7879244 -137710044 + GC_rich Low_complexity Low_complexity 1 43 0 194 351 0 0 chr10 7881585 7881642 -137707646 - L3b LINE CR1 -8 1575 1519 290 360 40 0 chr10 7882516 7882666 -137706622 + L2 LINE L2 3116 3271 -1 1496 156 113 11 chr10 7883188 7883470 -137705818 - AluSx SINE Alu -1 311 1 639 221 16 0 chr10 7883701 7883828 -137705460 + FLAM_A SINE Alu 10 138 -4 525 183 12 37 chr10 7883828 7883992 -137705296 + GA-rich Low_complexity Low_complexity 1 160 0 234 89 0 44 chr10 7884101 7884146 -137705142 + (GGGA)n Simple_repeat Simple_repeat 2 44 0 207 147 0 59 chr10 7884144 7884212 -137705076 + (GAAA)n Simple_repeat Simple_repeat 1 64 0 * 545 299 19 38 chr10 7884498 7884709 -137704579 + L1MC4a LINE L1 5576 5782 -2026 552 227 89 35 chr10 7884966 7885169 -137704119 + L1MC4a LINE L1 5787 6000 -1808 336 48 0 0 chr10 7885367 7885409 -137703879 + (GGA)n Simple_repeat Simple_repeat 2 43 0 351 0 0 0 chr10 7885549 7885588 -137703700 + (CA)n Simple_repeat Simple_repeat 1 39 0 2067 96 7 31 chr10 7885846 7886175 -137703113 - AluSc SINE Alu 0 323 2 2425 83 3 0 chr10 7887243 7887543 -137701745 - AluY SINE Alu -10 301 1 926 203 56 107 chr10 7888161 7888615 -137700673 + MLT1A2 LTR MaLR 1 370 -4 4218 194 37 73 chr10 7888862 7889054 -137700234 + L1MD2 LINE L1 5093 5290 -1069 2285 93 0 17 chr10 7889054 7889354 -137699934 + AluSq SINE Alu 1 295 -18 4218 194 37 73 chr10 7889354 7889801 -137699487 + L1MD2 LINE L1 5290 5751 -608 1758 166 14 0 chr10 7889801 7890085 -137699203 - AluJo SINE Alu -19 293 6 4218 194 37 73 chr10 7890085 7890296 -137698992 + L1MD2 LINE L1 5751 5968 -391 2062 119 0 58 chr10 7890296 7890624 -137698664 + AluSg SINE Alu 2 310 0 4218 194 37 73 chr10 7890624 7890885 -137698403 + L1MD2 LINE L1 5968 6157 -202 339 25 0 0 chr10 7890885 7890925 -137698363 + (CA)n Simple_repeat Simple_repeat 1 40 0 4218 194 37 73 chr10 7890925 7891120 -137698168 + L1MD2 LINE L1 6157 6357 -2 1221 163 37 20 chr10 7891239 7891484 -137697804 - MLT2D LTR ERVL -165 249 1 1526 97 5 7 chr10 7891556 7891910 -137697378 - MSTA LTR MaLR 0 428 1 455 164 0 0 chr10 7892072 7892145 -137697143 + L1MB5 LINE L1 6069 6141 -33 2002 112 14 20 chr10 7892150 7892445 -137696843 + AluSx SINE Alu 3 295 -17 24 32 0 0 chr10 7892451 7892482 -137696806 + AT_rich Low_complexity Low_complexity 1 31 0 768 204 42 11 chr10 7893048 7893239 -137696049 - MIR SINE MIR 0 262 66 1364 195 101 0 chr10 7893423 7893552 -137695736 + AluJo SINE Alu 5 160 -152 730 210 65 0 chr10 7893552 7893692 -137695596 + FRAM SINE Alu 1 208 0 1158 100 0 6 chr10 7893692 7893872 -137695416 + (GAAA)n Simple_repeat Simple_repeat 2 180 0 752 144 6 24 chr10 7893888 7894055 -137695233 + GA-rich Low_complexity Low_complexity 1 164 0 507 28 0 28 chr10 7894157 7894229 -137695059 + (GGAA)n Simple_repeat Simple_repeat 3 72 0 8684 179 41 14 chr10 7894233 7895261 -137694027 + L1PA16 LINE L1 3342 4340 -1826 237 33 0 0 chr10 7895261 7895291 -137693997 + (CA)n Simple_repeat Simple_repeat 1 30 0 8684 179 41 14 chr10 7895291 7897015 -137692273 + L1PA16 LINE L1 4340 6165 -1 1841 94 102 0 chr10 7897175 7897454 -137691834 + AluSx SINE Alu 1 305 0 331 277 34 20 chr10 7897671 7897819 -137691469 + L1MC5 LINE L1 7636 7785 -176 1633 175 11 3 chr10 7897821 7898106 -137691182 + AluJo SINE Alu 1 287 -25 29 28 0 0 chr10 7898107 7898143 -137691145 + AT_rich Low_complexity Low_complexity 1 36 0 195 358 51 12 chr10 7898240 7898418 -137690870 + L2 LINE L2 2852 3037 -276 856 244 105 4 chr10 7898692 7898930 -137690358 - MIR SINE MIR 0 262 1 1584 92 30 0 chr10 7899853 7900195 -137689093 + L1P4 LINE L1 5141 5489 -685 315 141 0 2 chr10 7900197 7900442 -137688846 + AluSx SINE Alu 1 296 -4 5780 71 0 4 chr10 7900442 7901144 -137688144 + L1PA11 LINE L1 5476 6174 0 1180 254 76 25 chr10 7901350 7901731 -137687557 + MLT1I LTR MaLR 13 409 0 1352 245 82 18 chr10 7902019 7902467 -137686821 - MER20B DNA MER1_type 0 783 307 1527 226 74 6 chr10 7902467 7902607 -137686681 + MLT1A2 LTR MaLR 1 130 -244 2178 97 0 3 chr10 7902607 7902896 -137686392 + AluY SINE Alu 23 310 -1 1527 226 74 6 chr10 7902896 7903091 -137686197 + MLT1A2 LTR MaLR 130 359 -15 680 273 59 52 chr10 7903102 7903211 -137686077 - MER20B DNA MER1_type -472 311 204 2401 111 47 39 chr10 7903211 7903572 -137685716 - THE1B LTR MaLR 0 364 1 12139 104 10 1 chr10 7903572 7905138 -137684150 - THE1B-int LTR MaLR 0 1580 1 2273 123 53 34 chr10 7905138 7905495 -137683793 - THE1B LTR MaLR 0 364 1 680 273 59 52 chr10 7905495 7905669 -137683619 - MER20B DNA MER1_type -578 205 24 3763 206 76 52 chr10 7905793 7906159 -137683129 - Tigger6a DNA MER2_type -519 1078 723 378 0 0 0 chr10 7906159 7906201 -137683087 + (TG)n Simple_repeat Simple_repeat 2 43 0 3763 206 76 52 chr10 7906201 7906883 -137682405 - Tigger6a DNA MER2_type -874 723 4 2510 78 0 0 chr10 7907065 7907371 -137681917 - AluY SINE Alu -5 306 1 2258 84 3 0 chr10 7907816 7908102 -137681186 + AluSp SINE Alu 2 288 -25 1308 154 70 40 chr10 7908123 7908395 -137680893 - AluJo SINE Alu -30 282 3 273 260 30 20 chr10 7909331 7909431 -137679857 - L2 LINE L2 -1 3312 3212 52 64 0 0 chr10 7909955 7910049 -137679239 + AT_rich Low_complexity Low_complexity 1 94 0 2097 121 0 23 chr10 7910070 7910377 -137678911 - AluSx SINE Alu -12 300 1 21 0 0 0 chr10 7910465 7910486 -137678802 + AT_rich Low_complexity Low_complexity 1 21 0 23 0 0 0 chr10 7910585 7910608 -137678680 + AT_rich Low_complexity Low_complexity 1 23 0 255 295 0 26 chr10 7910803 7910881 -137678407 - L2 LINE L2 -1 3312 3237 1735 172 0 10 chr10 7911119 7911410 -137677878 - AluJb SINE Alu -24 288 1 229 148 19 37 chr10 7911585 7911639 -137677649 + C-rich Low_complexity Low_complexity 4 56 0 244 341 161 0 chr10 7912083 7912288 -137677000 - L2 LINE L2 -480 2834 2597 2410 72 7 3 chr10 7912391 7912695 -137676593 + AluSq SINE Alu 1 305 -8 2133 103 3 0 chr10 7913674 7913964 -137675324 - AluSx SINE Alu -21 291 1 1565 163 48 38 chr10 7913969 7914258 -137675030 - AluJo SINE Alu -10 292 1 488 121 0 0 chr10 7914970 7915036 -137674252 - AluS SINE Alu -246 67 2 275 149 37 0 chr10 7915554 7915661 -137673627 + (TATAA)n Simple_repeat Simple_repeat 4 114 0 479 88 67 47 chr10 7915682 7916355 -137672933 + (TATAA)n Simple_repeat Simple_repeat 1 686 0 30 45 0 0 chr10 7916365 7916409 -137672879 + AT_rich Low_complexity Low_complexity 1 44 0 258 227 57 11 chr10 7916419 7916507 -137672781 + L1MC4 LINE L1 6615 6706 -1336 268 330 27 9 chr10 7916571 7916683 -137672605 + Charlie2 DNA MER1_type 18 131 -2651 2169 216 64 82 chr10 7916797 7917493 -137671795 + Charlie2 DNA MER1_type 1869 2576 -286 1626 203 7 3 chr10 7917493 7917783 -137671505 - AluJb SINE Alu -21 291 1 2169 216 64 82 chr10 7917783 7917894 -137671394 + Charlie2 DNA MER1_type 2576 2661 -201 2334 106 3 3 chr10 7917894 7918206 -137671082 + AluSx SINE Alu 1 312 0 2169 216 64 82 chr10 7918206 7918272 -137671016 + Charlie2 DNA MER1_type 2661 2727 -135 726 155 31 54 chr10 7918372 7918501 -137670787 - AluJo SINE Alu -100 212 87 352 267 10 20 chr10 7918503 7918604 -137670684 + Charlie2 DNA MER1_type 2761 2860 -2 2062 126 3 0 chr10 7919167 7919453 -137669835 - AluJb SINE Alu -25 287 1 2065 148 32 42 chr10 7919464 7919842 -137669446 - L1MC1 LINE L1 0 6333 5960 200 284 34 45 chr10 7920064 7920152 -137669136 - MER5B DNA MER1_type -67 111 25 615 122 0 0 chr10 7920472 7920554 -137668734 + AluY SINE Alu 2 83 -228 899 247 131 0 chr10 7920573 7920840 -137668448 + L1ME3 LINE L1 5830 6131 -31 2346 84 3 3 chr10 7920840 7921148 -137668140 + AluY SINE Alu 1 308 -3 1948 123 3 0 chr10 7922115 7922399 -137666889 - AluSg SINE Alu -4 306 22 1815 112 8 0 chr10 7922649 7922899 -137666389 + AluSx SINE Alu 1 252 -60 293 141 0 4 chr10 7922947 7923000 -137666288 + Alu SINE Alu 250 290 -11 754 186 16 0 chr10 7923202 7923326 -137665962 - FLAM_C SINE Alu -16 127 2 772 316 35 23 chr10 7923982 7924324 -137664964 + L1MC4a LINE L1 5567 5912 -1896 228 244 0 0 chr10 7924357 7924402 -137664886 - L1MC4 LINE L1 -1340 6702 6658 1375 99 6 0 chr10 7924537 7924718 -137664570 - AluSg/x SINE Alu -14 296 115 233 224 0 35 chr10 7925288 7925346 -137663942 + CT-rich Low_complexity Low_complexity 2 57 0 2453 90 3 0 chr10 7925788 7926099 -137663189 + AluSp SINE Alu 1 312 -1 989 244 9 18 chr10 7926173 7926394 -137662894 - MER20 DNA MER1_type 0 219 1 550 243 97 138 chr10 7926435 7926950 -137662338 - L2 LINE L2 0 3313 2820 * 3132 288 109 6 chr10 7926940 7928226 -137661062 - L2 LINE L2 -706 2608 1191 1819 148 0 48 chr10 7929880 7930190 -137659098 - AluJb SINE Alu -12 300 6 2009 127 27 7 chr10 7930532 7930832 -137658456 + AluJb SINE Alu 2 307 -5 1659 169 3 40 chr10 7932036 7932337 -137656951 + AluJo SINE Alu 2 291 -21 1935 92 4 15 chr10 7932354 7932615 -137656673 + AluSq SINE Alu 1 258 -55 375 113 0 0 chr10 7932630 7932692 -137656596 + (TA)n Simple_repeat Simple_repeat 2 63 0 2298 114 0 13 chr10 7932960 7933276 -137656012 - AluSx SINE Alu 0 312 1 2004 136 17 0 chr10 7934071 7934365 -137654923 - AluJo SINE Alu -13 299 1 844 183 69 137 chr10 7934666 7934972 -137654316 - MLT2D LTR ERVL 0 414 130 1225 106 0 0 chr10 7934972 7935133 -137654155 - AluSg/x SINE Alu -15 295 135 779 178 0 34 chr10 7935862 7936008 -137653280 + FLAM_C SINE Alu 2 142 -1 1893 5 0 0 chr10 7936298 7936502 -137652786 + AluYb8 SINE Alu 115 318 0 4695 160 28 20 chr10 7936552 7937460 -137651828 + L1MC1 LINE L1 5188 6103 -230 195 288 50 12 chr10 7937952 7938032 -137651256 - MIR SINE MIR -12 250 168 1992 146 0 16 chr10 7938478 7938786 -137650502 + AluJo SINE Alu 1 303 -9 2321 93 3 3 chr10 7938788 7939090 -137650198 + AluSc SINE Alu 6 307 -2 923 138 0 0 chr10 7939377 7939507 -137649781 + FLAM_C SINE Alu 1 130 -3 2934 144 35 38 chr10 7939512 7939586 -137649702 + L1MB7 LINE L1 5514 5587 -597 2934 166 16 14 chr10 7939586 7940101 -137649187 + L1MB7 LINE L1 5655 6172 -12 2934 144 35 38 chr10 7940101 7940124 -137649164 + L1MB7 LINE L1 5587 6172 -12 22 0 0 0 chr10 7940577 7940599 -137648689 + AT_rich Low_complexity Low_complexity 1 22 0 473 285 149 17 chr10 7940801 7941168 -137648120 + MLT1J2 LTR MaLR 1 476 -35 509 286 119 62 chr10 7941372 7941599 -137647689 + MIR SINE MIR 8 247 -15 2196 100 7 0 chr10 7941648 7941982 -137647306 + AluSx SINE Alu 1 336 0 255 125 0 0 chr10 7942016 7942056 -137647232 + (ATG)n Simple_repeat Simple_repeat 3 42 0 2126 98 21 0 chr10 7942509 7942795 -137646493 - AluSx SINE Alu -15 297 6 393 278 70 27 chr10 7943962 7944149 -137645139 + L1ME4a LINE L1 5927 6121 0 1756 211 66 63 chr10 7944767 7944971 -137644317 + L1ME1 LINE L1 5569 5771 -395 2060 112 80 0 chr10 7944971 7945285 -137644003 + MER44D DNA MER2_type 1 609 0 1756 211 66 63 chr10 7945285 7945671 -137643617 + L1ME1 LINE L1 5771 6161 -5 1710 116 113 72 chr10 7945949 7946161 -137643127 + MER46B DNA MER2_type 1 109 -2622 2045 151 3 0 chr10 7946161 7946460 -137642828 + AluSx SINE Alu 11 310 -2 1710 116 113 72 chr10 7946460 7946593 -137642695 + MER46B DNA MER2_type 109 235 -1 2248 127 0 0 chr10 7947405 7947713 -137641575 + AluSx SINE Alu 1 308 -4 317 130 0 0 chr10 7947787 7947833 -137641455 + MADE1 DNA Mariner 1 46 -34 22 35 0 0 chr10 7948443 7948472 -137640816 + AT_rich Low_complexity Low_complexity 1 29 0 2387 93 3 3 chr10 7949308 7949610 -137639678 + AluSp SINE Alu 1 302 -11 1146 183 14 10 chr10 7949613 7949821 -137639467 + AluJo SINE Alu 6 214 -98 284 116 0 55 chr10 7949823 7949883 -137639405 + FLAM SINE Alu 82 132 -1 35 92 0 0 chr10 7949940 7950038 -137639250 + AT_rich Low_complexity Low_complexity 1 98 0 2214 114 0 3 chr10 7951171 7951468 -137637820 + AluSg SINE Alu 1 296 -14 22 0 0 0 chr10 7951565 7951587 -137637701 + AT_rich Low_complexity Low_complexity 1 22 0 193 354 40 10 chr10 7951814 7951913 -137637375 + L2 LINE L2 3148 3249 -23 2166 107 0 29 chr10 7952004 7952314 -137636974 + AluSx SINE Alu 1 301 -11 2015 147 6 16 chr10 7952667 7952981 -137636307 + AluSx SINE Alu 1 311 -1 2263 117 3 0 chr10 7953169 7953476 -137635812 + AluSx SINE Alu 5 312 0 2395 79 0 0 chr10 7954370 7954660 -137634628 - AluSx SINE Alu -22 290 1 440 318 100 35 chr10 7955205 7955516 -137633772 - L3 LINE CR1 -521 1056 726 2294 121 0 6 chr10 7956040 7956355 -137632933 + AluSq SINE Alu 1 313 0 1471 209 58 62 chr10 7957259 7957762 -137631526 + MLT1D LTR MaLR 5 505 0 1117 181 23 9 chr10 7958403 7958624 -137630664 + MER58A DNA MER1_type 1 224 0 860 121 0 50 chr10 7958969 7959109 -137630179 + FLAM_A SINE Alu 1 133 0 641 238 88 59 chr10 7959531 7959804 -137629484 + MLT1L LTR MaLR 2 282 -333 346 242 91 10 chr10 7959916 7960015 -137629273 + MLT1L LTR MaLR 500 606 -9 22 35 0 0 chr10 7960147 7960176 -137629112 + AT_rich Low_complexity Low_complexity 1 29 0 2378 90 0 10 chr10 7960376 7960677 -137628611 + AluSg SINE Alu 1 298 -12 1827 139 4 4 chr10 7960688 7960962 -137628326 + AluSx SINE Alu 1 274 -38 1735 86 0 9 chr10 7960963 7961185 -137628103 + AluSg/x SINE Alu 87 306 -6 1675 161 16 30 chr10 7961196 7961501 -137627787 + AluJo SINE Alu 1 301 -11 690 198 10 134 chr10 7961694 7961970 -137627318 + L1ME3 LINE L1 5930 6170 0 2239 92 0 23 chr10 7962044 7962347 -137626941 + AluSx SINE Alu 1 296 -16 344 227 42 8 chr10 7962347 7962457 -137626831 + L2 LINE L2 3194 3310 -3 2204 119 0 0 chr10 7962887 7963197 -137626091 + AluSg SINE Alu 1 310 0 2151 110 7 0 chr10 7963554 7963856 -137625432 + AluSx SINE Alu 1 304 0 1816 136 39 29 chr10 7963946 7964254 -137625034 - MER2 DNA MER2_type -34 311 1 2058 142 0 19 chr10 7964819 7965129 -137624159 - AluSq SINE Alu -9 304 1 206 345 35 23 chr10 7965433 7965520 -137623768 - L2 LINE L2 -35 3237 3150 1569 167 92 4 chr10 7965898 7966016 -137623272 + AluJb SINE Alu 1 107 -205 225 0 0 0 chr10 7966016 7966041 -137623247 + (CA)n Simple_repeat Simple_repeat 2 26 0 1569 167 92 4 chr10 7966041 7966203 -137623085 + AluJb SINE Alu 107 306 -6 2016 131 3 7 chr10 7966204 7966510 -137622778 + AluSq SINE Alu 2 306 -7 517 170 107 0 chr10 7966525 7966637 -137622651 + Charlie1 DNA MER1_type 2622 2745 -16 186 308 22 33 chr10 7966785 7966876 -137622412 - L3 LINE CR1 -957 620 531 748 165 0 0 chr10 7967360 7967481 -137621807 + FLAM_C SINE Alu 12 132 -11 2161 120 0 3 chr10 7967923 7968222 -137621066 + AluSx SINE Alu 1 298 -14 739 136 36 0 chr10 7968224 7968334 -137620954 - AluJo/FLAM SINE Alu -192 120 7 434 228 205 29 chr10 7968356 7968527 -137620761 - MIR SINE MIR -2 260 60 347 284 0 0 chr10 7968804 7968906 -137620382 + MIR3 SINE MIR 91 192 -16 1929 141 7 34 chr10 7969379 7969677 -137619611 + AluJb SINE Alu 1 290 -22 2454 74 7 7 chr10 7969685 7969995 -137619293 + AluY SINE Alu 1 310 -1 198 0 0 0 chr10 7970696 7970718 -137618570 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 1870 155 13 23 chr10 7970734 7971037 -137618251 + AluSx SINE Alu 1 300 -12 2317 109 3 0 chr10 7971214 7971525 -137617763 - AluSx SINE Alu 0 312 1 1286 193 41 4 chr10 7971985 7972229 -137617059 + AluJb SINE Alu 1 253 -59 29 0 0 0 chr10 7972614 7972643 -137616645 + AT_rich Low_complexity Low_complexity 1 29 0 377 199 69 30 chr10 7973289 7973420 -137615868 + MIR SINE MIR 126 261 -1 2244 81 7 0 chr10 7974299 7974594 -137614694 + L1PA7 LINE L1 5858 6154 0 1404 163 68 44 chr10 7974942 7975236 -137614052 + AluJo SINE Alu 7 307 -5 373 305 17 129 chr10 7975999 7976347 -137612941 - L2 LINE L2 -35 3237 2929 21 0 0 0 chr10 7976442 7976463 -137612825 + AT_rich Low_complexity Low_complexity 1 21 0 2206 124 3 0 chr10 7977070 7977376 -137611912 - AluSq SINE Alu -5 308 2 186 235 20 0 chr10 7978749 7978800 -137610488 - L3 LINE CR1 -1 1576 1525 299 271 192 6 chr10 7979107 7979284 -137610004 - L3 LINE CR1 -48 1529 1320 444 246 39 68 chr10 7979319 7979371 -137609917 + L1MC5 LINE L1 7717 7769 -192 2547 51 3 0 chr10 7979371 7979664 -137609624 - AluY SINE Alu -17 294 1 444 246 39 68 chr10 7979664 7979818 -137609470 + L1MC5 LINE L1 7769 7917 -44 233 376 102 0 chr10 7979843 7980040 -137609248 - L3 LINE CR1 -310 1267 1051 2864 84 0 0 chr10 7980434 7980813 -137608475 - L1PA8 LINE L1 0 6172 5794 445 277 97 9 chr10 7981201 7981390 -137607898 - MER20B DNA MER1_type -8 211 6 1241 217 125 9 chr10 7981627 7981954 -137607334 - MLT1A1 LTR MaLR 0 365 1 2134 134 0 0 chr10 7982351 7982650 -137606638 + AluY SINE Alu 1 299 -12 1282 199 83 11 chr10 7983235 7983501 -137605787 - AluJo SINE Alu -27 285 1 2661 42 0 3 chr10 7983678 7983984 -137605304 - AluY SINE Alu -6 305 1 306 220 34 0 chr10 7984361 7984420 -137604868 - MER2 DNA MER2_type 0 345 285 * 412 231 115 15 chr10 7984412 7984542 -137604746 - MER2 DNA MER2_type -96 143 1 2275 106 0 0 chr10 7984653 7984945 -137604343 + AluSc SINE Alu 1 292 -17 225 264 19 0 chr10 7985014 7985067 -137604221 - L2 LINE L2 -27 3286 3233 1237 210 52 21 chr10 7985250 7985540 -137603748 - AluSx SINE Alu -13 299 1 1592 133 18 0 chr10 7985566 7985791 -137603497 - AluSq SINE Alu -82 231 3 1682 172 3 10 chr10 7985967 7986263 -137603025 + AluSx SINE Alu 1 294 -18 2326 89 7 20 chr10 7986465 7986768 -137602520 - AluSq SINE Alu -14 299 1 1054 210 109 58 chr10 7987512 7987959 -137601329 - MLT1D LTR MaLR -5 462 1 1818 122 22 0 chr10 7988043 7988313 -137600975 - L1PA15 LINE L1 -3 6162 5887 430 250 21 0 chr10 7988771 7988867 -137600421 - MER91A DNA MER1_type -2 194 97 1378 152 0 17 chr10 7989076 7989307 -137599981 + AluJo SINE Alu 86 312 0 489 141 0 0 chr10 7989323 7989404 -137599884 + L1PB4 LINE L1 5874 5954 -200 760 235 7 0 chr10 7989516 7989665 -137599623 + L1PB4 LINE L1 6000 6149 -7 188 300 14 14 chr10 7991820 7991890 -137597398 + L2 LINE L2 2747 2816 -498 920 149 0 0 chr10 7992326 7992629 -137596659 + (GAGTG)n Simple_repeat Simple_repeat 1 303 0 233 224 0 35 chr10 7993161 7993219 -137596069 + CT-rich Low_complexity Low_complexity 2 57 0 2439 90 3 3 chr10 7993661 7993973 -137595315 + AluSp SINE Alu 1 312 -1 918 244 9 18 chr10 7994047 7994268 -137595020 - MER20 DNA MER1_type 0 219 1 408 245 99 140 chr10 7994309 7994824 -137594464 - L2 LINE L2 0 3313 2820 2761 289 104 5 chr10 7994863 7996100 -137593188 - L2 LINE L2 -764 2550 1191 1819 148 0 48 chr10 7997754 7998064 -137591224 - AluJb SINE Alu -12 300 6 2135 106 3 3 chr10 7998406 7998690 -137590598 + AluSq SINE Alu 2 285 -28 537 141 113 42 chr10 7998705 7998847 -137590441 + Charlie1 DNA MER1_type 2604 2755 -6 485 241 25 137 chr10 7998928 7999030 -137590258 - MIR SINE MIR -38 224 163 1994 132 0 0 chr10 7999030 7999325 -137589963 - AluSg SINE Alu -15 295 1 485 241 25 137 chr10 7999325 7999463 -137589825 - MIR SINE MIR -99 163 11 327 134 152 27 chr10 8000679 8000791 -137588497 + MER113 DNA MER1_type? 123 248 -273 1803 160 7 17 chr10 8000931 8001231 -137588057 + AluJo SINE Alu 1 297 -15 543 239 99 72 chr10 8001240 8001598 -137587690 + L1MC4 LINE L1 7083 7458 -584 1848 163 3 10 chr10 8001598 8001899 -137587389 + AluJb SINE Alu 1 299 -13 543 239 99 72 chr10 8001899 8001938 -137587350 + L1MC4 LINE L1 7458 7494 -548 1976 124 3 65 chr10 8002141 8002464 -137586824 + AluSx SINE Alu 1 303 -9 1418 154 0 0 chr10 8002549 8002769 -137586519 + L1MC1 LINE L1 6013 6232 -101 254 257 34 40 chr10 8002877 8003025 -137586263 + L1MC5 LINE L1 7631 7777 -184 1555 197 47 63 chr10 8003074 8003454 -137585834 + MLT1A2 LTR MaLR 1 374 0 612 252 28 69 chr10 8003752 8003970 -137585318 - MIR SINE MIR -53 209 1 230 239 0 0 chr10 8003970 8004014 -137585274 + L2 LINE L2 3266 3309 -4 569 254 73 6 chr10 8007339 8007516 -137581772 + MIR SINE MIR 33 221 -41 2379 91 0 0 chr10 8007650 8007946 -137581342 + AluSc SINE Alu 1 296 -13 595 190 0 50 chr10 8008913 8009034 -137580254 + AluJb SINE Alu 181 295 -17 3597 240 167 30 chr10 8009034 8009743 -137579545 - L1MC2 LINE L1 -214 6130 5520 2291 87 3 7 chr10 8009743 8010042 -137579246 - AluSg SINE Alu -12 298 1 3597 240 167 30 chr10 8010042 8011437 -137577851 - L1MC2 LINE L1 -824 5520 3701 27 29 0 0 chr10 8011762 8011796 -137577492 + AT_rich Low_complexity Low_complexity 1 34 0 2552 57 0 0 chr10 8013212 8013513 -137575775 - AluY SINE Alu -10 301 1 608 227 37 114 chr10 8013866 8014139 -137575149 - MIR SINE MIR -2 260 9 2265 103 0 22 chr10 8014851 8015034 -137574254 - AluSx SINE Alu 0 312 137 2093 86 41 7 chr10 8015034 8015325 -137573963 - AluY SINE Alu -10 301 1 2265 103 0 22 chr10 8015325 8015460 -137573828 - AluSx SINE Alu -175 137 1 2169 80 7 0 chr10 8016836 8017111 -137572177 - AluY SINE Alu -21 290 14 2359 101 0 0 chr10 8017116 8017423 -137571865 - AluSx SINE Alu -5 307 1 353 242 124 25 chr10 8017814 8017975 -137571313 + MER104 DNA Tc2 4 180 0 1838 134 180 0 chr10 8018191 8018497 -137570791 - MER46B DNA MER2_type 0 236 1 797 157 109 58 chr10 8019923 8020196 -137569092 + MER2 DNA MER2_type 2 320 -25 216 307 158 16 chr10 8020286 8020413 -137568875 - L2 LINE L2 -5 3308 3164 381 214 111 56 chr10 8020576 8020702 -137568586 - L2 LINE L2 -9 3304 3172 452 225 217 0 chr10 8020735 8020864 -137568424 + MER58C DNA MER1_type 59 215 0 448 323 90 62 chr10 8020943 8021398 -137567890 + L2 LINE L2 2804 3271 -1 288 194 56 14 chr10 8021754 8021826 -137567462 + MIR SINE MIR 77 151 -111 2528 69 0 0 chr10 8022090 8022395 -137566893 + AluY SINE Alu 1 305 -6 1724 145 4 0 chr10 8022426 8022674 -137566614 + AluJo SINE Alu 1 249 -63 2370 68 10 7 chr10 8022994 8023290 -137565998 + AluSx SINE Alu 1 297 -15 905 159 173 30 chr10 8023896 8024149 -137565139 - Charlie1b DNA MER1_type -244 279 1 1832 123 55 44 chr10 8024678 8024971 -137564317 + AluSx SINE Alu 1 296 -16 22 94 0 0 chr10 8025195 8025259 -137564029 + AT_rich Low_complexity Low_complexity 1 64 0 195 42 0 0 chr10 8025558 8025582 -137563706 + (TG)n Simple_repeat Simple_repeat 1 24 0 831 139 44 63 chr10 8025582 8025735 -137563553 - AluJo SINE Alu -158 154 5 493 225 231 0 chr10 8025891 8026064 -137563224 + MIR SINE MIR 45 257 -5 344 251 124 115 chr10 8026107 8026430 -137562858 - L2 LINE L2 -20 3252 2927 1801 146 43 0 chr10 8026662 8026943 -137562345 - AluSx SINE Alu -19 293 1 480 184 39 0 chr10 8027522 8027625 -137561663 - L1MB7 LINE L1 -14 6170 6064 197 250 59 88 chr10 8027676 8027744 -137561544 - L2 LINE L2 -52 3220 3155 233 275 20 114 chr10 8027757 8027906 -137561382 - L2 LINE L2 -954 2360 2226 1483 167 4 0 chr10 8027979 8028212 -137561076 + AluJb SINE Alu 2 235 -77 1180 145 0 0 chr10 8028212 8028384 -137560904 + AluSg/x SINE Alu 136 307 -3 1577 267 37 12 chr10 8028410 8028561 -137560727 + L1MC4a LINE L1 6453 6599 -1209 2262 76 10 3 chr10 8028561 8028852 -137560436 + AluSx SINE Alu 2 294 -18 1577 267 37 12 chr10 8028852 8029183 -137560105 + L1MC4a LINE L1 6599 6947 -861 1947 107 55 4 chr10 8029205 8029499 -137559789 + AluSq SINE Alu 2 309 0 283 280 19 0 chr10 8029506 8029613 -137559675 + L1MC4 LINE L1 7689 7797 -245 1064 211 118 7 chr10 8029628 8029932 -137559356 + LTR16A LTR ERVL 16 353 -97 305 271 0 12 chr10 8029935 8030020 -137559268 + C-rich Low_complexity Low_complexity 4 87 0 294 227 94 70 chr10 8030029 8030157 -137559131 + LTR16A LTR ERVL 320 450 0 646 202 82 91 chr10 8030158 8030401 -137558887 + HERV16 LTR ERVL 2 242 -4754 1161 292 85 16 chr10 8030530 8031503 -137557785 + HERV16 LTR ERVL 1584 2670 -2326 1206 185 39 5 chr10 8031503 8031708 -137557580 + Tigger5 DNA MER2_type 1 212 -2111 272 146 0 0 chr10 8031721 8031762 -137557526 + MERVL LTR ERVL 4353 4393 -1092 784 358 26 18 chr10 8031809 8032025 -137557263 + MERVL LTR ERVL 4525 4738 -1026 1291 195 30 47 chr10 8032025 8032323 -137556965 - AluJo SINE Alu -15 297 5 784 358 26 18 chr10 8032323 8032562 -137556726 + MERVL LTR ERVL 4738 4984 -780 736 264 122 30 chr10 8033064 8033393 -137555895 + LTR16A LTR ERVL 92 450 0 755 239 32 24 chr10 8033405 8033652 -137555636 + L1MC4 LINE L1 7793 8041 -1 241 368 19 7 chr10 8033728 8033883 -137555405 - L2 LINE L2 -1291 2023 1867 234 0 0 0 chr10 8034445 8034471 -137554817 + (A)n Simple_repeat Simple_repeat 1 26 0 395 186 21 21 chr10 8034517 8034614 -137554674 + MER96B DNA MER1_type? 278 374 -43 185 378 141 15 chr10 8036477 8036747 -137552541 + L2 LINE L2 2674 2977 -337 213 195 0 0 chr10 8036949 8036990 -137552298 + L2 LINE L2 3273 3313 0 1959 151 0 0 chr10 8037095 8037387 -137551901 - AluJo SINE Alu -20 292 1 225 0 0 0 chr10 8037532 8037557 -137551731 + (CTAGG)n Simple_repeat Simple_repeat 2 26 0 284 315 56 0 chr10 8037961 8038050 -137551238 - L2 LINE L2 -9 3263 3170 925 190 0 6 chr10 8039559 8039722 -137549566 + AluJb SINE Alu 137 298 -14 410 236 22 0 chr10 8039790 8039879 -137549409 - L2 LINE L2 -4 3309 3219 1628 182 3 18 chr10 8039942 8040228 -137549060 + AluJo SINE Alu 1 282 -30 2315 91 7 0 chr10 8040228 8040525 -137548763 - AluSg SINE Alu -11 299 1 21 0 0 0 chr10 8040563 8040584 -137548704 + AT_rich Low_complexity Low_complexity 1 21 0 22 35 0 0 chr10 8040834 8040863 -137548425 + AT_rich Low_complexity Low_complexity 1 29 0 3534 155 37 28 chr10 8041930 8042580 -137546708 - L1MB3 LINE L1 -14 6169 5514 206 32 32 0 chr10 8043030 8043061 -137546227 + (TTTTG)n Simple_repeat Simple_repeat 1 32 0 306 275 70 76 chr10 8043794 8043965 -137545323 + MIR SINE MIR 63 232 -30 1476 137 111 19 chr10 8043980 8044091 -137545197 + AluJo SINE Alu 1 100 -212 2512 68 3 0 chr10 8044091 8044400 -137544888 + AluY SINE Alu 1 310 -1 1476 137 111 19 chr10 8044400 8044559 -137544729 + AluJo SINE Alu 100 296 -16 1029 152 0 0 chr10 8044693 8044844 -137544444 + FAM SINE Alu 16 166 -19 2482 78 13 0 chr10 8045343 8045649 -137543639 + AluSx SINE Alu 1 310 -2 3939 176 14 12 chr10 8045758 8046518 -137542770 - L1MC3 LINE L1 -3 7782 7021 254 159 26 142 chr10 8046845 8046958 -137542330 - L1ME3A LINE L1 -106 6064 5965 929 159 28 0 chr10 8047066 8047248 -137542040 - AluSg/x SINE Alu -3 307 121 24 67 0 0 chr10 8048380 8048425 -137540863 + AT_rich Low_complexity Low_complexity 1 45 0 1644 128 84 0 chr10 8048602 8048853 -137540435 - AluSx SINE Alu -18 294 23 263 342 129 13 chr10 8049372 8049527 -137539761 + MIR SINE MIR 20 192 -70 1411 264 76 9 chr10 8050415 8050865 -137538423 - MLT1E2 LTR MaLR 0 626 147 967 258 42 31 chr10 8051009 8051366 -137537922 - HAL1 LINE L1 -904 1603 1243 1586 151 50 7 chr10 8051371 8051650 -137537638 - AluJo SINE Alu 0 312 22 257 123 38 54 chr10 8051750 8051806 -137537482 - AluJo SINE Alu -261 42 1 319 279 62 0 chr10 8051806 8051935 -137537353 - HAL1 LINE L1 -1265 1242 1106 444 314 85 44 chr10 8051935 8052095 -137537193 - MLT1L LTR MaLR 0 615 463 2464 82 3 0 chr10 8052095 8052401 -137536887 + AluSx SINE Alu 1 307 -5 444 314 85 44 chr10 8052401 8052559 -137536729 - MLT1L LTR MaLR -152 463 284 376 317 113 52 chr10 8052566 8053080 -137536208 - HAL1 LINE L1 -1505 1002 458 227 244 197 16 chr10 8053633 8053760 -137535528 + L1ME4a LINE L1 5892 6041 -80 23 0 0 0 chr10 8054497 8054520 -137534768 + AT_rich Low_complexity Low_complexity 1 23 0 22 35 0 0 chr10 8054752 8054781 -137534507 + AT_rich Low_complexity Low_complexity 1 29 0 22 0 0 0 chr10 8055448 8055470 -137533818 + AT_rich Low_complexity Low_complexity 1 22 0 376 212 46 129 chr10 8055646 8055887 -137533401 - L1MC4 LINE L1 -87 7955 7735 2163 100 4 0 chr10 8055900 8056179 -137533109 + AluSp SINE Alu 27 306 -7 758 290 122 12 chr10 8056233 8056661 -137532627 - L1MC4 LINE L1 -537 7505 7031 1422 194 15 7 chr10 8056687 8056960 -137532328 + AluJo SINE Alu 15 289 -23 1027 201 24 36 chr10 8056961 8057210 -137532078 - L1MC4 LINE L1 -1013 7029 6784 299 329 66 51 chr10 8058123 8058260 -137531028 + L2 LINE L2 3134 3272 0 1051 260 100 57 chr10 8058410 8058921 -137530367 + Charlie8 DNA MER1_type 12 544 -1873 2295 92 0 10 chr10 8059331 8059626 -137529662 + AluSg SINE Alu 1 292 -18 518 184 48 0 chr10 8060370 8060473 -137528815 - MER114 LTR ERV -95 553 446 281 130 0 0 chr10 8060631 8060677 -137528611 - AluSc SINE Alu -119 180 135 23 54 0 0 chr10 8061192 8061229 -137528059 + AT_rich Low_complexity Low_complexity 1 37 0 262 224 52 43 chr10 8061292 8061408 -137527880 - MER113 DNA MER1_type? -404 117 1 181 377 35 13 chr10 8061563 8061791 -137527497 - L2 LINE L2 -556 2758 2526 551 301 31 35 chr10 8061975 8062231 -137527057 - MER102b DNA MER1_type -3 338 84 224 267 93 13 chr10 8062237 8062312 -137526976 + MIR SINE MIR 159 239 -23 695 161 65 30 chr10 8062622 8062790 -137526498 - MER5A DNA MER1_type 0 189 16 631 258 60 0 chr10 8062932 8063099 -137526189 + MER5A DNA MER1_type 13 189 0 1254 218 107 3 chr10 8063653 8063951 -137525337 + MER2 DNA MER2_type 6 334 -11 2315 117 0 0 chr10 8064167 8064476 -137524812 - AluSx SINE Alu -3 309 1 344 290 15 70 chr10 8065403 8065603 -137523685 + Charlie8 DNA MER1_type 1 189 -2228 719 190 0 0 chr10 8066079 8066195 -137523093 - FLAM_C SINE Alu -17 116 1 1166 253 30 22 chr10 8066697 8067060 -137522228 - MLT1B LTR MaLR -7 383 18 984 247 74 54 chr10 8067487 8068068 -137521220 + L1MC5 LINE L1 7261 7774 -187 325 336 160 15 chr10 8068090 8068358 -137520930 + L2 LINE L2 2988 3294 -19 2524 71 0 0 chr10 8068728 8069036 -137520252 - AluSx SINE Alu -4 308 1 1822 226 95 74 chr10 8069036 8069605 -137519683 - L1MC5 LINE L1 -435 7526 6934 2282 93 0 0 chr10 8069605 8069896 -137519392 - AluSg SINE Alu -19 291 1 1822 226 95 74 chr10 8069896 8070126 -137519162 - L1MC5 LINE L1 -1027 6934 6710 36 0 0 0 chr10 8070132 8070168 -137519120 + AT_rich Low_complexity Low_complexity 1 36 0 2279 179 13 30 chr10 8070178 8070652 -137518636 - L1MA7 LINE L1 -26 6265 5800 998 134 5 80 chr10 8070656 8070788 -137518500 - L1MA3 LINE L1 0 6305 6191 2017 137 6 19 chr10 8070788 8071102 -137518186 - AluSx SINE Alu -2 310 1 998 134 5 80 chr10 8071102 8071170 -137518118 - L1MA3 LINE L1 -114 6191 6120 504 188 0 0 chr10 8071170 8071250 -137518038 + AluJ/FLAM SINE Alu 5 84 -228 393 162 0 0 chr10 8071250 8071318 -137517970 - L1MA3 LINE L1 -175 6130 6063 * 2889 143 54 6 chr10 8071298 8071813 -137517475 - L1MA7 LINE L1 -475 5816 5293 240 77 0 0 chr10 8072251 8072290 -137516998 - L1MA7 LINE L1 -991 5300 5262 * 1833 191 32 8 chr10 8072286 8072688 -137516600 - L1 LINE L1 -816 5330 4919 278 198 0 62 chr10 8072693 8072774 -137516514 - L1MC5 LINE L1 -1237 6724 6649 1634 108 18 0 chr10 8073370 8073592 -137515696 + MER30 DNA MER1_type 5 230 0 209 308 219 31 chr10 8074182 8074530 -137514758 + L2 LINE L2 1932 2213 -1101 2171 95 57 0 chr10 8074530 8074826 -137514462 - AluSp SINE Alu 0 313 1 209 308 219 31 chr10 8074826 8075051 -137514237 + L2 LINE L2 2213 2613 -701 1406 157 25 98 chr10 8075198 8075333 -137513955 + AluJb SINE Alu 1 144 -168 1964 127 0 0 chr10 8075333 8075601 -137513687 + AluSq SINE Alu 1 268 -45 1406 157 25 98 chr10 8075601 8075613 -137513675 + AluJb SINE Alu 144 155 -157 2135 139 0 0 chr10 8075613 8075915 -137513373 + AluSx SINE Alu 1 302 -10 1406 157 25 98 chr10 8075915 8076084 -137513204 + AluJb SINE Alu 155 295 -17 285 341 67 39 chr10 8076259 8076438 -137512850 - MIR SINE MIR -56 206 23 2174 128 0 7 chr10 8076607 8076934 -137512354 - AluSx SINE Alu 0 312 1 203 79 26 0 chr10 8077162 8077200 -137512088 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 214 273 0 80 chr10 8077743 8077831 -137511457 - MIR SINE MIR -157 105 25 2395 71 0 0 chr10 8078410 8078704 -137510584 - AluY SINE Alu -17 294 1 2470 80 0 3 chr10 8079089 8079403 -137509885 - AluSq SINE Alu 0 313 1 271 336 31 8 chr10 8079516 8079644 -137509644 - L2 LINE L2 -1 3271 3141 25 0 0 0 chr10 8080121 8080146 -137509142 + AT_rich Low_complexity Low_complexity 1 25 0 1638 190 48 0 chr10 8080417 8080712 -137508576 - AluJb SINE Alu -3 309 1 202 232 126 21 chr10 8080966 8081061 -137508227 + MIR SINE MIR 99 203 -59 1675 162 36 4 chr10 8081383 8081661 -137507627 - AluJo SINE Alu -25 287 1 2413 87 0 3 chr10 8082619 8082928 -137506360 - AluSc SINE Alu -1 308 1 633 265 94 32 chr10 8083059 8083452 -137505836 - L1ME LINE L1 -326 5836 5450 2393 69 7 0 chr10 8084205 8084508 -137504780 - AluY SINE Alu -6 305 1 3390 168 73 80 chr10 8084721 8085687 -137503601 + Looper DNA T2_type 1 960 -598 1772 179 3 3 chr10 8085707 8085998 -137503290 - AluJo SINE Alu -19 293 3 716 172 61 37 chr10 8085998 8086021 -137503267 + Looper DNA T2_type 1392 1413 -145 2021 122 3 16 chr10 8086021 8086324 -137502964 - AluSx SINE Alu -13 299 1 716 172 61 37 chr10 8086324 8086463 -137502825 + Looper DNA T2_type 1413 1558 0 671 251 96 35 chr10 8087326 8087525 -137501763 - MIR SINE MIR -21 241 31 1959 148 0 10 chr10 8087917 8088222 -137501066 - AluJb SINE Alu -10 302 1 2154 126 3 0 chr10 8088634 8088928 -137500360 + AluSx SINE Alu 1 295 -17 213 175 0 0 chr10 8088928 8088968 -137500320 + (TA)n Simple_repeat Simple_repeat 1 40 0 1249 263 51 47 chr10 8089151 8089737 -137499551 - L2 LINE L2 0 3313 2736 654 265 44 22 chr10 8089750 8090022 -137499266 - L1MC5 LINE L1 -31 7930 7653 1522 202 20 17 chr10 8090024 8090326 -137498962 - AluJo SINE Alu -9 303 1 917 153 0 0 chr10 8090345 8090482 -137498806 - FRAM SINE Alu -30 146 10 2162 200 50 79 chr10 8090490 8091290 -137497998 - L1MC5 LINE L1 -305 7656 6880 3152 213 91 61 chr10 8091299 8092328 -137496960 - MER63D DNA MER1_type 0 1061 2 2220 240 112 105 chr10 8093160 8094044 -137495244 + HAL1 LINE L1 1 877 -1630 842 135 0 15 chr10 8094044 8094177 -137495111 + FLAM_C SINE Alu 3 133 0 2220 240 112 105 chr10 8094177 8094445 -137494843 + HAL1 LINE L1 877 1165 -1342 2159 65 41 27 chr10 8094445 8094739 -137494549 + AluSx SINE Alu 1 298 -14 2220 240 112 105 chr10 8094739 8094817 -137494471 + HAL1 LINE L1 1165 1241 -1266 883 228 31 9 chr10 8094822 8095050 -137494238 + L1MC5 LINE L1 6644 6876 -1085 2010 235 37 8 chr10 8095064 8095549 -137493739 + MER63C DNA MER1_type 1 499 -431 220 282 0 39 chr10 8096905 8096983 -137492305 + MIR SINE MIR 180 254 -8 250 284 0 0 chr10 8097047 8097136 -137492152 + (TG)n Simple_repeat Simple_repeat 1 89 0 270 299 39 0 chr10 8097150 8097227 -137492061 + L2 LINE L2 2990 3069 -244 2352 58 4 0 chr10 8097227 8097501 -137491787 + AluY SINE Alu 7 281 -30 523 0 0 0 chr10 8097501 8097559 -137491729 + (TAAA)n Simple_repeat Simple_repeat 3 140 0 504 263 72 13 chr10 8097940 8098092 -137491196 + L2 LINE L2 3150 3310 -3 1997 151 0 16 chr10 8098229 8098546 -137490742 + AluJb SINE Alu 1 312 0 676 235 31 131 chr10 8098768 8099029 -137490259 - L1MC5 LINE L1 -852 7109 6902 2246 109 0 40 chr10 8099029 8099206 -137490082 - AluSg1 SINE Alu -1 308 148 2197 88 3 10 chr10 8099206 8099503 -137489785 - AluY SINE Alu -16 295 1 2246 109 0 40 chr10 8099503 8099646 -137489642 - AluSg1 SINE Alu -161 148 1 676 235 31 131 chr10 8099646 8099797 -137489491 - L1MC5 LINE L1 -1059 6902 6738 1082 258 79 21 chr10 8099809 8100698 -137488590 - L1ME LINE L1 -4649 1431 464 1602 200 70 55 chr10 8100758 8101283 -137488005 - L1ME1 LINE L1 -8 6158 5626 608 200 39 15 chr10 8101284 8101414 -137487874 + LTR40b LTR ERVL 330 462 0 554 242 25 12 chr10 8101414 8101569 -137487719 - L1ME1 LINE L1 -1473 4673 4516 2019 137 7 3 chr10 8101569 8101868 -137487420 + AluSx SINE Alu 1 300 -12 361 219 0 62 chr10 8101873 8101969 -137487319 - L1MC4 LINE L1 -1339 6703 6614 213 121 0 0 chr10 8101969 8102002 -137487286 + (TA)n Simple_repeat Simple_repeat 1 33 0 333 235 59 0 chr10 8102005 8102141 -137487147 - L1ME1 LINE L1 -1625 4521 4378 1892 183 28 5 chr10 8102161 8102549 -137486739 - L1MC1 LINE L1 -6 6327 5931 775 218 55 27 chr10 8102550 8102807 -137486481 - L1MA8 LINE L1 -8 6283 6020 400 217 0 0 chr10 8102805 8102888 -137486400 - L1MC1 LINE L1 -483 5695 5613 * 993 225 17 20 chr10 8102885 8103183 -137486105 - L1MC1 LINE L1 -834 5312 5016 2215 58 0 41 chr10 8103426 8103756 -137485532 + AluY SINE Alu 1 318 0 703 315 142 10 chr10 8104449 8104930 -137484358 - L2 LINE L2 -30 3283 2733 2059 128 6 10 chr10 8105217 8105530 -137483758 + AluSx SINE Alu 1 312 0 2604 135 31 2 chr10 8105993 8106414 -137482874 - Tigger2a DNA MER2_type -1 433 1 613 319 16 20 chr10 8106761 8107009 -137482279 + MIR SINE MIR 2 248 -14 468 296 63 6 chr10 8107061 8107220 -137482068 - MIR SINE MIR -92 170 3 23 0 0 0 chr10 8107347 8107370 -137481918 + AT_rich Low_complexity Low_complexity 1 23 0 219 36 0 0 chr10 8107487 8107515 -137481773 + (TG)n Simple_repeat Simple_repeat 2 29 0 420 306 132 3 chr10 8107699 8108010 -137481278 - L1ME LINE L1 -452 5669 5319 2446 97 0 0 chr10 8109526 8109834 -137479454 - AluSp SINE Alu -5 308 1 210 71 0 0 chr10 8110304 8110332 -137478956 + (T)n Simple_repeat Simple_repeat 1 28 0 28 48 0 0 chr10 8111170 8111212 -137478076 + AT_rich Low_complexity Low_complexity 1 42 0 28 0 0 0 chr10 8112735 8112763 -137476525 + AT_rich Low_complexity Low_complexity 1 28 0 34 89 0 0 chr10 8114048 8114138 -137475150 + AT_rich Low_complexity Low_complexity 1 90 0 440 319 77 6 chr10 8115737 8115906 -137473382 - MIR3 SINE MIR -7 201 21 472 214 10 0 chr10 8116250 8116353 -137472935 - MER69 DNA AcHobo 0 2526 2423 305 250 147 38 chr10 8116492 8116676 -137472612 + L1ME3A LINE L1 5956 6159 -11 450 0 0 0 chr10 8116784 8116834 -137472454 + (TATG)n Simple_repeat Simple_repeat 2 51 0 1903 160 4 0 chr10 8116835 8117116 -137472172 - AluSx SINE Alu -29 283 2 21 0 0 0 chr10 8117187 8117208 -137472080 + AT_rich Low_complexity Low_complexity 1 21 0 1551 166 6 94 chr10 8118016 8118347 -137470941 + AluJo SINE Alu 1 302 -10 2089 134 0 13 chr10 8119045 8119352 -137469936 + AluJb SINE Alu 3 305 -7 324 48 0 0 chr10 8119562 8119604 -137469684 + (CA)n Simple_repeat Simple_repeat 2 43 0 318 287 47 53 chr10 8119804 8119954 -137469334 + MIR3 SINE MIR 1 149 -59 278 200 0 0 chr10 8120450 8120500 -137468788 - MIR3 SINE MIR -34 174 125 417 255 83 88 chr10 8120643 8120835 -137468453 + L3 LINE CR1 1308 1498 -79 4960 224 73 27 chr10 8120875 8121864 -137467424 - L1MC4 LINE L1 0 8042 7100 2110 128 86 37 chr10 8121864 8122270 -137467018 - MSTC LTR MaLR -2 426 1 4960 224 73 27 chr10 8122270 8122482 -137466806 - L1MC4 LINE L1 -942 7100 6899 2283 92 0 3 chr10 8122482 8122777 -137466511 - AluSq SINE Alu -19 294 1 4960 224 73 27 chr10 8122777 8123149 -137466139 - L1MC4 LINE L1 -1143 6899 6546 882 159 11 21 chr10 8123149 8123338 -137465950 + L1MB4 LINE L1 5980 6166 -14 285 51 0 0 chr10 8123339 8123378 -137465910 + (CA)n Simple_repeat Simple_repeat 2 40 0 4960 224 73 27 chr10 8123378 8123682 -137465606 - L1MC4 LINE L1 -1495 6547 5984 1741 143 23 33 chr10 8124017 8124318 -137464970 - AluJb SINE Alu -14 298 1 393 286 129 18 chr10 8124596 8124767 -137464521 + MIR SINE MIR 47 236 -26 2293 92 10 0 chr10 8125043 8125346 -137463942 + AluY SINE Alu 1 306 -5 206 158 0 26 chr10 8125556 8125594 -137463694 + T-rich Low_complexity Low_complexity 1 37 0 908 280 70 45 chr10 8126417 8127043 -137462245 + Charlie7 DNA MER1_type 44 685 -1927 1003 253 37 0 chr10 8127407 8127648 -137461640 - MIR SINE MIR 0 262 13 371 315 178 35 chr10 8127683 8128421 -137460867 + L2 LINE L2 2246 3078 -194 222 220 0 0 chr10 8130447 8130506 -137458782 + A-rich Low_complexity Low_complexity 1 59 0 237 65 0 0 chr10 8130915 8130946 -137458342 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 2469 54 3 13 chr10 8132021 8132334 -137456954 + AluY SINE Alu 1 310 -1 2173 109 0 3 chr10 8132962 8133256 -137456032 + AluSx SINE Alu 9 301 -11 296 279 30 79 chr10 8135572 8135737 -137453551 - MIR SINE MIR -46 216 60 2498 66 0 0 chr10 8137349 8137651 -137451637 + AluSg SINE Alu 1 302 -8 2103 126 10 3 chr10 8137682 8137983 -137451305 + AluSx SINE Alu 1 303 -9 23 54 0 0 chr10 8138608 8138645 -137450643 + AT_rich Low_complexity Low_complexity 1 37 0 512 321 101 42 chr10 8139012 8139625 -137449663 - L2 LINE L2 -1 3312 2668 977 296 302 24 chr10 8139729 8141252 -137448036 - L2 LINE L2 -1296 2018 72 994 154 56 2 chr10 8141536 8141823 -137447465 + MER2 DNA MER2_type 1 345 0 1469 171 7 36 chr10 8141950 8142225 -137447063 + AluJo SINE Alu 1 267 -45 42 0 0 0 chr10 8142239 8142281 -137447007 + AT_rich Low_complexity Low_complexity 1 42 0 429 20 0 0 chr10 8142286 8142336 -137446952 + (TG)n Simple_repeat Simple_repeat 2 51 0 540 234 170 23 chr10 8143440 8143658 -137445630 - MER112 DNA MER1_type -3 257 8 26 0 0 0 chr10 8145224 8145250 -137444038 + AT_rich Low_complexity Low_complexity 1 26 0 183 42 0 0 chr10 8145572 8145596 -137443692 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 21 0 0 0 chr10 8147005 8147026 -137442262 + AT_rich Low_complexity Low_complexity 1 21 0 2199 108 23 3 chr10 8147508 8147814 -137441474 + AluSq SINE Alu 1 312 -1 664 106 0 58 chr10 8147918 8148022 -137441266 + AluJ/FLAM SINE Alu 1 98 -214 406 236 87 24 chr10 8150185 8150312 -137438976 + L2 LINE L2 3173 3307 -6 1323 171 148 4 chr10 8151386 8151650 -137437638 - AluJb SINE Alu 0 302 1 1539 191 24 3 chr10 8151906 8152200 -137437088 + AluJb SINE Alu 1 300 -12 27 49 0 0 chr10 8152810 8152851 -137436437 + AT_rich Low_complexity Low_complexity 1 41 0 466 269 99 60 chr10 8153149 8153350 -137435938 - MIR SINE MIR -51 211 3 207 211 19 0 chr10 8154430 8154482 -137434806 + GA-rich Low_complexity Low_complexity 2 54 0 1852 177 0 7 chr10 8154656 8154966 -137434322 - AluJb SINE Alu -4 308 1 405 226 169 16 chr10 8155837 8155961 -137433327 + HsTC2 DNA Tc2 2 144 -1754 * 1198 229 108 20 chr10 8155959 8156366 -137432922 + HsTC2 DNA Tc2 1282 1900 0 1687 157 0 41 chr10 8156423 8156743 -137432545 - AluSx SINE Alu 0 308 1 780 304 170 23 chr10 8157032 8157195 -137432093 - L2 LINE L2 0 3313 3175 2024 125 7 0 chr10 8157195 8157514 -137431774 + AluSx SINE Alu 1 321 0 2203 63 45 0 chr10 8157516 8157803 -137431485 + AluY SINE Alu 1 300 -11 780 304 170 23 chr10 8157803 8158292 -137430996 - L2 LINE L2 -138 3175 2553 5833 148 16 16 chr10 8158709 8159848 -137429440 - L1MC1 LINE L1 0 6333 5196 568 304 44 5 chr10 8159937 8160141 -137429147 - MIR SINE MIR -8 254 43 529 351 67 33 chr10 8160510 8161029 -137428259 - L2 LINE L2 -650 2664 2128 289 277 225 8 chr10 8161073 8161322 -137427966 + HAL1 LINE L1 16 318 -2189 1416 276 161 21 chr10 8161526 8161778 -137427510 + HAL1 LINE L1 640 855 -1652 396 0 0 0 chr10 8161778 8161822 -137427466 + (CA)n Simple_repeat Simple_repeat 2 45 0 1416 276 161 21 chr10 8161822 8162504 -137426784 + HAL1 LINE L1 855 1705 -802 180 242 0 0 chr10 8162639 8162672 -137426616 - L2 LINE L2 -86 3186 3154 2080 142 9 22 chr10 8162873 8163189 -137426099 + AluJo SINE Alu 1 312 0 198 250 0 0 chr10 8163475 8163519 -137425769 + L2 LINE L2 3265 3308 -5 247 301 16 75 chr10 8164940 8165126 -137424162 - Charlie8 DNA MER1_type -2230 187 13 216 315 71 54 chr10 8165148 8165332 -137423956 + L2 LINE L2 2542 2728 -586 387 0 0 0 chr10 8166294 8166337 -137422951 + (TG)n Simple_repeat Simple_repeat 2 44 0 433 315 164 25 chr10 8167787 8168190 -137421098 + L2 LINE L2 2855 3313 0 236 312 239 4 chr10 8168301 8168548 -137420740 + L2 LINE L2 2670 2974 -340 1826 181 3 3 chr10 8168642 8168946 -137420342 + AluJb SINE Alu 1 304 -8 798 154 0 0 chr10 8169132 8169262 -137420026 - FLAM_C SINE Alu -3 130 1 181 331 94 24 chr10 8169318 8169445 -137419843 + L2 LINE L2 2034 2169 -1145 555 305 159 11 chr10 8169527 8170024 -137419264 - L2 LINE L2 -25 3288 2713 1601 166 3 86 chr10 8170266 8170591 -137418697 - AluJo SINE Alu -14 298 1 341 168 25 134 chr10 8171833 8171952 -137417336 - HsTC2a DNA Tc2 -4 738 633 597 271 33 11 chr10 8171987 8172168 -137417120 - HsTC2a DNA Tc2 -515 229 45 220 363 25 55 chr10 8172405 8172606 -137416682 - L2 LINE L2 -251 3062 2868 2342 193 55 4 chr10 8172868 8173391 -137415897 - MER82 DNA MER2_type -94 559 10 582 224 104 37 chr10 8173429 8173893 -137415395 - MLT1H LTR MaLR -16 533 12 180 250 120 30 chr10 8173967 8174067 -137415221 - MIR SINE MIR -89 173 65 236 280 101 0 chr10 8175670 8175791 -137413497 - MIR3 SINE MIR -65 143 10 413 211 72 53 chr10 8178191 8178399 -137410889 + L1MC4 LINE L1 7831 8042 0 26 0 0 27 chr10 8178399 8178410 -137410878 + AT_rich Low_complexity Low_complexity 1 11 -25 2168 109 3 0 chr10 8178410 8178695 -137410593 + AluSg SINE Alu 1 286 -24 26 0 0 27 chr10 8178695 8178720 -137410568 + AT_rich Low_complexity Low_complexity 11 36 0 21 36 0 0 chr10 8179822 8179850 -137409438 + AT_rich Low_complexity Low_complexity 1 28 0 297 0 0 0 chr10 8179997 8180030 -137409258 + (TC)n Simple_repeat Simple_repeat 1 33 0 21 0 0 0 chr10 8180099 8180120 -137409168 + AT_rich Low_complexity Low_complexity 1 21 0 39 38 0 0 chr10 8180505 8180558 -137408730 + AT_rich Low_complexity Low_complexity 1 53 0 483 229 62 3 chr10 8180599 8180749 -137408539 + L1ME3A LINE L1 5790 5946 -224 2238 82 0 20 chr10 8181055 8181341 -137407947 + AluY SINE Alu 1 282 -29 216 0 0 0 chr10 8181341 8181365 -137407923 + (CA)n Simple_repeat Simple_repeat 1 24 0 193 122 0 61 chr10 8181689 8181738 -137407550 + (CAAAAA)n Simple_repeat Simple_repeat 2 47 0 358 107 0 18 chr10 8182557 8182613 -137406675 - MER58 DNA MER1_type 0 2420 2366 333 356 109 24 chr10 8182631 8182878 -137406410 - L2 LINE L2 -172 3100 2833 2032 162 0 3 chr10 8184043 8184351 -137404937 - AluJb SINE Alu -5 307 1 190 218 73 0 chr10 8185173 8185228 -137404060 - MIR SINE MIR -60 148 90 1828 91 0 8 chr10 8185768 8186022 -137403266 + L1PA6 LINE L1 5903 6154 0 243 265 0 0 chr10 8187309 8187411 -137401877 + GA-rich Low_complexity Low_complexity 4 105 0 187 197 0 28 chr10 8187559 8187630 -137401658 + GA-rich Low_complexity Low_complexity 2 70 0 542 159 28 28 chr10 8187782 8187927 -137401361 + GA-rich Low_complexity Low_complexity 6 150 0 22 35 0 0 chr10 8189148 8189177 -137400111 + AT_rich Low_complexity Low_complexity 1 29 0 321 208 62 92 chr10 8189224 8189354 -137399934 - MIR SINE MIR -70 192 67 195 232 116 29 chr10 8189875 8189944 -137399344 + MIR SINE MIR 176 250 -12 807 244 87 30 chr10 8190778 8191008 -137398280 - MIR SINE MIR -19 243 1 1113 190 194 12 chr10 8191228 8191340 -137397948 + AluJo SINE Alu 1 91 -211 279 0 0 0 chr10 8191340 8191371 -137397917 + (CAAA)n Simple_repeat Simple_repeat 2 32 0 1113 190 194 12 chr10 8191371 8191505 -137397783 + AluJo SINE Alu 91 292 -10 22 35 0 0 chr10 8191636 8191665 -137397623 + AT_rich Low_complexity Low_complexity 1 29 0 272 199 15 31 chr10 8191988 8192063 -137397225 + MIR SINE MIR 12 85 -123 315 271 216 5 chr10 8192496 8192695 -137396593 - MIR SINE MIR -8 254 14 267 296 12 0 chr10 8192800 8192881 -137396407 - MIR3 SINE MIR -2 206 125 311 228 152 0 chr10 8194638 8194730 -137394558 - MER94 DNA DNA -10 124 19 325 292 199 18 chr10 8195197 8195416 -137393872 + MIR SINE MIR 7 262 0 233 170 21 21 chr10 8195863 8195910 -137393378 + L2 LINE L2 3214 3260 -12 2030 124 0 0 chr10 8196048 8196330 -137392958 + AluSg SINE Alu 1 282 -28 432 37 0 0 chr10 8196330 8196384 -137392904 + (CA)n Simple_repeat Simple_repeat 2 55 0 2345 87 7 0 chr10 8196992 8197291 -137391997 + AluSc SINE Alu 1 301 -8 245 316 38 0 chr10 8197573 8197652 -137391636 - L2 LINE L2 -24 3289 3208 204 309 15 15 chr10 8197815 8197883 -137391405 - L2 LINE L2 -8 3264 3197 236 277 0 0 chr10 8198118 8198183 -137391105 + MER20 DNA MER1_type 132 196 -23 1308 128 0 15 chr10 8198433 8198612 -137390676 - AluSg/x SINE Alu 0 312 135 2089 94 45 3 chr10 8198612 8198900 -137390388 - AluY SINE Alu -11 300 1 1308 128 0 15 chr10 8198900 8198915 -137390373 - AluSg/x SINE Alu -177 135 121 236 280 101 0 chr10 8201433 8201554 -137387734 + MIR3 SINE MIR 10 148 -65 180 250 120 30 chr10 8203157 8203257 -137386031 + MIR SINE MIR 65 173 -89 582 224 104 37 chr10 8203331 8203795 -137385493 + MLT1H LTR MaLR 12 533 -16 2342 193 55 4 chr10 8203833 8204356 -137384932 + MER82 DNA MER2_type 10 559 -94 220 363 25 55 chr10 8204618 8204819 -137384469 + L2 LINE L2 2868 3062 -251 597 271 33 11 chr10 8205056 8205237 -137384051 + HsTC2b DNA Tc2 45 229 -686 341 168 25 134 chr10 8205272 8205391 -137383897 + HsTC2b DNA Tc2 809 914 -4 1598 167 3 84 chr10 8206632 8206955 -137382333 + AluJo SINE Alu 1 297 -15 555 305 159 11 chr10 8207197 8207694 -137381594 + L2 LINE L2 2713 3288 -25 181 331 94 24 chr10 8207776 8207903 -137381385 - L2 LINE L2 -1145 2169 2034 798 154 0 0 chr10 8207959 8208089 -137381199 + FLAM_C SINE Alu 1 130 -3 1813 184 3 3 chr10 8208275 8208579 -137380709 - AluJb SINE Alu -8 304 1 236 312 239 4 chr10 8208673 8208920 -137380368 - L2 LINE L2 -340 2974 2670 433 315 164 25 chr10 8209031 8209434 -137379854 - L2 LINE L2 0 3313 2855 387 0 0 0 chr10 8210884 8210927 -137378361 + (CA)n Simple_repeat Simple_repeat 2 44 0 216 315 71 54 chr10 8211889 8212073 -137377215 - L2 LINE L2 -586 2728 2542 247 301 16 75 chr10 8212095 8212281 -137377007 + Charlie8 DNA MER1_type 13 187 -2230 1256 116 72 0 chr10 8212476 8212657 -137376631 + AluSg/x SINE Alu 112 305 -7 231 228 0 0 chr10 8212728 8212785 -137376503 + L1ME3A LINE L1 6103 6159 -11 2154 131 0 0 chr10 8213025 8213323 -137375965 + AluSx SINE Alu 1 298 -14 228 67 0 0 chr10 8213324 8213354 -137375934 + (TTTC)n Simple_repeat Simple_repeat 2 31 0 197 292 0 97 chr10 8213444 8213516 -137375772 + L2 LINE L2 3127 3191 -81 2315 91 30 0 chr10 8213914 8214212 -137375076 - AluSx SINE Alu -1 311 5 375 23 0 0 chr10 8214496 8214540 -137374748 + (TA)n Simple_repeat Simple_repeat 1 44 0 1567 166 30 51 chr10 8215788 8216084 -137373204 + AluJo SINE Alu 1 290 -22 559 265 256 2 chr10 8216304 8216713 -137372575 + MLT1F1 LTR MaLR 40 567 0 385 339 91 61 chr10 8217352 8217780 -137371508 + L1MC4a LINE L1 6051 6491 -1317 2300 82 13 38 chr10 8217782 8218099 -137371189 - AluSc SINE Alu 0 309 1 846 102 8 8 chr10 8218134 8218252 -137371036 + FLAM_C SINE Alu 1 118 -15 1002 256 31 55 chr10 8218284 8218667 -137370621 + L1MC4a LINE L1 6548 6921 -887 253 272 0 16 chr10 8218667 8218792 -137370496 + GA-rich Low_complexity Low_complexity 2 124 0 400 259 121 91 chr10 8218889 8219305 -137369983 + L1MC5 LINE L1 7026 7475 -486 1990 139 0 0 chr10 8219305 8219578 -137369710 + AluJo SINE Alu 1 273 -39 400 259 121 91 chr10 8219578 8219890 -137369398 + L1MC5 LINE L1 7475 7776 -185 233 323 0 23 chr10 8221068 8221201 -137368087 + (TA)n Simple_repeat Simple_repeat 2 131 0 24 53 0 0 chr10 8221461 8221499 -137367789 + AT_rich Low_complexity Low_complexity 1 38 0 257 138 0 35 chr10 8221571 8221629 -137367659 + (TATG)n Simple_repeat Simple_repeat 3 58 0 523 275 53 6 chr10 8223482 8223653 -137365635 + MLT1K LTR MaLR 84 262 -326 30 0 0 0 chr10 8223954 8223984 -137365304 + AT_rich Low_complexity Low_complexity 1 30 0 1611 174 50 30 chr10 8224013 8224182 -137365106 - AluJo SINE Alu -8 304 125 2040 129 61 3 chr10 8224182 8224476 -137364812 - AluSx SINE Alu -1 311 1 1611 174 50 30 chr10 8224476 8224604 -137364684 - AluJo SINE Alu -187 125 1 363 246 27 27 chr10 8225118 8225228 -137364060 + L1ME LINE L1 5520 5629 -492 252 283 53 33 chr10 8225235 8225387 -137363901 + L1ME LINE L1 5672 5826 -295 1899 165 20 3 chr10 8225447 8225744 -137363544 - AluJb SINE Alu -10 302 1 2249 112 0 0 chr10 8226700 8227003 -137362285 + AluSx SINE Alu 1 303 -9 1005 164 0 0 chr10 8228912 8229092 -137360196 - AluJb SINE Alu 0 315 136 299 161 36 0 chr10 8229764 8229820 -137359468 + MLT1K LTR MaLR 531 588 0 2055 140 0 16 chr10 8230084 8230399 -137358889 + AluSx SINE Alu 1 310 -2 23 86 0 0 chr10 8230728 8230786 -137358502 + AT_rich Low_complexity Low_complexity 1 58 0 642 174 90 7 chr10 8232780 8232935 -137356353 - MER58 DNA MER1_type -2252 168 1 2461 83 0 6 chr10 8233406 8233719 -137355569 - AluY SINE Alu 0 311 1 1033 146 6 6 chr10 8233722 8233887 -137355401 - FRAM SINE Alu -12 164 1 1291 133 0 15 chr10 8236064 8236079 -137353209 + AluSg/x SINE Alu 121 135 -177 2064 97 45 3 chr10 8236079 8236367 -137352921 + AluY SINE Alu 1 300 -11 1291 133 0 15 chr10 8236367 8236546 -137352742 + AluSg/x SINE Alu 135 312 0 236 277 0 0 chr10 8236796 8236861 -137352427 - MER20 DNA MER1_type -23 196 132 204 309 15 15 chr10 8237096 8237164 -137352124 + L2 LINE L2 3197 3264 -8 245 316 38 0 chr10 8237327 8237406 -137351882 + L2 LINE L2 3208 3289 -24 2326 90 10 0 chr10 8237688 8237989 -137351299 - AluSx SINE Alu -8 304 1 1142 227 126 43 chr10 8237989 8238543 -137350745 - L1MC5 LINE L1 -435 7526 6927 1916 102 0 0 chr10 8238558 8238802 -137350486 - AluSx SINE Alu -19 293 50 1530 172 0 44 chr10 8239500 8239796 -137349492 + AluJb SINE Alu 23 305 -7 25 0 0 0 chr10 8240066 8240091 -137349197 + AT_rich Low_complexity Low_complexity 1 25 0 315 238 50 0 chr10 8240134 8240235 -137349053 - L1ME LINE L1 -441 5663 5558 309 345 74 5 chr10 8240502 8240705 -137348583 - L1ME LINE L1 -913 5216 5000 686 273 97 20 chr10 8241635 8242038 -137347250 - L1ME LINE L1 -3453 2676 2243 374 259 126 42 chr10 8242047 8242309 -137346979 - L1ME LINE L1 -4049 2261 1978 1450 199 7 0 chr10 8242405 8242712 -137346576 + Charlie1 DNA MER1_type 2057 2365 -396 971 123 52 110 chr10 8242716 8242759 -137346529 + Charlie1 DNA MER1_type 2472 2516 -245 771 175 0 0 chr10 8242759 8242885 -137346403 + FLAM_A SINE Alu 1 126 -7 971 123 52 110 chr10 8242885 8243035 -137346253 + Charlie1 DNA MER1_type 2516 2643 -118 1977 147 13 3 chr10 8243035 8243342 -137345946 - AluSx SINE Alu -2 310 1 971 123 52 110 chr10 8243342 8243455 -137345833 + Charlie1 DNA MER1_type 2643 2761 0 685 292 69 21 chr10 8243479 8243941 -137345347 - L1MEd LINE L1 -4706 1604 1082 242 255 0 31 chr10 8243986 8244084 -137345204 - L1MEd LINE L1 -5150 982 888 399 293 87 45 chr10 8244146 8244388 -137344900 - L1MEd LINE L1 -5264 855 604 744 273 32 67 chr10 8244854 8245042 -137344246 + MIR SINE MIR 1 179 -83 2235 108 0 7 chr10 8245042 8245174 -137344114 + AluSp SINE Alu 1 132 -181 405 0 0 0 chr10 8245174 8245219 -137344069 + (CA)n Simple_repeat Simple_repeat 2 46 0 2235 108 0 7 chr10 8245219 8245383 -137343905 + AluSp SINE Alu 132 295 -18 744 273 32 67 chr10 8245383 8245447 -137343841 + MIR SINE MIR 179 244 -18 246 338 27 0 chr10 8245422 8245496 -137343792 + L2 LINE L2 3186 3261 -11 * 397 326 39 26 chr10 8246139 8246388 -137342900 + L1ME3A LINE L1 5750 5952 -218 432 0 0 0 chr10 8246557 8246605 -137342683 + (TA)n Simple_repeat Simple_repeat 1 48 0 441 316 124 5 chr10 8246628 8246846 -137342442 + MIR SINE MIR 18 261 -1 214 290 75 21 chr10 8246849 8246942 -137342346 - MIR SINE MIR -152 110 13 2337 98 0 7 chr10 8247087 8247393 -137341895 - AluSx SINE Alu -8 304 1 301 279 91 13 chr10 8247556 8247710 -137341578 - MLT1I LTR MaLR -14 395 230 314 301 78 50 chr10 8248086 8248305 -137340983 + L1M2 LINE L1 734 958 -5891 864 166 7 7 chr10 8248448 8248599 -137340689 - FRAM SINE Alu -25 151 1 2335 91 10 3 chr10 8248607 8248914 -137340374 - AluSq SINE Alu -4 309 1 1637 181 21 3 chr10 8248914 8249201 -137340087 - AluJb SINE Alu -19 293 1 2200 104 7 10 chr10 8249619 8249917 -137339371 + AluSq SINE Alu 1 297 -16 1603 158 9 70 chr10 8250238 8250570 -137338718 - AluJo SINE Alu -2 310 1 238 253 11 53 chr10 8250713 8250808 -137338480 + MIR3 SINE MIR 103 193 -15 1777 168 3 13 chr10 8250890 8251199 -137338089 + AluJb SINE Alu 1 306 -6 223 315 157 22 chr10 8251289 8251423 -137337865 + MIR SINE MIR 64 214 -48 23 68 0 0 chr10 8254514 8254558 -137334730 + AT_rich Low_complexity Low_complexity 1 44 0 180 298 107 12 chr10 8254589 8254673 -137334615 - L3 LINE CR1 -902 675 584 21 36 0 0 chr10 8255075 8255103 -137334185 + AT_rich Low_complexity Low_complexity 1 28 0 366 170 0 0 chr10 8258281 8258357 -137330931 - AluJb SINE Alu 0 305 230 853 172 86 6 chr10 8258359 8258533 -137330755 - AluJb SINE Alu -124 188 1 1950 119 3 17 chr10 8258543 8258845 -137330443 - AluSx SINE Alu -14 298 1 2421 55 6 6 chr10 8258989 8259300 -137329988 - AluY SINE Alu 0 311 1 201 326 47 23 chr10 8259307 8259393 -137329895 - L2 LINE L2 0 3272 3185 2313 91 0 0 chr10 8259597 8259894 -137329394 + AluSq SINE Alu 1 297 -16 1579 158 21 32 chr10 8260201 8260508 -137328780 + AluJo SINE Alu 1 304 0 2105 109 17 3 chr10 8260509 8260811 -137328477 + AluSc SINE Alu 1 306 -3 951 85 23 0 chr10 8260833 8260963 -137328325 - AluSq/x SINE Alu -179 133 1 186 43 0 0 chr10 8261717 8261740 -137327548 + (TA)n Simple_repeat Simple_repeat 1 23 0 2000 104 4 4 chr10 8261742 8262020 -137327268 - AluSc SINE Alu -31 278 1 846 189 19 61 chr10 8262064 8262221 -137327067 + MER3 DNA MER1_type 5 152 -57 1552 193 0 37 chr10 8262221 8262543 -137326745 - AluJo SINE Alu -2 310 1 846 189 19 61 chr10 8262543 8262597 -137326691 + MER3 DNA MER1_type 152 207 -2 2283 81 0 28 chr10 8263279 8263631 -137325657 + AluY SINE Alu 1 343 0 1780 151 14 3 chr10 8263645 8263936 -137325352 + AluJo SINE Alu 5 298 -14 180 0 0 0 chr10 8265001 8265021 -137324267 + (TA)n Simple_repeat Simple_repeat 1 20 0 2199 102 3 7 chr10 8265022 8265326 -137323962 - AluSx SINE Alu -9 303 1 1247 122 0 0 chr10 8266446 8266626 -137322662 - AluSg/x SINE Alu -5 305 126 213 39 0 0 chr10 8266636 8266662 -137322626 + (CA)n Simple_repeat Simple_repeat 2 27 0 2154 86 0 58 chr10 8266739 8267066 -137322222 + AluY SINE Alu 1 308 -3 2331 86 0 0 chr10 8267066 8267367 -137321921 + AluSq SINE Alu 1 301 -12 425 197 0 0 chr10 8267661 8267732 -137321556 - AluS SINE Alu -241 72 2 2212 105 0 22 chr10 8267774 8267910 -137321378 + AluSx SINE Alu 1 139 -173 2211 82 0 0 chr10 8267910 8268229 -137321059 + AluSg SINE Alu 1 319 0 2212 105 0 22 chr10 8268229 8268404 -137320884 + AluSx SINE Alu 139 306 -6 1738 170 7 0 chr10 8268704 8269004 -137320284 + AluJb SINE Alu 1 302 -10 1810 168 3 0 chr10 8269770 8270061 -137319227 - AluJo SINE Alu -20 292 1 234 192 77 0 chr10 8270852 8270871 -137318417 + AluSg/x SINE Alu 115 137 -165 288 105 0 0 chr10 8270871 8270909 -137318379 + Alu SINE Alu 3 40 -260 239 150 25 0 chr10 8271074 8271114 -137318174 + Alu SINE Alu 1 41 -262 1432 150 70 42 chr10 8271240 8271526 -137317762 + AluJo SINE Alu 1 294 -18 2008 102 74 0 chr10 8271633 8271917 -137317371 + AluSp SINE Alu 1 305 -8 320 310 124 8 chr10 8275379 8275508 -137313780 - MIR3 SINE MIR -29 179 36 254 231 15 31 chr10 8276068 8276133 -137313155 + CT-rich Low_complexity Low_complexity 1 64 0 24 0 0 0 chr10 8276255 8276279 -137313009 + GC_rich Low_complexity Low_complexity 1 24 0 218 229 49 33 chr10 8277376 8277437 -137311851 + polypurine Low_complexity Low_complexity 3 64 0 204 40 0 0 chr10 8278659 8278684 -137310604 + (TA)n Simple_repeat Simple_repeat 1 25 0 351 0 0 0 chr10 8278684 8278723 -137310565 + (CA)n Simple_repeat Simple_repeat 2 40 0 387 0 0 0 chr10 8285206 8285249 -137304039 + (TG)n Simple_repeat Simple_repeat 1 43 0 221 159 0 23 chr10 8287487 8287531 -137301757 + G-rich Low_complexity Low_complexity 6 48 0 249 219 0 0 chr10 8287637 8287710 -137301578 + A-rich Low_complexity Low_complexity 1 73 0 21 36 0 0 chr10 8288537 8288565 -137300723 + GC_rich Low_complexity Low_complexity 1 28 0 22 0 0 0 chr10 8289472 8289494 -137299794 + GC_rich Low_complexity Low_complexity 1 22 0 22 35 0 0 chr10 8290056 8290085 -137299203 + GC_rich Low_complexity Low_complexity 1 29 0 24 77 0 0 chr10 8292990 8293042 -137296246 + GC_rich Low_complexity Low_complexity 1 52 0 291 164 0 0 chr10 8293322 8293383 -137295905 + GA-rich Low_complexity Low_complexity 1 61 0 216 0 0 0 chr10 8299625 8299649 -137289639 + (TC)n Simple_repeat Simple_repeat 2 25 0 23 0 0 0 chr10 8300919 8300942 -137288346 + AT_rich Low_complexity Low_complexity 1 23 0 351 150 0 0 chr10 8302827 8302887 -137286401 + (T)n Simple_repeat Simple_repeat 1 60 0 2228 97 3 0 chr10 8303807 8304115 -137285173 - AluSx SINE Alu -3 309 1 228 67 0 0 chr10 8304259 8304289 -137284999 + (T)n Simple_repeat Simple_repeat 1 30 0 222 220 0 0 chr10 8304521 8304580 -137284708 + A-rich Low_complexity Low_complexity 1 59 0 237 65 0 0 chr10 8304989 8305020 -137284268 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 2393 61 3 3 chr10 8306095 8306406 -137282882 + AluY SINE Alu 1 311 0 2068 109 0 3 chr10 8307036 8307330 -137281958 + AluSx SINE Alu 9 301 -11 300 279 30 79 chr10 8309646 8309811 -137279477 - MIR SINE MIR -46 216 60 2382 75 0 0 chr10 8311423 8311729 -137277559 + AluSg SINE Alu 1 306 -4 180 77 0 0 chr10 8312256 8312282 -137277006 + (A)n Simple_repeat Simple_repeat 1 26 0 282 143 0 0 chr10 8313055 8313104 -137276184 + (A)n Simple_repeat Simple_repeat 1 49 0 25 0 0 0 chr10 8314791 8314816 -137274472 + AT_rich Low_complexity Low_complexity 1 25 0 2255 93 0 0 chr10 8314831 8315133 -137274155 - AluSx SINE Alu -10 302 1 24 0 0 0 chr10 8315579 8315603 -137273685 + AT_rich Low_complexity Low_complexity 1 24 0 2221 109 0 3 chr10 8315815 8316127 -137273161 - AluSx SINE Alu -1 311 1 246 379 76 8 chr10 8316812 8316944 -137272344 + MIR3 SINE MIR 33 173 -35 2098 128 0 3 chr10 8317015 8317320 -137271968 - AluSx SINE Alu -8 304 1 2147 112 3 0 chr10 8317386 8317691 -137271597 + AluSx SINE Alu 1 306 -6 180 0 0 0 chr10 8317981 8318001 -137271287 + (T)n Simple_repeat Simple_repeat 1 20 0 1930 118 0 0 chr10 8318761 8319033 -137270255 + AluSx SINE Alu 11 282 -30 339 44 0 0 chr10 8319036 8319081 -137270207 + (TAAA)n Simple_repeat Simple_repeat 4 48 0 309 353 25 0 chr10 8319999 8320121 -137269167 - MIR SINE MIR -45 217 93 187 330 45 36 chr10 8320130 8320242 -137269046 + L2 LINE L2 3201 3313 0 892 221 96 12 chr10 8320624 8320864 -137268424 - MLT1D LTR MaLR -39 466 207 2457 65 0 0 chr10 8321495 8321805 -137267483 + AluY SINE Alu 1 310 -1 2154 111 10 0 chr10 8322871 8323178 -137266110 + AluSx SINE Alu 1 310 -2 1495 159 8 8 chr10 8324085 8324343 -137264945 - AluJb SINE Alu -54 258 1 2278 100 0 0 chr10 8324444 8324784 -137264504 + AluSc SINE Alu 1 340 0 504 198 159 32 chr10 8325400 8325526 -137263762 - MIR SINE MIR -19 243 102 1933 116 0 10 chr10 8325591 8325883 -137263405 - AluSx SINE Alu -1 311 23 988 153 47 0 chr10 8326168 8326338 -137262950 - AluJo SINE Alu -131 181 4 2122 107 0 0 chr10 8326577 8326867 -137262421 + AluSc SINE Alu 2 291 -18 1721 142 0 37 chr10 8326879 8327202 -137262086 + AluJo SINE Alu 1 311 -1 28 29 0 0 chr10 8327757 8327792 -137261496 + AT_rich Low_complexity Low_complexity 1 35 0 1753 150 0 32 chr10 8327792 8328105 -137261183 + AluSx SINE Alu 1 303 -9 1492 166 7 25 chr10 8328124 8328401 -137260887 - AluJo SINE Alu -40 272 1 1814 62 25 16 chr10 8328783 8329027 -137260261 - L1PA10 LINE L1 -3 6165 5920 21 0 0 0 chr10 8329063 8329084 -137260204 + AT_rich Low_complexity Low_complexity 1 21 0 1436 196 13 16 chr10 8329679 8329985 -137259303 + AluJo SINE Alu 1 305 -7 2136 92 0 0 chr10 8330250 8330533 -137258755 - AluSg SINE Alu -27 283 1 382 298 0 0 chr10 8331482 8331576 -137257712 + MIR SINE MIR 169 262 0 879 105 0 53 chr10 8331591 8331724 -137257564 + FLAM_C SINE Alu 2 127 -6 1208 154 112 63 chr10 8331762 8332048 -137257240 + AluSp SINE Alu 1 300 -3 278 139 23 0 chr10 8332050 8332093 -137257195 + AluJ/F(R)AM SINE Alu 168 211 -91 1223 110 0 16 chr10 8332125 8332307 -137256981 + AluSg/x SINE Alu 134 312 0 2006 132 0 0 chr10 8333259 8333547 -137255741 + AluSx SINE Alu 1 288 -24 778 149 0 22 chr10 8333680 8333814 -137255474 + FLAM_C SINE Alu 1 131 -2 28 0 0 0 chr10 8334927 8334955 -137254333 + AT_rich Low_complexity Low_complexity 1 28 0 1871 126 0 4 chr10 8334957 8335235 -137254053 + AluSx SINE Alu 3 279 -33 1322 154 14 0 chr10 8335266 8335480 -137253808 + AluSg/x SINE Alu 86 302 -10 218 310 42 0 chr10 8335543 8335614 -137253674 + MIR SINE MIR 111 184 -78 227 167 368 53 chr10 8335682 8335796 -137253492 + L2 LINE L2 3164 3313 0 396 246 70 91 chr10 8335808 8336007 -137253281 - MIR SINE MIR -4 258 64 285 212 273 0 chr10 8336819 8336918 -137252370 + L1ME4a LINE L1 5996 6121 0 405 0 0 0 chr10 8337076 8337121 -137252167 + (CCAA)n Simple_repeat Simple_repeat 2 46 0 2005 128 3 0 chr10 8337200 8337497 -137251791 - AluSx SINE Alu -14 298 1 263 94 0 19 chr10 8337503 8337556 -137251732 + (TTTA)n Simple_repeat Simple_repeat 1 52 0 1565 179 14 10 chr10 8337558 8337854 -137251434 - AluJb SINE Alu -15 297 1 25 31 0 0 chr10 8338078 8338110 -137251178 + AT_rich Low_complexity Low_complexity 1 32 0 704 50 0 40 chr10 8338481 8338581 -137250707 + L1PA5 LINE L1 6059 6154 0 235 384 47 6 chr10 8338871 8339043 -137250245 + MIR3 SINE MIR 28 206 -2 207 217 43 0 chr10 8339416 8339462 -137249826 + MIR SINE MIR 96 143 -65 1886 135 0 42 chr10 8339524 8339836 -137249452 - AluSg SINE Alu -11 299 1 2093 101 0 0 chr10 8340810 8341096 -137248192 - AluSg SINE Alu -4 306 21 1493 167 27 38 chr10 8341137 8341430 -137247858 + AluJb SINE Alu 1 290 -22 2753 151 11 6 chr10 8344369 8344845 -137244443 - L1PA15 LINE L1 0 6165 5688 668 301 51 9 chr10 8344845 8345061 -137244227 + MIR SINE MIR 23 247 -15 335 317 18 41 chr10 8345394 8345615 -137243673 - HAL1 LINE L1 0 2507 2292 882 182 17 17 chr10 8345645 8345826 -137243462 + MER53 DNA DNA 1 181 -8 600 231 88 6 chr10 8345827 8345987 -137243301 - FAM SINE Alu -2 173 1 33 69 0 30 chr10 8346894 8346927 -137242361 + AT_rich Low_complexity Low_complexity 1 33 -65 2181 67 3 20 chr10 8346927 8347224 -137242064 - AluY SINE Alu -19 292 1 33 69 0 30 chr10 8347224 8347291 -137241997 + AT_rich Low_complexity Low_complexity 33 98 0 1733 140 13 33 chr10 8347495 8347802 -137241486 - AluJo SINE Alu -11 301 1 1917 116 0 41 chr10 8348732 8349057 -137240231 + AluSx SINE Alu 1 313 0 364 289 159 15 chr10 8349269 8349470 -137239818 + MIR SINE MIR 9 238 -24 797 146 8 0 chr10 8350059 8350189 -137239099 + AluSg/x SINE Alu 182 312 0 513 0 0 0 chr10 8350467 8350524 -137238764 + (TTTA)n Simple_repeat Simple_repeat 3 59 0 1655 156 0 32 chr10 8350530 8350813 -137238475 - AluJo SINE Alu -38 274 1 228 122 0 0 chr10 8351446 8351487 -137237801 + (CA)n Simple_repeat Simple_repeat 1 41 0 314 234 317 0 chr10 8351669 8351814 -137237474 - MIR SINE MIR -61 201 11 340 354 48 7 chr10 8351821 8351968 -137237320 - MIR3 SINE MIR -33 175 23 1086 146 6 0 chr10 8352719 8352884 -137236404 - AluJb SINE Alu -11 301 136 542 285 85 10 chr10 8353243 8353444 -137235844 - MIR SINE MIR -13 249 33 1708 184 3 3 chr10 8353915 8354208 -137235080 + AluJo SINE Alu 1 293 -19 2060 132 0 3 chr10 8354210 8354498 -137234790 + AluSg SINE Alu 1 287 -23 198 118 0 0 chr10 8354511 8354545 -137234743 + (CAAAAA)n Simple_repeat Simple_repeat 4 37 0 314 298 40 8 chr10 8354554 8354678 -137234610 - MIR3 SINE MIR -15 193 66 1896 152 20 3 chr10 8355541 8355837 -137233451 - AluJb SINE Alu -11 301 1 1279 160 55 108 chr10 8355885 8355973 -137233315 + AluJb SINE Alu 1 92 -220 2724 46 0 0 chr10 8355973 8356279 -137233009 + AluY SINE Alu 1 306 -5 1279 160 55 108 chr10 8356279 8356515 -137232773 + AluJb SINE Alu 92 308 -4 240 86 0 0 chr10 8357043 8357078 -137232210 + (TTTA)n Simple_repeat Simple_repeat 2 36 0 630 226 0 0 chr10 8357081 8357196 -137232092 - AluJb SINE Alu -196 116 2 2462 72 0 13 chr10 8358248 8358552 -137230736 - AluSp SINE Alu -13 300 1 23 0 0 0 chr10 8358690 8358713 -137230575 + AT_rich Low_complexity Low_complexity 1 23 0 691 190 0 0 chr10 8358809 8358925 -137230363 + FRAM SINE Alu 41 156 -20 277 346 155 30 chr10 8359388 8359717 -137229571 + L2 LINE L2 2397 2766 -548 1754 152 24 14 chr10 8359922 8360218 -137229070 - AluJo SINE Alu -13 299 1 242 239 0 0 chr10 8360291 8360337 -137228951 + L2 LINE L2 3137 3182 -90 844 86 44 15 chr10 8360967 8361386 -137227902 + (TCTA)n Simple_repeat Simple_repeat 1 431 0 455 192 0 0 chr10 8361386 8361464 -137227824 - FLAM_A SINE Alu -25 117 40 2212 113 0 0 chr10 8361885 8362177 -137227111 - AluSx SINE Alu -9 303 12 1584 161 73 11 chr10 8362366 8362690 -137226598 + AluJb SINE Alu 1 312 0 200 315 76 0 chr10 8363808 8363900 -137225388 - L2 LINE L2 -860 2454 2356 1190 96 11 0 chr10 8363915 8364093 -137225195 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 1606 160 30 11 chr10 8364108 8364377 -137224911 - AluSx SINE Alu -38 274 1 1002 192 12 0 chr10 8364380 8364552 -137224736 - FAM SINE Alu -1 174 1 369 232 238 11 chr10 8364552 8364737 -137224551 - L2 LINE L2 -950 2364 2138 808 126 0 44 chr10 8365294 8365429 -137223859 - FLAM_C SINE Alu 0 133 5 1621 168 8 0 chr10 8365962 8366224 -137223064 + AluJo SINE Alu 27 290 -22 250 287 0 25 chr10 8366830 8366930 -137222358 - MIR SINE MIR -62 146 63 198 274 62 26 chr10 8368096 8368209 -137221079 + MIR SINE MIR 90 206 -56 324 301 29 0 chr10 8368253 8368356 -137220932 + MIR SINE MIR 131 236 -26 2078 137 7 10 chr10 8368734 8369040 -137220248 - AluJb SINE Alu -7 305 1 359 237 43 21 chr10 8369078 8369171 -137220117 + L2 LINE L2 3197 3291 -22 444 106 77 135 chr10 8370011 8370061 -137219227 + HY3 scRNA scRNA 1 43 -58 1951 154 3 10 chr10 8370061 8370372 -137218916 - AluJo SINE Alu -3 309 1 444 106 77 135 chr10 8370372 8370425 -137218863 + HY3 scRNA scRNA 43 98 -3 2024 155 30 0 chr10 8370529 8370832 -137218456 - AluSx SINE Alu 0 312 1 260 227 41 21 chr10 8371115 8371212 -137218076 + CT-rich Low_complexity Low_complexity 4 102 0 312 273 132 34 chr10 8372235 8372440 -137216848 - MER112 DNA MER1_type -23 237 13 402 253 156 21 chr10 8372595 8372832 -137216456 - L1ME4a LINE L1 -1 6120 5852 2409 97 0 0 chr10 8372872 8373183 -137216105 + AluSq SINE Alu 1 311 -2 1593 149 31 35 chr10 8373510 8373771 -137215517 - AluJo SINE Alu -50 262 3 1986 144 0 20 chr10 8373932 8374237 -137215051 - AluSx SINE Alu -13 299 1 225 278 31 10 chr10 8375743 8375840 -137213448 + GA-rich Low_complexity Low_complexity 5 103 0 255 236 0 0 chr10 8376128 8376200 -137213088 + (CA)n Simple_repeat Simple_repeat 2 73 0 2199 116 0 6 chr10 8376210 8376521 -137212767 - AluSx SINE Alu -3 309 1 332 291 10 65 chr10 8377607 8377667 -137211621 - MER5A DNA MER1_type -1 188 126 1793 150 3 52 chr10 8377667 8377974 -137211314 + AluJo SINE Alu 1 292 -20 332 291 10 65 chr10 8377974 8378112 -137211176 - MER5A DNA MER1_type -63 126 1 209 33 33 0 chr10 8379700 8379730 -137209558 + (CCCCCA)n Simple_repeat Simple_repeat 6 36 0 189 0 0 0 chr10 8379789 8379810 -137209478 + (T)n Simple_repeat Simple_repeat 1 21 0 21 0 0 0 chr10 8380180 8380201 -137209087 + AT_rich Low_complexity Low_complexity 1 21 0 1555 201 32 0 chr10 8380509 8380792 -137208496 - AluJb SINE Alu -18 294 3 376 306 25 0 chr10 8383619 8383740 -137205548 + MIR SINE MIR 28 151 -111 707 77 0 0 chr10 8383747 8383838 -137205450 - AluY SINE Alu -16 295 205 271 260 31 10 chr10 8383843 8383939 -137205349 + MIR SINE MIR 150 247 -15 635 277 54 0 chr10 8384450 8384634 -137204654 + MIR SINE MIR 59 252 -10 415 188 77 60 chr10 8385203 8385320 -137203968 - HAL1 LINE L1 0 2507 2389 709 143 36 0 chr10 8385328 8385440 -137203848 - FLAM_A SINE Alu -11 131 16 961 248 134 50 chr10 8385441 8385812 -137203476 - HAL1 LINE L1 -127 2380 2042 2182 130 0 13 chr10 8385812 8386128 -137203160 + AluSx SINE Alu 1 312 0 961 248 134 50 chr10 8386128 8386396 -137202892 - HAL1 LINE L1 -465 2042 1687 703 212 53 11 chr10 8386393 8386582 -137202706 - HAL1 LINE L1 -1042 1465 1269 * 461 167 8 92 chr10 8386585 8386705 -137202583 - FRAM SINE Alu -7 169 60 278 282 76 13 chr10 8386984 8387120 -137202168 - MIR3 SINE MIR -14 194 51 1987 135 0 44 chr10 8387276 8387594 -137201694 + AluJo SINE Alu 1 304 -8 771 169 7 54 chr10 8387643 8387791 -137201497 + FLAM_C SINE Alu 2 142 -1 731 191 5 53 chr10 8388799 8388987 -137200301 - MER53 DNA DNA 0 189 11 30 0 0 0 chr10 8389116 8389146 -137200142 + AT_rich Low_complexity Low_complexity 1 30 0 686 203 16 0 chr10 8389146 8389269 -137200019 - FLAM_C SINE Alu -17 126 2 979 178 0 0 chr10 8389461 8389613 -137199675 + FRAM SINE Alu 5 156 -10 284 313 0 0 chr10 8389881 8389945 -137199343 + (CACG)n Simple_repeat Simple_repeat 4 67 0 240 86 0 0 chr10 8389946 8389981 -137199307 + (TC)n Simple_repeat Simple_repeat 1 35 0 524 320 50 11 chr10 8390653 8390934 -137198354 + L1ME4a LINE L1 5625 5916 -205 319 254 66 16 chr10 8391062 8391184 -137198104 + L1ME4a LINE L1 5985 6112 -9 1314 107 11 0 chr10 8391451 8391628 -137197660 + AluSq SINE Alu 1 179 -134 388 133 0 0 chr10 8391628 8391688 -137197600 - AluS SINE Alu -243 60 1 2275 78 10 0 chr10 8392291 8392585 -137196703 - AluY SINE Alu -14 297 1 2331 106 3 0 chr10 8392804 8393106 -137196182 + AluSx SINE Alu 1 303 -9 2228 105 0 3 chr10 8393292 8393587 -137195701 + AluSg SINE Alu 8 301 -9 993 172 0 22 chr10 8393608 8393788 -137195500 - L1MC1 LINE L1 -190 6143 5968 887 114 0 0 chr10 8393788 8393902 -137195386 - AluJo SINE Alu -20 292 179 762 185 8 0 chr10 8393902 8394032 -137195256 - AluJo SINE Alu -180 132 2 4087 153 3 16 chr10 8394034 8394727 -137194561 - L1MC1 LINE L1 -358 5975 5292 862 146 8 0 chr10 8395668 8395798 -137193490 - FLAM_C SINE Alu -2 131 1 216 0 0 0 chr10 8396184 8396208 -137193080 + (TTTAA)n Simple_repeat Simple_repeat 5 28 0 1774 54 27 0 chr10 8396208 8396429 -137192859 - L1PA10 LINE L1 -22 6146 5920 21 0 0 0 chr10 8396465 8396486 -137192802 + AT_rich Low_complexity Low_complexity 1 21 0 1527 196 13 16 chr10 8397081 8397387 -137191901 + AluJo SINE Alu 1 305 -7 2263 92 0 0 chr10 8397652 8397935 -137191353 - AluSg SINE Alu -27 283 1 801 115 0 54 chr10 8398995 8399125 -137190163 + FLAM_C SINE Alu 5 127 -6 1163 155 116 60 chr10 8399163 8399447 -137189841 + AluSp SINE Alu 1 300 -3 276 139 23 0 chr10 8399449 8399492 -137189796 + AluJ/F(R)AM SINE Alu 168 211 -91 1336 96 0 0 chr10 8399524 8399691 -137189597 + AluSg/x SINE Alu 132 298 -12 391 159 0 0 chr10 8400718 8400787 -137188501 - L1M LINE L1 -984 5360 5292 199 191 95 0 chr10 8401791 8401833 -137187455 + L2 LINE L2 3175 3220 -52 265 174 0 0 chr10 8402107 8402153 -137187135 - L1MC/D LINE L1 -1934 5851 5806 237 133 61 20 chr10 8402160 8402258 -137187030 + (TCTA)n Simple_repeat Simple_repeat 1 102 0 507 252 35 0 chr10 8402535 8402650 -137186638 + LTR67 LTR ERVL 399 517 -40 2560 118 74 22 chr10 8404275 8404682 -137184606 - MSTA LTR MaLR 0 428 1 270 0 0 0 chr10 8405232 8405262 -137184026 + (TTTA)n Simple_repeat Simple_repeat 2 31 0 2142 111 40 7 chr10 8407110 8407408 -137181880 - AluSc SINE Alu -1 308 1 3887 76 38 0 chr10 8408753 8409253 -137180035 + L1PA13 LINE L1 5642 6160 -3 1112 257 40 81 chr10 8409333 8409516 -137179772 + L2 LINE L2 1997 2186 -1128 2186 131 0 0 chr10 8409516 8409814 -137179474 - AluSx SINE Alu -14 298 1 1112 257 40 81 chr10 8409814 8410101 -137179187 + L2 LINE L2 2186 2448 -866 959 276 99 14 chr10 8410104 8410456 -137178832 + L2 LINE L2 2238 2619 -695 1740 146 46 4 chr10 8410527 8410807 -137178481 - AluJb SINE Alu -20 292 1 478 319 13 4 chr10 8410832 8411064 -137178224 - L1M4 LINE L1 -943 5186 4953 * 1218 288 59 48 chr10 8411060 8411699 -137177589 - L1MEd LINE L1 -3270 2859 2225 2303 140 28 8 chr10 8411699 8412056 -137177232 - THE1B LTR MaLR 0 364 1 1218 288 59 48 chr10 8412056 8412254 -137177034 - L1MEd LINE L1 -3904 2225 2031 935 254 68 66 chr10 8412509 8413519 -137175769 - L1MEd LINE L1 -4646 1664 604 221 172 16 0 chr10 8414002 8414066 -137175222 + (TA)n Simple_repeat Simple_repeat 1 65 0 261 0 0 0 chr10 8414071 8414100 -137175188 + (TG)n Simple_repeat Simple_repeat 2 30 0 245 276 63 87 chr10 8414179 8414306 -137174982 - L2 LINE L2 -15 3257 3134 1816 168 3 3 chr10 8414323 8414615 -137174673 - AluJo SINE Alu -20 292 1 345 129 0 0 chr10 8414977 8415047 -137174241 + (TG)n Simple_repeat Simple_repeat 1 70 0 1152 247 57 46 chr10 8415047 8415436 -137173852 - MLT2C2 LTR ERVL -71 393 1 1054 164 0 23 chr10 8415697 8415868 -137173420 + AluJb SINE Alu 121 287 -25 213 39 0 0 chr10 8415873 8415899 -137173389 + (CAAA)n Simple_repeat Simple_repeat 3 28 0 876 195 197 82 chr10 8416026 8416506 -137172782 + MLT1F1 LTR MaLR 1 565 -2 407 240 0 8 chr10 8416843 8416951 -137172337 + (CA)n Simple_repeat Simple_repeat 2 110 -11 1858 157 7 7 chr10 8416951 8417245 -137172043 - AluSx SINE Alu -18 294 1 407 240 0 8 chr10 8417245 8417257 -137172031 + (CA)n Simple_repeat Simple_repeat 110 121 0 219 295 66 0 chr10 8417274 8417335 -137171953 - MER91A DNA MER1_type -3 193 129 581 310 38 0 chr10 8417401 8417559 -137171729 - MER91A DNA MER1_type -20 176 13 1722 171 17 0 chr10 8419403 8419696 -137169592 + AluJo SINE Alu 1 298 -14 2000 155 0 10 chr10 8419756 8420066 -137169222 - AluSx SINE Alu -5 307 1 180 77 0 0 chr10 8420092 8420118 -137169170 + (CA)n Simple_repeat Simple_repeat 1 26 0 1850 167 0 7 chr10 8420993 8421293 -137167995 + AluJo SINE Alu 1 298 -14 2178 124 0 0 chr10 8421432 8421731 -137167557 - AluSq SINE Alu -14 299 1 1592 170 12 8 chr10 8421818 8422077 -137167211 - AluJo SINE Alu -52 260 1 198 0 0 0 chr10 8422262 8422284 -137167004 + (TA)n Simple_repeat Simple_repeat 2 23 0 1926 137 0 14 chr10 8422933 8423217 -137166071 + AluSc SINE Alu 1 280 -29 317 361 16 0 chr10 8423396 8423518 -137165770 - MIR3 SINE MIR -38 170 47 1995 92 8 0 chr10 8423678 8423940 -137165348 - L1PA10 LINE L1 -12 6156 5893 5163 71 3 3 chr10 8424263 8424895 -137164393 - L1PA10 LINE L1 -12 6156 5525 350 308 47 35 chr10 8426416 8426588 -137162700 + MIR3 SINE MIR 17 190 -18 290 292 10 10 chr10 8427042 8427138 -137162150 + MER103 DNA DNA 37 132 -34 331 266 105 21 chr10 8427222 8427365 -137161923 + L1M4 LINE L1 5075 5229 -917 361 296 108 11 chr10 8428962 8429138 -137160150 - MIR SINE MIR -23 239 47 2090 94 0 4 chr10 8429143 8429410 -137159878 + AluSx SINE Alu 36 301 -11 340 318 162 1 chr10 8429728 8429887 -137159401 - MIR SINE MIR -70 138 14 248 216 20 0 chr10 8429885 8429936 -137159352 + L2 LINE L2 3262 3313 0 * 1753 179 7 0 chr10 8429976 8430267 -137159021 - AluSx SINE Alu -18 294 2 1901 154 0 7 chr10 8430336 8430634 -137158654 + AluJo SINE Alu 17 312 0 1527 190 30 23 chr10 8431272 8431577 -137157711 - AluJb SINE Alu -5 307 1 258 347 24 45 chr10 8432227 8432371 -137156917 + MIR3 SINE MIR 40 181 -27 253 182 23 0 chr10 8432454 8432498 -137156790 - MER57A LTR ERV1 -64 339 295 216 348 90 23 chr10 8432911 8433210 -137156078 - L2 LINE L2 -340 2974 2656 1066 145 60 20 chr10 8433214 8433247 -137156041 + AluSg/x SINE Alu 86 116 -193 1884 84 0 8 chr10 8433247 8433512 -137155776 + AluSq SINE Alu 51 313 0 1066 145 60 20 chr10 8433512 8433677 -137155611 + AluSg/x SINE Alu 116 293 -16 381 328 85 48 chr10 8433783 8434076 -137155212 - L2 LINE L2 -862 2452 2149 220 312 50 50 chr10 8434439 8434580 -137154708 - L2 LINE L2 -1635 1679 1539 1422 168 45 63 chr10 8434681 8435020 -137154268 + AluJb SINE Alu 1 334 0 743 144 0 0 chr10 8435208 8435312 -137153976 + FRAM SINE Alu 49 152 -24 209 338 54 0 chr10 8435326 8435400 -137153888 - L2 LINE L2 -2 3311 3234 334 321 3 8 chr10 8435532 8435653 -137153635 + MIR SINE MIR 51 170 -62 1956 133 85 20 chr10 8435675 8436027 -137153261 + THE1C LTR MaLR 1 375 0 195 139 0 0 chr10 8436347 8436383 -137152905 + (TTCA)n Simple_repeat Simple_repeat 4 39 0 1786 187 0 13 chr10 8436488 8436804 -137152484 + AluJo SINE Alu 1 312 0 497 272 69 13 chr10 8436968 8437186 -137152102 - MIR SINE MIR -13 249 19 1691 120 0 154 chr10 8437275 8437632 -137151656 - AluJb SINE Alu -10 302 1 757 229 67 48 chr10 8437734 8438048 -137151240 + L1MC5 LINE L1 7631 7950 -11 324 336 49 8 chr10 8438230 8438352 -137150936 + MIR3 SINE MIR 74 200 -8 1729 142 26 8 chr10 8439153 8439450 -137149838 + AluJo SINE Alu 12 313 0 1109 159 17 0 chr10 8439846 8440022 -137149266 - AluJ SINE Alu 0 312 134 2077 118 4 0 chr10 8440022 8440302 -137148986 - AluSx SINE Alu -13 299 19 1824 112 20 58 chr10 8440536 8440857 -137148431 - AluSx SINE Alu 0 310 1 318 167 0 0 chr10 8440875 8440935 -137148353 + CT-rich Low_complexity Low_complexity 2 61 0 904 153 8 0 chr10 8440935 8441066 -137148222 - AluJ SINE Alu -169 133 2 1488 171 3 49 chr10 8441461 8441747 -137147541 - AluJb SINE Alu -39 273 1 26 30 0 0 chr10 8441754 8441787 -137147501 + AT_rich Low_complexity Low_complexity 1 33 0 833 163 8 0 chr10 8441789 8441912 -137147376 - FLAM_C SINE Alu -18 125 2 853 299 68 35 chr10 8442057 8442575 -137146713 + L1ME4a LINE L1 5392 5926 -195 2034 136 7 3 chr10 8442700 8442994 -137146294 + AluSx SINE Alu 1 295 -17 2363 96 3 0 chr10 8443073 8443376 -137145912 + AluSp SINE Alu 1 304 -9 204 274 71 12 chr10 8443655 8443739 -137145549 - MIR SINE MIR -111 151 63 491 164 4 246 chr10 8444257 8444345 -137144943 - MER5A DNA MER1_type -13 176 176 1991 101 19 0 chr10 8444345 8444613 -137144675 - AluSx SINE Alu -18 294 22 491 164 4 246 chr10 8444613 8444756 -137144532 - MER5A DNA MER1_type -12 177 1 211 85 43 0 chr10 8445127 8445174 -137144114 + (TA)n Simple_repeat Simple_repeat 1 49 0 25 0 0 0 chr10 8445174 8445199 -137144089 + AT_rich Low_complexity Low_complexity 1 25 0 204 314 0 0 chr10 8445579 8445630 -137143658 + L3 LINE CR1 1516 1566 -11 2193 109 0 3 chr10 8445689 8445983 -137143305 + AluSq SINE Alu 5 297 -16 21 0 0 0 chr10 8446204 8446225 -137143063 + AT_rich Low_complexity Low_complexity 1 21 0 4698 123 11 32 chr10 8446605 8446863 -137142425 - L1PB4 LINE L1 0 6156 5894 2102 133 0 0 chr10 8446863 8447157 -137142131 - AluY SINE Alu -17 294 1 4698 123 11 32 chr10 8447157 8447680 -137141608 - L1PB4 LINE L1 -262 5894 5391 260 307 23 0 chr10 8448098 8448186 -137141102 + GA-rich Low_complexity Low_complexity 1 90 0 22 0 0 0 chr10 8448609 8448631 -137140657 + AT_rich Low_complexity Low_complexity 1 22 0 1603 205 0 7 chr10 8448747 8449049 -137140239 + AluJo SINE Alu 2 301 -11 1975 137 13 10 chr10 8449920 8450227 -137139061 + AluSx SINE Alu 5 312 0 222 218 0 0 chr10 8450252 8450307 -137138981 + A-rich Low_complexity Low_complexity 1 55 0 766 156 0 71 chr10 8450603 8450744 -137138544 + FLAM_C SINE Alu 1 131 -2 1337 198 41 36 chr10 8450801 8451250 -137138038 - Charlie1b DNA MER1_type 0 523 1 2449 88 0 0 chr10 8452031 8452336 -137136952 - AluSc SINE Alu -4 305 1 287 318 86 75 chr10 8452702 8452982 -137136306 - L2 LINE L2 -5 3267 2985 446 279 89 26 chr10 8453049 8453239 -137136049 - MLT1K LTR MaLR -9 579 378 875 201 0 0 chr10 8455074 8455223 -137134065 - FRAM SINE Alu -26 150 2 624 266 110 17 chr10 8455227 8455464 -137133824 + MER112 DNA MER1_type 1 259 -1 1197 147 0 26 chr10 8456173 8456363 -137132925 + AluJo SINE Alu 84 268 -44 240 287 50 88 chr10 8456570 8456664 -137132624 + MLT1L LTR MaLR 367 452 -163 1712 181 0 10 chr10 8456664 8456957 -137132331 + AluJo SINE Alu 5 294 -18 240 287 50 88 chr10 8456957 8457043 -137132245 + MLT1L LTR MaLR 452 540 -75 483 173 0 0 chr10 8457068 8457178 -137132110 + CT-rich Low_complexity Low_complexity 2 111 0 1847 126 69 0 chr10 8457178 8457440 -137131848 - AluSx SINE Alu -32 280 1 1969 155 7 3 chr10 8457974 8458284 -137131004 - AluJo SINE Alu -1 311 1 823 174 83 53 chr10 8458515 8458662 -137130626 - MER33 DNA MER1_type -2261 324 163 1832 166 0 4 chr10 8458662 8458962 -137130326 + AluSx SINE Alu 9 307 0 823 174 83 53 chr10 8458962 8459077 -137130211 - MER33 DNA MER1_type -2422 163 53 281 85 34 0 chr10 8459415 8459650 -137129638 + CT-rich Low_complexity Low_complexity 1 180 0 1945 157 3 25 chr10 8459650 8459969 -137129319 - AluSq SINE Alu 0 547 1 213 232 189 63 chr10 8459981 8460076 -137129212 + MIR SINE MIR 74 180 -82 186 233 123 55 chr10 8460104 8460177 -137129111 + L2 LINE L2 3129 3206 -66 909 46 0 0 chr10 8461023 8461131 -137128157 + L1MA1 LINE L1 6195 6302 0 189 0 81 27 chr10 8461179 8461216 -137128072 + (TTTA)n Simple_repeat Simple_repeat 2 40 0 3135 60 34 0 chr10 8461216 8461597 -137127691 - L1PA8 LINE L1 -17 6155 5762 907 142 7 13 chr10 8461604 8461759 -137127529 + L1MA9 LINE L1 6159 6312 0 364 268 121 19 chr10 8462366 8462523 -137126765 - MIR SINE MIR -67 195 23 272 293 24 12 chr10 8462661 8462743 -137126545 + L2 LINE L2 3227 3309 -4 1611 183 23 17 chr10 8462751 8463051 -137126237 + AluJb SINE Alu 11 312 0 217 163 23 0 chr10 8463457 8463500 -137125788 + A-rich Low_complexity Low_complexity 5 48 0 1761 203 7 0 chr10 8463719 8464029 -137125259 + AluJo SINE Alu 1 312 0 2181 124 0 3 chr10 8464280 8464587 -137124701 + AluSq SINE Alu 1 306 -7 285 262 39 29 chr10 8464877 8464980 -137124308 + MIR SINE MIR 73 176 -86 209 270 108 14 chr10 8465078 8465152 -137124136 + MIR SINE MIR 178 258 -4 1627 145 16 4 chr10 8465534 8465789 -137123499 - AluJo SINE Alu -15 297 40 2212 124 0 10 chr10 8466208 8466515 -137122773 - AluSx SINE Alu -8 304 1 357 43 0 0 chr10 8467236 8467283 -137122005 + (CA)n Simple_repeat Simple_repeat 1 47 0 1799 187 0 13 chr10 8469249 8469564 -137119724 - AluJo SINE Alu -1 311 1 353 266 19 19 chr10 8470674 8470835 -137118453 - MIR SINE MIR -63 145 8 220 214 71 18 chr10 8470993 8471049 -137118239 - MIR SINE MIR -96 166 108 2131 139 0 0 chr10 8471304 8471598 -137117690 + AluSx SINE Alu 1 294 -18 868 172 0 0 chr10 8471763 8471891 -137117397 - FLAM_A SINE Alu -5 128 1 1724 179 3 13 chr10 8473030 8473343 -137115945 + AluJo SINE Alu 1 310 -2 1942 173 0 3 chr10 8473377 8473689 -137115599 + AluSx SINE Alu 1 311 -1 534 298 41 1 chr10 8473712 8473881 -137115407 - MIR SINE MIR -31 177 46 230 311 56 0 chr10 8473916 8474006 -137115282 + MIR SINE MIR 168 262 0 23 68 0 0 chr10 8474102 8474146 -137115142 + AT_rich Low_complexity Low_complexity 1 44 0 843 127 8 8 chr10 8474146 8474264 -137115024 - FLAM_C SINE Alu -15 118 1 2247 108 3 0 chr10 8475982 8476287 -137113001 + AluSg1 SINE Alu 1 306 -3 318 328 88 37 chr10 8478698 8479106 -137110182 - L2 LINE L2 -8 3264 2836 268 291 12 0 chr10 8479106 8479192 -137110096 + (CGGGG)n Simple_repeat Simple_repeat 4 90 0 21 36 0 0 chr10 8479542 8479570 -137109718 + AT_rich Low_complexity Low_complexity 1 28 0 342 295 45 0 chr10 8479598 8479710 -137109578 - MIR SINE MIR 0 262 146 1778 170 10 10 chr10 8479751 8480051 -137109237 - AluJo SINE Alu -12 300 1 22 0 0 0 chr10 8481505 8481527 -137107761 + AT_rich Low_complexity Low_complexity 1 22 0 562 223 69 23 chr10 8481758 8481933 -137107355 + MIR SINE MIR 34 216 -46 240 292 167 0 chr10 8482828 8482900 -137106388 + MER5A DNA MER1_type 2 85 -104 1893 143 7 0 chr10 8483343 8483623 -137105665 - AluJo SINE Alu -26 286 5 217 318 16 16 chr10 8484493 8484556 -137104732 - MIR SINE MIR -116 146 84 965 196 4 94 chr10 8484647 8484882 -137104406 - MER20 DNA MER1_type -4 215 2 702 167 25 8 chr10 8484997 8485117 -137104171 + FLAM_A SINE Alu 2 123 -10 345 309 12 0 chr10 8486193 8486355 -137102933 + (TA)n Simple_repeat Simple_repeat 2 165 0 302 313 0 0 chr10 8486363 8486446 -137102842 + L1MC4 LINE L1 6614 6696 -1346 803 143 0 8 chr10 8486446 8486565 -137102723 - FLAM_C SINE Alu -24 119 2 1988 228 49 62 chr10 8486685 8487312 -137101976 - L1ME1 LINE L1 -6 6160 5542 1977 117 46 0 chr10 8487905 8488188 -137101100 - AluSx SINE Alu -15 297 2 188 67 33 0 chr10 8488676 8488706 -137100582 + (TTTC)n Simple_repeat Simple_repeat 2 32 0 915 180 25 0 chr10 8489229 8489390 -137099898 - MER5A DNA MER1_type -24 165 1 260 286 8 92 chr10 8489437 8489493 -137099795 - MIR3 SINE MIR 0 208 166 1193 187 22 40 chr10 8489493 8489718 -137099570 - MER58A DNA MER1_type 0 224 4 260 286 8 92 chr10 8489718 8489780 -137099508 - MIR3 SINE MIR -42 166 100 1191 216 69 79 chr10 8489882 8489895 -137099393 - MLT1F1 LTR MaLR 0 559 547 2378 150 8 35 chr10 8489895 8490296 -137098992 - MLT1B LTR MaLR 0 390 1 1191 216 69 79 chr10 8490296 8490823 -137098465 - MLT1F1 LTR MaLR -12 547 6 717 148 10 0 chr10 8491013 8491114 -137098174 + L1PB4 LINE L1 6039 6140 -16 23 54 0 0 chr10 8491640 8491677 -137097611 + AT_rich Low_complexity Low_complexity 1 37 0 1166 137 103 29 chr10 8491729 8491933 -137097355 + MER20 DNA MER1_type 1 219 0 294 247 132 63 chr10 8492324 8492473 -137096815 - L1ME4a LINE L1 -9 6112 5946 1711 221 152 47 chr10 8492473 8493011 -137096277 + MLT1G1 LTR MaLR 1 595 0 294 247 132 63 chr10 8493011 8493051 -137096237 - L1ME4a LINE L1 -175 5946 5910 290 254 119 51 chr10 8493813 8493931 -137095357 - L2 LINE L2 -1 3312 3187 395 299 160 0 chr10 8494183 8494327 -137094961 + MIR3 SINE MIR 36 202 -6 213 212 53 0 chr10 8494705 8494818 -137094470 + (TA)n Simple_repeat Simple_repeat 1 119 0 255 175 0 0 chr10 8495187 8495244 -137094044 + (TA)n Simple_repeat Simple_repeat 2 58 0 1541 185 58 102 chr10 8496039 8496520 -137092768 + MLT2C2 LTR ERVL 1 460 -4 248 200 31 31 chr10 8496942 8497007 -137092281 + L2 LINE L2 3249 3313 0 490 113 0 72 chr10 8497546 8497740 -137091548 + (TA)n Simple_repeat Simple_repeat 1 180 0 257 208 0 0 chr10 8497742 8497795 -137091493 + GA-rich Low_complexity Low_complexity 1 53 0 1161 68 17 11 chr10 8498460 8498637 -137090651 + (TTTC)n Simple_repeat Simple_repeat 3 180 0 480 208 94 0 chr10 8500537 8500643 -137088645 + MER5A DNA MER1_type 74 189 0 1522 196 0 7 chr10 8500751 8501021 -137088267 - AluJb SINE Alu -44 268 1 700 212 26 36 chr10 8501083 8501276 -137088012 - MLT1J LTR MaLR 0 511 321 875 220 49 52 chr10 8501286 8501734 -137087554 - MLT1D LTR MaLR -6 499 26 679 273 89 25 chr10 8501749 8502075 -137087213 - MLT1J LTR MaLR -164 347 1 1825 158 27 3 chr10 8502282 8502574 -137086714 - AluJo SINE Alu -13 299 1 216 0 0 0 chr10 8502955 8502979 -137086309 + (CAAAA)n Simple_repeat Simple_repeat 2 25 0 199 143 29 0 chr10 8503522 8503557 -137085731 - MIR SINE MIR -65 197 162 354 271 69 7 chr10 8504353 8504497 -137084791 - L1ME4a LINE L1 -1 6120 5968 183 271 21 21 chr10 8504675 8504723 -137084565 + L2 LINE L2 3213 3260 -12 398 339 23 28 chr10 8504829 8505006 -137084282 - MIR SINE MIR -74 188 13 3956 127 30 6 chr10 8505490 8506130 -137083158 + L1PA16 LINE L1 5503 6157 -9 279 203 0 0 chr10 8506131 8506195 -137083093 + (TA)n Simple_repeat Simple_repeat 1 64 0 317 286 0 38 chr10 8506206 8506311 -137082977 - L1MC4 LINE L1 -1337 6705 6605 2088 125 7 0 chr10 8506947 8507236 -137082052 + AluSp SINE Alu 14 304 -9 853 263 50 118 chr10 8507740 8508276 -137081012 + L2 LINE L2 2813 3312 -1 21 0 0 0 chr10 8509068 8509089 -137080199 + AT_rich Low_complexity Low_complexity 1 21 0 1656 173 69 0 chr10 8510395 8510730 -137078558 - MER47A DNA MER2_type -1 365 8 2006 125 7 14 chr10 8510953 8511249 -137078039 + AluSx SINE Alu 1 294 -18 320 267 149 37 chr10 8511560 8511721 -137077567 + L2 LINE L2 3122 3300 -13 487 107 82 2 chr10 8511725 8512212 -137077076 + (TA)n Simple_repeat Simple_repeat 1 526 0 34 24 0 0 chr10 8512212 8512253 -137077035 + AT_rich Low_complexity Low_complexity 1 41 0 360 106 93 0 chr10 8512259 8512420 -137076868 + (TA)n Simple_repeat Simple_repeat 1 176 0 37 52 0 0 chr10 8512420 8512478 -137076810 + AT_rich Low_complexity Low_complexity 1 58 0 478 141 0 116 chr10 8512596 8512649 -137076639 - MER33 DNA MER1_type -2476 109 76 2171 127 0 0 chr10 8512649 8512949 -137076339 - AluSx SINE Alu -12 300 1 478 141 0 116 chr10 8512949 8513016 -137076272 - MER33 DNA MER1_type -2509 76 3 1191 26 28 26 chr10 8514286 8514528 -137074760 + (TTTC)n Simple_repeat Simple_repeat 2 423 0 1105 173 0 11 chr10 8514532 8514717 -137074571 - AluSq SINE Alu -13 300 118 245 306 294 8 chr10 8516546 8516791 -137072497 + L3 LINE CR1 1138 1452 -125 262 300 130 63 chr10 8516832 8517179 -137072109 - L2 LINE L2 -36 3236 2867 754 178 0 15 chr10 8517571 8517706 -137071582 - AluJb SINE Alu -179 133 1 22 70 0 0 chr10 8518259 8518302 -137070986 + AT_rich Low_complexity Low_complexity 1 43 0 25 65 0 0 chr10 8518346 8518392 -137070896 + AT_rich Low_complexity Low_complexity 1 46 0 1890 141 21 3 chr10 8519012 8519296 -137069992 + AluJb SINE Alu 1 289 -23 284 91 80 0 chr10 8519296 8519384 -137069904 + (TA)n Simple_repeat Simple_repeat 2 96 0 301 261 57 0 chr10 8519386 8519474 -137069814 - L1MC4 LINE L1 -1337 6705 6613 656 112 49 14 chr10 8519474 8519825 -137069463 + (TA)n Simple_repeat Simple_repeat 1 363 0 391 128 64 6 chr10 8519861 8520017 -137069271 + (TA)n Simple_repeat Simple_repeat 1 165 0 699 132 7 44 chr10 8520138 8520274 -137069014 - LTR9 LTR ERV1 -481 131 1 386 259 175 21 chr10 8521879 8522022 -137067266 - MIR3 SINE MIR -27 181 17 448 130 13 0 chr10 8522204 8522281 -137067007 + MADE1 DNA Mariner 3 80 0 2200 110 0 0 chr10 8522347 8522638 -137066650 - AluSq SINE Alu -18 295 5 556 319 40 22 chr10 8523227 8523453 -137065835 - MIR SINE MIR 0 262 33 835 216 0 55 chr10 8523510 8523728 -137065560 + MER3 DNA MER1_type 2 207 -2 405 176 28 9 chr10 8523868 8523976 -137065312 + GA-rich Low_complexity Low_complexity 4 113 0 2277 108 7 0 chr10 8524192 8524497 -137064791 + AluSx SINE Alu 1 307 -5 186 338 125 22 chr10 8524698 8524834 -137064454 - MIR3 SINE MIR -24 184 35 305 276 243 17 chr10 8526671 8526852 -137062436 + MIR SINE MIR 4 225 -37 234 91 0 0 chr10 8528183 8528216 -137061072 + (T)n Simple_repeat Simple_repeat 1 33 0 448 274 9 9 chr10 8528615 8528721 -137060567 + L2 LINE L2 3208 3313 0 5413 22 5 2 chr10 8529729 8530365 -137058923 + L1PA4 LINE L1 5516 6153 -2 207 167 0 0 chr10 8530688 8530724 -137058564 + (TTG)n Simple_repeat Simple_repeat 1 36 0 2405 76 0 16 chr10 8531161 8531477 -137057811 + AluSx SINE Alu 1 311 -1 195 338 0 25 chr10 8532083 8532163 -137057125 + MIR SINE MIR 65 142 -66 453 81 0 0 chr10 8534157 8534219 -137055069 + (TCCA)n Simple_repeat Simple_repeat 1 62 0 988 272 25 0 chr10 8535315 8535558 -137053730 - MIR SINE MIR -11 251 3 662 249 83 50 chr10 8536013 8536254 -137053034 - MIR SINE MIR -10 252 4 3082 170 45 5 chr10 8536386 8537063 -137052225 - MER39 LTR ERV1 -3 639 1 27 62 0 0 chr10 8537576 8537624 -137051664 + AT_rich Low_complexity Low_complexity 1 48 0 23 0 0 0 chr10 8537712 8537735 -137051553 + AT_rich Low_complexity Low_complexity 1 23 0 201 293 183 0 chr10 8537795 8537877 -137051411 - MER5C DNA MER1_type 0 324 228 183 156 0 0 chr10 8537890 8537922 -137051366 - MER5C DNA MER1_type -201 123 92 346 334 39 55 chr10 8538517 8538825 -137050463 + L1ME4a LINE L1 5582 5884 -237 228 269 182 50 chr10 8539022 8539264 -137050024 + LTR33A LTR ERVL 229 502 -21 302 225 12 0 chr10 8539266 8539346 -137049942 + CT-rich Low_complexity Low_complexity 1 81 0 474 198 32 0 chr10 8539383 8539509 -137049779 + CT-rich Low_complexity Low_complexity 2 131 0 1045 238 13 36 chr10 8539859 8540161 -137049127 + MLT1F LTR MaLR 43 337 -205 1688 171 50 26 chr10 8540188 8540567 -137048721 - MER39 LTR ERV1 -1 706 319 555 56 0 0 chr10 8540814 8540885 -137048403 + (TTCC)n Simple_repeat Simple_repeat 4 74 0 331 169 23 0 chr10 8540913 8540998 -137048290 - MER39 LTR ERV1 -311 358 255 225 0 0 0 chr10 8541013 8541038 -137048250 + (TTCC)n Simple_repeat Simple_repeat 4 28 0 186 71 0 0 chr10 8541080 8541108 -137048180 + (TTTG)n Simple_repeat Simple_repeat 1 28 0 691 127 24 0 chr10 8541109 8541235 -137048053 + CT-rich Low_complexity Low_complexity 4 132 0 228 100 0 0 chr10 8541236 8541276 -137048012 + (TCTCTG)n Simple_repeat Simple_repeat 3 42 0 1797 185 7 0 chr10 8541287 8541579 -137047709 - AluJb SINE Alu -16 296 3 1522 142 83 0 chr10 8541580 8541868 -137047420 - MER39 LTR ERV1 -394 313 2 520 214 7 62 chr10 8541868 8542004 -137047284 + MLT1F LTR MaLR 405 532 -35 892 106 159 33 chr10 8542159 8542310 -137046978 - AluSg/x SINE Alu -7 303 134 2424 73 0 0 chr10 8544306 8544608 -137044680 - AluY SINE Alu -9 302 1 231 341 79 5 chr10 8546495 8546677 -137042611 + MIR3 SINE MIR 12 207 -1 1386 173 11 50 chr10 8547602 8547995 -137041293 - AluJo SINE Alu 0 419 38 1258 277 106 30 chr10 8548042 8548658 -137040630 + HAL1 LINE L1 1629 2323 -184 821 172 0 8 chr10 8548658 8548792 -137040496 + FLAM_C SINE Alu 1 133 0 1258 277 106 30 chr10 8548792 8548986 -137040302 + HAL1 LINE L1 2323 2501 -6 309 238 148 10 chr10 8549360 8549461 -137039827 + L2 LINE L2 3199 3313 0 324 353 154 0 chr10 8549528 8549820 -137039468 + L2 LINE L2 2638 2974 -340 372 164 0 0 chr10 8550288 8550355 -137038933 + (CA)n Simple_repeat Simple_repeat 1 67 0 337 260 182 39 chr10 8551459 8551613 -137037675 - MIR SINE MIR -86 176 1 318 321 21 86 chr10 8551682 8551728 -137037560 + L2 LINE L2 3142 3189 -83 2142 130 0 3 chr10 8551728 8552029 -137037259 + AluSx SINE Alu 1 300 -12 318 321 21 86 chr10 8552029 8552122 -137037166 + L2 LINE L2 3189 3272 0 538 257 39 56 chr10 8552990 8553169 -137036119 - MIR3 SINE MIR -32 176 1 28 86 0 0 chr10 8553321 8553391 -137035897 + AT_rich Low_complexity Low_complexity 1 70 0 1993 129 0 4 chr10 8553677 8553957 -137035331 + AluSx SINE Alu 1 279 -33 23 0 0 0 chr10 8553997 8554020 -137035268 + AT_rich Low_complexity Low_complexity 1 23 0 819 252 166 19 chr10 8554022 8554383 -137034905 + MLT1J LTR MaLR 98 511 0 282 56 0 0 chr10 8555527 8555563 -137033725 + (TG)n Simple_repeat Simple_repeat 2 37 0 223 265 0 0 chr10 8557175 8557224 -137032064 + (CA)n Simple_repeat Simple_repeat 2 50 0 1963 139 137 11 chr10 8560283 8560663 -137028625 - MSTA LTR MaLR 0 428 1 1782 153 14 14 chr10 8561007 8561319 -137027969 - AluJo SINE Alu 0 312 1 516 206 28 153 chr10 8561473 8561799 -137027489 - L1M4 LINE L1 -1484 4662 4378 428 267 121 11 chr10 8561834 8562107 -137027181 - L1M4 LINE L1 -2465 3681 3379 3673 32 0 0 chr10 8562116 8562551 -137026737 - L1PA3 LINE L1 -5 6150 5716 243 278 156 18 chr10 8563306 8563420 -137025868 - MIR SINE MIR -41 167 35 2026 133 30 0 chr10 8563727 8564028 -137025260 - AluSx SINE Alu -2 310 1 1254 136 166 2 chr10 8564279 8564707 -137024581 - L1PA13 LINE L1 -11 6152 5658 201 333 100 33 chr10 8564842 8564962 -137024326 + L2 LINE L2 3136 3263 -9 363 44 0 0 chr10 8569183 8569228 -137020060 + (CA)n Simple_repeat Simple_repeat 1 45 0 1772 184 0 16 chr10 8571190 8571506 -137017782 - AluJo SINE Alu 0 312 2 181 338 75 12 chr10 8572983 8573063 -137016225 - MIR SINE MIR -163 99 15 365 243 68 79 chr10 8573100 8573277 -137016011 + MIR SINE MIR 33 207 -55 252 0 0 0 chr10 8574233 8574261 -137015027 + (TG)n Simple_repeat Simple_repeat 2 29 0 78 0 0 0 chr10 8574261 8574339 -137014949 + AT_rich Low_complexity Low_complexity 1 78 0 319 236 47 39 chr10 8574339 8574466 -137014822 - L1M4 LINE L1 -2912 3234 3107 52 0 0 0 chr10 8574475 8574527 -137014761 + AT_rich Low_complexity Low_complexity 1 52 0 260 177 35 35 chr10 8574527 8574640 -137014648 + (TATAA)n Simple_repeat Simple_repeat 1 113 0 198 91 55 18 chr10 8574645 8574700 -137014588 + A-rich Low_complexity Low_complexity 2 58 0 296 300 76 57 chr10 8574824 8575034 -137014254 - L2 LINE L2 -3071 243 30 3801 161 85 5 chr10 8576561 8576680 -137012608 - L1MA10 LINE L1 -39 6295 6187 465 19 0 0 chr10 8576680 8576734 -137012554 + (TTTTA)n Simple_repeat Simple_repeat 2 55 0 3801 161 85 5 chr10 8576734 8577367 -137011921 - L1MA10 LINE L1 -147 6187 5483 1834 117 12 4 chr10 8577417 8577666 -137011622 + AluSc SINE Alu 7 257 -52 1087 248 193 39 chr10 8577770 8578287 -137011001 - L2 LINE L2 -2482 832 236 2167 103 6 13 chr10 8578287 8578599 -137010689 + AluSg SINE Alu 1 310 0 420 37 0 0 chr10 8579538 8579592 -137009696 + (CA)n Simple_repeat Simple_repeat 2 55 0 346 188 21 21 chr10 8580399 8580495 -137008793 + CT-rich Low_complexity Low_complexity 1 96 0 261 139 0 0 chr10 8580488 8580531 -137008757 + (TCTCC)n Simple_repeat Simple_repeat 1 43 0 * 391 273 327 0 chr10 8580663 8580828 -137008460 - MIR SINE MIR -26 236 18 319 282 129 29 chr10 8581078 8581248 -137008040 - MIR SINE MIR -45 217 31 1368 143 0 66 chr10 8581662 8581906 -137007382 + AluJo SINE Alu 40 267 -45 217 216 0 0 chr10 8582055 8582092 -137007196 + polypyrimidine Low_complexity Low_complexity 3 39 0 377 182 20 27 chr10 8582099 8582247 -137007041 + (TA)n Simple_repeat Simple_repeat 2 148 0 25 0 0 0 chr10 8582413 8582438 -137006850 + AT_rich Low_complexity Low_complexity 1 25 0 1283 141 13 0 chr10 8582907 8583134 -137006154 - L1MB1 LINE L1 -34 6155 5926 473 145 0 0 chr10 8583135 8583218 -137006070 + L1M3 LINE L1 5570 5652 -516 2592 43 0 0 chr10 8583606 8583909 -137005379 + AluY SINE Alu 2 304 -7 575 259 25 37 chr10 8584429 8584591 -137004697 + MIR3 SINE MIR 46 205 -3 215 143 0 18 chr10 8584815 8584871 -137004417 + (TA)n Simple_repeat Simple_repeat 2 56 0 2249 98 3 0 chr10 8584871 8585156 -137004132 - AluSp SINE Alu -27 286 1 206 275 110 0 chr10 8585929 8586020 -137003268 + MIR SINE MIR 118 218 -44 868 312 83 67 chr10 8586151 8586895 -137002393 + L2 LINE L2 1174 1929 -1385 710 338 115 16 chr10 8586912 8587039 -137002249 + L2 LINE L2 2304 2417 -897 2415 149 14 41 chr10 8587039 8587475 -137001813 - MSTB LTR MaLR -2 424 1 710 338 115 16 chr10 8587475 8587773 -137001515 + L2 LINE L2 2417 2771 -543 375 329 126 11 chr10 8588243 8588520 -137000768 + MLT1J2 LTR MaLR 64 372 -78 532 250 0 8 chr10 8588587 8588711 -137000577 + MER58B DNA MER1_type 219 341 0 242 396 139 0 chr10 8588845 8588989 -137000299 - L2 LINE L2 -5 3267 3104 1200 254 86 17 chr10 8589061 8589467 -136999821 - LTR16A LTR ERVL 0 450 17 214 342 5 86 chr10 8589477 8589664 -136999624 - L2 LINE L2 -210 3062 2891 1014 128 41 0 chr10 8590359 8590531 -136998757 - THE1C LTR MaLR 0 375 197 254 210 16 0 chr10 8590597 8590677 -136998611 + (TATTG)n Simple_repeat Simple_repeat 1 81 0 2175 128 3 13 chr10 8591192 8591504 -136997784 - AluSx SINE Alu -3 309 1 411 303 96 28 chr10 8591598 8591776 -136997512 - L3b LINE CR1 -118 1465 1276 4683 50 0 3 chr10 8593300 8593880 -136995408 - L1PA5 LINE L1 -1 6153 5576 203 255 43 128 chr10 8594005 8594146 -136995142 - L2 LINE L2 -217 3055 2927 729 141 62 23 chr10 8594395 8594523 -136994765 + FLAM_C SINE Alu 1 133 0 21 0 0 0 chr10 8596405 8596426 -136992862 + AT_rich Low_complexity Low_complexity 1 21 0 2487 61 0 0 chr10 8596805 8597098 -136992190 + AluY SINE Alu 3 295 -16 2422 97 0 0 chr10 8597390 8597701 -136991587 + AluSx SINE Alu 1 311 -1 646 322 19 14 chr10 8600503 8600714 -136988574 + MIR SINE MIR 3 214 -48 1577 226 7 0 chr10 8600786 8601136 -136988152 - AluJo SINE Alu 0 352 1 206 231 115 26 chr10 8601139 8601217 -136988071 + L2 LINE L2 3188 3272 0 864 136 0 22 chr10 8602181 8602365 -136986923 + (TTCC)n Simple_repeat Simple_repeat 1 180 0 200 108 0 27 chr10 8602453 8602490 -136986798 + (TCCC)n Simple_repeat Simple_repeat 4 39 0 186 229 16 66 chr10 8602552 8602613 -136986675 - L2 LINE L2 0 3313 3256 230 236 0 18 chr10 8603538 8603593 -136985695 + (TG)n Simple_repeat Simple_repeat 1 54 0 2333 153 9 24 chr10 8604743 8605168 -136984120 + MSTA LTR MaLR 1 419 -9 362 123 0 3 chr10 8605270 8605521 -136983767 + AluSg SINE Alu 1 323 0 566 49 12 0 chr10 8606796 8606878 -136982410 + (CA)n Simple_repeat Simple_repeat 2 84 0 684 206 55 7 chr10 8607858 8608004 -136981284 - MER105 DNA DNA -1 203 51 879 15 2 92 chr10 8608395 8608873 -136980415 + (TA)n Simple_repeat Simple_repeat 1 435 0 235 61 61 51 chr10 8608859 8608957 -136980331 + (CATAT)n Simple_repeat Simple_repeat 2 100 0 * 240 343 52 0 chr10 8609405 8609539 -136979749 + L2 LINE L2 2890 3030 -283 1249 104 5 40 chr10 8609548 8609749 -136979539 - L1MA5A LINE L1 0 6297 6104 1148 145 0 2 chr10 8609752 8609993 -136979295 - AluJb SINE Alu -15 297 16 1665 139 20 10 chr10 8610009 8610303 -136978985 - L1MA5A LINE L1 -187 6110 5814 383 322 82 19 chr10 8610340 8610548 -136978740 + L2 LINE L2 3093 3313 0 2664 45 0 3 chr10 8610701 8611013 -136978275 - AluY SINE Alu 0 311 1 915 68 0 68 chr10 8611013 8611137 -136978151 - L1PA7 LINE L1 -7 6147 6031 1892 128 36 4 chr10 8611138 8611419 -136977869 - AluSx SINE Alu -22 290 1 558 167 0 0 chr10 8611900 8611984 -136977304 + AluJb SINE Alu 137 220 -92 2917 119 2 36 chr10 8611984 8612239 -136977049 + L1PB2 LINE L1 5721 5956 -195 2180 103 7 0 chr10 8612239 8612529 -136976759 + AluSq SINE Alu 1 292 -21 2917 119 2 36 chr10 8612529 8612718 -136976570 + L1PB2 LINE L1 5956 6150 -1 350 298 93 4 chr10 8612779 8612940 -136976348 + MIR SINE MIR 16 188 -74 679 303 85 43 chr10 8613119 8613662 -136975626 - MLT1L LTR MaLR -9 606 1 2220 112 0 20 chr10 8614152 8614457 -136974831 - AluSg SINE Alu -11 299 1 1936 166 3 0 chr10 8614488 8614790 -136974498 - AluSx SINE Alu -9 303 1 22 35 0 0 chr10 8614928 8614957 -136974331 + AT_rich Low_complexity Low_complexity 1 29 0 454 318 28 74 chr10 8615310 8615593 -136973695 + L3 LINE CR1 1307 1576 -1 357 75 0 0 chr10 8616514 8616567 -136972721 + (TA)n Simple_repeat Simple_repeat 1 53 0 2272 100 0 3 chr10 8616631 8616931 -136972357 + AluSg SINE Alu 2 300 -10 261 0 0 0 chr10 8617302 8617331 -136971957 + (CAAA)n Simple_repeat Simple_repeat 2 30 0 244 145 43 58 chr10 8617459 8617528 -136971760 - L1P3 LINE L1 -5949 512 445 1787 138 35 21 chr10 8621428 8621717 -136967571 + AluSx SINE Alu 1 293 -19 218 225 0 0 chr10 8622005 8622045 -136967243 + MIR SINE MIR 40 79 -129 267 299 63 67 chr10 8622223 8622477 -136966811 - L2 LINE L2 -341 2973 2721 566 135 101 0 chr10 8623064 8623185 -136966103 + AluJb SINE Alu 187 316 0 287 243 92 25 chr10 8623283 8623405 -136965883 - MIR SINE MIR -63 145 38 430 267 35 26 chr10 8623930 8624046 -136965242 + MIR SINE MIR 3 119 -143 428 282 18 9 chr10 8624101 8624211 -136965077 - L2 LINE L2 -10 3303 3193 994 181 5 29 chr10 8624372 8624576 -136964712 + Charlie5 DNA MER1_type 2 200 -2412 * 1085 193 59 15 chr10 8624562 8624832 -136964456 + Charlie5 DNA MER1_type 2343 2624 0 309 242 68 37 chr10 8625989 8626102 -136963186 - MIR SINE MIR -81 127 11 1380 179 33 22 chr10 8626176 8626500 -136962788 + AluJo SINE Alu 34 312 0 201 265 137 49 chr10 8627794 8627896 -136961392 + L2 LINE L2 3162 3272 0 1843 166 31 0 chr10 8628874 8629164 -136960124 + AluJb SINE Alu 5 303 -9 236 270 113 26 chr10 8630268 8630383 -136958905 + L2 LINE L2 3182 3306 -7 850 248 41 37 chr10 8632147 8632389 -136956899 + MIR SINE MIR 1 243 -19 277 223 136 10 chr10 8632509 8632612 -136956676 - MER103 DNA DNA -47 119 4 247 284 55 37 chr10 8633734 8633764 -136955524 + MIR3 SINE MIR 71 99 -109 1961 145 0 31 chr10 8633764 8634082 -136955206 - AluJo SINE Alu -4 308 1 247 284 55 37 chr10 8634082 8634160 -136955128 + MIR3 SINE MIR 99 181 -27 215 197 0 45 chr10 8635183 8635249 -136954039 + (TGAA)n Simple_repeat Simple_repeat 1 63 0 1737 158 7 34 chr10 8635370 8635668 -136953620 - AluJo SINE Alu -22 290 1 2128 113 13 10 chr10 8636159 8636468 -136952820 + AluSx SINE Alu 1 310 -2 819 153 8 0 chr10 8636546 8636677 -136952611 - FLAM_C SINE Alu 0 143 12 44 20 0 0 chr10 8636760 8636811 -136952477 + AT_rich Low_complexity Low_complexity 1 51 0 251 277 98 103 chr10 8636823 8637254 -136952034 - L2 LINE L2 -6 3307 2875 3925 142 89 8 chr10 8637254 8637908 -136951380 - MER39 LTR ERV1 0 707 1 251 277 98 103 chr10 8637908 8638059 -136951229 - L2 LINE L2 -438 2875 2725 1872 153 24 0 chr10 8638059 8638346 -136950942 + AluJb SINE Alu 1 294 -18 251 277 98 103 chr10 8638346 8638507 -136950781 - L2 LINE L2 -588 2725 2553 800 183 0 0 chr10 8638719 8638839 -136950449 - FLAM_C SINE Alu -22 121 2 497 302 108 29 chr10 8639523 8639867 -136949421 + MLT1J LTR MaLR 106 476 -35 1610 185 3 64 chr10 8640100 8640430 -136948858 + AluJb SINE Alu 1 310 -2 181 308 0 0 chr10 8640708 8640760 -136948528 - L2 LINE L2 0 3313 3262 846 165 0 0 chr10 8640954 8641087 -136948201 - FLAM_C SINE Alu 0 133 1 1846 129 20 0 chr10 8641154 8641447 -136947841 + AluSx SINE Alu 24 321 0 5031 94 12 0 chr10 8641763 8642415 -136946873 - L1PA10 LINE L1 -4 6164 5505 210 368 128 0 chr10 8642764 8642881 -136946407 - L2 LINE L2 -4 3268 3137 1654 171 50 4 chr10 8643717 8643997 -136945291 + AluJb SINE Alu 1 293 -19 632 241 97 5 chr10 8644622 8644817 -136944471 + L2 LINE L2 2132 2344 -970 186 43 0 0 chr10 8644818 8644841 -136944447 + (TTTA)n Simple_repeat Simple_repeat 2 24 0 826 197 58 21 chr10 8644845 8645033 -136944255 - AluJo SINE Alu -31 281 87 180 0 0 0 chr10 8645051 8645071 -136944217 + (TTTG)n Simple_repeat Simple_repeat 1 20 0 1802 164 4 0 chr10 8645084 8645359 -136943929 - AluSx SINE Alu -36 276 1 1987 130 10 3 chr10 8645836 8646129 -136943159 - AluSx SINE Alu -17 295 1 707 304 69 42 chr10 8646129 8646631 -136942657 - L2 LINE L2 -21 3292 2706 1040 93 2 7 chr10 8646631 8646777 -136942511 - L1P LINE L1 -1500 4646 4498 2134 89 4 0 chr10 8646777 8647047 -136942241 + L1PA7 LINE L1 5884 6154 0 564 279 105 39 chr10 8647068 8647154 -136942134 - L2 LINE L2 -613 2701 2622 628 239 123 7 chr10 8647154 8647309 -136941979 - MER96 DNA MER1_type -2 173 1 564 279 105 39 chr10 8647309 8647631 -136941657 - L2 LINE L2 -692 2622 2266 791 5 0 97 chr10 8647797 8647992 -136941296 + (TA)n Simple_repeat Simple_repeat 2 177 0 243 372 85 16 chr10 8648056 8648185 -136941103 - L2 LINE L2 -12 3260 3123 558 348 77 23 chr10 8648235 8648753 -136940535 - L2 LINE L2 -556 2758 2213 277 324 56 9 chr10 8648911 8649019 -136940269 + L2 LINE L2 3199 3311 -2 314 293 136 16 chr10 8649049 8649291 -136939997 - L2 LINE L2 -1292 2022 1752 185 250 0 94 chr10 8649500 8649564 -136939724 - L3 LINE CR1 -219 1358 1301 1609 135 27 30 chr10 8649870 8650167 -136939121 + AluJb SINE Alu 1 296 -16 312 27 0 0 chr10 8650785 8650822 -136938466 + (TG)n Simple_repeat Simple_repeat 2 38 0 228 35 0 0 chr10 8650821 8650850 -136938438 + (TA)n Simple_repeat Simple_repeat 1 29 0 * 296 306 42 119 chr10 8651488 8651890 -136937398 - L2 LINE L2 -4 3268 2898 2872 7 0 0 chr10 8651906 8652214 -136937074 - AluY SINE Alu -3 308 1 6727 94 10 3 chr10 8652222 8653457 -136935831 + L1PA12 LINE L1 4921 6161 -7 2554 52 7 0 chr10 8653858 8654163 -136935125 + AluY SINE Alu 1 307 -4 913 131 0 8 chr10 8654411 8654541 -136934747 + FLAM_C SINE Alu 1 129 -4 348 230 103 40 chr10 8655027 8655153 -136934135 + MIR SINE MIR 123 256 -6 1791 178 69 94 chr10 8655641 8655718 -136933570 - MLT1C LTR MaLR 0 467 390 1655 143 31 0 chr10 8655718 8655847 -136933441 - AluSx SINE Alu -46 266 142 423 0 0 0 chr10 8655847 8655894 -136933394 + (TTTA)n Simple_repeat Simple_repeat 2 48 0 1655 143 31 0 chr10 8655894 8656022 -136933266 - AluSx SINE Alu -170 142 1 1791 178 69 94 chr10 8656022 8656423 -136932865 - MLT1C LTR MaLR -77 390 1 347 246 25 49 chr10 8656657 8656779 -136932509 - L2 LINE L2 -15 3298 3180 597 128 0 86 chr10 8656821 8656850 -136932438 + MLT1B LTR MaLR 81 111 -279 1856 156 0 47 chr10 8656850 8657171 -136932117 + AluSx SINE Alu 1 306 -6 597 128 0 86 chr10 8657171 8657258 -136932030 + MLT1B LTR MaLR 111 187 -203 723 69 11 0 chr10 8657266 8657353 -136931935 + AluY SINE Alu 205 292 -19 980 188 15 10 chr10 8657370 8657567 -136931721 + MLT1B LTR MaLR 188 385 -5 370 216 98 10 chr10 8657571 8657673 -136931615 + MER58B DNA MER1_type 186 296 -45 2104 137 10 0 chr10 8657765 8658071 -136931217 - AluY SINE Alu -2 309 1 487 300 96 26 chr10 8658159 8658389 -136930899 - MIR SINE MIR -14 248 3 3719 153 13 38 chr10 8658465 8659145 -136930143 - L1MA9 LINE L1 -146 6166 5504 343 287 128 0 chr10 8659221 8659315 -136929973 - L2 LINE L2 -25 3288 3183 31 0 0 0 chr10 8659698 8659729 -136929559 + AT_rich Low_complexity Low_complexity 1 31 0 2101 116 13 16 chr10 8659744 8660054 -136929234 - L1PA14 LINE L1 -17 6144 5836 949 162 0 0 chr10 8660768 8660910 -136928378 - FRAM SINE Alu -15 161 20 30 59 0 0 chr10 8662330 8662381 -136926907 + AT_rich Low_complexity Low_complexity 1 51 0 219 69 0 0 chr10 8662387 8662416 -136926872 + (TCTA)n Simple_repeat Simple_repeat 2 30 0 1920 139 0 17 chr10 8662416 8662704 -136926584 - AluSx SINE Alu -23 289 7 432 0 0 0 chr10 8664433 8664481 -136924807 + (TAGA)n Simple_repeat Simple_repeat 3 50 0 200 83 0 28 chr10 8664481 8664517 -136924771 + (TA)n Simple_repeat Simple_repeat 2 36 0 21 36 0 0 chr10 8664888 8664916 -136924372 + AT_rich Low_complexity Low_complexity 1 28 0 256 296 12 12 chr10 8664974 8665055 -136924233 - MIR SINE MIR -71 137 57 207 0 0 0 chr10 8665058 8665081 -136924207 + (TTTG)n Simple_repeat Simple_repeat 2 24 0 1897 156 0 0 chr10 8665633 8665908 -136923380 + AluSx SINE Alu 1 275 -37 244 122 61 0 chr10 8666421 8666503 -136922785 + (TA)n Simple_repeat Simple_repeat 1 87 0 434 107 71 6 chr10 8666517 8666686 -136922602 + (TA)n Simple_repeat Simple_repeat 1 180 0 208 152 57 13 chr10 8666698 8666856 -136922432 + (TA)n Simple_repeat Simple_repeat 2 166 0 236 272 44 38 chr10 8666875 8667033 -136922255 + L1MC4 LINE L1 7719 7877 -165 220 296 0 0 chr10 8667040 8667094 -136922194 + (TATATG)n Simple_repeat Simple_repeat 2 55 0 913 119 0 0 chr10 8667314 8667456 -136921832 - FLAM_C SINE Alu 0 142 1 223 317 58 50 chr10 8667474 8667594 -136921694 - MIR SINE MIR -139 123 3 2015 152 141 8 chr10 8668676 8669052 -136920236 - MSTA LTR MaLR 0 428 3 222 279 108 31 chr10 8669194 8669323 -136919965 - L2 LINE L2 0 3313 3175 2091 241 156 142 chr10 8669397 8669547 -136919741 - L2 LINE L2 -8 3305 3159 2044 137 7 0 chr10 8669547 8669839 -136919449 + AluSx SINE Alu 8 301 -11 2091 241 156 142 chr10 8669839 8670589 -136918699 - L2 LINE L2 -154 3159 2422 1275 169 0 14 chr10 8670589 8670802 -136918486 + AluJo SINE Alu 1 210 -102 2091 241 156 142 chr10 8670802 8670821 -136918467 - L2 LINE L2 -891 2422 2405 221 0 35 0 chr10 8670821 8670850 -136918438 + (CAAAA)n Simple_repeat Simple_repeat 1 30 0 2091 241 156 142 chr10 8670850 8671536 -136917752 - L2 LINE L2 -908 2405 1731 2145 118 0 13 chr10 8671536 8671840 -136917448 - AluSx SINE Alu -12 300 1 2091 241 156 142 chr10 8671840 8672377 -136916911 - L2 LINE L2 -1582 1731 1203 2292 81 24 0 chr10 8672377 8672673 -136916615 - AluSp SINE Alu -10 303 1 1774 181 0 16 chr10 8672673 8672987 -136916301 - AluJo SINE Alu -3 309 1 2091 241 156 142 chr10 8672987 8673117 -136916171 - L2 LINE L2 -2109 1204 790 315 0 0 0 chr10 8675576 8675611 -136913677 + (CA)n Simple_repeat Simple_repeat 2 36 0 2311 101 0 3 chr10 8676813 8676835 -136912453 - AluY SINE Alu -4 307 286 210 105 0 0 chr10 8676835 8676873 -136912415 + (TTTAA)n Simple_repeat Simple_repeat 3 40 0 2311 101 0 3 chr10 8676873 8677158 -136912130 - AluY SINE Alu -25 286 1 1383 187 90 14 chr10 8677163 8677441 -136911847 - AluJb SINE Alu -13 299 1 204 40 0 0 chr10 8677742 8677767 -136911521 + (A)n Simple_repeat Simple_repeat 1 25 0 525 274 86 16 chr10 8678200 8678386 -136910902 - MIR SINE MIR -54 208 10 210 302 245 0 chr10 8679022 8679128 -136910160 - L2 LINE L2 -4 3268 3137 633 89 50 0 chr10 8679574 8679675 -136909613 + L1PA3 LINE L1 5909 6014 -141 343 122 0 0 chr10 8679776 8679825 -136909463 - L1PA13 LINE L1 -293 5870 5822 401 352 91 13 chr10 8680706 8680936 -136908352 - MIR SINE MIR -3 259 12 1990 138 0 0 chr10 8681204 8681479 -136907809 + AluSx SINE Alu 1 275 -37 207 0 0 0 chr10 8681484 8681507 -136907781 + (TAAA)n Simple_repeat Simple_repeat 1 23 0 829 172 0 0 chr10 8682028 8682150 -136907138 + FLAM_C SINE Alu 2 123 -20 227 227 39 16 chr10 8682790 8682918 -136906370 + (TA)n Simple_repeat Simple_repeat 2 132 0 1849 173 146 3 chr10 8683331 8683700 -136905588 + MSTB LTR MaLR 1 422 -4 416 213 71 39 chr10 8683734 8683861 -136905427 - MIR SINE MIR -120 142 12 1500 172 67 0 chr10 8684606 8684891 -136904397 - AluJo SINE Alu -8 304 1 198 281 73 135 chr10 8684896 8685184 -136904104 + L2 LINE L2 3001 3270 -2 354 98 0 0 chr10 8687390 8687441 -136901847 + (TTCC)n Simple_repeat Simple_repeat 2 52 0 1463 179 39 8 chr10 8687462 8687719 -136901569 - AluJo SINE Alu -47 265 1 240 122 0 0 chr10 8687754 8687795 -136901493 + (A)n Simple_repeat Simple_repeat 1 41 0 665 269 91 10 chr10 8688569 8688777 -136900511 + MIR SINE MIR 6 230 -32 831 155 54 7 chr10 8688900 8689048 -136900240 - AluJo/FRAM SINE Alu -2 310 156 519 120 0 0 chr10 8689048 8689123 -136900165 - AluJ/FLAM SINE Alu -233 69 3 2582 59 0 0 chr10 8690309 8690616 -136898672 - AluY SINE Alu -4 307 1 252 59 0 0 chr10 8690811 8690845 -136898443 + (CCAA)n Simple_repeat Simple_repeat 2 35 0 1950 167 0 3 chr10 8691787 8692098 -136897190 + AluSx SINE Alu 2 311 -1 1108 150 12 0 chr10 8692098 8692258 -136897030 + AluJb SINE Alu 135 296 -16 1635 194 36 72 chr10 8692999 8693031 -136896257 - MLT2C1 LTR ERVL -8 389 357 181 57 57 0 chr10 8693031 8693066 -136896222 + (TG)n Simple_repeat Simple_repeat 2 38 0 1635 194 36 72 chr10 8693066 8693098 -136896190 - MLT2C1 LTR ERVL -40 357 325 2000 117 47 7 chr10 8693098 8693396 -136895892 + AluSg SINE Alu 1 310 0 1635 194 36 72 chr10 8693396 8693721 -136895567 - MLT2C1 LTR ERVL -72 325 13 296 296 59 32 chr10 8695152 8695362 -136893926 + MIR SINE MIR 8 262 0 2206 121 3 3 chr10 8695709 8696016 -136893272 - AluSx SINE Alu -5 307 1 186 339 15 15 chr10 8696313 8696378 -136892910 - MIR3 SINE MIR -26 182 118 355 404 31 6 chr10 8696497 8696658 -136892630 + L2 LINE L2 3107 3271 -1 216 167 37 19 chr10 8698119 8698173 -136891115 + CT-rich Low_complexity Low_complexity 3 57 0 1604 182 7 39 chr10 8698569 8698876 -136890412 - AluJb SINE Alu -15 297 1 187 224 0 61 chr10 8699889 8699938 -136889350 - L2 LINE L2 0 3272 3227 21 36 0 0 chr10 8701935 8701963 -136887325 + AT_rich Low_complexity Low_complexity 1 28 0 191 236 125 14 chr10 8702955 8703027 -136886261 + MIR SINE MIR 84 164 -44 191 289 19 0 chr10 8703231 8703283 -136886005 - L2 LINE L2 -2 3270 3218 214 353 106 0 chr10 8703405 8703490 -136885798 - L2 LINE L2 -40 3232 3139 241 252 160 8 chr10 8703530 8703649 -136885639 + L2 LINE L2 1181 1317 -1997 2165 102 10 0 chr10 8703650 8703945 -136885343 - AluSc SINE Alu -10 299 2 2202 129 11 33 chr10 8704427 8704791 -136884497 + L1PA14 LINE L1 5797 6152 -9 322 263 188 15 chr10 8705223 8705356 -136883932 + MER5B DNA MER1_type 21 176 -2 407 278 15 60 chr10 8705369 8705502 -136883786 - MER5B DNA MER1_type 0 178 52 781 286 45 11 chr10 8705696 8705983 -136883305 + AluJo SINE Alu 1 297 -5 840 144 0 0 chr10 8706323 8706441 -136882847 + FLAM_C SINE Alu 1 118 -25 22 36 0 55 chr10 8706447 8706467 -136882821 + AT_rich Low_complexity Low_complexity 1 21 -31 3830 95 10 0 chr10 8706467 8706961 -136882327 + L1PA10 LINE L1 5665 6163 -5 22 36 0 55 chr10 8706961 8706995 -136882293 + AT_rich Low_complexity Low_complexity 21 52 0 2234 113 10 3 chr10 8707983 8708293 -136880995 - AluSx SINE Alu 0 312 1 331 336 195 34 chr10 8708541 8708764 -136880524 + L3 LINE CR1 1099 1285 -292 1742 161 27 7 chr10 8708764 8709056 -136880232 + AluJo SINE Alu 1 298 -14 331 336 195 34 chr10 8709056 8709243 -136880045 + L3 LINE CR1 1285 1575 -2 516 106 47 35 chr10 8709818 8709903 -136879385 + FRAM SINE Alu 30 115 -61 484 66 11 66 chr10 8710237 8710328 -136878960 - L1PA13 LINE L1 0 6163 6078 1530 57 38 5 chr10 8710334 8710543 -136878745 - L1PA12 LINE L1 -49 6119 5904 2291 85 0 3 chr10 8710547 8710842 -136878446 - AluSx SINE Alu -18 294 1 216 0 0 0 chr10 8710910 8710934 -136878354 + (A)n Simple_repeat Simple_repeat 1 24 0 211 232 101 29 chr10 8711370 8711439 -136877849 + MIR SINE MIR 117 190 -72 1693 160 3 10 chr10 8711512 8711805 -136877483 - AluJo SINE Alu -13 299 9 198 0 0 0 chr10 8711846 8711868 -136877420 + (T)n Simple_repeat Simple_repeat 1 22 0 849 92 0 0 chr10 8711955 8712075 -136877213 + (TTAGGG)n Simple_repeat Simple_repeat 6 125 0 1297 68 6 28 chr10 8712360 8712536 -136876752 - L1PA4 LINE L1 -1 6154 5983 1924 133 31 3 chr10 8712559 8712853 -136876435 - AluSx SINE Alu -10 302 1 268 343 84 24 chr10 8713005 8713171 -136876117 - MIR SINE MIR -2 260 85 220 351 82 62 chr10 8713199 8713504 -136875784 - L2 LINE L2 -11 3261 2951 2054 96 64 0 chr10 8714530 8714812 -136874476 - AluSq SINE Alu -13 300 1 23 54 0 0 chr10 8716385 8716422 -136872866 + AT_rich Low_complexity Low_complexity 1 37 0 217 231 79 4 chr10 8716805 8716876 -136872412 + MIR SINE MIR 77 151 -57 305 371 59 27 chr10 8716927 8717148 -136872140 + MIR SINE MIR 32 259 -3 748 294 5 23 chr10 8717221 8717439 -136871849 - MIR SINE MIR -21 241 28 1704 153 7 27 chr10 8717447 8717741 -136871547 - AluJo SINE Alu -20 292 5 252 178 76 119 chr10 8717892 8718010 -136871278 + MER103 DNA DNA 8 120 -46 528 136 0 0 chr10 8718071 8718159 -136871129 + (TTCC)n Simple_repeat Simple_repeat 1 88 0 373 318 71 26 chr10 8720340 8720494 -136868794 - MIR3 SINE MIR -46 162 2 2299 114 0 0 chr10 8720715 8721023 -136868265 + AluSg SINE Alu 1 308 -2 243 88 0 0 chr10 8721540 8721574 -136867714 + (A)n Simple_repeat Simple_repeat 1 34 0 797 262 91 92 chr10 8722021 8722143 -136867145 - L2 LINE L2 -165 3148 3027 2266 92 3 10 chr10 8722143 8722448 -136866840 + AluSp SINE Alu 1 303 -10 797 262 91 92 chr10 8722448 8722982 -136866306 - L2 LINE L2 -286 3027 2502 1713 182 129 29 chr10 8722983 8723023 -136866265 - MER47B DNA MER2_type -1905 418 383 2738 131 13 0 chr10 8723023 8723421 -136865867 + MER57A LTR ERV1 1 403 0 1713 182 129 29 chr10 8723421 8723760 -136865528 - MER47B DNA MER2_type -1940 383 1 265 197 0 16 chr10 8723798 8723859 -136865429 + L1MA4 LINE L1 6230 6289 -11 201 108 0 0 chr10 8723867 8723878 -136865410 + (TTAA)n Simple_repeat Simple_repeat 2 12 -26 1861 161 0 20 chr10 8723878 8724182 -136865106 - AluJb SINE Alu -14 298 1 201 108 0 0 chr10 8724182 8724193 -136865095 + (TTAA)n Simple_repeat Simple_repeat 12 22 -16 2423 62 3 0 chr10 8724193 8724485 -136864803 - AluY SINE Alu -13 298 6 201 108 0 0 chr10 8724485 8724498 -136864790 + (TTAA)n Simple_repeat Simple_repeat 21 38 0 1622 232 139 24 chr10 8724508 8725042 -136864246 - L2 LINE L2 -842 2472 1878 987 201 7 97 chr10 8725079 8725358 -136863930 - L1MB8 LINE L1 0 6178 5925 2509 160 17 0 chr10 8725359 8725777 -136863511 - L1MA6 LINE L1 -237 6063 5639 372 285 16 24 chr10 8725777 8725900 -136863388 - L2 LINE L2 -1431 1883 1762 2683 108 19 11 chr10 8726648 8727020 -136862268 + THE1C LTR MaLR 1 375 0 21 0 0 0 chr10 8727487 8727508 -136861780 + AT_rich Low_complexity Low_complexity 1 21 0 2689 29 0 16 chr10 8728100 8728415 -136860873 - AluY SINE Alu -1 310 1 907 176 152 10 chr10 8728880 8729084 -136860204 + ORSL DNA AcHobo 19 251 -24 2198 123 0 7 chr10 8729259 8729606 -136859682 - AluSg SINE Alu 0 345 1 1414 84 0 1 chr10 8729811 8729828 -136859460 + L1PA8 LINE L1 5792 5808 -364 1339 76 32 32 chr10 8729828 8730013 -136859275 - L1PA8 LINE L1 -4 6168 5984 1414 84 0 1 chr10 8730013 8730191 -136859097 + L1PA8 LINE L1 5808 5985 -187 1022 185 0 6 chr10 8730877 8731050 -136858238 - AluJo SINE Alu -130 182 11 2264 89 0 3 chr10 8731227 8731520 -136857768 - AluSc SINE Alu -17 292 1 1914 136 43 13 chr10 8731805 8732106 -136857182 - AluSx SINE Alu -2 310 1 315 339 26 52 chr10 8732163 8732278 -136857010 + MIR SINE MIR 34 145 -63 29 28 0 0 chr10 8732719 8732755 -136856533 + AT_rich Low_complexity Low_complexity 1 36 0 201 239 22 0 chr10 8732773 8732819 -136856469 - MIR SINE MIR -10 252 206 444 340 42 37 chr10 8733027 8733371 -136855917 - L1MC/D LINE L1 -571 5591 5268 823 171 0 0 chr10 8733407 8733524 -136855764 + FLAM_C SINE Alu 2 118 -25 387 0 0 0 chr10 8733527 8733570 -136855718 + (TTA)n Simple_repeat Simple_repeat 2 44 0 600 262 131 9 chr10 8734099 8734328 -136854960 - L1ME LINE L1 -335 5786 5530 458 338 33 14 chr10 8734714 8734924 -136854364 - MIR SINE MIR -1 261 48 181 284 47 88 chr10 8735061 8735209 -136854079 - L2 LINE L2 -829 2485 2344 856 157 8 0 chr10 8735279 8735413 -136853875 + AluJo SINE Alu 1 135 -177 36 77 0 0 chr10 8735430 8735508 -136853780 + AT_rich Low_complexity Low_complexity 1 78 0 222 364 13 0 chr10 8735987 8736064 -136853224 - L2 LINE L2 -1007 2307 2230 1238 268 66 70 chr10 8736107 8736682 -136852606 + MLT1G LTR MaLR 7 579 -11 1421 193 0 53 chr10 8737145 8737446 -136851842 + AluJo SINE Alu 3 287 -25 249 108 0 0 chr10 8737446 8737483 -136851805 + (GGGGA)n Simple_repeat Simple_repeat 2 38 0 532 163 41 0 chr10 8737547 8737645 -136851643 + MLT1G LTR MaLR 489 590 0 2158 235 74 10 chr10 8737791 8738510 -136850778 - L1ME1 LINE L1 -281 5885 5119 248 259 42 105 chr10 8738517 8738660 -136850628 + L1ME1 LINE L1 5998 6131 -35 2172 78 18 4 chr10 8739379 8739689 -136849599 - AluSq SINE Alu 0 315 2 253 75 38 19 chr10 8739728 8739781 -136849507 + T-rich Low_complexity Low_complexity 2 55 0 551 281 7 0 chr10 8740227 8740380 -136848908 - L1MC/D LINE L1 -923 5223 5070 1833 154 3 7 chr10 8740573 8740886 -136848402 - AluSx SINE Alu 0 312 1 2059 141 7 0 chr10 8741207 8741511 -136847777 + AluSq SINE Alu 1 306 -7 267 103 0 0 chr10 8741532 8741571 -136847717 + (GGGA)n Simple_repeat Simple_repeat 2 40 0 433 218 171 47 chr10 8742271 8742441 -136846847 + MIR SINE MIR 42 232 -30 230 252 107 38 chr10 8742522 8742653 -136846635 + L1ME4a LINE L1 5965 6104 -17 316 297 86 40 chr10 8742686 8743083 -136846205 + L1ME4a LINE L1 5682 6096 -25 1901 143 0 7 chr10 8743132 8743412 -136845876 + AluSx SINE Alu 16 293 -19 2400 124 19 8 chr10 8744145 8744508 -136844780 + L1MA1 LINE L1 5936 6302 0 1663 188 0 7 chr10 8744525 8744850 -136844438 + AluJb SINE Alu 1 323 0 263 323 21 4 chr10 8745039 8745168 -136844120 + MIR SINE MIR 14 147 -61 186 143 0 0 chr10 8748824 8748859 -136840429 + (TTTTC)n Simple_repeat Simple_repeat 2 36 0 3289 168 42 5 chr10 8749106 8749672 -136839616 + L1PA16 LINE L1 5576 6162 -4 323 287 130 0 chr10 8752010 8752118 -136837170 + L2 LINE L2 3192 3313 0 2222 107 0 3 chr10 8753074 8753365 -136835923 - AluSc SINE Alu -19 290 1 2531 151 9 24 chr10 8753468 8753893 -136835395 - MSTA LTR MaLR -9 419 1 198 294 20 0 chr10 8755881 8755932 -136833356 + MIR SINE MIR 93 144 -64 553 263 22 62 chr10 8755946 8756125 -136833163 - MER5B DNA MER1_type -6 172 1 728 225 144 148 chr10 8757022 8757529 -136831759 + MLT1D LTR MaLR 1 505 0 1747 156 16 41 chr10 8757703 8758023 -136831265 - AluJb SINE Alu 0 312 1 1317 163 8 145 chr10 8758902 8759302 -136829986 - MLT1B LTR MaLR -3 387 43 191 367 0 22 chr10 8760203 8760293 -136828995 + MIR SINE MIR 25 112 -96 2613 82 13 16 chr10 8760369 8760745 -136828543 - THE1C LTR MaLR 0 375 1 25 0 0 0 chr10 8762086 8762111 -136827177 + AT_rich Low_complexity Low_complexity 1 25 0 1142 211 0 31 chr10 8762142 8762369 -136826919 - AluJo SINE Alu -92 220 1 23 0 0 0 chr10 8762908 8762931 -136826357 + AT_rich Low_complexity Low_complexity 1 23 0 699 202 93 0 chr10 8763506 8763635 -136825653 + FAM SINE Alu 18 158 -27 993 104 6 12 chr10 8763635 8763808 -136825480 + (GAAA)n Simple_repeat Simple_repeat 1 172 0 314 154 0 15 chr10 8763838 8763903 -136825385 + GA-rich Low_complexity Low_complexity 1 64 0 1836 115 83 0 chr10 8764319 8764597 -136824691 - AluSx SINE Alu -10 302 2 320 338 50 14 chr10 8764666 8764805 -136824483 - L2 LINE L2 -5 3308 3165 249 245 337 0 chr10 8764904 8765002 -136824286 + L2 LINE L2 3182 3312 -1 298 322 152 23 chr10 8765026 8765374 -136823914 - L2 LINE L2 -56 3257 2865 1254 158 0 19 chr10 8765597 8765806 -136823482 + AluJo SINE Alu 86 290 -22 1830 164 65 14 chr10 8766245 8766616 -136822672 + MLT1B LTR MaLR 1 390 0 1840 125 0 4 chr10 8766840 8767096 -136822192 + AluSx SINE Alu 1 255 -57 234 0 0 0 chr10 8767145 8767171 -136822117 + (TGAA)n Simple_repeat Simple_repeat 3 28 0 2187 98 0 0 chr10 8767291 8767625 -136821663 + AluSq SINE Alu 1 334 0 483 200 56 0 chr10 8767983 8768073 -136821215 + FRAM SINE Alu 39 133 -43 1562 189 17 14 chr10 8768405 8768701 -136820587 - AluJo SINE Alu -15 297 1 200 135 0 27 chr10 8769591 8769628 -136819660 + (TTG)n Simple_repeat Simple_repeat 1 36 0 2225 109 0 3 chr10 8769938 8770232 -136819056 + AluSc SINE Alu 1 293 -16 329 287 130 0 chr10 8771188 8771296 -136817992 - L2 LINE L2 0 3313 3192 3035 166 42 5 chr10 8773634 8774200 -136815088 - L1PA16 LINE L1 -4 6162 5576 227 182 0 0 chr10 8774440 8774484 -136814804 + A-rich Low_complexity Low_complexity 3 46 0 1875 167 0 13 chr10 8776659 8776959 -136812329 + AluJo SINE Alu 1 296 -16 22 35 0 0 chr10 8777080 8777109 -136812179 + AT_rich Low_complexity Low_complexity 1 29 0 1984 181 37 5 chr10 8777159 8777589 -136811699 - L1MA9 LINE L1 -36 6276 5833 694 275 65 63 chr10 8777589 8778047 -136811241 - MLT1J LTR MaLR -4 507 49 759 280 27 43 chr10 8778281 8778538 -136810750 - MIR SINE MIR 0 262 11 624 252 8 0 chr10 8779135 8779262 -136810026 + MIR SINE MIR 5 132 -130 1961 131 57 35 chr10 8779291 8779658 -136809630 - THE1C LTR MaLR 0 375 1 468 300 81 25 chr10 8779729 8779889 -136809399 - MIR SINE MIR -74 188 20 283 363 67 0 chr10 8781499 8781634 -136807654 - MIR SINE MIR -109 153 10 233 410 8 0 chr10 8783249 8783371 -136805917 + L2 LINE L2 2866 2988 -284 266 73 24 0 chr10 8783388 8783429 -136805859 + (TTCC)n Simple_repeat Simple_repeat 2 43 0 1799 169 51 0 chr10 8783450 8783803 -136805485 - AluJb SINE Alu 0 312 113 369 0 0 0 chr10 8783803 8783844 -136805444 + (TTTAA)n Simple_repeat Simple_repeat 3 43 0 1799 169 51 0 chr10 8783844 8783964 -136805324 - AluJb SINE Alu -199 113 1 1890 197 135 11 chr10 8784746 8784973 -136804315 - MLT2B1 LTR ERVL -12 508 311 504 0 0 0 chr10 8784973 8785029 -136804259 + (GA)n Simple_repeat Simple_repeat 1 56 0 1890 197 135 11 chr10 8785029 8785253 -136804035 - MLT2B1 LTR ERVL -209 311 1 27 0 0 0 chr10 8785286 8785313 -136803975 + AT_rich Low_complexity Low_complexity 1 27 0 205 313 15 0 chr10 8785421 8785488 -136803800 + L2 LINE L2 3202 3269 -3 5337 260 95 19 chr10 8785510 8786561 -136802727 - L1MEc LINE L1 -3613 2602 1632 264 30 0 0 chr10 8786561 8786594 -136802694 + (TTTTG)n Simple_repeat Simple_repeat 2 34 0 5337 260 95 19 chr10 8786594 8787967 -136801321 - L1MEc LINE L1 -4583 1632 47 446 274 113 21 chr10 8789693 8789879 -136799409 + MIR SINE MIR 59 261 -1 231 391 115 0 chr10 8790077 8790269 -136799019 + L3b LINE CR1 1350 1563 -20 1683 180 32 42 chr10 8790529 8790907 -136798381 - MLT1A2 LTR MaLR 0 374 1 1975 119 96 94 chr10 8791083 8791510 -136797778 - MSTA LTR MaLR 0 428 1 797 243 29 9 chr10 8793762 8793972 -136795316 - MER58A DNA MER1_type -8 216 3 424 214 97 62 chr10 8795181 8795326 -136793962 + MIR SINE MIR 99 248 -14 450 79 0 0 chr10 8795755 8795818 -136793470 + (CA)n Simple_repeat Simple_repeat 2 64 0 533 295 23 29 chr10 8797422 8797595 -136791693 - MIR3 SINE MIR -7 201 30 2179 96 19 29 chr10 8797750 8798064 -136791224 - AluY SINE Alu 0 311 1 23 0 0 0 chr10 8798396 8798419 -136790869 + AT_rich Low_complexity Low_complexity 1 23 0 223 320 87 0 chr10 8798864 8798967 -136790321 - MIR SINE MIR -46 216 105 1012 249 119 21 chr10 8799191 8799660 -136789628 - L1ME1 LINE L1 -8 6158 5644 278 273 11 68 chr10 8799878 8799966 -136789322 - L2 LINE L2 -1 3271 3189 198 0 0 0 chr10 8800069 8800091 -136789197 + (TG)n Simple_repeat Simple_repeat 1 22 0 * 543 16 0 0 chr10 8800090 8800154 -136789134 + (GA)n Simple_repeat Simple_repeat 1 64 0 299 130 19 0 chr10 8800884 8800938 -136788350 + (TA)n Simple_repeat Simple_repeat 1 55 0 324 233 11 22 chr10 8800946 8801036 -136788252 + L1MC4 LINE L1 6614 6702 -1340 260 266 11 21 chr10 8801039 8801133 -136788155 + (TA)n Simple_repeat Simple_repeat 1 93 0 526 148 16 23 chr10 8801144 8801272 -136788016 + (CATATA)n Simple_repeat Simple_repeat 2 128 0 183 264 0 57 chr10 8801934 8801987 -136787301 + MIR SINE MIR 205 254 -8 455 276 56 60 chr10 8802595 8802680 -136786608 - MIR SINE MIR 0 262 178 1801 159 48 40 chr10 8802680 8803052 -136786236 - THE1C LTR MaLR 0 375 1 455 276 56 60 chr10 8803052 8803198 -136786090 - MIR SINE MIR -84 178 32 651 230 63 0 chr10 8803332 8803506 -136785782 + MER58B DNA MER1_type 1 185 -156 639 255 31 0 chr10 8803578 8803739 -136785549 + MER58B DNA MER1_type 176 341 0 561 91 0 0 chr10 8803778 8803855 -136785433 - AluSc SINE Alu -180 129 53 772 252 55 18 chr10 8803954 8804172 -136785116 + MIR SINE MIR 32 257 -5 1655 128 45 0 chr10 8804608 8804851 -136784437 - AluSc SINE Alu -3 306 53 189 171 0 0 chr10 8804963 8804998 -136784290 + G-rich Low_complexity Low_complexity 1 35 0 1715 174 31 0 chr10 8805114 8805408 -136783880 + AluJo SINE Alu 1 303 -9 567 296 6 23 chr10 8805853 8806025 -136783263 + MIR SINE MIR 48 216 -46 322 353 92 0 chr10 8806111 8806264 -136783024 - MIR SINE MIR -72 190 24 2211 103 23 10 chr10 8807466 8807767 -136781521 - AluSq SINE Alu -8 305 1 400 345 78 14 chr10 8808026 8808307 -136780981 - L1ME4a LINE L1 -265 5856 5558 207 100 0 0 chr10 8808356 8808386 -136780902 + (GAAAA)n Simple_repeat Simple_repeat 2 31 0 1605 157 27 27 chr10 8808534 8808828 -136780460 - AluJo SINE Alu -18 294 1 2015 135 0 0 chr10 8808874 8809155 -136780133 + AluSx SINE Alu 1 281 -31 243 0 0 0 chr10 8809159 8809186 -136780102 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 578 312 113 0 chr10 8809214 8809435 -136779853 - MIR SINE MIR 0 262 17 1039 242 107 0 chr10 8809463 8809807 -136779481 - L1MB7 LINE L1 0 6184 5790 22 35 0 0 chr10 8810485 8810514 -136778774 + AT_rich Low_complexity Low_complexity 1 29 0 387 0 0 0 chr10 8810538 8810581 -136778707 + (CA)n Simple_repeat Simple_repeat 2 44 0 2086 117 0 26 chr10 8811894 8812201 -136777087 - AluSx SINE Alu -12 300 2 463 300 78 120 chr10 8812641 8813080 -136776208 - L2 LINE L2 -549 2765 2354 1485 192 8 0 chr10 8813080 8813340 -136775948 - AluJb SINE Alu -8 304 43 463 300 78 120 chr10 8813340 8813466 -136775822 - L2 LINE L2 -960 2354 2224 482 238 12 93 chr10 8813955 8814127 -136775161 - MIR SINE MIR -49 213 56 2139 133 0 22 chr10 8814796 8815113 -136774175 - AluSx SINE Alu -2 310 1 227 264 19 0 chr10 8816624 8816677 -136772611 - Charlie8 DNA MER1_type -2363 54 1 398 300 53 35 chr10 8817488 8817715 -136771573 + MLT1L LTR MaLR 368 598 -17 426 304 21 42 chr10 8817854 8818045 -136771243 + MIR SINE MIR 36 222 -40 273 156 39 0 chr10 8818063 8818140 -136771148 + (TA)n Simple_repeat Simple_repeat 1 80 0 2251 87 0 10 chr10 8818140 8818429 -136770859 - AluY SINE Alu -25 286 1 426 305 35 17 chr10 8818497 8818671 -136770617 - MIR SINE MIR -77 185 9 380 303 72 31 chr10 8818760 8818958 -136770330 - MIR SINE MIR -18 244 45 213 321 0 0 chr10 8819929 8819982 -136769306 - MIR3 SINE MIR -42 166 114 631 293 64 48 chr10 8819987 8820236 -136769052 - MIR SINE MIR 0 262 10 230 0 33 0 chr10 8820374 8820404 -136768884 + (CA)n Simple_repeat Simple_repeat 2 32 0 1215 128 159 23 chr10 8820948 8821205 -136768083 + L1MC1 LINE L1 5322 5613 -720 686 111 157 0 chr10 8821206 8821314 -136767974 - FLAM_C SINE Alu -18 125 1 1626 184 3 14 chr10 8821322 8821616 -136767672 - AluJo SINE Alu 0 312 22 4040 154 33 0 chr10 8821617 8822323 -136766965 + L1MC1 LINE L1 5605 6333 0 206 374 0 0 chr10 8822539 8822630 -136766658 + (TATATG)n Simple_repeat Simple_repeat 4 94 0 300 359 49 0 chr10 8823499 8823641 -136765647 - MIR SINE MIR 0 262 114 2350 113 0 0 chr10 8823693 8824003 -136765285 - AluSx SINE Alu -2 310 1 615 335 35 19 chr10 8824188 8824445 -136764843 + MIR SINE MIR 2 262 0 350 115 16 0 chr10 8825017 8825078 -136764210 + (TTCC)n Simple_repeat Simple_repeat 2 63 0 1112 82 6 22 chr10 8825092 8825274 -136764014 + (TTTC)n Simple_repeat Simple_repeat 2 180 0 326 286 22 0 chr10 8825282 8825373 -136763915 + CT-rich Low_complexity Low_complexity 3 95 0 213 288 17 0 chr10 8827487 8827546 -136761742 + MIR3 SINE MIR 106 165 -43 2282 119 0 0 chr10 8828393 8828686 -136760602 + AluSx SINE Alu 3 295 -17 21 0 0 0 chr10 8829122 8829143 -136760145 + AT_rich Low_complexity Low_complexity 1 21 0 24 53 0 0 chr10 8830787 8830825 -136758463 + AT_rich Low_complexity Low_complexity 1 38 0 33 43 0 0 chr10 8831003 8831050 -136758238 + AT_rich Low_complexity Low_complexity 1 47 0 195 184 0 0 chr10 8833536 8833574 -136755714 + (CA)n Simple_repeat Simple_repeat 1 38 0 212 374 65 9 chr10 8834575 8834682 -136754606 - MIR SINE MIR -103 159 47 1832 197 35 12 chr10 8835371 8835755 -136753533 - MER45B DNA AcHobo -541 1040 667 198 0 0 0 chr10 8835755 8835777 -136753511 + (TA)n Simple_repeat Simple_repeat 2 23 0 2241 70 0 0 chr10 8835777 8836047 -136753241 - AluSg SINE Alu -17 293 24 1832 197 35 12 chr10 8836047 8836083 -136753205 - MER45B DNA AcHobo -913 668 609 1108 264 71 10 chr10 8836079 8836390 -136752898 - MER45B DNA AcHobo -710 330 1 * 2148 100 0 7 chr10 8836675 8836954 -136752334 + AluSq SINE Alu 1 277 -36 375 23 0 0 chr10 8836955 8836999 -136752289 + (TAA)n Simple_repeat Simple_repeat 1 44 0 1984 158 0 0 chr10 8837014 8837318 -136751970 + AluJb SINE Alu 9 312 0 484 263 0 8 chr10 8837772 8837890 -136751398 - MIR SINE MIR -10 252 136 336 222 111 46 chr10 8837887 8837970 -136751318 + MIR SINE MIR 18 111 -151 * 2594 107 3 8 chr10 8837970 8838336 -136750952 - THE1B LTR MaLR 0 364 1 336 222 111 46 chr10 8838336 8838360 -136750928 + MIR SINE MIR 111 132 -130 22 0 0 0 chr10 8838750 8838772 -136750516 + AT_rich Low_complexity Low_complexity 1 22 0 198 361 165 0 chr10 8838778 8838875 -136750413 + MIR SINE MIR 33 145 -63 1042 159 107 83 chr10 8839544 8839871 -136749417 + MSTB1 LTR MaLR 3 337 -95 373 41 0 0 chr10 8839871 8839920 -136749368 - MADE1 DNA Mariner 0 80 32 25 0 0 0 chr10 8840006 8840031 -136749257 + AT_rich Low_complexity Low_complexity 1 25 0 2372 78 0 29 chr10 8840035 8840342 -136748946 + AluSx SINE Alu 1 298 -14 803 366 62 14 chr10 8840992 8841429 -136747859 - L3 LINE CR1 -967 610 153 466 282 38 132 chr10 8841633 8842027 -136747261 - L2 LINE L2 -54 3218 2862 344 264 99 19 chr10 8843504 8843825 -136745463 + L1M4c LINE L1 1370 1882 -4621 1830 289 52 25 chr10 8844160 8845182 -136744106 + L1ME3A LINE L1 1114 2163 -4233 1529 191 66 3 chr10 8845182 8845470 -136743818 + AluJo SINE Alu 1 306 -6 1205 125 0 17 chr10 8845470 8845646 -136743642 + AluSg/x SINE Alu 132 304 -6 2157 266 43 55 chr10 8845648 8847129 -136742159 + L1ME3A LINE L1 2152 3574 -2641 557 253 43 6 chr10 8847128 8847290 -136741998 + L1ME3A LINE L1 4074 4241 -1974 * 456 171 178 79 chr10 8847332 8847484 -136741804 - MLT1B LTR MaLR -223 167 1 21 0 0 0 chr10 8847528 8847549 -136741739 + AT_rich Low_complexity Low_complexity 1 21 0 4473 59 2 0 chr10 8847559 8848118 -136741170 + L1PA7 LINE L1 5591 6150 -4 2653 216 36 43 chr10 8848121 8848425 -136740863 + L1ME1 LINE L1 5189 5493 -673 1301 192 123 18 chr10 8848425 8848701 -136740587 + AluJb SINE Alu 1 305 -7 2653 216 36 43 chr10 8848701 8849336 -136739952 + L1ME1 LINE L1 5493 6122 -44 373 283 92 6 chr10 8849432 8849605 -136739683 + L1ME3A LINE L1 4401 4588 -1627 276 91 0 0 chr10 8849658 8849702 -136739586 + (TG)n Simple_repeat Simple_repeat 1 44 0 776 270 97 58 chr10 8849769 8849863 -136739425 + L1ME3A LINE L1 4765 4854 -1385 2535 108 5 24 chr10 8849863 8850232 -136739056 - THE1B LTR MaLR 0 364 3 776 270 97 58 chr10 8850232 8851338 -136737950 + L1ME3A LINE L1 4854 6018 -221 234 0 0 0 chr10 8851608 8851634 -136737654 + (T)n Simple_repeat Simple_repeat 1 26 0 237 329 120 19 chr10 8852105 8852263 -136737025 + MIR SINE MIR 28 201 -61 2288 118 0 0 chr10 8853717 8854021 -136735267 - AluSg SINE Alu -6 304 1 848 148 8 0 chr10 8854039 8854161 -136735127 - FLAM_C SINE Alu -19 124 2 470 291 114 29 chr10 8855767 8855977 -136733311 - MIR SINE MIR -13 249 22 531 339 15 0 chr10 8856814 8857009 -136732279 + MIR SINE MIR 63 260 -2 222 160 20 20 chr10 8857265 8857315 -136731973 + GA-rich Low_complexity Low_complexity 2 51 0 180 261 22 0 chr10 8860543 8860589 -136728699 + L2 LINE L2 3263 3309 -4 * 267 305 23 69 chr10 8860582 8860713 -136728575 - MIR SINE MIR -73 189 65 2225 105 7 0 chr10 8862018 8862313 -136726975 - AluSx SINE Alu -15 297 1 414 325 48 48 chr10 8862372 8862560 -136726728 - MER5A DNA MER1_type -1 188 1 28 48 0 0 chr10 8864240 8864282 -136725006 + AT_rich Low_complexity Low_complexity 1 42 0 2077 124 0 0 chr10 8864284 8864591 -136724697 + AluSx SINE Alu 1 307 0 354 296 21 21 chr10 8864591 8864733 -136724555 + MIR SINE MIR 121 262 0 747 250 44 44 chr10 8865326 8865574 -136723714 + MIR SINE MIR 14 261 -1 2233 124 0 0 chr10 8865782 8866088 -136723200 - AluSx SINE Alu -6 306 1 489 34 0 0 chr10 8866648 8866707 -136722581 + (TTTC)n Simple_repeat Simple_repeat 3 61 0 2220 113 7 0 chr10 8867334 8867662 -136721626 - AluSc SINE Alu 0 336 7 1319 160 48 72 chr10 8867825 8868073 -136721215 + MER33 DNA MER1_type 2 242 -2343 3539 87 16 0 chr10 8868073 8868565 -136720723 - L1PA8 LINE L1 -13 6159 5660 1319 160 48 72 chr10 8868565 8868647 -136720641 + MER33 DNA MER1_type 242 324 0 217 154 26 0 chr10 8869007 8869046 -136720242 + GA-rich Low_complexity Low_complexity 1 40 0 29 0 0 0 chr10 8869234 8869263 -136720025 + AT_rich Low_complexity Low_complexity 1 29 0 2129 142 0 0 chr10 8869263 8869558 -136719730 + AluSg SINE Alu 1 295 -15 732 200 0 0 chr10 8869572 8869692 -136719596 - FLAM_C SINE Alu -23 120 1 22 0 0 0 chr10 8870716 8870738 -136718550 + AT_rich Low_complexity Low_complexity 1 22 0 260 331 65 48 chr10 8871205 8871329 -136717959 + MIR SINE MIR 20 145 -63 197 372 141 26 chr10 8871416 8871983 -136717305 - L2 LINE L2 -411 2903 2272 3192 173 28 11 chr10 8872075 8872721 -136716567 + L1MB8 LINE L1 5520 6176 -2 234 282 48 24 chr10 8872809 8872933 -136716355 + L1MEd LINE L1 2 128 -5991 720 307 115 38 chr10 8873052 8873573 -136715715 + L1MEd LINE L1 260 820 -5299 493 290 12 35 chr10 8873838 8874007 -136715281 + MIR SINE MIR 20 184 -78 341 316 95 6 chr10 8874118 8874276 -136715012 + LTR16A LTR ERVL 111 282 -168 1029 161 71 14 chr10 8875921 8876132 -136713156 + AluJb SINE Alu 90 312 0 232 271 43 0 chr10 8876864 8876934 -136712354 - MIR SINE MIR -188 74 2 632 263 75 42 chr10 8877002 8877215 -136712073 - MIR SINE MIR -33 229 10 186 304 0 0 chr10 8877234 8877280 -136712008 - L3 LINE CR1 -12 1565 1520 228 355 0 11 chr10 8877281 8877374 -136711914 - MIR SINE MIR -118 144 53 1746 148 4 11 chr10 8877593 8877870 -136711418 + AluSx SINE Alu 1 275 -37 1117 56 25 0 chr10 8877875 8878035 -136711253 + (GAAA)n Simple_repeat Simple_repeat 2 165 0 267 103 0 0 chr10 8878035 8878074 -136711214 + (CAGG)n Simple_repeat Simple_repeat 1 39 0 198 299 51 43 chr10 8879585 8879702 -136709586 - L2 LINE L2 -6 3307 3190 486 311 33 0 chr10 8880182 8880365 -136708923 + MER5A DNA MER1_type 1 189 0 2522 90 11 25 chr10 8880889 8881254 -136708034 - THE1B LTR MaLR -4 360 1 2342 154 16 102 chr10 8881312 8881812 -136707476 - LTR32 LTR ERVL 0 471 15 23 0 0 0 chr10 8883043 8883066 -136706222 + AT_rich Low_complexity Low_complexity 1 23 0 1911 147 27 0 chr10 8884725 8885018 -136704270 - AluJb SINE Alu -11 301 1 209 358 63 21 chr10 8885297 8885392 -136703896 - L2 LINE L2 -33 3280 3182 244 274 16 24 chr10 8885409 8885533 -136703755 + (TA)n Simple_repeat Simple_repeat 2 124 0 26 88 0 0 chr10 8885930 8885998 -136703290 + AT_rich Low_complexity Low_complexity 1 68 0 806 181 0 0 chr10 8886025 8886158 -136703130 - FLAM_C SINE Alu 0 133 1 426 144 0 44 chr10 8886195 8886285 -136703003 + MER53 DNA DNA 102 187 -2 221 315 63 55 chr10 8886398 8886525 -136702763 - MIR SINE MIR -132 130 3 450 224 13 90 chr10 8886871 8887027 -136702261 - MIR SINE MIR -48 214 71 181 200 0 0 chr10 8887165 8887200 -136702088 + MIR SINE MIR 73 107 -155 26 30 0 0 chr10 8888029 8888062 -136701226 + AT_rich Low_complexity Low_complexity 1 33 0 198 307 50 40 chr10 8890269 8890370 -136698918 + MIR SINE MIR 44 145 -117 550 133 80 44 chr10 8891563 8891676 -136697612 - FLAM_C SINE Alu -26 117 1 5285 138 25 7 chr10 8893125 8893970 -136695318 + L1PB4 LINE L1 4934 5811 -345 327 25 0 0 chr10 8893970 8894010 -136695278 + (CA)n Simple_repeat Simple_repeat 2 41 0 5285 138 25 7 chr10 8894010 8894355 -136694933 + L1PB4 LINE L1 5811 6148 -8 229 317 64 94 chr10 8894756 8895084 -136694204 + L2 LINE L2 2874 3191 -81 632 216 26 0 chr10 8895287 8895403 -136693885 - 5S rRNA rRNA -2 119 1 22 0 0 0 chr10 8895602 8895624 -136693664 + AT_rich Low_complexity Low_complexity 1 22 0 422 274 102 97 chr10 8895666 8896560 -136692728 - HAL1b LINE L1 -37 1311 414 22 0 0 0 chr10 8897123 8897145 -136692143 + AT_rich Low_complexity Low_complexity 1 22 0 207 0 0 0 chr10 8897908 8897931 -136691357 + (TTTTC)n Simple_repeat Simple_repeat 2 24 0 2027 101 11 14 chr10 8897933 8898209 -136691079 - AluSx SINE Alu -31 281 7 320 327 74 0 chr10 8898487 8898649 -136690639 + L1ME LINE L1 5629 5802 -319 409 253 12 0 chr10 8899786 8899948 -136689340 + (TA)n Simple_repeat Simple_repeat 2 165 0 2218 110 6 0 chr10 8899948 8900276 -136689012 + L1P5 LINE L1 5419 5748 -408 225 222 0 0 chr10 8900282 8900327 -136688961 - L1MC4 LINE L1 -1339 6703 6659 471 113 0 0 chr10 8900332 8900403 -136688885 + (CA)n Simple_repeat Simple_repeat 2 72 0 1953 154 0 3 chr10 8902444 8902756 -136686532 - AluSx SINE Alu -1 311 1 22 94 0 0 chr10 8903332 8903396 -136685892 + AT_rich Low_complexity Low_complexity 1 64 0 224 301 36 12 chr10 8903799 8903882 -136685406 - L2 LINE L2 -212 3060 2976 288 263 0 50 chr10 8903986 8904085 -136685203 - MIR SINE MIR -51 211 118 219 156 0 78 chr10 8904417 8904481 -136684807 + A-rich Low_complexity Low_complexity 2 60 0 441 0 0 0 chr10 8905339 8905388 -136683900 + (CA)n Simple_repeat Simple_repeat 2 50 0 1929 144 18 0 chr10 8905408 8905685 -136683603 - AluSx SINE Alu -30 282 1 240 357 57 21 chr10 8905785 8905925 -136683363 - L2 LINE L2 -2 3311 3167 376 316 58 23 chr10 8906084 8906258 -136683030 - MIR SINE MIR -20 242 63 1447 192 106 32 chr10 8906426 8906795 -136682493 - MLT1F LTR MaLR -4 538 143 1880 123 75 34 chr10 8906819 8907177 -136682111 - THE1C LTR MaLR -2 373 1 727 242 0 0 chr10 8909499 8909660 -136679628 - L1PB4 LINE L1 -2 6154 5994 249 57 0 0 chr10 8909721 8909756 -136679532 + (TAGA)n Simple_repeat Simple_repeat 4 38 0 29 28 0 0 chr10 8909801 8909837 -136679451 + AT_rich Low_complexity Low_complexity 1 36 0 485 247 50 119 chr10 8910789 8911033 -136678255 - MLT1A1 LTR MaLR -3 587 312 1100 145 21 21 chr10 8911061 8911254 -136678034 - MLT1A1 LTR MaLR -171 194 2 668 113 19 0 chr10 8911254 8911360 -136677928 + L1MB7 LINE L1 6069 6176 -8 375 160 32 43 chr10 8911361 8911455 -136677833 + Charlie5 DNA MER1_type 2523 2615 0 25 31 0 0 chr10 8912025 8912057 -136677231 + AT_rich Low_complexity Low_complexity 1 32 0 205 200 0 0 chr10 8912343 8912383 -136676905 + T-rich Low_complexity Low_complexity 1 40 0 1572 85 4 17 chr10 8912451 8912686 -136676602 - L1MA2 LINE L1 0 6304 6073 25 0 0 0 chr10 8913131 8913156 -136676132 + AT_rich Low_complexity Low_complexity 1 25 0 1895 152 37 37 chr10 8914486 8914861 -136674427 - THE1C LTR MaLR 0 375 1 426 300 8 8 chr10 8915437 8915567 -136673721 + MLT1L LTR MaLR 24 153 -462 617 281 88 12 chr10 8915570 8915741 -136673547 + MER5A DNA MER1_type 2 185 -4 1098 288 47 32 chr10 8915741 8916206 -136673082 + MLT1L LTR MaLR 144 615 0 315 0 0 0 chr10 8917049 8917084 -136672204 + (TTTA)n Simple_repeat Simple_repeat 1 35 0 989 113 78 0 chr10 8917084 8917225 -136672063 - AluSp SINE Alu -32 281 130 267 54 0 0 chr10 8917348 8917385 -136671903 + (T)n Simple_repeat Simple_repeat 1 37 0 966 106 8 0 chr10 8917385 8917517 -136671771 - AluSp SINE Alu -180 133 1 267 41 61 0 chr10 8917811 8917860 -136671428 + (TA)n Simple_repeat Simple_repeat 1 52 0 3529 151 27 5 chr10 8917888 8918150 -136671138 + L1PB4 LINE L1 5520 5775 -381 234 62 0 0 chr10 8918150 8918182 -136671106 + (CA)n Simple_repeat Simple_repeat 2 33 0 3529 151 27 5 chr10 8918182 8918541 -136670747 + L1PB4 LINE L1 5775 6155 -1 516 125 0 0 chr10 8918623 8918703 -136670585 + MADE1 DNA Mariner 1 80 0 236 301 43 32 chr10 8919381 8919474 -136669814 - MIR SINE MIR -15 247 154 1155 77 6 22 chr10 8919984 8920167 -136669121 + (TTC)n Simple_repeat Simple_repeat 1 180 0 610 169 22 0 chr10 8920167 8920303 -136668985 + CT-rich Low_complexity Low_complexity 4 142 0 1750 136 4 0 chr10 8920320 8920571 -136668717 - AluSp SINE Alu -23 290 39 192 125 0 0 chr10 8921096 8921128 -136668160 + (TAA)n Simple_repeat Simple_repeat 2 33 0 329 280 75 0 chr10 8921134 8921227 -136668061 - MIR SINE MIR -3 259 160 501 250 30 18 chr10 8922922 8923090 -136666198 - MER96B DNA MER1_type? -247 170 1 200 184 20 0 chr10 8923170 8923219 -136666069 + GA-rich Low_complexity Low_complexity 3 52 0 1144 62 0 0 chr10 8923262 8923408 -136665880 - L1P3 LINE L1 -595 5559 5414 3871 71 4 2 chr10 8923408 8923915 -136665373 + L1PA7 LINE L1 5627 6135 -19 1610 192 0 19 chr10 8924978 8925286 -136664002 - AluJo SINE Alu -10 302 1 2180 114 0 16 chr10 8926169 8926476 -136662812 + AluSx SINE Alu 1 302 -10 263 286 26 13 chr10 8928063 8928140 -136661148 + MIR SINE MIR 18 95 -167 243 358 36 21 chr10 8928197 8928390 -136660898 + L2 LINE L2 3118 3313 0 2379 38 7 3 chr10 8928561 8928854 -136660434 - L1PA4 LINE L1 0 6155 5862 357 211 103 51 chr10 8928854 8928951 -136660337 - FLAM_A SINE Alu -31 102 22 22 70 0 0 chr10 8929102 8929145 -136660143 + AT_rich Low_complexity Low_complexity 1 43 0 21 0 0 0 chr10 8929977 8929998 -136659290 + AT_rich Low_complexity Low_complexity 1 21 0 974 278 45 42 chr10 8930072 8930453 -136658835 + L1ME LINE L1 3 384 -5686 388 91 152 0 chr10 8931046 8931112 -136658176 + MADE1 DNA Mariner 5 80 0 409 260 179 36 chr10 8931507 8931703 -136657585 + MIR SINE MIR 13 236 -26 271 266 89 57 chr10 8931718 8931842 -136657446 - MIR SINE MIR -25 237 110 3555 77 30 10 chr10 8932267 8932774 -136656514 + L1PA13 LINE L1 5646 6162 -1 2206 123 0 0 chr10 8933780 8934082 -136655206 + AluSx SINE Alu 1 302 -10 242 217 22 0 chr10 8934366 8934412 -136654876 + AluJ/monomer SINE Alu 1 47 -256 2090 126 0 0 chr10 8934931 8935224 -136654064 + AluSc SINE Alu 1 293 -16 341 378 25 51 chr10 8935456 8935771 -136653517 - L2 LINE L2 0 3272 2966 2390 88 0 0 chr10 8938055 8938352 -136650936 + AluSg SINE Alu 1 297 -13 322 236 113 0 chr10 8938661 8938767 -136650521 - L1ME4a LINE L1 -1 6120 6003 366 316 23 0 chr10 8938962 8939136 -136650152 - L1ME4a LINE L1 -237 5884 5707 249 269 39 58 chr10 8939149 8939253 -136650035 + L2 LINE L2 3212 3313 0 228 241 0 0 chr10 8939278 8939332 -136649956 - L1ME4a LINE L1 -461 5660 5607 37 0 0 0 chr10 8939543 8939580 -136649708 + AT_rich Low_complexity Low_complexity 1 37 0 507 270 167 15 chr10 8939811 8940015 -136649273 + MIR SINE MIR 12 246 -16 207 0 0 0 chr10 8941994 8942017 -136647271 + (CAAA)n Simple_repeat Simple_repeat 2 24 0 446 327 32 46 chr10 8942290 8942507 -136646781 + MIR SINE MIR 48 261 -1 1788 72 42 0 chr10 8942969 8943206 -136646082 - L1P4 LINE L1 -448 5713 5467 2145 101 3 0 chr10 8943210 8943520 -136645768 + AluSg SINE Alu 1 311 0 2286 124 3 3 chr10 8943522 8943876 -136645412 + L1PA14 LINE L1 5806 6159 -2 339 169 0 0 chr10 8944012 8944088 -136645200 - AluS SINE Alu -239 61 2 1509 193 3 0 chr10 8944088 8944404 -136644884 - L1M4 LINE L1 -1689 5478 5162 418 288 122 14 chr10 8944468 8944778 -136644510 - L1ME4a LINE L1 -755 5391 5143 381 318 69 11 chr10 8946004 8946240 -136643048 + MLT1J2 LTR MaLR 1 210 -240 841 369 109 3 chr10 8946535 8947168 -136642120 - L2 LINE L2 0 3313 2614 327 332 117 19 chr10 8947157 8947362 -136641926 + MIR SINE MIR 29 253 -9 * 480 301 81 35 chr10 8947716 8947889 -136641399 - MIR SINE MIR -48 214 34 7710 209 41 18 chr10 8947898 8948813 -136640475 - L1M4 LINE L1 -1953 5214 4322 441 36 0 0 chr10 8948813 8948868 -136640420 + (TG)n Simple_repeat Simple_repeat 1 55 0 1663 176 0 47 chr10 8948869 8949165 -136640123 - AluJo SINE Alu -30 282 1 7710 209 41 18 chr10 8949165 8950182 -136639106 - L1M4 LINE L1 -2844 4323 3235 225 0 0 0 chr10 8950236 8950261 -136639027 + (TG)n Simple_repeat Simple_repeat 2 26 0 1638 127 0 4 chr10 8950285 8950521 -136638767 - AluSx SINE Alu -77 235 1 3103 266 54 17 chr10 8950532 8952378 -136636910 - L1M4 LINE L1 -3944 3223 1614 499 261 67 0 chr10 8953343 8953462 -136635826 - FLAM_A SINE Alu -6 127 1 265 204 0 0 chr10 8954574 8954623 -136634665 - MIR3 SINE MIR -6 202 154 1968 121 0 16 chr10 8954784 8955098 -136634190 - L1PA13 LINE L1 -1 6162 5854 402 183 11 32 chr10 8955098 8955191 -136634097 - THE1C LTR MaLR 0 428 338 1315 141 65 43 chr10 8955296 8955573 -136633715 - THE1C LTR MaLR -91 284 2 392 154 0 0 chr10 8955574 8955639 -136633649 - L1PA13 LINE L1 -305 5858 5794 1849 149 21 0 chr10 8955641 8955929 -136633359 - AluJb SINE Alu -18 294 1 21 0 0 0 chr10 8956275 8956296 -136632992 + AT_rich Low_complexity Low_complexity 1 21 0 2170 229 105 28 chr10 8957281 8957331 -136631957 - MLT1E1 LTR MaLR 0 654 609 2825 130 16 5 chr10 8957331 8957754 -136631534 + MSTA LTR MaLR 1 428 0 2170 229 105 28 chr10 8957754 8958310 -136630978 - MLT1E1 LTR MaLR -45 609 1 206 116 23 0 chr10 8960127 8960170 -136629118 + CT-rich Low_complexity Low_complexity 1 44 0 732 199 76 28 chr10 8960211 8960462 -136628826 + MER114 LTR ERV 235 497 -151 387 0 0 0 chr10 8960732 8960775 -136628513 + (TG)n Simple_repeat Simple_repeat 2 44 0 288 214 0 0 chr10 8961811 8961867 -136627421 + MER94 DNA DNA 75 130 -4 664 333 59 71 chr10 8961877 8962453 -136626835 + MLT1K LTR MaLR 2 570 -18 2881 9 0 0 chr10 8962807 8963125 -136626163 - AluYb8 SINE Alu 0 318 1 389 283 145 0 chr10 8963227 8963372 -136625916 + MIR SINE MIR 74 239 -23 5759 67 0 0 chr10 8963594 8964357 -136624931 - L1PA6 LINE L1 -991 5155 4393 6982 51 5 5 chr10 8964357 8965349 -136623939 + L1PA6 LINE L1 5148 6136 -18 1973 150 10 0 chr10 8965911 8966218 -136623070 - AluJb SINE Alu -2 310 1 720 275 29 35 chr10 8966484 8966713 -136622575 + MIR SINE MIR 22 249 -13 223 263 53 0 chr10 8966912 8966969 -136622319 + MIR3 SINE MIR 113 172 -36 858 136 0 0 chr10 8967219 8967351 -136621937 - L1MA2 LINE L1 -1 6303 6172 1584 159 32 2 chr10 8967915 8968306 -136620982 - L1MA7 LINE L1 -1 6290 5782 246 32 0 0 chr10 8968307 8968338 -136620950 + (CA)n Simple_repeat Simple_repeat 2 32 0 268 196 20 0 chr10 8968338 8968389 -136620899 + L1M2 LINE L1 5647 5698 -593 247 130 0 0 chr10 8968459 8968505 -136620783 + LTR66 LTR ERVL 394 439 -171 314 326 0 0 chr10 8968520 8968609 -136620679 - L1MC4 LINE L1 -1340 6702 6614 * 349 292 0 0 chr10 8968530 8968619 -136620669 + L1MC4 LINE L1 6615 6703 -1339 697 206 21 21 chr10 8969055 8969244 -136620044 - MER53 DNA DNA 0 189 1 288 0 0 0 chr10 8969771 8969803 -136619485 + (CA)n Simple_repeat Simple_repeat 1 32 0 2036 129 0 3 chr10 8970243 8970537 -136618751 + AluSx SINE Alu 1 293 -19 969 192 34 24 chr10 8970848 8971056 -136618232 - MER6B DNA MER2_type 0 210 1 2107 108 0 9 chr10 8971085 8971400 -136617888 - L1PB1 LINE L1 -7 6144 5833 221 379 21 0 chr10 8971529 8971624 -136617664 - MIR SINE MIR -69 139 43 220 276 5 0 chr10 8972171 8972226 -136617062 + MIR SINE MIR 43 100 -108 423 346 33 40 chr10 8975245 8975517 -136613771 + L1ME LINE L1 46 315 -5755 684 180 66 0 chr10 8975570 8975692 -136613596 - FLAM_A SINE Alu 0 133 4 404 244 40 49 chr10 8975991 8976216 -136613072 + L1ME LINE L1 526 748 -5322 236 100 0 20 chr10 8976453 8976503 -136612785 + (CAAA)n Simple_repeat Simple_repeat 2 50 0 23 33 0 0 chr10 8977428 8977458 -136611830 + AT_rich Low_complexity Low_complexity 1 30 0 1741 138 0 0 chr10 8977460 8977714 -136611574 + AluSx SINE Alu 3 256 -56 189 0 0 0 chr10 8978699 8978720 -136610568 + (TTA)n Simple_repeat Simple_repeat 2 22 0 2106 104 0 10 chr10 8978722 8979011 -136610277 - AluY SINE Alu -23 288 3 444 305 69 42 chr10 8979266 8979528 -136609760 - MER102b DNA MER1_type -19 322 54 21 36 0 0 chr10 8980013 8980041 -136609247 + AT_rich Low_complexity Low_complexity 1 28 0 288 0 0 0 chr10 8980867 8980899 -136608389 + (CAAAAA)n Simple_repeat Simple_repeat 4 35 0 212 302 93 35 chr10 8980911 8980997 -136608291 + MIR3 SINE MIR 115 205 -3 1741 91 4 0 chr10 8981688 8981918 -136607370 + AluSq SINE Alu 73 303 -10 2447 50 0 3 chr10 8982099 8982399 -136606889 - AluY SINE Alu -12 299 1 362 340 92 57 chr10 8983590 8983629 -136605659 + L1MEd LINE L1 375 411 -5794 4598 89 1 15 chr10 8983629 8984292 -136604996 + L1PA10 LINE L1 5514 6167 -1 362 340 92 57 chr10 8984292 8984708 -136604580 + L1MEd LINE L1 411 846 -5359 24 0 0 0 chr10 8984954 8984978 -136604310 + AT_rich Low_complexity Low_complexity 1 24 0 239 263 150 0 chr10 8985070 8985150 -136604138 - MLT1D-int LTR MaLR -274 1097 1006 828 275 34 0 chr10 8985364 8985571 -136603717 - MLT1D-int LTR MaLR -493 878 665 1941 239 39 41 chr10 8985620 8986255 -136603033 - MLT1D-int LTR MaLR -711 660 27 260 188 0 0 chr10 8986264 8986312 -136602976 - MLT1D-int LTR MaLR -1323 48 1 * 2066 217 58 6 chr10 8986312 8986792 -136602496 - MLT1D LTR MaLR 0 505 1 447 285 62 7 chr10 8986792 8987056 -136602232 + L1MEd LINE L1 2112 2393 -4003 274 265 103 0 chr10 8987030 8987166 -136602122 + L1MEd LINE L1 2204 2353 -3862 * 543 275 103 31 chr10 8987140 8987500 -136601788 + L1MEd LINE L1 2204 2589 -3626 394 264 42 36 chr10 8987477 8987670 -136601618 + L1ME3A LINE L1 1455 1648 -4748 * 198 71 0 0 chr10 8987696 8987724 -136601564 + (TG)n Simple_repeat Simple_repeat 1 28 0 317 265 100 29 chr10 8987854 8988024 -136601264 + L1ME3A LINE L1 3759 3940 -2275 333 303 179 6 chr10 8988027 8988189 -136601099 + MLT1J1 LTR MaLR 13 202 -244 1119 286 26 47 chr10 8989002 8989659 -136599629 + L1ME3A LINE L1 4694 5336 -879 192 179 0 0 chr10 8989702 8989741 -136599547 + (TA)n Simple_repeat Simple_repeat 2 40 0 549 313 61 16 chr10 8989763 8990073 -136599215 + L1ME3A LINE L1 5383 5706 -527 180 0 0 0 chr10 8990077 8990097 -136599191 + (TG)n Simple_repeat Simple_repeat 2 21 0 283 191 55 9 chr10 8990108 8990218 -136599070 + (TA)n Simple_repeat Simple_repeat 1 115 0 623 260 23 6 chr10 8990235 8990412 -136598876 + L1ME3A LINE L1 5759 5938 -301 480 235 43 9 chr10 8990771 8990886 -136598402 - MER20 DNA MER1_type -4 215 97 253 254 0 15 chr10 8991402 8991469 -136597819 + CT-rich Low_complexity Low_complexity 1 66 0 237 386 101 6 chr10 8991922 8992080 -136597208 + MIR SINE MIR 39 211 -51 321 26 0 0 chr10 8992623 8992661 -136596627 + (TG)n Simple_repeat Simple_repeat 1 38 0 23 0 0 0 chr10 8994982 8995005 -136594283 + AT_rich Low_complexity Low_complexity 1 23 0 26 64 0 0 chr10 8996914 8996961 -136592327 + AT_rich Low_complexity Low_complexity 1 47 0 26 74 0 0 chr10 8999360 8999414 -136589874 + AT_rich Low_complexity Low_complexity 1 54 0 25 51 0 0 chr10 8999459 8999498 -136589790 + AT_rich Low_complexity Low_complexity 1 39 0 583 292 71 40 chr10 9000004 9000230 -136589058 - MIR SINE MIR 0 262 30 285 167 0 0 chr10 9002628 9002682 -136586606 + (TG)n Simple_repeat Simple_repeat 1 54 0 222 37 0 0 chr10 9004272 9004299 -136584989 + (CAAA)n Simple_repeat Simple_repeat 2 28 0 1946 132 6 10 chr10 9004732 9005043 -136584245 - AluSg SINE Alu 0 310 1 245 323 42 31 chr10 9005601 9005697 -136583591 - MIR SINE MIR -62 146 50 468 0 0 0 chr10 9005928 9005980 -136583308 + (TTA)n Simple_repeat Simple_repeat 3 54 0 934 94 0 0 chr10 9005980 9006107 -136583181 - L1PA7 LINE L1 -18 6136 6010 243 334 57 34 chr10 9010136 9010573 -136578715 + L1MEd LINE L1 519 965 -5154 486 317 68 100 chr10 9010840 9011358 -136577930 + L1MEd LINE L1 333 833 -5286 1957 230 65 8 chr10 9011359 9011851 -136577437 - MLT2B1 LTR ERVL 0 520 1 446 300 39 58 chr10 9011938 9012603 -136576685 + L1MEd LINE L1 925 1616 -874 513 301 14 0 chr10 9012604 9012750 -136576538 - MLT1H LTR MaLR -315 234 87 2191 121 3 3 chr10 9012890 9013195 -136576093 + AluY SINE Alu 1 305 -6 349 286 106 5 chr10 9013196 9013385 -136575903 + L1ME3A LINE L1 5730 5937 -233 302 277 138 31 chr10 9013633 9013924 -136575364 + L1ME LINE L1 5463 5588 -533 38 51 0 0 chr10 9015124 9015183 -136574105 + AT_rich Low_complexity Low_complexity 1 59 0 338 295 47 31 chr10 9015762 9015891 -136573397 + MIR SINE MIR 129 259 -3 657 102 0 0 chr10 9015922 9016020 -136573268 - AluY SINE Alu -12 299 202 2010 80 0 28 chr10 9016177 9016464 -136572824 - L1PA13 LINE L1 -11 6152 5874 1239 63 0 0 chr10 9016464 9016622 -136572666 + L1P4 LINE L1 5649 5806 -362 666 173 126 136 chr10 9017428 9017456 -136571832 - L1M4 LINE L1 -1792 4852 4825 225 65 0 0 chr10 9017456 9017487 -136571801 + (TA)n Simple_repeat Simple_repeat 1 31 0 666 173 126 136 chr10 9017487 9017759 -136571529 - L1M4 LINE L1 -1819 4825 4555 1544 231 29 21 chr10 9017775 9017905 -136571383 + MLT2C1 LTR ERVL 3 130 -267 1530 96 50 0 chr10 9017905 9018123 -136571165 - MER30 DNA MER1_type 0 230 2 1544 231 29 21 chr10 9018123 9018378 -136570910 + MLT2C1 LTR ERVL 130 391 -6 2282 248 56 20 chr10 9018386 9019175 -136570113 - L1M4 LINE L1 -2105 4539 3723 1441 156 86 78 chr10 9019465 9019837 -136569451 - THE1C LTR MaLR 0 375 1 554 258 66 56 chr10 9019888 9020175 -136569113 - L1M4 LINE L1 -6229 313 24 365 197 2 0 chr10 9020177 9020248 -136569040 + MLT1H1 LTR MaLR 476 553 -2 584 282 115 16 chr10 9020400 9020723 -136568565 + MER20B DNA MER1_type 406 760 -23 2359 102 0 0 chr10 9020752 9021055 -136568233 - AluSc SINE Alu -6 303 1 2330 11 0 0 chr10 9021247 9021512 -136567776 - L1PA2 LINE L1 0 6155 5891 2087 125 0 3 chr10 9021831 9022154 -136567134 + AluSq SINE Alu 1 322 0 291 312 186 10 chr10 9022255 9022652 -136566636 - LTR33 LTR ERVL -36 485 19 1688 171 54 6 chr10 9022965 9023281 -136566007 - MER7A DNA MER2_type -17 329 1 1150 273 85 65 chr10 9025817 9026382 -136562906 - L1ME3A LINE L1 -11 6159 5584 195 42 0 0 chr10 9027814 9027838 -136561450 + (TGAA)n Simple_repeat Simple_repeat 3 26 0 1111 231 148 13 chr10 9028071 9028374 -136560914 + MER2 DNA MER2_type 2 345 0 503 115 0 0 chr10 9028389 9028467 -136560821 + MADE1 DNA Mariner 1 78 -2 441 278 87 76 chr10 9028527 9029005 -136560283 - L2 LINE L2 -224 3089 2581 1981 136 0 14 chr10 9029005 9029331 -136559957 - AluSx SINE Alu 0 322 1 441 278 87 76 chr10 9029331 9029386 -136559902 - L2 LINE L2 -732 2581 2528 2197 119 0 3 chr10 9029393 9029695 -136559593 - AluSq SINE Alu -12 301 1 425 244 15 15 chr10 9029779 9029910 -136559378 + LTR33 LTR ERVL 388 518 -3 249 227 121 0 chr10 9029913 9029979 -136559309 + L2 LINE L2 3199 3272 0 4213 67 5 2 chr10 9030530 9031082 -136558206 + MER41A LTR ERV1 1 554 0 255 61 0 0 chr10 9031581 9031614 -136557674 + (GGAA)n Simple_repeat Simple_repeat 4 36 0 580 188 27 0 chr10 9031700 9031883 -136557405 + L1PA16 LINE L1 5936 6158 -8 23 33 0 0 chr10 9031883 9031913 -136557375 + AT_rich Low_complexity Low_complexity 1 30 0 499 204 10 0 chr10 9032575 9032673 -136556615 - LTR9 LTR ERV1 0 612 514 2870 159 12 55 chr10 9032921 9033499 -136555789 - LTR9 LTR ERV1 -57 555 3 2938 279 63 23 chr10 9034683 9036037 -136553251 + L1ME1 LINE L1 34 1442 -4954 1608 210 108 50 chr10 9036083 9036603 -136552685 - MLT1E1 LTR MaLR -10 644 95 2628 248 76 61 chr10 9036699 9038002 -136551286 + L1ME1 LINE L1 3690 5012 -1203 2193 260 40 12 chr10 9037993 9038784 -136550504 + L1ME1 LINE L1 5347 6223 -12 * 237 270 16 0 chr10 9039109 9039172 -136550116 + L2 LINE L2 3245 3308 -5 297 324 9 9 chr10 9039368 9039473 -136549815 - MIR SINE MIR -39 223 119 5716 136 29 20 chr10 9039503 9039581 -136549707 - L1MA8 LINE L1 0 6291 6215 2158 132 0 0 chr10 9039581 9039884 -136549404 + AluSx SINE Alu 1 303 -9 5716 136 29 20 chr10 9039884 9040905 -136548383 - L1MA8 LINE L1 -76 6215 5183 241 281 52 52 chr10 9042890 9043025 -136546263 - L2 LINE L2 -18 3295 3161 1434 191 44 49 chr10 9043252 9043618 -136545670 + MLT1A1 LTR MaLR 2 365 0 229 171 157 29 chr10 9044070 9044140 -136545148 - L2 LINE L2 -2 3311 3233 24 53 0 0 chr10 9044453 9044491 -136544797 + AT_rich Low_complexity Low_complexity 1 38 0 441 0 0 0 chr10 9044657 9044706 -136544582 + (TG)n Simple_repeat Simple_repeat 2 50 0 198 118 0 0 chr10 9044705 9044739 -136544549 + (TA)n Simple_repeat Simple_repeat 1 34 0 * 245 401 31 0 chr10 9045964 9046082 -136543206 + MIR SINE MIR 46 165 -65 212 328 143 17 chr10 9046097 9046216 -136543072 - MIR SINE MIR -83 179 46 2230 101 3 0 chr10 9046595 9046892 -136542396 + AluSp SINE Alu 1 298 -15 261 83 0 0 chr10 9047481 9047517 -136541771 + (A)n Simple_repeat Simple_repeat 1 36 0 348 24 0 0 chr10 9048354 9048395 -136540893 + (TC)n Simple_repeat Simple_repeat 2 42 0 25 31 0 0 chr10 9048556 9048588 -136540700 + AT_rich Low_complexity Low_complexity 1 32 0 206 32 32 0 chr10 9050473 9050504 -136538784 + (CAAA)n Simple_repeat Simple_repeat 2 33 0 207 0 0 0 chr10 9051547 9051570 -136537718 + (TA)n Simple_repeat Simple_repeat 2 24 0 25 0 0 0 chr10 9051570 9051595 -136537693 + AT_rich Low_complexity Low_complexity 1 25 0 21 36 0 0 chr10 9052316 9052344 -136536944 + AT_rich Low_complexity Low_complexity 1 28 0 29 28 0 0 chr10 9052446 9052482 -136536806 + AT_rich Low_complexity Low_complexity 1 36 0 329 259 89 13 chr10 9053129 9053353 -136535935 + L1M4 LINE L1 2800 3040 -3106 28 48 0 0 chr10 9053468 9053510 -136535778 + AT_rich Low_complexity Low_complexity 1 42 0 405 0 0 0 chr10 9053779 9053824 -136535464 + (TAGA)n Simple_repeat Simple_repeat 2 46 0 2549 61 0 6 chr10 9054240 9054553 -136534735 - AluY SINE Alu 0 311 1 22 0 0 0 chr10 9054564 9054586 -136534702 + AT_rich Low_complexity Low_complexity 1 22 0 198 0 0 0 chr10 9054896 9054918 -136534370 + (A)n Simple_repeat Simple_repeat 1 22 0 24 0 0 0 chr10 9056290 9056314 -136532974 + AT_rich Low_complexity Low_complexity 1 24 0 225 311 11 0 chr10 9056733 9056823 -136532465 + MIR SINE MIR 120 210 -52 626 226 0 8 chr10 9057072 9057196 -136532092 - FLAM_A SINE Alu -10 123 1 225 347 0 14 chr10 9059724 9059796 -136529492 + MIR SINE MIR 78 148 -60 1580 191 3 27 chr10 9060305 9060603 -136528685 + AluJo SINE Alu 1 291 -21 379 223 45 36 chr10 9060629 9060741 -136528547 - MER112 DNA MER1_type -11 249 137 278 269 36 102 chr10 9061355 9061522 -136527766 + MIR SINE MIR 59 214 -48 2172 167 80 82 chr10 9062112 9062627 -136526661 - MLT2B1 LTR ERVL -1 519 6 395 83 0 0 chr10 9062798 9062858 -136526430 - L1MA3 LINE L1 -4 6301 6242 5084 60 0 6 chr10 9063320 9063972 -136525316 + L1PA8 LINE L1 5521 6168 -4 2363 66 0 13 chr10 9064475 9064778 -136524510 - AluY SINE Alu -12 299 1 24 32 0 0 chr10 9064820 9064851 -136524437 + AT_rich Low_complexity Low_complexity 1 31 0 1001 113 251 0 chr10 9064852 9065055 -136524233 - L1MA3 LINE L1 -1 6304 6051 377 320 96 6 chr10 9065970 9066148 -136523140 + MIR SINE MIR 66 259 -3 976 232 122 41 chr10 9068375 9069012 -136520276 - HAL1 LINE L1 -874 1633 945 474 308 180 31 chr10 9069023 9069572 -136519716 - HAL1 LINE L1 -1729 778 148 2848 202 58 68 chr10 9069740 9070621 -136518667 + L1MB5 LINE L1 5294 6165 -9 1846 118 0 4 chr10 9071340 9071585 -136517703 + AluSq SINE Alu 37 280 -33 225 0 0 0 chr10 9071585 9071610 -136517678 + (CAAAA)n Simple_repeat Simple_repeat 2 26 0 33 25 0 0 chr10 9071826 9071866 -136517422 + AT_rich Low_complexity Low_complexity 1 40 0 451 370 106 12 chr10 9071973 9072303 -136516985 - L3 LINE CR1 -18 1559 1199 226 385 113 9 chr10 9072383 9072596 -136516692 - L3 LINE CR1 -839 738 504 22 0 0 0 chr10 9072628 9072650 -136516638 + AT_rich Low_complexity Low_complexity 1 22 0 197 357 14 0 chr10 9072885 9072955 -136516333 - MIR3 SINE MIR -49 159 89 344 238 88 103 chr10 9072966 9073227 -136516061 + L1MEc LINE L1 2076 2332 -4064 263 253 98 55 chr10 9073713 9074112 -136515176 + L1MEc LINE L1 2879 3294 -2921 335 318 56 28 chr10 9074517 9074876 -136514412 + L1MEc LINE L1 3808 4176 -2039 201 153 17 34 chr10 9075433 9075492 -136513796 + A-rich Low_complexity Low_complexity 3 60 0 23 54 0 0 chr10 9075746 9075783 -136513505 + AT_rich Low_complexity Low_complexity 1 37 0 226 345 12 24 chr10 9075836 9075920 -136513368 - MIR SINE MIR -89 119 37 2339 163 16 0 chr10 9076000 9076436 -136512852 + L1MA7 LINE L1 5830 6272 -19 1521 104 62 134 chr10 9077926 9078233 -136511055 - AluSx SINE Alu -17 295 11 2017 136 0 0 chr10 9079645 9079952 -136509336 + AluSq SINE Alu 1 307 0 1408 175 0 0 chr10 9080230 9080453 -136508835 - AluSg/x SINE Alu -8 304 82 186 245 21 11 chr10 9080855 9080949 -136508339 + (TA)n Simple_repeat Simple_repeat 1 95 0 318 312 0 37 chr10 9080955 9081064 -136508224 + L1MC4 LINE L1 6614 6718 -1324 270 310 60 40 chr10 9081153 9081300 -136507988 + MIR SINE MIR 33 172 -63 302 250 21 52 chr10 9081395 9081491 -136507797 - MIR3 SINE MIR -35 173 81 437 311 87 78 chr10 9081778 9082356 -136506932 - L2 LINE L2 -546 2768 2186 540 272 29 4 chr10 9083024 9083206 -136506082 + MIR SINE MIR 30 213 -49 230 56 28 0 chr10 9085822 9085858 -136503430 + (TTTTC)n Simple_repeat Simple_repeat 3 39 0 1103 116 12 0 chr10 9085863 9086027 -136503261 - AluSg/x SINE Alu -2 308 143 228 188 0 62 chr10 9086584 9086648 -136502640 + T-rich Low_complexity Low_complexity 1 60 0 180 200 0 0 chr10 9087571 9087611 -136501677 + CT-rich Low_complexity Low_complexity 1 40 0 206 362 32 0 chr10 9087842 9087936 -136501352 + MIR SINE MIR 43 139 -69 7553 23 1 3 chr10 9088476 9089885 -136499403 - L1PA4 LINE L1 -3 6152 4744 533 238 73 6 chr10 9090283 9090447 -136498841 + L1M4 LINE L1 4804 4978 -1168 23 33 0 0 chr10 9090815 9090845 -136498443 + AT_rich Low_complexity Low_complexity 1 30 0 33 25 0 0 chr10 9090926 9090966 -136498322 + AT_rich Low_complexity Low_complexity 1 40 0 40 21 0 0 chr10 9091179 9091226 -136498062 + AT_rich Low_complexity Low_complexity 1 47 0 220 205 0 0 chr10 9092461 9092500 -136496788 + CT-rich Low_complexity Low_complexity 3 41 0 320 229 83 28 chr10 9093286 9093395 -136495893 + MIR SINE MIR 30 144 -118 9358 34 16 138 chr10 9093507 9094966 -136494322 + SVA Other Other 15 1296 -90 2565 195 16 56 chr10 9095114 9095975 -136493313 + L1 LINE L1 4416 5242 -904 1588 147 4 0 chr10 9096298 9096536 -136492752 + AluSg/x SINE Alu 74 312 0 854 177 40 17 chr10 9096578 9096753 -136492535 + MER1B DNA MER1_type 107 285 -54 434 33 16 0 chr10 9096738 9096799 -136492489 + MER41B LTR ERV1 484 545 -90 * 430 16 0 0 chr10 9097623 9097685 -136491603 + AluY SINE Alu 249 310 0 437 237 108 21 chr10 9099543 9099737 -136489551 - L1MC4 LINE L1 -2 8040 7830 1001 161 28 0 chr10 9101031 9101211 -136488077 + MER5A DNA MER1_type 5 189 0 439 290 167 5 chr10 9105006 9105192 -136484096 - MIR SINE MIR 0 262 47 683 259 52 4 chr10 9106146 9106378 -136482910 + L1MEc LINE L1 36 278 -6118 1214 190 51 63 chr10 9107529 9107924 -136481364 + MLT1B LTR MaLR 1 390 0 250 188 12 35 chr10 9108764 9108888 -136480400 + (TTTA)n Simple_repeat Simple_repeat 1 121 0 26 50 0 0 chr10 9108969 9109009 -136480279 + AT_rich Low_complexity Low_complexity 1 40 0 975 94 22 22 chr10 9109254 9109435 -136479853 + SVA Other Other 687 867 -519 6282 59 30 56 chr10 9109447 9110429 -136478859 + SVA Other Other 430 1386 0 236 304 43 0 chr10 9111007 9111076 -136478212 + MIR SINE MIR 31 102 -106 2203 55 0 0 chr10 9111365 9111636 -136477652 - L1PA5 LINE L1 -17 6137 5867 23 0 0 0 chr10 9111654 9111677 -136477611 + AT_rich Low_complexity Low_complexity 1 23 0 2389 102 6 0 chr10 9112538 9112880 -136476408 - L1PA13 LINE L1 -2 6161 5818 210 145 0 48 chr10 9112999 9113061 -136476227 + (TAAAAA)n Simple_repeat Simple_repeat 1 59 0 344 0 71 0 chr10 9115496 9115552 -136473736 + (TG)n Simple_repeat Simple_repeat 2 61 0 285 75 0 0 chr10 9117383 9117423 -136471865 + (CA)n Simple_repeat Simple_repeat 1 40 0 973 268 32 52 chr10 9118612 9119015 -136470273 - MLT2C1 LTR ERVL -2 395 1 932 154 0 30 chr10 9119363 9119532 -136469756 + FRAM SINE Alu 1 164 -2 227 234 182 0 chr10 9119684 9119761 -136469527 - L1MA10 LINE L1 -8 6326 6236 2497 237 56 34 chr10 9119774 9121418 -136467870 - L1ME1 LINE L1 -117 6118 4443 1113 265 42 35 chr10 9121461 9121895 -136467393 + L1MCb LINE L1 8 444 -5601 792 267 49 4 chr10 9121894 9122141 -136467147 - L1ME1 LINE L1 -6103 293 36 * 21 57 0 0 chr10 9122504 9122539 -136466749 + AT_rich Low_complexity Low_complexity 1 35 0 205 407 47 0 chr10 9122561 9122647 -136466641 + L2 LINE L2 3140 3229 -43 2044 133 0 3 chr10 9122674 9122967 -136466321 - AluSx SINE Alu -7 305 14 23 33 0 0 chr10 9124467 9124497 -136464791 + AT_rich Low_complexity Low_complexity 1 30 0 334 268 114 24 chr10 9124599 9124722 -136464566 - L2 LINE L2 -4 3309 3176 205 208 47 104 chr10 9124782 9124888 -136464400 - L2 LINE L2 0 3313 3214 770 234 38 28 chr10 9125100 9125317 -136463971 - MLT2B2 LTR ERVL 0 515 250 676 190 69 66 chr10 9125317 9125579 -136463709 + L1MC3 LINE L1 2335 2600 -3826 2066 122 3 7 chr10 9125579 9125875 -136463413 + AluSc SINE Alu 1 295 -14 676 190 69 66 chr10 9125875 9125970 -136463318 + L1MC3 LINE L1 2600 2693 -3733 186 118 0 0 chr10 9125978 9126012 -136463276 + (TAAAAA)n Simple_repeat Simple_repeat 2 35 0 1318 221 18 49 chr10 9126012 9126500 -136462788 + L1MC3 LINE L1 3074 3546 -2880 * 9966 211 41 37 chr10 9126489 9130565 -136458723 + L1MC3 LINE L1 3969 8057 -8 1702 124 4 4 chr10 9130957 9131199 -136458089 + AluSc SINE Alu 1 242 -67 2226 216 17 4 chr10 9131439 9131911 -136457377 - MER66A LTR ERV1 0 478 1 1831 139 33 0 chr10 9132982 9133255 -136456033 - AluSx SINE Alu -28 284 3 381 262 122 67 chr10 9134070 9134234 -136455054 - MLT1J2 LTR MaLR -240 210 38 359 403 35 30 chr10 9134611 9134842 -136454446 - MIR SINE MIR -21 241 10 280 243 14 29 chr10 9135173 9135243 -136454045 - L2 LINE L2 -1 3312 3244 1603 110 27 11 chr10 9135438 9135701 -136453587 - L1PA13 LINE L1 -4 6159 5893 283 243 57 0 chr10 9136040 9136110 -136453178 + MIR SINE MIR 56 129 -79 1405 111 9 18 chr10 9136564 9136789 -136452499 + L1PA10 LINE L1 5942 6164 -4 5084 135 11 7 chr10 9137281 9138109 -136451179 - L1PA16 LINE L1 -10 6156 5326 212 0 36 0 chr10 9138237 9138265 -136451023 + (TATAA)n Simple_repeat Simple_repeat 4 32 0 2188 87 0 17 chr10 9140129 9140416 -136448872 - AluSg SINE Alu -28 282 1 484 246 41 25 chr10 9140417 9140539 -136448749 + MIR SINE MIR 63 186 -76 231 339 101 9 chr10 9140638 9140747 -136448541 + L2 LINE L2 3148 3266 -6 22 0 0 0 chr10 9141248 9141270 -136448018 + AT_rich Low_complexity Low_complexity 1 22 0 256 313 81 0 chr10 9141698 9141797 -136447491 + L2 LINE L2 3200 3306 -7 1772 222 76 40 chr10 9141945 9142110 -136447178 - L1MC4 LINE L1 -178 7864 7706 1718 170 0 42 chr10 9142110 9142416 -136446872 - AluJo SINE Alu -17 295 3 1772 222 76 40 chr10 9142416 9142827 -136446461 - L1MC4 LINE L1 -336 7706 7267 393 225 0 22 chr10 9142853 9142942 -136446346 - L1MC4 LINE L1 -749 7293 7207 45 62 0 0 chr10 9143259 9143339 -136445949 + AT_rich Low_complexity Low_complexity 1 80 0 22 35 0 0 chr10 9145385 9145414 -136443874 + AT_rich Low_complexity Low_complexity 1 29 0 3173 52 7 7 chr10 9146279 9146686 -136442602 + L1PA7 LINE L1 5737 6143 -11 22 56 0 0 chr10 9146686 9146722 -136442566 + AT_rich Low_complexity Low_complexity 1 36 0 251 326 56 11 chr10 9147280 9147369 -136441919 - L2 LINE L2 0 3272 3180 223 326 81 0 chr10 9147492 9147578 -136441710 + L2 LINE L2 3220 3312 -1 1909 95 56 0 chr10 9148589 9148874 -136440414 + L1PA10 LINE L1 5863 6163 -5 277 324 0 0 chr10 9149518 9149586 -136439702 - L2 LINE L2 0 3313 3246 21 57 0 0 chr10 9150421 9150456 -136438832 + AT_rich Low_complexity Low_complexity 1 35 0 207 0 0 0 chr10 9152384 9152407 -136436881 + (CA)n Simple_repeat Simple_repeat 2 24 0 26 64 0 0 chr10 9153404 9153451 -136435837 + AT_rich Low_complexity Low_complexity 1 47 0 1627 166 0 11 chr10 9153473 9153787 -136435501 - AluJb SINE Alu 0 327 17 1005 164 36 41 chr10 9154453 9154672 -136434616 - AluJo SINE Alu -9 303 86 2243 233 34 12 chr10 9154831 9155427 -136433861 - L1MC4a LINE L1 -155 7653 7045 231 36 0 0 chr10 9155441 9155469 -136433819 + (TTCA)n Simple_repeat Simple_repeat 3 30 0 2259 26 7 0 chr10 9155529 9155799 -136433489 - L1PA4 LINE L1 -3 6152 5881 824 236 107 23 chr10 9156430 9156978 -136432310 + L1MD2 LINE L1 5528 6161 -5 2909 156 20 0 chr10 9157000 9157501 -136431787 + L1PB4 LINE L1 5639 6149 -7 348 261 72 52 chr10 9157795 9157948 -136431340 - L2 LINE L2 0 3313 3158 2010 122 95 12 chr10 9158229 9158565 -136430723 + THE1B LTR MaLR 1 364 0 1443 186 80 0 chr10 9158617 9158905 -136430383 - AluJb SINE Alu 0 309 1 327 298 108 25 chr10 9158905 9159063 -136430225 + MIR SINE MIR 35 205 -57 313 222 32 0 chr10 9159630 9159693 -136429595 - L2 LINE L2 0 3313 3249 285 310 85 101 chr10 9159799 9160057 -136429231 - L2 LINE L2 -5 3267 3014 1076 151 0 0 chr10 9160523 9160689 -136428599 - AluSg/x SINE Alu -2 310 145 2369 73 0 3 chr10 9160898 9161198 -136428090 - AluSc SINE Alu -9 300 2 488 237 21 156 chr10 9161433 9161716 -136427572 - MIR SINE MIR -2 260 16 193 269 118 32 chr10 9162923 9163016 -136426272 - MIR SINE MIR 0 262 162 239 318 15 0 chr10 9164178 9164244 -136425044 - L2 LINE L2 -1 3271 3205 2140 125 42 28 chr10 9164269 9164628 -136424660 - THE1B LTR MaLR 0 364 1 382 233 41 34 chr10 9164840 9165090 -136424198 + MLT1H1 LTR MaLR 120 376 -214 182 337 105 0 chr10 9165279 9165374 -136423914 + MIR SINE MIR 71 175 -87 849 184 38 160 chr10 9165420 9165520 -136423768 + MER33 DNA MER1_type 1 112 -2473 1935 144 9 3 chr10 9165520 9165860 -136423428 + L1MA2 LINE L1 5963 6304 0 849 184 38 160 chr10 9165860 9166128 -136423160 + MER33 DNA MER1_type 112 324 0 4105 132 9 0 chr10 9166234 9166886 -136422402 - L1MA2 LINE L1 -15 6289 5632 1675 97 132 8 chr10 9167086 9167344 -136421944 - AluSx SINE Alu -22 290 1 22 99 0 0 chr10 9167983 9168054 -136421234 + AT_rich Low_complexity Low_complexity 1 71 0 225 159 0 0 chr10 9169678 9169722 -136419566 + (TG)n Simple_repeat Simple_repeat 2 45 0 293 186 29 43 chr10 9169914 9169984 -136419304 - L1ME4a LINE L1 -69 6052 5984 746 334 97 45 chr10 9170213 9170719 -136418569 - L2 LINE L2 -31 3282 2804 1647 167 7 33 chr10 9170719 9171025 -136418263 - AluJo SINE Alu -13 299 2 746 334 97 45 chr10 9171025 9171300 -136417988 - L2 LINE L2 -509 2804 2451 1255 175 54 35 chr10 9171300 9171614 -136417674 - MER33 DNA MER1_type 0 324 5 746 334 97 45 chr10 9171614 9171790 -136417498 - L2 LINE L2 -862 2451 2286 328 315 68 25 chr10 9171794 9172115 -136417173 - L1ME4a LINE L1 -304 5817 5483 269 377 51 55 chr10 9172957 9173448 -136415840 - L2 LINE L2 -340 2974 2486 389 161 11 0 chr10 9173809 9173896 -136415392 + (TAGA)n Simple_repeat Simple_repeat 3 90 0 1301 197 38 112 chr10 9174163 9174584 -136414704 - MLT1B LTR MaLR 0 390 1 2075 109 0 3 chr10 9174590 9174893 -136414395 + AluSq SINE Alu 1 302 0 314 274 9 19 chr10 9174910 9175016 -136414272 + (TATATG)n Simple_repeat Simple_repeat 2 106 0 780 103 46 17 chr10 9175577 9175752 -136413536 + CT-rich Low_complexity Low_complexity 1 180 0 2055 108 16 10 chr10 9175765 9176071 -136413217 - AluSg SINE Alu -1 309 2 2865 240 68 48 chr10 9176117 9176168 -136413120 - L1ME1 LINE L1 -5 6161 6113 1176 183 99 56 chr10 9176168 9176490 -136412798 - MER44D DNA MER2_type -2 607 2 2865 240 68 48 chr10 9176490 9177879 -136411409 - L1ME1 LINE L1 -53 6113 4687 195 360 114 0 chr10 9177896 9178010 -136411278 - MIR SINE MIR -26 236 110 4914 236 50 50 chr10 9178043 9180223 -136409065 + L1MDa LINE L1 889 3158 -3382 4045 167 6 4 chr10 9180223 9180925 -136408363 - L1PA16 LINE L1 -1 6165 5463 4914 236 50 50 chr10 9180925 9182066 -136407222 + L1MDa LINE L1 3158 4297 -2243 1385 148 4 18 chr10 9182066 9182295 -136406993 - AluJb SINE Alu -86 226 1 1016 246 54 22 chr10 9182322 9182599 -136406689 + L1MDa LINE L1 4346 4631 -1909 498 146 64 27 chr10 9182608 9182718 -136406570 + L1MD2 LINE L1 6246 6359 0 496 44 0 0 chr10 9182736 9182825 -136406463 + L1PA3 LINE L1 6087 6175 0 25 83 0 0 chr10 9183291 9183351 -136405937 + AT_rich Low_complexity Low_complexity 1 60 0 263 323 31 8 chr10 9183387 9183517 -136405771 + L1MEc LINE L1 70 202 -6194 349 329 40 22 chr10 9183855 9184083 -136405205 + L1MEc LINE L1 638 869 -5527 210 71 0 0 chr10 9184249 9184277 -136405011 + (TTTTA)n Simple_repeat Simple_repeat 1 28 0 883 318 112 33 chr10 9184676 9185248 -136404040 - L2 LINE L2 -577 2737 2121 2680 186 40 20 chr10 9185702 9186309 -136402979 - L1 LINE L1 -1902 4244 3626 438 250 35 0 chr10 9187815 9187931 -136401357 - MER94 DNA DNA -12 122 3 2866 130 77 83 chr10 9187990 9188629 -136400659 + MER41B LTR ERV1 1 635 0 23 0 0 0 chr10 9189865 9189888 -136399400 + AT_rich Low_complexity Low_complexity 1 23 0 25 0 0 0 chr10 9191009 9191034 -136398254 + AT_rich Low_complexity Low_complexity 1 25 0 951 88 15 0 chr10 9191063 9191200 -136398088 - L1PB2 LINE L1 -7 6144 6006 1511 182 19 4 chr10 9191200 9191464 -136397824 - AluJb SINE Alu -44 268 1 403 348 82 16 chr10 9192255 9192499 -136396789 - MIR SINE MIR 0 262 3 303 28 0 0 chr10 9193900 9193936 -136395352 + (TCTA)n Simple_repeat Simple_repeat 3 38 0 22 35 0 0 chr10 9194737 9194766 -136394522 + AT_rich Low_complexity Low_complexity 1 29 0 4960 79 138 18 chr10 9195065 9195260 -136394028 + L1PA10 LINE L1 5298 5468 -700 2112 128 3 0 chr10 9195260 9195556 -136393732 + AluSq SINE Alu 1 297 -16 4960 79 138 18 chr10 9195556 9196136 -136393152 + L1PA10 LINE L1 5468 6166 -2 212 200 22 0 chr10 9196354 9196399 -136392889 + A-rich Low_complexity Low_complexity 5 50 0 207 213 21 21 chr10 9196613 9196660 -136392628 - L2 LINE L2 -2 3311 3265 423 202 0 0 chr10 9197035 9197144 -136392144 + (CA)n Simple_repeat Simple_repeat 2 110 0 1239 241 116 7 chr10 9197596 9198010 -136391278 - MLT1C LTR MaLR -8 459 1 858 88 0 0 chr10 9198585 9198744 -136390544 - L1PA8 LINE L1 -11 6161 6027 1750 131 53 3 chr10 9198847 9198972 -136390316 + AluSx SINE Alu 1 118 -194 459 0 0 0 chr10 9198972 9199023 -136390265 + (CA)n Simple_repeat Simple_repeat 2 52 0 1750 131 53 3 chr10 9199023 9199179 -136390109 + AluSx SINE Alu 118 296 -16 396 286 127 45 chr10 9199238 9199483 -136389805 + L1ME LINE L1 5408 5672 -449 247 211 0 0 chr10 9199547 9199599 -136389689 + L1ME LINE L1 5757 5808 -356 468 197 0 63 chr10 9199760 9199887 -136389401 + L1ME1 LINE L1 4562 4680 -1466 2010 135 0 3 chr10 9199970 9200307 -136388981 + AluSq SINE Alu 1 313 0 242 240 80 0 chr10 9200553 9200653 -136388635 + L1ME1 LINE L1 5122 5229 -917 391 317 88 4 chr10 9200672 9200934 -136388354 + L1M2 LINE L1 5256 5539 -761 383 256 74 17 chr10 9200930 9201106 -136388182 + L1ME1 LINE L1 5711 5896 -274 * 1061 228 26 98 chr10 9201140 9201526 -136387762 - MLT1A2 LTR MaLR -16 358 1 6394 89 4 2 chr10 9203251 9204276 -136385012 + L1PA14 LINE L1 5121 6156 -5 22 0 0 0 chr10 9204282 9204304 -136384984 + AT_rich Low_complexity Low_complexity 1 22 0 324 269 53 58 chr10 9204522 9204693 -136384595 + MLT1J2 LTR MaLR 280 449 -1 286 369 114 23 chr10 9204740 9205003 -136384285 + L3 LINE CR1 68 354 -1223 233 325 117 8 chr10 9205311 9205431 -136383857 - MIR SINE MIR -129 133 1 1786 296 143 11 chr10 9206028 9206744 -136382544 - L2 LINE L2 -446 2868 2059 21 0 0 0 chr10 9207108 9207129 -136382159 + AT_rich Low_complexity Low_complexity 1 21 0 1497 122 0 14 chr10 9208828 9209042 -136380246 - AluSg SINE Alu -99 211 1 24 53 0 0 chr10 9209049 9209087 -136380201 + AT_rich Low_complexity Low_complexity 1 38 0 180 313 91 40 chr10 9209098 9209197 -136380091 - L3b LINE CR1 -189 1394 1291 545 288 9 39 chr10 9209278 9209342 -136379946 + L1ME1 LINE L1 5919 5983 -183 2249 146 5 19 chr10 9209342 9209711 -136379577 - THE1B LTR MaLR 0 364 1 545 288 9 39 chr10 9209711 9209879 -136379409 + L1ME1 LINE L1 5983 6144 -22 247 215 9 28 chr10 9209895 9210002 -136379286 + (TA)n Simple_repeat Simple_repeat 2 106 0 384 302 145 35 chr10 9210462 9210717 -136378571 + MLT1I LTR MaLR 21 303 -106 1346 278 16 5 chr10 9210726 9211108 -136378180 - L2 LINE L2 -693 2621 2236 637 325 43 9 chr10 9214085 9214316 -136374972 + MIR SINE MIR 24 262 0 2051 143 0 6 chr10 9214440 9214754 -136374534 - AluSx SINE Alu 0 312 1 186 71 0 0 chr10 9214881 9214909 -136374379 + (TA)n Simple_repeat Simple_repeat 1 28 0 180 0 0 0 chr10 9215054 9215074 -136374214 + (TG)n Simple_repeat Simple_repeat 2 21 0 2064 138 0 0 chr10 9215421 9215712 -136373576 - AluSx SINE Alu -20 292 2 520 154 24 49 chr10 9215993 9216116 -136373172 - L1MC2 LINE L1 0 6344 6225 466 284 100 15 chr10 9216447 9216718 -136372570 + LTR33A LTR ERVL 230 523 0 261 0 0 0 chr10 9216767 9216796 -136372492 + (A)n Simple_repeat Simple_repeat 1 29 0 306 254 56 63 chr10 9217325 9217451 -136371837 + L2 LINE L2 3189 3313 0 789 205 0 26 chr10 9217595 9217751 -136371537 + FRAM SINE Alu 1 152 -24 22 0 0 0 chr10 9218707 9218729 -136370559 + AT_rich Low_complexity Low_complexity 1 22 0 308 240 124 41 chr10 9220209 9220330 -136368958 - MIR SINE MIR -62 200 70 216 354 0 76 chr10 9220375 9220519 -136368769 + L2 LINE L2 3139 3271 -1 734 172 0 51 chr10 9221646 9221803 -136367485 + AluJo SINE Alu 39 187 -125 194 105 26 0 chr10 9222797 9222835 -136366453 + (TAGA)n Simple_repeat Simple_repeat 4 42 0 2089 124 0 3 chr10 9223056 9223346 -136365942 - AluSg SINE Alu -21 289 1 5009 32 0 0 chr10 9224115 9224713 -136364575 - L1PA3 LINE L1 -1046 5100 4503 7835 14 0 0 chr10 9224713 9225737 -136363551 + L1PA3 LINE L1 5132 6155 0 626 37 86 12 chr10 9225922 9226077 -136363211 + (TA)n Simple_repeat Simple_repeat 1 170 -4 1712 161 4 18 chr10 9226077 9226356 -136362932 - AluJb SINE Alu -37 275 1 626 37 86 12 chr10 9226356 9226362 -136362926 + (TA)n Simple_repeat Simple_repeat 170 174 0 25 51 0 0 chr10 9228954 9228993 -136360295 + AT_rich Low_complexity Low_complexity 1 39 0 201 211 0 0 chr10 9229356 9229408 -136359880 + GA-rich Low_complexity Low_complexity 2 53 0 380 111 44 0 chr10 9230042 9230132 -136359156 + (TA)n Simple_repeat Simple_repeat 1 94 0 241 295 62 36 chr10 9230255 9230367 -136358921 - MIR SINE MIR -48 214 100 29 0 0 0 chr10 9231665 9231694 -136357594 + AT_rich Low_complexity Low_complexity 1 29 0 2601 161 9 17 chr10 9232153 9232619 -136356669 + MLT1C LTR MaLR 1 462 -5 181 296 0 0 chr10 9232962 9233006 -136356282 + MIR3 SINE MIR 116 159 -49 392 0 21 0 chr10 9233298 9233346 -136355942 + (TG)n Simple_repeat Simple_repeat 2 50 0 3001 196 41 17 chr10 9233388 9234040 -136355248 - L1MD1 LINE L1 0 6242 5575 442 266 62 0 chr10 9234041 9234169 -136355119 + L1MD1 LINE L1 5408 5543 -699 2633 226 41 22 chr10 9234318 9234959 -136354329 - MER82 DNA MER2_type 0 653 1 245 218 18 0 chr10 9235128 9235183 -136354105 - L1MC/D LINE L1 -397 5845 5790 2331 83 0 10 chr10 9235232 9235534 -136353754 + AluY SINE Alu 1 299 -12 256 284 12 0 chr10 9237914 9237995 -136351293 + MIR3 SINE MIR 125 206 -2 234 233 0 0 chr10 9238203 9238263 -136351025 + CT-rich Low_complexity Low_complexity 2 61 0 270 294 29 0 chr10 9238270 9238338 -136350950 - L2 LINE L2 -17 3255 3186 2120 122 0 0 chr10 9238362 9238650 -136350638 - AluSx SINE Alu -24 288 1 475 355 59 16 chr10 9238792 9239164 -136350124 - L2 LINE L2 -455 2859 2472 355 312 18 59 chr10 9240300 9240470 -136348818 + L3 LINE CR1 854 1016 -561 1900 139 20 0 chr10 9240720 9241021 -136348267 + AluSx SINE Alu 1 307 -5 21 0 0 0 chr10 9241395 9241416 -136347872 + AT_rich Low_complexity Low_complexity 1 21 0 2300 50 4 4 chr10 9241848 9242127 -136347161 + AluY SINE Alu 1 279 -32 308 24 0 24 chr10 9242128 9242170 -136347118 + (GAAAA)n Simple_repeat Simple_repeat 2 42 0 240 183 73 73 chr10 9242174 9242256 -136347032 - L2 LINE L2 -12 3260 3179 229 70 23 0 chr10 9242274 9242317 -136346971 - Alu SINE Alu 0 300 257 1180 256 61 28 chr10 9242744 9243205 -136346083 + L1M4 LINE L1 2281 2756 -3390 3961 176 6 6 chr10 9243237 9243934 -136345354 - L1PA16 LINE L1 -7 6159 5463 2523 245 52 50 chr10 9243932 9245074 -136344214 + L1M4 LINE L1 2759 3903 -2243 * 1408 148 4 18 chr10 9245074 9245303 -136343985 - AluJb SINE Alu -86 226 1 697 233 24 38 chr10 9245329 9245539 -136343749 + L1M4 LINE L1 3950 4156 -1990 306 185 25 37 chr10 9245616 9245697 -136343591 + L1MD1 LINE L1 6131 6210 -32 405 0 0 0 chr10 9246051 9246096 -136343192 + (TG)n Simple_repeat Simple_repeat 1 45 0 2296 69 10 0 chr10 9246192 9246481 -136342807 - AluY SINE Alu -15 296 5 26 50 0 0 chr10 9246495 9246535 -136342753 + AT_rich Low_complexity Low_complexity 1 40 0 201 288 0 17 chr10 9246683 9246742 -136342546 + CT-rich Low_complexity Low_complexity 4 61 0 34 24 0 0 chr10 9246755 9246796 -136342492 + AT_rich Low_complexity Low_complexity 1 41 0 23 0 0 0 chr10 9249974 9249997 -136339291 + AT_rich Low_complexity Low_complexity 1 23 0 306 290 113 8 chr10 9250515 9250639 -136338649 + L2 LINE L2 3173 3309 -4 28 29 0 0 chr10 9251059 9251094 -136338194 + AT_rich Low_complexity Low_complexity 1 35 0 407 259 69 8 chr10 9251284 9251415 -136337873 + MIR SINE MIR 124 262 0 297 0 0 0 chr10 9251619 9251652 -136337636 + (TA)n Simple_repeat Simple_repeat 2 34 0 * 336 24 0 0 chr10 9251651 9251692 -136337596 + (GA)n Simple_repeat Simple_repeat 2 42 0 2207 116 3 3 chr10 9252900 9253210 -136336078 - AluSx SINE Alu 0 312 3 297 0 0 0 chr10 9253891 9253924 -136335364 + (CA)n Simple_repeat Simple_repeat 2 34 0 23 33 0 0 chr10 9254538 9254568 -136334720 + AT_rich Low_complexity Low_complexity 1 30 0 1017 185 0 0 chr10 9254951 9255129 -136334159 - AluJb SINE Alu -5 307 130 239 164 36 0 chr10 9255827 9255882 -136333406 + GA-rich Low_complexity Low_complexity 2 58 0 182 356 58 0 chr10 9255974 9256061 -136333227 + MIR3 SINE MIR 87 178 -30 21 0 0 0 chr10 9257321 9257342 -136331946 + AT_rich Low_complexity Low_complexity 1 21 0 21 36 0 0 chr10 9259068 9259096 -136330192 + AT_rich Low_complexity Low_complexity 1 28 0 216 319 124 0 chr10 9260655 9260768 -136328520 + MIR SINE MIR 20 146 -62 21 57 0 0 chr10 9263329 9263364 -136325924 + AT_rich Low_complexity Low_complexity 1 35 0 243 0 0 0 chr10 9264321 9264348 -136324940 + (A)n Simple_repeat Simple_repeat 1 27 0 273 57 0 0 chr10 9264589 9264624 -136324664 + (TC)n Simple_repeat Simple_repeat 2 36 0 321 26 0 0 chr10 9264624 9264662 -136324626 + (CA)n Simple_repeat Simple_repeat 1 38 0 27 0 0 0 chr10 9264662 9264689 -136324599 + AT_rich Low_complexity Low_complexity 1 27 0 453 311 52 52 chr10 9265456 9265668 -136323620 + MIR SINE MIR 15 226 -36 21 36 0 0 chr10 9265988 9266016 -136323272 + AT_rich Low_complexity Low_complexity 1 28 0 642 299 49 47 chr10 9268559 9268924 -136320364 - L1MC/D LINE L1 -2099 5709 5344 336 306 47 57 chr10 9268956 9269149 -136320139 - MIR SINE MIR -70 192 2 22 0 0 0 chr10 9269184 9269206 -136320082 + AT_rich Low_complexity Low_complexity 1 22 0 237 325 65 0 chr10 9269230 9269307 -136319981 - L2 LINE L2 -3 3310 3229 241 194 30 30 chr10 9270098 9270165 -136319123 + MER116 DNA Mariner 1 67 -13 1768 100 0 0 chr10 9270372 9270603 -136318685 + AluSx SINE Alu 1 231 -81 590 99 41 8 chr10 9270631 9270752 -136318536 + GA-rich Low_complexity Low_complexity 4 128 0 31 44 0 0 chr10 9270898 9270943 -136318345 + AT_rich Low_complexity Low_complexity 1 45 0 305 340 77 19 chr10 9271412 9271568 -136317720 + MIR SINE MIR 57 221 -41 27 49 0 0 chr10 9272909 9272950 -136316338 + AT_rich Low_complexity Low_complexity 1 41 0 180 0 0 0 chr10 9273026 9273046 -136316242 + (TTTA)n Simple_repeat Simple_repeat 2 21 0 960 43 0 0 chr10 9273048 9273164 -136316124 - AluY SINE Alu -31 280 165 204 234 0 43 chr10 9273814 9273861 -136315427 + polypyrimidine Low_complexity Low_complexity 4 48 0 1134 261 23 3 chr10 9273938 9274237 -136315051 - L1MC/D LINE L1 -986 5160 4856 2073 192 34 9 chr10 9274249 9274791 -136314497 + L1MA9 LINE L1 4886 5436 -743 1069 148 99 0 chr10 9274794 9274996 -136314292 + L1MA6 LINE L1 6073 6294 -6 3776 145 72 65 chr10 9275086 9275830 -136313458 + L1MA9 LINE L1 5417 6169 -143 360 0 0 0 chr10 9275830 9275870 -136313418 + (CA)n Simple_repeat Simple_repeat 1 40 0 3776 145 72 65 chr10 9275870 9275995 -136313293 + L1MA9 LINE L1 6169 6292 -20 25 31 0 0 chr10 9276011 9276043 -136313245 + AT_rich Low_complexity Low_complexity 1 32 0 518 281 63 53 chr10 9276081 9276397 -136312891 + MER34 LTR ERV1 9 530 -177 5056 178 73 57 chr10 9276397 9276926 -136312362 + L1MCa LINE L1 281 800 -5626 270 0 0 0 chr10 9276926 9276956 -136312332 + (CAA)n Simple_repeat Simple_repeat 1 30 0 5056 178 73 57 chr10 9276956 9276981 -136312307 + L1MCa LINE L1 800 823 -5603 303 28 0 0 chr10 9276981 9277017 -136312271 + (TAAAA)n Simple_repeat Simple_repeat 2 37 0 5056 178 73 57 chr10 9277017 9277714 -136311574 + L1MCa LINE L1 823 1553 -4873 887 241 4 9 chr10 9277706 9277934 -136311354 + L1M4 LINE L1 3909 4135 -2011 * 254 226 97 0 chr10 9279127 9279189 -136310099 - MER63 DNA MER1_type -16 1045 978 264 219 14 41 chr10 9279348 9279421 -136309867 - MER103 DNA DNA -79 87 17 671 296 43 17 chr10 9279464 9279697 -136309591 + MIR SINE MIR 11 249 -13 446 298 60 38 chr10 9280543 9280942 -136308346 + L1ME LINE L1 534 941 -5129 * 1121 241 46 20 chr10 9280940 9281396 -136307892 + L1ME LINE L1 2793 3260 -2820 847 265 58 0 chr10 9281449 9281706 -136307582 + L1ME LINE L1 3537 3808 -2272 1755 215 35 8 chr10 9283003 9283380 -136305908 - MLT1B LTR MaLR 0 390 4 370 264 0 0 chr10 9283910 9283997 -136305291 - L2 LINE L2 0 3272 3186 666 311 104 32 chr10 9284661 9285305 -136303983 + L2 LINE L2 2549 3206 -107 205 169 26 65 chr10 9288092 9288169 -136301119 + CT-rich Low_complexity Low_complexity 5 78 0 5370 172 29 18 chr10 9288408 9289754 -136299534 - L1PA16 LINE L1 -10 6156 4778 1463 209 14 3 chr10 9289754 9290050 -136299238 - AluJb SINE Alu -8 304 6 5370 172 29 18 chr10 9290050 9290548 -136298740 - L1PA16 LINE L1 -1388 4778 4287 21 0 0 0 chr10 9290674 9290695 -136298593 + AT_rich Low_complexity Low_complexity 1 21 0 440 326 73 22 chr10 9290725 9291038 -136298250 + L1MC4a LINE L1 5583 5911 -1897 329 302 135 75 chr10 9291226 9291298 -136297990 + HAL1 LINE L1 4 70 -2437 1652 241 39 22 chr10 9291298 9291792 -136297496 - MLT1D LTR MaLR 0 505 4 329 302 135 75 chr10 9291792 9292090 -136297198 + HAL1 LINE L1 70 396 -2111 999 192 35 13 chr10 9292114 9292343 -136296945 - L1 LINE L1 -1478 4668 4435 4689 183 32 34 chr10 9292910 9294784 -136294504 + L1MA9 LINE L1 4436 6310 -2 22 0 0 0 chr10 9294892 9294914 -136294374 + AT_rich Low_complexity Low_complexity 1 22 0 568 274 129 35 chr10 9295146 9295605 -136293683 + L2 LINE L2 2631 3133 -180 292 343 10 18 chr10 9295719 9295877 -136293411 - MIR SINE MIR -23 185 31 1886 253 92 29 chr10 9296003 9296302 -136292986 - L1ME1 LINE L1 -63 6172 5893 3153 136 10 0 chr10 9296302 9296794 -136292494 - LOR1a LTR ERV1 0 497 1 1886 253 92 29 chr10 9296794 9297264 -136292024 - L1ME1 LINE L1 -342 5893 5354 23 0 0 0 chr10 9297298 9297321 -136291967 + AT_rich Low_complexity Low_complexity 1 23 0 1344 243 147 16 chr10 9297337 9297982 -136291306 - L1ME1 LINE L1 -872 5343 4614 1264 266 55 9 chr10 9297983 9298441 -136290847 - L1ME1 LINE L1 -2120 4095 3617 237 171 86 14 chr10 9298440 9298510 -136290778 - L1M4 LINE L1 -355 5823 5749 * 347 176 83 46 chr10 9298619 9298727 -136290561 - L1ME1 LINE L1 -2904 3311 3200 21 57 0 0 chr10 9298813 9298848 -136290440 + AT_rich Low_complexity Low_complexity 1 35 0 640 230 15 31 chr10 9298860 9299056 -136290232 - L1ME1 LINE L1 -4628 1768 1576 244 180 0 33 chr10 9299053 9299114 -136290174 - L1MA10 LINE L1 -2 6332 6274 * 3671 181 53 16 chr10 9299110 9299401 -136289887 - L1MA9 LINE L1 -224 6088 5809 387 0 0 0 chr10 9299401 9299444 -136289844 + (TA)n Simple_repeat Simple_repeat 2 44 0 3671 181 53 16 chr10 9299444 9299740 -136289548 - L1MA9 LINE L1 -503 5809 5525 198 0 0 0 chr10 9299740 9299762 -136289526 + (TTTTG)n Simple_repeat Simple_repeat 2 23 0 3671 181 53 16 chr10 9299762 9300001 -136289287 - L1MA9 LINE L1 -787 5525 5231 674 171 6 57 chr10 9299999 9300174 -136289114 + L1 LINE L1 4553 4718 -1428 * 650 228 40 61 chr10 9300174 9300402 -136288886 + pTR5 LTR ERV1 743 965 -1473 4540 105 46 75 chr10 9300481 9301332 -136287956 + LTR12 LTR ERV1 1 826 0 1022 153 20 44 chr10 9301332 9301535 -136287753 + L1 LINE L1 4715 4912 -1234 2084 112 3 26 chr10 9301688 9302001 -136287287 - AluSx SINE Alu -6 306 1 334 294 176 78 chr10 9302131 9302145 -136287143 + L2 LINE L2 2306 2317 -997 1025 262 62 53 chr10 9302145 9302595 -136286693 + LTR16A1 LTR ERVL 1 454 -3 334 294 176 78 chr10 9302595 9302927 -136286361 + L2 LINE L2 2317 2686 -628 884 44 0 0 chr10 9303174 9303288 -136286000 + L1PA6 LINE L1 6041 6154 0 678 190 0 8 chr10 9303419 9303540 -136285748 - FLAM_C SINE Alu -17 126 7 21 57 0 0 chr10 9303632 9303667 -136285621 + AT_rich Low_complexity Low_complexity 1 35 0 220 269 0 0 chr10 9306229 9306281 -136283007 + (CA)n Simple_repeat Simple_repeat 2 53 0 2256 89 7 0 chr10 9306873 9307165 -136282123 + AluSc SINE Alu 1 294 -15 354 323 78 5 chr10 9307198 9307379 -136281909 + MIR SINE MIR 20 218 -44 725 164 0 0 chr10 9307564 9307680 -136281608 - AluJb SINE Alu -196 116 1 325 348 28 14 chr10 9309230 9309371 -136279917 + MIR3 SINE MIR 41 183 -25 247 268 141 56 chr10 9310139 9310281 -136279007 - MIR3 SINE MIR -1 207 54 611 331 50 4 chr10 9310393 9310653 -136278635 - L2 LINE L2 -341 2973 2702 976 235 15 0 chr10 9310673 9310877 -136278411 - MER58A DNA MER1_type -16 208 2 328 200 0 13 chr10 9310882 9310957 -136278331 - L2 LINE L2 -615 2699 2626 573 55 0 0 chr10 9311131 9311204 -136278084 + (TTCC)n Simple_repeat Simple_repeat 4 76 0 1993 112 7 0 chr10 9311225 9311521 -136277767 - AluSp SINE Alu -15 298 1 2112 107 7 3 chr10 9312504 9312804 -136276484 + AluSx SINE Alu 1 301 -11 26 30 0 0 chr10 9313378 9313411 -136275877 + AT_rich Low_complexity Low_complexity 1 33 0 252 77 0 0 chr10 9313684 9313723 -136275565 + (TTTTG)n Simple_repeat Simple_repeat 2 40 0 6537 76 12 5 chr10 9313724 9314687 -136274601 - L1PA8 LINE L1 -24 6148 5180 3358 127 45 7 chr10 9314663 9315213 -136274075 + L1P LINE L1 3780 4350 -1796 * 658 53 11 0 chr10 9315248 9315342 -136273946 - L1PA13 LINE L1 -3 6160 6066 270 0 0 0 chr10 9315599 9315629 -136273659 + (TG)n Simple_repeat Simple_repeat 2 31 0 530 55 44 0 chr10 9316094 9316185 -136273103 + (TCTA)n Simple_repeat Simple_repeat 4 98 0 204 200 0 0 chr10 9317421 9317461 -136271827 + GA-rich Low_complexity Low_complexity 2 41 0 249 108 0 0 chr10 9317865 9317902 -136271386 + (TG)n Simple_repeat Simple_repeat 1 37 0 25 51 0 0 chr10 9318152 9318191 -136271097 + AT_rich Low_complexity Low_complexity 1 39 0 196 168 53 18 chr10 9318318 9318431 -136270857 + (TA)n Simple_repeat Simple_repeat 2 118 0 237 192 24 48 chr10 9318442 9318567 -136270721 + (TA)n Simple_repeat Simple_repeat 1 122 0 23 33 0 0 chr10 9318808 9318838 -136270450 + AT_rich Low_complexity Low_complexity 1 30 0 276 258 116 111 chr10 9320392 9320617 -136268671 - L2 LINE L2 0 3313 3088 212 361 18 54 chr10 9320635 9320801 -136268487 - L2 LINE L2 -445 2869 2710 6249 78 29 3 chr10 9320801 9321712 -136267576 + L1PA7 LINE L1 5223 6155 0 263 325 24 29 chr10 9321712 9321918 -136267370 + HAL1b LINE L1 378 582 -766 276 271 44 92 chr10 9322070 9322321 -136266967 + L1MC5 LINE L1 7289 7527 -434 357 333 46 6 chr10 9322427 9322601 -136266687 + L1ME3A LINE L1 5990 6170 0 325 284 82 22 chr10 9323284 9323418 -136265870 + MIR SINE MIR 51 192 -70 305 339 92 30 chr10 9323577 9323872 -136265416 - L1ME4a LINE L1 -184 5937 5625 1608 201 7 3 chr10 9325020 9325329 -136263959 + AluJb SINE Alu 1 310 0 219 316 53 42 chr10 9326347 9326442 -136262846 - L2 LINE L2 -21 3292 3197 377 317 129 12 chr10 9326583 9326970 -136262318 - L2 LINE L2 -407 2907 2413 1226 301 22 26 chr10 9326980 9327354 -136261934 + L2 LINE L2 2347 2720 -594 2214 117 0 0 chr10 9327354 9327653 -136261635 + AluSg SINE Alu 1 299 -11 1226 301 22 26 chr10 9327653 9327740 -136261548 + L2 LINE L2 2720 2806 -508 287 296 136 30 chr10 9327772 9327971 -136261317 - L2 LINE L2 -961 2353 2134 574 288 127 76 chr10 9327971 9328459 -136260829 + MLT1E LTR MaLR 1 558 -9 352 262 23 113 chr10 9328610 9328866 -136260422 - L2 LINE L2 -1819 1495 1263 2043 118 14 0 chr10 9329472 9329772 -136259516 + AluSx SINE Alu 1 304 0 218 385 10 26 chr10 9329775 9329967 -136259321 + L2 LINE L2 1767 1955 -1359 184 235 118 24 chr10 9330359 9330444 -136258844 + L2 LINE L2 1991 2083 -1231 2841 303 54 42 chr10 9330852 9332274 -136257014 + L2 LINE L2 1797 3235 -78 396 319 129 12 chr10 9332837 9333000 -136256288 + MIR3 SINE MIR 16 197 -11 2231 108 3 6 chr10 9333490 9333841 -136255447 - L1P LINE L1 -794 5352 5003 1217 47 0 0 chr10 9333856 9334039 -136255249 + L1PA4 LINE L1 5996 6178 0 362 346 55 11 chr10 9334267 9334449 -136254839 + MIR3 SINE MIR 10 199 -9 459 278 8 32 chr10 9335853 9335979 -136253309 - MIR SINE MIR 0 262 140 1029 201 65 76 chr10 9336525 9336894 -136252394 + MLT1A1 LTR MaLR 1 365 0 266 310 26 26 chr10 9337023 9337139 -136252149 - MIR SINE MIR -116 146 31 3318 111 16 2 chr10 9337361 9337858 -136251430 + L1PA15 LINE L1 5662 6165 0 2431 86 0 0 chr10 9338551 9338854 -136250434 - AluSg SINE Alu -7 303 1 603 296 49 16 chr10 9338963 9339270 -136250018 - L1ME4a LINE L1 -207 5914 5598 809 285 139 30 chr10 9339969 9340442 -136248846 - MLT1L LTR MaLR -1 614 90 1721 96 4 0 chr10 9340466 9340696 -136248592 + AluSg/x SINE Alu 74 304 -6 243 0 0 0 chr10 9341163 9341190 -136248098 + (A)n Simple_repeat Simple_repeat 1 27 0 455 313 98 27 chr10 9342077 9342301 -136246987 + MIR SINE MIR 2 241 -21 1936 135 0 0 chr10 9342740 9343044 -136246244 - AluSx SINE Alu 0 304 1 703 140 29 0 chr10 9343123 9343259 -136246029 + (CTTTA)n Simple_repeat Simple_repeat 2 141 0 2207 90 3 3 chr10 9343259 9343559 -136245729 - AluSg SINE Alu -10 300 1 537 282 153 5 chr10 9343647 9343863 -136245425 + MIR SINE MIR 14 261 -1 1809 117 48 31 chr10 9344428 9344549 -136244739 + AluSx SINE Alu 1 118 -194 198 0 0 0 chr10 9344549 9344571 -136244717 + (TAA)n Simple_repeat Simple_repeat 2 23 0 1809 117 48 31 chr10 9344571 9344739 -136244549 + AluSx SINE Alu 118 295 -17 232 182 0 0 chr10 9345680 9345724 -136243564 - MIR SINE MIR -109 153 110 27 62 0 0 chr10 9348749 9348797 -136240491 + AT_rich Low_complexity Low_complexity 1 48 0 25 31 0 0 chr10 9349174 9349206 -136240082 + AT_rich Low_complexity Low_complexity 1 32 0 25 90 0 0 chr10 9349483 9349550 -136239738 + AT_rich Low_complexity Low_complexity 1 67 0 357 24 0 0 chr10 9349767 9349809 -136239479 + (TG)n Simple_repeat Simple_repeat 2 43 0 414 0 0 0 chr10 9350714 9350760 -136238528 + (CA)n Simple_repeat Simple_repeat 1 46 0 1256 187 103 54 chr10 9352162 9352272 -136237016 - MER7A DNA MER2_type -2693 345 242 2268 62 0 0 chr10 9352272 9352548 -136236740 + AluY SINE Alu 1 276 -35 275 64 0 21 chr10 9352549 9352596 -136236692 + (CAAAA)n Simple_repeat Simple_repeat 1 46 0 1256 187 103 54 chr10 9352596 9352814 -136236474 - MER7A DNA MER2_type -2795 243 1 22 35 0 0 chr10 9353777 9353806 -136235482 + AT_rich Low_complexity Low_complexity 1 29 0 548 233 0 6 chr10 9353990 9354153 -136235135 + (TA)n Simple_repeat Simple_repeat 1 162 0 365 104 83 23 chr10 9356380 9356640 -136232648 + (TA)n Simple_repeat Simple_repeat 1 275 0 1419 117 206 8 chr10 9356688 9356936 -136232352 + AluSg1 SINE Alu 1 297 -12 26 74 0 0 chr10 9357269 9357323 -136231965 + AT_rich Low_complexity Low_complexity 1 54 0 216 0 0 0 chr10 9357753 9357777 -136231511 + (TCTA)n Simple_repeat Simple_repeat 4 27 0 2098 97 0 63 chr10 9357788 9358119 -136231169 - AluSx SINE Alu -2 310 1 1296 159 0 9 chr10 9358241 9358461 -136230827 - AluJb SINE Alu 0 312 95 210 260 14 0 chr10 9358555 9358628 -136230660 + (TA)n Simple_repeat Simple_repeat 1 74 0 21 36 0 0 chr10 9359197 9359225 -136230063 + AT_rich Low_complexity Low_complexity 1 28 0 2138 41 0 4 chr10 9359794 9360063 -136229225 + L1PA3 LINE L1 5888 6155 0 2135 119 7 3 chr10 9360314 9360617 -136228671 - AluSq SINE Alu -9 304 1 215 59 0 29 chr10 9360668 9360702 -136228586 + (TG)n Simple_repeat Simple_repeat 2 34 0 2081 102 3 23 chr10 9360753 9361056 -136228232 + AluSc SINE Alu 2 298 -11 24 0 0 0 chr10 9361096 9361120 -136228168 + AT_rich Low_complexity Low_complexity 1 24 0 288 200 0 0 chr10 9361232 9361302 -136227986 + (TATATG)n Simple_repeat Simple_repeat 5 74 0 215 123 0 53 chr10 9361445 9361502 -136227786 + (TA)n Simple_repeat Simple_repeat 2 55 0 741 156 0 0 chr10 9361900 9362028 -136227260 + AluSg/x SINE Alu 184 311 -1 311 210 25 103 chr10 9362779 9362929 -136226359 + HAL1b LINE L1 387 483 -865 2111 92 0 0 chr10 9363322 9363594 -136225694 - AluSg SINE Alu -4 306 35 22 56 0 0 chr10 9363960 9363996 -136225292 + AT_rich Low_complexity Low_complexity 1 36 0 248 315 61 44 chr10 9364041 9364222 -136225066 + MIR SINE MIR 53 236 -26 1921 82 90 4 chr10 9364612 9364879 -136224409 - AluSc SINE Alu -17 292 3 236 357 8 23 chr10 9364932 9365061 -136224227 + MIR3 SINE MIR 40 166 -42 2152 147 65 20 chr10 9365085 9365486 -136223802 + MSTB LTR MaLR 8 426 0 269 306 68 34 chr10 9365922 9366069 -136223219 + MIR3 SINE MIR 32 183 -25 27 0 0 0 chr10 9367237 9367264 -136222024 + AT_rich Low_complexity Low_complexity 1 27 0 460 329 55 21 chr10 9367944 9368181 -136221107 - MIR SINE MIR -16 246 2 361 315 94 71 chr10 9368718 9368972 -136220316 + HAL1 LINE L1 56 315 -2192 646 248 59 101 chr10 9369362 9370003 -136219285 + HAL1 LINE L1 861 1474 -1033 634 220 8 0 chr10 9370004 9370122 -136219166 + FLAM_C SINE Alu 2 120 -13 527 234 48 8 chr10 9370122 9370246 -136219042 + MER58B DNA MER1_type 181 309 -32 241 329 0 14 chr10 9372514 9372584 -136216704 - L2 LINE L2 -18 3254 3186 220 256 64 0 chr10 9372858 9372936 -136216352 + MIR SINE MIR 124 206 -56 2143 68 37 17 chr10 9373084 9373380 -136215908 - AluY SINE Alu -9 302 1 735 263 36 0 chr10 9373439 9373633 -136215655 - MIR SINE MIR -40 222 22 297 0 0 0 chr10 9374669 9374702 -136214586 + (CA)n Simple_repeat Simple_repeat 2 34 0 2152 88 0 18 chr10 9374703 9375017 -136214271 - AluY SINE Alu 0 309 1 260 227 0 82 chr10 9375021 9375118 -136214170 - L1M4 LINE L1 -981 5165 5077 1171 186 53 19 chr10 9375449 9375713 -136213575 + L1 LINE L1 4128 4400 -1746 318 164 0 0 chr10 9375825 9375880 -136213408 - MLT1H LTR MaLR -4 545 491 1311 193 3 67 chr10 9376727 9377027 -136212261 - AluJo SINE Alu -27 285 5 228 35 0 0 chr10 9377051 9377080 -136212208 + (TG)n Simple_repeat Simple_repeat 2 30 0 210 243 40 14 chr10 9377478 9377552 -136211736 - MIR SINE MIR -11 251 176 1736 72 38 0 chr10 9377719 9377955 -136211333 - L1PA7 LINE L1 -11 6143 5899 252 185 0 0 chr10 9378476 9378530 -136210758 + T-rich Low_complexity Low_complexity 1 54 0 498 361 61 4 chr10 9378843 9379073 -136210215 + MIR SINE MIR 2 244 -18 2269 144 67 8 chr10 9379178 9379580 -136209708 - MSTA LTR MaLR 0 428 3 231 329 49 63 chr10 9379758 9379901 -136209387 + L2 LINE L2 3132 3272 0 1520 181 21 91 chr10 9380204 9380445 -136208843 - MLT1B LTR MaLR 0 390 189 438 20 0 0 chr10 9380445 9380496 -136208792 + (TG)n Simple_repeat Simple_repeat 2 52 0 1520 181 21 91 chr10 9380496 9380673 -136208615 - MLT1B LTR MaLR -201 189 1 182 283 28 75 chr10 9381268 9381362 -136207926 - L2 LINE L2 -537 2777 2687 1826 163 0 10 chr10 9381362 9381657 -136207631 + AluJb SINE Alu 1 292 -20 182 283 28 75 chr10 9381657 9381668 -136207620 - L2 LINE L2 -627 2687 2677 293 309 100 0 chr10 9382398 9382508 -136206780 - MER103 DNA DNA -2 164 44 7185 33 2 0 chr10 9382538 9383396 -136205892 + L1PA5 LINE L1 5287 6146 -8 3264 128 27 19 chr10 9384609 9385132 -136204156 - MER1A DNA MER1_type 0 527 1 1830 117 0 78 chr10 9385612 9385941 -136203347 + AluSx SINE Alu 1 305 0 858 199 17 6 chr10 9386275 9386451 -136202837 - AluJb SINE Alu -5 307 130 644 324 65 16 chr10 9386492 9386739 -136202549 + MIR SINE MIR 4 262 0 506 275 31 25 chr10 9388450 9388610 -136200678 - MIR SINE MIR -10 252 92 25 51 0 0 chr10 9389798 9389837 -136199451 + AT_rich Low_complexity Low_complexity 1 39 0 26 30 0 0 chr10 9389909 9389942 -136199346 + AT_rich Low_complexity Low_complexity 1 33 0 4175 190 44 54 chr10 9389946 9390965 -136198323 - L1MB2 LINE L1 -3 6168 5188 2262 95 23 0 chr10 9390965 9391270 -136198018 - AluSx SINE Alu 0 312 1 4175 190 44 54 chr10 9391270 9391541 -136197747 - L1MB2 LINE L1 -983 5188 4916 654 298 36 0 chr10 9391630 9391882 -136197406 - MIR SINE MIR 0 262 2 250 203 14 14 chr10 9391920 9391994 -136197294 + CT-rich Low_complexity Low_complexity 2 75 0 303 181 0 0 chr10 9393828 9393900 -136195388 + GA-rich Low_complexity Low_complexity 1 72 0 24 0 0 0 chr10 9394384 9394408 -136194880 + AT_rich Low_complexity Low_complexity 1 24 0 983 174 25 5 chr10 9396014 9396215 -136193073 - L1MA5A LINE L1 -3 6294 6090 1507 177 50 4 chr10 9396821 9397148 -136192140 - AluJb SINE Alu 0 312 15 323 291 73 33 chr10 9397691 9397842 -136191446 + MER5A DNA MER1_type 1 157 -32 386 333 15 0 chr10 9398088 9398220 -136191068 + L2 LINE L2 3180 3313 0 182 185 0 74 chr10 9398483 9398537 -136190751 - L3 LINE CR1 -1221 356 307 25 0 0 0 chr10 9398681 9398706 -136190582 + AT_rich Low_complexity Low_complexity 1 25 0 1671 159 7 42 chr10 9398706 9399014 -136190274 - AluJo SINE Alu -15 297 1 1448 113 216 9 chr10 9400276 9400531 -136188757 - AluSg1 SINE Alu 0 305 3 454 280 37 53 chr10 9402406 9402595 -136186693 + MIR SINE MIR 21 206 -56 706 226 60 3 chr10 9402616 9402809 -136186479 + L1MA8 LINE L1 6086 6275 -16 1958 193 48 7 chr10 9402926 9403341 -136185947 + MSTB1 LTR MaLR 1 432 0 8889 192 14 10 chr10 9403341 9404972 -136184316 + MSTB-int LTR MaLR 1 1637 -14 2056 204 36 2 chr10 9404983 9405395 -136183893 + MSTB LTR MaLR 1 426 0 269 360 9 9 chr10 9405558 9405672 -136183616 - MIR SINE MIR -71 191 78 892 221 43 14 chr10 9405981 9406189 -136183099 + MST-int LTR MaLR 562 775 -876 180 0 0 0 chr10 9406800 9406820 -136182468 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 204 196 18 18 chr10 9408010 9408066 -136181222 + (TAAA)n Simple_repeat Simple_repeat 2 57 0 2712 187 8 2 chr10 9408178 9408703 -136180585 - L1 LINE L1 -1004 5142 4615 221 96 115 0 chr10 9408986 9409038 -136180250 + (ATATG)n Simple_repeat Simple_repeat 3 60 0 367 388 76 20 chr10 9409160 9409464 -136179824 - L1MEd LINE L1 -5556 563 243 459 257 79 50 chr10 9410032 9410172 -136179116 + MLT1G1 LTR MaLR 448 591 -4 186 312 143 0 chr10 9410375 9410452 -136178836 + L3 LINE CR1 1058 1145 -432 21 0 0 0 chr10 9410953 9410974 -136178314 + AT_rich Low_complexity Low_complexity 1 21 0 348 325 41 0 chr10 9411175 9411298 -136177990 - L2 LINE L2 -9 3304 3177 2316 81 10 3 chr10 9412431 9412728 -136176560 - AluSg SINE Alu -11 299 1 1023 209 4 31 chr10 9412818 9413043 -136176245 + MER20 DNA MER1_type 1 219 0 379 295 108 66 chr10 9413477 9413735 -136175553 - L3 LINE CR1 -2 1575 1307 21 0 0 0 chr10 9414559 9414580 -136174708 + AT_rich Low_complexity Low_complexity 1 21 0 298 260 149 19 chr10 9415146 9415300 -136173988 - MLT1J1 LTR MaLR -272 174 1 2551 97 39 8 chr10 9415757 9416147 -136173141 - L1PA12 LINE L1 -2 6166 5765 556 341 159 24 chr10 9416147 9416726 -136172562 + L2 LINE L2 2661 3313 0 528 101 13 0 chr10 9416878 9416957 -136172331 - MADE1 DNA Mariner 0 80 1 2155 104 7 20 chr10 9418301 9418599 -136170689 + AluSx SINE Alu 1 294 -18 646 345 47 45 chr10 9419998 9420506 -136168782 - HERV16 LTR ERVL -2921 2075 1567 2387 80 10 0 chr10 9420756 9421055 -136168233 - AluSc SINE Alu -7 302 1 211 329 14 0 chr10 9423090 9423160 -136166128 + (TG)n Simple_repeat Simple_repeat 1 71 0 1928 167 0 0 chr10 9425235 9425535 -136163753 - AluSx SINE Alu -12 300 1 1849 132 50 63 chr10 9425742 9426122 -136163166 - THE1C LTR MaLR 0 375 1 4148 110 86 95 chr10 9426767 9428160 -136161128 + pTR5 LTR ERV1 66 2438 0 2056 104 30 7 chr10 9428429 9428726 -136160562 + AluSx SINE Alu 1 304 -8 345 292 17 25 chr10 9428728 9428848 -136160440 - MER5B DNA MER1_type -59 119 1 193 243 84 65 chr10 9430235 9430342 -136158946 + L2 LINE L2 3200 3308 -5 26 0 0 0 chr10 9431081 9431107 -136158181 + AT_rich Low_complexity Low_complexity 1 26 0 560 247 78 119 chr10 9432380 9432731 -136156557 + L1ME LINE L1 11 328 -5742 1832 174 96 34 chr10 9432731 9433138 -136156150 + MSTB1 LTR MaLR 1 432 0 560 247 78 119 chr10 9433138 9433390 -136155898 + L1ME LINE L1 328 589 -5481 763 186 0 0 chr10 9433556 9433680 -136155608 - FLAM_C SINE Alu -19 124 1 2891 280 91 30 chr10 9433680 9436296 -136152992 + L1ME LINE L1 777 3568 -2512 1667 169 72 6 chr10 9436342 9436690 -136152598 + L1MA8 LINE L1 5808 6178 -113 854 205 0 0 chr10 9436857 9437008 -136152280 - FRAM SINE Alu -15 151 1 24 0 0 0 chr10 9437008 9437032 -136152256 + AT_rich Low_complexity Low_complexity 1 24 0 1355 165 0 38 chr10 9437044 9437281 -136152007 - AluJo SINE Alu -84 228 1 2639 33 0 0 chr10 9437856 9438162 -136151126 - AluY SINE Alu -5 306 1 25 0 0 0 chr10 9439802 9439827 -136149461 + AT_rich Low_complexity Low_complexity 1 25 0 1331 216 78 58 chr10 9440779 9441140 -136148148 - MLT1A2 LTR MaLR -1 373 6 459 236 121 50 chr10 9441290 9441472 -136147816 - MIR SINE MIR -27 235 41 451 207 12 18 chr10 9443156 9443325 -136145963 + (TA)n Simple_repeat Simple_repeat 2 169 0 213 180 0 0 chr10 9443364 9443414 -136145874 + (CATA)n Simple_repeat Simple_repeat 2 51 0 2139 99 20 3 chr10 9445060 9445354 -136143934 + AluSg SINE Alu 1 299 -11 319 303 47 57 chr10 9446225 9446436 -136142852 + HAL1b LINE L1 439 647 -701 27 0 0 0 chr10 9446564 9446591 -136142697 + AT_rich Low_complexity Low_complexity 1 27 0 339 300 96 33 chr10 9447193 9447433 -136141855 - MIR SINE MIR 0 262 8 392 308 0 0 chr10 9447462 9447566 -136141722 + L2 LINE L2 3210 3313 0 2005 115 14 0 chr10 9448444 9448774 -136140514 + AluSx SINE Alu 1 334 0 487 104 0 0 chr10 9448873 9448950 -136140338 - Alu SINE Alu -5 305 229 369 0 0 0 chr10 9450093 9450106 -136139182 + (CA)n Simple_repeat Simple_repeat 1 54 0 369 0 0 0 chr10 9450106 9450147 -136139141 + (CA)n Simple_repeat Simple_repeat 2 42 0 920 105 8 0 chr10 9451153 9451277 -136138011 - AluSx SINE Alu -24 286 162 742 133 0 9 chr10 9451277 9451390 -136137898 - AluSx SINE Alu -200 112 1 25 51 0 0 chr10 9452072 9452111 -136137177 + AT_rich Low_complexity Low_complexity 1 39 0 24 0 0 0 chr10 9453685 9453709 -136135579 + AT_rich Low_complexity Low_complexity 1 24 0 27 49 0 0 chr10 9454433 9454474 -136134814 + AT_rich Low_complexity Low_complexity 1 41 0 22 70 0 0 chr10 9454719 9454762 -136134526 + AT_rich Low_complexity Low_complexity 1 43 0 1616 125 29 11 chr10 9455194 9455466 -136133822 + Tigger7 DNA MER2_type 2311 2587 0 27 87 0 0 chr10 9456290 9456359 -136132929 + AT_rich Low_complexity Low_complexity 1 69 0 625 286 95 62 chr10 9457135 9457874 -136131414 - LTR41 LTR ERVL -10 763 1 1230 164 9 14 chr10 9458025 9458244 -136131044 - MER46A DNA MER2_type 0 236 19 773 255 106 64 chr10 9458332 9458708 -136130580 + MLT1J LTR MaLR 79 470 -41 417 177 26 9 chr10 9458818 9458931 -136130357 + CT-rich Low_complexity Low_complexity 3 117 0 1858 156 7 14 chr10 9458933 9459228 -136130060 - AluSq SINE Alu -20 293 1 1097 295 87 2 chr10 9459616 9460009 -136129279 + LTR16A LTR ERVL 22 447 -3 2805 13 0 3 chr10 9460500 9460812 -136128476 + AluYa5 SINE Alu 1 311 0 25 51 0 0 chr10 9461185 9461224 -136128064 + AT_rich Low_complexity Low_complexity 1 39 0 284 332 103 18 chr10 9461673 9461896 -136127392 + MIR SINE MIR 15 256 -6 22 0 0 0 chr10 9462791 9462813 -136126475 + AT_rich Low_complexity Low_complexity 1 22 0 1964 106 32 3 chr10 9464865 9465149 -136124139 + AluSq SINE Alu 1 292 -21 189 0 0 0 chr10 9465446 9465467 -136123821 + (TAA)n Simple_repeat Simple_repeat 3 23 0 272 254 0 15 chr10 9465469 9465536 -136123752 + MLT1E1-int LTR MaLR 1135 1200 -171 1889 223 110 43 chr10 9465649 9466259 -136123029 + MLT1E1 LTR MaLR 1 651 -3 21 0 0 0 chr10 9466730 9466751 -136122537 + AT_rich Low_complexity Low_complexity 1 21 0 21 71 0 0 chr10 9467401 9467443 -136121845 + AT_rich Low_complexity Low_complexity 1 42 0 254 319 30 30 chr10 9467640 9467775 -136121513 - L2 LINE L2 -2 3270 3136 342 0 0 0 chr10 9468275 9468313 -136120975 + (TG)n Simple_repeat Simple_repeat 2 39 0 247 300 0 67 chr10 9469053 9469173 -136120115 - MIR SINE MIR -50 212 101 248 318 190 11 chr10 9469500 9469679 -136119609 + MIR SINE MIR 10 220 -42 223 225 0 0 chr10 9471051 9471091 -136118197 + MIR SINE MIR 48 87 -175 226 316 82 0 chr10 9472205 9472303 -136116985 + MIR SINE MIR 19 124 -84 267 93 0 0 chr10 9478552 9478595 -136110693 + (A)n Simple_repeat Simple_repeat 1 43 0 24 0 0 0 chr10 9479451 9479475 -136109813 + AT_rich Low_complexity Low_complexity 1 24 0 441 272 88 8 chr10 9479813 9479938 -136109350 + MIR3 SINE MIR 42 176 -32 21 71 0 0 chr10 9480060 9480102 -136109186 + AT_rich Low_complexity Low_complexity 1 42 0 226 163 23 0 chr10 9480527 9480570 -136108718 + LTR8A LTR ERV1 207 250 -477 186 43 0 0 chr10 9481474 9481497 -136107791 + (A)n Simple_repeat Simple_repeat 1 23 0 207 0 0 0 chr10 9481500 9481523 -136107765 + (CAGGC)n Simple_repeat Simple_repeat 5 27 0 25 31 0 0 chr10 9483566 9483598 -136105690 + AT_rich Low_complexity Low_complexity 1 32 0 193 323 38 113 chr10 9484175 9484361 -136104927 - MIR SINE MIR -66 196 25 514 288 29 0 chr10 9485108 9485247 -136104041 - MIR SINE MIR -1 261 119 276 91 0 0 chr10 9485259 9485303 -136103985 + (TA)n Simple_repeat Simple_repeat 2 45 0 297 315 67 17 chr10 9485666 9485844 -136103444 - HAL1 LINE L1 -1112 1395 1209 333 0 0 0 chr10 9486034 9486071 -136103217 + (TG)n Simple_repeat Simple_repeat 2 38 0 264 39 19 39 chr10 9486328 9486380 -136102908 + (TTTTG)n Simple_repeat Simple_repeat 2 52 0 2328 71 4 0 chr10 9486382 9486663 -136102625 - AluY SINE Alu -29 282 1 2493 255 40 69 chr10 9488190 9489251 -136100037 + L1MEc LINE L1 29 1059 -5337 989 205 10 29 chr10 9489263 9489468 -136099820 + MLT1D LTR MaLR 1 201 -304 185 65 32 0 chr10 9489469 9489500 -136099788 + (TTTC)n Simple_repeat Simple_repeat 3 34 0 287 111 42 14 chr10 9489532 9489604 -136099684 + CT-rich Low_complexity Low_complexity 3 76 0 886 236 34 61 chr10 9489604 9489668 -136099620 + MLT1D LTR MaLR 214 278 -227 2120 129 7 0 chr10 9489668 9489971 -136099317 + AluSq SINE Alu 1 305 -8 886 236 34 61 chr10 9489971 9490203 -136099085 + MLT1D LTR MaLR 278 502 -3 689 280 70 14 chr10 9490204 9490490 -136098798 + L1MEc LINE L1 1072 1373 -5023 963 272 191 8 chr10 9490585 9491187 -136098101 + L1MEc LINE L1 1552 2263 -4133 32 57 0 0 chr10 9491195 9491248 -136098040 + AT_rich Low_complexity Low_complexity 1 53 0 21 36 0 0 chr10 9491515 9491543 -136097745 + AT_rich Low_complexity Low_complexity 1 28 0 255 327 26 9 chr10 9491544 9491657 -136097631 + L2 LINE L2 2274 2388 -926 6512 200 19 16 chr10 9491966 9493983 -136095305 + L1MA2 LINE L1 3176 5203 -2362 2474 192 12 2 chr10 9493981 9494475 -136094813 + L1MA2 LINE L1 6041 6539 -1026 * 2178 111 3 6 chr10 9494458 9494774 -136094514 + L1MA2 LINE L1 6894 7208 -515 * 347 179 17 103 chr10 9495064 9495181 -136094107 + MER112 DNA MER1_type 2 108 -152 2489 132 2 32 chr10 9495198 9495504 -136093784 + L1MA2 LINE L1 7190 7481 -242 2485 71 0 0 chr10 9495504 9495814 -136093474 + AluSg SINE Alu 1 310 0 2489 132 2 32 chr10 9495814 9495946 -136093342 + L1MA2 LINE L1 7481 7615 -108 26 0 0 0 chr10 9496077 9496103 -136093185 + AT_rich Low_complexity Low_complexity 1 26 0 2309 97 3 0 chr10 9498489 9498797 -136090491 - AluY SINE Alu -2 309 1 186 133 0 0 chr10 9499026 9499056 -136090232 + (T)n Simple_repeat Simple_repeat 1 30 0 1156 117 0 0 chr10 9499772 9499935 -136089353 + AluSq SINE Alu 137 299 -14 181 341 55 82 chr10 9499950 9500243 -136089045 - L2 LINE L2 -2 3270 2986 21 36 0 0 chr10 9501705 9501733 -136087555 + AT_rich Low_complexity Low_complexity 1 28 0 1703 96 17 0 chr10 9502622 9502861 -136086427 - L1PA10 LINE L1 -14 6154 5912 311 325 0 0 chr10 9503299 9503382 -136085906 + L2 LINE L2 2225 2307 -1007 445 325 64 11 chr10 9503461 9503649 -136085639 + MIR SINE MIR 65 262 0 226 363 11 28 chr10 9503661 9503840 -136085448 + L2 LINE L2 2323 2498 -816 185 360 88 20 chr10 9503940 9504087 -136085201 + L2 LINE L2 2631 2787 -527 23 68 0 0 chr10 9504597 9504641 -136084647 + AT_rich Low_complexity Low_complexity 1 44 0 255 336 153 15 chr10 9507422 9507559 -136081729 + L2 LINE L2 3116 3271 -1 211 179 36 0 chr10 9508562 9508618 -136080670 + (TA)n Simple_repeat Simple_repeat 2 59 0 21 0 0 0 chr10 9509720 9509741 -136079547 + AT_rich Low_complexity Low_complexity 1 21 0 531 0 0 0 chr10 9511220 9511279 -136078009 + (CA)n Simple_repeat Simple_repeat 2 60 0 1899 86 3 86 chr10 9511286 9511590 -136077698 - AluSg SINE Alu -31 279 1 1317 177 50 0 chr10 9512051 9512361 -136076927 - L1P LINE L1 -759 5406 5086 3300 107 2 4 chr10 9512361 9512855 -136076433 + L1PA13 LINE L1 5669 6163 0 235 149 0 30 chr10 9513420 9513487 -136075801 + (CA)n Simple_repeat Simple_repeat 2 66 0 23 33 0 0 chr10 9514198 9514228 -136075060 + AT_rich Low_complexity Low_complexity 1 30 0 2801 179 21 40 chr10 9514932 9515973 -136073315 - L1MA10 LINE L1 -373 5795 4781 266 208 0 0 chr10 9515970 9516023 -136073265 + L1MA10 LINE L1 5786 5838 -474 * 191 61 30 0 chr10 9516028 9516061 -136073227 + (TTTTTG)n Simple_repeat Simple_repeat 3 36 0 6451 102 32 110 chr10 9516065 9517489 -136071799 - SVA Other Other -17 1369 57 917 106 0 22 chr10 9517489 9517669 -136071619 + (GGGAGA)n Simple_repeat Simple_repeat 5 180 0 1969 212 56 30 chr10 9517774 9518125 -136071163 + L1MA10 LINE L1 5820 6190 -144 1989 117 22 0 chr10 9518125 9518420 -136070868 + AluSq SINE Alu 5 305 0 1969 212 56 30 chr10 9518420 9518568 -136070720 + L1MA10 LINE L1 6190 6333 -1 189 0 0 0 chr10 9518873 9518894 -136070394 + (CCA)n Simple_repeat Simple_repeat 2 22 0 700 271 140 13 chr10 9519476 9519705 -136069583 + MIR SINE MIR 5 262 0 180 0 0 0 chr10 9519993 9520013 -136069275 + (TG)n Simple_repeat Simple_repeat 2 21 0 333 0 0 0 chr10 9520248 9520285 -136069003 + (TG)n Simple_repeat Simple_repeat 2 38 0 1998 136 0 3 chr10 9520286 9520572 -136068716 - AluSx SINE Alu -27 285 1 329 321 78 10 chr10 9520902 9521095 -136068193 + L1MC4a LINE L1 5791 5996 -1812 228 68 0 68 chr10 9522195 9522254 -136067034 + (TTTTTG)n Simple_repeat Simple_repeat 2 56 0 2135 100 4 0 chr10 9522879 9523183 -136066105 + AluSx SINE Alu 13 317 0 387 0 0 0 chr10 9523500 9523543 -136065745 + (TTA)n Simple_repeat Simple_repeat 2 44 0 2776 104 15 5 chr10 9523545 9523947 -136065341 - L1PA11 LINE L1 -15 6159 5754 26 0 0 0 chr10 9524973 9524999 -136064289 + AT_rich Low_complexity Low_complexity 1 26 0 439 261 56 0 chr10 9526269 9526411 -136062877 - MER104 DNA Tc2 -30 150 1 2401 80 0 19 chr10 9526454 9526765 -136062523 - AluSg1 SINE Alu -4 305 1 616 184 0 0 chr10 9527399 9527502 -136061786 - FLAM_A SINE Alu -18 124 22 30 0 0 0 chr10 9529596 9529626 -136059662 + AT_rich Low_complexity Low_complexity 1 30 0 186 43 0 0 chr10 9529659 9529682 -136059606 + (CAAAA)n Simple_repeat Simple_repeat 5 27 0 23 0 0 0 chr10 9530567 9530590 -136058698 + AT_rich Low_complexity Low_complexity 1 23 0 316 295 14 65 chr10 9530912 9531051 -136058237 - L2 LINE L2 0 3313 3182 394 301 51 59 chr10 9531646 9531882 -136057406 + L2 LINE L2 3072 3305 -8 407 216 21 21 chr10 9532009 9532106 -136057182 - MLT1J2 LTR MaLR -284 166 70 768 136 0 64 chr10 9532115 9532255 -136057033 + FLAM_C SINE Alu 3 133 0 24 0 0 0 chr10 9532712 9532736 -136056552 + AT_rich Low_complexity Low_complexity 1 24 0 263 279 37 62 chr10 9533098 9533245 -136056043 + L2 LINE L2 3156 3300 -13 216 67 0 0 chr10 9533245 9533275 -136056013 + (TGAA)n Simple_repeat Simple_repeat 1 30 0 263 279 37 62 chr10 9533275 9533288 -136056000 + L2 LINE L2 3300 3312 -1 186 103 0 0 chr10 9533376 9533405 -136055883 + (TC)n Simple_repeat Simple_repeat 2 30 0 248 277 74 74 chr10 9533777 9533979 -136055309 - MER112 DNA MER1_type -9 251 50 601 277 66 21 chr10 9535546 9535788 -136053500 + MIR SINE MIR 10 262 0 41 48 0 0 chr10 9535954 9536016 -136053272 + AT_rich Low_complexity Low_complexity 1 62 0 332 211 28 110 chr10 9536026 9536060 -136053228 + MARNA DNA Mariner 119 154 -432 264 59 0 0 chr10 9536060 9536094 -136053194 + (TA)n Simple_repeat Simple_repeat 2 35 0 2056 112 14 11 chr10 9536094 9536381 -136052907 - AluSq SINE Alu -25 288 1 332 211 28 110 chr10 9536381 9536454 -136052834 + MARNA DNA Mariner 152 218 -368 3326 136 20 36 chr10 9536462 9536746 -136052542 + L1MA8 LINE L1 5668 5955 -336 2224 100 0 3 chr10 9536746 9537037 -136052251 + AluSg SINE Alu 6 295 -15 3326 136 20 36 chr10 9537037 9537386 -136051902 + L1MA8 LINE L1 5955 6291 0 879 254 5 10 chr10 9537579 9537788 -136051500 - MER58A DNA MER1_type -16 208 1 495 294 44 6 chr10 9538298 9538458 -136050830 - MIR3 SINE MIR -11 197 32 21 0 0 0 chr10 9539556 9539577 -136049711 + AT_rich Low_complexity Low_complexity 1 21 0 23 54 0 0 chr10 9540728 9540765 -136048523 + AT_rich Low_complexity Low_complexity 1 37 0 23 0 0 0 chr10 9542187 9542210 -136047078 + AT_rich Low_complexity Low_complexity 1 23 0 2189 108 7 0 chr10 9543028 9543335 -136045953 + AluSq SINE Alu 1 309 -4 264 326 26 34 chr10 9544022 9544180 -136045108 - MIR SINE MIR -81 127 17 742 186 36 7 chr10 9544415 9544555 -136044733 - FRAM SINE Alu -26 150 7 22 56 0 0 chr10 9544675 9544711 -136044577 + AT_rich Low_complexity Low_complexity 1 36 0 286 211 32 84 chr10 9546107 9546202 -136043086 - MIR3 SINE MIR -21 187 98 211 322 20 74 chr10 9546872 9547021 -136042267 + L2 LINE L2 1803 1943 -1371 369 324 17 56 chr10 9547153 9547332 -136041956 + LTR16A LTR ERVL 198 369 -81 1001 223 96 98 chr10 9547437 9547864 -136041424 + MSTA LTR MaLR 1 426 -2 430 53 80 53 chr10 9548269 9548344 -136040944 + MADE1 DNA Mariner 4 80 0 197 108 27 0 chr10 9548688 9548725 -136040563 + (CTTTG)n Simple_repeat Simple_repeat 2 39 0 5466 102 16 5 chr10 9549512 9550317 -136038971 + L1PA13 LINE L1 5348 6161 -2 190 323 183 11 chr10 9550844 9550937 -136038351 + MIR3 SINE MIR 46 154 -54 261 229 104 31 chr10 9553071 9553167 -136036121 - L2 LINE L2 -10 3303 3201 420 287 72 24 chr10 9553268 9553435 -136035853 + MER5B DNA MER1_type 1 175 -3 261 179 0 119 chr10 9553445 9553512 -136035776 + L2 LINE L2 3213 3271 -1 2218 124 0 0 chr10 9554291 9554589 -136034699 + AluSx SINE Alu 1 298 -14 522 311 34 10 chr10 9555348 9555557 -136033731 + L1MC4 LINE L1 6459 6672 -1370 566 306 52 9 chr10 9557743 9557972 -136031316 - HERV16 LTR ERVL -2550 3104 2866 334 345 6 24 chr10 9558303 9558471 -136030817 - HERV16 LTR ERVL -3194 2460 2296 2299 113 54 6 chr10 9558482 9558835 -136030453 - THE1C LTR MaLR -3 372 3 355 386 33 39 chr10 9559274 9559694 -136029594 - HERV16 LTR ERVL -3425 1571 1323 252 308 130 35 chr10 9560576 9560745 -136028543 + L2 LINE L2 3109 3293 -20 24 0 0 0 chr10 9561097 9561121 -136028167 + AT_rich Low_complexity Low_complexity 1 24 0 1369 239 15 39 chr10 9561475 9561602 -136027686 + L1MB7 LINE L1 5789 5917 -267 2173 100 17 7 chr10 9561602 9561902 -136027386 - AluSx SINE Alu -9 303 1 1369 239 15 39 chr10 9561902 9562163 -136027125 + L1MB7 LINE L1 5917 6168 -16 312 322 20 0 chr10 9562244 9562443 -136026845 + L1M4 LINE L1 2349 2551 -3595 258 182 26 13 chr10 9562548 9562625 -136026663 + (CATATA)n Simple_repeat Simple_repeat 2 79 0 322 259 130 19 chr10 9562625 9562787 -136026501 + L1MCa LINE L1 2017 2196 -4230 517 248 30 0 chr10 9562819 9562952 -136026336 + L1MC3 LINE L1 6599 6735 -1050 316 211 32 16 chr10 9562956 9563079 -136026209 + L1MB7 LINE L1 6058 6182 -2 186 103 0 0 chr10 9564343 9564372 -136024916 + (TCCC)n Simple_repeat Simple_repeat 3 31 0 1038 104 6 22 chr10 9564384 9564567 -136024721 + (TTTC)n Simple_repeat Simple_repeat 1 180 0 22 0 0 0 chr10 9565050 9565072 -136024216 + AT_rich Low_complexity Low_complexity 1 22 0 215 246 0 18 chr10 9567009 9567066 -136022222 + (CATA)n Simple_repeat Simple_repeat 3 58 0 248 245 161 59 chr10 9567067 9567353 -136021935 - L1MC4 LINE L1 -131 7911 7597 454 301 21 36 chr10 9567389 9567582 -136021706 - L1MC4a LINE L1 -393 7415 7226 2294 89 3 3 chr10 9568165 9568469 -136020819 + AluSp SINE Alu 1 304 -9 330 317 147 75 chr10 9569911 9570383 -136018905 - L1MEd LINE L1 -730 1760 1139 190 56 56 0 chr10 9570383 9570419 -136018869 + (TA)n Simple_repeat Simple_repeat 1 38 0 330 317 147 75 chr10 9570419 9570592 -136018696 - L1MEd LINE L1 -1351 1139 980 345 200 38 25 chr10 9571472 9571552 -136017736 + MLT1J LTR MaLR 100 180 -331 2134 120 0 3 chr10 9571595 9571903 -136017385 + AluSc SINE Alu 1 307 -2 1099 211 19 42 chr10 9572369 9572629 -136016659 + L1M4 LINE L1 4536 4789 -1357 2050 127 37 0 chr10 9572948 9573247 -136016041 + AluSq SINE Alu 2 311 -2 2114 171 88 0 chr10 9573724 9574110 -136015178 + MSTB LTR MaLR 3 422 -4 824 110 0 0 chr10 9574730 9574839 -136014449 + AluSq SINE Alu 105 213 -100 870 230 61 9 chr10 9575502 9575732 -136013556 - L1MB8 LINE L1 -6 6172 5931 1585 58 98 146 chr10 9575738 9576067 -136013221 - AluY SINE Alu 0 315 1 190 235 44 44 chr10 9576409 9576477 -136012811 - MIR SINE MIR 0 262 195 22 35 0 0 chr10 9576487 9576516 -136012772 + AT_rich Low_complexity Low_complexity 1 29 0 2009 105 15 52 chr10 9576972 9577296 -136011992 - AluSx SINE Alu 0 312 1 201 362 148 0 chr10 9577740 9577889 -136011399 - L2 LINE L2 -448 2866 2696 983 217 29 16 chr10 9577894 9578138 -136011150 + MLT1A1 LTR MaLR 2 248 -117 192 250 17 50 chr10 9578316 9578376 -136010912 + MIR SINE MIR 205 262 0 491 216 9 38 chr10 9578422 9578553 -136010735 + MLT1A1 LTR MaLR 250 365 0 433 370 56 40 chr10 9578574 9579055 -136010233 - L2 LINE L2 -639 2675 2187 449 324 48 67 chr10 9579063 9579378 -136009910 + L2 LINE L2 2961 3269 -3 2062 120 6 43 chr10 9579388 9579737 -136009551 + L1MA9 LINE L1 5447 5782 -509 3750 112 0 15 chr10 9579760 9580295 -136008993 - MER1A DNA MER1_type 0 527 1 2531 169 31 10 chr10 9580351 9580872 -136008416 + L1MA9 LINE L1 5781 6312 0 407 313 95 29 chr10 9582004 9582438 -136006850 - LTR33 LTR ERVL -2 519 24 507 189 29 11 chr10 9582577 9582668 -136006620 + (TAGA)n Simple_repeat Simple_repeat 3 91 -89 1944 201 6 6 chr10 9582668 9583032 -136006256 + MLT1A1 LTR MaLR 2 365 0 507 189 29 11 chr10 9583032 9583115 -136006173 + (TAGA)n Simple_repeat Simple_repeat 91 180 0 268 193 0 133 chr10 9583142 9583225 -136006063 - MLT2C1 LTR ERVL -50 347 276 546 185 67 8 chr10 9583549 9583668 -136005620 - MSTB1 LTR MaLR -2 430 305 283 103 69 0 chr10 9583647 9583705 -136005583 + AluYb8 SINE Alu 243 304 -4 * 324 314 102 28 chr10 9584165 9584448 -136004840 + L1M4 LINE L1 4247 4550 -1596 1264 107 58 0 chr10 9584471 9584677 -136004611 + L1MA1 LINE L1 6085 6302 0 238 139 38 25 chr10 9585823 9585902 -136003386 + GA-rich Low_complexity Low_complexity 2 81 0 2182 117 3 3 chr10 9587342 9587640 -136001648 - AluSq SINE Alu -15 298 1 683 301 58 62 chr10 9587780 9588279 -136001009 - LTR67 LTR ERVL -22 535 39 440 273 41 78 chr10 9588337 9588579 -136000709 - L2 LINE L2 -4 3309 3077 2022 124 41 0 chr10 9588800 9589090 -136000198 - AluSx SINE Alu -10 302 1 3943 223 89 96 chr10 9589095 9591215 -135998073 - L1MCa LINE L1 -2805 3621 1487 2259 113 33 33 chr10 9591215 9591579 -135997709 + THE1B LTR MaLR 1 364 0 3943 223 89 96 chr10 9591579 9592836 -135996452 - L1MCa LINE L1 -4939 1487 263 2143 129 134 3 chr10 9592836 9593209 -135996079 - MSTA LTR MaLR -2 426 5 3943 223 89 96 chr10 9593209 9593337 -135995951 - L1MCa LINE L1 -6163 263 136 2156 131 3 10 chr10 9593350 9593664 -135995624 - AluSx SINE Alu 0 312 1 2057 140 10 0 chr10 9593709 9594017 -135995271 + AluSq SINE Alu 1 311 -2 745 317 101 29 chr10 9594019 9594435 -135994853 - LTR67 LTR ERVL -79 478 33 1539 213 44 49 chr10 9595178 9595567 -135993721 + MLT1B LTR MaLR 1 387 -3 397 298 43 6 chr10 9596518 9596679 -135992609 - MER110A LTR ERV1 0 468 302 2383 80 0 3 chr10 9596699 9597011 -135992277 + AluY SINE Alu 1 311 0 308 149 0 15 chr10 9597024 9597091 -135992197 + (TA)n Simple_repeat Simple_repeat 2 67 0 395 247 92 35 chr10 9597092 9597266 -135992022 + L1MB7 LINE L1 1706 1889 -4495 2329 216 82 55 chr10 9597310 9597702 -135991586 + L1MB7 LINE L1 5085 5465 -955 1739 173 14 3 chr10 9597702 9597985 -135991303 + AluJb SINE Alu 1 286 -26 2329 216 82 55 chr10 9597985 9598752 -135990536 + L1MB7 LINE L1 5465 6420 0 718 287 78 29 chr10 9599471 9599715 -135989573 + MIR SINE MIR 2 257 -5 2042 106 51 7 chr10 9599804 9600096 -135989192 + AluSg SINE Alu 1 305 -5 1984 127 43 0 chr10 9600584 9600883 -135988405 - AluSx SINE Alu 0 312 1 475 119 10 69 chr10 9601576 9601677 -135987611 - L1MA6 LINE L1 -303 5997 5903 1613 156 13 42 chr10 9602183 9602490 -135986798 + Tigger2a DNA MER2_type 2 299 -135 534 109 10 69 chr10 9602521 9602622 -135986666 - L1MA6 LINE L1 -303 5997 5903 2358 104 0 0 chr10 9603016 9603324 -135985964 + AluSg SINE Alu 1 308 -2 183 333 0 0 chr10 9603346 9603388 -135985900 + MIR SINE MIR 23 64 -198 243 174 10 82 chr10 9603398 9603496 -135985792 - L1MC4 LINE L1 -1338 6704 6614 238 213 16 31 chr10 9603501 9603763 -135985525 + (TA)n Simple_repeat Simple_repeat 1 257 0 180 77 0 0 chr10 9604369 9604395 -135984893 + (TC)n Simple_repeat Simple_repeat 1 26 0 2030 134 17 0 chr10 9604395 9604686 -135984602 - AluSx SINE Alu -8 304 9 1736 156 64 37 chr10 9606128 9606456 -135982832 + MER1B DNA MER1_type 1 337 0 235 209 314 0 chr10 9607214 9607300 -135981988 + MIR SINE MIR 128 240 -22 300 266 75 75 chr10 9607409 9607608 -135981680 + MLT1K LTR MaLR 349 547 -41 1811 133 14 0 chr10 9607722 9608023 -135981265 - AluSx SINE Alu 0 305 1 189 349 0 32 chr10 9608121 9608184 -135981104 - L2 LINE L2 -76 3196 3136 319 242 31 47 chr10 9608756 9608792 -135980496 + CT-rich Low_complexity Low_complexity 3 38 -90 2735 88 3 0 chr10 9608792 9609155 -135980133 + THE1B LTR MaLR 1 364 0 319 242 31 47 chr10 9609155 9609246 -135980042 + CT-rich Low_complexity Low_complexity 38 128 0 905 118 0 7 chr10 9609259 9609411 -135979877 + (TTC)n Simple_repeat Simple_repeat 2 152 0 2121 133 7 0 chr10 9609450 9609752 -135979536 + AluSx SINE Alu 1 304 -8 256 345 53 35 chr10 9610082 9610195 -135979093 - L2 LINE L2 -21 3251 3137 1284 212 75 47 chr10 9610341 9610700 -135978588 - MLT1A2 LTR MaLR -5 369 1 869 218 17 6 chr10 9610882 9611056 -135978232 - MER5A DNA MER1_type -5 184 9 940 247 60 33 chr10 9611078 9611378 -135977910 + L1ME3A LINE L1 5805 6112 -58 187 404 27 76 chr10 9611449 9611672 -135977616 - L2 LINE L2 -11 3261 3050 2667 227 64 112 chr10 9612406 9613512 -135975776 - L1MC/D LINE L1 -743 5797 5002 189 0 0 0 chr10 9613512 9613533 -135975755 + (TG)n Simple_repeat Simple_repeat 2 22 0 2667 227 64 112 chr10 9613533 9614415 -135974873 - L1MC/D LINE L1 -1538 5002 4079 221 56 0 28 chr10 9614415 9614451 -135974837 + (TTTTA)n Simple_repeat Simple_repeat 1 35 0 7120 24 0 0 chr10 9614451 9615273 -135974015 - L1PA3 LINE L1 -24 6131 5310 * 9877 24 2 0 chr10 9615271 9616447 -135972841 + L1PA3 LINE L1 4125 5302 -844 509 254 55 22 chr10 9616447 9616628 -135972660 - L1MC/D LINE L1 -2449 4091 3905 541 228 17 70 chr10 9616632 9616873 -135972415 - L1MC/D LINE L1 -4809 1731 1504 1274 217 23 23 chr10 9616988 9617287 -135972001 - L1MB8 LINE L1 -9 6169 5871 262 333 0 0 chr10 9617591 9617660 -135971628 - LTR16A LTR ERVL -122 328 260 * 516 208 0 0 chr10 9617659 9617765 -135971523 + Cheshire DNA MER1_type 717 822 -1598 303 273 0 0 chr10 9617797 9617863 -135971425 - Tigger5 DNA MER2_type 0 2323 2258 * 304 146 21 0 chr10 9617859 9617907 -135971381 + Tigger5 DNA MER2_type 2272 2320 -3 * 378 222 0 25 chr10 9617907 9617987 -135971301 - Tigger5 DNA MER2_type -2245 78 1 1047 94 0 0 chr10 9617997 9618156 -135971132 + L1MA8 LINE L1 6130 6288 -3 6576 194 36 12 chr10 9618156 9619607 -135969681 + Cheshire DNA MER1_type 847 2333 -87 270 395 8 0 chr10 9620302 9620421 -135968867 - ERVL LTR ERVL -2263 3501 3382 864 371 89 12 chr10 9620441 9621193 -135968095 - ERVL LTR ERVL -2972 2792 1983 463 139 13 0 chr10 9621414 9621493 -135967795 + MADE1 DNA Mariner 1 80 0 414 0 0 0 chr10 9621682 9621728 -135967560 + (TG)n Simple_repeat Simple_repeat 2 47 0 291 332 88 36 chr10 9621750 9622024 -135967264 - ERVL LTR ERVL -4084 1680 1393 2313 142 81 51 chr10 9622771 9623265 -135966023 - LTR22 LTR ERVK 0 509 1 423 302 85 32 chr10 9623882 9623952 -135965336 - LTR33 LTR ERVL -242 279 214 2048 185 80 74 chr10 9623952 9624503 -135964785 + MLT2B3 LTR ERVL 1 554 0 423 302 85 32 chr10 9624503 9624680 -135964608 - LTR33 LTR ERVL -307 214 19 304 336 79 57 chr10 9624996 9625666 -135963622 + L1MEd LINE L1 100 784 -5335 180 0 0 0 chr10 9627968 9627988 -135961300 + (CAAA)n Simple_repeat Simple_repeat 1 20 0 2057 155 3 23 chr10 9628367 9628716 -135960572 - MER7A DNA MER2_type -1 345 6 274 237 40 0 chr10 9629371 9629447 -135959841 + (CATA)n Simple_repeat Simple_repeat 4 82 0 443 166 30 12 chr10 9629448 9629617 -135959671 + (TA)n Simple_repeat Simple_repeat 2 173 0 298 88 77 11 chr10 9631385 9631476 -135957812 + (TA)n Simple_repeat Simple_repeat 2 98 0 269 156 78 7 chr10 9631673 9631827 -135957461 + (TA)n Simple_repeat Simple_repeat 2 166 0 419 130 82 14 chr10 9631862 9632147 -135957141 + (TA)n Simple_repeat Simple_repeat 1 304 0 1076 59 0 0 chr10 9632147 9632282 -135957006 + MER85 DNA T2_type 4 138 -1 279 94 94 0 chr10 9632376 9632472 -135956816 + (TA)n Simple_repeat Simple_repeat 1 105 0 201 343 96 22 chr10 9634862 9635040 -135954248 - L2 LINE L2 -1291 2023 1833 1983 143 7 3 chr10 9635116 9635410 -135953878 + AluSx SINE Alu 1 295 -17 4064 153 20 6 chr10 9635504 9636198 -135953090 - MER50 LTR ERV1 -30 704 1 35 63 0 0 chr10 9636410 9636473 -135952815 + AT_rich Low_complexity Low_complexity 1 63 0 1111 219 29 21 chr10 9636950 9637229 -135952059 + MER89 LTR ERV1 279 559 0 2054 116 7 3 chr10 9637270 9637577 -135951711 + AluSq SINE Alu 1 308 0 1427 201 22 43 chr10 9637829 9638198 -135951090 - MLT1A1 LTR MaLR 0 365 5 515 241 35 14 chr10 9639483 9639628 -135949660 - MIR SINE MIR -6 256 109 233 213 32 32 chr10 9640361 9640455 -135948833 + A-rich Low_complexity Low_complexity 4 97 0 315 309 46 40 chr10 9640952 9641104 -135948184 + HAL1b LINE L1 684 836 -512 1482 279 79 37 chr10 9641182 9642060 -135947228 - L1MEc LINE L1 -3563 2652 1754 1982 148 3 3 chr10 9642060 9642371 -135946917 - AluSx SINE Alu -1 311 1 1482 279 79 37 chr10 9642371 9642661 -135946627 - L1MEc LINE L1 -4461 1754 1477 259 331 47 54 chr10 9642846 9642994 -135946294 - L2 LINE L2 -1 3271 3125 184 109 22 22 chr10 9643271 9643317 -135945971 + A-rich Low_complexity Low_complexity 2 47 0 234 0 0 0 chr10 9644140 9644166 -135945122 + (GA)n Simple_repeat Simple_repeat 1 26 0 1826 122 0 4 chr10 9644346 9644593 -135944695 - AluSg SINE Alu -35 275 30 918 86 0 0 chr10 9644696 9644824 -135944464 - L1PA6 LINE L1 0 6154 6027 413 227 0 24 chr10 9644906 9645049 -135944239 + Tigger5 DNA MER2_type 1 193 -2130 439 189 0 0 chr10 9645052 9645126 -135944162 + Tigger5 DNA MER2_type 2250 2323 0 312 118 0 108 chr10 9645535 9645594 -135943694 + AluSx SINE Alu 1 44 -258 510 46 0 0 chr10 9645594 9645659 -135943629 + (TC)n Simple_repeat Simple_repeat 1 65 0 7448 62 42 2 chr10 9645683 9646353 -135942935 + LTR13 LTR ERVK 1 723 -284 213 39 0 0 chr10 9646353 9646379 -135942909 + (TC)n Simple_repeat Simple_repeat 2 27 0 7448 62 42 2 chr10 9646379 9646676 -135942612 + LTR13 LTR ERVK 723 1007 0 1592 157 4 0 chr10 9646938 9647187 -135942101 + AluSx SINE Alu 61 310 -2 1338 254 11 14 chr10 9647195 9647557 -135941731 + MLT1A1 LTR MaLR 5 365 0 26 0 0 0 chr10 9648854 9648880 -135940408 + AT_rich Low_complexity Low_complexity 1 26 0 966 92 7 7 chr10 9649370 9649511 -135939777 + L1PA11 LINE L1 6031 6171 -3 1333 221 17 20 chr10 9649700 9649994 -135939294 + AluJb SINE Alu 1 293 -19 235 209 314 0 chr10 9651732 9651818 -135937470 + MIR SINE MIR 128 240 -22 300 266 75 75 chr10 9651927 9652126 -135937162 + MLT1K LTR MaLR 349 547 -41 1798 137 14 0 chr10 9652240 9652544 -135936744 - AluSx SINE Alu 0 308 1 294 316 129 71 chr10 9652642 9652848 -135936440 - L2 LINE L2 -76 3237 3044 2202 126 0 0 chr10 9652848 9653158 -135936130 + AluSx SINE Alu 1 310 -2 294 316 129 71 chr10 9653158 9653347 -135935941 - L2 LINE L2 -269 3044 2819 2163 97 28 3 chr10 9653572 9653862 -135935426 + AluSx SINE Alu 1 297 -15 1917 102 0 4 chr10 9654498 9654752 -135934536 - AluSc SINE Alu -17 292 40 241 238 48 12 chr10 9654898 9654982 -135934306 + L1MC4 LINE L1 6609 6695 -1347 310 319 60 19 chr10 9655147 9655381 -135933907 - HERV16 LTR ERVL -2359 2637 2390 821 156 78 28 chr10 9655593 9655773 -135933515 + MLT1B LTR MaLR 1 189 -201 11675 81 1 19 chr10 9655832 9657395 -135931893 + HERVL-A1 LTR ERVL 4119 5654 0 2917 71 20 8 chr10 9657395 9657789 -135931499 + MLT2A1 LTR ERVL 1 399 -45 333 276 155 30 chr10 9657887 9658152 -135931136 + L1MC5 LINE L1 7627 7924 -37 41 58 0 0 chr10 9658887 9658956 -135930332 + AT_rich Low_complexity Low_complexity 1 69 0 13872 154 16 11 chr10 9658956 9661362 -135927926 + Tigger1 DNA MER2_type 1 2418 0 2310 85 0 3 chr10 9661490 9661783 -135927505 - AluSg SINE Alu -18 292 1 1249 286 167 20 chr10 9661801 9662592 -135926696 + L2 LINE L2 2258 3165 -148 325 301 71 27 chr10 9664951 9665134 -135924154 + MIR SINE MIR 72 262 0 24 0 0 0 chr10 9665884 9665908 -135923380 + AT_rich Low_complexity Low_complexity 1 24 0 608 327 19 56 chr10 9666030 9666406 -135922882 + L1MEc LINE L1 109 470 -5926 350 198 135 10 chr10 9666431 9666527 -135922761 - L1MEc LINE L1 -4623 1773 1666 * 912 225 67 101 chr10 9666524 9666677 -135922611 - L1M4 LINE L1 -912 5234 5077 1987 129 7 3 chr10 9666677 9666964 -135922324 - AluSx SINE Alu -24 288 1 912 225 67 101 chr10 9666964 9667317 -135921971 - L1M4 LINE L1 -1069 5077 4745 443 279 118 42 chr10 9667342 9667579 -135921709 - L1M4 LINE L1 -2800 3346 3092 1065 304 56 20 chr10 9667659 9668271 -135921017 + L1MEc LINE L1 498 1131 -5265 1456 241 98 18 chr10 9668271 9668840 -135920448 - L1M4 LINE L1 -3168 2978 2364 438 302 131 20 chr10 9669030 9669374 -135919914 + L1MEc LINE L1 1220 1601 -4614 41 48 0 0 chr10 9669423 9669485 -135919803 + AT_rich Low_complexity Low_complexity 1 62 0 189 74 0 0 chr10 9669495 9669522 -135919766 + (TAGA)n Simple_repeat Simple_repeat 4 30 0 3935 78 0 4 chr10 9669530 9670043 -135919245 - MER9 LTR ERVK 0 511 1 424 387 30 0 chr10 9670429 9670597 -135918691 + MER115 DNA AcHobo 170 342 -351 563 269 75 0 chr10 9670696 9670856 -135918432 + MER115 DNA AcHobo 522 693 0 26 0 0 0 chr10 9671123 9671149 -135918139 + AT_rich Low_complexity Low_complexity 1 26 0 1654 213 77 0 chr10 9671813 9672189 -135917099 - MER74A LTR ERVL -26 532 128 2125 150 25 11 chr10 9672264 9672623 -135916665 + THE1B LTR MaLR 1 364 0 206 125 0 25 chr10 9674019 9674059 -135915229 + (GGAA)n Simple_repeat Simple_repeat 3 41 0 587 179 0 0 chr10 9675348 9675471 -135913817 - L1MA4 LINE L1 -239 6061 5939 1129 154 21 17 chr10 9675476 9675709 -135913579 + L1MA4 LINE L1 6067 6300 0 2300 125 23 0 chr10 9675867 9676211 -135913077 - THE1B LTR MaLR 0 364 13 204 40 0 0 chr10 9676502 9676527 -135912761 + (TG)n Simple_repeat Simple_repeat 2 26 0 413 349 28 25 chr10 9678910 9679234 -135910054 - L1ME LINE L1 -372 5749 5425 491 266 36 85 chr10 9679823 9680184 -135909104 - MLT2C1 LTR ERVL -43 620 18 1135 164 65 104 chr10 9683476 9683861 -135905427 - LTR25 LTR ERV1 -10 784 415 273 197 136 0 chr10 9683829 9683895 -135905393 - MER51A LTR ERV1 -351 283 209 * 310 235 42 18 chr10 9684062 9684174 -135905114 - MER61E LTR ERV1 -484 85 1 872 239 110 0 chr10 9684254 9684589 -135904699 + Charlie1 DNA MER1_type 2390 2761 0 360 43 0 0 chr10 9684724 9684770 -135904518 + (TG)n Simple_repeat Simple_repeat 2 47 0 245 271 0 0 chr10 9684828 9684887 -135904401 - L2 LINE L2 0 3313 3255 699 230 58 26 chr10 9685332 9685523 -135903765 + MIR SINE MIR 2 198 -64 24 0 0 0 chr10 9685583 9685607 -135903681 + AT_rich Low_complexity Low_complexity 1 24 0 401 282 92 14 chr10 9685773 9685915 -135903373 + L3 LINE CR1 677 829 -748 183 336 198 0 chr10 9685957 9686073 -135903215 + L3 LINE CR1 919 1057 -520 21 71 0 0 chr10 9687237 9687279 -135902009 + AT_rich Low_complexity Low_complexity 1 42 0 216 67 0 0 chr10 9687570 9687600 -135901688 + (A)n Simple_repeat Simple_repeat 1 30 0 2261 99 0 0 chr10 9687605 9687908 -135901380 + AluSc SINE Alu 1 303 -6 1094 201 68 95 chr10 9688476 9688909 -135900379 + MLT2C2 LTR ERVL 5 425 -39 240 59 0 0 chr10 9688909 9688943 -135900345 + (CA)n Simple_repeat Simple_repeat 1 34 0 1094 201 68 95 chr10 9688943 9688982 -135900306 + MLT2C2 LTR ERVL 425 464 0 1481 125 37 0 chr10 9689548 9689803 -135899485 + AluSx SINE Alu 60 322 0 375 315 108 47 chr10 9691619 9691832 -135897456 + MLT1J LTR MaLR 1 226 -285 3177 272 41 14 chr10 9692010 9693524 -135895764 - L1MEc LINE L1 -2779 3647 2125 616 242 55 16 chr10 9693570 9693752 -135895536 - MER58A DNA MER1_type 0 224 36 247 275 71 71 chr10 9693824 9694035 -135895253 - L1MEc LINE L1 -4738 1688 1478 233 273 30 0 chr10 9694037 9694103 -135895185 + CT-rich Low_complexity Low_complexity 4 71 0 252 300 66 39 chr10 9694103 9694360 -135894928 - L1MEc LINE L1 -4920 2202 1939 758 229 45 14 chr10 9694590 9694813 -135894475 - L1MEc LINE L1 -6168 255 26 247 282 15 38 chr10 9694933 9695064 -135894224 - HAL1 LINE L1 -1352 1155 1028 411 328 53 65 chr10 9695309 9695800 -135893488 - HAL1 LINE L1 -1988 519 35 837 260 32 65 chr10 9696306 9696565 -135892723 - L1ME1 LINE L1 -134 6032 5786 1948 155 57 28 chr10 9696565 9696919 -135892369 + THE1B LTR MaLR 1 364 0 837 260 32 65 chr10 9696919 9697062 -135892226 - L1ME1 LINE L1 -380 5786 5640 189 0 0 0 chr10 9697086 9697107 -135892181 + (T)n Simple_repeat Simple_repeat 1 21 0 658 301 0 19 chr10 9697174 9697387 -135891901 - MER58A DNA MER1_type -8 216 8 328 333 39 8 chr10 9697390 9697519 -135891769 - Zaphod DNA AcHobo -3445 586 454 288 217 0 0 chr10 9697567 9697636 -135891652 + G-rich Low_complexity Low_complexity 1 69 0 1617 309 13 20 chr10 9697764 9698318 -135890970 - Zaphod DNA AcHobo -3480 551 2 280 355 45 27 chr10 9698323 9698543 -135890745 + L2 LINE L2 2684 2907 -407 22 0 0 0 chr10 9699784 9699806 -135889482 + AT_rich Low_complexity Low_complexity 1 22 0 21 0 0 0 chr10 9700325 9700346 -135888942 + AT_rich Low_complexity Low_complexity 1 21 0 4272 174 66 57 chr10 9700371 9701433 -135887855 + MER11C LTR ERVK 1 1071 0 200 411 9 9 chr10 9701439 9701546 -135887742 + L2 LINE L2 3136 3242 -30 269 294 39 106 chr10 9701570 9701688 -135887600 - MIR SINE MIR -28 234 131 1995 132 20 0 chr10 9701688 9701984 -135887304 + AluSx SINE Alu 1 302 -10 269 294 39 106 chr10 9701984 9702045 -135887243 - MIR SINE MIR -131 131 67 27 0 0 0 chr10 9702302 9702329 -135886959 + AT_rich Low_complexity Low_complexity 1 27 0 188 67 33 0 chr10 9703463 9703493 -135885795 + (TTTG)n Simple_repeat Simple_repeat 2 32 0 811 286 83 35 chr10 9703963 9704441 -135884847 - L1ME1 LINE L1 0 6166 5629 25 31 0 0 chr10 9704729 9704761 -135884527 + AT_rich Low_complexity Low_complexity 1 32 0 291 282 28 0 chr10 9705132 9705203 -135884085 - MIR3 SINE MIR -6 202 130 22 35 0 0 chr10 9705598 9705627 -135883661 + AT_rich Low_complexity Low_complexity 1 29 0 21 0 0 0 chr10 9705931 9705952 -135883336 + AT_rich Low_complexity Low_complexity 1 21 0 344 289 21 72 chr10 9706770 9706964 -135882324 - L1ME3A LINE L1 -18 6152 5969 2019 136 0 17 chr10 9706969 9707271 -135882017 + AluSx SINE Alu 7 303 -9 927 305 103 25 chr10 9707358 9708351 -135880937 - L1ME3A LINE L1 -202 5960 4896 360 207 0 0 chr10 9708655 9708713 -135880575 - AluJ/FRAM SINE Alu -13 289 232 843 144 8 0 chr10 9708721 9708846 -135880442 - AluJb SINE Alu -186 126 1 567 308 87 61 chr10 9708848 9709800 -135879488 - L1ME3A LINE L1 -1587 4559 3566 1398 283 32 20 chr10 9709800 9710299 -135878989 + MLT1D LTR MaLR 1 505 0 567 308 87 61 chr10 9710299 9710592 -135878696 - L1ME3A LINE L1 -2580 3566 3282 290 325 9 0 chr10 9710944 9711058 -135878230 + L1M4 LINE L1 4052 4166 -1980 25 83 0 0 chr10 9711184 9711244 -135878044 + AT_rich Low_complexity Low_complexity 1 60 0 542 324 110 39 chr10 9711258 9711280 -135878008 + L1M4 LINE L1 4390 4409 -1737 1749 189 9 3 chr10 9711280 9711619 -135877669 + L1MC1 LINE L1 5980 6320 -13 542 324 110 39 chr10 9711619 9712189 -135877099 + L1M4 LINE L1 4409 5024 -1122 2455 71 0 7 chr10 9712224 9712533 -135876755 + AluY SINE Alu 1 307 -4 417 169 331 0 chr10 9712549 9712685 -135876603 + L1MB7 LINE L1 2334 2514 -3632 4600 209 33 38 chr10 9712703 9714884 -135874404 + L1MB7 LINE L1 4005 6165 -19 363 338 29 7 chr10 9715280 9715419 -135873869 - MIR SINE MIR -114 148 7 25 0 0 0 chr10 9716265 9716290 -135872998 + AT_rich Low_complexity Low_complexity 1 25 0 208 200 22 0 chr10 9717359 9717404 -135871884 + (TAA)n Simple_repeat Simple_repeat 1 46 0 369 350 54 8 chr10 9719564 9719804 -135869484 + MLT1L LTR MaLR 357 607 -8 2576 164 9 2 chr10 9719861 9720301 -135868987 + L1MC1 LINE L1 5356 5798 -535 312 87 0 0 chr10 9720486 9720532 -135868756 + L1MC1 LINE L1 5816 5861 -483 2203 173 30 49 chr10 9720588 9721061 -135868227 + L1MC1 LINE L1 5870 6333 0 1375 175 110 7 chr10 9721071 9721379 -135867909 - MER2 DNA MER2_type -4 340 1 1131 190 26 8 chr10 9721379 9721638 -135867650 + L1MB2 LINE L1 5903 6169 -2 254 215 15 0 chr10 9721639 9721704 -135867584 + (TA)n Simple_repeat Simple_repeat 1 66 0 761 179 8 0 chr10 9721798 9721932 -135867356 - AluSq/x SINE Alu -167 146 12 275 201 160 104 chr10 9721933 9722077 -135867211 + LTR16C LTR ERVL 332 483 -8 1617 191 133 39 chr10 9722996 9723166 -135866122 - MLT1D LTR MaLR -2 503 350 2697 10 0 0 chr10 9723166 9723465 -135865823 - AluYa5 SINE Alu -12 299 1 1617 191 133 39 chr10 9723465 9723754 -135865534 - MLT1D LTR MaLR -155 350 1 292 274 24 0 chr10 9723803 9723887 -135865401 - LTR33 LTR ERVL -10 511 426 2259 115 0 0 chr10 9725622 9725926 -135863362 + AluSx SINE Alu 2 305 -7 655 304 70 8 chr10 9726321 9726564 -135862724 - MLT1J LTR MaLR -210 301 44 8039 181 51 18 chr10 9727079 9727623 -135861665 + Tigger1 DNA MER2_type 1 526 -1892 1579 125 13 0 chr10 9727623 9727855 -135861433 + AluSg/x SINE Alu 67 301 -11 8039 181 51 18 chr10 9727855 9728992 -135860296 + Tigger1 DNA MER2_type 526 1737 -681 1876 72 4 0 chr10 9728992 9729229 -135860059 + L1P4 LINE L1 5443 5680 -488 8540 38 0 0 chr10 9729384 9731173 -135858115 - L1PA4 LINE L1 -1 6154 4351 3896 32 0 0 chr10 9731173 9731637 -135857651 + L1PA4 LINE L1 3884 4347 -1799 28 29 0 0 chr10 9731792 9731827 -135857461 + AT_rich Low_complexity Low_complexity 1 35 0 243 195 52 0 chr10 9731901 9731978 -135857310 + L1MD3 LINE L1 1478 1558 -5301 * 839 311 73 38 chr10 9731965 9732804 -135856484 + L1MD3 LINE L1 2171 3038 -4100 * 1644 74 0 0 chr10 9732803 9733018 -135856270 + L1P LINE L1 4745 4959 -1187 504 249 101 0 chr10 9733034 9733223 -135856065 + L1MD3 LINE L1 5473 5680 -1277 692 65 65 9 chr10 9733440 9733547 -135855741 + L1PA14 LINE L1 6044 6156 -5 261 212 15 0 chr10 9733560 9733626 -135855662 - Tigger1 DNA MER2_type -2351 67 1 1971 257 50 14 chr10 9733642 9734289 -135854999 + L1MD3 LINE L1 6107 6776 -2030 207 114 0 0 chr10 9734321 9734356 -135854932 + (TCTA)n Simple_repeat Simple_repeat 4 38 0 476 262 151 7 chr10 9734373 9734652 -135854636 + L1MEc LINE L1 1914 2232 -4164 591 274 124 17 chr10 9734671 9734912 -135854376 + L1M4b LINE L1 18 284 -6575 315 277 11 119 chr10 9735036 9735296 -135853992 + L1M4b LINE L1 994 1225 -5634 1499 259 74 45 chr10 9735548 9736118 -135853170 + L1M4b LINE L1 2512 3064 -3893 1967 139 0 32 chr10 9736118 9736427 -135852861 + AluSx SINE Alu 1 299 -13 1499 259 74 45 chr10 9736427 9737076 -135852212 + L1M4b LINE L1 3064 3743 -3214 2090 116 0 0 chr10 9737077 9737354 -135851934 + AluSx SINE Alu 1 277 -35 820 331 51 31 chr10 9737480 9737933 -135851355 - LTR16B LTR ERVL 0 464 3 478 287 51 15 chr10 9737960 9738155 -135851133 - L1MEc LINE L1 -3568 2647 2446 2502 296 70 55 chr10 9738193 9739138 -135850150 - L1MEc LINE L1 -3976 2420 1491 192 77 0 0 chr10 9739138 9739164 -135850124 + (TG)n Simple_repeat Simple_repeat 2 27 0 2502 296 70 55 chr10 9739164 9740589 -135848699 - L1MEc LINE L1 -4905 1491 14 269 241 12 24 chr10 9740567 9740650 -135848638 + L1MC/D LINE L1 5705 5786 -2022 * 212 208 19 0 chr10 9740812 9740865 -135848423 + (TA)n Simple_repeat Simple_repeat 1 54 0 24 53 0 0 chr10 9742749 9742787 -135846501 + AT_rich Low_complexity Low_complexity 1 38 0 937 195 0 0 chr10 9743765 9743919 -135845369 + AluJb SINE Alu 133 286 -26 191 363 96 19 chr10 9744456 9744613 -135844675 + MIR3 SINE MIR 33 201 -7 279 71 0 0 chr10 9744852 9744894 -135844394 + (TG)n Simple_repeat Simple_repeat 2 43 0 21 82 0 0 chr10 9745156 9745205 -135844083 + AT_rich Low_complexity Low_complexity 1 49 0 1510 188 91 0 chr10 9745905 9746224 -135843064 + MER7A DNA MER2_type 1 346 0 680 303 90 34 chr10 9746352 9746619 -135842669 + LTR16C LTR ERVL 67 348 -143 29 0 0 0 chr10 9746619 9746648 -135842640 + AT_rich Low_complexity Low_complexity 1 29 0 1455 174 37 58 chr10 9746657 9746951 -135842337 - AluJo SINE Alu -24 288 1 2125 117 3 0 chr10 9746962 9747252 -135842036 - AluSp SINE Alu -11 302 12 250 218 148 92 chr10 9747253 9747395 -135841893 + LTR16C LTR ERVL 332 481 -10 911 233 110 0 chr10 9747839 9748131 -135841157 - MER33 DNA MER1_type 0 324 1 293 250 11 0 chr10 9748566 9748658 -135840630 + (CATATA)n Simple_repeat Simple_repeat 2 94 0