This directory contains a dump of the UCSC genome annotation database for
the Oct. 2004 assembly of the fugu genome (fr2, JGI V4.0).
The annotations were generated by UCSC and collaborators worldwide.

This assembly was produced by the US DOE Joint Genome Institute (JGI).
For more information on the fugu genome, see the project website:
	http://genome.jgi-psf.org/Takru4/Takru4.info.html
	http://www.fugu-sg.org/

Files included in this directory (updated nightly):

  - *.sql files:  the MySQL commands used to create the tables

  - *.txt.gz files: the database tables in a tab-delimited format
    compressed with gzip.

To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
  http://genome.ucsc.edu/cgi-bin/hgTables?db=fr2
and click the "describe table schema" button.  There is also a "view
table schema" link on the configuration page for each track.

---------------------------------------------------------------
If you plan to download a large file or multiple files from this 
directory, we recommend you use ftp rather than downloading the files 
via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to 
the directory goldenPath/fr2/database/. To download multiple 
files, use the "mget" command:

    mget <filename1> <filename2> ...
    - or -
    mget -a (to download all the files in the directory) 

1.  These data have been freely provided by the JGI for use in the
	UCSC Genome Browser.
      Name                          Last modified      Size  Description
Parent Directory - all_est.sql 2019-03-17 09:24 2.1K all_est.txt.gz 2019-03-17 09:24 14M all_mrna.sql 2020-05-08 00:35 2.1K all_mrna.txt.gz 2020-05-08 00:35 77K augustusGene.sql 2015-07-26 13:30 1.9K augustusGene.txt.gz 2015-07-26 13:30 2.5M bigFiles.sql 2021-05-16 03:05 1.4K bigFiles.txt.gz 2021-05-16 03:05 33 blastHg18KG.sql 2009-12-20 11:35 2.3K blastHg18KG.txt.gz 2009-12-20 11:35 2.9M chainDanRer7.sql 2011-02-27 21:42 1.6K chainDanRer7.txt.gz 2011-02-27 21:43 35M chainDanRer7Link.sql 2011-02-27 21:43 1.5K chainDanRer7Link.txt.gz 2011-02-27 21:44 125M chainHg19.sql 2009-10-11 05:54 1.8K chainHg19.txt.gz 2009-10-11 05:54 7.5M chainHg19Link.sql 2009-10-11 05:54 1.5K chainHg19Link.txt.gz 2009-10-11 05:54 41M chainTetNig2.sql 2010-03-14 10:51 1.6K chainTetNig2.txt.gz 2010-03-14 10:51 12M chainTetNig2Link.sql 2010-03-14 10:51 1.5K chainTetNig2Link.txt.gz 2010-03-14 10:52 110M chrM_chainGalGal3.sql 2007-04-11 09:29 1.7K chrM_chainGalGal3.txt.gz 2007-04-11 09:29 395 chrM_chainGalGal3Link.sql 2007-04-11 09:29 1.4K chrM_chainGalGal3Link.txt.gz 2007-04-11 09:29 3.0K chrM_chainGasAcu1.sql 2007-04-11 09:29 1.7K chrM_chainGasAcu1.txt.gz 2007-04-11 09:29 87 chrM_chainGasAcu1Link.sql 2007-04-11 09:29 1.4K chrM_chainGasAcu1Link.txt.gz 2007-04-11 09:29 550 chrM_chainMm9.sql 2007-09-15 14:46 1.6K chrM_chainMm9.txt.gz 2007-09-15 14:46 2.1K chrM_chainMm9Link.sql 2007-09-15 14:46 1.4K chrM_chainMm9Link.txt.gz 2007-09-15 14:46 16K chrM_chainOryLat2.sql 2008-11-16 08:34 1.7K chrM_chainOryLat2.txt.gz 2008-11-16 08:34 803 chrM_chainOryLat2Link.sql 2008-11-16 08:34 1.4K chrM_chainOryLat2Link.txt.gz 2008-11-16 08:34 2.6K chrM_est.sql 2019-03-17 09:24 2.1K chrM_est.txt.gz 2019-03-17 09:24 283K chrM_gap.sql 2007-04-11 09:29 1.5K chrM_gap.txt.gz 2007-04-11 09:29 33 chrM_gold.sql 2007-04-11 09:29 1.6K chrM_gold.txt.gz 2007-04-11 09:29 34 chrM_intronEst.sql 2016-07-03 06:35 2.1K chrM_intronEst.txt.gz 2016-07-03 06:35 39 chrM_mrna.sql 2016-07-03 06:35 2.1K chrM_mrna.txt.gz 2016-07-03 06:35 34 chrM_rmsk.sql 2007-04-11 09:29 1.8K chrM_rmsk.txt.gz 2007-04-11 09:29 97 chrUn_chainGalGal3.sql 2007-04-11 11:45 1.7K chrUn_chainGalGal3.txt.gz 2007-04-11 11:45 1.8M chrUn_chainGalGal3Link.sql 2007-04-11 11:45 1.4K chrUn_chainGalGal3Link.txt.gz 2007-04-11 11:45 15M chrUn_chainGasAcu1.sql 2007-04-11 11:45 1.7K chrUn_chainGasAcu1.txt.gz 2007-04-11 11:45 11M chrUn_chainGasAcu1Link.sql 2007-04-11 11:45 1.4K chrUn_chainGasAcu1Link.txt.gz 2007-04-11 11:47 105M chrUn_chainMm9.sql 2007-09-15 14:46 1.6K chrUn_chainMm9.txt.gz 2007-09-15 14:46 4.7M chrUn_chainMm9Link.sql 2007-09-15 14:46 1.4K chrUn_chainMm9Link.txt.gz 2007-09-15 14:46 30M chrUn_chainOryLat2.sql 2008-11-16 08:33 1.7K chrUn_chainOryLat2.txt.gz 2008-11-16 08:33 32M chrUn_chainOryLat2Link.sql 2008-11-16 08:34 1.4K chrUn_chainOryLat2Link.txt.gz 2008-11-16 08:35 192M chrUn_est.sql 2019-03-17 09:24 2.1K chrUn_est.txt.gz 2019-03-17 09:24 13M chrUn_gap.sql 2007-04-11 11:55 1.5K chrUn_gap.txt.gz 2007-04-11 11:55 85K chrUn_gold.sql 2007-04-11 11:55 1.6K chrUn_gold.txt.gz 2007-04-11 11:55 125K chrUn_intronEst.sql 2019-03-17 09:24 2.1K chrUn_intronEst.txt.gz 2019-03-17 09:24 8.1M chrUn_mrna.sql 2020-05-08 00:49 2.1K chrUn_mrna.txt.gz 2020-05-08 00:49 77K chrUn_rmsk.sql 2007-04-11 11:55 1.8K chrUn_rmsk.txt.gz 2007-04-11 11:55 4.7M chromAlias.sql 2018-08-05 06:34 1.4K chromAlias.txt.gz 2018-08-05 06:34 51 chromInfo.sql 2007-04-11 11:55 1.2K chromInfo.txt.gz 2007-04-11 11:55 78 ensGene.sql 2018-08-05 06:34 1.9K ensGene.txt.gz 2018-08-05 06:34 3.2M ensGtp.sql 2018-08-05 06:34 1.4K ensGtp.txt.gz 2018-08-05 06:34 392K ensPep.sql 2018-08-05 06:34 1.3K ensPep.txt.gz 2018-08-05 06:34 7.3M ensemblSource.sql 2018-08-05 06:34 1.3K ensemblSource.txt.gz 2018-08-05 06:34 119K ensemblToGeneName.sql 2018-08-05 06:34 1.4K ensemblToGeneName.txt.gz 2018-08-05 06:34 190K estOrientInfo.sql 2019-03-17 09:24 1.8K estOrientInfo.txt.gz 2019-03-17 09:24 3.2M extFile.sql 2007-04-11 11:56 1.3K extFile.txt.gz 2007-04-11 11:56 102 gbLoaded.sql 2020-08-21 19:31 1.6K gbLoaded.txt.gz 2020-08-21 19:31 34K gc5Base.sql 2007-04-11 11:57 1.7K gc5Base.txt.gz 2007-04-11 11:57 1.6M grp.sql 2014-03-02 03:40 1.4K grp.txt.gz 2014-03-02 03:40 208 hgFindSpec.sql 2020-10-25 08:00 1.7K hgFindSpec.txt.gz 2020-10-25 08:00 700 history.sql 2010-07-04 15:43 1.5K history.txt.gz 2010-07-04 15:43 781 microsat.sql 2015-08-23 16:31 1.5K microsat.txt.gz 2015-08-23 16:31 166K mrnaOrientInfo.sql 2020-05-08 00:49 1.8K mrnaOrientInfo.txt.gz 2020-05-08 00:49 18K multiz5way.sql 2007-04-11 11:58 1.4K multiz5way.txt.gz 2007-04-11 11:58 20M multiz5wayFrames.sql 2007-04-11 11:58 1.6K multiz5wayFrames.txt.gz 2007-04-11 11:59 11M multiz5waySummary.sql 2007-04-11 11:59 1.5K multiz5waySummary.txt.gz 2007-04-11 11:59 1.9M netDanRer7.sql 2011-02-27 21:42 2.0K netDanRer7.txt.gz 2011-02-27 21:42 8.5M netGalGal3.sql 2007-04-11 11:59 2.2K netGalGal3.txt.gz 2007-04-11 11:59 3.9M netGasAcu1.sql 2007-04-11 11:59 2.2K netGasAcu1.txt.gz 2007-04-11 12:00 11M netHg19.sql 2009-10-11 05:54 2.3K netHg19.txt.gz 2009-10-11 05:54 5.1M netMm9.sql 2007-09-15 14:47 2.2K netMm9.txt.gz 2007-09-15 14:47 4.9M netOryLat2.sql 2008-11-16 08:34 2.2K netOryLat2.txt.gz 2008-11-16 08:34 12M netTetNig2.sql 2010-03-14 10:52 2.0K netTetNig2.txt.gz 2010-03-14 10:52 16M phastCons5.sql 2007-04-11 12:01 1.7K phastCons5.txt.gz 2007-04-11 12:02 10M phastConsElements5way.sql 2007-04-11 12:02 1.4K phastConsElements5way.txt.gz 2007-04-11 12:02 10M simpleRepeat.sql 2007-04-11 12:02 2.0K simpleRepeat.txt.gz 2007-04-11 12:02 2.7M tRNAs.sql 2012-04-15 21:41 1.7K tRNAs.txt.gz 2012-04-15 21:41 18K tableDescriptions.sql 2019-07-21 03:41 1.4K tableDescriptions.txt.gz 2019-07-21 03:41 6.0K tableList.sql 2021-05-16 03:05 1.6K tableList.txt.gz 2021-05-16 03:05 4.3K trackDb.sql 2020-10-25 08:00 2.0K trackDb.txt.gz 2020-10-25 08:00 30K windowmaskerSdust.sql 2007-04-11 12:02 1.3K windowmaskerSdust.txt.gz 2007-04-11 12:02 12M xenoMrna.sql 2020-08-21 19:09 2.1K xenoMrna.txt.gz 2020-08-21 19:09 231M