This directory contains a dump of the UCSC genome annotation database for
the March 2006 assembly of the cat genome (felCat3, Broad Release 3).
The annotations were generated by UCSC and collaborators worldwide.

This assembly was produced by the Broad Institute at MIT and Harvard.
For more information on the cat genome, see the project website:
http://www.broad.mit.edu/mammals/

Files included in this directory (updated nightly):

  - *.sql files:  the MySQL commands used to create the tables

  - *.txt.gz files: the database tables in a tab-delimited format
    compressed with gzip.

To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
  http://genome.ucsc.edu/cgi-bin/hgTables?db=felCat3
and click the "describe table schema" button.  There is also a "view
table schema" link on the configuration page for each track.

---------------------------------------------------------------
If you plan to download a large file or multiple files from this 
directory, we recommend you use ftp rather than downloading the files 
via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to 
the directory goldenPath/felCat3/database/. To download multiple 
files, use the "mget" command:

    mget <filename1> <filename2> ...
    - or -
    mget -a (to download all the files in the directory) 


All the files and tables in this directory are freely usable for any purpose.

      Name                         Last modified      Size  Description
Parent Directory - all_est.sql 2016-05-15 08:36 2.1K all_est.txt.gz 2016-05-15 08:36 40K all_mrna.sql 2020-08-21 18:26 2.1K all_mrna.txt.gz 2020-08-21 18:26 232K bigFiles.sql 2021-05-16 03:09 1.4K bigFiles.txt.gz 2021-05-16 03:09 33 blastHg18KG.sql 2009-12-20 11:32 2.3K blastHg18KG.txt.gz 2009-12-20 11:32 1.9M chainCanFam2.sql 2007-01-19 16:34 1.7K chainCanFam2.txt.gz 2007-01-19 16:35 80M chainCanFam2Link.sql 2007-01-19 16:35 1.4K chainCanFam2Link.txt.gz 2007-01-19 16:41 522M chainHg19.sql 2009-09-20 09:24 1.8K chainHg19.txt.gz 2009-09-20 09:24 35M chainHg19Link.sql 2009-09-20 09:21 1.5K chainHg19Link.txt.gz 2009-09-20 09:22 341M chainMm8.sql 2007-01-19 16:54 1.6K chainMm8.txt.gz 2007-01-19 16:54 28M chainMm8Link.sql 2007-01-19 16:55 1.4K chainMm8Link.txt.gz 2007-01-19 16:57 237M chromInfo.sql 2007-01-19 17:00 1.2K chromInfo.txt.gz 2007-01-19 17:00 1.1M contigAcc.sql 2007-01-19 17:00 1.2K contigAcc.txt.gz 2007-01-19 17:00 4.0M cpgIslandExt.sql 2007-01-19 17:00 1.6K cpgIslandExt.txt.gz 2007-01-19 17:00 1.1M cpgIslandExtUnmasked.sql 2014-06-01 12:51 1.7K cpgIslandExtUnmasked.txt.gz 2014-06-01 12:51 1.5M ensGene.sql 2012-10-21 03:37 1.9K ensGene.txt.gz 2012-10-21 03:37 1.7M ensGtp.sql 2012-10-21 03:37 1.4K ensGtp.txt.gz 2012-10-21 03:37 180K ensPep.sql 2012-10-21 03:37 1.3K ensPep.txt.gz 2012-10-21 03:37 4.0M ensemblGeneScaffold.sql 2012-10-21 03:37 1.7K ensemblGeneScaffold.txt.gz 2012-10-21 03:37 818K ensemblSource.sql 2012-10-21 03:37 1.4K ensemblSource.txt.gz 2012-10-21 03:37 68K ensemblToGeneName.sql 2012-10-21 03:37 1.4K ensemblToGeneName.txt.gz 2012-10-21 03:37 104K estOrientInfo.sql 2016-05-15 08:36 1.8K estOrientInfo.txt.gz 2016-05-15 08:36 13K extFile.sql 2007-06-21 10:45 1.3K extFile.txt.gz 2007-06-21 10:45 83 gap.sql 2007-01-19 17:00 1.5K gap.txt.gz 2007-01-19 17:00 6.7M gbLoaded.sql 2020-08-21 19:02 1.6K gbLoaded.txt.gz 2020-08-21 19:02 43K gc5Base.sql 2007-01-19 17:01 1.7K gc5Base.txt.gz 2007-01-19 17:02 14M geneid.sql 2007-02-15 09:38 1.9K geneid.txt.gz 2007-02-15 09:38 5.4M geneidPep.sql 2007-02-15 09:38 1.1K geneidPep.txt.gz 2007-02-15 09:38 7.7M genscan.sql 2007-01-19 17:02 1.6K genscan.txt.gz 2007-01-19 17:02 2.7M genscanPep.sql 2007-01-19 17:02 1.2K genscanPep.txt.gz 2007-01-19 17:02 8.6M genscanSubopt.sql 2007-01-19 17:02 1.5K genscanSubopt.txt.gz 2007-01-19 17:02 5.8M gold.sql 2007-01-19 17:02 1.6K gold.txt.gz 2007-01-19 17:02 11M grp.sql 2014-03-02 03:40 1.4K grp.txt.gz 2014-03-02 03:40 208 hgFindSpec.sql 2020-10-25 07:59 1.7K hgFindSpec.txt.gz 2020-10-25 07:59 1.0K history.sql 2010-07-04 15:39 1.6K history.txt.gz 2010-07-04 15:39 530 intronEst.sql 2016-05-15 08:36 2.1K intronEst.txt.gz 2016-05-15 08:36 15K microsat.sql 2007-01-19 17:02 1.3K microsat.txt.gz 2007-01-19 17:02 658K mrnaOrientInfo.sql 2020-08-21 18:44 1.8K mrnaOrientInfo.txt.gz 2020-08-21 18:44 67K multiz4way.sql 2007-06-21 10:45 1.4K multiz4way.txt.gz 2007-06-21 10:46 61M multiz4wayFrames.sql 2007-06-21 10:46 1.6K multiz4wayFrames.txt.gz 2007-06-21 10:47 5.8M multiz4waySummary.sql 2007-06-21 10:47 1.5K multiz4waySummary.txt.gz 2007-06-21 10:47 23K netCanFam2.sql 2007-01-19 17:02 2.2K netCanFam2.txt.gz 2007-01-19 17:03 55M netHg19.sql 2009-09-20 09:24 2.3K netHg19.txt.gz 2009-09-20 09:24 55M netMm8.sql 2007-01-19 17:05 2.2K netMm8.txt.gz 2007-01-19 17:06 41M nscanGene.sql 2007-03-14 11:24 2.0K nscanGene.txt.gz 2007-03-14 11:24 1.5M nscanPep.sql 2007-03-14 11:24 1.1K nscanPep.txt.gz 2007-03-14 11:24 4.0M phastCons4way.sql 2007-06-21 10:47 1.7K phastCons4way.txt.gz 2007-06-21 10:48 49M phastConsElements4way.sql 2007-06-21 10:48 1.4K phastConsElements4way.txt.gz 2007-06-21 10:49 3.3M quality.sql 2007-01-19 17:06 1.7K quality.txt.gz 2007-01-19 17:08 70M refFlat.sql 2020-08-21 18:40 1.7K refFlat.txt.gz 2020-08-21 18:40 32K refGene.sql 2020-08-21 18:40 1.9K refGene.txt.gz 2020-08-21 18:40 35K refSeqAli.sql 2020-08-21 18:45 2.1K refSeqAli.txt.gz 2020-08-21 18:45 44K rmsk.sql 2007-01-19 17:08 1.9K rmsk.txt.gz 2007-01-19 17:09 77M sgpGene.sql 2007-12-22 12:46 1.9K sgpGene.txt.gz 2007-12-22 12:46 1.7M simpleRepeat.sql 2007-01-19 17:10 2.0K simpleRepeat.txt.gz 2007-01-19 17:10 8.6M tRNAs.sql 2012-04-22 23:54 1.7K tRNAs.txt.gz 2012-04-22 23:54 69K tableDescriptions.sql 2019-07-21 03:41 1.4K tableDescriptions.txt.gz 2019-07-21 03:41 6.0K tableList.sql 2021-05-16 03:09 1.6K tableList.txt.gz 2021-05-16 03:09 3.5K trackDb.sql 2020-10-25 07:59 2.0K trackDb.txt.gz 2020-10-25 07:59 32K xenoMrna.sql 2016-02-21 15:32 2.1K xenoMrna.txt.gz 2016-02-21 15:34 294M xenoRefFlat.sql 2020-08-21 18:44 1.7K xenoRefFlat.txt.gz 2020-08-21 18:44 32M xenoRefGene.sql 2020-08-21 18:41 1.9K xenoRefGene.txt.gz 2020-08-21 18:41 36M xenoRefSeqAli.sql 2020-08-21 19:00 2.1K xenoRefSeqAli.txt.gz 2020-08-21 19:00 37M