This directory contains the Drosophila mojavensis 11 August 2004 assembly
from Agencourt Bioscience Corporation. The annotations were generated
by UCSC and collaborators worldwide.
Files included in this directory (updated nightly):
- *.sql files: the MySQL commands used to create the tables.
To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
http://genome.ucsc.edu/cgi-bin/hgTables?db=droMoj1
and click the "describe table schema" button. There is also a "view
table schema" link on the configuration page for each track.
- *.txt.gz files: the database tables in a tab-delimited format
compressed with gzip.
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If you plan to download a large file or multiple files from this directory,
we recommend you use ftp rather than downloading the files via our website.
To do so, ftp to hgdownload.cse.ucsc.edu, then go to the directory
goldenPath/droMoj1/database. To download multiple files, use the "mget"
command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
All the annotations in this directory are freely usable for any purpose.
The D. mojavensis data have been freely provided by Agencourt Bioscience
Corporation before publication for use in the UCSC Genome Browser with the
following understanding:
1. The data may be freely downloaded, used in analyses, and repackaged in
databases.
2. Users are free to use the data in scientific papers analyzing particular
genes and regions, provided that the Agencourt is properly acknowledged.
3. Agencourt reserves the right to publish the initial large-scale analyses
of the dataset, including large-scale identification of regions of
evolutionary conservation and large-scale genomic assembly.
4. Any redistribution of the data should carry this notice.
Name Last modified Size Description
Parent Directory -
chromInfo.txt.gz 2004-12-13 15:27 127K
gap.txt.gz 2004-12-13 15:27 28
gcPercent.txt.gz 2004-12-13 15:28 151K
genscanPep.txt.gz 2004-12-13 15:28 5.1M
history.txt.gz 2004-12-13 15:28 230
rmsk.txt.gz 2004-12-13 15:28 6.8M
simpleRepeat.txt.gz 2004-12-13 15:28 2.6M
genscan.txt.gz 2005-01-09 04:35 869K
blastDm2FB.txt.gz 2005-07-28 05:23 1.3M
geneid.txt.gz 2005-09-23 04:49 1.4M
gbDelete_tmp.txt.gz 2006-01-04 06:06 159K
chainDm2.txt.gz 2006-01-19 05:58 6.5M
chainDm2Link.txt.gz 2006-01-19 05:59 61M
netDm2.txt.gz 2006-01-19 06:00 8.9M
blastDm2FB.sql 2013-10-01 12:48 1.3K
chainDm2.sql 2013-10-01 12:48 878
chainDm2Link.sql 2013-10-01 12:48 577
chromInfo.sql 2013-10-01 12:48 396
gap.sql 2013-10-01 12:48 722
gbDelete_tmp.sql 2013-10-01 12:48 326
gcPercent.sql 2013-10-01 12:48 546
geneid.sql 2013-10-01 12:48 1.0K
genscan.sql 2013-10-01 12:48 748
genscanPep.sql 2013-10-01 12:48 330
history.sql 2013-10-01 12:48 537
netDm2.sql 2013-10-01 12:48 1.3K
rmsk.sql 2013-10-01 12:48 1.1K
simpleRepeat.sql 2013-10-01 12:48 1.1K
grp.sql 2014-03-02 03:40 1.4K
grp.txt.gz 2014-03-02 03:40 223
augustusGene.sql 2015-07-26 12:37 1.9K
augustusGene.txt.gz 2015-07-26 12:37 712K
microsat.sql 2015-08-23 14:52 1.5K
microsat.txt.gz 2015-08-23 14:52 33K
xenoMrna.sql 2016-02-21 14:20 2.4K
xenoMrna.txt.gz 2016-02-21 14:20 119M
all_mrna.sql 2017-10-22 06:29 2.1K
all_mrna.txt.gz 2017-10-22 06:29 2.3K
mrnaOrientInfo.sql 2017-10-22 06:29 1.8K
mrnaOrientInfo.txt.gz 2017-10-22 06:29 689
xenoRefGene.sql 2020-08-21 14:18 2.0K
xenoRefGene.txt.gz 2020-08-21 14:18 12M
xenoRefFlat.sql 2020-08-21 14:18 1.7K
xenoRefFlat.txt.gz 2020-08-21 14:18 11M
xenoRefSeqAli.sql 2020-08-21 14:18 2.1K
xenoRefSeqAli.txt.gz 2020-08-21 14:18 12M
gbLoaded.sql 2020-08-21 14:18 1.6K
gbLoaded.txt.gz 2020-08-21 14:18 15K
trackDb_pushedout.sql 2021-08-02 14:28 2.1K
trackDb_pushedout.txt.gz 2021-08-02 14:28 11K
hgFindSpec_pushedout.sql 2021-08-02 14:28 1.8K
hgFindSpec_pushedout.txt.gz 2021-08-02 14:28 621
trackDb.sql 2023-03-28 13:48 2.1K
trackDb.txt.gz 2023-03-28 13:48 11K
hgFindSpec.sql 2023-03-28 13:48 1.8K
hgFindSpec.txt.gz 2023-03-28 13:48 659
tableDescriptions.sql 2024-04-20 02:03 1.5K
tableDescriptions.txt.gz 2024-04-20 02:03 4.4K
tableList.sql 2024-04-21 03:31 1.6K
tableList.txt.gz 2024-04-21 03:31 2.1K
bigFiles.sql 2024-04-21 03:31 1.4K
bigFiles.txt.gz 2024-04-21 03:31 33