This directory contains the data files required as input to the liftOver utility. This tool -- which requires a Linux platform -- allows the mass conversion of coordinates from one assembly to another. The executable file for the utility can be downloaded from http://hgdownload.cse.ucsc.edu/admin/exe/ The file names reflect the assembly conversion data contained within in the format <db1>To<db2>.over.chain.gz. For example, a file named hg15Tohg16.zip file contains the liftOver data needed to convert hg15 (Human Build 33) coordinates to hg16 (Human Build 34). If no file is available for the assembly in which you're interested, please send a request to the genome mailing list (email@example.com) and we will attempt to provide you with one. To download a large file or multiple files from this directory, we recommend that you use ftp rather than downloading the files via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to the appropriate goldenPath/<assembly>/liftOver directory. To download multiple files, use the "mget" command: mget <filename1> <filename2> ... - or - mget -a (to download all the files in the directory) ------------------------------------------------------- Please refer to the credits page (http://genome.ucsc.edu/goldenPath/credits.html) for guidelines and restrictions regarding data use for these assemblies.
Name Last modified Size Description
Parent Directory - danRer3ToDanRer2.over.chain.gz 2006-05-03 11:07 21M danRer3ToDanRer4.over.chain.gz 2006-06-06 11:05 8.9M danRer3ToFr1.over.chain.gz 2005-08-16 16:03 12M danRer3ToHg18.over.chain.gz 2005-12-24 02:30 6.1M danRer3ToMm7.over.chain.gz 2005-11-17 20:50 6.2M danRer3ToMm8.over.chain.gz 2006-02-28 16:22 4.7M danRer3ToRn4.over.chain.gz 2006-04-02 15:01 4.6M danRer3ToTetNig1.over.chain.gz 2005-10-19 12:54 9.4M md5sum.txt 2006-06-21 17:32 501