This directory contains the Jan. 2020 (ASM985889v3/wuhCor1) assembly of the wuhan seafood market pneumonia virus genome (wuhCor1, 2019-nCoV) in one gzip-compressed FASTA file per chromosome. For more information about this assembly, please note the NCBI resources: https://www.ncbi.nlm.nih.gov/genome/n/a https://www.ncbi.nlm.nih.gov/genome/assembly/15851418 https://www.ncbi.nlm.nih.gov/bioproject/485481 https://www.ncbi.nlm.nih.gov/biosample/n/a Repeats from RepeatMasker and Tandem Repeats Finder (with period of 12 or less) are shown in lower case; non-repeating sequence is shown in upper case. This assembly was produced by ***PLEASE FILL IN SEQUENCING CENTER***. For more information on the wuhan seafood market pneumonia virus genome, see the project website: ***PLEASE INSERT PROJECT URL OR REMOVE THIS STATEMENT*** Files included in this directory: - chr*.fa.gz: compressed FASTA sequence of each chromosome. ------------------------------------------------------------------ If you plan to download a large file or multiple files from this directory, we recommend that you use ftp rather than downloading the files via our website. To do so, ftp to hgdownload.soe.ucsc.edu, then go to the directory goldenPath/wuhCor1/chromosomes. To download multiple files, use the "mget" command: mget <filename1> <filename2> ... - or - mget -a (to download all the files in the directory) Alternate methods to ftp access. Using an rsync command to download the entire directory: rsync -avzP rsync://hgdownload.soe.ucsc.edu/goldenPath/wuhCor1/chromosomes/ . For a single file, e.g. chrM.fa.gz rsync -avzP rsync://hgdownload.soe.ucsc.edu/goldenPath/wuhCor1/chromosomes/chrM.fa.gz . Or with wget, all files: wget --timestamping 'ftp://hgdownload.soe.ucsc.edu/goldenPath/wuhCor1/chromosomes/*' With wget, a single file: wget --timestamping 'ftp://hgdownload.soe.ucsc.edu/goldenPath/wuhCor1/chromosomes/chrM.fa.gz' -O chrM.fa.gz To uncompress the fa.gz files: gunzip <file>.fa.gz ----------------------------------------------------------------------------- GenBank Data Usage The GenBank database is designed to provide and encourage access within the scientific community to the most up to date and comprehensive DNA sequence information. Therefore, NCBI places no restrictions on the use or distribution of the GenBank data. However, some submitters may claim patent, copyright, or other intellectual property rights in all or a portion of the data they have submitted. NCBI is not in a position to assess the validity of such claims, and therefore cannot provide comment or unrestricted permission concerning the use, copying, or distribution of the information contained in GenBank. -----------------------------------------------------------------------------
Name Last modified Size Description
Parent Directory - md5sum.txt 2020-02-04 11:52 97 NC_045512v2.fa.gz 2020-01-30 11:36 9.4K