This directory contains reciprocal-best netted chains for tarSyr2-papAnu2.

 - tarSyr2.papAnu2.rbest.net.gz: tarSyr2-referenced recip.best net to papAnu2.
 - tarSyr2.papAnu2.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from tarSyr2 to papAnu2 through the recip.best net.

 - papAnu2.tarSyr2.rbest.net.gz: papAnu2-referenced recip.best net.
 - papAnu2.tarSyr2.rbest.chain.gz: recip.best "liftOver" chains.

 - directory axtRBestNet/ - reciprocal best alignments in axt file format
   http://genome.ucsc.edu/goldenPath/help/axt.html

      Name                                                   Last modified      Size  Description
      Parent Directory                                                            -   
      axtRBestNet/                                           2014-12-16 13:25    -   
      md5sum.txt                                             2014-12-16 10:14  256   
      papAnu2.tarSyr2.rbest.chain.gz                         2014-12-16 10:11   80M  
      papAnu2.tarSyr2.rbest.net.gz                           2014-12-16 10:10  156M  
      tarSyr2.papAnu2.rbest.chain.gz                         2014-12-16 10:12   80M  
      tarSyr2.papAnu2.rbest.net.gz                           2014-12-16 10:13  129M