This directory contains reciprocal-best netted chains for susScr11-hg19. - susScr11.hg19.rbest.net.gz: susScr11-referenced recip.best net to hg19. - susScr11.hg19.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from susScr11 to hg19 through the recip.best net. - hg19.susScr11.rbest.net.gz: hg19-referenced recip.best net. - hg19.susScr11.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/susScr11.hg19.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2018-04-06 23:14 - md5sum.txt 2018-04-06 13:25 248 susScr11.hg19.rbest.chain.gz 2018-04-06 13:23 79M hg19.susScr11.rbest.chain.gz 2018-04-06 13:21 79M susScr11.hg19.rbest.net.gz 2018-04-06 13:25 128M hg19.susScr11.rbest.net.gz 2018-04-06 13:20 148M