This directory contains reciprocal-best netted chains for rn6-danRer10.

 - rn6.danRer10.rbest.net.gz: rn6-referenced recip.best net to danRer10.
 - rn6.danRer10.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from rn6 to danRer10 through the recip.best net.

 - danRer10.rn6.rbest.net.gz: danRer10-referenced recip.best net.
 - danRer10.rn6.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/rn6.danRer10.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                                                     Last modified      Size  Description
      Parent Directory                                                              -   
      rn6.danRer10.rbest.net.gz                                2015-09-24 12:04  9.4M  
      rn6.danRer10.rbest.chain.gz                              2015-09-24 12:04  5.8M  
      md5sum.txt                                               2015-09-24 12:04  244   
      danRer10.rn6.rbest.net.gz                                2015-09-24 12:03  9.7M  
      danRer10.rn6.rbest.chain.gz                              2015-09-24 12:03  5.8M  
      axtRBestNet/                                             2015-09-24 12:11    -