This directory contains reciprocal-best netted chains for ponAbe3-hg19. - ponAbe3.hg19.rbest.net.gz: ponAbe3-referenced recip.best net to hg19. - ponAbe3.hg19.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from ponAbe3 to hg19 through the recip.best net. - hg19.ponAbe3.rbest.net.gz: hg19-referenced recip.best net. - hg19.ponAbe3.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/ponAbe3.hg19.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2021-06-30 14:28 - md5sum.txt 2018-12-17 09:41 244 hg19.ponAbe3.rbest.chain.gz 2018-12-17 09:40 20M ponAbe3.hg19.rbest.chain.gz 2018-12-17 09:41 20M ponAbe3.hg19.rbest.net.gz 2018-12-17 09:41 33M hg19.ponAbe3.rbest.net.gz 2018-12-17 09:40 34M