This directory contains reciprocal-best netted chains for petMar3-galGal6. - petMar3.galGal6.rbest.net.gz: petMar3-referenced recip.best net to galGal6. - petMar3.galGal6.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from petMar3 to galGal6 through the recip.best net. - galGal6.petMar3.rbest.net.gz: galGal6-referenced recip.best net. - galGal6.petMar3.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/petMar3.galGal6.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2018-10-26 11:51 - md5sum.txt 2018-10-26 10:49 256 petMar3.galGal6.rbest.chain.gz 2018-10-26 10:49 3.6M galGal6.petMar3.rbest.chain.gz 2018-10-26 10:49 3.6M petMar3.galGal6.rbest.net.gz 2018-10-26 10:49 5.8M galGal6.petMar3.rbest.net.gz 2018-10-26 10:49 6.0M