This directory contains reciprocal-best netted chains for neoSch1-mm39. - neoSch1.mm39.rbest.net.gz: neoSch1-referenced recip.best net to mm39. - neoSch1.mm39.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from neoSch1 to mm39 through the recip.best net. - mm39.neoSch1.rbest.net.gz: mm39-referenced recip.best net. - mm39.neoSch1.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/neoSch1.mm39.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2021-03-15 16:04 - md5sum.txt 2020-11-25 02:29 244 mm39.neoSch1.rbest.chain.gz 2020-11-25 02:27 59M neoSch1.mm39.rbest.chain.gz 2020-11-25 02:28 59M mm39.neoSch1.rbest.net.gz 2020-11-25 02:26 92M neoSch1.mm39.rbest.net.gz 2020-11-25 02:29 123M