This directory contains reciprocal-best netted chains for neoSch1-loxAfr3. - neoSch1.loxAfr3.rbest.net.gz: neoSch1-referenced recip.best net to loxAfr3. - neoSch1.loxAfr3.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from neoSch1 to loxAfr3 through the recip.best net. - loxAfr3.neoSch1.rbest.net.gz: loxAfr3-referenced recip.best net. - loxAfr3.neoSch1.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/neoSch1.loxAfr3.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2020-11-23 13:35 - md5sum.txt 2020-07-15 19:02 256 neoSch1.loxAfr3.rbest.net.gz 2020-07-15 19:02 128M neoSch1.loxAfr3.rbest.chain.gz 2020-07-15 19:00 74M loxAfr3.neoSch1.rbest.chain.gz 2020-07-15 18:59 74M loxAfr3.neoSch1.rbest.net.gz 2020-07-15 18:58 145M