This directory contains reciprocal-best netted chains for nanPar1-xenTro7.
- nanPar1.xenTro7.rbest.net.gz: nanPar1-referenced recip.best net to xenTro7.
- nanPar1.xenTro7.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from nanPar1 to xenTro7 through the recip.best net.
- xenTro7.nanPar1.rbest.net.gz: xenTro7-referenced recip.best net.
- xenTro7.nanPar1.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/nanPar1.xenTro7.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2015-06-15 10:00 -
md5sum.txt 2015-06-15 09:54 256
nanPar1.xenTro7.rbest.chain.gz 2015-06-15 09:54 7.1M
nanPar1.xenTro7.rbest.net.gz 2015-06-15 09:54 12M
xenTro7.nanPar1.rbest.chain.gz 2015-06-15 09:54 7.1M
xenTro7.nanPar1.rbest.net.gz 2015-06-15 09:54 12M