This directory contains reciprocal-best netted chains for mm39-rheMac10.
- mm39.rheMac10.rbest.net.gz: mm39-referenced recip.best net to rheMac10.
- mm39.rheMac10.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from mm39 to rheMac10 through the recip.best net.
- rheMac10.mm39.rbest.net.gz: rheMac10-referenced recip.best net.
- rheMac10.mm39.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/*.mm39.rheMac10.net.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
rheMac10.mm39.rbest.net.gz 2020-10-21 08:49 139M
rheMac10.mm39.rbest.chain.gz 2020-10-21 08:50 65M
mm39.rheMac10.rbest.chain.gz 2020-10-21 08:51 64M
mm39.rheMac10.rbest.net.gz 2020-10-21 08:52 91M
md5sum.txt 2020-10-21 08:52 248
axtRBestNet/ 2021-03-15 15:46 -