This directory contains reciprocal-best netted chains for monDom5-xenTro9.

 - monDom5.xenTro9.rbest.net.gz: monDom5-referenced recip.best net to xenTro9.
 - monDom5.xenTro9.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from monDom5 to xenTro9 through the recip.best net.

 - xenTro9.monDom5.rbest.net.gz: xenTro9-referenced recip.best net.
 - xenTro9.monDom5.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/*.monDom5.xenTro9.net.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                                                        Last modified      Size  Description
      Parent Directory                                                                 -   
      axtRBestNet/                                                2017-04-07 21:39    -   
      md5sum.txt                                                  2017-04-07 07:10  256   
      monDom5.xenTro9.rbest.chain.gz                              2017-04-07 07:09  4.8M  
      monDom5.xenTro9.rbest.net.gz                                2017-04-07 07:10  8.5M  
      xenTro9.monDom5.rbest.chain.gz                              2017-04-07 07:09  4.8M  
      xenTro9.monDom5.rbest.net.gz                                2017-04-07 07:09  8.3M