This directory contains reciprocal-best netted chains for monDom5-xenTro9.
- monDom5.xenTro9.rbest.net.gz: monDom5-referenced recip.best net to xenTro9.
- monDom5.xenTro9.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from monDom5 to xenTro9 through the recip.best net.
- xenTro9.monDom5.rbest.net.gz: xenTro9-referenced recip.best net.
- xenTro9.monDom5.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/*.monDom5.xenTro9.net.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
xenTro9.monDom5.rbest.net.gz 2017-04-07 07:09 8.3M
xenTro9.monDom5.rbest.chain.gz 2017-04-07 07:09 4.8M
monDom5.xenTro9.rbest.chain.gz 2017-04-07 07:09 4.8M
md5sum.txt 2017-04-07 07:10 256
monDom5.xenTro9.rbest.net.gz 2017-04-07 07:10 8.5M
axtRBestNet/ 2017-04-07 21:39 -