This directory contains reciprocal-best netted chains for hg38-papAnu3.
- hg38.papAnu3.rbest.net.gz: hg38-referenced recip.best net to papAnu3.
- hg38.papAnu3.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from hg38 to papAnu3 through the recip.best net.
- papAnu3.hg38.rbest.net.gz: papAnu3-referenced recip.best net.
- papAnu3.hg38.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/hg38.papAnu3.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2017-06-22 23:34 -
hg38.papAnu3.rbest.chain.gz 2017-06-22 15:28 36M
hg38.papAnu3.rbest.net.gz 2017-06-22 15:29 61M
md5sum.txt 2017-06-22 15:29 244
papAnu3.hg38.rbest.chain.gz 2017-06-22 15:27 36M
papAnu3.hg38.rbest.net.gz 2017-06-22 15:27 58M