This directory contains reciprocal-best netted chains for hg38-ornAna2.

 - hg38.ornAna2.rbest.net.gz: hg38-referenced recip.best net to ornAna2.
 - hg38.ornAna2.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from hg38 to ornAna2 through the recip.best net.

 - ornAna2.hg38.rbest.net.gz: ornAna2-referenced recip.best net.
 - ornAna2.hg38.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/hg38.ornAna2.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                                               Last modified      Size  Description
      Parent Directory                                                        -   
      ornAna2.hg38.rbest.net.gz                          2017-02-23 09:47   30M  
      ornAna2.hg38.rbest.chain.gz                        2017-02-23 09:47   17M  
      hg38.ornAna2.rbest.chain.gz                        2017-02-23 09:47   17M  
      hg38.ornAna2.rbest.net.gz                          2017-02-23 09:48   29M  
      md5sum.txt                                         2017-02-23 09:48  244   
      axtRBestNet/                                       2017-02-23 22:54    -