This directory contains reciprocal-best netted chains for hg38-eulMac1.
- hg38.eulMac1.rbest.net.gz: hg38-referenced recip.best net to eulMac1.
- hg38.eulMac1.rbest.chain.gz: chains extracted from the recip.best
net. These can be passed to the liftOver program to translate coords
from hg38 to eulMac1 through the recip.best net.
- eulMac1.hg38.rbest.net.gz: eulMac1-referenced recip.best net.
- eulMac1.hg38.rbest.chain.gz: recip.best "liftOver" chains.
- axtRBestNet/hg38.eulMac1.rbest.axt.gz reciprocal best alignments in
AXT format
See also, description of AXT format::
http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory -
axtRBestNet/ 2017-10-05 13:05 -
eulMac1.hg38.rbest.chain.gz 2017-10-05 09:26 39M
eulMac1.hg38.rbest.net.gz 2017-10-05 09:26 75M
hg38.eulMac1.rbest.chain.gz 2017-10-05 09:27 39M
hg38.eulMac1.rbest.net.gz 2017-10-05 09:28 76M
md5sum.txt 2017-10-05 09:28 244