This directory contains reciprocal-best netted chains for echTel2-mm39.

 - echTel2.mm39.rbest.net.gz: echTel2-referenced recip.best net to mm39.
 - echTel2.mm39.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from echTel2 to mm39 through the recip.best net.

 - mm39.echTel2.rbest.net.gz: mm39-referenced recip.best net.
 - mm39.echTel2.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/echTel2.mm39.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                                                 Last modified      Size  Description
      Parent Directory                                                          -   
      axtRBestNet/                                         2021-03-15 14:54    -   
      md5sum.txt                                           2020-11-25 06:10  244   
      mm39.echTel2.rbest.chain.gz                          2020-11-25 06:09   28M  
      echTel2.mm39.rbest.chain.gz                          2020-11-25 06:09   28M  
      mm39.echTel2.rbest.net.gz                            2020-11-25 06:08   48M  
      echTel2.mm39.rbest.net.gz                            2020-11-25 06:10   53M