This directory contains the Drosophila persimilis 28 October 2005 assembly
from the Broad Institute at MIT and Harvard. The annotations are from
UCSC and collaborators worldwide.
Files are updated nightly. The .txt.gz files contain the
database tables in a tab-delimited format compressed with gzip.
The .sql files contain the MySQL commands used to create the tables.
To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
http://genome.ucsc.edu/cgi-bin/hgTables?db=droPer1
and click the "describe table schema" button. There is also a "view
table schema" link on the configuration page for each track.
If you plan to download a large file or multiple files from
this directory, we recommend that you use ftp rather than
downloading the files via our website. To do so, ftp to
hgdownload.cse.ucsc.edu, then go to the directory
goldenPath/droPer1/database. To download multiple files,
use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
All the tables in this directory are freely usable for any
purpose.
Name Last modified Size Description
Parent Directory -
blastDm2FB.txt.gz 2006-01-06 05:52 1.4M
chromInfo.txt.gz 2006-01-06 05:54 45K
gap.txt.gz 2006-01-06 05:54 170K
gc5Base.txt.gz 2006-01-06 05:54 940K
genscan.txt.gz 2006-01-06 05:54 887K
genscanPep.txt.gz 2006-01-06 05:55 5.4M
gold.txt.gz 2006-01-06 05:55 299K
history.txt.gz 2006-01-06 05:55 233
rmsk.txt.gz 2006-01-06 05:55 3.5M
simpleRepeat.txt.gz 2006-01-06 05:55 1.9M
blastDm2FB.sql 2013-10-01 12:48 1.3K
chromInfo.sql 2013-10-01 12:48 396
gap.sql 2013-10-01 12:48 722
gc5Base.sql 2013-10-01 12:48 892
genscan.sql 2013-10-01 12:48 748
genscanPep.sql 2013-10-01 12:48 330
gold.sql 2013-10-01 12:48 799
history.sql 2013-10-01 12:48 537
rmsk.sql 2013-10-01 12:48 1.0K
simpleRepeat.sql 2013-10-01 12:48 1.1K
grp.sql 2014-03-02 03:40 1.4K
grp.txt.gz 2014-03-02 03:40 222
chainDm6.sql 2014-12-14 12:46 1.7K
chainDm6.txt.gz 2014-12-14 12:46 6.7M
chainDm6Link.sql 2014-12-14 12:46 1.5K
chainDm6Link.txt.gz 2014-12-14 12:46 60M
netDm6.sql 2014-12-14 12:47 2.1K
netDm6.txt.gz 2014-12-14 12:47 7.8M
augustusGene.sql 2015-07-26 12:49 1.9K
augustusGene.txt.gz 2015-07-26 12:49 836K
microsat.sql 2015-08-23 15:04 1.5K
microsat.txt.gz 2015-08-23 15:04 11K
xenoMrna.sql 2016-02-21 14:32 2.1K
xenoMrna.txt.gz 2016-02-21 14:32 110M
ncbiRefSeq.sql 2018-02-09 13:35 2.0K
ncbiRefSeq.txt.gz 2018-02-09 13:35 716K
ncbiRefSeqPredicted.sql 2018-02-09 13:35 2.0K
ncbiRefSeqPredicted.txt.gz 2018-02-09 13:35 716K
ncbiRefSeqLink.sql 2018-02-09 13:35 2.0K
ncbiRefSeqLink.txt.gz 2018-02-09 13:35 500K
ncbiRefSeqPsl.sql 2018-02-09 13:36 2.1K
ncbiRefSeqPsl.txt.gz 2018-02-09 13:36 839K
extNcbiRefSeq.sql 2018-02-09 14:05 1.5K
extNcbiRefSeq.txt.gz 2018-02-09 14:05 90
ncbiRefSeqCds.sql 2018-02-09 14:05 1.4K
ncbiRefSeqCds.txt.gz 2018-02-09 14:05 79K
ncbiRefSeqOther.sql 2018-02-09 14:05 1.3K
ncbiRefSeqOther.txt.gz 2018-02-09 14:05 75
ncbiRefSeqPepTable.sql 2018-02-09 14:05 1.4K
ncbiRefSeqPepTable.txt.gz 2018-02-09 14:05 4.0M
seqNcbiRefSeq.sql 2018-02-09 14:05 1.6K
seqNcbiRefSeq.txt.gz 2018-02-09 14:05 247K
chromAlias.sql 2018-02-18 06:18 1.4K
chromAlias.txt.gz 2018-02-18 06:18 117K
ucscToRefSeq.sql 2018-02-18 06:18 1.4K
ucscToRefSeq.txt.gz 2018-02-18 06:18 78K
xenoRefGene.sql 2020-08-19 02:47 2.0K
xenoRefGene.txt.gz 2020-08-19 02:47 13M
xenoRefFlat.sql 2020-08-19 02:47 1.7K
xenoRefFlat.txt.gz 2020-08-19 02:47 12M
xenoRefSeqAli.sql 2020-08-19 02:47 2.1K
xenoRefSeqAli.txt.gz 2020-08-19 02:47 14M
gbLoaded.sql 2020-08-19 02:47 1.6K
gbLoaded.txt.gz 2020-08-19 02:47 31K
trackDb.sql 2023-12-05 13:51 2.1K
trackDb.txt.gz 2023-12-05 13:51 19K
hgFindSpec.sql 2023-12-05 13:51 1.8K
hgFindSpec.txt.gz 2023-12-05 13:51 891
tableDescriptions.sql 2024-11-23 02:03 1.5K
tableDescriptions.txt.gz 2024-11-23 02:03 5.4K
tableList.sql 2024-11-24 03:18 1.6K
tableList.txt.gz 2024-11-24 03:18 2.3K
bigFiles.sql 2024-11-24 03:18 1.4K
bigFiles.txt.gz 2024-11-24 03:18 73