This directory contains reciprocal-best netted chains for chlSab2-hg38. - chlSab2.hg38.rbest.net.gz: chlSab2-referenced recip.best net to hg38. - chlSab2.hg38.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from chlSab2 to hg38 through the recip.best net. - hg38.chlSab2.rbest.net.gz: hg38-referenced recip.best net. - hg38.chlSab2.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/chlSab2.hg38.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2016-09-27 13:57 - md5sum.txt 2016-09-27 08:27 244 hg38.chlSab2.rbest.chain.gz 2016-09-27 08:26 34M chlSab2.hg38.rbest.chain.gz 2016-09-27 08:26 34M chlSab2.hg38.rbest.net.gz 2016-09-27 08:27 54M hg38.chlSab2.rbest.net.gz 2016-09-27 08:25 58M