This directory contains reciprocal-best netted chains for canFam6-hg38. - canFam6.hg38.rbest.net.gz: canFam6-referenced recip.best net to hg38. - canFam6.hg38.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from canFam6 to hg38 through the recip.best net. - hg38.canFam6.rbest.net.gz: hg38-referenced recip.best net. - hg38.canFam6.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/canFam6.hg38.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2021-11-22 16:43 - canFam6.hg38.rbest.chain.gz 2021-05-18 19:51 81M canFam6.hg38.rbest.net.gz 2021-05-18 19:53 134M hg38.canFam6.rbest.chain.gz 2021-05-18 19:50 81M hg38.canFam6.rbest.net.gz 2021-05-18 19:49 149M md5sum.txt 2021-05-18 19:53 244