This directory contains reciprocal-best netted chains for calJac4-macFas5. - calJac4.macFas5.rbest.net.gz: calJac4-referenced recip.best net to macFas5. - calJac4.macFas5.rbest.chain.gz: chains extracted from the recip.best net. These can be passed to the liftOver program to translate coords from calJac4 to macFas5 through the recip.best net. - macFas5.calJac4.rbest.net.gz: macFas5-referenced recip.best net. - macFas5.calJac4.rbest.chain.gz: recip.best "liftOver" chains. - axtRBestNet/calJac4.macFas5.rbest.axt.gz reciprocal best alignments in AXT format See also, description of AXT format:: http://genome.ucsc.edu/goldenPath/help/axt.html description of CHAIN format: http://genome.ucsc.edu/goldenPath/help/chain.html description of NET format: http://genome.ucsc.edu/goldenPath/help/net.html
Name Last modified Size Description
Parent Directory - axtRBestNet/ 2021-02-16 15:01 - md5sum.txt 2020-11-03 09:15 256 calJac4.macFas5.rbest.net.gz 2020-11-03 09:15 86M calJac4.macFas5.rbest.chain.gz 2020-11-03 09:14 58M macFas5.calJac4.rbest.chain.gz 2020-11-03 09:13 58M macFas5.calJac4.rbest.net.gz 2020-11-03 09:12 109M