This directory contains reciprocal-best netted chains for anoCar2-xenTro9.

 - anoCar2.xenTro9.rbest.net.gz: anoCar2-referenced recip.best net to xenTro9.
 - anoCar2.xenTro9.rbest.chain.gz: chains extracted from the recip.best
   net.  These can be passed to the liftOver program to translate coords
   from anoCar2 to xenTro9 through the recip.best net.

 - xenTro9.anoCar2.rbest.net.gz: xenTro9-referenced recip.best net.
 - xenTro9.anoCar2.rbest.chain.gz: recip.best "liftOver" chains.

 - axtRBestNet/anoCar2.xenTro9.rbest.axt.gz reciprocal best alignments in
   AXT format

See also, description of AXT format::
    http://genome.ucsc.edu/goldenPath/help/axt.html
description of CHAIN format:
    http://genome.ucsc.edu/goldenPath/help/chain.html
description of NET format:
    http://genome.ucsc.edu/goldenPath/help/net.html

      Name                                                      Last modified      Size  Description
Parent Directory - axtRBestNet/ 2017-04-08 07:02 - md5sum.txt 2017-04-08 00:54 256 anoCar2.xenTro9.rbest.net.gz 2017-04-08 00:54 8.8M anoCar2.xenTro9.rbest.chain.gz 2017-04-08 00:54 5.0M xenTro9.anoCar2.rbest.chain.gz 2017-04-08 00:54 5.0M xenTro9.anoCar2.rbest.net.gz 2017-04-08 00:54 8.6M