This directory contains the Oct 2005 2X assembly of the
Cavia porcellus (guinea pig) genome (cavPor2, Broad Release 2).
Files included in this directory:
cavPor2.agp.gz - Description of how the assembly was generated from
fragments.
cavPor2.fa.gz - "Soft-masked" assembly sequence in one file.
Repeats from Windowmasker are shown in lower case
md5sum.txt - checksums of files in this directory
cavPor2.chrom.sizes - Two-column tab-separated text file containing assembly
sequence names and sizes.
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If you plan to download a large file or multiple files from this
directory, we recommend that you use ftp rather than downloading the
files via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then
go to the directory goldenPath/cavPor2/bigZips. To download multiple
files, use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
Name Last modified Size Description
Parent Directory -
cavPor2.agp.gz 2007-06-05 22:30 15M
cavPor2.chrom.sizes 2007-03-04 15:01 5.9M
cavPor2.fa.gz 2007-06-05 22:22 655M
md5sum.txt 2007-06-05 22:31 97