This directory contains a dump of the UCSC genome annotation database for
the Mar. 2006 assembly of the C. remanei genome (caeRem2, WUSTL School of 
Medicine GSC C. remanei 1.0). The annotations were generated by UCSC
and collaborators worldwide.

This assembly was produced by the Genome Sequencing Center at
the Washington University School of Medicine in St. Louis (WUSTL).
For more information on the C. remanei genome, see the project website:
http://genome.wustl.edu/genome.cgi?GENOME=Caenorhabditis+remanei.

Files included in this directory (updated nightly):

  - *.sql files:  the MySQL commands used to create the tables

  - *.txt.gz files: the database tables in a tab-delimited format
    compressed with gzip.

To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
  http://genome.ucsc.edu/cgi-bin/hgTables?db=caeRem2
and click the "describe table schema" button.  There is also a "view
table schema" link on the configuration page for each track.

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If you plan to download a large file or multiple files from this 
directory, we recommend you use ftp rather than downloading the files 
via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to 
the directory goldenPath/caeRem2/database/. To download multiple 
files, use the "mget" command:

    mget <filename1> <filename2> ...
    - or -
    mget -a (to download all the files in the directory) 

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The C. remanei sequence is made freely available to the community by the
Genome Sequencing Center at the WUSTL School of Medicine. Please see the
WUSTL data use policy at http://genome.wustl.edu/data.cgi for data use
restrictions and citation information.
      Name                          Last modified      Size  Description
Parent Directory - all_est.sql 2016-06-05 09:11 2.1K all_est.txt.gz 2016-06-05 09:11 1.3M all_mrna.sql 2016-05-15 07:46 2.1K all_mrna.txt.gz 2016-05-15 07:46 15K augustusGene.sql 2015-07-26 10:40 1.9K augustusGene.txt.gz 2015-07-26 10:40 2.1M bigFiles.sql 2021-05-09 03:05 1.4K bigFiles.txt.gz 2021-05-09 03:05 33 blastCe4SG.sql 2007-08-03 15:06 2.1K blastCe4SG.txt.gz 2007-08-03 15:06 1.8M chrUn_chainCaePb1.sql 2007-08-03 15:06 1.7K chrUn_chainCaePb1.txt.gz 2007-08-03 15:09 199M chrUn_chainCaePb1Link.sql 2007-08-03 15:12 1.4K chrUn_chainCaePb1Link.txt.gz 2007-08-03 15:18 471M chrUn_chainCb3.sql 2007-08-03 15:25 1.7K chrUn_chainCb3.txt.gz 2007-08-03 15:26 42M chrUn_chainCb3Link.sql 2007-08-03 15:26 1.4K chrUn_chainCb3Link.txt.gz 2007-08-03 15:28 131M chrUn_chainCe4.sql 2007-08-03 15:29 1.7K chrUn_chainCe4.txt.gz 2007-08-03 15:29 6.7M chrUn_chainCe4Link.sql 2007-08-03 15:30 1.4K chrUn_chainCe4Link.txt.gz 2007-08-03 15:30 32M chrUn_chainPriPac1.sql 2007-08-03 15:31 1.7K chrUn_chainPriPac1.txt.gz 2007-08-03 15:31 3.2M chrUn_chainPriPac1Link.sql 2007-08-03 15:31 1.4K chrUn_chainPriPac1Link.txt.gz 2007-08-03 15:31 8.8M chrUn_gap.sql 2007-08-03 15:31 1.5K chrUn_gap.txt.gz 2007-08-03 15:31 348K chrUn_gold.sql 2007-08-03 15:31 1.6K chrUn_gold.txt.gz 2007-08-03 15:31 162K chrUn_rmsk.sql 2007-08-03 15:31 1.9K chrUn_rmsk.txt.gz 2007-08-03 15:31 616K chromInfo.sql 2007-08-03 15:31 1.2K chromInfo.txt.gz 2007-08-03 15:31 70 ctgPos2.sql 2007-08-03 15:31 1.4K ctgPos2.txt.gz 2007-08-03 15:31 373K estOrientInfo.sql 2016-06-05 09:11 1.8K estOrientInfo.txt.gz 2016-06-05 09:11 270K gbLoaded.sql 2020-08-21 00:04 1.6K gbLoaded.txt.gz 2020-08-21 00:04 43K gc5Base.sql 2007-08-03 15:33 1.7K gc5Base.txt.gz 2007-08-03 15:33 706K grp.sql 2014-03-02 03:40 1.4K grp.txt.gz 2014-03-02 03:40 208 hgFindSpec.sql 2019-06-25 10:57 1.7K hgFindSpec.txt.gz 2019-06-25 10:57 581 history.sql 2007-08-03 15:33 1.4K history.txt.gz 2007-08-03 15:33 507 intronEst.sql 2016-06-05 09:11 2.1K intronEst.txt.gz 2016-06-05 09:11 1.0M microsat.sql 2015-08-23 11:01 1.5K microsat.txt.gz 2015-08-23 11:01 2.2K mrnaOrientInfo.sql 2016-05-15 07:46 1.8K mrnaOrientInfo.txt.gz 2016-05-15 07:46 4.5K netCaePb1.sql 2007-08-03 15:33 2.2K netCaePb1.txt.gz 2007-08-03 15:33 6.7M netCb3.sql 2007-08-03 15:33 2.2K netCb3.txt.gz 2007-08-03 15:34 5.1M netCe4.sql 2007-08-03 15:34 2.2K netCe4.txt.gz 2007-08-03 15:34 4.1M netPriPac1.sql 2007-08-03 15:34 2.2K netPriPac1.txt.gz 2007-08-03 15:34 1.1M simpleRepeat.sql 2007-08-03 15:34 2.0K simpleRepeat.txt.gz 2007-08-03 15:34 1.2M tRNAs.sql 2012-04-22 19:16 1.7K tRNAs.txt.gz 2012-04-22 19:16 23K tableDescriptions.sql 2019-07-21 03:41 1.4K tableDescriptions.txt.gz 2019-07-21 03:41 5.0K tableList.sql 2021-05-09 03:05 1.6K tableList.txt.gz 2021-05-09 03:05 2.7K trackDb.sql 2019-06-25 10:57 2.0K trackDb.txt.gz 2019-06-25 10:57 16K windowmaskerSdust.sql 2007-08-03 15:34 1.3K windowmaskerSdust.txt.gz 2007-08-03 15:34 7.3M xenoMrna.sql 2016-02-21 10:50 2.3K xenoMrna.txt.gz 2016-02-21 10:50 89M xenoRefFlat.sql 2020-08-20 23:58 1.7K xenoRefFlat.txt.gz 2020-08-20 23:58 10M xenoRefGene.sql 2020-08-20 23:58 1.9K xenoRefGene.txt.gz 2020-08-20 23:58 12M xenoRefSeqAli.sql 2020-08-21 00:04 2.1K xenoRefSeqAli.txt.gz 2020-08-21 00:04 12M