This directory contains the tables from the UCSC Genome Browser
database for the Apis mellifera Amel_2.0 assembly (apiMel2, Jan. 2005) 
from the Baylor College of Medicine HGSC Honey Bee Genome Project. 
For more information, see the Baylor website: 
http://www.hgsc.bcm.tmc.edu/projects/honeybee/.

Files included in this directory (updated nightly):

  - *.sql files: the MySQL commands used to create the tables.
    To see descriptions of the tables underlying Genome Browser annotation
    tracks, select the table in the Table Browser:
      http://genome.ucsc.edu/cgi-bin/hgTables?db=apiMel2
    and click the "describe table schema" button.  There is also a "view
    table schema" link on the configuration page for each track.

  - *.txt.gz files: the database tables in a tab-delimited format 
    compressed with gzip. 

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If you plan to download a large file or multiple files from this 
directory, we recommend you use ftp rather than downloading the files 
via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to 
the directory goldenPath/apiMel2/database/. To download multiple 
files, use the "mget" command:

    mget <filename1> <filename2> ...
    - or -
    mget -a (to download all the files in the directory) 

All the annotations in this directory are freely usable for any purpose. 
For conditions of use regarding the A. mellifera  sequence data, see
http://www.hgsc.bcm.tmc.edu/projects/conditions_for_use.html.
      Name                        Last modified      Size  Description
Parent Directory - bigFiles.txt.gz 2021-06-06 11:27 33 grp.txt.gz 2014-03-02 03:37 223 chromInfo.txt.gz 2005-02-23 16:08 244 ensPep.sql 2013-10-01 12:48 322 gbDelete_tmp.sql 2013-10-01 12:48 326 genscanPep.sql 2013-10-01 12:48 330 history.txt.gz 2005-02-23 16:08 357 chromInfo.sql 2013-10-01 12:48 396 history.sql 2013-10-01 12:48 537 scaffolds.sql 2013-10-01 12:48 592 gap.sql 2013-10-01 12:48 722 genscan.sql 2013-10-01 12:48 748 brhInparalog.sql 2013-10-01 12:48 756 gold.sql 2013-10-01 12:48 799 gc5Base.sql 2013-10-01 12:48 891 hgFindSpec.txt.gz 2020-12-06 07:38 939 geneid.sql 2013-10-01 12:48 1.0K ensGene.sql 2013-10-01 12:48 1.0K modelRefGene.sql 2013-10-01 12:48 1.0K rmsk.sql 2013-10-01 12:48 1.1K simpleRepeat.sql 2013-10-01 12:48 1.1K blastDm2FB.sql 2013-10-01 12:48 1.3K blastHg17KG.sql 2013-10-01 12:48 1.3K bigFiles.sql 2021-06-06 11:27 1.4K grp.sql 2014-03-02 03:37 1.4K Group1_chainDm2Link.sql 2006-11-04 07:08 1.4K Group2_chainDm2Link.sql 2006-11-04 07:08 1.4K Group3_chainDm2Link.sql 2006-11-04 07:08 1.4K Group4_chainDm2Link.sql 2006-11-04 07:08 1.4K Group5_chainDm2Link.sql 2006-11-04 07:09 1.4K Group6_chainDm2Link.sql 2006-11-04 07:09 1.4K Group7_chainDm2Link.sql 2006-11-04 07:09 1.4K Group8_chainDm2Link.sql 2006-11-04 07:09 1.4K Group9_chainDm2Link.sql 2006-11-04 07:09 1.4K Group10_chainDm2Link.sql 2006-11-04 07:08 1.4K Group11_chainDm2Link.sql 2006-11-04 07:08 1.4K Group12_chainDm2Link.sql 2006-11-04 07:08 1.4K Group13_chainDm2Link.sql 2006-11-04 07:08 1.4K Group14_chainDm2Link.sql 2006-11-04 07:08 1.4K Group15_chainDm2Link.sql 2006-11-04 07:08 1.4K Group16_chainDm2Link.sql 2006-11-04 07:08 1.4K GroupUn_chainDm2Link.sql 2006-11-04 07:09 1.4K tableDescriptions.sql 2019-07-21 03:41 1.4K microsat.sql 2015-08-23 09:54 1.5K tableList.sql 2021-06-06 11:27 1.6K gbLoaded.sql 2020-08-18 05:22 1.7K Group1_chainDm2.sql 2006-11-04 07:08 1.7K Group2_chainDm2.sql 2006-11-04 07:08 1.7K Group3_chainDm2.sql 2006-11-04 07:08 1.7K Group4_chainDm2.sql 2006-11-04 07:08 1.7K Group5_chainDm2.sql 2006-11-04 07:09 1.7K Group6_chainDm2.sql 2006-11-04 07:09 1.7K Group7_chainDm2.sql 2006-11-04 07:09 1.7K Group8_chainDm2.sql 2006-11-04 07:09 1.7K Group9_chainDm2.sql 2006-11-04 07:09 1.7K Group10_chainDm2.sql 2006-11-04 07:08 1.7K Group11_chainDm2.sql 2006-11-04 07:08 1.7K Group12_chainDm2.sql 2006-11-04 07:08 1.7K Group13_chainDm2.sql 2006-11-04 07:08 1.7K Group14_chainDm2.sql 2006-11-04 07:08 1.7K Group15_chainDm2.sql 2006-11-04 07:08 1.7K Group16_chainDm2.sql 2006-11-04 07:08 1.7K GroupUn_chainDm2.sql 2006-11-04 07:09 1.7K xenoRefFlat.sql 2020-08-18 05:07 1.7K hgFindSpec.sql 2020-12-06 07:38 1.7K estOrientInfo.sql 2016-06-12 06:06 1.9K mrnaOrientInfo.sql 2020-08-18 04:58 1.9K xenoRefGene.sql 2020-08-18 05:07 1.9K augustusGene.sql 2015-07-26 10:11 1.9K trackDb.sql 2020-12-06 07:38 2.0K xenoRefSeqAli.sql 2020-08-18 05:20 2.1K netDm2.sql 2006-11-04 07:08 2.2K all_est.sql 2016-06-12 06:06 2.4K all_mrna.sql 2020-08-18 04:58 2.4K xenoMrna.sql 2020-08-18 04:58 2.4K intronEst.sql 2016-06-12 06:07 2.4K tableList.txt.gz 2021-06-06 11:27 3.4K tableDescriptions.txt.gz 2019-07-21 03:41 5.1K trackDb.txt.gz 2020-12-06 07:38 21K microsat.txt.gz 2015-08-23 09:54 52K scaffolds.txt.gz 2005-03-02 05:07 95K Group13_chainDm2.txt.gz 2006-11-04 07:08 112K Group16_chainDm2.txt.gz 2006-11-04 07:08 126K Group15_chainDm2.txt.gz 2006-11-04 07:08 139K Group12_chainDm2.txt.gz 2006-11-04 07:08 152K Group14_chainDm2.txt.gz 2006-11-04 07:08 154K Group9_chainDm2.txt.gz 2006-11-04 07:09 162K Group10_chainDm2.txt.gz 2006-11-04 07:08 176K gbDelete_tmp.txt.gz 2005-09-28 04:52 180K Group8_chainDm2.txt.gz 2006-11-04 07:09 184K gbLoaded.txt.gz 2020-08-18 05:22 202K gap.txt.gz 2005-02-23 16:08 212K Group4_chainDm2.txt.gz 2006-11-04 07:08 213K Group11_chainDm2.txt.gz 2006-11-04 07:08 225K Group6_chainDm2.txt.gz 2006-11-04 07:09 228K Group7_chainDm2.txt.gz 2006-11-04 07:09 231K Group2_chainDm2.txt.gz 2006-11-04 07:08 234K Group5_chainDm2.txt.gz 2006-11-04 07:09 243K gold.txt.gz 2005-02-23 16:08 282K Group3_chainDm2.txt.gz 2006-11-04 07:08 350K Group1_chainDm2.txt.gz 2006-11-04 07:08 384K brhInparalog.txt.gz 2005-06-10 04:24 547K modelRefGene.txt.gz 2005-06-10 04:24 774K augustusGene.txt.gz 2015-07-26 10:11 843K estOrientInfo.txt.gz 2016-06-12 06:06 866K genscan.txt.gz 2005-02-23 16:08 939K geneid.txt.gz 2006-01-19 05:51 971K blastDm2FB.txt.gz 2005-07-28 05:23 971K gc5Base.txt.gz 2005-02-23 16:08 1.1M Group13_chainDm2Link.txt.gz 2006-11-04 07:08 1.3M intronEst.txt.gz 2016-06-12 06:07 1.4M mrnaOrientInfo.txt.gz 2020-08-18 04:58 1.4M ensGene.txt.gz 2005-04-22 05:39 1.5M blastHg17KG.txt.gz 2005-03-30 05:40 1.6M Group16_chainDm2Link.txt.gz 2006-11-04 07:08 1.8M Group15_chainDm2Link.txt.gz 2006-11-04 07:08 1.9M Group14_chainDm2Link.txt.gz 2006-11-04 07:08 1.9M Group12_chainDm2Link.txt.gz 2006-11-04 07:08 2.0M Group9_chainDm2Link.txt.gz 2006-11-04 07:09 2.1M Group4_chainDm2Link.txt.gz 2006-11-04 07:08 2.5M simpleRepeat.txt.gz 2005-02-23 16:08 2.5M Group10_chainDm2Link.txt.gz 2006-11-04 07:08 2.5M Group8_chainDm2Link.txt.gz 2006-11-04 07:09 2.5M all_est.txt.gz 2016-06-12 06:06 2.9M ensPep.txt.gz 2005-04-22 05:39 2.9M GroupUn_chainDm2.txt.gz 2006-11-04 07:09 3.0M Group3_chainDm2Link.txt.gz 2006-11-04 07:08 3.0M Group6_chainDm2Link.txt.gz 2006-11-04 07:09 3.1M Group2_chainDm2Link.txt.gz 2006-11-04 07:08 3.1M Group7_chainDm2Link.txt.gz 2006-11-04 07:09 3.1M Group11_chainDm2Link.txt.gz 2006-11-04 07:08 3.4M Group5_chainDm2Link.txt.gz 2006-11-04 07:09 3.7M genscanPep.txt.gz 2005-02-23 16:08 4.3M xenoRefFlat.txt.gz 2020-08-18 05:07 5.2M Group1_chainDm2Link.txt.gz 2006-11-04 07:08 5.6M xenoRefSeqAli.txt.gz 2020-08-18 05:20 5.6M xenoRefGene.txt.gz 2020-08-18 05:07 5.8M all_mrna.txt.gz 2020-08-18 04:58 7.0M netDm2.txt.gz 2006-11-04 07:08 7.7M rmsk.txt.gz 2005-02-23 16:07 8.7M GroupUn_chainDm2Link.txt.gz 2006-11-04 07:09 61M xenoMrna.txt.gz 2020-08-18 04:58 145M