This directory contains a dump of the UCSC genome annotation database for
the Feb. 2007 assembly of the lizard genome (anoCar1, Broad Institute AnoCar (1.0)).
The annotations were generated by UCSC and collaborators worldwide.
This assembly was produced by the Broad Institute at MIT and Harvard.
For more information on the lizard genome, see the project website:
http://www.broad.mit.edu/models/anole/
Files included in this directory (updated nightly):
- *.sql files: the MySQL commands used to create the tables
- *.txt.gz files: the database tables in a tab-delimited format
compressed with gzip.
To see descriptions of the tables underlying Genome Browser annotation
tracks, select the table in the Table Browser:
http://genome.ucsc.edu/cgi-bin/hgTables?db=anoCar1
and click the "describe table schema" button. There is also a "view
table schema" link on the configuration page for each track.
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If you plan to download a large file or multiple files from this
directory, we recommend you use ftp rather than downloading the files
via our website. To do so, ftp to hgdownload.cse.ucsc.edu, then go to
the directory goldenPath/anoCar1/database/. To download multiple
files, use the "mget" command:
mget <filename1> <filename2> ...
- or -
mget -a (to download all the files in the directory)
Name Last modified Size Description
Parent Directory -
chainXenTro2Link.txt.gz 2007-05-21 14:37 702M
xenoMrna.txt.gz 2016-02-21 09:22 226M
chainHg19Link.txt.gz 2009-10-11 04:46 213M
chainOrnAna1Link.txt.gz 2007-06-01 12:37 183M
chainMm9Link.txt.gz 2007-10-18 17:32 144M
chainGasAcu1Link.txt.gz 2007-05-21 14:18 77M
chainHg19.txt.gz 2009-10-11 04:45 58M
chainXenTro2.txt.gz 2007-05-21 14:28 57M
windowmaskerSdust.txt.gz 2007-05-21 14:50 54M
chainGalGal3Link.txt.gz 2007-05-21 14:16 53M
chainOrnAna1.txt.gz 2007-06-01 12:33 48M
quality.txt.gz 2007-05-21 14:49 33M
xenoRefGene.txt.gz 2020-08-20 19:42 30M
xenoRefSeqAli.txt.gz 2020-08-20 19:42 27M
xenoRefFlat.txt.gz 2020-08-20 19:42 27M
rmsk.txt.gz 2007-05-21 14:49 20M
chainMm9.txt.gz 2007-10-18 17:36 15M
simpleRepeat.txt.gz 2007-05-21 14:50 14M
chainGasAcu1.txt.gz 2007-05-21 14:17 12M
netGalGal3.txt.gz 2007-05-21 14:47 9.9M
netOrnAna1.txt.gz 2007-06-01 12:41 9.7M
netHg19.txt.gz 2009-10-11 04:45 9.3M
netMm9.txt.gz 2007-10-18 17:36 8.6M
chainGalGal3.txt.gz 2007-05-21 14:15 8.3M
netXenTro2.txt.gz 2007-05-21 14:48 7.7M
gc5Base.txt.gz 2007-05-21 14:46 7.0M
netGasAcu1.txt.gz 2007-05-21 14:47 6.0M
genscanPep.txt.gz 2007-05-21 14:47 5.9M
ensPep.txt.gz 2010-08-29 10:49 4.7M
genscanSubopt.txt.gz 2007-05-21 14:47 3.4M
blastHg18KG.txt.gz 2009-12-20 10:09 2.8M
augustusGene.txt.gz 2015-07-26 09:51 1.9M
ensGene.txt.gz 2010-08-29 10:49 1.7M
genscan.txt.gz 2007-05-21 14:47 1.6M
microsat.txt.gz 2015-08-23 09:29 958K
gold.txt.gz 2007-05-21 14:47 796K
gap.txt.gz 2007-05-21 14:45 549K
ensGtp.txt.gz 2010-08-29 10:49 206K
chromInfo.txt.gz 2007-05-21 14:45 39K
trackDb.txt.gz 2023-03-28 13:46 21K
trackDb_pushedout.txt.gz 2021-12-27 12:22 21K
gbLoaded.txt.gz 2020-08-20 19:42 15K
all_mrna.txt.gz 2019-05-26 04:24 11K
tableDescriptions.txt.gz 2024-04-27 02:03 5.1K
tableList.txt.gz 2024-04-28 03:14 3.2K
mrnaOrientInfo.txt.gz 2019-05-26 04:24 3.1K
netHg19.sql 2009-10-11 04:45 2.3K
blastHg18KG.sql 2009-12-20 10:09 2.3K
netXenTro2.sql 2007-05-21 14:48 2.2K
netOrnAna1.sql 2007-06-01 12:40 2.2K
netGasAcu1.sql 2007-05-21 14:47 2.2K
netGalGal3.sql 2007-05-21 14:47 2.2K
netMm9.sql 2007-10-18 17:36 2.2K
xenoRefSeqAli.sql 2020-08-20 19:42 2.1K
xenoMrna.sql 2016-02-21 09:21 2.1K
all_mrna.sql 2019-05-26 04:24 2.1K
trackDb_pushedout.sql 2021-12-27 12:22 2.1K
trackDb.sql 2023-03-28 13:46 2.1K
xenoRefGene.sql 2020-08-20 19:42 2.0K
augustusGene.sql 2015-07-26 09:51 1.9K
simpleRepeat.sql 2007-05-21 14:49 1.9K
rmsk.sql 2007-05-21 14:49 1.9K
ensGene.sql 2010-08-29 10:49 1.9K
hgFindSpec_pushedout.sql 2021-12-27 12:22 1.8K
mrnaOrientInfo.sql 2019-05-26 04:24 1.8K
chainHg19.sql 2009-10-11 04:45 1.8K
hgFindSpec.sql 2023-03-28 13:46 1.8K
xenoRefFlat.sql 2020-08-20 19:42 1.7K
quality.sql 2007-05-21 14:48 1.7K
gc5Base.sql 2007-05-21 14:46 1.7K
chainXenTro2.sql 2007-05-21 14:27 1.7K
chainOrnAna1.sql 2007-06-01 12:33 1.7K
chainGasAcu1.sql 2007-05-21 14:16 1.7K
chainGalGal3.sql 2007-05-21 14:15 1.7K
chainMm9.sql 2007-10-18 17:36 1.6K
gbLoaded.sql 2020-08-20 19:42 1.6K
gold.sql 2007-05-21 14:47 1.6K
tableList.sql 2024-04-28 03:14 1.6K
genscan.sql 2007-05-21 14:47 1.6K
chainHg19Link.sql 2009-10-11 04:45 1.5K
gap.sql 2007-05-21 14:45 1.5K
microsat.sql 2015-08-23 09:29 1.5K
tableDescriptions.sql 2024-04-27 02:03 1.5K
genscanSubopt.sql 2007-05-21 14:47 1.5K
chainXenTro2Link.sql 2007-05-21 14:28 1.4K
chainOrnAna1Link.sql 2007-06-01 12:34 1.4K
chainGasAcu1Link.sql 2007-05-21 14:17 1.4K
chainGalGal3Link.sql 2007-05-21 14:15 1.4K
chainMm9Link.sql 2007-10-18 17:29 1.4K
history.sql 2007-05-21 14:47 1.4K
bigFiles.sql 2024-04-28 03:14 1.4K
grp.sql 2014-03-02 03:37 1.4K
ensGtp.sql 2010-08-29 10:49 1.4K
windowmaskerSdust.sql 2007-05-21 14:50 1.3K
ensPep.sql 2010-08-29 10:49 1.3K
chromInfo.sql 2007-05-21 14:45 1.2K
genscanPep.sql 2007-05-21 14:47 1.2K
hgFindSpec.txt.gz 2023-03-28 13:46 794
hgFindSpec_pushedout.txt.gz 2021-12-27 12:22 754
history.txt.gz 2007-05-21 14:47 597
grp.txt.gz 2014-03-02 03:37 208
bigFiles.txt.gz 2024-04-28 03:14 33