# Track for EVA snp release 6  - https://www.ebi.ac.uk/eva/?RS-Release&releaseVersion=6
# Tracks built by Lou on 7/24/2024

# Track was built for the following 37 assemblies

# The GCA accession on the eva release by accession list (https://ftp.ebi.ac.uk/pub/databases/eva/rs_releases/release_3/by_assembly/)
# were compared to all native assemblies we have. In total there are 784,754,786 variants

# All assemblies were passed by the python pipeline described below
# Some assemblies had errors and were skipped, more info in RM #34119

# All files were created with the following python3 script:

~/kent/src/hg/makeDb/scripts/evaSnp/evaSnp6.py

#Then symlinks were made for all databases

for dbs in $(cat /hive/data/outside/eva6/assemblyReleaseList.txt);
do
ln -s /hive/data/outside/eva6/$dbs/evaSnp6.bb /gbdb/$dbs/bbi/;
done
       
