Description

This track shows mutations in Nextstrain data from April 19th, 2020 that appear to have occurred in multiple branches of the phylogenetic tree but have been reported exclusively (or almost exclusively) by a single lab.

Methods

... GISAID metadata cleanup ... ... https://github.com/lgozasht/COVID-19-Lab-Specific-Bias-Filter/ ...

Data Access

You can download the bigWig file underlying this track (labAssocMuts419.bb) from our Download Server. The data can be explored interactively with the Table Browser or the Data Integrator.

References

Turakhia Y, Thornlow B, Gozashti L, Hinrichs AS, Fernandes JD, Haussler D, Corbett-Detig R. Stability of SARS-CoV-2 Phylogenies bioRxiv preprint (submitted to PLoS Genetics for peer review)